Query psy8733
Match_columns 621
No_of_seqs 404 out of 2484
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 17:50:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8733.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8733hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e77_A Phosphoserine aminotran 100.0 3.9E-61 1.3E-65 517.3 30.0 361 52-610 14-376 (377)
2 3m5u_A Phosphoserine aminotran 100.0 2.7E-59 9.2E-64 500.2 36.6 357 50-610 4-361 (361)
3 3qm2_A Phosphoserine aminotran 100.0 4.3E-59 1.5E-63 502.8 26.6 357 51-610 27-386 (386)
4 2c0r_A PSAT, phosphoserine ami 100.0 2.2E-38 7.5E-43 332.2 35.1 359 50-609 3-361 (362)
5 1w23_A Phosphoserine aminotran 100.0 8.6E-33 3E-37 288.2 34.9 283 50-416 2-284 (360)
6 3ffr_A Phosphoserine aminotran 100.0 1.9E-31 6.3E-36 277.0 31.8 340 51-606 4-361 (362)
7 2fyf_A PSAT, phosphoserine ami 100.0 2E-28 6.7E-33 260.9 35.7 271 50-419 39-323 (398)
8 3f0h_A Aminotransferase; RER07 100.0 4.3E-29 1.5E-33 261.7 28.7 268 50-414 18-298 (376)
9 3kgw_A Alanine-glyoxylate amin 100.0 2.2E-26 7.4E-31 241.5 30.3 270 50-419 22-311 (393)
10 3zrp_A Serine-pyruvate aminotr 100.0 8E-27 2.7E-31 244.0 26.4 267 52-419 3-290 (384)
11 2z9v_A Aspartate aminotransfer 100.0 3.3E-26 1.1E-30 241.1 31.2 275 45-418 3-293 (392)
12 3nnk_A Ureidoglycine-glyoxylat 100.0 1.8E-26 6.3E-31 244.2 29.0 269 50-418 12-313 (411)
13 2huf_A Alanine glyoxylate amin 99.9 1E-25 3.5E-30 237.4 31.3 269 50-418 18-306 (393)
14 1iug_A Putative aspartate amin 99.9 2.7E-25 9.1E-30 230.1 31.3 260 53-418 3-275 (352)
15 3isl_A Purine catabolism prote 99.9 1.9E-25 6.4E-30 236.9 28.8 270 50-419 10-314 (416)
16 3ke3_A Putative serine-pyruvat 99.9 4.5E-26 1.5E-30 242.0 23.6 259 87-429 26-308 (379)
17 2ch1_A 3-hydroxykynurenine tra 99.9 5.8E-25 2E-29 231.9 30.5 270 50-419 17-306 (396)
18 2dr1_A PH1308 protein, 386AA l 99.9 1.5E-24 5.3E-29 227.2 29.3 285 27-418 6-304 (386)
19 2bkw_A Alanine-glyoxylate amin 99.9 4.9E-25 1.7E-29 230.9 25.2 271 50-419 4-306 (385)
20 2yrr_A Aminotransferase, class 99.9 4.5E-25 1.5E-29 227.7 24.4 265 52-419 1-279 (353)
21 1m32_A 2-aminoethylphosphonate 99.9 1.4E-24 4.8E-29 225.1 24.8 270 51-418 4-289 (366)
22 4hvk_A Probable cysteine desul 99.9 2.2E-23 7.6E-28 216.9 29.2 269 52-419 2-281 (382)
23 1vjo_A Alanine--glyoxylate ami 99.9 2.6E-23 8.9E-28 219.4 29.2 269 50-418 33-318 (393)
24 3cai_A Possible aminotransfera 99.9 1.7E-22 5.8E-27 214.1 31.3 277 51-419 27-328 (406)
25 1kmj_A Selenocysteine lyase; p 99.9 1.7E-22 5.7E-27 212.8 31.0 278 50-418 23-325 (406)
26 1elu_A L-cysteine/L-cystine C- 99.9 2.3E-22 7.7E-27 211.0 31.6 282 50-419 16-322 (390)
27 4eb5_A Probable cysteine desul 99.9 1.3E-22 4.3E-27 212.3 28.0 269 52-419 2-281 (382)
28 1t3i_A Probable cysteine desul 99.9 4.8E-22 1.6E-26 210.6 32.2 300 26-418 8-329 (420)
29 1qz9_A Kynureninase; kynurenin 99.9 8E-22 2.7E-26 209.6 25.5 275 45-418 23-332 (416)
30 1eg5_A Aminotransferase; PLP-d 99.9 1.1E-20 3.7E-25 197.5 30.7 268 52-418 3-283 (384)
31 3lvm_A Cysteine desulfurase; s 99.9 2.4E-21 8.2E-26 206.3 26.0 281 50-420 22-310 (423)
32 3e9k_A Kynureninase; kynurenin 99.9 2.2E-22 7.4E-27 219.0 18.2 275 50-413 67-375 (465)
33 3vax_A Putative uncharacterize 99.9 2E-21 7E-26 205.0 24.3 276 50-419 20-308 (400)
34 3a9z_A Selenocysteine lyase; P 99.8 5.7E-20 1.9E-24 196.8 23.5 288 45-416 13-328 (432)
35 3f9t_A TDC, L-tyrosine decarbo 99.8 3E-17 1E-21 171.4 25.7 269 54-417 34-331 (397)
36 2e7j_A SEP-tRNA:Cys-tRNA synth 99.8 6E-18 2.1E-22 176.4 18.9 267 50-418 8-292 (371)
37 1wyu_A Glycine dehydrogenase ( 99.7 1.9E-16 6.4E-21 171.2 26.1 270 51-419 65-369 (438)
38 2dgk_A GAD-beta, GADB, glutama 99.7 1.4E-15 4.9E-20 165.0 27.4 146 270-419 184-352 (452)
39 3hbx_A GAD 1, glutamate decarb 99.7 6E-15 2.1E-19 163.2 31.9 279 52-420 58-368 (502)
40 2fnu_A Aminotransferase; prote 99.7 3.6E-15 1.2E-19 155.6 27.1 245 59-419 8-273 (375)
41 3ffh_A Histidinol-phosphate am 99.7 3.1E-15 1.1E-19 156.1 26.0 248 51-417 33-299 (363)
42 2qma_A Diaminobutyrate-pyruvat 99.6 1.1E-14 3.8E-19 160.2 24.0 282 50-419 100-419 (497)
43 3mc6_A Sphingosine-1-phosphate 99.6 9.7E-14 3.3E-18 152.0 31.4 147 270-419 203-371 (497)
44 1rv3_A Serine hydroxymethyltra 99.6 2.3E-15 7.8E-20 165.7 18.0 141 272-418 192-348 (483)
45 2jis_A Cysteine sulfinic acid 99.6 2.8E-14 9.5E-19 157.9 25.2 147 273-420 259-427 (515)
46 1svv_A Threonine aldolase; str 99.6 2.1E-15 7.1E-20 155.9 15.1 260 50-417 14-290 (359)
47 3get_A Histidinol-phosphate am 99.6 4.6E-14 1.6E-18 147.3 25.0 246 52-417 32-300 (365)
48 3ly1_A Putative histidinol-pho 99.6 4.3E-14 1.5E-18 146.7 24.5 244 51-413 17-283 (354)
49 3euc_A Histidinol-phosphate am 99.6 3E-14 1E-18 148.8 22.5 251 50-417 30-300 (367)
50 2z67_A O-phosphoseryl-tRNA(SEC 99.6 1.3E-15 4.6E-20 166.0 12.0 266 50-414 80-370 (456)
51 3hdo_A Histidinol-phosphate am 99.6 9.9E-14 3.4E-18 144.9 25.7 246 52-417 28-287 (360)
52 3mad_A Sphingosine-1-phosphate 99.6 1.2E-13 3.9E-18 152.5 27.4 146 270-418 236-401 (514)
53 4e1o_A HDC, histidine decarbox 99.6 5.2E-14 1.8E-18 154.7 23.7 144 274-419 242-405 (481)
54 3dyd_A Tyrosine aminotransfera 99.6 9.9E-14 3.4E-18 149.2 25.3 247 60-417 70-347 (427)
55 3g0t_A Putative aminotransfera 99.6 3.8E-14 1.3E-18 151.5 21.1 147 271-418 180-358 (437)
56 3b8x_A WBDK, pyridoxamine 5-ph 99.6 2.4E-13 8.1E-18 143.8 26.6 253 53-419 4-295 (390)
57 3uwc_A Nucleotide-sugar aminot 99.6 9E-14 3.1E-18 145.4 23.0 254 51-418 7-274 (374)
58 2okj_A Glutamate decarboxylase 99.6 1.3E-13 4.5E-18 151.8 25.4 140 273-419 245-411 (504)
59 3frk_A QDTB; aminotransferase, 99.6 6.3E-15 2.2E-19 154.8 14.2 249 52-414 5-268 (373)
60 1gd9_A Aspartate aminotransfer 99.6 3.5E-13 1.2E-17 141.8 27.4 135 270-417 157-311 (389)
61 1fc4_A 2-amino-3-ketobutyrate 99.6 8E-14 2.7E-18 147.4 22.4 127 273-413 177-319 (401)
62 3vp6_A Glutamate decarboxylase 99.6 7.4E-14 2.5E-18 154.9 22.9 145 274-420 249-415 (511)
63 2a7v_A Serine hydroxymethyltra 99.6 8.6E-15 2.9E-19 162.2 15.3 283 51-418 55-358 (490)
64 2w8t_A SPT, serine palmitoyltr 99.6 2.6E-13 8.8E-18 146.0 26.4 130 273-417 194-338 (427)
65 3kax_A Aminotransferase, class 99.6 4.7E-14 1.6E-18 147.5 19.8 259 51-417 25-310 (383)
66 3dr4_A Putative perosamine syn 99.6 5.2E-14 1.8E-18 148.7 20.2 257 51-419 23-293 (391)
67 3dzz_A Putative pyridoxal 5'-p 99.6 6E-14 2E-18 147.1 20.3 133 272-417 159-314 (391)
68 2vi8_A Serine hydroxymethyltra 99.6 1.7E-14 5.7E-19 152.3 15.9 130 273-418 163-303 (405)
69 4dq6_A Putative pyridoxal phos 99.6 1.3E-13 4.3E-18 144.6 21.8 249 61-417 45-318 (391)
70 3h14_A Aminotransferase, class 99.6 1.7E-13 5.7E-18 144.6 22.5 127 273-414 161-303 (391)
71 3nyt_A Aminotransferase WBPE; 99.6 7.5E-14 2.6E-18 146.6 19.5 248 53-414 5-267 (367)
72 2oga_A Transaminase; PLP-depen 99.6 6.7E-14 2.3E-18 148.9 19.1 254 51-418 31-299 (399)
73 3k40_A Aromatic-L-amino-acid d 99.6 1.2E-13 4E-18 151.8 21.6 145 274-420 235-399 (475)
74 3p1t_A Putative histidinol-pho 99.6 1.2E-12 4.2E-17 134.5 27.9 238 52-413 19-268 (337)
75 1js3_A DDC;, DOPA decarboxylas 99.6 1.6E-13 5.5E-18 150.2 22.5 142 275-419 237-401 (486)
76 1v2d_A Glutamine aminotransfer 99.6 1.7E-13 5.9E-18 144.0 21.9 243 61-413 38-297 (381)
77 3a2b_A Serine palmitoyltransfe 99.6 2.4E-13 8.3E-18 143.7 22.9 127 273-413 173-314 (398)
78 1bs0_A Protein (8-amino-7-oxon 99.5 2.8E-13 9.5E-18 142.3 21.9 130 273-414 168-310 (384)
79 3tqx_A 2-amino-3-ketobutyrate 99.5 2.8E-13 9.5E-18 142.4 21.5 129 273-414 175-319 (399)
80 1o69_A Aminotransferase; struc 99.5 1.5E-13 5.3E-18 146.0 19.6 241 61-413 9-266 (394)
81 1wyu_B Glycine dehydrogenase s 99.5 1.1E-12 3.6E-17 143.8 26.6 142 270-417 200-366 (474)
82 3nra_A Aspartate aminotransfer 99.5 9.7E-14 3.3E-18 146.5 16.9 264 52-417 41-330 (407)
83 1lc5_A COBD, L-threonine-O-3-p 99.5 4.6E-13 1.6E-17 140.0 21.4 131 270-417 143-291 (364)
84 1b9h_A AHBA synthase, protein 99.5 7.1E-13 2.4E-17 139.6 22.8 249 62-419 15-279 (388)
85 1bw0_A TAT, protein (tyrosine 99.5 3.2E-13 1.1E-17 143.6 19.1 138 270-417 174-336 (416)
86 3fdb_A Beta C-S lyase, putativ 99.5 3.7E-13 1.3E-17 140.6 19.1 249 51-417 24-302 (377)
87 1v72_A Aldolase; PLP-dependent 99.5 3.2E-13 1.1E-17 139.5 18.3 130 273-417 141-287 (356)
88 3n0l_A Serine hydroxymethyltra 99.5 2.7E-13 9.2E-18 143.6 17.4 130 272-417 163-304 (417)
89 2dkj_A Serine hydroxymethyltra 99.5 8.9E-14 3E-18 146.8 13.5 129 273-417 163-303 (407)
90 2x5d_A Probable aminotransfera 99.5 2.2E-12 7.5E-17 137.3 23.3 129 271-413 170-318 (412)
91 1j32_A Aspartate aminotransfer 99.5 2.9E-12 9.8E-17 134.8 23.8 134 270-417 160-314 (388)
92 3e77_A Phosphoserine aminotran 99.5 1.6E-14 5.4E-19 155.1 6.6 103 449-551 198-300 (377)
93 1pff_A Methionine gamma-lyase; 99.5 2E-12 6.7E-17 133.3 21.6 126 270-413 80-217 (331)
94 2c81_A Glutamine-2-deoxy-scyll 99.5 3.7E-12 1.3E-16 136.0 24.4 263 57-419 9-292 (418)
95 3ecd_A Serine hydroxymethyltra 99.5 6.8E-13 2.3E-17 140.6 18.4 128 272-414 171-310 (425)
96 1b5p_A Protein (aspartate amin 99.5 2.8E-12 9.6E-17 135.5 22.7 133 270-417 161-313 (385)
97 3asa_A LL-diaminopimelate amin 99.5 2.5E-12 8.4E-17 136.6 22.3 132 272-413 162-315 (400)
98 1mdo_A ARNB aminotransferase; 99.5 3.5E-12 1.2E-16 134.1 23.0 250 53-418 11-284 (393)
99 3l8a_A METC, putative aminotra 99.5 6.2E-13 2.1E-17 142.4 17.3 260 51-417 62-347 (421)
100 3fkd_A L-threonine-O-3-phospha 99.5 4.6E-12 1.6E-16 131.6 23.3 240 51-418 16-272 (350)
101 1u08_A Hypothetical aminotrans 99.5 1.8E-12 6E-17 136.5 20.1 130 270-413 160-309 (386)
102 3cq5_A Histidinol-phosphate am 99.5 5.6E-12 1.9E-16 132.3 23.7 124 273-413 164-301 (369)
103 3ftb_A Histidinol-phosphate am 99.5 5.1E-12 1.7E-16 131.2 23.1 243 51-417 27-290 (361)
104 2bwn_A 5-aminolevulinate synth 99.5 1.7E-12 5.7E-17 137.4 19.7 133 272-417 177-324 (401)
105 2z61_A Probable aspartate amin 99.5 3.4E-12 1.2E-16 133.5 20.9 131 270-413 151-296 (370)
106 1o4s_A Aspartate aminotransfer 99.5 4.4E-12 1.5E-16 134.1 22.0 130 270-417 171-319 (389)
107 1xi9_A Putative transaminase; 99.4 3.6E-12 1.2E-16 135.4 21.0 133 270-417 171-327 (406)
108 2o0r_A RV0858C (N-succinyldiam 99.4 1.2E-12 4E-17 139.4 17.0 133 270-417 157-309 (411)
109 3h7f_A Serine hydroxymethyltra 99.4 1.1E-12 3.8E-17 142.3 16.8 128 273-413 185-321 (447)
110 3qgu_A LL-diaminopimelate amin 99.4 2.2E-12 7.7E-17 138.8 19.1 138 272-414 208-365 (449)
111 3op7_A Aminotransferase class 99.4 1.3E-11 4.3E-16 129.3 23.3 134 270-417 151-299 (375)
112 1c7n_A Cystalysin; transferase 99.4 1E-11 3.6E-16 131.0 22.6 133 272-417 163-318 (399)
113 2gb3_A Aspartate aminotransfer 99.4 9.3E-12 3.2E-16 132.5 21.3 132 270-417 171-320 (409)
114 2dou_A Probable N-succinyldiam 99.4 1.8E-11 6.3E-16 128.3 23.1 129 271-413 156-303 (376)
115 3gbx_A Serine hydroxymethyltra 99.4 1.6E-12 5.4E-17 137.6 15.0 127 273-414 169-309 (420)
116 1fg7_A Histidinol phosphate am 99.4 7.5E-12 2.6E-16 131.1 19.5 127 273-415 146-288 (356)
117 3fvs_A Kynurenine--oxoglutarat 99.4 2.3E-11 7.9E-16 129.3 23.5 133 270-414 171-328 (422)
118 3e2y_A Kynurenine-oxoglutarate 99.4 4E-12 1.4E-16 134.5 17.4 133 270-414 164-321 (410)
119 3ele_A Amino transferase; RER0 99.4 4.4E-12 1.5E-16 133.8 17.6 132 270-413 169-323 (398)
120 2eh6_A Acoat, acetylornithine 99.4 1.9E-11 6.5E-16 127.7 20.6 125 270-414 169-310 (375)
121 3m5u_A Phosphoserine aminotran 99.4 3.8E-13 1.3E-17 143.5 7.6 104 448-551 184-288 (361)
122 1yiz_A Kynurenine aminotransfe 99.4 3.4E-11 1.2E-15 128.7 22.2 132 270-413 179-335 (429)
123 3ezs_A Aminotransferase ASPB; 99.4 3.2E-11 1.1E-15 126.0 21.0 126 271-411 152-301 (376)
124 2zyj_A Alpha-aminodipate amino 99.4 5E-12 1.7E-16 133.7 14.7 127 273-413 162-311 (397)
125 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.4 1.1E-10 3.7E-15 125.8 25.2 139 270-420 155-334 (437)
126 2x3l_A ORN/Lys/Arg decarboxyla 99.3 1.7E-12 5.9E-17 141.3 10.9 128 270-409 143-283 (446)
127 1uu1_A Histidinol-phosphate am 99.3 1.2E-11 4.1E-16 128.0 15.9 127 272-417 137-275 (335)
128 3jtx_A Aminotransferase; NP_28 99.3 7.6E-11 2.6E-15 124.1 22.3 129 270-413 165-317 (396)
129 1c4k_A Protein (ornithine deca 99.3 2.6E-11 8.9E-16 140.2 20.3 140 275-420 283-446 (730)
130 3ei9_A LL-diaminopimelate amin 99.3 9E-11 3.1E-15 125.7 23.2 139 271-414 196-353 (432)
131 3ju7_A Putative PLP-dependent 99.3 1.7E-11 5.7E-16 130.6 17.3 244 61-416 13-274 (377)
132 1d2f_A MALY protein; aminotran 99.3 2.6E-11 8.9E-16 127.7 18.5 131 273-417 162-314 (390)
133 2o1b_A Aminotransferase, class 99.3 2.6E-11 9E-16 129.2 18.4 132 271-417 179-329 (404)
134 1vef_A Acetylornithine/acetyl- 99.3 4.1E-11 1.4E-15 126.5 19.6 127 270-414 182-325 (395)
135 2vyc_A Biodegradative arginine 99.3 1.3E-11 4.4E-16 143.4 17.2 132 273-415 312-466 (755)
136 2ay1_A Aroat, aromatic amino a 99.3 1.6E-11 5.3E-16 129.4 15.6 133 273-414 169-330 (394)
137 2po3_A 4-dehydrase; external a 99.3 2E-10 6.9E-15 123.0 24.3 138 270-419 135-286 (424)
138 1gc0_A Methionine gamma-lyase; 99.3 4.9E-11 1.7E-15 127.2 19.1 129 270-415 147-285 (398)
139 1vp4_A Aminotransferase, putat 99.3 2.3E-11 8E-16 130.3 16.6 127 273-413 187-334 (425)
140 3qm2_A Phosphoserine aminotran 99.3 7.6E-13 2.6E-17 142.3 5.0 102 449-551 213-314 (386)
141 3ruy_A Ornithine aminotransfer 99.3 1.3E-10 4.5E-15 122.4 21.9 127 270-414 179-323 (392)
142 3kki_A CAI-1 autoinducer synth 99.3 3.5E-11 1.2E-15 127.9 17.5 127 273-414 186-328 (409)
143 3aow_A Putative uncharacterize 99.3 2E-10 6.9E-15 124.8 23.4 126 273-413 216-363 (448)
144 2zc0_A Alanine glyoxylate tran 99.3 1E-10 3.4E-15 123.7 20.2 131 272-416 173-326 (407)
145 1cs1_A CGS, protein (cystathio 99.3 3.5E-11 1.2E-15 127.2 16.5 126 271-415 135-271 (386)
146 2fq6_A Cystathionine beta-lyas 99.3 5E-11 1.7E-15 129.0 16.7 126 270-415 164-302 (415)
147 1jg8_A L-ALLO-threonine aldola 99.2 8.1E-11 2.8E-15 121.6 15.8 75 273-348 132-223 (347)
148 3b46_A Aminotransferase BNA3; 99.2 9.6E-11 3.3E-15 126.8 15.1 133 270-414 198-351 (447)
149 3rq1_A Aminotransferase class 99.2 1.6E-10 5.4E-15 123.1 15.7 131 273-413 178-348 (418)
150 2r2n_A Kynurenine/alpha-aminoa 99.2 1.7E-09 5.7E-14 116.0 23.6 132 272-416 189-344 (425)
151 2rfv_A Methionine gamma-lyase; 99.2 3E-10 1E-14 120.7 16.6 128 270-414 146-283 (398)
152 2cb1_A O-acetyl homoserine sul 99.2 8.4E-10 2.9E-14 118.2 20.2 74 270-343 137-219 (412)
153 1ajs_A Aspartate aminotransfer 99.2 1.2E-10 4E-15 123.7 13.1 134 272-414 182-345 (412)
154 4adb_A Succinylornithine trans 99.2 8.5E-10 2.9E-14 116.4 19.5 126 270-414 180-323 (406)
155 2x5f_A Aspartate_tyrosine_phen 99.2 2.1E-10 7.1E-15 122.7 15.0 129 273-412 189-353 (430)
156 1qgn_A Protein (cystathionine 99.2 1.9E-10 6.5E-15 125.8 14.9 127 270-416 196-334 (445)
157 3fsl_A Aromatic-amino-acid ami 99.2 3.2E-10 1.1E-14 119.3 16.0 261 53-414 36-334 (397)
158 2ord_A Acoat, acetylornithine 99.2 7.2E-10 2.5E-14 117.1 18.4 125 270-413 180-321 (397)
159 1iay_A ACC synthase 2, 1-amino 99.2 3.2E-10 1.1E-14 121.2 15.7 129 272-416 187-345 (428)
160 3qhx_A Cystathionine gamma-syn 99.2 3.8E-10 1.3E-14 120.5 15.9 128 270-416 148-286 (392)
161 1s0a_A Adenosylmethionine-8-am 99.1 2E-09 7E-14 115.1 21.4 129 272-413 203-350 (429)
162 3tcm_A Alanine aminotransferas 99.1 1.2E-09 4E-14 120.6 20.0 131 273-419 237-409 (500)
163 2aeu_A Hypothetical protein MJ 99.1 1.9E-10 6.3E-15 122.0 12.8 103 271-386 138-254 (374)
164 3piu_A 1-aminocyclopropane-1-c 99.1 6.2E-10 2.1E-14 119.4 16.9 127 272-414 190-349 (435)
165 1yaa_A Aspartate aminotransfer 99.1 2.7E-10 9.3E-15 121.0 13.9 128 274-414 177-345 (412)
166 3a8u_X Omega-amino acid--pyruv 99.1 3.7E-10 1.2E-14 121.8 15.2 133 272-414 218-369 (449)
167 1n8p_A Cystathionine gamma-lya 99.1 1.2E-10 4.2E-15 124.4 11.2 126 270-414 135-275 (393)
168 4f4e_A Aromatic-amino-acid ami 99.1 1.5E-09 5.1E-14 116.1 17.3 133 272-413 194-355 (420)
169 1sff_A 4-aminobutyrate aminotr 99.1 6E-09 2.1E-13 110.7 21.9 123 272-413 198-338 (426)
170 3g7q_A Valine-pyruvate aminotr 99.1 2.6E-09 8.9E-14 113.0 18.1 128 268-412 175-324 (417)
171 3t18_A Aminotransferase class 99.1 8.9E-10 3E-14 117.0 14.4 131 273-413 177-346 (413)
172 2q7w_A Aspartate aminotransfer 99.1 1.2E-09 4.1E-14 114.8 15.2 133 273-414 172-333 (396)
173 2oat_A Ornithine aminotransfer 99.1 1.5E-08 5E-13 109.8 23.9 124 271-413 221-363 (439)
174 3if2_A Aminotransferase; YP_26 99.1 9.3E-10 3.2E-14 118.0 14.2 78 270-348 203-297 (444)
175 3jzl_A Putative cystathionine 99.1 1.5E-09 5.1E-14 117.5 15.8 134 270-420 156-307 (409)
176 1e5e_A MGL, methionine gamma-l 99.1 7.1E-09 2.4E-13 111.0 21.0 126 270-414 144-282 (404)
177 3bwn_A AT1G70560, L-tryptophan 99.1 1.9E-09 6.4E-14 114.8 16.2 132 272-417 156-305 (391)
178 2pb2_A Acetylornithine/succiny 99.0 5.9E-09 2E-13 111.9 19.4 125 270-413 198-340 (420)
179 3nx3_A Acoat, acetylornithine 99.0 1.7E-08 5.9E-13 106.4 22.3 125 270-412 176-318 (395)
180 1z7d_A Ornithine aminotransfer 99.0 6.2E-08 2.1E-12 104.6 26.6 124 271-413 210-352 (433)
181 3cog_A Cystathionine gamma-lya 99.0 3.3E-09 1.1E-13 113.8 16.3 126 270-414 148-285 (403)
182 3acz_A Methionine gamma-lyase; 99.0 4.7E-09 1.6E-13 111.6 17.2 126 270-414 141-277 (389)
183 3ez1_A Aminotransferase MOCR f 99.0 6.3E-08 2.1E-12 103.1 25.8 78 271-348 170-274 (423)
184 2ctz_A O-acetyl-L-homoserine s 99.0 4E-09 1.4E-13 113.6 16.1 71 270-341 141-221 (421)
185 3meb_A Aspartate aminotransfer 99.0 5.3E-09 1.8E-13 113.3 17.0 129 272-413 201-371 (448)
186 3ndn_A O-succinylhomoserine su 99.0 2.4E-09 8.3E-14 115.6 14.2 128 270-416 163-301 (414)
187 1ax4_A Tryptophanase; tryptoph 99.0 3.8E-09 1.3E-13 114.0 15.2 128 273-412 183-341 (467)
188 3dxv_A Alpha-amino-epsilon-cap 99.0 1.6E-08 5.5E-13 108.5 18.7 123 271-413 199-339 (439)
189 7aat_A Aspartate aminotransfer 98.9 2.2E-08 7.4E-13 105.7 18.7 262 52-414 37-337 (401)
190 1zod_A DGD, 2,2-dialkylglycine 98.9 2.9E-08 9.8E-13 106.2 19.5 126 272-413 202-344 (433)
191 2oqx_A Tryptophanase; lyase, p 98.9 1.2E-08 4.2E-13 110.0 16.2 133 272-413 182-344 (467)
192 3i16_A Aluminum resistance pro 98.9 1.2E-08 4.2E-13 110.9 16.3 132 272-420 175-324 (427)
193 3ppl_A Aspartate aminotransfer 98.9 7.1E-08 2.4E-12 103.0 21.7 78 271-348 178-281 (427)
194 3ihj_A Alanine aminotransferas 98.9 8.3E-08 2.8E-12 105.9 21.6 130 273-418 235-407 (498)
195 3ht4_A Aluminum resistance pro 98.9 7E-09 2.4E-13 112.8 12.4 133 270-421 162-314 (431)
196 3f6t_A Aspartate aminotransfer 98.9 9.9E-08 3.4E-12 106.2 21.7 142 270-411 241-431 (533)
197 3hvy_A Cystathionine beta-lyas 98.9 1.5E-08 5.3E-13 110.2 14.7 130 272-420 175-324 (427)
198 3ri6_A O-acetylhomoserine sulf 98.9 3E-08 1E-12 107.8 16.5 139 270-416 164-322 (430)
199 3pj0_A LMO0305 protein; struct 98.9 3.6E-09 1.2E-13 109.7 8.4 131 271-418 135-282 (359)
200 1ibj_A CBL, cystathionine beta 98.8 2.4E-08 8.4E-13 109.5 15.0 78 270-348 214-302 (464)
201 2eo5_A 419AA long hypothetical 98.8 2.6E-07 8.8E-12 98.8 21.0 119 273-413 212-348 (419)
202 2cjg_A L-lysine-epsilon aminot 98.8 1.2E-07 4E-12 102.9 17.7 127 271-413 229-371 (449)
203 3d6k_A Putative aminotransfera 98.8 5.8E-07 2E-11 96.0 21.8 125 273-412 178-332 (422)
204 3lws_A Aromatic amino acid bet 98.7 6.2E-08 2.1E-12 100.4 13.6 129 273-418 135-280 (357)
205 3n75_A LDC, lysine decarboxyla 98.7 3.4E-08 1.2E-12 113.9 12.6 126 275-415 299-444 (715)
206 3i4j_A Aminotransferase, class 98.7 8.8E-07 3E-11 94.6 22.4 126 272-412 189-335 (430)
207 3fq8_A Glutamate-1-semialdehyd 98.7 1E-06 3.6E-11 94.0 22.6 125 272-413 198-340 (427)
208 3n5m_A Adenosylmethionine-8-am 98.7 1.1E-06 3.8E-11 94.7 22.9 129 272-413 214-361 (452)
209 3nmy_A Xometc, cystathionine g 98.7 1.5E-07 5.1E-12 101.1 15.7 127 270-415 149-287 (400)
210 3dod_A Adenosylmethionine-8-am 98.7 2.7E-06 9.3E-11 91.8 25.1 130 272-412 209-357 (448)
211 3l44_A Glutamate-1-semialdehyd 98.7 1.9E-06 6.5E-11 92.1 23.3 127 272-413 201-343 (434)
212 2ez2_A Beta-tyrosinase, tyrosi 98.7 1.8E-07 6.1E-12 100.7 14.5 129 274-413 175-332 (456)
213 3k28_A Glutamate-1-semialdehyd 98.7 8.7E-07 3E-11 94.9 19.5 126 272-413 199-340 (429)
214 3b1d_A Betac-S lyase; HET: PLP 98.1 3.1E-09 1E-13 112.2 0.0 133 272-417 163-318 (392)
215 4e77_A Glutamate-1-semialdehyd 98.6 1.5E-06 5.2E-11 92.9 20.9 126 272-413 199-341 (429)
216 3tfu_A Adenosylmethionine-8-am 98.6 2.5E-06 8.5E-11 93.0 22.8 129 272-413 232-379 (457)
217 2zy4_A L-aspartate beta-decarb 98.6 5E-06 1.7E-10 93.0 23.4 79 270-348 242-338 (546)
218 3gju_A Putative aminotransfera 98.5 1.4E-05 4.9E-10 86.5 25.4 134 272-413 220-372 (460)
219 3oks_A 4-aminobutyrate transam 98.5 1.2E-05 4E-10 87.1 23.8 123 273-413 227-366 (451)
220 4ffc_A 4-aminobutyrate aminotr 98.5 4.2E-06 1.5E-10 90.8 19.6 122 273-412 225-363 (453)
221 3hmu_A Aminotransferase, class 98.5 7.5E-06 2.6E-10 89.6 21.1 126 272-413 222-366 (472)
222 4a6r_A Omega transaminase; tra 98.4 1.1E-05 3.6E-10 87.5 20.7 124 272-410 218-360 (459)
223 3i5t_A Aminotransferase; pyrid 98.3 2E-05 6.9E-10 86.2 20.6 132 272-414 220-370 (476)
224 2cy8_A D-phgat, D-phenylglycin 98.3 1.4E-05 4.9E-10 86.0 16.4 127 272-413 200-344 (453)
225 4eu1_A Mitochondrial aspartate 98.2 6.9E-06 2.4E-10 86.9 13.5 134 272-414 182-345 (409)
226 2hox_A ALLIIN lyase 1; cystein 98.2 1.5E-05 5.1E-10 86.0 15.8 135 270-418 193-341 (427)
227 2c0r_A PSAT, phosphoserine ami 98.2 1.2E-06 4.2E-11 90.9 6.7 101 449-549 188-288 (362)
228 2epj_A Glutamate-1-semialdehyd 98.2 1.9E-05 6.6E-10 84.4 16.1 126 273-413 203-344 (434)
229 3bc8_A O-phosphoseryl-tRNA(SEC 98.2 2.1E-05 7.2E-10 86.1 15.4 129 275-419 200-346 (450)
230 2e7u_A Glutamate-1-semialdehyd 98.1 9.2E-05 3.1E-09 78.8 17.9 127 272-413 198-340 (424)
231 4h51_A Aspartate aminotransfer 98.1 0.0002 6.8E-09 77.6 20.6 138 270-414 187-352 (420)
232 4ao9_A Beta-phenylalanine amin 98.0 0.00014 4.6E-09 79.8 17.4 126 272-413 219-361 (454)
233 1w23_A Phosphoserine aminotran 98.0 9.4E-06 3.2E-10 83.7 7.1 160 449-608 187-359 (360)
234 2yky_A Beta-transaminase; tran 97.1 2E-06 6.8E-11 94.6 0.0 124 272-413 232-375 (465)
235 3ou5_A Serine hydroxymethyltra 97.8 8.3E-05 2.8E-09 81.2 12.2 283 51-419 55-359 (490)
236 3hl2_A O-phosphoseryl-tRNA(SEC 97.5 0.0009 3.1E-08 73.4 13.6 106 293-414 241-356 (501)
237 3ffr_A Phosphoserine aminotran 97.5 4.9E-05 1.7E-09 77.9 3.3 97 449-546 182-288 (362)
238 2fyf_A PSAT, phosphoserine ami 97.4 0.00024 8.1E-09 74.9 7.2 159 449-608 213-397 (398)
239 3k7y_A Aspartate aminotransfer 97.2 0.0067 2.3E-07 65.0 17.1 133 272-414 172-340 (405)
240 1ohv_A 4-aminobutyrate aminotr 96.9 0.004 1.4E-07 67.8 11.3 118 273-413 258-394 (472)
241 3ke3_A Putative serine-pyruvat 96.9 0.0012 4.3E-08 69.1 6.7 159 447-608 188-375 (379)
242 3f0h_A Aminotransferase; RER07 96.7 0.0011 3.8E-08 68.5 5.1 158 449-608 197-373 (376)
243 4atq_A 4-aminobutyrate transam 96.6 0.086 2.9E-06 57.5 19.3 123 273-413 226-365 (456)
244 4e3q_A Pyruvate transaminase; 96.0 0.31 1.1E-05 53.3 19.6 130 273-413 236-383 (473)
245 1ajs_A Aspartate aminotransfer 95.7 0.015 5E-07 61.0 7.2 142 451-608 251-410 (412)
246 1uu1_A Histidinol-phosphate am 95.6 0.017 5.9E-07 58.9 6.9 130 451-604 195-333 (335)
247 2dr1_A PH1308 protein, 386AA l 95.5 0.018 6E-07 59.3 6.6 159 448-608 198-378 (386)
248 1kmj_A Selenocysteine lyase; p 95.4 0.034 1.2E-06 57.5 8.6 157 449-608 217-404 (406)
249 1m32_A 2-aminoethylphosphonate 95.3 0.015 5E-07 59.3 5.4 157 449-607 184-363 (366)
250 1elu_A L-cysteine/L-cystine C- 95.3 0.035 1.2E-06 57.2 8.3 155 449-605 211-388 (390)
251 1yaa_A Aspartate aminotransfer 95.3 0.023 7.7E-07 59.7 7.0 136 453-607 249-409 (412)
252 2huf_A Alanine glyoxylate amin 95.3 0.028 9.5E-07 58.2 7.5 159 449-610 197-384 (393)
253 1t3i_A Probable cysteine desul 94.8 0.067 2.3E-06 55.6 8.7 159 449-609 222-413 (420)
254 2q7w_A Aspartate aminotransfer 94.6 0.018 6.2E-07 59.8 3.7 138 453-605 241-395 (396)
255 2yrr_A Aminotransferase, class 94.3 0.062 2.1E-06 54.2 6.7 156 449-607 177-351 (353)
256 2bkw_A Alanine-glyoxylate amin 94.2 0.029 9.8E-07 57.7 4.1 155 449-607 192-382 (385)
257 2ch1_A 3-hydroxykynurenine tra 94.2 0.079 2.7E-06 54.8 7.4 159 449-610 196-384 (396)
258 2z9v_A Aspartate aminotransfer 94.1 0.084 2.9E-06 54.5 7.5 160 449-611 187-373 (392)
259 3zrp_A Serine-pyruvate aminotr 94.1 0.052 1.8E-06 55.6 5.8 161 448-610 179-364 (384)
260 3lvm_A Cysteine desulfurase; s 93.9 0.083 2.8E-06 55.3 7.0 157 449-614 216-404 (423)
261 3b46_A Aminotransferase BNA3; 93.7 0.063 2.2E-06 57.4 5.8 144 449-606 265-444 (447)
262 2o1b_A Aminotransferase, class 93.7 0.048 1.7E-06 57.3 4.7 142 450-608 245-402 (404)
263 3kgw_A Alanine-glyoxylate amin 93.6 0.099 3.4E-06 53.7 6.9 160 449-610 201-389 (393)
264 1iug_A Putative aspartate amin 93.6 0.095 3.2E-06 53.1 6.5 156 449-609 176-348 (352)
265 4hvk_A Probable cysteine desul 93.5 0.087 3E-06 53.7 6.2 156 449-613 190-377 (382)
266 3nnk_A Ureidoglycine-glyoxylat 93.4 0.12 4.2E-06 53.5 7.2 162 448-611 190-392 (411)
267 4eb5_A Probable cysteine desul 93.2 0.1 3.6E-06 53.4 6.3 153 449-611 190-375 (382)
268 3isl_A Purine catabolism prote 93.2 0.12 4.1E-06 53.7 6.7 160 449-610 189-391 (416)
269 3vax_A Putative uncharacterize 93.1 0.13 4.5E-06 53.2 6.8 154 449-608 211-399 (400)
270 1eg5_A Aminotransferase; PLP-d 93.0 0.19 6.5E-06 51.3 7.8 150 449-609 194-376 (384)
271 3fsl_A Aromatic-amino-acid ami 92.6 0.14 4.7E-06 53.1 6.1 137 453-604 242-395 (397)
272 3e9k_A Kynureninase; kynurenin 92.4 0.19 6.5E-06 53.8 7.1 158 447-608 265-460 (465)
273 1d2f_A MALY protein; aminotran 92.2 0.59 2E-05 48.2 10.4 141 453-608 228-388 (390)
274 1vjo_A Alanine--glyoxylate ami 92.2 0.21 7.2E-06 51.6 7.0 155 448-605 211-391 (393)
275 2z67_A O-phosphoseryl-tRNA(SEC 91.6 0.26 9.1E-06 52.9 7.1 141 449-605 289-454 (456)
276 3cai_A Possible aminotransfera 91.3 0.31 1.1E-05 50.5 7.1 151 449-604 218-404 (406)
277 4f4e_A Aromatic-amino-acid ami 90.7 0.36 1.2E-05 50.8 6.9 138 453-605 264-418 (420)
278 3meb_A Aspartate aminotransfer 89.6 0.78 2.7E-05 48.9 8.5 108 496-609 320-444 (448)
279 1qz9_A Kynureninase; kynurenin 89.1 0.46 1.6E-05 49.4 6.2 159 449-610 218-403 (416)
280 2vi8_A Serine hydroxymethyltra 87.7 0.49 1.7E-05 48.9 5.2 145 449-607 217-385 (405)
281 2epj_A Glutamate-1-semialdehyd 87.3 3.5 0.00012 43.3 11.6 137 455-608 268-430 (434)
282 2hox_A ALLIIN lyase 1; cystein 86.2 0.93 3.2E-05 48.3 6.4 144 450-607 243-423 (427)
283 3lws_A Aromatic amino acid bet 83.2 1.6 5.5E-05 44.3 6.4 136 450-603 198-353 (357)
284 4eu1_A Mitochondrial aspartate 82.2 1.7 6E-05 45.1 6.3 100 496-605 293-407 (409)
285 3b1d_A Betac-S lyase; HET: PLP 82.4 0.29 9.9E-06 50.8 0.0 140 451-605 231-389 (392)
286 3a9z_A Selenocysteine lyase; P 81.3 2 6.8E-05 44.9 6.4 150 449-608 238-427 (432)
287 7aat_A Aspartate aminotransfer 80.9 1.6 5.5E-05 45.1 5.4 134 454-605 246-399 (401)
288 2e7u_A Glutamate-1-semialdehyd 80.8 12 0.00039 39.1 12.1 135 455-605 263-423 (424)
289 2rfv_A Methionine gamma-lyase; 80.6 1.1 3.8E-05 46.7 4.1 139 449-605 201-396 (398)
290 3pj0_A LMO0305 protein; struct 80.0 1.3 4.3E-05 45.0 4.2 138 449-603 199-356 (359)
291 3k7y_A Aspartate aminotransfer 79.6 2.5 8.7E-05 44.8 6.6 134 454-607 245-403 (405)
292 1bs0_A Protein (8-amino-7-oxon 79.1 1.1 3.9E-05 45.9 3.6 142 450-605 228-383 (384)
293 1n8p_A Cystathionine gamma-lya 77.1 2.5 8.4E-05 44.4 5.4 140 449-606 194-392 (393)
294 2aeu_A Hypothetical protein MJ 76.8 1.9 6.6E-05 44.7 4.5 141 450-608 200-370 (374)
295 3ffh_A Histidinol-phosphate am 76.7 2.5 8.5E-05 42.9 5.3 135 451-605 218-362 (363)
296 1qgn_A Protein (cystathionine 76.3 1.9 6.4E-05 46.6 4.4 80 448-545 251-333 (445)
297 1fc4_A 2-amino-3-ketobutyrate 76.3 1.6 5.6E-05 45.0 3.8 145 449-609 238-397 (401)
298 4a0g_A Adenosylmethionine-8-am 74.6 5 0.00017 46.9 7.6 49 558-609 780-828 (831)
299 3tqx_A 2-amino-3-ketobutyrate 74.5 2.3 7.8E-05 43.6 4.3 147 449-610 236-397 (399)
300 1gd9_A Aspartate aminotransfer 74.3 1.6 5.5E-05 44.8 3.1 149 448-610 223-387 (389)
301 3a2b_A Serine palmitoyltransfe 74.3 2 6.7E-05 44.4 3.8 145 450-610 235-393 (398)
302 2e7j_A SEP-tRNA:Cys-tRNA synth 73.6 2.9 9.8E-05 42.4 4.7 150 449-609 200-370 (371)
303 1wyu_A Glycine dehydrogenase ( 72.2 7.2 0.00025 41.1 7.7 155 448-605 247-436 (438)
304 1v2d_A Glutamine aminotransfer 71.8 1.5 5.2E-05 45.0 2.1 143 448-609 212-371 (381)
305 1e5e_A MGL, methionine gamma-l 70.3 16 0.00055 38.1 9.8 79 448-544 199-282 (404)
306 2w8t_A SPT, serine palmitoyltr 68.5 3.1 0.00011 43.8 3.7 152 450-616 256-422 (427)
307 3cog_A Cystathionine gamma-lya 67.7 13 0.00043 39.0 8.3 136 449-605 204-398 (403)
308 2jis_A Cysteine sulfinic acid 67.6 6.7 0.00023 42.5 6.3 156 448-607 317-513 (515)
309 3f9t_A TDC, L-tyrosine decarbo 66.6 6.5 0.00022 39.7 5.6 152 448-606 236-395 (397)
310 3vp6_A Glutamate decarboxylase 66.4 5.7 0.00019 43.3 5.4 156 448-607 306-503 (511)
311 3qhx_A Cystathionine gamma-syn 66.1 5.5 0.00019 41.5 5.1 81 447-545 201-285 (392)
312 2cy8_A D-phgat, D-phenylglycin 65.5 43 0.0015 35.0 12.0 136 455-608 266-434 (453)
313 2okj_A Glutamate decarboxylase 65.5 7.9 0.00027 41.7 6.3 155 448-607 303-500 (504)
314 1j32_A Aspartate aminotransfer 65.1 3 0.0001 42.7 2.8 145 448-608 227-386 (388)
315 2dkj_A Serine hydroxymethyltra 64.1 7.2 0.00025 39.9 5.4 146 449-608 217-387 (407)
316 3mc6_A Sphingosine-1-phosphate 63.0 9.9 0.00034 40.6 6.4 154 450-609 272-437 (497)
317 3hbx_A GAD 1, glutamate decarb 62.1 7.3 0.00025 42.3 5.2 156 448-608 267-443 (502)
318 3g0t_A Putative aminotransfera 61.9 5.9 0.0002 41.2 4.3 157 450-608 252-436 (437)
319 3p1t_A Putative histidinol-pho 61.8 6.5 0.00022 39.1 4.5 136 449-606 189-334 (337)
320 3ly1_A Putative histidinol-pho 61.1 5.1 0.00018 40.3 3.6 136 451-609 206-352 (354)
321 2fq6_A Cystathionine beta-lyas 60.8 7.3 0.00025 41.3 4.8 79 448-544 220-301 (415)
322 1xi9_A Putative transaminase; 60.5 3.5 0.00012 42.7 2.2 143 450-609 237-403 (406)
323 1yiz_A Kynurenine aminotransfe 60.4 3.6 0.00012 42.9 2.3 145 448-606 245-426 (429)
324 3asa_A LL-diaminopimelate amin 60.3 3.3 0.00011 42.9 2.0 148 451-609 229-393 (400)
325 3dzz_A Putative pyridoxal 5'-p 59.6 4.7 0.00016 41.0 3.0 144 451-609 227-389 (391)
326 3l8a_A METC, putative aminotra 59.5 4.9 0.00017 41.9 3.2 141 451-606 261-419 (421)
327 1lc5_A COBD, L-threonine-O-3-p 58.7 3.9 0.00013 41.6 2.1 139 450-609 208-360 (364)
328 3mad_A Sphingosine-1-phosphate 57.7 12 0.00039 40.5 5.8 155 450-608 304-468 (514)
329 2ay1_A Aroat, aromatic amino a 57.6 4.2 0.00015 41.7 2.2 133 453-605 238-392 (394)
330 2x5f_A Aspartate_tyrosine_phen 57.4 6.6 0.00022 41.0 3.7 143 451-608 264-428 (430)
331 1u08_A Hypothetical aminotrans 57.2 2.2 7.6E-05 43.8 0.0 140 449-604 227-385 (386)
332 3cq5_A Histidinol-phosphate am 56.0 9.3 0.00032 38.9 4.5 134 451-607 224-366 (369)
333 1rv3_A Serine hydroxymethyltra 55.9 9.4 0.00032 41.1 4.7 156 449-608 247-430 (483)
334 2gb3_A Aspartate aminotransfer 55.2 3.5 0.00012 42.8 1.1 142 449-609 235-402 (409)
335 2dgk_A GAD-beta, GADB, glutama 54.6 10 0.00036 40.0 4.7 156 449-607 253-432 (452)
336 1c7n_A Cystalysin; transferase 54.3 4.5 0.00016 41.5 1.8 143 451-608 231-392 (399)
337 3tcm_A Alanine aminotransferas 54.1 9.6 0.00033 41.2 4.5 140 452-610 311-499 (500)
338 3op7_A Aminotransferase class 53.9 18 0.00063 36.5 6.3 144 451-610 215-372 (375)
339 1fg7_A Histidinol phosphate am 53.1 8.2 0.00028 39.3 3.5 137 450-604 206-353 (356)
340 1o69_A Aminotransferase; struc 53.0 9.7 0.00033 39.3 4.1 151 449-607 175-385 (394)
341 3k40_A Aromatic-L-amino-acid d 52.7 11 0.00036 40.7 4.5 158 449-609 293-471 (475)
342 3euc_A Histidinol-phosphate am 52.1 14 0.00049 37.2 5.2 134 451-605 220-364 (367)
343 1ohv_A 4-aminobutyrate aminotr 51.7 32 0.0011 36.8 8.1 106 495-608 351-470 (472)
344 3get_A Histidinol-phosphate am 51.7 9.1 0.00031 38.7 3.6 132 451-606 220-364 (365)
345 1b5p_A Protein (aspartate amin 51.5 9.6 0.00033 39.1 3.8 140 449-604 225-380 (385)
346 4e1o_A HDC, histidine decarbox 50.7 18 0.00063 38.7 6.0 157 449-608 300-477 (481)
347 2bwn_A 5-aminolevulinate synth 50.6 8.7 0.0003 39.5 3.2 145 450-607 240-398 (401)
348 3hdo_A Histidinol-phosphate am 48.9 13 0.00045 37.5 4.3 139 451-610 207-356 (360)
349 2o0r_A RV0858C (N-succinyldiam 48.7 5.9 0.0002 41.1 1.6 146 448-609 223-396 (411)
350 2z61_A Probable aspartate amin 47.8 4.2 0.00014 41.4 0.3 142 449-606 213-368 (370)
351 1ibj_A CBL, cystathionine beta 47.8 18 0.00061 39.0 5.3 29 449-477 269-301 (464)
352 1wyu_B Glycine dehydrogenase s 47.8 28 0.00094 37.2 6.8 156 449-608 257-440 (474)
353 3gbx_A Serine hydroxymethyltra 47.5 12 0.0004 38.5 3.6 146 449-608 223-395 (420)
354 2x5d_A Probable aminotransfera 47.2 6.8 0.00023 40.6 1.8 152 449-616 236-405 (412)
355 3acz_A Methionine gamma-lyase; 46.4 28 0.00097 35.9 6.4 78 448-543 195-276 (389)
356 3ftb_A Histidinol-phosphate am 45.9 10 0.00036 38.0 2.9 137 451-607 208-359 (361)
357 1o4s_A Aspartate aminotransfer 43.8 8.5 0.00029 39.6 1.9 138 449-606 237-386 (389)
358 4dq6_A Putative pyridoxal phos 43.0 11 0.00038 38.2 2.6 140 451-605 231-389 (391)
359 2zc0_A Alanine glyoxylate tran 42.6 15 0.0005 37.7 3.5 143 451-608 240-403 (407)
360 3dyd_A Tyrosine aminotransfera 41.8 10 0.00034 39.7 2.1 142 452-610 257-425 (427)
361 2eh6_A Acoat, acetylornithine 40.4 52 0.0018 33.0 7.2 125 458-605 241-374 (375)
362 3fkd_A L-threonine-O-3-phospha 40.4 17 0.00058 36.5 3.4 139 451-609 190-342 (350)
363 2fnu_A Aminotransferase; prote 40.1 36 0.0012 34.1 5.9 148 453-609 178-372 (375)
364 3h7f_A Serine hydroxymethyltra 39.9 21 0.00072 37.6 4.3 148 449-609 239-414 (447)
365 4atq_A 4-aminobutyrate transam 39.8 2E+02 0.0069 30.7 12.1 126 465-608 303-454 (456)
366 4adb_A Succinylornithine trans 39.4 75 0.0026 32.2 8.3 135 456-609 250-400 (406)
367 2ez2_A Beta-tyrosinase, tyrosi 38.9 97 0.0033 32.2 9.2 32 579-610 400-432 (456)
368 3ruy_A Ornithine aminotransfer 38.8 73 0.0025 32.2 8.1 127 458-605 251-390 (392)
369 3kax_A Aminotransferase, class 38.5 12 0.0004 37.9 1.9 140 451-605 223-381 (383)
370 1vp4_A Aminotransferase, putat 37.5 8.1 0.00028 40.3 0.5 143 451-607 253-416 (425)
371 2r2n_A Kynurenine/alpha-aminoa 37.2 28 0.00096 36.2 4.7 144 451-608 256-423 (425)
372 1iay_A ACC synthase 2, 1-amino 36.6 14 0.00048 38.4 2.2 144 451-609 261-427 (428)
373 1sff_A 4-aminobutyrate aminotr 35.9 93 0.0032 31.8 8.4 137 455-608 265-423 (426)
374 2zyj_A Alpha-aminodipate amino 35.9 11 0.00036 38.8 1.1 143 451-608 231-392 (397)
375 3fvs_A Kynurenine--oxoglutarat 35.0 16 0.00056 37.6 2.4 142 450-607 239-420 (422)
376 3kki_A CAI-1 autoinducer synth 34.6 25 0.00084 36.2 3.7 143 450-609 248-404 (409)
377 2dou_A Probable N-succinyldiam 34.5 7.8 0.00027 39.4 -0.2 139 450-605 222-374 (376)
378 1pff_A Methionine gamma-lyase; 34.0 80 0.0027 31.1 7.3 135 449-604 136-329 (331)
379 3e2y_A Kynurenine-oxoglutarate 33.5 21 0.00073 36.4 2.9 141 451-605 233-409 (410)
380 3ezs_A Aminotransferase ASPB; 32.5 24 0.00081 35.6 3.1 137 451-609 224-375 (376)
381 1v72_A Aldolase; PLP-dependent 32.4 18 0.00061 36.0 2.1 144 449-608 203-352 (356)
382 3n0l_A Serine hydroxymethyltra 31.6 43 0.0015 34.1 4.9 146 449-608 218-388 (417)
383 2pb2_A Acetylornithine/succiny 31.1 87 0.003 32.5 7.2 133 456-607 268-416 (420)
384 3h14_A Aminotransferase, class 30.9 19 0.00064 36.7 2.0 146 452-614 224-387 (391)
385 2oga_A Transaminase; PLP-depen 30.9 35 0.0012 35.0 4.1 150 450-608 203-395 (399)
386 3aow_A Putative uncharacterize 30.8 18 0.00061 38.4 1.8 144 450-608 281-444 (448)
387 1vef_A Acetylornithine/acetyl- 30.8 1.2E+02 0.004 30.7 8.1 130 455-605 251-393 (395)
388 3a8u_X Omega-amino acid--pyruv 30.7 1E+02 0.0035 32.0 7.8 143 455-608 285-446 (449)
389 3fdb_A Beta C-S lyase, putativ 29.7 31 0.0011 34.7 3.4 141 451-608 216-375 (377)
390 1bw0_A TAT, protein (tyrosine 29.5 9.1 0.00031 39.5 -0.7 147 451-610 246-414 (416)
391 3bwn_A AT1G70560, L-tryptophan 29.3 48 0.0017 34.1 4.9 142 452-608 211-386 (391)
392 1z7d_A Ornithine aminotransfer 29.3 1.4E+02 0.0046 31.2 8.5 135 455-608 278-428 (433)
393 2a7v_A Serine hydroxymethyltra 29.3 33 0.0011 37.4 3.6 156 449-607 257-439 (490)
394 1js3_A DDC;, DOPA decarboxylas 28.7 57 0.0019 34.6 5.4 157 449-608 294-473 (486)
395 3ndn_A O-succinylhomoserine su 27.3 32 0.0011 36.2 3.0 80 449-545 218-300 (414)
396 2oat_A Ornithine aminotransfer 27.3 1.5E+02 0.0052 30.9 8.4 134 455-607 289-437 (439)
397 3rq1_A Aminotransferase class 26.9 28 0.00097 35.8 2.5 142 452-611 256-417 (418)
398 3nra_A Aspartate aminotransfer 25.6 14 0.00048 37.7 -0.1 145 449-609 244-405 (407)
399 3qgu_A LL-diaminopimelate amin 25.6 25 0.00086 36.7 1.8 151 450-608 274-439 (449)
400 3jtx_A Aminotransferase; NP_28 24.9 30 0.001 35.2 2.2 137 451-605 238-394 (396)
401 3t18_A Aminotransferase class 24.9 15 0.00051 37.9 -0.1 138 451-606 254-411 (413)
402 2vyc_A Biodegradative arginine 23.7 27 0.00092 40.2 1.7 146 452-609 380-605 (755)
403 3piu_A 1-aminocyclopropane-1-c 22.9 54 0.0019 33.9 3.8 144 451-609 266-432 (435)
404 1svv_A Threonine aldolase; str 22.1 39 0.0013 33.4 2.4 142 450-607 208-356 (359)
405 2qma_A Diaminobutyrate-pyruvat 20.3 84 0.0029 33.4 4.7 152 448-608 315-495 (497)
406 3dxv_A Alpha-amino-epsilon-cap 20.3 2.8E+02 0.0096 28.4 8.7 143 455-611 267-427 (439)
No 1
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=100.00 E-value=3.9e-61 Score=517.31 Aligned_cols=361 Identities=56% Similarity=0.911 Sum_probs=313.5
Q ss_pred ceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHH
Q psy8733 52 VINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAV 131 (621)
Q Consensus 52 ~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~ 131 (621)
-.|+.|+++++|++|+++|.+++.+|.++|+|+++++||+++|.++++++|+.+++|||++++++|+|++||||+
T Consensus 14 ~~~n~at~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~----- 88 (377)
T 3e77_A 14 GTENLYFQSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCG----- 88 (377)
T ss_dssp -CCCEECSCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHH-----
T ss_pred ccccccccCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHH-----
Confidence 358899999999999999999999999999999999999999999999999999999999887899999899999
Q ss_pred HHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCC--CCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccC
Q psy8733 132 AMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGR--TGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIP 209 (621)
Q Consensus 132 alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~--g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 209 (621)
+|++++.|++.+ ||+++++++|.|+++|.++++++|.+.++.+.
T Consensus 89 --------------------------a~n~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~-------- 134 (377)
T 3e77_A 89 --------------------------QFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPK-------- 134 (377)
T ss_dssp --------------------------HHHHHHHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCC--------
T ss_pred --------------------------HHHHHHHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEecc--------
Confidence 555577788754 89999999999999999999999864332211
Q ss_pred CCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccccc
Q psy8733 210 DQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVE 289 (621)
Q Consensus 210 ~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~ 289 (621)
+|+ .+..|+..++.+++++++|++|||||++|++
T Consensus 135 ------------------------~~~----------------------~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~ 168 (377)
T 3e77_A 135 ------------------------LGS----------------------YTKIPDPSTWNLNPDASYVYYCANETVHGVE 168 (377)
T ss_dssp ------------------------CSS----------------------SCSCCCGGGCCCCTTCSCEEEESEETTTTEE
T ss_pred ------------------------CCC----------------------cCCCCChHHhccCCCccEEEEeCccCchheE
Confidence 111 1112222344678899999999999999999
Q ss_pred cccccccCCCcEEEecccccCCCcccccccceEEeccccccCCCccEEEEEchhHHhhhCCCCCceeeccccccCCCccC
Q psy8733 290 FNYIPDSQGIPLVSDMSSNFLSRKFDVSKFGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYN 369 (621)
Q Consensus 290 ~p~i~~~~g~llvvDavSs~G~~pIDv~~~gvl~asaqK~lGP~Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~ 369 (621)
+|++++.+|++++||++|++|+.|+|+++||++++|+|||+||+|+|++|+|+++++++.+..|.|++|....+.+++++
T Consensus 169 ~pii~~~~~~~~~vD~~q~~g~~~id~~~~~~~~~s~~K~~gp~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~ 248 (377)
T 3e77_A 169 FDFIPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYN 248 (377)
T ss_dssp CSSCCCCTTCCEEEECTTTTTSSCCCGGGCSEEEEEGGGTTSCTTCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSS
T ss_pred chhhhccCCCEEEEEcccccCCCCCchhhcCEEEEecccccCCCccEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCC
Confidence 99988889999999999999999999999999999999999999999999999999988888888888887666778899
Q ss_pred CchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccCccCCCCCCCCcccccccccccccCCchhhH
Q psy8733 370 TPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQAGCRSRMNVTDIFFTFSHVQTGSAFFF 449 (621)
Q Consensus 370 TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~~~~~~~RS~~nv~~~~~t~~~~~~~~~~~~ 449 (621)
|||+++|++|++||+|+.++||++++++|+++++++++++|++++|+++++.+++.||+++++
T Consensus 249 Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivs----------------- 311 (377)
T 3e77_A 249 TPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIP----------------- 311 (377)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEE-----------------
T ss_pred CchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEE-----------------
Confidence 999999999999999999998899999999999999999999998898777677889998775
Q ss_pred HHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHH
Q psy8733 450 GVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNS 529 (621)
Q Consensus 450 ~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~ 529 (621)
+.. -
T Consensus 312 --------------------------------------f~~-~------------------------------------- 315 (377)
T 3e77_A 312 --------------------------------------FRI-G------------------------------------- 315 (377)
T ss_dssp --------------------------------------EEE-S-------------------------------------
T ss_pred --------------------------------------EEc-C-------------------------------------
Confidence 111 0
Q ss_pred HHHHHHHHHHHhccCCcccccCCCCCcccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHHHHHHHHHHHHc
Q psy8733 530 LQKSVLLYQEIDNSDKFYECPVQAGFPLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 530 ~~ka~~lY~~id~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~~ 609 (621)
.++++.+++..|++.++++||...+||+..|+||+|+++.+|.||+++|+++|++|.++|
T Consensus 316 --------------------~~~~~~~~~~~~l~~l~~~Gi~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 316 --------------------NAKGDDALEKRFLDKALELNMLSLKGHRSVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp --------------------STTCCHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------CCCCchhHHHHHHHHHHHCCcEEeCCCCcCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 001001244678888899999999999999999999999999999999999999999998
Q ss_pred C
Q psy8733 610 S 610 (621)
Q Consensus 610 ~ 610 (621)
+
T Consensus 376 ~ 376 (377)
T 3e77_A 376 Q 376 (377)
T ss_dssp C
T ss_pred C
Confidence 6
No 2
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=100.00 E-value=2.7e-59 Score=500.23 Aligned_cols=357 Identities=40% Similarity=0.697 Sum_probs=307.5
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
+++|||+|||+++|++|+++|.+++.+|.++|+|+++++||+++|.++++++|+.+++|||++++++|+|+++|||+
T Consensus 4 ~~~~~f~pgpt~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~--- 80 (361)
T 3m5u_A 4 MRKINFSAGPSTLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASL--- 80 (361)
T ss_dssp CCCEECCSSSCCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHH---
T ss_pred cceEeecCCCCCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHH---
Confidence 57899999999999999999999999999999999999999999999999999999999999887899998899999
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccC
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIP 209 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 209 (621)
++++++.|++ +|++++++++|.|+++|.++++++|....+++
T Consensus 81 ----------------------------a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~--------- 122 (361)
T 3m5u_A 81 ----------------------------QFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVA--------- 122 (361)
T ss_dssp ----------------------------HHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEE---------
T ss_pred ----------------------------HHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEe---------
Confidence 5555788888 78999999999999999999999986433322
Q ss_pred CCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccccc
Q psy8733 210 DQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVE 289 (621)
Q Consensus 210 ~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~ 289 (621)
.+|+.. +...|+. + +++++++|+++||||++|++
T Consensus 123 -----------------------~~~~g~--------------------~~~~~~~-~--l~~~t~lv~~~~~e~~tG~~ 156 (361)
T 3m5u_A 123 -----------------------SSEESN--------------------FDHIPRV-E--FSDNADYAYICSNNTIYGTQ 156 (361)
T ss_dssp -----------------------ECTTTT--------------------SCSCCCC-C--CCTTSSEEEEESEETTTTEE
T ss_pred -----------------------cccCcC--------------------CCcCChh-h--cCCCCCEEEEeCCCCCccee
Confidence 111110 1012333 2 67899999999999999999
Q ss_pred cccccccCCCcEEEecccccCCCcccccccceEEeccccccCCCccEEEEEchhHHhhhCC-CCCceeeccccccCCCcc
Q psy8733 290 FNYIPDSQGIPLVSDMSSNFLSRKFDVSKFGVIIAGAQKNIGPAGITVVIVREDLLEYALP-ITPTVFHFKINADNNSVY 368 (621)
Q Consensus 290 ~p~i~~~~g~llvvDavSs~G~~pIDv~~~gvl~asaqK~lGP~Glg~livr~~ll~~~~~-~~P~~ld~~~~~~~~s~~ 368 (621)
+|.+++. |++++||++|++|+.|+|++++|++++|+|||+||+|+|++|+|+++++++.+ ..|.+++|....+.+.++
T Consensus 157 ~~~i~~~-~~~~~vD~~q~~g~~~id~~~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 235 (361)
T 3m5u_A 157 YQNYPKT-KTPLIVDASSDFFSRKVDFSNIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLF 235 (361)
T ss_dssp CSSCCCC-SSCEEEECGGGTTSSCCCCTTEEEEEEETTTTSSCTTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCS
T ss_pred CCccccc-CCEEEEEcccccCCCCCCcccCCEEEEechhccCCCccEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCC
Confidence 8888775 99999999999999999999999999999999999999999999999999887 678888877665667889
Q ss_pred CCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccCccCCCCCCCCcccccccccccccCCchhh
Q psy8733 369 NTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQAGCRSRMNVTDIFFTFSHVQTGSAFF 448 (621)
Q Consensus 369 ~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~~~~~~~RS~~nv~~~~~t~~~~~~~~~~~ 448 (621)
+|||+++|++|++||+|+.++||++++++|+++++++++++|++++|++....+++.||+++++
T Consensus 236 ~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivs---------------- 299 (361)
T 3m5u_A 236 NTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDLSNGFYKGHADKKDRSLMNVS---------------- 299 (361)
T ss_dssp SCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTSTTSEEESSCGGGBCSSEEE----------------
T ss_pred CCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCeeeccCCHHHcCCeEEE----------------
Confidence 9999999999999999999998899999999999999999999998875544456678887765
Q ss_pred HHHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 449 FGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
+.. -+
T Consensus 300 ---------------------------------------f~~-~~----------------------------------- 304 (361)
T 3m5u_A 300 ---------------------------------------FNI-AK----------------------------------- 304 (361)
T ss_dssp ---------------------------------------EEE-SS-----------------------------------
T ss_pred ---------------------------------------EEC-CC-----------------------------------
Confidence 111 00
Q ss_pred HHHHHHHHHHHHhccCCcccccCCCCCcccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHHHHHHHHHHHH
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPVQAGFPLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
...++..|.+.++++||....||+..|+||+|.++..|.||+++|+++|++|.++
T Consensus 305 -------------------------~~~~~~~~~~~L~~~gI~~~~g~~~~g~iRiS~~~~~t~edId~l~~al~~~~~~ 359 (361)
T 3m5u_A 305 -------------------------NKDLEPLFVKEAEEAGMIGLKGHRILGGIRASIYNALNLDQVKTLCEFMKEFQGK 359 (361)
T ss_dssp -------------------------CTTHHHHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------chhhhHHHHHHHHHCCCEEecCCCccCeEEEEccCCCCHHHHHHHHHHHHHHHHh
Confidence 0023346778888999999999999999999999999999999999999999998
Q ss_pred cC
Q psy8733 609 HS 610 (621)
Q Consensus 609 ~~ 610 (621)
|.
T Consensus 360 ~~ 361 (361)
T 3m5u_A 360 YA 361 (361)
T ss_dssp HC
T ss_pred cC
Confidence 74
No 3
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=100.00 E-value=4.3e-59 Score=502.81 Aligned_cols=357 Identities=45% Similarity=0.767 Sum_probs=277.8
Q ss_pred CceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhH
Q psy8733 51 PVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAA 130 (621)
Q Consensus 51 ~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a 130 (621)
++|||+|||+++|++|+++|.+++.++.++|.|+++++||+++|.++++++|+.+++|||++++++|+|+++|||+
T Consensus 27 ~~yl~~agpt~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~---- 102 (386)
T 3qm2_A 27 QVFNFSSGPAMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRG---- 102 (386)
T ss_dssp CCEECCSSSCCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTH----
T ss_pred cCccccCCCCCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchH----
Confidence 6899999999999999999999999999999999999999999999999999999999999877899998899999
Q ss_pred HHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCC
Q psy8733 131 VAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPD 210 (621)
Q Consensus 131 ~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~ 210 (621)
++++++.|++.+||+++++++|.|+++|..+++++| ...+++..
T Consensus 103 ---------------------------a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~-------- 146 (386)
T 3qm2_A 103 ---------------------------QFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAK-------- 146 (386)
T ss_dssp ---------------------------HHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECE--------
T ss_pred ---------------------------HHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecC--------
Confidence 455577888888999999999999999999999988 43222210
Q ss_pred CCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccccc-
Q psy8733 211 QSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVE- 289 (621)
Q Consensus 211 ~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~- 289 (621)
..+||..++ ++..+..+++++++|+++||||++|++
T Consensus 147 ---------------------~~~~G~~~~----------------------~~~~~~~l~~~t~lV~~~h~et~tG~~i 183 (386)
T 3qm2_A 147 ---------------------ITVDGKRAV----------------------KPMREWQLSDNAAYLHYCPNETIDGIAI 183 (386)
T ss_dssp ---------------------EEETTEEEE----------------------CCGGGCCCCTTCSCEEECSEETTTTEEC
T ss_pred ---------------------cccCCCCCC----------------------chHHHhhcCCCCcEEEEECCcCCcCEec
Confidence 001332121 111123577899999999999999997
Q ss_pred ccc--ccccCCCcEEEecccccCCCcccccccceEEeccccccCCCccEEEEEchhHHhhhCCCCCceeeccccccCCCc
Q psy8733 290 FNY--IPDSQGIPLVSDMSSNFLSRKFDVSKFGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSV 367 (621)
Q Consensus 290 ~p~--i~~~~g~llvvDavSs~G~~pIDv~~~gvl~asaqK~lGP~Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~ 367 (621)
+|+ |+ +|++++||++|++|+.|+|+++||++++|+|||+||+|+|++|+|+++++++.+..|.+++|....+.+.+
T Consensus 184 ~pi~~i~--~g~~~~vDa~qs~g~~pidv~~~~~~~~s~hK~lGP~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~ 261 (386)
T 3qm2_A 184 DETPDFG--PEVVVTADFSSTILSAPLDVSRYGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSM 261 (386)
T ss_dssp CCCCCCC--TTCCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCTTEEEEEEEGGGCSCCCTTSCGGGCHHHHHHC---
T ss_pred Cchhhhc--CCCEEEEEcccccCCCCCCccccCEEEEecccccCCCccEEEEECHHHHhhhcccCCcHHHHHHHhhcCCC
Confidence 775 44 79999999999999999999999999999999999999999999999999888877877777766667788
Q ss_pred cCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccCccCCCCCCCCcccccccccccccCCchh
Q psy8733 368 YNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQAGCRSRMNVTDIFFTFSHVQTGSAF 447 (621)
Q Consensus 368 ~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~~~~~~~RS~~nv~~~~~t~~~~~~~~~~ 447 (621)
++|||+++|++|++||+|+.++||++++++|+++++++++++|+++ |++..+.+++.||+++++
T Consensus 262 ~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~iv~--------------- 325 (386)
T 3qm2_A 262 FNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRNDVAQANRSRMNVP--------------- 325 (386)
T ss_dssp ----CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECCBCGGGBCSSEEE---------------
T ss_pred CCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccCCCHHHcCceEEE---------------
Confidence 9999999999999999999999889999999999999999999998 476665567789988765
Q ss_pred hHHHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 448 FFGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 448 ~~~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
+.. .
T Consensus 326 ----------------------------------------f~~--~---------------------------------- 329 (386)
T 3qm2_A 326 ----------------------------------------FQL--A---------------------------------- 329 (386)
T ss_dssp ----------------------------------------EEE--S----------------------------------
T ss_pred ----------------------------------------EEC--C----------------------------------
Confidence 111 0
Q ss_pred HHHHHHHHHHHHHhccCCcccccCCCCCcccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHHHHHHHHHHH
Q psy8733 528 NSLQKSVLLYQEIDNSDKFYECPVQAGFPLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKFMKEFRH 607 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~~~~~~~~~ 607 (621)
+..++..|++.++++||....||+..|+||+|+|+.+|.||+++|+++|++|.+
T Consensus 330 --------------------------~~~~~~~~~~~L~~~gI~~~~g~~~~~~iRiS~~~~~t~edId~l~~~l~~~~~ 383 (386)
T 3qm2_A 330 --------------------------DNTLDKVFLEESFAAGLHALKGHRVVGGMRASIYNAMPIEGVKALTDFMIDFER 383 (386)
T ss_dssp --------------------------SGGGHHHHHHHHHHTTEECCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred --------------------------CccccHHHHHHHHHCCCEEeCCCCCcCeEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 012335677788999999999999999999999999999999999999999999
Q ss_pred HcC
Q psy8733 608 KHS 610 (621)
Q Consensus 608 ~~~ 610 (621)
+|+
T Consensus 384 ~~~ 386 (386)
T 3qm2_A 384 RHG 386 (386)
T ss_dssp HHC
T ss_pred hcC
Confidence 985
No 4
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=100.00 E-value=2.2e-38 Score=332.21 Aligned_cols=359 Identities=43% Similarity=0.764 Sum_probs=278.7
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
.++|+|+|||+++|++|++++.+.+.++.+.|.|.+...||++.+.++++++|+.+++++|++++++++++++|||+
T Consensus 3 ~~~~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~--- 79 (362)
T 2c0r_A 3 ERAYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGAST--- 79 (362)
T ss_dssp CCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHH---
T ss_pred cceeeccCCCCCCCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchH---
Confidence 46899999999999999999999998887778887777899999999999999999999999865577666688998
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccC
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIP 209 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 209 (621)
++| +++.+++.+||+++++.++.|+++|...++++| ..+..+..
T Consensus 80 --a~~--------------------------~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~------- 123 (362)
T 2c0r_A 80 --QFA--------------------------MIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASS------- 123 (362)
T ss_dssp --HHH--------------------------HHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEEC-------
T ss_pred --HHH--------------------------HHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecc-------
Confidence 333 355667788888888888999998888888888 54332210
Q ss_pred CCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccccc
Q psy8733 210 DQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVE 289 (621)
Q Consensus 210 ~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~ 289 (621)
. ..+++..++.+++.+++++++|+++|.+|+||+.
T Consensus 124 -----------------------~----------------------~~~~~~~~~~~~~~i~~~t~~v~~~~~~n~tG~~ 158 (362)
T 2c0r_A 124 -----------------------E----------------------ASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQ 158 (362)
T ss_dssp -----------------------G----------------------GGTTCSCCCGGGCCCCTTEEEEEEESEETTTTEE
T ss_pred -----------------------c----------------------ccccccCCCHHHcccCCCcCEEEEeCCcCcccee
Confidence 0 0001112223333467889999999999999996
Q ss_pred cccccccCCCcEEEecccccCCCcccccccceEEeccccccCCCccEEEEEchhHHhhhCCCCCceeeccccccCCCccC
Q psy8733 290 FNYIPDSQGIPLVSDMSSNFLSRKFDVSKFGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYN 369 (621)
Q Consensus 290 ~p~i~~~~g~llvvDavSs~G~~pIDv~~~gvl~asaqK~lGP~Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~ 369 (621)
.+.+.+-+|+++++|+++++|+.|+|++++|++++|+||++||+|+|++++++++++++.+..|.++++....+.....+
T Consensus 159 ~~~l~~i~~~~vivD~a~~~~~~~~~~~~~d~~~~s~~K~~g~~G~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 238 (362)
T 2c0r_A 159 FKAFPDTGSVPLIGDMSSDILSRPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYN 238 (362)
T ss_dssp CSSCCCCTTSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSS
T ss_pred cccccccCCCEEEEEChhhccCCccchhHCcEEEEeccccccCcCcEEEEEcHHHHhhccccCchHHhHHHHhhccCcCC
Confidence 33233338999999999999999999998999999999999999999999999998877665566666554334445678
Q ss_pred CchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccCccCCCCCCCCcccccccccccccCCchhhH
Q psy8733 370 TPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQAGCRSRMNVTDIFFTFSHVQTGSAFFF 449 (621)
Q Consensus 370 TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~~~~~~~RS~~nv~~~~~t~~~~~~~~~~~~ 449 (621)
|||++.++++.++|+++.+.||++.+.++.+++++++++.|+++++++....++..+++.+++
T Consensus 239 t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~----------------- 301 (362)
T 2c0r_A 239 TPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNIT----------------- 301 (362)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSSEESSCGGGBCSSEEE-----------------
T ss_pred CchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCccccCCChHHcCCcEEE-----------------
Confidence 999999999999999998876799999999999999999999986452221122234444432
Q ss_pred HHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHH
Q psy8733 450 GVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNS 529 (621)
Q Consensus 450 ~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~ 529 (621)
+.. |.
T Consensus 302 --------------------------------------~~~----------~~--------------------------- 306 (362)
T 2c0r_A 302 --------------------------------------FRL----------AS--------------------------- 306 (362)
T ss_dssp --------------------------------------EEC----------SC---------------------------
T ss_pred --------------------------------------EEc----------CC---------------------------
Confidence 110 00
Q ss_pred HHHHHHHHHHHhccCCcccccCCCCCcccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHHHHHHHHHHHHc
Q psy8733 530 LQKSVLLYQEIDNSDKFYECPVQAGFPLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 530 ~~ka~~lY~~id~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~~ 609 (621)
.....+|.+.++++||....|++..+.||+|..+.++.||+++|++.|+++.++|
T Consensus 307 -------------------------~~~~~~~~~~L~~~gi~~~~g~~~~~~iRis~~~~~~~e~i~~l~~~l~~~~~~~ 361 (362)
T 2c0r_A 307 -------------------------EELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRSR 361 (362)
T ss_dssp -------------------------HHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------cchHHHHHHHHHHCCCeeccCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 0012346667788899888888878889999999999999999999999998877
No 5
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=100.00 E-value=8.6e-33 Score=288.17 Aligned_cols=283 Identities=42% Similarity=0.769 Sum_probs=224.9
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
+++|++++||.++|++|++++.+.+.++.+.|.+.++.+||++.+.+.++++|+.+++++|++++++|+|++|+||+
T Consensus 2 ~~~~~~~~g~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~--- 78 (360)
T 1w23_A 2 KQVFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASL--- 78 (360)
T ss_dssp CCCEECCSSSCCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHH---
T ss_pred CceEeecCCCcCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchH---
Confidence 46899999999999999999999987765667777777899999999999999999999999755689998665588
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccC
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIP 209 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 209 (621)
+++++..+++.+|++.+.++++.|++.+...+++.| ..+..+..
T Consensus 79 ----------------------------al~~~~~~l~~~~~~g~~vi~~~~~~~~~~~~~~~g-~~~~v~~~------- 122 (360)
T 1w23_A 79 ----------------------------QFTMLPMNLLTKGTIGNYVLTGSWSEKALKEAKLLG-ETHIAAST------- 122 (360)
T ss_dssp ----------------------------HHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHTTS-EEEEEEEC-------
T ss_pred ----------------------------HHHHHHHHhcCCCCcccEEEecchhHHHHHHHHHhC-CeEEeecc-------
Confidence 344456677766777888889999998777777777 54332210
Q ss_pred CCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccccc
Q psy8733 210 DQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVE 289 (621)
Q Consensus 210 ~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~ 289 (621)
+ .+++..+++.+...+++++++|+++|.+|.||..
T Consensus 123 -------------------------------~--------------~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~ 157 (360)
T 1w23_A 123 -------------------------------K--------------ANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQ 157 (360)
T ss_dssp -------------------------------G--------------GGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEE
T ss_pred -------------------------------c--------------ccCcCCccchHhhccCCCCCEEEEeCCCCCccee
Confidence 0 0000112222222457789999999999999999
Q ss_pred cccccccCCCcEEEecccccCCCcccccccceEEeccccccCCCccEEEEEchhHHhhhCCCCCceeeccccccCCCccC
Q psy8733 290 FNYIPDSQGIPLVSDMSSNFLSRKFDVSKFGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYN 369 (621)
Q Consensus 290 ~p~i~~~~g~llvvDavSs~G~~pIDv~~~gvl~asaqK~lGP~Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~ 369 (621)
.|.+.+++|+++|+|.+++.++.++++.++|++++|.||++||+|+|++++++++++++.+..+.++++....+.+..++
T Consensus 158 ~~~i~~~~~~~li~D~a~~~~~~~~~~~~~di~~~s~sK~~~~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (360)
T 1w23_A 158 YQNFPEINHAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYN 237 (360)
T ss_dssp CSSCCCCCSSCEEEECTTTTTSSCCCGGGCSEEEEETTTTTSCTTCEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSS
T ss_pred cccccccCCceEEEechhhcCCCCcCcccCCEEEEEcccccCCCCcEEEEEcHHHHhhcccCCcchhhhhhhhhccCCCC
Confidence 87666789999999999999999999988899999999999999999999999998777655554444332222346678
Q ss_pred CchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCc
Q psy8733 370 TPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKF 416 (621)
Q Consensus 370 TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~ 416 (621)
|++...++++.++++++.+.||++.+.++.+++++++++.|++++++
T Consensus 238 ~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 284 (360)
T 1w23_A 238 TPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGF 284 (360)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTS
T ss_pred CCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCc
Confidence 99999999999999999887679999999999999999999988754
No 6
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=1.9e-31 Score=276.95 Aligned_cols=340 Identities=23% Similarity=0.289 Sum_probs=261.9
Q ss_pred CceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhH
Q psy8733 51 PVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAA 130 (621)
Q Consensus 51 ~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a 130 (621)
+.++|+|||+++|++|++++.+.+.+ +..+.+|+++++.+.++++++.+++++|++++++|+|+ +|||+
T Consensus 4 ~~~~~~p~p~~~~~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~-~g~t~---- 72 (362)
T 3ffr_A 4 NKIYFTPGPSELYPTVRQHMITALDE------KIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFL-ASATE---- 72 (362)
T ss_dssp CCEEECSSSCCCCTTHHHHHHHHHHT------TTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEE-SCHHH----
T ss_pred cceeccCCCcCCCHHHHHHHHHHhcC------CccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEe-CCchH----
Confidence 57999999999999999999888743 12235789999999999999999999999766678886 67888
Q ss_pred HHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCC
Q psy8733 131 VAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPD 210 (621)
Q Consensus 131 ~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~ 210 (621)
++++++.++..+ ++.++.++.|++.|...+++.|...+..+..
T Consensus 73 ---------------------------al~~~~~~l~~~--~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------- 115 (362)
T 3ffr_A 73 ---------------------------IWERIIQNCVEK--KSFHCVNGSFSKRFYEFAGELGREAYKEEAA-------- 115 (362)
T ss_dssp ---------------------------HHHHHHHHHCSS--EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--------
T ss_pred ---------------------------HHHHHHHhccCC--cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--------
Confidence 333355666654 7788889999988888888888654332210
Q ss_pred CCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccccc
Q psy8733 211 QSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEF 290 (621)
Q Consensus 211 ~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~~ 290 (621)
+. ...+.+.+.+++++++|++||.+|.+|...
T Consensus 116 ------------------------~~------------------------~~~d~~~l~~~~~~~~v~~~~~~nptG~~~ 147 (362)
T 3ffr_A 116 ------------------------FG------------------------KGFYPADITVPADAEIICLTHNETSSGVSM 147 (362)
T ss_dssp ------------------------TT------------------------CCCCGGGCCCCTTCCEEEEESEETTTTEEC
T ss_pred ------------------------CC------------------------CCCCHHHHhccCCccEEEEEcCCCCcceeC
Confidence 00 001122223667899999999999999999
Q ss_pred cc-----ccccC-CCcEEEecccccCCCcccccccceEEeccccccC-CCccEEEEEchhHHhhhCCC------CCceee
Q psy8733 291 NY-----IPDSQ-GIPLVSDMSSNFLSRKFDVSKFGVIIAGAQKNIG-PAGITVVIVREDLLEYALPI------TPTVFH 357 (621)
Q Consensus 291 p~-----i~~~~-g~llvvDavSs~G~~pIDv~~~gvl~asaqK~lG-P~Glg~livr~~ll~~~~~~------~P~~ld 357 (621)
|+ +++++ |+++|+|+++++|+.++++++.|++++|.||++| |+|+|++++++++++++.+. .+.+++
T Consensus 148 ~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~ 227 (362)
T 3ffr_A 148 PVEDINTFRDKNKDALIFVDAVSSLPYPKFDWTKIDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHT 227 (362)
T ss_dssp CHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTTSCSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTS
T ss_pred CHHHHHHHHHhCCCCEEEEecccccCCcccChhHCcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCccccc
Confidence 95 56788 9999999999999999999888899999999997 99999999999998776542 122333
Q ss_pred ccc---cccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccCccCCCCCCCCccccc
Q psy8733 358 FKI---NADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQAGCRSRMNVTDI 434 (621)
Q Consensus 358 ~~~---~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~~~~~~~RS~~nv~~~ 434 (621)
+.. ..+...+++|+++..++++.++++++.+. |++++.++.+++++++++.|++++|+...+.++..++..+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~-- 304 (362)
T 3ffr_A 228 IPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQI-SADGIRKQTEEKAALINTYIESSKVFSFGVEDAKLRSMTTIV-- 304 (362)
T ss_dssp HHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHCSSEEESSSCGGGBCSSEEE--
T ss_pred HHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHHHccCceeccCChhhcCCceEE--
Confidence 322 12335568899999999999999999988 799999999999999999999997776654333344443322
Q ss_pred ccccccccCCchhhHHHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHH
Q psy8733 435 FFTFSHVQTGSAFFFGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFA 514 (621)
Q Consensus 435 ~~t~~~~~~~~~~~~~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~ 514 (621)
+..
T Consensus 305 -----------------------------------------------------~~~------------------------ 307 (362)
T 3ffr_A 305 -----------------------------------------------------ANT------------------------ 307 (362)
T ss_dssp -----------------------------------------------------EEE------------------------
T ss_pred -----------------------------------------------------Eec------------------------
Confidence 111
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHHHhccCCcccccCCCCCcccHHHHHHHHHccCccccCCCC--CCccceeeccCCCH
Q psy8733 515 WIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQAGFPLDELFLKEAKAHNMIQLKGHRL--VGGIRASIYNAITV 592 (621)
Q Consensus 515 ~~~~~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~g~~~--~~~~r~~~~~a~~~ 592 (621)
+ . ...+|.+.++++||....|++. .+.||++....++.
T Consensus 308 -----------------------------------~----~-~~~~~~~~l~~~gi~~~~g~~~~~~~~iRis~~~~~~~ 347 (362)
T 3ffr_A 308 -----------------------------------T----M-LPGEINKILEPFDMAVGAGYGSKKETQIRIANFPAHSL 347 (362)
T ss_dssp -----------------------------------S----S-CHHHHHHHHGGGTEEEEECSGGGTTTEEEEECCTTSCH
T ss_pred -----------------------------------C----C-CHHHHHHHHHHCCeEEecCccccCCCEEEEECCCCCCH
Confidence 0 0 1245777788889988877765 45699999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy8733 593 DEAVILVKFMKEFR 606 (621)
Q Consensus 593 ~~~~~l~~~~~~~~ 606 (621)
|+++.|++.|+++.
T Consensus 348 e~i~~l~~~l~~~~ 361 (362)
T 3ffr_A 348 EQVHKLVQTLKEKI 361 (362)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999864
No 7
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.97 E-value=2e-28 Score=260.86 Aligned_cols=271 Identities=24% Similarity=0.354 Sum_probs=205.4
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
+.+|+|+|||+++|++|++++.++ +.++.+.+||++++.+.++++|+.+++++|++++++|+|+++|||+
T Consensus 39 ~~~~~~~~~~~~~~~~v~~a~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~--- 108 (398)
T 2fyf_A 39 PRDGRFGSGPSKVRLEQLQTLTTT-------AAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATA--- 108 (398)
T ss_dssp CSSCBCCSSSCCCCHHHHHGGGTT-------TTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHH---
T ss_pred cCCccccCCCCCCCHHHHHHHhhc-------CCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhH---
Confidence 468999999999999999998763 1122224588999999999999999999999854589984578999
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHh--CCceeeecccccccc
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKY--GKVNLVIPKVSKYVS 207 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~--G~~~~~~~~~~~~~~ 207 (621)
+++ +++.+++++| ++++..+.|+..+...+..+ |...+..+
T Consensus 109 --al~--------------------------~~~~~l~~~g--v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~------- 151 (398)
T 2fyf_A 109 --FWD--------------------------AAAFGLIDKR--SLHLTYGEFSAKFASAVSKNPFVGEPIIIT------- 151 (398)
T ss_dssp --HHH--------------------------HHHHHTCSSC--EEEEECSHHHHHHHHHHHHCTTSCCCEEEE-------
T ss_pred --HHH--------------------------HHHHHhcCCC--eEEEeCCHHHHHHHHHHHHhCCCCceEEEe-------
Confidence 333 3455566554 56778889988777777776 43211111
Q ss_pred cCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccc
Q psy8733 208 IPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDG 287 (621)
Q Consensus 208 ~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tG 287 (621)
.+++ ...+. .+++++++|++||.+|.||
T Consensus 152 -------------------------~~~g------------------------~~~~~---~i~~~~~~v~~~~~~nptG 179 (398)
T 2fyf_A 152 -------------------------SDPG------------------------SAPEP---QTDPSVDVIAWAHNETSTG 179 (398)
T ss_dssp -------------------------CCTT------------------------CCCCC---CCCTTCSEEEEESEETTTT
T ss_pred -------------------------cCCC------------------------CCCCc---cccCCCCEEEEeCcCCCcc
Confidence 0011 11111 2567899999999999999
Q ss_pred ccccc--ccccCCCcEEEecccccCCCcccccccceEEeccccccCCC-ccEEEEEchhHHhhhCC------CCCceeec
Q psy8733 288 VEFNY--IPDSQGIPLVSDMSSNFLSRKFDVSKFGVIIAGAQKNIGPA-GITVVIVREDLLEYALP------ITPTVFHF 358 (621)
Q Consensus 288 v~~p~--i~~~~g~llvvDavSs~G~~pIDv~~~gvl~asaqK~lGP~-Glg~livr~~ll~~~~~------~~P~~ld~ 358 (621)
+..|+ +.+.+|+++|+|++++.|+.++++++.|++++|.||++|++ |+|++++++++++++.. ..+.++++
T Consensus 180 ~~~~~~~i~~~~~~~vivD~a~~~~~~~~~~~~~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~ 259 (398)
T 2fyf_A 180 VAVAVRRPEGSDDALVVIDATSGAGGLPVDIAETDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSL 259 (398)
T ss_dssp EECCCCCCTTCC-CEEEEECTTTTTTSCCCGGGCSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCH
T ss_pred eecchHHhhhhcCCeEEEEeccccCCcccCcccCcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEEeh
Confidence 99996 55558999999999999999999987889999999999866 79999999999887632 12334443
Q ss_pred ccccc---CCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 359 KINAD---NNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 359 ~~~~~---~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
....+ .+..++|+++..++++.++++++.+.|+++++.++.+++++++++.|++++|+...
T Consensus 260 ~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 323 (398)
T 2fyf_A 260 PIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQERPYTTPF 323 (398)
T ss_dssp HHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHSTTEEES
T ss_pred HHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHcCCceec
Confidence 32111 24567899999999999999999888559999999999999999999998766554
No 8
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.97 E-value=4.3e-29 Score=261.72 Aligned_cols=268 Identities=21% Similarity=0.278 Sum_probs=211.9
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
++.++|+|||+++|++|++++.+.+ ..|+++.+.+.++++++.+++++|++.+++++|+++|||+
T Consensus 18 ~~~~~~~pgp~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~--- 82 (376)
T 3f0h_A 18 QGMLNFTVGPVMSSEEVRAIGAEQV------------PYFRTTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTG--- 82 (376)
T ss_dssp SSCEECSSSSCCCCHHHHHHHTSCC------------CCCSSHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHH---
T ss_pred cCceeecCCCCCCcHHHHHHhcCCC------------CCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhH---
Confidence 4689999999999999999988754 3588889999999999999999999876688887788899
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccC
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIP 209 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 209 (621)
++++++..++.+||++.+..++.|++.+...+++.|...+..+.
T Consensus 83 ----------------------------al~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~-------- 126 (376)
T 3f0h_A 83 ----------------------------SMEAVVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKL-------- 126 (376)
T ss_dssp ----------------------------HHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEEC--------
T ss_pred ----------------------------HHHHHHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeC--------
Confidence 33334556677888888888899998888888888864333221
Q ss_pred CCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccccc
Q psy8733 210 DQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVE 289 (621)
Q Consensus 210 ~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~ 289 (621)
++...+++|++ ++ .+++++++|.+++.+|.+|+.
T Consensus 127 ------------------------~~~~~~d~~~l---------------------~~-~~~~~~~~v~~~~~~nptG~~ 160 (376)
T 3f0h_A 127 ------------------------EHGKKLTKEKL---------------------YE-YDNQNFTGLLVNVDETSTAVL 160 (376)
T ss_dssp ------------------------CTTCCCCHHHH---------------------HT-TTTSCCCEEEEESEETTTTEE
T ss_pred ------------------------CCCCCCCHHHH---------------------HH-hhccCceEEEEecccCCccee
Confidence 01111222221 11 256789999999999999999
Q ss_pred ccc-----ccccCCCcEEEecccccCCCcccccccc--eEEeccccccC-CCccEEEEEchhHHhhhCCC-CCc-eeecc
Q psy8733 290 FNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIG-PAGITVVIVREDLLEYALPI-TPT-VFHFK 359 (621)
Q Consensus 290 ~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lG-P~Glg~livr~~ll~~~~~~-~P~-~ld~~ 359 (621)
.|+ +++++|+++|+|++++++..++++++++ ++++|.||++| |+|+|++++++++++++.+. .+. ++++.
T Consensus 161 ~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (376)
T 3f0h_A 161 YDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLK 240 (376)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHH
T ss_pred cCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecHH
Confidence 995 4568999999999999999999998865 99999999997 99999999999998887652 222 33332
Q ss_pred cc---ccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 360 IN---ADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 360 ~~---~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
.. .....+.+||+...++++.++++++.+.||++.+.++.+++++++++.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 298 (376)
T 3f0h_A 241 DALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDLP 298 (376)
T ss_dssp HHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTSS
T ss_pred HHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 21 12345678999999999999999999886799999999999999999998864
No 9
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.95 E-value=2.2e-26 Score=241.47 Aligned_cols=270 Identities=15% Similarity=0.216 Sum_probs=206.8
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
.+.++|+|||.++|++|++++.+.+ ..|+++.+.+.+++.++.++++++.+++.+|+|+ +|||++
T Consensus 22 ~~~~~~~p~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~-~gg~~a-- 86 (393)
T 3kgw_A 22 PTRLLLGPGPSNLAPRVLAAGSLRM------------IGHMQKEMLQIMEEIKQGIQYVFQTRNPLTLVVS-GSGHCA-- 86 (393)
T ss_dssp CCCEECSSSCCCCCHHHHHHTTCCC------------CCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEES-CCTTTH--
T ss_pred ccceeccCCCCCCCHHHHHHhcccc------------cCcccHHHHHHHHHHHHHHHHHhCCCCCcEEEEe-CCcHHH--
Confidence 3569999999999999999987643 3577888889999999999999999876557765 778883
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccC
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIP 209 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 209 (621)
.++++..++.+||++.+...+.|+.++...++..|...+..+..
T Consensus 87 -----------------------------l~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~------- 130 (393)
T 3kgw_A 87 -----------------------------METALFNLLEPGDSFLTGTNGIWGMRAAEIADRIGARVHQMIKK------- 130 (393)
T ss_dssp -----------------------------HHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC-------
T ss_pred -----------------------------HHHHHHhcCCCCCEEEEEeCCchhHHHHHHHHHcCCceEEEeCC-------
Confidence 33345556778888888888999888888888888654332210
Q ss_pred CCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCC-CceEEEEecccccccc
Q psy8733 210 DQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDP-EASYLYYCDNETVDGV 288 (621)
Q Consensus 210 ~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~-~t~~V~~thnET~tGv 288 (621)
+...++++++ ++ .+++ ++++|.+++.+|.+|.
T Consensus 131 -------------------------~~~~~d~~~l---------------------~~-~i~~~~~~~v~~~~~~nptG~ 163 (393)
T 3kgw_A 131 -------------------------PGEHYTLQEV---------------------EE-GLAQHKPVLLFLVHGESSTGV 163 (393)
T ss_dssp -------------------------TTCCCCHHHH---------------------HH-HHHHHCCSEEEEESEETTTTE
T ss_pred -------------------------CCCCCCHHHH---------------------HH-HHhhCCCcEEEEeccCCcchh
Confidence 0001112221 00 1333 7899999999999999
Q ss_pred cccc-----ccccCCCcEEEecccccCCCcccccccc--eEEecccccc-CCCccEEEEEchhHHhhhCCCC----Ccee
Q psy8733 289 EFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNI-GPAGITVVIVREDLLEYALPIT----PTVF 356 (621)
Q Consensus 289 ~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~l-GP~Glg~livr~~ll~~~~~~~----P~~l 356 (621)
..|+ +++++|+++|+|.++++|..+++++.++ ++++|.||++ ||+|+|++++++++++++.+.. +.++
T Consensus 164 ~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 243 (393)
T 3kgw_A 164 VQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYT 243 (393)
T ss_dssp ECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTT
T ss_pred hccHHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceee
Confidence 9985 4568999999999999999999988775 8899999988 6999999999999988875432 1122
Q ss_pred eccc-------cccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 357 HFKI-------NADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 357 d~~~-------~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
++.. ........+|+++..++++.++++++.+. |++++.++.+++++++++.|+++ |+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 311 (393)
T 3kgw_A 244 DITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQ-GLENCWRRHREATAHLHKHLQEM-GLKFF 311 (393)
T ss_dssp CHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHT-TCCBS
T ss_pred cHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHc-CCeec
Confidence 2211 11223456799999999999999999888 89999999999999999999988 46543
No 10
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.95 E-value=8e-27 Score=243.98 Aligned_cols=267 Identities=16% Similarity=0.198 Sum_probs=196.5
Q ss_pred ceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCC-CEEEEEcCCcchhhhH
Q psy8733 52 VINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNN-YKILFLQGGGTGMFAA 130 (621)
Q Consensus 52 ~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~-yeI~f~~gggT~~~~a 130 (621)
.++|+|||+++|++|++++.+.+ .+|++..+.+.++++|+.+++++|++.+ .+|+|+ +|||+
T Consensus 3 ~~~~~~gp~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~-~g~t~---- 65 (384)
T 3zrp_A 3 KLLLHVGPTTIKEDVLVAGLENN------------VGFTSKEFVEALAYSLKGLRYVMGASKNYQPLIIP-GGGTS---- 65 (384)
T ss_dssp ---CCSSCSCCCHHHHHHTTCCS------------CCTTSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEE-SCHHH----
T ss_pred ceeccCCCCCCCHHHHHHhhccc------------cccccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEc-CCcHH----
Confidence 47999999999999999988764 3567788899999999999999999763 367765 67888
Q ss_pred HHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCC
Q psy8733 131 VAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPD 210 (621)
Q Consensus 131 ~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~ 210 (621)
+++ ++..++.+||++.+...++++..|...++..|...+..+..
T Consensus 66 -al~---------------------------~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------- 109 (384)
T 3zrp_A 66 -AME---------------------------SVTSLLKPNDKILVVSNGVFGDRWEQIFKRYPVNVKVLRPS-------- 109 (384)
T ss_dssp -HHH---------------------------HGGGGCCTTCEEEEECSSHHHHHHHHHHTTSSCEEEEECCS--------
T ss_pred -HHH---------------------------HHHhhcCCCCEEEEecCCcchHHHHHHHHHcCCcEEEecCC--------
Confidence 333 23344556666666666777776777777777643332210
Q ss_pred CCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCC-CceEEEEeccccccccc
Q psy8733 211 QSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDP-EASYLYYCDNETVDGVE 289 (621)
Q Consensus 211 ~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~-~t~~V~~thnET~tGv~ 289 (621)
+...+++|++ +. .+++ ++++|.+++.+|.+|..
T Consensus 110 ------------------------~~~~~d~~~l---------------------~~-~i~~~~~~~v~~~~~~nptG~~ 143 (384)
T 3zrp_A 110 ------------------------PGDYVKPGEV---------------------EE-EVRKSEYKLVALTHVETSTGVR 143 (384)
T ss_dssp ------------------------TTCCCCHHHH---------------------HH-HHHHSCEEEEEEESEETTTTEE
T ss_pred ------------------------CCCCCCHHHH---------------------HH-HHHhCCCcEEEEeCCCCCCceE
Confidence 0001122221 00 1233 68999999999999999
Q ss_pred ccc-----ccccCCCcEEEecccccCCCcccccccc--eEEecccccc-CCCccEEEEEchhHHhhh-CCCC--Cceeec
Q psy8733 290 FNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNI-GPAGITVVIVREDLLEYA-LPIT--PTVFHF 358 (621)
Q Consensus 290 ~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~l-GP~Glg~livr~~ll~~~-~~~~--P~~ld~ 358 (621)
.|+ +++++|+++|+|.+++++..++++++++ ++++|.||++ ||+|+|++++++++++++ .+.. +.+++.
T Consensus 144 ~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (384)
T 3zrp_A 144 EPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDL 223 (384)
T ss_dssp CCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCH
T ss_pred CcHHHHHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccH
Confidence 995 4678999999999999999999998765 9999999999 599999999999998887 4422 122222
Q ss_pred cccc---c-----CCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 359 KINA---D-----NNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 359 ~~~~---~-----~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
.... . ....++|+++..++++.++++++.+. |++.+.++.+++++++++.|+++ |+...
T Consensus 224 ~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 290 (384)
T 3zrp_A 224 RNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKE-GIENRIKRHTMVASAIRAGLEAL-GLEIV 290 (384)
T ss_dssp HHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHT-TCCBS
T ss_pred HHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHC-CCeEc
Confidence 2111 0 22334699999999999999999887 89999999999999999999988 56443
No 11
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.95 E-value=3.3e-26 Score=241.10 Aligned_cols=275 Identities=16% Similarity=0.223 Sum_probs=203.3
Q ss_pred ccCCCCCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCc
Q psy8733 45 MSSAAHPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGG 124 (621)
Q Consensus 45 m~~~~~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~ggg 124 (621)
||...+.+|++++||++.|++|++++.+.+ ..|++..+.+.+++.|+.+++++|++.+ +|+|+ +||
T Consensus 3 fp~~~~~~yl~~~~~~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~t-~g~ 68 (392)
T 2z9v_A 3 YPEHADPVITLTAGPVNAYPEVLRGLGRTV------------LYDYDPAFQLLYEKVVDKAQKAMRLSNK-PVILH-GEP 68 (392)
T ss_dssp CCTTSCCSEECSSSCCCCCHHHHHHTTSCC------------CCTTSHHHHHHHHHHHHHHHHHTTCSSC-CEEES-SCT
T ss_pred cccCCCcceeecCCCcCCCHHHHHHHhccc------------cccccHHHHHHHHHHHHHHHHHhCCCCC-EEEEe-CCc
Confidence 454546799999999999999999988764 1366777888999999999999999743 67775 678
Q ss_pred chhhhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeeccccc
Q psy8733 125 TGMFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSK 204 (621)
Q Consensus 125 T~~~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~ 204 (621)
|+ ++++ ++..++.+|+++.+..+++++..+...+++.|...+..+..
T Consensus 69 t~-----a~~~--------------------------~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-- 115 (392)
T 2z9v_A 69 VL-----GLEA--------------------------AAASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVP-- 115 (392)
T ss_dssp HH-----HHHH--------------------------HHHHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECC--
T ss_pred hH-----HHHH--------------------------HHHHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCC--
Confidence 88 3333 34444567777777777787776677777778643332210
Q ss_pred ccccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccc
Q psy8733 205 YVSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNET 284 (621)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET 284 (621)
+...++++++ .+.++.++++++|.+++..|
T Consensus 116 ------------------------------~~~~~d~~~l--------------------~~~l~~~~~~~~v~~~~~~n 145 (392)
T 2z9v_A 116 ------------------------------YNEAIDPQAV--------------------ADMLKAHPEITVVSVCHHDT 145 (392)
T ss_dssp ------------------------------TTSCCCHHHH--------------------HHHHHHCTTCCEEEEESEEG
T ss_pred ------------------------------CCCCCCHHHH--------------------HHHHhcCCCCcEEEEeccCC
Confidence 0001122221 00111145789999999999
Q ss_pred cccccccc-----ccccCCCcEEEecccccCCCcccccccc--eEEecccccc-CCCccEEEEEchhHHhhhCCCC--C-
Q psy8733 285 VDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNI-GPAGITVVIVREDLLEYALPIT--P- 353 (621)
Q Consensus 285 ~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~l-GP~Glg~livr~~ll~~~~~~~--P- 353 (621)
.||...|+ +++++|+++|+|.++++|..++++++++ ++++|.||++ ||+|+|++++++++++++.+.. +
T Consensus 146 ptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~ 225 (392)
T 2z9v_A 146 PSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPR 225 (392)
T ss_dssp GGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCC
T ss_pred CCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCC
Confidence 99999985 4568999999999999999999988765 8999999987 5999999999999988775421 2
Q ss_pred -ceeecccc----ccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCccc
Q psy8733 354 -TVFHFKIN----ADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYE 418 (621)
Q Consensus 354 -~~ld~~~~----~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~ 418 (621)
.++++... .......+|+++..++++.++++++.+. |++++.++.+++++++++.|+++ |+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~-g~~~ 293 (392)
T 2z9v_A 226 ASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNE-GPEAVWARHALTAKAMRAGVTAM-GLSV 293 (392)
T ss_dssp SSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred ceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHc-CCee
Confidence 23332211 1123446799999999999999999887 79999999999999999999987 5543
No 12
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.95 E-value=1.8e-26 Score=244.24 Aligned_cols=269 Identities=15% Similarity=0.176 Sum_probs=204.7
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
+..++|+|||.++|++|++++.+.+ ..|+++.+.+.++++++.++++++++.+ +++++++|||++
T Consensus 12 ~~~~~~~pgp~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~la~~~~~~~~-~~v~~~~sgt~a-- 76 (411)
T 3nnk_A 12 PSRLLMGPGPINADPRVLRAMSSQL------------IGQYDPAMTHYMNEVMALYRGVFRTENR-WTMLVDGTSRAG-- 76 (411)
T ss_dssp CCCEEESSSCCCCCHHHHHHHTSCC------------CCTTCHHHHHHHHHHHHHHHHHHTCCCS-EEEEEESCHHHH--
T ss_pred ccceeecCCCCCCCHHHHHHhhccc------------cccccHHHHHHHHHHHHHHHHHhCCCCC-cEEEECCCcHHH--
Confidence 4679999999999999999988653 4688889999999999999999999876 434445788983
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccC
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIP 209 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 209 (621)
+ +.++..++.+||++.+..+++++..+...++..|...+..+..
T Consensus 77 ---l--------------------------~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~------- 120 (411)
T 3nnk_A 77 ---I--------------------------EAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVP------- 120 (411)
T ss_dssp ---H--------------------------HHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECC-------
T ss_pred ---H--------------------------HHHHHHhcCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecC-------
Confidence 3 2344555677888888888888877778888888653332210
Q ss_pred CCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCC-CceEEEEecccccccc
Q psy8733 210 DQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDP-EASYLYYCDNETVDGV 288 (621)
Q Consensus 210 ~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~-~t~~V~~thnET~tGv 288 (621)
+...+++|++ ++ .+++ ++++|.+++.+|.+|+
T Consensus 121 -------------------------~~~~~d~~~l---------------------~~-~i~~~~~~~v~~~~~~nptG~ 153 (411)
T 3nnk_A 121 -------------------------WGEVFTPDQV---------------------ED-AVKRIRPRLLLTVQGDTSTTM 153 (411)
T ss_dssp -------------------------TTCCCCHHHH---------------------HH-HHHHHCCSEEEEESEETTTTE
T ss_pred -------------------------CCCCCCHHHH---------------------HH-HHhhCCCeEEEEeCCCCCcce
Confidence 0001122221 00 1232 7899999999999999
Q ss_pred cccc-----ccccCCCcEEEecccccCCCcccccccc--eEEecccccc-CCCccEEEEEchhHHhhhCCCC---Cc---
Q psy8733 289 EFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNI-GPAGITVVIVREDLLEYALPIT---PT--- 354 (621)
Q Consensus 289 ~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~l-GP~Glg~livr~~ll~~~~~~~---P~--- 354 (621)
..|+ +++++|+++|+|.+++++..++++++++ ++++|.||++ ||.|+|++++++++++++.+.. |.
T Consensus 154 ~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g 233 (411)
T 3nnk_A 154 LQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRT 233 (411)
T ss_dssp ECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCC
T ss_pred eccHHHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccc
Confidence 9986 4567899999999999999999998875 9999999996 6999999999999988775432 11
Q ss_pred --------------eeecccc----ccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCc
Q psy8733 355 --------------VFHFKIN----ADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKF 416 (621)
Q Consensus 355 --------------~ld~~~~----~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~ 416 (621)
++++... .......+|+++..++++.++++++.+. |++++.++.+++++++++.|+++ |+
T Consensus 234 ~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~-g~ 311 (411)
T 3nnk_A 234 DAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQE-GLDYGIARHKLHGDALVKGIQAM-GL 311 (411)
T ss_dssp TTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred cccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 1111110 1223456899999999999999999888 89999999999999999999987 45
Q ss_pred cc
Q psy8733 417 YE 418 (621)
Q Consensus 417 ~~ 418 (621)
..
T Consensus 312 ~~ 313 (411)
T 3nnk_A 312 ET 313 (411)
T ss_dssp CB
T ss_pred Ee
Confidence 43
No 13
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.95 E-value=1e-25 Score=237.42 Aligned_cols=269 Identities=18% Similarity=0.250 Sum_probs=201.3
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
.++|++++||.++|++|++++.+.+ ..|+++.+.+.++++|+.+++++|++.+++|+|+ +|||++
T Consensus 18 ~~~~~~~~g~~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~g~~~~~~i~~~-~g~t~a-- 82 (393)
T 2huf_A 18 PNKLLMGPGPSNAPQRVLDAMSRPI------------LGHLHPETLKIMDDIKEGVRYLFQTNNIATFCLS-ASGHGG-- 82 (393)
T ss_dssp CCCEECSSSCCCCCHHHHHHTTSCC------------CCTTSHHHHHHHHHHHHHHHHHHTCCCSEEEEES-SCHHHH--
T ss_pred CCeEEecCCCCCCCHHHHHHHHhhh------------ccCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEc-CcHHHH--
Confidence 5789999999999999999987754 2345666788999999999999999764467775 778883
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccC
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIP 209 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 209 (621)
++ .++..++.+|+++.+..+++++..+...+++.|...+..+..
T Consensus 83 ---~~--------------------------~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~------- 126 (393)
T 2huf_A 83 ---ME--------------------------ATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSK------- 126 (393)
T ss_dssp ---HH--------------------------HHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC-------
T ss_pred ---HH--------------------------HHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCC-------
Confidence 33 234445567777777777888866767777788643332210
Q ss_pred CCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCC-CceEEEEecccccccc
Q psy8733 210 DQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDP-EASYLYYCDNETVDGV 288 (621)
Q Consensus 210 ~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~-~t~~V~~thnET~tGv 288 (621)
+...++++++ +. .+++ ++++|.+++.+|.+|.
T Consensus 127 -------------------------~~~~~d~~~l---------------------~~-~i~~~~~~~v~~~~~~nptG~ 159 (393)
T 2huf_A 127 -------------------------VGQSLSLDEI---------------------RD-ALLIHKPSVLFLTQGDSSTGV 159 (393)
T ss_dssp -------------------------TTCCCCHHHH---------------------HH-HHHHHCCSEEEEESEETTTTE
T ss_pred -------------------------CCCCCCHHHH---------------------HH-HHhccCCcEEEEEccCCCccc
Confidence 0001111221 00 1334 6899999999999999
Q ss_pred cccc-----ccccCCCcEEEecccccCCCcccccccc--eEEecccccc-CCCccEEEEEchhHHhhhCCC----CCcee
Q psy8733 289 EFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNI-GPAGITVVIVREDLLEYALPI----TPTVF 356 (621)
Q Consensus 289 ~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~l-GP~Glg~livr~~ll~~~~~~----~P~~l 356 (621)
..|+ +++++|+++|+|.++++|..++++++++ ++++|.||++ ||+|+|++++++++++++.+. .|.++
T Consensus 160 ~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~ 239 (393)
T 2huf_A 160 LQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYW 239 (393)
T ss_dssp ECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGG
T ss_pred cCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEE
Confidence 9985 4567899999999999999999988765 9999999997 699999999999998887653 23233
Q ss_pred e-------ccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCccc
Q psy8733 357 H-------FKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYE 418 (621)
Q Consensus 357 d-------~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~ 418 (621)
+ +........+++|+|+..++++.++++++.+. |++++.++.+++++++++.|+++ |+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 306 (393)
T 2huf_A 240 DMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEE-GLPALIARHEDCAKRLYRGLQDA-GFEL 306 (393)
T ss_dssp CHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred chHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHHHHHc-CCee
Confidence 2 11111234566899999999999999999877 79999999999999999999987 4543
No 14
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.95 E-value=2.7e-25 Score=230.09 Aligned_cols=260 Identities=18% Similarity=0.209 Sum_probs=195.2
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHHH
Q psy8733 53 INFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAVA 132 (621)
Q Consensus 53 ~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~a 132 (621)
|||+|||+++|++|++++.+.+ ..|++..+.+.+++.|+.+++++|++. .+|+|+ +|||+ +
T Consensus 3 ~l~~~~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~g~~~-~~i~~~-~g~t~-----a 63 (352)
T 1iug_A 3 WLLTPGPVRLHPKALEALARPQ------------LHHRTEAAREVFLKARGLLREAFRTEG-EVLILT-GSGTL-----A 63 (352)
T ss_dssp EECSSSSCCCCHHHHHHHHSCC------------CCTTSHHHHHHHHHHHHHHHHHHTCSS-EEEEEE-SCHHH-----H
T ss_pred ccccCCCCCCCHHHHHHhccCC------------CCccCHHHHHHHHHHHHHHHHHhCCCC-ceEEEc-CchHH-----H
Confidence 8999999999999999998765 246778888899999999999999974 367776 67898 3
Q ss_pred HHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCCCC
Q psy8733 133 MNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQS 212 (621)
Q Consensus 133 lNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~ 212 (621)
+++ ++..++.+|+++.+..+++++..+...+++.|...+..+..
T Consensus 64 ~~~--------------------------~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---------- 107 (352)
T 1iug_A 64 MEA--------------------------LVKNLFAPGERVLVPVYGKFSERFYEIALEAGLVVERLDYP---------- 107 (352)
T ss_dssp HHH--------------------------HHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECC----------
T ss_pred HHH--------------------------HHHhccCCCCeEEEEeCCchhHHHHHHHHHcCCceEEEeCC----------
Confidence 333 34445567777777777888876666777778643322210
Q ss_pred CCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccccccc
Q psy8733 213 TWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEFNY 292 (621)
Q Consensus 213 ~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~~p~ 292 (621)
+. +.+ +.+.+.. +++++|.+++..|.||...|+
T Consensus 108 ----------------------~~-----------------------~~~-d~~~l~~-~~~~~v~~~~~~nptG~~~~l 140 (352)
T 1iug_A 108 ----------------------YG-----------------------DTP-RPEDVAK-EGYAGLLLVHSETSTGALADL 140 (352)
T ss_dssp ----------------------TT-----------------------CCC-CTTTSCC-SSCSEEEEESEETTTTEECCH
T ss_pred ----------------------CC-----------------------CCC-CHHHHhc-cCCcEEEEEEecCCcceecCH
Confidence 00 000 1122222 578999999999999999985
Q ss_pred -----ccccC--CCcEEEecccccCCCcccccccc--eEEecccccc-CCCccEEEEEchhHHhhhCCCCCceeeccc--
Q psy8733 293 -----IPDSQ--GIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNI-GPAGITVVIVREDLLEYALPITPTVFHFKI-- 360 (621)
Q Consensus 293 -----i~~~~--g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~l-GP~Glg~livr~~ll~~~~~~~P~~ld~~~-- 360 (621)
+++++ |+++|+|.++++|..++++++++ ++++|.||++ ||+|+|++++++++++++.+ ...++++..
T Consensus 141 ~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~-~~~~~~~~~~~ 219 (352)
T 1iug_A 141 PALARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMCPPGLGFVALSPRALERLKP-RGYYLDLAREL 219 (352)
T ss_dssp HHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCCCSCEEEEEECHHHHHTCCC-CSSTTCHHHHH
T ss_pred HHHHHHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccccCCCceeEEEECHHHHHHhhC-CCceeeHHHHH
Confidence 45677 99999999999999999988765 8999999977 69999999999998877654 222333221
Q ss_pred -cccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCccc
Q psy8733 361 -NADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYE 418 (621)
Q Consensus 361 -~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~ 418 (621)
........+|++...++++.++++++.+. ++++.++.+++++++++.|+++ |+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~a~~~al~~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~ 275 (352)
T 1iug_A 220 KAQKEGESAWTPAINLVLAVAAVLEEVLPR--LEEHLALKAWQNALLYGVGEEG-GLRP 275 (352)
T ss_dssp HHHTTTCCSSCCCHHHHHHHHHHHHHHGGG--HHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred hhcccCCCCCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHC-CCcc
Confidence 11224456799999999999999998764 8899999999999999999987 5543
No 15
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.94 E-value=1.9e-25 Score=236.86 Aligned_cols=270 Identities=16% Similarity=0.191 Sum_probs=203.8
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
++.++|+|||.++|++|++++.+.. .+|++..+.+.++++|+.+++++|++++ +++++++|||++
T Consensus 10 ~~~~~~~p~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~g~~~~-~~~~~~~s~t~a-- 74 (416)
T 3isl_A 10 PLRTIMTPGPVEVDPRVLRVMSTPV------------VGQFDPAFTGIMNETMEMLRELFQTKNR-WAYPIDGTSRAG-- 74 (416)
T ss_dssp CCCEECSSSSCCCCHHHHHHTTSCC------------CCTTSHHHHHHHHHHHHHHHHHTTCCCS-EEEEEESCHHHH--
T ss_pred ccceeecCCCcCcCHHHHHHhcccC------------CCCccHHHHHHHHHHHHHHHHHhCCCCC-cEEEecCcHHHH--
Confidence 4679999999999999999876632 4567778899999999999999999865 565456888883
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccC
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIP 209 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 209 (621)
++ +++..++.+||++.+...++++..+...++..|...+..+..
T Consensus 75 ---l~--------------------------~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~------- 118 (416)
T 3isl_A 75 ---IE--------------------------AVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECE------- 118 (416)
T ss_dssp ---HH--------------------------HHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC-------
T ss_pred ---HH--------------------------HHHHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecC-------
Confidence 32 344555677888888888888877777888888654332210
Q ss_pred CCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCC-CCceEEEEecccccccc
Q psy8733 210 DQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRD-PEASYLYYCDNETVDGV 288 (621)
Q Consensus 210 ~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~-~~t~~V~~thnET~tGv 288 (621)
+...+++|++ ++ .++ +++++|.++|.+|.+|.
T Consensus 119 -------------------------~~~~~d~~~l---------------------~~-~i~~~~~~~v~~~~~~nptG~ 151 (416)
T 3isl_A 119 -------------------------WGTVFDPEDI---------------------IR-EIKKVKPKIVAMVHGETSTGR 151 (416)
T ss_dssp -------------------------TTCCCCHHHH---------------------HH-HHHHHCCSEEEEESEETTTTE
T ss_pred -------------------------CCCCCCHHHH---------------------HH-HHhhCCCcEEEEEccCCCCce
Confidence 0001122221 00 133 47899999999999999
Q ss_pred cccc-----ccccCCCcEEEecccccCCCcccccccc--eEEecccccc-CCCccEEEEEchhHHhhhCCCC--------
Q psy8733 289 EFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNI-GPAGITVVIVREDLLEYALPIT-------- 352 (621)
Q Consensus 289 ~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~l-GP~Glg~livr~~ll~~~~~~~-------- 352 (621)
..|+ +++++|+++|+|+++++|..++++++++ ++++|.||++ ||+|+|++++++++++++.+..
T Consensus 152 ~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~ 231 (416)
T 3isl_A 152 IHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIAT 231 (416)
T ss_dssp ECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC---------
T ss_pred ecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCccccCCCCCeEEEEECHHHHHHhhccccccccccc
Confidence 9996 4568999999999999999999998775 9999999986 6999999999999988876421
Q ss_pred --------------Cceeecccc----ccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 353 --------------PTVFHFKIN----ADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 353 --------------P~~ld~~~~----~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
+.+++.... .......+|++...++++.++++++.+. |++++.++.+++++++++.|++.
T Consensus 232 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~- 309 (416)
T 3isl_A 232 QADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEE-GLETRFERHRHHEAALAAGIKAM- 309 (416)
T ss_dssp ---------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred cccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHc-
Confidence 111111111 1223456799999999999999999888 89999999999999999999986
Q ss_pred CcccC
Q psy8733 415 KFYEC 419 (621)
Q Consensus 415 g~~~~ 419 (621)
|+...
T Consensus 310 g~~~~ 314 (416)
T 3isl_A 310 GLRLF 314 (416)
T ss_dssp TCCBC
T ss_pred CCEec
Confidence 45443
No 16
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.94 E-value=4.5e-26 Score=241.96 Aligned_cols=259 Identities=16% Similarity=0.167 Sum_probs=186.9
Q ss_pred cccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHh
Q psy8733 87 MSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNL 166 (621)
Q Consensus 87 ~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL 166 (621)
.+||+++|.++++++++.+++++|++ .+|+| ++|||+++++ ++ ++
T Consensus 26 ~~h~~~~~~~~~~~~~~~l~~~~~~~--~~v~~-~~sgt~a~~~-------------------------------~~-~~ 70 (379)
T 3ke3_A 26 LNHMSKAFQEVMNDLLSNLKTVYNAE--AAVII-PGSGTYGMEA-------------------------------VA-RQ 70 (379)
T ss_dssp CCTTSHHHHHHHHHHHHHHHHHHTCS--EEEEE-ESCHHHHHHH-------------------------------HH-HH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCC--CEEEE-cCChhHHHHH-------------------------------HH-Hh
Confidence 58999999999999999999999997 25655 5889994333 32 34
Q ss_pred hCCCCcEEEEEcChHHHHHHHHHHHhCC--ceeeecccccccccCCCCCCCCCCCccccccccCccccCccchhhhHHHh
Q psy8733 167 IGRTGKADYVVTGSWSKKAAAEAEKYGK--VNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAE 244 (621)
Q Consensus 167 ~~~g~~~~~v~tG~~~~~~~~~a~~~G~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~ 244 (621)
+.+||++++..+++|+..|...+++.|. ..+..+.. .++. .....+| ..+++|++
T Consensus 71 ~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----------~~g~------------~~~~~~~-~~~d~~~l 127 (379)
T 3ke3_A 71 LTIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAE----------RTED------------TEAPKPF-APVDIETA 127 (379)
T ss_dssp HCTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECE----------ESSC------------CSSCCCE-ECCCHHHH
T ss_pred CCCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecc----------cccc------------ccccCCC-CCCCHHHH
Confidence 4678888888889999988888888874 21111100 0000 0000001 01222221
Q ss_pred hhcccccccccCCCccCCCCccccCC-CCCceEEEEeccccccccccc---c-----ccccCCCcEEEecccccCCCccc
Q psy8733 245 KYGKVNLVIPKVSKYVSIPDQSTWNR-DPEASYLYYCDNETVDGVEFN---Y-----IPDSQGIPLVSDMSSNFLSRKFD 315 (621)
Q Consensus 245 ~~~~~~~~~~~~~~~~~ip~~~~l~i-~~~t~~V~~thnET~tGv~~p---~-----i~~~~g~llvvDavSs~G~~pID 315 (621)
++ .+ ++++++|+++|+||.+|+.+| + +++++|+++++|++|+ |..+++
T Consensus 128 ---------------------~~-~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~ 184 (379)
T 3ke3_A 128 ---------------------VA-KIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCVWLD 184 (379)
T ss_dssp ---------------------HH-HHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTCCCC
T ss_pred ---------------------HH-HHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCcccc
Confidence 00 12 236899999999999999999 4 3568999999999999 999999
Q ss_pred ccccc--eEEeccccccC-CCccEEEEEchhHHhhhCCC-C-Cceeecccc------ccCCC--ccCCchHHHHHHHHHH
Q psy8733 316 VSKFG--VIIAGAQKNIG-PAGITVVIVREDLLEYALPI-T-PTVFHFKIN------ADNNS--VYNTPPTFVVHVIQRV 382 (621)
Q Consensus 316 v~~~g--vl~asaqK~lG-P~Glg~livr~~ll~~~~~~-~-P~~ld~~~~------~~~~s--~~~TP~v~~I~aL~~a 382 (621)
+++++ ++++|+||++| |+|+|++++++++++++.+. . +.++++..+ .+.+. ..+|||+..++++.++
T Consensus 185 ~~~~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aa 264 (379)
T 3ke3_A 185 MKELGIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDA 264 (379)
T ss_dssp HHHHTCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHH
T ss_pred ccccCCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHH
Confidence 98765 99999999995 99999999999999888652 2 223433211 11222 2369999999999999
Q ss_pred HHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccCccCCCCCCCC
Q psy8733 383 FAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQAGCRSRM 429 (621)
Q Consensus 383 L~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~~~~~~~RS~~ 429 (621)
|+++.++ |++++.++.+++++++++.|++++ +.... ++..|++.
T Consensus 265 l~~~~~~-g~~~~~~~~~~l~~~l~~~l~~~g-~~~~~-~~~~~~~~ 308 (379)
T 3ke3_A 265 ILEAKEI-GFDILRDAQWELGNRVRKVLTDKG-IESVA-AEGFEAPG 308 (379)
T ss_dssp HHHHHHH-CHHHHHHHHHHHHHHHHHHHHHTT-CCBSB-CTTCBCSS
T ss_pred HHHHHHh-cHHHHHHHHHHHHHHHHHHHHHcC-CEecC-CccccCce
Confidence 9999998 899999999999999999999984 65543 23445553
No 17
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.94 E-value=5.8e-25 Score=231.91 Aligned_cols=270 Identities=19% Similarity=0.300 Sum_probs=198.9
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
.+.+++++||.++|++|++++.+.+ ..|+++.+...++++|+.++++++++.+++|+|+ +|||++
T Consensus 17 ~~~~~~~~~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~-~g~t~a-- 81 (396)
T 2ch1_A 17 PEKIMMGPGPSNCSKRVLTAMTNTV------------LSNFHAELFRTMDEVKDGLRYIFQTENRATMCVS-GSAHAG-- 81 (396)
T ss_dssp CCCBCCSSSSCCCCHHHHHHTTSCC------------CCTTCHHHHHHHHHHHHHHHHHHTCCCSCEEEES-SCHHHH--
T ss_pred CcceeecCCCCCCCHHHHHHhcccc------------ccCCChhHHHHHHHHHHHHHHHhCCCCCcEEEEC-CcHHHH--
Confidence 4679999999999999999987653 2356677778899999999999999765467775 778983
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccC
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIP 209 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 209 (621)
++ .++..++.+|+++.+..+++++..|...++..|...+..+..
T Consensus 82 ---l~--------------------------~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~------- 125 (396)
T 2ch1_A 82 ---ME--------------------------AMLSNLLEEGDRVLIAVNGIWAERAVEMSERYGADVRTIEGP------- 125 (396)
T ss_dssp ---HH--------------------------HHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC-------
T ss_pred ---HH--------------------------HHHHHhcCCCCeEEEEcCCcccHHHHHHHHHcCCceEEecCC-------
Confidence 32 344455667788888888888876666778888653332210
Q ss_pred CCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCC-CceEEEEecccccccc
Q psy8733 210 DQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDP-EASYLYYCDNETVDGV 288 (621)
Q Consensus 210 ~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~-~t~~V~~thnET~tGv 288 (621)
+...++++++ +. .+++ ++++|.+++.+|.||.
T Consensus 126 -------------------------~~~~~d~~~l---------------------~~-~l~~~~~~~v~~~~~~nptG~ 158 (396)
T 2ch1_A 126 -------------------------PDRPFSLETL---------------------AR-AIELHQPKCLFLTHGDSSSGL 158 (396)
T ss_dssp -------------------------TTSCCCHHHH---------------------HH-HHHHHCCSEEEEESEETTTTE
T ss_pred -------------------------CCCCCCHHHH---------------------HH-HHHhCCCCEEEEECCCCCCce
Confidence 0001112221 00 1233 6899999999999999
Q ss_pred cccc-----ccccCCCcEEEecccccCCCcccccccc--eEEeccccccC-CCccEEEEEchhHHhhhCCC----CCcee
Q psy8733 289 EFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIG-PAGITVVIVREDLLEYALPI----TPTVF 356 (621)
Q Consensus 289 ~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lG-P~Glg~livr~~ll~~~~~~----~P~~l 356 (621)
..|+ +++++|+++|+|.++++|..++++++++ +++.|.||+++ |+|+|++++++++++.+... .+.++
T Consensus 159 ~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 238 (396)
T 2ch1_A 159 LQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYW 238 (396)
T ss_dssp ECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGG
T ss_pred ecCHHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEe
Confidence 9985 3467899999999999999999998884 88899999985 99999999999998876432 12222
Q ss_pred ec-------cccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 357 HF-------KINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 357 d~-------~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
+. ..........+|+|...++++.++++++.+. +++.+.++.+++++++++.|+++ |+...
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 306 (396)
T 2ch1_A 239 DLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEE-GLENQIKRRIECAQILYEGLGKM-GLDIF 306 (396)
T ss_dssp CHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHH-TCCBS
T ss_pred chHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHC-CCeec
Confidence 21 1101123456899999999999999998777 89999999999999999999987 45443
No 18
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.94 E-value=1.5e-24 Score=227.18 Aligned_cols=285 Identities=25% Similarity=0.339 Sum_probs=207.0
Q ss_pred chhccccccccchhhhhhccCCCCCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHH
Q psy8733 27 LGNIIRNTYLDSRIHTTAMSSAAHPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALR 106 (621)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~m~~~~~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La 106 (621)
.|..+|..|+ |.. +.+|++++||.++|++|++++.+.+ .+|+++.+.+..+++++.++
T Consensus 6 ~~~~~r~~f~--------~~~--~~~~l~~~~~~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~la 63 (386)
T 2dr1_A 6 FEEAFKEVYE--------MVK--PKYKLFTAGPVACFPEVLEIMKVQM------------FSHRSKEYRKVHMDTVERLR 63 (386)
T ss_dssp CHHHHHHHHH--------HHS--CCSEECCSSSCCCCHHHHHHTTSCC------------CCTTSHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHh--------hcC--ccceeecCCCcCCcHHHHHHHhccc------------ccccCHHHHHHHHHHHHHHH
Confidence 4556666664 221 3689999999999999999987654 23667777889999999999
Q ss_pred HHhCCCCCCEEEEEcCCcchhhhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHH
Q psy8733 107 ELLNVPNNYKILFLQGGGTGMFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAA 186 (621)
Q Consensus 107 ~Ll~~p~~yeI~f~~gggT~~~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~ 186 (621)
+++|+++.++|+|+ +|||++ ++ .++..++.+|+++.+..+++++..+.
T Consensus 64 ~~~g~~~~~~v~~~-~g~t~a-----~~--------------------------~~~~~l~~~gd~vl~~~~~~~~~~~~ 111 (386)
T 2dr1_A 64 EFLEVEKGEVLLVP-SSGTGI-----ME--------------------------ASIRNGVSKGGKVLVTIIGAFGKRYK 111 (386)
T ss_dssp HHHTCSSSEEEEES-SCHHHH-----HH--------------------------HHHHHHSCTTCEEEEEESSHHHHHHH
T ss_pred HHhCCCCCcEEEEe-CChHHH-----HH--------------------------HHHHHhhcCCCeEEEEcCCchhHHHH
Confidence 99999833357665 778883 32 23444556777777777777776677
Q ss_pred HHHHHhCCceeeecccccccccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCcc
Q psy8733 187 AEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQS 266 (621)
Q Consensus 187 ~~a~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~ 266 (621)
..++..|...+..+.. ..| ..+++++ .+
T Consensus 112 ~~~~~~g~~~~~v~~~------------------------------~~~--~~d~~~l--------------------~~ 139 (386)
T 2dr1_A 112 EVVESNGRKAVVLEYE------------------------------PGK--AVKPEDL--------------------DD 139 (386)
T ss_dssp HHHHHTTCEEEEEECC------------------------------TTC--CCCHHHH--------------------HH
T ss_pred HHHHHhCCceEEEecC------------------------------CCC--CCCHHHH--------------------HH
Confidence 7778888643332210 000 0112221 00
Q ss_pred ccCCCCCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCcccccccc--eEEeccccccC-CCccEEE
Q psy8733 267 TWNRDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIG-PAGITVV 338 (621)
Q Consensus 267 ~l~i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lG-P~Glg~l 338 (621)
.++.++++++|.+++.+|.+|...|+ +++++|+++|+|.+++.|..++++.+++ ++++|.||++| |.|+|++
T Consensus 140 ~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~g~G~~ 219 (386)
T 2dr1_A 140 ALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKAFGVPPGLAIG 219 (386)
T ss_dssp HHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTSTTCCCSSCEEE
T ss_pred HHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEeccccccCCCceEEE
Confidence 11114678999999999999999885 4568999999999999999988888775 99999999997 7799999
Q ss_pred EEchhHHhhhCCC--CCceeecccc---cc-CCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc
Q psy8733 339 IVREDLLEYALPI--TPTVFHFKIN---AD-NNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN 412 (621)
Q Consensus 339 ivr~~ll~~~~~~--~P~~ld~~~~---~~-~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~ 412 (621)
++++++++++.+. ...++++... .. .....+|++....+++.++|+++.+.||++++.++.+++++++++.|++
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~ 299 (386)
T 2dr1_A 220 AFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVRE 299 (386)
T ss_dssp EECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998887542 1223333211 11 2344568999999999999999887768999999999999999999998
Q ss_pred cCCccc
Q psy8733 413 SDKFYE 418 (621)
Q Consensus 413 ~~g~~~ 418 (621)
+ |+..
T Consensus 300 ~-g~~~ 304 (386)
T 2dr1_A 300 I-GLDI 304 (386)
T ss_dssp T-TCCB
T ss_pred c-CCee
Confidence 7 4543
No 19
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.94 E-value=4.9e-25 Score=230.91 Aligned_cols=271 Identities=16% Similarity=0.217 Sum_probs=191.6
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCC---CCEEEEEcCCcch
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPN---NYKILFLQGGGTG 126 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~---~yeI~f~~gggT~ 126 (621)
++.++|+|||..++++|++++.+.+ ..|+++.+...+.++|+.++++++... ..+|+|+ +|||+
T Consensus 4 ~~~~~~~p~p~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~-~g~t~ 70 (385)
T 2bkw_A 4 SVDTLLIPGPIILSGAVQKALDVPS------------LGHTSPEFVSIFQRVLKNTRAVFKSAAASKSQPFVLA-GSGTL 70 (385)
T ss_dssp CCCEECSSSSCCCCHHHHHTTSCCC------------CCTTSHHHHHHHHHHHHHHHHHTTCCGGGTCEEEEEE-SCTTH
T ss_pred ccceeecCCCcCchHHHHHHHhccc------------cccCCHHHHHHHHHHHHHHHHHhCCCCCCCCceEEEc-CchHH
Confidence 4579999999999999999987653 246778888889999999999999752 2367776 67999
Q ss_pred hhhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhh---CCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccc
Q psy8733 127 MFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLI---GRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVS 203 (621)
Q Consensus 127 ~~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~---~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~ 203 (621)
+ +++ ++..+. .+|+++++..++.|...+...++..|...+..+..
T Consensus 71 a-----l~~--------------------------~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~- 118 (385)
T 2bkw_A 71 G-----WDI--------------------------FASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL- 118 (385)
T ss_dssp H-----HHH--------------------------HHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-
T ss_pred H-----HHH--------------------------HHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-
Confidence 3 333 333343 45555555555666655555667777643322210
Q ss_pred cccccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCC-CceEEEEecc
Q psy8733 204 KYVSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDP-EASYLYYCDN 282 (621)
Q Consensus 204 ~~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~-~t~~V~~thn 282 (621)
++...++++++ ++ .+++ ++++|++++.
T Consensus 119 ------------------------------~~~~~~d~~~l---------------------~~-~l~~~~~~~v~~~~~ 146 (385)
T 2bkw_A 119 ------------------------------KIGESVPLELI---------------------TE-KLSQNSYGAVTVTHV 146 (385)
T ss_dssp ------------------------------STTSCCCHHHH---------------------HH-HHHHSCCSEEEEESE
T ss_pred ------------------------------CCCCCCCHHHH---------------------HH-HHhcCCCCEEEEEcc
Confidence 00000112221 00 1223 6899999999
Q ss_pred cccccccccc-----ccccC--CCcEEEecccccCCCcccccccc--eEEecccccc-CCCccEEEEEchhHHh-hhCC-
Q psy8733 283 ETVDGVEFNY-----IPDSQ--GIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNI-GPAGITVVIVREDLLE-YALP- 350 (621)
Q Consensus 283 ET~tGv~~p~-----i~~~~--g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~l-GP~Glg~livr~~ll~-~~~~- 350 (621)
.|.||+..|+ +++++ |+++|+|+++++|..++++++++ ++++|.||++ ||+|+|+++++++.++ ++.+
T Consensus 147 ~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~ 226 (385)
T 2bkw_A 147 DTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFALTASQKAIGAPAGLSISLCSSRFMDYALNDS 226 (385)
T ss_dssp ETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHH
T ss_pred CCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEEEecCccccccCCcceEEEEcHHHHHHHHhhc
Confidence 9999999985 45677 99999999999999999988775 8999999988 5999999999999887 6531
Q ss_pred ----CCCceee---ccc----c-ccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH-HccCCcc
Q psy8733 351 ----ITPTVFH---FKI----N-ADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEI-DNSDKFY 417 (621)
Q Consensus 351 ----~~P~~ld---~~~----~-~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L-~~~~g~~ 417 (621)
....+.+ +.. . ...+.+++|+++..++++.++++++.+. |++++.++.+++++++++.| +++ |+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~-g~~ 304 (385)
T 2bkw_A 227 KNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEE-GLHKRWDLHREMSDWFKDSLVNGL-QLT 304 (385)
T ss_dssp HHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHTTT-CCE
T ss_pred cCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHHHhc-Cce
Confidence 1111111 100 0 1123345799999999999999999887 89999999999999999999 887 565
Q ss_pred cC
Q psy8733 418 EC 419 (621)
Q Consensus 418 ~~ 419 (621)
..
T Consensus 305 ~~ 306 (385)
T 2bkw_A 305 SV 306 (385)
T ss_dssp ES
T ss_pred ec
Confidence 43
No 20
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.94 E-value=4.5e-25 Score=227.68 Aligned_cols=265 Identities=17% Similarity=0.217 Sum_probs=193.7
Q ss_pred ceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCcchhhhH
Q psy8733 52 VINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVP-NNYKILFLQGGGTGMFAA 130 (621)
Q Consensus 52 ~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p-~~yeI~f~~gggT~~~~a 130 (621)
.++|+|||+++|++|++++.+.+ ..|+++.+.+.++++|+.+++++|++ +.++|+|+ +|||+
T Consensus 1 ~~~~~~gp~~~~~~v~~a~~~~~------------~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t-~g~t~---- 63 (353)
T 2yrr_A 1 MLLLTPGPTPIPERVQKALLRPM------------RGHLDPEVLRVNRAIQERLAALFDPGEGALVAALA-GSGSL---- 63 (353)
T ss_dssp CEECSSSSCCCCHHHHGGGGSCC------------CCTTCHHHHHHHHHHHHHHHHHHCCCTTCEEEEES-SCHHH----
T ss_pred CccCCCCCCCCCHHHHHHHhccc------------ccccCHHHHHHHHHHHHHHHHHhCCCCCCceEEEc-CCcHH----
Confidence 37999999999999999988764 13678888899999999999999996 33467775 67888
Q ss_pred HHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCC
Q psy8733 131 VAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPD 210 (621)
Q Consensus 131 ~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~ 210 (621)
++++ ++..+.. +++.+...++++..|...++..|...+..+..
T Consensus 64 -a~~~--------------------------~~~~~~~--d~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------- 106 (353)
T 2yrr_A 64 -GMEA--------------------------GLANLDR--GPVLVLVNGAFSQRVAEMAALHGLDPEVLDFP-------- 106 (353)
T ss_dssp -HHHH--------------------------HHHTCSC--CCEEEEECSHHHHHHHHHHHHTTCCEEEEECC--------
T ss_pred -HHHH--------------------------HHHHhcC--CcEEEEcCCCchHHHHHHHHHcCCceEEEeCC--------
Confidence 3333 3334433 56666666777765666777788643332210
Q ss_pred CCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCC-CceEEEEeccccccccc
Q psy8733 211 QSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDP-EASYLYYCDNETVDGVE 289 (621)
Q Consensus 211 ~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~-~t~~V~~thnET~tGv~ 289 (621)
+...+++|++ +. .+++ ++++|.+++..|.||..
T Consensus 107 ------------------------~~~~~d~~~l---------------------~~-~l~~~~~~~v~~~~~~nptG~~ 140 (353)
T 2yrr_A 107 ------------------------PGEPVDPEAV---------------------AR-ALKRRRYRMVALVHGETSTGVL 140 (353)
T ss_dssp ------------------------TTSCCCHHHH---------------------HH-HHHHSCCSEEEEESEETTTTEE
T ss_pred ------------------------CCCCCCHHHH---------------------HH-HHHhCCCCEEEEEccCCCccee
Confidence 0000112221 00 1223 68899999999999999
Q ss_pred ccc-----ccccCCCcEEEecccccCCCcccccccc--eEEecccccc-CCCccEEEEEchhHHhhhCCCCC-ceeeccc
Q psy8733 290 FNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNI-GPAGITVVIVREDLLEYALPITP-TVFHFKI 360 (621)
Q Consensus 290 ~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~l-GP~Glg~livr~~ll~~~~~~~P-~~ld~~~ 360 (621)
.|+ +++++|+++|+|.++++|..++++++++ ++++|.||++ ||+|+|++++++++++++.. .+ .++++..
T Consensus 141 ~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~-~~~~~~~~~~ 219 (353)
T 2yrr_A 141 NPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSAPPGLAPIAASLEARKAFTG-KRGWYLDLAR 219 (353)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCCCSSCEEEEECHHHHHHCCC-CSCSTTCHHH
T ss_pred cCHHHHHHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccccCCCceEEEEECHHHHHHhcc-CCCccccHHH
Confidence 985 4567899999999999999998888764 8999999987 68999999999999887753 22 2222211
Q ss_pred ---cccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 361 ---NADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 361 ---~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
........+|++...++++.++++++.+. |++++.++.+++++++++.|+++ |+...
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 279 (353)
T 2yrr_A 220 VAEHWERGGYHHTTPVLLHYALLEALDLVLEE-GVAARERRAREVYAWVLEELKAR-GFRPY 279 (353)
T ss_dssp HHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHT-TCEES
T ss_pred HhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 11123445799999999999999999887 89999999999999999999987 56543
No 21
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.93 E-value=1.4e-24 Score=225.08 Aligned_cols=270 Identities=20% Similarity=0.250 Sum_probs=194.2
Q ss_pred CceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHH-HHHHHHHHHHHHHhCCCCC-CEEEEEcCCcchhh
Q psy8733 51 PVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYT-KINNDTQAALRELLNVPNN-YKILFLQGGGTGMF 128 (621)
Q Consensus 51 ~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~-~i~~~ar~~La~Ll~~p~~-yeI~f~~gggT~~~ 128 (621)
++++|++||...|++|++++.+. ..|+...+. +.+++.|+.+++++|.+.+ .+|+|+ +|||+
T Consensus 4 ~~~~~~~gp~~~~~~v~~a~~~~-------------~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~-~g~t~-- 67 (366)
T 1m32_A 4 NYLLLTPGPLTTSRTVKEAMLFD-------------SCTWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQ-GSGSY-- 67 (366)
T ss_dssp -CEECSSSSCCCCHHHHHTTCCC-------------CCTTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEE-SCHHH--
T ss_pred ccccccCCCcCCCHHHHHHHhhh-------------hcCCCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEe-cChHH--
Confidence 47999999999999999998763 247777777 8899999999999995433 257776 67888
Q ss_pred hHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeeccccccccc
Q psy8733 129 AAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSI 208 (621)
Q Consensus 129 ~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~ 208 (621)
++++ ++..+..+|+++.+...+.|+..+...++..|...+..+..
T Consensus 68 ---a~~~--------------------------~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~------ 112 (366)
T 1m32_A 68 ---AVEA--------------------------VLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCG------ 112 (366)
T ss_dssp ---HHHH--------------------------HHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECC------
T ss_pred ---HHHH--------------------------HHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCC------
Confidence 3332 44445566777766666777765666677778643322210
Q ss_pred CCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccc
Q psy8733 209 PDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGV 288 (621)
Q Consensus 209 ~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv 288 (621)
+....+++++ .+.+.-++++++|.+++.+|.+|.
T Consensus 113 --------------------------~~~~~d~~~l--------------------~~~l~~~~~~~~v~~~~~~nptG~ 146 (366)
T 1m32_A 113 --------------------------EVARPDVQAI--------------------DAILNADPTISHIAMVHSETTTGM 146 (366)
T ss_dssp --------------------------TTSCCCHHHH--------------------HHHHHHCTTCCEEEEESEETTTTE
T ss_pred --------------------------CCCCCCHHHH--------------------HHHHhcCCCeEEEEEecccCCcce
Confidence 0000112221 001111235789999999999999
Q ss_pred cccc-----ccccCCCcEEEecccccCCCcccccccc--eEEecccccc-CCCccEEEEEchhHHhhhCCCC-Cceeecc
Q psy8733 289 EFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNI-GPAGITVVIVREDLLEYALPIT-PTVFHFK 359 (621)
Q Consensus 289 ~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~l-GP~Glg~livr~~ll~~~~~~~-P~~ld~~ 359 (621)
..|+ +++++|+++|+|.++++|..++++++++ ++++|.||++ ||.|+|++++++++++++.+.. +.+++..
T Consensus 147 ~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~ 226 (366)
T 1m32_A 147 LNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLY 226 (366)
T ss_dssp ECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHH
T ss_pred ecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcccccCCCceEEEEECHHHHHhhcCCCCCccccHH
Confidence 9985 4567899999999999999999988764 8999999998 6999999999999988765432 2222211
Q ss_pred cc-----ccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCccc
Q psy8733 360 IN-----ADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYE 418 (621)
Q Consensus 360 ~~-----~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~ 418 (621)
.. ...+...+|++...++++.++++++.+.||++.+.++.+++++++++.|+++ |+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~~~ 289 (366)
T 1m32_A 227 AQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GFNT 289 (366)
T ss_dssp HHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred HHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CCee
Confidence 10 0112334699999999999999999888349999999999999999999987 4543
No 22
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.92 E-value=2.2e-23 Score=216.94 Aligned_cols=269 Identities=12% Similarity=0.073 Sum_probs=188.1
Q ss_pred ceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHH
Q psy8733 52 VINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAV 131 (621)
Q Consensus 52 ~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~ 131 (621)
+|++++++++.|++|++++.+.+.+....+.+ .+..+....+.++++|+.+++++|++.+ +|+|+ +|||+
T Consensus 2 iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~la~~~~~~~~-~i~~~-~g~~~----- 71 (382)
T 4hvk_A 2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSS---VHSYGFKAREAVQEAREKVAKLVNGGGG-TVVFT-SGATE----- 71 (382)
T ss_dssp CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTC---SSHHHHHHHHHHHHHHHHHHHHTTCTTE-EEEEE-SSHHH-----
T ss_pred EeecCCCcCCCCHHHHHHHHHHHHhhcCCCcc---cchHHHHHHHHHHHHHHHHHHHcCCCcC-eEEEE-CCchH-----
Confidence 69999999999999999999998764432222 2223456778999999999999999653 68776 67888
Q ss_pred HHHHhhhccCC---CCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHH-HHHHHHHHhCCceeeecccccccc
Q psy8733 132 AMNLISSSMNV---PNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSK-KAAAEAEKYGKVNLVIPKVSKYVS 207 (621)
Q Consensus 132 alNlla~~~~~---~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~-~~~~~a~~~G~~~~~~~~~~~~~~ 207 (621)
+++++...+.+ ++||+|++. ..++.+. .....+++.|...+..+..
T Consensus 72 a~~~~~~~~~~~~~~~gd~vi~~-------------------------~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 121 (382)
T 4hvk_A 72 ANNLAIIGYAMRNARKGKHILVS-------------------------AVEHMSVINPAKFLQKQGFEVEYIPVG----- 121 (382)
T ss_dssp HHHHHHHHHHHHHGGGCCEEEEE-------------------------TTCCHHHHHHHHHHHHTTCEEEEECBC-----
T ss_pred HHHHHHHHhhhhhcCCCCEEEEC-------------------------CCCcHHHHHHHHHHHhcCCEEEEeccC-----
Confidence 34443222221 344444443 3333332 1223445567543322210
Q ss_pred cCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccc
Q psy8733 208 IPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDG 287 (621)
Q Consensus 208 ~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tG 287 (621)
+...+++|++ + -.+++++++|.+++..|.+|
T Consensus 122 ---------------------------~~~~~d~~~l---------------------~-~~i~~~~~~v~~~~~~nptG 152 (382)
T 4hvk_A 122 ---------------------------KYGEVDVSFI---------------------D-QKLRDDTILVSVQHANNEIG 152 (382)
T ss_dssp ---------------------------TTSCBCHHHH---------------------H-HHCCTTEEEEECCSBCTTTC
T ss_pred ---------------------------CCCCcCHHHH---------------------H-HHhccCceEEEEECCCCCce
Confidence 0001122221 1 12567899999999999999
Q ss_pred ccccc-----ccccCCCcEEEecccccCCCcccccccc--eEEeccccccCCCccEEEEEchhHHhhhCCCCCceeeccc
Q psy8733 288 VEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKI 360 (621)
Q Consensus 288 v~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lGP~Glg~livr~~ll~~~~~~~P~~ld~~~ 360 (621)
...|+ +++++|+ +|+|+++++|..+++++.++ ++++|.||++||+|+|+++++++. .+. +.+....
T Consensus 153 ~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~--~~~---~~~~~~~- 225 (382)
T 4hvk_A 153 TIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KLQ---PVILGGG- 225 (382)
T ss_dssp BBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTCSEEEEESGGGTSCTTCEEEEEETTC--CCC---CSSCSSC-
T ss_pred eeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHhcCCCceEEEEEcCcc--CcC---cccccCC-
Confidence 99985 4678999 99999999999999988664 999999999899999999999875 221 2221111
Q ss_pred cccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 361 NADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 361 ~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
.......+|++...+.++.++++++.+ +++++.++.+++++++++.|++++|+...
T Consensus 226 -~~~~~~~~~~~~~~~~~~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 281 (382)
T 4hvk_A 226 -QENGLRSGSENVPSIVGFGKAAEITAM--EWREEAERLRRLRDRIIDNVLKIEESYLN 281 (382)
T ss_dssp -TGGGTSCSCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTSTTEEEC
T ss_pred -CcCccccCCcCHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Confidence 122345689999999999999998764 68999999999999999999988776544
No 23
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.92 E-value=2.6e-23 Score=219.39 Aligned_cols=269 Identities=18% Similarity=0.254 Sum_probs=196.1
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
.+.|++++||.++|++|++++.+.+. .|++..+.+..+++++.+++++|++.+++|+|+ +|||++
T Consensus 33 ~~~~l~~~~~~~~~~~v~~a~~~~~~------------~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~t-~g~t~a-- 97 (393)
T 1vjo_A 33 PSRLLLGPGPSNAHPSVLQAMNVSPV------------GHLDPAFLALMDEIQSLLRYVWQTENPLTIAVS-GTGTAA-- 97 (393)
T ss_dssp CCCEECSSSCCCCCHHHHHHHSSCCC------------CTTSHHHHHHHHHHHHHHHHHHTCCCSCEEEES-SCHHHH--
T ss_pred ccceeccCCCCCCCHHHHHHHhcccc------------cccCHHHHHHHHHHHHHHHHHhCCCCCcEEEEe-CchHHH--
Confidence 46899999999999999999887641 255666788999999999999999654368876 678883
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccC
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIP 209 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 209 (621)
+++ ++..++.+|+++.+..+++++..+...++..|...+..+..
T Consensus 98 ---l~~--------------------------~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~------- 141 (393)
T 1vjo_A 98 ---MEA--------------------------TIANAVEPGDVVLIGVAGYFGNRLVDMAGRYGADVRTISKP------- 141 (393)
T ss_dssp ---HHH--------------------------HHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC-------
T ss_pred ---HHH--------------------------HHHhccCCCCEEEEEcCChhHHHHHHHHHHcCCceEEEecC-------
Confidence 332 34445567777777777777755667777778643332210
Q ss_pred CCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCC-CceEEEEecccccccc
Q psy8733 210 DQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDP-EASYLYYCDNETVDGV 288 (621)
Q Consensus 210 ~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~-~t~~V~~thnET~tGv 288 (621)
+...++++++ +. .+++ ++++|.+++.+|.+|.
T Consensus 142 -------------------------~~~~~d~~~l---------------------~~-~l~~~~~~~v~~~~~~nptG~ 174 (393)
T 1vjo_A 142 -------------------------WGEVFSLEEL---------------------RT-ALETHRPAILALVHAETSTGA 174 (393)
T ss_dssp -------------------------TTCCCCHHHH---------------------HH-HHHHHCCSEEEEESEETTTTE
T ss_pred -------------------------CCCCCCHHHH---------------------HH-HHhhCCceEEEEeccCCCcce
Confidence 0000112221 00 1233 6889999999999999
Q ss_pred cccc-----ccccCCCcEEEecccccCCCcccccccc--eEEeccccccC-CCccEEEEEchhHHhhhCCC---C-Ccee
Q psy8733 289 EFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIG-PAGITVVIVREDLLEYALPI---T-PTVF 356 (621)
Q Consensus 289 ~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lG-P~Glg~livr~~ll~~~~~~---~-P~~l 356 (621)
..|+ +++++|+++|+|.++++|..++++++++ ++++|.||+++ |.|+|++++++++++++... . +.++
T Consensus 175 ~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~ 254 (393)
T 1vjo_A 175 RQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYL 254 (393)
T ss_dssp ECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTT
T ss_pred eccHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceec
Confidence 9885 4567899999999999999999998775 88999999995 77999999999998877432 1 1111
Q ss_pred ecc---ccccCCCcc-CCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCccc
Q psy8733 357 HFK---INADNNSVY-NTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYE 418 (621)
Q Consensus 357 d~~---~~~~~~s~~-~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~ 418 (621)
+.. .+....... +|+|...++++.++++++.+. |++++.++.+++++++++.|+++ |+..
T Consensus 255 ~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 318 (393)
T 1vjo_A 255 DMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQE-GLANCWQRHQKNVEYLWERLEDI-GLSL 318 (393)
T ss_dssp CHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHT-TCCB
T ss_pred CcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHHHc-CCcc
Confidence 110 001122333 399999999999999998777 89999999999999999999987 4543
No 24
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.91 E-value=1.7e-22 Score=214.09 Aligned_cols=277 Identities=10% Similarity=0.045 Sum_probs=194.9
Q ss_pred CceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhH
Q psy8733 51 PVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAA 130 (621)
Q Consensus 51 ~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a 130 (621)
.+|++++++++.|++|++++.+.+.++.....+ ....+....+.++++|+.+++++|++.+ +|+|+ +|+|+
T Consensus 27 ~~~ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~t~---- 97 (406)
T 3cai_A 27 WVHFDAPAGMLIPDSVATTVSTAFRRSGASTVG---AHPSARRSAAVLDAAREAVADLVNADPG-GVVLG-ADRAV---- 97 (406)
T ss_dssp CEECBGGGCCCCCHHHHHHHHHHHHHCCSSSCS---SSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEE-SCHHH----
T ss_pred eEEEeCCCcCCCCHHHHHHHHHHHHhcCCCCCC---ccHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEe-CChHH----
Confidence 689999999999999999999998654322211 1113445678899999999999999643 68886 67888
Q ss_pred HHHHHhhhcc--CCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeeccccccccc
Q psy8733 131 VAMNLISSSM--NVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSI 208 (621)
Q Consensus 131 ~alNlla~~~--~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~ 208 (621)
+++++...+ .+++||+|++... .|.+ .-..+...+++.|...+..+..
T Consensus 98 -al~~~~~~l~~~~~~gd~vi~~~~----~~~~-------------------~~~~~~~~~~~~g~~v~~v~~~------ 147 (406)
T 3cai_A 98 -LLSLLAEASSSRAGLGYEVIVSRL----DDEA-------------------NIAPWLRAAHRYGAKVKWAEVD------ 147 (406)
T ss_dssp -HHHHHHHHTGGGGBTTCEEEEETT----SCGG-------------------GTHHHHHHHHHHBCEEEEECCC------
T ss_pred -HHHHHHHHHhhccCCCCEEEEcCC----ccHH-------------------HHHHHHHHHHhcCCeEEEEecC------
Confidence 566555444 3667777777643 1110 0122334455567543322210
Q ss_pred CCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCcccc--CCCCCceEEEEecccccc
Q psy8733 209 PDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTW--NRDPEASYLYYCDNETVD 286 (621)
Q Consensus 209 ~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l--~i~~~t~~V~~thnET~t 286 (621)
+.+ +.+ +.+.+ .+++++++|.+++..|.|
T Consensus 148 ----~~~--------------------------------------------~~~-d~~~l~~~l~~~~~~v~~~~~~npt 178 (406)
T 3cai_A 148 ----IET--------------------------------------------GEL-PTWQWESLISKSTRLVAVNSASGTL 178 (406)
T ss_dssp ----TTT--------------------------------------------CCC-CGGGHHHHCCTTEEEEEEESBCTTT
T ss_pred ----ccc--------------------------------------------CCc-CHHHHHHHhCCCceEEEEeCCcCCc
Confidence 000 000 11111 256789999999999999
Q ss_pred cccccc-----ccccCCCcEEEecccccCCCcccccccc--eEEeccccccCCCccE-EEEEchhHHhhhCCCCCceeec
Q psy8733 287 GVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIGPAGIT-VVIVREDLLEYALPITPTVFHF 358 (621)
Q Consensus 287 Gv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lGP~Glg-~livr~~ll~~~~~~~P~~ld~ 358 (621)
|...|+ +++++|+++|+|++++.|..++++.+++ ++++|.||++||. +| ++++++++++++.+... .+
T Consensus 179 G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~~g~~-~G~~~~~~~~~~~~l~~~~~---~~ 254 (406)
T 3cai_A 179 GGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAWGGPP-IGAMVFRDPSVMNSFGSVST---NP 254 (406)
T ss_dssp CBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGGTSCS-CEEEEESCHHHHHTSCCCCS---CT
T ss_pred cccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcCCCEEEeehhhhcCCC-cCeEEEEehHHHhhcCCccc---CC
Confidence 999996 4568899999999999999999887765 8899999999975 99 99999999887654321 11
Q ss_pred cccccCCCccCCchHHHHHHHHHHHHHHHhhC-------------CHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 359 KINADNNSVYNTPPTFVVHVIQRVFAWIKRQG-------------GLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 359 ~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~g-------------Gl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
..........+|++...++++.++++++.+.| +++.+.++.+++++++++.|++++|+...
T Consensus 255 ~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 328 (406)
T 3cai_A 255 YATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFDYLMVSLRSLPLVMLI 328 (406)
T ss_dssp TCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEC
T ss_pred CCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCeEEc
Confidence 11111123367999999999999999998874 27899999999999999999988766443
No 25
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.91 E-value=1.7e-22 Score=212.77 Aligned_cols=278 Identities=17% Similarity=0.166 Sum_probs=194.0
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccc-cHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHR-SADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMF 128 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shr-s~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~ 128 (621)
..+|++.+++.+.|++|++++.+.+.++.... +...|. +....+.++++|+.++++++.++..+|+|+ +|||+
T Consensus 23 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~-~g~t~-- 96 (406)
T 1kmj_A 23 PLAYLDSAASAQKPSQVIDAEAEFYRHGYAAV---HRGIHTLSAQATEKMENVRKRASLFINARSAEELVFV-RGTTE-- 96 (406)
T ss_dssp ECEECCTTTCCCCCHHHHHHHHHHHHHTCCCC---SSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEE-SSHHH--
T ss_pred ceEEecCCccCCCCHHHHHHHHHHHHhhcCCC---CCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEe-CChhH--
Confidence 36899999999999999999999987643211 101121 224567889999999999999333468887 67888
Q ss_pred hHHHHHHhhhccC---CCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHH--HHHHHHHHhCCceeeecccc
Q psy8733 129 AAVAMNLISSSMN---VPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSK--KAAAEAEKYGKVNLVIPKVS 203 (621)
Q Consensus 129 ~a~alNlla~~~~---~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~--~~~~~a~~~G~~~~~~~~~~ 203 (621)
+++++...+. +++||+|++.. +++++. .|...++..|...+..+..
T Consensus 97 ---a~~~~~~~~~~~~~~~gd~vl~~~-------------------------~~~~~~~~~~~~~~~~~g~~~~~~~~~- 147 (406)
T 1kmj_A 97 ---GINLVANSWGNSNVRAGDNIIISQ-------------------------MEHHANIVPWQMLCARVGAELRVIPLN- 147 (406)
T ss_dssp ---HHHHHHHHTHHHHCCTTCEEEEET-------------------------TCCGGGTHHHHHHHHHHTCEEEEECBC-
T ss_pred ---HHHHHHHHhhhhcCCCCCEEEEec-------------------------ccchHHHHHHHHHHHhCCCEEEEEecC-
Confidence 4554443332 44555555543 333332 2445566677643322210
Q ss_pred cccccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCcccc--CCCCCceEEEEec
Q psy8733 204 KYVSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTW--NRDPEASYLYYCD 281 (621)
Q Consensus 204 ~~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l--~i~~~t~~V~~th 281 (621)
. .| .+ +.+.+ .+++++++|.+++
T Consensus 148 ----------~-------------------~~--~~------------------------d~~~l~~~l~~~~~~v~~~~ 172 (406)
T 1kmj_A 148 ----------P-------------------DG--TL------------------------QLETLPTLFDEKTRLLAITH 172 (406)
T ss_dssp ----------T-------------------TS--CB------------------------CGGGHHHHCCTTEEEEEEES
T ss_pred ----------C-------------------CC--Cc------------------------CHHHHHHHhccCCeEEEEeC
Confidence 0 00 01 11111 2456899999999
Q ss_pred ccccccccccc-----ccccCCCcEEEecccccCCCcccccccc--eEEeccccccCCCccEEEEEchhHHhhhCCCCCc
Q psy8733 282 NETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIGPAGITVVIVREDLLEYALPITPT 354 (621)
Q Consensus 282 nET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lGP~Glg~livr~~ll~~~~~~~P~ 354 (621)
..|.+|...|+ +++++|+++|+|.+++.|..++++++++ ++++|.||.+||+|+|++++++++.+++.+....
T Consensus 173 ~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~~g~~G~G~~~~~~~~~~~~~~~~~~ 252 (406)
T 1kmj_A 173 VSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGG 252 (406)
T ss_dssp BCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSCTTCEEEEECHHHHHHCCCSSCS
T ss_pred CCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEEchhccCCCCcEEEEEeHHHHhhcCCcccC
Confidence 99999999995 4568999999999999999988887765 8889999999999999999999999887653321
Q ss_pred --eeec---c---cccc--CCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCccc
Q psy8733 355 --VFHF---K---INAD--NNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYE 418 (621)
Q Consensus 355 --~ld~---~---~~~~--~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~ 418 (621)
+.+. . .... .....+|+++..++++.++++++.+. |++.+.++.+++++++++.|++++|+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 325 (406)
T 1kmj_A 253 GSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSAL-GLNNIAEYEQNLMHYALSQLESVPDLTL 325 (406)
T ss_dssp TTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred CCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 1100 0 0001 11235789999999999999999877 8999999999999999999998865543
No 26
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.91 E-value=2.3e-22 Score=210.99 Aligned_cols=282 Identities=16% Similarity=0.111 Sum_probs=196.8
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
..+|++.+++.+.|++|++++.+.+.+....+.. .+++.+.+...+.+.|+.+++++|++.+ +|+|+ +|||+
T Consensus 16 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~y~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~t~--- 87 (390)
T 1elu_A 16 NKTYFNFGGQGILPTVALEAITAMYGYLQENGPF---SIAANQHIQQLIAQLRQALAETFNVDPN-TITIT-DNVTT--- 87 (390)
T ss_dssp TSEECCTTTCCCCCHHHHHHHHHHHHHHHHHCSS---SHHHHHHHHHHHHHHHHHHHHHTTSCGG-GEEEE-SSHHH---
T ss_pred CeEEecCCccCCCCHHHHHHHHHHHHHHhccCCc---chhhHHHHHHHHHHHHHHHHHHcCCCHH-HEEEe-CChHH---
Confidence 4689999999999999999999988664321110 1113445567899999999999998654 68876 67888
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHH--HHHHHHHhCCceeeecccccccc
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKK--AAAEAEKYGKVNLVIPKVSKYVS 207 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~--~~~~a~~~G~~~~~~~~~~~~~~ 207 (621)
+++++...+.+++||+|++.. .++.+.. |...++..|...+..+..
T Consensus 88 --a~~~~~~~~~~~~gd~vl~~~-------------------------~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 135 (390)
T 1elu_A 88 --GCDIVLWGLDWHQGDEILLTD-------------------------CEHPGIIAIVQAIAARFGITYRFFPVA----- 135 (390)
T ss_dssp --HHHHHHHHSCCCTTCEEEEET-------------------------TCCHHHHHHHHHHHHHHCCEEEEECCG-----
T ss_pred --HHHHHHhCCCCCCCCEEEEec-------------------------CcccHHHHHHHHHHHHhCcEEEEEcCC-----
Confidence 455544444445555555543 3334332 444566677643322210
Q ss_pred cCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccc
Q psy8733 208 IPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDG 287 (621)
Q Consensus 208 ~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tG 287 (621)
.++....+++++ + -.+++++++|.+++.+|.+|
T Consensus 136 -------------------------~~~~~~~d~~~l---------------------~-~~i~~~~~~v~~~~~~nptG 168 (390)
T 1elu_A 136 -------------------------ATLNQGDAAAVL---------------------A-NHLGPKTRLVILSHLLWNTG 168 (390)
T ss_dssp -------------------------GGSSSSCHHHHH---------------------H-TTCCTTEEEEEEESBCTTTC
T ss_pred -------------------------CCCCccchHHHH---------------------H-HhcCCCceEEEEeccccCCc
Confidence 000001222221 0 12456899999999999999
Q ss_pred ccccc-----ccc----cCCCcEEEecccccCCCcccccccc--eEEecccccc-CCCccEEEEEchhHHhhhCCCCCce
Q psy8733 288 VEFNY-----IPD----SQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNI-GPAGITVVIVREDLLEYALPITPTV 355 (621)
Q Consensus 288 v~~p~-----i~~----~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~l-GP~Glg~livr~~ll~~~~~~~P~~ 355 (621)
...|+ +++ ++|+++|+|.++++|..++++++++ +++.|.||++ ||.|+|++++++++++++.+....+
T Consensus 169 ~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~g~ 248 (390)
T 1elu_A 169 QVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGW 248 (390)
T ss_dssp CBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCCT
T ss_pred eecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEccccccccCCCceEEEEECHHhHhhcCCccccC
Confidence 99995 567 8999999999999999999987765 8999999966 6999999999999988775532110
Q ss_pred -----------eeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 356 -----------FHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 356 -----------ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
+++.... .....+|++...++++.++++++.+.|.++.+.++.+++++++++.|++++|+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 322 (390)
T 1elu_A 249 RSITYGAKGEPTGWAEGG-KRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQRSEFLWRGLNQLPHVHCL 322 (390)
T ss_dssp TTEEECTTSCEEEECSGG-GGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEES
T ss_pred CcccccccCcccccccch-HhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEe
Confidence 0111000 12235799999999999999999887449999999999999999999988666443
No 27
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.91 E-value=1.3e-22 Score=212.32 Aligned_cols=269 Identities=12% Similarity=0.059 Sum_probs=183.3
Q ss_pred ceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHH
Q psy8733 52 VINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAV 131 (621)
Q Consensus 52 ~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~ 131 (621)
+|++++++++.|++|++++.+.+.+..+...+ .++.+..+.+.+++.|+.+++++|++.+ +|+|+ +|||++
T Consensus 2 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~t~a---- 72 (382)
T 4eb5_A 2 AYFDYTSAKPVDERILEAMLPYMTESFGNPSS---VHSYGFKAREAVQEAREKVAKLVNGGGG-TVVFT-SGATEA---- 72 (382)
T ss_dssp CBCBTTTCCCCCHHHHHHHHHHHHTSCCCTTC---SSHHHHHHHHHHHHHHHHHHHHHTCTTE-EEEEE-SSHHHH----
T ss_pred eeeccCCCCCCCHHHHHHHHHHHHhccCCCCC---CcHHHHHHHHHHHHHHHHHHHHhCCCCC-eEEEc-CchHHH----
Confidence 69999999999999999999998653322211 2334566788999999999999999643 78876 678983
Q ss_pred HHHHhhhccC---CCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHH-HHHHHHHHhCCceeeecccccccc
Q psy8733 132 AMNLISSSMN---VPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSK-KAAAEAEKYGKVNLVIPKVSKYVS 207 (621)
Q Consensus 132 alNlla~~~~---~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~-~~~~~a~~~G~~~~~~~~~~~~~~ 207 (621)
++++...+. .++||+|++. ..++.+. .....+++.|...+..+..
T Consensus 73 -~~~~~~~l~~~~~~~gd~Vl~~-------------------------~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 121 (382)
T 4eb5_A 73 -NNLAIIGYAMRNARKGKHILVS-------------------------AVEHMSVINPAKFLQKQGFEVEYIPVG----- 121 (382)
T ss_dssp -HHHHHHHHHHHHGGGCCEEEEE-------------------------TTCCHHHHHHHHHHTTTTCEEEEECBC-----
T ss_pred -HHHHHHHHHhhccCCCCEEEEC-------------------------CCcchHHHHHHHHHHhCCcEEEEeccC-----
Confidence 443222221 1344444443 3333322 1222233356532222110
Q ss_pred cCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccc
Q psy8733 208 IPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDG 287 (621)
Q Consensus 208 ~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tG 287 (621)
+...++++++ + -.+++++++|.+++..|.||
T Consensus 122 ---------------------------~~~~~d~~~l---------------------~-~~i~~~~~~v~~~~~~nptG 152 (382)
T 4eb5_A 122 ---------------------------KYGEVDVSFI---------------------D-QKLRDDTILVSVQHANNEIG 152 (382)
T ss_dssp ---------------------------TTSCBCHHHH---------------------H-HHCCTTEEEEECCSBCTTTC
T ss_pred ---------------------------CCCccCHHHH---------------------H-HHhcCCCeEEEEeccCCCcc
Confidence 0000112221 1 12456789999999999999
Q ss_pred ccccc-----ccccCCCcEEEecccccCCCcccccccc--eEEeccccccCCCccEEEEEchhHHhhhCCCCCceeeccc
Q psy8733 288 VEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKI 360 (621)
Q Consensus 288 v~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lGP~Glg~livr~~ll~~~~~~~P~~ld~~~ 360 (621)
...|+ +++++|++ |+|.++++|..+++++.++ ++++|.||++||+|+|+++++++. ++. +.+..+.
T Consensus 153 ~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~--~l~---~~~~~~~- 225 (382)
T 4eb5_A 153 TIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSNDIYGPKGVGALWIRKEA--KLQ---PVILGGG- 225 (382)
T ss_dssp BBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEETGGGTCCSSCEEEEEETTC--CCC---CSSCSSC-
T ss_pred ccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEEEeehHHhcCCCceEEEEEcccc--ccC---ceecCCC-
Confidence 99985 45789999 9999999999988887654 899999999999999999999874 111 1111110
Q ss_pred cccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 361 NADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 361 ~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
.......+|++...++++.++++++.+ |++.+.++.+++++++++.|++++|+...
T Consensus 226 -~~~~~~~~~~~~~~~~~~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 281 (382)
T 4eb5_A 226 -QENGLRSGSENVPSIVGFGKAAEITAM--EWREEAERLRRLRDRIIDNVLKIEESYLN 281 (382)
T ss_dssp -TGGGTSCSCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTTSTTEEEC
T ss_pred -ccccccCCCccHHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHHhhCCCeEEe
Confidence 112244678999999999999998876 58999999999999999999988666543
No 28
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.91 E-value=4.8e-22 Score=210.55 Aligned_cols=300 Identities=15% Similarity=0.142 Sum_probs=202.2
Q ss_pred cchhccccccccchhhhhhccCCCCCceeccCCCCCCCHHHHHHHHHHHHhhccCCC-cccccccccHHHHHHHHHHHHH
Q psy8733 26 YLGNIIRNTYLDSRIHTTAMSSAAHPVINFGAGPAKLPREVLEEVKETLLDYESTGI-SVMEMSHRSADYTKINNDTQAA 104 (621)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~m~~~~~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~-sv~e~shrs~~f~~i~~~ar~~ 104 (621)
.+...+|..|+. .... +.+. ..+++.++.|.+.|++|++++.+.+.++..... + ..+.+..+.+.++++|+.
T Consensus 8 ~~~~~~r~~f~~--~~~~-~~g~-~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~---~~~y~~~~~~~~~~l~~~ 80 (420)
T 1t3i_A 8 SLAATVRQDFPI--LNQE-INGH-PLVYLDNAATSQKPRAVLEKLMHYYENDNANVHRG---AHQLSVRATDAYEAVRNK 80 (420)
T ss_dssp CHHHHHGGGCGG--GSCE-ETTE-ECEECBTTTCCCCCHHHHHHHHHHHHHTCCCC--C---CSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCc--cccc-cCCC-ceEEecCCccCCCCHHHHHHHHHHHHhccCCCCcc---cchHHHHHHHHHHHHHHH
Confidence 345566766651 1110 1111 357899999999999999999999876532210 1 122233456789999999
Q ss_pred HHHHhCCCCCCEEEEEcCCcchhhhHHHHHHhhhccC---CCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChH
Q psy8733 105 LRELLNVPNNYKILFLQGGGTGMFAAVAMNLISSSMN---VPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSW 181 (621)
Q Consensus 105 La~Ll~~p~~yeI~f~~gggT~~~~a~alNlla~~~~---~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~ 181 (621)
++++++.++..+|+|+ +|||+ +++++...++ +++||+|++.. .++.
T Consensus 81 la~~~~~~~~~~v~~~-~g~t~-----a~~~~~~~~~~~~~~~gd~Vl~~~-------------------------~~~~ 129 (420)
T 1t3i_A 81 VAKFINARSPREIVYT-RNATE-----AINLVAYSWGMNNLKAGDEIITTV-------------------------MEHH 129 (420)
T ss_dssp HHHHTTCSCGGGEEEE-SSHHH-----HHHHHHHHTHHHHCCTTCEEEEET-------------------------TCCG
T ss_pred HHHHcCCCCCCeEEEc-CChHH-----HHHHHHHHhhhcccCCCCEEEECc-------------------------chhH
Confidence 9999999433468887 67888 4444433332 44555555443 3333
Q ss_pred HH--HHHHHHHHhCCceeeecccccccccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCc
Q psy8733 182 SK--KAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKY 259 (621)
Q Consensus 182 ~~--~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~ 259 (621)
+. .|...++..|...+..+.. ..| .++++++
T Consensus 130 ~~~~~~~~~~~~~g~~~~~v~~~------------------------------~~~--~~d~~~l--------------- 162 (420)
T 1t3i_A 130 SNLVPWQMVAAKTGAVLKFVQLD------------------------------EQE--SFDLEHF--------------- 162 (420)
T ss_dssp GGTHHHHHHHHHHCCEEEEECBC------------------------------TTS--SBCHHHH---------------
T ss_pred HHHHHHHHHHHhcCcEEEEeccC------------------------------CCC--CcCHHHH---------------
Confidence 32 1445566777643322210 000 0112221
Q ss_pred cCCCCccccCCCCCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCcccccccc--eEEeccccccCC
Q psy8733 260 VSIPDQSTWNRDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIGP 332 (621)
Q Consensus 260 ~~ip~~~~l~i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lGP 332 (621)
+ -.+++++++|.+++..|.+|...|+ +++++|+++|+|.++++|..++++.+++ ++++|.||.+||
T Consensus 163 ------~-~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~ 235 (420)
T 1t3i_A 163 ------K-TLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHKMCAP 235 (420)
T ss_dssp ------H-HHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGGTTSC
T ss_pred ------H-HhhCCCceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCCCEEEEehhhhcCC
Confidence 0 1245689999999999999999985 4568999999999999999988887765 899999998899
Q ss_pred CccEEEEEchhHHhhhCCCCCc--eeec-----cccccC--CCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHH
Q psy8733 333 AGITVVIVREDLLEYALPITPT--VFHF-----KINADN--NSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKS 403 (621)
Q Consensus 333 ~Glg~livr~~ll~~~~~~~P~--~ld~-----~~~~~~--~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la 403 (621)
+|+|++++++++++++.+.... +.+. ..+... ....+|+++..++++.++++++.+. |++.+.++.++++
T Consensus 236 ~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~ 314 (420)
T 1t3i_A 236 TGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDL-GMENIHNYEVELT 314 (420)
T ss_dssp TTCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHH
T ss_pred CceEEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHH
Confidence 9999999999999887653221 1000 000011 1224799999999999999999887 8999999999999
Q ss_pred HHHHHHHHccCCccc
Q psy8733 404 VLLYQEIDNSDKFYE 418 (621)
Q Consensus 404 ~~L~e~L~~~~g~~~ 418 (621)
+++++.|++++|+..
T Consensus 315 ~~l~~~L~~~~g~~~ 329 (420)
T 1t3i_A 315 HYLWQGLGQIPQLRL 329 (420)
T ss_dssp HHHHHHHHTCTTEEE
T ss_pred HHHHHHHHhCCCeEE
Confidence 999999998866654
No 29
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.89 E-value=8e-22 Score=209.58 Aligned_cols=275 Identities=12% Similarity=0.145 Sum_probs=188.3
Q ss_pred ccCCCCCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccc-cHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCC
Q psy8733 45 MSSAAHPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHR-SADYTKINNDTQAALRELLNVPNNYKILFLQGG 123 (621)
Q Consensus 45 m~~~~~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shr-s~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gg 123 (621)
+|.....+|+++.++++.|++|++++.+.+.+..+... .+++ +..+.+.++++|+.+++++|++.+ +|+|+ +|
T Consensus 23 f~~~~~~~yld~~~~~~~~~~v~~a~~~~l~~~~~~~~----~~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g 96 (416)
T 1qz9_A 23 FALPEGVIYLDGNSLGARPVAALARAQAVIAEEWGNGL----IRSWNSAGWRDLSERLGNRLATLIGARDG-EVVVT-DT 96 (416)
T ss_dssp BCCCTTCEECCTTTSCCCBTTHHHHHHHHHHTCCCCCG----GGHHHHTSGGGHHHHHHHHHHTTTTCCTT-SEEEC-SC
T ss_pred CCCCCCeEeecCCCcCCCcHHHHHHHHHHHHHHHhccC----ccccchhhHHHHHHHHHHHHHHHcCCCcc-cEEEe-CC
Confidence 33333578999999999999999999998864211110 1111 112447788999999999999643 68886 67
Q ss_pred cchhhhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhh------CCCCcEEEEEcChHHH---HHHHHHHHh--
Q psy8733 124 GTGMFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLI------GRTGKADYVVTGSWSK---KAAAEAEKY-- 192 (621)
Q Consensus 124 gT~~~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~------~~g~~~~~v~tG~~~~---~~~~~a~~~-- 192 (621)
+|+++++ ++..++ .+|+++.++..+.|+. .+...++..
T Consensus 97 ~t~al~~-------------------------------al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~ 145 (416)
T 1qz9_A 97 TSINLFK-------------------------------VLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQ 145 (416)
T ss_dssp HHHHHHH-------------------------------HHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCS
T ss_pred hhHHHHH-------------------------------HHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcC
Confidence 8883332 122222 4566555555555653 222344444
Q ss_pred CCceeeecccccccccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCC
Q psy8733 193 GKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDP 272 (621)
Q Consensus 193 G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~ 272 (621)
|...+..+ . +++ .+. .+++
T Consensus 146 g~~~~~v~--------------------------------~-------~~~---------------------l~~-~i~~ 164 (416)
T 1qz9_A 146 GYTLRLVD--------------------------------S-------PEE---------------------LPQ-AIDQ 164 (416)
T ss_dssp SCEEEEES--------------------------------S-------GGG---------------------HHH-HCST
T ss_pred CceEEEeC--------------------------------c-------HHH---------------------HHH-HhCC
Confidence 65322111 0 011 011 2456
Q ss_pred CceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCcccccccc--eEEecccccc-CCCcc-EEEEEchh
Q psy8733 273 EASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNI-GPAGI-TVVIVRED 343 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~l-GP~Gl-g~livr~~ 343 (621)
++++|.+++..|.||...|+ +++++|+++|+|+++++|..++++++++ ++++|.||++ |++|+ |+++++++
T Consensus 165 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~l~~g~~~~g~l~~~~~ 244 (416)
T 1qz9_A 165 DTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQ 244 (416)
T ss_dssp TEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSSTTCCCTTCCCEEEECTT
T ss_pred CceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCcccCCCCCCCeEEEEECHH
Confidence 79999999999999999985 4567899999999999999998887764 8999999998 57777 99999999
Q ss_pred HHhhhCCCCCcee------eccccc-----cCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc
Q psy8733 344 LLEYALPITPTVF------HFKINA-----DNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN 412 (621)
Q Consensus 344 ll~~~~~~~P~~l------d~~~~~-----~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~ 412 (621)
+++++.+....+. ++.... .....++|+++..++++.++++++.+. |++++.++.+++++++++.|++
T Consensus 245 ~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~ 323 (416)
T 1qz9_A 245 LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQT-DMASLRRKSLALTDLFIELVEQ 323 (416)
T ss_dssp TTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTS-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHh
Confidence 8877655322210 100000 112345799999999999999998766 8999999999999999999988
Q ss_pred c-C--Cccc
Q psy8733 413 S-D--KFYE 418 (621)
Q Consensus 413 ~-~--g~~~ 418 (621)
+ + |+..
T Consensus 324 ~~~~~g~~~ 332 (416)
T 1qz9_A 324 RCAAHELTL 332 (416)
T ss_dssp HHTTSCCEE
T ss_pred hccCCCeEE
Confidence 5 4 4543
No 30
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.89 E-value=1.1e-20 Score=197.48 Aligned_cols=268 Identities=13% Similarity=0.040 Sum_probs=182.5
Q ss_pred ceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHH
Q psy8733 52 VINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAV 131 (621)
Q Consensus 52 ~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~ 131 (621)
+|++++++++.|++|++++.+.+.+....+.+ .++++..+.+.+.+.|+.+++++|++.+ +|+|+ +|||++
T Consensus 3 ~yld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~t~a---- 73 (384)
T 1eg5_A 3 VYFDNNATTRVDDRVLEEMIVFYREKYGNPNS---AHGMGIEANLHMEKAREKVAKVLGVSPS-EIFFT-SCATES---- 73 (384)
T ss_dssp EECBTTTCCCCCHHHHHHHHHHHHTCCCCTTC---SSHHHHHHHHHHHHHHHHHHHHHTSCGG-GEEEE-SCHHHH----
T ss_pred EEEecCccCCCCHHHHHHHHHHHHhcCCCCcc---ccHHHHHHHHHHHHHHHHHHHHcCCCCC-eEEEE-CCHHHH----
Confidence 79999999999999999999998652212111 2344556778899999999999998754 68876 678983
Q ss_pred HHHHhhhccC---CCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHH-HHHHHHHHhCCceeeecccccccc
Q psy8733 132 AMNLISSSMN---VPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSK-KAAAEAEKYGKVNLVIPKVSKYVS 207 (621)
Q Consensus 132 alNlla~~~~---~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~-~~~~~a~~~G~~~~~~~~~~~~~~ 207 (621)
++++...+. +++||+|++.. .++.+. .....++..|...+..+..
T Consensus 74 -~~~~~~~~~~~~~~~gd~vl~~~-------------------------~~~~~~~~~~~~~~~~g~~~~~v~~~----- 122 (384)
T 1eg5_A 74 -INWILKTVAETFEKRKRTIITTP-------------------------IEHKAVLETMKYLSMKGFKVKYVPVD----- 122 (384)
T ss_dssp -HHHHHHHHHHHTTTTCCEEEECT-------------------------TSCHHHHHHHHHHHHTTCEEEECCBC-----
T ss_pred -HHHHHHhhhhhccCCCCEEEECC-------------------------CCchHHHHHHHHHHhcCCEEEEEccC-----
Confidence 444332222 24555555443 222322 1222335556543222110
Q ss_pred cCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccc
Q psy8733 208 IPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDG 287 (621)
Q Consensus 208 ~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tG 287 (621)
..| .++++++ + -.+++++++|.+++..|.+|
T Consensus 123 -------------------------~~~--~~d~~~l---------------------~-~~i~~~~~~v~~~~~~nptG 153 (384)
T 1eg5_A 123 -------------------------SRG--VVKLEEL---------------------E-KLVDEDTFLVSIMAANNEVG 153 (384)
T ss_dssp -------------------------TTS--CBCHHHH---------------------H-HHCCTTEEEEEEESBCTTTC
T ss_pred -------------------------CCC--ccCHHHH---------------------H-HHhCCCCeEEEEECCCCCcc
Confidence 000 0112221 0 02456799999999999999
Q ss_pred ccccc-----ccccCC--CcEEEecccccCCCcccccccc--eEEeccccccCCCccEEEEEchhHHhhhCCCCCceeec
Q psy8733 288 VEFNY-----IPDSQG--IPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHF 358 (621)
Q Consensus 288 v~~p~-----i~~~~g--~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lGP~Glg~livr~~ll~~~~~~~P~~ld~ 358 (621)
...|+ +++++| +++|+|.++++|..++++++++ ++++|.||++||+|+|++++++++ ++. +.+..+
T Consensus 154 ~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~G~G~~~~~~~~--~~~---~~~~~~ 228 (384)
T 1eg5_A 154 TIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGV--PIR---PLIHGG 228 (384)
T ss_dssp BBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGGGTSCTTCEEEEECTTS--CCC---CSBCSS
T ss_pred cccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHHhcCCCceEEEEEcCCC--ccc---cccccC
Confidence 99995 456778 9999999999999988888764 999999999999999999999875 111 111111
Q ss_pred cccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCccc
Q psy8733 359 KINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYE 418 (621)
Q Consensus 359 ~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~ 418 (621)
. .......+|++...++++.++|+.+.+ +++++.++.+++++++++.|++ .|+..
T Consensus 229 ~--~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~~-~g~~~ 283 (384)
T 1eg5_A 229 G--QERGLRSGTQNVPGIVGAARAMEIAVE--ELSEAAKHMEKLRSKLVSGLMN-LGAHI 283 (384)
T ss_dssp C--TTTTTBCSCCCHHHHHHHHHHHHHHHH--THHHHHHHHHHHHHHHHHHHHT-TTCEE
T ss_pred c--ccccccCCCCChHHHHHHHHHHHHHHH--hHHHHHHHHHHHHHHHHHHhCC-CCeEE
Confidence 1 112234568999999999999998754 5899999999999999999988 44543
No 31
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.88 E-value=2.4e-21 Score=206.33 Aligned_cols=281 Identities=12% Similarity=0.050 Sum_probs=190.2
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
+.+|++.+++++.|++|++++.+.+.+....+..-...++.+....+.++++++.++++++++.+ +|+|+ +|||++++
T Consensus 22 ~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~v~~~-~ggt~a~~ 99 (423)
T 3lvm_A 22 LPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPR-EIVFT-SGATESDN 99 (423)
T ss_dssp SSEECBTTTCCCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEE-SSHHHHHH
T ss_pred CCEeecCCCcCCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCC-eEEEe-CChHHHHH
Confidence 57999999999999999999998875111111110002333456678899999999999999754 68886 67888433
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHH-HHHHHHHHhCCceeeeccccccccc
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSK-KAAAEAEKYGKVNLVIPKVSKYVSI 208 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~-~~~~~a~~~G~~~~~~~~~~~~~~~ 208 (621)
+ +...+ ...+.++|+++.+...++.+. .....+++.|...+..+..
T Consensus 100 ~-----a~~~l----------------------~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------ 146 (423)
T 3lvm_A 100 L-----AIKGA----------------------ANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQ------ 146 (423)
T ss_dssp H-----HHHHH----------------------HHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCC------
T ss_pred H-----HHHHH----------------------HHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccC------
Confidence 3 21111 000112345444433333332 1222335556543322210
Q ss_pred CCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccc
Q psy8733 209 PDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGV 288 (621)
Q Consensus 209 ~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv 288 (621)
+...++++++ + -.+++++++|.+++..|.+|.
T Consensus 147 --------------------------~~~~~d~~~l---------------------~-~~i~~~~~~v~~~~~~nptG~ 178 (423)
T 3lvm_A 147 --------------------------RNGIIDLKEL---------------------E-AAMRDDTILVSIMHVNNEIGV 178 (423)
T ss_dssp --------------------------TTSCCCHHHH---------------------H-HHCCTTEEEEECCSBCTTTCB
T ss_pred --------------------------CCCccCHHHH---------------------H-HhcCCCcEEEEEeCCCCCCcc
Confidence 0000111221 0 125568999999999999999
Q ss_pred cccc-----ccccCCCcEEEecccccCCCcccccccc--eEEeccccccCCCccEEEEEchhHHhhhCCCCCceeecccc
Q psy8733 289 EFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKIN 361 (621)
Q Consensus 289 ~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lGP~Glg~livr~~ll~~~~~~~P~~ld~~~~ 361 (621)
..|+ +++++|+++|+|.+++.+..++++.+++ ++++|.||++||+|+|+++++++..+++.+... .. .
T Consensus 179 ~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~~g~~g~G~~~~~~~~~~~~~~~~~---~~--~ 253 (423)
T 3lvm_A 179 VQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQMH---GG--G 253 (423)
T ss_dssp BCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSSC---SS--C
T ss_pred ccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEechHHhcCCCCeEEEEEeccccCCCCcccc---CC--c
Confidence 9995 4568899999999999999999998875 999999998899999999999887655433211 11 1
Q ss_pred ccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccCc
Q psy8733 362 ADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECP 420 (621)
Q Consensus 362 ~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~~ 420 (621)
.......+|++...++++.++++++.+. ++.+.++.+++++++++.|++++|+....
T Consensus 254 ~~~~~~~~~~~~~~~~a~~~al~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 310 (423)
T 3lvm_A 254 HERGMRSGTLPVHQIVGMGEAYRIAKEE--MATEMERLRGLRNRLWNGIKDIEEVYLNG 310 (423)
T ss_dssp TTTTTCCSCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTTSTTEEEES
T ss_pred ccccccCCCCCHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCCEEEeC
Confidence 1223456799999999999999998774 89999999999999999999887775543
No 32
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.88 E-value=2.2e-22 Score=219.01 Aligned_cols=275 Identities=15% Similarity=0.178 Sum_probs=191.5
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
..+|+++.++++.|+.|.+++.+.+..|...+...+..++ ..+.+..+++++.+++++|++.+ +|+|+ +|+|+
T Consensus 67 ~~iyld~~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~--~~~~~~~~~l~~~la~~~g~~~~-~v~~t-~g~t~--- 139 (465)
T 3e9k_A 67 NAIYFLGNSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGK--RPWITGDESIVGLMKDIVGANEK-EIALM-NALTV--- 139 (465)
T ss_dssp BCEECBTTTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSS--SCGGGTTHHHHGGGHHHHTCCGG-GEEEC-SCHHH---
T ss_pred CeEEecCCccCCChHHHHHHHHHHHHHHHhhCCcccccCC--ccHHHhHHHHHHHHHHHcCCCcC-CEEEE-CCHHH---
Confidence 5689999999999999999999988777655443222111 12445667889999999999754 78886 67888
Q ss_pred HHHHHHhhhcc--CCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHH--HHHHHHHHhCCcee-----eec
Q psy8733 130 AVAMNLISSSM--NVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSK--KAAAEAEKYGKVNL-----VIP 200 (621)
Q Consensus 130 a~alNlla~~~--~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~--~~~~~a~~~G~~~~-----~~~ 200 (621)
+++++..++ ..+.+|+|++... ++.+. .|...++..|.... +.+
T Consensus 140 --al~~~~~~~~~~~~~~~~Vl~~~~-------------------------~~~s~~~~~~~~~~~~G~~~~~~~v~~~~ 192 (465)
T 3e9k_A 140 --NLHLLMLSFFKPTPKRYKILLEAK-------------------------AFPSDHYAIESQLQLHGLNIEESMRMIKP 192 (465)
T ss_dssp --HHHHHHHHHCCCCSSSCEEEEETT-------------------------CCHHHHHHHHHHHHHTTCCHHHHEEEECC
T ss_pred --HHHHHHHHhccccCCCCEEEEcCC-------------------------cCCchHHHHHHHHHHcCCcceeeeEEEec
Confidence 566544332 2233444555443 22221 23445666775321 100
Q ss_pred ccccccccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCC---CCCceEE
Q psy8733 201 KVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNR---DPEASYL 277 (621)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i---~~~t~~V 277 (621)
. +..+ .+++|++ +. .+ .+++++|
T Consensus 193 ~------------------------------~~~~--~~d~~~l---------------------~~-~i~~~~~~~~lv 218 (465)
T 3e9k_A 193 R------------------------------EGEE--TLRIEDI---------------------LE-VIEKEGDSIAVI 218 (465)
T ss_dssp C------------------------------TTCS--SCCHHHH---------------------HH-HHHHHGGGEEEE
T ss_pred C------------------------------CCCC--ccCHHHH---------------------HH-HHHhcCCCeEEE
Confidence 0 0000 0111221 00 12 2579999
Q ss_pred EEecccccccccccc-----ccccCCCcEEEecccccCCCcccccccc--eEEecccccc--CCCccEEEEEchhHHhhh
Q psy8733 278 YYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNI--GPAGITVVIVREDLLEYA 348 (621)
Q Consensus 278 ~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~l--GP~Glg~livr~~ll~~~ 348 (621)
.+++..|.||...|+ +++++|+++++|+++++|..|+++++++ ++++|+||++ ||.|+|++++++++.+.+
T Consensus 219 ~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~ 298 (465)
T 3e9k_A 219 LFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTI 298 (465)
T ss_dssp EEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEEEECSSSTTCCCTTCCCEEEECGGGTTTS
T ss_pred EEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEEEECcccccccCCCceEEEEEcHHHHhhc
Confidence 999999999999996 4568999999999999999999998876 8999999999 588899999999998776
Q ss_pred CCCCCceeec--------cc---ccc--CCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 349 LPITPTVFHF--------KI---NAD--NNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 349 ~~~~P~~ld~--------~~---~~~--~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
.+....+... .. ... .+...+|||+..++++.++++++.+. |++++.++.+++++++++.|+++
T Consensus 299 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 375 (465)
T 3e9k_A 299 KPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQA-TMKALRKKSVLLTGYLEYLIKHN 375 (465)
T ss_dssp CCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHhh
Confidence 6543321100 00 000 11234699999999999999999998 89999999999999999999885
No 33
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.88 E-value=2e-21 Score=205.05 Aligned_cols=276 Identities=12% Similarity=0.074 Sum_probs=186.9
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
+.+|++.+++++.|++|++++.+.+.+....+.+ .+..+....+.++++|+.+++++|++.+ +|+|+ +|||+
T Consensus 20 ~~iyld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~~~~~-~v~~~-~g~t~--- 91 (400)
T 3vax_A 20 HMTYLDAAATTRVDQRVADIVLHWMTAEFGNAGS---RHEYGIRAKRGVERAREYLASTVSAEPD-ELIFT-SGATE--- 91 (400)
T ss_dssp --CCCCCCCCSSSCHHHHHHHHHHHHHHHSCSSC---HHHHHHHHHHHHHHHHHHHHHHTTCCGG-GEEEE-SCHHH---
T ss_pred CcEEecCCCCCCCCHHHHHHHHHHHHhccCCCcc---cchhHHHHHHHHHHHHHHHHHHcCCCCC-cEEEe-CCHHH---
Confidence 5799999999999999999999998764333222 1222445678899999999999999743 68886 67888
Q ss_pred HHHHHHhhhccC---CCCCc-eeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHH-HHHHHHHHhCCceeeeccccc
Q psy8733 130 AVAMNLISSSMN---VPNNY-KILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSK-KAAAEAEKYGKVNLVIPKVSK 204 (621)
Q Consensus 130 a~alNlla~~~~---~~~gd-~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~-~~~~~a~~~G~~~~~~~~~~~ 204 (621)
+++++...+. .++|| +|++... .+.+- .....+++.|...+..+..
T Consensus 92 --al~~~~~~l~~~~~~~gd~~Vl~~~~-------------------------~~~~~~~~~~~~~~~g~~~~~v~~~-- 142 (400)
T 3vax_A 92 --SNNIALLGLAPYGERTGRRHIITSAI-------------------------EHKAVLEPLEHLAGRGFEVDFLTPG-- 142 (400)
T ss_dssp --HHHHHHHTTHHHHHHHTCCEEEEETT-------------------------SCHHHHHHHHHHHTTTCEEEEECCC--
T ss_pred --HHHHHHHHHHHhhccCCCCEEEECcc-------------------------ccHhHHHHHHHHHhcCCeEEEEccC--
Confidence 4544433331 14555 5555432 11111 1112233456533222210
Q ss_pred ccccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccc
Q psy8733 205 YVSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNET 284 (621)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET 284 (621)
+...++++++ +-.+++++++|.+++..|
T Consensus 143 ------------------------------~~~~~d~~~l----------------------~~~i~~~~~~v~~~~~~n 170 (400)
T 3vax_A 143 ------------------------------PSGRISVEGV----------------------MERLRPDTLLVSLMHVNN 170 (400)
T ss_dssp ------------------------------TTCCCCHHHH----------------------HTTCCTTEEEEECCSBCT
T ss_pred ------------------------------CCCCcCHHHH----------------------HHhcCCCceEEEEECCCC
Confidence 0001112221 013567899999999999
Q ss_pred cccccccc-----ccccCCCcEEEecccccCCCcccccc-cceEEeccccccCCCccEEEE-EchhHHhhh-CCCCCcee
Q psy8733 285 VDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSK-FGVIIAGAQKNIGPAGITVVI-VREDLLEYA-LPITPTVF 356 (621)
Q Consensus 285 ~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~-~gvl~asaqK~lGP~Glg~li-vr~~ll~~~-~~~~P~~l 356 (621)
.+|...|+ +++++|+++|+|.+++++..++++.. .|++++|.||++||+|+|+++ ++++.+.+. ....+.+.
T Consensus 171 ptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~ 250 (400)
T 3vax_A 171 ETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTPIDMISISGHKIGAPKGVGALVTRRREEMDDERVPLEPIMF 250 (400)
T ss_dssp TTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSCCSEEEEETGGGTSCSSCEEEEECBCSSSTTCBCCCCCSSC
T ss_pred CceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhcCcEEEEeHHHhCCCCceEEEEEecchhccccccccCceec
Confidence 99999985 46789999999999999999998877 479999999987999999999 998433211 11112111
Q ss_pred eccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 357 HFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 357 d~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
.. ........+|+++..++++.++++++.+ +++++.++.+++++++++.|+ .+|+...
T Consensus 251 ~~--~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~~l~~~L~-~~~~~~~ 308 (400)
T 3vax_A 251 GG--GQERKLRPGTLPVPLIMGLAEAAKIFEA--EHAQWQVAAQDLRSRLLAGLA-STSFQVN 308 (400)
T ss_dssp SS--CTGGGTSCSCCCHHHHHHHHHHHHHHHH--SHHHHHHHHHHHHHHHHHHHT-TTTCEEC
T ss_pred CC--CceeeeecCCCCHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHhhC-CCCEEEe
Confidence 11 1122345689999999999999998865 699999999999999999998 7666544
No 34
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.85 E-value=5.7e-20 Score=196.82 Aligned_cols=288 Identities=16% Similarity=0.096 Sum_probs=183.3
Q ss_pred ccCCCCCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCc
Q psy8733 45 MSSAAHPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGG 124 (621)
Q Consensus 45 m~~~~~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~ggg 124 (621)
++.....+||+++++++.|++|++++.+.+.+......+ .+..+..+.+.++++|+.+++++|++.+ +|+|+ +||
T Consensus 13 ~~~~~~~~~Ld~~~~~~~~~~v~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~g~~~~-~v~~~-~g~ 87 (432)
T 3a9z_A 13 ESPPNRKVYMDYNATTPLEPEVIQAVTEAMKEAWGNPSS---SYVAGRKAKDIINTARASLAKMIGGKPQ-DIIFT-SGG 87 (432)
T ss_dssp -----CCEECBTTTCCCCCHHHHHHHHHHHHHCCSCTTC---SSHHHHHHHHHHHHHHHHHHHHHTCCGG-GEEEE-SCH
T ss_pred cCCCCCcEEeeCCccCCCCHHHHHHHHHHHHHhcCCCcc---CcHHHHHHHHHHHHHHHHHHHHcCCCcC-eEEEe-CCh
Confidence 343335789999999999999999999988653222211 1223456778999999999999999643 68886 678
Q ss_pred chhhhHHHHHHhhhccC-------CCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHH---HHHHHHHHhCC
Q psy8733 125 TGMFAAVAMNLISSSMN-------VPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSK---KAAAEAEKYGK 194 (621)
Q Consensus 125 T~~~~a~alNlla~~~~-------~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~---~~~~~a~~~G~ 194 (621)
|++ ++++...+. +++||+|++... .| ...+++ ++....+.. .|...+++.|.
T Consensus 88 t~a-----~~~~~~~~~~~~~~~~~~~gd~vl~~~p----~y--------~~~~~i-~~~~~~h~s~~~~~~~~~~~~g~ 149 (432)
T 3a9z_A 88 TES-----NNLVIHSTVRCFHEQQTLQGRTVDQISP----EE--------GTRPHF-ITCTVEHDSIRLPLEHLVEDQVA 149 (432)
T ss_dssp HHH-----HHHHHHHHHHHHHHHHHHC------------------------CCCEE-EEETTCCHHHHHHHHHHHHTTSC
T ss_pred HHH-----HHHHHHHHHhhhhhccccCCcccccccc----cc--------ccCCeE-EEecCcchhHHHHHHHHHHhcCc
Confidence 994 444333321 257888877653 22 111222 223322221 23344455565
Q ss_pred ceeeecccccccccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCc
Q psy8733 195 VNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEA 274 (621)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t 274 (621)
..+..+.. + + .+ .++++++ + -.+++++
T Consensus 150 ~v~~v~~~-----------~-~-----------------~~--~~d~~~l---------------------~-~~i~~~~ 176 (432)
T 3a9z_A 150 EVTFVPVS-----------K-V-----------------NG--QVEVEDI---------------------L-AAVRPTT 176 (432)
T ss_dssp EEEEECCC-----------T-T-----------------TS--SCCHHHH---------------------H-HTCCTTE
T ss_pred EEEEEecC-----------c-c-----------------cC--CcCHHHH---------------------H-HhccCCc
Confidence 43322210 0 0 00 0111121 0 1345689
Q ss_pred eEEEEecccccccccccc-----ccccCC----------CcEEEecccccCCCcccccccc--eEEeccccccCCCccEE
Q psy8733 275 SYLYYCDNETVDGVEFNY-----IPDSQG----------IPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIGPAGITV 337 (621)
Q Consensus 275 ~~V~~thnET~tGv~~p~-----i~~~~g----------~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lGP~Glg~ 337 (621)
++|.+++..|.||...|+ ++++++ +++|+|.+++.|..++++.+++ +++.|.||++||. +|+
T Consensus 177 ~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~~~~~~~~~d~~~~s~~K~~g~~-~G~ 255 (432)
T 3a9z_A 177 CLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGA 255 (432)
T ss_dssp EEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSCCCHHHHCCSEEEEEGGGTTCCS-CEE
T ss_pred eEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchhhhCCcccChhhcCCCEEEEehhHhcCCc-ceE
Confidence 999999999999999996 445667 9999999999999988887654 8899999999987 999
Q ss_pred EEEchhH-HhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCc
Q psy8733 338 VIVREDL-LEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKF 416 (621)
Q Consensus 338 livr~~l-l~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~ 416 (621)
++++++. ..++ .|.+++... ......+|++...++++.++++++.+ +++++.++.+++++++++.|++++|+
T Consensus 256 ~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~~~~~~~~a~~aal~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~g~ 328 (432)
T 3a9z_A 256 LYVRGVGKLTPL---YPMLFGGGQ--ERNFRPGTENTPMIAGLGKAADLVSE--NCETYEAHMRDIRDYLEERLEAEFGK 328 (432)
T ss_dssp EEETTBTTTBCC---CCSCCSSCG--GGGTSCSCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred EEEccccccCCc---CceeecCCc--cccccCCCcCHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 9999876 2222 232222211 12234579999999999999998865 68999999999999999999886444
No 35
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.78 E-value=3e-17 Score=171.44 Aligned_cols=269 Identities=15% Similarity=0.092 Sum_probs=170.6
Q ss_pred eccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHHHH
Q psy8733 54 NFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAVAM 133 (621)
Q Consensus 54 lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~al 133 (621)
+++.++++.+++|.+++.+.+.+... ..+..+...++.+++++.++++++++.+ +|+|+ +|||++++++..
T Consensus 34 ~~~~~~~~~~~~v~~a~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~la~~~~~~~~-~i~~~-~ggt~a~~~~~~ 104 (397)
T 3f9t_A 34 IFGSMCSNVLPITRKIVDIFLETNLG-------DPGLFKGTKLLEEKAVALLGSLLNNKDA-YGHIV-SGGTEANLMALR 104 (397)
T ss_dssp BCSCSCCCCCTHHHHHHHHHTTCCTT-------SGGGBHHHHHHHHHHHHHHHHHTTCTTC-EEEEE-SCHHHHHHHHHH
T ss_pred eEEEecCCCcHHHHHHHHHHHhhcCC-------CcccChhHHHHHHHHHHHHHHHhCCCCC-CEEEe-cCcHHHHHHHHH
Confidence 56666778888999999998743221 1122346778899999999999999765 78876 678984443111
Q ss_pred HHhhh-------ccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeeccccccc
Q psy8733 134 NLISS-------SMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYV 206 (621)
Q Consensus 134 Nlla~-------~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~ 206 (621)
.+... +.+-.+ |+++.+..+++.+ +...++..|...+..+..
T Consensus 105 ~~~~~~~~~~~~~~~~~~-------------------------gd~vl~~~~~~~~--~~~~~~~~g~~~~~v~~~---- 153 (397)
T 3f9t_A 105 CIKNIWREKRRKGLSKNE-------------------------HPKIIVPITAHFS--FEKGREMMDLEYIYAPIK---- 153 (397)
T ss_dssp HHHHHHHHHHHTTCCCCS-------------------------SCEEEEETTCCTH--HHHHHHHHTCEEEEECBC----
T ss_pred HHHHHHHhhhhhcccCCC-------------------------CeEEEECCcchhH--HHHHHHHcCceeEEEeeC----
Confidence 11000 001112 4444444444443 344556667643322210
Q ss_pred ccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCC-CceEEEEeccccc
Q psy8733 207 SIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDP-EASYLYYCDNETV 285 (621)
Q Consensus 207 ~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~-~t~~V~~thnET~ 285 (621)
+...++++++ +. .+++ ++++|.+++..|.
T Consensus 154 ----------------------------~~~~~d~~~l---------------------~~-~i~~~~~~~v~~~~~~np 183 (397)
T 3f9t_A 154 ----------------------------EDYTIDEKFV---------------------KD-AVEDYDVDGIIGIAGTTE 183 (397)
T ss_dssp ----------------------------TTSSBCHHHH---------------------HH-HHHHSCCCEEEEEBSCTT
T ss_pred ----------------------------CCCcCCHHHH---------------------HH-HHhhcCCeEEEEECCCCC
Confidence 0000112221 00 1334 7899999999999
Q ss_pred ccccccc-----ccccCCCcEEEecccccCCC--------------cccccc-cceEEeccccccC-CCccEEEEEchhH
Q psy8733 286 DGVEFNY-----IPDSQGIPLVSDMSSNFLSR--------------KFDVSK-FGVIIAGAQKNIG-PAGITVVIVREDL 344 (621)
Q Consensus 286 tGv~~p~-----i~~~~g~llvvDavSs~G~~--------------pIDv~~-~gvl~asaqK~lG-P~Glg~livr~~l 344 (621)
+|...|+ +++++|+++|+|.+++.+.. +++++. .+++++|.||+++ |.++|+++++++.
T Consensus 184 tG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~~~~g~~~~~~~~ 263 (397)
T 3f9t_A 184 LGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKMGHCPIPSGGILFKDIG 263 (397)
T ss_dssp TCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGGGTCSEEECCTTTTTCCCSSCEEEEESSGG
T ss_pred CCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhcccccccccccccccccccCCeEEEccccccCCCCCceEEEEeCHH
Confidence 9999885 45688999999999986543 555554 3489999999994 8899999998775
Q ss_pred HhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcc
Q psy8733 345 LEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFY 417 (621)
Q Consensus 345 l~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~ 417 (621)
+.+.......++.... .....+|++...+.++.++++++... +++++.++.+++++++++.|+++ |+.
T Consensus 264 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~ 331 (397)
T 3f9t_A 264 YKRYLDVDAPYLTETR---QATILGTRVGFGGACTYAVLRYLGRE-GQRKIVNECMENTLYLYKKLKEN-NFK 331 (397)
T ss_dssp GGGGTCEECTTSSSSE---ECSSCSSCCSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT-TCC
T ss_pred HHHhhccCCccccCCC---ccccccccccchHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHHHC-CCE
Confidence 4322111111211111 11223566656777888888888776 78999999999999999999987 453
No 36
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.77 E-value=6e-18 Score=176.37 Aligned_cols=267 Identities=13% Similarity=0.071 Sum_probs=169.2
Q ss_pred CCceecc-CCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHH-HHHHhCCCCCCEEEEEcCCcchh
Q psy8733 50 HPVINFG-AGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAA-LRELLNVPNNYKILFLQGGGTGM 127 (621)
Q Consensus 50 ~~~~lf~-aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~-La~Ll~~p~~yeI~f~~gggT~~ 127 (621)
..+|++. +++.+.|++|++++.+.+.+..+.+.+ ..++.+....+.+.+.|+. ++++++.+ +|+|+ +|||+
T Consensus 8 ~~i~ld~~~~~~~~~~~v~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~la~~~~~~---~v~~~-~g~t~- 80 (371)
T 2e7j_A 8 DFINIDPLQTGGKLTEEARQALLEWGDGYSVCDFC--TTGRLDEIKTPPIHDFIHNQLPKFLGCD---VARVT-NGARE- 80 (371)
T ss_dssp CCEECCHHHHTCCCCHHHHHHHHHC----------------------CCHHHHHHTHHHHHTTSS---EEEEE-SSHHH-
T ss_pred CcEEecccccCCCCCHHHHHHHHHHHhhcccCCcc--ccccchhhHHHHHHHHHHHHHHHHcCCC---EEEEe-CChHH-
Confidence 3467777 667789999999999887543211100 0122333456678899999 99999986 68876 66888
Q ss_pred hhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccc
Q psy8733 128 FAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVS 207 (621)
Q Consensus 128 ~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~ 207 (621)
+++++ +..++.+|+++.+..+++.+.... ++..|...+..+..
T Consensus 81 ----a~~~~--------------------------~~~~~~~gd~vl~~~~~~~~~~~~--~~~~g~~~~~v~~~----- 123 (371)
T 2e7j_A 81 ----AKFAV--------------------------MHSLAKKDAWVVMDENCHYSSYVA--AERAGLNIALVPKT----- 123 (371)
T ss_dssp ----HHHHH--------------------------HHHHCCTTCEEEEETTCCHHHHHH--HHHTTCEEEEECCC-----
T ss_pred ----HHHHH--------------------------HHHHhCCCCEEEEccCcchHHHHH--HHHcCCeEEEeecc-----
Confidence 33332 233334455554444455544322 56667543322200
Q ss_pred cCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCC-----CCceEEEEecc
Q psy8733 208 IPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRD-----PEASYLYYCDN 282 (621)
Q Consensus 208 ~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~-----~~t~~V~~thn 282 (621)
.++...++++++ +. .++ +++++|.+++.
T Consensus 124 -------------------------~~~~~~~d~~~l---------------------~~-~l~~~~~~~~~~~v~~~~~ 156 (371)
T 2e7j_A 124 -------------------------DYPDYAITPENF---------------------AQ-TIEETKKRGEVVLALITYP 156 (371)
T ss_dssp -------------------------CTTTCCCCHHHH---------------------HH-HHHHHTTTSCEEEEEEESS
T ss_pred -------------------------cCCCCCcCHHHH---------------------HH-HHHhhcccCCeEEEEEECC
Confidence 000001112221 00 112 57899999999
Q ss_pred cccccccccc-----ccccCCCcEEEecccccCCCcccccccc--eEEeccccccC-CCccEEEEEchhHHhh-hCCCCC
Q psy8733 283 ETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIG-PAGITVVIVREDLLEY-ALPITP 353 (621)
Q Consensus 283 ET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lG-P~Glg~livr~~ll~~-~~~~~P 353 (621)
.|.+|...|+ +++++|+++|+|.+++.|..++++.+++ ++++|.||+++ |.|+|+++++++++++ +.+...
T Consensus 157 ~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~~ 236 (371)
T 2e7j_A 157 DGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEK 236 (371)
T ss_dssp CTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSS
T ss_pred CCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcCCCEEEecCCcCCCCCCCcEEEEEechhhhhhcccccc
Confidence 9999999985 4568999999999999999988887765 99999999995 7799999999998776 543221
Q ss_pred ceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHH--HHHHHHHHHHHHccCCccc
Q psy8733 354 TVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNS--LQKSVLLYQEIDNSDKFYE 418 (621)
Q Consensus 354 ~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~--~~la~~L~e~L~~~~g~~~ 418 (621)
.+. .+.....+|++...++++.++++++.+ .+.++. +++++++++.|+++ |+..
T Consensus 237 ~~~-----~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~~~~~~~~~~~~l~~~L~~~-~~~~ 292 (371)
T 2e7j_A 237 YKN-----KEVELLGCTARGATIITLMASFPHVRE-----RIKRWDEEVEKARRFAAEMEKL-GIKQ 292 (371)
T ss_dssp CTT-----SBGGGTTCCCCSHHHHHHHHHHHHHHH-----HGGGHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred Ccc-----cccccccCCcCHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHc-CcEE
Confidence 110 001112578888889999999998764 556667 78888999999887 5543
No 37
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.75 E-value=1.9e-16 Score=171.22 Aligned_cols=270 Identities=13% Similarity=0.109 Sum_probs=169.2
Q ss_pred CceeccCCC--CCCCHHHHHHH--HHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcch
Q psy8733 51 PVINFGAGP--AKLPREVLEEV--KETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTG 126 (621)
Q Consensus 51 ~~~lf~aGP--s~~P~~Vlea~--~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~ 126 (621)
..+++++|+ .+.|+.|.+.+ .+.+..|.. + .+..++.+.++++++|+.+++++|++.. +|+|+ .|+|.
T Consensus 65 ~~~~~~~g~~~~~~p~~v~~~~~~~~~~~~~~~-----~-~~~~~~g~~~~~~~~~~~la~~~g~~~~-~i~~~-~g~ta 136 (438)
T 1wyu_A 65 HKAFLGGGVRSHHVPPVVQALAARGEFLTAYTP-----Y-QPEVSQGVLQATFEYQTMIAELAGLEIA-NASMY-DGATA 136 (438)
T ss_dssp TTCCCCSSCCCCCCCHHHHHHHTSHHHHHCCSC-----C-SGGGCHHHHHHHHHHHHHHHHHHTSSEE-CSCBS-SHHHH
T ss_pred cccccCCCccCCcCcHHHHHHHhcchhhhcCCC-----C-cchhhhhHHHHHHHHHHHHHHHhCCCcc-ceEEe-CcHHH
Confidence 356788887 66887774444 333333311 1 0113677889999999999999999743 56676 45775
Q ss_pred hhhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeeccccccc
Q psy8733 127 MFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYV 206 (621)
Q Consensus 127 ~~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~ 206 (621)
++|+ +++.. .+++||+|++... .|.+ +...|...|+..|...+..+..
T Consensus 137 a~ea--~~~a~---~~~~gd~Viv~~~----~h~s-------------------~~~~~~~~a~~~G~~v~~v~~~---- 184 (438)
T 1wyu_A 137 LAEG--VLLAL---RETGRMGVLVSQG----VHPE-------------------YRAVLRAYLEAVGAKLLTLPLE---- 184 (438)
T ss_dssp HHHH--HHHHH---HHHTCCEEEEETT----SCHH-------------------HHHHHHHHHHHTTCEEEEECCB----
T ss_pred HHHH--HHHHH---hcCCCCEEEEcCc----cCHh-------------------HHHHHHHHHHHCCCEEEEEcCc----
Confidence 4444 22221 2345666666543 1111 1123445566677643322100
Q ss_pred ccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccc
Q psy8733 207 SIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVD 286 (621)
Q Consensus 207 ~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~t 286 (621)
+ +.+ +.+. +++++++|.++|. |.+
T Consensus 185 ----------------------------~------------------------~~~-d~~~--i~~~t~~v~i~~p-n~t 208 (438)
T 1wyu_A 185 ----------------------------G------------------------GRT-PLPE--VGEEVGAVVVQNP-NFL 208 (438)
T ss_dssp ----------------------------T------------------------TBC-CCCC--CCTTEEEEEEESS-CTT
T ss_pred ----------------------------C------------------------Ccc-CHHH--hCCCeEEEEEECC-CCC
Confidence 0 001 1222 5678999999998 999
Q ss_pred cccccc-----ccccCCCcEEEecc-cccCCCccccccc--ceEEecccc-----cc-CCCccEEEEEchhHHhhhCCCC
Q psy8733 287 GVEFNY-----IPDSQGIPLVSDMS-SNFLSRKFDVSKF--GVIIAGAQK-----NI-GPAGITVVIVREDLLEYALPIT 352 (621)
Q Consensus 287 Gv~~p~-----i~~~~g~llvvDav-Ss~G~~pIDv~~~--gvl~asaqK-----~l-GP~Glg~livr~~ll~~~~~~~ 352 (621)
|...|+ +++++|+++++|+. +++|..+.+ .++ |++++|+|| |+ || |+|++++++++++++....
T Consensus 209 G~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~-~~~g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~~~~~l~~~~ 286 (438)
T 1wyu_A 209 GALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPP-GAYGADIAVGDGQSLGLPMGFGGP-HFGFLATKKAFVRQLPGRL 286 (438)
T ss_dssp SBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCH-HHHTCSEEEEECTTTTCCCGGGCS-CCEEEEECGGGGGGCCSCC
T ss_pred eEEecHHHHHHHHHHcCCEEEEEechhhccCcCCC-ccCCCCEEEECCcccCCCccCCCC-CeeEEEEcHHHHHhCCCce
Confidence 999986 45688999998866 668876555 445 488888998 67 57 9999999999887753321
Q ss_pred C----------c-eeecccccc-CCCccCCchH---HHHHHHHHH--HHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCC
Q psy8733 353 P----------T-VFHFKINAD-NNSVYNTPPT---FVVHVIQRV--FAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDK 415 (621)
Q Consensus 353 P----------~-~ld~~~~~~-~~s~~~TP~v---~~I~aL~~a--L~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g 415 (621)
- . .+++..... ......|+|+ ..+.++.++ ++++.++ |++++.++..++++++++.|++++|
T Consensus 287 ~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~~g 365 (438)
T 1wyu_A 287 VSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPE-GLREVALKSVEMAHKLHALLLEVPG 365 (438)
T ss_dssp EEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTSTT
T ss_pred eccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 0 0 011100000 0112356665 556666666 7877777 7999999999999999999999876
Q ss_pred cccC
Q psy8733 416 FYEC 419 (621)
Q Consensus 416 ~~~~ 419 (621)
+.+.
T Consensus 366 ~~~~ 369 (438)
T 1wyu_A 366 VRPF 369 (438)
T ss_dssp CEEC
T ss_pred eEEC
Confidence 6543
No 38
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.72 E-value=1.4e-15 Score=164.95 Aligned_cols=146 Identities=19% Similarity=0.107 Sum_probs=105.7
Q ss_pred CCCCceEEEEecccccccccccc-----cccc------CCCcEEEecccccCCC-------ccccc--ccceEEeccccc
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDS------QGIPLVSDMSSNFLSR-------KFDVS--KFGVIIAGAQKN 329 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~------~g~llvvDavSs~G~~-------pIDv~--~~gvl~asaqK~ 329 (621)
+++++++|.+++.+|.+|...|+ ++++ ++++++||++++.+.. +.+++ ..|++++++||+
T Consensus 184 i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~hK~ 263 (452)
T 2dgk_A 184 CDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKF 263 (452)
T ss_dssp CCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTT
T ss_pred HhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhcCCCCCcEEEECcccc
Confidence 56689999999999999999986 3455 4999999999987653 24443 344889999999
Q ss_pred c-CCCccEEEEEchh-HH-hhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q psy8733 330 I-GPAGITVVIVRED-LL-EYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLL 406 (621)
Q Consensus 330 l-GP~Glg~livr~~-ll-~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L 406 (621)
+ +|.|+|+++++++ .+ +.+. ..|.|+... .......+|.+...+.++.++++.+..+ |++++.++..++++++
T Consensus 264 ~~~~~~~G~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~r~~~~~~~~~aal~~lg~~-g~~~~~~~~~~~a~~l 339 (452)
T 2dgk_A 264 GLAPLGCGWVIWRDEEALPQELV-FNVDYLGGQ--IGTFAINFSRPAGQVIAQYYEFLRLGRE-GYTKVQNASYQVAAYL 339 (452)
T ss_dssp TCCCSSCEEEEESSGGGSCGGGC-EEECCTTCC--EEECCSCCSCBCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
T ss_pred cCCCCCeEEEEEcCHHHHHHHhc-cCccccCCC--CCCcccCCCChhHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHH
Confidence 8 5999999999865 33 3321 123232110 0011223455555667777788888776 7999999999999999
Q ss_pred HHHHHccCCcccC
Q psy8733 407 YQEIDNSDKFYEC 419 (621)
Q Consensus 407 ~e~L~~~~g~~~~ 419 (621)
++.|++++|+.+.
T Consensus 340 ~~~L~~~~~~~~~ 352 (452)
T 2dgk_A 340 ADEIAKLGPYEFI 352 (452)
T ss_dssp HHHHHTTSSEEEE
T ss_pred HHHHHhCCCeEEe
Confidence 9999998877654
No 39
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.71 E-value=6e-15 Score=163.21 Aligned_cols=279 Identities=11% Similarity=0.006 Sum_probs=171.4
Q ss_pred ceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCC--CCC--EEEEEcCCcchh
Q psy8733 52 VINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVP--NNY--KILFLQGGGTGM 127 (621)
Q Consensus 52 ~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p--~~y--eI~f~~gggT~~ 127 (621)
.++.+..++..|+.|.+++.+.+... .. ..+.++.+.++.+++++.+++++|++ .+. .-+|+ .|||+
T Consensus 58 ~~l~s~~t~~~~~~v~~~l~~~~~~~---~~----~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t-~ggte- 128 (502)
T 3hbx_A 58 LNLASFVTTWMEPECDKLIMSSINKN---YV----DMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGT-VGSSE- 128 (502)
T ss_dssp GBTTCCSCCCCCHHHHHHHHHTTTCB---TT----CTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEE-SSHHH-
T ss_pred ceeccccCCCCCHHHHHHHHHHhccC---CC----ChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceec-CcHHH-
Confidence 34455567888999999998876331 11 13457778899999999999999998 321 12244 56888
Q ss_pred hhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCC-----cEEEEEcChHHHHHHHHHHHhCCceeeeccc
Q psy8733 128 FAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTG-----KADYVVTGSWSKKAAAEAEKYGKVNLVIPKV 202 (621)
Q Consensus 128 ~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~-----~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~ 202 (621)
++++....+..+ + ......+|+ ++.+...++.+ +.+.++..|...+..+..
T Consensus 129 ----a~~~a~~a~~~~---------------~---~~~~~~~G~~~~~~~vi~~~~~h~s--~~~~~~~~G~~~~~v~~~ 184 (502)
T 3hbx_A 129 ----AIMLAGLAFKRK---------------W---QNKRKAEGKPVDKPNIVTGANVQVC--WEKFARYFEVELKEVKLS 184 (502)
T ss_dssp ----HHHHHHHHHHHH---------------H---HHHHHHTTCCCSCCEEEEETTCCHH--HHHHHHHTTCEEEEECCB
T ss_pred ----HHHHHHHHHHHH---------------H---hHHHHhcCCCCCCcEEEEcCCchHH--HHHHHHHcCceeEEEecC
Confidence 344321111000 0 000000122 22222222222 445566677643322210
Q ss_pred ccccccCCCCCCCCCCCccccccccCccccCccc-hhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEec
Q psy8733 203 SKYVSIPDQSTWNRDPEASYLYYCDNETVDGSWS-KKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCD 281 (621)
Q Consensus 203 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~-~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~th 281 (621)
+. -.+++|++ + -.+++++++|.+++
T Consensus 185 --------------------------------~~~~~~d~~~l---------------------~-~~i~~~t~~v~~~~ 210 (502)
T 3hbx_A 185 --------------------------------EGYYVMDPQQA---------------------V-DMVDENTICVAAIL 210 (502)
T ss_dssp --------------------------------TTBCSCCHHHH---------------------H-HHCCTTEEEEEEEB
T ss_pred --------------------------------CCcCcCCHHHH---------------------H-HHHhhCCEEEEEec
Confidence 00 00112221 0 13567899999999
Q ss_pred ccccccccccc-----ccccC------CCcEEEecccccC-------CCccccc--ccceEEecccccc-CCCccEEEEE
Q psy8733 282 NETVDGVEFNY-----IPDSQ------GIPLVSDMSSNFL-------SRKFDVS--KFGVIIAGAQKNI-GPAGITVVIV 340 (621)
Q Consensus 282 nET~tGv~~p~-----i~~~~------g~llvvDavSs~G-------~~pIDv~--~~gvl~asaqK~l-GP~Glg~liv 340 (621)
..|.+|...|+ +++++ |++++||++++.+ ..+.++. ..|++.+++||++ +|.|+|++++
T Consensus 211 ~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g~G~~~~ 290 (502)
T 3hbx_A 211 GSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIW 290 (502)
T ss_dssp SCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSSCEEEEE
T ss_pred CCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccCCCCceEEEECcccccCCCCCeEEEEE
Confidence 99999999986 44556 9999999999833 3445554 3458999999999 5999999999
Q ss_pred chhH-HhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 341 REDL-LEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 341 r~~l-l~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
+++. +.......+.|+... .......+|++...+.++..+++.+..+ |++.+.++..+++++|++.|.+++++.+.
T Consensus 291 ~~~~~l~~~~~~~~~yl~~~--~~~~~~~~sr~~~~~~a~~~al~~lg~~-g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 367 (502)
T 3hbx_A 291 RNKEDLPEELIFHINYLGAD--QPTFTLNFSKGSSQVIAQYYQLIRLGHE-GYRNVMENCRENMIVLREGLEKTERFNIV 367 (502)
T ss_dssp SSGGGSCGGGCEEECSSSSC--EEECCSCCSCBSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTTCEEEC
T ss_pred eCHHHhhHHhccCcccccCC--CCCccccCCchHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhCCCEEEE
Confidence 8653 322211112222111 1111223566666788888899988777 89999999999999999999999877654
Q ss_pred c
Q psy8733 420 P 420 (621)
Q Consensus 420 ~ 420 (621)
.
T Consensus 368 ~ 368 (502)
T 3hbx_A 368 S 368 (502)
T ss_dssp S
T ss_pred e
Confidence 3
No 40
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.70 E-value=3.6e-15 Score=155.56 Aligned_cols=245 Identities=15% Similarity=0.082 Sum_probs=150.8
Q ss_pred CCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHHHHHHhhh
Q psy8733 59 PAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAVAMNLISS 138 (621)
Q Consensus 59 Ps~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~alNlla~ 138 (621)
.+++|++|++++.+.+.+.. ...+ ..+++.|+.+++++|++ +++|+ +|||+ +++++..
T Consensus 8 ~~~~~~~v~~a~~~~~~~~~---------~~~~----~~~~~l~~~la~~~~~~---~v~~~-~ggt~-----al~~~~~ 65 (375)
T 2fnu_A 8 EPCLDKEDKKAVLEVLNSKQ---------LTQG----KRSLLFEEALCEFLGVK---HALVF-NSATS-----ALLTLYR 65 (375)
T ss_dssp CCCCCHHHHHHHHHHHTSSC---------CSSS----HHHHHHHHHHHHHHTCS---EEEEE-SCHHH-----HHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHcCc---------ccCC----hHHHHHHHHHHHHhCCC---eEEEe-CCHHH-----HHHHHHH
Confidence 46799999999999874311 0112 35788999999999986 68876 67898 5665555
Q ss_pred ccC--CCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCCCCCCCC
Q psy8733 139 SMN--VPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNR 216 (621)
Q Consensus 139 ~~~--~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~~ 216 (621)
.++ +++||+|++... ++.+. ...++..|...+..+..
T Consensus 66 ~~~~~~~~gd~Vl~~~~-------------------------~~~~~--~~~~~~~g~~~~~~~~~-------------- 104 (375)
T 2fnu_A 66 NFSEFSADRNEIITTPI-------------------------SFVAT--ANMLLESGYTPVFAGIK-------------- 104 (375)
T ss_dssp HSSCCCTTSCEEEECSS-------------------------SCTHH--HHHHHHTTCEEEECCBC--------------
T ss_pred HhcccCCCCCEEEECCC-------------------------ccHhH--HHHHHHCCCEEEEeccC--------------
Confidence 555 667777776653 22221 12234456543222110
Q ss_pred CCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCcccc--CCCCCceEEEEecccccccccccc--
Q psy8733 217 DPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTW--NRDPEASYLYYCDNETVDGVEFNY-- 292 (621)
Q Consensus 217 ~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l--~i~~~t~~V~~thnET~tGv~~p~-- 292 (621)
+...+ +.+.+ .+++++++|.++|. +|...|+
T Consensus 105 ------------------~~~~~------------------------d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~ 139 (375)
T 2fnu_A 105 ------------------NDGNI------------------------DELALEKLINERTKAIVSVDY---AGKSVEVES 139 (375)
T ss_dssp ------------------TTSSB------------------------CGGGSGGGCCTTEEEEEEECG---GGCCCCHHH
T ss_pred ------------------CCCCC------------------------CHHHHHhhcCcCceEEEEeCC---cCCccCHHH
Confidence 00001 11111 34568899888887 7999885
Q ss_pred ---ccccCCCcEEEecccccCCCccc--ccccc---eEEeccccccCCCccEEEEEc--hhHHhhhCCCCC-ceee---c
Q psy8733 293 ---IPDSQGIPLVSDMSSNFLSRKFD--VSKFG---VIIAGAQKNIGPAGITVVIVR--EDLLEYALPITP-TVFH---F 358 (621)
Q Consensus 293 ---i~~~~g~llvvDavSs~G~~pID--v~~~g---vl~asaqK~lGP~Glg~livr--~~ll~~~~~~~P-~~ld---~ 358 (621)
+++++|+++|+|.++++|..+.+ +..++ +..+|+||++|| |+|.++++ +++.+++.+... ...+ +
T Consensus 140 i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (375)
T 2fnu_A 140 VQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITT-AEGGAVVTNDSELHEKMKLFRSHGMLKKDFF 218 (375)
T ss_dssp HHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCC-SSCEEEEESCHHHHHHHHHHTBTTEEESSSS
T ss_pred HHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCCCCccc-cCceEEEeCCHHHHHHHHHHHhcCCcccccc
Confidence 45678999999999999987644 44443 556677899998 99999995 556665543111 0000 0
Q ss_pred cc-cccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 359 KI-NADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 359 ~~-~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
.. ....+..+.+++.... +.+.... +++.+.++.+++++++++.|++++|+...
T Consensus 219 ~~~~~~~~~~~~~~~~~~a------~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 273 (375)
T 2fnu_A 219 EGEVKSIGHNFRLNEIQSA------LGLSQLK-KAPFLMQKREEAALTYDRIFKDNPYFTPL 273 (375)
T ss_dssp CEEESSCCCBCCCCHHHHH------HHHHHHT-THHHHHHHHHHHHHHHHHHHTTCSSEEES
T ss_pred ccccccccccCCCCHHHHH------HHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCCcccc
Confidence 00 0001111233333332 2222233 78889999999999999999998766544
No 41
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.70 E-value=3.1e-15 Score=156.08 Aligned_cols=248 Identities=10% Similarity=0.063 Sum_probs=159.9
Q ss_pred CceeccCC--CCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhh
Q psy8733 51 PVINFGAG--PAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMF 128 (621)
Q Consensus 51 ~~~lf~aG--Ps~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~ 128 (621)
.++.|+.| |.+.|++|++++.+.+.++ ++.+ ...+.+.|+.++++++++.+ +|+|+ +|||+
T Consensus 33 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~-----------~~y~--~~~~~~lr~~la~~~~~~~~-~v~~~-~g~t~-- 95 (363)
T 3ffh_A 33 KITKLSSNENPLGTSKKVAAIQANSSVET-----------EIYP--DGWASSLRKEVADFYQLEEE-ELIFT-AGVDE-- 95 (363)
T ss_dssp CCEECSSCSCTTCCCHHHHHHHHTCBSCC-----------CBC------CHHHHHHHHHHHTCCGG-GEEEE-SSHHH--
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHHh-----------hcCC--CcchHHHHHHHHHHhCCChh-hEEEe-CCHHH--
Confidence 34445444 4457899999998865321 1112 12467899999999998654 68886 67888
Q ss_pred hHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeeccccccccc
Q psy8733 129 AAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSI 208 (621)
Q Consensus 129 ~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~ 208 (621)
++++ ++..++.+|+++.+..+++.+ +...++..|...+..+..
T Consensus 96 ---a~~~--------------------------~~~~~~~~gd~vl~~~~~~~~--~~~~~~~~g~~~~~v~~~------ 138 (363)
T 3ffh_A 96 ---LIEL--------------------------LTRVLLDTTTNTVMATPTFVQ--YRQNALIEGAEVREIPLL------ 138 (363)
T ss_dssp ---HHHH--------------------------HHHHHCSTTCEEEEEESSCHH--HHHHHHHHTCEEEEEECC------
T ss_pred ---HHHH--------------------------HHHHHccCCCEEEEcCCChHH--HHHHHHHcCCEEEEecCC------
Confidence 3433 333444556666555555443 445566777643332210
Q ss_pred CCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccc
Q psy8733 209 PDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGV 288 (621)
Q Consensus 209 ~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv 288 (621)
+...+++|++ + -.+++++++|++++..+.||.
T Consensus 139 --------------------------~~~~~d~~~l---------------------~-~~i~~~~~~v~~~~p~nptG~ 170 (363)
T 3ffh_A 139 --------------------------QDGEHDLEGM---------------------L-NAIDEKTTIVWICNPNNPTGN 170 (363)
T ss_dssp --------------------------TTSCCCHHHH---------------------H-HHCCTTEEEEEEESSCTTTCC
T ss_pred --------------------------CCCCcCHHHH---------------------H-HhcccCCCEEEEeCCCCCcCC
Confidence 0001122221 0 125578999999999999999
Q ss_pred cccc-----ccccC--CCcEEEecccccCCC-----cccc-cccc--eEEeccccccCCCcc--EEEEEchhHHhhhCCC
Q psy8733 289 EFNY-----IPDSQ--GIPLVSDMSSNFLSR-----KFDV-SKFG--VIIAGAQKNIGPAGI--TVVIVREDLLEYALPI 351 (621)
Q Consensus 289 ~~p~-----i~~~~--g~llvvDavSs~G~~-----pIDv-~~~g--vl~asaqK~lGP~Gl--g~livr~~ll~~~~~~ 351 (621)
..|. +.+.. |+++|+|.+++.+.. .+.. ...+ +++.|..|++|++|+ |++++++++++++.+.
T Consensus 171 ~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~ 250 (363)
T 3ffh_A 171 YIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADKEIIRQLNIV 250 (363)
T ss_dssp CCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECHHHHHHHHHT
T ss_pred CcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCHHHHHHHHHh
Confidence 9985 33333 999999999984331 1222 1223 667788899998888 9999999998766421
Q ss_pred CCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcc
Q psy8733 352 TPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFY 417 (621)
Q Consensus 352 ~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~ 417 (621)
. ..+++|....+++.++|+.. . .++.+.++.+++.+++++.|+++.|+.
T Consensus 251 ~--------------~~~~~~~~~~~~~~~~l~~~--~-~~~~~~~~~~~~~~~l~~~l~~~~g~~ 299 (363)
T 3ffh_A 251 R--------------PPFNTTSIGQKLAIEAIKDQ--A-FIGECRTSNANGIKQYEAFAKRFEKVK 299 (363)
T ss_dssp C--------------CSCCCBHHHHHHHHHHHHCH--H-HHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred C--------------CCCCCCHHHHHHHHHHhcCH--H-HHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 1 13467788888888888632 2 578889999999999999999854453
No 42
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.65 E-value=1.1e-14 Score=160.20 Aligned_cols=282 Identities=12% Similarity=0.072 Sum_probs=163.5
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
+..|+++...+++|++|++++.....+. +.. ....++.+.++-+++++.+++++|.++..+++|+ +|||++..
T Consensus 100 ~~~yl~~~~~~~~~~~v~~~~~~~~~n~---~~~---~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t-~ggt~a~~ 172 (497)
T 2qma_A 100 HPDCIAHLHTPPLMPAVAAEAMIAALNQ---SMD---SWDQASSATYVEQKVVNWLCDKYDLSEKADGIFT-SGGTQSNQ 172 (497)
T ss_dssp STTBCSSSCCCCBHHHHHHHHHHHHHCC---CTT---CGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEE-SSHHHHHH
T ss_pred CCCeeEeCCCCCcHHHHHHHHHHHhhcc---ccc---chhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEc-CCchHHHH
Confidence 4679999999999999999998776432 111 2334677778888889999999999764578887 67998433
Q ss_pred HHHHHHhhh-cc-----------CCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEE-cChHHHHHHHHHHHhCC--
Q psy8733 130 AVAMNLISS-SM-----------NVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVV-TGSWSKKAAAEAEKYGK-- 194 (621)
Q Consensus 130 a~alNlla~-~~-----------~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~-tG~~~~~~~~~a~~~G~-- 194 (621)
. ++..... .+ |++. . .|+...++. .++++ +.+.++..|.
T Consensus 173 ~-al~~ar~~~~~~~~~~~~~~~G~~~---------------------~--~g~~~v~~s~~~h~s--~~~~~~~~g~g~ 226 (497)
T 2qma_A 173 M-GLMLARDWIADKLSGHSIQKLGLPD---------------------Y--ADKLRIVCSKKSHFT--VQKSASWMGLGE 226 (497)
T ss_dssp H-HHHHHHHHHHHHHHCCCHHHHCSCG---------------------G--GGGEEEEEETTSCTH--HHHHHHHTTSCG
T ss_pred H-HHHHHHHHHHHhhcccchhhccccc---------------------c--cCCeEEEECCCchHH--HHHHHHHcCCCc
Confidence 3 1111100 00 0000 0 012122222 23333 2233444443
Q ss_pred -ceeeecccccccccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccC--CC
Q psy8733 195 -VNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWN--RD 271 (621)
Q Consensus 195 -~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~--i~ 271 (621)
..+..+.. ... .+++++++ +.+. ..
T Consensus 227 ~~v~~v~~~-------------~~~-------------------~~d~~~L~--------------------~~i~~~~~ 254 (497)
T 2qma_A 227 KAVMTVDAN-------------ADG-------------------TMDITKLD--------------------EVIAQAKA 254 (497)
T ss_dssp GGEEEECBC-------------TTS-------------------SBCGGGHH--------------------HHHHHHHH
T ss_pred ccEEEEecC-------------CCC-------------------cCCHHHHH--------------------HHHHHHHH
Confidence 11111100 000 01111110 0010 01
Q ss_pred CCc--eEEEEecccccccccccc-----ccccCCCcEEEecccccCCCccc----ccc---cceEEeccccccC-CCccE
Q psy8733 272 PEA--SYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFD----VSK---FGVIIAGAQKNIG-PAGIT 336 (621)
Q Consensus 272 ~~t--~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pID----v~~---~gvl~asaqK~lG-P~Glg 336 (621)
.++ .+|.+++..|.+|...|+ +++++|++++||++++.+..+.+ ++. .|+++++.|||++ |.|+|
T Consensus 255 ~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~~G 334 (497)
T 2qma_A 255 EGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVERAHSISVDFHKLFYQTISCG 334 (497)
T ss_dssp TTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSSCE
T ss_pred CCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcccCCEEEEcchhccCCCcceE
Confidence 123 488999999999998886 45688999999999999988776 333 3689999999995 99999
Q ss_pred EEEEchhH-HhhhCCCCCceeeccccc--c--CCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 337 VVIVREDL-LEYALPITPTVFHFKINA--D--NNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 337 ~livr~~l-l~~~~~~~P~~ld~~~~~--~--~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
+++++++. ++.+.. .+.|+...... . ......|-. +....+..+++.+..+ |++++.++..++++++++.|+
T Consensus 335 ~l~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~r~-~~al~~~~~l~~lg~~-g~~~~~~~~~~~a~~l~~~L~ 411 (497)
T 2qma_A 335 ALLVNDKSNFKFLLH-HADYLNREHDELPNLVDKSIATTKR-FDALKVFMTMQNVGPK-ALGDMYDHLLAQTLEVADMIR 411 (497)
T ss_dssp EEEESCGGGGGGGCC---------------------CCSCC-CTHHHHHHHHHHTCHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCHHHHHHhcC-CchhcCCccccCCCccccCCCCCCc-hhHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 99998765 333321 22232111000 0 000000000 1123445577777655 789999999999999999999
Q ss_pred ccCCcccC
Q psy8733 412 NSDKFYEC 419 (621)
Q Consensus 412 ~~~g~~~~ 419 (621)
+++|+.+.
T Consensus 412 ~~~~~~~~ 419 (497)
T 2qma_A 412 TNDQFELL 419 (497)
T ss_dssp TCTTEEEC
T ss_pred hCCCeEEE
Confidence 98777653
No 43
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.65 E-value=9.7e-14 Score=152.04 Aligned_cols=147 Identities=14% Similarity=0.101 Sum_probs=111.8
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCCCcEEEecccccC-----------CC-cccccccc--eEEecccccc
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFL-----------SR-KFDVSKFG--VIIAGAQKNI 330 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G-----------~~-pIDv~~~g--vl~asaqK~l 330 (621)
+++++++|.+++..|.+|...|+ +++++|+++|+|++++.+ .. +++...+| ++++++||++
T Consensus 203 i~~~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g~d~~~~s~~K~l 282 (497)
T 3mc6_A 203 INKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPGVTSISCDTHKYG 282 (497)
T ss_dssp CCSSEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTTCCEEEEETTTTT
T ss_pred HhhCCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCCCcEEEECchhhc
Confidence 56789999999999999999886 346899999999998732 23 46665554 9999999998
Q ss_pred -CCCccEEEEEchhHHhhhCCC-CCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Q psy8733 331 -GPAGITVVIVREDLLEYALPI-TPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQ 408 (621)
Q Consensus 331 -GP~Glg~livr~~ll~~~~~~-~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e 408 (621)
||.|+|+++++++.+.+.... .+.+.. .........+|.+...+.++.++++.+.+. |++++.++..++++++++
T Consensus 283 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~a~~aal~~l~~~-~~~~~~~~~~~~~~~l~~ 359 (497)
T 3mc6_A 283 FAPKGSSVIMYRNSDLRMHQYYVNPAWTG--GLYGSPTLAGSRPGAIVVGCWATMVNMGEN-GYIESCQEIVGAAMKFKK 359 (497)
T ss_dssp CCCSSCEEEECSSHHHHTTTSCCBTTCTT--SCBCCSSSCSSCBHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCceeEEecCHHHHhhhhcccccccC--CCcCCcCcccCCcchhHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHH
Confidence 699999999998877644221 121110 001122344677778889999999999887 899999999999999999
Q ss_pred HHHc-cCCcccC
Q psy8733 409 EIDN-SDKFYEC 419 (621)
Q Consensus 409 ~L~~-~~g~~~~ 419 (621)
.|.+ ++|+...
T Consensus 360 ~L~~~~~g~~~~ 371 (497)
T 3mc6_A 360 YIQENIPDLDIM 371 (497)
T ss_dssp HHHHSCTTCEEC
T ss_pred HHHhcCCCEEEe
Confidence 9999 6766543
No 44
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.64 E-value=2.3e-15 Score=165.74 Aligned_cols=141 Identities=12% Similarity=0.134 Sum_probs=101.9
Q ss_pred CCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCcccccc-----cceEEecccccc-CCCccEEEEE
Q psy8733 272 PEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSK-----FGVIIAGAQKNI-GPAGITVVIV 340 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~-----~gvl~asaqK~l-GP~Glg~liv 340 (621)
+++++|.+ +..+.+ ...|+ +++++|+++++|++++.|..+.++.. .|++++|.||+| ||.| |++++
T Consensus 192 ~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~~~div~~s~~K~l~Gprg-G~i~~ 268 (483)
T 1rv3_A 192 FHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFEHCHVVTTTTHKTLRGCRA-GMIFY 268 (483)
T ss_dssp HCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGGTCSEEEEESSGGGCCCSC-EEEEE
T ss_pred cCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCCCCcEEEecCcccCCCCCc-eEEEE
Confidence 57899988 666655 66775 56789999999999987766655543 359999999999 7999 99999
Q ss_pred chhHHhhhCCCC--Cceeecccc---ccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCC
Q psy8733 341 REDLLEYALPIT--PTVFHFKIN---ADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDK 415 (621)
Q Consensus 341 r~~ll~~~~~~~--P~~ld~~~~---~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g 415 (621)
++++.. +.... ....++... ...+...+||+...+.++..|++++.+. +++.+.++..++++++++.|.+. |
T Consensus 269 ~~~~~~-~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g 345 (483)
T 1rv3_A 269 RRGVRS-VDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTP-EFKEYQRQVVANCRALSAALVEL-G 345 (483)
T ss_dssp ECSBCC--------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred cchhhh-hccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhCh-hHHHHHHHHHHHHHHHHHHHHhc-C
Confidence 987431 11000 000011100 0112346899999999999999998766 78999999999999999999987 4
Q ss_pred ccc
Q psy8733 416 FYE 418 (621)
Q Consensus 416 ~~~ 418 (621)
+.+
T Consensus 346 ~~~ 348 (483)
T 1rv3_A 346 YKI 348 (483)
T ss_dssp CEE
T ss_pred CEe
Confidence 543
No 45
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.63 E-value=2.8e-14 Score=157.94 Aligned_cols=147 Identities=11% Similarity=0.011 Sum_probs=101.1
Q ss_pred CceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCccc-----cccc---ceEEeccccccC-CCccEEE
Q psy8733 273 EASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFD-----VSKF---GVIIAGAQKNIG-PAGITVV 338 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pID-----v~~~---gvl~asaqK~lG-P~Glg~l 338 (621)
++++|++++..|.+|...|+ +++++|++++||++++.+..+.+ ++.+ |++++++|||+| |.|+|++
T Consensus 259 ~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g~G~l 338 (515)
T 2jis_A 259 VPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQRADSVAWNPHKLLAAGLQCSAL 338 (515)
T ss_dssp EEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEE
T ss_pred CcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCccCCEEEECcccccCCCCCeeEE
Confidence 48999999999999999986 45688999999999999998776 5443 599999999996 9999999
Q ss_pred EEchh--HHhhhCCCCCceeeccccc-cCCCccCCchHH-----HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Q psy8733 339 IVRED--LLEYALPITPTVFHFKINA-DNNSVYNTPPTF-----VVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEI 410 (621)
Q Consensus 339 ivr~~--ll~~~~~~~P~~ld~~~~~-~~~s~~~TP~v~-----~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L 410 (621)
+++++ ++++.....+.|+...... .....++|+++. ....+..+++.+... |++++.++..++++++++.|
T Consensus 339 ~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~-g~~~~~~~~~~~a~~l~~~L 417 (515)
T 2jis_A 339 LLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQ-GLERRIDQAFVLARYLVEEM 417 (515)
T ss_dssp EESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred EEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHH
Confidence 99988 6665433233333111000 000001111100 112333446666666 79999999999999999999
Q ss_pred HccCCcccCc
Q psy8733 411 DNSDKFYECP 420 (621)
Q Consensus 411 ~~~~g~~~~~ 420 (621)
++++|+.+..
T Consensus 418 ~~~~g~~~~~ 427 (515)
T 2jis_A 418 KKREGFELVM 427 (515)
T ss_dssp HTSTTEEESS
T ss_pred hcCCCEEEeC
Confidence 9988776653
No 46
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.63 E-value=2.1e-15 Score=155.88 Aligned_cols=260 Identities=14% Similarity=0.142 Sum_probs=154.9
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
..+|+++.++++.|++|++++.+.+..|.. +....+..+++++.+++++|++.+ +|+|+ +|||++
T Consensus 14 ~~i~l~~~~~~~~~~~v~~a~~~~~~~~~~-----------~~g~~~~~~~~~~~l~~~~g~~~~-~v~~~-~g~t~a-- 78 (359)
T 1svv_A 14 KPYSFVNDYSVGMHPKILDLMARDNMTQHA-----------GYGQDSHCAKAARLIGELLERPDA-DVHFI-SGGTQT-- 78 (359)
T ss_dssp -CEECSCSCSSCCCHHHHHHHHHHTTCCCC-----------STTCSHHHHHHHHHHHHHHTCTTS-EEEEE-SCHHHH--
T ss_pred eeEEecCCCcCCCCHHHHHHHHHHHhhccc-----------cccccHHHHHHHHHHHHHhCCCCc-cEEEe-CCchHH--
Confidence 467888888889999999999998754321 011235778899999999998654 78886 678983
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccC
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIP 209 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 209 (621)
++++...+ +++||+|++.. +++.+......++..|...+..+.
T Consensus 79 ---~~~~~~~~-~~~gd~vl~~~-------------------------~~~~~~~~~~~~~~~g~~~~~v~~-------- 121 (359)
T 1svv_A 79 ---NLIACSLA-LRPWEAVIATQ-------------------------LGHISTHETGAIEATGHKVVTAPC-------- 121 (359)
T ss_dssp ---HHHHHHHH-CCTTEEEEEET-------------------------TSHHHHSSTTHHHHTTCCEEEECC--------
T ss_pred ---HHHHHHHH-hCCCCEEEEcc-------------------------cchHHHHHHHHHhcCCCeeEEEeC--------
Confidence 33322222 23455555544 333332111123455653222110
Q ss_pred CCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccccc
Q psy8733 210 DQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVE 289 (621)
Q Consensus 210 ~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~ 289 (621)
+ .|. +++++++. .+. .....-.+++++|.+++. |.+|..
T Consensus 122 ----------------------~-~~~--~d~~~l~~--------------~l~-~~~~~~~~~~~~v~~~~~-~ptG~~ 160 (359)
T 1svv_A 122 ----------------------P-DGK--LRVADIES--------------ALH-ENRSEHMVIPKLVYISNT-TEVGTQ 160 (359)
T ss_dssp ----------------------T-TSC--CCHHHHHH--------------HHH-HSCSTTSCEEEEEEEESS-CTTSCC
T ss_pred ----------------------C-CCe--ecHHHHHH--------------HHH-HHHhccCCCceEEEEEcC-CCCcee
Confidence 0 011 11222100 000 000001124899999988 789999
Q ss_pred cc---c-----ccccCCCcEEEeccc---ccCCCcccccc------cceEEeccccccCCCccEEEEEchhHHhhhCCCC
Q psy8733 290 FN---Y-----IPDSQGIPLVSDMSS---NFLSRKFDVSK------FGVIIAGAQKNIGPAGITVVIVREDLLEYALPIT 352 (621)
Q Consensus 290 ~p---~-----i~~~~g~llvvDavS---s~G~~pIDv~~------~gvl~asaqK~lGP~Glg~livr~~ll~~~~~~~ 352 (621)
.| + +++++|+++|+|.++ ++|..+.+... .+++..++||+.||.|+|++++++++++++.+.
T Consensus 161 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g~~~~~g~l~~~~~~~~~~~~~- 239 (359)
T 1svv_A 161 YTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAGGMFGEALIILNDALKPNARHL- 239 (359)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTTCSSCEEEEECSGGGCTTHHHH-
T ss_pred cCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCCCCCceEEEEEcccHHHHHHHH-
Confidence 87 2 346789999999999 77777766553 248889999987799999999999887654320
Q ss_pred CceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcc
Q psy8733 353 PTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFY 417 (621)
Q Consensus 353 P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~ 417 (621)
.. ..+..+.+ +.....++ .+++.+ ++++++.++.+++++++++.| +.+|+.
T Consensus 240 ---~~-----~~~~~~~~-~~~~~~~~---~~~l~~-~~~~~~~~~~~~~~~~l~~~L-~~~~~~ 290 (359)
T 1svv_A 240 ---IK-----QRGALMAK-GWLLGIQF---EVLMKD-NLFFELGAHSNKMAAILKAGL-EACGIR 290 (359)
T ss_dssp ---HH-----HTTCCCTT-THHHHHHH---HHHTST-THHHHHHHHHHHHHHHHHHHH-HHTTCC
T ss_pred ---Hh-----cCCccccc-chhhHHHH---HHHHhh-hhHHHHHHHHHHHHHHHHHHh-ccCCeE
Confidence 00 01111111 11222222 233444 368889999999999999999 455443
No 47
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.63 E-value=4.6e-14 Score=147.33 Aligned_cols=246 Identities=11% Similarity=0.081 Sum_probs=158.2
Q ss_pred ceeccC--CCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 52 VINFGA--GPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 52 ~~lf~a--GPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
++.|+. .|.+.|++|++++.+.+..+...+ +. ...+.|+.+++++|++.+ +|+|+ +|||+
T Consensus 32 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~y~-------~~------~~~~lr~~la~~~~~~~~-~v~~~-~g~~~--- 93 (365)
T 3get_A 32 VIKLASNENPFGTPPKAIECLRQNANKAHLYP-------DD------SMIELKSTLAQKYKVQNE-NIIIG-AGSDQ--- 93 (365)
T ss_dssp CEECSSCCCTTCSCHHHHHHHHHHGGGTTSCC-------CT------TCHHHHHHHHHHHTCCGG-GEEEE-SSHHH---
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHHhhccCC-------CC------ChHHHHHHHHHHhCCCcc-eEEEC-CCHHH---
Confidence 344443 345688999999999875332211 10 014789999999998654 68876 67888
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccC
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIP 209 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 209 (621)
+++++ +..++.+|+++.+..+++.+ +...++..|...+..+.
T Consensus 94 --a~~~~--------------------------~~~l~~~gd~vl~~~~~~~~--~~~~~~~~g~~~~~v~~-------- 135 (365)
T 3get_A 94 --VIEFA--------------------------IHSKLNSKNAFLQAGVTFAM--YEIYAKQCGAKCYKTQS-------- 135 (365)
T ss_dssp --HHHHH--------------------------HHHHCCTTCEEEECSSCCTH--HHHHHHHHTCEEEECSS--------
T ss_pred --HHHHH--------------------------HHHHhCCCCEEEEeCCChHH--HHHHHHHcCCEEEEEec--------
Confidence 34432 23333444444443333332 34456667764322110
Q ss_pred CCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccccc
Q psy8733 210 DQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVE 289 (621)
Q Consensus 210 ~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~ 289 (621)
.++.. +++|++ +. .+++++++|++++..|.||..
T Consensus 136 -----------------------~~~~~-~d~~~l---------------------~~-~l~~~~~~v~~~~p~nptG~~ 169 (365)
T 3get_A 136 -----------------------ITHNL-DEFKKL---------------------YE-THKDEIKLIFLCLPNNPLGEC 169 (365)
T ss_dssp -----------------------SSCCH-HHHHHH---------------------HH-HTTTTEEEEEEESSCTTTCCC
T ss_pred -----------------------CCCCC-CCHHHH---------------------HH-HhCCCCCEEEEcCCCCCCCCC
Confidence 01122 344442 11 245789999999999999999
Q ss_pred ccc-----ccc--cCCCcEEEecccc------cCCCcccccc----cc--eEEeccccccCCCc--cEEEEEchhHHhhh
Q psy8733 290 FNY-----IPD--SQGIPLVSDMSSN------FLSRKFDVSK----FG--VIIAGAQKNIGPAG--ITVVIVREDLLEYA 348 (621)
Q Consensus 290 ~p~-----i~~--~~g~llvvDavSs------~G~~pIDv~~----~g--vl~asaqK~lGP~G--lg~livr~~ll~~~ 348 (621)
.|. +.+ ++|+++|+|.+++ .+..+.+.-. ++ +++.|.+|++|++| +|+++.++++.+++
T Consensus 170 ~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 249 (365)
T 3get_A 170 LDASEATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANANIISAF 249 (365)
T ss_dssp CCHHHHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECHHHHHHH
T ss_pred cCHHHHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCHHHHHHH
Confidence 984 333 5699999999998 3333344322 23 78889999999666 79999999988765
Q ss_pred CCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcc
Q psy8733 349 LPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFY 417 (621)
Q Consensus 349 ~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~ 417 (621)
... ....++|....+++.++|+.. . .++.+.++.+++.+++++.|+++ |+.
T Consensus 250 ~~~--------------~~~~~~~~~~~~~~~~~l~~~--~-~~~~~~~~~~~~~~~l~~~l~~~-g~~ 300 (365)
T 3get_A 250 YKL--------------RAPFNVSNLALKAAVAAMDDD--E-FTEKTLENNFSQMELYKEFAKKH-NIK 300 (365)
T ss_dssp HHH--------------SCTTCSCHHHHHHHHHHHTCH--H-HHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred HHh--------------cCCCCcCHHHHHHHHHHhCCH--H-HHHHHHHHHHHHHHHHHHHHHhC-CCE
Confidence 321 012357778888888888742 2 57889999999999999999887 343
No 48
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.63 E-value=4.3e-14 Score=146.70 Aligned_cols=244 Identities=8% Similarity=-0.012 Sum_probs=159.4
Q ss_pred CceeccCC--CCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhh
Q psy8733 51 PVINFGAG--PAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMF 128 (621)
Q Consensus 51 ~~~lf~aG--Ps~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~ 128 (621)
.++.|+.| |.+.|++|++++.+.+.+.. +.. ...+.+.|+.++++++++.+ +|+|+ +|||+
T Consensus 17 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~----------~y~---~~~~~~l~~~la~~~~~~~~-~i~~~-~g~~~-- 79 (354)
T 3ly1_A 17 NPIRINFNENPLGMSPKAQAAARDAVVKAN----------RYA---KNEILMLGNKLAAHHQVEAP-SILLT-AGSSE-- 79 (354)
T ss_dssp SCEECSSCCCSSCCCHHHHHHHHHTGGGTT----------SCC---HHHHHHHHHHHHHHTTSCGG-GEEEE-SHHHH--
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHhhCc----------CCC---CCchHHHHHHHHHHhCCChH-HEEEe-CChHH--
Confidence 34445444 34588999999998874321 111 13567899999999998654 68886 67888
Q ss_pred hHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeeccccccccc
Q psy8733 129 AAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSI 208 (621)
Q Consensus 129 ~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~ 208 (621)
++++ ++..+..+||++.+..+++.+ +...++..|...+..+..
T Consensus 80 ---a~~~--------------------------~~~~l~~~gd~vl~~~~~~~~--~~~~~~~~g~~~~~~~~~------ 122 (354)
T 3ly1_A 80 ---GIRA--------------------------AIEAYASLEAQLVIPELTYGD--GEHFAKIAGMKVTKVKML------ 122 (354)
T ss_dssp ---HHHH--------------------------HHHHHCCTTCEEEEESSSCTH--HHHHHHHTTCEEEEECCC------
T ss_pred ---HHHH--------------------------HHHHHhCCCCeEEECCCCchH--HHHHHHHcCCEEEEecCC------
Confidence 3433 333344555555554444443 344566777643322210
Q ss_pred CCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCC--CCceEEEEecccccc
Q psy8733 209 PDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRD--PEASYLYYCDNETVD 286 (621)
Q Consensus 209 ~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~--~~t~~V~~thnET~t 286 (621)
+...++++++ +. .++ +++++|++++..|.+
T Consensus 123 --------------------------~~~~~d~~~l---------------------~~-~l~~~~~~~~v~l~~p~npt 154 (354)
T 3ly1_A 123 --------------------------DNWAFDIEGL---------------------KA-AVAAYSGPSIVYLVNPNNPT 154 (354)
T ss_dssp --------------------------TTSCCCHHHH---------------------HH-HHHTCSSCEEEEEESSCTTT
T ss_pred --------------------------CCCCCCHHHH---------------------HH-HhccCCCCCEEEEeCCCCCc
Confidence 0001122221 00 123 689999999999999
Q ss_pred cccccc-----ccc--cCCCcEEEecccccCCCc------cc-cccc-c--eEEeccccccCCCc--cEEEEEchhHHhh
Q psy8733 287 GVEFNY-----IPD--SQGIPLVSDMSSNFLSRK------FD-VSKF-G--VIIAGAQKNIGPAG--ITVVIVREDLLEY 347 (621)
Q Consensus 287 Gv~~p~-----i~~--~~g~llvvDavSs~G~~p------ID-v~~~-g--vl~asaqK~lGP~G--lg~livr~~ll~~ 347 (621)
|...|. +.+ ++|+++|+|.+++.+... +. ++.+ + +++.|.+|++|++| +|+++.++++.++
T Consensus 155 G~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~ 234 (354)
T 3ly1_A 155 GTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHPTVIAL 234 (354)
T ss_dssp CCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCHHHHHH
T ss_pred CCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCHHHHHH
Confidence 999884 333 489999999998854432 11 1233 3 88889999999666 7999999998876
Q ss_pred hCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 348 ALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 348 ~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
+... ....++|....+++.++|+.. . .++.+.++.+++.+++++.|+++
T Consensus 235 ~~~~--------------~~~~~~~~~~~~a~~~~l~~~--~-~~~~~~~~~~~~~~~l~~~l~~~ 283 (354)
T 3ly1_A 235 MGRY--------------VAGEKINFSGVDAALASMNDS--A-FITYSKKSNDVSRQILLKALEDL 283 (354)
T ss_dssp HGGG--------------TTCSCCCHHHHHHHHHHTTCH--H-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHh--------------cCCCCCCHHHHHHHHHHhcCH--H-HHHHHHHHHHHHHHHHHHHHHHC
Confidence 6421 112578888888888887743 2 57888999999999999999887
No 49
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.62 E-value=3e-14 Score=148.84 Aligned_cols=251 Identities=14% Similarity=0.153 Sum_probs=158.2
Q ss_pred CCceeccCCCC--CCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchh
Q psy8733 50 HPVINFGAGPA--KLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGM 127 (621)
Q Consensus 50 ~~~~lf~aGPs--~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~ 127 (621)
+..+.|+.|.. +.|++|++++.+.+.+....+ ..+ ..+.+.|+.+++++|+++..+|+|+ +|||+
T Consensus 30 ~~~i~l~~~~~~~~~~~~v~~a~~~~~~~~~~~~-----y~~------~~~~~l~~~la~~~g~~~~~~i~~~-~g~t~- 96 (367)
T 3euc_A 30 HGLVKLDAMENPYRLPPALRSELAARLGEVALNR-----YPV------PSSEALRAKLKEVMQVPAGMEVLLG-NGSDE- 96 (367)
T ss_dssp TTCEECCSSCCCCCCCHHHHHHHHHHHHHHHTTC-----SCC------CCHHHHHHHHHHHHTCCTTCEEEEE-EHHHH-
T ss_pred CCeeEccCCCCCCCCCHHHHHHHHHHhhhhhhhc-----CCC------CcHHHHHHHHHHHhCCCCcceEEEc-CCHHH-
Confidence 34555555543 478999999999886421111 111 1256889999999999544478886 56888
Q ss_pred hhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccc
Q psy8733 128 FAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVS 207 (621)
Q Consensus 128 ~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~ 207 (621)
+++++...+ +++||+|++. .+++.+ +...++..|...+..+..
T Consensus 97 ----a~~~~~~~~-~~~gd~Vl~~-------------------------~~~~~~--~~~~~~~~g~~~~~v~~~----- 139 (367)
T 3euc_A 97 ----IISMLALAA-ARPGAKVMAP-------------------------VPGFVM--YAMSAQFAGLEFVGVPLR----- 139 (367)
T ss_dssp ----HHHHHHHHT-CCTTCEEEEE-------------------------ESCSCC--SCHHHHTTTCEEEEEECC-----
T ss_pred ----HHHHHHHHH-cCCCCEEEEc-------------------------CCCHHH--HHHHHHHcCCeEEEecCC-----
Confidence 455443332 3445555444 333322 123345566543322210
Q ss_pred cCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCC-CceEEEEecccccc
Q psy8733 208 IPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDP-EASYLYYCDNETVD 286 (621)
Q Consensus 208 ~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~-~t~~V~~thnET~t 286 (621)
..| .+++|++ ++ .+++ ++++|++++..|.+
T Consensus 140 -------------------------~~~--~~d~~~l---------------------~~-~l~~~~~~~v~~~~~~npt 170 (367)
T 3euc_A 140 -------------------------ADF--TLDRGAM---------------------LA-AMAEHQPAIVYLAYPNNPT 170 (367)
T ss_dssp -------------------------TTS--CCCHHHH---------------------HH-HHHHHCCSEEEEESSCTTT
T ss_pred -------------------------CCC--CCCHHHH---------------------HH-HhhccCCCEEEEcCCCCCC
Confidence 000 0112221 00 1333 78999999999999
Q ss_pred cccccc--------ccccC--CCcEEEecccccCCC--cc-cccccc--eEEeccccccCCCc--cEEEEEchhHHhhhC
Q psy8733 287 GVEFNY--------IPDSQ--GIPLVSDMSSNFLSR--KF-DVSKFG--VIIAGAQKNIGPAG--ITVVIVREDLLEYAL 349 (621)
Q Consensus 287 Gv~~p~--------i~~~~--g~llvvDavSs~G~~--pI-Dv~~~g--vl~asaqK~lGP~G--lg~livr~~ll~~~~ 349 (621)
|+..+. +++++ |+++|+|.+++.... .+ .++.++ +++.|.+|+ |++| +|+++.++++.+++.
T Consensus 171 G~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~ 249 (367)
T 3euc_A 171 GNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQWLEQLD 249 (367)
T ss_dssp CCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEEEECCCT-TSCSCCEEEEEECHHHHHHHG
T ss_pred CCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEEecchhh-cccccCceeeeeCHHHHHHHH
Confidence 999763 35678 999999999774321 11 333444 778899999 7666 789999999887663
Q ss_pred CCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcc
Q psy8733 350 PITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFY 417 (621)
Q Consensus 350 ~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~ 417 (621)
.. ...+++|....+++.++|+. .. .++.+.++.+++.+++++.|++++|+.
T Consensus 250 ~~--------------~~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~l~~~~g~~ 300 (367)
T 3euc_A 250 KV--------------RPPYNVNVLTEATALFALEH--VA-VLDEQAAQLRAERSRVAEGMAAHGGVT 300 (367)
T ss_dssp GG--------------CCSSCCCHHHHHHHHHHHTT--HH-HHHHHHHHHHHHHHHHHHHHHTSTTCE
T ss_pred Hh--------------CCCCCCCHHHHHHHHHHhcC--HH-HHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence 21 11345777888888888876 22 478899999999999999999886554
No 50
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.61 E-value=1.3e-15 Score=165.99 Aligned_cols=266 Identities=12% Similarity=0.046 Sum_probs=165.3
Q ss_pred CCceeccCCCCCCCHHHHHHHHHHHH-hhccCCCcc-ccccc------ccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEc
Q psy8733 50 HPVINFGAGPAKLPREVLEEVKETLL-DYESTGISV-MEMSH------RSADYTKINNDTQAALRELLNVPNNYKILFLQ 121 (621)
Q Consensus 50 ~~~~lf~aGPs~~P~~Vlea~~~~l~-~~~~~g~sv-~e~sh------rs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~ 121 (621)
..+|++++|.+++|++|+++|..+.. .|. .+.+. .+..| .++.+.++.+++|+.+++++|++.+ ++|+
T Consensus 80 ~~~yld~aa~~~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~--~~~t- 155 (456)
T 2z67_A 80 TDKDPKSVRIGEREARTYSKIHEELSSGFC-HGIGRSGNLVDPQPKASGASIMYALTNKILESFFKQLGLNVH--AIAT- 155 (456)
T ss_dssp GGGCTTCEECSSCCCCCSCHHHHHHTTTCT-TCBSBTTBTTSCCTTBHHHHHHHHHHHHHHHHHHHHTTCCCE--EEEE-
T ss_pred ccccccccccccccccccccccCccccccC-CCccHHHHHHhhCcccccCcHHHHHHHHHHHHHHHHcCCCCC--EEEe-
Confidence 45899999999999999999887531 121 11110 01111 1335788999999999999999863 7776
Q ss_pred CCcchhhhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecc
Q psy8733 122 GGGTGMFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPK 201 (621)
Q Consensus 122 gggT~~~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~ 201 (621)
+|||+ +.|+++. .+ ..+.. +++.+.+... .|.. ..+.++..|...+..+.
T Consensus 156 ~g~te-----~a~~~al---------------------~~-~~~~~-~~~~vi~~~~-~h~s-~~~~~~~~G~~~~~v~~ 205 (456)
T 2z67_A 156 PISTG-----MSISLCL---------------------SA-ARKKY-GSNVVIYPYA-SHKS-PIKAVSFVGMNMRLVET 205 (456)
T ss_dssp SSCHH-----HHHHHHH---------------------HH-HHHHH-CCCEEEEECC-CCHH-HHHHHHHTTCEEEEECC
T ss_pred CcHHH-----HHHHHHH---------------------HH-HHHhc-CCCEEEEECC-CcHH-HHHHHHHcCCCceEEEE
Confidence 56886 2333220 00 01111 2232333333 2322 23455566764332221
Q ss_pred cccccccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCcccc-CC--CCCceEEE
Q psy8733 202 VSKYVSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTW-NR--DPEASYLY 278 (621)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l-~i--~~~t~~V~ 278 (621)
. + ++..| .+++|+++ +.+ .- .+++.+|.
T Consensus 206 ~----------~-----------------~~~~~--~~d~~~l~--------------------~~i~~~~~~~~~~~vv 236 (456)
T 2z67_A 206 V----------L-----------------DGDRV--YVPVEDIE--------------------NAIKKEIELGNRPCVL 236 (456)
T ss_dssp E----------E-----------------ETTEE--ECCHHHHH--------------------HHHHHHHHTTCCEEEE
T ss_pred e----------c-----------------cCCCC--CcCHHHHH--------------------HHHHHHhhCCCeEEEE
Confidence 0 0 00000 12222210 011 00 13677787
Q ss_pred Eecccccccccccc-----ccccCCCcEEEe---cccccCCCccccccc----ceEEecccccc-CCCccEEEEEc-hhH
Q psy8733 279 YCDNETVDGVEFNY-----IPDSQGIPLVSD---MSSNFLSRKFDVSKF----GVIIAGAQKNI-GPAGITVVIVR-EDL 344 (621)
Q Consensus 279 ~thnET~tGv~~p~-----i~~~~g~llvvD---avSs~G~~pIDv~~~----gvl~asaqK~l-GP~Glg~livr-~~l 344 (621)
.+...|.+|...|+ +++++|++++|| +.|++|..|++++.+ |++++|+||++ ||.|+|+++++ +++
T Consensus 237 ~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~D~~~~s~hK~~~~p~g~G~l~~~~~~~ 316 (456)
T 2z67_A 237 STLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRVDAVVSSSDKNLLTPIGGGLVYSTDAEF 316 (456)
T ss_dssp EESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCCSEEEEEHHHHHCCCSSCEEEEESCHHH
T ss_pred EeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCCCEEEEcCCCCcCCCCCeEEEEEcCHHH
Confidence 88888899999996 456789999999 667777777776543 59999999997 59999999995 677
Q ss_pred HhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 345 LEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 345 l~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
++++.+ .|. +....+| +.++.+++..+.+. |++++.++..++++++++.|.+++
T Consensus 317 ~~~l~~---~~~--------g~~~~~~----~~~~~aal~~l~~~-~~~~~~~~~~~~~~~l~~~L~~~~ 370 (456)
T 2z67_A 317 IKEISL---SYP--------GRASATP----VVNTLVSLLSMGSK-NYLELVKNQKNSKKLLDELLNDLS 370 (456)
T ss_dssp HHHHHT---TSC--------SCBCSHH----HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcCc---CCC--------CCCCCCH----HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 776632 221 1112222 55666778888777 899999999999999999999884
No 51
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.61 E-value=9.9e-14 Score=144.92 Aligned_cols=246 Identities=14% Similarity=0.120 Sum_probs=154.6
Q ss_pred ceeccCC--CCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhh
Q psy8733 52 VINFGAG--PAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFA 129 (621)
Q Consensus 52 ~~lf~aG--Ps~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~ 129 (621)
++.|+.| |.+.|++|++++.+.+.+. +.+.....+. ...+.|+.+++++|++.+ +|+|+ +|||+
T Consensus 28 ~i~l~~~~~~~~~~~~v~~a~~~~~~~~---~~~~~~y~~~------~~~~lr~~la~~~g~~~~-~i~~t-~g~~~--- 93 (360)
T 3hdo_A 28 WIKLNTNENPYPPSPEVVKAILEELGPD---GAALRIYPSA------SSQKLREVAGELYGFDPS-WIIMA-NGSDE--- 93 (360)
T ss_dssp SEECSSCCCSSCCCHHHHHHHHHHHTTT---CGGGGSCCCS------SCHHHHHHHHHHHTCCGG-GEEEE-SSHHH---
T ss_pred eeeccCCCCCCCCCHHHHHHHHHHHhcc---cchhhcCCCC------chHHHHHHHHHHhCcCcc-eEEEc-CCHHH---
Confidence 3444433 3467899999999987542 0001101111 135789999999998554 68886 67888
Q ss_pred HHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccC
Q psy8733 130 AVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIP 209 (621)
Q Consensus 130 a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~ 209 (621)
+++++ +..++.+||++.+..+++.+ +...++..|...+..+..
T Consensus 94 --al~~~--------------------------~~~l~~~gd~Vl~~~p~~~~--~~~~~~~~g~~~~~v~~~------- 136 (360)
T 3hdo_A 94 --VLNNL--------------------------IRAFAAEGEEIGYVHPSYSY--YGTLAEVQGARVRTFGLT------- 136 (360)
T ss_dssp --HHHHH--------------------------HHHHCCTTCEEEEESSSCTH--HHHHHHHHTCEEEEECBC-------
T ss_pred --HHHHH--------------------------HHHHhCCCCEEEEcCCChHH--HHHHHHHCCCEEEEeeCC-------
Confidence 44443 33334455555444444333 334566777643322210
Q ss_pred CCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccccc
Q psy8733 210 DQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVE 289 (621)
Q Consensus 210 ~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~ 289 (621)
.+ ..+ +.+....++++|.+++..|.+|..
T Consensus 137 -----------------------------------------------~~-~~~---~~l~~~~~~~~v~i~~p~nptG~~ 165 (360)
T 3hdo_A 137 -----------------------------------------------GD-FRI---AGFPERYEGKVFFLTTPNAPLGPS 165 (360)
T ss_dssp -----------------------------------------------TT-SSB---TTCCSSBCSSEEEEESSCTTTCCC
T ss_pred -----------------------------------------------CC-CCH---HHHHhhcCCCEEEEeCCCCCCCCC
Confidence 00 011 111111235699999999999999
Q ss_pred ccc-----ccccCCCcEEEecccccC--CCcccc-cccc--eEEeccccccCCCc--cEEEEEchhHHhhhCCCCCceee
Q psy8733 290 FNY-----IPDSQGIPLVSDMSSNFL--SRKFDV-SKFG--VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFH 357 (621)
Q Consensus 290 ~p~-----i~~~~g~llvvDavSs~G--~~pIDv-~~~g--vl~asaqK~lGP~G--lg~livr~~ll~~~~~~~P~~ld 357 (621)
.|. +++.+|+++|+|.+++.. ...+++ +.++ +++.|.+|++|++| +|+++.++++.+++....
T Consensus 166 ~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~----- 240 (360)
T 3hdo_A 166 FPLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSYSLAGMRIGLAIARPEVIAALDKIR----- 240 (360)
T ss_dssp CCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTTSCTTSCCEEEECCHHHHHHHHHHS-----
T ss_pred cCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhhcCCccceeeEeeCHHHHHHHHHhC-----
Confidence 985 456789999999998842 222332 2233 77889999998766 699999998887653210
Q ss_pred ccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcc
Q psy8733 358 FKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFY 417 (621)
Q Consensus 358 ~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~ 417 (621)
...++|....+++.++|+. .. .++.+.++.+++.+++++.|+++ |+.
T Consensus 241 ---------~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~L~~~-~~~ 287 (360)
T 3hdo_A 241 ---------DHYNLDRLAQAACVAALRD--QA-YLSECCRRIRETREWFTTELRSI-GYD 287 (360)
T ss_dssp ---------CSCCSCHHHHHHHHHHHHC--HH-HHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred ---------CCCCCCHHHHHHHHHHhcC--HH-HHHHHHHHHHHHHHHHHHHHHHC-CCE
Confidence 1245777788888888774 22 47888999999999999999887 343
No 52
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.61 E-value=1.2e-13 Score=152.54 Aligned_cols=146 Identities=14% Similarity=0.059 Sum_probs=110.6
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCCCcEEEecccccCC-----------Ccccccccc--eEEecccccc-
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLS-----------RKFDVSKFG--VIIAGAQKNI- 330 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~-----------~pIDv~~~g--vl~asaqK~l- 330 (621)
+++++++|.+++..|.+|...|+ +++++|+++|+|.+.+.+. .+++....+ +++++.||++
T Consensus 236 i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~ 315 (514)
T 3mad_A 236 ITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGY 315 (514)
T ss_dssp CCTTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTC
T ss_pred hccCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchhccC
Confidence 55689999999999999999886 4568899999999866442 256655554 8999999996
Q ss_pred CCCccEEEEEchhHHhhhCCCCCceeeccc-cccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Q psy8733 331 GPAGITVVIVREDLLEYALPITPTVFHFKI-NADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQE 409 (621)
Q Consensus 331 GP~Glg~livr~~ll~~~~~~~P~~ld~~~-~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~ 409 (621)
||.|+|+++++++.+.+..... ..+|.. ........+|++...+.++.++++.+... |++++.++..++++++++.
T Consensus 316 ~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~-~~~~~~~~~~~~~~~l~~~ 392 (514)
T 3mad_A 316 GAKGTSVILYRRPDLLHYQYFI--AADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEE-GYLDATRRILQAADRLKAG 392 (514)
T ss_dssp CCSSCEEEEESSHHHHTTTCEE--ESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEEeCHHHhcccccc--ccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHH
Confidence 6999999999998875432110 001111 01112345688888889999999999887 8999999999999999999
Q ss_pred HHccCCccc
Q psy8733 410 IDNSDKFYE 418 (621)
Q Consensus 410 L~~~~g~~~ 418 (621)
|++++|+..
T Consensus 393 L~~~~g~~~ 401 (514)
T 3mad_A 393 VRAIPSLKI 401 (514)
T ss_dssp HHTSTTCEE
T ss_pred HhhCCCeEE
Confidence 998876643
No 53
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.60 E-value=5.2e-14 Score=154.70 Aligned_cols=144 Identities=10% Similarity=-0.038 Sum_probs=102.5
Q ss_pred ceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCccc--------ccccceEEeccccccC-CCccEEEE
Q psy8733 274 ASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFD--------VSKFGVIIAGAQKNIG-PAGITVVI 339 (621)
Q Consensus 274 t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pID--------v~~~gvl~asaqK~lG-P~Glg~li 339 (621)
+.+|..++.+|.+|...|+ +++++|++++||++++.+....+ ++..|.+.+++|||++ |.|.|+++
T Consensus 242 ~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g~g~l~ 321 (481)
T 4e1o_A 242 PVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFDCTGFW 321 (481)
T ss_dssp EEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred cEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCceEEEE
Confidence 6789999999999999886 45689999999999887643221 1223789999999996 99999999
Q ss_pred EchhHH-hhhCCCCCceeeccccc-----cCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 340 VREDLL-EYALPITPTVFHFKINA-----DNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 340 vr~~ll-~~~~~~~P~~ld~~~~~-----~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
++++.+ .+.....+.|+...... .......+-+ +.+..+..+++.+..+ |++++.++..++++++++.|.++
T Consensus 322 ~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~al~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~ 399 (481)
T 4e1o_A 322 VKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRR-FRSVKLWFVIRSFGVK-NLQAHVRHGTEMAKYFESLVRND 399 (481)
T ss_dssp ESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCC-CTHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCC-ccHHHHHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHhcC
Confidence 998764 33323334443211100 0001111211 3456677788888777 89999999999999999999999
Q ss_pred CCcccC
Q psy8733 414 DKFYEC 419 (621)
Q Consensus 414 ~g~~~~ 419 (621)
+||.+.
T Consensus 400 ~g~~~~ 405 (481)
T 4e1o_A 400 PSFEIP 405 (481)
T ss_dssp TTEECC
T ss_pred CCeEEe
Confidence 888764
No 54
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.60 E-value=9.9e-14 Score=149.21 Aligned_cols=247 Identities=12% Similarity=0.126 Sum_probs=158.6
Q ss_pred CCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhC-----CCCCCEEEEEcCCcchhhhHHHHH
Q psy8733 60 AKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLN-----VPNNYKILFLQGGGTGMFAAVAMN 134 (621)
Q Consensus 60 s~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~-----~p~~yeI~f~~gggT~~~~a~alN 134 (621)
.+.|++|++++.+.+.+....+.+ . ..-+.+.|+.++++++ +..+ +|+|+ +|||+ |++
T Consensus 70 ~~~~~~v~~a~~~~~~~~~~~~y~-----~-----~~g~~~lr~~la~~~~~~~~~~~~~-~v~~t-~g~t~-----al~ 132 (427)
T 3dyd_A 70 LPTDPEVTQAMKDALDSGKYNGYA-----P-----SIGFLSSREEIASYYHCPEAPLEAK-DVILT-SGCSQ-----AID 132 (427)
T ss_dssp SCCCHHHHHHHHHHHHHCCSSSCC-----C-----TTCCHHHHHHHHHHHCBTTBCCCGG-GEEEE-SSHHH-----HHH
T ss_pred CCCCHHHHHHHHHHHhcCcCCCCC-----C-----CCCcHHHHHHHHHHHhhcCCCCChH-HEEEe-cCcHH-----HHH
Confidence 378999999999988652211110 0 1235678899999998 5443 68776 67888 333
Q ss_pred HhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCCCCCC
Q psy8733 135 LISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTW 214 (621)
Q Consensus 135 lla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~ 214 (621)
+ ++..+..+|+++.+..+++.+. ...++..|...+..+..
T Consensus 133 ~--------------------------~~~~l~~~gd~vl~~~p~~~~~--~~~~~~~g~~~~~~~~~------------ 172 (427)
T 3dyd_A 133 L--------------------------CLAVLANPGQNILVPRPGFSLY--KTLAESMGIEVKLYNLL------------ 172 (427)
T ss_dssp H--------------------------HHHHHCCTTCEEEEEESCCTHH--HHHHHHTTCEEEEEEEE------------
T ss_pred H--------------------------HHHHhcCCCCEEEEcCCCchhH--HHHHHHcCCEEEEEecc------------
Confidence 3 3334455666666666655543 44566777643322110
Q ss_pred CCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccccccc---
Q psy8733 215 NRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEFN--- 291 (621)
Q Consensus 215 ~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~~p--- 291 (621)
+ ...|+ ++.+++ + -.+++++++|.+++..|.||+..+
T Consensus 173 ------------~----~~~~~--~d~~~l---------------------~-~~l~~~~~~v~i~~p~nptG~~~~~~~ 212 (427)
T 3dyd_A 173 ------------P----EKSWE--IDLKQL---------------------E-YLIDEKTACLIVNNPSNPCGSVFSKRH 212 (427)
T ss_dssp ------------G----GGTTE--ECHHHH---------------------H-SSCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred ------------c----ccCCC--CCHHHH---------------------H-HHhccCCCEEEEECCCCCCCCCCCHHH
Confidence 0 00011 122221 0 124567899999999999999988
Q ss_pred c-----ccccCCCcEEEecccccC----CCcccccccc-----eEEeccccccCCCc--cEEEEEch-------hHHhhh
Q psy8733 292 Y-----IPDSQGIPLVSDMSSNFL----SRKFDVSKFG-----VIIAGAQKNIGPAG--ITVVIVRE-------DLLEYA 348 (621)
Q Consensus 292 ~-----i~~~~g~llvvDavSs~G----~~pIDv~~~g-----vl~asaqK~lGP~G--lg~livr~-------~ll~~~ 348 (621)
+ +++++|+++|+|.+++.+ ....++..++ +++.|.+|++|.+| +|++++++ ++.+.+
T Consensus 213 l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l 292 (427)
T 3dyd_A 213 LQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGL 292 (427)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHH
Confidence 3 356899999999999863 3333444432 66779999998888 79999884 343332
Q ss_pred CCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcc
Q psy8733 349 LPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFY 417 (621)
Q Consensus 349 ~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~ 417 (621)
.. + .....+||.....++.++|+...+. .++.+.++.+++.+++++.|++++|+.
T Consensus 293 ~~-------~------~~~~~~~~~~~~~a~~~~L~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~g~~ 347 (427)
T 3dyd_A 293 VK-------L------SQRILGPCTIVQGALKSILCRTPGE-FYHNTLSFLKSNADLCYGALAAIPGLR 347 (427)
T ss_dssp HH-------H------HHHHCCSCHHHHHHHHHHHHHSCHH-HHHHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred HH-------H------HhccCCCCHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 11 0 1124577888888888888754333 578888999999999999999886553
No 55
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.60 E-value=3.8e-14 Score=151.55 Aligned_cols=147 Identities=8% Similarity=0.046 Sum_probs=102.8
Q ss_pred CCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCC----Ccc--------cccc-cc--eEEeccc
Q psy8733 271 DPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLS----RKF--------DVSK-FG--VIIAGAQ 327 (621)
Q Consensus 271 ~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~----~pI--------Dv~~-~g--vl~asaq 327 (621)
++++++|.+++..|.||+..+. +++++|+++|+|.+++.+. .++ ++.+ .+ +++.|.+
T Consensus 180 ~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 259 (437)
T 3g0t_A 180 TGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILALSSS 259 (437)
T ss_dssp TTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEEEST
T ss_pred cCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEEcCc
Confidence 5678999999999999999873 3467999999999998633 232 4443 44 7888999
Q ss_pred cccCCCc--cEEEEEchhHHh-hhCCCCCceee----cc-ccccCCCccCCchHHHHHHHHHHHHHHHhh-CCHHHHHHH
Q psy8733 328 KNIGPAG--ITVVIVREDLLE-YALPITPTVFH----FK-INADNNSVYNTPPTFVVHVIQRVFAWIKRQ-GGLAKMEQN 398 (621)
Q Consensus 328 K~lGP~G--lg~livr~~ll~-~~~~~~P~~ld----~~-~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~-gGl~~i~~r 398 (621)
|++|++| +|+++.++++++ ......+.+.. +. ..........+++....+++.++|+...+. ..++++.++
T Consensus 260 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 339 (437)
T 3g0t_A 260 KAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEYNFRDSVIE 339 (437)
T ss_dssp TTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSCCHHHHHHH
T ss_pred cCCCCccceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHHHHHHHHHH
Confidence 9999887 899999999887 52111111000 00 000011234677888888888888876431 128999999
Q ss_pred HHHHHHHHHHHHHccCCccc
Q psy8733 399 SLQKSVLLYQEIDNSDKFYE 418 (621)
Q Consensus 399 ~~~la~~L~e~L~~~~g~~~ 418 (621)
.+++.+++++.|+++ |+..
T Consensus 340 ~~~~~~~l~~~L~~~-g~~~ 358 (437)
T 3g0t_A 340 YGRKARIMKKMFLDN-GFNI 358 (437)
T ss_dssp HHHHHHHHHHHHHTT-TEEE
T ss_pred HHHHHHHHHHHHHHc-CCEE
Confidence 999999999999987 4543
No 56
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.59 E-value=2.4e-13 Score=143.77 Aligned_cols=253 Identities=9% Similarity=0.044 Sum_probs=153.3
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHHH
Q psy8733 53 INFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAVA 132 (621)
Q Consensus 53 ~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~a 132 (621)
..+..+|..+|++|++++.+.+.+.. |.. ...+++.|+.++++++++ +++|+ ++||+ |
T Consensus 4 ~~~~~~~~~~~~~~~~a~~~~~~~~~----------~~~---~~~~~~l~~~la~~~~~~---~~i~~-~sGt~-----a 61 (390)
T 3b8x_A 4 INYPLASSTWDDLEYKAIQSVLDSKM----------FTM---GEYVKQYETQFAKTFGSK---YAVMV-SSGST-----A 61 (390)
T ss_dssp -CBCSCCCCCCHHHHHHHHHHHHHTC----------CSS---CHHHHHHHHHHHHHHTCS---EEEEE-SCHHH-----H
T ss_pred eeccCCCCCCCHHHHHHHHHHHHcCC----------CCC---ChHHHHHHHHHHHHHCCC---cEEEE-CCHHH-----H
Confidence 34567899999999999999875421 111 246788999999999986 46766 67888 5
Q ss_pred HHHhhhcc------CCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeeccccccc
Q psy8733 133 MNLISSSM------NVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYV 206 (621)
Q Consensus 133 lNlla~~~------~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~ 206 (621)
++++...+ ++++||+|++... .| .+. ...++..|...+..+..
T Consensus 62 ~~~al~~~~~~~~~~~~~g~~Vi~~~~----~~---------------------~~~--~~~~~~~g~~~~~~~~~---- 110 (390)
T 3b8x_A 62 NLLMIAALFFTKKPRLKKGDEIIVPAV----SW---------------------STT--YYPLQQYGLRVKFVDID---- 110 (390)
T ss_dssp HHHHHHHTTSSSSCSCCTTCEEEEESS----SC---------------------HHH--HHHHHHTTCEEEEECBC----
T ss_pred HHHHHHHHHhhhhcCCCCcCEEEECCC----Cc---------------------HHH--HHHHHHcCCEEEEEecC----
Confidence 55544444 4667777776653 22 211 11234456533222210
Q ss_pred ccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccc
Q psy8733 207 SIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVD 286 (621)
Q Consensus 207 ~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~t 286 (621)
+ ..|. ++++++ + -.+++++++|.++| .+
T Consensus 111 ------~-------------------~~~~--~d~~~l---------------------~-~~i~~~~~~v~~~~---~~ 138 (390)
T 3b8x_A 111 ------I-------------------NTLN--IDIESL---------------------K-EAVTDSTKAILTVN---LL 138 (390)
T ss_dssp ------T-------------------TTCS--BCHHHH---------------------H-HHCCTTEEEEEEEC---GG
T ss_pred ------c-------------------cccC--cCHHHH---------------------H-HHhCcCCeEEEEEC---Cc
Confidence 0 0000 111121 1 12456799999985 46
Q ss_pred cccccc-----ccccCCCcEEEecccccCCCcccccccc----eEE---eccccccCCCccEEEEEch-hHHhhhCCCCC
Q psy8733 287 GVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG----VII---AGAQKNIGPAGITVVIVRE-DLLEYALPITP 353 (621)
Q Consensus 287 Gv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g----vl~---asaqK~lGP~Glg~livr~-~ll~~~~~~~P 353 (621)
|...|+ +++++|+++|+|++|++|..+ +...+| +.. +++||..++.| |+++.++ ++.+++.+...
T Consensus 139 g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~g~~~~~~~~s~~~~k~~~~g~g-G~~~~~~~~l~~~~~~~~~ 216 (390)
T 3b8x_A 139 GNPNNFDEINKIIGGRDIILLEDNCESMGATF-NNKCAGTFGLMGTFSSFYSNHIATMEG-GCIVTDDEEIYHILLCIRA 216 (390)
T ss_dssp GCCCCHHHHHHHHTTSCCEEEEECTTCTTCEE-TTEETTSSSSEEEEECCTTSSSCSSSC-EEEEESCHHHHHHHHHHTB
T ss_pred cChhhHHHHHHHHHHcCCEEEEECcCcccCEE-CCcccccccceEEEEccCCCCCccCCc-eEEEeCCHHHHHHHHHHHh
Confidence 877775 457899999999999999876 665554 222 34555435677 9999886 55444332111
Q ss_pred -ce-ee---------------ccc---cccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 354 -TV-FH---------------FKI---NADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 354 -~~-ld---------------~~~---~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
.+ .+ +.. ....+..+.|+++.+++++.. +++ ++.+.++.+++++++++.|.++
T Consensus 217 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~-l~~------l~~~~~~~~~~~~~l~~~L~~~ 289 (390)
T 3b8x_A 217 HGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQ-LKK------LPRFISVRRKNAEYFLDKFKDH 289 (390)
T ss_dssp TTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHH-HHH------HHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHH-HHH------HHHHHHHHHHHHHHHHHHhcCC
Confidence 00 00 000 001123345899988888775 554 4566788888999999999988
Q ss_pred CCcccC
Q psy8733 414 DKFYEC 419 (621)
Q Consensus 414 ~g~~~~ 419 (621)
+|+.+.
T Consensus 290 ~~~~~~ 295 (390)
T 3b8x_A 290 PYLDVQ 295 (390)
T ss_dssp SSEEEC
T ss_pred CCcccC
Confidence 776544
No 57
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.59 E-value=9e-14 Score=145.36 Aligned_cols=254 Identities=13% Similarity=0.105 Sum_probs=148.4
Q ss_pred CceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhH
Q psy8733 51 PVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAA 130 (621)
Q Consensus 51 ~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a 130 (621)
.++.++.|...+++ +.+++.+.+..... .. .....+.|+.++++++.+ +++|+ +|||+
T Consensus 7 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~--------~~-----~~~~~~l~~~la~~~~~~---~~~~~-~~gt~---- 64 (374)
T 3uwc_A 7 PYSYLERQFADIEP-YLNDLREFIKTADF--------TL-----GAELEKFEKRFAALHNAP---HAIGV-GTGTD---- 64 (374)
T ss_dssp CSCCHHHHTSSCHH-HHHHHHHHHHHTCC--------SS-----CHHHHHHHHHHHHHTTCS---EEEEE-SCHHH----
T ss_pred eeeccccCCCCchH-HHHHHHHHHHcCCc--------cc-----ChhHHHHHHHHHHHhCCC---cEEEe-CCHHH----
Confidence 35667777777777 99998887643210 11 246778999999999986 57776 66888
Q ss_pred HHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCC
Q psy8733 131 VAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPD 210 (621)
Q Consensus 131 ~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~ 210 (621)
|++++...+++++||+|++.. .++.+. ...++..|...+..+.
T Consensus 65 -a~~~~~~~~~~~~gd~v~~~~-------------------------~~~~~~--~~~~~~~g~~~~~~~~--------- 107 (374)
T 3uwc_A 65 -ALAMSFKMLNIGAGDEVITCA-------------------------NTFIAS--VGAIVQAGATPVLVDS--------- 107 (374)
T ss_dssp -HHHHHHHHTTCCTTCEEEEES-------------------------SSCHHH--HHHHHHTTCEEEEECB---------
T ss_pred -HHHHHHHHcCCCCCCEEEECC-------------------------CccHHH--HHHHHHcCCEEEEEec---------
Confidence 454444444455555555543 333332 2345566654322211
Q ss_pred CCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccccc
Q psy8733 211 QSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEF 290 (621)
Q Consensus 211 ~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~~ 290 (621)
+..|. +++++ .+ -.+++++++|. .+ +.+|...
T Consensus 108 ---------------------~~~~~--~d~~~---------------------l~-~~~~~~~~~v~-~~--n~~G~~~ 139 (374)
T 3uwc_A 108 ---------------------ENGYV--IDPEK---------------------IE-AAITDKTKAIM-PV--HYTGNIA 139 (374)
T ss_dssp ---------------------CTTSS--BCGGG---------------------TG-GGCCTTEEEEC-CB--CGGGCCC
T ss_pred ---------------------CCCCC--cCHHH---------------------HH-HhCCCCceEEE-Ee--CCcCCcC
Confidence 00000 11111 11 12456788877 33 4679988
Q ss_pred cc-----ccccCCCcEEEecccccCCCccccccc----ceEEeccc--cccCCCc-cEEEEEch-hHHhhhCCCCCceee
Q psy8733 291 NY-----IPDSQGIPLVSDMSSNFLSRKFDVSKF----GVIIAGAQ--KNIGPAG-ITVVIVRE-DLLEYALPITPTVFH 357 (621)
Q Consensus 291 p~-----i~~~~g~llvvDavSs~G~~pIDv~~~----gvl~asaq--K~lGP~G-lg~livr~-~ll~~~~~~~P~~ld 357 (621)
|+ +++++|+++|+|.+++.|.. ++...+ |+++.|.| |++|++| .|+++.++ ++.+++.+.......
T Consensus 140 ~~~~i~~~~~~~~~~li~D~~~~~g~~-~~~~~~~~~~d~~~~s~~~~K~l~~~g~~g~~~~~~~~~~~~~~~~~~~~~~ 218 (374)
T 3uwc_A 140 DMPALAKIAKKHNLHIVEDACQTILGR-INDKFVGSWGQFACFSLHPLKNLNVWSDAGVIITHSDEYAEKLRLYRNHGLI 218 (374)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTCTTCE-ETTEETTSSSSEEEEECSSSSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEE
T ss_pred CHHHHHHHHHHcCCEEEEeCCCccCce-eCCeeccccccEEEEeCCCCCcCCccceeEEEEeCCHHHHHHHHHHHhcCcc
Confidence 85 45689999999999998875 444433 38888866 9998755 55566554 455544321110000
Q ss_pred ccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCC-ccc
Q psy8733 358 FKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDK-FYE 418 (621)
Q Consensus 358 ~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g-~~~ 418 (621)
..... ... +.+. .+..+.+++.+.... +++.+.++.+++++++++.|.++++ +..
T Consensus 219 -~~~~~--~~~-~~~~-~~~~~~aa~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 274 (374)
T 3uwc_A 219 -NRDVC--VEY-GINC-RMDTIQAVIANRLMN-QLETITEKRRGIAHLYDQSFVDLSEFIDV 274 (374)
T ss_dssp -ETTEE--SSC-CCBC-BCCHHHHHHHHHHGG-GHHHHHHHHHHHHHHHHHHTGGGTTTEEC
T ss_pred -ccCcc--ccc-cccC-CCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCeEEe
Confidence 00000 000 1111 223445556665555 7899999999999999999998876 543
No 58
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.59 E-value=1.3e-13 Score=151.81 Aligned_cols=140 Identities=14% Similarity=0.084 Sum_probs=99.9
Q ss_pred CceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCc-----cccc---ccceEEeccccccC-CCccEEE
Q psy8733 273 EASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRK-----FDVS---KFGVIIAGAQKNIG-PAGITVV 338 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~p-----IDv~---~~gvl~asaqK~lG-P~Glg~l 338 (621)
++++|.+++..|.+|...|+ +++++|++++||++++.+..+ .+++ ..|++++++|||+| |.|+|++
T Consensus 245 ~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~~g~l 324 (504)
T 2okj_A 245 VPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAI 324 (504)
T ss_dssp EEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEE
T ss_pred CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcccCCEEEECchhhcCCCcceEEE
Confidence 58999999999999999886 456889999999999888754 3443 44699999999997 9999999
Q ss_pred EEchh-HHhhhCCCCCceee-----------cccc-ccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q psy8733 339 IVRED-LLEYALPITPTVFH-----------FKIN-ADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVL 405 (621)
Q Consensus 339 ivr~~-ll~~~~~~~P~~ld-----------~~~~-~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~ 405 (621)
+++++ ++++.....+.|+. +... .+...++++. .++ .+++.+... |++++.++..+++++
T Consensus 325 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l---~~~---a~l~~lg~~-g~~~~~~~~~~~a~~ 397 (504)
T 2okj_A 325 LVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIF---KFW---LMWKAKGTV-GFENQINKCLELAEY 397 (504)
T ss_dssp EESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHH---HHH---HHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred EEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHH---HHH---HHHHHhhHH-HHHHHHHHHHHHHHH
Confidence 99974 66543222333321 1110 0112223322 222 335555566 799999999999999
Q ss_pred HHHHHHccCCcccC
Q psy8733 406 LYQEIDNSDKFYEC 419 (621)
Q Consensus 406 L~e~L~~~~g~~~~ 419 (621)
+++.|.+++|+.+.
T Consensus 398 l~~~L~~~~~~~~~ 411 (504)
T 2okj_A 398 LYAKIKNREEFEMV 411 (504)
T ss_dssp HHHHHTTCTTEEES
T ss_pred HHHHHhcCCCEEEE
Confidence 99999998877654
No 59
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.59 E-value=6.3e-15 Score=154.75 Aligned_cols=249 Identities=14% Similarity=0.120 Sum_probs=148.4
Q ss_pred ceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHH
Q psy8733 52 VINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAV 131 (621)
Q Consensus 52 ~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~ 131 (621)
.++++.++.++++++++++.+.+..... . ....+++.|+.++++++.+ +++|+ +|||+
T Consensus 5 ~~~l~~~~~~~~~~~~~a~~~~~~~~~~--------~-----~~~~~~~l~~~la~~~~~~---~~i~~-~sgt~----- 62 (373)
T 3frk_A 5 FASFKPMHDEIEYEIKFKFEEIYKRNWF--------I-----LGDEDKKFEQEFADYCNVN---YCIGC-GNGLD----- 62 (373)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHHTCC--------S-----SSHHHHHHHHHHHHHHTSS---EEEEE-SCHHH-----
T ss_pred ccCCCcccCCCCHHHHHHHHHHHHCCCc--------c-----CCchHHHHHHHHHHHhCCC---eEEEe-CCHHH-----
Confidence 3455666667788999999888743210 1 1256889999999999985 57877 67898
Q ss_pred HHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCCC
Q psy8733 132 AMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQ 211 (621)
Q Consensus 132 alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~ 211 (621)
|++++...+++++||+|++... ++.+- ...++..|...+..+..
T Consensus 63 al~~~l~~l~~~~gd~Vi~~~~-------------------------~~~~~--~~~~~~~g~~~~~~~~~--------- 106 (373)
T 3frk_A 63 ALHLILKGYDIGFGDEVIVPSN-------------------------TFIAT--ALAVSYTGAKPIFVEPD--------- 106 (373)
T ss_dssp HHHHHHHHTTCCTTCEEEEETT-------------------------SCTHH--HHHHHHHSCEEEEECEE---------
T ss_pred HHHHHHHHcCCCCcCEEEECCC-------------------------CcHHH--HHHHHHcCCEEEEEecc---------
Confidence 5666555556677777776643 22221 22345566543322210
Q ss_pred CCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccccccccc
Q psy8733 212 STWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEFN 291 (621)
Q Consensus 212 ~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~~p 291 (621)
+ ..|. +++++ .+ -.+++++++|..+ +.+|...|
T Consensus 107 -~-------------------~~~~--~d~~~---------------------l~-~~l~~~~~~v~~~---n~~G~~~~ 139 (373)
T 3frk_A 107 -I-------------------RTYN--IDPSL---------------------IE-SAITEKTKAIIAV---HLYGQPAD 139 (373)
T ss_dssp -T-------------------TTTE--ECGGG---------------------TG-GGCCTTEEEEEEE---CCTTCCCC
T ss_pred -c-------------------cccC--cCHHH---------------------HH-HhcCCCCeEEEEE---CCCcCccc
Confidence 0 0000 11111 11 1355688888833 36799888
Q ss_pred c-----ccccCCCcEEEecccccCCCcccccccc----eEEec--cccccCCCc-cEEEEEch-hHHhhhCCCCC--cee
Q psy8733 292 Y-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG----VIIAG--AQKNIGPAG-ITVVIVRE-DLLEYALPITP--TVF 356 (621)
Q Consensus 292 ~-----i~~~~g~llvvDavSs~G~~pIDv~~~g----vl~as--aqK~lGP~G-lg~livr~-~ll~~~~~~~P--~~l 356 (621)
+ +++++|+++|+|+++++|.. ++.+.++ ++++| +||++|++| .|+++.++ ++.+++.+... ...
T Consensus 140 l~~i~~l~~~~~~~li~D~a~~~g~~-~~~~~~~~~~d~~~~S~~~~K~l~~~g~gg~~~~~~~~~~~~~~~~~~~g~~~ 218 (373)
T 3frk_A 140 MDEIKRIAKKYNLKLIEDAAQAHGSL-YKGMKVGSLGDAAGFSFYPAKNLGSLGDGGAVVTNDKDLAEKIKALSNYGSEK 218 (373)
T ss_dssp HHHHHHHHHHHTCEEEEECTTCTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSSCEEEEESCHHHHHHHHHHHBTTCSB
T ss_pred HHHHHHHHHHcCCEEEEECCcccCCE-ECCEeccccccEEEEeCcCCCccCccceeEEEEeCCHHHHHHHHHHHhcCccc
Confidence 5 45678999999999999887 6655543 66666 889998754 45555554 45554432110 000
Q ss_pred eccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 357 HFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 357 d~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
.+.. ...+..+ .+..+.+++...... +++.+.++.+++++++++.|.+++
T Consensus 219 ~~~~-~~~g~~~------~~~~~~aa~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~ 268 (373)
T 3frk_A 219 KYHH-IYKGFNS------RLDELQAGFLRVKLK-YLDKWNEERRKIAQKYIAGINNPN 268 (373)
T ss_dssp TTBC-CSCCCBC------CCCHHHHHHHHHHHH-THHHHHHHHHHHHHHHHHHCCCTT
T ss_pred CCcc-ccccccC------CCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhccCc
Confidence 0000 0001111 123344555555444 788999999999999999998876
No 60
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.59 E-value=3.5e-13 Score=141.79 Aligned_cols=135 Identities=11% Similarity=0.170 Sum_probs=99.5
Q ss_pred CCCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC----cccccc----c--ceEEeccccccC
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR----KFDVSK----F--GVIIAGAQKNIG 331 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~----pIDv~~----~--gvl~asaqK~lG 331 (621)
+++++++|.+++.+|.||...+. +++++|+++|+|.+++.+.. +.++.. . ++++.|.+|++|
T Consensus 157 l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 236 (389)
T 1gd9_A 157 VTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSKTFA 236 (389)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTTTTT
T ss_pred cCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChhhcC
Confidence 44578999999999999998862 34679999999999987754 233332 2 388999999999
Q ss_pred CCc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Q psy8733 332 PAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQE 409 (621)
Q Consensus 332 P~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~ 409 (621)
++| +|++++++++++++.+. ......+++....+++.++|+...+..+++.+.++.+++.+++++.
T Consensus 237 ~~G~r~G~~~~~~~~~~~l~~~------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (389)
T 1gd9_A 237 MTGWRLGFVAAPSWIIERMVKF------------QMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKR 304 (389)
T ss_dssp CGGGCCEEEECCHHHHHHHHHH------------HTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcccceEEEEECHHHHHHHHHH------------HhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 889 69999999888765321 0112345666777777777775443214788889999999999999
Q ss_pred HHccCCcc
Q psy8733 410 IDNSDKFY 417 (621)
Q Consensus 410 L~~~~g~~ 417 (621)
|+++ |+.
T Consensus 305 L~~~-g~~ 311 (389)
T 1gd9_A 305 LNEM-GLP 311 (389)
T ss_dssp HHHT-TCC
T ss_pred HHHc-CCe
Confidence 9887 443
No 61
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.59 E-value=8e-14 Score=147.36 Aligned_cols=127 Identities=14% Similarity=0.161 Sum_probs=99.0
Q ss_pred CceEEEEecccccccccccc-----ccccCCCcEEEecccccCCC-c--------ccccc-cceEEecccccc-CCCccE
Q psy8733 273 EASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSR-K--------FDVSK-FGVIIAGAQKNI-GPAGIT 336 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~-p--------IDv~~-~gvl~asaqK~l-GP~Glg 336 (621)
++++|.+++..|.+|...|+ +++++|+++|+|.++++|.. + +++.. .++++.|.+|++ |++| |
T Consensus 177 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s~sK~~~~~~g-G 255 (401)
T 1fc4_A 177 RHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGTLGKALGGASG-G 255 (401)
T ss_dssp SSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSSSC-E
T ss_pred CceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEecchhhccCCCC-E
Confidence 68899999999999999985 45688999999999986654 2 55543 458899999999 7888 9
Q ss_pred EEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 337 VVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 337 ~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
+++.++++++++....+.+ ..-.+++....+++.++++++.+ .+.+.++.+++.+++++.|+++
T Consensus 256 ~~~~~~~~~~~l~~~~~~~----------~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~~ 319 (401)
T 1fc4_A 256 YTAARKEVVEWLRQRSRPY----------LFSNSLAPAIVAASIKVLEMVEA---GSELRDRLWANARQFREQMSAA 319 (401)
T ss_dssp EEEECHHHHHHHHHHCHHH----------HHSCCCCHHHHHHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEcCHHHHHHHHHhCcCc----------eeCCCCCHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999887664211100 01247778888888899998764 3678888999999999999987
No 62
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.59 E-value=7.4e-14 Score=154.92 Aligned_cols=145 Identities=14% Similarity=0.107 Sum_probs=105.7
Q ss_pred ceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCcc-----ccc---ccceEEeccccccC-CCccEEEE
Q psy8733 274 ASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKF-----DVS---KFGVIIAGAQKNIG-PAGITVVI 339 (621)
Q Consensus 274 t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pI-----Dv~---~~gvl~asaqK~lG-P~Glg~li 339 (621)
+++|.+++..|.+|...|+ +++++|++++||++++.+.... ++. ..|++++++|||++ |.|.|+++
T Consensus 249 ~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g~g~l~ 328 (511)
T 3vp6_A 249 PFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQCSAIL 328 (511)
T ss_dssp EEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSCCEEEE
T ss_pred cEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcCeEEEE
Confidence 8899999999999999886 4568999999999999887633 233 33689999999996 99999999
Q ss_pred Echh-HHhhhCCCCCceeeccccc-----c--CCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 340 VRED-LLEYALPITPTVFHFKINA-----D--NNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 340 vr~~-ll~~~~~~~P~~ld~~~~~-----~--~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
++++ ++.+.....+.|+...... . ......+.+ +.+.++..+++.+..+ |++++.++..++++++++.|+
T Consensus 329 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~-~~al~~~~al~~~g~~-gl~~~~~~~~~~a~~l~~~L~ 406 (511)
T 3vp6_A 329 VKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRH-VDIFKFWLMWKAKGTV-GFENQINKCLELAEYLYAKIK 406 (511)
T ss_dssp ESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCC-CCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred EeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCc-hHHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 9876 4555433344443211100 0 001111111 2456777888888777 899999999999999999999
Q ss_pred ccCCcccCc
Q psy8733 412 NSDKFYECP 420 (621)
Q Consensus 412 ~~~g~~~~~ 420 (621)
+.+||.+..
T Consensus 407 ~~pg~~l~~ 415 (511)
T 3vp6_A 407 NREEFEMVF 415 (511)
T ss_dssp SCTTEEESS
T ss_pred cCCCEEEEe
Confidence 998887654
No 63
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.59 E-value=8.6e-15 Score=162.18 Aligned_cols=283 Identities=11% Similarity=0.068 Sum_probs=155.2
Q ss_pred CceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHH-HHHHHHHHHhCCCCC-CEEEEEcCCcchhh
Q psy8733 51 PVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINN-DTQAALRELLNVPNN-YKILFLQGGGTGMF 128 (621)
Q Consensus 51 ~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~-~ar~~La~Ll~~p~~-yeI~f~~gggT~~~ 128 (621)
..+++.|+|..+|++|+++|...+.+..+.|.. ...++.+.++.+.++ .+|+.++++||++.+ +.+.+.++|||.++
T Consensus 55 ~~i~lias~n~~~~~V~eA~~~~l~~~y~~G~~-g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An 133 (490)
T 2a7v_A 55 RGLELIASENFCSRAALEALGSCLNNKYSEGYP-GKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPAN 133 (490)
T ss_dssp HSEECCTTCCCCCHHHHHHHTSGGGTCCCCC-------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHH
T ss_pred cCceEECCCCCCCHHHHHHHHHHHcCCCccCCC-cccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHH
Confidence 468999999999999999999998775433321 111222334444454 789999999999763 22344456788833
Q ss_pred hHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHH---HHHhCCceeeecccccc
Q psy8733 129 AAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAE---AEKYGKVNLVIPKVSKY 205 (621)
Q Consensus 129 ~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~---a~~~G~~~~~~~~~~~~ 205 (621)
.+ +-.++ +++||+|++..- .+ .|++.+.+... +...|......+
T Consensus 134 ~~-----al~al-~~pGD~Vl~~~~----~h------------------~g~l~h~~~~~~~~i~~~g~~~~~~~----- 180 (490)
T 2a7v_A 134 LA-----VYTAL-LQPHDRIMGLDL----PD------------------GGHLTHGYMSDVKRISATSIFFESMP----- 180 (490)
T ss_dssp HH-----HHHHH-CCSCEECCC----------------------------------------------------------
T ss_pred HH-----HHHHH-cCCCCEecccCc----cc------------------cccccchhhhcchhHHHcCCeEEEEe-----
Confidence 32 21222 567777766531 00 11121211100 001111000000
Q ss_pred cccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEeccccc
Q psy8733 206 VSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETV 285 (621)
Q Consensus 206 ~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~ 285 (621)
| . ++ ++...+|+|++ ++.....++++|.++.. .
T Consensus 181 -------------------~-~---vd-~~~~~iD~d~l---------------------e~~l~~~~~klIi~~~s--~ 213 (490)
T 2a7v_A 181 -------------------Y-K---LN-PKTGLIDYNQL---------------------ALTARLFRPRLIIAGTS--A 213 (490)
T ss_dssp -------------------C-C---BC-TTTCSBCHHHH---------------------HHHHHHHCCSEEEECCS--S
T ss_pred -------------------c-c---cc-cccCCcCHHHH---------------------HHHHhhcCCcEEEEcCC--C
Confidence 0 0 00 00001222221 11101135677766543 3
Q ss_pred ccccccc-----ccccCCCcEEEecccccC-----CCcccccccceEEecccccc-CCCccEEEEEchhHHhhhCCC--C
Q psy8733 286 DGVEFNY-----IPDSQGIPLVSDMSSNFL-----SRKFDVSKFGVIIAGAQKNI-GPAGITVVIVREDLLEYALPI--T 352 (621)
Q Consensus 286 tGv~~p~-----i~~~~g~llvvDavSs~G-----~~pIDv~~~gvl~asaqK~l-GP~Glg~livr~~ll~~~~~~--~ 352 (621)
+|...|+ +++++|+++++|+++.+| ..+.+++..|++++|.||+| ||.| |+++.++++.. ..+. .
T Consensus 214 ~~~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~~aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~-~~~~~~~ 291 (490)
T 2a7v_A 214 YARLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARS-GLIFYRKGVKA-VDPKTGR 291 (490)
T ss_dssp CCSCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCSCSC-EEEEEECSEEE-EETTTEE
T ss_pred CCCcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCCCCCEEEECCcccCccccc-hheeeccchhc-ccccccc
Confidence 4666664 567899999999998754 23444555679999999999 6998 99998876321 0000 0
Q ss_pred Cceeecccccc---CCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCccc
Q psy8733 353 PTVFHFKINAD---NNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYE 418 (621)
Q Consensus 353 P~~ld~~~~~~---~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~ 418 (621)
+.+.++....+ .+...++|+...+.++..|++.+.+. +.+...++..+++++|.+.|.+. |+.+
T Consensus 292 ~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~-~~~~~~~~~~~na~~L~~~L~~~-G~~v 358 (490)
T 2a7v_A 292 EIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTP-MFREYSLQVLKNARAMADALLER-GYSL 358 (490)
T ss_dssp EEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred hhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHc-CcEE
Confidence 11111211111 23345689999999999999988755 46888889999999999999987 4543
No 64
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.58 E-value=2.6e-13 Score=145.96 Aligned_cols=130 Identities=11% Similarity=0.063 Sum_probs=102.1
Q ss_pred CceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCc---------ccccc-cceEEeccccccCCCccEE
Q psy8733 273 EASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRK---------FDVSK-FGVIIAGAQKNIGPAGITV 337 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~p---------IDv~~-~gvl~asaqK~lGP~Glg~ 337 (621)
++++|.+++..+.+|...|+ +++++|+++|+|.+++.|... +++.. .++++.|.+|++|++| |+
T Consensus 194 ~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g-G~ 272 (427)
T 2w8t_A 194 PAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG-GF 272 (427)
T ss_dssp SCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC-EE
T ss_pred CCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC-CE
Confidence 68999999999999999985 456899999999999988765 55543 3588999999999999 99
Q ss_pred EEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcc
Q psy8733 338 VIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFY 417 (621)
Q Consensus 338 livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~ 417 (621)
++.++++++.+.+....+ ...++++...++++.++|+++.+ ++.+.++.+++.+++++.|+++ |+.
T Consensus 273 v~~~~~l~~~l~~~~~~~----------~~~~~~~~~~~aa~~~al~~~~~---~~~~~~~~~~~~~~l~~~L~~~-g~~ 338 (427)
T 2w8t_A 273 VVSNHPKFEAVRLACRPY----------IFTASLPPSVVATATTSIRKLMT---AHEKRERLWSNARALHGGLKAM-GFR 338 (427)
T ss_dssp EEECCTTGGGGGGTCHHH----------HSSCCCCHHHHHHHHHHHHHHTS---CHHHHHHHHHHHHHHHHHHHHH-TCE
T ss_pred EEeCHHHHHHHHHhcccc----------cccCCCCHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 999999887664321111 01246677788888889998753 5788899999999999999887 353
No 65
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.58 E-value=4.7e-14 Score=147.48 Aligned_cols=259 Identities=11% Similarity=0.079 Sum_probs=159.7
Q ss_pred CceeccCCC--CCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhC--CCCCCEEEEEcCCcch
Q psy8733 51 PVINFGAGP--AKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLN--VPNNYKILFLQGGGTG 126 (621)
Q Consensus 51 ~~~lf~aGP--s~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~--~p~~yeI~f~~gggT~ 126 (621)
.++.|+.|- -+.|++|++++.+.+.+. . .+.+....++.+++++.+++.+| ++.+ +|+|+ +|||+
T Consensus 25 ~~i~l~~~~~~~~~~~~v~~a~~~~~~~~----~-----~~y~~~~~~~~~~l~~~l~~~~g~~~~~~-~v~~~-~g~~~ 93 (383)
T 3kax_A 25 ELIHAWIADMDFEVPQPIQTALKKRIEHP----I-----FGYTLPPENIGDIICNWTKKQYNWDIQKE-WIVFS-AGIVP 93 (383)
T ss_dssp CCEECCCSSCSSCCCHHHHHHHHHHHHSC----C-----CCCCCCCTTHHHHHHHHHHHHHCCCCCGG-GEEEE-SCHHH
T ss_pred CeeecccccCCCCCCHHHHHHHHHHHhcC----C-----CCCCCCCHHHHHHHHHHHHHHhCCCCChh-hEEEc-CCHHH
Confidence 344444443 356899999999987531 0 11111134567788888899988 4333 68876 67888
Q ss_pred hhhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeeccccccc
Q psy8733 127 MFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYV 206 (621)
Q Consensus 127 ~~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~ 206 (621)
++++ ++..++.+|+++.+..+++.+. ...++..|...+..+..
T Consensus 94 -----a~~~--------------------------~~~~l~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~~~~~---- 136 (383)
T 3kax_A 94 -----ALST--------------------------SIQAFTKENESVLVQPPIYPPF--FEMVTTNNRQLCVSPLQ---- 136 (383)
T ss_dssp -----HHHH--------------------------HHHHHCCTTCEEEECSSCCHHH--HHHHHHTTCEEEECCCE----
T ss_pred -----HHHH--------------------------HHHHhCCCCCEEEEcCCCcHHH--HHHHHHcCCEEEeccce----
Confidence 3433 2333444555554444444432 34566667543222110
Q ss_pred ccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccc
Q psy8733 207 SIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVD 286 (621)
Q Consensus 207 ~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~t 286 (621)
+ -.+.|. ++++++ +. .+++++++|.+++..|.+
T Consensus 137 -------~----------------~~~~~~--~d~~~l---------------------~~-~l~~~~~~v~i~~p~npt 169 (383)
T 3kax_A 137 -------K----------------QNDTYA--IDFEHL---------------------EK-QFQQGVKLMLLCSPHNPI 169 (383)
T ss_dssp -------E----------------ETTEEE--CCHHHH---------------------HH-HHTTTCCEEEEESSBTTT
T ss_pred -------e----------------cCCcEE--EcHHHH---------------------HH-HhCcCCeEEEEeCCCCCC
Confidence 0 000010 122221 11 236789999999999999
Q ss_pred cccccc-----c---cccCCCcEEEecccccCC----Cccccccc-----c--eEEeccccccCCCc--cEEEEE-chhH
Q psy8733 287 GVEFNY-----I---PDSQGIPLVSDMSSNFLS----RKFDVSKF-----G--VIIAGAQKNIGPAG--ITVVIV-REDL 344 (621)
Q Consensus 287 Gv~~p~-----i---~~~~g~llvvDavSs~G~----~pIDv~~~-----g--vl~asaqK~lGP~G--lg~liv-r~~l 344 (621)
|+..|. + ++++|+++|+|.+++.+. .+.++..+ + +++.|.+|++|++| +|+++. ++++
T Consensus 170 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 249 (383)
T 3kax_A 170 GRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNEKL 249 (383)
T ss_dssp TBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCHHH
T ss_pred CcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCHHH
Confidence 999874 2 567899999999998733 23344332 3 77889999999777 688887 5777
Q ss_pred HhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc-cCCcc
Q psy8733 345 LEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN-SDKFY 417 (621)
Q Consensus 345 l~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~-~~g~~ 417 (621)
.+.+... .....+.|++....+++.++++...+ .++.+.++.+++.+++++.|++ ++|+.
T Consensus 250 ~~~~~~~-----------~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 310 (383)
T 3kax_A 250 RQAFTSI-----------QYRQGFHGLNIFAYTAMQSAYTECND--WLNEIRFYIEDNAKFACEYIKDHIPTLS 310 (383)
T ss_dssp HHHHHHH-----------HHHTTCCCCCHHHHHHHHHHTTTCHH--HHHHHHHHHHHHHHHHHHHHHHHCTTCE
T ss_pred HHHHHHH-----------HhhcccCCCCHHHHHHHHHHHHhhHH--HHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 6654210 01122457888888888888775333 3788889999999999999987 56554
No 66
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.58 E-value=5.2e-14 Score=148.70 Aligned_cols=257 Identities=9% Similarity=0.021 Sum_probs=146.8
Q ss_pred CceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhH
Q psy8733 51 PVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAA 130 (621)
Q Consensus 51 ~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a 130 (621)
.+.++..|+..+|+++++++.+.+..... . .......+.|+.++++++.+ +++|+ +|||+
T Consensus 23 ~~~~l~~~~p~~~~~~~~a~~~~~~~~~~--------~----~~~~~~~~l~~~la~~~~~~---~~i~~-~~gt~---- 82 (391)
T 3dr4_A 23 DLPRISVAAPRLDGNERDYVLECMDTTWI--------S----SVGRFIVEFEKAFADYCGVK---HAIAC-NNGTT---- 82 (391)
T ss_dssp -----CCCCCCCCSSHHHHHHHHHHHTCC--------S----SCSHHHHHHHHHHHHHHTCS---EEEEE-SSHHH----
T ss_pred CCceeccCCCCCCHHHHHHHHHHHHcCCc--------c----CCChHHHHHHHHHHHHhCCC---cEEEe-CCHHH----
Confidence 46788888889999999999988743111 1 01246788999999999986 57776 67888
Q ss_pred HHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCC
Q psy8733 131 VAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPD 210 (621)
Q Consensus 131 ~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~ 210 (621)
|++++...+++++||+|++.. .++.+. ...++..|...+..+..
T Consensus 83 -al~~~l~~~~~~~gd~vl~~~-------------------------~~~~~~--~~~~~~~g~~~~~~~~~-------- 126 (391)
T 3dr4_A 83 -ALHLALVAMGIGPGDEVIVPS-------------------------LTYIAS--ANSVTYCGATPVLVDND-------- 126 (391)
T ss_dssp -HHHHHHHHHTCCTTCEEEEES-------------------------SSCTHH--HHHHHHTTCEEEEECBC--------
T ss_pred -HHHHHHHHcCCCCcCEEEECC-------------------------CchHHH--HHHHHHCCCEEEEEecC--------
Confidence 455444444455555555543 333332 23345566543322210
Q ss_pred CCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccccc
Q psy8733 211 QSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEF 290 (621)
Q Consensus 211 ~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~~ 290 (621)
++ .|. +++++ .+ -.+++++++|.++ +++|...
T Consensus 127 --~~-------------------~~~--~d~~~---------------------l~-~~~~~~~~~v~~~---n~tG~~~ 158 (391)
T 3dr4_A 127 --PR-------------------TFN--LDAAK---------------------LE-ALITPRTKAIMPV---HLYGQIC 158 (391)
T ss_dssp --TT-------------------TCS--BCGGG---------------------SG-GGCCTTEEEECCB---CGGGCCC
T ss_pred --cc-------------------ccC--cCHHH---------------------HH-HhcCCCceEEEEE---CCCCChh
Confidence 00 000 01001 11 1255678888753 4789988
Q ss_pred cc-----ccccCCCcEEEecccccCCCcccc--ccc-c--eEEeccccccCCCccEEEEEchh-HHhhhCCCCC--ceee
Q psy8733 291 NY-----IPDSQGIPLVSDMSSNFLSRKFDV--SKF-G--VIIAGAQKNIGPAGITVVIVRED-LLEYALPITP--TVFH 357 (621)
Q Consensus 291 p~-----i~~~~g~llvvDavSs~G~~pIDv--~~~-g--vl~asaqK~lGP~Glg~livr~~-ll~~~~~~~P--~~ld 357 (621)
|+ +++++|+++|+|++++.|....+. ..+ | +..+++||++++...|+++.+++ +.+++.+... ...+
T Consensus 159 ~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~l~~g~gg~~~~~~~~~~~~~~~~~~~g~~~~ 238 (391)
T 3dr4_A 159 DMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDPN 238 (391)
T ss_dssp CHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHHBTTCCTT
T ss_pred hHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCCCcCCcCCeEEEEECCHHHHHHHHHHHhcCCCCC
Confidence 85 456899999999999998875543 333 3 44555899997534556666544 5554432100 0000
Q ss_pred ccc-cccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 358 FKI-NADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 358 ~~~-~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
... ....+..+ .+..+.+++.+.... +++.+.++.+++++++++.|.++ |+...
T Consensus 239 ~~~~~~~~g~~~------~~~~l~aa~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 293 (391)
T 3dr4_A 239 RRYWFPIVGFNY------RMTNIQAAIGLAQLE-RVDEHLAARERVVGWYEQKLARL-GNRVT 293 (391)
T ss_dssp STTCCSSCCCBC------BCCHHHHHHHHHHHH-THHHHHHHHHHHHHHHHHHHGGG-TTSEE
T ss_pred Cccccccccccc------CCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcC-Ccccc
Confidence 000 00011111 123344455555555 78999999999999999999988 56543
No 67
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.58 E-value=6e-14 Score=147.12 Aligned_cols=133 Identities=13% Similarity=0.081 Sum_probs=98.1
Q ss_pred CCceEEEEecccccccccccc--------ccccCCCcEEEecccccCC----Ccccccc-----cc--eEEeccccccCC
Q psy8733 272 PEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLS----RKFDVSK-----FG--VIIAGAQKNIGP 332 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~----~pIDv~~-----~g--vl~asaqK~lGP 332 (621)
+++++|.+++..|.+|...+. +++++|+++|+|.+++.+. .+.++.. .| +++.|.+|++|+
T Consensus 159 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~ 238 (391)
T 3dzz_A 159 PSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNL 238 (391)
T ss_dssp TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTC
T ss_pred cCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccc
Confidence 689999999999999999652 3568999999999998532 3444433 34 889999999986
Q ss_pred Cc--cEEEEEc-hhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Q psy8733 333 AG--ITVVIVR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQE 409 (621)
Q Consensus 333 ~G--lg~livr-~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~ 409 (621)
+| +|+++.+ +++.+++.. .. ......+++....+++.++++...+ .++.+.++.+++.+++++.
T Consensus 239 ~G~r~G~~~~~~~~~~~~~~~-------~~----~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~ 305 (391)
T 3dzz_A 239 AALHAACAIIPNPDLRARAEE-------SF----FLAGIGEPNLLAIPAAIAAYEEGHD--WLRELKQVLRDNFAYAREF 305 (391)
T ss_dssp TTTCCEEEECCSHHHHHHHHH-------HH----HHHTCSSCCTTHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHH
T ss_pred cchhheEEEECCHHHHHHHHH-------HH----HhhccCCCCHHHHHHHHHHHhccHH--HHHHHHHHHHHHHHHHHHH
Confidence 66 8999997 777765532 00 0112345666777777778776433 3788899999999999999
Q ss_pred HHc-cCCcc
Q psy8733 410 IDN-SDKFY 417 (621)
Q Consensus 410 L~~-~~g~~ 417 (621)
|++ ++|+.
T Consensus 306 l~~~~~~~~ 314 (391)
T 3dzz_A 306 LAKEVPEVK 314 (391)
T ss_dssp HHHHCTTSE
T ss_pred HHhhCCCcE
Confidence 998 66654
No 68
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.58 E-value=1.7e-14 Score=152.30 Aligned_cols=130 Identities=12% Similarity=0.131 Sum_probs=98.0
Q ss_pred CceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCccccc-----ccceEEeccccccC-CCccEEEEEc
Q psy8733 273 EASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVS-----KFGVIIAGAQKNIG-PAGITVVIVR 341 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~-----~~gvl~asaqK~lG-P~Glg~livr 341 (621)
++++|.++ ++..|...++ +++++|+++|+|.++++|..+.+.. ..|++++|.||++| |.| |+++.+
T Consensus 163 ~~~~v~~~--~~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G~~~~~ 239 (405)
T 2vi8_A 163 RPKLIVAA--AAAYPRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLRGPRG-GMILCQ 239 (405)
T ss_dssp CCSEEEEC--CSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTCCCSC-EEEEEC
T ss_pred CCeEEEEe--CCCCCccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCCCCCC-eEEEEc
Confidence 57777764 3445665554 4567899999999999764433332 34588999999996 999 999999
Q ss_pred hhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCccc
Q psy8733 342 EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYE 418 (621)
Q Consensus 342 ~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~ 418 (621)
+++.+++.+. .....++||+...+.++.++++++.+. +++++.++.+++++++++.|+++ |+..
T Consensus 240 ~~~~~~l~~~-----------~~~~~~~~~~~~~~aa~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~ 303 (405)
T 2vi8_A 240 EQFAKQIDKA-----------IFPGIQGGPLMHVIAAKAVAFGEALQD-DFKAYAKRVVDNAKRLASALQNE-GFTL 303 (405)
T ss_dssp HHHHHHHHHH-----------HTTTTCSSCCHHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHHT-TCEE
T ss_pred HHHHHHHHhh-----------hcccccCCCCHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHhC-CCeE
Confidence 9887765321 012345788888899999999998766 78999999999999999999987 4543
No 69
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.57 E-value=1.3e-13 Score=144.63 Aligned_cols=249 Identities=11% Similarity=0.089 Sum_probs=155.2
Q ss_pred CCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhC--CCCCCEEEEEcCCcchhhhHHHHHHhhh
Q psy8733 61 KLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLN--VPNNYKILFLQGGGTGMFAAVAMNLISS 138 (621)
Q Consensus 61 ~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~--~p~~yeI~f~~gggT~~~~a~alNlla~ 138 (621)
+.|++|++++.+.+.+. . .+.+....++.+++++.+++++| ++.+ +|+|+ +|||+ +++++
T Consensus 45 ~~~~~v~~a~~~~~~~~----~-----~~y~~~~~~~~~~l~~~l~~~~g~~~~~~-~v~~~-~g~~~-----a~~~~-- 106 (391)
T 4dq6_A 45 KAAPCIIDSLKNRLEQE----I-----YGYTTRPDSYNESIVNWLYRRHNWKIKSE-WLIYS-PGVIP-----AISLL-- 106 (391)
T ss_dssp CCCHHHHHHHHHHHTTC----C-----CCCBCCCHHHHHHHHHHHHHHHCCCCCGG-GEEEE-SCHHH-----HHHHH--
T ss_pred CCCHHHHHHHHHHHhCC----C-----CCCCCCCHHHHHHHHHHHHHHhCCCCcHH-HeEEc-CChHH-----HHHHH--
Confidence 56899999999987431 0 11111125677888999999999 4433 68876 67888 34332
Q ss_pred ccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCCCCCCCCCC
Q psy8733 139 SMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDP 218 (621)
Q Consensus 139 ~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (621)
+..++.+|+++.+..+++.+ +...++..|...+..+.. ++.
T Consensus 107 ------------------------~~~~~~~gd~vl~~~~~~~~--~~~~~~~~g~~~~~~~~~----------~~~--- 147 (391)
T 4dq6_A 107 ------------------------INELTKANDKIMIQEPVYSP--FNSVVKNNNRELIISPLQ----------KLE--- 147 (391)
T ss_dssp ------------------------HHHHSCTTCEEEECSSCCTH--HHHHHHHTTCEEEECCCE----------ECT---
T ss_pred ------------------------HHHhCCCCCEEEEcCCCCHH--HHHHHHHcCCeEEeeeee----------ecC---
Confidence 23334445554444444443 234556667543222100 000
Q ss_pred CccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccccccc------
Q psy8733 219 EASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEFNY------ 292 (621)
Q Consensus 219 ~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~~p~------ 292 (621)
++.|. ++++++ +. .+.+ +++|.+++..+.+|+..+.
T Consensus 148 -------------~~~~~--~d~~~l---------------------~~-~l~~-~~~v~i~~p~nptG~~~~~~~l~~i 189 (391)
T 4dq6_A 148 -------------NGNYI--MDYEDI---------------------EN-KIKD-VKLFILCNPHNPVGRVWTKDELKKL 189 (391)
T ss_dssp -------------TSCEE--CCHHHH---------------------HH-HCTT-EEEEEEESSBTTTTBCCCHHHHHHH
T ss_pred -------------CCceE--eeHHHH---------------------HH-Hhhc-CCEEEEECCCCCCCcCcCHHHHHHH
Confidence 00110 122221 11 2344 8999999999999999663
Q ss_pred --ccccCCCcEEEecccccC----CCccccccc-----c--eEEeccccccCCCc--cEEEEEch-hHHhhhCCCCCcee
Q psy8733 293 --IPDSQGIPLVSDMSSNFL----SRKFDVSKF-----G--VIIAGAQKNIGPAG--ITVVIVRE-DLLEYALPITPTVF 356 (621)
Q Consensus 293 --i~~~~g~llvvDavSs~G----~~pIDv~~~-----g--vl~asaqK~lGP~G--lg~livr~-~ll~~~~~~~P~~l 356 (621)
+++++|+++|+|.+++.+ ..+.++..+ + +++.|.+|++|++| +|+++.++ ++.+++..
T Consensus 190 ~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~------ 263 (391)
T 4dq6_A 190 GDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDEKDYKLLDD------ 263 (391)
T ss_dssp HHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHH------
T ss_pred HHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCHHHHHHHHH------
Confidence 356899999999999873 333444433 2 77889999998776 68888886 66655421
Q ss_pred eccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc-cCCcc
Q psy8733 357 HFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN-SDKFY 417 (621)
Q Consensus 357 d~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~-~~g~~ 417 (621)
.. ......|++.....++.++++...+ .++.+.++.+++.+++++.|++ ++|+.
T Consensus 264 -~~----~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 318 (391)
T 4dq6_A 264 -AF----TRIDIKRNNCFSLVATEASYNNGES--WLESFLEYLESNIDFAIKYINENMPKLK 318 (391)
T ss_dssp -HH----HHTTCCCCCHHHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHHHHHHCTTSE
T ss_pred -HH----HhhcCCCCCHHHHHHHHHHHhchHH--HHHHHHHHHHHHHHHHHHHHHhhCCCCE
Confidence 00 1123457888888888888876433 3788899999999999999987 56554
No 70
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.57 E-value=1.7e-13 Score=144.64 Aligned_cols=127 Identities=12% Similarity=0.146 Sum_probs=95.2
Q ss_pred CceEEEEecccccccccccc--------ccccCCCcEEEecccccCC---Cccccccc-c--eEEeccccccCCCc--cE
Q psy8733 273 EASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLS---RKFDVSKF-G--VIIAGAQKNIGPAG--IT 336 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~---~pIDv~~~-g--vl~asaqK~lGP~G--lg 336 (621)
++++|.+++..|.||+..|. +++++|+++|+|.+++.+. .+..+..+ + +++.|.+|++|++| +|
T Consensus 161 ~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G 240 (391)
T 3h14_A 161 DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAVTALELTDECYVINSFSKYFSMTGWRVG 240 (391)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCSSSEEEEESSSTTCCTTSCCE
T ss_pred CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCcChhhcCCCEEEEEechhccCCccceeE
Confidence 78999999999999999883 3467899999999998533 34444444 2 77778899999777 79
Q ss_pred EEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 337 VVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 337 ~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
+++.++++.+.+.. . ......++|....+++.++++ ... .++.+.++.+++.+++++.|++++
T Consensus 241 ~~~~~~~~~~~~~~-------~-----~~~~~~~~~~~~~~a~~~~l~--~~~-~~~~~~~~~~~~~~~l~~~l~~~~ 303 (391)
T 3h14_A 241 WMVVPEDQVRVVER-------I-----AQNMFICAPHASQVAALAALD--CDA-ELQANLDVYKANRKLMLERLPKAG 303 (391)
T ss_dssp EEECCGGGHHHHHH-------H-----HHHTTCCCCHHHHHHHHHHTT--CHH-HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCHHHHHHHHH-------H-----HhhhccCCCHHHHHHHHHHhC--ChH-HHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999888765521 0 012234677777777777777 222 588889999999999999998875
No 71
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.57 E-value=7.5e-14 Score=146.62 Aligned_cols=248 Identities=10% Similarity=0.102 Sum_probs=140.3
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHHH
Q psy8733 53 INFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAVA 132 (621)
Q Consensus 53 ~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~a 132 (621)
..+++++.+++++|++++.+.+..... . ....+++.|+.++++++.+ +++|+ +|||+ |
T Consensus 5 ~~~~~~~~~~~~~v~~a~~~~~~~~~~--------~-----~~~~~~~l~~~la~~~~~~---~~~~~-~sGt~-----a 62 (367)
T 3nyt_A 5 IDLKNQQARIKDKIDAGIQRVLRHGQY--------I-----LGPEVTELEDRLADFVGAK---YCISC-ANGTD-----A 62 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHCCC--------S-----SCHHHHHHHHHHHHHHTCS---EEEEE-SCHHH-----H
T ss_pred ccccccccccCHHHHHHHHHHHhcCCc--------c-----CChHHHHHHHHHHHHhCCC---cEEEe-CCHHH-----H
Confidence 344555557889999999888743110 1 1235788999999999986 57776 67898 4
Q ss_pred HHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCCCC
Q psy8733 133 MNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQS 212 (621)
Q Consensus 133 lNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~ 212 (621)
++++...+++++||+|++... ++.+. ...++..|...+..+..
T Consensus 63 l~~al~~~~~~~gd~Vi~~~~-------------------------~~~~~--~~~~~~~G~~~~~~~~~---------- 105 (367)
T 3nyt_A 63 LQIVQMALGVGPGDEVITPGF-------------------------TYVAT--AETVALLGAKPVYVDID---------- 105 (367)
T ss_dssp HHHHHHHTTCCTTCEEEEESS-------------------------SCTHH--HHHHHHTTCEEEEECBC----------
T ss_pred HHHHHHHhCCCCcCEEEECCC-------------------------ccHHH--HHHHHHcCCEEEEEecC----------
Confidence 555444455666666666543 22221 22345566543322210
Q ss_pred CCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccccccc
Q psy8733 213 TWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEFNY 292 (621)
Q Consensus 213 ~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~~p~ 292 (621)
+ + .|. +++++ .+ -.+++++++|. .++.+|...|+
T Consensus 106 ~--~-----------------~~~--~d~~~---------------------l~-~~i~~~~~~v~---~~~~~G~~~~~ 139 (367)
T 3nyt_A 106 P--R-----------------TYN--LDPQL---------------------LE-AAITPRTKAII---PVSLYGQCADF 139 (367)
T ss_dssp T--T-----------------TCS--BCGGG---------------------TG-GGCCTTEEEEC---CBCGGGCCCCH
T ss_pred C--c-----------------cCC--cCHHH---------------------HH-HhcCcCCcEEE---eeCCccChhhH
Confidence 0 0 000 01111 11 13567888887 33477988875
Q ss_pred -----ccccCCCcEEEecccccCCCccccc---cc-ceEEec--cccccCCCc-cEEEEEc-hhHHhhhCCCCC-c-eee
Q psy8733 293 -----IPDSQGIPLVSDMSSNFLSRKFDVS---KF-GVIIAG--AQKNIGPAG-ITVVIVR-EDLLEYALPITP-T-VFH 357 (621)
Q Consensus 293 -----i~~~~g~llvvDavSs~G~~pIDv~---~~-gvl~as--aqK~lGP~G-lg~livr-~~ll~~~~~~~P-~-~ld 357 (621)
+++++|+++|+|++|++|.. .+.. .+ |++++| ++|++|++| .|+++.+ +++.+++.+... . ...
T Consensus 140 ~~i~~la~~~~~~li~D~a~~~g~~-~~~~~~~~~~di~~~Sf~~~K~l~~~g~gg~~~~~~~~l~~~~~~~~~~g~~~~ 218 (367)
T 3nyt_A 140 DAINAIASKYGIPVIEDAAQSFGAS-YKGKRSCNLSTVACTSFFPSAPLGCYGDGGAIFTNDDELATAIRQIARHGQDRR 218 (367)
T ss_dssp HHHHHHHHHTTCCBEEECTTTTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHTBTTEEET
T ss_pred HHHHHHHHHcCCEEEEECccccCCe-ECCeeccCCCCEEEEECCCCCcCCCcCceeEEEeCCHHHHHHHHHHHhcCCCcC
Confidence 45789999999999998875 3322 23 366666 799999866 4455553 556555433111 0 000
Q ss_pred ccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 358 FKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 358 ~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
|.. ...+..+..++..... ....++ .++.+.++.+++++++++.|++++
T Consensus 219 ~~~-~~~g~~~~~~~~~aa~-~~~~l~------~~~~~~~~~~~~~~~~~~~L~~~~ 267 (367)
T 3nyt_A 219 YHH-IRVGVNSRLDTLQAAI-LLPKLE------IFEEEIALRQKVAAEYDLSLKQVG 267 (367)
T ss_dssp TEE-CSCCCBCCCCHHHHHH-HHHHHH------THHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cee-eccCcCCCccHHHHHH-HHHHHH------HHHHHHHHHHHHHHHHHHHhccCC
Confidence 100 0111222233332222 222222 366777888889999999999874
No 72
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.56 E-value=6.7e-14 Score=148.87 Aligned_cols=254 Identities=11% Similarity=0.070 Sum_probs=149.9
Q ss_pred CceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhH
Q psy8733 51 PVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAA 130 (621)
Q Consensus 51 ~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a 130 (621)
..+.+++|..++|++|++++.+.+.+- +... ...+.+.|+.++++++.+ +++|+ ++||+
T Consensus 31 ~~id~~~~~~~~~~~v~~a~~~~~~~~-----------~y~~--~~~~~~l~~~la~~~~~~---~~v~~-~~Gt~---- 89 (399)
T 2oga_A 31 PFLDLKAAYEELRAETDAAIARVLDSG-----------RYLL--GPELEGFEAEFAAYCETD---HAVGV-NSGMD---- 89 (399)
T ss_dssp CSCCHHHHHHHTHHHHHHHHHHHHHHT-----------CCSS--SHHHHHHHHHHHHHTTSS---EEEEE-SCHHH----
T ss_pred cccccCcCCCCCCHHHHHHHHHHHhcC-----------CCCC--chhHHHHHHHHHHHHCCC---eEEEe-cCHHH----
Confidence 456778888778899999999987431 0110 145778999999999986 46776 56788
Q ss_pred HHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCC
Q psy8733 131 VAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPD 210 (621)
Q Consensus 131 ~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~ 210 (621)
+++++...+++++||+|++... ++.+ ....++..|...+..+..
T Consensus 90 -a~~~~l~~~~~~~gd~vl~~~~-------------------------~~~~--~~~~~~~~g~~~~~~~~~-------- 133 (399)
T 2oga_A 90 -ALQLALRGLGIGPGDEVIVPSH-------------------------TYIA--SWLAVSATGATPVPVEPH-------- 133 (399)
T ss_dssp -HHHHHHHHTTCCTTCEEEEESS-------------------------SCTH--HHHHHHHTTCEEEEECBC--------
T ss_pred -HHHHHHHHhCCCCcCEEEECCC-------------------------ccHH--HHHHHHHCCCEEEEEecC--------
Confidence 4555444444566666665542 2222 223445566543322210
Q ss_pred CCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccccc
Q psy8733 211 QSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEF 290 (621)
Q Consensus 211 ~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~~ 290 (621)
+ ..|. ++++++ + -.+++++++|.+ ++++|...
T Consensus 134 --~-------------------~~~~--~d~~~l---------------------~-~~i~~~~~~v~~---~n~tG~~~ 165 (399)
T 2oga_A 134 --E-------------------DHPT--LDPLLV---------------------E-KAITPRTRALLP---VHLYGHPA 165 (399)
T ss_dssp --S-------------------SSSS--BCHHHH---------------------H-HHCCTTEEEECC---BCGGGCCC
T ss_pred --C-------------------CCCC--cCHHHH---------------------H-HhcCCCCeEEEE---eCCcCCcc
Confidence 0 0000 111221 0 124457887774 35789988
Q ss_pred cc-----ccccCCCcEEEecccccCCCccccccc----ceEEeccc--cccCCCc-cEEEEEc-hhHHhhhCCCC--Cce
Q psy8733 291 NY-----IPDSQGIPLVSDMSSNFLSRKFDVSKF----GVIIAGAQ--KNIGPAG-ITVVIVR-EDLLEYALPIT--PTV 355 (621)
Q Consensus 291 p~-----i~~~~g~llvvDavSs~G~~pIDv~~~----gvl~asaq--K~lGP~G-lg~livr-~~ll~~~~~~~--P~~ 355 (621)
|+ +++++|+++|+|.+++.|... +...+ |++++|.| |++|++| .|+++.+ +++++++.+.. ...
T Consensus 166 ~l~~i~~l~~~~~~~li~Dea~~~g~~~-~~~~~~~~~di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~~ 244 (399)
T 2oga_A 166 DMDALRELADRHGLHIVEDAAQAHGARY-RGRRIGAGSSVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGSR 244 (399)
T ss_dssp CHHHHHHHHHHHTCEECEECTTCTTCEE-TTEETTCTTCEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTCS
T ss_pred CHHHHHHHHHHcCCEEEEECcccccCcc-CCeecccccCEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCcc
Confidence 85 456789999999999988642 43322 47888875 9999876 5566665 67766654311 111
Q ss_pred eeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCccc
Q psy8733 356 FHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYE 418 (621)
Q Consensus 356 ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~ 418 (621)
..|.. .......+++....+++.++++++. .+.++.+++++++++.|++++|+..
T Consensus 245 ~~~~~--~~~g~~~~~~~~~~a~~~~~l~~~~------~~~~~~~~~~~~l~~~L~~~~g~~~ 299 (399)
T 2oga_A 245 QKYSH--ETKGTNSRLDEMQAAVLRIRLAHLD------SWNGRRSALAAEYLSGLAGLPGIGL 299 (399)
T ss_dssp STTCC--CSCCCBCCCCHHHHHHHHHHHHTHH------HHHHHHHHHHHHHHHHTTTCTTCBC
T ss_pred ccccc--cccccCCCcCHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHhccCCCccc
Confidence 11110 0011112455566666666666553 4566777888899999988766543
No 73
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.56 E-value=1.2e-13 Score=151.83 Aligned_cols=145 Identities=7% Similarity=-0.055 Sum_probs=99.1
Q ss_pred ceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCccc-----c---cccceEEeccccccC-CCccEEEE
Q psy8733 274 ASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFD-----V---SKFGVIIAGAQKNIG-PAGITVVI 339 (621)
Q Consensus 274 t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pID-----v---~~~gvl~asaqK~lG-P~Glg~li 339 (621)
+.+|.+++.+|.+|...|+ +++++|++++||++++.+....+ + +..|.+.+++|||++ |.|.|+++
T Consensus 235 ~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g~g~l~ 314 (475)
T 3k40_A 235 PFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFDCSAMW 314 (475)
T ss_dssp EEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSSCEEEE
T ss_pred cEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCceEEEE
Confidence 6789999999999999886 45789999999999987653221 2 233799999999996 99999999
Q ss_pred EchhHH-hhhCCCCCceeecccc---c--cCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 340 VREDLL-EYALPITPTVFHFKIN---A--DNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 340 vr~~ll-~~~~~~~P~~ld~~~~---~--~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
++++.+ .+.....+.|+..... . .......+-+ +.+..+..+++.+..+ |++++.++..++++++++.|.++
T Consensus 315 ~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~~l~l~~al~~~g~~-g~~~~~~~~~~~a~~l~~~L~~~ 392 (475)
T 3k40_A 315 LKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRR-FRALKLWFVLRLYGVE-NLQAHIRRHCNFAKQFGDLCVAD 392 (475)
T ss_dssp ESSGGGC---------------------------CCCGG-GTHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EeCHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCc-ccHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHhcC
Confidence 997743 2222223334321110 0 0001112222 3567788889988777 89999999999999999999999
Q ss_pred CCcccCc
Q psy8733 414 DKFYECP 420 (621)
Q Consensus 414 ~g~~~~~ 420 (621)
+||.+..
T Consensus 393 ~g~~l~~ 399 (475)
T 3k40_A 393 SRFELAA 399 (475)
T ss_dssp TTEEESS
T ss_pred CCEEEec
Confidence 8887653
No 74
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.56 E-value=1.2e-12 Score=134.53 Aligned_cols=238 Identities=11% Similarity=0.107 Sum_probs=148.0
Q ss_pred ceeccC-CCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhH
Q psy8733 52 VINFGA-GPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAA 130 (621)
Q Consensus 52 ~~lf~a-GPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a 130 (621)
++|... .|.++|+.|++++.+.+.++.. .+ ...+.+.|+.++++++++.+ +|+|+ +|+|+
T Consensus 19 i~l~~n~~~~~~~~~v~~a~~~~~~~~~~-----------y~--~~~~~~lr~~la~~~~~~~~-~i~~t-~G~~~---- 79 (337)
T 3p1t_A 19 VCLAFNENPEAVEPRVQAAIAAAAARINR-----------YP--FDAEPRVMRKLAEHFSCPED-NLMLV-RGIDE---- 79 (337)
T ss_dssp EECSSCCCCSCCCHHHHHHHHHHGGGTTS-----------CC--TTHHHHHHHHHHHHHTSCGG-GEEEE-SHHHH----
T ss_pred eEeeCCCCCCCCCHHHHHHHHHhhhhhcc-----------CC--CCchHHHHHHHHHHhCcCHH-HEEEe-CCHHH----
Confidence 444433 4667899999999987643211 11 13567889999999999754 68876 66888
Q ss_pred HHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCC
Q psy8733 131 VAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPD 210 (621)
Q Consensus 131 ~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~ 210 (621)
+++++...+ +||+|++.. +++.+ +...++..|...+..+.
T Consensus 80 -~l~~~~~~~---~gd~vl~~~-------------------------p~~~~--~~~~~~~~g~~~~~v~~--------- 119 (337)
T 3p1t_A 80 -CFDRISAEF---SSMRFVTAW-------------------------PGFDG--YRARIAVSGLRHFEIGL--------- 119 (337)
T ss_dssp -HHHHHHHHS---TTSEEEEES-------------------------SSCSH--HHHHHTTSCCEEEEECB---------
T ss_pred -HHHHHHHhc---CCCeEEEeC-------------------------CCcHH--HHHHHHHcCCEEEEecC---------
Confidence 565544433 455555443 33332 23344555653222211
Q ss_pred CCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccccc
Q psy8733 211 QSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEF 290 (621)
Q Consensus 211 ~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~~ 290 (621)
++...+++|+ +..-.++++|.+++..|.||..+
T Consensus 120 -----------------------~~~~~~d~~~------------------------l~~~~~~~~v~i~~p~nptG~~~ 152 (337)
T 3p1t_A 120 -----------------------TDDLLLDPND------------------------LAQVSRDDCVVLANPSNPTGQAL 152 (337)
T ss_dssp -----------------------CTTSSBCHHH------------------------HTTCCTTEEEEEESSCTTTCCCC
T ss_pred -----------------------CCCCCCCHHH------------------------HHhhcCCCEEEEeCCCCCCCCCC
Confidence 0000112222 11114689999999999999999
Q ss_pred cc-----ccccCCCcEEEecccc-cC-CCcccccc--cceEEeccccccCCCcc--EEEEEchhHHhhhCCCCCceeecc
Q psy8733 291 NY-----IPDSQGIPLVSDMSSN-FL-SRKFDVSK--FGVIIAGAQKNIGPAGI--TVVIVREDLLEYALPITPTVFHFK 359 (621)
Q Consensus 291 p~-----i~~~~g~llvvDavSs-~G-~~pIDv~~--~gvl~asaqK~lGP~Gl--g~livr~~ll~~~~~~~P~~ld~~ 359 (621)
|. +++.+++ +|+|.+++ ++ ..+..... .++++.|.+|++|++|+ |+++.++++++++..
T Consensus 153 ~~~~l~~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~--------- 222 (337)
T 3p1t_A 153 SAGELDQLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSYGLAGLRLGALFGPSELIAAMKR--------- 222 (337)
T ss_dssp CHHHHHHHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHT---------
T ss_pred CHHHHHHHHHhCCc-EEEECCChhhccccccccccCCCEEEEeeCchhccCcchheEEEEeCHHHHHHHHh---------
Confidence 95 4456776 55688776 22 22222322 23888999999997775 999999998876632
Q ss_pred ccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 360 INADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 360 ~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
...+.+++.....++.++++... .++...++..++.+++++.|.++
T Consensus 223 -----~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~~ 268 (337)
T 3p1t_A 223 -----KQWFCNVGTLDLHALEAALDNDR---AREAHIAKTLAQRRRVADALRGL 268 (337)
T ss_dssp -----TSCTTCSCHHHHHHHHHHHTCHH---HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----hcCCCCCCHHHHHHHHHHhCCHH---HHHHHHHHHHHHHHHHHHHHHHC
Confidence 12345677777777766665321 35666677777788888988886
No 75
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.56 E-value=1.6e-13 Score=150.18 Aligned_cols=142 Identities=13% Similarity=-0.009 Sum_probs=96.4
Q ss_pred eEEEEecccccccccccc-----ccccCCCcEEEecccccCCCccc-c-------cccceEEeccccccC-CCccEEEEE
Q psy8733 275 SYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFD-V-------SKFGVIIAGAQKNIG-PAGITVVIV 340 (621)
Q Consensus 275 ~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pID-v-------~~~gvl~asaqK~lG-P~Glg~liv 340 (621)
.+|.+++.+|.+|...|+ +++++|+++++|++++.+..+.+ + ...|.+++++||+++ |.|+|++++
T Consensus 237 ~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~~G~l~~ 316 (486)
T 1js3_A 237 FFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWV 316 (486)
T ss_dssp EEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSSCEEEEE
T ss_pred eEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcceEEEEE
Confidence 489999999999999886 45789999999999987765442 2 234688899999997 889999999
Q ss_pred chhH--HhhhCCCCCceeecccc-----cc--CCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 341 REDL--LEYALPITPTVFHFKIN-----AD--NNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 341 r~~l--l~~~~~~~P~~ld~~~~-----~~--~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
+++. .+.+ ...|.|+..... .. ......+.+ +...++..+++.+... |++++.++..++++++++.|.
T Consensus 317 ~~~~~l~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr-~~~~~~~~al~~~g~~-g~~~~~~~~~~~a~~l~~~L~ 393 (486)
T 1js3_A 317 KRRTDLTGAF-KLDPVYLKHSHQGSGLITDYRHWQLPLGRR-FRSLKMWFVFRMYGVK-GLQAYIRKHVQLSHEFEAFVL 393 (486)
T ss_dssp SCHHHHHGGG-C------------CCSCCCGGGSSSCSCCC-CTHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred eCHHHHHHHh-cCCchhhCCCcccccCCCCccccCCCCCCc-hhHHHHHHHHHHHhHH-HHHHHHHHHHHHHHHHHHHHh
Confidence 8764 2333 223334322110 00 000011111 1345666778877666 799999999999999999999
Q ss_pred ccCCcccC
Q psy8733 412 NSDKFYEC 419 (621)
Q Consensus 412 ~~~g~~~~ 419 (621)
+++|+.+.
T Consensus 394 ~~~~~~~~ 401 (486)
T 1js3_A 394 QDPRFEVC 401 (486)
T ss_dssp HCTTEEEC
T ss_pred cCCCeEEe
Confidence 98877654
No 76
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.56 E-value=1.7e-13 Score=143.98 Aligned_cols=243 Identities=14% Similarity=0.126 Sum_probs=156.9
Q ss_pred CCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHHHHHHhhhcc
Q psy8733 61 KLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAVAMNLISSSM 140 (621)
Q Consensus 61 ~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~alNlla~~~ 140 (621)
+.|+.|.+++.+.+.+ .. +.+. .....+.|+.++++++++.+ +|+|+ +|||++ +++
T Consensus 38 ~~~~~v~~a~~~~~~~--~~--------~y~~--~~~~~~l~~~la~~~~~~~~-~v~~~-~g~~~a-----~~~----- 93 (381)
T 1v2d_A 38 PPPPFLLEAVRRALGR--QD--------QYAP--PAGLPALREALAEEFAVEPE-SVVVT-SGATEA-----LYV----- 93 (381)
T ss_dssp CCCHHHHHHHHHHTTT--SC--------SCCC--TTCCHHHHHHHHHHHTSCGG-GEEEE-SSHHHH-----HHH-----
T ss_pred CCCHHHHHHHHHHHHH--hc--------CCCC--CCCCHHHHHHHHHhcCCChh-hEEEc-CChHHH-----HHH-----
Confidence 4689999999998743 10 1110 01356789999999998654 58776 678883 333
Q ss_pred CCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCCCCCCCCCCCc
Q psy8733 141 NVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEA 220 (621)
Q Consensus 141 ~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v 220 (621)
++..++.+|+++.+..+++.+. ...++..|...+..+..
T Consensus 94 ---------------------~~~~~~~~gd~Vl~~~~~~~~~--~~~~~~~g~~~~~v~~~------------------ 132 (381)
T 1v2d_A 94 ---------------------LLQSLVGPGDEVVVLEPFFDVY--LPDAFLAGAKARLVRLD------------------ 132 (381)
T ss_dssp ---------------------HHHHHCCTTCEEEEEESCCTTH--HHHHHHTTCEEEEEECE------------------
T ss_pred ---------------------HHHHhCCCCCEEEEcCCCchhH--HHHHHHcCCEEEEEeCC------------------
Confidence 2333344555555555544442 34556667543222110
Q ss_pred cccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccccccc--------
Q psy8733 221 SYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEFNY-------- 292 (621)
Q Consensus 221 ~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~~p~-------- 292 (621)
.....|. +++|++ + -.+++++++|.+++..|.||...|.
T Consensus 133 ---------~~~~~~~--~d~~~l---------------------~-~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~ 179 (381)
T 1v2d_A 133 ---------LTPEGFR--LDLSAL---------------------E-KALTPRTRALLLNTPMNPTGLVFGERELEAIAR 179 (381)
T ss_dssp ---------EETTEEE--CCHHHH---------------------H-TTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHH
T ss_pred ---------CCCccCC--cCHHHH---------------------H-HhcCcCCEEEEECCCCCCCCCccCHHHHHHHHH
Confidence 0000011 222221 0 1245679999999999999998762
Q ss_pred ccccCCCcEEEecccccC---CCcccccc--c--ceEEeccccccCCCc--cEEEEEchhHHhhhCCCCCceeecccccc
Q psy8733 293 IPDSQGIPLVSDMSSNFL---SRKFDVSK--F--GVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINAD 363 (621)
Q Consensus 293 i~~~~g~llvvDavSs~G---~~pIDv~~--~--gvl~asaqK~lGP~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~ 363 (621)
+++++|+++|+|.+++.+ ..+.++.. . ++++.|.+|++|++| +|++++++++++.+.. ..
T Consensus 180 ~~~~~~~~li~De~~~~~~~g~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~-------~~---- 248 (381)
T 1v2d_A 180 LARAHDLFLISDEVYDELYYGERPRRLREFAPERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAG-------MR---- 248 (381)
T ss_dssp HHHHTTCEEEEECTTTTCBSSSCCCCHHHHCTTTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHH-------HH----
T ss_pred HHHHcCCEEEEEcCccccccCCCCCCHHHhcCCCEEEEeechhhcCCcccceEEEEeCHHHHHHHHH-------HH----
Confidence 345789999999999864 33445442 2 388999999999889 8999999988776531 00
Q ss_pred CCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 364 NNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 364 ~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
.....|++....+++.++|+......+++.+.++.+++++++++.|++.
T Consensus 249 -~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (381)
T 1v2d_A 249 -QWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM 297 (381)
T ss_dssp -HHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -hhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 1123466777788888888866322268999999999999999999885
No 77
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.56 E-value=2.4e-13 Score=143.72 Aligned_cols=127 Identities=10% Similarity=0.076 Sum_probs=93.6
Q ss_pred CceEEEEecccccccccccc-----ccccCCCcEEEecccccCCC---cccc-c------ccceEEeccccccCCCccEE
Q psy8733 273 EASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSR---KFDV-S------KFGVIIAGAQKNIGPAGITV 337 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~---pIDv-~------~~gvl~asaqK~lGP~Glg~ 337 (621)
++++|.+++..+.||...|+ +++++|+++|+|.+++.+.. ..++ + ..++++.|.+|++||+| |+
T Consensus 173 ~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G-G~ 251 (398)
T 3a2b_A 173 SAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG-GF 251 (398)
T ss_dssp SCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC-EE
T ss_pred CceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC-cE
Confidence 68999999999999999885 45678999999999987642 2222 1 13688899999999999 99
Q ss_pred EEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 338 VIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 338 livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
++.++++++++...... ....++++.....++.++|+.+.. ++.+.++.+++.+++++.|+++
T Consensus 252 ~~~~~~~~~~l~~~~~~----------~~~~~~~~~~~~a~~~~~l~~~~~---~~~~~~~~~~~~~~l~~~L~~~ 314 (398)
T 3a2b_A 252 VAGDADVIDFLKHNARS----------VMFSASMTPASVASTLKALEIIQN---EPEHIEKLWKNTDYAKAQLLDH 314 (398)
T ss_dssp EEECHHHHHHHHHHCHH----------HHSSBCCCHHHHHHHHHHHHHHHH---CTHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCHHHHHHHHHhccc----------ceecCCCCHHHHHHHHHHHHHHhh---CHHHHHHHHHHHHHHHHHHHhc
Confidence 99999988765321100 011234455555566678877632 4678888899999999999887
No 78
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.55 E-value=2.8e-13 Score=142.34 Aligned_cols=130 Identities=10% Similarity=0.055 Sum_probs=97.9
Q ss_pred CceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCc---cc-ccc----cceEEeccccccCCCccEEEE
Q psy8733 273 EASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRK---FD-VSK----FGVIIAGAQKNIGPAGITVVI 339 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~p---ID-v~~----~gvl~asaqK~lGP~Glg~li 339 (621)
++++|.+++..+.+|...|+ +++++|+++|+|.+++.|... .. .+. .++++.|.+|++||+| |+++
T Consensus 168 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G-G~~~ 246 (384)
T 1bs0_A 168 GQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFGVSG-AAVL 246 (384)
T ss_dssp SCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTSSCC-EEEE
T ss_pred CCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhhccC-cEEE
Confidence 47888888888999999995 456899999999999877532 11 111 2488999999999999 9999
Q ss_pred EchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 340 VREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 340 vr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
.++++++++......+ ....+++.....++.++++++.+. .++.+.++.+++.+++++.|++++
T Consensus 247 ~~~~~~~~l~~~~~~~----------~~~~~~~~~~~~~~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g 310 (384)
T 1bs0_A 247 CSSTVADYLLQFARHL----------IYSTSMPPAQAQALRASLAVIRSD-EGDARREKLAALITRFRAGVQDLP 310 (384)
T ss_dssp ECHHHHHHHHHHCHHH----------HSSBCCCHHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHHTTSS
T ss_pred eCHHHHHHHHHhchhh----------hcCCCCCHHHHHHHHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999887653211000 001257778888888899988753 367888999999999999998873
No 79
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.54 E-value=2.8e-13 Score=142.42 Aligned_cols=129 Identities=12% Similarity=0.129 Sum_probs=101.4
Q ss_pred CceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCc------cccc----ccceEEeccccccC-CCccE
Q psy8733 273 EASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRK------FDVS----KFGVIIAGAQKNIG-PAGIT 336 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~p------IDv~----~~gvl~asaqK~lG-P~Glg 336 (621)
++++|.+++..+.+|...|+ +++++|+++|+|.+++.|..+ ++.. ..++++.|.+|++| ++| |
T Consensus 175 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-G 253 (399)
T 3tqx_A 175 RFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALGGASG-G 253 (399)
T ss_dssp SSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSCSSCC-E
T ss_pred CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcccCce-E
Confidence 78999999999999999995 456899999999999866533 2221 23588999999997 999 9
Q ss_pred EEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 337 VVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 337 ~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
+++.++++++.+......+ ...+|++...++++.++++++. . +++.+.++.+++.+++++.|++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~L~~~g 319 (399)
T 3tqx_A 254 YTSGHKEIIEWLRNRSRPY----------LFSNTVAPVIVATSLKVLELLK-T-EGPQLRKQLQENSRYFRAGMEKLG 319 (399)
T ss_dssp EEEECHHHHHHHHHHCHHH----------HSSCCCCHHHHHHHHHHHHHHH-H-THHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEcCHHHHHHHHHhCcce----------eccCCCcHHHHHHHHHHHHHHh-h-ccHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999887664211100 1134778888888889999886 3 689999999999999999999873
No 80
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.54 E-value=1.5e-13 Score=146.00 Aligned_cols=241 Identities=13% Similarity=0.073 Sum_probs=149.1
Q ss_pred CCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHHHHHHhhhcc
Q psy8733 61 KLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAVAMNLISSSM 140 (621)
Q Consensus 61 ~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~alNlla~~~ 140 (621)
.++++|++++.+.+.+... .. ....+.+.|+.++++++.+ +|+|+ +|||+ +++++...+
T Consensus 9 ~~~~~v~~a~~~~~~~~~~--------~~----~g~~~~~l~~~la~~~~~~---~v~~~-~ggt~-----al~~~~~~l 67 (394)
T 1o69_A 9 HMGGNELKYIEEVFKSNYI--------AP----LGEFVNRFEQSVKDYSKSE---NALAL-NSATA-----ALHLALRVA 67 (394)
T ss_dssp ---CCHHHHHHHHHHHTTT--------SC----TTHHHHHHHHHHHHHHCCS---EEEEE-SCHHH-----HHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHcCCc--------cC----CChHHHHHHHHHHHHhCCC---cEEEe-CCHHH-----HHHHHHHHc
Confidence 4667899999888753111 10 1146788999999999982 68887 67888 566665555
Q ss_pred CCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCCCCCCCCCCCc
Q psy8733 141 NVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEA 220 (621)
Q Consensus 141 ~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v 220 (621)
++++||+|++... ++.+. ...++..|...+..+.
T Consensus 68 ~~~~gd~Vl~~~~-------------------------~~~~~--~~~~~~~g~~~~~v~~------------------- 101 (394)
T 1o69_A 68 GVKQDDIVLASSF-------------------------TFIAS--VAPICYLKAKPVFIDC------------------- 101 (394)
T ss_dssp TCCTTCEEEEESS-------------------------SCGGG--THHHHHTTCEEEEECB-------------------
T ss_pred CCCCCCEEEECCC-------------------------ccHHH--HHHHHHcCCEEEEEEe-------------------
Confidence 5677777777653 11111 1123345653322211
Q ss_pred cccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCC---CceEEEEecccccccccccc-----
Q psy8733 221 SYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDP---EASYLYYCDNETVDGVEFNY----- 292 (621)
Q Consensus 221 ~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~---~t~~V~~thnET~tGv~~p~----- 292 (621)
+..|. ++++++ +. .+++ ++++|.+++ .+|...++
T Consensus 102 -----------~~~~~--~d~~~l---------------------~~-~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~ 143 (394)
T 1o69_A 102 -----------DETYN--IDVDLL---------------------KL-AIKECEKKPKALILTH---LYGNAAKMDEIVE 143 (394)
T ss_dssp -----------CTTSS--BCHHHH---------------------HH-HHHHCSSCCCEEEEEC---GGGCCCCHHHHHH
T ss_pred -----------CCCCC--cCHHHH---------------------HH-HHhcccCCceEEEEEC---CCCChhhHHHHHH
Confidence 00000 112221 00 1112 688999987 68988775
Q ss_pred ccccCCCcEEEecccccCCCccccc-----ccceEEeccccccCCCccEEEEEc-hhHHhhhCCCCCceee---cccccc
Q psy8733 293 IPDSQGIPLVSDMSSNFLSRKFDVS-----KFGVIIAGAQKNIGPAGITVVIVR-EDLLEYALPITPTVFH---FKINAD 363 (621)
Q Consensus 293 i~~~~g~llvvDavSs~G~~pIDv~-----~~gvl~asaqK~lGP~Glg~livr-~~ll~~~~~~~P~~ld---~~~~~~ 363 (621)
+++++|+++|+|.++++|..+.+.. ..++..+|.+|++||.++|+++.+ +++++++.+....... +-....
T Consensus 144 l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 223 (394)
T 1o69_A 144 ICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEHLD 223 (394)
T ss_dssp HHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSS
T ss_pred HHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccccc
Confidence 4568999999999999877654432 234788888999998899999996 7877766432111100 001122
Q ss_pred CCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 364 NNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 364 ~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
.+..++|+++.+++++.. ++++ +.+.++.+++++++++.|.++
T Consensus 224 ~g~~~~~~~~~aa~~l~~-l~~l------~~~~~~~~~~~~~l~~~L~~~ 266 (394)
T 1o69_A 224 YGYNYRLSNVLGAIGVAQ-MEVL------EQRVLKKREIYEWYKEFLGEY 266 (394)
T ss_dssp CCCBCBCCHHHHHHHHHH-HTTH------HHHHHHHHHHHHHHHHHHTTT
T ss_pred cCcccCcCHHHHHHHHHH-HHHH------HHHHHHHHHHHHHHHHHhccc
Confidence 345567999998887764 5554 445677888889999999875
No 81
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.54 E-value=1.1e-12 Score=143.77 Aligned_cols=142 Identities=16% Similarity=0.154 Sum_probs=95.8
Q ss_pred CCCCceEEEEeccccccccc-ccc-----ccccCCCcEEEecccccCCC-cccccccc--eEEeccccccC-CC-----c
Q psy8733 270 RDPEASYLYYCDNETVDGVE-FNY-----IPDSQGIPLVSDMSSNFLSR-KFDVSKFG--VIIAGAQKNIG-PA-----G 334 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~-~p~-----i~~~~g~llvvDavSs~G~~-pIDv~~~g--vl~asaqK~lG-P~-----G 334 (621)
+++++++|.+++. |.+|+. .++ +++++|+++|+|++++.+.. +++..+++ ++++|.||+++ |. |
T Consensus 200 i~~~t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~s~~K~~~~p~g~gG~~ 278 (474)
T 1wyu_B 200 LGPHVAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHLNLHKTFTVPHGGGGPG 278 (474)
T ss_dssp CSTTEEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEECCTTTTTCCCCTTSCCC
T ss_pred hCCCceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEEeCccccccCCCCCCCC
Confidence 5568999999875 679987 464 45678999999999986654 45555554 89999999997 64 6
Q ss_pred cEEEEEchhHHhhhCCC-----C-Cceeecccccc-CCCccCCchHHHHHHHHHHHHHHH---hhCCHHHHHHHHHHHHH
Q psy8733 335 ITVVIVREDLLEYALPI-----T-PTVFHFKINAD-NNSVYNTPPTFVVHVIQRVFAWIK---RQGGLAKMEQNSLQKSV 404 (621)
Q Consensus 335 lg~livr~~ll~~~~~~-----~-P~~ld~~~~~~-~~s~~~TP~v~~I~aL~~aL~~i~---~~gGl~~i~~r~~~la~ 404 (621)
+|++++++++++++... . ..++++..... ......+++... +.+++.++. .+ |++.+.++..++++
T Consensus 279 ~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~aa~~~l~~~g~~-~l~~~~~~~~~~~~ 354 (474)
T 1wyu_B 279 SGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLA---LVRAWAYIRTLGLE-GLKKAAALAVLNAR 354 (474)
T ss_dssp CCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHH---HHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred eEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHH---HHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 99999999988766421 0 11122211000 011223455543 444455554 44 68888999999999
Q ss_pred HHHHHHHccCCcc
Q psy8733 405 LLYQEIDNSDKFY 417 (621)
Q Consensus 405 ~L~e~L~~~~g~~ 417 (621)
++++.|+++ |+.
T Consensus 355 ~l~~~L~~~-g~~ 366 (474)
T 1wyu_B 355 YLKELLKEK-GYR 366 (474)
T ss_dssp HHHHHHHHT-TCB
T ss_pred HHHHHHhhc-CcE
Confidence 999999987 454
No 82
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.53 E-value=9.7e-14 Score=146.54 Aligned_cols=264 Identities=11% Similarity=0.101 Sum_probs=156.8
Q ss_pred ceeccC---CCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCC--CCEEEEEcCCcch
Q psy8733 52 VINFGA---GPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPN--NYKILFLQGGGTG 126 (621)
Q Consensus 52 ~~lf~a---GPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~--~yeI~f~~gggT~ 126 (621)
++.|+. .|.+.|++|++++.+.+.+....+.+ . +....++.+++++.+++++|++- ..+|+|+ +|||+
T Consensus 41 ~id~~~g~~~~~~~~~~v~~a~~~~~~~~~~~~y~---~---~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~-~g~~~ 113 (407)
T 3nra_A 41 PVDFSHGDVDAHEPTPGAFDLFSAGVQSGGVQAYT---E---YRGDLGIRDLLAPRLAAFTGAPVDARDGLIIT-PGTQG 113 (407)
T ss_dssp CEETTSCCTTTSCCCTTHHHHHHHHHHHTHHHHSC---C---TTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEE-SHHHH
T ss_pred eeeecCcCCCCCCCcHHHHHHHHHHHhcCCCCCcC---C---CCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEe-CCcHH
Confidence 455554 35578999999999988643211100 0 11124567788889999999842 1368886 67888
Q ss_pred hhhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeeccccccc
Q psy8733 127 MFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYV 206 (621)
Q Consensus 127 ~~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~ 206 (621)
++++ ++..++.+|+++.+..+++.+ +...++..|...+..+..
T Consensus 114 -----a~~~--------------------------~~~~l~~~gd~vl~~~~~~~~--~~~~~~~~g~~~~~~~~~---- 156 (407)
T 3nra_A 114 -----ALFL--------------------------AVAATVARGDKVAIVQPDYFA--NRKLVEFFEGEMVPVQLD---- 156 (407)
T ss_dssp -----HHHH--------------------------HHHTTCCTTCEEEEEESCCTH--HHHHHHHTTCEEEEEEBC----
T ss_pred -----HHHH--------------------------HHHHhCCCCCEEEEcCCcccc--hHHHHHHcCCEEEEeecc----
Confidence 3443 233344555555555555444 345566677643332210
Q ss_pred ccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccc
Q psy8733 207 SIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVD 286 (621)
Q Consensus 207 ~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~t 286 (621)
+. ... +..| .++++++ +. .+.+++++|.+++..+.|
T Consensus 157 --~~--~~~----------------~~~~--~~d~~~l---------------------~~-~l~~~~~~v~~~~p~npt 192 (407)
T 3nra_A 157 --YV--SAD----------------ETRA--GLDLTGL---------------------EE-AFKAGARVFLFSNPNNPA 192 (407)
T ss_dssp --CC--SSC----------------CSSC--CBCHHHH---------------------HH-HHHTTCCEEEEESSCTTT
T ss_pred --cc--ccc----------------CcCC--CcCHHHH---------------------HH-HHhhCCcEEEEcCCCCCC
Confidence 00 000 0001 0112221 00 133478899999999999
Q ss_pred ccccc---c-----ccccCCCcEEEecccccC----CCcccccc-----cc--eEEeccccccCCCc--cEEEEEchhHH
Q psy8733 287 GVEFN---Y-----IPDSQGIPLVSDMSSNFL----SRKFDVSK-----FG--VIIAGAQKNIGPAG--ITVVIVREDLL 345 (621)
Q Consensus 287 Gv~~p---~-----i~~~~g~llvvDavSs~G----~~pIDv~~-----~g--vl~asaqK~lGP~G--lg~livr~~ll 345 (621)
|+..| + +++++|+++|+|.+++.+ .....+.. .+ +++.|.+|++|++| +|+++.+++++
T Consensus 193 G~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~ 272 (407)
T 3nra_A 193 GVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSRAII 272 (407)
T ss_dssp CCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECHHHH
T ss_pred CcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCHHHH
Confidence 99988 2 345789999999999873 22333322 33 78889999999776 79999999888
Q ss_pred hhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcc
Q psy8733 346 EYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFY 417 (621)
Q Consensus 346 ~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~ 417 (621)
+.+... . .....+++....+++.++++. ..+.++.+.++.+++.+++++.|++++|+.
T Consensus 273 ~~l~~~-------~-----~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 330 (407)
T 3nra_A 273 ARMEKL-------Q-----AIVSLRAAGYSQAVLRGWFDE--APGWMEDRIARHQAIRDELLHVLRGCEGVF 330 (407)
T ss_dssp HHHHHH-------H-----HHHTSSSCHHHHGGGGGTTCC--CTTHHHHHHHHHHHHHHHHHHHHHTSTTCB
T ss_pred HHHHHH-------H-----hhhccCCChHHHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHHHhcCCCce
Confidence 765321 0 011123344444444444431 112367888888999999999999876554
No 83
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.53 E-value=4.6e-13 Score=140.04 Aligned_cols=131 Identities=9% Similarity=0.007 Sum_probs=98.0
Q ss_pred CCCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC----cccc-cccc--eEEeccccccCCCc
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR----KFDV-SKFG--VIIAGAQKNIGPAG 334 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~----pIDv-~~~g--vl~asaqK~lGP~G 334 (621)
+++++++|.+++..|.||...|. +++++|+++|+|.+++.+.. .++. +.++ +++.|.+|++|++|
T Consensus 143 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 222 (364)
T 1lc5_A 143 LTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSLTKFYAIPG 222 (364)
T ss_dssp CCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEESTTTTTCTT
T ss_pred ccCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEECchhhcCCc
Confidence 34678999999999999999882 34578999999999986542 2443 4444 78899999999788
Q ss_pred --cEEEE-EchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 335 --ITVVI-VREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 335 --lg~li-vr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
+|+++ .++++++++.+.. ...++|....+++.++|+. . . .++.+.++.+++.+++.+.|+
T Consensus 223 ~r~G~~~~~~~~~~~~l~~~~--------------~~~~~~~~~~~~~~~~l~~-~-~-~~~~~~~~~~~~~~~l~~~L~ 285 (364)
T 1lc5_A 223 LRLGYLVNSDDAAMARMRRQQ--------------MPWSVNALAALAGEVALQD-S-A-WQQATWHWLREEGARFYQALC 285 (364)
T ss_dssp TCCEEEECCCHHHHHHHHHHS--------------CTTCSCHHHHHHHHHGGGC-H-H-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEECCHHHHHHHHHhC--------------CCCCCCHHHHHHHHHHHhC-c-H-HHHHHHHHHHHHHHHHHHHHh
Confidence 69999 8999887653210 1236677777777777764 1 2 478888889999999999998
Q ss_pred ccCCcc
Q psy8733 412 NSDKFY 417 (621)
Q Consensus 412 ~~~g~~ 417 (621)
+++|+.
T Consensus 286 ~~~~~~ 291 (364)
T 1lc5_A 286 QLPLLT 291 (364)
T ss_dssp TSTTEE
T ss_pred cCCCCE
Confidence 876554
No 84
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.53 E-value=7.1e-13 Score=139.62 Aligned_cols=249 Identities=14% Similarity=0.086 Sum_probs=142.7
Q ss_pred CCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHHHHHHhhhccC
Q psy8733 62 LPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAVAMNLISSSMN 141 (621)
Q Consensus 62 ~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~alNlla~~~~ 141 (621)
++++|++++.+.+.+. . ..+.. ...+++.|+.++++++.++ .|+ ++ +||+ |++++...++
T Consensus 15 ~~~~~~~a~~~~l~~~----~----~~~~~---~~~~~~l~~~la~~~~~~~--~i~-~~-sGt~-----al~~~l~~l~ 74 (388)
T 1b9h_A 15 YDDAERNGLVRALEQG----Q----WWRMG---GDEVNSFEREFAAHHGAAH--ALA-VT-NGTH-----ALELALQVMG 74 (388)
T ss_dssp CCHHHHHHHHHHHHTS----C----CBTTT---CSHHHHHHHHHHHHTTCSE--EEE-ES-CHHH-----HHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHcC----C----eeecC---CHHHHHHHHHHHHHhCCCe--EEE-eC-CHHH-----HHHHHHHHcC
Confidence 5689999999987541 0 01111 2467889999999999862 454 43 4588 5666555555
Q ss_pred CCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCCCCCCCCCCCcc
Q psy8733 142 VPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEAS 221 (621)
Q Consensus 142 ~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 221 (621)
+++||+|++... ++.+. ...++..|...+..+..
T Consensus 75 ~~~gd~Vi~~~~-------------------------~~~~~--~~~~~~~g~~~~~v~~~------------------- 108 (388)
T 1b9h_A 75 VGPGTEVIVPAF-------------------------TFISS--SQAAQRLGAVTVPVDVD------------------- 108 (388)
T ss_dssp CCTTCEEEEESS-------------------------SCTHH--HHHHHHTTCEEEEECBC-------------------
T ss_pred CCCcCEEEECCC-------------------------ccHHH--HHHHHHcCCEEEEEecC-------------------
Confidence 566666666543 22222 23345667543322210
Q ss_pred ccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccccccc-----cccc
Q psy8733 222 YLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEFNY-----IPDS 296 (621)
Q Consensus 222 ~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~~p~-----i~~~ 296 (621)
...|. ++++++ + -.+++++++|. .+| .+|...|+ ++++
T Consensus 109 ----------~~~~~--~d~~~l---------------------~-~~i~~~~~~v~-~~n--~tG~~~~l~~i~~la~~ 151 (388)
T 1b9h_A 109 ----------AATYN--LDPEAV---------------------A-AAVTPRTKVIM-PVH--MAGLMADMDALAKISAD 151 (388)
T ss_dssp ----------TTTCC--BCHHHH---------------------H-HHCCTTEEEEC-CBC--GGGCCCCHHHHHHHHHH
T ss_pred ----------CCcCC--CCHHHH---------------------H-HhcCcCceEEE-EeC--CccCcCCHHHHHHHHHH
Confidence 00000 111221 0 12456788877 444 56998885 4567
Q ss_pred CCCcEEEecccccCCCc--ccccccc---eEEeccccccCCCccEEEEEchh-H--HhhhCCCCCceeeccccccCCCcc
Q psy8733 297 QGIPLVSDMSSNFLSRK--FDVSKFG---VIIAGAQKNIGPAGITVVIVRED-L--LEYALPITPTVFHFKINADNNSVY 368 (621)
Q Consensus 297 ~g~llvvDavSs~G~~p--IDv~~~g---vl~asaqK~lGP~Glg~livr~~-l--l~~~~~~~P~~ld~~~~~~~~s~~ 368 (621)
+|+++|+|++++.|..+ .++..++ +..+|.||++++...|+++.+++ + ++++......-.......-.....
T Consensus 152 ~~~~li~D~a~~~g~~~~~~~~~~~~~i~~~S~s~~K~l~g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (388)
T 1b9h_A 152 TGVPLLQDAAHAHGARWQGKRVGELDSIATFSFQNGKLMTAGEGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIA 231 (388)
T ss_dssp HTCCBCEECTTCTTCEETTEEGGGSSSCEEEECCTTSSSCSSSCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSC
T ss_pred cCCEEEEecchhcCCccCCeecccccceEEEEccCCCcccCCCeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecc
Confidence 89999999999998866 5666655 55666899996445688888876 5 454421100000000000001112
Q ss_pred C---CchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 369 N---TPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 369 ~---TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
+ +++...++++..++++ ++.+.++.+++++++++.|++++|+...
T Consensus 232 g~~~~~~~~~~a~~~~~~~~------l~~~~~~~~~~~~~l~~~L~~~~~~~~~ 279 (388)
T 1b9h_A 232 GSNMRLNEFSASVLRAQLAR------LDEQIAVRDERWTLLSRLLGAIDGVVPQ 279 (388)
T ss_dssp CCBCBCBHHHHHHHHHHHTT------HHHHHHHHHHHHHHHHHHHHTSTTCEEC
T ss_pred cccCCcCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHhccCCCcccc
Confidence 2 2555555554444443 4556677778889999999988766544
No 85
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.51 E-value=3.2e-13 Score=143.59 Aligned_cols=138 Identities=17% Similarity=0.189 Sum_probs=96.5
Q ss_pred CCCCceEEEEeccccccccccc---c-----ccccCCCcEEEecccccCC--------Ccccccc---cc--eEEecccc
Q psy8733 270 RDPEASYLYYCDNETVDGVEFN---Y-----IPDSQGIPLVSDMSSNFLS--------RKFDVSK---FG--VIIAGAQK 328 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p---~-----i~~~~g~llvvDavSs~G~--------~pIDv~~---~g--vl~asaqK 328 (621)
+++++++|.+++..|.||...| + +++++|+++|+|.+++.+. ...++.. .+ +++.|.+|
T Consensus 174 l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~i~~~s~sK 253 (416)
T 1bw0_A 174 KDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAK 253 (416)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSCCSCCEEEEEESTT
T ss_pred hccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHccCCCcEEEEecchh
Confidence 4567899999999999999988 2 3457899999999998732 2233432 22 66778899
Q ss_pred ccCCCc--cEEEEEchh--HHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q psy8733 329 NIGPAG--ITVVIVRED--LLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSV 404 (621)
Q Consensus 329 ~lGP~G--lg~livr~~--ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~ 404 (621)
++|.+| +|+++.+++ +.+++.. . ... ......++|....+++.++|+.+.+. +++++.++.+++.+
T Consensus 254 ~~~~~Glr~G~~~~~~~~~~~~~~~~---~---~~~---~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~ 323 (416)
T 1bw0_A 254 NLVVPGWRLGWLLYVDPHGNGPSFLE---G---LKR---VGMLVCGPCTVVQAALGEALLNTPQE-HLDQIVAKIEESAM 323 (416)
T ss_dssp TTSCGGGCCEEEEEECTTCSCHHHHH---H---HHH---HHHHHTCSCHHHHHHHHHHHHSSCHH-HHHHHHHHHHHHHH
T ss_pred hCCCCCceEEEEEeeCchhhHHHHHH---H---HHH---HhccccCCCcHHHHHHHHHHhcccHH-HHHHHHHHHHHHHH
Confidence 998788 799998774 4332210 0 000 01123567778888888887754333 58888899999999
Q ss_pred HHHHHHHccCCcc
Q psy8733 405 LLYQEIDNSDKFY 417 (621)
Q Consensus 405 ~L~e~L~~~~g~~ 417 (621)
++++.|++++|+.
T Consensus 324 ~l~~~L~~~~g~~ 336 (416)
T 1bw0_A 324 YLYNHIGECIGLA 336 (416)
T ss_dssp HHHHHHTTSTTEE
T ss_pred HHHHHHHhCCCCc
Confidence 9999998876554
No 86
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.51 E-value=3.7e-13 Score=140.59 Aligned_cols=249 Identities=10% Similarity=-0.017 Sum_probs=157.5
Q ss_pred CceeccCCC--CCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhC------CCCCCEEEEEcC
Q psy8733 51 PVINFGAGP--AKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLN------VPNNYKILFLQG 122 (621)
Q Consensus 51 ~~~lf~aGP--s~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~------~p~~yeI~f~~g 122 (621)
.++.|+.|. .+.|++|++++.+.+.+. ..+... . - .+.|+.++++++ ++.+ +|+|+ +
T Consensus 24 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~---------~~~y~~-~--~-~~lr~~la~~~~~~~~~~~~~~-~i~~t-~ 88 (377)
T 3fdb_A 24 GVLPLWVAESDFSTCPAVLQAITDAVQRE---------AFGYQP-D--G-SLLSQATAEFYADRYGYQARPE-WIFPI-P 88 (377)
T ss_dssp TSEECCSSCCCSCCCHHHHHHHHHHHHTT---------CCSSCC-S--S-CCHHHHHHHHHHHHHCCCCCGG-GEEEE-S
T ss_pred CeeeecccCCCCCCCHHHHHHHHHHHHcC---------CCCCCC-C--C-HHHHHHHHHHHHHHhCCCCCHH-HEEEe-C
Confidence 444555443 357899999999987541 011111 0 1 445666666665 5443 68876 6
Q ss_pred CcchhhhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeeccc
Q psy8733 123 GGTGMFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKV 202 (621)
Q Consensus 123 ggT~~~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~ 202 (621)
|||+ ++++ ++..+..+|+++.+..+++.+. ...++..|...+..+..
T Consensus 89 g~~~-----a~~~--------------------------~~~~~~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~~~~~ 135 (377)
T 3fdb_A 89 DVVR-----GLYI--------------------------AIDHFTPAQSKVIVPTPAYPPF--FHLLSATQREGIFIDAT 135 (377)
T ss_dssp CHHH-----HHHH--------------------------HHHHHSCTTCCEEEEESCCTHH--HHHHHHHTCCEEEEECT
T ss_pred ChHH-----HHHH--------------------------HHHHhcCCCCEEEEcCCCcHhH--HHHHHHcCCEEEEccCC
Confidence 7888 3333 3444556677777666665553 44566777643322210
Q ss_pred ccccccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecc
Q psy8733 203 SKYVSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDN 282 (621)
Q Consensus 203 ~~~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thn 282 (621)
+. +++|++ +. .+++++++|.+++.
T Consensus 136 --------------------------------~~--~d~~~l---------------------~~-~l~~~~~~v~i~~p 159 (377)
T 3fdb_A 136 --------------------------------GG--INLHDV---------------------EK-GFQAGARSILLCNP 159 (377)
T ss_dssp --------------------------------TS--CCHHHH---------------------HH-HHHTTCCEEEEESS
T ss_pred --------------------------------CC--CCHHHH---------------------HH-HhccCCCEEEEeCC
Confidence 00 222221 00 13346889999999
Q ss_pred cccccccccc--------ccccCCCcEEEeccccc----C-CCcccccc---cc--eEEeccccccCCCc--cEEEEE-c
Q psy8733 283 ETVDGVEFNY--------IPDSQGIPLVSDMSSNF----L-SRKFDVSK---FG--VIIAGAQKNIGPAG--ITVVIV-R 341 (621)
Q Consensus 283 ET~tGv~~p~--------i~~~~g~llvvDavSs~----G-~~pIDv~~---~g--vl~asaqK~lGP~G--lg~liv-r 341 (621)
.|.+|...|. +++++|+++|+|.+++. | ..+.++.. .+ +++.|.+|++|++| +|++++ +
T Consensus 160 ~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~ 239 (377)
T 3fdb_A 160 YNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN 239 (377)
T ss_dssp BTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC
Confidence 9999999873 34689999999999987 3 33445544 33 77889999998777 687776 6
Q ss_pred hhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc-cCCcc
Q psy8733 342 EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN-SDKFY 417 (621)
Q Consensus 342 ~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~-~~g~~ 417 (621)
+++.+.+... ......++|....+++.++++...+ .++.+.++.+++.+++++.|++ ++|+.
T Consensus 240 ~~~~~~~~~~------------~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 302 (377)
T 3fdb_A 240 PSDAEHWQQL------------SPVIKDGASTLGLIAAEAAYRYGTD--FLNQEVAYLKNNHDFLLHEIPKRIPGAK 302 (377)
T ss_dssp HHHHHHHHHS------------CHHHHCCCCHHHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHHHHHHSTTCE
T ss_pred HHHHHHHHHH------------HHhhcCCCCHHHHHHHHHHHhccHH--HHHHHHHHHHHHHHHHHHHHHhhCCCce
Confidence 7776654321 1112356777788887777775433 4788899999999999999988 56554
No 87
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.51 E-value=3.2e-13 Score=139.55 Aligned_cols=130 Identities=12% Similarity=0.051 Sum_probs=86.0
Q ss_pred CceEEEEecccccccccccc--------ccccCCCcEEEecccccC------CCcccc---cccceEEeccccccCCCcc
Q psy8733 273 EASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFL------SRKFDV---SKFGVIIAGAQKNIGPAGI 335 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G------~~pIDv---~~~gvl~asaqK~lGP~Gl 335 (621)
++++|.+++.. .+|...+. +++++|+++|+|.++..+ ..+..+ ...++++.|.||+.+|.|.
T Consensus 141 ~~~~v~~~~~~-~tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~g~~~G~ 219 (356)
T 1v72_A 141 QPACVSITQAT-EVGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMTWKAGVDALSFGATKNGVLAAE 219 (356)
T ss_dssp EEEEEEEESSC-TTSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTTGGGTCCEEEECCGGGTCSSCE
T ss_pred CceEEEEEcCC-CCCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhhhhhcCCEEEEecccCCCcCcc
Confidence 68999999854 48996552 346899999999988632 222222 1456888899999449899
Q ss_pred EEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCC
Q psy8733 336 TVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDK 415 (621)
Q Consensus 336 g~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g 415 (621)
|+++.++++++++.. +... .....++ ..+++..+++++.+. ..+.+.++.+++++++++.|++++|
T Consensus 220 g~~~~~~~~~~~~~~-------~~~~---~~~~~~~---~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~l~~~L~~~~g 285 (356)
T 1v72_A 220 AIVLFNTSLATEMSY-------RRKR---AGHLSSK---MRFLSAQIDAYLTDD-LWLRNARKANAAAQRLAQGLEGLGG 285 (356)
T ss_dssp EEEESSGGGHHHHHH-------HHHH---TTCCCSS---THHHHHHHHHHTSTT-HHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred EEEEECHHHHhhHHH-------Hhhc---cCchhhh---HHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 999999998876531 0000 0111122 223444456666542 4667778888899999999988765
Q ss_pred cc
Q psy8733 416 FY 417 (621)
Q Consensus 416 ~~ 417 (621)
+.
T Consensus 286 ~~ 287 (356)
T 1v72_A 286 VE 287 (356)
T ss_dssp EE
T ss_pred cE
Confidence 54
No 88
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.50 E-value=2.7e-13 Score=143.60 Aligned_cols=130 Identities=14% Similarity=0.154 Sum_probs=98.1
Q ss_pred CCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCC-----cccccccceEEecccccc-CCCccEEEEE
Q psy8733 272 PEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSR-----KFDVSKFGVIIAGAQKNI-GPAGITVVIV 340 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~-----pIDv~~~gvl~asaqK~l-GP~Glg~liv 340 (621)
+++++|.+++..+ |+..|+ +++++|+++|+|.+++.|.. +.++...|++++|.||++ ||.| |+++.
T Consensus 163 ~~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-G~~~~ 239 (417)
T 3n0l_A 163 EKPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFPYAHVVSSTTHKTLRGPRG-GIIMT 239 (417)
T ss_dssp HCCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTTTCSEEEEESSTTTCSCSC-EEEEE
T ss_pred cCCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccccceEEEeeCccccCCCCe-eEEEE
Confidence 4688898877554 888885 45688999999999876544 555555679999999999 5776 99999
Q ss_pred c-hhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcc
Q psy8733 341 R-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFY 417 (621)
Q Consensus 341 r-~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~ 417 (621)
+ +++.+++... ......++|+...+.++.++++...+. +++.+.++..++++++.+.|.+. |+.
T Consensus 240 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~~aa~~~a~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~ 304 (417)
T 3n0l_A 240 NDEELAKKINSA-----------IFPGIQGGPLMHVIAAKAVGFKFNLSD-EWKVYAKQVRTNAQVLANVLMDR-KFK 304 (417)
T ss_dssp SCHHHHHHHHHH-----------HTTTTCSSCCHHHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred CCHHHHHHHhhh-----------hCCcccCCcHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHHhC-Cce
Confidence 8 6776655220 112335678888888988888876555 68899999999999999999884 343
No 89
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.50 E-value=8.9e-14 Score=146.83 Aligned_cols=129 Identities=14% Similarity=0.148 Sum_probs=95.7
Q ss_pred CceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCcccc-----cccceEEecccccc-CCCccEEEEEc
Q psy8733 273 EASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDV-----SKFGVIIAGAQKNI-GPAGITVVIVR 341 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv-----~~~gvl~asaqK~l-GP~Glg~livr 341 (621)
++++|.+++..+ |...|+ +++++|+++|+|.+++.|..+.+. +..++++.|.||++ ||.| |+++.+
T Consensus 163 ~~~~v~~~~p~~--~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-G~~~~~ 239 (407)
T 2dkj_A 163 RPKVIVAGASAY--PRFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLRGPRG-GLILSN 239 (407)
T ss_dssp CCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTTTCSEEEEESSGGGCCCSC-EEEEES
T ss_pred CCeEEEEecccc--CCCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccccccEEEEeccccCCCCCc-eEEEEC
Confidence 678888844333 566664 456789999999999874433222 22458899999999 5887 999999
Q ss_pred -hhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcc
Q psy8733 342 -EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFY 417 (621)
Q Consensus 342 -~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~ 417 (621)
+++.+++.+.. .....+|++...+.++.++++++.+. +++++.++.+++++++++.|+++ |+.
T Consensus 240 ~~~~~~~l~~~~-----------~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~ 303 (407)
T 2dkj_A 240 DPELGKRIDKLI-----------FPGIQGGPLEHVIAGKAVAFFEALQP-EFKEYSRLVVENAKRLAEELARR-GYR 303 (407)
T ss_dssp CHHHHHHHHHHH-----------TTTTCSSCCHHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHHT-TCE
T ss_pred CHHHHHHHHhhh-----------cccccCCCcHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHhC-Cce
Confidence 78877653210 12234678888888888999998666 78999999999999999999987 454
No 90
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.49 E-value=2.2e-12 Score=137.35 Aligned_cols=129 Identities=12% Similarity=0.047 Sum_probs=94.0
Q ss_pred CCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC----cccccc----cc--eEEeccccccCC
Q psy8733 271 DPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR----KFDVSK----FG--VIIAGAQKNIGP 332 (621)
Q Consensus 271 ~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~----pIDv~~----~g--vl~asaqK~lGP 332 (621)
++++++|.+++..|.||...+. +++++|+++|+|.+++.+.. +.++.. .+ +++.|.+|++|+
T Consensus 170 ~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 249 (412)
T 2x5d_A 170 IPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNM 249 (412)
T ss_dssp ESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSC
T ss_pred ccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCC
Confidence 3578999999999999998873 34578999999999998642 233332 24 889999999998
Q ss_pred Cc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Q psy8733 333 AG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEI 410 (621)
Q Consensus 333 ~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L 410 (621)
+| +|+++.++++++++... . .....+++....+++.++|+... . .++.+.++.+++.+++++.|
T Consensus 250 ~G~r~G~~~~~~~~~~~l~~~-------~-----~~~~~~~~~~~~~a~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~L 315 (412)
T 2x5d_A 250 AGWRIGFMVGNPELVSALARI-------K-----SYHDYGTFTPLQVAAIAALEGDQ-Q-CVRDIARQYQQRRDVLVKGL 315 (412)
T ss_dssp TTSCCEEEEECHHHHHHHHHH-------H-----HHHCCCCCHHHHHHHHHHHHSCS-H-HHHHHHHHHHHHHHHHHHHH
T ss_pred cccceEEEEcCHHHHHHHHHH-------H-----hhhccCCCHHHHHHHHHHHhCCH-H-HHHHHHHHHHHHHHHHHHHH
Confidence 88 69999999988765320 0 11124566667777666665432 2 47888889999999999999
Q ss_pred Hcc
Q psy8733 411 DNS 413 (621)
Q Consensus 411 ~~~ 413 (621)
+++
T Consensus 316 ~~~ 318 (412)
T 2x5d_A 316 REA 318 (412)
T ss_dssp HHH
T ss_pred HHC
Confidence 886
No 91
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.49 E-value=2.9e-12 Score=134.79 Aligned_cols=134 Identities=13% Similarity=0.152 Sum_probs=93.2
Q ss_pred CCCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC----c---ccccc--c--ceEEecccccc
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR----K---FDVSK--F--GVIIAGAQKNI 330 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~----p---IDv~~--~--gvl~asaqK~l 330 (621)
+++++++|.+++..|.||...|. +++++|+++|+|.+++.+.. + ..++. + ++++.|.+|++
T Consensus 160 l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~~ 239 (388)
T 1j32_A 160 ITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTY 239 (388)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTTT
T ss_pred cCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhcc
Confidence 45679999999999999998762 34578999999999876432 1 12221 3 38899999999
Q ss_pred CCCc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Q psy8733 331 GPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQ 408 (621)
Q Consensus 331 GP~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e 408 (621)
|++| +|+++.++++.+++.+. .....+++++ ...+++.++|+.. +. .++.+.++.+++.+++++
T Consensus 240 ~~~G~r~G~~~~~~~~~~~l~~~-----------~~~~~~~~~~-~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~~l~~ 305 (388)
T 1j32_A 240 AMTGWRVGFLAGPVPLVKAATKI-----------QGHSTSNVCT-FAQYGAIAAYENS-QD-CVQEMLAAFAERRRYMLD 305 (388)
T ss_dssp TCTTTCCEEEECCHHHHHHHHHH-----------HHTTTCSCCH-HHHHHHHHHHHSC-SH-HHHHHHHHHHHHHHHHHH
T ss_pred CCcccceEEEEeCHHHHHHHHHH-----------HhhcccCCCH-HHHHHHHHHHhCC-cH-HHHHHHHHHHHHHHHHHH
Confidence 9999 99999999987765320 0122344443 3334444444421 11 377888899999999999
Q ss_pred HHHccCCcc
Q psy8733 409 EIDNSDKFY 417 (621)
Q Consensus 409 ~L~~~~g~~ 417 (621)
.|++++|+.
T Consensus 306 ~L~~~~g~~ 314 (388)
T 1j32_A 306 ALNAMPGLE 314 (388)
T ss_dssp HHHTCTTCB
T ss_pred HHhhCCCCc
Confidence 999876554
No 92
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.49 E-value=1.6e-14 Score=155.06 Aligned_cols=103 Identities=57% Similarity=0.950 Sum_probs=96.4
Q ss_pred HHHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 449 FGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
+|++++|+||++||.|++++++|++++++..+..|.+++|.....++++++|||++.||.++..|+|+++.||+++++++
T Consensus 198 ~~~~~~s~~K~~gp~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~ 277 (377)
T 3e77_A 198 FGVIFAGAQKNVGSAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKL 277 (377)
T ss_dssp CSEEEEEGGGTTSCTTCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred cCEEEEecccccCCCccEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHH
Confidence 56789999999999999999999999999888899999999888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCcccccC
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPV 551 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v 551 (621)
.+++++.+|+.|++.++|+..++
T Consensus 278 ~~~l~~~l~~~L~~~~g~~~~~~ 300 (377)
T 3e77_A 278 SSIKSQTIYEIIDNSQGFYVCPV 300 (377)
T ss_dssp HHHHHHHHHHHHHTSTTSEECCS
T ss_pred HHHHHHHHHHHHHhcCCceecCC
Confidence 99999999999999888775553
No 93
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.48 E-value=2e-12 Score=133.30 Aligned_cols=126 Identities=10% Similarity=0.078 Sum_probs=87.8
Q ss_pred CCCCceEEEEecccccccccccc-----cccc-CCCcEEEecccccCCCcccccccc--eEEeccccccC-CCc--cEEE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDS-QGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIG-PAG--ITVV 338 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~-~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lG-P~G--lg~l 338 (621)
+++++++|.+++..|.+|...|+ ++++ +|+++|+|.+++.|..+.++ +++ +++.|.||++| |.| .|++
T Consensus 80 i~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~-~~~~d~~~~s~~K~~~~~~~r~~G~~ 158 (331)
T 1pff_A 80 LKPNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPL-DLGVDIVVHSATKYINGHTDVVAGLV 158 (331)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGG-GGTCSEEEEETTTTTSSSSSCCCEEE
T ss_pred hcCCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChh-hcCCcEEEEECccccCCCCCceEEEE
Confidence 45689999999999999999985 4578 99999999999988754444 344 89999999997 666 7999
Q ss_pred EEch-hHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 339 IVRE-DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 339 ivr~-~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
+.++ ++.+++.+....+ ...+++....+++..+++++... .+. ..+..+.+.+.+++.
T Consensus 159 ~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~--~~~----~~~~~~~~~~~l~~~ 217 (331)
T 1pff_A 159 CSRADIIAKVKSQGIKDI-----------TGAIISPHDAWLITRGTLTLDMR--VKR----AAENAQKVAEFLHEH 217 (331)
T ss_dssp EECHHHHHHHHHTCCCCC-----------CCCCCCHHHHHHHHHHHHHHHHH--HHH----HHHHHHHHHHHHHHC
T ss_pred EeCcHHHHHHHHHHHHhh-----------cCCCCCHHHHHHHHcCcchHHHH--HHH----HHHHHHHHHHHHHcC
Confidence 9998 8877764422110 11355666666666777765432 333 333444455555544
No 94
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.48 E-value=3.7e-12 Score=136.01 Aligned_cols=263 Identities=9% Similarity=0.069 Sum_probs=144.2
Q ss_pred CCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHHHHHHh
Q psy8733 57 AGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAVAMNLI 136 (621)
Q Consensus 57 aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~alNll 136 (621)
|...++|++|++++.+.+.+.. .+.. .+. ....++.++.++.+++++|++ +++|+ ++||+ +++++
T Consensus 9 p~~~~~~~~~~~a~~~~~~~~~-~~~~----~~~-~g~~~l~~~l~~~la~~~g~~---~~i~~-~~gt~-----al~~~ 73 (418)
T 2c81_A 9 PEWPQHSDRTRRKIEEVFQSNR-WAIS----GYW-TGEESMERKFAKAFADFNGVP---YCVPT-TSGST-----ALMLA 73 (418)
T ss_dssp CCSSCCCHHHHHHHHHHHHHTC-CSTT----SBC-CSSCCHHHHHHHHHHHHHTCS---EEEEE-SCHHH-----HHHHH
T ss_pred CCCCCCCHHHHHHHHHHHhcCC-cccc----Ccc-cCCHHHHHHHHHHHHHHhCCC---cEEEe-CCHHH-----HHHHH
Confidence 4455678999999999886531 1100 111 001345788999999999986 36666 56788 56665
Q ss_pred hhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCCCCCCCC
Q psy8733 137 SSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNR 216 (621)
Q Consensus 137 a~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~~ 216 (621)
...+++++||+|++... ++.+. ...++..|...+..+..
T Consensus 74 ~~~~~~~~gd~Vl~~~~-------------------------~~~~~--~~~~~~~g~~~~~~~~~-------------- 112 (418)
T 2c81_A 74 LEALGIGEGDEVIVPSL-------------------------TWIAT--ATAVLNVNALPVFVDVE-------------- 112 (418)
T ss_dssp HHHTTCCTTCEEEEESS-------------------------SCTHH--HHHHHHTTCEEEEECBC--------------
T ss_pred HHHcCCCCcCEEEECCC-------------------------ccHhH--HHHHHHcCCEEEEEecC--------------
Confidence 55555566666666543 22222 22344566543322210
Q ss_pred CCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccccccc----
Q psy8733 217 DPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEFNY---- 292 (621)
Q Consensus 217 ~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~~p~---- 292 (621)
...|. ++++++ + -.+++++++|.++| .+|...++
T Consensus 113 ---------------~~~~~--~d~~~l---------------------~-~~i~~~~~~v~~~~---~~G~~~~~~~i~ 150 (418)
T 2c81_A 113 ---------------ADTYC--IDPQLI---------------------K-SAITDKTKAIIPVH---LFGSMANMDEIN 150 (418)
T ss_dssp ---------------TTTCS--BCHHHH---------------------G-GGCCTTEEEECCBC---CTTCCCCHHHHH
T ss_pred ---------------CCCCC--cCHHHH---------------------H-HhhCCCCeEEEEeC---CcCCcccHHHHH
Confidence 00000 112221 1 12456788888764 67988775
Q ss_pred -ccccCCCcEEEecccccCCCccc---cccc---ceEEeccccccCCCccEEEEEc-hhHHhhhCCCCCceeecccc-cc
Q psy8733 293 -IPDSQGIPLVSDMSSNFLSRKFD---VSKF---GVIIAGAQKNIGPAGITVVIVR-EDLLEYALPITPTVFHFKIN-AD 363 (621)
Q Consensus 293 -i~~~~g~llvvDavSs~G~~pID---v~~~---gvl~asaqK~lGP~Glg~livr-~~ll~~~~~~~P~~ld~~~~-~~ 363 (621)
+++++|+++|+|.+++.+.. ++ +..+ ++..+++||++|+...|+++.+ +++.+++.+........... ..
T Consensus 151 ~~~~~~~~~li~D~a~~~~~~-~~~~~~~~~~~~~~~s~s~~K~~~~g~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 229 (418)
T 2c81_A 151 EIAQEHNLFVIEDCAQSHGSV-WNNQRAGTIGDIGAFSCQQGKVLTAGEGGIIVTKNPRLFELIQQLRADSRVYCDDSSE 229 (418)
T ss_dssp HHHHHTTCEEEEECTTCTTCE-ETTEETTSSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHHBTTEEECSCGGG
T ss_pred HHHHHCCCEEEEECcccccCc-cCCEecccccceEEEeccCCcccCCCCeEEEEECCHHHHHHHHHHHHhCccccccccc
Confidence 45689999999999999874 22 2222 2445566999987345677774 67766654311000000000 00
Q ss_pred CCCcc----CCchHHH----HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 364 NNSVY----NTPPTFV----VHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 364 ~~s~~----~TP~v~~----I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
....+ +|+.+.+ +-.+.+++...... +++.+.++.+++++++++.|.+++|+...
T Consensus 230 ~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~ 292 (418)
T 2c81_A 230 LMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQ-ELDDKNAIREKNAMFLNDALSKIDGIKVM 292 (418)
T ss_dssp CCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHTTSTTEEEC
T ss_pred cccchhhccccccccCcCCCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCcccC
Confidence 00001 0111110 00112222222223 57888888899999999999988766543
No 95
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.48 E-value=6.8e-13 Score=140.63 Aligned_cols=128 Identities=16% Similarity=0.161 Sum_probs=89.0
Q ss_pred CCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCC-----cccccccceEEecccccc-CCCccEEEEE
Q psy8733 272 PEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSR-----KFDVSKFGVIIAGAQKNI-GPAGITVVIV 340 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~-----pIDv~~~gvl~asaqK~l-GP~Glg~liv 340 (621)
+++++|++++..+ |...++ +++++|+++|+|.+|+.|.. +-.+...|+++.|.||++ ||.| |+++.
T Consensus 171 ~~~~~v~~~~~~~--~~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~di~~~s~sK~l~g~~~-g~~~~ 247 (425)
T 3ecd_A 171 HKPSLIIAGFSAY--PRKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHAHVVTSTTHKTLRGPRG-GFVLT 247 (425)
T ss_dssp HCCSEEEEECSCC--CSCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSGGGCCCSC-EEEEE
T ss_pred cCCcEEEEccccC--CCcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcCcEEEecCCcccCCCCc-EEEEe
Confidence 4688999885444 666554 45688999999999865543 222334579999999999 5765 88888
Q ss_pred ch-hHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 341 RE-DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 341 r~-~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
++ ++.+.+.+ .......++|+...+.++..++..+.+. +++.+.++.+++.+++++.|.+.+
T Consensus 248 ~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~a~~~a~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g 310 (425)
T 3ecd_A 248 NDEEIAKKINS-----------AVFPGLQGGPLMHVIAGKAVAFGEALTD-DFKTYIDRVLANAQALGDVLKAGG 310 (425)
T ss_dssp SCHHHHHHHHH-----------HHC-----CCCHHHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHh-----------hhCccccCCccHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhCC
Confidence 84 55544321 0112233577788888888888776555 688999999999999999998853
No 96
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.48 E-value=2.8e-12 Score=135.47 Aligned_cols=133 Identities=14% Similarity=0.173 Sum_probs=94.8
Q ss_pred CCCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC---ccccccc--c--eEEeccccccCCCc
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR---KFDVSKF--G--VIIAGAQKNIGPAG 334 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~---pIDv~~~--g--vl~asaqK~lGP~G 334 (621)
+++++++|.+|+.+|+||..++. +++++|+++|+|.+++-+.. ..++..+ + +++.|.+|++|++|
T Consensus 161 l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G 240 (385)
T 1b5p_A 161 ITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSPGRVAPEHTLTVNGAAKAFAMTG 240 (385)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCGGGTCTTTEEEEEESTTTTTCGG
T ss_pred cCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCHHHcCCCCEEEEEechhhcCCcc
Confidence 45678999999999999998772 34578999999999886543 2334433 4 77888899999889
Q ss_pred --cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHH---HHhhCCHHHHHHHHHHHHHHHHHH
Q psy8733 335 --ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAW---IKRQGGLAKMEQNSLQKSVLLYQE 409 (621)
Q Consensus 335 --lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~---i~~~gGl~~i~~r~~~la~~L~e~ 409 (621)
+|+++.++++++++.+. . .... .+++.....++.++|+. ..+ .++++.++.+++.+++++.
T Consensus 241 ~RiG~~~~~~~~~~~l~~~-------~----~~~~-~~~~~~~~~a~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~ 306 (385)
T 1b5p_A 241 WRIGYACGPKEVIKAMASV-------S----RQST-TSPDTIAQWATLEALTNQEASRA--FVEMAREAYRRRRDLLLEG 306 (385)
T ss_dssp GCCEEEECCHHHHHHHHHH-------H----HTTT-CSCCHHHHHHHHHHHHCHHHHHH--HHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEeCHHHHHHHHHH-------H----hhcc-CCCCHHHHHHHHHHHhCCCcchH--HHHHHHHHHHHHHHHHHHH
Confidence 89999999887765320 0 0112 23445555566666653 222 3778888889999999999
Q ss_pred HHccCCcc
Q psy8733 410 IDNSDKFY 417 (621)
Q Consensus 410 L~~~~g~~ 417 (621)
|+++ |+.
T Consensus 307 L~~~-g~~ 313 (385)
T 1b5p_A 307 LTAL-GLK 313 (385)
T ss_dssp HHHH-TCC
T ss_pred HHHC-CCe
Confidence 9887 453
No 97
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.48 E-value=2.5e-12 Score=136.62 Aligned_cols=132 Identities=14% Similarity=0.102 Sum_probs=92.8
Q ss_pred CCceEEEEecccccccccccc--------ccccCCCcEEEecccc-cC---CCccccccc----c--eEEeccccccCCC
Q psy8733 272 PEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSN-FL---SRKFDVSKF----G--VIIAGAQKNIGPA 333 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs-~G---~~pIDv~~~----g--vl~asaqK~lGP~ 333 (621)
+++++|++++..|.||...|. +++++|+++|+|.+++ ++ ..+.++..+ + +++.|.+|++|++
T Consensus 162 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 241 (400)
T 3asa_A 162 THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFA 241 (400)
T ss_dssp CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTT
T ss_pred cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCc
Confidence 578999999999999999873 3457899999999998 53 334455332 3 7789999999988
Q ss_pred c--cEEEEEchhHHhhhCCCCCceeecccc--ccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Q psy8733 334 G--ITVVIVREDLLEYALPITPTVFHFKIN--ADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQE 409 (621)
Q Consensus 334 G--lg~livr~~ll~~~~~~~P~~ld~~~~--~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~ 409 (621)
| +|++++++++.+... .+.... ......++|+|.....++.++|+.. .++.+.++.+++.+++++.
T Consensus 242 GlriG~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~~l~~~ 311 (400)
T 3asa_A 242 GIRLGWTVIPQELTYADG------HFVIQDWERFLSTTFNGASIPAQEAGVAGLSIL----PQLEAIHYYRENSDLLRKA 311 (400)
T ss_dssp TCCCEEEECCTTCBCTTS------CBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT----TTCHHHHHHHHHHHHHHHH
T ss_pred chheeEEeeChhhccchh------hhHHHHHHHHhccCccCCChHHHHHHHHHhCcH----HHHHHHHHHHHHHHHHHHH
Confidence 8 699999988731110 000000 0011234577777777766666532 4778888999999999999
Q ss_pred HHcc
Q psy8733 410 IDNS 413 (621)
Q Consensus 410 L~~~ 413 (621)
|++.
T Consensus 312 L~~~ 315 (400)
T 3asa_A 312 LLAT 315 (400)
T ss_dssp HHHT
T ss_pred HHHC
Confidence 9886
No 98
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.47 E-value=3.5e-12 Score=134.10 Aligned_cols=250 Identities=14% Similarity=0.121 Sum_probs=144.3
Q ss_pred eeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhhhHHH
Q psy8733 53 INFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMFAAVA 132 (621)
Q Consensus 53 ~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~~a~a 132 (621)
+.|+. |. +|++|++++.+.+.+... . . ...+.+.|+.++++++.+ +++|+ +|||+ +
T Consensus 11 i~~~~-p~-~~~~~~~a~~~~~~~~~~--------~-~----~~~~~~l~~~la~~~~~~---~~~~~-~~gt~-----a 66 (393)
T 1mdo_A 11 LPFSR-PA-MGAEELAAVKTVLDSGWI--------T-T----GPKNQELEAAFCRLTGNQ---YAVAV-SSATA-----G 66 (393)
T ss_dssp BCSCC-CC-CCHHHHHHHHHHHHHTCC--------S-S----SHHHHHHHHHHHHHHCCS---EEEEE-SCHHH-----H
T ss_pred cccCC-CC-CCHHHHHHHHHHHhcCCc--------C-C----ChHHHHHHHHHHHHhCCC---cEEEe-cChHH-----H
Confidence 34443 54 788999999988754210 1 1 246788999999999985 57876 67888 5
Q ss_pred HHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCCCC
Q psy8733 133 MNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQS 212 (621)
Q Consensus 133 lNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~ 212 (621)
++++...+++++||+|++... ++.+. ...++..|...+..+..
T Consensus 67 l~~~~~~~~~~~gd~Vl~~~~-------------------------~~~~~--~~~~~~~g~~~~~v~~~---------- 109 (393)
T 1mdo_A 67 MHIALMALGIGEGDEVITPSM-------------------------TWVST--LNMIVLLGANPVMVDVD---------- 109 (393)
T ss_dssp HHHHHHHTTCCTTCEEEEESS-------------------------SCHHH--HHHHHHTTCEEEEECBC----------
T ss_pred HHHHHHHcCCCCCCEEEeCCC-------------------------ccHhH--HHHHHHCCCEEEEEecc----------
Confidence 555554455556666665543 33322 23445566543322210
Q ss_pred CCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccccccc
Q psy8733 213 TWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEFNY 292 (621)
Q Consensus 213 ~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv~~p~ 292 (621)
+ ++ | .++++++ + -.+++++++|.+++ ++|...|+
T Consensus 110 ~--~~-----------------~--~~d~~~l---------------------~-~~l~~~~~~v~~~~---~~G~~~~~ 143 (393)
T 1mdo_A 110 R--DT-----------------L--MVTPEHI---------------------E-AAITPQTKAIIPVH---YAGAPADL 143 (393)
T ss_dssp T--TT-----------------C--CBCHHHH---------------------H-HHCCTTEEEECCBC---GGGCCCCH
T ss_pred C--Cc-----------------C--CCCHHHH---------------------H-HhcCCCceEEEEeC---CCCCcCCH
Confidence 0 00 0 0111221 0 12445788888875 68998875
Q ss_pred -----ccccCCCcEEEecccccCCCcccccc---cceEEeccc--cccCCCccEEEEEc-hhHHhhhCCCCC-ce-ee-c
Q psy8733 293 -----IPDSQGIPLVSDMSSNFLSRKFDVSK---FGVIIAGAQ--KNIGPAGITVVIVR-EDLLEYALPITP-TV-FH-F 358 (621)
Q Consensus 293 -----i~~~~g~llvvDavSs~G~~pIDv~~---~gvl~asaq--K~lGP~Glg~livr-~~ll~~~~~~~P-~~-ld-~ 358 (621)
+++++|+++|+|.+++.|..+ +... .+++++|.| |++++...|+++.+ +++++++.+... .. .+ +
T Consensus 144 ~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~~~~d~~~~S~~k~K~l~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~ 222 (393)
T 1mdo_A 144 DAIYALGERYGIPVIEDAAHATGTSY-KGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLGVDAW 222 (393)
T ss_dssp HHHHHHHHHHTCCBCEECTTCTTCEE-TTEETTSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTEECC--
T ss_pred HHHHHHHHHcCCeEEEECccccCCeE-CCeecCCCCeEEEeCCCCCccccccceEEEeCCHHHHHHHHHHHhcCCcccch
Confidence 456789999999999987643 1111 458888988 99975556788876 677776543111 00 00 0
Q ss_pred ccc-ccCCC-----ccC----CchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCccc
Q psy8733 359 KIN-ADNNS-----VYN----TPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYE 418 (621)
Q Consensus 359 ~~~-~~~~s-----~~~----TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~ 418 (621)
... ..... +.+ .+++...++ +.++. +++++.++.+++++++++.|.+++ +..
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~----~~~l~---~~~~~~~~~~~~~~~l~~~L~~~~-~~~ 284 (393)
T 1mdo_A 223 DRQSGGRAPQAEVLAPGYKYNLPDLNAAIA----LAQLQ---KLDALNARRAAIAAQYHQAMADLP-FQP 284 (393)
T ss_dssp ---------CCEESSCCCBCCCCHHHHHHH----HHHHH---THHHHHHHHHHHHHHHHHHHHTSS-CEE
T ss_pred hhhcccccccccccccCccCCCCHHHHHHH----HHHHH---HHHHHHHHHHHHHHHHHHHHhcCC-ccc
Confidence 000 00000 112 233333322 22332 477888888889999999999876 543
No 99
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.47 E-value=6.2e-13 Score=142.37 Aligned_cols=260 Identities=14% Similarity=0.102 Sum_probs=160.7
Q ss_pred CceeccCCC--CCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCcchh
Q psy8733 51 PVINFGAGP--AKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVP-NNYKILFLQGGGTGM 127 (621)
Q Consensus 51 ~~~lf~aGP--s~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p-~~yeI~f~~gggT~~ 127 (621)
.++.|..|- -+.|++|++++.+.+.+. ..+. ... ..+..+++++.+++.++.+ +..+|+|+ +|+|++
T Consensus 62 ~~i~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y-----~~~---~~~l~~~l~~~l~~~~g~~~~~~~v~~~-~g~~ea 131 (421)
T 3l8a_A 62 ELLQMWVADMDFLPVPEIKEAIINYGREH-IFGY-----NYF---NDDLYQAVIDWERKEHDYAVVKEDILFI-DGVVPA 131 (421)
T ss_dssp TCEECCSSCCCSCCCHHHHHHHHHHHHHC-CSSC-----BCC---CHHHHHHHHHHHHHHHCCCCCGGGEEEE-SCHHHH
T ss_pred CeeecccCCCCCCCCHHHHHHHHHHHhcC-CcCC-----CCC---CHHHHHHHHHHHHHHhCCCCCHHHEEEc-CCHHHH
Confidence 444555443 246899999999987531 1110 111 1466778888889998842 12368776 678883
Q ss_pred hhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccc
Q psy8733 128 FAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVS 207 (621)
Q Consensus 128 ~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~ 207 (621)
+++ ++..+..+|+++.+..+++.+ +...++..|...+..+..
T Consensus 132 ~~~-------------------------------a~~~~~~~gd~Vi~~~~~y~~--~~~~~~~~g~~~~~~~~~----- 173 (421)
T 3l8a_A 132 ISI-------------------------------ALQAFSEKGDAVLINSPVYYP--FARTIRLNDHRLVENSLQ----- 173 (421)
T ss_dssp HHH-------------------------------HHHHHSCTEEEEEEEESCCHH--HHHHHHHTTEEEEEEECE-----
T ss_pred HHH-------------------------------HHHHhcCCCCEEEECCCCcHH--HHHHHHHCCCEEEecccc-----
Confidence 332 333444555665555555544 334555666432222100
Q ss_pred cCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCC-CCceEEEEecccccc
Q psy8733 208 IPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRD-PEASYLYYCDNETVD 286 (621)
Q Consensus 208 ~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~-~~t~~V~~thnET~t 286 (621)
.-++.|. ++.|++ ++ .+. +++++|.+++..+.+
T Consensus 174 ----------------------~~~~~~~--~d~~~l---------------------e~-~i~~~~~~~vil~~p~npt 207 (421)
T 3l8a_A 174 ----------------------IINGRFE--IDFEQL---------------------EK-DIIDNNVKIYLLCSPHNPG 207 (421)
T ss_dssp ----------------------EETTEEE--CCHHHH---------------------HH-HHHHTTEEEEEEESSBTTT
T ss_pred ----------------------ccCCCee--eCHHHH---------------------HH-HhhccCCeEEEECCCCCCC
Confidence 0000110 112221 11 133 679999999999999
Q ss_pred cccccc--------ccccCCCcEEEecccccCC----Ccccccc-----cc--eEEeccccccCCCcc--EEEEEc-hhH
Q psy8733 287 GVEFNY--------IPDSQGIPLVSDMSSNFLS----RKFDVSK-----FG--VIIAGAQKNIGPAGI--TVVIVR-EDL 344 (621)
Q Consensus 287 Gv~~p~--------i~~~~g~llvvDavSs~G~----~pIDv~~-----~g--vl~asaqK~lGP~Gl--g~livr-~~l 344 (621)
|...+. +++++|+++|+|.+++.+. ....+.. .+ +.+.|.+|++|++|+ |+++++ +++
T Consensus 208 G~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~~l 287 (421)
T 3l8a_A 208 GRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNESL 287 (421)
T ss_dssp TBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSHHH
T ss_pred CCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCHHH
Confidence 988652 3567899999999987632 2222222 23 788999999997775 999998 777
Q ss_pred HhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcc
Q psy8733 345 LEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFY 417 (621)
Q Consensus 345 l~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~ 417 (621)
.+.+.+. .....++++|..+++++.++++...+ .++++.++.+++.+++++.|++.+++.
T Consensus 288 ~~~~~~~-----------~~~~~~~~~n~~~~~a~~aal~~~~~--~~~~~~~~~~~~~~~l~~~L~~~~~i~ 347 (421)
T 3l8a_A 288 RRKFQYR-----------QLANNQHEVPTVGMIATQAAFQYGKP--WLEELKTVIEGNIKLVIKELEAKTKIK 347 (421)
T ss_dssp HHHHHHH-----------HHHTTCSCCCHHHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHHHHHHCSCE
T ss_pred HHHHHHH-----------HHhcccCCCCHHHHHHHHHHHhccHH--HHHHHHHHHHHHHHHHHHHHHhCCCce
Confidence 6654210 01123567888899998888886433 478889999999999999998865443
No 100
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.47 E-value=4.6e-12 Score=131.57 Aligned_cols=240 Identities=13% Similarity=0.155 Sum_probs=146.8
Q ss_pred CceeccCC--CCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhh
Q psy8733 51 PVINFGAG--PAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMF 128 (621)
Q Consensus 51 ~~~lf~aG--Ps~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~ 128 (621)
.++.|+.| |.+.|++|++++.+.+..+...+ . . ...+.|+.++++++++.+ +|+|+ +|+|+
T Consensus 16 ~~id~~~~~~~~~~~~~v~~a~~~~~~~~~~y~-------~--~----~~~~lr~~la~~~~~~~~-~i~~t-~g~~~-- 78 (350)
T 3fkd_A 16 EIVNFSTTVWTDGDKDHLEKHLVENLNCIRHYP-------E--P----DAGTLRQMLAKRNSVDNN-AILVT-NGPTA-- 78 (350)
T ss_dssp CCEECSCCSCCCSCCHHHHHHHHHTGGGGGSCC-------C--T----TCHHHHHHHHHHTTCCGG-GEEEE-SHHHH--
T ss_pred cEEEccCCCCCCCCCHHHHHHHHHhHhHHhcCC-------C--C----cHHHHHHHHHHHhCcCHH-HEEEc-CCHHH--
Confidence 45555555 45678999999998774332211 1 1 124689999999998654 68887 67888
Q ss_pred hHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeeccccccccc
Q psy8733 129 AAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSI 208 (621)
Q Consensus 129 ~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~ 208 (621)
+++++... +. ||++.+..+++.+ +...++..|...+..+..
T Consensus 79 ---al~~~~~~--------------------------l~--gd~Vi~~~p~~~~--~~~~~~~~g~~~~~v~~~------ 119 (350)
T 3fkd_A 79 ---AFYQIAQA--------------------------FR--GSRSLIAIPSFAE--YEDACRMYEHEVCFYPSN------ 119 (350)
T ss_dssp ---HHHHHHHH--------------------------TT--TCEEEEEESCCHH--HHHHHHHTTCEEEEEETT------
T ss_pred ---HHHHHHHH--------------------------HC--CCEEEEeCCCcHH--HHHHHHHcCCeEEEEecC------
Confidence 45543332 22 4444444444443 234566667543222100
Q ss_pred CCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccc
Q psy8733 209 PDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGV 288 (621)
Q Consensus 209 ~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv 288 (621)
++.+.+.. +++++|.+++..|.||.
T Consensus 120 ------------------------------------------------------~~~~~~~~-~~~~~v~i~~p~nptG~ 144 (350)
T 3fkd_A 120 ------------------------------------------------------EDIGEADF-SNMDFCWLCNPNNPDGR 144 (350)
T ss_dssp ------------------------------------------------------SCGGGSCC-TTCSEEEEESSCTTTCC
T ss_pred ------------------------------------------------------CccccCcc-CCCCEEEEeCCCCCcCC
Confidence 00011111 57899999999999999
Q ss_pred cccc-----ccccC-CCcEEEecccccCCCc-----ccccccc--eEEeccccccCCCc--cEEEEEchhHHhhhCCCCC
Q psy8733 289 EFNY-----IPDSQ-GIPLVSDMSSNFLSRK-----FDVSKFG--VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITP 353 (621)
Q Consensus 289 ~~p~-----i~~~~-g~llvvDavSs~G~~p-----IDv~~~g--vl~asaqK~lGP~G--lg~livr~~ll~~~~~~~P 353 (621)
..|. +.+.. ..++|+|.+++..... ..++.++ +++.|.+|++|++| +|+++.++++.+++....
T Consensus 145 ~~~~~~l~~l~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~- 223 (350)
T 3fkd_A 145 LLQRTEILRLLNDHPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAFS- 223 (350)
T ss_dssp CCCHHHHHHHHHHCTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCHHHHHHHHTTC-
T ss_pred CCCHHHHHHHHHhCCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhccCcchheEeEEeCHHHHHHHHHhC-
Confidence 9985 33322 3599999998754322 2333444 77889999999666 799999999887764311
Q ss_pred ceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCccc
Q psy8733 354 TVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYE 418 (621)
Q Consensus 354 ~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~ 418 (621)
...+++.....++.++|+...+. .+.+.+.. ++.+++++.|++++|+..
T Consensus 224 -------------~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~-~~~~~l~~~L~~~~~~~~ 272 (350)
T 3fkd_A 224 -------------TPWAVNALAIEAAKFILIHPAQF--TLPIRKWQ-RNTVDFITALNRLDGVEV 272 (350)
T ss_dssp -------------CTTCSCHHHHHHHHHHHHCTTTT--CCCHHHHH-HHHHHHHHHHHHSTTEEE
T ss_pred -------------CCCCCCHHHHHHHHHHHhCHHHH--HHHHHHHH-HHHHHHHHHHhcCCCcEE
Confidence 13466666766666665532111 23333333 778889999988765543
No 101
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.47 E-value=1.8e-12 Score=136.51 Aligned_cols=130 Identities=8% Similarity=0.023 Sum_probs=95.2
Q ss_pred CCCCceEEEEecccccccccccc--------ccccCCCcEEEecccccC----CC--cc-ccc-ccc--eEEeccccccC
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFL----SR--KF-DVS-KFG--VIIAGAQKNIG 331 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G----~~--pI-Dv~-~~g--vl~asaqK~lG 331 (621)
+++++++|.+++..+.||...|. +++++|+++|+|.+++.+ .. ++ +++ .++ +++.|.+|++|
T Consensus 160 l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~ 239 (386)
T 1u08_A 160 LSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYH 239 (386)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTT
T ss_pred hcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcC
Confidence 45689999999999999998862 356899999999999863 22 22 222 233 88999999999
Q ss_pred CCc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Q psy8733 332 PAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQE 409 (621)
Q Consensus 332 P~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~ 409 (621)
++| +|++++++++.+++... . .....+++.....++.++|+.. +. .++.+.++.+++.+++++.
T Consensus 240 ~~G~r~G~~~~~~~~~~~l~~~-------~-----~~~~~~~~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~ 305 (386)
T 1u08_A 240 MTGWKVGYCVAPAPISAEIRKV-------H-----QYLTFSVNTPAQLALADMLRAE-PE-HYLALPDFYRQKRDILVNA 305 (386)
T ss_dssp CGGGCCEEEECCHHHHHHHHHH-------H-----HHHTSSCCHHHHHHHHHHHHHC-TH-HHHTHHHHHHHHHHHHHHH
T ss_pred CcccceEEEEcCHHHHHHHHHH-------H-----HhhccCCChHHHHHHHHHHhCC-cH-HHHHHHHHHHHHHHHHHHH
Confidence 999 89999999988765320 0 0112344555666777777654 33 5788889999999999999
Q ss_pred HHcc
Q psy8733 410 IDNS 413 (621)
Q Consensus 410 L~~~ 413 (621)
|+++
T Consensus 306 L~~~ 309 (386)
T 1u08_A 306 LNES 309 (386)
T ss_dssp TTSS
T ss_pred HHHC
Confidence 8876
No 102
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.46 E-value=5.6e-12 Score=132.25 Aligned_cols=124 Identities=8% Similarity=0.059 Sum_probs=93.9
Q ss_pred CceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCc---ccc-cccc---eEEeccccccCCCc--cEEE
Q psy8733 273 EASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRK---FDV-SKFG---VIIAGAQKNIGPAG--ITVV 338 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~p---IDv-~~~g---vl~asaqK~lGP~G--lg~l 338 (621)
++++|.+++..+.||...|. +.+..++++|+|.+++.+..+ +++ +.++ +++.|.+|++|++| +|++
T Consensus 164 ~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 243 (369)
T 3cq5_A 164 QPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYF 243 (369)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEE
T ss_pred CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhCCCCEEEEEechHhcCCcccceEEE
Confidence 68899999999999999985 445567999999999987743 332 3344 88899999999778 6999
Q ss_pred EEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 339 IVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 339 ivr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
++++++++++.... ...++|....+++.++++.. . .++.+.++.+++.+++++.|++.
T Consensus 244 ~~~~~~~~~l~~~~--------------~~~~~~~~~~~a~~~~l~~~--~-~~~~~~~~~~~~~~~l~~~L~~~ 301 (369)
T 3cq5_A 244 VANPAFIDAVMLVR--------------LPYHLSALSQAAAIVALRHS--A-DTLGTVEKLSVERVRVAARLEEL 301 (369)
T ss_dssp EECTHHHHHHHTTS--------------CTTCSCHHHHHHHHHHHHTH--H-HHHTHHHHHHHHHHHHHHHHHHH
T ss_pred EeCHHHHHHHHHcC--------------CCCCCCHHHHHHHHHHhcCH--H-HHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999887664311 12356777777777777642 2 47788888899999999999875
No 103
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.46 E-value=5.1e-12 Score=131.16 Aligned_cols=243 Identities=12% Similarity=0.089 Sum_probs=155.6
Q ss_pred CceeccCC--CCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcchhh
Q psy8733 51 PVINFGAG--PAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNYKILFLQGGGTGMF 128 (621)
Q Consensus 51 ~~~lf~aG--Ps~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p~~yeI~f~~gggT~~~ 128 (621)
.++.|+.| |.+.|++|++++.+.+.++... .+ ..+.+.|+.++++++++.+ +|+|+ +|||+
T Consensus 27 ~~idl~~~~~~~~~~~~v~~a~~~~~~~~~~y-------~~------~~~~~l~~~la~~~~~~~~-~i~~~-~g~t~-- 89 (361)
T 3ftb_A 27 ELLDYSSNINPLGIPKSFLNNIDEGIKNLGVY-------PD------VNYRRLNKSIENYLKLKDI-GIVLG-NGASE-- 89 (361)
T ss_dssp -CEETTCCCCTTCSCHHHHTTHHHHHHGGGSC-------CC------TTCHHHHHHHHHHHTCCSC-EEEEE-SSHHH--
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHHHhcCC-------CC------ccHHHHHHHHHHHhCCCcc-eEEEc-CCHHH--
Confidence 44555555 3457899999999988653221 11 1246789999999998654 78876 67888
Q ss_pred hHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeeccccccccc
Q psy8733 129 AAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSI 208 (621)
Q Consensus 129 ~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~ 208 (621)
+++++...+ |+|++. .+++.+ +...++..|...+..+..
T Consensus 90 ---al~~~~~~~-----d~vi~~-------------------------~~~~~~--~~~~~~~~g~~~~~~~~~------ 128 (361)
T 3ftb_A 90 ---IIELSISLF-----EKILII-------------------------VPSYAE--YEINAKKHGVSVVFSYLD------ 128 (361)
T ss_dssp ---HHHHHHTTC-----SEEEEE-------------------------ESCCTH--HHHHHHHTTCEEEEEECC------
T ss_pred ---HHHHHHHHc-----CcEEEe-------------------------cCChHH--HHHHHHHcCCeEEEeecC------
Confidence 455543333 444443 333332 344556667543322210
Q ss_pred CCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccccccc
Q psy8733 209 PDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGV 288 (621)
Q Consensus 209 ~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET~tGv 288 (621)
+....+++++ +. .+++ +++|.+++..|.+|.
T Consensus 129 --------------------------~~~~~~~~~l---------------------~~-~l~~-~~~v~i~~p~nptG~ 159 (361)
T 3ftb_A 129 --------------------------ENMCIDYEDI---------------------IS-KIDD-VDSVIIGNPNNPNGG 159 (361)
T ss_dssp --------------------------TTSCCCHHHH---------------------HH-HTTT-CSEEEEETTBTTTTB
T ss_pred --------------------------cccCCCHHHH---------------------HH-hccC-CCEEEEeCCCCCCCC
Confidence 0000011111 11 2344 899999999999999
Q ss_pred cccc--------ccccCCCcEEEecccccCCCc-----ccc-cccc--eEEeccccccCCCc--cEEEE-EchhHHhhhC
Q psy8733 289 EFNY--------IPDSQGIPLVSDMSSNFLSRK-----FDV-SKFG--VIIAGAQKNIGPAG--ITVVI-VREDLLEYAL 349 (621)
Q Consensus 289 ~~p~--------i~~~~g~llvvDavSs~G~~p-----IDv-~~~g--vl~asaqK~lGP~G--lg~li-vr~~ll~~~~ 349 (621)
..|. +++++|+++|+|.+++.+... +.. ...+ +++.|.+|++|++| +|+++ .++++.+++.
T Consensus 160 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~ 239 (361)
T 3ftb_A 160 LINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNNKEIAAKIK 239 (361)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESCHHHHHHHH
T ss_pred CCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCCHHHHHHHH
Confidence 9873 234789999999998855442 121 1223 67789999999776 58877 7778777653
Q ss_pred CCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcc
Q psy8733 350 PITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFY 417 (621)
Q Consensus 350 ~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~ 417 (621)
.. ....++|....+++.++|+. .. .++.+.++.+++.+++++.|++++++.
T Consensus 240 ~~--------------~~~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~ 290 (361)
T 3ftb_A 240 AK--------------QNPWNINCFAEMAAINCLKD--TN-YIEESLLWIKKERKRFIEELNKIGFIK 290 (361)
T ss_dssp TT--------------SCTTCSCHHHHHHHHHTSSC--HH-HHHHHHHHHHHHHHHHHHHHHHSSSEE
T ss_pred hh--------------CCCCCCCHHHHHHHHHHhcC--HH-HHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 21 11347788888888888874 23 588899999999999999999887553
No 104
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.46 E-value=1.7e-12 Score=137.41 Aligned_cols=133 Identities=12% Similarity=0.100 Sum_probs=100.3
Q ss_pred CCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCC-c----c----cc-cccceEEeccccccCCCccE
Q psy8733 272 PEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSR-K----F----DV-SKFGVIIAGAQKNIGPAGIT 336 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~-p----I----Dv-~~~gvl~asaqK~lGP~Glg 336 (621)
+++++|.+++..+.+|...|+ +++++|+++|+|.+++.|.. | + ++ ++.++++.|..|.+|.+| |
T Consensus 177 ~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G-G 255 (401)
T 2bwn_A 177 AAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG-G 255 (401)
T ss_dssp TSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC-E
T ss_pred CCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC-C
Confidence 478999999999999999996 45678999999999995532 1 1 22 123578889999999888 9
Q ss_pred EEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCc
Q psy8733 337 VVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKF 416 (621)
Q Consensus 337 ~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~ 416 (621)
+++.++++.+.+......+ ....+||+ ..++++.++++++.+. |++.+.++.+++.+++++.|+++ |+
T Consensus 256 ~~~~~~~~~~~l~~~~~~~---------~~~~~~~~-~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~ 323 (401)
T 2bwn_A 256 YIAASARMVDAVRSYAPGF---------IFSTSLPP-AIAAGAQASIAFLKTA-EGQKLRDAQQMHAKVLKMRLKAL-GM 323 (401)
T ss_dssp EEEECHHHHHHHHHHCHHH---------HTSBCCCH-HHHHHHHHHHHHHTSH-HHHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred EEecCHHHHHHHHHhCcCc---------eecCCCCH-HHHHHHHHHHHHHHhc-ccHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 9999988876542110000 11234666 7788889999999776 78999999999999999999987 45
Q ss_pred c
Q psy8733 417 Y 417 (621)
Q Consensus 417 ~ 417 (621)
.
T Consensus 324 ~ 324 (401)
T 2bwn_A 324 P 324 (401)
T ss_dssp C
T ss_pred c
Confidence 3
No 105
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.45 E-value=3.4e-12 Score=133.55 Aligned_cols=131 Identities=15% Similarity=0.187 Sum_probs=100.0
Q ss_pred CCCCceEEEEecccccccccccc----ccccCCCcEEEecccccCCC---ccccccc----c--eEEeccccccCCCc--
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY----IPDSQGIPLVSDMSSNFLSR---KFDVSKF----G--VIIAGAQKNIGPAG-- 334 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~----i~~~~g~llvvDavSs~G~~---pIDv~~~----g--vl~asaqK~lGP~G-- 334 (621)
+++++++|.+++..+.+|...|. +++++|+++|+|.+++.+.. +.++..+ + +++.|.+|++|++|
T Consensus 151 l~~~~~~v~~~~p~nptG~~~~~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 230 (370)
T 2z61_A 151 LSDKTKAIIINSPSNPLGEVIDREIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSKLYAMTGWR 230 (370)
T ss_dssp CCSSEEEEEEESSCTTTCCCCCHHHHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCSSEEEEEESTTTTTCGGGC
T ss_pred cccCceEEEEcCCCCCcCcccCHHHHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCCcEEEEecChhccCCccce
Confidence 34578999999999999999884 45678999999999997654 3444332 3 78999999999889
Q ss_pred cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 335 ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 335 lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
+|+++.++++.+++... . .....++|....+++.++|+.+.+. .++.+.++.+++.+++++.|+++
T Consensus 231 ~G~~~~~~~~~~~~~~~-------~-----~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 296 (370)
T 2z61_A 231 IGYVISNDEIIEAILKL-------Q-----QNLFISAPTISQYAALKAFEKETER-EINSMIKEFDRRRRLVLKYVKDF 296 (370)
T ss_dssp CEEEECCHHHHHHHHHH-------H-----HHHTSSSCHHHHHHHGGGGSHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEECHHHHHHHHHH-------H-----hhcccCCCHHHHHHHHHHHhccCHH-HHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999988765321 0 0112466777788888888762233 57888899999999999999887
No 106
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.45 E-value=4.4e-12 Score=134.13 Aligned_cols=130 Identities=12% Similarity=0.098 Sum_probs=92.2
Q ss_pred CCCCceEEEEeccccccccccc---c-----ccccCCCcEEEecccccCCC---cccccc----c--ceEEeccccccCC
Q psy8733 270 RDPEASYLYYCDNETVDGVEFN---Y-----IPDSQGIPLVSDMSSNFLSR---KFDVSK----F--GVIIAGAQKNIGP 332 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p---~-----i~~~~g~llvvDavSs~G~~---pIDv~~----~--gvl~asaqK~lGP 332 (621)
+++++++|.+++..|.+|...| + +++++|+++|+|.+++.+.. +.++.. . ++++.|.+|++|+
T Consensus 171 l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~ 250 (389)
T 1o4s_A 171 LVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSM 250 (389)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCCHHHHCSSSTTEEEEEESTTTTTC
T ss_pred cccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCHhhcCCCCCcEEEEeechhhcCC
Confidence 4567899999999999999877 2 34578999999999987654 223322 2 3889999999998
Q ss_pred Cc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Q psy8733 333 AG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEI 410 (621)
Q Consensus 333 ~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L 410 (621)
+| +|+++.++++.+++.+.. ....+++++ ...+++. ..+ +. |++.+.++.+++.+++++.|
T Consensus 251 ~G~r~G~l~~~~~~~~~l~~~~-----------~~~~~~~~~-~~~~a~~---~~l-~~-~~~~~~~~~~~~~~~l~~~L 313 (389)
T 1o4s_A 251 TGWRVGYLISSEKVATAVSKIQ-----------SHTTSCINT-VAQYAAL---KAL-EV-DNSYMVQTFKERKNFVVERL 313 (389)
T ss_dssp GGGCCEEEECCHHHHHHHHHHH-----------HHHTCSCCH-HHHHHHH---HHT-TC-CCHHHHHHHHHHHHHHHHHH
T ss_pred cccceEEEEeCHHHHHHHHHHh-----------hhcccCCCH-HHHHHHH---HHH-hc-cHHHHHHHHHHHHHHHHHHH
Confidence 89 899999999877653210 011233433 3333333 333 33 48888999999999999999
Q ss_pred HccCCcc
Q psy8733 411 DNSDKFY 417 (621)
Q Consensus 411 ~~~~g~~ 417 (621)
+++ |+.
T Consensus 314 ~~~-g~~ 319 (389)
T 1o4s_A 314 KKM-GVK 319 (389)
T ss_dssp HHT-TCC
T ss_pred Hhc-CCe
Confidence 887 443
No 107
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.45 E-value=3.6e-12 Score=135.42 Aligned_cols=133 Identities=11% Similarity=0.114 Sum_probs=96.1
Q ss_pred CCCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC---ccccccc-----ceEEeccccccCCC
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR---KFDVSKF-----GVIIAGAQKNIGPA 333 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~---pIDv~~~-----gvl~asaqK~lGP~ 333 (621)
+++++++|.+++..|.+|...+. +++++|+++|+|.+++.+.. +..+..+ ++++.|.+|++|++
T Consensus 171 l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 250 (406)
T 1xi9_A 171 ITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHISPGSLTKDVPVIVMNGLSKVYFAT 250 (406)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCCHHHHCSSSCEEEEEESTTTTCCG
T ss_pred hCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHcCCCceEEEEeccccccCCC
Confidence 44578999999999999998762 34678999999999987542 3334333 46778899999988
Q ss_pred c--cEEEE--Ech----hHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q psy8733 334 G--ITVVI--VRE----DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVL 405 (621)
Q Consensus 334 G--lg~li--vr~----~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~ 405 (621)
| +|+++ .++ ++.+++.. .. . .. .++|....+++.++|+.. .+ +++.+.++.+++.++
T Consensus 251 G~r~G~~~~~~~~~~~~~l~~~l~~-------~~---~--~~-~~~~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~~ 315 (406)
T 1xi9_A 251 GWRLGYMYFVDPENKLSEVREAIDR-------LA---R--IR-LCPNTPAQFAAIAGLTGP-MD-YLKEYMKKLKERRDY 315 (406)
T ss_dssp GGCCEEEEEECTTCTTHHHHHHHHH-------HH---H--HT-CCSCSHHHHHHHHHHHSC-CH-HHHHHHHHHHHHHHH
T ss_pred ccEEEEEEEecCchhHHHHHHHHHH-------HH---H--hh-cCCCHHHHHHHHHHHhCC-cH-HHHHHHHHHHHHHHH
Confidence 9 89999 888 77765531 00 0 11 456666677777777533 22 378888899999999
Q ss_pred HHHHHHccCCcc
Q psy8733 406 LYQEIDNSDKFY 417 (621)
Q Consensus 406 L~e~L~~~~g~~ 417 (621)
+++.|++++|+.
T Consensus 316 l~~~L~~~~~~~ 327 (406)
T 1xi9_A 316 IYKRLNEIPGIS 327 (406)
T ss_dssp HHHHHHTSTTEE
T ss_pred HHHHHHhCCCCe
Confidence 999999876554
No 108
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.44 E-value=1.2e-12 Score=139.41 Aligned_cols=133 Identities=12% Similarity=0.061 Sum_probs=96.1
Q ss_pred CCCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC----cccccc----c--ceEEeccccccC
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR----KFDVSK----F--GVIIAGAQKNIG 331 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~----pIDv~~----~--gvl~asaqK~lG 331 (621)
+++++++|.+++..|.+|...|. +++++|+++|+|.+++.+.. +.++.. + ++++.|.+|++|
T Consensus 157 l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~ 236 (411)
T 2o0r_A 157 VTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFN 236 (411)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTT
T ss_pred hccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcC
Confidence 45678999999999999998773 34678999999999987532 233322 3 388999999999
Q ss_pred CCc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Q psy8733 332 PAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQE 409 (621)
Q Consensus 332 P~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~ 409 (621)
++| +|++++++++++.+... .. ....+++....+++.++|+.. +. .++.+.++.+++.+++++.
T Consensus 237 ~~G~r~G~~~~~~~~~~~l~~~-------~~-----~~~~~~~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~ 302 (411)
T 2o0r_A 237 CTGWKIGWACGPAELIAGVRAA-------KQ-----YLSYVGGAPFQPAVALALDTE-DA-WVAALRNSLRARRDRLAAG 302 (411)
T ss_dssp CTTTCEEEEECCHHHHHHHHHH-------HH-----HHTSCCCTTHHHHHHHHHHHC-HH-HHHHHHHHHHHHHHHHHHH
T ss_pred CccceEEEEeeCHHHHHHHHHH-------Hh-----hccCCCChHHHHHHHHHHhCC-hH-HHHHHHHHHHHHHHHHHHH
Confidence 999 99999999988765320 00 011233344556666777654 23 4788889999999999999
Q ss_pred HHccCCcc
Q psy8733 410 IDNSDKFY 417 (621)
Q Consensus 410 L~~~~g~~ 417 (621)
|++. |+.
T Consensus 303 L~~~-g~~ 309 (411)
T 2o0r_A 303 LTEI-GFA 309 (411)
T ss_dssp HHHH-TCE
T ss_pred HHHc-CCE
Confidence 9886 343
No 109
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.44 E-value=1.1e-12 Score=142.33 Aligned_cols=128 Identities=12% Similarity=0.090 Sum_probs=93.8
Q ss_pred CceEEEEecccccccccccc---ccccCCCcEEEecccccCC-----CcccccccceEEeccccccC-CCccEEEEEchh
Q psy8733 273 EASYLYYCDNETVDGVEFNY---IPDSQGIPLVSDMSSNFLS-----RKFDVSKFGVIIAGAQKNIG-PAGITVVIVRED 343 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~---i~~~~g~llvvDavSs~G~-----~pIDv~~~gvl~asaqK~lG-P~Glg~livr~~ 343 (621)
++++|.++...+.++.-... +++++|+++|+|.+|+.|. .+-.++..|+++.|.||++| |.| |+++.+++
T Consensus 185 ~~~~i~~~~~~~~~~~~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~~~di~~~s~sK~l~G~~g-G~i~~~~~ 263 (447)
T 3h7f_A 185 RPKVIIAGWSAYPRVLDFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVPHADVVSTTVHKTLGGGRS-GLIVGKQQ 263 (447)
T ss_dssp CCSEEEEECSSCCSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSGGGCCCSC-EEEEECGG
T ss_pred CCeEEEEcCCCCCCccCHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCCCCcEEEecCCcCCCCCCe-EEEEECHH
Confidence 56788876666655552222 5568899999999986642 22223445799999999995 988 99999988
Q ss_pred HHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 344 LLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 344 ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
+.+.+.+. ......++|+...+.++.+++..+.+. +++.+.++..++++++.+.|.+.
T Consensus 264 ~~~~l~~~-----------~~~~~~~~~~~~~~~a~~~a~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 321 (447)
T 3h7f_A 264 YAKAINSA-----------VFPGQQGGPLMHVIAGKAVALKIAATP-EFADRQRRTLSGARIIADRLMAP 321 (447)
T ss_dssp GHHHHHHH-----------HTTTTCSSCCHHHHHHHHHHHHHTTSH-HHHHHHHHHHHHHHHHHHHHTSH
T ss_pred HHHHHhhh-----------cCCcccCCccHHHHHHHHHHHHHhhCH-HHHHHHHHHHHHHHHHHHHHHhc
Confidence 87654320 112345788888889999998877665 57888999999999999999876
No 110
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.44 E-value=2.2e-12 Score=138.84 Aligned_cols=138 Identities=12% Similarity=0.108 Sum_probs=95.4
Q ss_pred CCceEEEEecccccccccccc--------ccccCCCcEEEeccccc----CCCccccccc----c--eEEeccccccCCC
Q psy8733 272 PEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNF----LSRKFDVSKF----G--VIIAGAQKNIGPA 333 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~----G~~pIDv~~~----g--vl~asaqK~lGP~ 333 (621)
+++++|.+++..|.||+..+. +++++|+++|+|.+++. +..+..+..+ + +++.|.+|++|++
T Consensus 208 ~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 287 (449)
T 3qgu_A 208 KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFT 287 (449)
T ss_dssp CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTCT
T ss_pred CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCCc
Confidence 678999999999999999873 34578999999999987 3334444433 2 7789999999977
Q ss_pred c--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 334 G--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 334 G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
| +|+++.++++++.. ..+..-.+.. .....+.+++.....++.++++..... .++.+.++.+++.+++++.|.
T Consensus 288 G~r~G~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~ 362 (449)
T 3qgu_A 288 GVRLGWTVVPKALKYAN--GEPVHADWNR--VMTTCFNGASNIVQAGGLACLQPEGLK-EMNAMIKFYKENAQILKTTFT 362 (449)
T ss_dssp TCCCEEEECCTTCBCTT--SCBHHHHHHH--HHHHSCCCCCHHHHHHHHHHTSHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred cceeEEEecCHHHHhhh--hhhHHHHHHH--HhhcccCCCCHHHHHHHHHHHhhcCHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 7 89999988875420 0000000000 012334567777777777776642222 478888999999999999998
Q ss_pred ccC
Q psy8733 412 NSD 414 (621)
Q Consensus 412 ~~~ 414 (621)
+++
T Consensus 363 ~~g 365 (449)
T 3qgu_A 363 EMG 365 (449)
T ss_dssp HTT
T ss_pred HCC
Confidence 873
No 111
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.43 E-value=1.3e-11 Score=129.27 Aligned_cols=134 Identities=14% Similarity=0.133 Sum_probs=96.5
Q ss_pred CCCCceEEEEeccccccccccc---c-----ccccCCCcEEEecccccCCCc-c-c-ccccc--eEEeccccccCCCc--
Q psy8733 270 RDPEASYLYYCDNETVDGVEFN---Y-----IPDSQGIPLVSDMSSNFLSRK-F-D-VSKFG--VIIAGAQKNIGPAG-- 334 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p---~-----i~~~~g~llvvDavSs~G~~p-I-D-v~~~g--vl~asaqK~lGP~G-- 334 (621)
+++++++|.+++..+.+|...| + +++++|+++|+|.+++.+... + . .+.++ +.+.|.+|++|.+|
T Consensus 151 l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 230 (375)
T 3op7_A 151 IRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLSKTYSLPGIR 230 (375)
T ss_dssp CCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCHHHHCTTEEEEEESSSSSSCGGGC
T ss_pred hccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCchhhhcCCEEEEeEChhhcCCcccc
Confidence 4578999999999999999998 3 456899999999998765442 1 1 12233 77889999999777
Q ss_pred cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 335 ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 335 lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
+|+++.++++.+++.... .....+++....+++..+++...+ .++.+.++.+++.+.+.+.|++.+
T Consensus 231 ~G~v~~~~~l~~~~~~~~------------~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~ 296 (375)
T 3op7_A 231 IGWVAANHQVTDILRDYR------------DYTMICAGVFDDLVAQLALAHYQE--ILERNRHILEENLAILDQWIEEEP 296 (375)
T ss_dssp CEEEECCHHHHHHHTTTG------------GGTTSCCCHHHHHHHHHHHHTHHH--HHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred eEEEEeCHHHHHHHHHHH------------hhhccCCCcHHHHHHHHHHhccHH--HHHHHHHHHHHHHHHHHHHHhhCC
Confidence 499999999988764311 111234455555666667775443 367888888888999999998876
Q ss_pred Ccc
Q psy8733 415 KFY 417 (621)
Q Consensus 415 g~~ 417 (621)
++.
T Consensus 297 ~~~ 299 (375)
T 3op7_A 297 LVS 299 (375)
T ss_dssp TEE
T ss_pred Cce
Confidence 553
No 112
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.43 E-value=1e-11 Score=130.96 Aligned_cols=133 Identities=12% Similarity=0.082 Sum_probs=97.8
Q ss_pred CCceEEEEeccccccccccc---c-----ccccCCCcEEEecccccCC----Cccccccc-----c--eEEeccccccCC
Q psy8733 272 PEASYLYYCDNETVDGVEFN---Y-----IPDSQGIPLVSDMSSNFLS----RKFDVSKF-----G--VIIAGAQKNIGP 332 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p---~-----i~~~~g~llvvDavSs~G~----~pIDv~~~-----g--vl~asaqK~lGP 332 (621)
+++++|.+++..|.||...| + +++++|+++|+|.+++.+. .+.++..+ + +++.|.+|++|+
T Consensus 163 ~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 242 (399)
T 1c7n_A 163 KNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNI 242 (399)
T ss_dssp TTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTC
T ss_pred CCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccc
Confidence 57899999999999999988 2 3467999999999998742 33445332 3 778899999998
Q ss_pred Cc--cEEEEEc-hhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Q psy8733 333 AG--ITVVIVR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQE 409 (621)
Q Consensus 333 ~G--lg~livr-~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~ 409 (621)
+| +|+++++ +++.+++... . ....+.|+|....+++.++|+... . .++.+.++.+++.+++.+.
T Consensus 243 ~G~r~G~~~~~~~~~~~~l~~~-------~----~~~~~~~~~~~~~~a~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~ 309 (399)
T 1c7n_A 243 AGMGMSNIIIKNPDIRERFTKS-------R----DATSGMPFTTLGYKACEICYKECG-K-WLDGCIKVIDKNQRIVKDF 309 (399)
T ss_dssp GGGCCEEEECCCHHHHHHHHHH-------H----HHTTCCCCCHHHHHHHHHHHHHCH-H-HHHHHHHHHHHHHHHHHHH
T ss_pred cchheEEEEECCHHHHHHHHHH-------H----hhcccCCCCHHHHHHHHHHHhCCh-H-HHHHHHHHHHHHHHHHHHH
Confidence 88 6999997 5677655320 0 011234677778888777877432 2 4788888999999999999
Q ss_pred HHc-cCCcc
Q psy8733 410 IDN-SDKFY 417 (621)
Q Consensus 410 L~~-~~g~~ 417 (621)
|++ ++|+.
T Consensus 310 L~~~~~~~~ 318 (399)
T 1c7n_A 310 FEVNHPEIK 318 (399)
T ss_dssp HHHHCTTSB
T ss_pred HHhhCCCCe
Confidence 988 66553
No 113
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.41 E-value=9.3e-12 Score=132.55 Aligned_cols=132 Identities=13% Similarity=0.181 Sum_probs=96.7
Q ss_pred CCCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC---ccc-cccc---ceEEeccccccCCCc
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR---KFD-VSKF---GVIIAGAQKNIGPAG 334 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~---pID-v~~~---gvl~asaqK~lGP~G 334 (621)
+++++++|.+++..|.+|...+. +++++|+++|+|.+++.+.. ++. ++.+ ++++.|.+|++|++|
T Consensus 171 l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G 250 (409)
T 2gb3_A 171 INERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIESDKVVVIDSVSKKFSACG 250 (409)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCCTTEEEEEESTTTTTCGG
T ss_pred hCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccCCCCEEEEecchhccCCcc
Confidence 45689999999999999998762 34679999999999987653 223 3332 378889999999889
Q ss_pred --cEEEEEch-hHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 335 --ITVVIVRE-DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 335 --lg~livr~-~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
+|+++.++ ++.+++... . .... +++....+++.++|+.. +. +++.+.++.+++.+++++.|+
T Consensus 251 ~r~G~~~~~~~~l~~~l~~~-------~----~~~~--~~~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~L~ 315 (409)
T 2gb3_A 251 ARVGCLITRNEELISHAMKL-------A----QGRL--APPLLEQIGSVGLLNLD-DS-FFDFVRETYRERVETVLKKLE 315 (409)
T ss_dssp GCCEEEECSCHHHHHHHHHH-------H----HHSC--CCCHHHHHHHHHHHTCC-HH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEECcHHHHHHHHHH-------H----hccC--CCCHHHHHHHHHHHhcc-HH-HHHHHHHHHHHHHHHHHHHHH
Confidence 89999998 887765320 0 0111 56667777777777542 22 478888889999999999998
Q ss_pred ccCCcc
Q psy8733 412 NSDKFY 417 (621)
Q Consensus 412 ~~~g~~ 417 (621)
++ |+.
T Consensus 316 ~~-g~~ 320 (409)
T 2gb3_A 316 EH-GLK 320 (409)
T ss_dssp HT-TCC
T ss_pred Hc-Cce
Confidence 87 443
No 114
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.41 E-value=1.8e-11 Score=128.26 Aligned_cols=129 Identities=12% Similarity=0.066 Sum_probs=92.2
Q ss_pred CCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCC---Cc---ccc-cccc--eEEeccccccCCC
Q psy8733 271 DPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLS---RK---FDV-SKFG--VIIAGAQKNIGPA 333 (621)
Q Consensus 271 ~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~---~p---IDv-~~~g--vl~asaqK~lGP~ 333 (621)
++++++|++++..+.||...|. +++++|+++|+|.+++.+. .+ +++ +.++ +++.|.+|++|++
T Consensus 156 ~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 235 (376)
T 2dou_A 156 WREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLA 235 (376)
T ss_dssp HHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCG
T ss_pred ccCceEEEECCCCCCcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCCh
Confidence 3568999999888999999873 3457899999999998753 22 333 2234 7788999999988
Q ss_pred c--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 334 G--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 334 G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
| +|+++.++++++++... . .....++|....+++.++|+... . .++.+.++.+++.+++.+.|+
T Consensus 236 G~r~G~~~~~~~~~~~l~~~-------~-----~~~~~~~~~~~~~a~~~~l~~~~-~-~~~~~~~~~~~~~~~l~~~L~ 301 (376)
T 2dou_A 236 GFRLGFALGSEEALARLERV-------K-----GVIDFNQYAGVLRMGVEALKTPK-E-VVRGYARVYRERALGMAEALK 301 (376)
T ss_dssp GGCCEEEEECHHHHHHHHHH-------H-----HHHCCCSCHHHHHHHHHHHTSCH-H-HHHHHHHHHHHHHHHHHHHHT
T ss_pred hheeEEEecCHHHHHHHHHH-------H-----HhcccCCCHHHHHHHHHHHhCcH-H-HHHHHHHHHHHHHHHHHHHHH
Confidence 8 69999999988765320 0 01123456666677666765432 2 477888888889999999887
Q ss_pred cc
Q psy8733 412 NS 413 (621)
Q Consensus 412 ~~ 413 (621)
++
T Consensus 302 ~~ 303 (376)
T 2dou_A 302 GV 303 (376)
T ss_dssp TT
T ss_pred Hh
Confidence 64
No 115
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.41 E-value=1.6e-12 Score=137.58 Aligned_cols=127 Identities=15% Similarity=0.109 Sum_probs=92.7
Q ss_pred CceEEEEecccccccccccc-----ccccCCCcEEEecccccCCC-----cccccccceEEecccccc-CCCccEEEEEc
Q psy8733 273 EASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSR-----KFDVSKFGVIIAGAQKNI-GPAGITVVIVR 341 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~-----pIDv~~~gvl~asaqK~l-GP~Glg~livr 341 (621)
++++|.+++..+ |...|+ +++++|+++|+|.+++.|.. +.+++..|+++.|.||++ ||.| |+++.+
T Consensus 169 ~~~~v~~~~~~~--~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~g~~g-g~~~~~ 245 (420)
T 3gbx_A 169 KPKMIIGGFSAY--SGVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRG-GLILAK 245 (420)
T ss_dssp CCSEEEECCTTC--CSCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTTTSSEEEEESSGGGCSCSC-EEEEES
T ss_pred CCeEEEEecCcc--CCccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccccCCEEEeecccCCCCCCc-eEEEEc
Confidence 578888876444 556664 45689999999999876543 445555679999999999 6888 999998
Q ss_pred h---hHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 342 E---DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 342 ~---~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
+ ++.+.+... ......++|+...+.++..++..+.+. +++.+.++..++++++++.|.+.+
T Consensus 246 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~a~~~a~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~g 309 (420)
T 3gbx_A 246 GGDEELYKKLNSA-----------VFPSAQGGPLMHVIAGKAVALKEAMEP-EFKVYQQQVAKNAKAMVEVFLNRG 309 (420)
T ss_dssp SCCHHHHHHHHHH-----------HC----CCCCHHHHHHHHHHHHHTTSH-HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHhhhh-----------cCCCCCCCcchhHHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHHhcC
Confidence 7 555544210 112335688888888888888776554 588899999999999999998853
No 116
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.40 E-value=7.5e-12 Score=131.14 Aligned_cols=127 Identities=11% Similarity=0.135 Sum_probs=91.8
Q ss_pred CceEEEEecccccccccccc-----c---cccCCCcEEEecccccCCCc---ccc-cccc--eEEeccccccCCCc--cE
Q psy8733 273 EASYLYYCDNETVDGVEFNY-----I---PDSQGIPLVSDMSSNFLSRK---FDV-SKFG--VIIAGAQKNIGPAG--IT 336 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~-----i---~~~~g~llvvDavSs~G~~p---IDv-~~~g--vl~asaqK~lGP~G--lg 336 (621)
++++|.+|+..|.||...|. + ++ +|+++|+|.+++.+... .++ +.++ +++.|.+|++|++| +|
T Consensus 146 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G 224 (356)
T 1fg7_A 146 GVKVVYVCSPNNPTGQLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCG 224 (356)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTTCCGGGCCE
T ss_pred CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhhcCchhhhE
Confidence 78999999999999999884 2 34 89999999999855422 232 3344 77889999999888 69
Q ss_pred EEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCC
Q psy8733 337 VVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDK 415 (621)
Q Consensus 337 ~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g 415 (621)
+++.++++++++.... . ..++|.....++.++|+..... .++.+.++.+++.+++++.|+++++
T Consensus 225 ~~~~~~~~~~~l~~~~-------------~-~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~ 288 (356)
T 1fg7_A 225 FTLANEEVINLLMKVI-------------A-PYPLSTPVADIAAQALSPQGIV-AMRERVAQIIAEREYLIAALKEIPC 288 (356)
T ss_dssp EEEECHHHHHHHHHHS-------------C-SSCSCHHHHHHHHHHTSHHHHH-HHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred EEEeCHHHHHHHHHhc-------------C-CCCCCHHHHHHHHHHhcCccHH-HHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999887653210 1 1256666666655555432111 1678888888999999999988764
No 117
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.40 E-value=2.3e-11 Score=129.31 Aligned_cols=133 Identities=10% Similarity=0.123 Sum_probs=97.4
Q ss_pred CCCCceEEEEecccccccccccc--------ccccCCCcEEEeccccc----CCCccccccc----c--eEEeccccccC
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNF----LSRKFDVSKF----G--VIIAGAQKNIG 331 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~----G~~pIDv~~~----g--vl~asaqK~lG 331 (621)
+++++++|.+++..|.+|...+. +++++|+++|+|.+++. +..+.++..+ + +++.|.+|.+|
T Consensus 171 ~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g 250 (422)
T 3fvs_A 171 FTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFS 250 (422)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHT
T ss_pred cCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccC
Confidence 45689999999999999999862 34678999999999986 3334444332 3 77888899999
Q ss_pred CCc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHH-----hhCCHHHHHHHHHHHHH
Q psy8733 332 PAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK-----RQGGLAKMEQNSLQKSV 404 (621)
Q Consensus 332 P~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~-----~~gGl~~i~~r~~~la~ 404 (621)
++| +|+++.++++++.+.. . ......++|....+++.++++... ....++.+.++.+++.+
T Consensus 251 ~~G~r~G~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (422)
T 3fvs_A 251 ATGWKVGWVLGPDHIMKHLRT-----------V-HQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRD 318 (422)
T ss_dssp CGGGCCEEEECCHHHHHHHHH-----------H-HHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHH
T ss_pred CccceEEEEEeCHHHHHHHHH-----------H-HhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHH
Confidence 777 8999999998776521 0 012234566777778777776411 11147888999999999
Q ss_pred HHHHHHHccC
Q psy8733 405 LLYQEIDNSD 414 (621)
Q Consensus 405 ~L~e~L~~~~ 414 (621)
++++.|.+++
T Consensus 319 ~l~~~L~~~g 328 (422)
T 3fvs_A 319 HMIRSLQSVG 328 (422)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHHcC
Confidence 9999999873
No 118
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.40 E-value=4e-12 Score=134.45 Aligned_cols=133 Identities=11% Similarity=0.085 Sum_probs=95.7
Q ss_pred CCCCceEEEEecccccccccccc--------ccccCCCcEEEecccccC----CCccccccc----c--eEEeccccccC
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFL----SRKFDVSKF----G--VIIAGAQKNIG 331 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G----~~pIDv~~~----g--vl~asaqK~lG 331 (621)
+++++++|.+++..+.+|...+. +++++|+++|+|.+++.+ ..+.++..+ + +++.|.+|.+|
T Consensus 164 ~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g 243 (410)
T 3e2y_A 164 FSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFS 243 (410)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSS
T ss_pred cCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcC
Confidence 45689999999999999998652 346789999999999853 233334332 3 77888899999
Q ss_pred CCc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHH-----hhCCHHHHHHHHHHHHH
Q psy8733 332 PAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK-----RQGGLAKMEQNSLQKSV 404 (621)
Q Consensus 332 P~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~-----~~gGl~~i~~r~~~la~ 404 (621)
++| +|+++.++++++.+.. . ......+++....+++.++|+... ....++.+.++.+++.+
T Consensus 244 ~~G~r~G~~~~~~~~~~~~~~-------~-----~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (410)
T 3e2y_A 244 VTGWKLGWSIGPAHLIKHLQT-------V-----QQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRD 311 (410)
T ss_dssp CGGGCCEEEECCHHHHHHHHH-------H-----HHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEECHHHHHHHHH-------H-----HHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHH
Confidence 777 7999999998876531 0 012234566677777777776310 11147888899999999
Q ss_pred HHHHHHHccC
Q psy8733 405 LLYQEIDNSD 414 (621)
Q Consensus 405 ~L~e~L~~~~ 414 (621)
++++.|++++
T Consensus 312 ~l~~~L~~~g 321 (410)
T 3e2y_A 312 RMVRLLNSVG 321 (410)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHHCC
Confidence 9999998873
No 119
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.40 E-value=4.4e-12 Score=133.81 Aligned_cols=132 Identities=14% Similarity=0.188 Sum_probs=83.8
Q ss_pred CCCCceEEEEecccccccccccc--------cccc------CCCcEEEecccccCC-----Ccccccccc--eEEecccc
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDS------QGIPLVSDMSSNFLS-----RKFDVSKFG--VIIAGAQK 328 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~------~g~llvvDavSs~G~-----~pIDv~~~g--vl~asaqK 328 (621)
+++++++|.+++..|.||...+. ++++ +|+++|+|.+++.+. .+...+.++ +++.|.+|
T Consensus 169 l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 248 (398)
T 3ele_A 169 INAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYDNTLVCYSYSK 248 (398)
T ss_dssp CCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCSSEEEEEESTT
T ss_pred hCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcCCeEEEEehhh
Confidence 45689999999999999999883 2345 899999999998632 333334444 88889999
Q ss_pred ccCCCc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q psy8733 329 NIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLL 406 (621)
Q Consensus 329 ~lGP~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L 406 (621)
++|++| +|++++++++.+... .... +.. ........+++.....++..+++ .. . ..++.+++.+++
T Consensus 249 ~~~~~G~r~G~~~~~~~~~~~~~-~~~~---~~~-~~~~~~~~~~~~~~~~a~~~~l~---~~-~---~~~~~~~~~~~l 316 (398)
T 3ele_A 249 SLSLPGERIGYVLVPDEVYDKAE-LYAA---VCG-AGRALGYVCAPSLFQKMIVKCQG---AT-G---DINAYKENRDLL 316 (398)
T ss_dssp TSSCTTTCCEEEECCTTSTTHHH-HHHH---HHH-HHHHTTCCCSCHHHHHHHTTCTT---CC-C---CHHHHHHHHHHH
T ss_pred cCCCccceeEEEEEcchhhhHHH-HHHH---HHH-HhhhccccCCCHHHHHHHHHHhc---CH-H---HHHHHHHHHHHH
Confidence 999777 899999988643210 0000 000 00111123444444444443332 22 2 356677778888
Q ss_pred HHHHHcc
Q psy8733 407 YQEIDNS 413 (621)
Q Consensus 407 ~e~L~~~ 413 (621)
++.|+++
T Consensus 317 ~~~L~~~ 323 (398)
T 3ele_A 317 YEGLTRI 323 (398)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 8888876
No 120
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.38 E-value=1.9e-11 Score=127.70 Aligned_cols=125 Identities=16% Similarity=0.186 Sum_probs=88.9
Q ss_pred CCCCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCCCc--cccccc----ceEEeccccccC-C
Q psy8733 270 RDPEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLSRK--FDVSKF----GVIIAGAQKNIG-P 332 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~~p--IDv~~~----gvl~asaqK~lG-P 332 (621)
+++++++|.+++..+.||...| + +++++|+++|+|.+++ ++..+ ++++.+ +++.+| |++| +
T Consensus 169 l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~d~~s~S--K~~~~g 246 (375)
T 2eh6_A 169 LDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALA--KGLGGG 246 (375)
T ss_dssp CCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTT
T ss_pred hcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhhcCCCCCEEEEc--ccccCC
Confidence 4568999999999999999876 3 4567899999999999 76543 455544 367666 9996 6
Q ss_pred CccEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc
Q psy8733 333 AGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN 412 (621)
Q Consensus 333 ~Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~ 412 (621)
.++|++++++++.+++.+. .....+++++... .++.++|+.+. .+.++.+++++++++.|++
T Consensus 247 ~~~G~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~-~~~~~~l~~~~------~~~~~~~~~~~~l~~~L~~ 308 (375)
T 2eh6_A 247 VPIGAILAREEVAQSFTPG-----------SHGSTFGGNPLAC-RAGTVVVDEVE------KLLPHVREVGNYFKEKLKE 308 (375)
T ss_dssp SCCEEEEEEHHHHTTCCTT-----------SCCCSSTTCHHHH-HHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcHHHHhhhcCC-----------CCCCCCCCCHHHH-HHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH
Confidence 6899999999887655331 0123345554444 33345666543 5677788888999999987
Q ss_pred cC
Q psy8733 413 SD 414 (621)
Q Consensus 413 ~~ 414 (621)
++
T Consensus 309 ~~ 310 (375)
T 2eh6_A 309 LG 310 (375)
T ss_dssp TT
T ss_pred Hh
Confidence 65
No 121
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.38 E-value=3.8e-13 Score=143.47 Aligned_cols=104 Identities=34% Similarity=0.663 Sum_probs=95.8
Q ss_pred hHHHHHhhcccccccCCcEEeeecHhHhhhcCC-CCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 448 FFGVIIAGAQKNIGPAGITVVIVREDLLEYALP-ITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 448 ~~~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~-~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
++|++++|+||++||.|++++++|++++++..+ ..|.+++|.....++++++|||++.||.++..|+|+++.||++.++
T Consensus 184 ~~d~~~~s~~K~~gp~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~ 263 (361)
T 3m5u_A 184 NIALFYGGVQKNAGISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVH 263 (361)
T ss_dssp TEEEEEEETTTTSSCTTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHH
T ss_pred cCCEEEEechhccCCCccEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHH
Confidence 368999999999999999999999999988776 7899999888777899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhccCCcccccC
Q psy8733 527 QNSLQKSVLLYQEIDNSDKFYECPV 551 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~~~~~~~v 551 (621)
++.++.++.+|+.+++.+++|.+++
T Consensus 264 ~~~~~l~~~l~~~L~~~~g~~~~~~ 288 (361)
T 3m5u_A 264 EKNSQKATMLYECIDLSNGFYKGHA 288 (361)
T ss_dssp HHHHHHHHHHHHHHHTSTTSEEESS
T ss_pred HHHHHHHHHHHHHHHHCCCeeeccC
Confidence 9999999999999999887766654
No 122
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.37 E-value=3.4e-11 Score=128.65 Aligned_cols=132 Identities=13% Similarity=0.084 Sum_probs=96.6
Q ss_pred CCCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCC------Ccc-ccc-ccc--eEEeccccccC
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLS------RKF-DVS-KFG--VIIAGAQKNIG 331 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~------~pI-Dv~-~~g--vl~asaqK~lG 331 (621)
+++++++|.+++..+.+|...+. +++++|+++|+|.+++.+. .++ .+. .++ +++.|.+|++|
T Consensus 179 l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~ 258 (429)
T 1yiz_A 179 FNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFS 258 (429)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHT
T ss_pred hccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccC
Confidence 45689999999999999999862 3467899999999998532 233 232 344 88999999999
Q ss_pred CCc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHH-----HHhhCCHHHHHHHHHHHHH
Q psy8733 332 PAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAW-----IKRQGGLAKMEQNSLQKSV 404 (621)
Q Consensus 332 P~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~-----i~~~gGl~~i~~r~~~la~ 404 (621)
++| +|++++++++++.+... ......+++.....++.++|+. ......++++.++.+++.+
T Consensus 259 ~~G~r~G~~~~~~~~~~~l~~~------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (429)
T 1yiz_A 259 LTGWKIGWAYGPEALLKNLQMV------------HQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRD 326 (429)
T ss_dssp CGGGCCEEEESCHHHHHHHHHH------------HHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHH
T ss_pred CCCcceEEEEeCHHHHHHHHHH------------HhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHH
Confidence 999 99999999988765320 0112235566667777777776 2112247888999999999
Q ss_pred HHHHHHHcc
Q psy8733 405 LLYQEIDNS 413 (621)
Q Consensus 405 ~L~e~L~~~ 413 (621)
++++.|+++
T Consensus 327 ~l~~~L~~~ 335 (429)
T 1yiz_A 327 YMASFLAEV 335 (429)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhC
Confidence 999999886
No 123
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.36 E-value=3.2e-11 Score=126.01 Aligned_cols=126 Identities=10% Similarity=0.042 Sum_probs=91.9
Q ss_pred CCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC---ccccc---------ccc--eEEecccc
Q psy8733 271 DPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR---KFDVS---------KFG--VIIAGAQK 328 (621)
Q Consensus 271 ~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~---pIDv~---------~~g--vl~asaqK 328 (621)
.+++++|++++..|.+|+..+. +++++|+++|+|.+++.+.. +..+- .++ +++.|.+|
T Consensus 152 ~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 231 (376)
T 3ezs_A 152 LQEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSK 231 (376)
T ss_dssp HHHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTT
T ss_pred ccCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchh
Confidence 3468899999999999999883 24578999999999986443 33321 344 78889999
Q ss_pred ccCCCc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHH
Q psy8733 329 NIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLL 406 (621)
Q Consensus 329 ~lGP~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L 406 (621)
++|++| +|+++.++++.+.+.. . ......++|.....++.++++. .. .++++.++.+++.+++
T Consensus 232 ~~g~~G~r~G~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~l 296 (376)
T 3ezs_A 232 RSSAPGLRSGFIAGDSRLLEKYKA-----------F-RAYLGYTSANAIQKASEAAWLD--DR-HAEFFRNIYANNLKLA 296 (376)
T ss_dssp TTTCGGGCCEEEEECHHHHHHHHH-----------H-HTTTCCCCCHHHHHHHHHHHHC--SH-HHHHHHHHHHHHHHHH
T ss_pred ccCCccceeEEEeeCHHHHHHHHH-----------H-HhhhcCCCChHHHHHHHHHHhC--cH-HHHHHHHHHHHHHHHH
Confidence 998777 7999999988776531 0 1122346777788887777774 22 3778888888888888
Q ss_pred HHHHH
Q psy8733 407 YQEID 411 (621)
Q Consensus 407 ~e~L~ 411 (621)
++.|+
T Consensus 297 ~~~l~ 301 (376)
T 3ezs_A 297 RKIFK 301 (376)
T ss_dssp HHHST
T ss_pred HHHhc
Confidence 88776
No 124
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.36 E-value=5e-12 Score=133.74 Aligned_cols=127 Identities=13% Similarity=0.191 Sum_probs=87.1
Q ss_pred CceEEE-Eecccccccccccc--------ccccCCCcEEEecccccCC----Cccccccc------c--eEEeccccccC
Q psy8733 273 EASYLY-YCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLS----RKFDVSKF------G--VIIAGAQKNIG 331 (621)
Q Consensus 273 ~t~~V~-~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~----~pIDv~~~------g--vl~asaqK~lG 331 (621)
++++|+ +++..|.||...|. +++++|+++|+|.+++.+. .+.++..+ + +++.|.+|++|
T Consensus 162 ~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 241 (397)
T 2zyj_A 162 RPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSKVLS 241 (397)
T ss_dssp CCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEESTTTTC
T ss_pred CCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEeccccccc
Confidence 678874 68888999998873 3457899999999998753 23444433 3 77899999999
Q ss_pred CCc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Q psy8733 332 PAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQE 409 (621)
Q Consensus 332 P~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~ 409 (621)
+| +|+++.++++++++.... ....+++ |....+++.++|+..... .++++.++.+++.+++++.
T Consensus 242 -~G~r~G~~~~~~~~~~~l~~~~-----------~~~~~~~-~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~ 307 (397)
T 2zyj_A 242 -PGLRVAFAVAHPEALQKLVQAK-----------QGADLHT-PMLNQMLVHELLKEGFSE-RLERVRRVYREKAQAMLHA 307 (397)
T ss_dssp -GGGCCEEEECCHHHHHHHHHHH-----------HHHHSSC-CHHHHHHHHHHHTTTHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred -ccceeEEEecCHHHHHHHHHHH-----------HhhcCCC-CHHHHHHHHHHHHhCCHH-HHHHHHHHHHHHHHHHHHH
Confidence 66 699999999887653210 0112334 444555555555422101 3677888888888999999
Q ss_pred HHcc
Q psy8733 410 IDNS 413 (621)
Q Consensus 410 L~~~ 413 (621)
|++.
T Consensus 308 L~~~ 311 (397)
T 2zyj_A 308 LDRE 311 (397)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9873
No 125
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.35 E-value=1.1e-10 Score=125.80 Aligned_cols=139 Identities=12% Similarity=0.077 Sum_probs=80.2
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCcccccccc----eEEec---cccccCCCccEE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG----VIIAG---AQKNIGPAGITV 337 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g----vl~as---aqK~lGP~Glg~ 337 (621)
+++++++|.+|| .+|...|+ +++++|+++|+|+++++|..+ +...++ +++.| +||+-|+. .|+
T Consensus 155 i~~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~-~~~~~~~~~d~~~~s~~~~k~l~~g~-gg~ 229 (437)
T 3bb8_A 155 VSDKTKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTY-DGKMAGTFGDIGTVSFYPAKHITMGE-GGA 229 (437)
T ss_dssp CCTTEEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEE-TTEETTSSSSEEEEECSTTSSSCCSS-CEE
T ss_pred cCCCCeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCceE-CCeecccccCEEEEECcCCcCCCCCC-eEE
Confidence 566899999987 45777764 456789999999999999876 655443 55554 34432333 377
Q ss_pred EEEchhHHhhh----CCCCCc------e-------ee--ccc----c------ccCCCccCCchHHHHHHHHHHHHHHHh
Q psy8733 338 VIVREDLLEYA----LPITPT------V-------FH--FKI----N------ADNNSVYNTPPTFVVHVIQRVFAWIKR 388 (621)
Q Consensus 338 livr~~ll~~~----~~~~P~------~-------ld--~~~----~------~~~~s~~~TP~v~~I~aL~~aL~~i~~ 388 (621)
++.+++.+... .+.... . +. +.. . ...+..+.++++.++.++.. |+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~-l~~--- 305 (437)
T 3bb8_A 230 VFTQSAELKSIIESFRDWGRDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQ-LER--- 305 (437)
T ss_dssp EEESCHHHHHHHHHHHBTTBCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHH-HHH---
T ss_pred EEeCCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHH-HHH---
Confidence 77775655432 111000 0 00 000 0 00111223556666665544 333
Q ss_pred hCCHHHHHHHHHHHHHHHHHHHHccCCcccCc
Q psy8733 389 QGGLAKMEQNSLQKSVLLYQEIDNSDKFYECP 420 (621)
Q Consensus 389 ~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~~ 420 (621)
++...++.+++++++++.|.+++|+...+
T Consensus 306 ---~~~~~~~~~~~~~~l~~~L~~~~g~~~~~ 334 (437)
T 3bb8_A 306 ---IEEFVEKRKANFKYLKDALQSCADFIELP 334 (437)
T ss_dssp ---HHHHHHHHHHHHHHHHHHGGGGTTTEECC
T ss_pred ---HHHHHHHHHHHHHHHHHHhhccCCccccC
Confidence 23445556888899999999886655443
No 126
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.35 E-value=1.7e-12 Score=141.34 Aligned_cols=128 Identities=9% Similarity=0.049 Sum_probs=94.8
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCC-----cccccccc--eEEecccccc-CCCccE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSR-----KFDVSKFG--VIIAGAQKNI-GPAGIT 336 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~-----pIDv~~~g--vl~asaqK~l-GP~Glg 336 (621)
+++++++|.+++ .|.+|...|+ +++++|+++++|.+++. +. |++...++ +++.|.||++ |+.|+|
T Consensus 143 ~~~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~-~~~f~~~~~~~~~~g~Di~~~S~~K~l~~~~g~g 220 (446)
T 2x3l_A 143 NNDGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGA-HFGLQGFPDSTLNYQADYVVQSFHKTLPALTMGS 220 (446)
T ss_dssp ----CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCT-TTTSTTSCCCGGGGTCSEEEECHHHHSSSCTTCE
T ss_pred cCCCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhh-hhccCCCCCChHHcCCCEEEECCccccccccccE
Confidence 567899999999 7779999986 45689999999999986 22 56665554 9999999987 589999
Q ss_pred EEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Q psy8733 337 VVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQE 409 (621)
Q Consensus 337 ~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~ 409 (621)
++++++++++ ..+ + .... .....+||+...++++..+++++.+. |.+++.++.+++++++++.
T Consensus 221 ~l~~~~~~i~-~~~----~---~~~~-~~~~~~s~~~~~~aal~~a~~~l~~~-g~~~~~~~~~~l~~~l~~~ 283 (446)
T 2x3l_A 221 VLYIHKNAPY-REN----I---IEYL-SYFQTSSPSYLIMASLESAAQFYKTY-DSTLFFAKRAQLIECLENK 283 (446)
T ss_dssp EEEEETTCTT-HHH----H---HHHH-HHHSCSSCCHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCcCC-HHH----H---HHHH-HHHcCCCchHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHc
Confidence 9999988653 111 0 0000 01123678888899999999999887 7777888888888888876
No 127
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.34 E-value=1.2e-11 Score=127.97 Aligned_cols=127 Identities=9% Similarity=0.091 Sum_probs=94.5
Q ss_pred CCceEEEEecccccccccccc-----ccccCCCcEEEecccccC-C-Cccc-ccccc--eEEeccccccCCCc--cEEEE
Q psy8733 272 PEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFL-S-RKFD-VSKFG--VIIAGAQKNIGPAG--ITVVI 339 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G-~-~pID-v~~~g--vl~asaqK~lGP~G--lg~li 339 (621)
+++++|++++..|.||...|. +.+..| ++|+|.+++.+ . ..++ ++.++ +++.|.+|++|++| +|+++
T Consensus 137 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~ 215 (335)
T 1uu1_A 137 GEGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAFSLAAQRVGYVV 215 (335)
T ss_dssp CTTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTTTCGGGCCEEEE
T ss_pred CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhcCCcccCeEEEE
Confidence 578999999999999999885 334448 89999999832 2 1234 24444 78899999999888 69999
Q ss_pred EchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcc
Q psy8733 340 VREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFY 417 (621)
Q Consensus 340 vr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~ 417 (621)
.++++.+++.+.. ...++|....+++.++|+.. . .++.+.++.+++.+++.+.|+++ |+.
T Consensus 216 ~~~~~~~~l~~~~--------------~~~~~~~~~~~~~~~~l~~~--~-~~~~~~~~~~~~~~~l~~~L~~~-g~~ 275 (335)
T 1uu1_A 216 ASEKFIDAYNRVR--------------LPFNVSYVSQMFAKVALDHR--E-IFEERTKFIVEERERMKSALREM-GYR 275 (335)
T ss_dssp ECHHHHHHHHHHS--------------CTTCSCHHHHHHHHHHHHTH--H-HHHHHHHHHHHHHHHHHHHHHHH-TCC
T ss_pred eCHHHHHHHHHhc--------------CCCCcCHHHHHHHHHHhCCH--H-HHHHHHHHHHHHHHHHHHHHHHC-CcE
Confidence 9999887653210 11377777888877777652 2 47888888999999999999887 453
No 128
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.34 E-value=7.6e-11 Score=124.05 Aligned_cols=129 Identities=12% Similarity=0.099 Sum_probs=93.7
Q ss_pred CCCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCC----Cccccc--------ccc--eEEeccc
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLS----RKFDVS--------KFG--VIIAGAQ 327 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~----~pIDv~--------~~g--vl~asaq 327 (621)
+.+++++|++++..|.||...+. +++++|+++|+|.+++.+. .++..- +.+ +++.|.+
T Consensus 165 ~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 244 (396)
T 3jtx_A 165 VWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLS 244 (396)
T ss_dssp HHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEEST
T ss_pred hccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEeccc
Confidence 34579999999999999999874 3457899999999998643 333321 234 7888999
Q ss_pred cccCCCc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHH
Q psy8733 328 KNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVL 405 (621)
Q Consensus 328 K~lGP~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~ 405 (621)
|.+|.+| +|+++.++++.+.+.. .. .....++|....+++.++++. +. .++.+.++.+++.+.
T Consensus 245 K~~~~~G~r~G~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~ 309 (396)
T 3jtx_A 245 KRSNVPGLRSGFVAGDAELLKNFLL-------YR-----TYHGSAMSIPVQRASIAAWDD--EQ-HVIDNRRLYQEKFER 309 (396)
T ss_dssp TTSSCGGGCCEEEEECHHHHHHHHH-------HH-----HHHTCCCCHHHHHHHHHHHHC--CH-HHHHHHHHHHHHHHH
T ss_pred cccCCcccceEEEEeCHHHHHHHHH-------HH-----hhcccCCCHHHHHHHHHHhCC--HH-HHHHHHHHHHHHHHH
Confidence 9988776 7999999888776532 00 112346777788888777764 22 477888888888888
Q ss_pred HHHHHHcc
Q psy8733 406 LYQEIDNS 413 (621)
Q Consensus 406 L~e~L~~~ 413 (621)
+++.|++.
T Consensus 310 l~~~l~~~ 317 (396)
T 3jtx_A 310 VIPILQQV 317 (396)
T ss_dssp HHHHHTTT
T ss_pred HHHHHHhc
Confidence 98888764
No 129
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.34 E-value=2.6e-11 Score=140.25 Aligned_cols=140 Identities=11% Similarity=0.003 Sum_probs=99.6
Q ss_pred eEEEEecccccccccccc-----ccccCCCcEEEecccccC---------CCcccccc--cc----eEEeccccccC-CC
Q psy8733 275 SYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFL---------SRKFDVSK--FG----VIIAGAQKNIG-PA 333 (621)
Q Consensus 275 ~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G---------~~pIDv~~--~g----vl~asaqK~lG-P~ 333 (621)
++|.+|+ .|.+|...|+ +++++|+++++|.+++.+ ..++++++ .+ +++.|.||++| |.
T Consensus 283 klviv~~-pn~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~ 361 (730)
T 1c4k_A 283 RLAVIQL-GTYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFS 361 (730)
T ss_dssp SEEEEES-BCTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCT
T ss_pred eEEEEEC-CCCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCcccCCcCcccccccCCCCCCEEEEECCCCCCCCCC
Confidence 7888886 5789999986 457889999999998632 12355532 23 89999999995 88
Q ss_pred ccEEEEEchhHHhhhCCCCCceeecccccc--CCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 334 GITVVIVREDLLEYALPITPTVFHFKINAD--NNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 334 Glg~livr~~ll~~~~~~~P~~ld~~~~~~--~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
|.|+++++++.+.. .+.+++...... ......||+...+.++.+|++++...+| +...++..++++++++.|.
T Consensus 362 ~gg~I~v~~~~l~g----~~~~i~~~~~~~~~~~~~stsp~~~~iaal~aA~~~l~~~~g-~~~~~~~~~~a~~lr~~L~ 436 (730)
T 1c4k_A 362 QTSQIHKKDSHIKG----QLRYCDHKHFNNSFNLFMSTSPFYPMYAALDVNAAMQEGEAG-RKLWHDLLITTIEARKKLI 436 (730)
T ss_dssp TCEEEEEECGGGTT----STTCCCHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEecchhhcC----cccccCHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHh
Confidence 89999999886521 011222111000 0112368999999999999999987424 5566788999999999999
Q ss_pred c-cCCcccCc
Q psy8733 412 N-SDKFYECP 420 (621)
Q Consensus 412 ~-~~g~~~~~ 420 (621)
+ ++|+.+..
T Consensus 437 ~~i~g~~v~~ 446 (730)
T 1c4k_A 437 KAGSMFRPFV 446 (730)
T ss_dssp HTTCSSEESS
T ss_pred hhCCCeEEcc
Confidence 8 77787653
No 130
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.34 E-value=9e-11 Score=125.65 Aligned_cols=139 Identities=10% Similarity=0.106 Sum_probs=92.3
Q ss_pred CCCceEEEEecccccccccccc--------ccccCCCcEEEeccccc---CCCccccccc----c--eEEeccccccCCC
Q psy8733 271 DPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNF---LSRKFDVSKF----G--VIIAGAQKNIGPA 333 (621)
Q Consensus 271 ~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~---G~~pIDv~~~----g--vl~asaqK~lGP~ 333 (621)
.+++++|.+|+..|.||..++. +++++|+++|+|.+++. +..+..+..+ + +++.|..|.+|++
T Consensus 196 ~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~ 275 (432)
T 3ei9_A 196 VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYAGFT 275 (432)
T ss_dssp CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHHCTT
T ss_pred CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhccCCc
Confidence 4678999999999999998873 35678999999999983 3333333222 3 7788999999988
Q ss_pred c--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 334 G--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 334 G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
| +|+++++++++..- ..+..-.+... ....+++++.++..++.++++..... .++.+.++.+++.+++++.|+
T Consensus 276 G~r~G~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~ 350 (432)
T 3ei9_A 276 GVRLGWTVIPKKLLYSD--GFPVAKDFNRI--ICTCFNGASNISQAGALACLTPEGLE-AMHKVIGFYKENTNIIIDTFT 350 (432)
T ss_dssp TTCCEEEECCTTCBCTT--SCBHHHHHHHH--HHHSCCCSCHHHHHHHHHHSSHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEEChHHhhcc--hHHHHHHHHHH--hccccCCCCHHHHHHHHHHHhcccHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 8 79999988872100 00000000000 11234566777777766666421112 367888889999999999998
Q ss_pred ccC
Q psy8733 412 NSD 414 (621)
Q Consensus 412 ~~~ 414 (621)
+++
T Consensus 351 ~~g 353 (432)
T 3ei9_A 351 SLG 353 (432)
T ss_dssp HTT
T ss_pred HCC
Confidence 873
No 131
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.34 E-value=1.7e-11 Score=130.59 Aligned_cols=244 Identities=11% Similarity=0.009 Sum_probs=137.9
Q ss_pred CCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHH-HHHhCCCCCCEEEEEcCCcchhhhHHHHHHhhhc
Q psy8733 61 KLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAAL-RELLNVPNNYKILFLQGGGTGMFAAVAMNLISSS 139 (621)
Q Consensus 61 ~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~L-a~Ll~~p~~yeI~f~~gggT~~~~a~alNlla~~ 139 (621)
+.|+++++++.+.+.+-. .+..+ ...++.|+.+ ++++|.+. +++++ +|||. |++++...
T Consensus 13 ~~~~~i~~a~~~~~~~~~--------~~~~~----~~~~~l~~~~~a~~~g~~~--~~v~~-~sgt~-----al~~al~~ 72 (377)
T 3ju7_A 13 VPVIEYLDELKEIDASHI--------YTNYG----PINQRFEQTIMSGFFQNRG--AVTTV-ANATL-----GLMAAIQL 72 (377)
T ss_dssp CCGGGGHHHHHHHHHHTC--------CSSSC----HHHHHHHHHHHHHTSTTCS--EEEEE-SCHHH-----HHHHHHHH
T ss_pred CCcHHHHHHHHHHHHcCC--------cccCC----HHHHHHHHHHHHHHhCCCC--eEEEe-CCHHH-----HHHHHHHH
Confidence 456778888888764311 11112 2467889999 99999432 57776 67888 56665555
Q ss_pred cCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccccccCCCCCCCCCCC
Q psy8733 140 MNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPE 219 (621)
Q Consensus 140 ~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (621)
+++++||+|++..- ++.+ ....++..|...+..+.. +
T Consensus 73 l~~~~Gd~Vi~~~~-------------------------~~~~--~~~~~~~~G~~~~~v~~~----------~------ 109 (377)
T 3ju7_A 73 KKRKKGKYALMPSF-------------------------TFPA--TPLAAIWCGLEPYFIDIS----------I------ 109 (377)
T ss_dssp HSCTTCCEEEEESS-------------------------SCTH--HHHHHHHTTCEEEEECBC----------T------
T ss_pred cCCCCcCEEEECCC-------------------------CcHH--HHHHHHHcCCEEEEEecC----------C------
Confidence 56777777777653 1111 122345567543332210 0
Q ss_pred ccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCC-CCC--ceEEEEecccccccccccc----
Q psy8733 220 ASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNR-DPE--ASYLYYCDNETVDGVEFNY---- 292 (621)
Q Consensus 220 v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i-~~~--t~~V~~thnET~tGv~~p~---- 292 (621)
..|. ++++++ +. .+ +++ +++|..+| .+|...|+
T Consensus 110 -------------~~~~--~d~~~l---------------------~~-~i~~~~~~tk~v~~~~---~~G~~~~~~~i~ 149 (377)
T 3ju7_A 110 -------------DDWY--MDKTVL---------------------WD-KIEELKEEVAIVVPYA---TFGSWMNLEEYE 149 (377)
T ss_dssp -------------TTCS--BCHHHH---------------------HH-HHHHHGGGEEEECCBC---GGGBCCCCHHHH
T ss_pred -------------ccCC--cCHHHH---------------------HH-HHhcCCCCceEEEEEC---CCCCccCHHHHH
Confidence 0010 122221 00 12 334 88887544 57998885
Q ss_pred -ccccCCCcEEEecccccCCCcc--cc----cccceEEeccccccCCCccEEEEEc-hhHHhhhCCCCC-ce-eeccccc
Q psy8733 293 -IPDSQGIPLVSDMSSNFLSRKF--DV----SKFGVIIAGAQKNIGPAGITVVIVR-EDLLEYALPITP-TV-FHFKINA 362 (621)
Q Consensus 293 -i~~~~g~llvvDavSs~G~~pI--Dv----~~~gvl~asaqK~lGP~Glg~livr-~~ll~~~~~~~P-~~-ld~~~~~ 362 (621)
+++ +|+++|+|++|++|...- .+ .++++..++++|++|+..-|+++.+ +++.+++..... .. ..+. ..
T Consensus 150 ~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~~~~K~l~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~-~~ 227 (377)
T 3ju7_A 150 ELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSFHATKPFGIGEGGLIYSKNEEDIQRIKRMGNFGFDTNRE-CT 227 (377)
T ss_dssp HHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEECBTTSSSCCBSCEEEEESCHHHHHHHHHHTBTTBCTTSC-BC
T ss_pred HHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEECCCCCcCCCCCcEEEEECCHHHHHHHHHHHhcCCCCCCc-ee
Confidence 568 999999999999997421 12 1223566678999986334455554 445554432111 00 0010 11
Q ss_pred cCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCc
Q psy8733 363 DNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKF 416 (621)
Q Consensus 363 ~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~ 416 (621)
..+..+.+.++....++. .+ . .++.+.++.+++++++.+.|++++++
T Consensus 228 ~~g~~~~~~~~~aa~~~~----~l--~-~l~~~~~~~~~~~~~~~~~L~~~~~~ 274 (377)
T 3ju7_A 228 MMGFNCKMSEYAAAIGIA----TM--K-KWDDKLKERTRISEWYKQLLQSNGLM 274 (377)
T ss_dssp SSCCBCCCCHHHHHHHHH----HH--H-THHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred eccccCCCCHHHHHHHHH----HH--H-HHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 123334555555444322 22 2 47788888899999999999988754
No 132
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.33 E-value=2.6e-11 Score=127.72 Aligned_cols=131 Identities=9% Similarity=0.113 Sum_probs=97.0
Q ss_pred CceEEEEecccccccccccc--------ccccCCCcEEEecccccCC----Ccccccc----c-ceEEeccccccCCCc-
Q psy8733 273 EASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLS----RKFDVSK----F-GVIIAGAQKNIGPAG- 334 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~----~pIDv~~----~-gvl~asaqK~lGP~G- 334 (621)
++++|.+++..|.||...|. +++++|+++|+|.+++.+. .+.++.. + +. +.|.+|++|++|
T Consensus 162 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~ 240 (390)
T 1d2f_A 162 ECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPAL 240 (390)
T ss_dssp TEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGG
T ss_pred CCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccCh
Confidence 78999999999999999873 3457899999999998743 3334332 2 46 899999999888
Q ss_pred -cEEEEEc-hhHHhhhCCCCCceeeccccccC-CCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 335 -ITVVIVR-EDLLEYALPITPTVFHFKINADN-NSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 335 -lg~livr-~~ll~~~~~~~P~~ld~~~~~~~-~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
+|+++++ +++.+++... .. ...+.|+|....+++.++++...+ .++.+.++.+++.+++++.|+
T Consensus 241 r~G~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~L~ 307 (390)
T 1d2f_A 241 TGAYGIIENSSSRDAYLSA-----------LKGRDGLSSPSVLALTAHIAAYQQGAP--WLDALRIYLKDNLTYIADKMN 307 (390)
T ss_dssp CCEEEEECSHHHHHHHHHH-----------HHTTSCCCSCCHHHHHHHHHHHHHCHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred hheEEEECCHHHHHHHHHH-----------HhhhcccCCCCHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHH
Confidence 5999986 6776654210 01 233457888888888888875332 478888899999999999998
Q ss_pred c-cCCcc
Q psy8733 412 N-SDKFY 417 (621)
Q Consensus 412 ~-~~g~~ 417 (621)
+ ++|+.
T Consensus 308 ~~~~~~~ 314 (390)
T 1d2f_A 308 AAFPELN 314 (390)
T ss_dssp HHCSSCC
T ss_pred hhCCCCE
Confidence 8 66553
No 133
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.33 E-value=2.6e-11 Score=129.17 Aligned_cols=132 Identities=7% Similarity=0.017 Sum_probs=97.3
Q ss_pred CCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCC---Cccccccc----c--eEEeccccccCCC
Q psy8733 271 DPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLS---RKFDVSKF----G--VIIAGAQKNIGPA 333 (621)
Q Consensus 271 ~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~---~pIDv~~~----g--vl~asaqK~lGP~ 333 (621)
++++++|++++..+.||...|. +++++|+++|+|.+++.+. .+.++..+ + +++.|.+|++|++
T Consensus 179 ~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 258 (404)
T 2o1b_A 179 IDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDVAIEIYSLSKGYNMS 258 (404)
T ss_dssp HHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHHHEEEEEESTTTTTCG
T ss_pred ccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCCEEEEEecchhccCc
Confidence 3578999999888999999862 3468899999999998753 34444332 3 7889999999977
Q ss_pred c--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 334 G--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 334 G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
| +|+++.++++++++... . .....++|....+++.++|+.. +. .++.+.++.+++.+++++.|+
T Consensus 259 G~r~G~~~~~~~~~~~l~~~-------~-----~~~~~~~~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~L~ 324 (404)
T 2o1b_A 259 GFRVGFAVGNKDMIQALKKY-------Q-----THTNAGMFGALQDAAIYALNHY-DD-FLEEQSNVFKTRRDRFEAMLA 324 (404)
T ss_dssp GGCCEEEEECHHHHHHHHHH-------H-----HHHCCCCCHHHHHHHHHHHHHC-HH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheEeEecCHHHHHHHHHH-------H-----hhccCCCCHHHHHHHHHHHhcC-HH-HHHHHHHHHHHHHHHHHHHHH
Confidence 8 69999999988765320 0 1122456677777777777654 22 478888899999999999999
Q ss_pred ccCCcc
Q psy8733 412 NSDKFY 417 (621)
Q Consensus 412 ~~~g~~ 417 (621)
++ |+.
T Consensus 325 ~~-g~~ 329 (404)
T 2o1b_A 325 KA-DLP 329 (404)
T ss_dssp HT-TCC
T ss_pred hc-CCe
Confidence 87 453
No 134
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.33 E-value=4.1e-11 Score=126.47 Aligned_cols=127 Identities=12% Similarity=0.158 Sum_probs=90.8
Q ss_pred CCCCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCC--C--ccccccc--ceEEeccccccC-C
Q psy8733 270 RDPEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLS--R--KFDVSKF--GVIIAGAQKNIG-P 332 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~--~--pIDv~~~--gvl~asaqK~lG-P 332 (621)
+++++++|.++++.+.||...| + +++++|+++|+|.+++ ++. . +++.... |++ +.+|++| +
T Consensus 182 i~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~d~~--s~sK~~~~g 259 (395)
T 1vef_A 182 VDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEHFGIVPDIL--TLAKALGGG 259 (395)
T ss_dssp CCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGTT
T ss_pred hccCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhhcCCCCCEE--EEcccccCC
Confidence 4467899999888888998876 3 4567899999999998 532 2 2233222 355 5599996 5
Q ss_pred CccEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc
Q psy8733 333 AGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN 412 (621)
Q Consensus 333 ~Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~ 412 (621)
.++|++++++++++++.+. ......+++....+++.++++.+.+. .+.++.+++++++++.|++
T Consensus 260 ~~~G~~~~~~~~~~~l~~~------------~~~~~~~~~~~~~~a~~~al~~~~~~----~~~~~~~~~~~~l~~~l~~ 323 (395)
T 1vef_A 260 VPLGVAVMREEVARSMPKG------------GHGTTFGGNPLAMAAGVAAIRYLERT----RLWERAAELGPWFMEKLRA 323 (395)
T ss_dssp SSCEEEEEEHHHHHTSCTT------------SSCCSSTTCHHHHHHHHHHHHHHHHH----TTHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEehHHHHhhhccC------------CcCCCcCCCHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHH
Confidence 6799999999987755320 01122356777888888899988653 4567788888999999987
Q ss_pred cC
Q psy8733 413 SD 414 (621)
Q Consensus 413 ~~ 414 (621)
++
T Consensus 324 ~~ 325 (395)
T 1vef_A 324 IP 325 (395)
T ss_dssp SC
T ss_pred hh
Confidence 64
No 135
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.33 E-value=1.3e-11 Score=143.38 Aligned_cols=132 Identities=15% Similarity=0.126 Sum_probs=95.0
Q ss_pred CceEEEEecccccccccccc-----ccccCCCcEEEecccccCC---------Ccc-----cccccc-eEEeccccccC-
Q psy8733 273 EASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLS---------RKF-----DVSKFG-VIIAGAQKNIG- 331 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~---------~pI-----Dv~~~g-vl~asaqK~lG- 331 (621)
++++|.+|+ +|.+|...|+ +++++++++++|++++.+. .++ |+.+-. +++.|+||+++
T Consensus 312 ~~klvil~~-pn~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L~g 390 (755)
T 2vyc_A 312 KPSYCVVTN-CTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNA 390 (755)
T ss_dssp CCSCEEEES-SCTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSSSC
T ss_pred CCeEEEEEC-CCCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCcccCCcchhcCCcCCccCCCeEEEECccccccC
Confidence 345888887 5899999986 4578999999999986421 111 111111 49999999995
Q ss_pred CCccEEEEEchh--HHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Q psy8733 332 PAGITVVIVRED--LLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQE 409 (621)
Q Consensus 332 P~Glg~livr~~--ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~ 409 (621)
|.|.|+++++++ .++.. .+.... ......||+...++++.+|++++.++ |.+.+.++..++++++++.
T Consensus 391 ~~~g~~i~~~~~~~~i~~~--------~~~~~~-~~~~s~sp~~~~iaal~aA~~~l~~~-gg~~~~~~~~~~a~~~r~~ 460 (755)
T 2vyc_A 391 LSQASYIHVREGRGAINFS--------RFNQAY-MMHATTSPLYAICASNDVAVSMMDGN-SGLSLTQEVIDEAVDFRQA 460 (755)
T ss_dssp CTTCEEEEEECCBTCCCHH--------HHHHHH-HHTSCSSCCHHHHHHHHHHHHHHSTH-HHHHHHHHHHHHHHHHHHH
T ss_pred cCCeeeeeecCcccccCHH--------HHHHHH-HHhCCCCHHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHH
Confidence 888999999876 11100 000000 01223689999999999999999887 4577889999999999999
Q ss_pred HHccCC
Q psy8733 410 IDNSDK 415 (621)
Q Consensus 410 L~~~~g 415 (621)
|.+++|
T Consensus 461 L~~l~~ 466 (755)
T 2vyc_A 461 MARLYK 466 (755)
T ss_dssp HHHHHH
T ss_pred HHhccc
Confidence 999876
No 136
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.32 E-value=1.6e-11 Score=129.43 Aligned_cols=133 Identities=16% Similarity=0.150 Sum_probs=90.5
Q ss_pred CceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC-------ccc-cccc--c-eEEeccccccCCC
Q psy8733 273 EASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR-------KFD-VSKF--G-VIIAGAQKNIGPA 333 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~-------pID-v~~~--g-vl~asaqK~lGP~ 333 (621)
+++++.+++..|.||...+. +++++|+++|+|.+++.+.. ++. +... + +++.|.+|++|++
T Consensus 169 ~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 248 (394)
T 2ay1_A 169 GDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLIAASCSKNFGIY 248 (394)
T ss_dssp TCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEEEEECTTTTTCG
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEEEEeccCCCcCc
Confidence 46778889999999998873 34578999999999986554 233 3332 2 6677889999999
Q ss_pred cc--EEEEE---chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHH-----hhCCHHHHHHHHHHHH
Q psy8733 334 GI--TVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK-----RQGGLAKMEQNSLQKS 403 (621)
Q Consensus 334 Gl--g~liv---r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~-----~~gGl~~i~~r~~~la 403 (621)
|+ |++++ ++++++++... +.. .....+.++|....+++.++|+... +. .++.+.++.+++.
T Consensus 249 G~riG~~~~~~~~~~~~~~l~~~------~~~--~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~ 319 (394)
T 2ay1_A 249 RERTGCLLALCADAATRELAQGA------MAF--LNRQTYSFPPFHGAKIVSTVLTTPELRADWMA-ELEAVRSGMLRLR 319 (394)
T ss_dssp GGCEEEEEEECSSHHHHHHHHHH------HHH--HHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHH-HHHHHHHHHHHHH
T ss_pred CCccceEEEEeCCHHHHHHHHHH------HHH--HHhhhcCCCChHHHHHHHHHhcChHHHHHHHH-HHHHHHHHHHHHH
Confidence 95 99998 67665443110 000 0112344556667777777776431 22 4788888999999
Q ss_pred HHHHHHHHccC
Q psy8733 404 VLLYQEIDNSD 414 (621)
Q Consensus 404 ~~L~e~L~~~~ 414 (621)
+++++.|++++
T Consensus 320 ~~l~~~L~~~~ 330 (394)
T 2ay1_A 320 EQLAGELRDLS 330 (394)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcC
Confidence 99999988763
No 137
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.32 E-value=2e-10 Score=122.96 Aligned_cols=138 Identities=9% Similarity=0.065 Sum_probs=84.1
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCccc---cccc-ceEEeccc--cccCCCccEEE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFD---VSKF-GVIIAGAQ--KNIGPAGITVV 338 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pID---v~~~-gvl~asaq--K~lGP~Glg~l 338 (621)
+++++++|+++| .+|...++ +++++|+++|+|.++++|.. .+ +..+ |+++.|.+ |++++...|++
T Consensus 135 i~~~~~~v~~~~---~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~-~~~~~~~~~~di~~~S~sk~K~l~~~~~G~~ 210 (424)
T 2po3_A 135 VTPRTSAVVGVH---LWGRPCAADQLRKVADEHGLRLYFDAAHALGCA-VDGRPAGSLGDAEVFSFHATKAVNAFEGGAV 210 (424)
T ss_dssp CCTTEEEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCE-ETTEETTSSSSEEEEECCTTSSSCCSSCEEE
T ss_pred hCcCCcEEEEEC---CCCCcCCHHHHHHHHHHcCCEEEEECccccCCe-ECCeecccccCEEEEeCCCCCCccCCCCeEE
Confidence 456789999876 68988775 45689999999999998664 22 2222 36767765 99987667888
Q ss_pred EEc-hhHHhhhCCCCC-ce-eeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCC
Q psy8733 339 IVR-EDLLEYALPITP-TV-FHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDK 415 (621)
Q Consensus 339 ivr-~~ll~~~~~~~P-~~-ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g 415 (621)
+.+ +++++++.+... .. ..+.. ...+..+..++.....++ ..+ . +++.+.++.+++++++++.|.+++|
T Consensus 211 v~~~~~l~~~l~~~~~~~~~~~~~~-~~~g~~~~~~~~~aa~~l----~~~--~-~~~~~~~~~~~~~~~l~~~L~~~~g 282 (424)
T 2po3_A 211 VTDDADLAARIRALHNFGFDLPGGS-PAGGTNAKMSEAAAAMGL----TSL--D-AFPEVIDRNRRNHAAYREHLADLPG 282 (424)
T ss_dssp EESCHHHHHHHHHHHBTTTTCTTCC-TTCCCBCCCCHHHHHHHH----HHH--H-HHHHHHHHHHHHHHHHHHHTCSCTT
T ss_pred EeCCHHHHHHHHHHHhcCccccccc-cccCcCCCcCHHHHHHHH----HHH--H-HHHHHHHHHHHHHHHHHHHhccCCC
Confidence 888 677766543110 00 00000 000011112233333322 222 2 4677888888899999999988766
Q ss_pred cccC
Q psy8733 416 FYEC 419 (621)
Q Consensus 416 ~~~~ 419 (621)
+...
T Consensus 283 ~~~~ 286 (424)
T 2po3_A 283 VLVA 286 (424)
T ss_dssp EEEC
T ss_pred cccc
Confidence 6443
No 138
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.31 E-value=4.9e-11 Score=127.15 Aligned_cols=129 Identities=10% Similarity=0.092 Sum_probs=89.7
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCccccc-ccceEEeccccccC-CCc--cEEEEE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVS-KFGVIIAGAQKNIG-PAG--ITVVIV 340 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~-~~gvl~asaqK~lG-P~G--lg~liv 340 (621)
+++++++|.+++..+.+|...|+ +++++|+++|+|.+++.+....++. ..++++.|.||++| |.+ .|+++.
T Consensus 147 i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~ 226 (398)
T 1gc0_A 147 MTPATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVG 226 (398)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEE
T ss_pred cCCCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCcccccCCchhhCceEEEECCccccCCCCCCeEEEEEE
Confidence 45689999999999999999986 4578999999999999876444442 23489999999997 554 599999
Q ss_pred chhHHh-hhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCC
Q psy8733 341 REDLLE-YALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDK 415 (621)
Q Consensus 341 r~~ll~-~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g 415 (621)
+++.++ .+.+. . . ...-+|++....+++..+++++ +.+.++..+.++.+.+.|.+.++
T Consensus 227 ~~~~~~~~~~~~----~---~----~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~l~~~L~~~~~ 285 (398)
T 1gc0_A 227 SQALVDRIRLQG----L---K----DMTGAVLSPHDAALLMRGIKTL------NLRMDRHCANAQVLAEFLARQPQ 285 (398)
T ss_dssp CHHHHHHHHHTH----H---H----HHTCCCCCHHHHHHHHHHHTTH------HHHHHHHHHHHHHHHHHHHTCTT
T ss_pred ChHHHHHHHHHH----h---h----ccCCCCCCHHHHHHHHhccchH------HHHHHHHHHHHHHHHHHHhcCCC
Confidence 988765 33210 0 0 0012456666666666666654 33445556667777788877653
No 139
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.31 E-value=2.3e-11 Score=130.29 Aligned_cols=127 Identities=15% Similarity=0.204 Sum_probs=89.5
Q ss_pred CceEEE-Eecccccccccccc--------ccccCCCcEEEecccccCC----Cccccccc---c--eEEeccccccCCCc
Q psy8733 273 EASYLY-YCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLS----RKFDVSKF---G--VIIAGAQKNIGPAG 334 (621)
Q Consensus 273 ~t~~V~-~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~----~pIDv~~~---g--vl~asaqK~lGP~G 334 (621)
++++|+ +++..|.||...+. +++++|+++|+|.+++.+. .+.++..+ + +++.|.+|++| +|
T Consensus 187 ~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~G 265 (425)
T 1vp4_A 187 QVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKVLA-PG 265 (425)
T ss_dssp GEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTTTC-GG
T ss_pred CceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccccc-cc
Confidence 678884 78888999999873 3457899999999998743 22344322 3 77889999999 88
Q ss_pred --cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHH-HhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 335 --ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWI-KRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 335 --lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i-~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
+|+++.++++++++... . .....++|....+++.++|+.. .+. .++.+.++.+++.+++++.|+
T Consensus 266 ~r~G~~~~~~~~~~~l~~~-------~-----~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~~l~~~L~ 332 (425)
T 1vp4_A 266 LRIGMVAGSKEFIRKIVQA-------K-----QSADLCSPAITHRLAARYLERYDLLE-QLKPTIELYRRKRTVMLNALE 332 (425)
T ss_dssp GCEEEEECCHHHHHHHHHH-------H-----HHHHSSCCHHHHHHHHHHHHHSCHHH-HTHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEeeCHHHHHHHHHH-------h-----hhhcCCCCHHHHHHHHHHHhcCCHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 59999999988765320 0 0111244566666766676643 112 367788888889999999998
Q ss_pred cc
Q psy8733 412 NS 413 (621)
Q Consensus 412 ~~ 413 (621)
+.
T Consensus 333 ~~ 334 (425)
T 1vp4_A 333 EY 334 (425)
T ss_dssp HH
T ss_pred Hh
Confidence 74
No 140
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.31 E-value=7.6e-13 Score=142.31 Aligned_cols=102 Identities=54% Similarity=0.862 Sum_probs=87.5
Q ss_pred HHHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 449 FGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
+|++|+|+||++||.|++++++|++++++..+..|.+++|.....++++++|||++.||.++..|+|+.+.||+++++++
T Consensus 213 ~~~~~~s~hK~lGP~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~ 292 (386)
T 3qm2_A 213 YGVIYAGAQKNIGPAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKI 292 (386)
T ss_dssp CSEEEEETTTTTCCTTEEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cCEEEEecccccCCCccEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 56789999999999999999999999999888899998888878889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCCcccccC
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPV 551 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v 551 (621)
.++.++.+|+.|++. +||.+++
T Consensus 293 ~~~l~~~l~~~l~~~-~~~~~~~ 314 (386)
T 3qm2_A 293 NQQKAELLYGVIDNS-DFYRNDV 314 (386)
T ss_dssp HHHHHHHHHHHHHTC-SSEECCB
T ss_pred HHHHHHHHHHHHHHC-CCcccCC
Confidence 999999999999887 5776654
No 141
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.31 E-value=1.3e-10 Score=122.45 Aligned_cols=127 Identities=16% Similarity=0.181 Sum_probs=93.0
Q ss_pred CCCCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCC--Cccccccc----ceEEeccccccCC-
Q psy8733 270 RDPEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLS--RKFDVSKF----GVIIAGAQKNIGP- 332 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~--~pIDv~~~----gvl~asaqK~lGP- 332 (621)
+++++++|.+++..+.+|+..| + +++++|+++|+|.+++ ++. .++..+.+ +++++| |++++
T Consensus 179 l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~~~S--K~l~gG 256 (392)
T 3ruy_A 179 ITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFACDWDNVTPDMYILG--KALGGG 256 (392)
T ss_dssp CCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTT
T ss_pred hccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchhhhccCCCCCEEEEc--hhhhCC
Confidence 4578999999999999999997 4 4568999999999996 432 22333332 366665 99866
Q ss_pred -CccEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 333 -AGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 333 -~Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
..+|+++.++++.+++.+. ......++|.....++.++++.+.+ +++.++.+++.+++++.|.
T Consensus 257 ~~~~G~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~l~~~L~ 320 (392)
T 3ruy_A 257 VFPISCAAANRDILGVFEPG------------SHGSTFGGNPLACAVSIAALEVLEE----EKLTERSLQLGEKLVGQLK 320 (392)
T ss_dssp TSCCEEEEECHHHHTTCCTT------------SSCCSSTTCHHHHHHHHHHHHHHHH----TTHHHHHHHHHHHHHHHHT
T ss_pred hhhhEEEEECHHHHhhhccC------------CcCCCCCCCHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHHH
Confidence 3499999999887654321 1112236777888888889988755 4667788888999999998
Q ss_pred ccC
Q psy8733 412 NSD 414 (621)
Q Consensus 412 ~~~ 414 (621)
+++
T Consensus 321 ~~~ 323 (392)
T 3ruy_A 321 EID 323 (392)
T ss_dssp TCC
T ss_pred Hhc
Confidence 764
No 142
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.30 E-value=3.5e-11 Score=127.90 Aligned_cols=127 Identities=10% Similarity=0.083 Sum_probs=95.0
Q ss_pred CceEEEEecccccccccccc-----ccccCCCcEEEecccccCCC---------ccccc-ccceEEeccccccCCCccEE
Q psy8733 273 EASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSR---------KFDVS-KFGVIIAGAQKNIGPAGITV 337 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~---------pIDv~-~~gvl~asaqK~lGP~Glg~ 337 (621)
++++|.+++..+.+|...|+ +++++|+++|+|.+++.|.. ..++. +.++++.|.+|++|++| |+
T Consensus 186 ~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g-g~ 264 (409)
T 3kki_A 186 GPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA-GA 264 (409)
T ss_dssp CSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC-EE
T ss_pred CCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc-eE
Confidence 46899999999999999985 45689999999999987553 12332 34588899999998665 99
Q ss_pred EEEchhHHhhhCCCCCceeeccccccCCCcc-CCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 338 VIVREDLLEYALPITPTVFHFKINADNNSVY-NTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 338 livr~~ll~~~~~~~P~~ld~~~~~~~~s~~-~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
++.++++.+.+..... ...+ .+++...+.++.++++++.+. +.+.++.+++.+++++.|.+++
T Consensus 265 v~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~aa~~aal~~~~~~---~~~~~~~~~~~~~l~~~L~~~g 328 (409)
T 3kki_A 265 IWCNNEVNRCVPFISY-----------PAIFSSTLLPYEAAGLETTLEIIESA---DNRRQHLDRMARKLRIGLSQLG 328 (409)
T ss_dssp EEESSSGGGTHHHHCH-----------HHHHSBCCCHHHHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEECHHHHHHHHHhCc-----------CccccCCCcHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHcC
Confidence 9999888764422100 0111 235667788888899988764 6788888999999999998874
No 143
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.30 E-value=2e-10 Score=124.77 Aligned_cols=126 Identities=12% Similarity=0.111 Sum_probs=86.8
Q ss_pred CceEEE-Eecccccccccccc--------ccccCCCcEEEecccccCCC----cccc---cccc--eEEeccccccCCCc
Q psy8733 273 EASYLY-YCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR----KFDV---SKFG--VIIAGAQKNIGPAG 334 (621)
Q Consensus 273 ~t~~V~-~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~----pIDv---~~~g--vl~asaqK~lGP~G 334 (621)
++++|+ +++..|.||...+. +++++|+++|+|.+++.+.. +.++ +..+ +.+.|..|++| +|
T Consensus 216 ~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~~vi~~~S~SK~~~-~G 294 (448)
T 3aow_A 216 KVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTFSKILA-PG 294 (448)
T ss_dssp CEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTSCEEEEEESTTTTC-GG
T ss_pred CCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCCCEEEEccchhhcc-cc
Confidence 788885 56778899998873 34578999999999987542 2233 3333 77888899999 88
Q ss_pred --cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHH--HhhCCHHHHHHHHHHHHHHHHHHH
Q psy8733 335 --ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWI--KRQGGLAKMEQNSLQKSVLLYQEI 410 (621)
Q Consensus 335 --lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i--~~~gGl~~i~~r~~~la~~L~e~L 410 (621)
+|+++.++++++++... . .... .++|....+++.++|+.. .+ .++.+.++.+++.+++.+.|
T Consensus 295 lriG~v~~~~~l~~~l~~~-------~----~~~~-~~~~~~~q~a~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~L 360 (448)
T 3aow_A 295 FRIGWMVGDPGIIRKMEIA-------K----QSTD-LCTNVFGQVVAWRYVDGGYLEK--HIPEIRKFYKPRRDAMLEAL 360 (448)
T ss_dssp GCCEEEEECHHHHHHHHHH-------H----HHHH-SSCCHHHHHHHHHHHHTTHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_pred ccEEEEEeCHHHHHHHHHH-------H----HHhc-CCCCHHHHHHHHHHHHhCCHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 79999999988765320 0 0111 234555566655555431 12 36777888888889999999
Q ss_pred Hcc
Q psy8733 411 DNS 413 (621)
Q Consensus 411 ~~~ 413 (621)
++.
T Consensus 361 ~~~ 363 (448)
T 3aow_A 361 EEF 363 (448)
T ss_dssp HHH
T ss_pred HHh
Confidence 863
No 144
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.29 E-value=1e-10 Score=123.74 Aligned_cols=131 Identities=15% Similarity=0.231 Sum_probs=88.6
Q ss_pred CCceEEE-Eecccccccccccc--------ccccCCCcEEEecccccCCC----ccccccc---c--eEEeccccccCCC
Q psy8733 272 PEASYLY-YCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR----KFDVSKF---G--VIIAGAQKNIGPA 333 (621)
Q Consensus 272 ~~t~~V~-~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~----pIDv~~~---g--vl~asaqK~lGP~ 333 (621)
+++++|. +++..|.+|...|. +++++|+++|+|.+++.+.. +.++..+ + +++.|.+|++| +
T Consensus 173 ~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~ 251 (407)
T 2zc0_A 173 QKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKVLG-T 251 (407)
T ss_dssp CCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTTTC-T
T ss_pred CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccccC-C
Confidence 3688874 66778899998874 34578999999999987543 2333333 3 67778899999 6
Q ss_pred c--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHH-Hh-hCCHHHHHHHHHHHHHHHHHH
Q psy8733 334 G--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWI-KR-QGGLAKMEQNSLQKSVLLYQE 409 (621)
Q Consensus 334 G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i-~~-~gGl~~i~~r~~~la~~L~e~ 409 (621)
| +|+++.++++.+++... .....+. ++.....++..+++.. .+ . .++.+.++.+++.+++.+.
T Consensus 252 G~r~G~~~~~~~~~~~~~~~-----------~~~~~~~-~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 318 (407)
T 2zc0_A 252 GFRIGWIIAEGEILKKVLMQ-----------KQPIDFC-APAISQYIALEYLKRGYFEKY-HLEGALLGYKEKRDIMLKA 318 (407)
T ss_dssp TSCCEEEECCHHHHHHHHHH-----------HTTTTSS-SCHHHHHHHHHHHHTTHHHHH-TTTTHHHHHHHHHHHHHHH
T ss_pred CcceEEEecCHHHHHHHHHH-----------HHhhcCC-CCHHHHHHHHHHHHcCCchHH-HHHHHHHHHHHHHHHHHHH
Confidence 7 79999999887765321 0111222 3444555555555543 12 3 5778888889999999999
Q ss_pred HHcc-CCc
Q psy8733 410 IDNS-DKF 416 (621)
Q Consensus 410 L~~~-~g~ 416 (621)
|++. +|+
T Consensus 319 L~~~~~~~ 326 (407)
T 2zc0_A 319 LENHLPNA 326 (407)
T ss_dssp HHHHCTTS
T ss_pred HHHhCCCC
Confidence 9873 443
No 145
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.29 E-value=3.5e-11 Score=127.24 Aligned_cols=126 Identities=9% Similarity=0.024 Sum_probs=87.7
Q ss_pred CCCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCccccccc--ceEEeccccccC-CCcc--EEEEE
Q psy8733 271 DPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKF--GVIIAGAQKNIG-PAGI--TVVIV 340 (621)
Q Consensus 271 ~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~--gvl~asaqK~lG-P~Gl--g~liv 340 (621)
++++++|.+++..+.+|...|+ +++++|+++|+|.+++.+..+.++ ++ ++++.|.+|++| |.|. |+++.
T Consensus 135 ~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~-~~~~di~~~s~sK~~~~~~~~~~G~~~~ 213 (386)
T 1cs1_A 135 AEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNPL-ALGADLVLHSCTKYLNGHSDVVAGVVIA 213 (386)
T ss_dssp HTCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGG-GGTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred ccCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCcc-ccCceEEEEcCcccccCCCCceeEEEEe
Confidence 3578999999999999999985 456899999999999998875444 34 489999999996 6664 99999
Q ss_pred ch-hHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCC
Q psy8733 341 RE-DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDK 415 (621)
Q Consensus 341 r~-~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g 415 (621)
++ ++.+++.+. .. ..-++++....+++..+++++. ...++..+..+.+.+.|.+++.
T Consensus 214 ~~~~l~~~l~~~-------~~-----~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~l~~~l~~~~~ 271 (386)
T 1cs1_A 214 KDPDVVTELAWW-------AN-----NIGVTGGAFDSYLLLRGLRTLV------PRMELAQRNAQAIVKYLQTQPL 271 (386)
T ss_dssp SSHHHHHHHHHH-------HH-----HHTCBCCHHHHHHHHHHHTTHH------HHHHHHHHHHHHHHHHHTTCTT
T ss_pred CcHHHHHHHHHH-------HH-----hcCCCCCHHHHHHHHhcccHHH------HHHHHHHHHHHHHHHHHhcCCC
Confidence 87 676655321 00 0113455555555555665543 3344455566777777777653
No 146
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.27 E-value=5e-11 Score=129.05 Aligned_cols=126 Identities=10% Similarity=0.018 Sum_probs=88.3
Q ss_pred CCCCceEEEEecccccccccccc-----cccc--CCCcEEEecccccC--CCcccccccceEEeccccccCCCc---cEE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDS--QGIPLVSDMSSNFL--SRKFDVSKFGVIIAGAQKNIGPAG---ITV 337 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~--~g~llvvDavSs~G--~~pIDv~~~gvl~asaqK~lGP~G---lg~ 337 (621)
+++++++|++++..|.+|..+|+ ++++ +|+++|+|.+++.+ ..|+++ ..|+++.|+||++|++| .|+
T Consensus 164 i~~~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~~~-g~Div~~S~sK~lg~~g~~~~G~ 242 (415)
T 2fq6_A 164 LQPNTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDF-GIDVSIQAATKYLVGHSDAMIGT 242 (415)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGG-TCSEEEEETTTTTTCSSSCCCEE
T ss_pred hccCCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCcccccCCcccc-CCeEEEEeCccccCCCCCceEEE
Confidence 56789999999999999999996 4568 99999999999954 456643 23599999999999887 699
Q ss_pred EEEchhHHhhhCCCCCceeeccccccCCCccC-CchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCC
Q psy8733 338 VIVREDLLEYALPITPTVFHFKINADNNSVYN-TPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDK 415 (621)
Q Consensus 338 livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~-TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g 415 (621)
++.++++++++.. +. ..++ +++....+.+..+++++. ...++..+.+..+.+.|.+.+.
T Consensus 243 l~~~~~~~~~l~~-------~~------~~~G~~~~~~~a~~~~~~l~~l~------~r~~~~~~n~~~l~~~L~~~~~ 302 (415)
T 2fq6_A 243 AVCNARCWEQLRE-------NA------YLMGQMVDADTAYITSRGLRTLG------VRLRQHHESSLKVAEWLAEHPQ 302 (415)
T ss_dssp EEECTTTHHHHHH-------HH------HHTTCCCCHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHTCTT
T ss_pred EEeCHHHHHHHHH-------HH------HhcCCCCCHHHHHHHHhhhhHHH------HHHHHHHHHHHHHHHHHHcCCC
Confidence 9999888766532 11 0112 223333444445555543 3345556667778888887653
No 147
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.24 E-value=8.1e-11 Score=121.57 Aligned_cols=75 Identities=21% Similarity=0.267 Sum_probs=53.9
Q ss_pred CceEEEEecccccc-cccccc--------ccccCCCcEEEecccccCC---Cccccc----ccceEEeccccccC-CCcc
Q psy8733 273 EASYLYYCDNETVD-GVEFNY--------IPDSQGIPLVSDMSSNFLS---RKFDVS----KFGVIIAGAQKNIG-PAGI 335 (621)
Q Consensus 273 ~t~~V~~thnET~t-Gv~~p~--------i~~~~g~llvvDavSs~G~---~pIDv~----~~gvl~asaqK~lG-P~Gl 335 (621)
++++|++++..+.+ |...|. +++++|+++++|.++.++. .+.+.. ..|.++.+.||++| |.|
T Consensus 132 ~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~~~G- 210 (347)
T 1jg8_A 132 RTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCAPVG- 210 (347)
T ss_dssp CEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCCSSC-
T ss_pred CceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCCCce-
Confidence 68999999998888 998773 3457899999999875532 122332 34566778999997 544
Q ss_pred EEEEEchhHHhhh
Q psy8733 336 TVVIVREDLLEYA 348 (621)
Q Consensus 336 g~livr~~ll~~~ 348 (621)
++++.++++++++
T Consensus 211 ~~~~~~~~~~~~~ 223 (347)
T 1jg8_A 211 SVVVGDRDFIERA 223 (347)
T ss_dssp EEEEECHHHHHHH
T ss_pred EEEEcCHHHHHHH
Confidence 3666788777654
No 148
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.21 E-value=9.6e-11 Score=126.75 Aligned_cols=133 Identities=17% Similarity=0.155 Sum_probs=98.9
Q ss_pred CCCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC---ccccc-----ccc--eEEeccccccC
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR---KFDVS-----KFG--VIIAGAQKNIG 331 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~---pIDv~-----~~g--vl~asaqK~lG 331 (621)
+++++++|.+++..|.||...+. +++++|+++|+|.+++.+.. ...+. .++ +++.|.+|++|
T Consensus 198 l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~~ 277 (447)
T 3b46_A 198 ITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSFA 277 (447)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHTT
T ss_pred hccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhcC
Confidence 45689999999999999998752 34679999999999986331 12221 233 88999999999
Q ss_pred CCc--cEEEEE-chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHH
Q psy8733 332 PAG--ITVVIV-REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQ 408 (621)
Q Consensus 332 P~G--lg~liv-r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e 408 (621)
++| +|+++. ++++++.+.. .. .....+++....+++.++|+.....+.++.+.++.+++.+++++
T Consensus 278 ~~G~riG~~~~~~~~l~~~l~~-------~~-----~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~ 345 (447)
T 3b46_A 278 ATGWRIGWVLSLNAELLSYAAK-------AH-----TRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTS 345 (447)
T ss_dssp CTTSCCEEEECSCHHHHHHHHH-------HH-----HHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CcchhhEEEEeCCHHHHHHHHH-------HH-----hhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHH
Confidence 889 999999 8888776531 00 11223556667778888888764342488899999999999999
Q ss_pred HHHccC
Q psy8733 409 EIDNSD 414 (621)
Q Consensus 409 ~L~~~~ 414 (621)
.|++++
T Consensus 346 ~L~~~g 351 (447)
T 3b46_A 346 IFDELG 351 (447)
T ss_dssp HHHHHT
T ss_pred HHHHCC
Confidence 999873
No 149
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.20 E-value=1.6e-10 Score=123.05 Aligned_cols=131 Identities=11% Similarity=0.104 Sum_probs=83.9
Q ss_pred Cce-EEEEecc-cccccccccc-----c---cc------cCCCcEEEecccccCCCc------c--ccccc--c---eEE
Q psy8733 273 EAS-YLYYCDN-ETVDGVEFNY-----I---PD------SQGIPLVSDMSSNFLSRK------F--DVSKF--G---VII 323 (621)
Q Consensus 273 ~t~-~V~~thn-ET~tGv~~p~-----i---~~------~~g~llvvDavSs~G~~p------I--Dv~~~--g---vl~ 323 (621)
+++ ++.+++. .|.||...+. + ++ ++|+++|+|.+.+-.... + ..... + +++
T Consensus 178 ~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 257 (418)
T 3rq1_A 178 QTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPKEILTCVC 257 (418)
T ss_dssp CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCTTEEEEEE
T ss_pred CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCCCceEEEE
Confidence 455 6677766 7899999884 3 33 789999999985322211 0 11112 1 667
Q ss_pred eccccccCCCc--cEEEEE---chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHH------HhhCCH
Q psy8733 324 AGAQKNIGPAG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWI------KRQGGL 392 (621)
Q Consensus 324 asaqK~lGP~G--lg~liv---r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i------~~~gGl 392 (621)
.|.+|.+|.+| +|+++. ++++.+++... .... ....+.+++..+..++..+++.. .+ .+
T Consensus 258 ~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~--~~ 327 (418)
T 3rq1_A 258 YSLSKGFTMYGQRVGAMIGISDDEEIADEFFEV-------NKST-SRATWSNICRPAMRTMANIVADPAKFKEYEA--ER 327 (418)
T ss_dssp EESTTTTTCCSSCCEEEEEEESSHHHHHHHHHH-------HHHH-HHHHTSSCCHHHHHHHHHHHTCHHHHHHHHH--HH
T ss_pred EeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHH-------HHHH-HhhccCCCchHHHHHHHHHhCCHHHHHHHHH--HH
Confidence 89999999777 688888 88887765321 0000 01123456677777776666422 22 25
Q ss_pred HHHHHHHHHHHHHHHHHHHcc
Q psy8733 393 AKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 393 ~~i~~r~~~la~~L~e~L~~~ 413 (621)
+.+.++.+++.+++++.|+++
T Consensus 328 ~~~~~~~~~~~~~l~~~L~~~ 348 (418)
T 3rq1_A 328 NCYYQLIRDRADIFKQEAAQV 348 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhc
Confidence 567788888888999988876
No 150
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.20 E-value=1.7e-09 Score=115.95 Aligned_cols=132 Identities=14% Similarity=0.132 Sum_probs=91.6
Q ss_pred CCceEEEE-ecccccccccccc--------ccccCCCcEEEecccc---c-CCCccccc---ccc--eEEeccccccCCC
Q psy8733 272 PEASYLYY-CDNETVDGVEFNY--------IPDSQGIPLVSDMSSN---F-LSRKFDVS---KFG--VIIAGAQKNIGPA 333 (621)
Q Consensus 272 ~~t~~V~~-thnET~tGv~~p~--------i~~~~g~llvvDavSs---~-G~~pIDv~---~~g--vl~asaqK~lGP~ 333 (621)
+++++|++ ++..|.||...+. +++++|+++|+|.+++ + |..+.++. ..+ +++.|.+|++| +
T Consensus 189 ~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~ 267 (425)
T 2r2n_A 189 NTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-S 267 (425)
T ss_dssp CCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-S
T ss_pred CCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-C
Confidence 46788876 5667888999873 3457899999999997 3 22233333 233 77889999999 8
Q ss_pred c--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhh---CCHHHHHHHHHHHHHHHHH
Q psy8733 334 G--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQ---GGLAKMEQNSLQKSVLLYQ 408 (621)
Q Consensus 334 G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~---gGl~~i~~r~~~la~~L~e 408 (621)
| +|+++.++++++++.. . ......++|....+++.++|+.+.+. .-++.+.++.+++.+++.+
T Consensus 268 GlRiG~~~~~~~l~~~l~~-------~-----~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 335 (425)
T 2r2n_A 268 GLRIGFLTGPKPLIERVIL-------H-----IQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILA 335 (425)
T ss_dssp TTCCEEEEEEHHHHHHHHH-------H-----HHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEecCHHHHHHHHH-------H-----HHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 8 6999999998876532 0 01123466777777877887764321 0266777888888888999
Q ss_pred HHHc-cCCc
Q psy8733 409 EIDN-SDKF 416 (621)
Q Consensus 409 ~L~~-~~g~ 416 (621)
.|++ ++|+
T Consensus 336 ~L~~~~~~~ 344 (425)
T 2r2n_A 336 AADKWLTGL 344 (425)
T ss_dssp HHHHHCSSS
T ss_pred HHHHHCCCC
Confidence 8887 4443
No 151
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.18 E-value=3e-10 Score=120.70 Aligned_cols=128 Identities=10% Similarity=0.080 Sum_probs=88.7
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCccccc-ccceEEeccccccC-CCc--cEEEEE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVS-KFGVIIAGAQKNIG-PAG--ITVVIV 340 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~-~~gvl~asaqK~lG-P~G--lg~liv 340 (621)
+++++++|.+++..|.+|...|+ +++++|+++|+|.+++.+..+..++ ..++++.|.+|++| |.+ .|+++.
T Consensus 146 i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g~~~~G~~~~ 225 (398)
T 2rfv_A 146 MRPETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHGDVIGGIIVG 225 (398)
T ss_dssp CCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred cCCCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCCCceEEEEEE
Confidence 45689999999999999999995 4568999999999999887543221 13488999999996 655 599999
Q ss_pred chhHHh-hhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 341 REDLLE-YALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 341 r~~ll~-~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
++++++ .+.+ + .. ..+.++++....+++.++++.+ +...++..+.++.+.+.|.+.+
T Consensus 226 ~~~~~~~~~~~----~---~~----~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~l~~~l~~~~ 283 (398)
T 2rfv_A 226 KQEFIDQARFV----G---LK----DITGGCMSPFNAWLTLRGVKTL------GIRMERHCENALKIARFLEGHP 283 (398)
T ss_dssp CHHHHHHHHHT----H---HH----HTTCCCCCHHHHHHHHHHHTTH------HHHHHHHHHHHHHHHHHHHTCT
T ss_pred CHHHHHHHHHH----H---HH----hCCCCCCCHHHHHHHHhhhhhH------HHHHHHHHHHHHHHHHHHHcCC
Confidence 998876 3322 0 00 0002456666667766666533 3334445556677778887765
No 152
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.18 E-value=8.4e-10 Score=118.21 Aligned_cols=74 Identities=8% Similarity=0.065 Sum_probs=58.0
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCcccccc--cceEEeccccccC-CCc-cEEEEE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSK--FGVIIAGAQKNIG-PAG-ITVVIV 340 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~--~gvl~asaqK~lG-P~G-lg~liv 340 (621)
+++++++|.+++..+.+|...|+ +++++|+++|+|.+++.+....+..+ .|+++.|.||++| |.| +|.+++
T Consensus 137 i~~~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~ 216 (412)
T 2cb1_A 137 LSAKTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVL 216 (412)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred hccCCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccccCCCCcEEEEEE
Confidence 45689999999999999999986 45678999999999998832222222 3499999999996 766 788887
Q ss_pred chh
Q psy8733 341 RED 343 (621)
Q Consensus 341 r~~ 343 (621)
+++
T Consensus 217 ~~~ 219 (412)
T 2cb1_A 217 SRE 219 (412)
T ss_dssp ECC
T ss_pred ecc
Confidence 763
No 153
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.17 E-value=1.2e-10 Score=123.65 Aligned_cols=134 Identities=12% Similarity=0.090 Sum_probs=94.1
Q ss_pred CCceEEEEecccccccccccc--------ccccCCCcEEEecc-cccCCC-------ccc-ccc-cc--eEEeccccccC
Q psy8733 272 PEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMS-SNFLSR-------KFD-VSK-FG--VIIAGAQKNIG 331 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDav-Ss~G~~-------pID-v~~-~g--vl~asaqK~lG 331 (621)
++++++.+++..|.||...+. +++++|+++|+|.+ +.++.. ++. +.. .+ +++.|.+|.+|
T Consensus 182 ~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 261 (412)
T 1ajs_A 182 EFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFG 261 (412)
T ss_dssp TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTSC
T ss_pred CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHhccCCcEEEEEecccccC
Confidence 467888899999999998763 34578999999999 545432 232 322 23 78899999999
Q ss_pred CCc--cEEEEE---chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHH-----hhCCHHHHHHHHHH
Q psy8733 332 PAG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK-----RQGGLAKMEQNSLQ 401 (621)
Q Consensus 332 P~G--lg~liv---r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~-----~~gGl~~i~~r~~~ 401 (621)
++| +|++++ ++++++.+.. . +... ....+.++|....+++.++|+... +. .++.+.++.++
T Consensus 262 ~~G~riG~~~~~~~~~~~~~~~~~---~---~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~-~~~~~~~~~~~ 332 (412)
T 1ajs_A 262 LYNERVGNLTVVAKEPDSILRVLS---Q---MQKI--VRVTWSNPPAQGARIVARTLSDPELFHEWTG-NVKTMADRILS 332 (412)
T ss_dssp CGGGCEEEEEEECSSHHHHHHHHH---H---HHHH--HHTTTSSCCSHHHHHHHHHHHSHHHHHHHHH-HHHHHHHHHHH
T ss_pred CCCcceEEEEEecCCHHHHHHHHH---H---HHHH--HhcccCCCChHHHHHHHHHHcCcchhHHHHH-HHHHHHHHHHH
Confidence 999 799999 7875443211 0 0000 123455667777778888887542 22 47888999999
Q ss_pred HHHHHHHHHHccC
Q psy8733 402 KSVLLYQEIDNSD 414 (621)
Q Consensus 402 la~~L~e~L~~~~ 414 (621)
+.+++++.|++++
T Consensus 333 ~~~~l~~~L~~~~ 345 (412)
T 1ajs_A 333 MRSELRARLEALK 345 (412)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhhC
Confidence 9999999998864
No 154
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.17 E-value=8.5e-10 Score=116.41 Aligned_cols=126 Identities=11% Similarity=0.150 Sum_probs=85.0
Q ss_pred CCCCceEEEEecccccccccc-c---c-----ccccCCCcEEEecccc-cC--CCccccccc----ceEEeccccccCCC
Q psy8733 270 RDPEASYLYYCDNETVDGVEF-N---Y-----IPDSQGIPLVSDMSSN-FL--SRKFDVSKF----GVIIAGAQKNIGPA 333 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~-p---~-----i~~~~g~llvvDavSs-~G--~~pIDv~~~----gvl~asaqK~lGP~ 333 (621)
+++++++|.++++....|+.. + + +++++|+++|+|.+++ ++ ..++.++.+ +++.+ +|.+| +
T Consensus 180 l~~~~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~t~--sK~~~-~ 256 (406)
T 4adb_A 180 IDDSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLLTT--AKALG-G 256 (406)
T ss_dssp CSTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEE--CGGGG-T
T ss_pred hcCCeEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEEEe--chhhc-C
Confidence 457899999997644444431 2 1 4568999999999996 32 223333333 25543 99998 5
Q ss_pred c--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 334 G--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 334 G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
| +|+++.++++.+.+.+. ..... .+++.....++.++++.+.+ +++.++.+++.+++++.|+
T Consensus 257 G~r~G~~~~~~~~~~~~~~~-----------~~~~~-~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~l~~~l~ 320 (406)
T 4adb_A 257 GFPVGALLATEECARVMTVG-----------THGTT-YGGNPLASAVAGKVLELINT----PEMLNGVKQRHDWFVERLN 320 (406)
T ss_dssp TSCCEEEEECHHHHHTCCTT-----------SSCCS-STTCHHHHHHHHHHHHHHSS----HHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEcHHHHhhhccC-----------CcCCC-CCCCHHHHHHHHHHHHHHHh----cCHHHHHHHHHHHHHHHHH
Confidence 6 99999999998765431 11122 34566677777788887643 5778888889999999888
Q ss_pred ccC
Q psy8733 412 NSD 414 (621)
Q Consensus 412 ~~~ 414 (621)
+++
T Consensus 321 ~~~ 323 (406)
T 4adb_A 321 TIN 323 (406)
T ss_dssp HHH
T ss_pred HHH
Confidence 753
No 155
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.17 E-value=2.1e-10 Score=122.74 Aligned_cols=129 Identities=11% Similarity=0.037 Sum_probs=93.8
Q ss_pred CceEEEEecccccccccccc--------cccc-----CCCcEEEecccccCC------Ccc--cccc---c---ceEEec
Q psy8733 273 EASYLYYCDNETVDGVEFNY--------IPDS-----QGIPLVSDMSSNFLS------RKF--DVSK---F---GVIIAG 325 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~--------i~~~-----~g~llvvDavSs~G~------~pI--Dv~~---~---gvl~as 325 (621)
++++|.+++..|+||...+. ++++ +|+++|+|.+++.+. .++ +++. - .+++.|
T Consensus 189 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 268 (430)
T 2x5f_A 189 DKVIMILNYPNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDG 268 (430)
T ss_dssp SEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEE
T ss_pred CCEEEEEcCCCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEe
Confidence 78999999999999999882 3457 899999999988532 132 3422 2 366889
Q ss_pred cccccCCCc--cEEEEE---chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHH----HHHhhCCHHHHH
Q psy8733 326 AQKNIGPAG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFA----WIKRQGGLAKME 396 (621)
Q Consensus 326 aqK~lGP~G--lg~liv---r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~----~i~~~gGl~~i~ 396 (621)
.+|++|++| +|++++ ++++++++.... ... ..+...++|....+++.++|+ |+.+ ++++.
T Consensus 269 ~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~-------~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~---~~~~~ 337 (430)
T 2x5f_A 269 ATKEFFAWGFRVGFMTFGTSDQTTKEVLEAKV-------KGL-IRSNISSGPLPTQSAVKHVLKNNKQFDKE---IEQNI 337 (430)
T ss_dssp HHHHTTCGGGCCEEEEEBCCCHHHHHHHHHHH-------HHH-HHTTTSSCCHHHHHHHHHHHHSCHHHHHH---HHHHH
T ss_pred cccCCCCCCCCeEEEEEecCCHHHHHHHHHHH-------hhh-hhcccCCCChHHHHHHHHHHccChHHHHH---HHHHH
Confidence 999999888 699999 988887653210 000 011345677888888888888 5433 57788
Q ss_pred HHHHHHHHHHHHHHHc
Q psy8733 397 QNSLQKSVLLYQEIDN 412 (621)
Q Consensus 397 ~r~~~la~~L~e~L~~ 412 (621)
++.+++.+++++.|++
T Consensus 338 ~~~~~~~~~l~~~L~~ 353 (430)
T 2x5f_A 338 QTLKERYEVTKEVVYA 353 (430)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8899999999998873
No 156
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.17 E-value=1.9e-10 Score=125.81 Aligned_cols=127 Identities=8% Similarity=0.010 Sum_probs=90.2
Q ss_pred CCCCc-eEEEEecccccccccccc-----ccccCCCcEEEecccccCCCccccccc--ceEEeccccccCCCc---cEEE
Q psy8733 270 RDPEA-SYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKF--GVIIAGAQKNIGPAG---ITVV 338 (621)
Q Consensus 270 i~~~t-~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~--gvl~asaqK~lGP~G---lg~l 338 (621)
+++++ ++|++++..|.+|...|+ +++++|+++|+|.+++.+..... .++ |+++.|.||++|+.| +|++
T Consensus 196 i~~~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~-~~~g~Div~~S~sK~~gg~gd~~~G~l 274 (445)
T 1qgn_A 196 LNQKKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKA-LALGADLVLHSATKFLGGHNDVLAGCI 274 (445)
T ss_dssp HHHSCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCT-TTTTCSEEEECTTTTTTCSSSCCCEEE
T ss_pred hccCCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccCCc-cccCCEEEEECCcccccccccceEEEE
Confidence 34578 999999999999999996 45689999999999987754322 234 499999999999888 9999
Q ss_pred EEchhHHhhhCCCCCceeeccccccCCCccC-CchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCc
Q psy8733 339 IVREDLLEYALPITPTVFHFKINADNNSVYN-TPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKF 416 (621)
Q Consensus 339 ivr~~ll~~~~~~~P~~ld~~~~~~~~s~~~-TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~ 416 (621)
+.++++++++.+ +. ..++ +++.+..+.+..+++.+. .+.+++.+.++++.+.|++.+++
T Consensus 275 ~~~~~l~~~l~~-------~~------~~~g~~~~~~~a~~~~~~l~~l~------~r~~~~~~~a~~l~~~L~~~p~v 334 (445)
T 1qgn_A 275 SGPLKLVSEIRN-------LH------HILGGALNPNAAYLIIRGMKTLH------LRVQQQNSTALRMAEILEAHPKV 334 (445)
T ss_dssp EECHHHHHHHHH-------HH------HHHCCCCCHHHHHHHHHHGGGHH------HHHHHHHHHHHHHHHHHHTCTTE
T ss_pred EECHHHHHHHHH-------HH------HHhCCCCCHHHHHHHHHhHHHHH------HHHHHHHHHHHHHHHHHhcCCCc
Confidence 999998876531 00 1122 344445455555555443 33445556678888999887754
No 157
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.17 E-value=3.2e-10 Score=119.29 Aligned_cols=261 Identities=13% Similarity=0.016 Sum_probs=149.5
Q ss_pred eeccCCCCCCCHHHHHHHHH-HHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCC-----CCC--EEEEEcCCc
Q psy8733 53 INFGAGPAKLPREVLEEVKE-TLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVP-----NNY--KILFLQGGG 124 (621)
Q Consensus 53 ~lf~aGPs~~P~~Vlea~~~-~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p-----~~y--eI~f~~ggg 124 (621)
|++.+++++++++|++++.+ .+.+....+. .. ..-..+.|+.++++++.. +.. +|+|+ +||
T Consensus 36 y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y-----~~-----~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t-~g~ 104 (397)
T 3fsl_A 36 YYNEDGIIPQLQAVAEAEARLNAQPHGASLY-----LP-----MEGLNCYRHAIAPLLFGADHPVLKQQRVATIQT-LGG 104 (397)
T ss_dssp CCCTTSCCCCCHHHHHHHHHHHHSCCCCCCC-----CC-----TTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEE-SHH
T ss_pred EECCCCCccCcHHHHHHHHhhccCccccccC-----CC-----CCchHHHHHHHHHHHhcCCcccccccceEEEEc-CCc
Confidence 55667788888999999998 7643211110 00 012346677777777542 223 67876 678
Q ss_pred chhhhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeeccccc
Q psy8733 125 TGMFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSK 204 (621)
Q Consensus 125 T~~~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~ 204 (621)
|+ +++++.. ...++.+||++.+..+++.+. ...++..|...+..+..
T Consensus 105 ~~-----a~~~~~~------------------------~~~~~~~gd~vl~~~p~~~~~--~~~~~~~g~~~~~~~~~-- 151 (397)
T 3fsl_A 105 SG-----ALKVGAD------------------------FLKRYFPESGVWVSDPTWENH--VAIFAGAGFEVSTYPWY-- 151 (397)
T ss_dssp HH-----HHHHHHH------------------------HHHHHCTTCCEEEESSCCHHH--HHHHHHTTCCEEEECCE--
T ss_pred HH-----HHHHHHH------------------------HHHhcCCCCeEEEeCCCchhH--HHHHHHcCCceEEEeee--
Confidence 88 3443211 223445666666665555543 45566677543322210
Q ss_pred ccccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccC-CCCCceEEEEeccc
Q psy8733 205 YVSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWN-RDPEASYLYYCDNE 283 (621)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~-i~~~t~~V~~thnE 283 (621)
.++...+++++++ +.+. ..++++++.+++.+
T Consensus 152 ----------------------------~~~~~~~d~~~l~--------------------~~l~~~~~~~~~v~~~~p~ 183 (397)
T 3fsl_A 152 ----------------------------DEATNGVRFNDLL--------------------ATLKTLQAGSIVLLHPCCH 183 (397)
T ss_dssp ----------------------------ETTTTEECHHHHH--------------------HHHTTCCTTCEEEECSSSC
T ss_pred ----------------------------eccCCcCcHHHHH--------------------HHHHhCCCCCEEEEeCCCC
Confidence 0001112222210 1111 12578899999889
Q ss_pred ccccccccc--------ccccCCCcEEEecccccCCCc-----ccc----cccc--eEEeccccccCCCc--cEEEEE--
Q psy8733 284 TVDGVEFNY--------IPDSQGIPLVSDMSSNFLSRK-----FDV----SKFG--VIIAGAQKNIGPAG--ITVVIV-- 340 (621)
Q Consensus 284 T~tGv~~p~--------i~~~~g~llvvDavSs~G~~p-----IDv----~~~g--vl~asaqK~lGP~G--lg~liv-- 340 (621)
|.||...+. +++++|+++|+|.+.+-+... ..+ +..+ +++.|..|.+|++| +|++++
T Consensus 184 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~riG~~~~~~ 263 (397)
T 3fsl_A 184 NPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVMC 263 (397)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTCGGGCCEEEEEEC
T ss_pred CCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccccCcCCCeeEEEEec
Confidence 999998763 345789999999997765532 111 1223 67778889999999 677765
Q ss_pred -chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHH-----HhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 341 -REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWI-----KRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 341 -r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i-----~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
+++.++++... .... ....+.+||.....++..+++.- .+. .++.+.++.+++.+++++.|++++
T Consensus 264 ~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~ 334 (397)
T 3fsl_A 264 EDAEAAGRVLGQ------LKAT--VRRNYSSPPNFGAQVVAAVLNDEALKASWLK-EVEEMRTRILAMRQELVKVLSTEM 334 (397)
T ss_dssp SSHHHHHHHHHH------HHHH--HHTTTSSCCSHHHHHHHHHHTSHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHH------HHHH--HHhccCCCCHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34444432110 0000 01234455555555555555421 022 478888999999999999998864
No 158
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.16 E-value=7.2e-10 Score=117.10 Aligned_cols=125 Identities=16% Similarity=0.178 Sum_probs=85.5
Q ss_pred CCCCceEEEEecccccccc-ccc---c-----ccccCCCcEEEecccc-cC--CCccccccc----ceEEeccccccC-C
Q psy8733 270 RDPEASYLYYCDNETVDGV-EFN---Y-----IPDSQGIPLVSDMSSN-FL--SRKFDVSKF----GVIIAGAQKNIG-P 332 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv-~~p---~-----i~~~~g~llvvDavSs-~G--~~pIDv~~~----gvl~asaqK~lG-P 332 (621)
+++++++|.+++..+.+|+ ..+ + +++++|+++|+|.+++ ++ ..++.++.+ |++.+ .|++| +
T Consensus 180 l~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~s~--sK~~~~G 257 (397)
T 2ord_A 180 MSEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKLFAYQKYGVVPDVLTT--AKGLGGG 257 (397)
T ss_dssp CCTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEE--CGGGGTT
T ss_pred hhcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccchhhhhhCCCCCeeee--ccccCCC
Confidence 4568999999999999998 443 2 3467899999999997 33 123444333 35544 69998 3
Q ss_pred CccEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc
Q psy8733 333 AGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN 412 (621)
Q Consensus 333 ~Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~ 412 (621)
-++|++++++++. .+.+ . ..... .++|....+++.++|+.+.+ +++.++.+++.+++++.|++
T Consensus 258 ~r~G~~~~~~~~~-~l~~---~--------~~~~~-~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~l~~~L~~ 320 (397)
T 2ord_A 258 VPIGAVIVNERAN-VLEP---G--------DHGTT-FGGNPLACRAGVTVIKELTK----EGFLEEVEEKGNYLMKKLQE 320 (397)
T ss_dssp SCCEEEEECSTTC-CCCT---T--------SSCCS-STTCHHHHHHHHHHHHHHTS----TTHHHHHHHHHHHHHHHHHH
T ss_pred cCeEEEEEchHhc-ccCC---C--------CcCCC-CCCCHHHHHHHHHHHHHHHh----CCHHHHHHHHHHHHHHHHHH
Confidence 3599999998864 3321 0 11122 35566777888888888754 35677788888888888876
Q ss_pred c
Q psy8733 413 S 413 (621)
Q Consensus 413 ~ 413 (621)
+
T Consensus 321 ~ 321 (397)
T 2ord_A 321 M 321 (397)
T ss_dssp H
T ss_pred H
Confidence 5
No 159
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.16 E-value=3.2e-10 Score=121.17 Aligned_cols=129 Identities=12% Similarity=0.123 Sum_probs=90.9
Q ss_pred CCceEEEEeccccccccccc---c-----ccccCCCcEEEecccccCC----Cccc---cc-c-------cc--eEEecc
Q psy8733 272 PEASYLYYCDNETVDGVEFN---Y-----IPDSQGIPLVSDMSSNFLS----RKFD---VS-K-------FG--VIIAGA 326 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p---~-----i~~~~g~llvvDavSs~G~----~pID---v~-~-------~g--vl~asa 326 (621)
+++++|.+|+..|.||...| + +++++|+++|+|.+++.+. ...+ +. + .| +++.|.
T Consensus 187 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~ 266 (428)
T 1iay_A 187 IKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSL 266 (428)
T ss_dssp CCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEES
T ss_pred CceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecc
Confidence 46899999999999999988 3 3457899999999998532 1122 22 1 35 788999
Q ss_pred ccccCCCcc--EEEEE-chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHH--hhCCHHHHHHHHHH
Q psy8733 327 QKNIGPAGI--TVVIV-REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK--RQGGLAKMEQNSLQ 401 (621)
Q Consensus 327 qK~lGP~Gl--g~liv-r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~--~~gGl~~i~~r~~~ 401 (621)
+|++|.+|+ |+++. ++++++.+.. . ..+.+++.....++..+++... +. .++.+.++.++
T Consensus 267 sK~~g~~Glr~G~~~~~~~~~~~~~~~-------~-------~~~~~~~~~~~~a~~~~l~~~~~~~~-~~~~~~~~~~~ 331 (428)
T 1iay_A 267 SKDMGLPGFRVGIIYSFNDDVVNCARK-------M-------SSFGLVSTQTQYFLAAMLSDEKFVDN-FLRESAMRLGK 331 (428)
T ss_dssp TTTSSCGGGCEEEEEESCHHHHHHHHH-------H-------HTTSCCCHHHHHHHHHHTTCHHHHHH-HHHHHHHHHHH
T ss_pred hhhcCCCCceEEEEEeCCHHHHHHHHH-------H-------HhcccCCHHHHHHHHHHhcChHHHHH-HHHHHHHHHHH
Confidence 999998885 99998 5777765431 0 1123455556666666665321 12 36788888899
Q ss_pred HHHHHHHHHHccCCc
Q psy8733 402 KSVLLYQEIDNSDKF 416 (621)
Q Consensus 402 la~~L~e~L~~~~g~ 416 (621)
+.+++++.|+++ |+
T Consensus 332 ~~~~l~~~L~~~-g~ 345 (428)
T 1iay_A 332 RHKHFTNGLEVV-GI 345 (428)
T ss_dssp HHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHhc-CC
Confidence 999999999887 34
No 160
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.15 E-value=3.8e-10 Score=120.49 Aligned_cols=128 Identities=10% Similarity=0.035 Sum_probs=85.9
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCccccccc--ceEEeccccccCCCc---cEEEE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKF--GVIIAGAQKNIGPAG---ITVVI 339 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~--gvl~asaqK~lGP~G---lg~li 339 (621)
+.+++++|++++..+.+|...|+ +++++|+++|+|.+++.+.. .+...+ |+++.|.+|++|++| .|+++
T Consensus 148 i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~~~~-~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~ 226 (392)
T 3qhx_A 148 IRPTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFASPAL-QQPLSLGADVVLHSTTKYIGGHSDVVGGALV 226 (392)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTT-CCGGGGTCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred hCCCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCccccc-CChHHhCCcEEEEcCccccCCCCCceEEEEE
Confidence 55789999999999999999986 45688999999999986532 222233 499999999999877 88888
Q ss_pred Ec-hhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCc
Q psy8733 340 VR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKF 416 (621)
Q Consensus 340 vr-~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~ 416 (621)
.+ +++.+++.. +.. ..-.+++....+++...++. ++...++..+.++.+.+.|++.+++
T Consensus 227 ~~~~~~~~~l~~-------~~~-----~~g~~~~~~~~~~~~~~l~~------l~~~~~~~~~~~~~l~~~L~~~~~v 286 (392)
T 3qhx_A 227 TNDEELDQSFAF-------LQN-----GAGAVPGPFDAYLTMRGLKT------LVLRMQRHSENAAAVAEFLAEHPAI 286 (392)
T ss_dssp ESCHHHHHHHHH-------HHH-----HHCCCCCHHHHHHHHHHHTT------HHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred ECcHHHHHHHHH-------HHH-----hcCCCCCHHHHHHHHhhhhH------HHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 88 466654421 000 01123333333333333332 4455666777788888888887643
No 161
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.15 E-value=2e-09 Score=115.13 Aligned_cols=129 Identities=13% Similarity=0.137 Sum_probs=88.4
Q ss_pred CCceEEEEecc-ccccccccc----c-----ccccCCCcEEEecccc-cCCC--ccccccc----ceEEeccccccC-C-
Q psy8733 272 PEASYLYYCDN-ETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLSR--KFDVSKF----GVIIAGAQKNIG-P- 332 (621)
Q Consensus 272 ~~t~~V~~thn-ET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~~--pIDv~~~----gvl~asaqK~lG-P- 332 (621)
+++++|.+.++ .+.+|+..+ + +++++|+++|+|.+++ +|.. ...++.+ +++.+| |.+| +
T Consensus 203 ~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~~~~~~~~~~d~~t~s--K~l~~G~ 280 (429)
T 1s0a_A 203 HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLFACEHAEIAPDILCLG--KALTGGT 280 (429)
T ss_dssp TTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTSS
T ss_pred CCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHHHhhhcCCCCCEEEec--ccccCCC
Confidence 46778888877 788898766 2 3467899999999998 6532 1222222 366665 9896 4
Q ss_pred CccEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc
Q psy8733 333 AGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN 412 (621)
Q Consensus 333 ~Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~ 412 (621)
.++|++++++++.+.+...... . .. .....++|..++.++.++++.+.+. .+.++.+++.+++++.|++
T Consensus 281 ~~iG~~~~~~~~~~~l~~~~~~-----~-~~-~~~t~~~n~~~~~a~~aal~~~~~~----~~~~~~~~~~~~l~~~L~~ 349 (429)
T 1s0a_A 281 MTLSATLTTREVAETISNGEAG-----C-FM-HGPTFMGNPLACAAANASLAILESG----DWQQQVADIEVQLREQLAP 349 (429)
T ss_dssp SCCEEEEECHHHHHHHHTSTTS-----S-CS-CCCTTTTCHHHHHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHGG
T ss_pred ccceEEEeCHHHHHHhhcCCCc-----c-cc-cCCCCCCCHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHH
Confidence 6799999999988766431100 0 00 1112356777888888999988763 4567778888899999887
Q ss_pred c
Q psy8733 413 S 413 (621)
Q Consensus 413 ~ 413 (621)
+
T Consensus 350 l 350 (429)
T 1s0a_A 350 A 350 (429)
T ss_dssp G
T ss_pred H
Confidence 5
No 162
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.15 E-value=1.2e-09 Score=120.60 Aligned_cols=131 Identities=11% Similarity=0.008 Sum_probs=94.0
Q ss_pred CceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC-----cccc----------ccc-c-eEEeccc
Q psy8733 273 EASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR-----KFDV----------SKF-G-VIIAGAQ 327 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~-----pIDv----------~~~-g-vl~asaq 327 (621)
++++|++++..|.||..++. +++++++++++|.+.+.+.. ..++ .+. . +++.|.+
T Consensus 237 ~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~S 316 (500)
T 3tcm_A 237 NVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVS 316 (500)
T ss_dssp EEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESS
T ss_pred CceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhccccCCeEEEEEecCC
Confidence 68899999999999999873 35678999999998765221 1221 111 2 5567889
Q ss_pred ccc-CCCc--cEEEEE---chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHH-----------HHHhhC
Q psy8733 328 KNI-GPAG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFA-----------WIKRQG 390 (621)
Q Consensus 328 K~l-GP~G--lg~liv---r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~-----------~i~~~g 390 (621)
|++ |++| +|++++ ++++++.+.. . .+...++++.+.+++..+++ |..+
T Consensus 317 K~~~g~~G~R~G~~~~~~~~~~~~~~l~~-------~------~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~-- 381 (500)
T 3tcm_A 317 KGYYGECGKRGGYFEITGFSAPVREQIYK-------I------ASVNLCSNITGQILASLVMNPPKASDESYASYKAE-- 381 (500)
T ss_dssp STTTCCGGGCCEEEEEESCCTTHHHHHHH-------H------HHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHHHH--
T ss_pred ccCCCCCccceEEEEEeCCCHHHHHHHHH-------H------HhcccCCCHHHHHHHHHHhcCccccchhHHHHHHH--
Confidence 999 8888 588887 7888766531 0 12345677888888888875 4443
Q ss_pred CHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 391 GLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 391 Gl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
++.+.++.+++++++++.|.+++|+...
T Consensus 382 -~~~~~~~l~~~~~~l~~~L~~~~g~~~~ 409 (500)
T 3tcm_A 382 -KDGILASLARRAKALEHAFNKLEGITCN 409 (500)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTSTTEECC
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCcEEe
Confidence 5788888999999999999988766543
No 163
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.14 E-value=1.9e-10 Score=122.01 Aligned_cols=103 Identities=8% Similarity=0.013 Sum_probs=72.2
Q ss_pred CCCceE-EEEeccccccc-ccccc-----ccccCCCcEEEecccccCCC-------cccccccceEEeccccccCCCccE
Q psy8733 271 DPEASY-LYYCDNETVDG-VEFNY-----IPDSQGIPLVSDMSSNFLSR-------KFDVSKFGVIIAGAQKNIGPAGIT 336 (621)
Q Consensus 271 ~~~t~~-V~~thnET~tG-v~~p~-----i~~~~g~llvvDavSs~G~~-------pIDv~~~gvl~asaqK~lGP~Glg 336 (621)
++++++ |++++..+.+| ...++ +++++|+++|+|.+++.+.. ++++ ..++++.|.||+++++++|
T Consensus 138 ~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~di~~~S~sK~l~g~~~G 216 (374)
T 2aeu_A 138 IDKDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKL-GADLVVTSTDKLMEGPRGG 216 (374)
T ss_dssp CCTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHH-TCSEEEEETTSSSSSCSCE
T ss_pred CCCccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcccc-CCcEEEecCcccccCcceE
Confidence 457899 99988888889 56664 45678999999998876531 2221 1248899999999656899
Q ss_pred EEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHH
Q psy8733 337 VVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWI 386 (621)
Q Consensus 337 ~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i 386 (621)
+++.++++++++... .. ....+++....+++..+++.+
T Consensus 217 ~~~~~~~~~~~l~~~-------~~-----~~~~~~~~~~~~a~~~al~~~ 254 (374)
T 2aeu_A 217 LLAGKKELVDKIYIE-------GT-----KFGLEAQPPLLAGIYRALKNF 254 (374)
T ss_dssp EEEEEHHHHHHHHHH-------HH-----TTTCBCCHHHHHHHHHHHHHC
T ss_pred EEEECHHHHHHHHHh-------hc-----cccCCCCHHHHHHHHHHHHHH
Confidence 999999998766321 10 011256666777777777654
No 164
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.14 E-value=6.2e-10 Score=119.40 Aligned_cols=127 Identities=14% Similarity=0.184 Sum_probs=85.3
Q ss_pred CCceEEEEecccccccccccc--------ccccCCCcEEEecccccCC----Cccccc----c---------cc--eEEe
Q psy8733 272 PEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLS----RKFDVS----K---------FG--VIIA 324 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~----~pIDv~----~---------~g--vl~a 324 (621)
+++++|.+++..+.+|+..+. +++++|+++|+|.+++.+. ....+. + .+ +++.
T Consensus 190 ~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~ 269 (435)
T 3piu_A 190 LRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVY 269 (435)
T ss_dssp CCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEE
T ss_pred CCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEE
Confidence 478999999999999998874 3457899999999998522 112221 1 33 7788
Q ss_pred ccccccCCCc--cEEEEEc-hhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHH---HHHhhCCHHHHHHH
Q psy8733 325 GAQKNIGPAG--ITVVIVR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFA---WIKRQGGLAKMEQN 398 (621)
Q Consensus 325 saqK~lGP~G--lg~livr-~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~---~i~~~gGl~~i~~r 398 (621)
|.+|++|.+| +|+++.+ +++.+.+.. ...+.+++.....++.++++ |+.+ .++.+.++
T Consensus 270 s~sK~~g~~G~r~G~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~ 333 (435)
T 3piu_A 270 SLSKDLGLPGFRVGAIYSNDDMVVAAATK--------------MSSFGLVSSQTQHLLSAMLSDKKLTKN--YIAENHKR 333 (435)
T ss_dssp ESSSSSCCGGGCEEEEEESCHHHHHHHHH--------------HGGGSCCCHHHHHHHHHHHHCHHHHHH--HHHHHHHH
T ss_pred eeecccCCCceeEEEEEeCCHHHHHHHHH--------------HhhcCCCCHHHHHHHHHHhcChHHHHH--HHHHHHHH
Confidence 9999999777 6999985 455443311 01223334444445444544 4333 36778888
Q ss_pred HHHHHHHHHHHHHccC
Q psy8733 399 SLQKSVLLYQEIDNSD 414 (621)
Q Consensus 399 ~~~la~~L~e~L~~~~ 414 (621)
.+++.+++++.|.+.+
T Consensus 334 ~~~~~~~l~~~L~~~g 349 (435)
T 3piu_A 334 LKQRQKKLVSGLQKSG 349 (435)
T ss_dssp HHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhcC
Confidence 8889999999998863
No 165
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.14 E-value=2.7e-10 Score=120.99 Aligned_cols=128 Identities=9% Similarity=0.076 Sum_probs=88.1
Q ss_pred ceEEEEecccccccccccc--------ccccCCCcEEEecccccCC--------Ccc-cccc--c---c-eEEecccccc
Q psy8733 274 ASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLS--------RKF-DVSK--F---G-VIIAGAQKNI 330 (621)
Q Consensus 274 t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~--------~pI-Dv~~--~---g-vl~asaqK~l 330 (621)
+.++.+++.+|.||...+. +++++|+++|+|.+++-.. .++ ++.. - . +++.|.+|.+
T Consensus 177 ~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 256 (412)
T 1yaa_A 177 SIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNA 256 (412)
T ss_dssp CEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTS
T ss_pred CEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCCcceEEEeccCCCC
Confidence 4555569999999998873 3457899999999985321 133 3322 1 2 6678889999
Q ss_pred CCCc--cEEEE--E-----chh----HHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHH-----hhCCH
Q psy8733 331 GPAG--ITVVI--V-----RED----LLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK-----RQGGL 392 (621)
Q Consensus 331 GP~G--lg~li--v-----r~~----ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~-----~~gGl 392 (621)
||+| +|+++ . +++ +++++.. . ....+.++|....+++.++|+... +. .+
T Consensus 257 ~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~----------~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~-~~ 323 (412)
T 1yaa_A 257 GMYGERVGCFHLALTKQAQNKTIKPAVTSQLAK----------I--IRSEVSNPPAYGAKIVAKLLETPELTEQWHK-DM 323 (412)
T ss_dssp CCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHH----------H--HHTTTSSCCHHHHHHHHHHHHSHHHHHHHHH-HH
T ss_pred CCcCCcceEEEEEecCCCCCHHHHHHHHHHHHH----------H--HhhccCCCChHHHHHHHHHhCCHHHHHHHHH-HH
Confidence 9999 58888 6 455 4433211 0 112345667777777777776542 22 57
Q ss_pred HHHHHHHHHHHHHHHHHHHccC
Q psy8733 393 AKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 393 ~~i~~r~~~la~~L~e~L~~~~ 414 (621)
+++.++.+++.+++++.|++++
T Consensus 324 ~~~~~~~~~~~~~l~~~L~~~~ 345 (412)
T 1yaa_A 324 VTMSSRITKMRHALRDHLVKLG 345 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHhhC
Confidence 8899999999999999998864
No 166
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.14 E-value=3.7e-10 Score=121.84 Aligned_cols=133 Identities=12% Similarity=0.140 Sum_probs=88.8
Q ss_pred CCceEEEEeccccccccccc----c-----ccccCCCcEEEeccc-ccCC--Cccccccc----ceEEeccccccCCCc-
Q psy8733 272 PEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSS-NFLS--RKFDVSKF----GVIIAGAQKNIGPAG- 334 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavS-s~G~--~pIDv~~~----gvl~asaqK~lGP~G- 334 (621)
+++++|.+.++.+.+|+..| + +++++|+++|+|.++ ++|. ....++.+ |++.+ .|++|+ |
T Consensus 218 ~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~s~--sK~l~~-G~ 294 (449)
T 3a8u_X 218 SNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMFGADSFGVTPDLMCI--AKQVTN-GA 294 (449)
T ss_dssp GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEE--CGGGGT-TS
T ss_pred CCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcchhhhhcCCCCCEEEE--cccccC-CC
Confidence 36788888888777898776 3 456899999999999 5763 22333333 35544 499985 7
Q ss_pred --cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc
Q psy8733 335 --ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN 412 (621)
Q Consensus 335 --lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~ 412 (621)
+|.+++++++.+.+...... -.... .....++ ++|..+.+++.++|+.+.+. .+.++.+++.+++++.|++
T Consensus 295 ~~~G~~~~~~~~~~~l~~~~~~-~~~~~-~~~~~t~-~~~~~~~aa~~aal~~~~~~----~~~~~~~~~~~~l~~~L~~ 367 (449)
T 3a8u_X 295 IPMGAVIASTEIYQTFMNQPTP-EYAVE-FPHGYTY-SAHPVACAAGLAALCLLQKE----NLVQSVAEVAPHFEKALHG 367 (449)
T ss_dssp SCCEEEEEEHHHHHHHHTCSSC-TTSCS-SCCCCTT-TTCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEECHHHHHHhhccCcc-ccccc-ccccCCC-cccHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHH
Confidence 99999999988776542110 00000 0112233 44566778888899988764 3567778888899999887
Q ss_pred cC
Q psy8733 413 SD 414 (621)
Q Consensus 413 ~~ 414 (621)
++
T Consensus 368 l~ 369 (449)
T 3a8u_X 368 IK 369 (449)
T ss_dssp TT
T ss_pred Hh
Confidence 54
No 167
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.14 E-value=1.2e-10 Score=124.44 Aligned_cols=126 Identities=11% Similarity=0.080 Sum_probs=86.3
Q ss_pred CCCCceEEEEecccccccccccc-----ccccC----CCcEEEecccccCCCcccccccc--eEEeccccccCCCc--c-
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQ----GIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIGPAG--I- 335 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~----g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lGP~G--l- 335 (621)
+++++++|++++..+.+|..+|+ +++++ |+++|+|.+++.+... ++.+++ +++.|.||++||+| +
T Consensus 135 i~~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~~-~~~~~~~di~~~S~sK~~g~~G~rig 213 (393)
T 1n8p_A 135 IKENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYIS-NPLNFGADIVVHSATKYINGHSDVVL 213 (393)
T ss_dssp SCSSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHHC-CGGGGTCSEEEEETTTTTTCSSCCCC
T ss_pred cccCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCccccccC-CHHHcCCeEEEEECcccccCCCCcee
Confidence 45679999999999999999996 45677 9999999999987653 444444 89999999999999 7
Q ss_pred EEEEEc-hhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 336 TVVIVR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 336 g~livr-~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
|+++.+ +++++++.+. .. ..+ .+++....+++..+++++ +...++..+.+..+.+.|.+.+
T Consensus 214 G~~~~~~~~~~~~l~~~-------~~--~~g---~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~l~~~L~~~~ 275 (393)
T 1n8p_A 214 GVLATNNKPLYERLQFL-------QN--AIG---AIPSPFDAWLTHRGLKTL------HLRVRQAALSANKIAEFLAADK 275 (393)
T ss_dssp EEEEESCHHHHHHHHHH-------HH--HHC---CCCCHHHHHHHHHHHTTH------HHHHHHHHHHHHHHHHHHTSCT
T ss_pred EEEEeCCHHHHHHHHHH-------HH--hcC---CCCCHHHHHHHHhccchH------HHHHHHHHHHHHHHHHHHHhCC
Confidence 888886 6777665321 00 001 233334444444555544 3334445556667777777654
No 168
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.09 E-value=1.5e-09 Score=116.05 Aligned_cols=133 Identities=16% Similarity=0.176 Sum_probs=85.8
Q ss_pred CCceEEEEecccccccccccc--------ccccCCCcEEEecccccCCCcc-----cc----cccc--eEEeccccccCC
Q psy8733 272 PEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSRKF-----DV----SKFG--VIIAGAQKNIGP 332 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~pI-----Dv----~~~g--vl~asaqK~lGP 332 (621)
++++++.+++..|.||+..+. +++++|+++|+|.+.+-+.... .+ +..+ +++.|..|.+|+
T Consensus 194 ~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 273 (420)
T 4f4e_A 194 PGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANLNVFVSSSFSKSFSL 273 (420)
T ss_dssp TTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTTTC
T ss_pred CCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCCCEEEEEeCCccCcC
Confidence 678999999999999998773 3457899999999875544321 11 1122 778899999999
Q ss_pred Cc--cEEEEE---chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHH-----hhCCHHHHHHHHHHH
Q psy8733 333 AG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK-----RQGGLAKMEQNSLQK 402 (621)
Q Consensus 333 ~G--lg~liv---r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~-----~~gGl~~i~~r~~~l 402 (621)
+| +|++++ ++++++++.. .+... ....+.++|.....++..+++... +. .++.+.++.+++
T Consensus 274 ~G~RiG~~~~~~~~~~~~~~~~~------~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-~~~~~~~~~~~~ 344 (420)
T 4f4e_A 274 YGERVGALSIITDSKDEAARVLS------QLKRV--IRTNYSNPPTHGGAIVAAVLASPELRASWVQ-ELGEMRDRIRAM 344 (420)
T ss_dssp GGGCEEEEEEECSSHHHHHHHHH------HHHHH--HHTTTSSCCSHHHHHHHHHHHCHHHHHHHHH-HHHHHHHHHHHH
T ss_pred cCCCcEEEEEEcCCHHHHHHHHH------HHHHH--HhcccCCCCHHHHHHHHHHhcCHHHHHHHHH-HHHHHHHHHHHH
Confidence 99 788764 3454433210 00000 012334455555555555444311 12 368888999999
Q ss_pred HHHHHHHHHcc
Q psy8733 403 SVLLYQEIDNS 413 (621)
Q Consensus 403 a~~L~e~L~~~ 413 (621)
.+++++.|+++
T Consensus 345 ~~~l~~~L~~~ 355 (420)
T 4f4e_A 345 RNGLVERLKAA 355 (420)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHhc
Confidence 99999999986
No 169
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.09 E-value=6e-09 Score=110.73 Aligned_cols=123 Identities=13% Similarity=0.126 Sum_probs=82.4
Q ss_pred CCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCC--Cccccccc----ceEEeccccccCCCc-
Q psy8733 272 PEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLS--RKFDVSKF----GVIIAGAQKNIGPAG- 334 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~--~pIDv~~~----gvl~asaqK~lGP~G- 334 (621)
+++++|.+.++.+.+|+..+ + +++++|+++|+|.+++ ++. ....++.+ +++ |..|++|+ |
T Consensus 198 ~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~~-Gl 274 (426)
T 1sff_A 198 EDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLT--TFAKSIAG-GF 274 (426)
T ss_dssp GGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTSCCSEE--EECGGGGT-SS
T ss_pred CceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchhhhhhcCCCCCEE--EEcccccC-CC
Confidence 36778887665444896655 2 4567899999999998 432 12223333 244 55699998 8
Q ss_pred -cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 335 -ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 335 -lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
+|++++++++++.+.+. ....+ .++|.....++.++|+++.+. .+.++.+++.+++++.|+++
T Consensus 275 riG~~~~~~~~~~~l~~~-----------~~~~~-~~~~~~~~~a~~aal~~~~~~----~~~~~~~~~~~~l~~~l~~~ 338 (426)
T 1sff_A 275 PLAGVTGRAEVMDAVAPG-----------GLGGT-YAGNPIACVAALEVLKVFEQE----NLLQKANDLGQKLKDGLLAI 338 (426)
T ss_dssp CCEEEEEEHHHHTTSCTT-----------SBCCS-SSSCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcHHHHhhhccC-----------CcCcC-CCCCHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHH
Confidence 59999999987654320 01122 345667778888899998763 34567777888888888764
No 170
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.08 E-value=2.6e-09 Score=113.05 Aligned_cols=128 Identities=14% Similarity=0.139 Sum_probs=80.4
Q ss_pred cCCCCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCCCccc-----ccccc--eEEeccccccCC
Q psy8733 268 WNRDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSRKFD-----VSKFG--VIIAGAQKNIGP 332 (621)
Q Consensus 268 l~i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~pID-----v~~~g--vl~asaqK~lGP 332 (621)
+.+++++++|.+++..|.||+..+. +++++|+++|+|.+++.+...+. .+..+ +++.|.+| ++.
T Consensus 175 l~~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK-~~~ 253 (417)
T 3g7q_A 175 LHIGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSEARPLWNPNIILCMSLSK-LGL 253 (417)
T ss_dssp CCCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESGG-GTC
T ss_pred hccccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccccccCCCCCEEEEEechh-ccC
Confidence 3356789999999999999999883 35689999999999874322221 12223 77889999 466
Q ss_pred Cc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHH----H-HHHHHHHHHHH
Q psy8733 333 AG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLA----K-MEQNSLQKSVL 405 (621)
Q Consensus 333 ~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~----~-i~~r~~~la~~ 405 (621)
+| +|+++.++++.+++... . ....+ +++.....++..+ +.+. .+. . +.++.+++.+.
T Consensus 254 ~G~r~G~~~~~~~~~~~~~~~-------~----~~~~~-~~~~~~~~~~~~~---l~~~-~~~~~~~~~~~~~~~~~~~~ 317 (417)
T 3g7q_A 254 PGSRCGIIIANDKTITAIANM-------N----GIISL-APGGMGPAMMCEM---IKRN-DLLRLSETVIKPFYYQRVQQ 317 (417)
T ss_dssp TTSCCEEEECCHHHHHHHHHH-------H----HHHCC-CCCSHHHHHHHHH---HHTT-CHHHHHHHTHHHHHHHHHHH
T ss_pred CCcceEEEEeCHHHHHHHHHh-------h----cceee-CCCcHHHHHHHHH---HcCc-chHHHHHHHHHHHHHHHHHH
Confidence 66 89999999888765320 0 01112 2333333333333 3322 332 2 55566777777
Q ss_pred HHHHHHc
Q psy8733 406 LYQEIDN 412 (621)
Q Consensus 406 L~e~L~~ 412 (621)
+++.|.+
T Consensus 318 ~~~~l~~ 324 (417)
T 3g7q_A 318 TIAIIRR 324 (417)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7787766
No 171
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.07 E-value=8.9e-10 Score=117.04 Aligned_cols=131 Identities=10% Similarity=0.123 Sum_probs=84.8
Q ss_pred Cce-EEEEecc-cccccccccc-----c---cc------cCCCcEEEecccc-cCCC-----cc--ccccc--c---eEE
Q psy8733 273 EAS-YLYYCDN-ETVDGVEFNY-----I---PD------SQGIPLVSDMSSN-FLSR-----KF--DVSKF--G---VII 323 (621)
Q Consensus 273 ~t~-~V~~thn-ET~tGv~~p~-----i---~~------~~g~llvvDavSs-~G~~-----pI--Dv~~~--g---vl~ 323 (621)
+++ ++.+++. .|.||...+. + ++ ++|+++|+|.+.. ++.. ++ ..... + +++
T Consensus 177 ~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 256 (413)
T 3t18_A 177 SDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRNLFVVVA 256 (413)
T ss_dssp CSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTTEEEEEE
T ss_pred CCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCCeeEEEE
Confidence 566 6667765 7899999884 2 33 7899999999843 2211 11 11112 1 667
Q ss_pred eccccccCCCc--cEEEEE---chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHH-----HhhCCHH
Q psy8733 324 AGAQKNIGPAG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWI-----KRQGGLA 393 (621)
Q Consensus 324 asaqK~lGP~G--lg~liv---r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i-----~~~gGl~ 393 (621)
.|.+|.+|.+| +|+++. ++++.+.+... .... ....+.+++..+..++..+++.. .+ .++
T Consensus 257 ~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~--~~~ 326 (413)
T 3t18_A 257 FSMSKSHTAYGLRSGAAVGISSSKEIIEEFEAS-------LAHS-ARCNWSNGTHAAQNILIELERAENKKIYEQ--ELV 326 (413)
T ss_dssp EEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHH-------HHHH-HHHHTSSCCHHHHHHHHHTTSHHHHHHHHH--HHH
T ss_pred EecCccCCCcCcCcEEEEEecCCHHHHHHHHHH-------HHHh-hhccccCCChHHHHHHHHHhcChHHHHHHH--HHH
Confidence 89999999888 799998 88887765321 0000 01123456677777776666432 12 256
Q ss_pred HHHHHHHHHHHHHHHHHHcc
Q psy8733 394 KMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 394 ~i~~r~~~la~~L~e~L~~~ 413 (621)
.+.++.+++.+++++.|+++
T Consensus 327 ~~~~~~~~~~~~l~~~l~~~ 346 (413)
T 3t18_A 327 DLRNMLKSRADVFVTAAKEN 346 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 77788888888999999887
No 172
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.07 E-value=1.2e-09 Score=114.82 Aligned_cols=133 Identities=14% Similarity=0.212 Sum_probs=89.3
Q ss_pred CceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC-------ccc-cccc-c--eEEeccccccCCC
Q psy8733 273 EASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR-------KFD-VSKF-G--VIIAGAQKNIGPA 333 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~-------pID-v~~~-g--vl~asaqK~lGP~ 333 (621)
+++++.+++..|.||...+. +++++|+++|+|.+++.... ++. ++.. + +++.|.+|.+|++
T Consensus 172 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 251 (396)
T 2q7w_A 172 GDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVASSYSXNFGLY 251 (396)
T ss_dssp TCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEEEECTTTTTCG
T ss_pred CCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEEEecccccccc
Confidence 57888889999999998873 34578999999999875432 222 2222 3 6788889999999
Q ss_pred c--cEEEEE---chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHH-----HhhCCHHHHHHHHHHHH
Q psy8733 334 G--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWI-----KRQGGLAKMEQNSLQKS 403 (621)
Q Consensus 334 G--lg~liv---r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i-----~~~gGl~~i~~r~~~la 403 (621)
| +|++++ +++.++.+.. . +... ....+.++|....+++.++|+.. .+. .++.+.++.+++.
T Consensus 252 G~riG~~~~~~~~~~~~~~~~~---~---~~~~--~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~-~~~~~~~~~~~~~ 322 (396)
T 2q7w_A 252 NERVGACTLVAADSETVDRAFS---Q---MKAA--IRANYSNPPAHGASVVATILSNDALRAIWEQ-ELTDMRQRIQRMR 322 (396)
T ss_dssp GGCCEEEEEECSSHHHHHHHHH---H---HHHH--HHTTTSSCCHHHHHHHHHHHTSHHHHHHHHH-HHHHC-CHHHHHH
T ss_pred ccccceEEEEcCCHHHHHHHHH---H---HHHH--HhhccCCCCcHHHHHHHHHhcChhhHHHHHH-HHHHHHHHHHHHH
Confidence 9 599997 5654433211 0 0000 11245566777777777777543 012 4777888889999
Q ss_pred HHHHHHHHccC
Q psy8733 404 VLLYQEIDNSD 414 (621)
Q Consensus 404 ~~L~e~L~~~~ 414 (621)
+++++.|++++
T Consensus 323 ~~l~~~L~~~~ 333 (396)
T 2q7w_A 323 QLFVNTLQEKG 333 (396)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHhcC
Confidence 99999998864
No 173
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.07 E-value=1.5e-08 Score=109.78 Aligned_cols=124 Identities=15% Similarity=0.229 Sum_probs=84.9
Q ss_pred CCCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCC--Cccccccc----ceEEeccccccCCCc
Q psy8733 271 DPEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLS--RKFDVSKF----GVIIAGAQKNIGPAG 334 (621)
Q Consensus 271 ~~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~--~pIDv~~~----gvl~asaqK~lGP~G 334 (621)
++++++|.+.++.+.+|+..+ + +++++|+++|+|.+++ +|- ..+.++.+ |++ +..|.+|+ |
T Consensus 221 ~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~~~~~~~~~~Di~--t~sK~l~~-G 297 (439)
T 2oat_A 221 DPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWLAVDYENVRPDIV--LLGKALSG-G 297 (439)
T ss_dssp STTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT-T
T ss_pred CCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcchhHHHhCCCCcEE--EecccccC-C
Confidence 356888888777667898662 2 4568999999999996 431 22222333 355 44599985 6
Q ss_pred ---cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 335 ---ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 335 ---lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
+|+++.++++.+.+.+. ....++ +.|.....+..++|+.+.++ .+.++.+++.+++++.|+
T Consensus 298 ~~~~G~v~~~~~~~~~l~~~-----------~~~~t~-~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~ 361 (439)
T 2oat_A 298 LYPVSAVLCDDDIMLTIKPG-----------EHGSTY-GGNPLGCRVAIAALEVLEEE----NLAENADKLGIILRNELM 361 (439)
T ss_dssp SSCCEEEEECHHHHTTSCTT-----------SSCCSS-TTCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEECHHHHhccCCC-----------CcccCC-CcCHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHH
Confidence 99999999987654320 122344 34455667777889988764 456777888899999998
Q ss_pred cc
Q psy8733 412 NS 413 (621)
Q Consensus 412 ~~ 413 (621)
++
T Consensus 362 ~l 363 (439)
T 2oat_A 362 KL 363 (439)
T ss_dssp TS
T ss_pred Hh
Confidence 76
No 174
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.07 E-value=9.3e-10 Score=118.01 Aligned_cols=78 Identities=12% Similarity=0.149 Sum_probs=58.3
Q ss_pred CCCCceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC-----cccccccc--eEEeccccccCCC-
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR-----KFDVSKFG--VIIAGAQKNIGPA- 333 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~-----pIDv~~~g--vl~asaqK~lGP~- 333 (621)
+++++++|.+++..+.||+.+|. +++++|+++|+|.+++.+.. ++.....+ +++.|.+|+ +.+
T Consensus 203 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G 281 (444)
T 3if2_A 203 KEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI-GLPG 281 (444)
T ss_dssp HTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT-TCGG
T ss_pred cCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhc-cCCC
Confidence 46789999999888999999883 35689999999999984322 22222223 888999997 544
Q ss_pred -ccEEEEEchhHHhhh
Q psy8733 334 -GITVVIVREDLLEYA 348 (621)
Q Consensus 334 -Glg~livr~~ll~~~ 348 (621)
++|+++.++++.+.+
T Consensus 282 ~r~G~~~~~~~l~~~~ 297 (444)
T 3if2_A 282 MRTGIIVADAKVIEAV 297 (444)
T ss_dssp GCCEEEECCHHHHHHH
T ss_pred CceEEEEECHHHHHHH
Confidence 478888898887765
No 175
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.06 E-value=1.5e-09 Score=117.48 Aligned_cols=134 Identities=8% Similarity=0.009 Sum_probs=89.1
Q ss_pred CCCCceEEEEec----ccccccccccc-----cccc--CCCcEEEecccccCCCccccccc--ceEEeccccccCCCc--
Q psy8733 270 RDPEASYLYYCD----NETVDGVEFNY-----IPDS--QGIPLVSDMSSNFLSRKFDVSKF--GVIIAGAQKNIGPAG-- 334 (621)
Q Consensus 270 i~~~t~~V~~th----nET~tGv~~p~-----i~~~--~g~llvvDavSs~G~~pIDv~~~--gvl~asaqK~lGP~G-- 334 (621)
+++++++|++++ ..+.+|...|+ ++++ +|+++++|.+.+.+....+..++ |+++.|.+|++|+.|
T Consensus 156 i~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~g~Div~~S~sK~lgg~~~~ 235 (409)
T 3jzl_A 156 MTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEVGADIIAGSLIKNPGGGLAK 235 (409)
T ss_dssp CCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGGTCSEEEEETTSGGGTTTCS
T ss_pred ccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccccCCccccCCeEEEECccccCCccCCc
Confidence 567899999998 78888999885 4567 89999999998877632233333 599999999997544
Q ss_pred -cEEEEEchhHHhhhCC--CCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 335 -ITVVIVREDLLEYALP--ITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 335 -lg~livr~~ll~~~~~--~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
.|+++.++++++++.. ..|.+ . . ....++.. ..+ +++-+.. ++.+.++..+.+.++.+.|+
T Consensus 236 ~GG~v~~~~~li~~l~~~~~~~~~---g--~---~~g~~~~~--~~~---~l~gl~~---~~~r~~~~~~~a~~la~~L~ 299 (409)
T 3jzl_A 236 TGGYIAGKEALVDLCGYRLTTPGI---G--R---EAGASLYS--LLE---MYQGFFL---APHVTAQAIKGARFTAAMLA 299 (409)
T ss_dssp SCEEEEECHHHHHHHHHHHSCTTT---G--G---GCCCCTTC--HHH---HHHHHHH---HHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCHHHHHHHHHHhccccc---c--c---cccccHHH--HHH---HHHHHhh---HHHHHHHHHHHHHHHHHHHH
Confidence 4999999999887643 11111 0 0 00111211 122 2333322 34566777888899999999
Q ss_pred ccCCcccCc
Q psy8733 412 NSDKFYECP 420 (621)
Q Consensus 412 ~~~g~~~~~ 420 (621)
+++ +.+.|
T Consensus 300 ~~g-~~v~p 307 (409)
T 3jzl_A 300 EFG-VEADP 307 (409)
T ss_dssp HTT-CEEES
T ss_pred hCC-CcccC
Confidence 986 55544
No 176
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.06 E-value=7.1e-09 Score=111.04 Aligned_cols=126 Identities=13% Similarity=0.141 Sum_probs=87.9
Q ss_pred CCCCceEEEEecccccccccccc-----cccc-CCCcEEEecccccCC--CcccccccceEEeccccccC-CCc--cEEE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDS-QGIPLVSDMSSNFLS--RKFDVSKFGVIIAGAQKNIG-PAG--ITVV 338 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~-~g~llvvDavSs~G~--~pIDv~~~gvl~asaqK~lG-P~G--lg~l 338 (621)
+++++++|.+++..|.+|...|+ ++++ +|+++|+|.+++.+. .|+++ ..++++.|.+|++| |.+ .|++
T Consensus 144 i~~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~~~~~~~-~~di~~~S~sK~~~~~g~ri~G~~ 222 (404)
T 1e5e_A 144 MKPNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMITNPVDF-GVDVVVHSATKYINGHTDVVAGLI 222 (404)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTTCCGGGG-TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred cCCCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhhCCcccc-CCEEEEEcCccccCCCCCCeEEEE
Confidence 45689999999999999999986 4578 999999999999887 45532 23489999999997 555 5999
Q ss_pred EEchhHHh-hhCCCCCceeeccccccCCCc-cCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 339 IVREDLLE-YALPITPTVFHFKINADNNSV-YNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 339 ivr~~ll~-~~~~~~P~~ld~~~~~~~~s~-~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
++++++++ ++.+... .. -.+++.+..+++..+++. ++.+.++..+.++.+.+.+++.+
T Consensus 223 ~~~~~~~~~~l~~~~~------------~~~g~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~l~~~l~~~~ 282 (404)
T 1e5e_A 223 CGKADLLQQIRMVGIK------------DITGSVISPHDAWLITRGLST------LNIRMKAESENAMKVAEYLKSHP 282 (404)
T ss_dssp EECHHHHHHHHHTCCC------------CCCCCCCCHHHHHHHHHHHTT------HHHHHHHHHHHHHHHHHHHHTCT
T ss_pred EECHHHHHHHHHHHHH------------hCCCCCCCHHHHHHHHHhHhH------HHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999887 6543211 11 123444444544445432 34445555666777777777764
No 177
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.06 E-value=1.9e-09 Score=114.82 Aligned_cols=132 Identities=10% Similarity=0.055 Sum_probs=93.7
Q ss_pred CCceEEEEecccccccccccccccc-CC--CcEEEecccccCC-Ccccccccc--eEEeccccccCCCcc--EEEEE-ch
Q psy8733 272 PEASYLYYCDNETVDGVEFNYIPDS-QG--IPLVSDMSSNFLS-RKFDVSKFG--VIIAGAQKNIGPAGI--TVVIV-RE 342 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~i~~~-~g--~llvvDavSs~G~-~pIDv~~~g--vl~asaqK~lGP~Gl--g~liv-r~ 342 (621)
+++++|.+++-.|.||...+.+.+. ++ +++|+|.+...+. .++.. ..+ +++.|.+|.+|++|+ |++++ ++
T Consensus 156 ~~~k~v~l~~p~NPtG~~~~~l~~~~~~~~~~ii~De~y~~~~~~~l~~-~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~ 234 (391)
T 3bwn_A 156 KGPYIELVTSPNNPDGTIRETVVNRPDDDEAKVIHDFAYYWPHYTPITR-RQDHDIMLFTFSKITGHAGSRIGWALVKDK 234 (391)
T ss_dssp CSCEEEEEESSCTTTCCCCCCCC-----CCCEEEEECTTCSTTTSCCCC-CBCCSEEEEEHHHHHSCGGGCEEEEEECCH
T ss_pred CCCEEEEECCCCCCCchhHHHHHHHhhcCCCEEEEeCCCCCCCCCcccc-CCCCeEEEEechhhcCCCccceEEEEecCH
Confidence 5789999999999999998865543 55 9999999887543 23432 233 889999999999996 99998 77
Q ss_pred hHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHH---------hhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 343 DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK---------RQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 343 ~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~---------~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
++++++.. .. .....++|.+...++..+|+.-. +. .++.+.++.+++.+++++.|+++
T Consensus 235 ~l~~~l~~-------~~-----~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~ 301 (391)
T 3bwn_A 235 EVAKKMVE-------YI-----IVNSIGVSKESQVRTAKILNVLKETCKSESESEN-FFKYGREMMKNRWEKLREVVKES 301 (391)
T ss_dssp HHHHHHHH-------HH-----HHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTS-HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHH-------Hh-----cccccCCCHHHHHHHHHHHhCcchhccccccHHH-HHHHHHHHHHHHHHHHHHHHHhC
Confidence 88766532 00 01123556666667667776432 22 47888999999999999999987
Q ss_pred CCcc
Q psy8733 414 DKFY 417 (621)
Q Consensus 414 ~g~~ 417 (621)
+|+.
T Consensus 302 ~~~~ 305 (391)
T 3bwn_A 302 DAFT 305 (391)
T ss_dssp SSEE
T ss_pred CCcc
Confidence 6554
No 178
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.04 E-value=5.9e-09 Score=111.91 Aligned_cols=125 Identities=15% Similarity=0.182 Sum_probs=83.1
Q ss_pred CCCCceEEEEeccccccccc-cc---c-----ccccCCCcEEEecccc-cCC--Cccccccc----ceEEeccccccCCC
Q psy8733 270 RDPEASYLYYCDNETVDGVE-FN---Y-----IPDSQGIPLVSDMSSN-FLS--RKFDVSKF----GVIIAGAQKNIGPA 333 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~-~p---~-----i~~~~g~llvvDavSs-~G~--~pIDv~~~----gvl~asaqK~lGP~ 333 (621)
+++++++|.++++.+.+|+. .+ + +++++|+++|+|.+++ ++- .++.++.+ |++.+ .|++| +
T Consensus 198 i~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~~~~~~~~diit~--sK~l~-~ 274 (420)
T 2pb2_A 198 MDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAYMHYGVTPDILTS--AKALG-G 274 (420)
T ss_dssp CCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEE--CGGGG-T
T ss_pred hccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHHHhcCCCCCeEEe--ccccc-C
Confidence 44679999998887777863 22 1 4568999999999996 331 12222222 36644 59998 3
Q ss_pred c--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 334 G--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 334 G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
| +|.+++++++.+.+.+. ....++ ++|....+++.++|+.+.+ +.+.++.+++.+++++.|+
T Consensus 275 G~~iG~~~~~~~l~~~l~~~-----------~~~~t~-~~~~~~~aa~~a~L~~~~~----~~~~~~~~~~~~~l~~~L~ 338 (420)
T 2pb2_A 275 GFPVSAMLTTQEIASAFHVG-----------SHGSTY-GGNPLACAVAGAAFDIINT----PEVLQGIHTKRQQFVQHLQ 338 (420)
T ss_dssp TSCCEEEEECHHHHTTCC---------------CCEE-CCCHHHHHHHHHHHHHHSS----HHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEhHHHHHhhcCC-----------CcCccc-CcCHHHHHHHHHHHHHHHh----ccHHHHHHHHHHHHHHHHH
Confidence 5 99999999877654320 112233 4455666777788887754 4667788888889998887
Q ss_pred cc
Q psy8733 412 NS 413 (621)
Q Consensus 412 ~~ 413 (621)
++
T Consensus 339 ~~ 340 (420)
T 2pb2_A 339 AI 340 (420)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 179
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.04 E-value=1.7e-08 Score=106.41 Aligned_cols=125 Identities=17% Similarity=0.237 Sum_probs=82.2
Q ss_pred CCCCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCCC--cccccccc----eEEeccccccC-C
Q psy8733 270 RDPEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLSR--KFDVSKFG----VIIAGAQKNIG-P 332 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~~--pIDv~~~g----vl~asaqK~lG-P 332 (621)
+++++++|.+.++.+.+|...+ + +++++|+++|+|.+++ +|.. +...+.++ ++.+| |.+| .
T Consensus 176 l~~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~t~s--K~~~~G 253 (395)
T 3nx3_A 176 VNEKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIMTSA--KALGCG 253 (395)
T ss_dssp CCTTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGTTT
T ss_pred ccCCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEEEec--ccccCC
Confidence 4567899999888888898876 2 4568899999999987 5432 23333333 55554 8885 4
Q ss_pred CccEEEEEchhH-HhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 333 AGITVVIVREDL-LEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 333 ~Glg~livr~~l-l~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
.++|+++.++++ .+.+.+. ....++ +.|..+..+..++++.+.+. .+.++.+++.+++++.|.
T Consensus 254 ~~~G~~~~~~~~~~~~~~~~-----------~~~~~~-~~~~~~~~aa~aal~~~~~~----~~~~~~~~~~~~~~~~l~ 317 (395)
T 3nx3_A 254 LSVGAFVINQKVASNSLEAG-----------DHGSTY-GGNPLVCAGVNAVFEIFKEE----KILENVNKLTPYLEQSLD 317 (395)
T ss_dssp SCCEEEEECHHHHHHHSCTT-----------CCSSCB-SCCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEchhhhhhhcCCc-----------ccCCCC-CCCHHHHHHHHHHHHHHHhh----HHHHHHHHHHHHHHHHHH
Confidence 578999999998 7665321 011223 34556667777888887654 334455555566666665
Q ss_pred c
Q psy8733 412 N 412 (621)
Q Consensus 412 ~ 412 (621)
+
T Consensus 318 ~ 318 (395)
T 3nx3_A 318 E 318 (395)
T ss_dssp H
T ss_pred H
Confidence 4
No 180
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.03 E-value=6.2e-08 Score=104.57 Aligned_cols=124 Identities=16% Similarity=0.252 Sum_probs=84.2
Q ss_pred CCCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCC--Cccccccc----ceEEeccccccCCCc
Q psy8733 271 DPEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLS--RKFDVSKF----GVIIAGAQKNIGPAG 334 (621)
Q Consensus 271 ~~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~--~pIDv~~~----gvl~asaqK~lGP~G 334 (621)
++++++|.+.++.+.+|+..+ + +++++|+++|+|.+++ +|- ..+.++.+ |++.+ .|++| .|
T Consensus 210 ~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~--sK~l~-~G 286 (433)
T 1z7d_A 210 DPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLLCVHHYNVKPDVILL--GKALS-GG 286 (433)
T ss_dssp STTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEE--CGGGG-TT
T ss_pred CCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcchhhHhcCCCCCEEEE--Ccccc-CC
Confidence 457888888887777898752 2 4568999999999997 432 12222332 35544 49998 47
Q ss_pred ---cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 335 ---ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 335 ---lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
+|+++.++++.+.+.+. ....++ +.|..+.++..++|+.+.+. .+.++.+++.+++++.|+
T Consensus 287 ~~~~G~v~~~~~~~~~l~~~-----------~~~~t~-~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~ 350 (433)
T 1z7d_A 287 HYPISAVLANDDIMLVIKPG-----------EHGSTY-GGNPLAASICVEALNVLINE----KLCENAEKLGGPFLENLK 350 (433)
T ss_dssp SSCCEEEEECHHHHTTCCTT-----------CCCCTT-TTCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEECHHHHhhhccc-----------cccccC-CCCHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHHHH
Confidence 99999999987654320 112334 44556677777889988764 356677788888888887
Q ss_pred cc
Q psy8733 412 NS 413 (621)
Q Consensus 412 ~~ 413 (621)
++
T Consensus 351 ~l 352 (433)
T 1z7d_A 351 RE 352 (433)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 181
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.02 E-value=3.3e-09 Score=113.77 Aligned_cols=126 Identities=15% Similarity=0.143 Sum_probs=86.7
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCC-CcEEEecccccCC--CcccccccceEEeccccccC-CCcc--EEE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQG-IPLVSDMSSNFLS--RKFDVSKFGVIIAGAQKNIG-PAGI--TVV 338 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g-~llvvDavSs~G~--~pIDv~~~gvl~asaqK~lG-P~Gl--g~l 338 (621)
+++++++|++++..|.+|...|+ +++++| +++|+|.+++.+. .|+++ ..++++.|.+|++| |.|+ |++
T Consensus 148 i~~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~~~~~~~~~-~~div~~S~sK~~~g~~~~~~G~v 226 (403)
T 3cog_A 148 ITPETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSPYFQRPLAL-GADISMYSATKYMNGHSDVVMGLV 226 (403)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCTTTCCTTTT-TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred cCcCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCcccccCCcccc-CCeEEEEcChhhccCCCCCeEEEE
Confidence 45689999999999999999996 456889 9999999999885 56653 23599999999996 7774 999
Q ss_pred EEc-hhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 339 IVR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 339 ivr-~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
+.+ +++.+++.+. .. ..-.+++.+..+++..+++++ +.+.++..+.+..+.+.+++.+
T Consensus 227 ~~~~~~l~~~l~~~-------~~-----~~g~~~~~~~~~~~~~~l~~l------~~r~~~~~~n~~~l~~~l~~~~ 285 (403)
T 3cog_A 227 SVNCESLHNRLRFL-------QN-----SLGAVPSPIDCYLCNRGLKTL------HVRMEKHFKNGMAVAQFLESNP 285 (403)
T ss_dssp EECCHHHHHHHHHH-------HH-----HHCCCCCHHHHHHHHHHHTTH------HHHHHHHHHHHHHHHHHHHTCT
T ss_pred EECcHHHHHHHHHH-------HH-----hcCCCCCHHHHHHHHhhhhHH------HHHHHHHHHHHHHHHHHHhcCC
Confidence 995 6776655320 00 011245555555555565544 3334445555666677776654
No 182
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.02 E-value=4.7e-09 Score=111.64 Aligned_cols=126 Identities=10% Similarity=0.070 Sum_probs=86.8
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCCCcEEEecccccCC--CcccccccceEEeccccccC-CCc--cEEEE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLS--RKFDVSKFGVIIAGAQKNIG-PAG--ITVVI 339 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~--~pIDv~~~gvl~asaqK~lG-P~G--lg~li 339 (621)
+++++++|++++..+.+|...|+ +++++|+++|+|.+++.+. .|+++ ..|+++.|.+|++| |.+ .|+++
T Consensus 141 i~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~~-~~di~~~S~sK~~~~~~~~~~G~v~ 219 (389)
T 3acz_A 141 WKPNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSPCFLKPLEL-GADIALHSVSKYINGHGDVIGGVSS 219 (389)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGT-TCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred cCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccccCcccc-CCeEEEECChhhccCCCCceeEEEE
Confidence 45689999999999999999996 4567899999999998766 56663 23589999999996 666 59999
Q ss_pred Ech-hHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 340 VRE-DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 340 vr~-~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
.++ ++++++.+.. . ..-.+++....+++..+++ .++...++..+.+..+.+.|++.+
T Consensus 220 ~~~~~~~~~l~~~~-------~-----~~g~~~~~~~~~~~~~~l~------~l~~r~~~~~~~~~~l~~~l~~~~ 277 (389)
T 3acz_A 220 AKTAEDIATIKFYR-------K-----DAGSLMAPMDAFLCARGMK------TLPIRMQIHMENGLKVAKFLEQHE 277 (389)
T ss_dssp ESSHHHHHHHHHHH-------H-----HHCCCCCHHHHHHHHHHHT------THHHHHHHHHHHHHHHHHHHHHCT
T ss_pred ECcHHHHHHHHHHH-------H-----hcCCCCCHHHHHHHHcCcc------HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 998 8877653210 0 0012233333333333333 244455666667778888888765
No 183
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.01 E-value=6.3e-08 Score=103.05 Aligned_cols=78 Identities=14% Similarity=0.215 Sum_probs=57.4
Q ss_pred CCCceEEEEe-cccccccccccc--------cc-ccCCCcEEEecccccC---C----Ccccc-------cccc--eEEe
Q psy8733 271 DPEASYLYYC-DNETVDGVEFNY--------IP-DSQGIPLVSDMSSNFL---S----RKFDV-------SKFG--VIIA 324 (621)
Q Consensus 271 ~~~t~~V~~t-hnET~tGv~~p~--------i~-~~~g~llvvDavSs~G---~----~pIDv-------~~~g--vl~a 324 (621)
++++++|+++ +..|.||...+. ++ +++|+++|+|.+++.+ . .+.++ +..+ +++.
T Consensus 170 ~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 249 (423)
T 3ez1_A 170 DPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFA 249 (423)
T ss_dssp CTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEE
T ss_pred CCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEe
Confidence 5689999755 667888998883 56 7899999999998832 1 12222 2334 7889
Q ss_pred ccccccC-CCccEEEEEchhHHhhh
Q psy8733 325 GAQKNIG-PAGITVVIVREDLLEYA 348 (621)
Q Consensus 325 saqK~lG-P~Glg~livr~~ll~~~ 348 (621)
|.+|+++ ..++|+++.++++++++
T Consensus 250 S~sK~~~~G~r~G~~~~~~~~~~~~ 274 (423)
T 3ez1_A 250 STSKITFAGAGLGFVASSEDNIRWL 274 (423)
T ss_dssp ESTTTSCSSSSCEEEEECHHHHHHH
T ss_pred CchhhccCCcceEEEEeCHHHHHHH
Confidence 9999764 56799999999988765
No 184
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.00 E-value=4e-09 Score=113.57 Aligned_cols=71 Identities=15% Similarity=0.080 Sum_probs=56.5
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCCCcEEEeccc-ccCC--CcccccccceEEeccccccCCCc--cEEEE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSS-NFLS--RKFDVSKFGVIIAGAQKNIGPAG--ITVVI 339 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavS-s~G~--~pIDv~~~gvl~asaqK~lGP~G--lg~li 339 (621)
+++++++|++++..|.+|...|+ +++++|+++|+|.++ ++|. .+++. ..|+++.|.+|++|.+| +|.++
T Consensus 141 i~~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~~~~~-~~Di~~~s~~K~l~~~g~~~G~~~ 219 (421)
T 2ctz_A 141 TDEKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLLRPLAW-GAALVTHSLTKWVGGHGAVIAGAI 219 (421)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSCCGGGG-TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred hccCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccCCcccc-CCeEEEECCcccccCCCCcEEEEE
Confidence 45689999999999999999996 456889999999999 8875 33322 13599999999997544 68787
Q ss_pred Ec
Q psy8733 340 VR 341 (621)
Q Consensus 340 vr 341 (621)
++
T Consensus 220 ~~ 221 (421)
T 2ctz_A 220 VD 221 (421)
T ss_dssp EE
T ss_pred Ee
Confidence 75
No 185
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.00 E-value=5.3e-09 Score=113.33 Aligned_cols=129 Identities=12% Similarity=0.198 Sum_probs=84.9
Q ss_pred CCceEEEEecccccccccccc--------ccccCCCcEEEecc-cccCCCcccc-----cc----c-c-eEEeccccccC
Q psy8733 272 PEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMS-SNFLSRKFDV-----SK----F-G-VIIAGAQKNIG 331 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDav-Ss~G~~pIDv-----~~----~-g-vl~asaqK~lG 331 (621)
++++++.+++..|.||+..+. +++++|+++|+|.+ +.++..+++. .. . + +++.|.+|.+|
T Consensus 201 ~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 280 (448)
T 3meb_A 201 EKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFG 280 (448)
T ss_dssp TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTSC
T ss_pred CCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccCC
Confidence 457888888888999998873 34578999999998 4455444321 11 1 2 67899999999
Q ss_pred CCc--cEEE--EE--------c-h----hHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHH-----hh
Q psy8733 332 PAG--ITVV--IV--------R-E----DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK-----RQ 389 (621)
Q Consensus 332 P~G--lg~l--iv--------r-~----~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~-----~~ 389 (621)
++| +|.+ +. . + ++.+.+. .. ....+.+||..+..++..+|+... ..
T Consensus 281 ~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~----------~~--~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~ 348 (448)
T 3meb_A 281 LYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMT----------LQ--IRKTWSMSAIHGAYIVQVIVHDKRLLQMFYD 348 (448)
T ss_dssp CGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHH----------HH--HHTTTSSCCHHHHHHHHHHHTSHHHHHHHHH
T ss_pred CccccceeeeeeeccccccccCCHHHHHHHHHHHH----------HH--HhcccCCccHHHHHHHHHHhcChHHHHHHHH
Confidence 888 7777 55 3 3 3332221 00 112344566666666666654211 01
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 390 GGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 390 gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
.++.+.++.+++.+++++.|.++
T Consensus 349 -~~~~~~~~~~~~r~~l~~~L~~~ 371 (448)
T 3meb_A 349 -NVKEMSARIHRMRSLLHASLAKR 371 (448)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhh
Confidence 36788899999999999999886
No 186
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.00 E-value=2.4e-09 Score=115.61 Aligned_cols=128 Identities=10% Similarity=0.063 Sum_probs=86.9
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCccccccc--ceEEeccccccCCCc---cEEEE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKF--GVIIAGAQKNIGPAG---ITVVI 339 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~--gvl~asaqK~lGP~G---lg~li 339 (621)
+++++++|++++..|.+|...|+ +++++|+++|+|.+++.+.....+ ++ ++++.|.+|++|++| .|+++
T Consensus 163 i~~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~-~~g~div~~S~sK~l~~~G~~~~G~vv 241 (414)
T 3ndn_A 163 LSVPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLLQQGF-PLGVDVVVYSGTKHIDGQGRVLGGAIL 241 (414)
T ss_dssp TSSCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCG-GGTCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred cCCCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCcccccCCch-hcCCCeEeccCCccccCCCCceEEEEE
Confidence 55689999999999999999885 456899999999999866432222 33 489999999999988 79999
Q ss_pred EchhHHh-hhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCc
Q psy8733 340 VREDLLE-YALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKF 416 (621)
Q Consensus 340 vr~~ll~-~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~ 416 (621)
.+++.+. ++.. +.. ..-.+++....+.+...+++ ++.+.+++.+.++.+.+.|++.+++
T Consensus 242 ~~~~~~~~~l~~-------~~~-----~~g~~~~~~~a~~~~~~l~~------l~~r~~~~~~~a~~l~~~L~~~p~v 301 (414)
T 3ndn_A 242 GDREYIDGPVQK-------LMR-----HTGPAMSAFNAWVLLKGLET------LAIRVQHSNASAQRIAEFLNGHPSV 301 (414)
T ss_dssp ECHHHHTTHHHH-------HHH-----HHCCCCCHHHHHHHHHHGGG------HHHHHHHHHHHHHHHHHHHHTCTTE
T ss_pred ECHHHHHHHHHH-------HHH-----HcCCCCCHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHhcCCCE
Confidence 9988765 2211 000 01122333333333334443 3445566677778888888887643
No 187
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=98.99 E-value=3.8e-09 Score=113.97 Aligned_cols=128 Identities=11% Similarity=0.073 Sum_probs=81.0
Q ss_pred CceEEEEecccccc-cccccc--------ccccCCCcEEEeccccc-----------CCCccccc--------ccceEEe
Q psy8733 273 EASYLYYCDNETVD-GVEFNY--------IPDSQGIPLVSDMSSNF-----------LSRKFDVS--------KFGVIIA 324 (621)
Q Consensus 273 ~t~~V~~thnET~t-Gv~~p~--------i~~~~g~llvvDavSs~-----------G~~pIDv~--------~~gvl~a 324 (621)
++++|.+++..+.+ |...+. +++++|+++|+|+++.+ +...+++. ..|+++.
T Consensus 183 ~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 262 (467)
T 1ax4_A 183 NIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYADALTM 262 (467)
T ss_dssp GEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCSEEEE
T ss_pred CeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccceEEE
Confidence 68999998888888 776652 45689999999998776 33444432 2457889
Q ss_pred ccccccCCC-ccEEEEEc-h-hHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Q psy8733 325 GAQKNIGPA-GITVVIVR-E-DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQ 401 (621)
Q Consensus 325 saqK~lGP~-Glg~livr-~-~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~ 401 (621)
|.||++|++ | |+++.+ + ++.+++....+.+ .....+++.+...+.++..+++.+.+ +...++..+
T Consensus 263 s~sK~~g~~~G-g~~~~~d~~~l~~~~~~~~~~~-------~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~ 330 (467)
T 1ax4_A 263 SAKKDPLLNIG-GLVAIRDNEEIFTLARQRCVPM-------EGFVTYGGLAGRDMAAMVQGLEEGTE----EEYLHYRIG 330 (467)
T ss_dssp ETTSTTCCSSC-EEEEESSCHHHHHHHHHHHHHH-------TCSTTTTTCCHHHHHHHHHHHHHTTC----HHHHHHHHH
T ss_pred eccccCCCCcc-eEEEeCCHHHHHHHHHhhcccc-------ccccccCCccchHHHHHHHHHHHhhh----hhHHHHHHH
Confidence 999999855 6 777777 5 6766543211100 11234556666666666666654322 122223345
Q ss_pred HHHHHHHHHHc
Q psy8733 402 KSVLLYQEIDN 412 (621)
Q Consensus 402 la~~L~e~L~~ 412 (621)
+.+++++.|.+
T Consensus 331 ~~~~l~~~L~~ 341 (467)
T 1ax4_A 331 QVKYLGDRLRE 341 (467)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 66788888877
No 188
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=98.96 E-value=1.6e-08 Score=108.48 Aligned_cols=123 Identities=17% Similarity=0.196 Sum_probs=81.3
Q ss_pred CCCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCC--Ccccccccc----eEEeccccccCCCc
Q psy8733 271 DPEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLS--RKFDVSKFG----VIIAGAQKNIGPAG 334 (621)
Q Consensus 271 ~~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~--~pIDv~~~g----vl~asaqK~lGP~G 334 (621)
.+++++|.+..+.+.+|...+ + +++++|+++|+|-+++ +|- .+..++.++ ++ +..|.+|+ |
T Consensus 199 ~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~~~~-G 275 (439)
T 3dxv_A 199 AGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL--VLGKGLGG-G 275 (439)
T ss_dssp TTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE--EECGGGGT-T
T ss_pred CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEE--EEcchhcC-C
Confidence 456889999888888899877 3 4568999999999986 321 122333332 55 44599974 5
Q ss_pred --cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc
Q psy8733 335 --ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN 412 (621)
Q Consensus 335 --lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~ 412 (621)
+|+++.++++.+.+.+. ....++ ++.....+..++++.+.+. .+.++.+++.+++++.|.+
T Consensus 276 ~riG~~~~~~~~~~~~~~~-----------~~~~t~--~~~~~~~aa~aal~~~~~~----~~~~~~~~~~~~~~~~l~~ 338 (439)
T 3dxv_A 276 LPLSAVIAPAEILDCASAF-----------AMQTLH--GNPISAAAGLAVLETIDRD----DLPAMAERKGRLLRDGLSE 338 (439)
T ss_dssp SCCEEEEEEHHHHTSCSSS-----------SCCTTT--TCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEECHHHHhhhcCC-----------CcCCCc--ccHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHH
Confidence 79999999988654321 112334 4556667777788887664 3455566666667776665
Q ss_pred c
Q psy8733 413 S 413 (621)
Q Consensus 413 ~ 413 (621)
+
T Consensus 339 ~ 339 (439)
T 3dxv_A 339 L 339 (439)
T ss_dssp H
T ss_pred H
Confidence 3
No 189
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=98.95 E-value=2.2e-08 Score=105.75 Aligned_cols=262 Identities=12% Similarity=0.043 Sum_probs=144.2
Q ss_pred ceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccccHHHHHHHHHHHHHHHHHhCCC------CCCEEEEE-cCCc
Q psy8733 52 VINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVP------NNYKILFL-QGGG 124 (621)
Q Consensus 52 ~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shrs~~f~~i~~~ar~~La~Ll~~p------~~yeI~f~-~ggg 124 (621)
.|++.++|.++.++|.+++.+...+....+ -.+. .-..+.|+.++++++.. .+ +|+|+ ++||
T Consensus 37 ~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~-----Y~~~-----~g~~~lr~~ia~~~~~~~~~~~~~~-~i~~v~t~G~ 105 (401)
T 7aat_A 37 AYRDDNGKPYVLNCVRKAEAMIAAKKMDKE-----YLPI-----AGLADFTRASAELALGENSEAFKSG-RYVTVQGISG 105 (401)
T ss_dssp SCCCTTSCCCCCHHHHHHHHHHHHTTCCCC-----CCCT-----TCCHHHHHHHHHHHHCTTCHHHHTT-CEEEEEEEHH
T ss_pred eEECCCCCEechHHHHHHHHHhcccccccC-----CCCC-----CCCHHHHHHHHHHhcCCCccccccC-ceEEEecCcc
Confidence 466788888888999999988764322111 1111 01456777777777642 22 68762 3678
Q ss_pred chhhhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeeccccc
Q psy8733 125 TGMFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSK 204 (621)
Q Consensus 125 T~~~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~ 204 (621)
|+ +++++... +..+.++||++.+..+++.+. ...++..|...+..+..
T Consensus 106 ~~-----al~~~~~~-----------------------l~~~~~~gd~Vlv~~p~~~~~--~~~~~~~g~~~~~~~~~-- 153 (401)
T 7aat_A 106 TG-----SLRVGANF-----------------------LQRFFKFSRDVYLPKPSWGNH--TPIFRDAGLQLQAYRYY-- 153 (401)
T ss_dssp HH-----HHHHHHHH-----------------------HHHHCTTCCEEEEEESCCTTH--HHHHHHTTCEEEEEECE--
T ss_pred hH-----HHHHHHHH-----------------------HHHhccCCCEEEEcCCCchhH--HHHHHHcCCeeEeeeee--
Confidence 88 56553221 122335566666655554443 34456667543222210
Q ss_pred ccccCCCCCCCCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCcccc-CCCCCceEEEEeccc
Q psy8733 205 YVSIPDQSTWNRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTW-NRDPEASYLYYCDNE 283 (621)
Q Consensus 205 ~~~~~~~~~~~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l-~i~~~t~~V~~thnE 283 (621)
. ...|+ ++.+.+ .+.+ ++.+++++|.+++..
T Consensus 154 -------~-------------------~~~~~--~d~~~l--------------------~~~l~~~~~~~~~v~i~~p~ 185 (401)
T 7aat_A 154 -------D-------------------PKTCS--LDFTGA--------------------MEDISKIPEKSIILLHACAH 185 (401)
T ss_dssp -------E-------------------TTTTE--ECHHHH--------------------HHHHTTSCTTCEEEEESSSC
T ss_pred -------c-------------------cccCc--cCHHHH--------------------HHHHHhCCCCcEEEEeCCCC
Confidence 0 00011 111110 0011 235678999999999
Q ss_pred ccccccccc--------ccccCCCcEEEecc-cccCCCccc-----c----cccc--eEEeccccccCCCc--cEEEEE-
Q psy8733 284 TVDGVEFNY--------IPDSQGIPLVSDMS-SNFLSRKFD-----V----SKFG--VIIAGAQKNIGPAG--ITVVIV- 340 (621)
Q Consensus 284 T~tGv~~p~--------i~~~~g~llvvDav-Ss~G~~pID-----v----~~~g--vl~asaqK~lGP~G--lg~liv- 340 (621)
|.||...+. +++++|+++|+|-+ +.++..+.+ + +..+ +++.|.+|.+|++| +|++++
T Consensus 186 NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~RiG~l~~~ 265 (401)
T 7aat_A 186 NPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNMGLYGERAGAFTVI 265 (401)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTSCCGGGCEEEEEEE
T ss_pred CCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCcEEEEecCCcccccccCceEEEEEE
Confidence 999988773 34678999999987 444433221 1 1222 78899999999999 798887
Q ss_pred --chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHH--H----HhhCCHHHHHHHHHHHHHHHHHHHHc
Q psy8733 341 --REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAW--I----KRQGGLAKMEQNSLQKSVLLYQEIDN 412 (621)
Q Consensus 341 --r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~--i----~~~gGl~~i~~r~~~la~~L~e~L~~ 412 (621)
+++..+.+.. . ... . .......++.....++..+++- + .+ -++.+.++.+++.+++++.|.+
T Consensus 266 ~~~~~~~~~~~~---~---~~~-~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~ 335 (401)
T 7aat_A 266 CRDAEEAKRVES---Q---LKI-L-IRPMYSNPPMNGARIASLILNTPELRKEWLV--EVKGMADRIISMRTQLVSNLKK 335 (401)
T ss_dssp CSSHHHHHHHHH---H---HHH-H-HHHHHSSCCHHHHHHHHHHHHCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHH---H---HHH-H-HHhccCCCChHHHHHHHHHhCCHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHh
Confidence 4443222110 0 000 0 0111223333333333333310 0 12 2677788888899999999987
Q ss_pred cC
Q psy8733 413 SD 414 (621)
Q Consensus 413 ~~ 414 (621)
++
T Consensus 336 ~~ 337 (401)
T 7aat_A 336 EG 337 (401)
T ss_dssp TT
T ss_pred cC
Confidence 63
No 190
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=98.94 E-value=2.9e-08 Score=106.18 Aligned_cols=126 Identities=12% Similarity=0.084 Sum_probs=81.9
Q ss_pred CCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCC--Cccccccc----ceEEeccccccCC-Cc
Q psy8733 272 PEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLS--RKFDVSKF----GVIIAGAQKNIGP-AG 334 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~--~pIDv~~~----gvl~asaqK~lGP-~G 334 (621)
+++++|.+..+.+.+|+..+ + +++++|+++|+|-+++ +|- ....++.+ +++.+| |.+|+ -.
T Consensus 202 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~~~~~~~~~~di~s~s--K~~~~G~~ 279 (433)
T 1zod_A 202 GNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMFACQRDGVTPDILTLS--KTLGAGLP 279 (433)
T ss_dssp SCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEEC--HHHHTTSS
T ss_pred CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHhHHhhcCCCCCEEEec--ccccCCCC
Confidence 45777777666566897655 2 3567899999999998 652 22222222 255444 99974 34
Q ss_pred cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 335 ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 335 lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
+|+++.++++.+.+.+. . .....+++ .|..+..+..++++.+.+. + +.++.+++.+++++.|+++
T Consensus 280 ig~~~~~~~~~~~~~~~--~-------~~~~~t~~-~~~~~~~a~~aal~~~~~~-~---~~~~~~~~~~~l~~~l~~l 344 (433)
T 1zod_A 280 LAAIVTSAAIEERAHEL--G-------YLFYTTHV-SDPLPAAVGLRVLDVVQRD-G---LVARANVMGDRLRRGLLDL 344 (433)
T ss_dssp CEEEEECHHHHHHHHHT--T-------CCCCCTTT-TCHHHHHHHHHHHHHHHHT-T---HHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEhHHHHHhhccC--C-------CCCCCCCC-cCHHHHHHHHHHHHHHHhC-C---HHHHHHHHHHHHHHHHHHH
Confidence 89999999988765321 0 00113333 4556667778899988775 4 4566777788888888764
No 191
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=98.93 E-value=1.2e-08 Score=109.98 Aligned_cols=133 Identities=10% Similarity=0.109 Sum_probs=77.3
Q ss_pred CCceEEEEecccccc-cccccc--------ccccCCCcEEEeccccc-----------CCCcccc--------cccceEE
Q psy8733 272 PEASYLYYCDNETVD-GVEFNY--------IPDSQGIPLVSDMSSNF-----------LSRKFDV--------SKFGVII 323 (621)
Q Consensus 272 ~~t~~V~~thnET~t-Gv~~p~--------i~~~~g~llvvDavSs~-----------G~~pIDv--------~~~gvl~ 323 (621)
+++++|.+++..+.+ |...+. +++++|+++|+|++|++ +...+++ +..|+++
T Consensus 182 ~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~ 261 (467)
T 2oqx_A 182 NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLA 261 (467)
T ss_dssp GGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEE
T ss_pred CceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCCeEE
Confidence 368899998777776 776552 45689999999988866 2222322 2345778
Q ss_pred eccccccCCC-ccEEEEEchh-HHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Q psy8733 324 AGAQKNIGPA-GITVVIVRED-LLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQ 401 (621)
Q Consensus 324 asaqK~lGP~-Glg~livr~~-ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~ 401 (621)
+|.||++|++ | |+++.+++ +++.+....+ +.++. .....+++.+..++.++..+++...+ +...++..+
T Consensus 262 ~s~sK~~g~~~G-g~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~al~~~l~~~~~----~~~~~~~~~ 332 (467)
T 2oqx_A 262 MSAKKDAMVPMG-GLLCMKDDSFFDVYTECRT-LCVVQ---EGFPTYGGLEGGAMERLAVGLYDGMN----LDWLAYRIA 332 (467)
T ss_dssp EESSSTTCCSSC-EEEEECSGGGHHHHHHHHH-HHHHT---TSSCCCCCCCHHHHHHHHHHHHHTTC----HHHHHHHHH
T ss_pred EecccccCCCCc-eEEEecChhHHHHHHHHHH-hhhcc---CCcccccchhhhHHHHHHHhhHhhhh----HHHHHHHHH
Confidence 9999999844 6 77777766 3332211001 10000 01123455555555555544332111 123344567
Q ss_pred HHHHHHHHHHcc
Q psy8733 402 KSVLLYQEIDNS 413 (621)
Q Consensus 402 la~~L~e~L~~~ 413 (621)
+++++++.|.++
T Consensus 333 ~~~~l~~~L~~~ 344 (467)
T 2oqx_A 333 QVQYLVDGLEEI 344 (467)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHC
Confidence 788888988876
No 192
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=98.92 E-value=1.2e-08 Score=110.95 Aligned_cols=132 Identities=12% Similarity=0.053 Sum_probs=86.8
Q ss_pred CCceEEEEec----ccccccccccc-----cccc--CCCcEEEecccccCCCccccccc--ceEEeccccccCC---Ccc
Q psy8733 272 PEASYLYYCD----NETVDGVEFNY-----IPDS--QGIPLVSDMSSNFLSRKFDVSKF--GVIIAGAQKNIGP---AGI 335 (621)
Q Consensus 272 ~~t~~V~~th----nET~tGv~~p~-----i~~~--~g~llvvDavSs~G~~pIDv~~~--gvl~asaqK~lGP---~Gl 335 (621)
+++++|++++ ..+.+|.+.|+ ++++ +|+++++|.+.+.+....+.-.+ |+++.|.||++|+ +..
T Consensus 175 ~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~~gaDiv~~S~sK~lgg~g~~~g 254 (427)
T 3i16_A 175 ESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTDVGADLIAGSLIKNIGGGIAPTG 254 (427)
T ss_dssp TTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGGGTCSEEEEETTSGGGTTTCCSC
T ss_pred CCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCccccCCeEEEecCcccCCCCCCceE
Confidence 6899999998 77888998885 4567 89999999999877633332233 5999999999986 445
Q ss_pred EEEEEchhHHhhhCC--CCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 336 TVVIVREDLLEYALP--ITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 336 g~livr~~ll~~~~~--~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
|+++.++++++++.. ..+.+ +.. -.|.....+. +++-+.. +..+.++..+.+.++.+.|+++
T Consensus 255 G~i~~~~~li~~l~~~~~~~~~---------g~~-~~~~~~~a~~---~l~gl~~---~~~r~~~~~~~a~~la~~L~~~ 318 (427)
T 3i16_A 255 GYLAGTKDCIEKTSYRLTVPGI---------GGE-CGSTFGVVRS---MYQGLFL---APHISMEALKGAILCSRIMELA 318 (427)
T ss_dssp EEEEECHHHHHHHHHHHSCTTT---------GGG-CCCCTTCHHH---HHHHHHH---HHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEECHHHHHHHHHhcccCcc---------Ccc-CCccHHHHHH---HHHHHHH---HHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999887643 11110 000 0110111122 2222222 3456677778888999999988
Q ss_pred CCcccCc
Q psy8733 414 DKFYECP 420 (621)
Q Consensus 414 ~g~~~~~ 420 (621)
+ +.+.|
T Consensus 319 g-~~V~p 324 (427)
T 3i16_A 319 G-FEVMP 324 (427)
T ss_dssp T-CEEES
T ss_pred C-CeecC
Confidence 6 54443
No 193
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=98.92 E-value=7.1e-08 Score=103.04 Aligned_cols=78 Identities=10% Similarity=0.132 Sum_probs=57.7
Q ss_pred CCCceEEEEe-cccccccccccc--------cc-ccCCCcEEEeccccc---CC---Cccccc-------ccc--eEEec
Q psy8733 271 DPEASYLYYC-DNETVDGVEFNY--------IP-DSQGIPLVSDMSSNF---LS---RKFDVS-------KFG--VIIAG 325 (621)
Q Consensus 271 ~~~t~~V~~t-hnET~tGv~~p~--------i~-~~~g~llvvDavSs~---G~---~pIDv~-------~~g--vl~as 325 (621)
.+++++|+++ +..|.||...+. ++ +++|+++|+|.+++. +. .++++. ..+ +++.|
T Consensus 178 ~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 257 (427)
T 3ppl_A 178 NPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTS 257 (427)
T ss_dssp STTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEE
T ss_pred cCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEec
Confidence 3678988866 667888999874 56 789999999999985 22 123332 233 77889
Q ss_pred cccccC-CCccEEEEEchhHHhhh
Q psy8733 326 AQKNIG-PAGITVVIVREDLLEYA 348 (621)
Q Consensus 326 aqK~lG-P~Glg~livr~~ll~~~ 348 (621)
.+|+++ .-++|+++.++++++.+
T Consensus 258 ~SK~~~~G~r~G~~~~~~~l~~~~ 281 (427)
T 3ppl_A 258 TSKITLAGAGVSFFLTSAENRKWY 281 (427)
T ss_dssp STTTSCTTSSCEEEECCHHHHHHH
T ss_pred hhhccCcCccEEEEEcCHHHHHHH
Confidence 999965 45789999999887765
No 194
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=98.89 E-value=8.3e-08 Score=105.88 Aligned_cols=130 Identities=13% Similarity=0.050 Sum_probs=89.7
Q ss_pred CceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC-----cccccc------------cc-eEEecc
Q psy8733 273 EASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR-----KFDVSK------------FG-VIIAGA 326 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~-----pIDv~~------------~g-vl~asa 326 (621)
++++|++++-.|.||...+. +++++++++|+|-+.+.+.. ...+.. .. +++.|.
T Consensus 235 ~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~ 314 (498)
T 3ihj_A 235 DPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHST 314 (498)
T ss_dssp EEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEES
T ss_pred CCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhcccccCceeEEEEecc
Confidence 58999999999999999873 34578999999998875332 222222 12 567788
Q ss_pred cccc-CCCc--cEEEEE---chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHH-----------HHHhh
Q psy8733 327 QKNI-GPAG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFA-----------WIKRQ 389 (621)
Q Consensus 327 qK~l-GP~G--lg~liv---r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~-----------~i~~~ 389 (621)
.|.+ |.+| +|++++ ++++.+.+.. . .+...++++....++..+++ |+.+
T Consensus 315 SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~-------~------~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~- 380 (498)
T 3ihj_A 315 SKGYMGECGYRGGYMEVINLHPEIKGQLVK-------L------LSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSRE- 380 (498)
T ss_dssp SSSTTCCSSSCCEEEEEESCCHHHHHHHHH-------H------HHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHH-
T ss_pred ccccccCcccceEEEEEecCCHHHHHHHHH-------H------HhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHH-
Confidence 9999 8777 566663 6777665421 0 11234566677777777663 4433
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHccCCccc
Q psy8733 390 GGLAKMEQNSLQKSVLLYQEIDNSDKFYE 418 (621)
Q Consensus 390 gGl~~i~~r~~~la~~L~e~L~~~~g~~~ 418 (621)
++.+.++.+++++++++.|.+++|+..
T Consensus 381 --~~~~~~~l~~~~~~l~~~L~~~~g~~~ 407 (498)
T 3ihj_A 381 --KESVLGNLAKKAKLTEDLFNQVPGIHC 407 (498)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHTSTTEEC
T ss_pred --HHHHHHHHHHHHHHHHHHHhcCCCcEe
Confidence 467778888999999999998876644
No 195
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=98.88 E-value=7e-09 Score=112.80 Aligned_cols=133 Identities=8% Similarity=0.093 Sum_probs=85.2
Q ss_pred CCCCceEEEEec----ccccccccccc-----cccc--CCCcEEEecccccCCCccccccc--ceEEeccccccC----C
Q psy8733 270 RDPEASYLYYCD----NETVDGVEFNY-----IPDS--QGIPLVSDMSSNFLSRKFDVSKF--GVIIAGAQKNIG----P 332 (621)
Q Consensus 270 i~~~t~~V~~th----nET~tGv~~p~-----i~~~--~g~llvvDavSs~G~~pIDv~~~--gvl~asaqK~lG----P 332 (621)
+++++++|++++ ..+.+|...++ ++++ +|+++++|.+++.+....+...+ |+++.|.+|++| |
T Consensus 162 l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~~g~Di~~~S~sK~lgg~~~~ 241 (431)
T 3ht4_A 162 IHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGADLMAGSLIKNPGGGIVK 241 (431)
T ss_dssp CCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGGTTCSEEEEETTSGGGTTTCS
T ss_pred cCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCccccCCeEEEcCccccCCCCCCC
Confidence 567899999986 33444555554 4567 89999999999988754444444 499999999963 7
Q ss_pred CccEEEEEchhHHhhhCC--CCCceeeccccccCCCccC-CchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Q psy8733 333 AGITVVIVREDLLEYALP--ITPTVFHFKINADNNSVYN-TPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQE 409 (621)
Q Consensus 333 ~Glg~livr~~ll~~~~~--~~P~~ld~~~~~~~~s~~~-TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~ 409 (621)
+| |+++.++++++++.. ..+.+ +...+ |+.. .+.+...++. ++.+.++..+.+.++.+.
T Consensus 242 ~G-G~v~~~~~li~~l~~~~~~~~~---------g~~~~~~~~~--~~~~~~~l~~------~~~~~~~~~~~a~~l~~~ 303 (431)
T 3ht4_A 242 TG-GYIVGKEQYVEACAYRLTSPGI---------GAEAGASLYS--LQEMYQGFFL------APHVAGQALKGAIFTAAF 303 (431)
T ss_dssp SC-EEEEECHHHHHHHHHHHSCTTT---------TTSCSCCCSC--SHHHHHHHHH------HHHHHHHHHHHHHHHHHH
T ss_pred ce-EEEEecHHHHHHHHHHhccCCc---------ccccCccHHH--HHHHHhHhhh------HHHHHHHHHHHHHHHHHH
Confidence 88 999999999887643 11110 01111 1211 1122233333 345567778888899999
Q ss_pred HHccCCcccCcc
Q psy8733 410 IDNSDKFYECPV 421 (621)
Q Consensus 410 L~~~~g~~~~~~ 421 (621)
|++++ +.+.|.
T Consensus 304 L~~~g-~~v~p~ 314 (431)
T 3ht4_A 304 LEKLG-MNTSPA 314 (431)
T ss_dssp HHHHT-CCEESC
T ss_pred HHhCc-CEecCC
Confidence 99886 554443
No 196
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=98.88 E-value=9.9e-08 Score=106.22 Aligned_cols=142 Identities=11% Similarity=0.051 Sum_probs=87.7
Q ss_pred CCCCceEEEEecccccccccccc--------ccc-cCCCcEEEecccccCCC-cccccc--cc--eEEeccccccCCCc-
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPD-SQGIPLVSDMSSNFLSR-KFDVSK--FG--VIIAGAQKNIGPAG- 334 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~-~~g~llvvDavSs~G~~-pIDv~~--~g--vl~asaqK~lGP~G- 334 (621)
+++++++|++++..+.+|+..+. +++ .+++++|+|.+.+-... +..+.. .+ +++.|..|.+|++|
T Consensus 241 l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~ 320 (533)
T 3f6t_A 241 KDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFKSIYSVVPYNTMLVYSYSKLFGCTGW 320 (533)
T ss_dssp SCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCCCHHHHSGGGEEEEEESHHHHTCGGG
T ss_pred hCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCccCHhhcCCCCEEEEecCcccCCCccc
Confidence 56789999999999999999874 234 67999999999763221 222211 12 88899999999999
Q ss_pred -cEEEEEchh-----HHhhhCC--------------CCCceeeccc------cccCCCccCCchHHHHHHHHH-HHHHHH
Q psy8733 335 -ITVVIVRED-----LLEYALP--------------ITPTVFHFKI------NADNNSVYNTPPTFVVHVIQR-VFAWIK 387 (621)
Q Consensus 335 -lg~livr~~-----ll~~~~~--------------~~P~~ld~~~------~~~~~s~~~TP~v~~I~aL~~-aL~~i~ 387 (621)
+|+++.+++ +++.+.+ ..|.-+.+.. .........+++.....++.. ++..+.
T Consensus 321 RiG~l~~~~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~ 400 (533)
T 3f6t_A 321 RLGVIALNEKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLL 400 (533)
T ss_dssp CEEEEEEESSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHT
T ss_pred ceEEEEECcHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHh
Confidence 899999887 5443311 1111000000 001122233555555555332 444453
Q ss_pred -----hh--CCHHHHHHHHHHHHHHHHHHHH
Q psy8733 388 -----RQ--GGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 388 -----~~--gGl~~i~~r~~~la~~L~e~L~ 411 (621)
+. .-++.+.++.+++.+.+++.|.
T Consensus 401 ~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~ 431 (533)
T 3f6t_A 401 TSTNGGSDDPYIDIARKLVSERYDQLHDAMQ 431 (533)
T ss_dssp TCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhccccchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 11 0267778888888888988886
No 197
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=98.87 E-value=1.5e-08 Score=110.18 Aligned_cols=130 Identities=12% Similarity=0.055 Sum_probs=85.7
Q ss_pred CCceEEEEec----ccccccccccc-----cccc--CCCcEEEecccccCC---CcccccccceEEeccccccCC---Cc
Q psy8733 272 PEASYLYYCD----NETVDGVEFNY-----IPDS--QGIPLVSDMSSNFLS---RKFDVSKFGVIIAGAQKNIGP---AG 334 (621)
Q Consensus 272 ~~t~~V~~th----nET~tGv~~p~-----i~~~--~g~llvvDavSs~G~---~pIDv~~~gvl~asaqK~lGP---~G 334 (621)
+++++|++++ ..+.+|...|+ ++++ +|+++++|.+.+.+. .|++. ..|+++.|.||++|+ +.
T Consensus 175 ~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~~~-gaDiv~~S~sK~lgg~g~~~ 253 (427)
T 3hvy_A 175 DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEPTDV-GADIIAGSLIKNIGGGIATT 253 (427)
T ss_dssp TTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGGGG-TCSEEEEETTSGGGTTTCCS
T ss_pred CCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCCCCccc-CCeEEEECCcccccccccce
Confidence 6899999999 77888988885 4566 899999999988776 33332 135999999999975 33
Q ss_pred cEEEEEchhHHhhhCC--CCCceeeccccccCCCccC-CchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 335 ITVVIVREDLLEYALP--ITPTVFHFKINADNNSVYN-TPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 335 lg~livr~~ll~~~~~--~~P~~ld~~~~~~~~s~~~-TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
.|+++.++++++++.. ..+.+ +...+ ++. ..+.+...++. ++.+.++..+.+.++.+.|+
T Consensus 254 GG~i~~~~~li~~l~~~~~~~~~---------g~~~~~~~~--~a~~~~~gl~~------~~~r~~~~~~~a~~la~~L~ 316 (427)
T 3hvy_A 254 GGYIAGKEEYVTQATFRVTVPGI---------GGECGSTFG--VMRSLYEGLFM------APHVTIEAVKGAVFCARIME 316 (427)
T ss_dssp CEEEEECHHHHHHHHHHHSCTTT---------GGGCCCCTT--CHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECHHHHHHHHHHhhcCCc---------ccccCCCHH--HHHHHHHhHhH------HHHHHHHHHHHHHHHHHHHH
Confidence 4999999999887643 11110 00111 121 11222222222 34566777888889999999
Q ss_pred ccCCcccCc
Q psy8733 412 NSDKFYECP 420 (621)
Q Consensus 412 ~~~g~~~~~ 420 (621)
+.+ +.+.|
T Consensus 317 ~~g-~~V~p 324 (427)
T 3hvy_A 317 LAG-FDVLP 324 (427)
T ss_dssp HTT-CEEES
T ss_pred hCC-CeecC
Confidence 886 54443
No 198
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=98.86 E-value=3e-08 Score=107.81 Aligned_cols=139 Identities=13% Similarity=0.062 Sum_probs=84.4
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCCcccccccc--eEEeccccccCCCc--cEEEEE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKFDVSKFG--VIIAGAQKNIGPAG--ITVVIV 340 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pIDv~~~g--vl~asaqK~lGP~G--lg~liv 340 (621)
+++++++|++++..|.+|...|+ +++++|+++|+|.+++.+.. .+..++| +++.|.+|++|++| +|.+++
T Consensus 164 i~~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~~~~~-~~~~~~g~div~~S~sK~l~g~g~~~gG~vv 242 (430)
T 3ri6_A 164 CDETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMTPPYL-LEAKRLGVDIEVLSSTKFISGGGTSVGGVLI 242 (430)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTSCTTT-CCGGGGTCSEEEEECCCEEETTEEECCEEEE
T ss_pred hCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccccc-CChHHcCCEEEEECCcccccCCCCceEEEEE
Confidence 56789999999999999999986 45689999999999988765 4444554 99999999998664 666666
Q ss_pred --chhHHhhhCCCCCc---------eeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Q psy8733 341 --REDLLEYALPITPT---------VFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQE 409 (621)
Q Consensus 341 --r~~ll~~~~~~~P~---------~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~ 409 (621)
.+..|... ...+. +............-.+++....+.+...++.+ ..+.+++.+.+..+.+.
T Consensus 243 ~~~~~~~~~~-~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~~l------~~r~~~~~~na~~la~~ 315 (430)
T 3ri6_A 243 DHGLFEWKSL-PSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGLETM------ALRIERSCQNAQELAHW 315 (430)
T ss_dssp ECSCSCGGGS-TTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHH
T ss_pred ECChHHhhhc-cchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhhH------HHHHHHHHHHHHHHHHH
Confidence 33223110 00000 00000000000111233334444333444444 34455667788888898
Q ss_pred HHccCCc
Q psy8733 410 IDNSDKF 416 (621)
Q Consensus 410 L~~~~g~ 416 (621)
|++.+++
T Consensus 316 L~~~p~v 322 (430)
T 3ri6_A 316 LLSIPQV 322 (430)
T ss_dssp HTTCTTC
T ss_pred HhCCCCc
Confidence 8887644
No 199
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=98.85 E-value=3.6e-09 Score=109.73 Aligned_cols=131 Identities=15% Similarity=0.089 Sum_probs=81.0
Q ss_pred CCCceEEEEecccccc-cccccc--------ccccCCCcEEEecccccCC------Cccccc-ccceEEeccccccC-CC
Q psy8733 271 DPEASYLYYCDNETVD-GVEFNY--------IPDSQGIPLVSDMSSNFLS------RKFDVS-KFGVIIAGAQKNIG-PA 333 (621)
Q Consensus 271 ~~~t~~V~~thnET~t-Gv~~p~--------i~~~~g~llvvDavSs~G~------~pIDv~-~~gvl~asaqK~lG-P~ 333 (621)
.+++++|++++..+.+ |...|. +++++|+++|+|.++..+. .+.++. ..|+++.|.+|++| |.
T Consensus 135 ~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~ 214 (359)
T 3pj0_A 135 REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIA 214 (359)
T ss_dssp SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSS
T ss_pred cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcc
Confidence 5678999998776665 787773 3457899999998876543 222222 23577889999996 76
Q ss_pred ccEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 334 GITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 334 Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
| |+++.++++++++... .. ..+....+.+.....++ .+++.. ++. .++..++++++++.|+++
T Consensus 215 g-g~~~~~~~l~~~~~~~-------~~--~~~~~~~~~~~~~~a~~-~~l~~~-----~~~-~~~~~~~~~~l~~~L~~~ 277 (359)
T 3pj0_A 215 G-AILAGNDDFVQEAKIW-------KR--RYGGDLISLYPYILSAD-YYFEKR-----IGK-MAEYFEAAKGLAERFNSC 277 (359)
T ss_dssp C-EEEEECHHHHHHHHHH-------HH--HTTCCCSCCHHHHHHHH-HHHHHH-----GGG-HHHHHHHHHHHHHHHHTS
T ss_pred e-EEEECCHHHHHHHHHH-------HH--HhCCCcchhHHHHHHHH-HHHHHH-----HHH-hHHHHHHHHHHHHHHhhC
Confidence 6 8999999988765320 00 00111222333333222 233322 222 334567778899999998
Q ss_pred CCccc
Q psy8733 414 DKFYE 418 (621)
Q Consensus 414 ~g~~~ 418 (621)
+|+..
T Consensus 278 ~g~~~ 282 (359)
T 3pj0_A 278 SGVKT 282 (359)
T ss_dssp TTEEE
T ss_pred CCcee
Confidence 76654
No 200
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=98.84 E-value=2.4e-08 Score=109.49 Aligned_cols=78 Identities=14% Similarity=0.169 Sum_probs=63.9
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCCCcEEEecccccCCC--cccccccceEEeccccccC-CCcc--EEEE
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSR--KFDVSKFGVIIAGAQKNIG-PAGI--TVVI 339 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~--pIDv~~~gvl~asaqK~lG-P~Gl--g~li 339 (621)
+++++++|.+++..|.+|...|+ +++++|+++|+|.+++.|.. |+++ ..++++.|.+|++| |.|+ |+++
T Consensus 214 i~~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~~g~~~~~~~~-~~div~~S~sK~~~g~~Gl~~G~l~ 292 (464)
T 1ibj_A 214 IGPQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIMSPVLSRPLEL-GADIVMHSATKFIAGHSDVMAGVLA 292 (464)
T ss_dssp CCSSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTTCTTTCCGGGT-TCSEEEEETTTTTTCSSCCCCEEEE
T ss_pred hccCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCcccccCChhhc-CCEEEEECCcccccCCCCCcEEEEE
Confidence 45789999999999999999986 45689999999999988765 5553 23599999999995 8897 9999
Q ss_pred Ech-hHHhhh
Q psy8733 340 VRE-DLLEYA 348 (621)
Q Consensus 340 vr~-~ll~~~ 348 (621)
+++ ++.+++
T Consensus 293 ~~~~~l~~~l 302 (464)
T 1ibj_A 293 VKGEKLAKEV 302 (464)
T ss_dssp ECSHHHHHHH
T ss_pred EChHHHHHHH
Confidence 995 666654
No 201
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=98.80 E-value=2.6e-07 Score=98.82 Aligned_cols=119 Identities=18% Similarity=0.280 Sum_probs=78.1
Q ss_pred CceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCCC--ccccccc----ceEEeccccccC-C-Cc
Q psy8733 273 EASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLSR--KFDVSKF----GVIIAGAQKNIG-P-AG 334 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~~--pIDv~~~----gvl~asaqK~lG-P-~G 334 (621)
++++|.+..+.+.+|+..+ + +++++|+++|+|-+++ +|.. ...++.+ +++.+| |.+| + -+
T Consensus 212 ~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~t~s--K~~~~G~~r 289 (419)
T 2eo5_A 212 EVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLFAIENFNTVPDVITLA--KALGGGIMP 289 (419)
T ss_dssp GEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTTSC
T ss_pred CEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchhhHHhcCCCCCEEEec--ccccCCccc
Confidence 5677777776666897655 2 3467899999999998 6532 1122222 266555 9996 3 66
Q ss_pred cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 335 ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 335 lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
+|.++.++++. .+ . . ....+ .+.|..++.++.++|+.+.+ +.++.+++.+++++.|.++
T Consensus 290 iG~~~~~~~~~-~~-~---~--------~~~~t-~~~n~~~~~aa~aal~~~~~------~~~~~~~~~~~l~~~L~~~ 348 (419)
T 2eo5_A 290 IGATIFRKDLD-FK-P---G--------MHSNT-FGGNALACAIGSKVIDIVKD------LLPHVNEIGKIFAEELQGL 348 (419)
T ss_dssp CEEEEEEGGGC-CC------------------C-CCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHTTS
T ss_pred eEEEEEchHhh-cC-C---c--------ccCCC-CCCCHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHh
Confidence 89999998864 32 1 0 01122 34466778888888887643 6677788888898888764
No 202
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=98.78 E-value=1.2e-07 Score=102.87 Aligned_cols=127 Identities=13% Similarity=0.097 Sum_probs=84.7
Q ss_pred CCCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCCC--ccccccc----ceEEeccccccCCCc
Q psy8733 271 DPEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLSR--KFDVSKF----GVIIAGAQKNIGPAG 334 (621)
Q Consensus 271 ~~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~~--pIDv~~~----gvl~asaqK~lGP~G 334 (621)
.+++++|.+.++.+.+|+..+ + +++++|+++|+|.+|+ +|-. ...++.+ +++.+| |++ |
T Consensus 229 ~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~t~s--K~l-~-- 303 (449)
T 2cjg_A 229 PHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFG--KKT-Q-- 303 (449)
T ss_dssp TTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEEC--GGG-S--
T ss_pred CCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcceeecccCCCceEEEec--Ccc-c--
Confidence 357888888887777897655 2 4568999999999999 5422 1122222 366555 999 4
Q ss_pred cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 335 ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 335 lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
+|.++.++++.+.+.+. ++. . ....+++ ++|..+.++..++|+.+.+. .+.++.+++.+++++.|+++
T Consensus 304 iG~~~~~~~~~~~l~~~---~~~--~-~~~~~t~-~~n~~~~~aa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~l 371 (449)
T 2cjg_A 304 VCGVMAGRRVDEVADNV---FAV--P-SRLNSTW-GGNLTDMVRARRILEVIEAE----GLFERAVQHGKYLRARLDEL 371 (449)
T ss_dssp SEEEEECGGGGGSTTCT---TTS--T-TSSCCSS-SSCHHHHHHHHHHHHHHHHH----THHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECHHHhhhhhhc---ccC--C-cccccCC-CCCHHHHHHHHHHHHHHHhc----cHHHHHHHHHHHHHHHHHHH
Confidence 88999999887754321 100 0 0112233 45666778888999988764 35577788888888888764
No 203
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=98.75 E-value=5.8e-07 Score=96.04 Aligned_cols=125 Identities=12% Similarity=0.124 Sum_probs=78.0
Q ss_pred CceEEE-Eecccccccccccc--------ccc-cCCCcEEEecccc---cCCC-----cc-cc----cccc--eEEeccc
Q psy8733 273 EASYLY-YCDNETVDGVEFNY--------IPD-SQGIPLVSDMSSN---FLSR-----KF-DV----SKFG--VIIAGAQ 327 (621)
Q Consensus 273 ~t~~V~-~thnET~tGv~~p~--------i~~-~~g~llvvDavSs---~G~~-----pI-Dv----~~~g--vl~asaq 327 (621)
++++|+ +++..|.||...+. +++ ++|+++|+|.+++ +... ++ ++ +..+ +++.|..
T Consensus 178 ~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 257 (422)
T 3d6k_A 178 QVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTS 257 (422)
T ss_dssp TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEEST
T ss_pred CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChh
Confidence 688888 67778899999873 456 7899999999997 3211 22 21 2334 7788889
Q ss_pred cccCCCc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHH---HHhhCCHHHHHHHHHHH
Q psy8733 328 KNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAW---IKRQGGLAKMEQNSLQK 402 (621)
Q Consensus 328 K~lGP~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~---i~~~gGl~~i~~r~~~l 402 (621)
|+++| | +|+++.++++++++... . .....++|.....++.++|+. +.+. ++.+.++.+++
T Consensus 258 K~~~~-GlriG~~~~~~~l~~~l~~~-------~-----~~~~~~~~~~~q~a~~~~l~~~~~~~~~--~~~~~~~~~~~ 322 (422)
T 3d6k_A 258 KITHA-GSGVSFFASSKENIEWYASH-------A-----NVRGIGPNKLNQLAHAQFFGDVAGLKAH--MLKHAASLAPK 322 (422)
T ss_dssp TTSCT-TSSCEEEECCHHHHHHHHHH-------H-----HHHCSCCCHHHHHHHHHHHCSHHHHHHH--HHHHHHHHHHH
T ss_pred hhcCc-ccceEEEEeCHHHHHHHHHH-------H-----HhhcCCCCHHHHHHHHHHHhCcchHHHH--HHHHHHHHHHH
Confidence 99444 6 89999999988765320 0 011134455555555555532 1111 44555555556
Q ss_pred HHHHHHHHHc
Q psy8733 403 SVLLYQEIDN 412 (621)
Q Consensus 403 a~~L~e~L~~ 412 (621)
.+.+++.|.+
T Consensus 323 ~~~l~~~L~~ 332 (422)
T 3d6k_A 323 FERVLEILDS 332 (422)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6666666654
No 204
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=98.75 E-value=6.2e-08 Score=100.39 Aligned_cols=129 Identities=15% Similarity=0.116 Sum_probs=80.8
Q ss_pred CceEEEEecccccc-cccccc--------ccccCCCcEEEecccc------cCCCcccc-cccceEEecccccc-CCCcc
Q psy8733 273 EASYLYYCDNETVD-GVEFNY--------IPDSQGIPLVSDMSSN------FLSRKFDV-SKFGVIIAGAQKNI-GPAGI 335 (621)
Q Consensus 273 ~t~~V~~thnET~t-Gv~~p~--------i~~~~g~llvvDavSs------~G~~pIDv-~~~gvl~asaqK~l-GP~Gl 335 (621)
++++|.+++..+.+ |...+. +++++|+++|+|.+.. .+....++ ...+.++.|.+|++ ||.|
T Consensus 135 ~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g- 213 (357)
T 3lws_A 135 DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAG- 213 (357)
T ss_dssp SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSC-
T ss_pred CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCce-
Confidence 48899999888777 887762 3468999999998754 22222222 23467789999999 6999
Q ss_pred EEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCC
Q psy8733 336 TVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDK 415 (621)
Q Consensus 336 g~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g 415 (621)
|+++.++++++++... .. ..+....+++.....++ .+++... +.+ ++..++++++++.|++++|
T Consensus 214 g~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~-~~l~~~~-----~~~-~~~~~~~~~l~~~L~~~~g 277 (357)
T 3lws_A 214 AILAGPAAFCQTARIW-------KR--RYGGDLISLYPYIVSAD-YYYELRK-----DRM-GQYYEQAKQLAEQFNALPG 277 (357)
T ss_dssp EEEEECHHHHHHHHHH-------HH--HTTCCCSCCHHHHHHHH-HHHHHHT-----TCH-HHHHHHHHHHHHHHHTSTT
T ss_pred EEEEcCHHHHHHHHHH-------HH--HhcCCcccchHHHHHHH-HHHHHHH-----HHH-HHHHHHHHHHHHHHHhCCC
Confidence 9999999988765321 00 00111222333333332 3444321 222 2345667889999999877
Q ss_pred ccc
Q psy8733 416 FYE 418 (621)
Q Consensus 416 ~~~ 418 (621)
+..
T Consensus 278 ~~~ 280 (357)
T 3lws_A 278 VHT 280 (357)
T ss_dssp EEE
T ss_pred Cee
Confidence 754
No 205
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=98.74 E-value=3.4e-08 Score=113.86 Aligned_cols=126 Identities=17% Similarity=0.191 Sum_probs=86.7
Q ss_pred eEEEEecccccccccccc--c---cccCCCcEEEecccccCC--Ccc----c-cc---ccceE---EeccccccC-CCcc
Q psy8733 275 SYLYYCDNETVDGVEFNY--I---PDSQGIPLVSDMSSNFLS--RKF----D-VS---KFGVI---IAGAQKNIG-PAGI 335 (621)
Q Consensus 275 ~~V~~thnET~tGv~~p~--i---~~~~g~llvvDavSs~G~--~pI----D-v~---~~gvl---~asaqK~lG-P~Gl 335 (621)
++|.+|+. |.+|...|+ | ++.+ .+++|.+.+.+. .|. . +. ..|++ +.|.||+|| |++.
T Consensus 299 ~~vivt~p-n~~G~v~dl~~I~ela~~~--~livDEAH~~~~~f~~~~~~~~al~~g~~aD~vii~~~S~hKtL~gltqg 375 (715)
T 3n75_A 299 VHAVITNS-TYDGLLYNTDFIKKTLDVK--SIHFDSAWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQA 375 (715)
T ss_dssp SEEEEESS-CTTSEEECHHHHHHHCCCS--EEEEECTTCTTGGGSGGGTTSSTTSSSCCTTCEEEEEECHHHHSSCCTTC
T ss_pred eEEEEECC-CCCCccCCHHHHHHHhCcC--cEEEccccccccccCCccccccccccCcCCCEEEEEEecccccccCCCCe
Confidence 37888888 999999996 3 3333 278999987653 121 1 21 13544 899999996 8899
Q ss_pred EEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHh-hCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 336 TVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKR-QGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 336 g~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~-~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
|++.++++..... ++ ... .-..-.+|+...++++.+|++++.+ . | +.+.++..++++++++.|.+++
T Consensus 376 s~i~v~~~i~~~~-------~~--~~~-~~~~STSpsy~~~AsldaA~~~~~~~~-g-~~~~~~l~~~a~~~r~~L~~i~ 443 (715)
T 3n75_A 376 SMIHVKGDVNEET-------FN--EAY-MMHTTTSPHYGIVASTETAAAMMKGNA-G-KRLINGSIERAIKFRKEIKRLR 443 (715)
T ss_dssp EEEEEESCCCHHH-------HH--HHH-HHTSCSSCCHHHHHHHHHHHHHHSHHH-H-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEeCchhhHHH-------HH--HHH-HhhcCCCchHHHHHHHHHHHHHHHhhc-c-HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999987621100 00 000 0011257899999999999999975 4 4 4578889999999999998875
Q ss_pred C
Q psy8733 415 K 415 (621)
Q Consensus 415 g 415 (621)
+
T Consensus 444 ~ 444 (715)
T 3n75_A 444 T 444 (715)
T ss_dssp H
T ss_pred h
Confidence 3
No 206
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=98.73 E-value=8.8e-07 Score=94.65 Aligned_cols=126 Identities=14% Similarity=0.215 Sum_probs=77.4
Q ss_pred CCceEEEEecccc-ccccccc----c-----ccccCCCcEEEecccc-cCCC--ccccccc-c----eEEeccccccCCC
Q psy8733 272 PEASYLYYCDNET-VDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLSR--KFDVSKF-G----VIIAGAQKNIGPA 333 (621)
Q Consensus 272 ~~t~~V~~thnET-~tGv~~p----~-----i~~~~g~llvvDavSs-~G~~--pIDv~~~-g----vl~asaqK~lGP~ 333 (621)
+++++|.+..+.+ .+|+..+ + +++++|+++|+|-+++ +|.. ..-++.+ + ++++| |.+|.
T Consensus 189 ~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~t~s--K~l~~- 265 (430)
T 3i4j_A 189 ETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIAVLG--KGLAA- 265 (430)
T ss_dssp GGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEEEEC--GGGTT-
T ss_pred CCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEEEEc--ccccC-
Confidence 3466777766666 7788665 2 4568899999999987 5322 2223333 2 56555 99985
Q ss_pred c---cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Q psy8733 334 G---ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEI 410 (621)
Q Consensus 334 G---lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L 410 (621)
| +|.++.++++.+.+.+....+ ....++ +.|..+..+..++|+.+.+. + +.++.+++.+++++.|
T Consensus 266 G~~r~G~~~~~~~i~~~~~~~~~~~-------~~~~t~-~~~~~~~aaa~aal~~~~~~-~---~~~~~~~~~~~~~~~l 333 (430)
T 3i4j_A 266 GYAPLAGLLAAPQVYETVMGGSGAF-------MHGFTY-AGHPVSVAAGLSVLDIVERE-D---LTGAAKERGAQLLAGL 333 (430)
T ss_dssp TSSCCEEEEECHHHHHHHHHTTCBC-------CCCCTT-TTCHHHHHHHHHHHHHHHHT-T---HHHHHHHHHHHHHHHH
T ss_pred CccccEEEEECHHHHHHHhccCCcc-------cccCCC-CCCHHHHHHHHHHHHHHHcc-c---HHHHHHHHHHHHHHHH
Confidence 7 799999999987664311100 112233 45566677777888888664 3 3344444555555555
Q ss_pred Hc
Q psy8733 411 DN 412 (621)
Q Consensus 411 ~~ 412 (621)
.+
T Consensus 334 ~~ 335 (430)
T 3i4j_A 334 QA 335 (430)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 207
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=98.72 E-value=1e-06 Score=93.98 Aligned_cols=125 Identities=14% Similarity=0.081 Sum_probs=83.2
Q ss_pred CCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-c--CCCccccccc----ceEEeccccccCCCc-
Q psy8733 272 PEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-F--LSRKFDVSKF----GVIIAGAQKNIGPAG- 334 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~--G~~pIDv~~~----gvl~asaqK~lGP~G- 334 (621)
+++++|.+..+.+.+|+..+ + +++++|+++|+|-+++ + |. ....+.+ +++.+| |.+| +|
T Consensus 198 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~-~~~~~~~~~~~di~t~s--K~~~-~G~ 273 (427)
T 3fq8_A 198 GEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAY-GGVQEKFGVTPDLTTLG--KIIG-GGL 273 (427)
T ss_dssp TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBT-THHHHHTTCCCSEEEEC--GGGG-TTS
T ss_pred CCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCc-chhhHhcCCCCChhhhh--hhhh-CCc
Confidence 36888888888888899887 3 4568999999999997 1 11 1222222 255555 9998 36
Q ss_pred -cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 335 -ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 335 -lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
+|+++.++++++.+.+..+. ....+ .++|..+..+..++++.+.+. .+.++.+++.+++++.|.++
T Consensus 274 ~~G~~~~~~~~~~~~~~~~~~--------~~~~t-~~~~~~~~aa~~aal~~~~~~----~~~~~~~~~~~~~~~~l~~~ 340 (427)
T 3fq8_A 274 PVGAYGGKREIMQLVAPAGPM--------YQAGT-LSGNPLAMTAGIKTLELLRQP----GTYEYLDQITKRLSDGLLAI 340 (427)
T ss_dssp SCEEEEECHHHHTTBTTTSSB--------CCCCT-TTTCHHHHHHHHHHHHHHTST----THHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcHHHHHhhccCCCc--------cccCC-CCcCHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHH
Confidence 99999999998766431110 01122 244667777777888887553 34566666777777777654
No 208
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=98.72 E-value=1.1e-06 Score=94.73 Aligned_cols=129 Identities=13% Similarity=0.193 Sum_probs=80.0
Q ss_pred CCceEEEEecc-ccccccccc----c-----ccccCCCcEEEecccc-cCC--Ccccccccc----eEEeccccccC-C-
Q psy8733 272 PEASYLYYCDN-ETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLS--RKFDVSKFG----VIIAGAQKNIG-P- 332 (621)
Q Consensus 272 ~~t~~V~~thn-ET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~--~pIDv~~~g----vl~asaqK~lG-P- 332 (621)
+++++|.+..+ .+ +|+..| + +++++|+++|+|-+++ +|- ...-.+.++ ++++| |.+| .
T Consensus 214 ~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~t~s--K~l~~G~ 290 (452)
T 3n5m_A 214 ETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDIITMA--KGITSAY 290 (452)
T ss_dssp GGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEEC--GGGGTTS
T ss_pred CCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEEeec--ccccCCC
Confidence 45778888887 78 998775 2 4568999999999987 542 222333333 55554 9885 2
Q ss_pred CccEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc
Q psy8733 333 AGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN 412 (621)
Q Consensus 333 ~Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~ 412 (621)
..+|.++.++++.+.+.+... ... .....+++ .|..+.++..++|+.+.+. + +.++.+++.+++++.|.+
T Consensus 291 ~~ig~~~~~~~i~~~~~~~~~----~~~-~~~~~t~~-~~~~~~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~~L~~ 360 (452)
T 3n5m_A 291 LPLSATAVKREIYEAFKGKGE----YEF-FRHINTFG-GNPAACALALKNLEIIENE-N---LIERSAQMGSLLLEQLKE 360 (452)
T ss_dssp SCCEEEEEEHHHHGGGCSSST----TCS-CCCCCSST-TCHHHHHHHHHHHHHHHHT-T---HHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEECHHHHHHHhhccC----CCC-ccccCCCC-CCHHHHHHHHHHHHHHHhc-c---HHHHHHHHHHHHHHHHHH
Confidence 568999999999887643100 000 01123343 3445566666888888664 3 344555556666666655
Q ss_pred c
Q psy8733 413 S 413 (621)
Q Consensus 413 ~ 413 (621)
+
T Consensus 361 ~ 361 (452)
T 3n5m_A 361 E 361 (452)
T ss_dssp H
T ss_pred H
Confidence 3
No 209
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=98.71 E-value=1.5e-07 Score=101.10 Aligned_cols=127 Identities=13% Similarity=0.098 Sum_probs=81.8
Q ss_pred CCCCceEEEEecccccccccccc-----ccccCCCcEEEeccccc--CCCcccccccceEEeccccccCCC--ccEE--E
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNF--LSRKFDVSKFGVIIAGAQKNIGPA--GITV--V 338 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~--G~~pIDv~~~gvl~asaqK~lGP~--Glg~--l 338 (621)
+++++++|++++..+.+|...|+ +++++|+++|+|.+++. ...|+++ ..++++.|.+|++|.+ .+|. +
T Consensus 149 i~~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~-g~div~~S~sK~l~g~g~~~gG~~v 227 (400)
T 3nmy_A 149 IRADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFASPMLQRPLSL-GADLVVHSATKYLNGHSDMVGGIAV 227 (400)
T ss_dssp CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTHHHHCCGGGG-TCSEEEEETTTTTTCSSSCCCEEEE
T ss_pred hccCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcccccCChhhc-CCcEEEecCccccCCCCCcceeEEE
Confidence 55789999999999999999986 45789999999999874 3356654 2459999999999633 3433 3
Q ss_pred EE-chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCC
Q psy8733 339 IV-REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDK 415 (621)
Q Consensus 339 iv-r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g 415 (621)
++ ++++.+++.. +.. ..-.+++....+.+...++ .++.+.+++.+.+..+.+.|.+.+.
T Consensus 228 v~~~~~~~~~l~~-------~~~-----~~g~~~~~~~a~~~l~~l~------~l~~r~~~~~~~a~~l~~~L~~~p~ 287 (400)
T 3nmy_A 228 VGDNAELAEQMAF-------LQN-----SIGGVQGPFDSFLALRGLK------TLPLRMRAHCENALALAQWLETHPA 287 (400)
T ss_dssp ECSCHHHHHHHHH-------HHH-----HHCCBCCHHHHHHHHHHHT------THHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred EeCCHHHHHHHHH-------HHH-----hcCCCCCHHHHHHHHHhHh------HHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 33 5556555421 000 0011223333333333333 2555667778888888888887663
No 210
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=98.70 E-value=2.7e-06 Score=91.78 Aligned_cols=130 Identities=16% Similarity=0.130 Sum_probs=78.3
Q ss_pred CCceEEEEeccc-cccccccc----c-----ccccCCCcEEEecccc-cC--CCcccccccc----eEEeccccccCC--
Q psy8733 272 PEASYLYYCDNE-TVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FL--SRKFDVSKFG----VIIAGAQKNIGP-- 332 (621)
Q Consensus 272 ~~t~~V~~thnE-T~tGv~~p----~-----i~~~~g~llvvDavSs-~G--~~pIDv~~~g----vl~asaqK~lGP-- 332 (621)
+++++|.+..+. +.+|...+ + +++++|+++|+|-+++ +| ....-.+.++ ++++| |.+|.
T Consensus 209 ~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~t~s--K~l~~G~ 286 (448)
T 3dod_A 209 EEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLMAAG--KGITGGY 286 (448)
T ss_dssp GGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTS
T ss_pred CCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEEEec--ccccCCc
Confidence 356777777766 67787665 2 4568999999999987 54 2222333333 56555 99964
Q ss_pred CccEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc
Q psy8733 333 AGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN 412 (621)
Q Consensus 333 ~Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~ 412 (621)
..+|.++.++++.+.+...... ........++ +.|.....+..++|+.+.+. + +.++.+++.+++++.|.+
T Consensus 287 ~~ig~v~~~~~~~~~~~~~~~~----~~~~~~~~t~-~~~~~~~aaa~aal~~~~~~-~---~~~~~~~~~~~~~~~l~~ 357 (448)
T 3dod_A 287 LPIAVTFATEDIYKAFYDDYEN----LKTFFHGHSY-TGNQLGCAVALENLALFESE-N---IVEQVAEKSKKLHFLLQD 357 (448)
T ss_dssp SCCEEEEEEHHHHHTTCSCGGG----CCCCCCCCTT-TTCHHHHHHHHHHHHHHHHT-T---HHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEECHHHHHHhhhcccc----CCcccccCCC-CcCHHHHHHHHHHHHHHhcc-c---HHHHHHHHHHHHHHHHHH
Confidence 3579999999998866431000 0000112333 33445667777888888664 3 344555555666666654
No 211
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=98.68 E-value=1.9e-06 Score=92.11 Aligned_cols=127 Identities=12% Similarity=0.052 Sum_probs=81.0
Q ss_pred CCceEEEEeccccccccccc----c-----ccccCCCcEEEecccccC--CCcccccccc----eEEeccccccC-CCcc
Q psy8733 272 PEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSNFL--SRKFDVSKFG----VIIAGAQKNIG-PAGI 335 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs~G--~~pIDv~~~g----vl~asaqK~lG-P~Gl 335 (621)
+++++|.+..+.+.+|+..+ + +++++|+++|+|-+++-. .....++.++ ++.+| |.+| +-.+
T Consensus 201 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~~~~~~~~~~~~di~t~s--K~~~~G~~i 278 (434)
T 3l44_A 201 HEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMYGGAQDLLGVTPDLTALG--KVIGGGLPI 278 (434)
T ss_dssp GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSSSCHHHHHTCCCSEEEEE--GGGGTTSSC
T ss_pred CCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccccHHHHHcCCCCCeeehh--hhhcCCcCe
Confidence 45778888888888888876 2 456899999999999721 1111122222 44444 9996 4568
Q ss_pred EEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 336 TVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 336 g~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
|.++.++++++.+.+..+. ....+ .++|..+..+..++|+.+.+. .+.++.+++.+++++.|.++
T Consensus 279 G~~~~~~~i~~~~~~~~~~--------~~~~t-~~~~~~a~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~~ 343 (434)
T 3l44_A 279 GAYGGKKEIMEQVAPLGPA--------YQAGT-MAGNPASMASGIACLEVLQQE----GLYEKLDELGATLEKGILEQ 343 (434)
T ss_dssp EEEEECHHHHTTBTTTSSB--------CCCCT-TTTCHHHHHHHHHHHHHHTST----THHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEcHHHHHhhccCCCc--------ccCCC-CCcCHHHHHHHHHHHHHHHcc----cHHHHHHHHHHHHHHHHHHH
Confidence 9999999998765432111 01223 345556667777888877553 44556666677777777653
No 212
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=98.66 E-value=1.8e-07 Score=100.70 Aligned_cols=129 Identities=7% Similarity=0.068 Sum_probs=74.8
Q ss_pred ceEEEEecccc-ccccccc---c-----ccccCCCcEEEecccccC-----------CCcccc-------ccc-ceEEec
Q psy8733 274 ASYLYYCDNET-VDGVEFN---Y-----IPDSQGIPLVSDMSSNFL-----------SRKFDV-------SKF-GVIIAG 325 (621)
Q Consensus 274 t~~V~~thnET-~tGv~~p---~-----i~~~~g~llvvDavSs~G-----------~~pIDv-------~~~-gvl~as 325 (621)
.++|.+++..+ .+|...+ + +++++|+++|+|.+++.| .....+ ..+ |++++|
T Consensus 175 ~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~S 254 (456)
T 2ez2_A 175 IAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTMS 254 (456)
T ss_dssp EEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEEE
T ss_pred eeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEEe
Confidence 48888885554 8898876 2 456899999999999874 111111 122 466678
Q ss_pred cccccCCCccEEEEE-chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Q psy8733 326 AQKNIGPAGITVVIV-REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSV 404 (621)
Q Consensus 326 aqK~lGP~Glg~liv-r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~ 404 (621)
++|+.|++..|+++. ++++.+++......+.. ...+.+.+...+.++ ++..+... + +...++.+++.+
T Consensus 255 ~kk~~~~~~gG~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~a~--a~~~~~~~-~-~~~~~~~~~~~~ 323 (456)
T 2ez2_A 255 GKKDCLVNIGGFLCMNDDEMFSSAKELVVVYEG-------MPSYGGLAGRDMEAM--AIGLREAM-Q-YEYIEHRVKQVR 323 (456)
T ss_dssp TTTTTCCSSCEEEEESCHHHHHHHHHHHHHHTC-------CTTTTTCCHHHHHHH--HHHHHHHT-C-HHHHHHHHHHHH
T ss_pred CcccCCCCceeEEEECCHHHHHHHHHHHhhccC-------cccccCcchhHHHHH--HHHHHHHh-H-HHHHHHHHHHHH
Confidence 899987444688888 57777655321110000 011222222233332 22222222 1 456667777888
Q ss_pred HHHHHHHcc
Q psy8733 405 LLYQEIDNS 413 (621)
Q Consensus 405 ~L~e~L~~~ 413 (621)
++++.|.+.
T Consensus 324 ~l~~~L~~~ 332 (456)
T 2ez2_A 324 YLGDKLKAA 332 (456)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHhcC
Confidence 999999875
No 213
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=98.66 E-value=8.7e-07 Score=94.90 Aligned_cols=126 Identities=10% Similarity=0.087 Sum_probs=79.4
Q ss_pred CCceEEEEeccccccccccc----c-----ccccCCCcEEEecccccC--CCccccccc----ceEEeccccccC-CCcc
Q psy8733 272 PEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSNFL--SRKFDVSKF----GVIIAGAQKNIG-PAGI 335 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs~G--~~pIDv~~~----gvl~asaqK~lG-P~Gl 335 (621)
+++++|.+..+.+.+|+..+ + +++++|+++|+|-+++-. ....-.+.+ +++.+| |.+| .-.+
T Consensus 199 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~~~~~~~~~~~~di~t~s--K~~~~G~~i 276 (429)
T 3k28_A 199 DDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRVAYNCGQGYYGVTPDLTCLG--KVIGGGLPV 276 (429)
T ss_dssp GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTSSTTHHHHHHTCCCSEEEEC--GGGGTTSCC
T ss_pred CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccccccCcchHHHHhCCCCceehhh--hhhcCCCCe
Confidence 45778888887777888876 2 456899999999998611 111112222 255444 9996 4568
Q ss_pred EEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 336 TVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 336 g~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
|+++.++++++.+.+..+. ...+++ ++|..+..+..++|+.+. +++.++.+++.+++++.|.++
T Consensus 277 G~~~~~~~~~~~~~~~~~~--------~~~~t~-~~~~~a~aaa~aal~~~~-----~~~~~~~~~~~~~l~~~L~~~ 340 (429)
T 3k28_A 277 GAYGGKAEIMRQVAPSGPI--------YQAGTL-SGNPLAMAAGYETLVQLT-----PESYVEFERKAEMLEAGLRKA 340 (429)
T ss_dssp EEEEECHHHHTTBTTTSSB--------CCCCTT-TTCHHHHHHHHHHHHTCC-----HHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcHHHHhhhccCCCc--------cccCCC-CCChHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 9999999998765431110 012233 344555555555665432 567777888888888888764
No 214
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=98.09 E-value=3.1e-09 Score=112.24 Aligned_cols=133 Identities=11% Similarity=0.120 Sum_probs=89.9
Q ss_pred CCceEEEEecccccccccccc--------ccccCCCcEEEecccccCCC----cccc---cc--cc--eEEeccccccCC
Q psy8733 272 PEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSNFLSR----KFDV---SK--FG--VIIAGAQKNIGP 332 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs~G~~----pIDv---~~--~g--vl~asaqK~lGP 332 (621)
+++++|.+++..+.+|...+. +++++|+++|+|.+.+.+.. +.++ +. .+ +++.|.+|++|.
T Consensus 163 ~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 242 (392)
T 3b1d_A 163 NDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNI 242 (392)
Confidence 568889899999999998762 34578999999999887432 2223 21 33 778899999986
Q ss_pred Cc--cEEEEEchh-HHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHH
Q psy8733 333 AG--ITVVIVRED-LLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQE 409 (621)
Q Consensus 333 ~G--lg~livr~~-ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~ 409 (621)
+| +|+++.+++ +.+.+... .....+.+++....+++.++|+.. +. .++++.++.+++.+++.+.
T Consensus 243 ~G~r~G~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~a~~~~l~~~-~~-~~~~~~~~~~~~~~~l~~~ 309 (392)
T 3b1d_A 243 AGTKNSYAIIENPTLCAQFKHQ-----------QLVNNHHEVSSLGYIATETAYRYG-KP-WLVALKAVLEENIQFAVEY 309 (392)
Confidence 66 688888654 65544221 011223455666666666676632 22 4778888888888889888
Q ss_pred HHc-cCCcc
Q psy8733 410 IDN-SDKFY 417 (621)
Q Consensus 410 L~~-~~g~~ 417 (621)
|++ ++|+.
T Consensus 310 l~~~~~~~~ 318 (392)
T 3b1d_A 310 FAQEAPRLK 318 (392)
Confidence 887 55543
No 215
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=98.64 E-value=1.5e-06 Score=92.90 Aligned_cols=126 Identities=11% Similarity=0.022 Sum_probs=81.7
Q ss_pred CCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc---cCCCcccccccc----eEEeccccccC-CCc
Q psy8733 272 PEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN---FLSRKFDVSKFG----VIIAGAQKNIG-PAG 334 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs---~G~~pIDv~~~g----vl~asaqK~lG-P~G 334 (621)
+++++|.+.++...+|+..+ + +++++|+++|+|-+++ .|. ...++.++ ++.+| |.+| .-.
T Consensus 199 ~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~-~~~~~~~~~~pdi~t~s--K~~~~G~~ 275 (429)
T 4e77_A 199 QEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVAL-AGAQDYYHVIPDLTCLG--KIIGGGMP 275 (429)
T ss_dssp TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBT-TCHHHHTTCCCSEEEEE--GGGGTTSC
T ss_pred CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCc-chHHHhcCCCCCeeeec--ccccCCCC
Confidence 46788888887777888877 3 4568999999999998 332 22233332 55444 9996 335
Q ss_pred cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 335 ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 335 lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
+|+++.++++++.+.+.... ...++ .++|..+..+..++|+.+.+. .+.++.+++.+++++.|.++
T Consensus 276 ~G~~~~~~~~~~~l~~~~~~--------~~~~t-~~~~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~~ 341 (429)
T 4e77_A 276 VGAFGGRREVMNALAPTGPV--------YQAGT-LSGNPIAMAAGFACLTEISQV----GVYETLTELTDSLATGLRHA 341 (429)
T ss_dssp CEEEEECHHHHTTBTTTSSB--------CC--C-CCCCHHHHHHHHHHHHHHTST----THHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECHHHHHHhccCCCc--------cccCC-CCCCHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHHHHHHHH
Confidence 88999999998765431110 01122 356677788888889988543 44556666666777766653
No 216
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=98.64 E-value=2.5e-06 Score=92.96 Aligned_cols=129 Identities=12% Similarity=0.116 Sum_probs=84.4
Q ss_pred CCceEEEEec-cccccccccc----c-----ccccCCCcEEEecccc-cCC--Ccccccccc----eEEeccccccCC--
Q psy8733 272 PEASYLYYCD-NETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLS--RKFDVSKFG----VIIAGAQKNIGP-- 332 (621)
Q Consensus 272 ~~t~~V~~th-nET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~--~pIDv~~~g----vl~asaqK~lGP-- 332 (621)
+++++|.+.. ..+.+|+..+ + +++++|+++|+|-+++ +|- ..+-++.++ ++.+ -|.+|.
T Consensus 232 ~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdiit~--sK~l~gG~ 309 (457)
T 3tfu_A 232 GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIMCV--GKALTGGY 309 (457)
T ss_dssp GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEE--CGGGGTTS
T ss_pred CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEEEE--ChhhhCCC
Confidence 4678888877 6777898875 2 4568999999999987 542 222333333 5544 499964
Q ss_pred CccEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc
Q psy8733 333 AGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN 412 (621)
Q Consensus 333 ~Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~ 412 (621)
..+|.++.++++.+.+....+.- .....++ +.|..+.++..++|+.+.++ .+.++.+++.+++++.|.+
T Consensus 310 ~~lG~v~~~~~i~~~~~~~~~~~------~~~~~t~-~~n~~a~aaa~aaL~~~~~~----~~~~~~~~~~~~l~~~L~~ 378 (457)
T 3tfu_A 310 LSLAATLCTADVAHTISAGAAGA------LMHGPTF-MANPLACAVSVASVELLLGQ----DWRTRITELAAGLTAGLDT 378 (457)
T ss_dssp SCCEEEEEEHHHHHHHHHSSSCS------CCCCCTT-TTCHHHHHHHHHHHHHHHTS----CHHHHHHHHHHHHHHHHGG
T ss_pred cceEEEEEcHHHHHHhhccCCCc------eeEecCC-CcCHHHHHHHHHHHHHHhhh----HHHHHHHHHHHHHHHHHHH
Confidence 46899999999987663111110 0112334 34555666777889988764 3466677788888888887
Q ss_pred c
Q psy8733 413 S 413 (621)
Q Consensus 413 ~ 413 (621)
+
T Consensus 379 l 379 (457)
T 3tfu_A 379 A 379 (457)
T ss_dssp G
T ss_pred H
Confidence 5
No 217
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=98.57 E-value=5e-06 Score=92.95 Aligned_cols=79 Identities=14% Similarity=0.294 Sum_probs=60.3
Q ss_pred CCCCceEEEEecccccccccccc--------cc--ccCCCcEEEecccccCCC-ccccccc--c--eEEeccccccCCCc
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IP--DSQGIPLVSDMSSNFLSR-KFDVSKF--G--VIIAGAQKNIGPAG 334 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~--~~~g~llvvDavSs~G~~-pIDv~~~--g--vl~asaqK~lGP~G 334 (621)
+++++++|++|+..|.||...+. ++ +++|+++|+|.+.+-... +..+... + +++.|-.|.+|.+|
T Consensus 242 ~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~G 321 (546)
T 2zy4_A 242 KDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDFQSLFAICPENTLLVYSFSKYFGATG 321 (546)
T ss_dssp GSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCCCHHHHCGGGEEEEEESTTTTTCGG
T ss_pred hCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccCcCHHHhCCCCEEEEEeCccccCCCC
Confidence 35679999999999999999873 34 578999999999875432 2222211 3 88999999999899
Q ss_pred --cEEEEEchh-HHhhh
Q psy8733 335 --ITVVIVRED-LLEYA 348 (621)
Q Consensus 335 --lg~livr~~-ll~~~ 348 (621)
+|+++.+++ +++++
T Consensus 322 lRiG~~~~~~~~l~~~l 338 (546)
T 2zy4_A 322 WRLGVVAAHQQNVFDLA 338 (546)
T ss_dssp GCEEEEEEESSCHHHHH
T ss_pred cceEEEEECCHHHHHHH
Confidence 699999886 66654
No 218
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=98.54 E-value=1.4e-05 Score=86.48 Aligned_cols=134 Identities=13% Similarity=0.125 Sum_probs=79.9
Q ss_pred CCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCCC--cccccccc----eEEeccccccCC--C
Q psy8733 272 PEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLSR--KFDVSKFG----VIIAGAQKNIGP--A 333 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~~--pIDv~~~g----vl~asaqK~lGP--~ 333 (621)
+++++|.+..+.+.+|+..+ + +++++|+++|+|-+++ +|-. ..-.+.++ ++++| |.+|. -
T Consensus 220 ~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~t~s--K~l~gG~~ 297 (460)
T 3gju_A 220 ETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLITIA--KGLTSAYA 297 (460)
T ss_dssp GGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEEC--GGGTTTSS
T ss_pred CCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeeee--hhhcCCCC
Confidence 45778888888888888665 1 4568999999999988 5422 22233333 55555 99964 4
Q ss_pred ccEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCC-HHHHHHHHHHHHHHHHHHHHc
Q psy8733 334 GITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGG-LAKMEQNSLQKSVLLYQEIDN 412 (621)
Q Consensus 334 Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gG-l~~i~~r~~~la~~L~e~L~~ 412 (621)
.+|.++.++++.+.+...... . .......++ +.|..+.++..++|+.+.++ + ++.+.+....+.+.|.+.+++
T Consensus 298 ~lg~v~~~~~i~~~~~~~~~~---~-~~~~~~~t~-~~~~~~~aaa~aal~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~ 371 (460)
T 3gju_A 298 PLSGVIVADRVWQVLVQGSDK---L-GSLGHGWTY-SAHPICVAAGVANLELIDEM-DLVTNAGETGAYFRAELAKAVGG 371 (460)
T ss_dssp CCEEEEEEHHHHHHHHHHHHH---H-CSCSCCCTT-TTCHHHHHHHHHHHHHHHHT-THHHHHHHHHHHHHHHHHHHHTT
T ss_pred CeEEEEECHHHHHHHhccccc---c-cccccCCCC-CCCHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhc
Confidence 589999999998765310000 0 001112333 33445667777888888765 4 344444444444444444444
Q ss_pred c
Q psy8733 413 S 413 (621)
Q Consensus 413 ~ 413 (621)
.
T Consensus 372 ~ 372 (460)
T 3gju_A 372 H 372 (460)
T ss_dssp S
T ss_pred C
Confidence 3
No 219
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=98.52 E-value=1.2e-05 Score=87.13 Aligned_cols=123 Identities=11% Similarity=0.137 Sum_probs=76.8
Q ss_pred CceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCC--Ccccccccc----eEEeccccccCC-Ccc
Q psy8733 273 EASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLS--RKFDVSKFG----VIIAGAQKNIGP-AGI 335 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~--~pIDv~~~g----vl~asaqK~lGP-~Gl 335 (621)
++++|.+..+....|+..+ + +++++|+++|+|-+++ +|- ...-.+.++ ++.+| |.+|+ -.+
T Consensus 227 ~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~t~s--K~l~~G~~i 304 (451)
T 3oks_A 227 NLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLIVTA--KGIAGGLPL 304 (451)
T ss_dssp GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEEEEC--GGGGTTSSC
T ss_pred CEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCeeeeh--hhhhCCcce
Confidence 4667777777666777765 2 4568999999999987 432 122333333 55554 99964 347
Q ss_pred EEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 336 TVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 336 g~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
|.++.++++.+.+.+. ....+++. |....++..++|+.+.+. .+.++.+++.+++++.|.++
T Consensus 305 G~v~~~~~~~~~~~~~-----------~~~~t~~~-~~~~~aaa~aal~~~~~~----~~~~~~~~~~~~l~~~L~~~ 366 (451)
T 3oks_A 305 SAVTGRAEIMDSPHVS-----------GLGGTYGG-NPIACAAALATIETIESE----GLVARAQQIEKIMKDRLGRL 366 (451)
T ss_dssp EEEEEEHHHHTCSCTT-----------SBCCSSSS-CHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECHHHHhhhcCC-----------CcCCCCCC-CHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHHHHHH
Confidence 8999999987654321 12234443 445566667788887664 34455555666666666543
No 220
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=98.50 E-value=4.2e-06 Score=90.76 Aligned_cols=122 Identities=9% Similarity=0.126 Sum_probs=74.0
Q ss_pred CceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCCC--ccccccc----ceEEeccccccCC-Ccc
Q psy8733 273 EASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLSR--KFDVSKF----GVIIAGAQKNIGP-AGI 335 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~~--pIDv~~~----gvl~asaqK~lGP-~Gl 335 (621)
++++|.+..+....|+..+ + +++++|+++|+|-+++ +|-. ..-.+.+ +++.+| |.+|+ -.+
T Consensus 225 ~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~t~s--K~~~~G~~~ 302 (453)
T 4ffc_A 225 SLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIVTMA--KGIAGGMPL 302 (453)
T ss_dssp GEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEEEEC--GGGGTTSSC
T ss_pred CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchHhhh--hhhcCCcCe
Confidence 4566666666666677765 1 4568999999999987 4321 1222333 255555 99964 348
Q ss_pred EEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc
Q psy8733 336 TVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN 412 (621)
Q Consensus 336 g~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~ 412 (621)
|.++.++++.+.+.+. ....+++. |.....+..++|+.+.+. + +.++.+++.+++++.|.+
T Consensus 303 G~~~~~~~i~~~~~~~-----------~~~~t~~~-~~~~~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~~l~~ 363 (453)
T 4ffc_A 303 SAVTGRAELMDAVYAG-----------GLGGTYGG-NPVTCAAAVAALGVMREL-D---LPARARAIEASVTSRLSA 363 (453)
T ss_dssp EEEEEEHHHHTTSCTT-----------SSCCSSSS-CHHHHHHHHHHHHHHHHT-T---HHHHHHHHHHHHHHHHHH
T ss_pred EEEEECHHHHhhhccc-----------CcCCCCCc-CHHHHHHHHHHHHHhhhh-h---HHHHHHHHHHHHHHHHHH
Confidence 8999999988755321 12334443 344556667788887664 3 344445555566665554
No 221
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=98.48 E-value=7.5e-06 Score=89.60 Aligned_cols=126 Identities=14% Similarity=0.151 Sum_probs=82.4
Q ss_pred CCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCCC--cccccccc----eEEeccccccCC--C
Q psy8733 272 PEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLSR--KFDVSKFG----VIIAGAQKNIGP--A 333 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~~--pIDv~~~g----vl~asaqK~lGP--~ 333 (621)
+++++|.+..+...+|+..+ + +++++|+++|+|-+++ +|-. ..-.+.++ ++++| |.+|- -
T Consensus 222 ~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t~s--K~l~gg~~ 299 (472)
T 3hmu_A 222 NRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMTIA--KGLSSGYA 299 (472)
T ss_dssp GGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEEEC--GGGTTTSS
T ss_pred CCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceeeec--hhhhcCCc
Confidence 35677777777777888775 2 4568999999999987 5422 22223333 66665 99963 4
Q ss_pred ccEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHH-HHHHHHHHHHHc
Q psy8733 334 GITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSL-QKSVLLYQEIDN 412 (621)
Q Consensus 334 Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~-~la~~L~e~L~~ 412 (621)
.+|.++.++++.+.+.+ .+ ....++++. |..+..+..++|+.+.++ .+.++.+ ++.+++++.|++
T Consensus 300 plG~v~~~~~i~~~~~~-~~--------~~~~~t~~~-np~a~aAa~aaL~~~~~~----~~~~~~~~~~~~~l~~~L~~ 365 (472)
T 3hmu_A 300 PIGGSIVCDEVAHVIGK-DE--------FNHGYTYSG-HPVAAAVALENLRILEEE----NILDHVRNVAAPYLKEKWEA 365 (472)
T ss_dssp CCEEEEEEHHHHHHHTT-SC--------BCCCCTTTT-CHHHHHHHHHHHHHHHHT----THHHHHHHTHHHHHHHHHHG
T ss_pred ceEEEEECHHHHHhccc-CC--------ccccCCCCC-CHHHHHHHHHHHHHHHHh----HHHHHHHHHHHHHHHHHHHH
Confidence 58999999999887621 11 112334433 344566667789888664 3455666 777888888876
Q ss_pred c
Q psy8733 413 S 413 (621)
Q Consensus 413 ~ 413 (621)
+
T Consensus 366 l 366 (472)
T 3hmu_A 366 L 366 (472)
T ss_dssp G
T ss_pred H
Confidence 5
No 222
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=98.43 E-value=1.1e-05 Score=87.48 Aligned_cols=124 Identities=17% Similarity=0.160 Sum_probs=75.6
Q ss_pred CCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCCC--cccccccc----eEEeccccccCC--C
Q psy8733 272 PEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLSR--KFDVSKFG----VIIAGAQKNIGP--A 333 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~~--pIDv~~~g----vl~asaqK~lGP--~ 333 (621)
+++++|.+..+.+.+|+..+ + +++++|+++|+|-+++ +|-. ..-.+.++ ++++| |.+|. -
T Consensus 218 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~t~s--K~l~gg~~ 295 (459)
T 4a6r_A 218 DKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWFGHQHFGFQPDLFTAA--KGLSSGYL 295 (459)
T ss_dssp GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEEEEC--GGGGTTSS
T ss_pred CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCeeehh--hhhcCCCC
Confidence 35677777777777788765 2 4568999999999987 5322 22223333 66655 99963 5
Q ss_pred ccEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHH-HHHHHHHHHH
Q psy8733 334 GITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSL-QKSVLLYQEI 410 (621)
Q Consensus 334 Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~-~la~~L~e~L 410 (621)
.+|.++.++++.+.+....+ .....+++ .|..+.++..++|+.+.++ + +.++.+ ++.+++++.|
T Consensus 296 ~lg~v~~~~~i~~~~~~~~~--------~~~~~t~~-~~~~~~aaa~aal~~~~~~-~---~~~~~~~~~~~~~~~~l 360 (459)
T 4a6r_A 296 PIGAVFVGKRVAEGLIAGGD--------FNHGFTYS-GHPVCAAVAHANVAALRDE-G---IVQRVKDDIGPYMQKRW 360 (459)
T ss_dssp CCEEEEECHHHHHHHHHHCT--------THHHHHHC-SCHHHHHHHHHHHHHHHHT-C---HHHHHHHTHHHHHHHHH
T ss_pred CccceeeCHHHHHHhhcCCC--------cccCCCCC-CCHHHHHHHHHHHHHHhcc-h---HHHHHHHHHHHHHHHHH
Confidence 68999999998876531100 00112333 3445566667788888665 3 333444 4555555555
No 223
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=98.35 E-value=2e-05 Score=86.20 Aligned_cols=132 Identities=12% Similarity=0.071 Sum_probs=84.8
Q ss_pred CCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCCC--ccccc-cc----ceEEeccccccC-C-
Q psy8733 272 PEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLSR--KFDVS-KF----GVIIAGAQKNIG-P- 332 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~~--pIDv~-~~----gvl~asaqK~lG-P- 332 (621)
+++++|.+..+...+|+..+ + +++++|+++|+|-+++ +|-. ..-.+ .+ |++++| |.+| .
T Consensus 220 ~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t~s--K~l~~G~ 297 (476)
T 3i5t_A 220 DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIITFA--KGVTSGY 297 (476)
T ss_dssp GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEEEC--GGGGTTS
T ss_pred CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhhhh--hhhcCCC
Confidence 45788888888788887655 2 4568999999999987 5321 22233 33 366665 9996 3
Q ss_pred CccEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHc
Q psy8733 333 AGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDN 412 (621)
Q Consensus 333 ~Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~ 412 (621)
-.+|.++.++++.+.+.+.... .. .....++++ .|..+..+..++|+.+.++ .+.++.+++.+++++.|.+
T Consensus 298 ~plg~v~~~~~i~~~~~~~~~~---~~-~~~~~~t~~-~np~a~aAa~aaL~~~~~~----~~~~~~~~~~~~l~~~L~~ 368 (476)
T 3i5t_A 298 VPLGGLAISEAVLARISGENAK---GS-WFTNGYTYS-NQPVACAAALANIELMERE----GIVDQAREMADYFAAALAS 368 (476)
T ss_dssp SCCEEEEECHHHHHTTSGGGCT---TC-EECCCCTTT-TCHHHHHHHHHHHHHHHHT----THHHHHHHHHHHHHHHHHT
T ss_pred cCeEEEEECHHHHHHHhcCCcc---cc-cccccCCCC-cCHHHHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHH
Confidence 4579999999998765431000 00 001223443 3445677777889888764 4566677788888888876
Q ss_pred cC
Q psy8733 413 SD 414 (621)
Q Consensus 413 ~~ 414 (621)
+.
T Consensus 369 l~ 370 (476)
T 3i5t_A 369 LR 370 (476)
T ss_dssp TT
T ss_pred Hh
Confidence 53
No 224
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=98.25 E-value=1.4e-05 Score=86.03 Aligned_cols=127 Identities=8% Similarity=-0.045 Sum_probs=80.7
Q ss_pred CCceEEEEeccccccccccc----c-----ccccCCCcEEEecccccCCC---ccccccc----ceEEeccccccC-CCc
Q psy8733 272 PEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSNFLSR---KFDVSKF----GVIIAGAQKNIG-PAG 334 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs~G~~---pIDv~~~----gvl~asaqK~lG-P~G 334 (621)
+++++|.+.++.+.+|+..| + +++++|+++|+|.+++ |.+ ...++.+ |++ +..|++| .-.
T Consensus 200 ~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~--s~sK~l~~G~~ 276 (453)
T 2cy8_A 200 SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GFRVGNHGMQALLDVQPDLT--CLAKASAGGLP 276 (453)
T ss_dssp GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTCTTHHHHHHTCCCSEE--EEEGGGGTTSS
T ss_pred CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-ccccCchhhhHHhCCCCcEE--EEChhhhCCcc
Confidence 36788888777777898776 3 4568999999999998 321 1122222 344 4459996 345
Q ss_pred cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHH-HHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 335 ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAW-IKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 335 lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~-i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
+|+++.++++++.+.+.... . ....+++ ++|....++..++|+. + +. .+.++.+++.+++++.|+++
T Consensus 277 ~G~v~~~~~~~~~l~~~~~~-----~-~~~~~t~-~~n~~~~aa~~aal~~~~-~~----~~~~~~~~~~~~l~~~L~~~ 344 (453)
T 2cy8_A 277 GGILGGREDVMGVLSRGSDR-----K-VLHQGTF-TGNPITAAAAIAAIDTIL-ED----DVCAKINDLGQFAREAMNHL 344 (453)
T ss_dssp CEEEEECHHHHTTSSSCC---------------C-CCCHHHHHHHHHHHHHHH-HT----THHHHHHHHHHHHHHHHHHH
T ss_pred eEEEechHHHHHHhccccCC-----C-ceeCCCC-CCCHHHHHHHHHHHHHHh-hh----hHHHHHHHHHHHHHHHHHHH
Confidence 89999999988765431000 0 0011233 3455666777888887 7 43 34567777888888888764
No 225
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=98.25 E-value=6.9e-06 Score=86.94 Aligned_cols=134 Identities=15% Similarity=0.204 Sum_probs=82.4
Q ss_pred CCceEEEEecccccccccccc--------ccccCCCcEEEecccc-cCCCc-----ccc----cccc--eEEeccccccC
Q psy8733 272 PEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSSN-FLSRK-----FDV----SKFG--VIIAGAQKNIG 331 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavSs-~G~~p-----IDv----~~~g--vl~asaqK~lG 331 (621)
++++++.+++..|.||...+. +++++|+++|+|.+.+ ++..+ ..+ +..+ +++.|..|.+|
T Consensus 182 ~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 261 (409)
T 4eu1_A 182 EGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNFG 261 (409)
T ss_dssp TTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTSS
T ss_pred CCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCccccc
Confidence 346667778888999999883 3467899999999944 43322 111 1122 66777789999
Q ss_pred CCc--cEEE--EE-chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHH-----hhCCHHHHHHHHHH
Q psy8733 332 PAG--ITVV--IV-REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK-----RQGGLAKMEQNSLQ 401 (621)
Q Consensus 332 P~G--lg~l--iv-r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~-----~~gGl~~i~~r~~~ 401 (621)
.+| +|++ ++ ++++.+.+.. . +.. . ......++|.....++..+|+... .. .++.+.++.++
T Consensus 262 ~~G~riG~~~~v~~~~~~~~~l~~---~---~~~-~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~ 332 (409)
T 4eu1_A 262 LYGHRCGALHISTASAEEAKRLVS---Q---LAL-L-IRPMYNNPPLYGAWVVSSILKDPQLTALWKK-ELKQMSSRIAE 332 (409)
T ss_dssp CGGGCCEEEEEECSSHHHHHHHHH---H---HHH-H-HHHHHSSCCHHHHHHHHHHHHCHHHHHHHHH-HHHHHHHHHHH
T ss_pred CccCCceEEEEEeCCHHHHHHHHH---H---HHH-H-HhhhcCCCChHHHHHHHHHhCCHHHHHHHHH-HHHHHHHHHHH
Confidence 888 6775 44 4553222210 0 000 0 012234556666666666666220 11 26788888999
Q ss_pred HHHHHHHHHHccC
Q psy8733 402 KSVLLYQEIDNSD 414 (621)
Q Consensus 402 la~~L~e~L~~~~ 414 (621)
+.+++++.|++++
T Consensus 333 ~~~~l~~~L~~~g 345 (409)
T 4eu1_A 333 VRKRLVSELKACG 345 (409)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcC
Confidence 9999999998864
No 226
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=98.23 E-value=1.5e-05 Score=85.97 Aligned_cols=135 Identities=15% Similarity=0.136 Sum_probs=82.4
Q ss_pred CCCCceEEEEeccccccccccccccccCCCcEEEecccccCCCc-cccc-ccceEEeccccccCCCc--cEEEEEc-hhH
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNYIPDSQGIPLVSDMSSNFLSRK-FDVS-KFGVIIAGAQKNIGPAG--ITVVIVR-EDL 344 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~i~~~~g~llvvDavSs~G~~p-IDv~-~~gvl~asaqK~lGP~G--lg~livr-~~l 344 (621)
+++++++|.+++-.|.||...+.+. +++..+.|...--...+ .++. +-.+++.|.+|.+|++| +|+++.+ +++
T Consensus 193 ~~~~~k~v~l~~p~NPtG~~~~~~l--~~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~~l 270 (427)
T 2hox_A 193 SNPEQYIEMVTSPNNPEGLLRHAVI--KGCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKFTGHSGSRFGWALIKDESV 270 (427)
T ss_dssp SCGGGEEEEEESSCTTTCCCCCCSS--TTCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHHTSCGGGCCEEEEECCHHH
T ss_pred hcCCceEEEEcCCCCCcccccHHHH--cCCCEEEeecccCCCCCccccCCCceEEEEeChhcCCCCCceEEEEEECCHHH
Confidence 4457899999999999999888322 24556667543211111 2222 22389999999999999 8999995 788
Q ss_pred HhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHH----HHH-----hhCCHHHHHHHHHHHHHHHHHHHHccCC
Q psy8733 345 LEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFA----WIK-----RQGGLAKMEQNSLQKSVLLYQEIDNSDK 415 (621)
Q Consensus 345 l~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~----~i~-----~~gGl~~i~~r~~~la~~L~e~L~~~~g 415 (621)
++++... .. ....+++ .....++..+|+ |+. -..=++.+.++.+++.+++++.|++++|
T Consensus 271 ~~~l~~~-------~~----~~~~~~~-~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 338 (427)
T 2hox_A 271 YNNLLNY-------MT----KNTEGTP-RETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDR 338 (427)
T ss_dssp HHHHHHH-------HH----HHTSSCC-HHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSS
T ss_pred HHHHHHH-------HH----hcCCCCC-HHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 7765321 00 0112333 333333333443 221 0001456677888888999999998866
Q ss_pred ccc
Q psy8733 416 FYE 418 (621)
Q Consensus 416 ~~~ 418 (621)
+..
T Consensus 339 ~~~ 341 (427)
T 2hox_A 339 FSY 341 (427)
T ss_dssp EEC
T ss_pred ccc
Confidence 643
No 227
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=98.22 E-value=1.2e-06 Score=90.94 Aligned_cols=101 Identities=46% Similarity=0.846 Sum_probs=85.3
Q ss_pred HHHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 449 FGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
+|++.+|.+|.+||+|+++++++++++++..+..|.+++|.....++++..|||++.++.+...|+++++.||++.+.++
T Consensus 188 ~d~~~~s~~K~~g~~G~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~ 267 (362)
T 2c0r_A 188 FGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQA 267 (362)
T ss_dssp CSEEEEETTTTTCCSSCEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CcEEEEeccccccCcCcEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 37888999999999999999999999877666667777665544566778899999999999999999988889999999
Q ss_pred HHHHHHHHHHHHhccCCcccc
Q psy8733 529 SLQKSVLLYQEIDNSDKFYEC 549 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~ 549 (621)
.+++++.+++.+++.+++|..
T Consensus 268 ~~~~~~~l~~~L~~~~~~~~~ 288 (362)
T 2c0r_A 268 NRKKASLIYDAIDQSGGFYRG 288 (362)
T ss_dssp HHHHHHHHHHHHHTSTTSSEE
T ss_pred HHHHHHHHHHHHHHcCCcccc
Confidence 999999999999876434443
No 228
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=98.21 E-value=1.9e-05 Score=84.42 Aligned_cols=126 Identities=13% Similarity=0.057 Sum_probs=83.0
Q ss_pred CceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCC-Cccccccc----ceEEeccccccCC-CccE
Q psy8733 273 EASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLS-RKFDVSKF----GVIIAGAQKNIGP-AGIT 336 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~-~pIDv~~~----gvl~asaqK~lGP-~Glg 336 (621)
++++|.+.++.+.+|+..| + +++++|+++|+|.+++ +.. ....++.+ |++ +..|++|+ -.+|
T Consensus 203 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~--s~sK~l~~G~~~G 280 (434)
T 2epj_A 203 RIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGLEGAQGYFNIEGDII--VLGKIIGGGFPVG 280 (434)
T ss_dssp GEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSSTTHHHHHHTCCCSEE--EEEGGGGTTSSCE
T ss_pred CEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCcchhhHHhCCCCCee--eecchhcCCccee
Confidence 6788888888777898876 3 4568999999999998 311 11222222 244 44599964 2379
Q ss_pred EEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 337 VVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 337 ~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
+++.++++++.+.+..+. ...+++ ++|....+++.++|+.+.+. + +.++.+++.+++++.|+++
T Consensus 281 ~v~~~~~~~~~l~~~~~~--------~~~~t~-~~~~~~~aa~~a~l~~~~~~-~---~~~~~~~~~~~l~~~L~~~ 344 (434)
T 2epj_A 281 AVAGSREVMSLLTPQGKV--------FNAGTF-NAHPITMAAGLATLKALEEE-P---VYSVSREAAKALEEAASEV 344 (434)
T ss_dssp EEEECHHHHTTBTTTSSB--------CCCCTT-TTCHHHHHHHHHHHHHHHHS-C---HHHHHHHHHHHHHHHHHHH
T ss_pred eeeecHHHHHhhccCCCc--------ccCCCC-CcCHHHHHHHHHHHHHHHhc-C---HHHHHHHHHHHHHHHHHHH
Confidence 999999988765431110 012233 35556677888899988763 3 4566777788888888764
No 229
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=98.17 E-value=2.1e-05 Score=86.06 Aligned_cols=129 Identities=14% Similarity=0.105 Sum_probs=78.0
Q ss_pred eEEEEecccccccccccc-----ccccCCCcEEEecccccCCCcc--------cccccceEEeccccccC-CCccEEEEE
Q psy8733 275 SYLYYCDNETVDGVEFNY-----IPDSQGIPLVSDMSSNFLSRKF--------DVSKFGVIIAGAQKNIG-PAGITVVIV 340 (621)
Q Consensus 275 ~~V~~thnET~tGv~~p~-----i~~~~g~llvvDavSs~G~~pI--------Dv~~~gvl~asaqK~lG-P~Glg~liv 340 (621)
.+|..+...+..|..-|+ +++++|++++||.+-..-...+ +.+..|+++.|+|||++ |.|.+++.+
T Consensus 200 ~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~~~AD~~v~S~HK~l~a~~~~~~l~~ 279 (450)
T 3bc8_A 200 LCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAG 279 (450)
T ss_dssp EEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHSCCSSCEEEEE
T ss_pred EEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcccCCCEEEECCccCCCchhccEEEEe
Confidence 334444333333466665 4578999999997755433332 11345799999999996 999999999
Q ss_pred ch-hHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC---Cc
Q psy8733 341 RE-DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD---KF 416 (621)
Q Consensus 341 r~-~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~---g~ 416 (621)
++ +.++++.. . |. +....+|. +.+..++..+-.. |+.++.++..++++++++.|.+++ |+
T Consensus 280 rd~~~~~~~~~---~---~~-----g~~s~Sps----L~l~~~l~~~G~~-g~~~~i~~~~~~a~~l~~~l~~~~~~~g~ 343 (450)
T 3bc8_A 280 FNEPFIQDISK---M---YP-----GRASASPS----LDVLITLLSLGCS-GYRKLLKERKEMFVYLSTQLKKLAEAHNE 343 (450)
T ss_dssp SCHHHHHHHHH---H---SC-----SCBCSHHH----HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCHHHHHHHHH---H---hh-----cCCcccHH----HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhHHhcCc
Confidence 64 34443321 1 11 01111232 2222233333333 677777888899999999998887 66
Q ss_pred ccC
Q psy8733 417 YEC 419 (621)
Q Consensus 417 ~~~ 419 (621)
++.
T Consensus 344 ~~l 346 (450)
T 3bc8_A 344 RLL 346 (450)
T ss_dssp CBC
T ss_pred eec
Confidence 554
No 230
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=98.08 E-value=9.2e-05 Score=78.84 Aligned_cols=127 Identities=11% Similarity=0.093 Sum_probs=84.1
Q ss_pred CCceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCC-Cccccccc----ceEEeccccccCC-Ccc
Q psy8733 272 PEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLS-RKFDVSKF----GVIIAGAQKNIGP-AGI 335 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~-~pIDv~~~----gvl~asaqK~lGP-~Gl 335 (621)
+++++|.+.++...+|+..| + + +++|+++|+|-+++ +.. ....++.+ |++ +..|.+|+ -.+
T Consensus 198 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~~~~~~~~~~~~di~--s~sK~l~~G~~~ 274 (424)
T 2e7u_A 198 EEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAFGGATELLGLKPDLV--TLGKILGGGLPA 274 (424)
T ss_dssp GGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSSTTHHHHHHTCCCSEE--EECGGGGTTSSC
T ss_pred CCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccchhHHHHHhCCCcchh--hhhhhhhCCcce
Confidence 35677888777766898776 3 7 88999999999998 311 11112222 244 44699973 248
Q ss_pred EEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 336 TVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 336 g~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
|+++.++++.+.+.+..+. ...+++ ++|..+..+..++|+.+.+. +.+.++.+++.+++++.|+++
T Consensus 275 G~~~~~~~~~~~~~~~~~~--------~~~~t~-~~~~~~~aaa~aal~~~~~~---~~~~~~~~~~~~~l~~~L~~~ 340 (424)
T 2e7u_A 275 AAYAGRREIMEKVAPLGPV--------YQAGTL-SGNPLAMAAGLATLELLEEN---PGYYAYLEDLGARLEAGLKEV 340 (424)
T ss_dssp EEEEECHHHHTTBTTTSSB--------CCCCTT-CSCHHHHHHHHHHHHHHHHC---THHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcHHHHhhhcccCCc--------ccCCCC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988765431110 012233 34455677778889988662 467788888888898888774
No 231
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=98.07 E-value=0.0002 Score=77.56 Aligned_cols=138 Identities=11% Similarity=0.113 Sum_probs=85.9
Q ss_pred CCCCceEEEEecccccccccccc--------ccccCCCcEEEeccc-ccCCCccccc---------ccc--eEEeccccc
Q psy8733 270 RDPEASYLYYCDNETVDGVEFNY--------IPDSQGIPLVSDMSS-NFLSRKFDVS---------KFG--VIIAGAQKN 329 (621)
Q Consensus 270 i~~~t~~V~~thnET~tGv~~p~--------i~~~~g~llvvDavS-s~G~~pIDv~---------~~g--vl~asaqK~ 329 (621)
..++++++..+...|+||...+. ++++++++++.|.+- .+.....+.+ ..+ +++.|.=|+
T Consensus 187 ~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~ 266 (420)
T 4h51_A 187 APDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKN 266 (420)
T ss_dssp SCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTT
T ss_pred cCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEeccccc
Confidence 45677777777777999998873 345789999999754 3433322221 112 677888999
Q ss_pred cCCCc--cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHH--HH----HhhCCHHHHHHHHHH
Q psy8733 330 IGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFA--WI----KRQGGLAKMEQNSLQ 401 (621)
Q Consensus 330 lGP~G--lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~--~i----~~~gGl~~i~~r~~~ 401 (621)
+|-+| +|.+++..+..+........ .. .-..+.+..||..+..+...++. ++ .++ ++.+.++.++
T Consensus 267 ~~~~G~RvG~~~~~~~~~~~~~~~~~~---l~--~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~--~~~m~~r~~~ 339 (420)
T 4h51_A 267 MGLYSERAGTLSLLLKDKTKRADVKSV---MD--SLIREEYTCPPAHGARLAHLILSNNELRKEWEAE--LSAMAERIRT 339 (420)
T ss_dssp SCCGGGCEEEEEEECSCHHHHHHHHHH---HH--HHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHH--HHHHHHHHHH
T ss_pred cccccCceEEEEecccCHHHHHHHHHH---HH--HhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHH--HHHHHHHHHH
Confidence 99887 88887765544322110000 00 00123455666666666555553 11 222 6888999999
Q ss_pred HHHHHHHHHHccC
Q psy8733 402 KSVLLYQEIDNSD 414 (621)
Q Consensus 402 la~~L~e~L~~~~ 414 (621)
+.+.|++.|.+.+
T Consensus 340 ~R~~l~~~L~~~g 352 (420)
T 4h51_A 340 MRRTVYDELLRLQ 352 (420)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhC
Confidence 9999999998864
No 232
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=97.99 E-value=0.00014 Score=79.78 Aligned_cols=126 Identities=16% Similarity=0.118 Sum_probs=77.4
Q ss_pred CCceEEEEecccccccccccc---------ccccCCCcEEEecccccCCCccc---ccccc----eEEeccccccC-CCc
Q psy8733 272 PEASYLYYCDNETVDGVEFNY---------IPDSQGIPLVSDMSSNFLSRKFD---VSKFG----VIIAGAQKNIG-PAG 334 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p~---------i~~~~g~llvvDavSs~G~~pID---v~~~g----vl~asaqK~lG-P~G 334 (621)
+++.+|.+=..-...|++.|- +++++|+++|+|=+|+ | +-=. .+.+| +++.+ |.+| --.
T Consensus 219 ~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t-G-R~G~~~a~e~~gv~PDi~t~g--K~lggG~P 294 (454)
T 4ao9_A 219 PEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT-S-RLAPHGLANKLGIRSDLTTLG--KYIGGGMS 294 (454)
T ss_dssp GGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG-G-GGSTTCHHHHHTCCCSEEEEE--GGGGTTSS
T ss_pred CceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc-C-CCccccchhccCCCCcEEEec--cccCCCCc
Confidence 345566554444445777662 4568999999999987 4 2111 12233 55554 8883 234
Q ss_pred cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 335 ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 335 lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
+|.+..++++.+.+.+....+ ...++++..|+. ..+..++|+.+.+. ++.++..++.++|+++|.++
T Consensus 295 iga~~~~~ei~~~~~~~~~~~-------~h~~T~~gnPla-~AAala~L~~l~~~----~~~~~~~~~g~~l~~~L~~l 361 (454)
T 4ao9_A 295 FGAFGGRADVMALFDPRTGPL-------AHSGTFNNNVMT-MAAGYAGLTKLFTP----EAAGALAERGEALRARLNAL 361 (454)
T ss_dssp CEEEEECHHHHGGGCTTTCSC-------CCCCTTTTCHHH-HHHHHHHHHHTSCH----HHHHHHHHHHHHHHHHHHHH
T ss_pred ceeeeeHHHHHHHHhhccCCc-------cccCCCCCCHHH-HHHHHHHHHHHhcc----ChhHHHHHHHHHHHHHHHHH
Confidence 889999999988765422111 124566555554 44455678888654 55667777788888877764
No 233
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=97.95 E-value=9.4e-06 Score=83.72 Aligned_cols=160 Identities=41% Similarity=0.790 Sum_probs=129.7
Q ss_pred HHHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 449 FGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
+|++.+|.+|.+||+|+++++++++++++..+..|..++++........++|||.+.++.+...++++.+.||++.+.++
T Consensus 187 ~di~~~s~sK~~~~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~ 266 (360)
T 1w23_A 187 FGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQ 266 (360)
T ss_dssp CSEEEEETTTTTSCTTCEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CCEEEEEcccccCCCCcEEEEEcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 36778899999999999999999999877655556555544433356788999999999999999999988889999999
Q ss_pred HHHHHHHHHHHHhccCCcccccCCC---CC--------c--ccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHH
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPVQA---GF--------P--LDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEA 595 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v~~---~~--------~--~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~ 595 (621)
.+++++.+++.|++.+++|.+.+++ .. . ...+|.+.++++||....|+...+.||++....++.|++
T Consensus 267 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~iRis~~~~~~~~~i 346 (360)
T 1w23_A 267 NEEKAKIIYDTIDESNGFYVGHAEKGSRSLMNVTFNLRNEELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDAC 346 (360)
T ss_dssp HHHHHHHHHHHHHTTTTSSEESSCGGGBCSSEEEEECSSHHHHHHHHHHHHHTTEESCBCCTTTCSEEEECCTTSCHHHH
T ss_pred HHHHHHHHHHHHHHccCcccccCCchhccCcEEEEEcCCCccHHHHHHHHHHCCeeeecCCCCCCeEEEEecCCCCHHHH
Confidence 9999999999999876554432111 11 1 134588889999999988887778899999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy8733 596 VILVKFMKEFRHK 608 (621)
Q Consensus 596 ~~l~~~~~~~~~~ 608 (621)
+.+++.|+++.++
T Consensus 347 ~~~~~~l~~~~~~ 359 (360)
T 1w23_A 347 IALRELMIQFKEN 359 (360)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhh
Confidence 9999999988654
No 234
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=97.08 E-value=2e-06 Score=94.57 Aligned_cols=124 Identities=14% Similarity=0.093 Sum_probs=79.3
Q ss_pred CCceEEEEeccccccccccc----c-----ccccCCCcEEEecccccCCCc---ccccccc----eEEeccccccCCCc-
Q psy8733 272 PEASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSNFLSRK---FDVSKFG----VIIAGAQKNIGPAG- 334 (621)
Q Consensus 272 ~~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs~G~~p---IDv~~~g----vl~asaqK~lGP~G- 334 (621)
+++++|.+..+...+|+..| + +++++|+++|+|-+++ + +. .-.+.+| ++. --|++|. |
T Consensus 232 ~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~~~a~~~~gv~pDi~t--~sK~lg~-G~ 306 (465)
T 2yky_A 232 HDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLSGGGAQEMLGISADLTT--LGKYIGG-GM 306 (465)
Confidence 46777777665444797665 2 4568999999999999 5 22 1122222 443 4599975 5
Q ss_pred -cEEEEEchhHHhhhCCC--CCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHH
Q psy8733 335 -ITVVIVREDLLEYALPI--TPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411 (621)
Q Consensus 335 -lg~livr~~ll~~~~~~--~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~ 411 (621)
+|+++.++++++.+.+. .+ + ...++++ .|....++..++|+.+.+. .+.++.+++.+++++.|+
T Consensus 307 piG~v~~~~~i~~~l~~~~~g~-~-------~~~~T~~-~npla~aAa~aaL~~l~~~----~~~~~~~~~~~~l~~~L~ 373 (465)
T 2yky_A 307 SFGAFGGRRDLMERFDPARDGA-F-------AHAGTFN-NNILTMSAGHAALTQIYTR----QAASDLSASGDRFRANLN 373 (465)
Confidence 78899999988765431 11 0 0123333 3344556666788888764 466777788888888887
Q ss_pred cc
Q psy8733 412 NS 413 (621)
Q Consensus 412 ~~ 413 (621)
++
T Consensus 374 ~~ 375 (465)
T 2yky_A 374 RI 375 (465)
Confidence 65
No 235
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=97.84 E-value=8.3e-05 Score=81.20 Aligned_cols=283 Identities=12% Similarity=0.095 Sum_probs=147.8
Q ss_pred CceeccCCCCCCCHHHHHHHHHHHHhhccCCCcccccccc---cHHHHHHH-HHHHHHHHHHhCCCCC-CEEEEEcCCcc
Q psy8733 51 PVINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHR---SADYTKIN-NDTQAALRELLNVPNN-YKILFLQGGGT 125 (621)
Q Consensus 51 ~~~lf~aGPs~~P~~Vlea~~~~l~~~~~~g~sv~e~shr---s~~f~~i~-~~ar~~La~Ll~~p~~-yeI~f~~gggT 125 (621)
....+.|.=--.++.|++++...|++-...|.. .+| +-++.+.+ .-|+++.++|||+... +-|=.-+-||+
T Consensus 55 ~~ieLIASEN~~S~aV~~a~gS~ltnKYaEGyP----g~RyYgGce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs 130 (490)
T 3ou5_A 55 RGLELIASENFCSRAALEALGSCLNNKYSEGYP----GKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGS 130 (490)
T ss_dssp HSEECCTTCCCCCHHHHHHHTSGGGTCCCCC--------------CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHH
T ss_pred cCceEecCCCcCCHHHHHHhcCcccccccCCCC----CccccCCChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHH
Confidence 457888888899999999999999885555532 333 44455444 4567899999999653 21222345666
Q ss_pred hhhhHHHHHHhhhccCCCCCceeEeecCCcchhHHHHHHHhhCCCCcEEEEEcChHHHHHHHHHHHhCCceeeecccccc
Q psy8733 126 GMFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTGKADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKY 205 (621)
Q Consensus 126 ~~~~a~alNlla~~~~~~~gd~Il~~~~~~~~~feav~~NL~~~g~~~~~v~tG~~~~~~~~~a~~~G~~~~~~~~~~~~ 205 (621)
. .|+.++..=+++||.|+-+. | ..| |+.+|...-...+.+..-.....
T Consensus 131 ~------AN~avy~All~PGD~ilg~~-------------l-~~G--------GHltHg~~~~~~~v~~sg~~~~~---- 178 (490)
T 3ou5_A 131 P------ANLAVYTALLQPHDRIMGLD-------------L-PDG--------GHLTHGYMSDVKRISATSIFFES---- 178 (490)
T ss_dssp H------HHHHHHHHHCC-CCCEECBC-----------------------------------------------------
T ss_pred H------HHHHHHHHHcCCCCEEEecc-------------c-CCC--------CcccccccCCCcccccccccccc----
Confidence 6 35544433356666665543 1 122 22222111000011000000000
Q ss_pred cccCCCCCC-CCCCCccccccccCccccCccchhhhHHHhhhcccccccccCCCccCCCCccccCCCCCceEEEEecccc
Q psy8733 206 VSIPDQSTW-NRDPEASYLYYCDNETVDGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNET 284 (621)
Q Consensus 206 ~~~~~~~~~-~~~~~v~~v~~~~~~~v~~~w~~~v~~e~~~~~~~~~~~~~~~~~~~ip~~~~l~i~~~t~~V~~thnET 284 (621)
..... .+.-.+| -++ .+++....++|+|.+-..-.
T Consensus 179 ----~~Y~vd~~t~~ID-------------------yd~---------------------~~~~A~~~kPklIi~G~SaY 214 (490)
T 3ou5_A 179 ----MPYKLNPKTGLID-------------------YNQ---------------------LALTARLFRPRLIIAGTSAY 214 (490)
T ss_dssp -----CBCEETTTTEEC-------------------HHH---------------------HHHHHHHHCCSEEEECCSSC
T ss_pred ----cccccCCCCCccc-------------------HHH---------------------HHHHHhhcCCCeEEECCccC
Confidence 00000 0000000 001 11122334577776655433
Q ss_pred cccccccc-----ccccCCCcEEEeccccc-----CCCcccccccceEEecccccc-CCCccEEEEEchhHHhhhCCCCC
Q psy8733 285 VDGVEFNY-----IPDSQGIPLVSDMSSNF-----LSRKFDVSKFGVIIAGAQKNI-GPAGITVVIVREDLLEYALPITP 353 (621)
Q Consensus 285 ~tGv~~p~-----i~~~~g~llvvDavSs~-----G~~pIDv~~~gvl~asaqK~l-GP~Glg~livr~~ll~~~~~~~P 353 (621)
+ -..|. |+++.|+.+++||+.-. |..|=++...|++.++.||.| ||.| |++..+++... ..+...
T Consensus 215 ~--r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~ADvVTtTTHKTLrGPrG-G~Il~~~~~~~-~~~k~~ 290 (490)
T 3ou5_A 215 A--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHADIVTTTTHKTLRGARS-GLIFYRKGVKA-VDPKTG 290 (490)
T ss_dssp C--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTCSEEEEESSSTTCSCSC-EEEEEECSEEE-ECC--C
T ss_pred c--cccCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccceEEeccccccccCCCc-eEEEecccccc-cccccc
Confidence 2 22232 56678999999998753 344555556789999999999 8997 55555554311 111111
Q ss_pred c--eeecccccc---CCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccCCcccC
Q psy8733 354 T--VFHFKINAD---NNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC 419 (621)
Q Consensus 354 ~--~ld~~~~~~---~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~g~~~~ 419 (621)
. ..++....+ -+..-+-|-...|.+++.++...... ......++..+.++.|-+.|.+.| +.+.
T Consensus 291 ~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p-~fk~Ya~qVv~NAkaLA~~L~~~G-~~vv 359 (490)
T 3ou5_A 291 REIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTP-MFREYSLQVLKNARAMADALLERG-YSLV 359 (490)
T ss_dssp CEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSH-HHHHHHHHHHHHHHHHHHHHHHTT-CEEG
T ss_pred chhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhH-hHHHHHHHHHHHHHHHHHHHHhCC-Ceee
Confidence 0 111211111 13445678888999999988876554 356778888888888888888875 5443
No 236
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=97.47 E-value=0.0009 Score=73.39 Aligned_cols=106 Identities=12% Similarity=0.114 Sum_probs=72.8
Q ss_pred ccccCCCcEEEecccccCCCccc---cc-----ccceEEeccccccC-CCccEEEEEch-hHHhhhCCCCCceeeccccc
Q psy8733 293 IPDSQGIPLVSDMSSNFLSRKFD---VS-----KFGVIIAGAQKNIG-PAGITVVIVRE-DLLEYALPITPTVFHFKINA 362 (621)
Q Consensus 293 i~~~~g~llvvDavSs~G~~pID---v~-----~~gvl~asaqK~lG-P~Glg~livr~-~ll~~~~~~~P~~ld~~~~~ 362 (621)
+++++|++++||.+-.+-...++ .+ +.|+++.|+||++. |-|-++++.++ ++++++...
T Consensus 241 Ich~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~vVqS~HK~llvpIGG~ii~~~d~e~l~~~~~~----------- 309 (501)
T 3hl2_A 241 ICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKM----------- 309 (501)
T ss_dssp HHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHHT-----------
T ss_pred HHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEEEecccccceeecCceEEEeCCHHHHHHHHHh-----------
Confidence 45689999999965433221111 11 25689999999996 87877776664 455544221
Q ss_pred cCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHccC
Q psy8733 363 DNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSD 414 (621)
Q Consensus 363 ~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~~ 414 (621)
.++|.+.+..+.+-.++..+-.. |+.++.++..+++++|++.|.++.
T Consensus 310 ----yPGr~S~Spsldl~~tLL~lGr~-Gy~~ll~e~~ela~~L~~~L~~la 356 (501)
T 3hl2_A 310 ----YPGRASASPSLDVLITLLSLGSN-GYKKLLKERKEMFSYLSNQIKKLS 356 (501)
T ss_dssp ----SCSCBCSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCcHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 12444455566566667777666 899999999999999999999864
No 237
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=97.45 E-value=4.9e-05 Score=77.91 Aligned_cols=97 Identities=21% Similarity=0.307 Sum_probs=77.7
Q ss_pred HHHHHhhcccccc-cCCcEEeeecHhHhhhcCCC------CCceee---eeecccCCCccCCCchhHHHHHHHHHHHHHh
Q psy8733 449 FGVIIAGAQKNIG-PAGITVVIVREDLLEYALPI------TPTVFH---FKINADNNSVYNTPPTFVVHVIQRVFAWIKR 518 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl~v~iv~~~~l~~~~~~------~p~~~~---y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~ 518 (621)
.|++.+|.+|.+| |+|+++++++++++++..+. .+..++ |......++++.|||++.++.+...++|+.+
T Consensus 182 ~d~~~~s~~K~~~~~~G~g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~ 261 (362)
T 3ffr_A 182 IDSVFFSVQKCFGLPAGLGVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQ 261 (362)
T ss_dssp CSEEEEETTSTTCCCSCCEEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEecccccCCCCceEEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHH
Confidence 5788899999999 99999999999997653321 122222 2223445777999999999999999999988
Q ss_pred cCChHHHHHHHHHHHHHHHHHHhccCCc
Q psy8733 519 QGGLAKMEQNSLQKSVLLYQEIDNSDKF 546 (621)
Q Consensus 519 ~gg~~~~~~~~~~ka~~lY~~id~~~~~ 546 (621)
.| ++.+.++.++.++.+++.|++.+++
T Consensus 262 ~~-~~~~~~~~~~~~~~l~~~L~~~~g~ 288 (362)
T 3ffr_A 262 IS-ADGIRKQTEEKAALINTYIESSKVF 288 (362)
T ss_dssp HC-HHHHHHHHHHHHHHHHHHHHHCSSE
T ss_pred cc-HHHHHHHHHHHHHHHHHHHHHccCc
Confidence 76 9999999999999999999887654
No 238
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=97.35 E-value=0.00024 Score=74.86 Aligned_cols=159 Identities=18% Similarity=0.246 Sum_probs=122.9
Q ss_pred HHHHHhhcccccccC-CcEEeeecHhHhhhcC------CCCCceeeeeeccc---CCCccCCCchhHHHHHHHHHHHHHh
Q psy8733 449 FGVIIAGAQKNIGPA-GITVVIVREDLLEYAL------PITPTVFHFKINAD---NNSVYNTPPTFVVHVIQRVFAWIKR 518 (621)
Q Consensus 449 ~~~~~a~~qk~~Gpa-Gl~v~iv~~~~l~~~~------~~~p~~~~y~~~~~---~~s~~nTP~~~~iy~~~~vl~~~~~ 518 (621)
.|++.+|.+|.+|+. |+++++++++++++.. +..|..+++....+ .+.+++|||++.++.+...|+++.+
T Consensus 213 ~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~ 292 (398)
T 2fyf_A 213 TDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVG 292 (398)
T ss_dssp CSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 567788999999977 6999999999987531 22344444432222 2578899999999999999999998
Q ss_pred cCChHHHHHHHHHHHHHHHHHHhccCCcccccC--C--CCC---------c-ccHHHHHHHHHccCccccCCCCC--Ccc
Q psy8733 519 QGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPV--Q--AGF---------P-LDELFLKEAKAHNMIQLKGHRLV--GGI 582 (621)
Q Consensus 519 ~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~~v--~--~~~---------~-~~~~~~~~~~~~~i~~~~g~~~~--~~~ 582 (621)
.|+++.+.++.+++++.+++.|++.+++ .... . ... . -..+|.+.+.++||....||+.. +.|
T Consensus 293 ~g~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~~~~~~~i 371 (398)
T 2fyf_A 293 NGGLDWAVKRTADSSQRLYSWAQERPYT-TPFVTDPGLRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEPYRKLGRNQL 371 (398)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHHSTTE-EESCCSGGGBCSSEEEEEECTTSCHHHHHHHHHHTTCBCCSCCTTTCSSEE
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHcCCc-eeccCChhhcCCcEEEEECCCCCCHHHHHHHHHHCCcEEecCcccCCCCEE
Confidence 9999999999999999999999887543 2211 1 111 1 23568899999999988888763 459
Q ss_pred ceeeccCCCHHHHHHHHHHHHHHHHH
Q psy8733 583 RASIYNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 583 r~~~~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
|++.-+.++.||++++++.|+++.++
T Consensus 372 Ris~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 372 RVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred EEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999987653
No 239
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=97.25 E-value=0.0067 Score=64.99 Aligned_cols=133 Identities=11% Similarity=0.167 Sum_probs=78.8
Q ss_pred CCceEEEEecc-cccccccccc--------ccccCCCcEEEecccc-cCCCc-------c-cc-cccc--eEEecccccc
Q psy8733 272 PEASYLYYCDN-ETVDGVEFNY--------IPDSQGIPLVSDMSSN-FLSRK-------F-DV-SKFG--VIIAGAQKNI 330 (621)
Q Consensus 272 ~~t~~V~~thn-ET~tGv~~p~--------i~~~~g~llvvDavSs-~G~~p-------I-Dv-~~~g--vl~asaqK~l 330 (621)
++++++.++.+ .|.||...+. +++++++++|.|-+-. +.... + .+ +..+ +++.|-=|.+
T Consensus 172 ~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 251 (405)
T 3k7y_A 172 PNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNM 251 (405)
T ss_dssp CSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTS
T ss_pred CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCCcEEEEeeCCccC
Confidence 45677777654 6999999884 3457899999996532 32111 1 11 1123 7788999999
Q ss_pred CCCc--cEEEEE---chhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHH------HHhhCCHHHHHHHH
Q psy8733 331 GPAG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAW------IKRQGGLAKMEQNS 399 (621)
Q Consensus 331 GP~G--lg~liv---r~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~------i~~~gGl~~i~~r~ 399 (621)
|.+| +|.+++ ++++.+++... .... ....+..||.++..++..+|+. ..+. +..+.++.
T Consensus 252 ~l~GlRiG~~~~~~~~~~~~~~~~~~------l~~~--~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~--l~~~~~~~ 321 (405)
T 3k7y_A 252 SLYGERAGALHIVCKNQEEKKIVFNN------LCFI--VRKFYSSPVIHTNRILCQLLNNQNLKLNWIKE--LSQLSQRI 321 (405)
T ss_dssp CCTTTTEEEEEEECSSHHHHHHHHHH------HHHH--HHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHH--HHHHHHHH
T ss_pred CCccccceEEEEEeCCHHHHHHHHHH------HHHH--HhcccCCCcHHHHHHHHHHhCCHHHHHHHHHH--HHHHHHHH
Confidence 9888 577653 45554432110 0000 0122345555555555555532 1122 56777888
Q ss_pred HHHHHHHHHHHH----ccC
Q psy8733 400 LQKSVLLYQEID----NSD 414 (621)
Q Consensus 400 ~~la~~L~e~L~----~~~ 414 (621)
+++.+.+++.|+ +++
T Consensus 322 ~~~R~~l~~~L~~~~~~~g 340 (405)
T 3k7y_A 322 TNNRILFFNKLETYQKKYN 340 (405)
T ss_dssp HHHHHHHHHHHHHHGGGGT
T ss_pred HHHHHHHHHHHHhhhhhcC
Confidence 888999999998 764
No 240
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=96.89 E-value=0.004 Score=67.79 Aligned_cols=118 Identities=14% Similarity=0.157 Sum_probs=77.4
Q ss_pred CceEEEEeccccccccccc----c-----ccccCCCcEEEecccc-cCCCc--ccccc------cceEEeccccc-cCCC
Q psy8733 273 EASYLYYCDNETVDGVEFN----Y-----IPDSQGIPLVSDMSSN-FLSRK--FDVSK------FGVIIAGAQKN-IGPA 333 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p----~-----i~~~~g~llvvDavSs-~G~~p--IDv~~------~gvl~asaqK~-lGP~ 333 (621)
++++|.+.++.+.+|+..| + +++++|+++|+|.+|+ +|... +.++. .|++.+| |. +|
T Consensus 258 ~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~t~s--K~~l~-- 333 (472)
T 1ohv_A 258 TVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVMTFS--KKMMT-- 333 (472)
T ss_dssp CEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEEEEC--GGGSS--
T ss_pred CEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEEEEc--ccccc--
Confidence 6888888777777898766 2 4568999999999998 55432 34444 3456555 98 55
Q ss_pred ccEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 334 GITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 334 Glg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
| |+++ ++++. +..+ ....++++ .|..+.+++.++|+.+.+. + +.++.+++.++|++.|+++
T Consensus 334 G-G~~~-~~~~~----~~~~--------~~~~~T~~-~~~~~~aaa~aal~~~~~~-~---~~~~~~~~~~~l~~~L~~l 394 (472)
T 1ohv_A 334 G-GFFH-KEEFR----PNAP--------YRIFNTWL-GDPSKNLLLAEVINIIKRE-D---LLSNAAHAGKVLLTGLLDL 394 (472)
T ss_dssp E-EEEE-CGGGS----CSSS--------SSSCCSSS-SCHHHHHHHHHHHHHHHHT-T---HHHHHHHHHHHHHHHHHHH
T ss_pred C-CccC-chhhc----cccc--------ccccCccC-ccHHHHHHHHHHHHHHHhC-C---HHHHHHHHHHHHHHHHHHH
Confidence 3 5554 65531 1111 01123332 3455677777999998775 3 5677888888899888775
No 241
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=96.86 E-value=0.0012 Score=69.13 Aligned_cols=159 Identities=10% Similarity=0.033 Sum_probs=115.4
Q ss_pred hhHHHHHhhcccccc-cCCcEEeeecHhHhhhcCCC--CCceeeeeec--------ccCCCccCCCchhHHHHHHHHHHH
Q psy8733 447 FFFGVIIAGAQKNIG-PAGITVVIVREDLLEYALPI--TPTVFHFKIN--------ADNNSVYNTPPTFVVHVIQRVFAW 515 (621)
Q Consensus 447 ~~~~~~~a~~qk~~G-paGl~v~iv~~~~l~~~~~~--~p~~~~y~~~--------~~~~s~~nTP~~~~iy~~~~vl~~ 515 (621)
+..|++++|.||.+| |.|+++++++++++++..+. .+..+++... ....+...|||+..++.+...|++
T Consensus 188 ~~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~ 267 (379)
T 3ke3_A 188 LGIDVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILE 267 (379)
T ss_dssp HTCSEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHH
T ss_pred cCCCEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHH
Confidence 356889999999996 89999999999998765431 2223321110 111223369999999999999999
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHHhccCCcccccCCC---CC--------cccHHHHHHHHHccCccccCCCC------
Q psy8733 516 IKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQA---GF--------PLDELFLKEAKAHNMIQLKGHRL------ 578 (621)
Q Consensus 516 ~~~~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~~v~~---~~--------~~~~~~~~~~~~~~i~~~~g~~~------ 578 (621)
+.+. |++.+.++.+++++.+++.+++.. +- ....+ .. .....+.+.++++||....|+..
T Consensus 268 ~~~~-g~~~~~~~~~~l~~~l~~~l~~~g-~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~Gi~v~~g~~~~~~~~~ 344 (379)
T 3ke3_A 268 AKEI-GFDILRDAQWELGNRVRKVLTDKG-IE-SVAAEGFEAPGVVVSYTERDDMHKGSAFAEAGLQIAAGVPLKVGEPD 344 (379)
T ss_dssp HHHH-CHHHHHHHHHHHHHHHHHHHHHTT-CC-BSBCTTCBCSSEEEEECSCHHHHSSHHHHHTTCCCEECCCCSSCCCT
T ss_pred HHHh-cHHHHHHHHHHHHHHHHHHHHHcC-CE-ecCCccccCceEEEEccCCcchHHHHHHHHCCeEEeCCccccccccC
Confidence 9877 599999999999999999998752 21 11111 10 11112367788999987766531
Q ss_pred -CCccceeeccCCCHHHHHHHHHHHHHHHHH
Q psy8733 579 -VGGIRASIYNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 579 -~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
.+.||++....+|.||++++++.|++..++
T Consensus 345 ~~~~lRis~~~~~t~~di~~~~~~l~~~l~~ 375 (379)
T 3ke3_A 345 NFKTFRLGLFGLDKLTDIDGTVERFEKALDE 375 (379)
T ss_dssp TCCEEEEECCSHHHHTCHHHHHHHHHHHHHH
T ss_pred cCCEEEEeCCcCCCHHHHHHHHHHHHHHHHH
Confidence 466999999899999999999999887664
No 242
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=96.73 E-value=0.0011 Score=68.48 Aligned_cols=158 Identities=19% Similarity=0.209 Sum_probs=120.2
Q ss_pred HHHHHhhcccccc-cCCcEEeeecHhHhhhcCCC-CCc-eeeeeec---ccCCCccCCCchhHHHHHHHHHHHHHhcCCh
Q psy8733 449 FGVIIAGAQKNIG-PAGITVVIVREDLLEYALPI-TPT-VFHFKIN---ADNNSVYNTPPTFVVHVIQRVFAWIKRQGGL 522 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl~v~iv~~~~l~~~~~~-~p~-~~~y~~~---~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~ 522 (621)
.|++..|.+|.+| |.|+++++++++++++..+. .+. .+++... ....++.+||++..++.+...++|+.+.||+
T Consensus 197 ~d~~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~ 276 (376)
T 3f0h_A 197 ADVMITGSQKVLACPPGISVIVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGA 276 (376)
T ss_dssp CSEEEEETTTTTCCCSSCEEEEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHH
T ss_pred ccEEEecCcccccCCCceEEEEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCH
Confidence 4688899999999 99999999999998764331 222 2222221 2235678899999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcccccCCC----------CCcccHHHHHHHHHc-cCccccCCCC--CCccceeeccC
Q psy8733 523 AKMEQNSLQKSVLLYQEIDNSDKFYECPVQA----------GFPLDELFLKEAKAH-NMIQLKGHRL--VGGIRASIYNA 589 (621)
Q Consensus 523 ~~~~~~~~~ka~~lY~~id~~~~~~~~~v~~----------~~~~~~~~~~~~~~~-~i~~~~g~~~--~~~~r~~~~~a 589 (621)
+.+.++.++.++.+++.+++.. + ...... ......+|.+.+.++ ||....|++. .+.||++..+.
T Consensus 277 ~~~~~~~~~~~~~l~~~L~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~ 354 (376)
T 3f0h_A 277 DAEVARIASQAADFRAKIKDLP-F-ELVSESPANGVTSVHPTTANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGA 354 (376)
T ss_dssp HHHHHHHHHHHHHHHHHTTTSS-E-EECCSSBBTTEEEEEESSSCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-C-ccCccccCceEEEEeCCCCCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCC
Confidence 9999999999999999998753 1 111000 111235688888888 9997776643 56799999999
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy8733 590 ITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~ 608 (621)
+|.||++++++.|+++.++
T Consensus 355 ~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 355 LTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp CCHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 9999999999999998764
No 243
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=96.61 E-value=0.086 Score=57.49 Aligned_cols=123 Identities=15% Similarity=0.204 Sum_probs=75.5
Q ss_pred CceEEEEecccccccccccc---------ccccCCCcEEEecccccCC---Ccccccccc----eEEeccccccC-CCcc
Q psy8733 273 EASYLYYCDNETVDGVEFNY---------IPDSQGIPLVSDMSSNFLS---RKFDVSKFG----VIIAGAQKNIG-PAGI 335 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~---------i~~~~g~llvvDavSs~G~---~pIDv~~~g----vl~asaqK~lG-P~Gl 335 (621)
+..+|.+=......|+..|- +++++|+++|+|=+|+=.. .-.-.+.+| +++.| |.+| --=+
T Consensus 226 ~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~a~e~~gv~PDivt~g--K~lggg~P~ 303 (456)
T 4atq_A 226 QVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWFAVDHEGVVPDIITMA--KGIAGGLPL 303 (456)
T ss_dssp GEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEEEEC--GGGGTTSSC
T ss_pred ceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccccccccCCCCchhhhh--hcccCcCCc
Confidence 44555544444445666552 4568999999999998422 223334444 66666 7783 2237
Q ss_pred EEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 336 TVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 336 g~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
|.+..++++.+...+ . ...++|+--|+ +..+..++|+.+.++ ++ .++.+++.+++++.|.++
T Consensus 304 ~av~~~~~i~~~~~~---~--------~~~~Tf~gnpl-a~aaala~L~~i~~~-~l---~~~~~~~g~~l~~~L~~l 365 (456)
T 4atq_A 304 SAITGRADLLDAVHP---G--------GLGGTYGGNPV-ACAAALAAIDTMEQH-DL---NGRARHIEELALGKLREL 365 (456)
T ss_dssp EEEEEEHHHHTTSCT---T--------SSCCSSSSCHH-HHHHHHHHHHHHHHT-TH---HHHHHHHHHHHHHHHHHH
T ss_pred eeeEecHHHHhcccc---c--------CCCCCCCCChH-HHHhhHHHHHHHhhc-cH---HHHHHHHHHHHHHHHHHH
Confidence 889999998765432 1 12456654444 455666789999887 43 445566666676666654
No 244
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=96.01 E-value=0.31 Score=53.31 Aligned_cols=130 Identities=15% Similarity=0.148 Sum_probs=79.6
Q ss_pred CceEEEEecccccccccccc---------ccccCCCcEEEecccccCCC---cccccccc----eEEecccccc--CCCc
Q psy8733 273 EASYLYYCDNETVDGVEFNY---------IPDSQGIPLVSDMSSNFLSR---KFDVSKFG----VIIAGAQKNI--GPAG 334 (621)
Q Consensus 273 ~t~~V~~thnET~tGv~~p~---------i~~~~g~llvvDavSs~G~~---pIDv~~~g----vl~asaqK~l--GP~G 334 (621)
++.+|.+=......|++.|- +++++|+++|+|=+|+=..+ -+-.+.+| +++.+ |.+ |--=
T Consensus 236 ~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t~~--K~l~gG~~P 313 (473)
T 4e3q_A 236 TIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAIISS--KNLTAGFFP 313 (473)
T ss_dssp GEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEEEC--GGGGTTSSC
T ss_pred ceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChHHhc--ccccCCCCC
Confidence 45555554444555777662 45689999999999984322 22223343 66655 888 3234
Q ss_pred cEEEEEchhHHhhhCCCCCceeeccccccCCCccCCchHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHcc
Q psy8733 335 ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS 413 (621)
Q Consensus 335 lg~livr~~ll~~~~~~~P~~ld~~~~~~~~s~~~TP~v~~I~aL~~aL~~i~~~gGl~~i~~r~~~la~~L~e~L~~~ 413 (621)
+|.+.+++++.+.+.+... .+ .....+++|+--| .+..+..++|+.+.++ + +.++.+++.++|++.|+++
T Consensus 314 l~av~~~~~i~~~~~~~~~---~~-~~~~hg~T~~Gnp-la~Aaala~L~~i~~~-~---l~~~~~~~g~~l~~~L~~l 383 (473)
T 4e3q_A 314 MGAVILGPELSKRLETAIE---AI-EEFPHGFTASGHP-VGCAIALKAIDVVMNE-G---LAENVRRLAPRFEERLKHI 383 (473)
T ss_dssp CEEEEECHHHHHHHHHHHH---HH-SCCCCCCTTTTCH-HHHHHHHHHHHHHHHS-S---HHHHHHHHHHHHHHHHHHH
T ss_pred cccccccHHHHHHhccccc---cc-cccccCCCCCCCc-chhhhhhhhhhhhccc-c---HHHHHHHHHHHHHHHHHHH
Confidence 8999999999876532100 00 0012345664434 4455566789999886 4 4456667788888888775
No 245
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=95.71 E-value=0.015 Score=61.04 Aligned_cols=142 Identities=14% Similarity=0.149 Sum_probs=92.6
Q ss_pred HHHhhcccccccCC--cEEeee---cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHH---h-cCC
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK---R-QGG 521 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv---~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~---~-~gg 521 (621)
++..|..|.+|++| ++.+++ ++++++.-.. . .+. ....++++||.++.+++...|+... + ...
T Consensus 251 i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~---~---~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 322 (412)
T 1ajs_A 251 FCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLS---Q---MQK--IVRVTWSNPPAQGARIVARTLSDPELFHEWTGN 322 (412)
T ss_dssp EEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHH---H---HHH--HHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHH
T ss_pred EEEEecccccCCCCcceEEEEEecCCHHHHHHHHH---H---HHH--HHhcccCCCChHHHHHHHHHHcCcchhHHHHHH
Confidence 34567789999999 678888 7875433100 0 011 1335778889999998888887542 0 124
Q ss_pred hHHHHHHHHHHHHHHHHHHhccC---CcccccCCC-C----CcccHH-HHHHHHHccCccccCCCCCCccceeeccCCCH
Q psy8733 522 LAKMEQNSLQKSVLLYQEIDNSD---KFYECPVQA-G----FPLDEL-FLKEAKAHNMIQLKGHRLVGGIRASIYNAITV 592 (621)
Q Consensus 522 ~~~~~~~~~~ka~~lY~~id~~~---~~~~~~v~~-~----~~~~~~-~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~ 592 (621)
++.+.++.+++.+.+++.+++.. ++ ...... + ..+... +.+.++++|+....| +|++ |..++.
T Consensus 323 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~------~Ris-~~~~~~ 394 (412)
T 1ajs_A 323 VKTMADRILSMRSELRARLEALKTPGTW-NHITDQIGMFSFTGLNPKQVEYLINQKHIYLLPS------GRIN-MCGLTT 394 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSSCC-HHHHHCCSSEEECCCCHHHHHHHHHTTCEECCTT------SEEE-GGGCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCe-eEEcCCCceEEEeCCCHHHHHHHHHhCCEEecCC------cEEE-eeeCCH
Confidence 77888899999999999998743 11 111001 1 022344 455667889987643 7987 445699
Q ss_pred HHHHHHHHHHHHHHHH
Q psy8733 593 DEAVILVKFMKEFRHK 608 (621)
Q Consensus 593 ~~~~~l~~~~~~~~~~ 608 (621)
|+++.+++-|+++.++
T Consensus 395 ~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 395 KNLDYVATSIHEAVTK 410 (412)
T ss_dssp TTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999887653
No 246
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=95.58 E-value=0.017 Score=58.93 Aligned_cols=130 Identities=9% Similarity=0.064 Sum_probs=87.6
Q ss_pred HHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
++..|..|.+|++| ++.++.+++++++..+ .. +. .|+|.++.+.+...|+.. ..++.+.++
T Consensus 195 i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~----------~~---~~-~~~~~~~~~~~~~~l~~~---~~~~~~~~~ 257 (335)
T 1uu1_A 195 AVIRTFSKAFSLAAQRVGYVVASEKFIDAYNR----------VR---LP-FNVSYVSQMFAKVALDHR---EIFEERTKF 257 (335)
T ss_dssp EEEEESTTTTTCGGGCCEEEEECHHHHHHHHH----------HS---CT-TCSCHHHHHHHHHHHHTH---HHHHHHHHH
T ss_pred EEEecchhhcCCcccCeEEEEeCHHHHHHHHH----------hc---CC-CCcCHHHHHHHHHHhCCH---HHHHHHHHH
Confidence 44567789999888 6999999998765321 11 12 378889888887777642 247778888
Q ss_pred HHHHHHHHHHHHhccCCcccccCCC-------CCcccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHHHHH
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPVQA-------GFPLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKF 601 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v~~-------~~~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~~~ 601 (621)
.+++.+.+.+.+++. ++...+-.- ......+|.+.+.++||.... ..+.||++. .+.+|++++++-
T Consensus 258 ~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~---~~~~iRis~---~~~~~i~~~~~~ 330 (335)
T 1uu1_A 258 IVEERERMKSALREM-GYRITDSRGNFVFVFMEKEEKERLLEHLRTKNVAVRS---FREGVRITI---GKREENDMILRE 330 (335)
T ss_dssp HHHHHHHHHHHHHHH-TCCBCCCCSSEEEEECCTHHHHHHHHHHHHHTEEEEE---ETTEEEEEC---CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC-CcEEcCCCCeEEEEECCCCCHHHHHHHHHHCCEEEEE---CCCeEEEEe---CCHHHHHHHHHH
Confidence 889999999999875 321111000 001234588888899998665 246699995 246788888887
Q ss_pred HHH
Q psy8733 602 MKE 604 (621)
Q Consensus 602 ~~~ 604 (621)
|++
T Consensus 331 l~~ 333 (335)
T 1uu1_A 331 LEV 333 (335)
T ss_dssp HHC
T ss_pred HHh
Confidence 764
No 247
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=95.47 E-value=0.018 Score=59.34 Aligned_cols=159 Identities=16% Similarity=0.205 Sum_probs=117.0
Q ss_pred hHHHHHhhcccccc-cCCcEEeeecHhHhhhcCCC--CCceeeeeec---cc-CCCccCCCchhHHHHHHHHHHHHHhcC
Q psy8733 448 FFGVIIAGAQKNIG-PAGITVVIVREDLLEYALPI--TPTVFHFKIN---AD-NNSVYNTPPTFVVHVIQRVFAWIKRQG 520 (621)
Q Consensus 448 ~~~~~~a~~qk~~G-paGl~v~iv~~~~l~~~~~~--~p~~~~y~~~---~~-~~s~~nTP~~~~iy~~~~vl~~~~~~g 520 (621)
..|++..|..|.+| |.|+++++++++++++..+. ....+++... .. ......|||.+..+.+...|+++.+.|
T Consensus 198 ~~di~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g 277 (386)
T 2dr1_A 198 GLDVVFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMG 277 (386)
T ss_dssp TCSEEEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhc
Confidence 35788899999998 66999999999998764321 1111122111 11 234456899999999999999998888
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCcccccCCC-------------CCcccHHHHHHHHHccCccccCCCC--CCcccee
Q psy8733 521 GLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQA-------------GFPLDELFLKEAKAHNMIQLKGHRL--VGGIRAS 585 (621)
Q Consensus 521 g~~~~~~~~~~ka~~lY~~id~~~~~~~~~v~~-------------~~~~~~~~~~~~~~~~i~~~~g~~~--~~~~r~~ 585 (621)
|++.+.++.+++++.+++.+++. ++ .....+ ......+|.+.+.++||....|+.. .+.||++
T Consensus 278 ~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~ 355 (386)
T 2dr1_A 278 GKEKWLEMYEKRAKMVREGVREI-GL-DILAEPGHESPTITAVLTPPGIKGDEVYEAMRKRGFELAKGYGSVKEKTFRIG 355 (386)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT-TC-CBSSCTTCBCSSEEEEECCTTCCHHHHHHHHHHTTEECEECCGGGTTTEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHc-CC-eeCcCccccCCceEEEEcCCCCCHHHHHHHHHHCCeEEecCccccCCCEEEEE
Confidence 99999999999999999999875 32 111110 0012456888999999987766643 5679999
Q ss_pred eccCCCHHHHHHHHHHHHHHHHH
Q psy8733 586 IYNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 586 ~~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
.-+.++.|+++.+++.|+++.++
T Consensus 356 ~~~~~~~~~i~~~~~~l~~~~~~ 378 (386)
T 2dr1_A 356 HMGYMKFEDIQEMLDNLREVINE 378 (386)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887654
No 248
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=95.43 E-value=0.034 Score=57.48 Aligned_cols=157 Identities=15% Similarity=0.090 Sum_probs=113.6
Q ss_pred HHHHHhhcccccccCCcEEeeecHhHhhhcCCCCCc--e---------eeeeecccCCCccCCCchhHHHHHHHHHHHHH
Q psy8733 449 FGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPT--V---------FHFKINADNNSVYNTPPTFVVHVIQRVFAWIK 517 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~--~---------~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~ 517 (621)
.|++..|.+|.+||.|+++++++++++++..+.... . ..|.... ....+.||+...+..+...++++.
T Consensus 217 ~d~~~~s~~K~~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~~~ 295 (406)
T 1kmj_A 217 CDFYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAP-WRFEAGTPNTGGIIGLGAALEYVS 295 (406)
T ss_dssp CSEEEEEGGGTTSCTTCEEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTT-GGGCCSSCCHHHHHHHHHHHHHHH
T ss_pred CCEEEEEchhccCCCCcEEEEEeHHHHhhcCCcccCCCceeecccccccccCCCc-hhccCCCCCHHHHHHHHHHHHHHH
Confidence 467778999999999999999999998775433210 0 0011100 122356899999988888999987
Q ss_pred hcCChHHHHHHHHHHHHHHHHHHhccCCcccccCC--CCC-------c-ccHHHHHHHHHccCccccCC----------C
Q psy8733 518 RQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQ--AGF-------P-LDELFLKEAKAHNMIQLKGH----------R 577 (621)
Q Consensus 518 ~~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~~v~--~~~-------~-~~~~~~~~~~~~~i~~~~g~----------~ 577 (621)
+. |++.+.++.+++.+.+++.+++.+++ ..... .+. . -..+|.+.++++||....|. +
T Consensus 296 ~~-~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~g 373 (406)
T 1kmj_A 296 AL-GLNNIAEYEQNLMHYALSQLESVPDL-TLYGPQNRLGVIAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYN 373 (406)
T ss_dssp HH-CHHHHHHHHHHHHHHHHHHHTTSTTE-EEESCTTCCSEEEEEETTCCHHHHHHHHHHTTEECEEECTTCHHHHHHTT
T ss_pred Hc-CHHHHHHHHHHHHHHHHHHHhcCCCe-EEecCCCcCCEEEEEECCCCHHHHHHHHhhCCcEEEeccccchHHHHhcC
Confidence 54 69999999999999999999886543 21111 110 1 23458889999999876653 2
Q ss_pred CCCccceeeccCCCHHHHHHHHHHHHHHHHH
Q psy8733 578 LVGGIRASIYNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 578 ~~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
..+.||++.-..++.||++.|++.|+++.+.
T Consensus 374 ~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 404 (406)
T 1kmj_A 374 VPAMCRASLAMYNTHEEVDRLVTGLQRIHRL 404 (406)
T ss_dssp CSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 3577999999889999999999999987654
No 249
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=95.35 E-value=0.015 Score=59.28 Aligned_cols=157 Identities=18% Similarity=0.193 Sum_probs=114.6
Q ss_pred HHHHHhhccccc-ccCCcEEeeecHhHhhhcCCCC-Cceeeeeecc----c-CCCccCCCchhHHHHHHHHHHHHHhcCC
Q psy8733 449 FGVIIAGAQKNI-GPAGITVVIVREDLLEYALPIT-PTVFHFKINA----D-NNSVYNTPPTFVVHVIQRVFAWIKRQGG 521 (621)
Q Consensus 449 ~~~~~a~~qk~~-GpaGl~v~iv~~~~l~~~~~~~-p~~~~y~~~~----~-~~s~~nTP~~~~iy~~~~vl~~~~~~gg 521 (621)
.|++..|..|.+ ||.|+++++++++++++..+.. +..+++.... . .+....|||.+.++.+...|+++.+.||
T Consensus 184 ~di~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~ 263 (366)
T 1m32_A 184 IDYLISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGG 263 (366)
T ss_dssp CSEEEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccEEEecCcccccCCCceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccC
Confidence 567788899988 6999999999999987654321 1111110000 0 1222458999999999999999988888
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCcccccCC---C---------CC--c-ccHHHHHHHHHccCccccCCC-CCCcccee
Q psy8733 522 LAKMEQNSLQKSVLLYQEIDNSDKFYECPVQ---A---------GF--P-LDELFLKEAKAHNMIQLKGHR-LVGGIRAS 585 (621)
Q Consensus 522 ~~~~~~~~~~ka~~lY~~id~~~~~~~~~v~---~---------~~--~-~~~~~~~~~~~~~i~~~~g~~-~~~~~r~~ 585 (621)
++.+.++.+++++.+++.+++. ++ ..... . .. . ....|.+.+.++||....|+. ..+.||++
T Consensus 264 ~~~~~~~~~~~~~~l~~~L~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~iRi~ 341 (366)
T 1m32_A 264 VAARHQRYQQNQRSLVAGMRAL-GF-NTLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVSQSDCFRIG 341 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TC-CBSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHTTEECEECCCSSSCEEEEE
T ss_pred HhHHHHHHHHHHHHHHHHHHHC-CC-eeccCchhcCceEEEEEcCccCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEe
Confidence 9999999999999999999864 32 11110 0 01 1 235688899999998776654 36779999
Q ss_pred eccCCCHHHHHHHHHHHHHHHH
Q psy8733 586 IYNAITVDEAVILVKFMKEFRH 607 (621)
Q Consensus 586 ~~~a~~~~~~~~l~~~~~~~~~ 607 (621)
.-..++.|+++.+++.|+++.+
T Consensus 342 ~~~~~~~~~i~~~~~~l~~~~~ 363 (366)
T 1m32_A 342 NIGEVYAADITALLTAIRTAMY 363 (366)
T ss_dssp CCSSCCHHHHHHHHHHHHHHCT
T ss_pred cCCCCCHHHHHHHHHHHHHHHH
Confidence 9988999999999999988754
No 250
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=95.33 E-value=0.035 Score=57.18 Aligned_cols=155 Identities=15% Similarity=0.084 Sum_probs=112.7
Q ss_pred HHHHHhhccc-ccccCCcEEeeecHhHhhhcCCCCC-----------ceeeeeecccCCCccCCCchhHHHHHHHHHHHH
Q psy8733 449 FGVIIAGAQK-NIGPAGITVVIVREDLLEYALPITP-----------TVFHFKINADNNSVYNTPPTFVVHVIQRVFAWI 516 (621)
Q Consensus 449 ~~~~~a~~qk-~~GpaGl~v~iv~~~~l~~~~~~~p-----------~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~ 516 (621)
.|++..|.+| .+||.|+++++++++++++..+... .-++|.... ....+.|||...++.+...++++
T Consensus 211 ~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~al~~l 289 (390)
T 1elu_A 211 VDYYAFTGHKWFAGPAGVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGG-KRFEVATSAYPQYAGLLAALQLH 289 (390)
T ss_dssp CSEEEEESSSTTCCCTTCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGG-GGGCCSCCCHHHHHHHHHHHHHH
T ss_pred CCEEEccccccccCCCceEEEEECHHhHhhcCCccccCCcccccccCcccccccch-HhhCCCCCCHHHHHHHHHHHHHH
Confidence 4677788999 6679999999999998876443211 011121111 12245789999999999999999
Q ss_pred HhcCChHHHHHHHHHHHHHHHHHHhccCCcccc-cCC-CC--------Cc-ccHHHHHHHHHccCccccCCCCCCcccee
Q psy8733 517 KRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC-PVQ-AG--------FP-LDELFLKEAKAHNMIQLKGHRLVGGIRAS 585 (621)
Q Consensus 517 ~~~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~-~v~-~~--------~~-~~~~~~~~~~~~~i~~~~g~~~~~~~r~~ 585 (621)
.+.|.++.+.++.+++.+.+++.+++.+++-.. |.. .+ .. ...+|.+.+.++||....|. ..+.||++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~-~~~~iRis 368 (390)
T 1elu_A 290 QRQGTAEERYQAICQRSEFLWRGLNQLPHVHCLATSAPQAGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA-DPDCIRAC 368 (390)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHSTTEEESCSSCCSSSEEEEEECSSSCHHHHHHHHHHTTEECEEET-TTTEEEEE
T ss_pred HHcCCHHHHHHHHHHHHHHHHHHHHhcCCcEEecCccccccEEEEEcCCCCCHHHHHHHHHHCCEEEEecC-CCCeEEEe
Confidence 888889999999999999999999876443111 100 10 11 23568888999999977765 34679999
Q ss_pred eccCCCHHHHHHHHHHHHHH
Q psy8733 586 IYNAITVDEAVILVKFMKEF 605 (621)
Q Consensus 586 ~~~a~~~~~~~~l~~~~~~~ 605 (621)
.-..++.|+++.+++.|+++
T Consensus 369 ~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 369 CHYITDEEEINHLLARLADF 388 (390)
T ss_dssp CCTTCCHHHHHHHHHHHTTC
T ss_pred cccCCCHHHHHHHHHHHHhh
Confidence 87789999999999988754
No 251
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=95.33 E-value=0.023 Score=59.69 Aligned_cols=136 Identities=14% Similarity=0.156 Sum_probs=87.8
Q ss_pred HhhcccccccCCc--EEee--e-----cHh----HhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHH--
Q psy8733 453 IAGAQKNIGPAGI--TVVI--V-----RED----LLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK-- 517 (621)
Q Consensus 453 ~a~~qk~~GpaGl--~v~i--v-----~~~----~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~-- 517 (621)
..|..|.+||+|+ +.++ . +++ +++.. +.. ...++.+||.+..+++...|+...
T Consensus 249 ~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l----------~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~ 316 (412)
T 1yaa_A 249 CQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQL----------AKI--IRSEVSNPPAYGAKIVAKLLETPELT 316 (412)
T ss_dssp EEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHH----------HHH--HHTTTSSCCHHHHHHHHHHHHSHHHH
T ss_pred EeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHH----------HHH--HhhccCCCChHHHHHHHHHhCCHHHH
Confidence 4566899999995 6665 5 555 44431 111 234577889999988887776442
Q ss_pred h--cCChHHHHHHHHHHHHHHHHHHhccC---CcccccCCCC----CcccH-HHHHHHHHccCccccCCCCCCccceeec
Q psy8733 518 R--QGGLAKMEQNSLQKSVLLYQEIDNSD---KFYECPVQAG----FPLDE-LFLKEAKAHNMIQLKGHRLVGGIRASIY 587 (621)
Q Consensus 518 ~--~gg~~~~~~~~~~ka~~lY~~id~~~---~~~~~~v~~~----~~~~~-~~~~~~~~~~i~~~~g~~~~~~~r~~~~ 587 (621)
+ ...++.+.++.+++.+.+++.+++.. ++-..+-+.+ ..++. .+.+.++++||.... .+|++.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~------~~Ris~- 389 (412)
T 1yaa_A 317 EQWHKDMVTMSSRITKMRHALRDHLVKLGTPGNWDHIVNQCGMFSFTGLTPQMVKRLEETHAVYLVA------SGRASI- 389 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCT------TSEEEG-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCeeeeccCceEEEeeCCCHHHHHHHHHhCCEEecc------CcEEEE-
Confidence 0 12578888999999999999998643 1100000000 01223 355556678988654 589984
Q ss_pred cCCCHHHHHHHHHHHHHHHH
Q psy8733 588 NAITVDEAVILVKFMKEFRH 607 (621)
Q Consensus 588 ~a~~~~~~~~l~~~~~~~~~ 607 (621)
..++.|+++.+++-|+++.+
T Consensus 390 ~~~~~~~i~~~~~~l~~~~~ 409 (412)
T 1yaa_A 390 AGLNQGNVEYVAKAIDEVVR 409 (412)
T ss_dssp GGCCTTTHHHHHHHHHHHHH
T ss_pred ccCCHhHHHHHHHHHHHHHH
Confidence 45699999999999988765
No 252
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=95.32 E-value=0.028 Score=58.21 Aligned_cols=159 Identities=15% Similarity=0.100 Sum_probs=113.5
Q ss_pred HHHHHhhccccc-ccCCcEEeeecHhHhhhcCCC----CCceee-------eeecccCCCccCCCchhHHHHHHHHHHHH
Q psy8733 449 FGVIIAGAQKNI-GPAGITVVIVREDLLEYALPI----TPTVFH-------FKINADNNSVYNTPPTFVVHVIQRVFAWI 516 (621)
Q Consensus 449 ~~~~~a~~qk~~-GpaGl~v~iv~~~~l~~~~~~----~p~~~~-------y~~~~~~~s~~nTP~~~~iy~~~~vl~~~ 516 (621)
.|++..|.+|.+ ||+|+++++++++++++..+. .|.+++ |.........+.|||+..+..+...++|+
T Consensus 197 ~d~~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~ 276 (393)
T 2huf_A 197 IDAMYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMA 276 (393)
T ss_dssp CSEEECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHH
T ss_pred ccEEEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHH
Confidence 577888999986 599999999999998764432 232222 11111234567899999999999999998
Q ss_pred HhcCChHHHHHHHHHHHHHHHHHHhccCCc--cc-----------ccCCCCCcccHHHHHHHHH-ccCccccCCC--CCC
Q psy8733 517 KRQGGLAKMEQNSLQKSVLLYQEIDNSDKF--YE-----------CPVQAGFPLDELFLKEAKA-HNMIQLKGHR--LVG 580 (621)
Q Consensus 517 ~~~gg~~~~~~~~~~ka~~lY~~id~~~~~--~~-----------~~v~~~~~~~~~~~~~~~~-~~i~~~~g~~--~~~ 580 (621)
.+. |++.+.++.+++.+.+++.|++. ++ +. ..+..+ ....+|.+.+.+ +||....|.. ..+
T Consensus 277 ~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~~gi~v~~g~~~~~~~ 353 (393)
T 2huf_A 277 CEE-GLPALIARHEDCAKRLYRGLQDA-GFELYADPKDRLSTVTTIKVPQG-VDWLKAAQYAMKTYLVEISGGLGPTAGQ 353 (393)
T ss_dssp HHH-CHHHHHHHHHHHHHHHHHHHHHT-TCCBSSCGGGBCTTEEEEECCTT-CCHHHHHHHHHHHHCEECBCCCGGGTTT
T ss_pred HHh-CHHHHHHHHHHHHHHHHHHHHHc-CCeeccCccccCCcEEEEEcCCC-CCHHHHHHHHHHhCCEEEecCcccccCC
Confidence 755 59999999999999999999864 22 11 111100 123457777765 5998776653 367
Q ss_pred ccceee-ccCCCHHHHHHHHHHHHHHHHHcC
Q psy8733 581 GIRASI-YNAITVDEAVILVKFMKEFRHKHS 610 (621)
Q Consensus 581 ~~r~~~-~~a~~~~~~~~l~~~~~~~~~~~~ 610 (621)
.||++. ...++.|+++.+++.|+++.++..
T Consensus 354 ~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~~~ 384 (393)
T 2huf_A 354 VFRIGLMGQNATTERVDRVLQVFQEAVAAVK 384 (393)
T ss_dssp EEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEcccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 799999 556789999999999999877643
No 253
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=94.80 E-value=0.067 Score=55.62 Aligned_cols=159 Identities=16% Similarity=0.185 Sum_probs=114.9
Q ss_pred HHHHHhhcccccccCCcEEeeecHhHhhhcCCCCCc----------eeeeeecccCCCccCCCchhHHHHHHHHHHHHHh
Q psy8733 449 FGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPT----------VFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKR 518 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~----------~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~ 518 (621)
.|++..|.+|.+||.|+++++++++++++..+.... ...|.. ....-.+.||+...+..+...++++.+
T Consensus 222 ~di~~~s~sK~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~al~~~~~ 300 (420)
T 1t3i_A 222 CDWLVASGHKMCAPTGIGFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGE-LPHKFEAGTPAIAEAIALGAAVDYLTD 300 (420)
T ss_dssp CSEEEEEGGGTTSCTTCEEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECC-TTGGGCCSSCCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEehhhhcCCCceEEEEEchHHHhhcCceecCCCccccccccccCCCC-chhhccCCCccHHHHHHHHHHHHHHHH
Confidence 467888999988999999999999998775432211 001111 001112568999888888888998875
Q ss_pred cCChHHHHHHHHHHHHHHHHHHhccCCcccc-cCC----CC--------CcccHHHHHHHHHccCccccCC---------
Q psy8733 519 QGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC-PVQ----AG--------FPLDELFLKEAKAHNMIQLKGH--------- 576 (621)
Q Consensus 519 ~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~-~v~----~~--------~~~~~~~~~~~~~~~i~~~~g~--------- 576 (621)
. |++.+.++.+++++.+++.+++.+++-.. +.. .+ ..-..+|.+.++++||....|+
T Consensus 301 ~-~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~ 379 (420)
T 1t3i_A 301 L-GMENIHNYEVELTHYLWQGLGQIPQLRLYGPNPKHGDRAALASFNVAGLHASDVATMVDQDGIAIRSGHHCTQPLHRL 379 (420)
T ss_dssp H-CHHHHHHHHHHHHHHHHHHHHTCTTEEEESCCGGGSCBCSEEEEEETTBCHHHHHHHHHTTTEECBCSCTTCHHHHHH
T ss_pred h-HHHHHHHHHHHHHHHHHHHHHhCCCeEEeCCCccccccCCEEEEEECCCCHHHHHHHHHHCCeEEeeccccchHHHHh
Confidence 4 79999999999999999999886543211 110 11 0123458889999999987763
Q ss_pred -CCCCccceeeccCCCHHHHHHHHHHHHHHHHHc
Q psy8733 577 -RLVGGIRASIYNAITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 577 -~~~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~~ 609 (621)
+..+.||++.-..++.|+++.+++.|+++.++.
T Consensus 380 ~g~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~ 413 (420)
T 1t3i_A 380 FDASGSARASLYFYNTKEEIDLFLQSLQATIRFF 413 (420)
T ss_dssp TTCCCCEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 335679999998899999999999999987754
No 254
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=94.61 E-value=0.018 Score=59.79 Aligned_cols=138 Identities=16% Similarity=0.224 Sum_probs=85.0
Q ss_pred HhhcccccccCC--cEEeee---cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHH--Hh--cCChH
Q psy8733 453 IAGAQKNIGPAG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWI--KR--QGGLA 523 (621)
Q Consensus 453 ~a~~qk~~GpaG--l~v~iv---~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~--~~--~gg~~ 523 (621)
..|..|.+|++| ++.+++ +++.++.... . .+. ...+++.+||.++.+++...|+.. ++ ...++
T Consensus 241 ~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~---~---~~~--~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~ 312 (396)
T 2q7w_A 241 ASSYSXNFGLYNERVGACTLVAADSETVDRAFS---Q---MKA--AIRANYSNPPAHGASVVATILSNDALRAIWEQELT 312 (396)
T ss_dssp EEECTTTTTCGGGCCEEEEEECSSHHHHHHHHH---H---HHH--HHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred EEeccccccccccccceEEEEcCCHHHHHHHHH---H---HHH--HHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHH
Confidence 456789999999 477776 6644332100 0 011 123567888999988887777532 10 12467
Q ss_pred HHHHHHHHHHHHHHHHHhccC---CcccccCCCC----Cccc-HHHHHHHHHccCccccCCCCCCccceeeccCCCHHHH
Q psy8733 524 KMEQNSLQKSVLLYQEIDNSD---KFYECPVQAG----FPLD-ELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEA 595 (621)
Q Consensus 524 ~~~~~~~~ka~~lY~~id~~~---~~~~~~v~~~----~~~~-~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~ 595 (621)
.+.++.+++.+.+++.+++.. ++-..+-+.+ .++. ..+.+.++++|+.... ++|++. ..++.|++
T Consensus 313 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~------~~Ris~-~~~~~e~i 385 (396)
T 2q7w_A 313 DMRQRIQRMRQLFVNTLQEKGANRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVA------SGRVNV-AGMTPDNM 385 (396)
T ss_dssp HC-CHHHHHHHHHHHHHHHTTCCSCCTHHHHCCSSEEECCCCHHHHHHHHHHHCEECCT------TCEEEG-GGCCTTTH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcceecCCCceEEEecCCHHHHHHHHHhcCeeecC------CceEEE-eecCHHHH
Confidence 777888889999999988653 1110000101 1222 3456677788998765 379874 45699999
Q ss_pred HHHHHHHHHH
Q psy8733 596 VILVKFMKEF 605 (621)
Q Consensus 596 ~~l~~~~~~~ 605 (621)
+.+++.|++.
T Consensus 386 ~~~~~~l~~~ 395 (396)
T 2q7w_A 386 APLCEAIVAV 395 (396)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999888753
No 255
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=94.26 E-value=0.062 Score=54.25 Aligned_cols=156 Identities=12% Similarity=0.120 Sum_probs=111.3
Q ss_pred HHHHHhhccccc-ccCCcEEeeecHhHhhhcCCCCCce-eee---eecccCCCccCCCchhHHHHHHHHHHHHHhcCChH
Q psy8733 449 FGVIIAGAQKNI-GPAGITVVIVREDLLEYALPITPTV-FHF---KINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLA 523 (621)
Q Consensus 449 ~~~~~a~~qk~~-GpaGl~v~iv~~~~l~~~~~~~p~~-~~y---~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~ 523 (621)
.|++..|.+|.+ ||.|+++++++++++++... .|.. ++. ...........|||...++.+...++++.+. |++
T Consensus 177 ~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~ 254 (353)
T 2yrr_A 177 VDYAFTGSQKCLSAPPGLAPIAASLEARKAFTG-KRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEE-GVA 254 (353)
T ss_dssp CSEEECCTTSTTCCCSSCEEEEECHHHHHHCCC-CSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHH-CHH
T ss_pred ceEEEecCcccccCCCceEEEEECHHHHHHhcc-CCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHh-hHH
Confidence 367788889966 58999999999999876532 2211 110 0111123445699999999999999998765 599
Q ss_pred HHHHHHHHHHHHHHHHHhccCCcccc-cCC-C--------CCc-ccHHHHHHHHHccCccccCC--CCCCccceeeccCC
Q psy8733 524 KMEQNSLQKSVLLYQEIDNSDKFYEC-PVQ-A--------GFP-LDELFLKEAKAHNMIQLKGH--RLVGGIRASIYNAI 590 (621)
Q Consensus 524 ~~~~~~~~ka~~lY~~id~~~~~~~~-~v~-~--------~~~-~~~~~~~~~~~~~i~~~~g~--~~~~~~r~~~~~a~ 590 (621)
.+.++.+++++.+++.+++. ++-.. +.. . ... -..+|.+.+.++||....|+ ...+.+|++..+.+
T Consensus 255 ~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRi~~~~~~ 333 (353)
T 2yrr_A 255 ARERRAREVYAWVLEELKAR-GFRPYPKASPLPTVLVVRPPEGVDADRLVRALYAEGVAVAGGIGPTRGQVLRLGLMGEG 333 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCEESCSSSBCTTEEEEECCTTCCHHHHHHHHHHTTEECEECCGGGTTTCEEEECSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCccccCccCCCeEEEEECCCCCCHHHHHHHHHHCCEEEeCCccccCCCeEEEecCccC
Confidence 99999999999999999864 32111 100 0 011 23568889999999877665 33677999999999
Q ss_pred CHHHHH-HHHHHHHHHHH
Q psy8733 591 TVDEAV-ILVKFMKEFRH 607 (621)
Q Consensus 591 ~~~~~~-~l~~~~~~~~~ 607 (621)
+.+|++ .+++.|+++.+
T Consensus 334 ~~~~~~~~~~~~l~~~l~ 351 (353)
T 2yrr_A 334 ARREAYQAFLKALDRALA 351 (353)
T ss_dssp SCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999 99999988754
No 256
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=94.19 E-value=0.029 Score=57.72 Aligned_cols=155 Identities=15% Similarity=0.188 Sum_probs=110.1
Q ss_pred HHHHHhhcccccc-cCCcEEeeecHhHhh-hcCC-----C---C-------CceeeeeecccCCCccCCCchhHHHHHHH
Q psy8733 449 FGVIIAGAQKNIG-PAGITVVIVREDLLE-YALP-----I---T-------PTVFHFKINADNNSVYNTPPTFVVHVIQR 511 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl~v~iv~~~~l~-~~~~-----~---~-------p~~~~y~~~~~~~s~~nTP~~~~iy~~~~ 511 (621)
.|++..|.+|.++ |.|++++++++++++ +..+ . . |.+..|+ ...+.++.|||++.++.+..
T Consensus 192 ~d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~ 269 (385)
T 2bkw_A 192 VDFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYE--AGKGAYFATPPVQLINSLDV 269 (385)
T ss_dssp CSEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHH--TTCCCCSSCCCHHHHHHHHH
T ss_pred ceEEEecCccccccCCcceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhh--ccCCCCCCCCCHHHHHHHHH
Confidence 4677889999885 999999999999887 4210 0 0 0000111 12344567999999999999
Q ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHH-hccCCcccccCC----C-CC----cc--cHHHHHHHHHccCccccCCCC-
Q psy8733 512 VFAWIKRQGGLAKMEQNSLQKSVLLYQEI-DNSDKFYECPVQ----A-GF----PL--DELFLKEAKAHNMIQLKGHRL- 578 (621)
Q Consensus 512 vl~~~~~~gg~~~~~~~~~~ka~~lY~~i-d~~~~~~~~~v~----~-~~----~~--~~~~~~~~~~~~i~~~~g~~~- 578 (621)
.|+++.+. |++.+.++.+++++.+++.| ++. ++-..+.+ . .. .+ ..+|.+.+.++||....|+..
T Consensus 270 al~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~ 347 (385)
T 2bkw_A 270 ALKEILEE-GLHKRWDLHREMSDWFKDSLVNGL-QLTSVSRYPSNMSAHGLTAVYVADPPDVIAFLKSHGVVIAGGIHKD 347 (385)
T ss_dssp HHHHHHHH-CHHHHHHHHHHHHHHHHHHHHTTT-CCEESSCSSSTTBCSSCEEEECSCHHHHHHHHHHTTEECBCCCCTT
T ss_pred HHHHHHHc-cHHHHHHHHHHHHHHHHHHHHHhc-CceecccCcccccCCceEEEecCCHHHHHHHHHHCCeEEeCCCCcc
Confidence 99998765 69999999999999999999 764 33111101 0 10 11 456888899999998777642
Q ss_pred --CCccceeecc----CCCHHHHHHHHHHHHHHHH
Q psy8733 579 --VGGIRASIYN----AITVDEAVILVKFMKEFRH 607 (621)
Q Consensus 579 --~~~~r~~~~~----a~~~~~~~~l~~~~~~~~~ 607 (621)
.+.+|++.|+ .++.||++.+++.|+++.+
T Consensus 348 ~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~ 382 (385)
T 2bkw_A 348 IGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQ 382 (385)
T ss_dssp TGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTT
T ss_pred cCCCEEEEEccccccccCCHHHHHHHHHHHHHHHH
Confidence 4569999655 5799999999999988743
No 257
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=94.18 E-value=0.079 Score=54.80 Aligned_cols=159 Identities=16% Similarity=0.183 Sum_probs=111.8
Q ss_pred HHHHHhhcccccc-cCCcEEeeecHhHhhhcCC----CCCceee-------eeecccCCCccCCCchhHHHHHHHHHHHH
Q psy8733 449 FGVIIAGAQKNIG-PAGITVVIVREDLLEYALP----ITPTVFH-------FKINADNNSVYNTPPTFVVHVIQRVFAWI 516 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl~v~iv~~~~l~~~~~----~~p~~~~-------y~~~~~~~s~~nTP~~~~iy~~~~vl~~~ 516 (621)
.|+++.|.+|.++ |.|++++++++++++.... .-+.+++ |.........+.|||...++.+...|+++
T Consensus 196 ~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~ 275 (396)
T 2ch1_A 196 IDAVYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQI 275 (396)
T ss_dssp CCEEECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHH
T ss_pred cCEEEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHH
Confidence 3677889999886 8899999999998876422 1122221 11001124567899999999999999997
Q ss_pred HhcCChHHHHHHHHHHHHHHHHHHhccCCc--ccc------------cCCCCCcccHHHHHHHHH-ccCccccCCC--CC
Q psy8733 517 KRQGGLAKMEQNSLQKSVLLYQEIDNSDKF--YEC------------PVQAGFPLDELFLKEAKA-HNMIQLKGHR--LV 579 (621)
Q Consensus 517 ~~~gg~~~~~~~~~~ka~~lY~~id~~~~~--~~~------------~v~~~~~~~~~~~~~~~~-~~i~~~~g~~--~~ 579 (621)
.+. +++.+.++.+++++.+++.+++. ++ +.. .+.++ ....+|.+.+.+ +||....|+. ..
T Consensus 276 ~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~~gi~v~~g~~~~~~ 352 (396)
T 2ch1_A 276 AEE-GLENQIKRRIECAQILYEGLGKM-GLDIFVKDPRHRLPTVTGIMIPKG-VDWWKVSQYAMNNFSLEVQGGLGPTFG 352 (396)
T ss_dssp HHH-CHHHHHHHHHHHHHHHHHHHHHH-TCCBSSCSGGGBCTTEEEEECCTT-CCHHHHHHHHHHHHCBCCBCCCGGGTT
T ss_pred HHh-hHHHHHHHHHHHHHHHHHHHHHC-CCeeccCCccccCCceEEEEcCCC-CCHHHHHHHHHHhCCEEEecCccccCC
Confidence 654 69999999999999999999875 32 110 01001 123457777766 4999877764 35
Q ss_pred Cccceee-ccCCCHHHHHHHHHHHHHHHHHcC
Q psy8733 580 GGIRASI-YNAITVDEAVILVKFMKEFRHKHS 610 (621)
Q Consensus 580 ~~~r~~~-~~a~~~~~~~~l~~~~~~~~~~~~ 610 (621)
+.||++. ...++.|+++.+++.|+++.++..
T Consensus 353 ~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~ 384 (396)
T 2ch1_A 353 KAWRVGIMGECSTVQKIQFYLYGFKESLKATH 384 (396)
T ss_dssp TEEEEECCGGGCSHHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCcCCHHHHHHHHHHHHHHHHHhC
Confidence 6799999 457899999999999999887654
No 258
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=94.11 E-value=0.084 Score=54.53 Aligned_cols=160 Identities=11% Similarity=0.084 Sum_probs=115.0
Q ss_pred HHHHHhhccccc-ccCCcEEeeecHhHhhhcCCCC--C--ceeeeeecc----cCCCccCCCchhHHHHHHHHHHHHHhc
Q psy8733 449 FGVIIAGAQKNI-GPAGITVVIVREDLLEYALPIT--P--TVFHFKINA----DNNSVYNTPPTFVVHVIQRVFAWIKRQ 519 (621)
Q Consensus 449 ~~~~~a~~qk~~-GpaGl~v~iv~~~~l~~~~~~~--p--~~~~y~~~~----~~~s~~nTP~~~~iy~~~~vl~~~~~~ 519 (621)
.|++..|.+|.+ ||.|+++++++++++++..+.. | ..+++.... .......|||...++.+...++++.+.
T Consensus 187 ~d~~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 266 (392)
T 2z9v_A 187 ADIYVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNE 266 (392)
T ss_dssp CSEEEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecCcccccCCCceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 467888999976 5899999999999987543211 1 222222111 123456799999999999999998766
Q ss_pred CChHHHHHHHHHHHHHHHHHHhccCCcccccC-C----CC--------Cc-ccHHHHHHHHHc-cCccccCC--CCCCcc
Q psy8733 520 GGLAKMEQNSLQKSVLLYQEIDNSDKFYECPV-Q----AG--------FP-LDELFLKEAKAH-NMIQLKGH--RLVGGI 582 (621)
Q Consensus 520 gg~~~~~~~~~~ka~~lY~~id~~~~~~~~~v-~----~~--------~~-~~~~~~~~~~~~-~i~~~~g~--~~~~~~ 582 (621)
|++.+.++.+++++.+++.|++. ++ .... . .. .. ...+|.+.+.++ ||....|+ ...+.|
T Consensus 267 -g~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~~~~~~l 343 (392)
T 2z9v_A 267 -GPEAVWARHALTAKAMRAGVTAM-GL-SVWAASDSIASPTTTAVRTPDGVDEKALRQAARARYGVVFSSGRGETLGKLT 343 (392)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHT-TC-CBSSSSGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEE
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHc-CC-eeccCCccccCCceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCCCCCCeE
Confidence 49999999999999999999864 32 1110 1 00 01 235588888887 99977665 336779
Q ss_pred ceeecc-CCCHHHHHHHHHHHHHHHHHcCC
Q psy8733 583 RASIYN-AITVDEAVILVKFMKEFRHKHSR 611 (621)
Q Consensus 583 r~~~~~-a~~~~~~~~l~~~~~~~~~~~~~ 611 (621)
|++.++ .++.|+++.+++.|+++.++.+.
T Consensus 344 Ri~~~~~~~~~~~i~~~~~~l~~~~~~~~~ 373 (392)
T 2z9v_A 344 RIGHMGPTAQPIYAIAALTALGGAMNAAGR 373 (392)
T ss_dssp EEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred EEeCcccccCHHHHHHHHHHHHHHHHHcCC
Confidence 999877 99999999999999998876653
No 259
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=94.08 E-value=0.052 Score=55.63 Aligned_cols=161 Identities=14% Similarity=0.188 Sum_probs=117.2
Q ss_pred hHHHHHhhcccccc-cCCcEEeeecHhHhhhc-CCCC--Cceee---eeecccC----CCcc-CCCchhHHHHHHHHHHH
Q psy8733 448 FFGVIIAGAQKNIG-PAGITVVIVREDLLEYA-LPIT--PTVFH---FKINADN----NSVY-NTPPTFVVHVIQRVFAW 515 (621)
Q Consensus 448 ~~~~~~a~~qk~~G-paGl~v~iv~~~~l~~~-~~~~--p~~~~---y~~~~~~----~s~~-nTP~~~~iy~~~~vl~~ 515 (621)
..|++..|.+|.+| |.|+++++++++++++. .+.. +..++ +...... .+++ .|||+..++.+...+++
T Consensus 179 ~~d~~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~ 258 (384)
T 3zrp_A 179 NVDVYLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRL 258 (384)
T ss_dssp TCSEEEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHH
T ss_pred CCCEEEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHH
Confidence 35778889999995 99999999999998764 2211 11111 1111111 3334 49999999999999998
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHHhccCCcccccCC-----C-------CCcccHHHHHHHHHccCccccCC-CCCCcc
Q psy8733 516 IKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQ-----A-------GFPLDELFLKEAKAHNMIQLKGH-RLVGGI 582 (621)
Q Consensus 516 ~~~~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~~v~-----~-------~~~~~~~~~~~~~~~~i~~~~g~-~~~~~~ 582 (621)
+.+. |++.+.++.+++++.+++.|.+. ++-..+.+ . ......+|.+.+.++||....|+ ...+.|
T Consensus 259 ~~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~i 336 (384)
T 3zrp_A 259 IEKE-GIENRIKRHTMVASAIRAGLEAL-GLEIVARRPESYSNTVTGVILKVADPQKVLAGTVNEGVEFAPGVHPAFKYF 336 (384)
T ss_dssp HHHH-CHHHHHHHHHHHHHHHHHHHHHT-TCCBSCSSGGGBCSSEEEEECSSSCHHHHHHHHHTTTCCCEECCCTTCCEE
T ss_pred HHhc-CHHHHHHHHHHHHHHHHHHHHHC-CCeEccCcccccCccEEEEECCCCCHHHHHHHHHHCCEEEecCCCCCcCEE
Confidence 8765 59999999999999999999876 32111111 0 01134568899999999977766 444779
Q ss_pred ceeeccCCCHHHHHHHHHHHHHHHHHcC
Q psy8733 583 RASIYNAITVDEAVILVKFMKEFRHKHS 610 (621)
Q Consensus 583 r~~~~~a~~~~~~~~l~~~~~~~~~~~~ 610 (621)
|++.+..++.|+++.+++.|+++.++..
T Consensus 337 Ri~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 337 RIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp EEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred EEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999887764
No 260
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=93.91 E-value=0.083 Score=55.26 Aligned_cols=157 Identities=15% Similarity=0.104 Sum_probs=111.6
Q ss_pred HHHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 449 FGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
.|++..|.+|.+||.|++++++++++++...+.. .. .. ........|||.+.++.+...++++.+. ++.+.++
T Consensus 216 ~di~~~s~sK~~g~~g~G~~~~~~~~~~~~~~~~---~~-~~-~~~~~~~~~~~~~~~~a~~~al~~~~~~--~~~~~~~ 288 (423)
T 3lvm_A 216 VDLMSFSGHKIYGPKGIGALYVRRKPRVRIEAQM---HG-GG-HERGMRSGTLPVHQIVGMGEAYRIAKEE--MATEMER 288 (423)
T ss_dssp CSEEEEESTTTTSCSSCEEEEECBTTBCCCCCSS---CS-SC-TTTTTCCSCCCHHHHHHHHHHHHHHHHH--HHHHHHH
T ss_pred CCEEEechHHhcCCCCeEEEEEeccccCCCCccc---cC-Cc-ccccccCCCCCHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence 5788889999999999999999998876533211 10 00 1223457799999999999999988764 8899999
Q ss_pred HHHHHHHHHHHHhccCCcccccCCC----C------Cc-ccHHHHHHHHHccCccccCCC--C-----------------
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPVQA----G------FP-LDELFLKEAKAHNMIQLKGHR--L----------------- 578 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v~~----~------~~-~~~~~~~~~~~~~i~~~~g~~--~----------------- 578 (621)
.+++.+.+++.|++.+++-...... . .. -...+.+.+++ +....|.. .
T Consensus 289 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~ 366 (423)
T 3lvm_A 289 LRGLRNRLWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKD--LAVSSGSACTSASLEPSYVLRALGLNDE 366 (423)
T ss_dssp HHHHHHHHHHHHTTSTTEEEESCSTTBCTTEEEEEETTSCHHHHHHHTTT--EECBCCCC-----CCCCHHHHHHTCCHH
T ss_pred HHHHHHHHHHHHhcCCCEEEeCCccccCCCeEEEEeCCCCHHHHHHHHhh--heeccCccccCCCccccHHHHHhCCCcc
Confidence 9999999999998776532211110 0 01 23446666655 44444421 1
Q ss_pred --CCccceeeccCCCHHHHHHHHHHHHHHHHHcCCCCc
Q psy8733 579 --VGGIRASIYNAITVDEAVILVKFMKEFRHKHSRLSA 614 (621)
Q Consensus 579 --~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~~ 614 (621)
.+.||++..+.++.||++.+++.|+++.++..+.++
T Consensus 367 ~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~~~~ 404 (423)
T 3lvm_A 367 LAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSP 404 (423)
T ss_dssp HHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHTSSH
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHHHHhhccCc
Confidence 367999999999999999999999999887766654
No 261
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=93.74 E-value=0.063 Score=57.39 Aligned_cols=144 Identities=15% Similarity=0.145 Sum_probs=97.4
Q ss_pred HHHHHhhcccccccCC--cEEeee-cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHH
Q psy8733 449 FGVIIAGAQKNIGPAG--ITVVIV-REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKM 525 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaG--l~v~iv-~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~ 525 (621)
.+++..|..|.+|++| ++.++. ++++++... . .....++ ++|.+..+.+...|+.....+.++.+
T Consensus 265 ~~i~i~S~sK~~~~~G~riG~~~~~~~~l~~~l~----------~-~~~~~~~-~~~~~~~~a~~~aL~~~~~~~~~~~~ 332 (447)
T 3b46_A 265 LTLTVGSAGKSFAATGWRIGWVLSLNAELLSYAA----------K-AHTRICF-ASPSPLQEACANSINDALKIGYFEKM 332 (447)
T ss_dssp TEEEEEEHHHHTTCTTSCCEEEECSCHHHHHHHH----------H-HHHHHTS-SCCHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred cEEEEecCchhcCCcchhhEEEEeCCHHHHHHHH----------H-HHhhccC-CCChHHHHHHHHHHhCCcchHHHHHH
Confidence 4566788899999888 899999 888876531 1 1112233 45677788888888776556678899
Q ss_pred HHHHHHHHHHHHHHHhccC--------Ccccc-cCCCC--------------CcccHHHHHHH-HHccCccccC--CCC-
Q psy8733 526 EQNSLQKSVLLYQEIDNSD--------KFYEC-PVQAG--------------FPLDELFLKEA-KAHNMIQLKG--HRL- 578 (621)
Q Consensus 526 ~~~~~~ka~~lY~~id~~~--------~~~~~-~v~~~--------------~~~~~~~~~~~-~~~~i~~~~g--~~~- 578 (621)
.++.+++.+.+.+.+++.. +||.. .+.+. .....+|.+.+ +++|+....| |..
T Consensus 333 ~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~ 412 (447)
T 3b46_A 333 RQEYINKFKIFTSIFDELGLPYTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIK 412 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCG
T ss_pred HHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCC
Confidence 9999999999999998641 23221 11110 01233577666 4689986544 322
Q ss_pred ------CCccceeeccCCCHHHHHHHHHHHHHHH
Q psy8733 579 ------VGGIRASIYNAITVDEAVILVKFMKEFR 606 (621)
Q Consensus 579 ------~~~~r~~~~~a~~~~~~~~l~~~~~~~~ 606 (621)
.+.||++.- .+.|+++..++-|+++.
T Consensus 413 ~~~~~~~~~iRls~~--~~~e~l~~~~~~l~~~~ 444 (447)
T 3b46_A 413 EHEKAAENLLRFAVC--KDDAYLENAVERLKLLK 444 (447)
T ss_dssp GGGGGGTTEEEEECC--SCHHHHHHHHHHGGGGG
T ss_pred CccCCCCCEEEEEEe--CCHHHHHHHHHHHHHHH
Confidence 466999864 58999999888887753
No 262
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=93.67 E-value=0.048 Score=57.32 Aligned_cols=142 Identities=10% Similarity=0.036 Sum_probs=92.5
Q ss_pred HHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 450 GVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 450 ~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
+++..|..|.+|++| ++.++.+++++++..+ + . ..+..++|.+..+.+...|+.. ...++.+.+
T Consensus 245 ~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~-------~----~-~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~ 310 (404)
T 2o1b_A 245 AIEIYSLSKGYNMSGFRVGFAVGNKDMIQALKK-------Y----Q-THTNAGMFGALQDAAIYALNHY--DDFLEEQSN 310 (404)
T ss_dssp EEEEEESTTTTTCGGGCCEEEEECHHHHHHHHH-------H----H-HHHCCCCCHHHHHHHHHHHHHC--HHHHHHHHH
T ss_pred EEEEEecchhccCchhheEeEecCHHHHHHHHH-------H----H-hhccCCCCHHHHHHHHHHHhcC--HHHHHHHHH
Confidence 456778899999777 5889999998865321 1 1 1123467888888777776643 235777888
Q ss_pred HHHHHHHHHHHHHhccC--------Ccccc-cCCCCCcccHHHHHHHH-HccCccccC--CCC--CCccceeeccCCCHH
Q psy8733 528 NSLQKSVLLYQEIDNSD--------KFYEC-PVQAGFPLDELFLKEAK-AHNMIQLKG--HRL--VGGIRASIYNAITVD 593 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~~--------~~~~~-~v~~~~~~~~~~~~~~~-~~~i~~~~g--~~~--~~~~r~~~~~a~~~~ 593 (621)
+.+++.+.+.+.+++.. +||.. .+.++ ....+|.+.+. ++||....| ++. .+.||++.= .+.|
T Consensus 311 ~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~-~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~--~~~e 387 (404)
T 2o1b_A 311 VFKTRRDRFEAMLAKADLPFVHAKGGIYVWLETPPG-YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLA--LDDQ 387 (404)
T ss_dssp HHHHHHHHHHHHHHHTTCCEECCCBSSEEEEECCTT-CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECC--SCTT
T ss_pred HHHHHHHHHHHHHHhcCCeecCCCcceEEEEeCCCC-CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEc--CCHH
Confidence 88899999999998641 22221 11111 11245777754 689987655 332 567999964 3788
Q ss_pred HHHHHHHHHHHHHHH
Q psy8733 594 EAVILVKFMKEFRHK 608 (621)
Q Consensus 594 ~~~~l~~~~~~~~~~ 608 (621)
+++.+++-|+++.++
T Consensus 388 ~l~~~l~~l~~~l~~ 402 (404)
T 2o1b_A 388 KLDEAAIRLTELAYL 402 (404)
T ss_dssp HHHHHHHHHHGGGGG
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888877766544
No 263
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=93.64 E-value=0.099 Score=53.70 Aligned_cols=160 Identities=12% Similarity=0.120 Sum_probs=115.0
Q ss_pred HHHHHhhccccc-ccCCcEEeeecHhHhhhcCCC----CCceeeee-------ecccCCCccCCCchhHHHHHHHHHHHH
Q psy8733 449 FGVIIAGAQKNI-GPAGITVVIVREDLLEYALPI----TPTVFHFK-------INADNNSVYNTPPTFVVHVIQRVFAWI 516 (621)
Q Consensus 449 ~~~~~a~~qk~~-GpaGl~v~iv~~~~l~~~~~~----~p~~~~y~-------~~~~~~s~~nTP~~~~iy~~~~vl~~~ 516 (621)
.|++..|.+|.+ |+.|+++++++++++++..+. .+..+++. ..........|||+..++.+...++++
T Consensus 201 ~d~~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~ 280 (393)
T 3kgw_A 201 IDIMYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALI 280 (393)
T ss_dssp CCEEEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHH
T ss_pred CCEEEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHH
Confidence 467788899988 599999999999998764321 11111111 012234667899999999999999988
Q ss_pred HhcCChHHHHHHHHHHHHHHHHHHhccCCcccc-c-----------CC-CCCcccHHHHHHHHHc-cCccccCCCC--CC
Q psy8733 517 KRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC-P-----------VQ-AGFPLDELFLKEAKAH-NMIQLKGHRL--VG 580 (621)
Q Consensus 517 ~~~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~-~-----------v~-~~~~~~~~~~~~~~~~-~i~~~~g~~~--~~ 580 (621)
.+. |++.+.++.+++.+.+++.+++. ++-.. + +. +......+|.+.+.++ ||....|... .+
T Consensus 281 ~~~-~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~ 358 (393)
T 3kgw_A 281 AEQ-GLENCWRRHREATAHLHKHLQEM-GLKFFVKDPEIRLPTITTVTVPAGYNWRDIVSYVLDHFSIEISGGLGPTEER 358 (393)
T ss_dssp HHH-CHHHHHHHHHHHHHHHHHHHHHT-TCCBSSSSGGGBCSSEEEEECCTTBCHHHHHHHHHHHHCEECBCCCGGGTTT
T ss_pred HHh-hHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEeCCcccCCCC
Confidence 765 59999999999999999999876 32111 0 00 0011235688888777 9987776643 56
Q ss_pred ccceeecc-CCCHHHHHHHHHHHHHHHHHcC
Q psy8733 581 GIRASIYN-AITVDEAVILVKFMKEFRHKHS 610 (621)
Q Consensus 581 ~~r~~~~~-a~~~~~~~~l~~~~~~~~~~~~ 610 (621)
.||++..+ .++.|+++.+++.|+++.++..
T Consensus 359 ~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~ 389 (393)
T 3kgw_A 359 VLRIGLLGYNATTENVDRVAEALREALQHCP 389 (393)
T ss_dssp EEEEECCGGGCCHHHHHHHHHHHHHHHHHSC
T ss_pred EEEEEecccCCCHHHHHHHHHHHHHHHHhhh
Confidence 79999855 4699999999999999987764
No 264
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=93.57 E-value=0.095 Score=53.06 Aligned_cols=156 Identities=15% Similarity=0.113 Sum_probs=113.2
Q ss_pred HHHHHhhccccc-ccCCcEEeeecHhHhhhcCCCCCceeeee---ecccCCCccCCCchhHHHHHHHHHHHHHhcCChHH
Q psy8733 449 FGVIIAGAQKNI-GPAGITVVIVREDLLEYALPITPTVFHFK---INADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAK 524 (621)
Q Consensus 449 ~~~~~a~~qk~~-GpaGl~v~iv~~~~l~~~~~~~p~~~~y~---~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~ 524 (621)
.|++..|.+|.+ ||.|+++++++++++++..+ -...++++ ..........|||.+.++.+...++++.+. ++.
T Consensus 176 ~d~~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~--~~~ 252 (352)
T 1iug_A 176 VDAAASGSQKGLMCPPGLGFVALSPRALERLKP-RGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPR--LEE 252 (352)
T ss_dssp CSEEEEESSSTTCCCSCEEEEEECHHHHHTCCC-CSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG--HHH
T ss_pred eeEEEecCcccccCCCceeEEEECHHHHHHhhC-CCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH--HHH
Confidence 567788999955 68999999999998866332 00111111 111224557799999999999999988754 889
Q ss_pred HHHHHHHHHHHHHHHHhccCCcccccCC--C--------CCc-ccHHHHHHHHHccCccccCCCC--CCccceeeccCCC
Q psy8733 525 MEQNSLQKSVLLYQEIDNSDKFYECPVQ--A--------GFP-LDELFLKEAKAHNMIQLKGHRL--VGGIRASIYNAIT 591 (621)
Q Consensus 525 ~~~~~~~ka~~lY~~id~~~~~~~~~v~--~--------~~~-~~~~~~~~~~~~~i~~~~g~~~--~~~~r~~~~~a~~ 591 (621)
+.++.+++.+.+++.+++. ++ ..... . ... -..+|.+.+.++||....|++. .+.||++.-..++
T Consensus 253 ~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRi~~~~~~~ 330 (352)
T 1iug_A 253 HLALKAWQNALLYGVGEEG-GL-RPVPKRFSPAVAAFYLPEGVPYARVKEAFAQRGAVIAGGQGPLKGKVFRLSLMGAYD 330 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TC-EESCSSBCTTCEEEECCTTCCHHHHHHHHHTTTEECEECCGGGTTTEEEECCCSSCC
T ss_pred HHHHHHHHHHHHHHHHHHC-CC-cccccccCCeEEEEEcCCCCCHHHHHHHHHHCCEEEEeCCCccCCCEEEEEccccCC
Confidence 9999999999999999874 32 11111 0 001 2356888899999987777643 5679999999899
Q ss_pred HHHHHHHHHHHHHHHHHc
Q psy8733 592 VDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 592 ~~~~~~l~~~~~~~~~~~ 609 (621)
.|+++.+++.|+++.++-
T Consensus 331 ~~~i~~~~~~l~~~~~~~ 348 (352)
T 1iug_A 331 RYEALGVAGMFREVLEEI 348 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999887654
No 265
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=93.52 E-value=0.087 Score=53.66 Aligned_cols=156 Identities=8% Similarity=0.083 Sum_probs=113.5
Q ss_pred HHHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 449 FGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
.|++..|.+|.+||.|+++++++++. ...|.+.. ..........|||.+.+..+...++++.+ +++.+.++
T Consensus 190 ~d~~~~s~~K~~g~~g~g~~~~~~~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~al~~~~~--~~~~~~~~ 260 (382)
T 4hvk_A 190 ADMLTISSNDIYGPKGVGALWIRKEA-----KLQPVILG--GGQENGLRSGSENVPSIVGFGKAAEITAM--EWREEAER 260 (382)
T ss_dssp CSEEEEESGGGTSCTTCEEEEEETTC-----CCCCSSCS--SCTGGGTSCSCCCHHHHHHHHHHHHHHHH--HHHHHHHH
T ss_pred CCEEEEeHHHhcCCCceEEEEEcCcc-----CcCccccc--CCCcCccccCCcCHHHHHHHHHHHHHHHh--hHHHHHHH
Confidence 46788899998899999999999876 11122211 11223455789999999999999998764 68999999
Q ss_pred HHHHHHHHHHHHhccCCcccccCCC-----------CCcccHHHHHHHHHccCccccCCCC-------------------
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPVQA-----------GFPLDELFLKEAKAHNMIQLKGHRL------------------- 578 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v~~-----------~~~~~~~~~~~~~~~~i~~~~g~~~------------------- 578 (621)
.++.++.+++.|.+.+++-...... .......|.+.++++||....|...
T Consensus 261 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~ 340 (382)
T 4hvk_A 261 LRRLRDRIIDNVLKIEESYLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKHE 340 (382)
T ss_dssp HHHHHHHHHHHHTTSTTEEECSCSSSBCTTEEEEEETTCCHHHHHHHHHHTTCBCBCC--------CCCHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHhcCCCeEEeCCccccCCCEEEEEECCCCHHHHHHHHHHCCEEEeeCCccCCCCCcchHHHHHcCCChh
Confidence 9999999999998765432111110 0112356889999999997766411
Q ss_pred --CCccceeeccCCCHHHHHHHHHHHHHHHHHcCCCC
Q psy8733 579 --VGGIRASIYNAITVDEAVILVKFMKEFRHKHSRLS 613 (621)
Q Consensus 579 --~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~~~~~~ 613 (621)
.+.||++.-+.++.||++.+++.|+++.++..+.+
T Consensus 341 ~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~~~ 377 (382)
T 4hvk_A 341 EAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRSMS 377 (382)
T ss_dssp HHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 46799999999999999999999999887654433
No 266
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=93.38 E-value=0.12 Score=53.50 Aligned_cols=162 Identities=12% Similarity=-0.003 Sum_probs=114.6
Q ss_pred hHHHHHhhccccc-ccCCcEEeeecHhHhhhcCCC---CCc-----------------eeeeeec----ccCCCccCCCc
Q psy8733 448 FFGVIIAGAQKNI-GPAGITVVIVREDLLEYALPI---TPT-----------------VFHFKIN----ADNNSVYNTPP 502 (621)
Q Consensus 448 ~~~~~~a~~qk~~-GpaGl~v~iv~~~~l~~~~~~---~p~-----------------~~~y~~~----~~~~s~~nTP~ 502 (621)
..|++..+.+|.+ ||.|+++++++++++++..+. .|. .+++... ......+.|||
T Consensus 190 ~~d~~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (411)
T 3nnk_A 190 GLDAVSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEA 269 (411)
T ss_dssp TCSEEECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCC
T ss_pred CCcEEEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCC
Confidence 3577888999984 699999999999998653321 111 1111000 12345668999
Q ss_pred hhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhccCCcccc-cCC-----------CCCcccHHHHHHHHHc-c
Q psy8733 503 TFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC-PVQ-----------AGFPLDELFLKEAKAH-N 569 (621)
Q Consensus 503 ~~~iy~~~~vl~~~~~~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~-~v~-----------~~~~~~~~~~~~~~~~-~ 569 (621)
+..++.+...++++.+. |++.+.++.++..+.+++.|++. ++-.. +.. +......++.+.+.++ |
T Consensus 270 ~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~g 347 (411)
T 3nnk_A 270 TTALFGARECARLILQE-GLDYGIARHKLHGDALVKGIQAM-GLETFGDLKHKMNNVLGVVIPQGINGDQARKLMLEDFG 347 (411)
T ss_dssp HHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHc-CCEeCCCcccccccEEEEECCCCCCHHHHHHHHHHhcC
Confidence 99999999999998766 59999999999999999999875 22111 000 0011234577777665 9
Q ss_pred CccccCCCC--CCccceee-ccCCCHHHHHHHHHHHHHHHHHcCC
Q psy8733 570 MIQLKGHRL--VGGIRASI-YNAITVDEAVILVKFMKEFRHKHSR 611 (621)
Q Consensus 570 i~~~~g~~~--~~~~r~~~-~~a~~~~~~~~l~~~~~~~~~~~~~ 611 (621)
|....|++. .+.||++. -..++.|+++.+++.|+++.++.+.
T Consensus 348 i~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~ 392 (411)
T 3nnk_A 348 IEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYLKF 392 (411)
T ss_dssp EEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHcCC
Confidence 998777754 45699997 5567999999999999999887643
No 267
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=93.23 E-value=0.1 Score=53.37 Aligned_cols=153 Identities=7% Similarity=0.048 Sum_probs=109.8
Q ss_pred HHHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 449 FGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
.|++..|.+|.+||.|+++++++++. + .-|.+..+. ........|||...++.+...++++.+ |++.+.++
T Consensus 190 ~di~~~s~sK~~g~~g~G~~~~~~~~--~---l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~al~~~~~--~~~~~~~~ 260 (382)
T 4eb5_A 190 ADMLTISSNDIYGPKGVGALWIRKEA--K---LQPVILGGG--QENGLRSGSENVPSIVGFGKAAEITAM--EWREEAER 260 (382)
T ss_dssp CSEEEEETGGGTCCSSCEEEEEETTC--C---CCCSSCSSC--TGGGTSCSCCCHHHHHHHHHHHHHHHH--HHHHHHHH
T ss_pred CCEEEeehHHhcCCCceEEEEEcccc--c---cCceecCCC--ccccccCCCccHHHHHHHHHHHHHHHH--hHHHHHHH
Confidence 46777889999999999999999874 1 111111000 012345678999999999999998875 58899999
Q ss_pred HHHHHHHHHHHHhccCCcccccCCC----C--------CcccHHHHHHHHHccCccccCCC-------------------
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPVQA----G--------FPLDELFLKEAKAHNMIQLKGHR------------------- 577 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v~~----~--------~~~~~~~~~~~~~~~i~~~~g~~------------------- 577 (621)
.+++++.+++.|++.+++ .....+ . ..-...|.+.+.++||....|+.
T Consensus 261 ~~~~~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~ 339 (382)
T 4eb5_A 261 LRRLRDRIIDNVLKIEES-YLNGHPEKRLPNNVNVRFSYIEGESIVLSLDMAGIQASTGSACSSKTLQPSHVLMACGLKH 339 (382)
T ss_dssp HHHHHHHHHHHHTTSTTE-EECSCSSSBCTTEEEEEETTSCHHHHHHHHHHHTCBCBCCCGGGTSSCCCCHHHHHTTCCH
T ss_pred HHHHHHHHHHHHhhCCCe-EEeCCcccCCCCEEEEEeCCcCHHHHHHHHHHCCEEEeccccccCCCCcccHHHHHcCCCh
Confidence 999999999999876543 111110 0 01234688888899999776642
Q ss_pred --CCCccceeeccCCCHHHHHHHHHHHHHHHHHcCC
Q psy8733 578 --LVGGIRASIYNAITVDEAVILVKFMKEFRHKHSR 611 (621)
Q Consensus 578 --~~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~~~~ 611 (621)
..+.||++.-+.++.|+++.+++.|+++.++...
T Consensus 340 ~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 340 EEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp HHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1467999988889999999999999988765443
No 268
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=93.16 E-value=0.12 Score=53.71 Aligned_cols=160 Identities=13% Similarity=0.083 Sum_probs=114.2
Q ss_pred HHHHHhhccccc-ccCCcEEeeecHhHhhhcCCC----------------------CCceeeeeec----ccCCCccCCC
Q psy8733 449 FGVIIAGAQKNI-GPAGITVVIVREDLLEYALPI----------------------TPTVFHFKIN----ADNNSVYNTP 501 (621)
Q Consensus 449 ~~~~~a~~qk~~-GpaGl~v~iv~~~~l~~~~~~----------------------~p~~~~y~~~----~~~~s~~nTP 501 (621)
.|++..+.+|.+ ||.|+++++++++++++..+. .+..++.... ......+.||
T Consensus 189 ~d~~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (416)
T 3isl_A 189 IDAAIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTE 268 (416)
T ss_dssp CSEEECCSSSTTCCCSSEEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCC
T ss_pred CCEEEecCccccCCCCCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCC
Confidence 577888999984 699999999999998764321 1111111110 1233457799
Q ss_pred chhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhccCCcccc-cCC-----------CCCcccHHHHHHHHHc-
Q psy8733 502 PTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC-PVQ-----------AGFPLDELFLKEAKAH- 568 (621)
Q Consensus 502 ~~~~iy~~~~vl~~~~~~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~-~v~-----------~~~~~~~~~~~~~~~~- 568 (621)
|++.++.+...++++.+. |++.+.++.++.++.+++.|++. ++-.. +.. +......+|.+.+.++
T Consensus 269 ~~~~~~a~~~al~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 346 (416)
T 3isl_A 269 ATTMLYALREGVRLVLEE-GLETRFERHRHHEAALAAGIKAM-GLRLFGDDSCKMPVVTCVEIPGGIDGESVRDMLLAQF 346 (416)
T ss_dssp CHHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHT-TCCBCSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHc-CCEeccCccccCCcEEEEeCCCCCCHHHHHHHHHHhC
Confidence 999999999999988766 59999999999999999999874 32110 000 0111245688888776
Q ss_pred cCccccCCCC--CCccceeeccCCCHHH-HHHHHHHHHHHHHHcC
Q psy8733 569 NMIQLKGHRL--VGGIRASIYNAITVDE-AVILVKFMKEFRHKHS 610 (621)
Q Consensus 569 ~i~~~~g~~~--~~~~r~~~~~a~~~~~-~~~l~~~~~~~~~~~~ 610 (621)
||....|++. .+.||++..+..+.+| ++.+++.|+++.++.+
T Consensus 347 gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 347 GIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp CEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 9998887754 5669999977667766 9999999999988764
No 269
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=93.07 E-value=0.13 Score=53.15 Aligned_cols=154 Identities=16% Similarity=0.136 Sum_probs=91.4
Q ss_pred HHHHHhhcccccccCCcEEee-ecHhHhh-hcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 449 FGVIIAGAQKNIGPAGITVVI-VREDLLE-YALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~v~i-v~~~~l~-~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
.|++..|.+|-+||.|+++++ ++++.+. ......|.+.. .. ........|||++.++.+...++++.+ +++.+.
T Consensus 211 ~d~~~~s~~K~~g~~g~g~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~ 286 (400)
T 3vax_A 211 IDMISISGHKIGAPKGVGALVTRRREEMDDERVPLEPIMFG-GG-QERKLRPGTLPVPLIMGLAEAAKIFEA--EHAQWQ 286 (400)
T ss_dssp CSEEEEETGGGTSCSSCEEEEECBCSSSTTCBCCCCCSSCS-SC-TGGGTSCSCCCHHHHHHHHHHHHHHHH--SHHHHH
T ss_pred CcEEEEeHHHhCCCCceEEEEEecchhccccccccCceecC-CC-ceeeeecCCCCHHHHHHHHHHHHHHHh--hHHHHH
Confidence 467788999988899999999 9984332 11222232221 11 223456789999999999999998875 689999
Q ss_pred HHHHHHHHHHHHHHhccCCcccccCCC-----------CCcccHHHHHHHHHccCccccCC----------------CC-
Q psy8733 527 QNSLQKSVLLYQEIDNSDKFYECPVQA-----------GFPLDELFLKEAKAHNMIQLKGH----------------RL- 578 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~~~~~~~v~~-----------~~~~~~~~~~~~~~~~i~~~~g~----------------~~- 578 (621)
++.+++.+.+++.|+ .+++-...-.. ...-.+.|.+.++ +||....|. +.
T Consensus 287 ~~~~~~~~~l~~~L~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~ 364 (400)
T 3vax_A 287 VAAQDLRSRLLAGLA-STSFQVNGDQDHVVPHILNLSFEDVDAEAFLVTLK-DLVAVATGSASTSASFTPSHVLRAMGLP 364 (400)
T ss_dssp HHHHHHHHHHHHHHT-TTTCEECSCTTSBCTTEEEEECTTCCHHHHHHHHH-HHHHHTTTTEEEEEEECCHHHHHTTTCC
T ss_pred HHHHHHHHHHHHhhC-CCCEEEeCCcccCCCCEEEEEeCCCCHHHHHHHHh-cCcEEEecccccCCCCCccHHHHHcCCC
Confidence 999999999999998 55432111010 0112356888888 999866552 11
Q ss_pred ----CCccceee-ccCCCHHHHHHHHHHHHHHHHH
Q psy8733 579 ----VGGIRASI-YNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 579 ----~~~~r~~~-~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
.+.||++. ...++.|+++.+++.|+++.++
T Consensus 365 ~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 365 EEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp HHHHTSEEEEEEEEC--------------------
T ss_pred ccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 37799999 9999999999999999887643
No 270
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=92.97 E-value=0.19 Score=51.33 Aligned_cols=150 Identities=15% Similarity=0.084 Sum_probs=106.3
Q ss_pred HHHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 449 FGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
.|++..|.+|.+||+|++++++++++ ...+.+..+. ........|+|.+.++.+...|+++.+ +++.+.++
T Consensus 194 ~di~~~s~sK~~g~~G~G~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~ 264 (384)
T 1eg5_A 194 VDYASFSAHKFHGPKGVGITYIRKGV-----PIRPLIHGGG--QERGLRSGTQNVPGIVGAARAMEIAVE--ELSEAAKH 264 (384)
T ss_dssp CSEEEEEGGGGTSCTTCEEEEECTTS-----CCCCSBCSSC--TTTTTBCSCCCHHHHHHHHHHHHHHHH--THHHHHHH
T ss_pred CCEEEecHHHhcCCCceEEEEEcCCC-----ccccccccCc--ccccccCCCCChHHHHHHHHHHHHHHH--hHHHHHHH
Confidence 47788899999999999999999875 1112221111 011234568999999999999988654 68899999
Q ss_pred HHHHHHHHHHHHhccCCcccccCC-----CC------Cc-ccHHHHHHHHHccCccccCC--CC----------------
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPVQ-----AG------FP-LDELFLKEAKAHNMIQLKGH--RL---------------- 578 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v~-----~~------~~-~~~~~~~~~~~~~i~~~~g~--~~---------------- 578 (621)
.+++++.+++.|++ .++ ..... .. .. -...|.+.++++||....|. ..
T Consensus 265 ~~~~~~~l~~~L~~-~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~ 342 (384)
T 1eg5_A 265 MEKLRSKLVSGLMN-LGA-HIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVSTSSACTSKDERLRHVLDAMGVDR 342 (384)
T ss_dssp HHHHHHHHHHHHHT-TTC-EECSCTTSBCTTEEEEECTTCCHHHHHHHHHHTTEECBC------------CHHHHTTCCH
T ss_pred HHHHHHHHHHHhCC-CCe-EEeCCcccCCCCEEEEEeCCCCHHHHHHHHhhCCeEEeccccccCCCCcchHHHHHcCCCh
Confidence 99999999999987 443 11110 00 01 23568888999999977653 21
Q ss_pred ---CCccceeeccCCCHHHHHHHHHHHHHHHHHc
Q psy8733 579 ---VGGIRASIYNAITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 579 ---~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~~ 609 (621)
.+.||++.-+.++.||++.+++.|+++.++.
T Consensus 343 ~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 376 (384)
T 1eg5_A 343 RIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL 376 (384)
T ss_dssp HHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred hhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2569999887899999999999999987654
No 271
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=92.56 E-value=0.14 Score=53.10 Aligned_cols=137 Identities=16% Similarity=0.150 Sum_probs=83.3
Q ss_pred HhhcccccccCC--cEEeee---cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHH--Hh--cCChH
Q psy8733 453 IAGAQKNIGPAG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWI--KR--QGGLA 523 (621)
Q Consensus 453 ~a~~qk~~GpaG--l~v~iv---~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~--~~--~gg~~ 523 (621)
..|.-|.+|++| ++.+++ +++++++... ..+ ....+++++||.++..++...++.- .+ .-.++
T Consensus 242 ~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~------~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 313 (397)
T 3fsl_A 242 SNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLG------QLK--ATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVE 313 (397)
T ss_dssp EEECTTTTTCGGGCCEEEEEECSSHHHHHHHHH------HHH--HHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred EecccccccCcCCCeeEEEEecCCHHHHHHHHH------HHH--HHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 345559999888 455554 4555543210 001 0113567888888888877766531 10 12467
Q ss_pred HHHHHHHHHHHHHHHHHhccC---CcccccCCCC----CcccHH-HHHHHHHccCccccCCCCCCccceeeccCCCHHHH
Q psy8733 524 KMEQNSLQKSVLLYQEIDNSD---KFYECPVQAG----FPLDEL-FLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEA 595 (621)
Q Consensus 524 ~~~~~~~~ka~~lY~~id~~~---~~~~~~v~~~----~~~~~~-~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~ 595 (621)
.+.++.+++.+.+++.+++.. ++-..+.+.+ ..+... +.+.++++||....|- |++. ..++.|++
T Consensus 314 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~------Ris~-~~~~~~~i 386 (397)
T 3fsl_A 314 EMRTRILAMRQELVKVLSTEMPERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASG------RMCV-AGLNTANV 386 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSCCTHHHHCCSSEEECCCCHHHHHHHHHTTCEECCTTC------EEEG-GGCCTTTH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCceeecCCceEEEecCCCHHHHHHHHHhCCEEECCCC------eEEE-EecCHhhH
Confidence 788888999999999998753 2110000111 123333 5677788999877652 8854 56688889
Q ss_pred HHHHHHHHH
Q psy8733 596 VILVKFMKE 604 (621)
Q Consensus 596 ~~l~~~~~~ 604 (621)
+.+++-|++
T Consensus 387 ~~~~~~l~~ 395 (397)
T 3fsl_A 387 QRVAKAFAA 395 (397)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999888875
No 272
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=92.39 E-value=0.19 Score=53.79 Aligned_cols=158 Identities=13% Similarity=0.138 Sum_probs=111.6
Q ss_pred hhHHHHHhhccccc--ccCCcEEeeecHhHhhhcCCCCCce--------------eeeeecccCCCccCCCchhHHHHHH
Q psy8733 447 FFFGVIIAGAQKNI--GPAGITVVIVREDLLEYALPITPTV--------------FHFKINADNNSVYNTPPTFVVHVIQ 510 (621)
Q Consensus 447 ~~~~~~~a~~qk~~--GpaGl~v~iv~~~~l~~~~~~~p~~--------------~~y~~~~~~~s~~nTP~~~~iy~~~ 510 (621)
...|++..|..|.+ ||.|++++++++++++...+..... +.|...+... ...|||++++..+.
T Consensus 265 ~~~D~~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~a~~ 343 (465)
T 3e9k_A 265 WGVDFACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGF-RISNPPILLVCSLH 343 (465)
T ss_dssp HTCCEEEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGG-CCSCCCHHHHHHHH
T ss_pred cCCCEEEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHh-ccCCccHHHHHHHH
Confidence 34567778999999 7999999999999987643322110 1111111111 13499999999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcc----------CCcc-cccCCC---CC----c---ccHHHHHHHHHcc
Q psy8733 511 RVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS----------DKFY-ECPVQA---GF----P---LDELFLKEAKAHN 569 (621)
Q Consensus 511 ~vl~~~~~~gg~~~~~~~~~~ka~~lY~~id~~----------~~~~-~~~v~~---~~----~---~~~~~~~~~~~~~ 569 (621)
..++++.+. |++.+.++..+..+.+++.+++. +++- ..|.+. +. + ....+.+.+.++|
T Consensus 344 aal~~~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~~~~~l~~~L~~~G 422 (465)
T 3e9k_A 344 ASLEIFKQA-TMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNIITPSHVEERGCQLTITFSVPNKDVFQELEKRG 422 (465)
T ss_dssp HHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHCC---------CEEECSCSSGGGBCSCEEEEECCTTCCHHHHHHTTT
T ss_pred HHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEeCCCCHhhcccEEEEEecCCHHHHHHHHHHCC
Confidence 999999876 59999999999999999999874 3321 111110 10 1 1245788889999
Q ss_pred CccccCCCCCCccceee-ccCCCHHHHHHHHHHHHHHHHH
Q psy8733 570 MIQLKGHRLVGGIRASI-YNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 570 i~~~~g~~~~~~~r~~~-~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
|+.. ++..+.||++. -..++.||++.+++.|++..++
T Consensus 423 i~v~--~~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~ 460 (465)
T 3e9k_A 423 VVCD--KRNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDS 460 (465)
T ss_dssp EECE--EETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC
T ss_pred EEEe--cCCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHh
Confidence 9864 44567899998 6788999999999999987653
No 273
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=92.22 E-value=0.59 Score=48.24 Aligned_cols=141 Identities=9% Similarity=-0.027 Sum_probs=90.6
Q ss_pred HhhcccccccCC--cEEeeec-HhHhhhcCCCCCceeeeeecccC-CCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 453 IAGAQKNIGPAG--ITVVIVR-EDLLEYALPITPTVFHFKINADN-NSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 453 ~a~~qk~~GpaG--l~v~iv~-~~~l~~~~~~~p~~~~y~~~~~~-~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
..|..|.+|++| ++.++++ +++++... . ... ..++.|+|.++.+.+...|+... ..++.+.++
T Consensus 228 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~ 294 (390)
T 1d2f_A 228 LTSGSKSFNIPALTGAYGIIENSSSRDAYL----------S-ALKGRDGLSSPSVLALTAHIAAYQQGA--PWLDALRIY 294 (390)
T ss_dssp EECSHHHHTCGGGCCEEEEECSHHHHHHHH----------H-HHHTTSCCCSCCHHHHHHHHHHHHHCH--HHHHHHHHH
T ss_pred ccCccHhhcccChhheEEEECCHHHHHHHH----------H-HHhhhcccCCCCHHHHHHHHHHHhcCH--HHHHHHHHH
Confidence 677789999888 4888885 67765421 1 111 34566899999888877776422 236777888
Q ss_pred HHHHHHHHHHHHhc-cCCc---------ccc-cCCCCCcccHHHHHHHH-HccCccccCC--C--CCCccceeeccCCCH
Q psy8733 529 SLQKSVLLYQEIDN-SDKF---------YEC-PVQAGFPLDELFLKEAK-AHNMIQLKGH--R--LVGGIRASIYNAITV 592 (621)
Q Consensus 529 ~~~ka~~lY~~id~-~~~~---------~~~-~v~~~~~~~~~~~~~~~-~~~i~~~~g~--~--~~~~~r~~~~~a~~~ 592 (621)
.+++.+.+.+.+++ .+++ +.. .+.+...-...|.+.+. ++||....|. + ..+.||++.= .+.
T Consensus 295 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~ 372 (390)
T 1d2f_A 295 LKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAG--CPR 372 (390)
T ss_dssp HHHHHHHHHHHHHHHCSSCCCCCCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECC--SCH
T ss_pred HHHHHHHHHHHHHhhCCCCEEecCCccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEec--CCH
Confidence 88999999999987 3432 210 11100011345788887 6899875553 3 2567999854 367
Q ss_pred HHHHHHHHHHHHHHHH
Q psy8733 593 DEAVILVKFMKEFRHK 608 (621)
Q Consensus 593 ~~~~~l~~~~~~~~~~ 608 (621)
|+++..++-|++..++
T Consensus 373 ~~l~~~l~~l~~~l~~ 388 (390)
T 1d2f_A 373 SKLEKGVAGLINAIRA 388 (390)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 7777777777665543
No 274
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=92.19 E-value=0.21 Score=51.56 Aligned_cols=155 Identities=13% Similarity=0.123 Sum_probs=107.1
Q ss_pred hHHHHHhhcccccc-cCCcEEeeecHhHhhhcCCC---C-Cceee--e-eecccCCCccC-CCchhHHHHHHHHHHHHHh
Q psy8733 448 FFGVIIAGAQKNIG-PAGITVVIVREDLLEYALPI---T-PTVFH--F-KINADNNSVYN-TPPTFVVHVIQRVFAWIKR 518 (621)
Q Consensus 448 ~~~~~~a~~qk~~G-paGl~v~iv~~~~l~~~~~~---~-p~~~~--y-~~~~~~~s~~n-TP~~~~iy~~~~vl~~~~~ 518 (621)
..|+++.|.+|.+| |.|+++++++++++++.... + +..++ + ........+.. |||.+.++.+...|+++.+
T Consensus 211 ~~di~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~ 290 (393)
T 1vjo_A 211 GVDLAYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQ 290 (393)
T ss_dssp TCSEEECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHH
T ss_pred CccEEEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 34778889999986 77999999999998764221 1 11110 0 00001223344 9999999999999999854
Q ss_pred cCChHHHHHHHHHHHHHHHHHHhccCCcccccCCC-------------CCcccHHHHHHHHHc-cCccccCCC--CCCcc
Q psy8733 519 QGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQA-------------GFPLDELFLKEAKAH-NMIQLKGHR--LVGGI 582 (621)
Q Consensus 519 ~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~~v~~-------------~~~~~~~~~~~~~~~-~i~~~~g~~--~~~~~ 582 (621)
. |++.+.++.+++.+.+++.+++. ++ ...... .......|.+.+.++ ||....|.. ..+.+
T Consensus 291 ~-~~~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~i 367 (393)
T 1vjo_A 291 E-GLANCWQRHQKNVEYLWERLEDI-GL-SLHVEKEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGELAGKVW 367 (393)
T ss_dssp H-CHHHHHHHHHHHHHHHHHHHHHT-TC-CBSSCGGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGGTTTEE
T ss_pred c-cHHHHHHHHHHHHHHHHHHHHHc-CC-cccCCccccCCcEEEEEcCCCCCHHHHHHHHHhhCCEEEecCccccCCCEE
Confidence 4 59999999999999999999875 32 111000 001235688888887 999766653 36779
Q ss_pred ceeecc-CCCHHHHHHHHHHHHHH
Q psy8733 583 RASIYN-AITVDEAVILVKFMKEF 605 (621)
Q Consensus 583 r~~~~~-a~~~~~~~~l~~~~~~~ 605 (621)
|++.++ ..+.|+++.+++.|+++
T Consensus 368 Ris~~~~~~~~~~i~~~~~~l~~~ 391 (393)
T 1vjo_A 368 RVGLMGFNSRKESVDQLIPALEQV 391 (393)
T ss_dssp EEECCGGGCSHHHHHHHHHHHHHH
T ss_pred EEeCCccCChHHHHHHHHHHHHHH
Confidence 999766 45677899999998876
No 275
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=91.58 E-value=0.26 Score=52.91 Aligned_cols=141 Identities=10% Similarity=0.023 Sum_probs=86.9
Q ss_pred HHHHHhhccccc-ccCCcEEeeec-HhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 449 FGVIIAGAQKNI-GPAGITVVIVR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 449 ~~~~~a~~qk~~-GpaGl~v~iv~-~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
.|++.++.+|.+ ||-|++++++| ++++++..+ ... +....| +.+.. ...+..+.+ .|++.+.
T Consensus 289 ~D~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l~~---~~~--------g~~~~~-~~~~~---~aal~~l~~-~~~~~~~ 352 (456)
T 2z67_A 289 VDAVVSSSDKNLLTPIGGGLVYSTDAEFIKEISL---SYP--------GRASAT-PVVNT---LVSLLSMGS-KNYLELV 352 (456)
T ss_dssp CSEEEEEHHHHHCCCSSCEEEEESCHHHHHHHHT---TSC--------SCBCSH-HHHHH---HHHHHHHHH-HHHHHHH
T ss_pred CCEEEEcCCCCcCCCCCeEEEEEcCHHHHhhcCc---CCC--------CCCCCC-HHHHH---HHHHHHHHH-HHHHHHH
Confidence 566778899986 59999999995 777765422 111 111112 23333 333444433 3588888
Q ss_pred HHHHHHHHHHHHHHhccC---CcccccCCCC-------CcccHHHHHHHHHccCc--ccc-------CCC----CCCccc
Q psy8733 527 QNSLQKSVLLYQEIDNSD---KFYECPVQAG-------FPLDELFLKEAKAHNMI--QLK-------GHR----LVGGIR 583 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~---~~~~~~v~~~-------~~~~~~~~~~~~~~~i~--~~~-------g~~----~~~~~r 583 (621)
++..+.++.+++.|.+.+ ++-..+.+.- .....++.+.+.++|+. ..- |.. ..+.+|
T Consensus 353 ~~~~~~~~~l~~~L~~~~~~~g~~v~~~~~~v~~~~~~~~~~~~l~~~L~~~gi~~~rv~~~~g~f~G~~~~~~~~~~vr 432 (456)
T 2z67_A 353 KNQKNSKKLLDELLNDLSKKTGGKFLDVESPIASCISVNSDPVEIAAKLYNLRVTGPRGIKKTDHFGNCYLGTYTHDYIV 432 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCCBCCCCCSSEEEEECSSCHHHHHHHHHHTTEESCEEECTTCHHHHTCSSCCSCCEEE
T ss_pred HHHHHHHHHHHHHHHhcccccCCEecCCCCeEEEEEecccHHHHHHHHHHHcCCCcceEEeecCccccccccccCcchhh
Confidence 999999999999998763 3211111110 01124677888888862 111 110 145688
Q ss_pred eeeccCCCHHHHHHHHHHHHHH
Q psy8733 584 ASIYNAITVDEAVILVKFMKEF 605 (621)
Q Consensus 584 ~~~~~a~~~~~~~~l~~~~~~~ 605 (621)
++.-..+|.||++.+++-|+++
T Consensus 433 ~s~~~~~t~eeid~~l~~L~~~ 454 (456)
T 2z67_A 433 MNAAIGVRTEDIVNSVSKLEKI 454 (456)
T ss_dssp EECCTTCCHHHHHHHHHHHHTC
T ss_pred hhhhcCCCHHHHHHHHHHHHHH
Confidence 8877789999999999998764
No 276
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=91.30 E-value=0.31 Score=50.53 Aligned_cols=151 Identities=9% Similarity=0.032 Sum_probs=108.4
Q ss_pred HHHHHhhcccccccCCcE-EeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcC-------
Q psy8733 449 FGVIIAGAQKNIGPAGIT-VVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQG------- 520 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~-v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~g------- 520 (621)
.|++..|.+|.+||- ++ +++++++++++..+.. ..|.......-...|||...+..+...++++.+.|
T Consensus 218 ~d~~~~s~~K~~g~~-~G~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~ 293 (406)
T 3cai_A 218 ADVVTVNAHAWGGPP-IGAMVFRDPSVMNSFGSVS---TNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSR 293 (406)
T ss_dssp CSEEEEEGGGGTSCS-CEEEEESCHHHHHTSCCCC---SCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSH
T ss_pred CCEEEeehhhhcCCC-cCeEEEEehHHHhhcCCcc---cCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccch
Confidence 467778889988974 99 9999999887643321 00100000112357899999999999999998877
Q ss_pred ------ChHHHHHHHHHHHHHHHHHHhccCCcccccCC--C-C--------CcccHHHHHHHHHccCccccCC-------
Q psy8733 521 ------GLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQ--A-G--------FPLDELFLKEAKAHNMIQLKGH------- 576 (621)
Q Consensus 521 ------g~~~~~~~~~~ka~~lY~~id~~~~~~~~~v~--~-~--------~~~~~~~~~~~~~~~i~~~~g~------- 576 (621)
+++.+.++.++..+.+++.|++.+++ ..... . . .....+|.+.++++||....|+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~g~~~~~~~~ 372 (406)
T 3cai_A 294 RERLAVSMQSADAYLNRVFDYLMVSLRSLPLV-MLIGRPEAQIPVVSFAVHKVPADRVVQRLADNGILAIANTGSRVLDV 372 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTE-EECCCCSSBCSEEEEEETTBCHHHHHHHHHHTTEECEECCSCHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHhcCCCe-EEcCCccccCCEEEEEECCcCHHHHHHHHHHCCcEEecCChHHHHHH
Confidence 48899999999999999999886553 11111 0 0 0123458888889999877665
Q ss_pred -C---CCCccceeeccCCCHHHHHHHHHHHHH
Q psy8733 577 -R---LVGGIRASIYNAITVDEAVILVKFMKE 604 (621)
Q Consensus 577 -~---~~~~~r~~~~~a~~~~~~~~l~~~~~~ 604 (621)
+ ..+.||++.-..++.|+++.+++.|++
T Consensus 373 ~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 373 LGVNDVGGAVTVGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp HTTTTTTCCEEEECCTTCCHHHHHHHHHHHHT
T ss_pred cCCCCCCCeEEEEeecCCCHHHHHHHHHHHHH
Confidence 2 246799999999999999999998875
No 277
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=90.69 E-value=0.36 Score=50.79 Aligned_cols=138 Identities=14% Similarity=0.143 Sum_probs=84.0
Q ss_pred HhhcccccccCC--cEEeee---cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHH--Hh--cCChH
Q psy8733 453 IAGAQKNIGPAG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWI--KR--QGGLA 523 (621)
Q Consensus 453 ~a~~qk~~GpaG--l~v~iv---~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~--~~--~gg~~ 523 (621)
..|.-|.+|++| ++.+++ +++++++... .++. ...+++.+||.++.+++...|+.- ++ ...++
T Consensus 264 ~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 335 (420)
T 4f4e_A 264 SSSFSKSFSLYGERVGALSIITDSKDEAARVLS------QLKR--VIRTNYSNPPTHGGAIVAAVLASPELRASWVQELG 335 (420)
T ss_dssp EEECTTTTTCGGGCEEEEEEECSSHHHHHHHHH------HHHH--HHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred EEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHH------HHHH--HHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 455669999888 555543 4555543110 0111 113466778888888777666531 11 12367
Q ss_pred HHHHHHHHHHHHHHHHHhcc---CCcccccCCCC----CcccH-HHHHHHHHccCccccCCCCCCccceeeccCCCHHHH
Q psy8733 524 KMEQNSLQKSVLLYQEIDNS---DKFYECPVQAG----FPLDE-LFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEA 595 (621)
Q Consensus 524 ~~~~~~~~ka~~lY~~id~~---~~~~~~~v~~~----~~~~~-~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~ 595 (621)
.+.++-+++.+.+++.+++. .++-..+.+.+ ..++. .+.+.++++||....| .|++ |-.++.+++
T Consensus 336 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~gI~v~~~------~Ris-~~~~~~~~i 408 (420)
T 4f4e_A 336 EMRDRIRAMRNGLVERLKAAGIERDFSFINAQRGMFSYSGLTSAQVDRLREEFGIYAVST------GRIC-VAALNTRNL 408 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSSCCTHHHHSCSSEEECCCCHHHHHHHHHHHCEECCTT------SEEE-GGGCCTTTH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCceeECCCccEEEEeCCCHHHHHHHHHhCCEEecCC------CeEE-EecCCHHHH
Confidence 88888999999999999875 22211000111 12333 3567778889987654 3886 456788999
Q ss_pred HHHHHHHHHH
Q psy8733 596 VILVKFMKEF 605 (621)
Q Consensus 596 ~~l~~~~~~~ 605 (621)
+.+++-|++.
T Consensus 409 ~~~~~~l~~~ 418 (420)
T 4f4e_A 409 DVVANAIAAV 418 (420)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988765
No 278
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=89.60 E-value=0.78 Score=48.94 Aligned_cols=108 Identities=10% Similarity=0.085 Sum_probs=70.9
Q ss_pred CccCCCchhHHHHHHHHHHHHH---h-cCChHHHHHHHHHHHHHHHHHHhcc--CC-----cccccC-CCC----CcccH
Q psy8733 496 SVYNTPPTFVVHVIQRVFAWIK---R-QGGLAKMEQNSLQKSVLLYQEIDNS--DK-----FYECPV-QAG----FPLDE 559 (621)
Q Consensus 496 s~~nTP~~~~iy~~~~vl~~~~---~-~gg~~~~~~~~~~ka~~lY~~id~~--~~-----~~~~~v-~~~----~~~~~ 559 (621)
+++.+||.++.+++...|+.-. + .-.++.+.++.+++.+.+++.+.+. ++ -+.... +.+ ..+..
T Consensus 320 ~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 399 (448)
T 3meb_A 320 KTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLTP 399 (448)
T ss_dssp TTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCTHHHHCCSSEEECCCCH
T ss_pred cccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccceeCCCceEEEecCCCH
Confidence 5677888888888877764210 0 0136788888899999999999875 33 011111 111 12445
Q ss_pred HHHHHH-HHccCccccCCCCCCccceeeccCCCHHHHHHHHHHHHHHHHHc
Q psy8733 560 LFLKEA-KAHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 560 ~~~~~~-~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~~ 609 (621)
++...+ +++||....|- .|++. -.++.++++.+++-|++..++.
T Consensus 400 ~~~~~ll~~~gV~v~~G~-----gRis~-a~~~~~~i~~~~~~l~~~l~~~ 444 (448)
T 3meb_A 400 EHVDYLKEKWSIYLVKAG-----GRMSM-CGLTESNCDYVAEAIHDAVTKL 444 (448)
T ss_dssp HHHHHHHHHHCEEECSGG-----GEEEG-GGCCTTTHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCEEEeCCC-----cEEEE-ecCCHHHHHHHHHHHHHHHHhc
Confidence 655544 77899877664 38864 5568888999999998887643
No 279
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=89.13 E-value=0.46 Score=49.39 Aligned_cols=159 Identities=14% Similarity=0.141 Sum_probs=110.7
Q ss_pred HHHHHhhccccc-ccCCc-EEeeecHhHhhhcCCCCCce------e----eeeec-ccCCCccCCCchhHHHHHHHHHHH
Q psy8733 449 FGVIIAGAQKNI-GPAGI-TVVIVREDLLEYALPITPTV------F----HFKIN-ADNNSVYNTPPTFVVHVIQRVFAW 515 (621)
Q Consensus 449 ~~~~~a~~qk~~-GpaGl-~v~iv~~~~l~~~~~~~p~~------~----~y~~~-~~~~s~~nTP~~~~iy~~~~vl~~ 515 (621)
.|++..|.+|.+ |+.|+ ++++++++++++..+..... + +|... ......+.|||...++.+...+++
T Consensus 218 ~d~~~~s~~K~l~~g~~~~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 297 (416)
T 1qz9_A 218 ADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDV 297 (416)
T ss_dssp CSEEEECSSSTTCCCTTCCCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHH
T ss_pred CCEEEecCcccCCCCCCCeEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHH
Confidence 467788999997 46677 99999999876644321110 0 01100 011234678999999999999998
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHHhcc-C--Ccccc-cCC---CCC----c--ccHHHHHHHHHccCccccCCCCCCcc
Q psy8733 516 IKRQGGLAKMEQNSLQKSVLLYQEIDNS-D--KFYEC-PVQ---AGF----P--LDELFLKEAKAHNMIQLKGHRLVGGI 582 (621)
Q Consensus 516 ~~~~gg~~~~~~~~~~ka~~lY~~id~~-~--~~~~~-~v~---~~~----~--~~~~~~~~~~~~~i~~~~g~~~~~~~ 582 (621)
+.+. |++.+.++.+++.+.+++.|++. + ++-.. +.. ... + -...|.+.+.++||... ++..+.|
T Consensus 298 ~~~~-~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~--~~~~~~l 374 (416)
T 1qz9_A 298 FAQT-DMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHPEGYAVIQALIDRGVIGD--YREPRIM 374 (416)
T ss_dssp HTTS-CHHHHHHHHHHHHHHHHHHHHHHHTTSCCEECSCSSGGGBCSEEEEECTTHHHHHHHHHTTTEECE--EETTTEE
T ss_pred HHhc-CHHHHHHHHHHHHHHHHHHHHhhccCCCeEEeCCCCHHHcCCEEEEecCCHHHHHHHHHhCCcEec--cCCCCeE
Confidence 7643 69999999999999999999875 3 43111 110 010 1 14568888999998753 2346779
Q ss_pred ceeecc-CCCHHHHHHHHHHHHHHHHHcC
Q psy8733 583 RASIYN-AITVDEAVILVKFMKEFRHKHS 610 (621)
Q Consensus 583 r~~~~~-a~~~~~~~~l~~~~~~~~~~~~ 610 (621)
|++.-+ .++.||++.+++.|+++.++..
T Consensus 375 Ris~~~~~~t~~~i~~~~~~l~~~~~~~~ 403 (416)
T 1qz9_A 375 RFGFTPLYTTFTEVWDAVQILGEILDRKT 403 (416)
T ss_dssp EEECCTTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred EEeCcccCCCHHHHHHHHHHHHHHHhccc
Confidence 999874 8999999999999999877644
No 280
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=87.71 E-value=0.49 Score=48.88 Aligned_cols=145 Identities=12% Similarity=0.106 Sum_probs=102.8
Q ss_pred HHHHHhhcccccc-cCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 449 FGVIIAGAQKNIG-PAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
.|++..|..|.+| |.| ++++.+++++++..+ ......++||+...+..+...++++.+ .+++.+.+
T Consensus 217 ~di~~~s~sK~~~g~~g-G~~~~~~~~~~~l~~-----------~~~~~~~~~~~~~~~aa~~~al~~~~~-~~~~~~~~ 283 (405)
T 2vi8_A 217 AHFVTTTTHKTLRGPRG-GMILCQEQFAKQIDK-----------AIFPGIQGGPLMHVIAAKAVAFGEALQ-DDFKAYAK 283 (405)
T ss_dssp CSEEEEESSSTTCCCSC-EEEEECHHHHHHHHH-----------HHTTTTCSSCCHHHHHHHHHHHHHHHS-HHHHHHHH
T ss_pred CCEEEEeccccCCCCCC-eEEEEcHHHHHHHHh-----------hhcccccCCCCHHHHHHHHHHHHHHHh-hhHHHHHH
Confidence 4667788899997 999 999999988765321 111234678888888888888887764 36888999
Q ss_pred HHHHHHHHHHHHHhccCCcccc-cCCCC--------C-c-ccHHHHHHHHHccCccccCC------C--CCCccceeecc
Q psy8733 528 NSLQKSVLLYQEIDNSDKFYEC-PVQAG--------F-P-LDELFLKEAKAHNMIQLKGH------R--LVGGIRASIYN 588 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~~~~~~~-~v~~~--------~-~-~~~~~~~~~~~~~i~~~~g~------~--~~~~~r~~~~~ 588 (621)
+.+++.+.+++.+++. ++-.. +-... . . ....+.+.++++||....|+ . ..+.+|++.=.
T Consensus 284 ~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~ 362 (405)
T 2vi8_A 284 RVVDNAKRLASALQNE-GFTLVSGGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPYDPESPFVTSGIRIGTAA 362 (405)
T ss_dssp HHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTTCSSCTTTCSEEEEECHH
T ss_pred HHHHHHHHHHHHHHhC-CCeEecCCCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCccccCCCCCCCceEEeeee
Confidence 9999999999999865 32110 10010 0 1 23457888899999877664 1 24569998432
Q ss_pred ----CCCHHHHHHHHHHHHHHHH
Q psy8733 589 ----AITVDEAVILVKFMKEFRH 607 (621)
Q Consensus 589 ----a~~~~~~~~l~~~~~~~~~ 607 (621)
.++.||++.+++.|+++.+
T Consensus 363 ~~~~~~~~~~i~~~~~~l~~~~~ 385 (405)
T 2vi8_A 363 VTTRGFGLEEMDEIAAIIGLVLK 385 (405)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHT
T ss_pred eeecCCCHHHHHHHHHHHHHHHh
Confidence 6899999999999998764
No 281
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=87.28 E-value=3.5 Score=43.32 Aligned_cols=137 Identities=9% Similarity=0.001 Sum_probs=84.2
Q ss_pred hccccccc-CCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q psy8733 455 GAQKNIGP-AGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKS 533 (621)
Q Consensus 455 ~~qk~~Gp-aGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~~~ka 533 (621)
+..|.+|+ -.++.++.++++++...+..+ ....++|+ +|.++...+-.+|+.+.+ . .+.++.+++.
T Consensus 268 s~sK~l~~G~~~G~v~~~~~~~~~l~~~~~--------~~~~~t~~-~~~~~~aa~~a~l~~~~~-~---~~~~~~~~~~ 334 (434)
T 2epj_A 268 VLGKIIGGGFPVGAVAGSREVMSLLTPQGK--------VFNAGTFN-AHPITMAAGLATLKALEE-E---PVYSVSREAA 334 (434)
T ss_dssp EEEGGGGTTSSCEEEEECHHHHTTBTTTSS--------BCCCCTTT-TCHHHHHHHHHHHHHHHH-S---CHHHHHHHHH
T ss_pred eecchhcCCcceeeeeecHHHHHhhccCCC--------cccCCCCC-cCHHHHHHHHHHHHHHHh-c---CHHHHHHHHH
Confidence 45688875 136788899998865432100 11234443 566778888888998876 3 2445566666
Q ss_pred HHHHHHHhcc----C---------CcccccCCCC-----------C-cccHHHHHHHHHccCccccCCCCCCccceeecc
Q psy8733 534 VLLYQEIDNS----D---------KFYECPVQAG-----------F-PLDELFLKEAKAHNMIQLKGHRLVGGIRASIYN 588 (621)
Q Consensus 534 ~~lY~~id~~----~---------~~~~~~v~~~-----------~-~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~ 588 (621)
+.+.+.+++- + .|+...+.+. + .....|.+.+.++||....|.. +.+|++ -
T Consensus 335 ~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~~~--~ 410 (434)
T 2epj_A 335 KALEEAASEVLDRTGLPYTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRGVFIAPSNL--EAVFTG--L 410 (434)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTTEECCSSTT--SCEECC--T
T ss_pred HHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCCeEEeccCC--CcEEEe--c
Confidence 6666666542 1 1111111110 0 1234588889999998765532 346665 4
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q psy8733 589 AITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 589 a~~~~~~~~l~~~~~~~~~~ 608 (621)
.++.||++.+++.|+++.++
T Consensus 411 ~~t~e~i~~~l~~l~~~l~~ 430 (434)
T 2epj_A 411 PHQGEALEIAVEGLRSSLKT 430 (434)
T ss_dssp TCSHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHH
Confidence 78999999999999887654
No 282
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=86.16 E-value=0.93 Score=48.26 Aligned_cols=144 Identities=13% Similarity=0.104 Sum_probs=86.4
Q ss_pred HHHHhhcccccccCC--cEEeee-cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHh--------
Q psy8733 450 GVIIAGAQKNIGPAG--ITVVIV-REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKR-------- 518 (621)
Q Consensus 450 ~~~~a~~qk~~GpaG--l~v~iv-~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~-------- 518 (621)
+++..|.=|.+|++| ++.++. +++++++..+ ++ .. +..++|.++-+++-..|+...+
T Consensus 243 ~i~~~S~SK~~g~~G~RiG~~~~~~~~l~~~l~~-------~~----~~-~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~ 310 (427)
T 2hox_A 243 DILLFTMSKFTGHSGSRFGWALIKDESVYNNLLN-------YM----TK-NTEGTPRETQLRSLKVLKEVVAMVKTQKGT 310 (427)
T ss_dssp SEEEEEHHHHTSCGGGCCEEEEECCHHHHHHHHH-------HH----HH-HTSSCCHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred eEEEEeChhcCCCCCceEEEEEECCHHHHHHHHH-------HH----Hh-cCCCCCHHHHHHHHHHhhcchhhhccccch
Confidence 445566778999888 788898 4888766321 11 11 2234556665555555543211
Q ss_pred -cCChHHHHHHHHHHHHHHHHHHhccCCccc---c-cC--------CC--CC----cc---cHHHHHH-HHHccCccccC
Q psy8733 519 -QGGLAKMEQNSLQKSVLLYQEIDNSDKFYE---C-PV--------QA--GF----PL---DELFLKE-AKAHNMIQLKG 575 (621)
Q Consensus 519 -~gg~~~~~~~~~~ka~~lY~~id~~~~~~~---~-~v--------~~--~~----~~---~~~~~~~-~~~~~i~~~~g 575 (621)
..=++.+.++.+++.+.+.+.|++.+++-. . |- .+ +. ++ ..++.+. ++++||....|
T Consensus 311 ~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~ll~~~gI~v~pg 390 (427)
T 2hox_A 311 MRDLNTFGFKKLRERWVNITALLDQSDRFSYQELPQSEYCNYFRRMRPPSPSYAWVKCEWEEDKDCYQTFQNGRINTQNG 390 (427)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHTTSSSEECCCCCSCEEETTTTEEECCCCSEEEEEECSGGGCSHHHHHHHTTEECEEG
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCcCccccccccccccccccccCCCCceEEEEECCCcHHHHHHHHHHHCCEEEcCC
Confidence 111345567778889999999988644311 0 00 00 00 11 2335555 46889986544
Q ss_pred --CCC-CCccceeeccCCCHHHHHHHHHHHHHHHH
Q psy8733 576 --HRL-VGGIRASIYNAITVDEAVILVKFMKEFRH 607 (621)
Q Consensus 576 --~~~-~~~~r~~~~~a~~~~~~~~l~~~~~~~~~ 607 (621)
|+. .+.||++.-. +.|+++..++-|+++.+
T Consensus 391 ~~f~~~~~~~Ris~~~--~~e~l~~~l~~l~~~~~ 423 (427)
T 2hox_A 391 VGFEASSRYVRLSLIK--TQDDFDQLMYYLKDMVK 423 (427)
T ss_dssp GGGTSCTTEEEEECSS--CHHHHHHHHHHHHHHHT
T ss_pred CccCCCCCEEEEEecC--CHHHHHHHHHHHHHHHh
Confidence 444 5669999874 88888888888887764
No 283
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=83.18 E-value=1.6 Score=44.27 Aligned_cols=136 Identities=11% Similarity=0.039 Sum_probs=75.7
Q ss_pred HHHHhhccccc-ccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 450 GVIIAGAQKNI-GPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 450 ~~~~a~~qk~~-GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
|++..+..|.+ ||.| ++++.+++++++..+ ++. ..+...++++.+....+ ..|+.. ++.+++
T Consensus 198 d~~~~s~sK~~~~~~g-g~~~~~~~~~~~~~~-------~~~--~~~~~~~~~~~~~~~~~-~~l~~~-----~~~~~~- 260 (357)
T 3lws_A 198 DSIYISFYKGLGGIAG-AILAGPAAFCQTARI-------WKR--RYGGDLISLYPYIVSAD-YYYELR-----KDRMGQ- 260 (357)
T ss_dssp SEEEEESSSTTCCSSC-EEEEECHHHHHHHHH-------HHH--HTTCCCSCCHHHHHHHH-HHHHHH-----TTCHHH-
T ss_pred CEEEEeccccCCCCce-EEEEcCHHHHHHHHH-------HHH--HhcCCcccchHHHHHHH-HHHHHH-----HHHHHH-
Confidence 44456778999 6999 888999998876421 111 11122333343332222 122211 222333
Q ss_pred HHHHHHHHHHHHhccCCcccc-cCCC-C--------Cc---ccHHHHHHHHHccCccccCCCC-CC--ccceeeccC---
Q psy8733 529 SLQKSVLLYQEIDNSDKFYEC-PVQA-G--------FP---LDELFLKEAKAHNMIQLKGHRL-VG--GIRASIYNA--- 589 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~-~v~~-~--------~~---~~~~~~~~~~~~~i~~~~g~~~-~~--~~r~~~~~a--- 589 (621)
..++++.+++.+.+.+++ .. +..+ + .. ....+.+.++++||....|... .| .+|+++=..
T Consensus 261 ~~~~~~~l~~~L~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~g~~~~~~~~~~r~~i~~~~~~ 339 (357)
T 3lws_A 261 YYEQAKQLAEQFNALPGV-HTTPEVPVSNMFHLHFDGQAADISPKLEQVQEETGLGFVGYLVDKDGYCSTEISVGDAYGE 339 (357)
T ss_dssp HHHHHHHHHHHHHTSTTE-EEESSSCSSSEEEEEEESCHHHHHHHHHHHHHHHCEESCSCCEECSSEEEEEEEBCTTGGG
T ss_pred HHHHHHHHHHHHHhCCCC-eeccCCCcceEEEEEecCChHHHHHHHHHHHHhcCeEEecccccCCCceEEEEEecchhhh
Confidence 356678899999887653 22 1111 1 01 1345788999999998777532 23 588876544
Q ss_pred CCHHHHHHHHHHHH
Q psy8733 590 ITVDEAVILVKFMK 603 (621)
Q Consensus 590 ~~~~~~~~l~~~~~ 603 (621)
.+.|++++.++-|+
T Consensus 340 ~~~~~l~~al~~l~ 353 (357)
T 3lws_A 340 LDQQTRDAGFARLR 353 (357)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHH
Confidence 46666555555444
No 284
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=82.23 E-value=1.7 Score=45.12 Aligned_cols=100 Identities=16% Similarity=0.245 Sum_probs=64.7
Q ss_pred CccCCCchhHHHHHHHHHH-------HHHhcCChHHHHHHHHHHHHHHHHHHhccC--CcccccC-CCC----CcccHHH
Q psy8733 496 SVYNTPPTFVVHVIQRVFA-------WIKRQGGLAKMEQNSLQKSVLLYQEIDNSD--KFYECPV-QAG----FPLDELF 561 (621)
Q Consensus 496 s~~nTP~~~~iy~~~~vl~-------~~~~~gg~~~~~~~~~~ka~~lY~~id~~~--~~~~~~v-~~~----~~~~~~~ 561 (621)
+++.+||.++.+++...|+ |.. .++.+.++-+++.+.+++.+.+.. +-+.... +.+ ..+..++
T Consensus 293 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 369 (409)
T 4eu1_A 293 PMYNNPPLYGAWVVSSILKDPQLTALWKK---ELKQMSSRIAEVRKRLVSELKACGSVHDWSHIERQVGMMAYTGLTREQ 369 (409)
T ss_dssp HHHSSCCHHHHHHHHHHHHCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHSCSSEEECCCCHHH
T ss_pred hhcCCCChHHHHHHHHHhCCHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCCcceecCCceEEEEeCCCHHH
Confidence 4456778888888887776 443 367788888899999999987652 0011100 111 1233454
Q ss_pred H-HHHHHccCccccCCCCCCccceeeccCCCHHHHHHHHHHHHHH
Q psy8733 562 L-KEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKFMKEF 605 (621)
Q Consensus 562 ~-~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~~~~~~~ 605 (621)
. +.++++||....| .|++. -.++.++++.+++-|++.
T Consensus 370 ~~~ll~~~gv~v~p~------~Ri~~-~~~~~~~i~~~~~~l~~~ 407 (409)
T 4eu1_A 370 VELLRSEYHIYMTLN------GRAAV-SGLNSTNVEYVSQAIHNV 407 (409)
T ss_dssp HHHHHHHHCEECCTT------CEEEG-GGCCTTTHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEcCC------CEEEE-EecCHhhHHHHHHHHHHH
Confidence 4 4445779987664 46643 567888899999988765
No 285
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=82.45 E-value=0.29 Score=50.84 Aligned_cols=140 Identities=9% Similarity=0.000 Sum_probs=83.3
Q ss_pred HHHhhcccccccCC--cEEeeecHh-HhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVRED-LLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~-~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
++..|.-|.+|.+| ++.++.+++ +++... . .....++.+||.++.+.+-..|+.. ...++.+.+
T Consensus 231 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~ 297 (392)
T 3b1d_A 231 LVLSSATKTFNIAGTKNSYAIIENPTLCAQFK----------H-QQLVNNHHEVSSLGYIATETAYRYG--KPWLVALKA 297 (392)
Confidence 45567788998666 466777643 655421 1 1222234567777777666666532 235677788
Q ss_pred HHHHHHHHHHHHHhc-cCCc---------cc-ccCCCCCcccHHHHHHHH-HccCccccCC--C--CCCccceeeccCCC
Q psy8733 528 NSLQKSVLLYQEIDN-SDKF---------YE-CPVQAGFPLDELFLKEAK-AHNMIQLKGH--R--LVGGIRASIYNAIT 591 (621)
Q Consensus 528 ~~~~ka~~lY~~id~-~~~~---------~~-~~v~~~~~~~~~~~~~~~-~~~i~~~~g~--~--~~~~~r~~~~~a~~ 591 (621)
+.+++.+.+.+.+++ .+++ +. ..+.+.......|.+.+. ++||....|. + ..+.||++ | +.+
T Consensus 298 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~-~-~~~ 375 (392)
T 3b1d_A 298 VLEENIQFAVEYFAQEAPRLKVMKPQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYGSEGELHARLN-I-AAP 375 (392)
Confidence 888888888888876 3332 21 111100012234677774 7899876553 3 24569999 3 346
Q ss_pred HHHHHHHHHHHHHH
Q psy8733 592 VDEAVILVKFMKEF 605 (621)
Q Consensus 592 ~~~~~~l~~~~~~~ 605 (621)
.|+++..++-|++.
T Consensus 376 ~e~i~~~l~~l~~~ 389 (392)
T 3b1d_A 376 KSLVEEICKRIVCC 389 (392)
Confidence 78888777776654
No 286
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=81.33 E-value=2 Score=44.87 Aligned_cols=150 Identities=17% Similarity=0.158 Sum_probs=96.7
Q ss_pred HHHHHhhcccccccCCcEEeeecHhH-hhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 449 FGVIIAGAQKNIGPAGITVVIVREDL-LEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~v~iv~~~~-l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
.|++..|.+|.+||- ++++++++++ +.+ ..|..+.... . ......|+|.+.++.+...++++.+ +++.+.+
T Consensus 238 ~d~~~~s~~K~~g~~-~G~~~~~~~~~~~~---~~~~~~~~~~-~-~~~~~~~~~~~~~~a~~aal~~~~~--~~~~~~~ 309 (432)
T 3a9z_A 238 VDFLTIVGHKFYGPR-IGALYVRGVGKLTP---LYPMLFGGGQ-E-RNFRPGTENTPMIAGLGKAADLVSE--NCETYEA 309 (432)
T ss_dssp CSEEEEEGGGTTCCS-CEEEEETTBTTTBC---CCCSCCSSCG-G-GGTSCSCCCHHHHHHHHHHHHHHHH--HHHHHHH
T ss_pred CCEEEEehhHhcCCc-ceEEEEccccccCC---cCceeecCCc-c-ccccCCCcCHHHHHHHHHHHHHHHh--hHHHHHH
Confidence 466778889999986 9999999876 222 2222221110 1 1223468999999999999998875 6899999
Q ss_pred HHHHHHHHHHHHHhccCCc-cc--cc-----CCC--------CCcc-cHHHHHHHHHccCccccC------C--------
Q psy8733 528 NSLQKSVLLYQEIDNSDKF-YE--CP-----VQA--------GFPL-DELFLKEAKAHNMIQLKG------H-------- 576 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~~~~-~~--~~-----v~~--------~~~~-~~~~~~~~~~~~i~~~~g------~-------- 576 (621)
+.+++++.+++.|++.+++ +. .+ ... .... ...+.+.+ +++..-.| |
T Consensus 310 ~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~i~~~~G~~~~~~~~~~~~~~l 387 (432)
T 3a9z_A 310 HMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQC--QTLLASVGASCHSDHEDRPSPVL 387 (432)
T ss_dssp HHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTTCCHHHHHHHC--SSEECBSSCGGGGGGTTSCCHHH
T ss_pred HHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCCCcHHHHHHHh--cCeEEeccccccCCCCCCccHHH
Confidence 9999999999999774322 00 11 000 0011 22344433 23332111 1
Q ss_pred ---CC-----CCccceeeccCCCHHHHHHHHHHHHHHHHH
Q psy8733 577 ---RL-----VGGIRASIYNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 577 ---~~-----~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
+. .+.||++.-..++.||++.+++.|+++.++
T Consensus 388 ~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~ 427 (432)
T 3a9z_A 388 LSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQ 427 (432)
T ss_dssp HHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 21 367999998888999999999999988654
No 287
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=80.92 E-value=1.6 Score=45.13 Aligned_cols=134 Identities=16% Similarity=0.232 Sum_probs=75.3
Q ss_pred hhcccccccCC--cEEeee---cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHH-------HHHhcCC
Q psy8733 454 AGAQKNIGPAG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFA-------WIKRQGG 521 (621)
Q Consensus 454 a~~qk~~GpaG--l~v~iv---~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~-------~~~~~gg 521 (621)
.|.=|.+|++| ++.+++ ++...+.... . .+. . ..+++..|+.++-.++...++ |.. -
T Consensus 246 ~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~---~---~~~-~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~ 314 (401)
T 7aat_A 246 QSYAKNMGLYGERAGAFTVICRDAEEAKRVES---Q---LKI-L-IRPMYSNPPMNGARIASLILNTPELRKEWLV---E 314 (401)
T ss_dssp EECTTTSCCGGGCEEEEEEECSSHHHHHHHHH---H---HHH-H-HHHHHSSCCHHHHHHHHHHHHCHHHHHHHHH---H
T ss_pred ecCCcccccccCceEEEEEEeCCHHHHHHHHH---H---HHH-H-HHhccCCCChHHHHHHHHHhCCHHHHHHHHH---H
Confidence 55668899888 566665 4443211000 0 011 1 123344566666666655442 222 2
Q ss_pred hHHHHHHHHHHHHHHHHHHhccC--CcccccC-CCC----CcccHHHHH-HHHHccCccccCCCCCCccceeeccCCCHH
Q psy8733 522 LAKMEQNSLQKSVLLYQEIDNSD--KFYECPV-QAG----FPLDELFLK-EAKAHNMIQLKGHRLVGGIRASIYNAITVD 593 (621)
Q Consensus 522 ~~~~~~~~~~ka~~lY~~id~~~--~~~~~~v-~~~----~~~~~~~~~-~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~ 593 (621)
++.+.++.+++.+.+++.|.+.. +-+.... +.+ ..+..+++. .++++||.... ++|++. -.++.+
T Consensus 315 ~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~------~~Ris~-~~~~~~ 387 (401)
T 7aat_A 315 VKGMADRIISMRTQLVSNLKKEGSSHNWQHITDQIGMFCFTGLKPEQVERLTKEFSIYMTK------DGRISV-AGVASS 387 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCSCCHHHHHCCSSEEECCCCHHHHHHHHHHHCEECCT------TCEEEG-GGCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCCceecCCcceEEecCCCHHHHHHHHHhCCEeccC------CCeEEe-ccCChh
Confidence 56777888888899999887642 0011100 000 123345444 44778988753 478875 457777
Q ss_pred HHHHHHHHHHHH
Q psy8733 594 EAVILVKFMKEF 605 (621)
Q Consensus 594 ~~~~l~~~~~~~ 605 (621)
+++.+++-|++.
T Consensus 388 ~i~~~~~~l~~~ 399 (401)
T 7aat_A 388 NVGYLAHAIHQV 399 (401)
T ss_dssp THHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 899999988764
No 288
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=80.81 E-value=12 Score=39.12 Aligned_cols=135 Identities=9% Similarity=0.026 Sum_probs=84.3
Q ss_pred hccccccc-CCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q psy8733 455 GAQKNIGP-AGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKS 533 (621)
Q Consensus 455 ~~qk~~Gp-aGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~~~ka 533 (621)
+-.|.+|+ -.++.++.++++++...+..+ ....++|+ +|.++...+-.+|+.+.+ .+.+.++.+++.
T Consensus 263 s~sK~l~~G~~~G~~~~~~~~~~~~~~~~~--------~~~~~t~~-~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~ 330 (424)
T 2e7u_A 263 TLGKILGGGLPAAAYAGRREIMEKVAPLGP--------VYQAGTLS-GNPLAMAAGLATLELLEE---NPGYYAYLEDLG 330 (424)
T ss_dssp EECGGGGTTSSCEEEEECHHHHTTBTTTSS--------BCCCCTTC-SCHHHHHHHHHHHHHHHH---CTHHHHHHHHHH
T ss_pred hhhhhhhCCcceEEEEEcHHHHhhhcccCC--------cccCCCCC-CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHH
Confidence 44688874 146788999998876432100 11234444 556677778888888875 255667777777
Q ss_pred HHHHHHHhcc----C---------CcccccCCCC-----------C-cccHHHHHHHHHccCccccCCCCCCccceeecc
Q psy8733 534 VLLYQEIDNS----D---------KFYECPVQAG-----------F-PLDELFLKEAKAHNMIQLKGHRLVGGIRASIYN 588 (621)
Q Consensus 534 ~~lY~~id~~----~---------~~~~~~v~~~-----------~-~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~ 588 (621)
+.+.+.+++- + .|+...+.+. + .....|.+.+.++|+....|.. +.+|++ -
T Consensus 331 ~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--~~~~~~--~ 406 (424)
T 2e7u_A 331 ARLEAGLKEVLKEKGLPHTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDRGIYWPPSNF--EAAFLS--V 406 (424)
T ss_dssp HHHHHHHHHHHHHTTCCCEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTTTEECCSSSS--SCEECC--T
T ss_pred HHHHHHHHHHHHhCCCceEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHCCeEEeccCC--CceEee--c
Confidence 8887777652 2 1111111110 0 1234588888899998766532 347766 4
Q ss_pred CCCHHHHHHHHHHHHHH
Q psy8733 589 AITVDEAVILVKFMKEF 605 (621)
Q Consensus 589 a~~~~~~~~l~~~~~~~ 605 (621)
+++.|+++++++.|++.
T Consensus 407 ~~t~~~i~~~l~~l~~~ 423 (424)
T 2e7u_A 407 AHREEDVEKTLEALRKA 423 (424)
T ss_dssp TCCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHh
Confidence 79999999999988763
No 289
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=80.62 E-value=1.1 Score=46.67 Aligned_cols=139 Identities=9% Similarity=0.063 Sum_probs=80.8
Q ss_pred HHHHHhhcccccc-cCC--cEEeeecHhHhh-hcCCCCCceeeeeecccCCCc-cCCCchhHHHHHHHHHHHHHhcCChH
Q psy8733 449 FGVIIAGAQKNIG-PAG--ITVVIVREDLLE-YALPITPTVFHFKINADNNSV-YNTPPTFVVHVIQRVFAWIKRQGGLA 523 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paG--l~v~iv~~~~l~-~~~~~~p~~~~y~~~~~~~s~-~nTP~~~~iy~~~~vl~~~~~~gg~~ 523 (621)
.|++..|..|.+| |.+ .++++.++++++ ...+ +.. .+ ..|+|.+..+++...|+.+.
T Consensus 201 ~di~~~s~sK~~~~~g~~~~G~~~~~~~~~~~~~~~-------~~~-----~~~~~~~~~~~~~~~~~~l~~~~------ 262 (398)
T 2rfv_A 201 ADIVVHSVTKYINGHGDVIGGIIVGKQEFIDQARFV-------GLK-----DITGGCMSPFNAWLTLRGVKTLG------ 262 (398)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHT-------HHH-----HTTCCCCCHHHHHHHHHHHTTHH------
T ss_pred CcEEEEeCcccccCCCCceEEEEEECHHHHHHHHHH-------HHH-----hCCCCCCCHHHHHHHHhhhhhHH------
Confidence 4677789999997 555 489999999886 3211 111 11 24677788888777775332
Q ss_pred HHHHHHHHHHHHHHHHHhccC---------------------------CcccccCCCCCcccHHHHHHHHHccCccccCC
Q psy8733 524 KMEQNSLQKSVLLYQEIDNSD---------------------------KFYECPVQAGFPLDELFLKEAKAHNMIQLKGH 576 (621)
Q Consensus 524 ~~~~~~~~ka~~lY~~id~~~---------------------------~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~g~ 576 (621)
...++..+.++.+-+++.+.+ +++...+....+....|++.++.+|+..-.|.
T Consensus 263 ~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~G~ 342 (398)
T 2rfv_A 263 IRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEAGRRMINSVELCLLAVSLGD 342 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHTTCSSSEECSCCSS
T ss_pred HHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHHHHHHHHhCCcceeccCCCC
Confidence 222233445666667776532 11211111000012224444444455533331
Q ss_pred ------------------------C-CCCccceeeccCCCHHHHHHHHHHHHHH
Q psy8733 577 ------------------------R-LVGGIRASIYNAITVDEAVILVKFMKEF 605 (621)
Q Consensus 577 ------------------------~-~~~~~r~~~~~a~~~~~~~~l~~~~~~~ 605 (621)
+ ..+.||++.=...+.|+++.|++.|++.
T Consensus 343 ~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 343 TETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp SSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred cceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 1 1467999999999999999999988753
No 290
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=79.96 E-value=1.3 Score=44.97 Aligned_cols=138 Identities=12% Similarity=0.132 Sum_probs=76.5
Q ss_pred HHHHHhhcccccc-cCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 449 FGVIIAGAQKNIG-PAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
.|+++.|..|.+| |.| ++++.+++++++... ++. ..+...++++.+....+ ..++.. ++.+++
T Consensus 199 ~d~~~~s~sK~~~~~~g-g~~~~~~~l~~~~~~-------~~~--~~~~~~~~~~~~~~a~~-~~l~~~-----~~~~~~ 262 (359)
T 3pj0_A 199 FDSVYVSFYKGIGGIAG-AILAGNDDFVQEAKI-------WKR--RYGGDLISLYPYILSAD-YYFEKR-----IGKMAE 262 (359)
T ss_dssp CSEEEEESSSTTCCSSC-EEEEECHHHHHHHHH-------HHH--HTTCCCSCCHHHHHHHH-HHHHHH-----GGGHHH
T ss_pred CCEEEEeccccCCCcce-EEEECCHHHHHHHHH-------HHH--HhCCCcchhHHHHHHHH-HHHHHH-----HHHhHH
Confidence 4566668889887 666 888889998876421 111 11112223333332211 122221 334444
Q ss_pred HHHHHHHHHHHHHhccCCcccc--cCCCC-------Cc---ccHHHHHHHHHccCccccCCCC----CCccceeecc---
Q psy8733 528 NSLQKSVLLYQEIDNSDKFYEC--PVQAG-------FP---LDELFLKEAKAHNMIQLKGHRL----VGGIRASIYN--- 588 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~~~~~~~--~v~~~-------~~---~~~~~~~~~~~~~i~~~~g~~~----~~~~r~~~~~--- 588 (621)
..++.+.+++.+.+.+++-.. +.... .. ....+.+.++++||....|... .+.+|+++=.
T Consensus 263 -~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~ 341 (359)
T 3pj0_A 263 -YFEAAKGLAERFNSCSGVKTVPEVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFA 341 (359)
T ss_dssp -HHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGG
T ss_pred -HHHHHHHHHHHHhhCCCceeeccCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccc
Confidence 467778899999887654221 11111 01 1345788999999997777432 2348887643
Q ss_pred CCCHHHHHHHHHHHH
Q psy8733 589 AITVDEAVILVKFMK 603 (621)
Q Consensus 589 a~~~~~~~~l~~~~~ 603 (621)
..+.|+.+..++-|+
T Consensus 342 ~~~~e~l~~~l~~l~ 356 (359)
T 3pj0_A 342 EIPAKNLELVFRCLE 356 (359)
T ss_dssp GSCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 456666665555544
No 291
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=79.59 E-value=2.5 Score=44.78 Aligned_cols=134 Identities=16% Similarity=0.264 Sum_probs=81.9
Q ss_pred hhcccccccCCcEE--ee--e-cHhHhhhcCCCCCceeeeeeccc--CCCccCCCchhHHHHHHHHHH-------HHHhc
Q psy8733 454 AGAQKNIGPAGITV--VI--V-REDLLEYALPITPTVFHFKINAD--NNSVYNTPPTFVVHVIQRVFA-------WIKRQ 519 (621)
Q Consensus 454 a~~qk~~GpaGl~v--~i--v-~~~~l~~~~~~~p~~~~y~~~~~--~~s~~nTP~~~~iy~~~~vl~-------~~~~~ 519 (621)
.|-=|.+|.+|+-+ ++ . +++++++. ....+ ...++..||.++-.++...|+ |..
T Consensus 245 ~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~----------~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~-- 312 (405)
T 3k7y_A 245 QSFSKNMSLYGERAGALHIVCKNQEEKKIV----------FNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIK-- 312 (405)
T ss_dssp EECTTTSCCTTTTEEEEEEECSSHHHHHHH----------HHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHH--
T ss_pred eeCCccCCCccccceEEEEEeCCHHHHHHH----------HHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHH--
Confidence 34457888777643 32 2 46665431 11111 124566788888777776664 333
Q ss_pred CChHHHHHHHHHHHHHHHHHHh----ccC--CcccccCCC-C----CcccHHHHHHHHHccCccccCCCCCCccceeecc
Q psy8733 520 GGLAKMEQNSLQKSVLLYQEID----NSD--KFYECPVQA-G----FPLDELFLKEAKAHNMIQLKGHRLVGGIRASIYN 588 (621)
Q Consensus 520 gg~~~~~~~~~~ka~~lY~~id----~~~--~~~~~~v~~-~----~~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~ 588 (621)
-+..|.++-+++.+.+++.++ +.. +-+.+.... + ..+..++.+.++++|+....| | |++ |-
T Consensus 313 -~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~~~~p~gg~f~~~~l~~~~~~~L~~~gV~v~p~----~--Ris-~a 384 (405)
T 3k7y_A 313 -ELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGLFSFVPLLAKIAEHLKTHHIYIINN----G--RIN-VS 384 (405)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGGGGSSCCSSEEECGGGGGGTTTTTTTTEECCTT----S--EEE-GG
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCccccCCceEEEecCCCHHHHHHHHHCCEeecCC----C--eEE-Ee
Confidence 267788888999999999998 532 112222111 1 123345555557888876664 1 874 67
Q ss_pred CCCHHHHHHHHHHHHHHHH
Q psy8733 589 AITVDEAVILVKFMKEFRH 607 (621)
Q Consensus 589 a~~~~~~~~l~~~~~~~~~ 607 (621)
.++.++++.+++-|++..+
T Consensus 385 ~~~~~~i~~~~~~i~~~~~ 403 (405)
T 3k7y_A 385 GITKNNVDYIADKICLSLS 403 (405)
T ss_dssp GCCTTHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHh
Confidence 7888999999998888754
No 292
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=79.14 E-value=1.1 Score=45.89 Aligned_cols=142 Identities=10% Similarity=0.086 Sum_probs=98.3
Q ss_pred HHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHH
Q psy8733 450 GVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNS 529 (621)
Q Consensus 450 ~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~ 529 (621)
|++..|..|.+||.| ++++.++++++...+ .........++|.+....+...|+++.+ +.++.+.++.
T Consensus 228 di~~~s~sK~~~~~G-G~~~~~~~~~~~l~~----------~~~~~~~~~~~~~~~~~~~~~al~~~~~-~~~~~~~~~~ 295 (384)
T 1bs0_A 228 ELLVVTFGKGFGVSG-AAVLCSSTVADYLLQ----------FARHLIYSTSMPPAQAQALRASLAVIRS-DEGDARREKL 295 (384)
T ss_dssp SEEEEESSSTTSSCC-EEEEECHHHHHHHHH----------HCHHHHSSBCCCHHHHHHHHHHHHHHHS-HHHHHHHHHH
T ss_pred cEEEeeccchhhccC-cEEEeCHHHHHHHHH----------hchhhhcCCCCCHHHHHHHHHHHHHHhc-cccHHHHHHH
Confidence 456678889999999 999999998765321 1000001126888888888888888763 2457788888
Q ss_pred HHHHHHHHHHHhccCCcccccCCCC--------Cc-ccHHHHHHHHHccCccccCCCC-----CCccceeeccCCCHHHH
Q psy8733 530 LQKSVLLYQEIDNSDKFYECPVQAG--------FP-LDELFLKEAKAHNMIQLKGHRL-----VGGIRASIYNAITVDEA 595 (621)
Q Consensus 530 ~~ka~~lY~~id~~~~~~~~~v~~~--------~~-~~~~~~~~~~~~~i~~~~g~~~-----~~~~r~~~~~a~~~~~~ 595 (621)
+++.+.+.+.+++. ++ ......+ .. ...+|.+.+.++||....|... .+.+|++.-..++.|++
T Consensus 296 ~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i 373 (384)
T 1bs0_A 296 AALITRFRAGVQDL-PF-TLADSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDI 373 (384)
T ss_dssp HHHHHHHHHHHTTS-SC-EECSCCSSBCCEEEESHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHH
T ss_pred HHHHHHHHHHHHhc-CC-cccCCCCCEEEEEeCCHHHHHHHHHHHHHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHH
Confidence 99999999999875 22 1110110 01 2345888899999986655421 35699998888899999
Q ss_pred HHHHHHHHHH
Q psy8733 596 VILVKFMKEF 605 (621)
Q Consensus 596 ~~l~~~~~~~ 605 (621)
+.+++.|+++
T Consensus 374 ~~~~~~l~~~ 383 (384)
T 1bs0_A 374 DRLLEVLHGN 383 (384)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999988764
No 293
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=77.05 E-value=2.5 Score=44.36 Aligned_cols=140 Identities=13% Similarity=0.088 Sum_probs=80.7
Q ss_pred HHHHHhhcccccccCC--c-EEeeec-HhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHH
Q psy8733 449 FGVIIAGAQKNIGPAG--I-TVVIVR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAK 524 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaG--l-~v~iv~-~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~ 524 (621)
.|++..|..|-+|+.| + ++++.+ +++++...+ +.. . .-.+++.+..+++...++++. .
T Consensus 194 ~di~~~S~sK~~g~~G~rigG~~~~~~~~~~~~l~~-------~~~---~--~g~~~~~~~~~~~~~~l~~~~------~ 255 (393)
T 1n8p_A 194 ADIVVHSATKYINGHSDVVLGVLATNNKPLYERLQF-------LQN---A--IGAIPSPFDAWLTHRGLKTLH------L 255 (393)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHH-------HHH---H--HCCCCCHHHHHHHHHHHTTHH------H
T ss_pred CeEEEEECcccccCCCCceeEEEEeCCHHHHHHHHH-------HHH---h--cCCCCCHHHHHHHHhccchHH------H
Confidence 4677789999999999 7 888886 777765321 111 0 112456677777777777653 2
Q ss_pred HHHHHHHHHHHHHHHHhccCC-c---ccccC----------------C-C--------CCc-ccHHHHHHHHHccCcccc
Q psy8733 525 MEQNSLQKSVLLYQEIDNSDK-F---YECPV----------------Q-A--------GFP-LDELFLKEAKAHNMIQLK 574 (621)
Q Consensus 525 ~~~~~~~ka~~lY~~id~~~~-~---~~~~v----------------~-~--------~~~-~~~~~~~~~~~~~i~~~~ 574 (621)
.-++..+.++.+.+++.+.+. + +.+.+ . . +.. ..+.|++.++..++..--
T Consensus 256 ~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~l~~l~~~~~~~s~ 335 (393)
T 1n8p_A 256 RVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKFASSTRLFTLAESL 335 (393)
T ss_dssp HHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHHHHHCSSSEECSCC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHHHhhCCcceECCCC
Confidence 223334556677788876542 1 01100 0 1 110 122355544333322111
Q ss_pred C-------------C-----------CC-CCccceeeccCCCHHHHHHHHHHHHHHH
Q psy8733 575 G-------------H-----------RL-VGGIRASIYNAITVDEAVILVKFMKEFR 606 (621)
Q Consensus 575 g-------------~-----------~~-~~~~r~~~~~a~~~~~~~~l~~~~~~~~ 606 (621)
| | +. .|.||+|.=...+.|+++.|.+.|++..
T Consensus 336 G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~~ 392 (393)
T 1n8p_A 336 GGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQAT 392 (393)
T ss_dssp CCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHHH
T ss_pred CCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHhh
Confidence 1 2 11 3679999999999999999999998653
No 294
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=76.81 E-value=1.9 Score=44.74 Aligned_cols=141 Identities=10% Similarity=0.026 Sum_probs=76.7
Q ss_pred HHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHH
Q psy8733 450 GVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNS 529 (621)
Q Consensus 450 ~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~ 529 (621)
|++..|.+|.+|.-++++++.+++++++..+ +. ... -.+||.+..+.+-..|+.+ ..+.+++..
T Consensus 200 di~~~S~sK~l~g~~~G~~~~~~~~~~~l~~-------~~---~~~--~~~~~~~~~~a~~~al~~~----~~~~~~~~~ 263 (374)
T 2aeu_A 200 DLVVTSTDKLMEGPRGGLLAGKKELVDKIYI-------EG---TKF--GLEAQPPLLAGIYRALKNF----NLERIRKAF 263 (374)
T ss_dssp SEEEEETTSSSSSCSCEEEEEEHHHHHHHHH-------HH---HTT--TCBCCHHHHHHHHHHHHHC----CHHHHHHHH
T ss_pred cEEEecCcccccCcceEEEEECHHHHHHHHH-------hh---ccc--cCCCCHHHHHHHHHHHHHH----hHHHHHHHH
Confidence 5666788999874489999999999876421 11 111 1257778777777777654 222343333
Q ss_pred HHH-------HHHHHHHHhcc---C---------CcccccCCCCCc-cc----HHHH-HHHHHccCccccCCCC---CCc
Q psy8733 530 LQK-------SVLLYQEIDNS---D---------KFYECPVQAGFP-LD----ELFL-KEAKAHNMIQLKGHRL---VGG 581 (621)
Q Consensus 530 ~~k-------a~~lY~~id~~---~---------~~~~~~v~~~~~-~~----~~~~-~~~~~~~i~~~~g~~~---~~~ 581 (621)
+.+ .+.|.+.+..- . +|+-..++ ... .. .+|. +.++++|+....|... .+.
T Consensus 264 ~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~ 342 (374)
T 2aeu_A 264 ERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVIKRVY-KDDTINIKKLIEIGFNLLKNYGIITITVAGMPGASKS 342 (374)
T ss_dssp HHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEEEEEE-SSHHHHHHHHHHHHHHHHHHHCEECSTTSSSCSSCCS
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEEEeec-ccccccccchHHHHHHHHHhCCEEEecCCCCCCCCCe
Confidence 322 23333333321 1 11111110 001 11 1143 5567789997666432 456
Q ss_pred cceeeccC--CCHHHHHHHHHHHHHHHHH
Q psy8733 582 IRASIYNA--ITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 582 ~r~~~~~a--~~~~~~~~l~~~~~~~~~~ 608 (621)
+|++. .. .+.++++.|++.+++..++
T Consensus 343 lRi~~-~~~~~~~~~l~~l~~~l~~~l~~ 370 (374)
T 2aeu_A 343 LRIDL-TSRDAERIDDNYIIKAIVESIKM 370 (374)
T ss_dssp EEEET-TSGGGGGSCHHHHHHHHHHHHHH
T ss_pred EEEEc-CCchHHHHHHHHHHHHHHHHHHH
Confidence 99995 43 2333478888888776543
No 295
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=76.69 E-value=2.5 Score=42.90 Aligned_cols=135 Identities=8% Similarity=0.046 Sum_probs=95.4
Q ss_pred HHHhhcccccccCCc--EEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 451 VIIAGAQKNIGPAGI--TVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 451 ~~~a~~qk~~GpaGl--~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
++..|.-|.+|++|+ +.++++++++++..+ .. + ..++|.+..+.+...|+.. ..++.+.++
T Consensus 218 i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~----------~~---~-~~~~~~~~~~~~~~~l~~~---~~~~~~~~~ 280 (363)
T 3ffh_A 218 IITRTFSKIYGLASARVGYGIADKEIIRQLNI----------VR---P-PFNTTSIGQKLAIEAIKDQ---AFIGECRTS 280 (363)
T ss_dssp EEEEESSSTTCCSSCCCEEEEECHHHHHHHHH----------TC---C-SCCCBHHHHHHHHHHHHCH---HHHHHHHHH
T ss_pred EEEeechhhhcCchhceeeeecCHHHHHHHHH----------hC---C-CCCCCHHHHHHHHHHhcCH---HHHHHHHHH
Confidence 345566799998887 999999999876321 11 1 3468899999888888632 356788888
Q ss_pred HHHHHHHHHHHHhccCCcccccCCCC-----Cc-ccHHHHHHHHHccCccccCC--CCCCccceeeccCCCHHHHHHHHH
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPVQAG-----FP-LDELFLKEAKAHNMIQLKGH--RLVGGIRASIYNAITVDEAVILVK 600 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v~~~-----~~-~~~~~~~~~~~~~i~~~~g~--~~~~~~r~~~~~a~~~~~~~~l~~ 600 (621)
.+++.+.+++.+++..++-..+-... .. ...+|.+.+.++||....|. +..+.||++. . +.||++.|++
T Consensus 281 ~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~-~--~~~~i~~~~~ 357 (363)
T 3ffh_A 281 NANGIKQYEAFAKRFEKVKLYPANGNFVLIDLGIEAGTIFSYLEKNGYITRSGAALGFPTAVRITI-G--KEEDNSAVIA 357 (363)
T ss_dssp HHHHHHHHHHHHHHCTTCEECCCCSSEEEEECSSCHHHHHHHHHHTTEECEETTTTTCTTEEEEEC-C--CHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCceECCCCCeEEEEECCCCHHHHHHHHHHCCeEEEeCccCCCCCeEEEEC-C--CHHHHHHHHH
Confidence 89999999999988544211110100 01 34568888999999865544 4577899994 3 9999999999
Q ss_pred HHHHH
Q psy8733 601 FMKEF 605 (621)
Q Consensus 601 ~~~~~ 605 (621)
.|+++
T Consensus 358 ~l~~~ 362 (363)
T 3ffh_A 358 LLEKL 362 (363)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98864
No 296
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=76.33 E-value=1.9 Score=46.56 Aligned_cols=80 Identities=9% Similarity=0.034 Sum_probs=55.1
Q ss_pred hHHHHHhhcccccccCC---cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHH
Q psy8733 448 FFGVIIAGAQKNIGPAG---ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAK 524 (621)
Q Consensus 448 ~~~~~~a~~qk~~GpaG---l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~ 524 (621)
.-|++..|..|-+|+.| +++++.+++++++... +.. ..-.+++.+..|++.+.++++.. .
T Consensus 251 g~Div~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~-------~~~-----~~g~~~~~~~a~~~~~~l~~l~~-----r 313 (445)
T 1qgn_A 251 GADLVLHSATKFLGGHNDVLAGCISGPLKLVSEIRN-------LHH-----ILGGALNPNAAYLIIRGMKTLHL-----R 313 (445)
T ss_dssp TCSEEEECTTTTTTCSSSCCCEEEEECHHHHHHHHH-------HHH-----HHCCCCCHHHHHHHHHHGGGHHH-----H
T ss_pred CCEEEEECCcccccccccceEEEEEECHHHHHHHHH-------HHH-----HhCCCCCHHHHHHHHHhHHHHHH-----H
Confidence 35788889999999888 8999999998765311 111 01134777888888777776642 2
Q ss_pred HHHHHHHHHHHHHHHHhccCC
Q psy8733 525 MEQNSLQKSVLLYQEIDNSDK 545 (621)
Q Consensus 525 ~~~~~~~ka~~lY~~id~~~~ 545 (621)
++ +..+.++.+.+++++.++
T Consensus 314 ~~-~~~~~a~~l~~~L~~~p~ 333 (445)
T 1qgn_A 314 VQ-QQNSTALRMAEILEAHPK 333 (445)
T ss_dssp HH-HHHHHHHHHHHHHHTCTT
T ss_pred HH-HHHHHHHHHHHHHhcCCC
Confidence 33 345558889999988764
No 297
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=76.32 E-value=1.6 Score=44.96 Aligned_cols=145 Identities=12% Similarity=0.137 Sum_probs=103.9
Q ss_pred HHHHHhhccccc-ccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 449 FGVIIAGAQKNI-GPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 449 ~~~~~a~~qk~~-GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
.|++..|..|.+ |+.| ++++.++++++...+. ........|+|.+....+...|+++.+ .+.+.+
T Consensus 238 ~di~~~s~sK~~~~~~g-G~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~ 303 (401)
T 1fc4_A 238 VDIITGTLGKALGGASG-GYTAARKEVVEWLRQR----------SRPYLFSNSLAPAIVAASIKVLEMVEA---GSELRD 303 (401)
T ss_dssp CSEEEEESSSTTCSSSC-EEEEECHHHHHHHHHH----------CHHHHHSCCCCHHHHHHHHHHHHHHHT---CHHHHH
T ss_pred CcEEEecchhhccCCCC-EEEEcCHHHHHHHHHh----------CcCceeCCCCCHHHHHHHHHHHHHHhc---CHHHHH
Confidence 456777889999 7778 9999999998763211 000111237888999999999998864 578888
Q ss_pred HHHHHHHHHHHHHhccCCcccccCCCC--------Cc-ccHHHHHHHHHccCccccCCCC-----CCccceeeccCCCHH
Q psy8733 528 NSLQKSVLLYQEIDNSDKFYECPVQAG--------FP-LDELFLKEAKAHNMIQLKGHRL-----VGGIRASIYNAITVD 593 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~~~~~~~~v~~~--------~~-~~~~~~~~~~~~~i~~~~g~~~-----~~~~r~~~~~a~~~~ 593 (621)
+.+++.+.+++.+++. ++-..+ ..+ .. ...+|.+.+.++||....|... .+.+|++.-..++.|
T Consensus 304 ~~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~ 381 (401)
T 1fc4_A 304 RLWANARQFREQMSAA-GFTLAG-ADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPE 381 (401)
T ss_dssp HHHHHHHHHHHHHHHT-TCCBCC-SSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTSSCTTCEEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHHHc-CCcccC-CCCCEEEEEcCChHHHHHHHHHHHHCCcEEeeecCCCCCCCCceEEEEeCCCCCHH
Confidence 8999999999999875 221111 111 11 2345888899999987655421 245999988889999
Q ss_pred HHHHHHHHHHHHHHHc
Q psy8733 594 EAVILVKFMKEFRHKH 609 (621)
Q Consensus 594 ~~~~l~~~~~~~~~~~ 609 (621)
+++.+++.|+++.++-
T Consensus 382 ~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 382 QITRAVEAFTRIGKQL 397 (401)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999987654
No 298
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=74.56 E-value=5 Score=46.93 Aligned_cols=49 Identities=6% Similarity=-0.125 Sum_probs=38.2
Q ss_pred cHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHHHHHHHHHHHHc
Q psy8733 558 DELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 558 ~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~~ 609 (621)
...+.+.+.++|++..-+ -+.||++.=+.+|.||++.+++-|++..++.
T Consensus 780 a~~~~~~l~e~Gv~v~p~---g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 780 AKSLLIMLREDGIFTRPL---GNVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp HHHHHHHHHHTTEECCCB---TTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHCCcEEEec---CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 345777888899886532 2679999888999999999999998876543
No 299
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=74.45 E-value=2.3 Score=43.60 Aligned_cols=147 Identities=11% Similarity=0.097 Sum_probs=105.0
Q ss_pred HHHHHhhcccccc-cCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 449 FGVIIAGAQKNIG-PAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
.|++..|..|.+| +.| ++++.++++++.... ........+|+|.+.+..+-..++++. .+++.+.+
T Consensus 236 ~di~~~s~sK~~~g~~g-G~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~ 302 (399)
T 3tqx_A 236 VDILTGTLGKALGGASG-GYTSGHKEIIEWLRN----------RSRPYLFSNTVAPVIVATSLKVLELLK--TEGPQLRK 302 (399)
T ss_dssp CSEEEEESSSSSCSSCC-EEEEECHHHHHHHHH----------HCHHHHSSCCCCHHHHHHHHHHHHHHH--HTHHHHHH
T ss_pred CcEEEecchHhcccCce-EEEEcCHHHHHHHHH----------hCcceeccCCCcHHHHHHHHHHHHHHh--hccHHHHH
Confidence 3566678889998 989 899999998876321 111111234788888888888888874 36889999
Q ss_pred HHHHHHHHHHHHHhccCCcccccCCCC--------Cc-ccHHHHHHHHHccCccccCCC---C--CCccceeeccCCCHH
Q psy8733 528 NSLQKSVLLYQEIDNSDKFYECPVQAG--------FP-LDELFLKEAKAHNMIQLKGHR---L--VGGIRASIYNAITVD 593 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~~~~~~~~v~~~--------~~-~~~~~~~~~~~~~i~~~~g~~---~--~~~~r~~~~~a~~~~ 593 (621)
+.+++.+.+.+.+++.. + ......+ .. ....|.+.+.++||....+.- . .+.+|++.-..++.|
T Consensus 303 ~~~~~~~~l~~~L~~~g-~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~ 380 (399)
T 3tqx_A 303 QLQENSRYFRAGMEKLG-F-QLVPGNHPIIPVMLGDAQLATNMADHLLQEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQ 380 (399)
T ss_dssp HHHHHHHHHHHHHHHHT-C-CBCCCSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTTSCTTCEEEEEECCTTCCHH
T ss_pred HHHHHHHHHHHHHHHcC-C-CcCCCCCCEEEEEeCCHHHHHHHHHHHHHCCCEEeeeCCCCCCCCCceEEEEeecCCCHH
Confidence 99999999999998752 1 1110111 11 345688899999998654321 1 346999987799999
Q ss_pred HHHHHHHHHHHHHHHcC
Q psy8733 594 EAVILVKFMKEFRHKHS 610 (621)
Q Consensus 594 ~~~~l~~~~~~~~~~~~ 610 (621)
+++.+++.|+++.++.+
T Consensus 381 ~i~~~~~~l~~~~~~~~ 397 (399)
T 3tqx_A 381 QLDRAIEAFGQVGKKLG 397 (399)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999887643
No 300
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=74.30 E-value=1.6 Score=44.82 Aligned_cols=149 Identities=12% Similarity=0.129 Sum_probs=100.6
Q ss_pred hHHHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHH
Q psy8733 448 FFGVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKM 525 (621)
Q Consensus 448 ~~~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~ 525 (621)
..+++..|..|.+|++| ++.++++++++++.. . .. ..+..++|.+..+.+...|+...+..+++.+
T Consensus 223 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~----------~-~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 290 (389)
T 1gd9_A 223 ERTITVNGFSKTFAMTGWRLGFVAAPSWIIERMV----------K-FQ-MYNATCPVTFIQYAAAKALKDERSWKAVEEM 290 (389)
T ss_dssp GGEEEEEESTTTTTCGGGCCEEEECCHHHHHHHH----------H-HH-TTTTCSCCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCEEEEecChhhcCCcccceEEEEECHHHHHHHH----------H-HH-hhhccCCCHHHHHHHHHHHhCCCcchHHHHH
Confidence 34677889999999888 599999998876532 1 11 1223567788888877777654433357888
Q ss_pred HHHHHHHHHHHHHHHhccC--------Ccccc-cCCCCCcccHHHHHHHH-HccCccccCC--CC--CCccceeeccCCC
Q psy8733 526 EQNSLQKSVLLYQEIDNSD--------KFYEC-PVQAGFPLDELFLKEAK-AHNMIQLKGH--RL--VGGIRASIYNAIT 591 (621)
Q Consensus 526 ~~~~~~ka~~lY~~id~~~--------~~~~~-~v~~~~~~~~~~~~~~~-~~~i~~~~g~--~~--~~~~r~~~~~a~~ 591 (621)
.++.+++.+.+.+.+++.. +||.. .+.+...-..+|.+.+. ++||....|. +. .+.||++. . .+
T Consensus 291 ~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~-~-~~ 368 (389)
T 1gd9_A 291 RKEYDRRRKLVWKRLNEMGLPTVKPKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISY-A-TA 368 (389)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEEC-C-SC
T ss_pred HHHHHHHHHHHHHHHHHcCCeecCCCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe-c-CC
Confidence 8889999999999998741 22211 11100012345778876 8999866553 32 56799994 3 39
Q ss_pred HHHHHHHHHHHHHHHHHcC
Q psy8733 592 VDEAVILVKFMKEFRHKHS 610 (621)
Q Consensus 592 ~~~~~~l~~~~~~~~~~~~ 610 (621)
.|+++.+++-|+++.++..
T Consensus 369 ~~~i~~~l~~l~~~~~~~~ 387 (389)
T 1gd9_A 369 YEKLEEAMDRMERVLKERK 387 (389)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 9999999999988876543
No 301
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=74.29 E-value=2 Score=44.39 Aligned_cols=145 Identities=12% Similarity=0.053 Sum_probs=98.5
Q ss_pred HHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHH
Q psy8733 450 GVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNS 529 (621)
Q Consensus 450 ~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~ 529 (621)
|++..|..|.+||+| ++++.++++++...+ .........+|+......+...|+.+.. ++.+.++.
T Consensus 235 di~~~s~sK~~~~~G-G~~~~~~~~~~~l~~----------~~~~~~~~~~~~~~~~a~~~~~l~~~~~---~~~~~~~~ 300 (398)
T 3a2b_A 235 DLIMGTFSKSLASLG-GFVAGDADVIDFLKH----------NARSVMFSASMTPASVASTLKALEIIQN---EPEHIEKL 300 (398)
T ss_dssp SEEEEESSSTTCSSC-EEEEECHHHHHHHHH----------HCHHHHSSBCCCHHHHHHHHHHHHHHHH---CTHHHHHH
T ss_pred eEEEecccccccCCC-cEEEeCHHHHHHHHH----------hcccceecCCCCHHHHHHHHHHHHHHhh---CHHHHHHH
Confidence 566778899999999 999999998866321 1111112234454444455566666542 56788888
Q ss_pred HHHHHHHHHHHhccCCcccccCCCC--------Cc-ccHHHHHHHHHccCccccCCCC-----CCccceeeccCCCHHHH
Q psy8733 530 LQKSVLLYQEIDNSDKFYECPVQAG--------FP-LDELFLKEAKAHNMIQLKGHRL-----VGGIRASIYNAITVDEA 595 (621)
Q Consensus 530 ~~ka~~lY~~id~~~~~~~~~v~~~--------~~-~~~~~~~~~~~~~i~~~~g~~~-----~~~~r~~~~~a~~~~~~ 595 (621)
+++.+.+++.+++. ++ ......+ .. ...+|.+.+.++||....|... .+.||++.-..++.|++
T Consensus 301 ~~~~~~l~~~L~~~-g~-~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i 378 (398)
T 3a2b_A 301 WKNTDYAKAQLLDH-GF-DLGATESPILPIFIRSNEKTFWVTKMLQDDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQI 378 (398)
T ss_dssp HHHHHHHHHHHHHT-TC-CBCSCCSSEEEEECCCHHHHHHHHHHHHHTTEECEEECTTTSCGGGCEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHhc-CC-CcCCCCCCEEEEEcCCHHHHHHHHHHHHHCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHH
Confidence 89999999999875 22 1100011 11 2345888899999987665432 46699998888999999
Q ss_pred HHHHHHHHHHHHHcC
Q psy8733 596 VILVKFMKEFRHKHS 610 (621)
Q Consensus 596 ~~l~~~~~~~~~~~~ 610 (621)
+.+++-|+++.++.+
T Consensus 379 ~~~~~~l~~~l~~~~ 393 (398)
T 3a2b_A 379 DEAIEKMVKVFKQAE 393 (398)
T ss_dssp HHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999877654
No 302
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=73.63 E-value=2.9 Score=42.35 Aligned_cols=150 Identities=13% Similarity=0.096 Sum_probs=101.3
Q ss_pred HHHHHhhcccccc-cCCcEEeeecHhHhhh-cCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 449 FGVIIAGAQKNIG-PAGITVVIVREDLLEY-ALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl~v~iv~~~~l~~-~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
.|++..|..|.+| |.|+++++++++++++ ..+...... ........|||...++.+...++++.+ .+.
T Consensus 200 ~di~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~a~~~~l~~~~~-----~~~ 269 (371)
T 2e7j_A 200 ADFIVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKN-----KEVELLGCTARGATIITLMASFPHVRE-----RIK 269 (371)
T ss_dssp CSEEEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTT-----SBGGGTTCCCCSHHHHHHHHHHHHHHH-----HGG
T ss_pred CCEEEecCCcCCCCCCCcEEEEEechhhhhhccccccCcc-----cccccccCCcCHHHHHHHHHHHHHHHH-----HHH
Confidence 4677788899887 6799999999998765 332111000 000111568999999888889998875 566
Q ss_pred HHH--HHHHHHHHHHHhccCCcccc-cCC-CCC----cc--cHHHHHHHHHccCccccCC------CC-CCccc-eeecc
Q psy8733 527 QNS--LQKSVLLYQEIDNSDKFYEC-PVQ-AGF----PL--DELFLKEAKAHNMIQLKGH------RL-VGGIR-ASIYN 588 (621)
Q Consensus 527 ~~~--~~ka~~lY~~id~~~~~~~~-~v~-~~~----~~--~~~~~~~~~~~~i~~~~g~------~~-~~~~r-~~~~~ 588 (621)
++. ++.++.+.+.+++. ++-.. +.. .+. ++ ..+|.+.+.++||.....+ +. .+.|| ++.-.
T Consensus 270 ~~~~~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~~~~~~g~~~~~iRii~~~~ 348 (371)
T 2e7j_A 270 RWDEEVEKARRFAAEMEKL-GIKQLGDNPHNHDLMFFHAEVLYEISKKAKGGRFFLYRELKSRKIHGIKPGLTRYFKLST 348 (371)
T ss_dssp GHHHHHHHHHHHHHHHHHT-TCEEESSSSCCSSEEEEECHHHHHHHHHSSSGGGHHHHHHHHTTEECSCTTCCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHc-CcEEecCCCccCceEEEECCCHHHHHHHHHHCCEEEEeccccccccCCCCCceEEEEeec
Confidence 667 77888899999875 43111 111 110 11 3457788888898854311 11 46799 88877
Q ss_pred C-CCHHHHHHHHHHHHHHHHHc
Q psy8733 589 A-ITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 589 a-~~~~~~~~l~~~~~~~~~~~ 609 (621)
. ++.|+++.+++.|+++.+++
T Consensus 349 ~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 349 YGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHC
T ss_pred cCCCHHHHHHHHHHHHHHHHhc
Confidence 7 99999999999999987765
No 303
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=72.22 E-value=7.2 Score=41.07 Aligned_cols=155 Identities=8% Similarity=-0.004 Sum_probs=96.1
Q ss_pred hHHHHHhhccc-----cc-ccCCcEEeeecHhHhhhcCCCC-----------CceeeeeecccC-CCccCCCch---hHH
Q psy8733 448 FFGVIIAGAQK-----NI-GPAGITVVIVREDLLEYALPIT-----------PTVFHFKINADN-NSVYNTPPT---FVV 506 (621)
Q Consensus 448 ~~~~~~a~~qk-----~~-GpaGl~v~iv~~~~l~~~~~~~-----------p~~~~y~~~~~~-~s~~nTP~~---~~i 506 (621)
..|++.+++|| .+ || |+++++++++++++..... ...+++++..+. .....|||+ -.+
T Consensus 247 g~D~~~~s~kk~~~~~~~~Gp-~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~ 325 (438)
T 1wyu_A 247 GADIAVGDGQSLGLPMGFGGP-HFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQL 325 (438)
T ss_dssp TCSEEEEECTTTTCCCGGGCS-CCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHH
T ss_pred CCCEEEECCcccCCCccCCCC-CeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHH
Confidence 45777778887 34 58 9999999999876632110 000000000000 001234444 222
Q ss_pred HHHH--HHHHHHHhcCChHHHHHHHHHHHHHHHHHHhccCCcccccCC-CC-------C-cccHHHHHHHHHccCcc--c
Q psy8733 507 HVIQ--RVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQ-AG-------F-PLDELFLKEAKAHNMIQ--L 573 (621)
Q Consensus 507 y~~~--~vl~~~~~~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~~v~-~~-------~-~~~~~~~~~~~~~~i~~--~ 573 (621)
..+. ..++++.+. |++.+.++..++++.+++.|.+.+++ ..... +. . ....+|.+.+.++||.. .
T Consensus 326 ~a~~aa~~l~~~~~~-g~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~ 403 (438)
T 1wyu_A 326 TALMGAMYLAALGPE-GLREVALKSVEMAHKLHALLLEVPGV-RPFTPKPFFNEFALALPKDPEAVRRALAERGFHGATP 403 (438)
T ss_dssp HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTTSTTC-EECSCSSBCSEEEEECSSCHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHhCHH-HHHHHHHHHHHHHHHHHHHHhcCCCe-EECCCCCeEEEEEEeCCCCHHHHHHHHHHCCceeccc
Confidence 2222 235555544 48999999999999999999886543 11111 10 0 12356888999999987 2
Q ss_pred cCC-CCCCccceeeccCCCHHHHHHHHHHHHHH
Q psy8733 574 KGH-RLVGGIRASIYNAITVDEAVILVKFMKEF 605 (621)
Q Consensus 574 ~g~-~~~~~~r~~~~~a~~~~~~~~l~~~~~~~ 605 (621)
-|. ...+.||++.-+.++.||++.+++.|+++
T Consensus 404 ~~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~ 436 (438)
T 1wyu_A 404 VPREYGENLALFAATELHEEEDLLALREALKEV 436 (438)
T ss_dssp CCTTSCSSEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred cccccCCCeEEEEecccCCHHHHHHHHHHHHHH
Confidence 232 22678999999999999999999999875
No 304
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=71.77 E-value=1.5 Score=44.96 Aligned_cols=143 Identities=10% Similarity=0.139 Sum_probs=98.4
Q ss_pred hHHHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHH
Q psy8733 448 FFGVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKM 525 (621)
Q Consensus 448 ~~~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~ 525 (621)
..+++..|..|.+|+.| ++.+++++++++.... ... ....|+|.+..+.+...|+......+++.+
T Consensus 212 ~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~-----------~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 279 (381)
T 1v2d_A 212 ERTFTVGSAGKRLEATGYRVGWIVGPKEFMPRLAG-----------MRQ-WTSFSAPTPLQAGVAEALKLARREGFYEAL 279 (381)
T ss_dssp TTEEEEEEHHHHTTCGGGCCEEEECCTTTHHHHHH-----------HHH-HHTSSCCHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred CCEEEEeechhhcCCcccceEEEEeCHHHHHHHHH-----------HHh-hcccCCCcHHHHHHHHHHhCcccHHHHHHH
Confidence 34677788999999888 8999999988765311 111 123467788888888888866434568889
Q ss_pred HHHHHHHHHHHHHHHhccC--------Cccccc-CCCCCcccHHHHHHHHHccCccccC--CCC----CCccceeeccCC
Q psy8733 526 EQNSLQKSVLLYQEIDNSD--------KFYECP-VQAGFPLDELFLKEAKAHNMIQLKG--HRL----VGGIRASIYNAI 590 (621)
Q Consensus 526 ~~~~~~ka~~lY~~id~~~--------~~~~~~-v~~~~~~~~~~~~~~~~~~i~~~~g--~~~----~~~~r~~~~~a~ 590 (621)
.++.+++.+.+.+.+++.. ++|... +. . .+ +.+.++++||....| +.. .+.||++.-.
T Consensus 280 ~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~-~--~~--~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~-- 352 (381)
T 1v2d_A 280 REGYRRRRDLLAGGLRAMGLRVYVPEGTYFLMAELP-G--WD--AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCK-- 352 (381)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEECCSBSSEEEEECT-T--CC--HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCS--
T ss_pred HHHHHHHHHHHHHHHHHCCCEecCCCcceEEEEecC-h--Hh--HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCC--
Confidence 9999999999999998731 111110 11 1 12 777788999986544 332 4669999543
Q ss_pred CHHHHHHHHHHHHHHHHHc
Q psy8733 591 TVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~ 609 (621)
+.|+++.+++.|+++.++.
T Consensus 353 ~~~~i~~~~~~l~~~l~~~ 371 (381)
T 1v2d_A 353 TEEELHLALERLGRVVNSP 371 (381)
T ss_dssp CHHHHHHHHHHHHHHC---
T ss_pred CHHHHHHHHHHHHHHHhhc
Confidence 9999999999888776544
No 305
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=70.30 E-value=16 Score=38.10 Aligned_cols=79 Identities=11% Similarity=0.112 Sum_probs=47.8
Q ss_pred hHHHHHhhcccccccC-C--cEEeeecHhHhh-hcCCCCCceeeeeecccCCCc-cCCCchhHHHHHHHHHHHHHhcCCh
Q psy8733 448 FFGVIIAGAQKNIGPA-G--ITVVIVREDLLE-YALPITPTVFHFKINADNNSV-YNTPPTFVVHVIQRVFAWIKRQGGL 522 (621)
Q Consensus 448 ~~~~~~a~~qk~~Gpa-G--l~v~iv~~~~l~-~~~~~~p~~~~y~~~~~~~s~-~nTP~~~~iy~~~~vl~~~~~~gg~ 522 (621)
..|++..|..|.+|.. + .++++.++++++ +..+ .. ..+ ..+++.+..+++-..|+.+
T Consensus 199 ~~di~~~S~sK~~~~~g~ri~G~~~~~~~~~~~~l~~-----------~~-~~~~g~~~~~~~~~~~~~~l~~~------ 260 (404)
T 1e5e_A 199 GVDVVVHSATKYINGHTDVVAGLICGKADLLQQIRMV-----------GI-KDITGSVISPHDAWLITRGLSTL------ 260 (404)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEECHHHHHHHHHT-----------CC-CCCCCCCCCHHHHHHHHHHHTTH------
T ss_pred CCEEEEEcCccccCCCCCCeEEEEEECHHHHHHHHHH-----------HH-HhCCCCCCCHHHHHHHHHhHhHH------
Confidence 3567788999999844 4 589999999987 4221 11 111 1346677777766666532
Q ss_pred HHHHHHHHHHHHHHHHHHhccC
Q psy8733 523 AKMEQNSLQKSVLLYQEIDNSD 544 (621)
Q Consensus 523 ~~~~~~~~~ka~~lY~~id~~~ 544 (621)
+...++..+.++.+.+++++.+
T Consensus 261 ~~~~~~~~~~~~~l~~~l~~~~ 282 (404)
T 1e5e_A 261 NIRMKAESENAMKVAEYLKSHP 282 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHHHHHHHhCC
Confidence 2223333455666667777654
No 306
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=68.49 E-value=3.1 Score=43.76 Aligned_cols=152 Identities=9% Similarity=0.027 Sum_probs=105.3
Q ss_pred HHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHH
Q psy8733 450 GVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNS 529 (621)
Q Consensus 450 ~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~ 529 (621)
|++..+..|.+|+.| +.++.++++++...+.. .......|+|.+.+..+...|+++.+ ++.+.++.
T Consensus 256 di~~~s~sK~~g~~g-G~v~~~~~l~~~l~~~~----------~~~~~~~~~~~~~~aa~~~al~~~~~---~~~~~~~~ 321 (427)
T 2w8t_A 256 DFVVGTFSKSVGTVG-GFVVSNHPKFEAVRLAC----------RPYIFTASLPPSVVATATTSIRKLMT---AHEKRERL 321 (427)
T ss_dssp SEEEEESSSTTCSCC-EEEEECCTTGGGGGGTC----------HHHHSSCCCCHHHHHHHHHHHHHHTS---CHHHHHHH
T ss_pred cEEEecchhhhccCC-CEEEeCHHHHHHHHHhc----------ccccccCCCCHHHHHHHHHHHHHHhc---CHHHHHHH
Confidence 556677889999888 88899998887643211 00111246777888888888888753 67888999
Q ss_pred HHHHHHHHHHHhccCCcccc-cCCCC--------Cc-ccHHHHHHHHHccCccccCCCC-----CCccceeeccCCCHHH
Q psy8733 530 LQKSVLLYQEIDNSDKFYEC-PVQAG--------FP-LDELFLKEAKAHNMIQLKGHRL-----VGGIRASIYNAITVDE 594 (621)
Q Consensus 530 ~~ka~~lY~~id~~~~~~~~-~v~~~--------~~-~~~~~~~~~~~~~i~~~~g~~~-----~~~~r~~~~~a~~~~~ 594 (621)
+++.+.+.+.+.+. ++-.. +...+ +. ....|.+.+.++||....|... .+.||++.-..++.|+
T Consensus 322 ~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~ 400 (427)
T 2w8t_A 322 WSNARALHGGLKAM-GFRLGTETCDSAIVAVMLEDQEQAAMMWQALLDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQ 400 (427)
T ss_dssp HHHHHHHHHHHHHH-TCEESCSSCCSSEEEEEESSHHHHHHHHHHHHHTTEECEEECTTTSCTTCEEEEEECCTTCCHHH
T ss_pred HHHHHHHHHHHHHc-CCcccCCCCCCCEEEEEECCHHHHHHHHHHHHHCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHH
Confidence 99999999999865 32111 11011 11 2445888999999987655422 3469999888899999
Q ss_pred HHHHHHHHHHHHHHcCCCCccc
Q psy8733 595 AVILVKFMKEFRHKHSRLSAQS 616 (621)
Q Consensus 595 ~~~l~~~~~~~~~~~~~~~~~~ 616 (621)
++.+++.|+++.++...-.-|+
T Consensus 401 i~~~~~~l~~~l~~~~~~~~~~ 422 (427)
T 2w8t_A 401 IQTVLGMFQAAGRAVGVIGLEH 422 (427)
T ss_dssp HHHHHHHHHHHHHHHTCC----
T ss_pred HHHHHHHHHHHHHHhCcccccc
Confidence 9999999999988766655544
No 307
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=67.67 E-value=13 Score=39.00 Aligned_cols=136 Identities=16% Similarity=0.096 Sum_probs=80.9
Q ss_pred HHHHHhhcccccc-cCCc--EEeeec-HhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHH
Q psy8733 449 FGVIIAGAQKNIG-PAGI--TVVIVR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAK 524 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl--~v~iv~-~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~ 524 (621)
.|++..|.-|.+| |.|+ ++++.+ ++++++..+ +.. .+-.+++.+..+++-+.|+++.. .
T Consensus 204 ~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~-------~~~-----~~g~~~~~~~~~~~~~~l~~l~~-----r 266 (403)
T 3cog_A 204 ADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRF-------LQN-----SLGAVPSPIDCYLCNRGLKTLHV-----R 266 (403)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHH-------HHH-----HHCCCCCHHHHHHHHHHHTTHHH-----H
T ss_pred CeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHH-------HHH-----hcCCCCCHHHHHHHHhhhhHHHH-----H
Confidence 4677788899998 7774 888885 677655211 111 12246778888888888887642 1
Q ss_pred HHHHHHHHHHHHHHHHhccC---------------------------CcccccCCCCCcccHHHHHHHHHccCccc----
Q psy8733 525 MEQNSLQKSVLLYQEIDNSD---------------------------KFYECPVQAGFPLDELFLKEAKAHNMIQL---- 573 (621)
Q Consensus 525 ~~~~~~~ka~~lY~~id~~~---------------------------~~~~~~v~~~~~~~~~~~~~~~~~~i~~~---- 573 (621)
++ +-.+.++.+.+++.+.+ +++...+.. ..+...+.+++.||+..
T Consensus 267 ~~-~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~---~~~~~~~~l~~~~i~~~~~s~ 342 (403)
T 3cog_A 267 ME-KHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKG---TLQHAEIFLKNLKLFTLAESL 342 (403)
T ss_dssp HH-HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESS---CHHHHHHHHHHCSSSEECSCC
T ss_pred HH-HHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecC---CHHHHHHHHHhCCcceEccCC
Confidence 22 22334445555555441 122222211 12445666777888532
Q ss_pred cC------------C-----------CC-CCccceeeccCCCHHHHHHHHHHHHHH
Q psy8733 574 KG------------H-----------RL-VGGIRASIYNAITVDEAVILVKFMKEF 605 (621)
Q Consensus 574 ~g------------~-----------~~-~~~~r~~~~~a~~~~~~~~l~~~~~~~ 605 (621)
.| | +. .+.||++.=-..+.++++.|.+.|++.
T Consensus 343 G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~ 398 (403)
T 3cog_A 343 GGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAA 398 (403)
T ss_dssp SSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred CCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 11 1 11 456999998888888888888888754
No 308
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=67.61 E-value=6.7 Score=42.50 Aligned_cols=156 Identities=8% Similarity=0.073 Sum_probs=93.8
Q ss_pred hHHHHHhhcccccc-cCCcEEeeecHh--HhhhcCCCCCceeeeeecccC-CCccCCC--------chhHHHHHHHHHHH
Q psy8733 448 FFGVIIAGAQKNIG-PAGITVVIVRED--LLEYALPITPTVFHFKINADN-NSVYNTP--------PTFVVHVIQRVFAW 515 (621)
Q Consensus 448 ~~~~~~a~~qk~~G-paGl~v~iv~~~--~l~~~~~~~p~~~~y~~~~~~-~s~~nTP--------~~~~iy~~~~vl~~ 515 (621)
..|++..+.+|.+| |-|++++++|++ ++++.....|..+.-...... .-.+.|+ ..+.+|.+ ++.
T Consensus 317 ~aD~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~---l~~ 393 (515)
T 2jis_A 317 RADSVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLM---WKA 393 (515)
T ss_dssp GCSEEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHH---HHH
T ss_pred cCCEEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHH---HHH
Confidence 45788889999997 999999999988 776543333333311100000 0001111 24455554 333
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHHhccCCcccc-cC----------CC---C----Cccc-------HHHHHHHHHccC
Q psy8733 516 IKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYEC-PV----------QA---G----FPLD-------ELFLKEAKAHNM 570 (621)
Q Consensus 516 ~~~~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~-~v----------~~---~----~~~~-------~~~~~~~~~~~i 570 (621)
+.. .|++.+.++..+.++.+++.|.+.++|-.. +. .+ + .++. ..+.+.+.+.|+
T Consensus 394 lg~-~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~~~~~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~G~ 472 (515)
T 2jis_A 394 QGD-QGLERRIDQAFVLARYLVEEMKKREGFELVMEPEFVNVCFWFVPPSLRGKQESPDYHERLSKVAPVLKERMVKEGS 472 (515)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHHHTSTTEEESSCCSSSEEEEEECCGGGTTCTTSTTHHHHHHTHHHHHHHHHHHHTS
T ss_pred HhH-HHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCeeEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCC
Confidence 332 358889999999999999999987654111 00 00 0 0111 125667778887
Q ss_pred ccccCC---CCCCccceee-ccCCCHHHHHHHHHHHHHHHH
Q psy8733 571 IQLKGH---RLVGGIRASI-YNAITVDEAVILVKFMKEFRH 607 (621)
Q Consensus 571 ~~~~g~---~~~~~~r~~~-~~a~~~~~~~~l~~~~~~~~~ 607 (621)
+..... +..+.||++. -+.+|.||++.+++.|+++.+
T Consensus 473 ~~~~~~~~~~~~~~lRis~~~~~~t~edid~~~~~l~~~~~ 513 (515)
T 2jis_A 473 MMIGYQPHGTRGNFFRVVVANSALTCADMDFLLNELERLGQ 513 (515)
T ss_dssp CEEEEEEETTEEEEEEEECCCTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 643211 1235699999 899999999999999988753
No 309
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=66.59 E-value=6.5 Score=39.74 Aligned_cols=152 Identities=11% Similarity=0.133 Sum_probs=102.0
Q ss_pred hHHHHHhhcccccc-cCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 448 FFGVIIAGAQKNIG-PAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 448 ~~~~~~a~~qk~~G-paGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
..|++..+..|.++ |-+++.++++++.+....+..+..+.. ........|++..++..+...++++. ..+.+.+.
T Consensus 236 ~~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~a~~~~~~-~~~~~~~~ 311 (397)
T 3f9t_A 236 GVDSITIDPHKMGHCPIPSGGILFKDIGYKRYLDVDAPYLTE---TRQATILGTRVGFGGACTYAVLRYLG-REGQRKIV 311 (397)
T ss_dssp TCSEEECCTTTTTCCCSSCEEEEESSGGGGGGTCEECTTSSS---SEECSSCSSCCSHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred cCCeEEEccccccCCCCCceEEEEeCHHHHHhhccCCccccC---CCccccccccccchHHHHHHHHHHHh-HHHHHHHH
Confidence 34677789999985 779999999887654432211111111 11223345666556666666666664 44588888
Q ss_pred HHHHHHHHHHHHHHhccCCcccccCCCC-------CcccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHHH
Q psy8733 527 QNSLQKSVLLYQEIDNSDKFYECPVQAG-------FPLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILV 599 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~~~~~~~v~~~-------~~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~ 599 (621)
++.+++++.+++.+++. ++ .....+. ..-...+.+.+.++||....|.. .+.||++.-..++.|+++.++
T Consensus 312 ~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~-~~~~Ri~~~~~~~~e~i~~~~ 388 (397)
T 3f9t_A 312 NECMENTLYLYKKLKEN-NF-KPVIEPILNIVAIEDEDYKEVCKKLRDRGIYVSVCNC-VKALRIVVMPHIKREHIDNFI 388 (397)
T ss_dssp HHHHHHHHHHHHHHHHT-TC-CBSSCCSSSEEEEECTTHHHHHHHHHHTTCBCEECSS-SSEEEEECCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHC-CC-EEEcCCCccEEEEEeCCHHHHHHHHHhCCeEEeccCC-CCEEEEEEcCCCCHHHHHHHH
Confidence 88999999999999876 33 1111111 01145688999999998665543 478999999899999999999
Q ss_pred HHHHHHH
Q psy8733 600 KFMKEFR 606 (621)
Q Consensus 600 ~~~~~~~ 606 (621)
+.|+++.
T Consensus 389 ~~l~~~l 395 (397)
T 3f9t_A 389 EILNSIK 395 (397)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9998764
No 310
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=66.37 E-value=5.7 Score=43.29 Aligned_cols=156 Identities=12% Similarity=0.128 Sum_probs=98.2
Q ss_pred hHHHHHhhcccccc-cCCcEEeeecHh-HhhhcCCCCCceeeeeec-------ccCCCccCCCchhHHHHHHHHHHHHHh
Q psy8733 448 FFGVIIAGAQKNIG-PAGITVVIVRED-LLEYALPITPTVFHFKIN-------ADNNSVYNTPPTFVVHVIQRVFAWIKR 518 (621)
Q Consensus 448 ~~~~~~a~~qk~~G-paGl~v~iv~~~-~l~~~~~~~p~~~~y~~~-------~~~~s~~nTP~~~~iy~~~~vl~~~~~ 518 (621)
..|++..+.+|.+| |-|.+++++++. ++.+.....|..+.-... ....+.-.+.+ |.+.-+...++.+-.
T Consensus 306 ~aDsv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~-~~al~~~~al~~~g~ 384 (511)
T 3vp6_A 306 RANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRH-VDIFKFWLMWKAKGT 384 (511)
T ss_dssp GCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCC-CCHHHHHHHHHHHHH
T ss_pred cCCEEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCc-hHHHHHHHHHHHHhH
Confidence 35778889999987 889999999875 455543333433311100 00011111111 233334444555533
Q ss_pred cCChHHHHHHHHHHHHHHHHHHhccCCcccccC--CCCCc--------------------------ccHHHHHHHHHccC
Q psy8733 519 QGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPV--QAGFP--------------------------LDELFLKEAKAHNM 570 (621)
Q Consensus 519 ~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~~v--~~~~~--------------------------~~~~~~~~~~~~~i 570 (621)
. |++++-++..+.++.+.+.|.+.++| .... ++... ....+.+.+.++|+
T Consensus 385 ~-gl~~~~~~~~~~a~~l~~~L~~~pg~-~l~~~~~p~~~~v~f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~G~ 462 (511)
T 3vp6_A 385 V-GFENQINKCLELAEYLYAKIKNREEF-EMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMESGT 462 (511)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHSCTTE-EESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred H-HHHHHHHHHHHHHHHHHHHHhcCCCE-EEEecCCCCeEEEEEEEeCccccccccchhHHHHHHHHHHHHHHHHHhcCC
Confidence 3 58889999999999999999987764 2211 11000 12357888889997
Q ss_pred ccccCCCC----CCccceee-ccCCCHHHHHHHHHHHHHHHH
Q psy8733 571 IQLKGHRL----VGGIRASI-YNAITVDEAVILVKFMKEFRH 607 (621)
Q Consensus 571 ~~~~g~~~----~~~~r~~~-~~a~~~~~~~~l~~~~~~~~~ 607 (621)
+... |.. .+.||+++ -|.++.+|++.|++-|++..+
T Consensus 463 ~~~~-~~~~~~~~~~lRi~~~~~~~t~~di~~ll~~i~~~~~ 503 (511)
T 3vp6_A 463 TMVG-YQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQ 503 (511)
T ss_dssp CEEE-EEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHC
T ss_pred EEEE-EEEeCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 7543 322 23499998 799999999999999998874
No 311
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=66.12 E-value=5.5 Score=41.55 Aligned_cols=81 Identities=12% Similarity=0.067 Sum_probs=53.2
Q ss_pred hhHHHHHhhcccccccCC---cEEeeec-HhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCCh
Q psy8733 447 FFFGVIIAGAQKNIGPAG---ITVVIVR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGL 522 (621)
Q Consensus 447 ~~~~~~~a~~qk~~GpaG---l~v~iv~-~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~ 522 (621)
...|++..|..|.+|+.| +++++.+ +++.+.... +.. .+-.+++.+..+++-+.++.+.
T Consensus 201 ~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~-------~~~-----~~g~~~~~~~~~~~~~~l~~l~----- 263 (392)
T 3qhx_A 201 LGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAF-------LQN-----GAGAVPGPFDAYLTMRGLKTLV----- 263 (392)
T ss_dssp GTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHH-------HHH-----HHCCCCCHHHHHHHHHHHTTHH-----
T ss_pred hCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHH-------HHH-----hcCCCCCHHHHHHHHhhhhHHH-----
Confidence 345788889999999877 7888887 466554211 111 1234677788887777776543
Q ss_pred HHHHHHHHHHHHHHHHHHhccCC
Q psy8733 523 AKMEQNSLQKSVLLYQEIDNSDK 545 (621)
Q Consensus 523 ~~~~~~~~~ka~~lY~~id~~~~ 545 (621)
...++..+.++.+.+++++.+.
T Consensus 264 -~~~~~~~~~~~~l~~~L~~~~~ 285 (392)
T 3qhx_A 264 -LRMQRHSENAAAVAEFLAEHPA 285 (392)
T ss_dssp -HHHHHHHHHHHHHHHHHHTCTT
T ss_pred -HHHHHHHHHHHHHHHHHhcCCC
Confidence 2334556777788899988753
No 312
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=65.48 E-value=43 Score=35.03 Aligned_cols=136 Identities=6% Similarity=-0.088 Sum_probs=79.0
Q ss_pred hccccccc-CCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHH-HHhcCChHHHHHHHHHH
Q psy8733 455 GAQKNIGP-AGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAW-IKRQGGLAKMEQNSLQK 532 (621)
Q Consensus 455 ~~qk~~Gp-aGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~-~~~~gg~~~~~~~~~~k 532 (621)
+..|.+|+ -.++.++.++++++...+.. ... ....++|+ +|.++...+-.+|+. + + . .+.++.+++
T Consensus 266 s~sK~l~~G~~~G~v~~~~~~~~~l~~~~-----~~~-~~~~~t~~-~n~~~~aa~~aal~~~~-~-~---~~~~~~~~~ 333 (453)
T 2cy8_A 266 CLAKASAGGLPGGILGGREDVMGVLSRGS-----DRK-VLHQGTFT-GNPITAAAAIAAIDTIL-E-D---DVCAKINDL 333 (453)
T ss_dssp EEEGGGGTTSSCEEEEECHHHHTTSSSCC---------------CC-CCHHHHHHHHHHHHHHH-H-T---THHHHHHHH
T ss_pred EEChhhhCCcceEEEechHHHHHHhcccc-----CCC-ceeCCCCC-CCHHHHHHHHHHHHHHh-h-h---hHHHHHHHH
Confidence 55688874 25788999999886532200 000 11223444 566777888888887 6 3 2 244555666
Q ss_pred HHHHHHHHhcc----C--------C-cccccCCC-----C------------C-cccHHHHHHHHHccCccccCCCCCCc
Q psy8733 533 SVLLYQEIDNS----D--------K-FYECPVQA-----G------------F-PLDELFLKEAKAHNMIQLKGHRLVGG 581 (621)
Q Consensus 533 a~~lY~~id~~----~--------~-~~~~~v~~-----~------------~-~~~~~~~~~~~~~~i~~~~g~~~~~~ 581 (621)
.+.+.+.+++- + + |+...+.+ . + .....|.+.+.++|+....+ +.
T Consensus 334 ~~~l~~~L~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~----~~ 409 (453)
T 2cy8_A 334 GQFAREAMNHLFARKGLNWLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGR----GS 409 (453)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTT----TE
T ss_pred HHHHHHHHHHHHhhCCCcEEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeCC----CC
Confidence 66666666532 2 1 11111111 0 0 01345888889999987422 34
Q ss_pred cceeeccCCCHHHHHHHHHHHHHHHHH
Q psy8733 582 IRASIYNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 582 ~r~~~~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
+|++ -+++.|+++.+++.|+++.++
T Consensus 410 ~~l~--~~~t~~~i~~~l~~l~~~l~~ 434 (453)
T 2cy8_A 410 VFLS--AQHEREHVEHLVTTFDRVLDR 434 (453)
T ss_dssp EECC--TTCCHHHHHHHHHHHHHHHHH
T ss_pred EEee--ccCCHHHHHHHHHHHHHHHHH
Confidence 7775 588999999999888877553
No 313
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=65.46 E-value=7.9 Score=41.73 Aligned_cols=155 Identities=12% Similarity=0.116 Sum_probs=98.2
Q ss_pred hHHHHHhhcccccc-cCCcEEeeecH-hHhhhcCCCCCceeeeeec-------ccCC--CccCCCchhHHHHHHHHHHHH
Q psy8733 448 FFGVIIAGAQKNIG-PAGITVVIVRE-DLLEYALPITPTVFHFKIN-------ADNN--SVYNTPPTFVVHVIQRVFAWI 516 (621)
Q Consensus 448 ~~~~~~a~~qk~~G-paGl~v~iv~~-~~l~~~~~~~p~~~~y~~~-------~~~~--s~~nTP~~~~iy~~~~vl~~~ 516 (621)
..|++..+.+|.+| |-|++++++|+ ++++......|..+.-... ..+. +.--...++.+|.+ ++.+
T Consensus 303 ~~D~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~---l~~l 379 (504)
T 2okj_A 303 RANSVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLM---WKAK 379 (504)
T ss_dssp GCSEEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHH---HHHH
T ss_pred cCCEEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHH---HHHh
Confidence 45788889999998 99999999997 4766533222322210000 0000 00011245666655 3444
Q ss_pred HhcCChHHHHHHHHHHHHHHHHHHhccCCcccccC--CCC----------C----------------cccHHHHHHHHHc
Q psy8733 517 KRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPV--QAG----------F----------------PLDELFLKEAKAH 568 (621)
Q Consensus 517 ~~~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~~v--~~~----------~----------------~~~~~~~~~~~~~ 568 (621)
... |++.+.++..+.++.+++.|.+.++| .... ++. . +....+.+.+.++
T Consensus 380 g~~-g~~~~~~~~~~~a~~l~~~L~~~~~~-~~~~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 457 (504)
T 2okj_A 380 GTV-GFENQINKCLELAEYLYAKIKNREEF-EMVFNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALMMES 457 (504)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHHTTCTTE-EESSSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHHHHH
T ss_pred hHH-HHHHHHHHHHHHHHHHHHHHhcCCCE-EEEecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHHHhC
Confidence 333 58888999999999999999887654 2111 110 0 0134577888899
Q ss_pred cCccccC--CCC-CCccceeec-cCCCHHHHHHHHHHHHHHHH
Q psy8733 569 NMIQLKG--HRL-VGGIRASIY-NAITVDEAVILVKFMKEFRH 607 (621)
Q Consensus 569 ~i~~~~g--~~~-~~~~r~~~~-~a~~~~~~~~l~~~~~~~~~ 607 (621)
|++...+ ++. .+.||++.- |.++.||++.+++-|+++.+
T Consensus 458 G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~ 500 (504)
T 2okj_A 458 GTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQ 500 (504)
T ss_dssp TSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHT
T ss_pred CcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHH
Confidence 9764432 221 246999996 89999999999999988764
No 314
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=65.11 E-value=3 Score=42.69 Aligned_cols=145 Identities=16% Similarity=0.106 Sum_probs=93.4
Q ss_pred hHHHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHH
Q psy8733 448 FFGVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKM 525 (621)
Q Consensus 448 ~~~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~ 525 (621)
..+++..|..|.+|++| ++.++.++++++...+ .....++++| .+..+.+-..|+. ....++.+
T Consensus 227 ~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~-----------~~~~~~~~~~-~~~~~a~~~~l~~--~~~~~~~~ 292 (388)
T 1j32_A 227 ERSVVCSGFAKTYAMTGWRVGFLAGPVPLVKAATK-----------IQGHSTSNVC-TFAQYGAIAAYEN--SQDCVQEM 292 (388)
T ss_dssp HTEEEEEESTTTTTCTTTCCEEEECCHHHHHHHHH-----------HHHTTTCSCC-HHHHHHHHHHHHS--CSHHHHHH
T ss_pred CCEEEEeechhccCCcccceEEEEeCHHHHHHHHH-----------HHhhcccCCC-HHHHHHHHHHHhC--CcHHHHHH
Confidence 34677888999999889 8999999998765321 1223345554 4444444333331 12236677
Q ss_pred HHHHHHHHHHHHHHHhccCCcccccCCCC------C---c-ccHHHHHHHHH-ccCccccC--CCCCCccceeeccCCCH
Q psy8733 526 EQNSLQKSVLLYQEIDNSDKFYECPVQAG------F---P-LDELFLKEAKA-HNMIQLKG--HRLVGGIRASIYNAITV 592 (621)
Q Consensus 526 ~~~~~~ka~~lY~~id~~~~~~~~~v~~~------~---~-~~~~~~~~~~~-~~i~~~~g--~~~~~~~r~~~~~a~~~ 592 (621)
.++.+++.+.+.+.+.+.+++-..+-+.+ . . ....|.+.+.+ +||....| ++..+.||++. +++.
T Consensus 293 ~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~--~~~~ 370 (388)
T 1j32_A 293 LAAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAFGADDCIRLSY--ATDL 370 (388)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCBCCCCCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEEC--CSCH
T ss_pred HHHHHHHHHHHHHHHhhCCCCcccCCCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEe--cCCH
Confidence 88888999999999987644311110100 0 1 23457777765 79986555 44467899995 3799
Q ss_pred HHHHHHHHHHHHHHHH
Q psy8733 593 DEAVILVKFMKEFRHK 608 (621)
Q Consensus 593 ~~~~~l~~~~~~~~~~ 608 (621)
|+++.+++-|+++.++
T Consensus 371 ~~i~~~~~~l~~~l~~ 386 (388)
T 1j32_A 371 DTIKRGMERLEKFLHG 386 (388)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999998888876543
No 315
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=64.06 E-value=7.2 Score=39.94 Aligned_cols=146 Identities=12% Similarity=0.081 Sum_probs=101.3
Q ss_pred HHHHHhhcccccc-cCCcEEeeec-HhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 449 FGVIIAGAQKNIG-PAGITVVIVR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl~v~iv~-~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
.|++..|..|.++ +-| +.++.+ ++++++..+ ......++||+...+..+...|+++.+ .+++.+.
T Consensus 217 ~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~l~~-----------~~~~~~~~~~~~~~~~a~~~al~~~~~-~~~~~~~ 283 (407)
T 2dkj_A 217 AHVVTSTTHKTLRGPRG-GLILSNDPELGKRIDK-----------LIFPGIQGGPLEHVIAGKAVAFFEALQ-PEFKEYS 283 (407)
T ss_dssp CSEEEEESSGGGCCCSC-EEEEESCHHHHHHHHH-----------HHTTTTCSSCCHHHHHHHHHHHHHHHS-HHHHHHH
T ss_pred ccEEEEeccccCCCCCc-eEEEECCHHHHHHHHh-----------hhcccccCCCcHHHHHHHHHHHHHHHH-hhHHHHH
Confidence 3666778889885 777 999999 788765321 111223578888777777788887653 3588899
Q ss_pred HHHHHHHHHHHHHHhccCCcccc-cCCCC--------C-c-ccHHHHHHHHHccCccccCCC--------CCCccceeec
Q psy8733 527 QNSLQKSVLLYQEIDNSDKFYEC-PVQAG--------F-P-LDELFLKEAKAHNMIQLKGHR--------LVGGIRASIY 587 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~~~~~~-~v~~~--------~-~-~~~~~~~~~~~~~i~~~~g~~--------~~~~~r~~~~ 587 (621)
++.+++.+.+++.|++. ++-.. +-..+ . . ....+.+.++++||....|+. ..+.+|++.-
T Consensus 284 ~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~ 362 (407)
T 2dkj_A 284 RLVVENAKRLAEELARR-GYRIVTGGTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPPRVTSGIRIGTP 362 (407)
T ss_dssp HHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEECH
T ss_pred HHHHHHHHHHHHHHHhC-CceeecCCCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccccCCCceeeecc
Confidence 99999999999999875 32110 00010 0 1 234578888999998776642 2456999863
Q ss_pred c----CCCHHHHHHHHHHHHHHHHH
Q psy8733 588 N----AITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 588 ~----a~~~~~~~~l~~~~~~~~~~ 608 (621)
+ +++.||++.+++.|+++.++
T Consensus 363 ~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 363 AITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp HHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred cccccCCCHHHHHHHHHHHHHHHhc
Confidence 3 59999999999999988766
No 316
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=62.96 E-value=9.9 Score=40.64 Aligned_cols=154 Identities=8% Similarity=0.002 Sum_probs=98.6
Q ss_pred HHHHhhccccc-ccCCcEEeeecHhHhhhcCC-CCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 450 GVIIAGAQKNI-GPAGITVVIVREDLLEYALP-ITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 450 ~~~~a~~qk~~-GpaGl~v~iv~~~~l~~~~~-~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
|++..+.+|.+ ||.|+++++++++.+..... ..|.... ....+.+...|++...+..+.-.++.+.+. |++.+.+
T Consensus 272 d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~a~~aal~~l~~~-~~~~~~~ 348 (497)
T 3mc6_A 272 TSISCDTHKYGFAPKGSSVIMYRNSDLRMHQYYVNPAWTG--GLYGSPTLAGSRPGAIVVGCWATMVNMGEN-GYIESCQ 348 (497)
T ss_dssp CEEEEETTTTTCCCSSCEEEECSSHHHHTTTSCCBTTCTT--SCBCCSSSCSSCBHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred cEEEECchhhcCCCCCceeEEecCHHHHhhhhcccccccC--CCcCCcCcccCCcchhHHHHHHHHHHHhHH-HHHHHHH
Confidence 55567788986 68999999999887654321 1121110 001122333344444455555556666543 4788888
Q ss_pred HHHHHHHHHHHHHhcc-CCcccccCCCC--------Cc-ccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHH
Q psy8733 528 NSLQKSVLLYQEIDNS-DKFYECPVQAG--------FP-LDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVI 597 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~-~~~~~~~v~~~--------~~-~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~ 597 (621)
+..+.++.+++.|.+. ++|-.. ..+. .. -..++.+.+.++||..-.+ +.-+.+|++.- .++.|+++.
T Consensus 349 ~~~~~~~~l~~~L~~~~~g~~~~-~~~~~~~v~~~~~~~~~~~l~~~L~~~Gi~v~~~-~~~~~~ri~~~-~~t~e~i~~ 425 (497)
T 3mc6_A 349 EIVGAAMKFKKYIQENIPDLDIM-GNPRYSVISFSSKTLNIHELSDRLSKKGWHFNAL-QKPVALHMAFT-RLSAHVVDE 425 (497)
T ss_dssp HHHHHHHHHHHHHHHSCTTCEEC-SCCCSSEEEEECTTTTHHHHHHHHHTTTCBCEEC-CSSCCEEEECC-TTTTCTHHH
T ss_pred HHHHHHHHHHHHHHhcCCCEEEe-cCCCeeEEEEeCCCCCHHHHHHHHHhCCEEEecC-CCCCeEEEEEe-CCCHHHHHH
Confidence 9999999999999984 664321 1110 11 2356889999999875433 33456888776 789999999
Q ss_pred HHHHHHHHHHHc
Q psy8733 598 LVKFMKEFRHKH 609 (621)
Q Consensus 598 l~~~~~~~~~~~ 609 (621)
+++-|++..++.
T Consensus 426 ~~~~L~~~l~~~ 437 (497)
T 3mc6_A 426 ICDILRTTVQEL 437 (497)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998877643
No 317
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=62.06 E-value=7.3 Score=42.28 Aligned_cols=156 Identities=14% Similarity=0.079 Sum_probs=100.9
Q ss_pred hHHHHHhhccccc-ccCCcEEeeecH-hHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHH
Q psy8733 448 FFGVIIAGAQKNI-GPAGITVVIVRE-DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKM 525 (621)
Q Consensus 448 ~~~~~~a~~qk~~-GpaGl~v~iv~~-~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~ 525 (621)
..|++..+++|.+ ||.|++++++++ +.+.......|..+... .....+-.|++...+.-+...|+.+... |...+
T Consensus 267 ~~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~--~~~~~~~~sr~~~~~~a~~~al~~lg~~-g~~~~ 343 (502)
T 3hbx_A 267 LVKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGAD--QPTFTLNFSKGSSQVIAQYYQLIRLGHE-GYRNV 343 (502)
T ss_dssp TEEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSC--EEECCSCCSCBSHHHHHHHHHHHHHHHH-HHHHH
T ss_pred CceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCC--CCCccccCCchHHHHHHHHHHHHHHHHH-HHHHH
Confidence 4577788999999 599999999875 44433322222222110 1112233456655555555566655444 47788
Q ss_pred HHHHHHHHHHHHHHHhccCCcccccCC-C-----------CCcccH-HHHHHHHHccCccccCCCC------CCccceee
Q psy8733 526 EQNSLQKSVLLYQEIDNSDKFYECPVQ-A-----------GFPLDE-LFLKEAKAHNMIQLKGHRL------VGGIRASI 586 (621)
Q Consensus 526 ~~~~~~ka~~lY~~id~~~~~~~~~v~-~-----------~~~~~~-~~~~~~~~~~i~~~~g~~~------~~~~r~~~ 586 (621)
.++..+.++.+++.|.+.++|- .... + +...+. .+.+.+.++||+.. .|+. .+.+|+++
T Consensus 344 ~~~~~~~a~~l~~~L~~~~~~~-~~~~~~~~~~v~f~~~~~~~~~~~~l~~~L~~~Gi~v~-~~~~p~~~~~~~~lRisv 421 (502)
T 3hbx_A 344 MENCRENMIVLREGLEKTERFN-IVSKDEGVPLVAFSLKDSSCHTEFEISDMLRRYGWIVP-AYTMPPNAQHITVLRVVI 421 (502)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEE-ECSCSSSSSEEEEEESSCSSCCHHHHHHHHHTTTCBCC-EEECCTTCTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCEE-EEeCCCCceEEEEEecCCCcCCHHHHHHHHHhCCcEEe-eccCCcccCCceEEEEEe
Confidence 8888899999999999877542 1111 1 112333 78899999999853 2221 34599999
Q ss_pred ccCCCHHHHHHHHHHHHHHHHH
Q psy8733 587 YNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 587 ~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
=+.++.|+++.|++-|++..++
T Consensus 422 ~~~~t~edid~li~~L~~~l~~ 443 (502)
T 3hbx_A 422 REDFSRTLAERLVIDIEKVMRE 443 (502)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999988876653
No 318
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=61.89 E-value=5.9 Score=41.20 Aligned_cols=157 Identities=10% Similarity=0.026 Sum_probs=103.9
Q ss_pred HHHHhhcccccccCC--cEEeeecHhHhh-hcCCCCCcee----eee-ecccCCCccCCCchhHHHHHHHHHHHHHh-cC
Q psy8733 450 GVIIAGAQKNIGPAG--ITVVIVREDLLE-YALPITPTVF----HFK-INADNNSVYNTPPTFVVHVIQRVFAWIKR-QG 520 (621)
Q Consensus 450 ~~~~a~~qk~~GpaG--l~v~iv~~~~l~-~~~~~~p~~~----~y~-~~~~~~s~~nTP~~~~iy~~~~vl~~~~~-~g 520 (621)
+++..|..|.+|++| ++.++.++++++ ......+... .|. .......+..++|.+..+.+...|+...+ ..
T Consensus 252 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 331 (437)
T 3g0t_A 252 YILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACNDGEY 331 (437)
T ss_dssp EEEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHHTTSC
T ss_pred EEEEEcCccCCCCccceeEEEEECHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcHhHHH
Confidence 366778899999777 899999999987 5111101000 000 00011234568889999999888887643 22
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCcccc-------cCCCC--------CcccHHHHHHHHHccCccccCC--CC--CCc
Q psy8733 521 GLAKMEQNSLQKSVLLYQEIDNSDKFYEC-------PVQAG--------FPLDELFLKEAKAHNMIQLKGH--RL--VGG 581 (621)
Q Consensus 521 g~~~~~~~~~~ka~~lY~~id~~~~~~~~-------~v~~~--------~~~~~~~~~~~~~~~i~~~~g~--~~--~~~ 581 (621)
.++.+.++.+++.+.+.+.+++. ++-.. +...+ .....+|.+.+.++||....|. +. .+.
T Consensus 332 ~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~~~~~~~~~ 410 (437)
T 3g0t_A 332 NFRDSVIEYGRKARIMKKMFLDN-GFNIVYDKDGNEPLADGFYFTVGYKGMDSSKLIEKFVRYGMCAITLKTTGSKRNEA 410 (437)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTT-TEEESSCEETTEECCSSSEEEEEETTCCHHHHHHHHHHTTEECEESTTTTCCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-CCEEeccccCCCCCceeEEEEEecCCCCHHHHHHHHHHcCeEEeeccccCCCCCCE
Confidence 28899999999999999999875 22111 10111 0123568889999999866554 32 267
Q ss_pred cceeeccCCCHHHHHHHHHHHHHHHHH
Q psy8733 582 IRASIYNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 582 ~r~~~~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
||++ |...+.|+++.+++.|+++.++
T Consensus 411 iRis-~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 411 MRIC-TSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp EEEE-CSSSCGGGHHHHHHHHHHHHHH
T ss_pred EEEE-EecCCHHHHHHHHHHHHHHHhc
Confidence 9996 4566999999999999987653
No 319
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=61.81 E-value=6.5 Score=39.13 Aligned_cols=136 Identities=13% Similarity=0.118 Sum_probs=90.9
Q ss_pred HHHHHhhcccccccCCc--EEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 449 FGVIIAGAQKNIGPAGI--TVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl--~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
.+++..|..|.+|++|+ +.++.++++++...+ ...+.++|.+..+.+...|+.. +..+...
T Consensus 189 ~~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~l~~--------------~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~ 251 (337)
T 3p1t_A 189 NELVFRSFSKSYGLAGLRLGALFGPSELIAAMKR--------------KQWFCNVGTLDLHALEAALDND---RAREAHI 251 (337)
T ss_dssp TEEEEEESSSTTCCTTTCCEEEECCHHHHHHHHT--------------TSCTTCSCHHHHHHHHHHHTCH---HHHHHHH
T ss_pred CEEEEeeCchhccCcchheEEEEeCHHHHHHHHh--------------hcCCCCCCHHHHHHHHHHhCCH---HHHHHHH
Confidence 34566788899997765 888889998876322 1234678888887776666532 2345555
Q ss_pred HHHHHHHHHHHHHHhccCCcccccCCCC------CcccHHHHHHHHHccCccccC--CCCCCccceeeccCCCHHHHHHH
Q psy8733 527 QNSLQKSVLLYQEIDNSDKFYECPVQAG------FPLDELFLKEAKAHNMIQLKG--HRLVGGIRASIYNAITVDEAVIL 598 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~~~~~~~v~~~------~~~~~~~~~~~~~~~i~~~~g--~~~~~~~r~~~~~a~~~~~~~~l 598 (621)
++..++.+.+.+.+.+. ++ ......+ ..-...+.+.++++||....| ++..+.||++.= +.++++.|
T Consensus 252 ~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~~~~~iRis~~---~~~~~~~l 326 (337)
T 3p1t_A 252 AKTLAQRRRVADALRGL-GY-RVASSEANFVLVENAAGERTLRFLRERGIQVKDAGQFGLHHHIRISIG---REEDNDRL 326 (337)
T ss_dssp HHHHHHHHHHHHHHHHT-TC-CBCCCSSSEEEEECTTTHHHHHHHHHTTEECEEGGGGTCCSEEEEECC---CHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHC-cC-EECCCCCeEEEEEcCCHHHHHHHHHHCCeEEEECccCCCCCeEEEecC---CHHHHHHH
Confidence 55666778888988865 22 1110110 011245778889999985444 455678999953 79999999
Q ss_pred HHHHHHHH
Q psy8733 599 VKFMKEFR 606 (621)
Q Consensus 599 ~~~~~~~~ 606 (621)
++.|+++.
T Consensus 327 ~~al~~~~ 334 (337)
T 3p1t_A 327 LAALAEYS 334 (337)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99999875
No 320
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=61.13 E-value=5.1 Score=40.30 Aligned_cols=136 Identities=13% Similarity=0.055 Sum_probs=96.9
Q ss_pred HHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
++..|..|.+|++| ++.++.+++++++..+ ... +.++|.+..+.+...|+.. ..++.+.++
T Consensus 206 i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~----------~~~----~~~~~~~~~~a~~~~l~~~---~~~~~~~~~ 268 (354)
T 3ly1_A 206 ILLKTFSKIHAMAGMRVGYAVAHPTVIALMGR----------YVA----GEKINFSGVDAALASMNDS---AFITYSKKS 268 (354)
T ss_dssp EEEEESSSTTCCGGGCCEEEECCHHHHHHHGG----------GTT----CSCCCHHHHHHHHHHTTCH---HHHHHHHHH
T ss_pred EEEeeChhhccChhhhheeeecCHHHHHHHHH----------hcC----CCCCCHHHHHHHHHHhcCH---HHHHHHHHH
Confidence 55678889999665 6888999998876322 111 1588999998888887743 357788888
Q ss_pred HHHHHHHHHHHHhccCCcccccCCCC------C-cccHHHHHHHHHccCccccCC--CCCCccceeeccCCCHHHHHHHH
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPVQAG------F-PLDELFLKEAKAHNMIQLKGH--RLVGGIRASIYNAITVDEAVILV 599 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v~~~------~-~~~~~~~~~~~~~~i~~~~g~--~~~~~~r~~~~~a~~~~~~~~l~ 599 (621)
.+++.+.+.+.+++. ++-..+ ..+ . .....|.+.++++||... |. +..+.||++. .+.||++.++
T Consensus 269 ~~~~~~~l~~~l~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~gi~v~-g~~~~~~~~iRis~---~~~~~i~~~~ 342 (354)
T 3ly1_A 269 NDVSRQILLKALEDL-KLPYLP-SEGNFVFHQLVVPLKDYQTHMADAGVLIG-RAFPPADNWCRISL---GTPQEMQWVA 342 (354)
T ss_dssp HHHHHHHHHHHHHHH-TCCBCC-CCSSEEEEECSSCHHHHHHHHHHTTEECC-CCCTTCTTEEEEEC---CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC-CCeECC-CCceEEEEECCCCHHHHHHHHHHCCEEEe-ecCCCCCCEEEEEc---CCHHHHHHHH
Confidence 899999999999875 221111 010 0 124568888999999866 43 3467799994 2899999999
Q ss_pred HHHHHHHHHc
Q psy8733 600 KFMKEFRHKH 609 (621)
Q Consensus 600 ~~~~~~~~~~ 609 (621)
+.|+++.+++
T Consensus 343 ~~l~~~l~~~ 352 (354)
T 3ly1_A 343 DTMREFRKKS 352 (354)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 9999988754
No 321
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=60.80 E-value=7.3 Score=41.34 Aligned_cols=79 Identities=10% Similarity=-0.011 Sum_probs=51.4
Q ss_pred hHHHHHhhcccccccCC---cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHH
Q psy8733 448 FFGVIIAGAQKNIGPAG---ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAK 524 (621)
Q Consensus 448 ~~~~~~a~~qk~~GpaG---l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~ 524 (621)
..|++..|..|.+|+.| .++++.+++++++... +... .-.+++-+..|++.+.++++.. .
T Consensus 220 g~Div~~S~sK~lg~~g~~~~G~l~~~~~~~~~l~~-------~~~~-----~G~~~~~~~a~~~~~~l~~l~~-----r 282 (415)
T 2fq6_A 220 GIDVSIQAATKYLVGHSDAMIGTAVCNARCWEQLRE-------NAYL-----MGQMVDADTAYITSRGLRTLGV-----R 282 (415)
T ss_dssp TCSEEEEETTTTTTCSSSCCCEEEEECTTTHHHHHH-------HHHH-----TTCCCCHHHHHHHHHHHHHHHH-----H
T ss_pred CCeEEEEeCccccCCCCCceEEEEEeCHHHHHHHHH-------HHHh-----cCCCCCHHHHHHHHhhhhHHHH-----H
Confidence 35788899999999877 6888888887654221 1111 1124455677777777777652 2
Q ss_pred HHHHHHHHHHHHHHHHhccC
Q psy8733 525 MEQNSLQKSVLLYQEIDNSD 544 (621)
Q Consensus 525 ~~~~~~~ka~~lY~~id~~~ 544 (621)
++ +..+.++.+.+++++.+
T Consensus 283 ~~-~~~~n~~~l~~~L~~~~ 301 (415)
T 2fq6_A 283 LR-QHHESSLKVAEWLAEHP 301 (415)
T ss_dssp HH-HHHHHHHHHHHHHHTCT
T ss_pred HH-HHHHHHHHHHHHHHcCC
Confidence 33 33566788888888764
No 322
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=60.50 E-value=3.5 Score=42.73 Aligned_cols=143 Identities=13% Similarity=0.156 Sum_probs=94.6
Q ss_pred HHHHhhcccccccCC--cEEee--ecH----hHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCC
Q psy8733 450 GVIIAGAQKNIGPAG--ITVVI--VRE----DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGG 521 (621)
Q Consensus 450 ~~~~a~~qk~~GpaG--l~v~i--v~~----~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg 521 (621)
+++..|..|.+|++| ++.++ .++ +++++... + . .. + .++|.+..+.+...|+... + +
T Consensus 237 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~l~~~l~~-------~---~-~~-~-~~~~~~~~~a~~~~l~~~~-~-~ 301 (406)
T 1xi9_A 237 VIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDR-------L---A-RI-R-LCPNTPAQFAAIAGLTGPM-D-Y 301 (406)
T ss_dssp EEEEEESTTTTCCGGGCCEEEEEECTTCTTHHHHHHHHH-------H---H-HH-T-CCSCSHHHHHHHHHHHSCC-H-H
T ss_pred EEEEeccccccCCCccEEEEEEEecCchhHHHHHHHHHH-------H---H-Hh-h-cCCCHHHHHHHHHHHhCCc-H-H
Confidence 345678899999888 78888 788 77765321 1 1 11 1 4677777777776665321 1 2
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCc---------ccc-cCCCC-CcccHHHHHHHH-HccCccccC--CCC--CCcccee
Q psy8733 522 LAKMEQNSLQKSVLLYQEIDNSDKF---------YEC-PVQAG-FPLDELFLKEAK-AHNMIQLKG--HRL--VGGIRAS 585 (621)
Q Consensus 522 ~~~~~~~~~~ka~~lY~~id~~~~~---------~~~-~v~~~-~~~~~~~~~~~~-~~~i~~~~g--~~~--~~~~r~~ 585 (621)
++.+.++.+++.+.+++.+++.+++ |.. .+.+. .....+|.+.+. ++||....| ++. .+.||++
T Consensus 302 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis 381 (406)
T 1xi9_A 302 LKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAV 381 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTEECCCCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCeeecCCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEE
Confidence 7788888899999999999876432 211 11110 012345777775 899976544 443 5779999
Q ss_pred eccCCCHHHHHHHHHHHHHHHHHc
Q psy8733 586 IYNAITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 586 ~~~a~~~~~~~~l~~~~~~~~~~~ 609 (621)
.- ++.|+++.+++-|+++.++.
T Consensus 382 ~~--~~~~~i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 382 FL--PPIEILEEAMDRFEKFMKER 403 (406)
T ss_dssp CC--SCHHHHHHHHHHHHHHHHHC
T ss_pred ec--CCHHHHHHHHHHHHHHHHHH
Confidence 63 99999999999888876653
No 323
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=60.36 E-value=3.6 Score=42.95 Aligned_cols=145 Identities=14% Similarity=0.098 Sum_probs=95.6
Q ss_pred hHHHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHH-----HHhcC
Q psy8733 448 FFGVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAW-----IKRQG 520 (621)
Q Consensus 448 ~~~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~-----~~~~g 520 (621)
..+++..|..|.+|++| ++.+++++++++... . .....++ ++|.+....+...|+. .....
T Consensus 245 ~~~~~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~----------~-~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~ 312 (429)
T 1yiz_A 245 ERTITIGSAGKTFSLTGWKIGWAYGPEALLKNLQ----------M-VHQNCVY-TCATPIQEAIAVGFETELKRLKSPEC 312 (429)
T ss_dssp GGEEEEEEHHHHHTCGGGCCEEEESCHHHHHHHH----------H-HHHTTTC-CCCHHHHHHHHHHHHHHHTTTTSTTS
T ss_pred CceEEEecchhccCCCCcceEEEEeCHHHHHHHH----------H-HHhhccc-CCChHHHHHHHHHHhcccccccchHH
Confidence 34667789999999889 899999999876531 1 1112233 4566777777666665 21144
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccC--------Ccccc-cCCCCC-----------cccHHHHHHH-HHccCccccC--CC
Q psy8733 521 GLAKMEQNSLQKSVLLYQEIDNSD--------KFYEC-PVQAGF-----------PLDELFLKEA-KAHNMIQLKG--HR 577 (621)
Q Consensus 521 g~~~~~~~~~~ka~~lY~~id~~~--------~~~~~-~v~~~~-----------~~~~~~~~~~-~~~~i~~~~g--~~ 577 (621)
.++.+.++.+++.+.+.+.+++.. +||.. .+.+.. ....+|.+.+ +++||....| |.
T Consensus 313 ~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~ 392 (429)
T 1yiz_A 313 YFNSISGELMAKRDYMASFLAEVGMNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFY 392 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEECSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhC
Confidence 588888899999999999987641 22222 111110 1234577765 5899987554 43
Q ss_pred C-------CCccceeeccCCCHHHHHHHHHHHHHHH
Q psy8733 578 L-------VGGIRASIYNAITVDEAVILVKFMKEFR 606 (621)
Q Consensus 578 ~-------~~~~r~~~~~a~~~~~~~~l~~~~~~~~ 606 (621)
. .+.||++.- .+.|+++.+++-|+++.
T Consensus 393 ~~~~~~~~~~~iRis~~--~~~e~i~~~l~~l~~~l 426 (429)
T 1yiz_A 393 SEPNKHLGEDFVRYCFF--KKDENLQKAAEILRKWK 426 (429)
T ss_dssp CGGGGGGTTTEEEEECC--SCHHHHHHHHHHHHHHS
T ss_pred CCcccCCCCCeEEEEec--CCHHHHHHHHHHHHHhc
Confidence 2 466999864 59999999999888763
No 324
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=60.30 E-value=3.3 Score=42.93 Aligned_cols=148 Identities=12% Similarity=0.020 Sum_probs=89.9
Q ss_pred HHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
++..|..|.+|++| ++.+++++++++.....+..+ ++ .....+++|+|.+..+.+...|+. +.++.+.++
T Consensus 229 i~~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~a~~~~l~~----~~~~~~~~~ 300 (400)
T 3asa_A 229 IEINSFSKPLGFAGIRLGWTVIPQELTYADGHFVIQD--WE--RFLSTTFNGASIPAQEAGVAGLSI----LPQLEAIHY 300 (400)
T ss_dssp EEEEECCGGGTTTTCCCEEEECCTTCBCTTSCBHHHH--HH--HHHHHHCCCCCHHHHHHHHHHHHH----TTTCHHHHH
T ss_pred EEEecchhhcCCcchheeEEeeChhhccchhhhHHHH--HH--HHhccCccCCChHHHHHHHHHhCc----HHHHHHHHH
Confidence 55688899999888 588888888732110000000 00 112344678999988877666653 368888899
Q ss_pred HHHHHHHHHHHHhccC--------Ccccc-c-CCCCCcccHHHHHHH-HHccCccccC--CCC--CCccceeeccCCCHH
Q psy8733 529 SLQKSVLLYQEIDNSD--------KFYEC-P-VQAGFPLDELFLKEA-KAHNMIQLKG--HRL--VGGIRASIYNAITVD 593 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~--------~~~~~-~-v~~~~~~~~~~~~~~-~~~~i~~~~g--~~~--~~~~r~~~~~a~~~~ 593 (621)
.+++.+.+++.+++.. ++|.. . +..+. -..++.+.+ +++||....| ++. .+.||++. ..+.|
T Consensus 301 ~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~--~~~~e 377 (400)
T 3asa_A 301 YRENSDLLRKALLATGFEVFGGEHAPYLWVKPTQANI-SDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSS--LGKRE 377 (400)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECSSSSEEEEECCCTTC-CTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEEC--CSCHH
T ss_pred HHHHHHHHHHHHHHCCCeeeCCCCceEEEEeccCCCC-CHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEe--eCCHH
Confidence 9999999999997641 22211 1 21111 122455555 4569986555 332 56699994 57899
Q ss_pred HHHHHHHHHHHHHHHc
Q psy8733 594 EAVILVKFMKEFRHKH 609 (621)
Q Consensus 594 ~~~~l~~~~~~~~~~~ 609 (621)
+++.+++-|+++.+++
T Consensus 378 ~i~~~l~~l~~~~~~~ 393 (400)
T 3asa_A 378 DILAACERLQMAPALQ 393 (400)
T ss_dssp HHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9988888877666543
No 325
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=59.55 E-value=4.7 Score=41.05 Aligned_cols=144 Identities=13% Similarity=-0.004 Sum_probs=96.9
Q ss_pred HHHhhcccccccCC--cEEeeec-HhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~-~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
++..|..|.+|++| ++.++.+ +++++... . ......+.+||.+..+.+...|+... ..++.+.+
T Consensus 227 i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~ 293 (391)
T 3dzz_A 227 VSLISPSKTFNLAALHAACAIIPNPDLRARAE----------E-SFFLAGIGEPNLLAIPAAIAAYEEGH--DWLRELKQ 293 (391)
T ss_dssp EEEECSHHHHTCTTTCCEEEECCSHHHHHHHH----------H-HHHHHTCSSCCTTHHHHHHHHHHHCH--HHHHHHHH
T ss_pred EEEEeChhhccccchhheEEEECCHHHHHHHH----------H-HHHhhccCCCCHHHHHHHHHHHhccH--HHHHHHHH
Confidence 66778899999776 7888887 88876531 1 11122345688888888877776532 23677888
Q ss_pred HHHHHHHHHHHHHhc-cCCcccccCCCC--------C--cccHHHHHHH-HHccCccccC--CCC--CCccceeeccCCC
Q psy8733 528 NSLQKSVLLYQEIDN-SDKFYECPVQAG--------F--PLDELFLKEA-KAHNMIQLKG--HRL--VGGIRASIYNAIT 591 (621)
Q Consensus 528 ~~~~ka~~lY~~id~-~~~~~~~~v~~~--------~--~~~~~~~~~~-~~~~i~~~~g--~~~--~~~~r~~~~~a~~ 591 (621)
+.+++.+.+.+.+++ .+++-..+-+.+ . ....+|.+.+ +++||....| ++. .+.||++.= ++
T Consensus 294 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~ 371 (391)
T 3dzz_A 294 VLRDNFAYAREFLAKEVPEVKVLDSNASYLAWVDISALGMNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLA--CP 371 (391)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEECCCCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECC--SC
T ss_pred HHHHHHHHHHHHHHhhCCCcEEeccCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CC
Confidence 888999999999988 444311110000 0 1234578888 5899986655 343 366999843 79
Q ss_pred HHHHHHHHHHHHHHHHHc
Q psy8733 592 VDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 592 ~~~~~~l~~~~~~~~~~~ 609 (621)
.|+++.+++-|+++.++.
T Consensus 372 ~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 372 KELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999998877653
No 326
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=59.50 E-value=4.9 Score=41.95 Aligned_cols=141 Identities=14% Similarity=0.091 Sum_probs=93.9
Q ss_pred HHHhhcccccccCCc--EEeeec-HhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 451 VIIAGAQKNIGPAGI--TVVIVR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 451 ~~~a~~qk~~GpaGl--~v~iv~-~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
++..|..|.+|++|+ +.++++ +++.+.- +. .....++.+||.+++..+...++... ..++.+.+
T Consensus 261 i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~----------~~-~~~~~~~~~~n~~~~~a~~aal~~~~--~~~~~~~~ 327 (421)
T 3l8a_A 261 IILSSATKTFNIAGTKNSFAIIQNESLRRKF----------QY-RQLANNQHEVPTVGMIATQAAFQYGK--PWLEELKT 327 (421)
T ss_dssp EEEECSHHHHTCGGGCCEEEECCSHHHHHHH----------HH-HHHHTTCSCCCHHHHHHHHHHHHHCH--HHHHHHHH
T ss_pred EEEEeChhhccCchhheEeEEcCCHHHHHHH----------HH-HHHhcccCCCCHHHHHHHHHHHhccH--HHHHHHHH
Confidence 556777899997775 888888 7776652 11 12224567899999998888887432 23677888
Q ss_pred HHHHHHHHHHHHHhccCCc---------cc-ccCCCCCcccHHHHHHHH-HccCccccC--CCC--CCccceeeccCCCH
Q psy8733 528 NSLQKSVLLYQEIDNSDKF---------YE-CPVQAGFPLDELFLKEAK-AHNMIQLKG--HRL--VGGIRASIYNAITV 592 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~~~~---------~~-~~v~~~~~~~~~~~~~~~-~~~i~~~~g--~~~--~~~~r~~~~~a~~~ 592 (621)
+.+++.+.+.+.+++.+++ +. ..+.+......+|.+.+. ++||....| ++. .+.||++ ++ ++.
T Consensus 328 ~~~~~~~~l~~~L~~~~~i~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~-~~-~~~ 405 (421)
T 3l8a_A 328 VIEGNIKLVIKELEAKTKIKVMEPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLN-VA-TPK 405 (421)
T ss_dssp HHHHHHHHHHHHHHHHCSCEEECCSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEE-CC-SCH
T ss_pred HHHHHHHHHHHHHHhCCCceEeCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEE-ec-CCH
Confidence 8888999999999875432 11 111100012345777775 569986554 433 5679998 33 799
Q ss_pred HHHHHHHHHHHHHH
Q psy8733 593 DEAVILVKFMKEFR 606 (621)
Q Consensus 593 ~~~~~l~~~~~~~~ 606 (621)
|+++++++-|++.-
T Consensus 406 ~~i~~~l~~l~~~l 419 (421)
T 3l8a_A 406 NTVQEALSRIISVF 419 (421)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHH
Confidence 99999988887653
No 327
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=58.66 E-value=3.9 Score=41.63 Aligned_cols=139 Identities=6% Similarity=-0.062 Sum_probs=93.4
Q ss_pred HHHHhhcccccccCC--cEEee-ecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 450 GVIIAGAQKNIGPAG--ITVVI-VREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 450 ~~~~a~~qk~~GpaG--l~v~i-v~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
+++..|..|.+|++| ++.++ .+++++++..+ .. + ..++|.++.+.+...|+. ...++.+.
T Consensus 208 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~----------~~---~-~~~~~~~~~~~~~~~l~~---~~~~~~~~ 270 (364)
T 1lc5_A 208 IWVLRSLTKFYAIPGLRLGYLVNSDDAAMARMRR----------QQ---M-PWSVNALAALAGEVALQD---SAWQQATW 270 (364)
T ss_dssp EEEEEESTTTTTCTTTCCEEEECCCHHHHHHHHH----------HS---C-TTCSCHHHHHHHHHGGGC---HHHHHHHH
T ss_pred EEEEEECchhhcCCccceEEEEECCHHHHHHHHH----------hC---C-CCCCCHHHHHHHHHHHhC---cHHHHHHH
Confidence 456678899999778 58888 89998765321 11 1 236888888887777664 23577788
Q ss_pred HHHHHHHHHHHHHHhccCCcccccCCCCC----c---ccHHHHHHHHHccCccccC--CCC--CCccceeeccCCCHHHH
Q psy8733 527 QNSLQKSVLLYQEIDNSDKFYECPVQAGF----P---LDELFLKEAKAHNMIQLKG--HRL--VGGIRASIYNAITVDEA 595 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~~~~~~~v~~~~----~---~~~~~~~~~~~~~i~~~~g--~~~--~~~~r~~~~~a~~~~~~ 595 (621)
++.+++.+.+.+.+++.+++-..+ ..+. + -...|.+.+.++||....| |.. .+.||++. .+.+|+
T Consensus 271 ~~~~~~~~~l~~~L~~~~~~~~~~-~~g~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~---~~~~~~ 346 (364)
T 1lc5_A 271 HWLREEGARFYQALCQLPLLTVYP-GRANYLLLRCEREDIDLQRRLLTQRILIRSCANYPGLDSRYYRVAI---RSAAQN 346 (364)
T ss_dssp HHHHHHHHHHHHHHHTSTTEEECC-CSSSEEEEEESCTTCCHHHHHHTTTEECEECTTSTTCCTTEEEEEC---CCHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCEECC-CCCeEEEEECCCcHHHHHHHHHHCCcEEeeCcccCCCCCCEEEEEe---CCHHHH
Confidence 888889999999998765431111 1110 0 1235788888999986655 322 46699994 368899
Q ss_pred HHHHHHHHHHHHHc
Q psy8733 596 VILVKFMKEFRHKH 609 (621)
Q Consensus 596 ~~l~~~~~~~~~~~ 609 (621)
++|++.|+++.++.
T Consensus 347 ~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 347 ERLLAALRNVLTGI 360 (364)
T ss_dssp HHHHHHHHHHC---
T ss_pred HHHHHHHHHHhhcc
Confidence 99999998886554
No 328
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=57.71 E-value=12 Score=40.47 Aligned_cols=155 Identities=9% Similarity=-0.017 Sum_probs=101.7
Q ss_pred HHHHhhcccc-cccCCcEEeeecHhHhhhcCCCCCceeeeee-cccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 450 GVIIAGAQKN-IGPAGITVVIVREDLLEYALPITPTVFHFKI-NADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 450 ~~~~a~~qk~-~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~-~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
|++..+.+|. +||-|+++++++++.+....... ..+|.. .........|++...+..+...++.+.+. |++.+.+
T Consensus 304 d~~~~s~~K~l~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~-~~~~~~~ 380 (514)
T 3mad_A 304 TSVSADTHKYGYGAKGTSVILYRRPDLLHYQYFI--AADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEE-GYLDATR 380 (514)
T ss_dssp CEEEECTTTTTCCCSSCEEEEESSHHHHTTTCEE--ESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHH-HHHHHHH
T ss_pred cEEEECchhccCCCCCeEEEEEeCHHHhcccccc--ccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHH-HHHHHHH
Confidence 5566788898 45889999999998875432100 000000 01122345577777666666666666543 4888889
Q ss_pred HHHHHHHHHHHHHhccCCcccccCCC------CCc-ccHHHHHHHHHccCccccCCCCCCccceeec-cCCCHHHHHHHH
Q psy8733 528 NSLQKSVLLYQEIDNSDKFYECPVQA------GFP-LDELFLKEAKAHNMIQLKGHRLVGGIRASIY-NAITVDEAVILV 599 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~~~~~~~~v~~------~~~-~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~-~a~~~~~~~~l~ 599 (621)
+..+.++.+++.|++.+++-...-.. ... ...++.+.+.++||+. .|++.-+.+|++.- +.++.|++++++
T Consensus 381 ~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~v-~g~~~~~~~Ri~~~~~~~~~e~i~~~l 459 (514)
T 3mad_A 381 RILQAADRLKAGVRAIPSLKILGDPLWVIAVASDELNIYQVMEEMAGRGWRL-NGLHRPPAFHVALTLRHTEPGVVDRFL 459 (514)
T ss_dssp HHHHHHHHHHHHHHTSTTCEESSCCSSEEEEECSSSCHHHHHHHHHTTTCBC-EEETTTTEEEEECCGGGGSTTHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCeEEeCCCeEEEEEeCCCCCHHHHHHHHHhcCCEe-ccCCCCCeEEEEEecCCCCHHHHHHHH
Confidence 99999999999999876532111001 011 2356889999999886 77766677999986 455668999888
Q ss_pred HHHHHHHHH
Q psy8733 600 KFMKEFRHK 608 (621)
Q Consensus 600 ~~~~~~~~~ 608 (621)
+.|++..++
T Consensus 460 ~~L~~~l~~ 468 (514)
T 3mad_A 460 ADLQDAVAQ 468 (514)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888876643
No 329
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=57.56 E-value=4.2 Score=41.68 Aligned_cols=133 Identities=15% Similarity=0.164 Sum_probs=88.4
Q ss_pred HhhcccccccCCc--EEeee---cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHH--h--cCChH
Q psy8733 453 IAGAQKNIGPAGI--TVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK--R--QGGLA 523 (621)
Q Consensus 453 ~a~~qk~~GpaGl--~v~iv---~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~--~--~gg~~ 523 (621)
..|..|.+|++|+ +.+++ ++++++.... . .+. ....++.+||.++.+++...|+... + ...++
T Consensus 238 ~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~---~---~~~--~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~ 309 (394)
T 2ay1_A 238 AASCSKNFGIYRERTGCLLALCADAATRELAQG---A---MAF--LNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELE 309 (394)
T ss_dssp EEECTTTTTCGGGCEEEEEEECSSHHHHHHHHH---H---HHH--HHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred EEeccCCCcCcCCccceEEEEeCCHHHHHHHHH---H---HHH--HHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHH
Confidence 3456799998886 88887 6766543110 0 011 1234677788898888888876431 0 12577
Q ss_pred HHHHHHHHHHHHHHHHHhccC------------CcccccCCCCCccc-HHHHHHHHHccCccccCCCCCCccceeeccCC
Q psy8733 524 KMEQNSLQKSVLLYQEIDNSD------------KFYECPVQAGFPLD-ELFLKEAKAHNMIQLKGHRLVGGIRASIYNAI 590 (621)
Q Consensus 524 ~~~~~~~~ka~~lY~~id~~~------------~~~~~~v~~~~~~~-~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~ 590 (621)
.+.++.+++.+.+++.+++.. ++|... ++. +.+.+.++++||....| +|++ |..+
T Consensus 310 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~g~~~~~-----~~~~~~~~~~l~~~gi~v~~~------~Ris-~~~~ 377 (394)
T 2ay1_A 310 AVRSGMLRLREQLAGELRDLSGSDRFGFVAEHRGMFSRL-----GATPEQVKRIKEEFGIYMVGD------SRIN-IAGL 377 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSSTTTHHHHCCSSEEEC-----CCCHHHHHHHHHHHCEECCTT------CEEE-GGGC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCeeEEcCCceEEEee-----CCCHHHHHHHHHhCCEEecCC------CeEE-eecC
Confidence 888888889999998887532 222111 222 34667778899987653 7998 5568
Q ss_pred CHHHHHHHHHHHHHH
Q psy8733 591 TVDEAVILVKFMKEF 605 (621)
Q Consensus 591 ~~~~~~~l~~~~~~~ 605 (621)
+.|+++.+++.|++.
T Consensus 378 ~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 378 NDNTIPILARAIIEV 392 (394)
T ss_dssp CTTTHHHHHHHHHHH
T ss_pred CHhhHHHHHHHHHHc
Confidence 999999999988764
No 330
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=57.37 E-value=6.6 Score=40.97 Aligned_cols=143 Identities=11% Similarity=0.042 Sum_probs=97.5
Q ss_pred HHHhhcccccccCC--cEEeee---cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHH----HHHhcCC
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFA----WIKRQGG 521 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv---~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~----~~~~~gg 521 (621)
++..|..|.+|+.| ++.+++ ++++++.... ... ....++..++|.++.+++...|+ |+++
T Consensus 264 i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~-------~~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~--- 332 (430)
T 2x5f_A 264 IRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEA-------KVK-GLIRSNISSGPLPTQSAVKHVLKNNKQFDKE--- 332 (430)
T ss_dssp EEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHH-------HHH-HHHHTTTSSCCHHHHHHHHHHHHSCHHHHHH---
T ss_pred EEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHH-------HHh-hhhhcccCCCChHHHHHHHHHHccChHHHHH---
Confidence 44567899999778 589999 9988765321 010 00012345688999999999998 6663
Q ss_pred hHHHHHHHHHHHHHHHHHHhc----cC--------CcccccCCCCCcccHHHHHHHHH-ccCccccCCCCCCccceeecc
Q psy8733 522 LAKMEQNSLQKSVLLYQEIDN----SD--------KFYECPVQAGFPLDELFLKEAKA-HNMIQLKGHRLVGGIRASIYN 588 (621)
Q Consensus 522 ~~~~~~~~~~ka~~lY~~id~----~~--------~~~~~~v~~~~~~~~~~~~~~~~-~~i~~~~g~~~~~~~r~~~~~ 588 (621)
++.+.++.+++.+.+.+.+++ .. +||...--++ .-..+|.+.+.+ +||....| ..+.||++. .
T Consensus 333 ~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g--~~~~iRis~-~ 408 (430)
T 2x5f_A 333 IEQNIQTLKERYEVTKEVVYADQYHSHWQAYDFNSGYFMAIKVHD-VDPEALRKHLIDKYSIGVIAL--NATDIRIAF-S 408 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCGGGTTTEEECCCCBSSEEEEEESS-SCHHHHHHHHHHHHCEECEEC--SSSEEEEEG-G
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCceeeCCCceEEEEeCCCC-CCHHHHHHHHHHhCCEEEecC--CCCeEEEEE-e
Confidence 667888899999999999983 21 1211100000 123458888887 99998776 346799984 4
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q psy8733 589 AITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 589 a~~~~~~~~l~~~~~~~~~~ 608 (621)
..+.|+++.+++-|+++.++
T Consensus 409 ~~~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 409 CVEKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp GSCGGGHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHh
Confidence 46999999999998887654
No 331
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=57.20 E-value=2.2 Score=43.76 Aligned_cols=140 Identities=10% Similarity=0.015 Sum_probs=90.0
Q ss_pred HHHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 449 FGVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
.+++..|..|.+|++| ++.+++++++++...+ .....++ ++|.+..+.+...|+.. ...++.+.
T Consensus 227 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~-----------~~~~~~~-~~~~~~~~a~~~~l~~~--~~~~~~~~ 292 (386)
T 1u08_A 227 RAVAVSSFGKTYHMTGWKVGYCVAPAPISAEIRK-----------VHQYLTF-SVNTPAQLALADMLRAE--PEHYLALP 292 (386)
T ss_dssp TEEEEEEHHHHTTCGGGCCEEEECCHHHHHHHHH-----------HHHHHTS-SCCHHHHHHHHHHHHHC--THHHHTHH
T ss_pred cEEEEecchhhcCCcccceEEEEcCHHHHHHHHH-----------HHHhhcc-CCChHHHHHHHHHHhCC--cHHHHHHH
Confidence 4566778899999888 8999999998765321 1111123 45566666666666543 23477788
Q ss_pred HHHHHHHHHHHHHHhccC--------Cccccc-CCCCC-cccHHHHHHH-HHccCccccC--CC----CCCccceeeccC
Q psy8733 527 QNSLQKSVLLYQEIDNSD--------KFYECP-VQAGF-PLDELFLKEA-KAHNMIQLKG--HR----LVGGIRASIYNA 589 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~--------~~~~~~-v~~~~-~~~~~~~~~~-~~~~i~~~~g--~~----~~~~~r~~~~~a 589 (621)
++.+++.+.+++.+++.. ++|... +.+.. ....+|.+.+ +++||....| |. ..+.||++.-
T Consensus 293 ~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~-- 370 (386)
T 1u08_A 293 DFYRQKRDILVNALNESRLEILPCEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFA-- 370 (386)
T ss_dssp HHHHHHHHHHHHHTTSSSCEECCCCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECC--
T ss_pred HHHHHHHHHHHHHHHHCCCeecCCCceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEc--
Confidence 889999999999998641 122111 11000 1234576655 5789986544 43 2456999974
Q ss_pred CCHHHHHHHHHHHHH
Q psy8733 590 ITVDEAVILVKFMKE 604 (621)
Q Consensus 590 ~~~~~~~~l~~~~~~ 604 (621)
.+.|+++.+++-|++
T Consensus 371 ~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 371 KKESTLLAAAERLRQ 385 (386)
T ss_dssp SCHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHhh
Confidence 589999998887764
No 332
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=56.03 E-value=9.3 Score=38.89 Aligned_cols=134 Identities=9% Similarity=0.083 Sum_probs=92.9
Q ss_pred HHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
++..|..|.+|++| ++.+++++++++...+. ...+ ++|.+..+.+...|+. ...++.+.++
T Consensus 224 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~-------------~~~~-~~~~~~~~a~~~~l~~---~~~~~~~~~~ 286 (369)
T 3cq5_A 224 VVSRTMSKAFDFAGGRLGYFVANPAFIDAVMLV-------------RLPY-HLSALSQAAAIVALRH---SADTLGTVEK 286 (369)
T ss_dssp EEEEESSSTTSCGGGCCEEEEECTHHHHHHHTT-------------SCTT-CSCHHHHHHHHHHHHT---HHHHHTHHHH
T ss_pred EEEEechHhcCCcccceEEEEeCHHHHHHHHHc-------------CCCC-CCCHHHHHHHHHHhcC---HHHHHHHHHH
Confidence 55677899999778 59999999987653221 1122 5888888877777764 2346778888
Q ss_pred HHHHHHHHHHHHhccCCcccccCCCC------C-cccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHHHHH
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPVQAG------F-PLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKF 601 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v~~~------~-~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~~~ 601 (621)
.+++.+.+.+.+++. ++-..+ ..+ . ....+|.+.+.++||....| +..+.||++.= +.+|++.+++.
T Consensus 287 ~~~~~~~l~~~L~~~-g~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~-~~~~~iRis~~---~~~~i~~~~~~ 360 (369)
T 3cq5_A 287 LSVERVRVAARLEEL-GYAVVP-SESNFVFFGDFSDQHAAWQAFLDRGVLIRDV-GIAGHLRTTIG---VPEENDAFLDA 360 (369)
T ss_dssp HHHHHHHHHHHHHHH-TCEEEC-CSSSEEEEECCSSHHHHHHHHHHTTEECBCC-SCTTEEEEECC---CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCEECC-CCCeEEEEECCCCHHHHHHHHHHCCEEEEEC-CCCCeEEEEeC---CHHHHHHHHHH
Confidence 889999999999763 221111 000 0 12355888889999987766 34567999853 89999999999
Q ss_pred HHHHHH
Q psy8733 602 MKEFRH 607 (621)
Q Consensus 602 ~~~~~~ 607 (621)
|+++.+
T Consensus 361 l~~~~~ 366 (369)
T 3cq5_A 361 AAEIIK 366 (369)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 988753
No 333
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=55.86 E-value=9.4 Score=41.12 Aligned_cols=156 Identities=9% Similarity=0.053 Sum_probs=99.1
Q ss_pred HHHHHhhccccc-ccCCcEEeeecHhHhhhcCCC--CCceeeeeec---ccCCCccCCCchhHHHHHHHHHHHHHhcCCh
Q psy8733 449 FGVIIAGAQKNI-GPAGITVVIVREDLLEYALPI--TPTVFHFKIN---ADNNSVYNTPPTFVVHVIQRVFAWIKRQGGL 522 (621)
Q Consensus 449 ~~~~~a~~qk~~-GpaGl~v~iv~~~~l~~~~~~--~p~~~~y~~~---~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~ 522 (621)
.|++..|.+|.| ||-| ++++++++++. ..+. .....++... ........||+...+..+...++++.+. ++
T Consensus 247 ~div~~s~~K~l~Gprg-G~i~~~~~~~~-~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~-~~ 323 (483)
T 1rv3_A 247 CHVVTTTTHKTLRGCRA-GMIFYRRGVRS-VDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTP-EF 323 (483)
T ss_dssp CSEEEEESSGGGCCCSC-EEEEEECSBCC--------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSH-HH
T ss_pred CcEEEecCcccCCCCCc-eEEEEcchhhh-hccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhCh-hH
Confidence 366778889988 6999 99999987542 0000 0000000000 0111236789998888888888877533 57
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcccc-cCCC--------CC-c-ccHHHHHHHHHccCccc----cCCCC---CCccce
Q psy8733 523 AKMEQNSLQKSVLLYQEIDNSDKFYEC-PVQA--------GF-P-LDELFLKEAKAHNMIQL----KGHRL---VGGIRA 584 (621)
Q Consensus 523 ~~~~~~~~~ka~~lY~~id~~~~~~~~-~v~~--------~~-~-~~~~~~~~~~~~~i~~~----~g~~~---~~~~r~ 584 (621)
+.+.++..+.++.+++.|.+. ++-.. +-.. .. . ..+.+.+.++++||... .|... .++||+
T Consensus 324 ~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~~pg~~~~~~~~~iRi 402 (483)
T 1rv3_A 324 KEYQRQVVANCRALSAALVEL-GYKIVTGGSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNTCPGDKSALRPSGLRL 402 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEECCSSCSCTTSCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhc-CCEeccCCCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCCCCCCCcCCCCceEEe
Confidence 889999999999999999875 32110 1000 00 1 12447788888999876 45422 467999
Q ss_pred eeccCCC----HHHHHHHHHHHHHHHHH
Q psy8733 585 SIYNAIT----VDEAVILVKFMKEFRHK 608 (621)
Q Consensus 585 ~~~~a~~----~~~~~~l~~~~~~~~~~ 608 (621)
+.-..++ .||++.+++.|+++.+.
T Consensus 403 s~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 403 GTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp ECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 9643233 89999999999987754
No 334
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=55.25 E-value=3.5 Score=42.84 Aligned_cols=142 Identities=13% Similarity=0.103 Sum_probs=95.6
Q ss_pred HHHHHhhcccccccCC--cEEeeecH-hHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHH
Q psy8733 449 FGVIIAGAQKNIGPAG--ITVVIVRE-DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKM 525 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaG--l~v~iv~~-~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~ 525 (621)
.|++..|..|.+|++| ++.++.++ ++++... ... ... . ++|.+..+.+...|+.. ..+++.+
T Consensus 235 ~~i~~~s~sK~~g~~G~r~G~~~~~~~~l~~~l~----------~~~-~~~-~-~~~~~~~~a~~~~l~~~--~~~~~~~ 299 (409)
T 2gb3_A 235 KVVVIDSVSKKFSACGARVGCLITRNEELISHAM----------KLA-QGR-L-APPLLEQIGSVGLLNLD--DSFFDFV 299 (409)
T ss_dssp TEEEEEESTTTTTCGGGCCEEEECSCHHHHHHHH----------HHH-HHS-C-CCCHHHHHHHHHHHTCC--HHHHHHH
T ss_pred CEEEEecchhccCCccceEEEEEECcHHHHHHHH----------HHH-hcc-C-CCCHHHHHHHHHHHhcc--HHHHHHH
Confidence 3667778899999888 89999998 8876532 111 111 2 78888887776666431 2246777
Q ss_pred HHHHHHHHHHHHHHHhccCCcccccCCC--C--------CcccHHHHHHHHHc------cCccccC--CCC-----CCcc
Q psy8733 526 EQNSLQKSVLLYQEIDNSDKFYECPVQA--G--------FPLDELFLKEAKAH------NMIQLKG--HRL-----VGGI 582 (621)
Q Consensus 526 ~~~~~~ka~~lY~~id~~~~~~~~~v~~--~--------~~~~~~~~~~~~~~------~i~~~~g--~~~-----~~~~ 582 (621)
.++.+++.+.+.+.+++. ++ ..++.+ + ..-..+|.+.+.++ ||....| ++. .+.|
T Consensus 300 ~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~i 377 (409)
T 2gb3_A 300 RETYRERVETVLKKLEEH-GL-KRFTKPSGAFYITAELPVEDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEI 377 (409)
T ss_dssp HHHHHHHHHHHHHHHHHT-TC-CCBCCCSBSSEEEEECSSSCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEE
T ss_pred HHHHHHHHHHHHHHHHHc-Cc-eeeeCCCeeEEEEEEeCCCCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEE
Confidence 888889999999999865 32 110111 1 01235578888776 9986655 332 4569
Q ss_pred ceeeccCCCHHHHHHHHHHHHHHHHHc
Q psy8733 583 RASIYNAITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 583 r~~~~~a~~~~~~~~l~~~~~~~~~~~ 609 (621)
|++ |+ ++.|+++.+++-|+++.++.
T Consensus 378 Ris-~~-~~~e~i~~~~~~l~~~l~~~ 402 (409)
T 2gb3_A 378 RIA-CV-LEKDLLSRAIDVLMEGLKMF 402 (409)
T ss_dssp EEE-CC-SCHHHHHHHHHHHHHHHHHH
T ss_pred EEE-eC-CCHHHHHHHHHHHHHHHHHh
Confidence 998 44 99999999999888877654
No 335
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=54.56 E-value=10 Score=40.02 Aligned_cols=156 Identities=18% Similarity=0.105 Sum_probs=97.3
Q ss_pred HHHHHhhccccc-ccCCcEEeeecHh-HhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 449 FGVIIAGAQKNI-GPAGITVVIVRED-LLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 449 ~~~~~a~~qk~~-GpaGl~v~iv~~~-~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
.|++-.+.+|.+ ||-|++++++|+. ++.+.....|..+.+. ....+.-.|++...+..+...++.+... |++.+.
T Consensus 253 ~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~r~~~~~~~~~aal~~lg~~-g~~~~~ 329 (452)
T 2dgk_A 253 VKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQ--IGTFAINFSRPAGQVIAQYYEFLRLGRE-GYTKVQ 329 (452)
T ss_dssp EEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCC--EEECCSCCSCBCHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred CcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCC--CCCcccCCCChhHHHHHHHHHHHHHhHH-HHHHHH
Confidence 456667889966 4889999999864 4433222222222110 0112233455554444444456655443 588889
Q ss_pred HHHHHHHHHHHHHHhccCCcccc-cC-------------CCCC--ccc-HHHHHHHHHccCcccc----C-CCCCCccce
Q psy8733 527 QNSLQKSVLLYQEIDNSDKFYEC-PV-------------QAGF--PLD-ELFLKEAKAHNMIQLK----G-HRLVGGIRA 584 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~~~~~~-~v-------------~~~~--~~~-~~~~~~~~~~~i~~~~----g-~~~~~~~r~ 584 (621)
++..+.++.+++.|.+.++|-.. +- .+.. ..+ ..+.+.+.++||.... + +...+.+|+
T Consensus 330 ~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~l~~~L~~~Gi~v~~~~~~~~~~~~~~lRi 409 (452)
T 2dgk_A 330 NASYQVAAYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFTLGGEATDIVVMRI 409 (452)
T ss_dssp HHHHHHHHHHHHHHHTTSSEEEEEECCTTTBSSEEEEEECTTCCCSCCHHHHHHHHHHTTCBCCEEECSTTCTTCEEEEE
T ss_pred HHHHHHHHHHHHHHHhCCCeEEecCCCCCCCeEEEEEEecCcccccCCHHHHHHHHHhcCCeeeeeeCCcccCCeEEEEE
Confidence 99999999999999987653111 10 0000 123 6788999999986321 1 111345999
Q ss_pred eeccCCCHHHHHHHHHHHHHHHH
Q psy8733 585 SIYNAITVDEAVILVKFMKEFRH 607 (621)
Q Consensus 585 ~~~~a~~~~~~~~l~~~~~~~~~ 607 (621)
+.-+.+|.||++.|++-|++..+
T Consensus 410 s~~~~~t~e~id~li~~l~~~~~ 432 (452)
T 2dgk_A 410 MCRRGFEMDFAELLLEDYKASLK 432 (452)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHH
T ss_pred EecCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999887654
No 336
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=54.27 E-value=4.5 Score=41.53 Aligned_cols=143 Identities=8% Similarity=-0.014 Sum_probs=91.2
Q ss_pred HHHhhcccccccCC--cEEeeec-HhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~-~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
++..|..|.+|++| ++.++++ +++++...+ .....++.|+|.++.+.+...|+.. ...++.+.+
T Consensus 231 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~-----------~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~ 297 (399)
T 1c7n_A 231 ITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTK-----------SRDATSGMPFTTLGYKACEICYKEC--GKWLDGCIK 297 (399)
T ss_dssp EEEECSHHHHTCGGGCCEEEECCCHHHHHHHHH-----------HHHHTTCCCCCHHHHHHHHHHHHHC--HHHHHHHHH
T ss_pred EEEEeChhhccccchheEEEEECCHHHHHHHHH-----------HHhhcccCCCCHHHHHHHHHHHhCC--hHHHHHHHH
Confidence 45677889999778 5888886 567665311 1112235578899888887777642 124677788
Q ss_pred HHHHHHHHHHHHHhc-cCCc---------ccc-cCCCCCcccHHHHHHHH-HccCccccCC--C--CCCccceeeccCCC
Q psy8733 528 NSLQKSVLLYQEIDN-SDKF---------YEC-PVQAGFPLDELFLKEAK-AHNMIQLKGH--R--LVGGIRASIYNAIT 591 (621)
Q Consensus 528 ~~~~ka~~lY~~id~-~~~~---------~~~-~v~~~~~~~~~~~~~~~-~~~i~~~~g~--~--~~~~~r~~~~~a~~ 591 (621)
+.+++.+.+.+.+++ .+++ +.. .+.+.......|.+.+. ++||....|. + ..+.||++.= .+
T Consensus 298 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~ 375 (399)
T 1c7n_A 298 VIDKNQRIVKDFFEVNHPEIKAPLIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLA--AP 375 (399)
T ss_dssp HHHHHHHHHHHHHHHHCTTSBCCCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECC--SC
T ss_pred HHHHHHHHHHHHHHhhCCCCeEecCCceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEec--cC
Confidence 888999999999987 4432 110 11100012345788886 7899976653 3 2567999863 34
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy8733 592 VDEAVILVKFMKEFRHK 608 (621)
Q Consensus 592 ~~~~~~l~~~~~~~~~~ 608 (621)
.|+++.+++-|++..++
T Consensus 376 ~~~l~~~l~~l~~~l~~ 392 (399)
T 1c7n_A 376 SSVIQESLERLNKALKD 392 (399)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 78887777766665544
No 337
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=54.10 E-value=9.6 Score=41.19 Aligned_cols=140 Identities=14% Similarity=0.155 Sum_probs=90.4
Q ss_pred HHhhccccc-ccCCc--EEeee---cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHH-----------
Q psy8733 452 IIAGAQKNI-GPAGI--TVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFA----------- 514 (621)
Q Consensus 452 ~~a~~qk~~-GpaGl--~v~iv---~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~----------- 514 (621)
++.|.-|.+ |++|+ +.+++ ++++++... ... +++-+||+++.+++..+|+
T Consensus 311 ~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~----------~~~---~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 377 (500)
T 3tcm_A 311 SYQSVSKGYYGECGKRGGYFEITGFSAPVREQIY----------KIA---SVNLCSNITGQILASLVMNPPKASDESYAS 377 (500)
T ss_dssp EEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHH----------HHH---HTTCCCCHHHHHHHHHHHSCCCSSSTHHHH
T ss_pred EEecCCccCCCCCccceEEEEEeCCCHHHHHHHH----------HHH---hcccCCCHHHHHHHHHHhcCccccchhHHH
Confidence 345778999 87775 55666 788876631 111 3556789999999998885
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHHHhccCCcccccCCC-C---C---cc---------------cHHH-HHHHHHccCc
Q psy8733 515 WIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQA-G---F---PL---------------DELF-LKEAKAHNMI 571 (621)
Q Consensus 515 ~~~~~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~~v~~-~---~---~~---------------~~~~-~~~~~~~~i~ 571 (621)
|.++ ++.+.++-+++++.+++.+.+.+++ .+.... + . ++ +..+ .+.++++||.
T Consensus 378 ~~~~---~~~~~~~l~~~~~~l~~~L~~~~g~-~~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~ 453 (500)
T 3tcm_A 378 YKAE---KDGILASLARRAKALEHAFNKLEGI-TCNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIV 453 (500)
T ss_dssp HHHH---HHHHHHHHHHHHHHHHHHHHTSTTE-ECCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEE
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHhcCCCc-EEecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEE
Confidence 6664 5677888899999999999887542 221111 1 0 01 2222 4677788998
Q ss_pred ccc--CCCC---CCccceeeccCCCHHHH----HHHHHHHHHHHHHcC
Q psy8733 572 QLK--GHRL---VGGIRASIYNAITVDEA----VILVKFMKEFRHKHS 610 (621)
Q Consensus 572 ~~~--g~~~---~~~~r~~~~~a~~~~~~----~~l~~~~~~~~~~~~ 610 (621)
... +++. .+.||++.= ++.|++ ++|.+|+++|.+++.
T Consensus 454 v~pg~~f~~~~g~~~iRis~~--~~~e~i~~~i~~l~~~~~~~~~~~~ 499 (500)
T 3tcm_A 454 VVPGSGFGQVPGTWHFRCTIL--PQEDKIPAVISRFTVFHEAFMSEYR 499 (500)
T ss_dssp CEESTTTCCCTTCCBEEEESC--SCTTTHHHHHHHHHHHHHHHHHHHC
T ss_pred EEeCcccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 554 4442 335999976 666665 455556666666553
No 338
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=53.94 E-value=18 Score=36.52 Aligned_cols=144 Identities=14% Similarity=0.101 Sum_probs=94.2
Q ss_pred HHHhhcccccccCCc--EEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 451 VIIAGAQKNIGPAGI--TVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 451 ~~~a~~qk~~GpaGl--~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
++..|..|.+|.+|+ +.++.+++++++... .... +..++|.+..+++...|+...+ .++.+.++
T Consensus 215 i~~~s~sK~~~~~G~r~G~v~~~~~l~~~~~~-----------~~~~-~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~ 280 (375)
T 3op7_A 215 IAVNSLSKTYSLPGIRIGWVAANHQVTDILRD-----------YRDY-TMICAGVFDDLVAQLALAHYQE--ILERNRHI 280 (375)
T ss_dssp EEEEESSSSSSCGGGCCEEEECCHHHHHHHTT-----------TGGG-TTSCCCHHHHHHHHHHHHTHHH--HHHHHHHH
T ss_pred EEEeEChhhcCCcccceEEEEeCHHHHHHHHH-----------HHhh-hccCCCcHHHHHHHHHHhccHH--HHHHHHHH
Confidence 456677899996674 888889999877432 1112 2344567777777777764332 35677777
Q ss_pred HHHHHHHHHHHHhccCCcccccCCC--------CCc-ccHHHHHHH-HHccCccccC--CCCCCccceeeccCCCHHHHH
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPVQA--------GFP-LDELFLKEA-KAHNMIQLKG--HRLVGGIRASIYNAITVDEAV 596 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v~~--------~~~-~~~~~~~~~-~~~~i~~~~g--~~~~~~~r~~~~~a~~~~~~~ 596 (621)
.+++.+.+.+.+++.+++-...... ... ...+|.+.+ +++||....| ++..+.||++. +.+.|+++
T Consensus 281 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~~~~~iRi~~--~~~~~~i~ 358 (375)
T 3op7_A 281 LEENLAILDQWIEEEPLVSYIRPAVVSTSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFERDGYVRLGF--ACEQETLI 358 (375)
T ss_dssp HHHHHHHHHHHHHHCTTEEECCCSSSSCEEEEECCSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEECC--CSCHHHHH
T ss_pred HHHHHHHHHHHHhhCCCceEecCCCeEEEeEEcCCCCCHHHHHHHHHHhCCEEEeChhhhCCCCeEEEEe--cCCHHHHH
Confidence 7889999999998865431111111 011 235576666 7899986444 45577899993 45668899
Q ss_pred HHHHHHHHHHHHcC
Q psy8733 597 ILVKFMKEFRHKHS 610 (621)
Q Consensus 597 ~l~~~~~~~~~~~~ 610 (621)
.+++-|+++.++..
T Consensus 359 ~~l~~l~~~l~~~~ 372 (375)
T 3op7_A 359 KGLEKLSQFLRRFD 372 (375)
T ss_dssp HHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHh
Confidence 88888888776543
No 339
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=53.12 E-value=8.2 Score=39.28 Aligned_cols=137 Identities=12% Similarity=0.107 Sum_probs=90.9
Q ss_pred HHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 450 GVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 450 ~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
+++..|..|.+|++| ++.++.++++++...+ . .+.+ ++|.++.+.+...|+..... .++.+.+
T Consensus 206 ~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~----------~---~~~~-~~~~~~~~a~~~~l~~~~~~-~~~~~~~ 270 (356)
T 1fg7_A 206 LAILRTLSKAFALAGLRCGFTLANEEVINLLMK----------V---IAPY-PLSTPVADIAAQALSPQGIV-AMRERVA 270 (356)
T ss_dssp EEEEEESSSTTCCGGGCCEEEEECHHHHHHHHH----------H---SCSS-CSCHHHHHHHHHHTSHHHHH-HHHHHHH
T ss_pred EEEEecchHhhcCchhhhEEEEeCHHHHHHHHH----------h---cCCC-CCCHHHHHHHHHHhcCccHH-HHHHHHH
Confidence 345567889999888 6999999998765321 1 1223 67788777766666532100 1677888
Q ss_pred HHHHHHHHHHHHHhccCCcccccCCCCC----c--ccHHHHHHHHHccCcccc-C--CCCCCccceeeccCCCHHHHHHH
Q psy8733 528 NSLQKSVLLYQEIDNSDKFYECPVQAGF----P--LDELFLKEAKAHNMIQLK-G--HRLVGGIRASIYNAITVDEAVIL 598 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~~~~~~~~v~~~~----~--~~~~~~~~~~~~~i~~~~-g--~~~~~~~r~~~~~a~~~~~~~~l 598 (621)
+.+++.+.+++.+++.+++.......+. + -..+|.+.++++||.... | ++..+.||++.= +.+|+++|
T Consensus 271 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~g~~~~~~~~iRis~~---~~~e~~~~ 347 (356)
T 1fg7_A 271 QIIAEREYLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVG---TREESQRV 347 (356)
T ss_dssp HHHHHHHHHHHHHHHSTTEEEECCCSSSEEEEEETTHHHHHHHHHHTTEECEECTTSTTCTTEEEEECC---CHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCceEECCCCCeEEEEECCCHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEeC---CHHHHHHH
Confidence 8888999999999876532211111110 1 134588888999998655 4 344567999962 68999999
Q ss_pred HHHHHH
Q psy8733 599 VKFMKE 604 (621)
Q Consensus 599 ~~~~~~ 604 (621)
++.|++
T Consensus 348 ~~~l~~ 353 (356)
T 1fg7_A 348 IDALRA 353 (356)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 988865
No 340
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=53.04 E-value=9.7 Score=39.34 Aligned_cols=151 Identities=12% Similarity=0.080 Sum_probs=95.2
Q ss_pred HHHHHhhcccccccCCcEEeeec-HhHhhhcCCCCCcee----eeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChH
Q psy8733 449 FGVIIAGAQKNIGPAGITVVIVR-EDLLEYALPITPTVF----HFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLA 523 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~v~iv~-~~~l~~~~~~~p~~~----~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~ 523 (621)
.|++-++..|.+||.|+++++.+ ++++++..+...... .|+. ...+..+.|||+..++.+.. ++|+++
T Consensus 175 ~~~~s~s~~K~l~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~aa~~l~~-l~~l~~----- 247 (394)
T 1o69_A 175 FGVYSYNGNKIITTSGGGMLIGKNKEKIEKARFYSTQARENCLHYEH-LDYGYNYRLSNVLGAIGVAQ-MEVLEQ----- 247 (394)
T ss_dssp EEEEECCTTSSSCCSSCEEEEESCHHHHHHHHHHTBTCCCSSSSCCC-SSCCCBCBCCHHHHHHHHHH-HTTHHH-----
T ss_pred cEEEEEeCCccCCCCCceEEEECCHHHHHHHHHHHHhccccCccccc-cccCcccCcCHHHHHHHHHH-HHHHHH-----
Confidence 45556677899999999999996 787665321100000 0111 22233456899999888776 777653
Q ss_pred HHHHHHHHHHHHHHHHHhcc-----------CCccc--ccCCCCC-------------------c-ccHHHHHHHHHccC
Q psy8733 524 KMEQNSLQKSVLLYQEIDNS-----------DKFYE--CPVQAGF-------------------P-LDELFLKEAKAHNM 570 (621)
Q Consensus 524 ~~~~~~~~ka~~lY~~id~~-----------~~~~~--~~v~~~~-------------------~-~~~~~~~~~~~~~i 570 (621)
..++.++..+.+++.+.+. .+|+. ..+.++. . -...+.+.++++||
T Consensus 248 -~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI 326 (394)
T 1o69_A 248 -RVLKKREIYEWYKEFLGEYFSFLDELENSRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQI 326 (394)
T ss_dssp -HHHHHHHHHHHHHHHHTTTEECCCCCTTEECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTC
T ss_pred -HHHHHHHHHHHHHHHhcccccccCCCCCCcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCC
Confidence 4566677777888887652 12211 1111110 0 23458888999999
Q ss_pred ccccCCCC---------C-------------CccceeeccCCCHHHHHHHHHHHHHHHH
Q psy8733 571 IQLKGHRL---------V-------------GGIRASIYNAITVDEAVILVKFMKEFRH 607 (621)
Q Consensus 571 ~~~~g~~~---------~-------------~~~r~~~~~a~~~~~~~~l~~~~~~~~~ 607 (621)
..-.|+.. . .++|+..++.+|.||++.+++.|+++..
T Consensus 327 ~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~edi~~~~~~l~~~~~ 385 (394)
T 1o69_A 327 ETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTAMSKDDVYEISKLILKSIK 385 (394)
T ss_dssp CCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHC
T ss_pred cccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCCCCHHHHHHHHHHHHHHHh
Confidence 87666421 1 3466667899999999999999998864
No 341
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=52.73 E-value=11 Score=40.69 Aligned_cols=158 Identities=11% Similarity=0.046 Sum_probs=95.5
Q ss_pred HHHHHhhcccccc-cCCcEEeeecHhH-hhhcCCCCCceeeeeec-----ccCCCccCCCchhHHHHHHHHHHHHHhcCC
Q psy8733 449 FGVIIAGAQKNIG-PAGITVVIVREDL-LEYALPITPTVFHFKIN-----ADNNSVYNTPPTFVVHVIQRVFAWIKRQGG 521 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl~v~iv~~~~-l~~~~~~~p~~~~y~~~-----~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg 521 (621)
.|.+-++.+|.+| |-|.+++++++.- +.++....|..+.-... ....+.-.+-+ |.+.-+...|+.+.. .|
T Consensus 293 ~Ds~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~-~~~l~l~~al~~~g~-~g 370 (475)
T 3k40_A 293 ADSFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRR-FRALKLWFVLRLYGV-EN 370 (475)
T ss_dssp CSEEEECHHHHSSCCSSCEEEEESSGGGC---------------------------CCCGG-GTHHHHHHHHHHHHH-HH
T ss_pred CCEEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCc-ccHHHHHHHHHHHhH-HH
Confidence 4778889999997 9999999999764 44443333333311100 00011111111 344444455555543 35
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCcccccCCC----------C-CcccHHHHHHHHHccCccccCCCC--CCccceee-c
Q psy8733 522 LAKMEQNSLQKSVLLYQEIDNSDKFYECPVQA----------G-FPLDELFLKEAKAHNMIQLKGHRL--VGGIRASI-Y 587 (621)
Q Consensus 522 ~~~~~~~~~~ka~~lY~~id~~~~~~~~~v~~----------~-~~~~~~~~~~~~~~~i~~~~g~~~--~~~~r~~~-~ 587 (621)
++.+.++..+.++.+.+.|.+.++| ....++ + .....++.+.+.++|.+...+... .+.||++. .
T Consensus 371 ~~~~~~~~~~~a~~l~~~L~~~~g~-~l~~~~~~~iv~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~ 449 (475)
T 3k40_A 371 LQAHIRRHCNFAKQFGDLCVADSRF-ELAAEINMGLVCFRLKGSNERNEALLKRINGRGHIHLVPAKIKDVYFLRMAICS 449 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTE-EESSCCBTTEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCE-EEecCCceEEEEEEeCCchHHHHHHHHHHHhCCcEEEEeeEECCEEEEEEEeCC
Confidence 8899999999999999999988764 222111 1 124566888888888875443222 34599994 5
Q ss_pred cCCCHHHHHHHHHHHHHHHHHc
Q psy8733 588 NAITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 588 ~a~~~~~~~~l~~~~~~~~~~~ 609 (621)
|.++.|+++.+++-|+++.++.
T Consensus 450 ~~tt~~di~~~~~~i~~~~~~~ 471 (475)
T 3k40_A 450 RFTQSEDMEYSWKEVSAAADEM 471 (475)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 7789999999999999987653
No 342
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=52.10 E-value=14 Score=37.18 Aligned_cols=134 Identities=12% Similarity=0.075 Sum_probs=93.4
Q ss_pred HHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
++..|..|. |++| ++.++.+++++++..+ .. + ..++|.++.+.+...|+. ...++.+.++
T Consensus 220 i~~~s~sK~-~~~G~r~G~~~~~~~~~~~~~~----------~~---~-~~~~~~~~~~a~~~~l~~---~~~~~~~~~~ 281 (367)
T 3euc_A 220 LVMRTVSKL-GLAGIRLGYVAGDPQWLEQLDK----------VR---P-PYNVNVLTEATALFALEH---VAVLDEQAAQ 281 (367)
T ss_dssp EEEEECCCT-TSCSCCEEEEEECHHHHHHHGG----------GC---C-SSCCCHHHHHHHHHHHTT---HHHHHHHHHH
T ss_pred EEEecchhh-cccccCceeeeeCHHHHHHHHH----------hC---C-CCCCCHHHHHHHHHHhcC---HHHHHHHHHH
Confidence 445677888 8666 5778889988876422 11 1 235888888888888775 3357788888
Q ss_pred HHHHHHHHHHHHhccCCcccccCCCC-----CcccHHHHHHHHHccCccccCCC----CCCccceeeccCCCHHHHHHHH
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPVQAG-----FPLDELFLKEAKAHNMIQLKGHR----LVGGIRASIYNAITVDEAVILV 599 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v~~~-----~~~~~~~~~~~~~~~i~~~~g~~----~~~~~r~~~~~a~~~~~~~~l~ 599 (621)
.+++.+.+++.+++.+++-..+-... ......+.+.++++||....|.. ..+.||++. . +.||++.|+
T Consensus 282 ~~~~~~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~~~iRis~-~--~~~~i~~~~ 358 (367)
T 3euc_A 282 LRAERSRVAEGMAAHGGVTVFPSAANFLLARVPDAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTV-S--TPEENAQFL 358 (367)
T ss_dssp HHHHHHHHHHHHHTSTTCEECCCSSSEEEEECSCHHHHHHHHHTTTEECEECGGGCGGGTTEEEEEC-C--CHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcEECCCCCeEEEEECCCHHHHHHHHHHCCeEEEECCccCCCCCCEEEEec-C--CHHHHHHHH
Confidence 99999999999988765421111100 01235588889999999665543 257799993 3 999999999
Q ss_pred HHHHHH
Q psy8733 600 KFMKEF 605 (621)
Q Consensus 600 ~~~~~~ 605 (621)
+.|+++
T Consensus 359 ~~l~~~ 364 (367)
T 3euc_A 359 EAFAAS 364 (367)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998875
No 343
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=51.72 E-value=32 Score=36.77 Aligned_cols=106 Identities=10% Similarity=0.087 Sum_probs=69.3
Q ss_pred CCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcc----CC----------cccccCCCCCcccHH
Q psy8733 495 NSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNS----DK----------FYECPVQAGFPLDEL 560 (621)
Q Consensus 495 ~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~~~ka~~lY~~id~~----~~----------~~~~~v~~~~~~~~~ 560 (621)
.+|++ +|.++...+..+|+.+.+.+ +.++.+++.+.|.+.+++- +. |+...+. +......
T Consensus 351 ~~T~~-~~~~~~aaa~aal~~~~~~~----~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~~~~g~~~~~~~~-~~~~~~~ 424 (472)
T 1ohv_A 351 FNTWL-GDPSKNLLLAEVINIIKRED----LLSNAAHAGKVLLTGLLDLQARYPQFISRVRGRGTFCSFDTP-DESIRNK 424 (472)
T ss_dssp CCSSS-SCHHHHHHHHHHHHHHHHTT----HHHHHHHHHHHHHHHHHHHHHHCTTTCEEEEEETTEEEEECS-SHHHHHH
T ss_pred cCccC-ccHHHHHHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHHHHHhhCCCcEEeecCCceEEEEEeC-ChhHHHH
Confidence 34544 45567788888899887632 4566667777777766542 21 1111111 0012356
Q ss_pred HHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHHHHHHHHHHHH
Q psy8733 561 FLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 561 ~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
|.+.+.++|+....+. .+.||++.=-.++.||++.+++.|+++.++
T Consensus 425 ~~~~l~~~Gv~~~~~g--~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 425 LISIARNKGVMLGGCG--DKSIRFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp HHHHHHHTTEECEEET--TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCeEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 8888989999865431 467999776689999999999999887653
No 344
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=51.69 E-value=9.1 Score=38.66 Aligned_cols=132 Identities=11% Similarity=0.007 Sum_probs=93.0
Q ss_pred HHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
++..|..|.+|++| ++.++.+++++++.. .... . .++|.+..+.+...|+.. ..++.+.++
T Consensus 220 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~----------~~~~---~-~~~~~~~~~~~~~~l~~~---~~~~~~~~~ 282 (365)
T 3get_A 220 LYLGTFSKLYGLGGLRIGYGIANANIISAFY----------KLRA---P-FNVSNLALKAAVAAMDDD---EFTEKTLEN 282 (365)
T ss_dssp EEEEESSSTTSCTTTCCEEEEECHHHHHHHH----------HHSC---T-TCSCHHHHHHHHHHHTCH---HHHHHHHHH
T ss_pred EEEeecchHhcCcchheEEEEcCHHHHHHHH----------HhcC---C-CCcCHHHHHHHHHHhCCH---HHHHHHHHH
Confidence 44557789999666 688888999887632 1111 1 358889888888887732 357788888
Q ss_pred HHHHHHHHHHHHhccCCc--------c-cccCCCCCcccHHHHHHHHHccCccccC--CCCCCccceeeccCCCHHHHHH
Q psy8733 529 SLQKSVLLYQEIDNSDKF--------Y-ECPVQAGFPLDELFLKEAKAHNMIQLKG--HRLVGGIRASIYNAITVDEAVI 597 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~--------~-~~~v~~~~~~~~~~~~~~~~~~i~~~~g--~~~~~~~r~~~~~a~~~~~~~~ 597 (621)
.+++.+.+.+.+++. ++ | -..+. . .....|.+.++++||....| ++ .+.||++.= +.+|++.
T Consensus 283 ~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~-~-~~~~~~~~~l~~~gi~v~~g~~~~-~~~iRis~~---~~~~i~~ 355 (365)
T 3get_A 283 NFSQMELYKEFAKKH-NIKIIDSYTNFITYFFD-E-KNSTDLSEKLLKKGIIIRNLKSYG-LNAIRITIG---TSYENEK 355 (365)
T ss_dssp HHHHHHHHHHHHHHT-TCEECCCSSSEEEEECS-S-SCHHHHHHHHHTTTEECEECGGGT-CSEEEEECC---CHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCEECCCCCeEEEEECC-C-CCHHHHHHHHHHCCEEEEECccCC-CCEEEEEcC---CHHHHHH
Confidence 899999999999875 22 1 11111 1 13456888999999986544 44 678999942 8999999
Q ss_pred HHHHHHHHH
Q psy8733 598 LVKFMKEFR 606 (621)
Q Consensus 598 l~~~~~~~~ 606 (621)
|++.|+++.
T Consensus 356 l~~~l~~~l 364 (365)
T 3get_A 356 FFTEFDKIL 364 (365)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999998753
No 345
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=51.53 E-value=9.6 Score=39.09 Aligned_cols=140 Identities=11% Similarity=0.098 Sum_probs=89.7
Q ss_pred HHHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHH---HHhcCChH
Q psy8733 449 FGVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAW---IKRQGGLA 523 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~---~~~~gg~~ 523 (621)
.+++..|..|.+|++| ++.++.+++++++.. . ... .+..++|.+..+++...|+. ..+ .++
T Consensus 225 ~~i~~~s~SK~~~~~G~RiG~~~~~~~~~~~l~----------~-~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~--~~~ 290 (385)
T 1b5p_A 225 HTLTVNGAAKAFAMTGWRIGYACGPKEVIKAMA----------S-VSR-QSTTSPDTIAQWATLEALTNQEASRA--FVE 290 (385)
T ss_dssp TEEEEEESTTTTTCGGGCCEEEECCHHHHHHHH----------H-HHH-TTTCSCCHHHHHHHHHHHHCHHHHHH--HHH
T ss_pred CEEEEEechhhcCCcccceEEEEeCHHHHHHHH----------H-HHh-hccCCCCHHHHHHHHHHHhCCCcchH--HHH
Confidence 3566778889999888 899999998876532 1 111 12335667777766666643 221 266
Q ss_pred HHHHHHHHHHHHHHHHHhccC--------CcccccCCCCC-cccHHHHHHHHHccCcccc--CCCCCCccceeeccCCCH
Q psy8733 524 KMEQNSLQKSVLLYQEIDNSD--------KFYECPVQAGF-PLDELFLKEAKAHNMIQLK--GHRLVGGIRASIYNAITV 592 (621)
Q Consensus 524 ~~~~~~~~ka~~lY~~id~~~--------~~~~~~v~~~~-~~~~~~~~~~~~~~i~~~~--g~~~~~~~r~~~~~a~~~ 592 (621)
.+.++.+++.+.+++.+++.. +||..+.-+.. .-..+|.+.+.++||.... .++..+.||++.- ++.
T Consensus 291 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~~~~~iRis~~--~~~ 368 (385)
T 1b5p_A 291 MAREAYRRRRDLLLEGLTALGLKAVRPSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFAAFGHVRLSYA--TSE 368 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCBCCCSBTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGTCTTEEEEECC--SCH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCeecCCCeeEEEEEecCCCCCCHHHHHHHHHHCCeEEecccccCCCCeEEEEec--CCH
Confidence 777888889999999997641 22222111100 1235588888899998544 4555678999954 788
Q ss_pred HHHHHHHHHHHH
Q psy8733 593 DEAVILVKFMKE 604 (621)
Q Consensus 593 ~~~~~l~~~~~~ 604 (621)
|+++..++-|++
T Consensus 369 ~~i~~~l~~l~~ 380 (385)
T 1b5p_A 369 ENLRKALERFAR 380 (385)
T ss_dssp HHHHHHHHHGGG
T ss_pred HHHHHHHHHHHH
Confidence 887766665544
No 346
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=50.71 E-value=18 Score=38.74 Aligned_cols=157 Identities=15% Similarity=0.069 Sum_probs=99.2
Q ss_pred HHHHHhhcccccc-cCCcEEeeecHhH-hhhcCCCCCceeeeeec-----ccCCCccCCCchhHHHHHHHHHHHHHhcCC
Q psy8733 449 FGVIIAGAQKNIG-PAGITVVIVREDL-LEYALPITPTVFHFKIN-----ADNNSVYNTPPTFVVHVIQRVFAWIKRQGG 521 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl~v~iv~~~~-l~~~~~~~p~~~~y~~~-----~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg 521 (621)
.|.+-.+.+|.+| |-|.+++++++.. +.++....|..+.-... ..+.+...+-+ |...-+...|+.+.. .|
T Consensus 300 aDsi~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~-~~~l~~~~al~~~g~-~g 377 (481)
T 4e1o_A 300 ADSFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRR-FRSVKLWFVIRSFGV-KN 377 (481)
T ss_dssp CSEEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCC-CTHHHHHHHHHHHHH-HH
T ss_pred CCEEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCchhccCcccCCCCCcccccccCCCC-ccHHHHHHHHHHhHH-HH
Confidence 4778889999998 9999999998765 45544433433311100 00111111211 333334444454432 35
Q ss_pred hHHHHHHHHHHHHHHHHHHhccCCcccccCCC----------C-CcccHHHHHHHHHccCccccCC--CCCCcccee-ec
Q psy8733 522 LAKMEQNSLQKSVLLYQEIDNSDKFYECPVQA----------G-FPLDELFLKEAKAHNMIQLKGH--RLVGGIRAS-IY 587 (621)
Q Consensus 522 ~~~~~~~~~~ka~~lY~~id~~~~~~~~~v~~----------~-~~~~~~~~~~~~~~~i~~~~g~--~~~~~~r~~-~~ 587 (621)
++++-++..+.++.+.+.|.+.++| ....++ + ......+.+.+.++|.+...+- +..+.||++ ..
T Consensus 378 ~~~~~~~~~~~a~~l~~~L~~~~g~-~~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~g~~~lR~~~~~ 456 (481)
T 4e1o_A 378 LQAHVRHGTEMAKYFESLVRNDPSF-EIPAKRHLGLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATIQDKLIIRFTVTS 456 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCTTE-ECCSCCCSSEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEETTEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCe-EEecCCceeEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEECCEEEEEEEeCC
Confidence 8888899999999999999987764 221111 1 1245668888888896644332 223459999 45
Q ss_pred cCCCHHHHHHHHHHHHHHHHH
Q psy8733 588 NAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 588 ~a~~~~~~~~l~~~~~~~~~~ 608 (621)
|.++.|+++.+++-|+++.++
T Consensus 457 ~~tt~~di~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 457 QFTTRDDILRDWNLIRDAATL 477 (481)
T ss_dssp TTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHH
Confidence 777999999999999988765
No 347
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=50.61 E-value=8.7 Score=39.47 Aligned_cols=145 Identities=11% Similarity=0.030 Sum_probs=96.4
Q ss_pred HHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHH
Q psy8733 450 GVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNS 529 (621)
Q Consensus 450 ~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~ 529 (621)
+++..|..|.+|..| +.++.++++++.... ++. .... ...||| +.+..+...++++.+. |++.+.++.
T Consensus 240 ~i~~~s~sK~~~~~G-G~~~~~~~~~~~l~~-------~~~-~~~~-~~~~~~-~~~~a~~~al~~~~~~-~~~~~~~~~ 307 (401)
T 2bwn_A 240 DIFNGTLAKAYGVFG-GYIAASARMVDAVRS-------YAP-GFIF-STSLPP-AIAAGAQASIAFLKTA-EGQKLRDAQ 307 (401)
T ss_dssp SEEEEESSSTTCSCC-EEEEECHHHHHHHHH-------HCH-HHHT-SBCCCH-HHHHHHHHHHHHHTSH-HHHHHHHHH
T ss_pred cEEEeechhhccCCC-CEEecCHHHHHHHHH-------hCc-Ccee-cCCCCH-HHHHHHHHHHHHHHhc-ccHHHHHHH
Confidence 445567889999777 777788888755211 011 0011 234667 7888888899988643 578889999
Q ss_pred HHHHHHHHHHHhccCCcccccCCC-------CCc-ccHHHHHHH-HHccCccccCCCC-----CCccceeeccCCCHHHH
Q psy8733 530 LQKSVLLYQEIDNSDKFYECPVQA-------GFP-LDELFLKEA-KAHNMIQLKGHRL-----VGGIRASIYNAITVDEA 595 (621)
Q Consensus 530 ~~ka~~lY~~id~~~~~~~~~v~~-------~~~-~~~~~~~~~-~~~~i~~~~g~~~-----~~~~r~~~~~a~~~~~~ 595 (621)
+++.+.+++.+++. ++-..+..- ... ....|.+.+ +++||....|+.. .+.+|++.-..++.||+
T Consensus 308 ~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i 386 (401)
T 2bwn_A 308 QMHAKVLKMRLKAL-GMPIIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQI 386 (401)
T ss_dssp HHHHHHHHHHHHHH-TCCBCCCSSSCEEEECCCHHHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHH
T ss_pred HHHHHHHHHHHHHC-CCcccCCCCCeEEEEeCChHHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHH
Confidence 99999999999865 321100000 011 234577777 4889987555421 24699999888999999
Q ss_pred HHHHHHHHHHHH
Q psy8733 596 VILVKFMKEFRH 607 (621)
Q Consensus 596 ~~l~~~~~~~~~ 607 (621)
+.+++.|+++.+
T Consensus 387 ~~~~~~l~~~~~ 398 (401)
T 2bwn_A 387 DGLVHAMDLLWA 398 (401)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHHHH
Confidence 999999988754
No 348
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=48.92 E-value=13 Score=37.52 Aligned_cols=139 Identities=16% Similarity=0.090 Sum_probs=96.2
Q ss_pred HHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
++..|..|.+|++| ++.++.+++++++... .. + ..++|.++.+.+...|+. ...++.+.++
T Consensus 207 i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~----------~~---~-~~~~~~~~~~a~~~~l~~---~~~~~~~~~~ 269 (360)
T 3hdo_A 207 VVTRTLSKSYSLAGMRIGLAIARPEVIAALDK----------IR---D-HYNLDRLAQAACVAALRD---QAYLSECCRR 269 (360)
T ss_dssp EEEEESTTTTSCTTSCCEEEECCHHHHHHHHH----------HS---C-SCCSCHHHHHHHHHHHHC---HHHHHHHHHH
T ss_pred EEEecchHhhcCCccceeeEeeCHHHHHHHHH----------hC---C-CCCCCHHHHHHHHHHhcC---HHHHHHHHHH
Confidence 45568899999666 6888889988766321 11 1 136888888888888774 2357888888
Q ss_pred HHHHHHHHHHHHhccCCccccc-------CCCCCcccHHHHHHHHHccCccccCCC--CCCccceeeccCCCHHHHHHHH
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECP-------VQAGFPLDELFLKEAKAHNMIQLKGHR--LVGGIRASIYNAITVDEAVILV 599 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~-------v~~~~~~~~~~~~~~~~~~i~~~~g~~--~~~~~r~~~~~a~~~~~~~~l~ 599 (621)
.+++.+.+.+.+++. ++-..+ +.-.......|.+.++++||....|.. ..+.||++.= +.+|+++|+
T Consensus 270 ~~~~~~~l~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~e~~~l~ 345 (360)
T 3hdo_A 270 IRETREWFTTELRSI-GYDVIPSQGNYLFATPPDRDGKRVYDGLYARKVLVRHFSDPLLAHGMRISIG---TREEMEQTL 345 (360)
T ss_dssp HHHHHHHHHHHHHHT-TCEECCCSSSEEEEECTTCCHHHHHHHHHHTTEECBCCCSTTTTTSEEEECC---CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC-CCEEcCCCccEEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCCCEEEEEcC---CHHHHHHHH
Confidence 999999999999875 221111 000111245688899999998655543 3577999942 999999999
Q ss_pred HHHHHHHHHcC
Q psy8733 600 KFMKEFRHKHS 610 (621)
Q Consensus 600 ~~~~~~~~~~~ 610 (621)
+-|+++++.|.
T Consensus 346 ~al~~~~~~~~ 356 (360)
T 3hdo_A 346 AALKEIGEGHH 356 (360)
T ss_dssp HHHHHHHC---
T ss_pred HHHHHHhcccc
Confidence 99999997664
No 349
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=48.75 E-value=5.9 Score=41.08 Aligned_cols=146 Identities=10% Similarity=0.031 Sum_probs=92.0
Q ss_pred hHHHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHH
Q psy8733 448 FFGVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKM 525 (621)
Q Consensus 448 ~~~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~ 525 (621)
..+++..|..|.+|++| ++.+++++++++...+ .....+++ +|.+..+.+...|+.. ...++.+
T Consensus 223 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~-----------~~~~~~~~-~~~~~~~a~~~~l~~~--~~~~~~~ 288 (411)
T 2o0r_A 223 ERTITISSAAKMFNCTGWKIGWACGPAELIAGVRA-----------AKQYLSYV-GGAPFQPAVALALDTE--DAWVAAL 288 (411)
T ss_dssp GGEEEEEEHHHHTTCTTTCEEEEECCHHHHHHHHH-----------HHHHHTSC-CCTTHHHHHHHHHHHC--HHHHHHH
T ss_pred CCEEEEeechhhcCCccceEEEEeeCHHHHHHHHH-----------HHhhccCC-CChHHHHHHHHHHhCC--hHHHHHH
Confidence 35677889999999889 8999999998765321 11112333 3445566666666543 2246778
Q ss_pred HHHHHHHHHHHHHHHhccC--------Ccccc-cCCCC-CcccHHHHHHH-HHccCccccC--C-C------------CC
Q psy8733 526 EQNSLQKSVLLYQEIDNSD--------KFYEC-PVQAG-FPLDELFLKEA-KAHNMIQLKG--H-R------------LV 579 (621)
Q Consensus 526 ~~~~~~ka~~lY~~id~~~--------~~~~~-~v~~~-~~~~~~~~~~~-~~~~i~~~~g--~-~------------~~ 579 (621)
.++.+++.+.+.+.+++.. +||.. .+.+. ..-..+|.+.+ +++||....| | . ..
T Consensus 289 ~~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~ 368 (411)
T 2o0r_A 289 RNSLRARRDRLAAGLTEIGFAVHDSYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWN 368 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHTCEECCCCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGG
T ss_pred HHHHHHHHHHHHHHHHHcCCEecCCCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCC
Confidence 8888899999999997641 22211 11100 01134576665 4789886544 3 2 13
Q ss_pred CccceeeccCCCHHHHHHHHHHHHHHHHHc
Q psy8733 580 GGIRASIYNAITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 580 ~~~r~~~~~a~~~~~~~~l~~~~~~~~~~~ 609 (621)
+.||++.. .+.|+++.+++.|+++.+++
T Consensus 369 ~~iRis~~--~~~e~i~~~~~~l~~~~~~~ 396 (411)
T 2o0r_A 369 HLVRFTFC--KRDDTLDEAIRRLSVLAERP 396 (411)
T ss_dssp GCEEEECC--SCHHHHHHHHHHHGGGGC--
T ss_pred CeEEEEec--CCHHHHHHHHHHHHHHHhcc
Confidence 56999964 48999999999888776544
No 350
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=47.83 E-value=4.2 Score=41.41 Aligned_cols=142 Identities=15% Similarity=0.152 Sum_probs=95.0
Q ss_pred HHHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 449 FGVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
.+++..|..|.+|++| ++.++.++++++...+ +. .....++|.+..+.+...|+.+. ...++.+.
T Consensus 213 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~ 279 (370)
T 2z61_A 213 KTILINGFSKLYAMTGWRIGYVISNDEIIEAILK-------LQ-----QNLFISAPTISQYAALKAFEKET-EREINSMI 279 (370)
T ss_dssp SEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH-------HH-----HHHTSSSCHHHHHHHGGGGSHHH-HHHHHHHH
T ss_pred cEEEEecChhccCCccceEEEEEECHHHHHHHHH-------HH-----hhcccCCCHHHHHHHHHHHhccC-HHHHHHHH
Confidence 3566788999999888 8999999998765321 01 11234678888888777776521 22467778
Q ss_pred HHHHHHHHHHHHHHhccCCcccccCCCCC----c---ccHHHHHHHH-HccCccccC--CCC--CCccceeeccCCCHHH
Q psy8733 527 QNSLQKSVLLYQEIDNSDKFYECPVQAGF----P---LDELFLKEAK-AHNMIQLKG--HRL--VGGIRASIYNAITVDE 594 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~~~~~~~v~~~~----~---~~~~~~~~~~-~~~i~~~~g--~~~--~~~~r~~~~~a~~~~~ 594 (621)
++.+++.+.+.+.+++. ++-..+.+.+. + ...+|.+.+. ++||....| ++. .+.+|++.= ++.|+
T Consensus 280 ~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~--~~~~~ 356 (370)
T 2z61_A 280 KEFDRRRRLVLKYVKDF-GWEVNNPIGAYYVFPNIGEDGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYA--NSYEN 356 (370)
T ss_dssp HHHHHHHHHHHHHHHHT-TCBCCCCCBTTEECCBCSSCHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECC--SCHHH
T ss_pred HHHHHHHHHHHHHHHHc-CCeecCCCcceEEEEecCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe--CCHHH
Confidence 88889999999999864 22110000000 1 2345777776 789986554 443 567999965 79999
Q ss_pred HHHHHHHHHHHH
Q psy8733 595 AVILVKFMKEFR 606 (621)
Q Consensus 595 ~~~l~~~~~~~~ 606 (621)
++.+++-|+++.
T Consensus 357 i~~~~~~l~~~l 368 (370)
T 2z61_A 357 IKEGLERIKEFL 368 (370)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 998888887654
No 351
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=47.82 E-value=18 Score=38.96 Aligned_cols=29 Identities=21% Similarity=0.308 Sum_probs=22.8
Q ss_pred HHHHHhhcccccc-cCCc--EEeeecH-hHhhh
Q psy8733 449 FGVIIAGAQKNIG-PAGI--TVVIVRE-DLLEY 477 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl--~v~iv~~-~~l~~ 477 (621)
.|++..|.-|.+| |+|+ +++++++ ++++.
T Consensus 269 ~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~ 301 (464)
T 1ibj_A 269 ADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKE 301 (464)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEECSHHHHHH
T ss_pred CEEEEECCcccccCCCCCcEEEEEEChHHHHHH
Confidence 5778889999996 8887 8899985 66554
No 352
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=47.79 E-value=28 Score=37.15 Aligned_cols=156 Identities=12% Similarity=0.077 Sum_probs=97.4
Q ss_pred HHHHHhhcccccc-cC-----CcEEeeecHhHhhhcC-CCC-----Cceeeee--ecccCCCccCCCchhHHHHHHHHHH
Q psy8733 449 FGVIIAGAQKNIG-PA-----GITVVIVREDLLEYAL-PIT-----PTVFHFK--INADNNSVYNTPPTFVVHVIQRVFA 514 (621)
Q Consensus 449 ~~~~~a~~qk~~G-pa-----Gl~v~iv~~~~l~~~~-~~~-----p~~~~y~--~~~~~~s~~nTP~~~~iy~~~~vl~ 514 (621)
.|++..|.+|.+| |- |+++++++++++++.. +.+ ...+++. .+......+ |+|.+....+-..++
T Consensus 257 ~di~~~s~~K~~~~p~g~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~aa~~~l~ 335 (474)
T 1wyu_B 257 FDVVHLNLHKTFTVPHGGGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSF-YGNFLALVRAWAYIR 335 (474)
T ss_dssp CSEEECCTTTTTCCCCTTSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSST-TSCHHHHHHHHHHHH
T ss_pred CcEEEEeCccccccCCCCCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccC-cCcHHHHHHHHHHHH
Confidence 5777788899998 63 5999999999876532 110 1111111 000111222 466655444444444
Q ss_pred HHHhcCChHHHHHHHHHHHHHHHHHHhccCCcccccCCC-----------CCcccHHHHHHHHHccCccc-cCCC--CCC
Q psy8733 515 WIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQA-----------GFPLDELFLKEAKAHNMIQL-KGHR--LVG 580 (621)
Q Consensus 515 ~~~~~gg~~~~~~~~~~ka~~lY~~id~~~~~~~~~v~~-----------~~~~~~~~~~~~~~~~i~~~-~g~~--~~~ 580 (621)
.+-.. |++.+.++..++++.+++.|++. ++ ..+... .......|.+.+.++||... .+|. ..+
T Consensus 336 ~~g~~-~l~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~Gi~~~~~~~~~~~~~ 412 (474)
T 1wyu_B 336 TLGLE-GLKKAAALAVLNARYLKELLKEK-GY-RVPYDGPSMHEFVAQPPEGFRALDLAKGLLELGFHPPTVYFPLIVKE 412 (474)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHHHHT-TC-BCSSCSSCCSCEEEBCSTTCCHHHHHHHHHHTTCCCCEESCSTTSTT
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHhhc-Cc-EecCCCCcceEEEEEcCCCCCHHHHHHHHHHCCccccccccccccCC
Confidence 33222 47778888999999999999875 32 111110 01134568888889999842 2232 256
Q ss_pred ccceeeccCCCHHHHHHHHHHHHHHHHH
Q psy8733 581 GIRASIYNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 581 ~~r~~~~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
.+|++.-..++.|+++.+++.|+++.++
T Consensus 413 ~lRis~~~~~t~e~id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 413 ALMVEPTETEAKETLEAFAEAMGALLKK 440 (474)
T ss_dssp CEEECCCTTSCHHHHHHHHHHHHHHHTS
T ss_pred EEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 7999998889999999999999988654
No 353
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=47.46 E-value=12 Score=38.48 Aligned_cols=146 Identities=14% Similarity=0.107 Sum_probs=92.2
Q ss_pred HHHHHhhccccc-ccCCcEEeeecH---hHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHH
Q psy8733 449 FGVIIAGAQKNI-GPAGITVVIVRE---DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAK 524 (621)
Q Consensus 449 ~~~~~a~~qk~~-GpaGl~v~iv~~---~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~ 524 (621)
.|++..|..|.+ ||.| ++++.++ .+.+.... .....++++|+...+..+...+..+.+ .+++.
T Consensus 223 ~di~~~s~sK~~~g~~g-g~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~a~~~a~~~~~~-~~~~~ 289 (420)
T 3gbx_A 223 AHVVTTTTHKTLAGPRG-GLILAKGGDEELYKKLNS-----------AVFPSAQGGPLMHVIAGKAVALKEAME-PEFKV 289 (420)
T ss_dssp SSEEEEESSGGGCSCSC-EEEEESSCCHHHHHHHHH-----------HHC----CCCCHHHHHHHHHHHHHTTS-HHHHH
T ss_pred CCEEEeecccCCCCCCc-eEEEEcCCcHHHHHHhhh-----------hcCCCCCCCcchhHHHHHHHHHHHHHh-HhHHH
Confidence 467778889999 6887 8888887 55544211 112234568888877777766655432 24678
Q ss_pred HHHHHHHHHHHHHHHHhccCCccccc---------CC-CCCc-ccHHHHHHHHHccCcccc-------CCCC-CCcccee
Q psy8733 525 MEQNSLQKSVLLYQEIDNSDKFYECP---------VQ-AGFP-LDELFLKEAKAHNMIQLK-------GHRL-VGGIRAS 585 (621)
Q Consensus 525 ~~~~~~~ka~~lY~~id~~~~~~~~~---------v~-~~~~-~~~~~~~~~~~~~i~~~~-------g~~~-~~~~r~~ 585 (621)
+.++..++.+.+.+.+.+. ++-..+ +. +... ....+.+.++++||.... |... .+++|++
T Consensus 290 ~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~iRi~ 368 (420)
T 3gbx_A 290 YQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIG 368 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECCTTCSSCTTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccCCCCccccCCCcceEEe
Confidence 8888899999999999763 221100 00 0001 233467788889998655 2211 3449998
Q ss_pred eccC----CCHHHHHHHHHHHHHHHHH
Q psy8733 586 IYNA----ITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 586 ~~~a----~~~~~~~~l~~~~~~~~~~ 608 (621)
.-.. ++.++++.+++.|++..++
T Consensus 369 ~~~~~~~~~~~~~i~~~~~~l~~~l~~ 395 (420)
T 3gbx_A 369 SPAVTRRGFKEAEVKELAGWMCDVLDN 395 (420)
T ss_dssp CHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred cchhcccCCCHHHHHHHHHHHHHHHhC
Confidence 6443 6689999999999887654
No 354
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=47.18 E-value=6.8 Score=40.59 Aligned_cols=152 Identities=14% Similarity=0.060 Sum_probs=98.8
Q ss_pred HHHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 449 FGVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
.+++..|..|.+|++| ++.++.++++++.... .. ..+..++|.++.+.+...|+.. ...++.+.
T Consensus 236 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~-----------~~-~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~ 301 (412)
T 2x5d_A 236 IAVEFFTLSKSYNMAGWRIGFMVGNPELVSALAR-----------IK-SYHDYGTFTPLQVAAIAALEGD--QQCVRDIA 301 (412)
T ss_dssp TEEEEEECC-CCSCTTSCCEEEEECHHHHHHHHH-----------HH-HHHCCCCCHHHHHHHHHHHHSC--SHHHHHHH
T ss_pred cEEEEecCccccCCcccceEEEEcCHHHHHHHHH-----------HH-hhhccCCCHHHHHHHHHHHhCC--HHHHHHHH
Confidence 4566788999999888 6999999998765321 11 1123467778887776666532 22467888
Q ss_pred HHHHHHHHHHHHHHhccC--------Ccccc-cCCCCCc--ccHHHHHHHH-HccCccccC--CCC--CCccceeeccCC
Q psy8733 527 QNSLQKSVLLYQEIDNSD--------KFYEC-PVQAGFP--LDELFLKEAK-AHNMIQLKG--HRL--VGGIRASIYNAI 590 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~--------~~~~~-~v~~~~~--~~~~~~~~~~-~~~i~~~~g--~~~--~~~~r~~~~~a~ 590 (621)
++.+++.+.+.+.+++.. +||.. .+.++.. -...|.+.+. ++||....| ++. .+.||++.= .
T Consensus 302 ~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~--~ 379 (412)
T 2x5d_A 302 RQYQQRRDVLVKGLREAGWMVENPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALI--E 379 (412)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCCCCSBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC--S
T ss_pred HHHHHHHHHHHHHHHHCCCEecCCCeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEec--C
Confidence 888999999999998641 23221 1111110 1345777774 579986555 332 467999964 3
Q ss_pred CHHHHHHHHHHHHHHHHHcCCCCccc
Q psy8733 591 TVDEAVILVKFMKEFRHKHSRLSAQS 616 (621)
Q Consensus 591 ~~~~~~~l~~~~~~~~~~~~~~~~~~ 616 (621)
+.|+++.+++-|+++.++++.+|.+-
T Consensus 380 ~~~~l~~~l~~l~~~l~~~~~~~~~~ 405 (412)
T 2x5d_A 380 NRDRLRQAVRGIKAMFRADGLLSPQR 405 (412)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCC----
T ss_pred CHHHHHHHHHHHHHHHHhcCCcChHH
Confidence 89999999999999998888887764
No 355
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=46.41 E-value=28 Score=35.90 Aligned_cols=78 Identities=6% Similarity=-0.007 Sum_probs=46.6
Q ss_pred hHHHHHhhcccccc-cCC--cEEeeecH-hHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChH
Q psy8733 448 FFGVIIAGAQKNIG-PAG--ITVVIVRE-DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLA 523 (621)
Q Consensus 448 ~~~~~~a~~qk~~G-paG--l~v~iv~~-~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~ 523 (621)
..|++..|..|.+| |.+ .++++.++ +++++..+ +.. ..-.+++.+.-+++-+.|+.+ +
T Consensus 195 ~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~-------~~~-----~~g~~~~~~~~~~~~~~l~~l------~ 256 (389)
T 3acz_A 195 GADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKF-------YRK-----DAGSLMAPMDAFLCARGMKTL------P 256 (389)
T ss_dssp TCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHH-------HHH-----HHCCCCCHHHHHHHHHHHTTH------H
T ss_pred CCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHH-------HHH-----hcCCCCCHHHHHHHHcCccHH------H
Confidence 35778889999998 666 48999998 88765321 111 011345556666666666533 2
Q ss_pred HHHHHHHHHHHHHHHHHhcc
Q psy8733 524 KMEQNSLQKSVLLYQEIDNS 543 (621)
Q Consensus 524 ~~~~~~~~ka~~lY~~id~~ 543 (621)
...++..+.++.+.+++++.
T Consensus 257 ~r~~~~~~~~~~l~~~l~~~ 276 (389)
T 3acz_A 257 IRMQIHMENGLKVAKFLEQH 276 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 22233445666777777765
No 356
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=45.90 E-value=10 Score=38.00 Aligned_cols=137 Identities=9% Similarity=-0.014 Sum_probs=94.5
Q ss_pred HHHhhcccccccCC--cEEee-ecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVI-VREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~i-v~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
++..|..|.+|++| ++.++ .+++++++... .. + ..|+|.+..+.+...|+. ...++.+.+
T Consensus 208 i~~~s~sK~~~~~G~r~g~~~~~~~~~~~~~~~----------~~---~-~~~~~~~~~~~~~~~l~~---~~~~~~~~~ 270 (361)
T 3ftb_A 208 FIIRAMTKFFAMPGIRFGYGITNNKEIAAKIKA----------KQ---N-PWNINCFAEMAAINCLKD---TNYIEESLL 270 (361)
T ss_dssp EEEEESSSTTSCGGGCCEEEEESCHHHHHHHHT----------TS---C-TTCSCHHHHHHHHHTSSC---HHHHHHHHH
T ss_pred EEEeeChhhcCCCCcceeEEEeCCHHHHHHHHh----------hC---C-CCCCCHHHHHHHHHHhcC---HHHHHHHHH
Confidence 44567889999666 46666 78888766322 11 1 237888998888888774 235778888
Q ss_pred HHHHHHHHHHHHHhccCCcc-cccCCCC-------CcccHHHHHHHHHccCccccC--CCC--CCccceeeccCCCHHHH
Q psy8733 528 NSLQKSVLLYQEIDNSDKFY-ECPVQAG-------FPLDELFLKEAKAHNMIQLKG--HRL--VGGIRASIYNAITVDEA 595 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~~~~~-~~~v~~~-------~~~~~~~~~~~~~~~i~~~~g--~~~--~~~~r~~~~~a~~~~~~ 595 (621)
+.+++.+.+++.+++.+++- ..+-.-. .....+|.+.+.++||....| |+. .+.||++. .+.++.
T Consensus 271 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~iRis~---~~~~~~ 347 (361)
T 3ftb_A 271 WIKKERKRFIEELNKIGFIKRVFSPHANFVLCRLENISGEKLYDSLLKEDIVIRRCCNFIGLDDSFVRFAI---KDEKKN 347 (361)
T ss_dssp HHHHHHHHHHHHHHHSSSEEEEECCSSSEEEEEESSSCHHHHHHHHHTTTEECEECTTSTTCCTTEEEEEC---CCHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCceecCCCCeEEEEEcCCCCHHHHHHHHHHCCeEEeeCccCCCCCCCEEEEEc---CCHHHH
Confidence 88999999999998876532 1111110 012346888899999986655 433 46699994 288899
Q ss_pred HHHHHHHHHHHH
Q psy8733 596 VILVKFMKEFRH 607 (621)
Q Consensus 596 ~~l~~~~~~~~~ 607 (621)
+.|.+.|+++.+
T Consensus 348 ~~l~~~l~~~~~ 359 (361)
T 3ftb_A 348 TKFLRALKGVEN 359 (361)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999988765
No 357
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=43.79 E-value=8.5 Score=39.56 Aligned_cols=138 Identities=13% Similarity=0.113 Sum_probs=90.4
Q ss_pred HHHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 449 FGVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
.+++..|..|.+|++| ++.++.++++++...+ .....++++ |.+..+.+...| . .| ++.+.
T Consensus 237 ~~i~~~s~sK~~~~~G~r~G~l~~~~~~~~~l~~-----------~~~~~~~~~-~~~~~~a~~~~l---~-~~-~~~~~ 299 (389)
T 1o4s_A 237 RIVYINGFSKSHSMTGWRVGYLISSEKVATAVSK-----------IQSHTTSCI-NTVAQYAALKAL---E-VD-NSYMV 299 (389)
T ss_dssp TEEEEEESTTTTTCGGGCCEEEECCHHHHHHHHH-----------HHHHHTCSC-CHHHHHHHHHHT---T-CC-CHHHH
T ss_pred cEEEEeechhhcCCcccceEEEEeCHHHHHHHHH-----------HhhhcccCC-CHHHHHHHHHHH---h-cc-HHHHH
Confidence 4667788899999888 8999999998765321 111123444 445555443333 2 34 89999
Q ss_pred HHHHHHHHHHHHHHhccCCcccccCCCCC----c---ccHHHHHHHH-HccCccccC--CCCCCccceeeccCCCHHHHH
Q psy8733 527 QNSLQKSVLLYQEIDNSDKFYECPVQAGF----P---LDELFLKEAK-AHNMIQLKG--HRLVGGIRASIYNAITVDEAV 596 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~~~~~~~v~~~~----~---~~~~~~~~~~-~~~i~~~~g--~~~~~~~r~~~~~a~~~~~~~ 596 (621)
++.+++.+.+.+.+++. ++-..+.+.+. + -..+|.+.+. ++||....| ++..|.||++.- .+.|+++
T Consensus 300 ~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~--~~~~~l~ 376 (389)
T 1o4s_A 300 QTFKERKNFVVERLKKM-GVKFVEPEGAFYLFFKVRGDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFA--TSIERLT 376 (389)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCCCCCSBSSEEEEECSSCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECC--SCHHHHH
T ss_pred HHHHHHHHHHHHHHHhc-CCeeecCCcceEEEEeCCCCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEe--CCHHHHH
Confidence 99999999999999875 22111101110 1 1345777775 889986544 454678999954 4899988
Q ss_pred HHHHHHHHHH
Q psy8733 597 ILVKFMKEFR 606 (621)
Q Consensus 597 ~l~~~~~~~~ 606 (621)
.+++-|+++.
T Consensus 377 ~~l~~l~~~l 386 (389)
T 1o4s_A 377 EALDRIEDFL 386 (389)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888887654
No 358
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=43.05 E-value=11 Score=38.17 Aligned_cols=140 Identities=11% Similarity=-0.002 Sum_probs=92.6
Q ss_pred HHHhhcccccccCC--cEEeeecH-hHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVRE-DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~-~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
++..|..|.+|++| ++.++.++ ++++.. +. ......+.|||.+....+...|+... ..++.+.+
T Consensus 231 i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~----------~~-~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~ 297 (391)
T 4dq6_A 231 ITCMAPTKTFNIAGLQSSYVVLPDEKDYKLL----------DD-AFTRIDIKRNNCFSLVATEASYNNGE--SWLESFLE 297 (391)
T ss_dssp EEEECSHHHHTCGGGCCEEEECCSHHHHHHH----------HH-HHHHTTCCCCCHHHHHHHHHHHHHCH--HHHHHHHH
T ss_pred EEEEechhhccCcccceEEEEeCCHHHHHHH----------HH-HHHhhcCCCCCHHHHHHHHHHHhchH--HHHHHHHH
Confidence 55668889999666 57777775 666542 11 11122356889998888888777532 23677888
Q ss_pred HHHHHHHHHHHHHhcc-CCc---------cc-ccCCCCCcccHHHHHHHHHc-cCccccC--CCC--CCccceeeccCCC
Q psy8733 528 NSLQKSVLLYQEIDNS-DKF---------YE-CPVQAGFPLDELFLKEAKAH-NMIQLKG--HRL--VGGIRASIYNAIT 591 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~-~~~---------~~-~~v~~~~~~~~~~~~~~~~~-~i~~~~g--~~~--~~~~r~~~~~a~~ 591 (621)
+.+++.+.+.+.+++. +++ +. ..+.........|.+.+.++ ||....| ++. .+.||++.= ++
T Consensus 298 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~--~~ 375 (391)
T 4dq6_A 298 YLESNIDFAIKYINENMPKLKVRKPEGTYLLWVDFSALGLSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLA--CP 375 (391)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECC--SC
T ss_pred HHHHHHHHHHHHHHhhCCCCEecCCCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEc--CC
Confidence 8899999999999873 432 11 11110011344688888888 9986544 444 467999843 79
Q ss_pred HHHHHHHHHHHHHH
Q psy8733 592 VDEAVILVKFMKEF 605 (621)
Q Consensus 592 ~~~~~~l~~~~~~~ 605 (621)
.|+++.+++-|++.
T Consensus 376 ~~~i~~~l~~l~~~ 389 (391)
T 4dq6_A 376 RSMLEEALIRIKNA 389 (391)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999988888764
No 359
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=42.59 E-value=15 Score=37.74 Aligned_cols=143 Identities=15% Similarity=0.153 Sum_probs=92.1
Q ss_pred HHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhc-CChHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQ-GGLAKMEQ 527 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~-gg~~~~~~ 527 (621)
++..|..|.+| +| ++.++.++++++.... .....++ ++|.++.+++...|+..... ..++.+.+
T Consensus 240 i~~~s~sK~~~-~G~r~G~~~~~~~~~~~~~~-----------~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 306 (407)
T 2zc0_A 240 IVAGTLSKVLG-TGFRIGWIIAEGEILKKVLM-----------QKQPIDF-CAPAISQYIALEYLKRGYFEKYHLEGALL 306 (407)
T ss_dssp EEEEESTTTTC-TTSCCEEEECCHHHHHHHHH-----------HHTTTTS-SSCHHHHHHHHHHHHTTHHHHHTTTTHHH
T ss_pred EEEcccccccC-CCcceEEEecCHHHHHHHHH-----------HHHhhcC-CCCHHHHHHHHHHHHcCCchHHHHHHHHH
Confidence 34556689999 67 7899999988765321 1111223 34667777666666543112 46778888
Q ss_pred HHHHHHHHHHHHHhcc-CCcccccCCC-C--------Cc-ccHHHHHHHHHc-cCccccCC--C----CCCccceeeccC
Q psy8733 528 NSLQKSVLLYQEIDNS-DKFYECPVQA-G--------FP-LDELFLKEAKAH-NMIQLKGH--R----LVGGIRASIYNA 589 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~-~~~~~~~v~~-~--------~~-~~~~~~~~~~~~-~i~~~~g~--~----~~~~~r~~~~~a 589 (621)
+.+++.+.+.+.+++. +++ ...... + .. -..+|.+.+.++ ||....|. . ..+.||++. ..
T Consensus 307 ~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~-~~ 384 (407)
T 2zc0_A 307 GYKEKRDIMLKALENHLPNA-EFTKPIAGMFVMFFLPEGADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNF-SR 384 (407)
T ss_dssp HHHHHHHHHHHHHHHHCTTS-CBCCCSBSSEEEEECSTTCCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEEC-SS
T ss_pred HHHHHHHHHHHHHHHhCCCC-EEecCCCcEEEEEEcCCCCCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEe-CC
Confidence 8889999999999763 332 111001 0 11 234588888888 99866553 2 246699965 44
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy8733 590 ITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~ 608 (621)
.+.|+++.+++.|++..++
T Consensus 385 ~~~~~i~~~~~~l~~~l~~ 403 (407)
T 2zc0_A 385 PSKEEIPIGIKKLAKLYKE 403 (407)
T ss_dssp SCTTHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 4899999999998887654
No 360
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=41.76 E-value=10 Score=39.75 Aligned_cols=142 Identities=12% Similarity=0.070 Sum_probs=97.2
Q ss_pred HHhhcccccccCC--cEEeeecH-------hHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCCh
Q psy8733 452 IIAGAQKNIGPAG--ITVVIVRE-------DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGL 522 (621)
Q Consensus 452 ~~a~~qk~~GpaG--l~v~iv~~-------~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~ 522 (621)
+..|..|++|..| ++.+++++ ++++.. +... +.+.+||.++.+.+..+|+... ...+
T Consensus 257 ~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l----------~~~~---~~~~~~~~~~~~a~~~~L~~~~-~~~~ 322 (427)
T 3dyd_A 257 SCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGL----------VKLS---QRILGPCTIVQGALKSILCRTP-GEFY 322 (427)
T ss_dssp EEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHH----------HHHH---HHHCCSCHHHHHHHHHHHHHSC-HHHH
T ss_pred EEeeccccCCCcCcceEEEEecCcchhhHHHHHHHH----------HHHH---hccCCCCHHHHHHHHHHHHhcC-HHHH
Confidence 3458899999888 67788773 444331 1111 1245789999998888887432 2346
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcccccCCC-CC--------------cccHHHHHHH-HHccCccccC--CCCCCccce
Q psy8733 523 AKMEQNSLQKSVLLYQEIDNSDKFYECPVQA-GF--------------PLDELFLKEA-KAHNMIQLKG--HRLVGGIRA 584 (621)
Q Consensus 523 ~~~~~~~~~ka~~lY~~id~~~~~~~~~v~~-~~--------------~~~~~~~~~~-~~~~i~~~~g--~~~~~~~r~ 584 (621)
+.+.++.+++.+.+++.+++.+++ ...... +. ....+|.+.+ +++||....| ++..+.+|+
T Consensus 323 ~~~~~~~~~~~~~l~~~L~~~~g~-~~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRi 401 (427)
T 3dyd_A 323 HNTLSFLKSNADLCYGALAAIPGL-RPVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRV 401 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTE-EEECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCc-eecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEE
Confidence 778888899999999999886543 211111 10 1235677666 6899987655 445678999
Q ss_pred eeccCCCHHHHHHHHHHHHHHHHHcC
Q psy8733 585 SIYNAITVDEAVILVKFMKEFRHKHS 610 (621)
Q Consensus 585 ~~~~a~~~~~~~~l~~~~~~~~~~~~ 610 (621)
+. +++.|+++.+++-|+++.+++.
T Consensus 402 s~--~~~~e~i~~~l~~l~~~l~~~~ 425 (427)
T 3dyd_A 402 VI--TVPEVMMLEACSRIQEFCEQHY 425 (427)
T ss_dssp ES--CSCHHHHHHHHHHHHHHHHHHC
T ss_pred EE--CCCHHHHHHHHHHHHHHHHHhh
Confidence 95 4899999999999999888775
No 361
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=40.36 E-value=52 Score=32.98 Aligned_cols=125 Identities=10% Similarity=0.102 Sum_probs=84.4
Q ss_pred ccccc-CCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHH
Q psy8733 458 KNIGP-AGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLL 536 (621)
Q Consensus 458 k~~Gp-aGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~~~ka~~l 536 (621)
|.+|+ -+++.++++++++++..+ ....++++++ .+...++...|+.+. .+.++.+++.+.+
T Consensus 241 K~~~~g~~~G~~~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~l~~~~------~~~~~~~~~~~~l 302 (375)
T 2eh6_A 241 KGLGGGVPIGAILAREEVAQSFTP-----------GSHGSTFGGN-PLACRAGTVVVDEVE------KLLPHVREVGNYF 302 (375)
T ss_dssp GGGGTTSCCEEEEEEHHHHTTCCT-----------TSCCCSSTTC-HHHHHHHHHHHHHHH------HHHHHHHHHHHHH
T ss_pred ccccCCCCeEEEEEcHHHHhhhcC-----------CCCCCCCCCC-HHHHHHHHHHHHHHH------HHHHHHHHHHHHH
Confidence 88883 468999999998765332 1123456664 455555556666654 5677778888899
Q ss_pred HHHHhccC--------CcccccCCCCCcccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHHHHHHHHH
Q psy8733 537 YQEIDNSD--------KFYECPVQAGFPLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKFMKEF 605 (621)
Q Consensus 537 Y~~id~~~--------~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~~~~~~~ 605 (621)
.+.+++.+ .|+...+.. -...|.+.+.++||....+ ..+.||++.-..++.|+++.+++.|++.
T Consensus 303 ~~~L~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~l~~~gi~~~~~--~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 303 KEKLKELGKGKVKGRGLMLGLELER---ECKDYVLKALEKGLLINCT--AGKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp HHHHHHTTSSEEEEETTEEEEECSS---CCHHHHHHHHHTTEECEEE--TTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCceEEEEEEEEEEcC---cHHHHHHHHHHCCCEEecC--CCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 99887643 111111111 2456888888899986544 2567999975589999999999988764
No 362
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=40.36 E-value=17 Score=36.46 Aligned_cols=139 Identities=12% Similarity=0.111 Sum_probs=90.5
Q ss_pred HHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
++..|..|.+|++| ++.++.+++++++.... ....++|.++.+++...|+... .=.+.+++.
T Consensus 190 i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~ 253 (350)
T 3fkd_A 190 VMVYSFSHAYGIPGLRIGYIVANKDFMKRVAAF--------------STPWAVNALAIEAAKFILIHPA--QFTLPIRKW 253 (350)
T ss_dssp EEEEESHHHHSCGGGCCEEEECCHHHHHHHHTT--------------CCTTCSCHHHHHHHHHHHHCTT--TTCCCHHHH
T ss_pred EEEecCchhccCcchheEeEEeCHHHHHHHHHh--------------CCCCCCCHHHHHHHHHHHhCHH--HHHHHHHHH
Confidence 55667889999665 78888899988764321 1134788888888777766321 013444555
Q ss_pred HHHHHHHHHHHHhccCCcccccCCC-------CCcccHHHHHHHHH-ccCccccC--CCC--CCccceeeccCCCHHHHH
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPVQA-------GFPLDELFLKEAKA-HNMIQLKG--HRL--VGGIRASIYNAITVDEAV 596 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v~~-------~~~~~~~~~~~~~~-~~i~~~~g--~~~--~~~~r~~~~~a~~~~~~~ 596 (621)
. ++.+.+++.+++.+++-..+-.. ......+|.+.+.+ +||....| ++. .+.||++.= +.++.+
T Consensus 254 ~-~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~---~~~~~~ 329 (350)
T 3fkd_A 254 Q-RNTVDFITALNRLDGVEVHPSGTTFFLLRLKKGTAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ---RPAQNQ 329 (350)
T ss_dssp H-HHHHHHHHHHHHSTTEEECCCSSSEEEEEESSSCHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC---CHHHHH
T ss_pred H-HHHHHHHHHHhcCCCcEECCCCCcEEEEECCCCCHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC---CHHHHH
Confidence 4 77888899998765431111000 00124568888888 99986554 333 566999842 889999
Q ss_pred HHHHHHHHHHHHc
Q psy8733 597 ILVKFMKEFRHKH 609 (621)
Q Consensus 597 ~l~~~~~~~~~~~ 609 (621)
.|++.|+++.+++
T Consensus 330 ~l~~al~~~~~~~ 342 (350)
T 3fkd_A 330 LFIKALETFLEKY 342 (350)
T ss_dssp HHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988654
No 363
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=40.15 E-value=36 Score=34.08 Aligned_cols=148 Identities=8% Similarity=0.000 Sum_probs=87.9
Q ss_pred HhhcccccccCCcEEeeec--HhHhhhcCCCCCc------eeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHH
Q psy8733 453 IAGAQKNIGPAGITVVIVR--EDLLEYALPITPT------VFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAK 524 (621)
Q Consensus 453 ~a~~qk~~GpaGl~v~iv~--~~~l~~~~~~~p~------~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~ 524 (621)
-+|.+|.+|| |++.++++ ++++++..+.... ...|+. ...+..+.+++.-....+ .. ..+++.
T Consensus 178 s~s~~K~~~~-g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~a~~~-~~------~~~~~~ 248 (375)
T 2fnu_A 178 SFHAIKPITT-AEGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEV-KSIGHNFRLNEIQSALGL-SQ------LKKAPF 248 (375)
T ss_dssp ECCTTSSSCC-SSCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEE-SSCCCBCCCCHHHHHHHH-HH------HTTHHH
T ss_pred eCCCCCCccc-cCceEEEeCCHHHHHHHHHHHhcCCcccccccccc-ccccccCCCCHHHHHHHH-HH------HHHHHH
Confidence 3456699999 99999995 6675543211100 001111 000111223333222211 11 246778
Q ss_pred HHHHHHHHHHHHHHHHhccCCcccccC----CCC---------Cc---ccHHHHHHHHHccCccccCCCC----------
Q psy8733 525 MEQNSLQKSVLLYQEIDNSDKFYECPV----QAG---------FP---LDELFLKEAKAHNMIQLKGHRL---------- 578 (621)
Q Consensus 525 ~~~~~~~ka~~lY~~id~~~~~~~~~v----~~~---------~~---~~~~~~~~~~~~~i~~~~g~~~---------- 578 (621)
+.++.++.++.+.+.|.+.+++-..+. ... .. -...|.+.++++||....+|..
T Consensus 249 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~p~~~~~~~~~~ 328 (375)
T 2fnu_A 249 LMQKREEAALTYDRIFKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQL 328 (375)
T ss_dssp HHHHHHHHHHHHHHHHTTCSSEEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCCCGGGSHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCCCccccCCCCCCCcceEEEEEEeCccccchHHHHHHHHHHCCCCccccccccccchhhhcC
Confidence 888888999999999987654311111 000 00 1345888899999986643321
Q ss_pred -------------CCccceeeccCCCHHHHHHHHHHHHHHHHHc
Q psy8733 579 -------------VGGIRASIYNAITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 579 -------------~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~~ 609 (621)
.+.||++..+.++.||++.+++.|+++.++.
T Consensus 329 ~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 329 FNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp HCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1459999999999999999999999987653
No 364
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=39.92 E-value=21 Score=37.65 Aligned_cols=148 Identities=10% Similarity=0.059 Sum_probs=93.5
Q ss_pred HHHHHhhcccccc-cCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 449 FGVIIAGAQKNIG-PAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
.|++..|..|.+| |-| ++++.++++.+... . .....+++||+...+..+...+..+.+. +.+.+.+
T Consensus 239 ~di~~~s~sK~l~G~~g-G~i~~~~~~~~~l~----------~-~~~~~~~~~~~~~~~~a~~~a~~~~~~~-~~~~~~~ 305 (447)
T 3h7f_A 239 ADVVSTTVHKTLGGGRS-GLIVGKQQYAKAIN----------S-AVFPGQQGGPLMHVIAGKAVALKIAATP-EFADRQR 305 (447)
T ss_dssp CSEEEEESSGGGCCCSC-EEEEECGGGHHHHH----------H-HHTTTTCSSCCHHHHHHHHHHHHHTTSH-HHHHHHH
T ss_pred CcEEEecCCcCCCCCCe-EEEEECHHHHHHHh----------h-hcCCcccCCccHHHHHHHHHHHHHhhCH-HHHHHHH
Confidence 3677788899886 877 88888888765421 1 1223356788877777777766655432 3577888
Q ss_pred HHHHHHHHHHHHHhcc----CCccccc---------CC-CCCcccH-HHHHHHHHccCccc----cC----CCCCCccce
Q psy8733 528 NSLQKSVLLYQEIDNS----DKFYECP---------VQ-AGFPLDE-LFLKEAKAHNMIQL----KG----HRLVGGIRA 584 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~----~~~~~~~---------v~-~~~~~~~-~~~~~~~~~~i~~~----~g----~~~~~~~r~ 584 (621)
+..++++.+.+.+.+. ++|-..+ ++ +...++. .+.+.++++||+.. .+ ....+++|+
T Consensus 306 ~~~~~~~~l~~~L~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRi 385 (447)
T 3h7f_A 306 RTLSGARIIADRLMAPDVAKAGVSVVSGGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRI 385 (447)
T ss_dssp HHHHHHHHHHHHHTSHHHHHTTCEEGGGSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC-------------CEEEE
T ss_pred HHHHHHHHHHHHHHhccccCCCeEEecCCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceec
Confidence 8889999999998765 2221110 00 0111233 45667777899865 22 222566999
Q ss_pred eecc----CCCHHHHHHHHHHHHHHHHHc
Q psy8733 585 SIYN----AITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 585 ~~~~----a~~~~~~~~l~~~~~~~~~~~ 609 (621)
+.-. .++.||++.+++.|++.-+..
T Consensus 386 g~~~~~~~~~~~eei~~~~~~l~~~l~~~ 414 (447)
T 3h7f_A 386 GTPALATRGFGDTEFTEVADIIATALATG 414 (447)
T ss_dssp ECHHHHHHTCCHHHHHHHHHHHHHHHHSG
T ss_pred cCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 7422 278999999999998876543
No 365
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=39.81 E-value=2e+02 Score=30.68 Aligned_cols=126 Identities=12% Similarity=0.062 Sum_probs=72.0
Q ss_pred cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHH----
Q psy8733 465 ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEI---- 540 (621)
Q Consensus 465 l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~~~ka~~lY~~i---- 540 (621)
++.++.++++.+...+ ....+||+- |-++.-+.--+|+.|++.+=+ ++.+++.+.+.+-+
T Consensus 303 ~~av~~~~~i~~~~~~-----------~~~~~Tf~g-npla~aaala~L~~i~~~~l~----~~~~~~g~~l~~~L~~l~ 366 (456)
T 4atq_A 303 LSAITGRADLLDAVHP-----------GGLGGTYGG-NPVACAAALAAIDTMEQHDLN----GRARHIEELALGKLRELA 366 (456)
T ss_dssp CEEEEEEHHHHTTSCT-----------TSSCCSSSS-CHHHHHHHHHHHHHHHHTTHH----HHHHHHHHHHHHHHHHHH
T ss_pred ceeeEecHHHHhcccc-----------cCCCCCCCC-ChHHHHhhHHHHHHHhhccHH----HHHHHHHHHHHHHHHHHH
Confidence 5678888888765322 123566664 455677778899988876522 23333333333332
Q ss_pred hccC-------------Ccccc--cCCC-----CCcccHHHHHHHHHccCccccCCCCCCccceeeccC--CCHHHHHHH
Q psy8733 541 DNSD-------------KFYEC--PVQA-----GFPLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNA--ITVDEAVIL 598 (621)
Q Consensus 541 d~~~-------------~~~~~--~v~~-----~~~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a--~~~~~~~~l 598 (621)
++.+ |++.. .+++ +.++...|.+.+.++|++....-..-+.||++ |. +|+||++..
T Consensus 367 ~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~~~~~irl~--PpL~it~~~id~~ 444 (456)
T 4atq_A 367 AELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLKEGVIILTCGTYGNVIRLL--PPLVISDELLIDG 444 (456)
T ss_dssp HHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEEC--CCTTCCHHHHHHH
T ss_pred HhcccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHHCCCEEEecCCCCCEEEEE--CCCCCCHHHHHHH
Confidence 2221 11111 1111 11245568899999999865321123457765 54 799999988
Q ss_pred HHHHHHHHHH
Q psy8733 599 VKFMKEFRHK 608 (621)
Q Consensus 599 ~~~~~~~~~~ 608 (621)
++-|++--+.
T Consensus 445 l~~l~~al~a 454 (456)
T 4atq_A 445 LEVLAAAIKA 454 (456)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888765443
No 366
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=39.37 E-value=75 Score=32.20 Aligned_cols=135 Identities=13% Similarity=0.190 Sum_probs=94.3
Q ss_pred cccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q psy8733 456 AQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKS 533 (621)
Q Consensus 456 ~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~~~ka 533 (621)
-.|.+| +| ++.++.++++++...+ ....+++ ++|.+....+...|+++.+ +.+.++.+++.
T Consensus 250 ~sK~~~-~G~r~G~~~~~~~~~~~~~~-----------~~~~~~~-~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~ 312 (406)
T 4adb_A 250 TAKALG-GGFPVGALLATEECARVMTV-----------GTHGTTY-GGNPLASAVAGKVLELINT----PEMLNGVKQRH 312 (406)
T ss_dssp ECGGGG-TTSCCEEEEECHHHHHTCCT-----------TSSCCSS-TTCHHHHHHHHHHHHHHSS----HHHHHHHHHHH
T ss_pred echhhc-CCCCeEEEEEcHHHHhhhcc-----------CCcCCCC-CCCHHHHHHHHHHHHHHHh----cCHHHHHHHHH
Confidence 378888 56 8999999999876432 1223344 5667788888888887753 57777888888
Q ss_pred HHHHHHHhccC------------C-cccccCCCCC-cccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHHH
Q psy8733 534 VLLYQEIDNSD------------K-FYECPVQAGF-PLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILV 599 (621)
Q Consensus 534 ~~lY~~id~~~------------~-~~~~~v~~~~-~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~ 599 (621)
+.+.+.+++.. + |+...+.... .....|.+.+.++|+....+. .+.+|++.--.++.|+++.++
T Consensus 313 ~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~--~~~iRi~~~~~~~~e~i~~~~ 390 (406)
T 4adb_A 313 DWFVERLNTINHRYGLFSEVRGLGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAG--GNVVRFAPALNVSEEEVTTGL 390 (406)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEETTEEEEEECTTTTTCHHHHHHHHHHTTEECEESS--TTEEEECCCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCceEEEEEEEEEEEEEeCCcHHHHHHHHHHHHHCCcEEeecC--CCeEEEECCCCCCHHHHHHHH
Confidence 88888876531 1 1111111110 135668999999999876543 567999877789999999999
Q ss_pred HHHHHHHHHc
Q psy8733 600 KFMKEFRHKH 609 (621)
Q Consensus 600 ~~~~~~~~~~ 609 (621)
+-|++..++.
T Consensus 391 ~~l~~~l~~~ 400 (406)
T 4adb_A 391 DRFAAACEHF 400 (406)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887654
No 367
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=38.94 E-value=97 Score=32.16 Aligned_cols=32 Identities=9% Similarity=0.111 Sum_probs=25.3
Q ss_pred CCccceeeccC-CCHHHHHHHHHHHHHHHHHcC
Q psy8733 579 VGGIRASIYNA-ITVDEAVILVKFMKEFRHKHS 610 (621)
Q Consensus 579 ~~~~r~~~~~a-~~~~~~~~l~~~~~~~~~~~~ 610 (621)
.+.||++.=.. ++.|+++.+++.|+++.++..
T Consensus 400 ~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 400 LETVRLTIPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp CCEEEEECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred CCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 36799985333 899999999999999877543
No 368
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=38.84 E-value=73 Score=32.22 Aligned_cols=127 Identities=17% Similarity=0.204 Sum_probs=91.3
Q ss_pred ccccc--CCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHHHHHHHH
Q psy8733 458 KNIGP--AGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVL 535 (621)
Q Consensus 458 k~~Gp--aGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~~~ka~~ 535 (621)
|.+|+ -.++.++.++++++...+ .....++ ++|.+....+...|+.+.+ +.+.++.+++.+.
T Consensus 251 K~l~gG~~~~G~~~~~~~~~~~~~~-----------~~~~~~~-~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~ 314 (392)
T 3ruy_A 251 KALGGGVFPISCAAANRDILGVFEP-----------GSHGSTF-GGNPLACAVSIAALEVLEE----EKLTERSLQLGEK 314 (392)
T ss_dssp GGGGTTTSCCEEEEECHHHHTTCCT-----------TSSCCSS-TTCHHHHHHHHHHHHHHHH----TTHHHHHHHHHHH
T ss_pred hhhhCChhhhEEEEECHHHHhhhcc-----------CCcCCCC-CCCHHHHHHHHHHHHHHHh----hhHHHHHHHHHHH
Confidence 66766 238899999998866432 1222233 7788899999999998765 4567778888899
Q ss_pred HHHHHhccC-----------CcccccCCCCCcccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHHHHHHHH
Q psy8733 536 LYQEIDNSD-----------KFYECPVQAGFPLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKFMKE 604 (621)
Q Consensus 536 lY~~id~~~-----------~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~~~~~~ 604 (621)
+.+.+.+.. .|+...+.. ....|.+.+.++||....|. .+.||++.--.++.|+++.+++.|++
T Consensus 315 l~~~L~~~~~~~~~~~~~~g~~~~~~~~~---~~~~l~~~l~~~gi~v~~~~--~~~iRi~~~~~~~~~~i~~~~~~l~~ 389 (392)
T 3ruy_A 315 LVGQLKEIDNPMITEVRGKGLFIGIELNE---PARPYCEQLKAAGLLCKETH--ENVIRIAPPLVISEEDLEWAFQKIKA 389 (392)
T ss_dssp HHHHHTTCCCTTEEEEEEETTEEEEEESS---CSHHHHHHHHTTTEECCCBT--TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCceEEEeeeeEEEEEEcc---hHHHHHHHHHHCCcEEecCC--CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 999987642 111111111 34668889999999877653 57799998778999999999999887
Q ss_pred H
Q psy8733 605 F 605 (621)
Q Consensus 605 ~ 605 (621)
.
T Consensus 390 ~ 390 (392)
T 3ruy_A 390 V 390 (392)
T ss_dssp H
T ss_pred H
Confidence 5
No 369
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=38.48 E-value=12 Score=37.91 Aligned_cols=140 Identities=12% Similarity=0.060 Sum_probs=90.8
Q ss_pred HHHhhcccccccCC--cEEeee-cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIV-REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv-~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
++..|..|.+|++| ++.++. ++++++... . ......+.|||.+..+.+...|+... ..++.+.+
T Consensus 223 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~ 289 (383)
T 3kax_A 223 ITCMAPSKTFNIAGLQASIIIIPNEKLRQAFT----------S-IQYRQGFHGLNIFAYTAMQSAYTECN--DWLNEIRF 289 (383)
T ss_dssp EEEECSHHHHTCGGGCCEEEECCCHHHHHHHH----------H-HHHHTTCCCCCHHHHHHHHHHTTTCH--HHHHHHHH
T ss_pred EEEEEChhhccCcchhheEEEeCCHHHHHHHH----------H-HHhhcccCCCCHHHHHHHHHHHHhhH--HHHHHHHH
Confidence 55667789999776 566777 677766521 1 11122356889998888877776422 23677778
Q ss_pred HHHHHHHHHHHHHhc-cCCc---------cc-ccCCCCCcccHHHHHHHH-HccCccccC--CCC--CCccceeeccCCC
Q psy8733 528 NSLQKSVLLYQEIDN-SDKF---------YE-CPVQAGFPLDELFLKEAK-AHNMIQLKG--HRL--VGGIRASIYNAIT 591 (621)
Q Consensus 528 ~~~~ka~~lY~~id~-~~~~---------~~-~~v~~~~~~~~~~~~~~~-~~~i~~~~g--~~~--~~~~r~~~~~a~~ 591 (621)
+.+++.+.+.+.+.+ .+++ +. ..+........+|.+.+. ++||....| ++. .+.+|++.= .+
T Consensus 290 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~--~~ 367 (383)
T 3kax_A 290 YIEDNAKFACEYIKDHIPTLSVMKPEGSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIG--CP 367 (383)
T ss_dssp HHHHHHHHHHHHHHHHCTTCEECCCSBSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECS--SC
T ss_pred HHHHHHHHHHHHHHhhCCCceEecCCceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEc--CC
Confidence 888889999999987 3432 11 001100012345788886 789987655 444 466999843 58
Q ss_pred HHHHHHHHHHHHHH
Q psy8733 592 VDEAVILVKFMKEF 605 (621)
Q Consensus 592 ~~~~~~l~~~~~~~ 605 (621)
.|+++.+++-|+++
T Consensus 368 ~~~i~~~l~~l~~~ 381 (383)
T 3kax_A 368 RSVLEEILNRLRHT 381 (383)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99988888887764
No 370
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=37.52 E-value=8.1 Score=40.33 Aligned_cols=143 Identities=13% Similarity=0.130 Sum_probs=90.5
Q ss_pred HHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
++..|..|.+| +| ++.++.++++++.... .....+ -++|.++.+.+...|+.......++.+.++
T Consensus 253 i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~-----------~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 319 (425)
T 1vp4_A 253 VLLNTFSKVLA-PGLRIGMVAGSKEFIRKIVQ-----------AKQSAD-LCSPAITHRLAARYLERYDLLEQLKPTIEL 319 (425)
T ss_dssp EEEEESTTTTC-GGGCEEEEECCHHHHHHHHH-----------HHHHHH-SSCCHHHHHHHHHHHHHSCHHHHTHHHHHH
T ss_pred EEEeccccccc-cccceEEEeeCHHHHHHHHH-----------Hhhhhc-CCCCHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 45668889999 78 5999999998765321 011112 245778888777777642112346777888
Q ss_pred HHHHHHHHHHHHhcc-C---CcccccCCCC--------Cc-ccHHHHHHHHHccCccccC--CCC----CCccceeeccC
Q psy8733 529 SLQKSVLLYQEIDNS-D---KFYECPVQAG--------FP-LDELFLKEAKAHNMIQLKG--HRL----VGGIRASIYNA 589 (621)
Q Consensus 529 ~~~ka~~lY~~id~~-~---~~~~~~v~~~--------~~-~~~~~~~~~~~~~i~~~~g--~~~----~~~~r~~~~~a 589 (621)
.+++.+.+.+.+++. + ++-......+ .. -..+|.+.+.++||....| +.. .+.||++. ..
T Consensus 320 ~~~~~~~l~~~L~~~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~-~~ 398 (425)
T 1vp4_A 320 YRRKRTVMLNALEEYFSDIPGVKWVKSEGGLFIWLTLPEGFDTWEMFEYAKRKKVFYVPGRVFKVYDEPSPSMRLSF-CL 398 (425)
T ss_dssp HHHHHHHHHHHHHHHSTTSTTCEECCCSBSSEEEEECCTTCCTTTTHHHHHHHTEECEEGGGGCTTCCCCSEEEEEC-SS
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEecCCccEEEEEEcCCCCCHHHHHHHHHHCCCEEECchhhcCCCCCCCeEEEEe-CC
Confidence 888999999998764 2 2211000100 01 1345778888889986554 432 46699984 44
Q ss_pred CCHHHHHHHHHHHHHHHH
Q psy8733 590 ITVDEAVILVKFMKEFRH 607 (621)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~ 607 (621)
.+.|+++.+++-|+++.+
T Consensus 399 ~~~e~i~~~l~~l~~~l~ 416 (425)
T 1vp4_A 399 PPDEKIVEGIKRLREVVL 416 (425)
T ss_dssp SCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH
Confidence 589998888887776554
No 371
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=37.21 E-value=28 Score=36.18 Aligned_cols=144 Identities=15% Similarity=0.145 Sum_probs=95.5
Q ss_pred HHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhc---CChHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQ---GGLAKM 525 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~---gg~~~~ 525 (621)
++..|..|.+| +| ++.++.++++++... . .. ..+..++|.++.+.+...|+.+.+. .-++.+
T Consensus 256 i~~~s~SK~~~-~GlRiG~~~~~~~l~~~l~----------~-~~-~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 322 (425)
T 2r2n_A 256 IRADSFSKIIS-SGLRIGFLTGPKPLIERVI----------L-HI-QVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRV 322 (425)
T ss_dssp EEEEESTTTTC-STTCCEEEEEEHHHHHHHH----------H-HH-HTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEccchhhcc-CccceEEEecCHHHHHHHH----------H-HH-HHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHH
Confidence 55678889999 78 588999999876532 1 11 1223467888888888877754321 235667
Q ss_pred HHHHHHHHHHHHHHHhcc-CCcccccC-CCC--------C-cccHH-HHHHHHHccCccccC--CCC-----CCccceee
Q psy8733 526 EQNSLQKSVLLYQEIDNS-DKFYECPV-QAG--------F-PLDEL-FLKEAKAHNMIQLKG--HRL-----VGGIRASI 586 (621)
Q Consensus 526 ~~~~~~ka~~lY~~id~~-~~~~~~~v-~~~--------~-~~~~~-~~~~~~~~~i~~~~g--~~~-----~~~~r~~~ 586 (621)
.++-+++.+.+.+.+++. +++..... ..+ . ....+ +.+.++++|+....| ++. .+.||++
T Consensus 323 ~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~~~~iRis- 401 (425)
T 2r2n_A 323 IDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRAS- 401 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTCSCCHHHHHTHHHHTTEECEEGGGGSSSTTSCCCEEEEE-
T ss_pred HHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCCCCHHHHHHHHHHHCCcEEechhhhcCCCCCCCCEEEEE-
Confidence 777888899999998873 44321111 111 1 12345 478888999986554 332 3569999
Q ss_pred ccCCCHHHHHHHHHHHHHHHHH
Q psy8733 587 YNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 587 ~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
|...+.|+++.+++-|+++.++
T Consensus 402 ~~~~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 402 FSSASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHHHHHHHHH
Confidence 4457999999999999887654
No 372
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=36.60 E-value=14 Score=38.41 Aligned_cols=144 Identities=10% Similarity=0.092 Sum_probs=91.8
Q ss_pred HHHhhcccccccCCc--EEeee-cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHH-hcCChHHHH
Q psy8733 451 VIIAGAQKNIGPAGI--TVVIV-REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK-RQGGLAKME 526 (621)
Q Consensus 451 ~~~a~~qk~~GpaGl--~v~iv-~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~-~~gg~~~~~ 526 (621)
++..|..|.+|.+|+ +.++. ++++++... .. ..+.++|.++..++...|+... -...++.+.
T Consensus 261 iv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~----------~~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 326 (428)
T 1iay_A 261 HIVYSLSKDMGLPGFRVGIIYSFNDDVVNCAR----------KM----SSFGLVSTQTQYFLAAMLSDEKFVDNFLRESA 326 (428)
T ss_dssp EEEEESTTTSSCGGGCEEEEEESCHHHHHHHH----------HH----HTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred EEEecchhhcCCCCceEEEEEeCCHHHHHHHH----------HH----HhcccCCHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 345677899998886 88888 677776532 11 1224567777777666665321 011466788
Q ss_pred HHHHHHHHHHHHHHhccC--------Ccccc-cCCCCC-----cccHHHHHHHHHc-cCccccCC--CC--CCccceeec
Q psy8733 527 QNSLQKSVLLYQEIDNSD--------KFYEC-PVQAGF-----PLDELFLKEAKAH-NMIQLKGH--RL--VGGIRASIY 587 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~--------~~~~~-~v~~~~-----~~~~~~~~~~~~~-~i~~~~g~--~~--~~~~r~~~~ 587 (621)
++.+++.+.+.+.+++.. ++|.. .+.+.. .....+.+.+.++ ||....|. .. .+.||++.=
T Consensus 327 ~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~ 406 (428)
T 1iay_A 327 MRLGKRHKHFTNGLEVVGIKCLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFA 406 (428)
T ss_dssp HHHHHHHHHHHHHHHHTTCCBCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECS
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEe
Confidence 888899999999998641 11110 110000 0123577777765 99865543 32 456999974
Q ss_pred cCCCHHHHHHHHHHHHHHHHHc
Q psy8733 588 NAITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 588 ~a~~~~~~~~l~~~~~~~~~~~ 609 (621)
.++.|+++.+++.|+++.+++
T Consensus 407 -~~~~e~i~~~~~~l~~~l~~~ 427 (428)
T 1iay_A 407 -NMDDGTVDIALARIRRFVGVE 427 (428)
T ss_dssp -SSCHHHHHHHHHHHHHHHHTT
T ss_pred -cCCHHHHHHHHHHHHHHHhcc
Confidence 689999999999999887654
No 373
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=35.91 E-value=93 Score=31.77 Aligned_cols=137 Identities=12% Similarity=0.090 Sum_probs=90.0
Q ss_pred hcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q psy8733 455 GAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQK 532 (621)
Q Consensus 455 ~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~~~k 532 (621)
+..|.+|+ | ++.++.++++++...+ .....++ ++|.++...+...|+++.+. .+.++.++.
T Consensus 265 s~sK~~~~-GlriG~~~~~~~~~~~l~~-----------~~~~~~~-~~~~~~~~a~~aal~~~~~~----~~~~~~~~~ 327 (426)
T 1sff_A 265 TFAKSIAG-GFPLAGVTGRAEVMDAVAP-----------GGLGGTY-AGNPIACVAALEVLKVFEQE----NLLQKANDL 327 (426)
T ss_dssp EECGGGGT-SSCCEEEEEEHHHHTTSCT-----------TSBCCSS-SSCHHHHHHHHHHHHHHHHT----THHHHHHHH
T ss_pred EEcccccC-CCceEEEEEcHHHHhhhcc-----------CCcCcCC-CCCHHHHHHHHHHHHHHHhc----CHHHHHHHH
Confidence 66799998 8 5999999998865321 1112333 46778888888899988763 344555556
Q ss_pred HHHHHHHHhc----cC--------Ccc-cccCCC------CCc-ccHHHHHHHHHccCccccCCCCCCccceeeccCCCH
Q psy8733 533 SVLLYQEIDN----SD--------KFY-ECPVQA------GFP-LDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITV 592 (621)
Q Consensus 533 a~~lY~~id~----~~--------~~~-~~~v~~------~~~-~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~ 592 (621)
.+.+.+.+++ .+ +++ -..+.+ ... ....|.+.+.++||....|....+.||++.=-.++.
T Consensus 328 ~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~iRi~~~~~~~~ 407 (426)
T 1sff_A 328 GQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIED 407 (426)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEEEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCCTTCCH
T ss_pred HHHHHHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCCCCCEEEEECCccCCH
Confidence 6666666554 12 111 111110 001 234588888899999776654467799985448999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy8733 593 DEAVILVKFMKEFRHK 608 (621)
Q Consensus 593 ~~~~~l~~~~~~~~~~ 608 (621)
|+++.+++.|++..++
T Consensus 408 ~~i~~~~~~l~~~l~~ 423 (426)
T 1sff_A 408 AQIRQGLEIISQCFDE 423 (426)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999887654
No 374
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=35.91 E-value=11 Score=38.81 Aligned_cols=143 Identities=12% Similarity=0.134 Sum_probs=90.1
Q ss_pred HHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
++..|..|.+| +| ++.++.++++++...+ .....++.+ |.++.+.+...|+.... ..++.+.++
T Consensus 231 i~~~s~sK~~~-~G~r~G~~~~~~~~~~~l~~-----------~~~~~~~~~-~~~~~~a~~~~l~~~~~-~~~~~~~~~ 296 (397)
T 2zyj_A 231 IYLGSFSKVLS-PGLRVAFAVAHPEALQKLVQ-----------AKQGADLHT-PMLNQMLVHELLKEGFS-ERLERVRRV 296 (397)
T ss_dssp EEEEESTTTTC-GGGCCEEEECCHHHHHHHHH-----------HHHHHHSSC-CHHHHHHHHHHHTTTHH-HHHHHHHHH
T ss_pred EEEeccccccc-ccceeEEEecCHHHHHHHHH-----------HHHhhcCCC-CHHHHHHHHHHHHhCCH-HHHHHHHHH
Confidence 44578899999 66 6999999998765321 111122344 66667766555542110 246777788
Q ss_pred HHHHHHHHHHHHhcc-C-CcccccCCCC--------Cc-ccHHHHHHHHHccCccccC--CC----CCCccceeeccCCC
Q psy8733 529 SLQKSVLLYQEIDNS-D-KFYECPVQAG--------FP-LDELFLKEAKAHNMIQLKG--HR----LVGGIRASIYNAIT 591 (621)
Q Consensus 529 ~~~ka~~lY~~id~~-~-~~~~~~v~~~--------~~-~~~~~~~~~~~~~i~~~~g--~~----~~~~~r~~~~~a~~ 591 (621)
.+++.+.+.+.+++. + ++-......+ .. ...+|.+.+.++||....| ++ ..+.||++. ...+
T Consensus 297 ~~~~~~~l~~~L~~~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~~iRis~-~~~~ 375 (397)
T 2zyj_A 297 YREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELPKGLSAEGLFRRALEENVAFVPGGPFFANGGGENTLRLSY-ATLD 375 (397)
T ss_dssp HHHHHHHHHHHHHHHSCTTSEECCCSBSSEEEEECSTTCCHHHHHHHHHHTTEEEEESGGGCTTSCCTTEEEEEC-SSSC
T ss_pred HHHHHHHHHHHHHHHCCCCeEEccCCccEEEEEEcCCCCCHHHHHHHHHHCCCEEechHHhcCCCCCCCeEEEEc-CCCC
Confidence 888999999998763 3 2211000110 11 2356888999999996555 43 246699984 4458
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy8733 592 VDEAVILVKFMKEFRHK 608 (621)
Q Consensus 592 ~~~~~~l~~~~~~~~~~ 608 (621)
.|+++.+++-|++..++
T Consensus 376 ~~~i~~~~~~l~~~l~~ 392 (397)
T 2zyj_A 376 REGIAEGVRRLGRALKG 392 (397)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999998888876654
No 375
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=35.00 E-value=16 Score=37.55 Aligned_cols=142 Identities=11% Similarity=0.138 Sum_probs=93.4
Q ss_pred HHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHH-----hcCCh
Q psy8733 450 GVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK-----RQGGL 522 (621)
Q Consensus 450 ~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~-----~~gg~ 522 (621)
.++..|..|.+|++| ++.++.++++++... . ... .+..++|.+..+.+...|+... ....+
T Consensus 239 ~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~----------~-~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 306 (422)
T 3fvs_A 239 TLTIGSAGKTFSATGWKVGWVLGPDHIMKHLR----------T-VHQ-NSVFHCPTQSQAAVAESFEREQLLFRQPSSYF 306 (422)
T ss_dssp EEEEEEHHHHHTCGGGCCEEEECCHHHHHHHH----------H-HHH-TTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHH
T ss_pred EEEEecchhccCCccceEEEEEeCHHHHHHHH----------H-HHh-hccCCCCcHHHHHHHHHHhhccccccchHHHH
Confidence 355667789999776 788999998876531 1 111 2234567788888888877421 13457
Q ss_pred HHHHHHHHHHHHHHHHHHhccCCcccccCCC-CC----cc------------------cHHHHHH-HHHccCccccCCC-
Q psy8733 523 AKMEQNSLQKSVLLYQEIDNSDKFYECPVQA-GF----PL------------------DELFLKE-AKAHNMIQLKGHR- 577 (621)
Q Consensus 523 ~~~~~~~~~ka~~lY~~id~~~~~~~~~v~~-~~----~~------------------~~~~~~~-~~~~~i~~~~g~~- 577 (621)
+.+.++.+++.+.+.+.+.+. ++ ...... +. ++ ..+|.+. ++++|+....|..
T Consensus 307 ~~~~~~~~~~~~~l~~~L~~~-g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f 384 (422)
T 3fvs_A 307 VQFPQAMQRCRDHMIRSLQSV-GL-KPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIF 384 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-TC-EEEBCSBSSEEEEECHHHHHHCCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CC-eecCCCeeeEEEEechhhcccccccccccccccHHHHHHHHHHhcCEEEeCcHHh
Confidence 788888999999999999875 22 111111 00 00 3356554 6678998655442
Q ss_pred --------CCCccceeeccCCCHHHHHHHHHHHHHHHH
Q psy8733 578 --------LVGGIRASIYNAITVDEAVILVKFMKEFRH 607 (621)
Q Consensus 578 --------~~~~~r~~~~~a~~~~~~~~l~~~~~~~~~ 607 (621)
..+.||++ | +.+.|+++..++-|+++.+
T Consensus 385 ~~~~~~~~~~~~iRis-~-~~~~e~i~~~l~~l~~~l~ 420 (422)
T 3fvs_A 385 YSVPHQKHFDHYIRFC-F-VKDEATLQAMDEKLRKWKV 420 (422)
T ss_dssp SCHHHHTTSCSEEEEE-C-CCCHHHHHHHHHHHHHHHH
T ss_pred cCCcCCCCCCCeEEEE-e-cCCHHHHHHHHHHHHHHHh
Confidence 25679999 3 3499999999998888754
No 376
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=34.56 E-value=25 Score=36.23 Aligned_cols=143 Identities=7% Similarity=-0.024 Sum_probs=96.4
Q ss_pred HHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHH
Q psy8733 450 GVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNS 529 (621)
Q Consensus 450 ~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~ 529 (621)
|++..+..|.+|+.| ++++.++++++.... .........++|.+.+..+-..++++.+. +.+.++.
T Consensus 248 di~~~s~sK~~~~~g-g~v~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~aa~~aal~~~~~~---~~~~~~~ 313 (409)
T 3kki_A 248 HFMTASLAKTFAYRA-GAIWCNNEVNRCVPF----------ISYPAIFSSTLLPYEAAGLETTLEIIESA---DNRRQHL 313 (409)
T ss_dssp SEEEEESSSTTCSSC-EEEEESSSGGGTHHH----------HCHHHHHSBCCCHHHHHHHHHHHHHHHHC---HHHHHHH
T ss_pred CEEEeecchhhCCCc-eEEEECHHHHHHHHH----------hCcCccccCCCcHHHHHHHHHHHHHHhcC---HHHHHHH
Confidence 455677789999775 888888887754211 01110011236667777777788888653 6788888
Q ss_pred HHHHHHHHHHHhccCCcccccCCCC--------Cc-ccHHHHHHHHHccCccccCC-----CCCCccceeeccCCCHHHH
Q psy8733 530 LQKSVLLYQEIDNSDKFYECPVQAG--------FP-LDELFLKEAKAHNMIQLKGH-----RLVGGIRASIYNAITVDEA 595 (621)
Q Consensus 530 ~~ka~~lY~~id~~~~~~~~~v~~~--------~~-~~~~~~~~~~~~~i~~~~g~-----~~~~~~r~~~~~a~~~~~~ 595 (621)
+++.+.+.+.+.+.. + ..+ ..+ .. ....|.+.+.++|+....+. ...+.||++.-..++.|++
T Consensus 314 ~~~~~~l~~~L~~~g-~-~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i 390 (409)
T 3kki_A 314 DRMARKLRIGLSQLG-L-TIR-SESQIIGLETGDERNTEKVRDYLESNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQI 390 (409)
T ss_dssp HHHHHHHHHHHHTTT-C-CCC-CSSSEEEEEEESHHHHHHHHHHHHHTTEECEEECTTSSCTTCEEEEEECCTTCCHHHH
T ss_pred HHHHHHHHHHHHHcC-C-ccC-CCCCEEEEEeCCHHHHHHHHHHHHHCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHH
Confidence 899999999998652 1 111 111 11 23458888999999854322 1245699999889999999
Q ss_pred HHHHHHHHHHHHHc
Q psy8733 596 VILVKFMKEFRHKH 609 (621)
Q Consensus 596 ~~l~~~~~~~~~~~ 609 (621)
+++++.|++..++.
T Consensus 391 ~~~~~~l~~~l~~~ 404 (409)
T 3kki_A 391 AKIIEVCSDAVNYG 404 (409)
T ss_dssp HHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999887653
No 377
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=34.53 E-value=7.8 Score=39.43 Aligned_cols=139 Identities=12% Similarity=0.061 Sum_probs=90.0
Q ss_pred HHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 450 GVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 450 ~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
+++..|..|.+|++| ++.++.++++++.... ... .+..++|.+..+.+...|+.. ...++.+.+
T Consensus 222 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~-----------~~~-~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~ 287 (376)
T 2dou_A 222 VVELFSLSKSYNLAGFRLGFALGSEEALARLER-----------VKG-VIDFNQYAGVLRMGVEALKTP--KEVVRGYAR 287 (376)
T ss_dssp EEEEEEHHHHHTCGGGCCEEEEECHHHHHHHHH-----------HHH-HHCCCSCHHHHHHHHHHHTSC--HHHHHHHHH
T ss_pred EEEEecchhhcCChhheeEEEecCHHHHHHHHH-----------HHH-hcccCCCHHHHHHHHHHHhCc--HHHHHHHHH
Confidence 355678889999777 5889999998765321 111 112356777777766666532 234677778
Q ss_pred HHHHHHHHHHHHHhcc-------CCcccc-cCCCCCcccHHHHHHHHHccCccccC--CCC--CCccceeeccCCCHHHH
Q psy8733 528 NSLQKSVLLYQEIDNS-------DKFYEC-PVQAGFPLDELFLKEAKAHNMIQLKG--HRL--VGGIRASIYNAITVDEA 595 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~-------~~~~~~-~v~~~~~~~~~~~~~~~~~~i~~~~g--~~~--~~~~r~~~~~a~~~~~~ 595 (621)
+.+++.+.+.+.+++. .+||.. .+.++ .....|.+.+.++||....| ++. .+.||++. +.+.|++
T Consensus 288 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~f~~~~~~~~Ris~--~~~~~~i 364 (376)
T 2dou_A 288 VYRERALGMAEALKGVLSLLPPRATMYLWGRLPEG-VDDLEFGLRLVERGVALAPGRGFGPGGKGFVRIAL--VRPLEEL 364 (376)
T ss_dssp HHHHHHHHHHHHHTTTSEECCCCBSSEEEEECCTT-CCHHHHHHHHHHTTEECEEGGGGCGGGTTEEEEEC--CSCHHHH
T ss_pred HHHHHHHHHHHHHHHhcCccCCCeeEEEEEECCCC-CCHHHHHHHHHHCCEEEcCchhhCCCCCCeEEEEe--cCCHHHH
Confidence 8889999999998763 123221 11111 12356888888999986554 332 56799994 3488888
Q ss_pred HHHHHHHHHH
Q psy8733 596 VILVKFMKEF 605 (621)
Q Consensus 596 ~~l~~~~~~~ 605 (621)
+.+++-|+++
T Consensus 365 ~~~l~~l~~~ 374 (376)
T 2dou_A 365 LEAAKRIREA 374 (376)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHH
Confidence 8888777653
No 378
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=33.96 E-value=80 Score=31.08 Aligned_cols=135 Identities=13% Similarity=0.006 Sum_probs=83.5
Q ss_pred HHHHHhhcccccc-cCC--cEEeeecH-hHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHH
Q psy8733 449 FGVIIAGAQKNIG-PAG--ITVVIVRE-DLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAK 524 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paG--l~v~iv~~-~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~ 524 (621)
.|++..|..|.+| |.| +++++.++ +++++..+. .... ...++|.+..|.+...++|+.+
T Consensus 136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~~~~~~~l~~~----------~~~~-~~~~~~~~~~~~~~~~l~~~~~------ 198 (331)
T 1pff_A 136 VDIVVHSATKYINGHTDVVAGLVCSRADIIAKVKSQG----------IKDI-TGAIISPHDAWLITRGTLTLDM------ 198 (331)
T ss_dssp CSEEEEETTTTTSSSSSCCCEEEEECHHHHHHHHHTC----------CCCC-CCCCCCHHHHHHHHHHHHHHHH------
T ss_pred CcEEEEECccccCCCCCceEEEEEeCcHHHHHHHHHH----------HHhh-cCCCCCHHHHHHHHcCcchHHH------
Confidence 3556678899998 555 78899998 887653221 1000 2246788888888788887642
Q ss_pred HHHHHHHHHHHHHHHHhccCC---------------------------cccccCCCCCcccHHHHHHHHHccCccccC--
Q psy8733 525 MEQNSLQKSVLLYQEIDNSDK---------------------------FYECPVQAGFPLDELFLKEAKAHNMIQLKG-- 575 (621)
Q Consensus 525 ~~~~~~~ka~~lY~~id~~~~---------------------------~~~~~v~~~~~~~~~~~~~~~~~~i~~~~g-- 575 (621)
..++-.+..+.+.+++.+.+. ++...+ .-.+.+.+.++++||....+
T Consensus 199 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~gI~~~~~s~ 274 (331)
T 1pff_A 199 RVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDV----DGLEKAKKVLDNCHVVSLAVSL 274 (331)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEEC----SSHHHHHHHHHTCSSSEECSSC
T ss_pred HHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEE----CCHHHHHHHHHhCCCceeccCC
Confidence 112233344455555543321 111111 11245778888999964221
Q ss_pred --------------C-----------CC-CCccceeeccCCCHHHHHHHHHHHHH
Q psy8733 576 --------------H-----------RL-VGGIRASIYNAITVDEAVILVKFMKE 604 (621)
Q Consensus 576 --------------~-----------~~-~~~~r~~~~~a~~~~~~~~l~~~~~~ 604 (621)
| +. .+.+|++.-..++.|+++.|++.|++
T Consensus 275 g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~ 329 (331)
T 1pff_A 275 GGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDL 329 (331)
T ss_dssp CSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred CCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHH
Confidence 1 11 47799999999999999999998874
No 379
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=33.45 E-value=21 Score=36.45 Aligned_cols=141 Identities=13% Similarity=0.131 Sum_probs=90.7
Q ss_pred HHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHH-----hcCChH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIK-----RQGGLA 523 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~-----~~gg~~ 523 (621)
++..|..|.+|++| ++.++.++++++... . ... .+..++|.+..+.+...|+... ....++
T Consensus 233 i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~----------~-~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 300 (410)
T 3e2y_A 233 ITIGSAGKTFSVTGWKLGWSIGPAHLIKHLQ----------T-VQQ-NSFYTCATPLQAALAEAFWIDIKRMDDPECYFN 300 (410)
T ss_dssp EEEEEHHHHSSCGGGCCEEEECCHHHHHHHH----------H-HHH-TTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHH
T ss_pred EEEecchhhcCCCCceEEEEEECHHHHHHHH----------H-HHH-hhccCCChHHHHHHHHHHHhhhccccchHHHHH
Confidence 55667789999776 788999999886531 1 111 2344567778888877776311 133467
Q ss_pred HHHHHHHHHHHHHHHHHhccC--------Cccccc-CCC-CCcc---------cHHHHH-HHHHccCccccCCCC-----
Q psy8733 524 KMEQNSLQKSVLLYQEIDNSD--------KFYECP-VQA-GFPL---------DELFLK-EAKAHNMIQLKGHRL----- 578 (621)
Q Consensus 524 ~~~~~~~~ka~~lY~~id~~~--------~~~~~~-v~~-~~~~---------~~~~~~-~~~~~~i~~~~g~~~----- 578 (621)
.+.++.+++.+.+.+.+++.. +||... +.. ...+ +.+|.+ .++++|+....|...
T Consensus 301 ~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~ 380 (410)
T 3e2y_A 301 SLPKELEVKRDRMVRLLNSVGLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKS 380 (410)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEBCSBSSEEEEECGGGCCCCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHCCCeecCCCccEEEEEEchhhhcccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCC
Confidence 788888899999999998652 222210 100 0001 125555 457889987655422
Q ss_pred ----CCccceeeccCCCHHHHHHHHHHHHHH
Q psy8733 579 ----VGGIRASIYNAITVDEAVILVKFMKEF 605 (621)
Q Consensus 579 ----~~~~r~~~~~a~~~~~~~~l~~~~~~~ 605 (621)
.+.||++ | +++.|+++.+++-|++|
T Consensus 381 ~~~~~~~iRis-~-~~~~e~l~~~l~~l~~~ 409 (410)
T 3e2y_A 381 KPHFEKLVRFC-F-IKKDSTLDAAEEIFRAW 409 (410)
T ss_dssp HHHHTTEEEEE-C-CCCHHHHHHHHHHHHTC
T ss_pred CCCCCCEEEEE-E-cCCHHHHHHHHHHHHhc
Confidence 4679999 3 45999999999888764
No 380
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=32.48 E-value=24 Score=35.61 Aligned_cols=137 Identities=12% Similarity=0.043 Sum_probs=92.7
Q ss_pred HHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
++..|..|.+|++| ++.++.++++++... . ... ....|+|.+..+.+...|+. ...++.+.++
T Consensus 224 i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~----------~-~~~-~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~ 288 (376)
T 3ezs_A 224 LVIHSLSKRSSAPGLRSGFIAGDSRLLEKYK----------A-FRA-YLGYTSANAIQKASEAAWLD---DRHAEFFRNI 288 (376)
T ss_dssp EEEEESTTTTTCGGGCCEEEEECHHHHHHHH----------H-HHT-TTCCCCCHHHHHHHHHHHHC---SHHHHHHHHH
T ss_pred EEEecchhccCCccceeEEEeeCHHHHHHHH----------H-HHh-hhcCCCChHHHHHHHHHHhC---cHHHHHHHHH
Confidence 45567789999776 688888998876531 1 111 22346788888888877774 3347888888
Q ss_pred HHHHHHHHHHHHhccCCcccccCCCC------CcccHHHHHHHHH-ccCccccCC--C----CCCccceeeccCCCHHHH
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPVQAG------FPLDELFLKEAKA-HNMIQLKGH--R----LVGGIRASIYNAITVDEA 595 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v~~~------~~~~~~~~~~~~~-~~i~~~~g~--~----~~~~~r~~~~~a~~~~~~ 595 (621)
.+++.+.+.+.++ ++. .+ ..+ ......|.+.+.+ +||....|. + ..+.||++.- .+.|++
T Consensus 289 ~~~~~~~l~~~l~---~~~-~~-~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~--~~~~~i 361 (376)
T 3ezs_A 289 YANNLKLARKIFK---NTL-IY-PYSFYVYLPVQNGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALV--YDTPLL 361 (376)
T ss_dssp HHHHHHHHHHHST---TCC-CC-SBSSEEEEECSCHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECC--SCHHHH
T ss_pred HHHHHHHHHHHhc---CCC-CC-CcceEEEEECCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEc--CCHHHH
Confidence 8999999999886 221 11 111 0123567777776 899965543 3 2567999843 499999
Q ss_pred HHHHHHHHHHHHHc
Q psy8733 596 VILVKFMKEFRHKH 609 (621)
Q Consensus 596 ~~l~~~~~~~~~~~ 609 (621)
+.+++-|+++.++|
T Consensus 362 ~~~l~~l~~~l~~~ 375 (376)
T 3ezs_A 362 EKPLEIIETYRENH 375 (376)
T ss_dssp HHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHhc
Confidence 99999998876543
No 381
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=32.39 E-value=18 Score=36.04 Aligned_cols=144 Identities=13% Similarity=0.037 Sum_probs=92.7
Q ss_pred HHHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 449 FGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
.|+++.|..|..+|-|.++++.+++++++... +..+. + ..+.++ .+.+..+++++.+ +....+.++
T Consensus 203 ~d~~~~s~sK~g~~~G~g~~~~~~~~~~~~~~-------~~~~~--~-~~~~~~---~~~~~~~~~~l~~-~~~~~~~~~ 268 (356)
T 1v72_A 203 VDALSFGATKNGVLAAEAIVLFNTSLATEMSY-------RRKRA--G-HLSSKM---RFLSAQIDAYLTD-DLWLRNARK 268 (356)
T ss_dssp CCEEEECCGGGTCSSCEEEEESSGGGHHHHHH-------HHHHT--T-CCCSST---HHHHHHHHHHTST-THHHHHHHH
T ss_pred CCEEEEecccCCCcCccEEEEECHHHHhhHHH-------Hhhcc--C-chhhhH---HHHHHHHHHHHHh-hhHHHHHHH
Confidence 45666788888448888888889998865321 11111 1 122222 3334445666653 445556667
Q ss_pred HHHHHHHHHHHHhccCCcccccCCC-CC----cccHHHHHHHHHccCccccCC-CCCCccceeeccCCCHHHHHHHHHHH
Q psy8733 529 SLQKSVLLYQEIDNSDKFYECPVQA-GF----PLDELFLKEAKAHNMIQLKGH-RLVGGIRASIYNAITVDEAVILVKFM 602 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~~~~~~v~~-~~----~~~~~~~~~~~~~~i~~~~g~-~~~~~~r~~~~~a~~~~~~~~l~~~~ 602 (621)
.++..+.+++.+++.+++ ...... .. ++...|.+.+.++||....|. + .+.+|++.-..++.|+++++++.|
T Consensus 269 ~~~~~~~l~~~L~~~~g~-~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~-~~~iRi~~~~~~~~~~i~~~~~~l 346 (356)
T 1v72_A 269 ANAAAQRLAQGLEGLGGV-EVLGGTEANILFCRLDSAMIDALLKAGFGFYHDRWG-PNVVRFVTSFATTAEDVDHLLNQV 346 (356)
T ss_dssp HHHHHHHHHHHHTTCTTE-EEESCCCSSEEEEEECHHHHHHHHHTTCBCBCSSSS-TTEEEEECCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCc-EEccCCCccEEEEEcCHHHHHHHHhcCeEEeccccC-CCeEEEEecCCCCHHHHHHHHHHH
Confidence 788889999999875553 211111 11 234578888999999977654 3 567999976788999999999999
Q ss_pred HHHHHH
Q psy8733 603 KEFRHK 608 (621)
Q Consensus 603 ~~~~~~ 608 (621)
+++.++
T Consensus 347 ~~~l~~ 352 (356)
T 1v72_A 347 RLAADR 352 (356)
T ss_dssp HHTC--
T ss_pred HHHHHh
Confidence 887543
No 382
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=31.61 E-value=43 Score=34.15 Aligned_cols=146 Identities=12% Similarity=0.122 Sum_probs=93.0
Q ss_pred HHHHHhhcccccc-cCCcEEeeec-HhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 449 FGVIIAGAQKNIG-PAGITVVIVR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl~v~iv~-~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
.|++..|..|.++ |-| ++++.+ +++.++.. . .....+..+|+...+..+...+..+.+ .+++.+.
T Consensus 218 ~di~~~s~sK~l~g~~~-G~~~~~~~~~~~~~~----------~-~~~~~~~~~~~~~~~aa~~~a~~~~~~-~~~~~~~ 284 (417)
T 3n0l_A 218 AHVVSSTTHKTLRGPRG-GIIMTNDEELAKKIN----------S-AIFPGIQGGPLMHVIAAKAVGFKFNLS-DEWKVYA 284 (417)
T ss_dssp CSEEEEESSTTTCSCSC-EEEEESCHHHHHHHH----------H-HHTTTTCSSCCHHHHHHHHHHHHHHTS-HHHHHHH
T ss_pred ceEEEeeCccccCCCCe-eEEEECCHHHHHHHh----------h-hhCCcccCCcHHHHHHHHHHHHHHHHh-hhHHHHH
Confidence 4677788889983 555 778887 67766531 1 122334567887777666666655332 2467888
Q ss_pred HHHHHHHHHHHHHHhccCCccccc---------CC-CCCc-ccHHHHHHHHHccCccccCCC--------CCCccceee-
Q psy8733 527 QNSLQKSVLLYQEIDNSDKFYECP---------VQ-AGFP-LDELFLKEAKAHNMIQLKGHR--------LVGGIRASI- 586 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~~~~~~~---------v~-~~~~-~~~~~~~~~~~~~i~~~~g~~--------~~~~~r~~~- 586 (621)
++..+.++.+.+.+.+ .++-..+ +. +... ....+.+.++++||....++. ..+++|++.
T Consensus 285 ~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~ 363 (417)
T 3n0l_A 285 KQVRTNAQVLANVLMD-RKFKLVSDGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTP 363 (417)
T ss_dssp HHHHHHHHHHHHHHHH-TTCEEGGGSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECH
T ss_pred HHHHHHHHHHHHHHHh-CCceeccCCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCH
Confidence 8888889999999987 3321111 00 0111 234467788889998654331 135589874
Q ss_pred ---ccCCCHHHHHHHHHHHHHHHHH
Q psy8733 587 ---YNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 587 ---~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
...++.|+++.+++.|++..+.
T Consensus 364 ~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 364 ALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred HHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 2347889999999999887654
No 383
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=31.08 E-value=87 Score=32.46 Aligned_cols=133 Identities=12% Similarity=0.147 Sum_probs=87.7
Q ss_pred cccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q psy8733 456 AQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKS 533 (621)
Q Consensus 456 ~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~~~ka 533 (621)
--|.+| +| ++.+++++++++...+ ....++| ++|.++...+-.+|+.+.+ +.+.++.+++.
T Consensus 268 ~sK~l~-~G~~iG~~~~~~~l~~~l~~-----------~~~~~t~-~~~~~~~aa~~a~L~~~~~----~~~~~~~~~~~ 330 (420)
T 2pb2_A 268 SAKALG-GGFPVSAMLTTQEIASAFHV-----------GSHGSTY-GGNPLACAVAGAAFDIINT----PEVLQGIHTKR 330 (420)
T ss_dssp ECGGGG-TTSCCEEEEECHHHHTTCC---------------CCEE-CCCHHHHHHHHHHHHHHSS----HHHHHHHHHHH
T ss_pred eccccc-CCCceEEEEEhHHHHHhhcC-----------CCcCccc-CcCHHHHHHHHHHHHHHHh----ccHHHHHHHHH
Confidence 358888 45 8999999997765321 1123344 5677778888888887764 45677777788
Q ss_pred HHHHHHHhcc----C---------CcccccCCCCC-cccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHHH
Q psy8733 534 VLLYQEIDNS----D---------KFYECPVQAGF-PLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILV 599 (621)
Q Consensus 534 ~~lY~~id~~----~---------~~~~~~v~~~~-~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~ 599 (621)
+.+.+.+++. + .|+...+.+.. .....|.+.+.++||+...|. .+.||++.=-.++.||++.++
T Consensus 331 ~~l~~~L~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~~--~~~iRl~~~~~~t~eei~~~~ 408 (420)
T 2pb2_A 331 QQFVQHLQAIDEQFDIFSDIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAG--ADVMRFAPSLVVEEADIHEGM 408 (420)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEETTEEEEEECGGGTTCHHHHHHHHHHTTEECEESS--TTEEEECCCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEecceEEEEEECCCchHHHHHHHHHHHHCCCEEEeCC--CCEEEEECCCCCCHHHHHHHH
Confidence 8888777652 2 11111111110 024568889999999876542 467999964479999999999
Q ss_pred HHHHHHHH
Q psy8733 600 KFMKEFRH 607 (621)
Q Consensus 600 ~~~~~~~~ 607 (621)
+.|+++.+
T Consensus 409 ~~l~~~l~ 416 (420)
T 2pb2_A 409 QRFAQAVG 416 (420)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988754
No 384
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=30.91 E-value=19 Score=36.73 Aligned_cols=146 Identities=13% Similarity=0.114 Sum_probs=92.3
Q ss_pred HHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHH
Q psy8733 452 IIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNS 529 (621)
Q Consensus 452 ~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~ 529 (621)
+..|.-|.+|++| ++.++.++++++... . .. .....|+|.+..+.+...|+ ....++.+.++.
T Consensus 224 ~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~----------~-~~-~~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~ 288 (391)
T 3h14_A 224 VINSFSKYFSMTGWRVGWMVVPEDQVRVVE----------R-IA-QNMFICAPHASQVAALAALD---CDAELQANLDVY 288 (391)
T ss_dssp EEEESSSTTCCTTSCCEEEECCGGGHHHHH----------H-HH-HHTTCCCCHHHHHHHHHHTT---CHHHHHHHHHHH
T ss_pred EEEechhccCCccceeEEEEeCHHHHHHHH----------H-HH-hhhccCCCHHHHHHHHHHhC---ChHHHHHHHHHH
Confidence 3345569999776 688888888876531 1 11 12334677888887776666 234577788888
Q ss_pred HHHHHHHHHHHhccC---------Cccccc-CCCCCcccHHHHHHHHH-ccCccccC--CCC---CCccceeeccCCCHH
Q psy8733 530 LQKSVLLYQEIDNSD---------KFYECP-VQAGFPLDELFLKEAKA-HNMIQLKG--HRL---VGGIRASIYNAITVD 593 (621)
Q Consensus 530 ~~ka~~lY~~id~~~---------~~~~~~-v~~~~~~~~~~~~~~~~-~~i~~~~g--~~~---~~~~r~~~~~a~~~~ 593 (621)
+++.+.+.+.+++.+ +||... +........+|.+.+.+ +||....| ++. .+.||++.-. +.|
T Consensus 289 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~--~~~ 366 (391)
T 3h14_A 289 KANRKLMLERLPKAGFTRIAPPDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYAR--ATA 366 (391)
T ss_dssp HHHHHHHHHHHHHHTCCCBCCCCBTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCS--CHH
T ss_pred HHHHHHHHHHHHHcCCCcccCCCeeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecC--CHH
Confidence 899999999988653 121111 11101123457777555 59986544 443 4569998433 889
Q ss_pred HHHHHHHHHHHHHHHcCCCCc
Q psy8733 594 EAVILVKFMKEFRHKHSRLSA 614 (621)
Q Consensus 594 ~~~~l~~~~~~~~~~~~~~~~ 614 (621)
+++.+++-|+++.++|...+.
T Consensus 367 ~i~~~l~~l~~~~~~~~~~~~ 387 (391)
T 3h14_A 367 DIEEGLDRLEAFMQARGEGHH 387 (391)
T ss_dssp HHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHhccccc
Confidence 999999999999988765543
No 385
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=30.87 E-value=35 Score=35.05 Aligned_cols=150 Identities=13% Similarity=0.111 Sum_probs=94.6
Q ss_pred HHHHhhc--ccccccCC-cEEeeec-HhHhhhcCCC--CCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChH
Q psy8733 450 GVIIAGA--QKNIGPAG-ITVVIVR-EDLLEYALPI--TPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLA 523 (621)
Q Consensus 450 ~~~~a~~--qk~~GpaG-l~v~iv~-~~~l~~~~~~--~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~ 523 (621)
|++..|. .|.+|+.| .+.++.+ ++++++..+. ......|.. .......+++.+...++...++|+.
T Consensus 203 di~~~S~~~sK~~~~~G~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~--~~~g~~~~~~~~~~a~~~~~l~~~~------ 274 (399)
T 2oga_A 203 SVAAFSFYPGKNLGCFGDGGAVVTGDPELAERLRMLRNYGSRQKYSH--ETKGTNSRLDEMQAAVLRIRLAHLD------ 274 (399)
T ss_dssp CEEEEECCTTSSSCCSSCCEEEEESCHHHHHHHHHHHBTTCSSTTCC--CSCCCBCCCCHHHHHHHHHHHHTHH------
T ss_pred CEEEEeCCCCccCCcCCceEEEEeCCHHHHHHHHHHHhcCccccccc--cccccCCCcCHHHHHHHHHHHHHHH------
Confidence 5666776 59999875 4556665 7776543210 000001111 0001112667788888777777765
Q ss_pred HHHHHHHHHHHHHHHHHhccCCcccccCCCC--------C----cccHHHHHHHHHccCccccCCCC-------------
Q psy8733 524 KMEQNSLQKSVLLYQEIDNSDKFYECPVQAG--------F----PLDELFLKEAKAHNMIQLKGHRL------------- 578 (621)
Q Consensus 524 ~~~~~~~~ka~~lY~~id~~~~~~~~~v~~~--------~----~~~~~~~~~~~~~~i~~~~g~~~------------- 578 (621)
.+.++.++.++.+.+.+++.+++ ..+..++ . .-..++.+.++++||....+|..
T Consensus 275 ~~~~~~~~~~~~l~~~L~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~ 353 (399)
T 2oga_A 275 SWNGRRSALAAEYLSGLAGLPGI-GLPVTAPDTDPVWHLFTVRTERRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAP 353 (399)
T ss_dssp HHHHHHHHHHHHHHHHTTTCTTC-BCCCCCTTEECCCSSEEEECSSHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHhccCCCc-cccCCCCCCcceeEEEEEECCCHHHHHHHHHHCCCceecCCCCccccchhhcccCC
Confidence 34556666788888999876543 2211110 0 12345888999999998776631
Q ss_pred ------------CCccceeeccCCCHHHHHHHHHHHHHHHHH
Q psy8733 579 ------------VGGIRASIYNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 579 ------------~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
.+.||++..+.++.||++.+++.|+++.++
T Consensus 354 ~~~~~p~~~~~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~ 395 (399)
T 2oga_A 354 PEGSLPRAESFARQVLSLPIGPHLERPQALRVIDAVREWAER 395 (399)
T ss_dssp CTTSCHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHHHS
T ss_pred CCCCChhHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 145999999999999999999999988754
No 386
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=30.83 E-value=18 Score=38.37 Aligned_cols=144 Identities=10% Similarity=0.074 Sum_probs=92.7
Q ss_pred HHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 450 GVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 450 ~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
.++..|..|.+| +| ++.++.+++++++... .....++ ++|.++.+++...|+...-...++.+.+
T Consensus 281 vi~~~S~SK~~~-~GlriG~v~~~~~l~~~l~~-----------~~~~~~~-~~~~~~q~a~~~~L~~~~~~~~~~~~~~ 347 (448)
T 3aow_A 281 VIYLGTFSKILA-PGFRIGWMVGDPGIIRKMEI-----------AKQSTDL-CTNVFGQVVAWRYVDGGYLEKHIPEIRK 347 (448)
T ss_dssp EEEEEESTTTTC-GGGCCEEEEECHHHHHHHHH-----------HHHHHHS-SCCHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred EEEEccchhhcc-ccccEEEEEeCHHHHHHHHH-----------HHHHhcC-CCCHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 345667789999 78 7999999999876321 1111122 4577777776666652100123667777
Q ss_pred HHHHHHHHHHHHHhcc-C-CcccccCCC-C--------Cc-ccHHHHHHHHHccCccccC--CC----CCCccceeeccC
Q psy8733 528 NSLQKSVLLYQEIDNS-D-KFYECPVQA-G--------FP-LDELFLKEAKAHNMIQLKG--HR----LVGGIRASIYNA 589 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~-~-~~~~~~v~~-~--------~~-~~~~~~~~~~~~~i~~~~g--~~----~~~~~r~~~~~a 589 (621)
+.+++.+.+.+.+++. + ++ ...... + .. -..+|.+.+.++|+....| +. ..+.||++ |..
T Consensus 348 ~~~~~~~~l~~~L~~~~~~g~-~~~~p~~g~~~~v~~~~~~~~~~l~~~l~~~gV~v~pg~~f~~~~~~~~~iRls-~~~ 425 (448)
T 3aow_A 348 FYKPRRDAMLEALEEFMPEGV-KWTKPEGGMFIWVTLPDGIDSKKMLERAIKKGVAYVPGEAFYAHRDVKNTMRLN-FTY 425 (448)
T ss_dssp HHHHHHHHHHHHHHHHCCTTC-EECCCSBSSEEEEECSTTCCHHHHHHHHHHTTEECEEGGGGSTTCCCCSEEEEE-CSS
T ss_pred HHHHHHHHHHHHHHHhCCCCe-EEeCCCccEEEEEEcCCCCCHHHHHHHHHHCCcEEEcchhhcCCCCCCCEEEEE-eCC
Confidence 7788999999999863 3 22 110000 0 11 2356888888999986655 32 24569999 666
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy8733 590 ITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 590 ~~~~~~~~l~~~~~~~~~~ 608 (621)
.+.|+++..++-|+++.++
T Consensus 426 ~~~e~i~~~~~~L~~~l~~ 444 (448)
T 3aow_A 426 VDEDKIMEGIKRLAETIKE 444 (448)
T ss_dssp SCTHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 6899999998888877654
No 387
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=30.80 E-value=1.2e+02 Score=30.66 Aligned_cols=130 Identities=9% Similarity=0.125 Sum_probs=90.4
Q ss_pred hccccccc-CCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q psy8733 455 GAQKNIGP-AGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKS 533 (621)
Q Consensus 455 ~~qk~~Gp-aGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~~~ka 533 (621)
+..|.+|+ -+++.+++++++++...+ .. .....++|.+..+.+...|+.+.+ +.+.++.++..
T Consensus 251 s~sK~~~~g~~~G~~~~~~~~~~~l~~-----------~~-~~~~~~~~~~~~~a~~~al~~~~~----~~~~~~~~~~~ 314 (395)
T 1vef_A 251 TLAKALGGGVPLGVAVMREEVARSMPK-----------GG-HGTTFGGNPLAMAAGVAAIRYLER----TRLWERAAELG 314 (395)
T ss_dssp EECGGGGTTSSCEEEEEEHHHHHTSCT-----------TS-SCCSSTTCHHHHHHHHHHHHHHHH----HTTHHHHHHHH
T ss_pred EEcccccCCCceEEEEehHHHHhhhcc-----------CC-cCCCcCCCHHHHHHHHHHHHHHHh----CCHHHHHHHHH
Confidence 55888884 468999999998765322 01 122236788889988889998875 24567777888
Q ss_pred HHHHHHHhccCC-----------cccccCCCCCcccHHHHHHHH-HccCccccCCCCCCccceeeccCCCHHHHHHHHHH
Q psy8733 534 VLLYQEIDNSDK-----------FYECPVQAGFPLDELFLKEAK-AHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKF 601 (621)
Q Consensus 534 ~~lY~~id~~~~-----------~~~~~v~~~~~~~~~~~~~~~-~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~~~ 601 (621)
+.+++.+++... |+...+. .-...|.+.+. ++||....| ..+.||++.-..++.|+++.+++.
T Consensus 315 ~~l~~~l~~~~~~~~~~~~~~g~~~~~~~~---~~~~~l~~~l~~~~gi~v~~~--~~~~iRi~~~~~~~~~~i~~~~~~ 389 (395)
T 1vef_A 315 PWFMEKLRAIPSPKIREVRGMGLMVGLELK---EKAAPYIARLEKEHRVLALQA--GPTVIRFLPPLVIEKEDLERVVEA 389 (395)
T ss_dssp HHHHHHHHTSCCTTEEEEEEETTEEEEEES---SCSHHHHHHHHHHHCEECEES--STTEEEECCCTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCceEEEEEEEEEEEEEEc---ChHHHHHHHHHHHCCeEEecC--CCCEEEEeCCCCCCHHHHHHHHHH
Confidence 888888876431 1111111 01466888888 899986654 256799997668999999999999
Q ss_pred HHHH
Q psy8733 602 MKEF 605 (621)
Q Consensus 602 ~~~~ 605 (621)
|+++
T Consensus 390 l~~~ 393 (395)
T 1vef_A 390 VRAV 393 (395)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
No 388
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=30.75 E-value=1e+02 Score=31.97 Aligned_cols=143 Identities=7% Similarity=-0.039 Sum_probs=90.4
Q ss_pred hcccccccCC---cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHHHH
Q psy8733 455 GAQKNIGPAG---ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQ 531 (621)
Q Consensus 455 ~~qk~~GpaG---l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~~~ 531 (621)
+..|.+|+ | ++.+++++++++...+.... -.+.. ....++|+ +|.++...+..+|+.+.+. .+.++.++
T Consensus 285 s~sK~l~~-G~~~~G~~~~~~~~~~~l~~~~~~-~~~~~-~~~~~t~~-~~~~~~aa~~aal~~~~~~----~~~~~~~~ 356 (449)
T 3a8u_X 285 CIAKQVTN-GAIPMGAVIASTEIYQTFMNQPTP-EYAVE-FPHGYTYS-AHPVACAAGLAALCLLQKE----NLVQSVAE 356 (449)
T ss_dssp EECGGGGT-TSSCCEEEEEEHHHHHHHHTCSSC-TTSCS-SCCCCTTT-TCHHHHHHHHHHHHHHHHT----THHHHHHH
T ss_pred EEcccccC-CCCceEEEEECHHHHHHhhccCcc-ccccc-ccccCCCc-ccHHHHHHHHHHHHHHHhc----CHHHHHHH
Confidence 55688986 7 89999999987653221000 00000 11234444 5667788888899988763 35566777
Q ss_pred HHHHHHHHHhccCC--cc----------cccCCCCCc-c---cHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHH
Q psy8733 532 KSVLLYQEIDNSDK--FY----------ECPVQAGFP-L---DELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEA 595 (621)
Q Consensus 532 ka~~lY~~id~~~~--~~----------~~~v~~~~~-~---~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~ 595 (621)
..+.+.+.+++-.. .+ ...+.+... . ...|.+.+.++||....| + +.||++.--.++.|++
T Consensus 357 ~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-g--~~iRis~~~~~t~~~i 433 (449)
T 3a8u_X 357 VAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALWKAGFYVRFG-G--DTLQFGPTFNSKPQDL 433 (449)
T ss_dssp HHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHHHHTEECEEE-T--TEEEECCCTTCCHHHH
T ss_pred HHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHHHCCcEEecC-C--CEEEEECCCcCCHHHH
Confidence 77888888865221 11 111111101 1 125888888999987665 2 7799985448999999
Q ss_pred HHHHHHHHHHHHH
Q psy8733 596 VILVKFMKEFRHK 608 (621)
Q Consensus 596 ~~l~~~~~~~~~~ 608 (621)
+.+++.|++..++
T Consensus 434 ~~~l~~l~~~l~~ 446 (449)
T 3a8u_X 434 DRLFDAVGEVLNK 446 (449)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999887654
No 389
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=29.67 E-value=31 Score=34.66 Aligned_cols=141 Identities=11% Similarity=-0.001 Sum_probs=90.1
Q ss_pred HHHhhcccccccCC--cEEeee-cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIV-REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv-~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
++..|..|.+|++| ++.+++ ++++++.... . ...+..++|.++.+.+...|+... ..++.+.+
T Consensus 216 i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~ 281 (377)
T 3fdb_A 216 ITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQ-----------L-SPVIKDGASTLGLIAAEAAYRYGT--DFLNQEVA 281 (377)
T ss_dssp EEEECSTTTTTCGGGCCEEEECCSHHHHHHHHH-----------S-CHHHHCCCCHHHHHHHHHHHHHCH--HHHHHHHH
T ss_pred EEEEeChHhccCcchhheEEEeCCHHHHHHHHH-----------H-HHhhcCCCCHHHHHHHHHHHhccH--HHHHHHHH
Confidence 55678889999777 565565 6777665321 1 112235788888888877777432 24677788
Q ss_pred HHHHHHHHHHHHHhc-cCCc---------cc-ccCCCCCcccHHHHHHHH-HccCccccCC--CC--CCccceeeccCCC
Q psy8733 528 NSLQKSVLLYQEIDN-SDKF---------YE-CPVQAGFPLDELFLKEAK-AHNMIQLKGH--RL--VGGIRASIYNAIT 591 (621)
Q Consensus 528 ~~~~ka~~lY~~id~-~~~~---------~~-~~v~~~~~~~~~~~~~~~-~~~i~~~~g~--~~--~~~~r~~~~~a~~ 591 (621)
+.+++.+.+.+.+.+ .+++ +. ..+. ....+.++.+.+. ++||....|. +. .+.+|++.- .+
T Consensus 282 ~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~--~~ 358 (377)
T 3fdb_A 282 YLKNNHDFLLHEIPKRIPGAKITPMQATYLMWIDFR-DTTIEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFA--TS 358 (377)
T ss_dssp HHHHHHHHHHHHHHHHSTTCEECCCSBCSEEEEECT-TSCCCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC--SC
T ss_pred HHHHHHHHHHHHHHhhCCCceEecCCeeEEEEEECc-ccCCCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeC--CC
Confidence 888999999999987 3332 21 1111 1012334555554 4599865553 33 577999843 48
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy8733 592 VDEAVILVKFMKEFRHK 608 (621)
Q Consensus 592 ~~~~~~l~~~~~~~~~~ 608 (621)
.|+++..++-|+++.++
T Consensus 359 ~e~i~~~l~~l~~~l~~ 375 (377)
T 3fdb_A 359 REVLEEAIDRMAKAVSH 375 (377)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999998888877654
No 390
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=29.51 E-value=9.1 Score=39.54 Aligned_cols=147 Identities=19% Similarity=0.206 Sum_probs=95.0
Q ss_pred HHHhhcccccccCC--cEEeeecHh--HhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVRED--LLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~--~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
++..|..|.+|.+| ++.++.++. +++.... . .+.. .+...++|.+..+.+...|+.+. ..+++.+.
T Consensus 246 i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~~~~~---~---~~~~---~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~ 315 (416)
T 1bw0_A 246 VILGGTAKNLVVPGWRLGWLLYVDPHGNGPSFLE---G---LKRV---GMLVCGPCTVVQAALGEALLNTP-QEHLDQIV 315 (416)
T ss_dssp EEEEESTTTTSCGGGCCEEEEEECTTCSCHHHHH---H---HHHH---HHHHTCSCHHHHHHHHHHHHSSC-HHHHHHHH
T ss_pred EEEecchhhCCCCCceEEEEEeeCchhhHHHHHH---H---HHHH---hccccCCCcHHHHHHHHHHhccc-HHHHHHHH
Confidence 34567799998777 677887764 4332100 0 0110 11234788888888887777432 34577888
Q ss_pred HHHHHHHHHHHHHHhccCCcccccCCC-CC--------------cccHHHHHHH-HHccCccccC--CCCCCccceeecc
Q psy8733 527 QNSLQKSVLLYQEIDNSDKFYECPVQA-GF--------------PLDELFLKEA-KAHNMIQLKG--HRLVGGIRASIYN 588 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~~~~~~~v~~-~~--------------~~~~~~~~~~-~~~~i~~~~g--~~~~~~~r~~~~~ 588 (621)
++.+++.+.+++.+.+.+++ ...... +. .-...|.+.+ +++||....| ++..+.||++.
T Consensus 316 ~~~~~~~~~l~~~L~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~-- 392 (416)
T 1bw0_A 316 AKIEESAMYLYNHIGECIGL-APTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTT-- 392 (416)
T ss_dssp HHHHHHHHHHHHHHTTSTTE-EECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEEC--
T ss_pred HHHHHHHHHHHHHHHhCCCC-cccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEe--
Confidence 88899999999999876442 111000 00 1134576766 6899986554 44467799998
Q ss_pred CCCHHHHHHHHHHHHHHHHHcC
Q psy8733 589 AITVDEAVILVKFMKEFRHKHS 610 (621)
Q Consensus 589 a~~~~~~~~l~~~~~~~~~~~~ 610 (621)
+++.|+++..++-|+++.+++.
T Consensus 393 ~~~~e~l~~~l~~l~~~l~~~~ 414 (416)
T 1bw0_A 393 TRPVEVYREAVERIKAFCQRHA 414 (416)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHB
T ss_pred cCCHHHHHHHHHHHHHHHHHhh
Confidence 6899999999988888877654
No 391
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=29.33 E-value=48 Score=34.12 Aligned_cols=142 Identities=12% Similarity=0.091 Sum_probs=91.6
Q ss_pred HHhhcccccccCCc--EEeee-cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHh--------cC
Q psy8733 452 IIAGAQKNIGPAGI--TVVIV-REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKR--------QG 520 (621)
Q Consensus 452 ~~a~~qk~~GpaGl--~v~iv-~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~--------~g 520 (621)
+..|.=|.+|++|+ +.+++ ++++++.-. . ... .+.-++|.+..+++...|+.-.+ .-
T Consensus 211 ~~~S~SK~~g~~GlRiG~~~~~~~~l~~~l~----------~-~~~-~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 278 (391)
T 3bwn_A 211 MLFTFSKITGHAGSRIGWALVKDKEVAKKMV----------E-YII-VNSIGVSKESQVRTAKILNVLKETCKSESESEN 278 (391)
T ss_dssp EEEEHHHHHSCGGGCEEEEEECCHHHHHHHH----------H-HHH-HHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTS
T ss_pred EEEechhhcCCCccceEEEEecCHHHHHHHH----------H-Hhc-ccccCCCHHHHHHHHHHHhCcchhccccccHHH
Confidence 34455588999997 88888 788876521 1 111 12245677877777777764321 23
Q ss_pred ChHHHHHHHHHHHHHHHHHHhccCCccccc-CC------------C-C----Ccc--cHHHHHHHHHccCccccC--CCC
Q psy8733 521 GLAKMEQNSLQKSVLLYQEIDNSDKFYECP-VQ------------A-G----FPL--DELFLKEAKAHNMIQLKG--HRL 578 (621)
Q Consensus 521 g~~~~~~~~~~ka~~lY~~id~~~~~~~~~-v~------------~-~----~~~--~~~~~~~~~~~~i~~~~g--~~~ 578 (621)
.++.+.+.-+++.+.+++.|.+.+++ ... .+ + + .++ .+.+.+.++++||....| ++.
T Consensus 279 ~~~~~~~~~~~~~~~l~~~L~~~~~~-~~~~p~~~~~~f~~~~~~~~g~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~ 357 (391)
T 3bwn_A 279 FFKYGREMMKNRWEKLREVVKESDAF-TLPKYPEAFCNYFGKSLESYPAFAWLGTKEETDLVSELRRHKVMSRAGERCGS 357 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCSSE-ECCCCCCEEETTTTEEECCCCSEEEEEESSSCCHHHHHHHTTEECEEGGGGTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCc-ccccCCccccccccccCCCcceEEEecCCcHHHHHHHHHHCCEEEccCCCCCC
Confidence 47888899999999999999886432 110 00 0 0 001 234567788899986555 444
Q ss_pred -CCccceeeccCCCHHHHHHHHHHHHHHHHH
Q psy8733 579 -VGGIRASIYNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 579 -~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
.+.||++.=. +.|+++++++-|+++.++
T Consensus 358 ~~~~iRis~~~--~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 358 DKKHVRVSMLS--REDVFNVFLERLANMKLI 386 (391)
T ss_dssp CTTEEEEESCS--CHHHHHHHHHHHHSCC--
T ss_pred CCCEEEEEecC--CHHHHHHHHHHHHHHHHh
Confidence 5679999863 899999999988876544
No 392
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=29.33 E-value=1.4e+02 Score=31.16 Aligned_cols=135 Identities=13% Similarity=0.121 Sum_probs=89.2
Q ss_pred hcccccccCC---cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHHHH
Q psy8733 455 GAQKNIGPAG---ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQ 531 (621)
Q Consensus 455 ~~qk~~GpaG---l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~~~ 531 (621)
+.-|.+| +| ++.++.++++++...+ ....++| ++|.++....-.+|+.+.+. .+.++.++
T Consensus 278 t~sK~l~-~G~~~~G~v~~~~~~~~~l~~-----------~~~~~t~-~~~~~~~aaa~aal~~~~~~----~~~~~~~~ 340 (433)
T 1z7d_A 278 LLGKALS-GGHYPISAVLANDDIMLVIKP-----------GEHGSTY-GGNPLAASICVEALNVLINE----KLCENAEK 340 (433)
T ss_dssp EECGGGG-TTSSCCEEEEECHHHHTTCCT-----------TCCCCTT-TTCHHHHHHHHHHHHHHHHT----THHHHHHH
T ss_pred EECcccc-CCCCCeEEEEECHHHHhhhcc-----------ccccccC-CCCHHHHHHHHHHHHHHHhc----cHHHHHHH
Confidence 4458888 57 8999999998865322 1223455 45667788888889888753 35556667
Q ss_pred HHHHHHHHHhcc----C---------CcccccCCCCCcccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHH
Q psy8733 532 KSVLLYQEIDNS----D---------KFYECPVQAGFPLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVIL 598 (621)
Q Consensus 532 ka~~lY~~id~~----~---------~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l 598 (621)
+.+.+.+.+++- + .|+...+.+.......|.+.+.++|+....+. .+.||++.=-.++.||++.+
T Consensus 341 ~~~~l~~~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~iRi~~~~~~t~e~i~~~ 418 (433)
T 1z7d_A 341 LGGPFLENLKRELKDSKIVRDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDVH--DKTIRLTPPLCITKEQLDEC 418 (433)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEEEETTEEEEEECTTTCCHHHHHHHHHHTTEECCEET--TTEEEECCCTTCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEeeeeEEEEEEccChhHHHHHHHHHHHCCeEEecCC--CCEEEEECCcCCCHHHHHHH
Confidence 777777777642 1 11111111110124568889999999876542 45699976557999999999
Q ss_pred HHHHHHHHHH
Q psy8733 599 VKFMKEFRHK 608 (621)
Q Consensus 599 ~~~~~~~~~~ 608 (621)
++-|++..++
T Consensus 419 l~~l~~~l~~ 428 (433)
T 1z7d_A 419 TEIIVKTVKF 428 (433)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999887554
No 393
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=29.32 E-value=33 Score=37.38 Aligned_cols=156 Identities=12% Similarity=0.110 Sum_probs=96.9
Q ss_pred HHHHHhhccccc-ccCCcEEeeecHhHhhhcC-CCCCceeeeeecc---cCCCccCCCchhHHHHHHHHHHHHHhcCChH
Q psy8733 449 FGVIIAGAQKNI-GPAGITVVIVREDLLEYAL-PITPTVFHFKINA---DNNSVYNTPPTFVVHVIQRVFAWIKRQGGLA 523 (621)
Q Consensus 449 ~~~~~a~~qk~~-GpaGl~v~iv~~~~l~~~~-~~~p~~~~y~~~~---~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~ 523 (621)
.|++..+.+|.| ||.| ++++.+++++.... ...+.+.++.... -...+..+|+...|..+...++.+.+.+ .+
T Consensus 257 aDiv~~S~hK~l~Gp~G-G~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~-~~ 334 (490)
T 2a7v_A 257 ADIVTTTTHKTLRGARS-GLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPM-FR 334 (490)
T ss_dssp CSEEEEESSGGGCSCSC-EEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHH-HH
T ss_pred CCEEEECCcccCccccc-hheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhh-HH
Confidence 578889999999 5988 88888876431100 0001111111111 1223456788888887777777765433 36
Q ss_pred HHHHHHHHHHHHHHHHHhccCCccc---------ccCC-CCCcc-cHHHHHHHHHccCccccC----CCC---CCcccee
Q psy8733 524 KMEQNSLQKSVLLYQEIDNSDKFYE---------CPVQ-AGFPL-DELFLKEAKAHNMIQLKG----HRL---VGGIRAS 585 (621)
Q Consensus 524 ~~~~~~~~ka~~lY~~id~~~~~~~---------~~v~-~~~~~-~~~~~~~~~~~~i~~~~g----~~~---~~~~r~~ 585 (621)
+..++..+.++.|.+.|.+. +|-. .+|. ....+ .+.+.+.++++||..-++ .++ .++||++
T Consensus 335 ~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig 413 (490)
T 2a7v_A 335 EYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTCPGDRSAITPGGLRLG 413 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCccCCCCCCCCCCceEec
Confidence 77778888899999999764 3211 1111 01112 245778888999997653 222 5679996
Q ss_pred e----ccCCCHHHHHHHHHHHHHHHH
Q psy8733 586 I----YNAITVDEAVILVKFMKEFRH 607 (621)
Q Consensus 586 ~----~~a~~~~~~~~l~~~~~~~~~ 607 (621)
. --.++.+|++.++++|.+...
T Consensus 414 ~~a~t~~g~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 414 APALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp SHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHH
Confidence 5 224789999999999987764
No 394
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=28.68 E-value=57 Score=34.57 Aligned_cols=157 Identities=14% Similarity=0.080 Sum_probs=92.4
Q ss_pred HHHHHhhcccccc-cCCcEEeeecHhH-hhhcCCCCCceeeeeec----cc---CCCccCCCchhHHHHHHHHHHHHHhc
Q psy8733 449 FGVIIAGAQKNIG-PAGITVVIVREDL-LEYALPITPTVFHFKIN----AD---NNSVYNTPPTFVVHVIQRVFAWIKRQ 519 (621)
Q Consensus 449 ~~~~~a~~qk~~G-paGl~v~iv~~~~-l~~~~~~~p~~~~y~~~----~~---~~s~~nTP~~~~iy~~~~vl~~~~~~ 519 (621)
.|.+-.+.+|.++ |-|.+++++++.. +.+.....|..+..... .. ..++..+.+ +...-+...++.+..
T Consensus 294 adsi~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr-~~~~~~~~al~~~g~- 371 (486)
T 1js3_A 294 ADSFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRR-FRSLKMWFVFRMYGV- 371 (486)
T ss_dssp CSEEEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCC-CTHHHHHHHHHHHHH-
T ss_pred cCeeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCc-hhHHHHHHHHHHHhH-
Confidence 4666678899998 7899999998653 34433333333311110 00 011111111 222223333444432
Q ss_pred CChHHHHHHHHHHHHHHHHHHhccCCcccccCCC----------CC-cccHHHHHHHHHccCccccCC--CCCCccceee
Q psy8733 520 GGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQA----------GF-PLDELFLKEAKAHNMIQLKGH--RLVGGIRASI 586 (621)
Q Consensus 520 gg~~~~~~~~~~ka~~lY~~id~~~~~~~~~v~~----------~~-~~~~~~~~~~~~~~i~~~~g~--~~~~~~r~~~ 586 (621)
.|++.+-++..+.++.+++.|.+.++|- ...++ .. ..+..+.+.+.++|++...+. +..+.+|++.
T Consensus 372 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~lRi~~ 450 (486)
T 1js3_A 372 KGLQAYIRKHVQLSHEFEAFVLQDPRFE-VCAEVTLGLVCFRLKGSDGLNEALLERINSARKIHLVPCRLRGQFVLRFAI 450 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCTTEE-ECSCCCSSEEEEEESSCHHHHHHHHHHHHHHTSCBCEEEEETTEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeE-EeCCCceeEEEEEecChHHHHHHHHHHHHhcCCEEEEEEEECCEEEEEEEe
Confidence 3588888899999999999999876542 21111 11 134668888888897744332 2245699995
Q ss_pred -ccCCCHHHHHHHHHHHHHHHHH
Q psy8733 587 -YNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 587 -~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
-|..+.|+++.+++.|+++.++
T Consensus 451 ~~~~~t~~di~~~~~~l~~~~~~ 473 (486)
T 1js3_A 451 CSRKVESGHVRLAWEHIRGLAAE 473 (486)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH
Confidence 7778999999999999888754
No 395
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=27.32 E-value=32 Score=36.22 Aligned_cols=80 Identities=10% Similarity=0.093 Sum_probs=54.1
Q ss_pred HHHHHhhcccccccCC---cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHH
Q psy8733 449 FGVIIAGAQKNIGPAG---ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKM 525 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaG---l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~ 525 (621)
.|++..|.-|.+|+.| +++++.+++.+.... +... ...-.+++.+..|++-+.++|+.. .
T Consensus 218 ~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l---------~~~~--~~~g~~~~~~~a~~~~~~l~~l~~------r 280 (414)
T 3ndn_A 218 VDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPV---------QKLM--RHTGPAMSAFNAWVLLKGLETLAI------R 280 (414)
T ss_dssp CSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHH---------HHHH--HHHCCCCCHHHHHHHHHHGGGHHH------H
T ss_pred CCeEeccCCccccCCCCceEEEEEECHHHHHHHH---------HHHH--HHcCCCCCHHHHHHHHHHHHHHHH------H
Confidence 4677888999999988 799999998875321 1001 111235677777877777777652 2
Q ss_pred HHHHHHHHHHHHHHHhccCC
Q psy8733 526 EQNSLQKSVLLYQEIDNSDK 545 (621)
Q Consensus 526 ~~~~~~ka~~lY~~id~~~~ 545 (621)
-++..+.++.+.+++++.+.
T Consensus 281 ~~~~~~~a~~l~~~L~~~p~ 300 (414)
T 3ndn_A 281 VQHSNASAQRIAEFLNGHPS 300 (414)
T ss_dssp HHHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHHHhcCCC
Confidence 33456777889999988763
No 396
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=27.26 E-value=1.5e+02 Score=30.86 Aligned_cols=134 Identities=13% Similarity=0.118 Sum_probs=90.5
Q ss_pred hcccccccCC---cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHHHH
Q psy8733 455 GAQKNIGPAG---ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQ 531 (621)
Q Consensus 455 ~~qk~~GpaG---l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~~~ 531 (621)
+..|.+|+ | ++.++.++++++...+ ....++|+ +|.++....-.+|+.+.+. .+.++.++
T Consensus 289 t~sK~l~~-G~~~~G~v~~~~~~~~~l~~-----------~~~~~t~~-~~~~~~aaa~aal~~~~~~----~~~~~~~~ 351 (439)
T 2oat_A 289 LLGKALSG-GLYPVSAVLCDDDIMLTIKP-----------GEHGSTYG-GNPLGCRVAIAALEVLEEE----NLAENADK 351 (439)
T ss_dssp EECGGGGT-TSSCCEEEEECHHHHTTSCT-----------TSSCCSST-TCHHHHHHHHHHHHHHHHT----THHHHHHH
T ss_pred EecccccC-CCCCeEEEEECHHHHhccCC-----------CCcccCCC-cCHHHHHHHHHHHHHHhhh----hHHHHHHH
Confidence 55688885 7 9999999998865322 12345564 5567777888888888753 35667778
Q ss_pred HHHHHHHHHhccC-----------CcccccCCCCC-cccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHHH
Q psy8733 532 KSVLLYQEIDNSD-----------KFYECPVQAGF-PLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILV 599 (621)
Q Consensus 532 ka~~lY~~id~~~-----------~~~~~~v~~~~-~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~ 599 (621)
+.+.+.+.+++-. .|+...+.+.. .....|.+.+.++|+....+. .+.||++.=-+++.||++.++
T Consensus 352 ~~~~l~~~L~~l~~~~~~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~~--~~~iRi~~~~~~t~e~i~~~l 429 (439)
T 2oat_A 352 LGIILRNELMKLPSDVVTAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPTH--GDIIRFAPPLVIKEDELRESI 429 (439)
T ss_dssp HHHHHHHHHTTSCTTTEEEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECCBSS--SSEEEECCCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcEEEEeeeeEEEEEEecCccHHHHHHHHHHHHCCeEEecCC--CCEEEEECccCCCHHHHHHHH
Confidence 8888888887641 01111111110 123568889999999876532 466999864479999999999
Q ss_pred HHHHHHHH
Q psy8733 600 KFMKEFRH 607 (621)
Q Consensus 600 ~~~~~~~~ 607 (621)
+-|++..+
T Consensus 430 ~~l~~~l~ 437 (439)
T 2oat_A 430 EIINKTIL 437 (439)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99987654
No 397
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=26.94 E-value=28 Score=35.82 Aligned_cols=142 Identities=11% Similarity=0.087 Sum_probs=96.1
Q ss_pred HHhhcccccccCC--cEEeee---cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHH-------HHHhc
Q psy8733 452 IIAGAQKNIGPAG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFA-------WIKRQ 519 (621)
Q Consensus 452 ~~a~~qk~~GpaG--l~v~iv---~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~-------~~~~~ 519 (621)
+..|.-|.+|.+| ++.++. ++++++.... +.. ....+.+.++|.++...+...|+ |.+
T Consensus 256 ~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~-- 325 (418)
T 3rq1_A 256 VCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFE-------VNK-STSRATWSNICRPAMRTMANIVADPAKFKEYEA-- 325 (418)
T ss_dssp EEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHH-------HHH-HHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHH--
T ss_pred EEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHH-------HHH-HHHhhccCCCchHHHHHHHHHhCCHHHHHHHHH--
Confidence 3457789999777 577777 8888766321 111 11123456788888888877774 232
Q ss_pred CChHHHHHHHHHHHHHHHHHHhccC--------CcccccCCCCCcccHHHHHHHHHccCccccCCCCCCccceeeccCCC
Q psy8733 520 GGLAKMEQNSLQKSVLLYQEIDNSD--------KFYECPVQAGFPLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAIT 591 (621)
Q Consensus 520 gg~~~~~~~~~~ka~~lY~~id~~~--------~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~ 591 (621)
.+..+.++-+++.+.+++.+++.. +||... + .....+|.+.++++||....| .+.||++ |-.++
T Consensus 326 -~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~-~--~~~~~~~~~~l~~~gi~v~~g---~~~iRis-~~~~~ 397 (418)
T 3rq1_A 326 -ERNCYYQLIRDRADIFKQEAAQVGLPMLPYRGGFFITI-P--TDSANAICEELKKEHIYVIAL---ANGIRIA-ACGIP 397 (418)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCSSSEEEE-E--CTTHHHHHHHHHHTTEECEEC---SSEEEEE-GGGSC
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCceEEEEc-C--CCCHHHHHHHHHhCCEEEecC---CCCeEEE-EecCC
Confidence 255677788888899999887641 222211 0 012456888899999997766 3569999 55789
Q ss_pred HHHHHHHHHHHHHHHHHcCC
Q psy8733 592 VDEAVILVKFMKEFRHKHSR 611 (621)
Q Consensus 592 ~~~~~~l~~~~~~~~~~~~~ 611 (621)
.|+++.+++-|+++.++..+
T Consensus 398 ~~~i~~~~~~l~~~l~~~~~ 417 (418)
T 3rq1_A 398 KCQMTGLAEKIYNAMKSLGK 417 (418)
T ss_dssp HHHHTTHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99999999999998877653
No 398
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=25.57 E-value=14 Score=37.71 Aligned_cols=145 Identities=12% Similarity=0.104 Sum_probs=91.1
Q ss_pred HHHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHH
Q psy8733 449 FGVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKME 526 (621)
Q Consensus 449 ~~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~ 526 (621)
.+++..|..|.+|++| ++.++.++++++.... .....++ ++|.+..+++...|+. ..+.++.+.
T Consensus 244 ~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~-----------~~~~~~~-~~~~~~~~a~~~~l~~--~~~~~~~~~ 309 (407)
T 3nra_A 244 NVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEK-----------LQAIVSL-RAAGYSQAVLRGWFDE--APGWMEDRI 309 (407)
T ss_dssp GEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHH-----------HHHHHTS-SSCHHHHGGGGGTTCC--CTTHHHHHH
T ss_pred cEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHH-----------HHhhhcc-CCChHHHHHHHHHHhc--cchHHHHHH
Confidence 3466778889999666 6888889988765321 1111222 3455666665544431 123466777
Q ss_pred HHHHHHHHHHHHHHhccCCcccccCCC--------CC-c-ccHHHHHHHH-HccCccccC--CC--CCCccceeeccCCC
Q psy8733 527 QNSLQKSVLLYQEIDNSDKFYECPVQA--------GF-P-LDELFLKEAK-AHNMIQLKG--HR--LVGGIRASIYNAIT 591 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~~~~~~~v~~--------~~-~-~~~~~~~~~~-~~~i~~~~g--~~--~~~~~r~~~~~a~~ 591 (621)
++.+++.+.+++.+++.+++-...... .. . ....+.+.+. ++||....| ++ ..+.||++. . .+
T Consensus 310 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~-~-~~ 387 (407)
T 3nra_A 310 ARHQAIRDELLHVLRGCEGVFARTPQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNF-S-QD 387 (407)
T ss_dssp HHHHHHHHHHHHHHHTSTTCBCCCCSBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEEC-C-SC
T ss_pred HHHHHHHHHHHHHHhcCCCceeccCCeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEe-C-CC
Confidence 788888999999998765432111111 11 1 2345777774 569986554 33 256799995 3 49
Q ss_pred HHHHHHHHHHHHHHHHHc
Q psy8733 592 VDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 592 ~~~~~~l~~~~~~~~~~~ 609 (621)
.|+++.+++-|+++.++.
T Consensus 388 ~~~i~~~~~~l~~~~~~~ 405 (407)
T 3nra_A 388 HEAAVAAARRIVTLVERY 405 (407)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999998877654
No 399
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=25.56 E-value=25 Score=36.67 Aligned_cols=151 Identities=15% Similarity=0.035 Sum_probs=94.8
Q ss_pred HHHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHH
Q psy8733 450 GVIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQ 527 (621)
Q Consensus 450 ~~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~ 527 (621)
+++..|.-|.+|++| ++.++.++++++... .+..-.+. .....+++++|.++...+-..|+.... -.++.+.+
T Consensus 274 ~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~ 348 (449)
T 3qgu_A 274 AIETCSFSKYAGFTGVRLGWTVVPKALKYANG--EPVHADWN--RVMTTCFNGASNIVQAGGLACLQPEGL-KEMNAMIK 348 (449)
T ss_dssp EEEEEECSGGGTCTTCCCEEEECCTTCBCTTS--CBHHHHHH--HHHHHSCCCCCHHHHHHHHHHTSHHHH-HHHHHHHH
T ss_pred EEEEecchhhcCCccceeEEEecCHHHHhhhh--hhHHHHHH--HHhhcccCCCCHHHHHHHHHHHhhcCH-HHHHHHHH
Confidence 456778889999777 788888888775300 00000011 112345678888888887777664211 13667888
Q ss_pred HHHHHHHHHHHHHhccC--------CcccccCCCCCcccHHHHHHHHH-ccCccccC--CCC--CCccceeeccCCCHHH
Q psy8733 528 NSLQKSVLLYQEIDNSD--------KFYECPVQAGFPLDELFLKEAKA-HNMIQLKG--HRL--VGGIRASIYNAITVDE 594 (621)
Q Consensus 528 ~~~~ka~~lY~~id~~~--------~~~~~~v~~~~~~~~~~~~~~~~-~~i~~~~g--~~~--~~~~r~~~~~a~~~~~ 594 (621)
+.+++.+.+.+.+.+.. ++|...--+ .....+|.+.+.+ +||....| ++. .+.||++.. .+.|+
T Consensus 349 ~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~--~~~e~ 425 (449)
T 3qgu_A 349 FYKENAQILKTTFTEMGFSVYGGDDAPYIWVGFP-GKPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAF--GSREN 425 (449)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEESSSSSEEEEECT-TSCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC--SCHHH
T ss_pred HHHHHHHHHHHHHHHCCCeeeCCCCeeEEEEECC-CCCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEec--CCHHH
Confidence 88899999999998642 222111000 1123456666555 59986554 333 577999954 49999
Q ss_pred HHHHHHHHHHHHHH
Q psy8733 595 AVILVKFMKEFRHK 608 (621)
Q Consensus 595 ~~~l~~~~~~~~~~ 608 (621)
++.+++-|+++.++
T Consensus 426 i~~~l~~l~~~~~~ 439 (449)
T 3qgu_A 426 ILEAVRRFKEAYGK 439 (449)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHh
Confidence 99999998887754
No 400
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=24.92 E-value=30 Score=35.17 Aligned_cols=137 Identities=13% Similarity=0.049 Sum_probs=89.6
Q ss_pred HHHhhcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
++..|..|.+|.+| ++.++.++++++.... +. .....|+|.+..+++...|+. ...++.+.++
T Consensus 238 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~a~~~~l~~---~~~~~~~~~~ 302 (396)
T 3jtx_A 238 LMFTSLSKRSNVPGLRSGFVAGDAELLKNFLL-------YR-----TYHGSAMSIPVQRASIAAWDD---EQHVIDNRRL 302 (396)
T ss_dssp EEEEESTTTSSCGGGCCEEEEECHHHHHHHHH-------HH-----HHHTCCCCHHHHHHHHHHHHC---CHHHHHHHHH
T ss_pred EEEeccccccCCcccceEEEEeCHHHHHHHHH-------HH-----hhcccCCCHHHHHHHHHHhCC---HHHHHHHHHH
Confidence 44567779888776 6778888888766321 11 112347888888888887763 3357778888
Q ss_pred HHHHHHHHHHHHhccC-------CcccccCCCCCcccHHHHHHH-HHccCccccCC--C--------CCCccceeeccCC
Q psy8733 529 SLQKSVLLYQEIDNSD-------KFYECPVQAGFPLDELFLKEA-KAHNMIQLKGH--R--------LVGGIRASIYNAI 590 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~-------~~~~~~v~~~~~~~~~~~~~~-~~~~i~~~~g~--~--------~~~~~r~~~~~a~ 590 (621)
.+++.+.+.+.+++.- ++|...-- .......|.+.+ +++||....|. + ..+.||++. . .
T Consensus 303 ~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~-~-~ 379 (396)
T 3jtx_A 303 YQEKFERVIPILQQVFDVKLPDASFYIWLKV-PDGDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIAL-V-A 379 (396)
T ss_dssp HHHHHHHHHHHHTTTSCCCCCSSSSEEEEEC-TTSCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEEC-C-S
T ss_pred HHHHHHHHHHHHHhcCCccCCCeeEEEEEEC-CCCCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEE-c-C
Confidence 8899999999997642 22211100 011235577666 67799865543 2 146799994 3 3
Q ss_pred CHHHHHHHHHHHHHH
Q psy8733 591 TVDEAVILVKFMKEF 605 (621)
Q Consensus 591 ~~~~~~~l~~~~~~~ 605 (621)
+.|+++.+++-|+++
T Consensus 380 ~~~~i~~~l~~l~~~ 394 (396)
T 3jtx_A 380 DVATCVKAAEDIVSL 394 (396)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999988888764
No 401
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=24.91 E-value=15 Score=37.89 Aligned_cols=138 Identities=8% Similarity=0.109 Sum_probs=88.0
Q ss_pred HHHhhcccccccCC--cEEeee---cHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHH------HHHhc
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIV---REDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFA------WIKRQ 519 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv---~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~------~~~~~ 519 (621)
++..|.-|.+|.+| ++.++. ++++++.... ... ....+.+.++|.++...+...|+ |..
T Consensus 254 i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~-- 323 (413)
T 3t18_A 254 VVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEA-------SLA-HSARCNWSNGTHAAQNILIELERAENKKIYEQ-- 323 (413)
T ss_dssp EEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHH-------HHH-HHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHH--
T ss_pred EEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHH-------HHH-HhhhccccCCChHHHHHHHHHhcChHHHHHHH--
Confidence 34467789999778 677887 8888766321 010 11123456788888888777664 333
Q ss_pred CChHHHHHHHHHHHHHHHHHHhccC--------CcccccCCCCCcccHHHHHHHHHccCccccCCCCCCccceeeccCCC
Q psy8733 520 GGLAKMEQNSLQKSVLLYQEIDNSD--------KFYECPVQAGFPLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAIT 591 (621)
Q Consensus 520 gg~~~~~~~~~~ka~~lY~~id~~~--------~~~~~~v~~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~ 591 (621)
.++.+.++-+++.+.+++.+++.. +||... + .....+|.+.++++||....| .+.||++ |+.++
T Consensus 324 -~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~-~--~~~~~~~~~~l~~~gv~v~~g---~~~iRis-~~~~~ 395 (413)
T 3t18_A 324 -ELVDLRNMLKSRADVFVTAAKENKLTMIPYFGGFFTFI-P--TDKAFDIVKDLEKENIFTIPS---AKGIRVA-ICGVG 395 (413)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTTCCCBCCCSSSCEEE-E--CSCHHHHHHHHHHTTEECEEC---SSEEEEC-TTTSC
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHcCCCccCCCceEEEEe-C--CCCHHHHHHHHHhCCEEEecC---CCceEEE-EeeCC
Confidence 256677888888999999998652 122111 0 112456888899999998776 4669997 55544
Q ss_pred HHH-HHHHHHHHHHHH
Q psy8733 592 VDE-AVILVKFMKEFR 606 (621)
Q Consensus 592 ~~~-~~~l~~~~~~~~ 606 (621)
.++ ++.|.++++++.
T Consensus 396 ~~~~l~~l~~~l~~~~ 411 (413)
T 3t18_A 396 EEKIPKLVQRLAFYTN 411 (413)
T ss_dssp GGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 433 666666666654
No 402
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=23.74 E-value=27 Score=40.19 Aligned_cols=146 Identities=14% Similarity=0.118 Sum_probs=98.6
Q ss_pred HHhhcccccc-cCCcEEeeecHh--HhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHH
Q psy8733 452 IIAGAQKNIG-PAGITVVIVRED--LLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQN 528 (621)
Q Consensus 452 ~~a~~qk~~G-paGl~v~iv~~~--~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~ 528 (621)
+..|.+|.+| |.|.++++++++ .+++.. +...... -...|||.+.+.-+...++++.+.|| +..-++
T Consensus 380 v~~S~hK~L~g~~~g~~i~~~~~~~~i~~~~--------~~~~~~~-~~s~sp~~~~iaal~aA~~~l~~~gg-~~~~~~ 449 (755)
T 2vyc_A 380 ATHSTHKLLNALSQASYIHVREGRGAINFSR--------FNQAYMM-HATTSPLYAICASNDVAVSMMDGNSG-LSLTQE 449 (755)
T ss_dssp EEEETTTSSSCCTTCEEEEEECCBTCCCHHH--------HHHHHHH-TSCSSCCHHHHHHHHHHHHHHSTHHH-HHHHHH
T ss_pred EEECccccccCcCCeeeeeecCcccccCHHH--------HHHHHHH-hCCCCHHHHHHHHHHHHHHHHHhhhH-HHHHHH
Confidence 5578889886 788889988876 222100 1111111 12368999999999999999887765 456667
Q ss_pred HHHHHHHHHHHHhccCC--------cccccC-------------------------------------------------
Q psy8733 529 SLQKSVLLYQEIDNSDK--------FYECPV------------------------------------------------- 551 (621)
Q Consensus 529 ~~~ka~~lY~~id~~~~--------~~~~~v------------------------------------------------- 551 (621)
..+.++.+.+.|.+-++ |+.+..
T Consensus 450 ~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~ 529 (755)
T 2vyc_A 450 VIDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQDCWVMHPGESWHGFKDIPDNWS 529 (755)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCCCCEESSCSEEECTTTCCEEEGGGSCHHHHHHCGGGTBCCTTCTTTCCTTCCTTSE
T ss_pred HHHHHHHHHHHHHhccccccccccceeeccCchhccccccccccccccccchhccchhhhhccCcccccccccccCCCcc
Confidence 78888888888866433 221100
Q ss_pred --CCC-----Cc------------cc-HHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHHHHHHHHHHHHHHc
Q psy8733 552 --QAG-----FP------------LD-ELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 552 --~~~-----~~------------~~-~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~~l~~~~~~~~~~~ 609 (621)
++. .. .+ ..+-+.++++||+.-+. ..+++|+..=+..|.++++.|++.|++|.+.+
T Consensus 530 ~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L~~~gI~~e~~--~~~~v~~~~~~g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 530 MLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRHGIVPTRT--TDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp EECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHHHTTTCCCSEE--CSSEEEEECCTTCCTTTTHHHHHHHHHHHHHH
T ss_pred ccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHHHHCCCEEeec--CCCeEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 110 00 11 35667888899987542 46789999999999999999999999998754
No 403
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=22.93 E-value=54 Score=33.95 Aligned_cols=144 Identities=12% Similarity=0.139 Sum_probs=89.0
Q ss_pred HHHhhcccccccCC--cEEeeec-HhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHh-cCChHHHH
Q psy8733 451 VIIAGAQKNIGPAG--ITVVIVR-EDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKR-QGGLAKME 526 (621)
Q Consensus 451 ~~~a~~qk~~GpaG--l~v~iv~-~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~-~gg~~~~~ 526 (621)
++..|..|.+|.+| ++.++.+ +.+++.. +. ...+.+++.+...++..+|+...- ...++.+.
T Consensus 266 i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~----------~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 331 (435)
T 3piu_A 266 HVVYSLSKDLGLPGFRVGAIYSNDDMVVAAA----------TK----MSSFGLVSSQTQHLLSAMLSDKKLTKNYIAENH 331 (435)
T ss_dssp EEEEESSSSSCCGGGCEEEEEESCHHHHHHH----------HH----HGGGSCCCHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred EEEEeeecccCCCceeEEEEEeCCHHHHHHH----------HH----HhhcCCCCHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 44567889999777 5778884 5554432 11 122345566667776666653221 12356777
Q ss_pred HHHHHHHHHHHHHHhccC--------Cccccc-CCCCC---c--ccHHHHHHHHHc-cCccccCC--CC--CCccceeec
Q psy8733 527 QNSLQKSVLLYQEIDNSD--------KFYECP-VQAGF---P--LDELFLKEAKAH-NMIQLKGH--RL--VGGIRASIY 587 (621)
Q Consensus 527 ~~~~~ka~~lY~~id~~~--------~~~~~~-v~~~~---~--~~~~~~~~~~~~-~i~~~~g~--~~--~~~~r~~~~ 587 (621)
++.+++.+.+.+.+.+.. ++|... +.+.. . ...++.+.+.++ ||....|. +. .+.||++.
T Consensus 332 ~~~~~~~~~l~~~L~~~g~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~- 410 (435)
T 3piu_A 332 KRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCF- 410 (435)
T ss_dssp HHHHHHHHHHHHHHHTTTCEECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEEC-
T ss_pred HHHHHHHHHHHHHHHhcCCcccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEe-
Confidence 888888899999987642 122211 00000 0 123566777665 99865543 32 56699995
Q ss_pred cCCCHHHHHHHHHHHHHHHHHc
Q psy8733 588 NAITVDEAVILVKFMKEFRHKH 609 (621)
Q Consensus 588 ~a~~~~~~~~l~~~~~~~~~~~ 609 (621)
+.++.|+++.+++-|+++.++.
T Consensus 411 ~~~~~e~i~~~l~~l~~~l~~~ 432 (435)
T 3piu_A 411 ANLPERTLDLAMQRLKAFVGEY 432 (435)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHH
T ss_pred eCCCHHHHHHHHHHHHHHHHHH
Confidence 6669999999999999887664
No 404
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=22.10 E-value=39 Score=33.43 Aligned_cols=142 Identities=13% Similarity=0.109 Sum_probs=88.0
Q ss_pred HHHHhhcccccccCCcEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHH
Q psy8733 450 GVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNS 529 (621)
Q Consensus 450 ~~~~a~~qk~~GpaGl~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~ 529 (621)
|++..++.|..||.|++++++++++++...+ +. .....++.+. .... ....+++. .++++.+.++.
T Consensus 208 d~~~~s~~K~g~~~~~g~l~~~~~~~~~~~~-------~~--~~~~~~~~~~-~~~~---~~~~~~l~-~~~~~~~~~~~ 273 (359)
T 1svv_A 208 DMFYIGATKAGGMFGEALIILNDALKPNARH-------LI--KQRGALMAKG-WLLG---IQFEVLMK-DNLFFELGAHS 273 (359)
T ss_dssp SEEEEECTTTTCSSCEEEEECSGGGCTTHHH-------HH--HHTTCCCTTT-HHHH---HHHHHHTS-TTHHHHHHHHH
T ss_pred CEEEEecccCCCCCceEEEEEcccHHHHHHH-------HH--hcCCcccccc-hhhH---HHHHHHHh-hhhHHHHHHHH
Confidence 4555678887679999999999998765321 00 0112222211 1111 11234444 36688888999
Q ss_pred HHHHHHHHHHHhccCCcccccCCCC-----CcccHHHHHHHHHc-cCccccCC-CCCCccceeeccCCCHHHHHHHHHHH
Q psy8733 530 LQKSVLLYQEIDNSDKFYECPVQAG-----FPLDELFLKEAKAH-NMIQLKGH-RLVGGIRASIYNAITVDEAVILVKFM 602 (621)
Q Consensus 530 ~~ka~~lY~~id~~~~~~~~~v~~~-----~~~~~~~~~~~~~~-~i~~~~g~-~~~~~~r~~~~~a~~~~~~~~l~~~~ 602 (621)
+++.+.+.+.+ +.+++ ......+ ..+...+.+.+.++ ||...... ...+.||++.-..++.|+++.+++.|
T Consensus 274 ~~~~~~l~~~L-~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l 351 (359)
T 1svv_A 274 NKMAAILKAGL-EACGI-RLAWPSASNQLFPILENTMIAELNNDFDMYTVEPLKDGTCIMRLCTSWATEEKECHRFVEVL 351 (359)
T ss_dssp HHHHHHHHHHH-HHTTC-CBSSCCSSSEECBEEEHHHHHHHTTTEECEEEEEETTTEEEEEEECCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHh-ccCCe-EEccCCccceEEEEcCHHHHHHHHHhcCEEEEecccCCCceEEEEccCcCCHHHHHHHHHHH
Confidence 99999999999 44443 2111111 12456788888888 99872111 12456999955568999999999999
Q ss_pred HHHHH
Q psy8733 603 KEFRH 607 (621)
Q Consensus 603 ~~~~~ 607 (621)
+++.+
T Consensus 352 ~~~~~ 356 (359)
T 1svv_A 352 KRLVA 356 (359)
T ss_dssp HHC--
T ss_pred HHHHh
Confidence 87654
No 405
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=20.35 E-value=84 Score=33.43 Aligned_cols=152 Identities=12% Similarity=0.083 Sum_probs=90.8
Q ss_pred hHHHHHhhcccccc-cCCcEEeeecHhH-hhhcCCCCCceeeeeecccCCCccCCCchhH----------HHHHHHHHHH
Q psy8733 448 FFGVIIAGAQKNIG-PAGITVVIVREDL-LEYALPITPTVFHFKINADNNSVYNTPPTFV----------VHVIQRVFAW 515 (621)
Q Consensus 448 ~~~~~~a~~qk~~G-paGl~v~iv~~~~-l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~----------iy~~~~vl~~ 515 (621)
..|++..+..|.+| |-|++.+++++.. ++. ....+..+. . . .+ .+|+... ..-+-.+++.
T Consensus 315 ~~D~i~~s~hK~l~~p~~~G~l~~~~~~~~~~-~~~~~~yl~-~--~---~~-~~~~~~~~~~~~~r~~~al~~~~~l~~ 386 (497)
T 2qma_A 315 RAHSISVDFHKLFYQTISCGALLVNDKSNFKF-LLHHADYLN-R--E---HD-ELPNLVDKSIATTKRFDALKVFMTMQN 386 (497)
T ss_dssp GCSEEEEETTTTTCCCSSCEEEEESCGGGGGG-GCC---------------------------CCSCCCTHHHHHHHHHH
T ss_pred cCCEEEEcchhccCCCcceEEEEEeCHHHHHH-hcCCchhcC-C--c---cc-cCCCccccCCCCCCchhHHHHHHHHHH
Confidence 45778889999886 8899999998664 432 111121110 0 0 00 0222221 1111123444
Q ss_pred HHhcCChHHHHHHHHHHHHHHHHHHhccCCccc-ccCCC--------CC-----cccHHHHHHHHHccCccccCC--CCC
Q psy8733 516 IKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYE-CPVQA--------GF-----PLDELFLKEAKAHNMIQLKGH--RLV 579 (621)
Q Consensus 516 ~~~~gg~~~~~~~~~~ka~~lY~~id~~~~~~~-~~v~~--------~~-----~~~~~~~~~~~~~~i~~~~g~--~~~ 579 (621)
+. ..|++.+.++..+.++.+++.|.+.++|-. .+..- .. ++...+.+.+.++|++...+- +..
T Consensus 387 lg-~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~l~~~l~~~l~~~G~~~~~~~~~~g~ 465 (497)
T 2qma_A 387 VG-PKALGDMYDHLLAQTLEVADMIRTNDQFELLAEPSLSTVLFRATHETADLDELNKALRLEALTRGIAVLGETIVDGK 465 (497)
T ss_dssp TC-HHHHHHHHHHHHHHHHHHHHHHHTCTTEEECSCCSSSEEEEEECCSSSCHHHHHHHHHHHHHHHTSCBCEEEEETTE
T ss_pred hC-HHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEcCCCceEEEEEEcCCccCHHHHHHHHHHHHHhCCCEEEEeeEECCE
Confidence 32 235778888899999999999998766421 11111 11 123457788889998865432 223
Q ss_pred Cccceee-ccCCCHHHHHHHHHHHHHHHHH
Q psy8733 580 GGIRASI-YNAITVDEAVILVKFMKEFRHK 608 (621)
Q Consensus 580 ~~~r~~~-~~a~~~~~~~~l~~~~~~~~~~ 608 (621)
+.||++. -+.++.|+++.+++.|+++.++
T Consensus 466 ~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 466 TALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp EEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 4699997 7899999999999999988764
No 406
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=20.32 E-value=2.8e+02 Score=28.41 Aligned_cols=143 Identities=12% Similarity=-0.009 Sum_probs=90.0
Q ss_pred hcccccccCC--cEEeeecHhHhhhcCCCCCceeeeeecccCCCccCCCchhHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q psy8733 455 GAQKNIGPAG--ITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQK 532 (621)
Q Consensus 455 ~~qk~~GpaG--l~v~iv~~~~l~~~~~~~p~~~~y~~~~~~~s~~nTP~~~~iy~~~~vl~~~~~~gg~~~~~~~~~~k 532 (621)
+..|.+|+ | ++.++.++++++...+ ....+++ +|.++....-..|+.+.+..=++.+.++.+.-
T Consensus 267 s~sK~~~~-G~riG~~~~~~~~~~~~~~-----------~~~~~t~--~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~ 332 (439)
T 3dxv_A 267 VLGKGLGG-GLPLSAVIAPAEILDCASA-----------FAMQTLH--GNPISAAAGLAVLETIDRDDLPAMAERKGRLL 332 (439)
T ss_dssp EECGGGGT-TSCCEEEEEEHHHHTSCSS-----------SSCCTTT--TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred EEcchhcC-CcceEEEEECHHHHhhhcC-----------CCcCCCc--ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 55688884 6 6889999999876422 1234555 67778888888888877633234444444433
Q ss_pred HHHHHHHHhccCC---------cccccCC-------CCCcccHHHHHHHHHccCccccCCCCCCccceeeccCCCHHHHH
Q psy8733 533 SVLLYQEIDNSDK---------FYECPVQ-------AGFPLDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAV 596 (621)
Q Consensus 533 a~~lY~~id~~~~---------~~~~~v~-------~~~~~~~~~~~~~~~~~i~~~~g~~~~~~~r~~~~~a~~~~~~~ 596 (621)
.+.|-+..+..+. |+...+. +.......|.+.+.++|+....|-...+.+|++.=-+++.|+++
T Consensus 333 ~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~t~e~i~ 412 (439)
T 3dxv_A 333 RDGLSELAKRHPLIGDIRGRGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTPPLTITETDIH 412 (439)
T ss_dssp HHHHHHHHHHCTTEEEEEEETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEESTTSCEEEECCCTTCCHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEEEEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCCCHHHHH
Confidence 4444444333331 1111110 01112455888899999987665333577999866678999999
Q ss_pred HHHHHHHHHHHHcCC
Q psy8733 597 ILVKFMKEFRHKHSR 611 (621)
Q Consensus 597 ~l~~~~~~~~~~~~~ 611 (621)
.+++.|+++.++..+
T Consensus 413 ~~l~~l~~~l~~~~~ 427 (439)
T 3dxv_A 413 KALDLLDRAFSELSA 427 (439)
T ss_dssp HHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999988876544
Done!