RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8733
         (621 letters)



>d2c0ra1 c.67.1.4 (A:2-362) Phosphoserine aminotransferase, PSAT
           {Bacillus circulans, subsp. alkalophilus [TaxId: 1397]}
          Length = 361

 Score =  135 bits (341), Expect = 8e-36
 Identities = 131/381 (34%), Positives = 188/381 (49%), Gaps = 84/381 (22%)

Query: 52  VINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNV 111
             NF AGPA LP EVLE  +   +DY+ TG+S+MEMSHR A Y  ++N+ QA L  LL  
Sbjct: 4   AYNFNAGPAALPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGN 63

Query: 112 PNNYKILFLQGGGTGMFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTG 171
           P  YK+LF+QGG                                +  FA + MN +    
Sbjct: 64  PTGYKVLFIQGG-------------------------------ASTQFAMIPMNFLKEGQ 92

Query: 172 KADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETV 231
            A+YV+TGSW+ KA  EA+  G                                      
Sbjct: 93  TANYVMTGSWASKALKEAKLIGDT------------------------------------ 116

Query: 232 DGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEFN 291
                                  + S Y+++P          A+YL+   NET++G +F 
Sbjct: 117 -----------------HVAASSEASNYMTLPKLQEIQLQDNAAYLHLTSNETIEGAQFK 159

Query: 292 YIPDSQGIPLVSDMSSNFLSRKFDVSKFGVIIAGAQKNIGPAGITVVIVREDLLEYALPI 351
             PD+  +PL+ DMSS+ LSR FD+++FG++ AGAQKN+GP+G+TVVIVREDL+  +   
Sbjct: 160 AFPDTGSVPLIGDMSSDILSRPFDLNQFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKH 219

Query: 352 TPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411
            PT+  +     NNS+YNTPP+F ++++  V  WI+ +GGL  ++Q + +K+ L+Y  ID
Sbjct: 220 LPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAID 279

Query: 412 NSDKFYECPVQAGCRSRMNVT 432
            S  FY   V    RS MN+T
Sbjct: 280 QSGGFYRGCVDVDSRSDMNIT 300



 Score = 87.4 bits (215), Expect = 4e-19
 Identities = 70/175 (40%), Positives = 105/175 (60%), Gaps = 13/175 (7%)

Query: 448 FFGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVVH 507
            FG++ AGAQKN+GP+G+TVVIVREDL+  +    PT+  +     NNS+YNTPP+F ++
Sbjct: 186 QFGLVYAGAQKNLGPSGVTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIY 245

Query: 508 VIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQAGFP----------- 556
           ++  V  WI+ +GGL  ++Q + +K+ L+Y  ID S  FY   V                
Sbjct: 246 MVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSGGFYRGCVDVDSRSDMNITFRLAS 305

Query: 557 --LDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKFMKEFRHKH 609
             L++ F+K ++    + LKGHR VGG+RASIYNA+  +    LV+FM+ F+   
Sbjct: 306 EELEKEFVKASEQEGFVGLKGHRSVGGLRASIYNAVPYESCEALVQFMEHFKRSR 360


>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT
           {Bacillus alcalophilus [TaxId: 1445]}
          Length = 360

 Score =  133 bits (334), Expect = 7e-35
 Identities = 121/381 (31%), Positives = 186/381 (48%), Gaps = 84/381 (22%)

Query: 52  VINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNV 111
           V NF AGP+ LP+  LE  ++ LL++  T +SVME+SHRS  Y +++   Q  LRELL +
Sbjct: 4   VFNFNAGPSALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQI 63

Query: 112 PNNYKILFLQGGGTGMFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTG 171
           PN+Y+ILF                               LQGG +  F  + MNL+ +  
Sbjct: 64  PNDYQILF-------------------------------LQGGASLQFTMLPMNLLTKGT 92

Query: 172 KADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETV 231
             +YV+TGSW                                  +  + + L    +   
Sbjct: 93  IGNYVLTGSW--------------------------------SEKALKEAKLLGETHIAA 120

Query: 232 DGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEFN 291
               +                      Y SIPD S +  +   +YL+   N T+ G ++ 
Sbjct: 121 STKANS---------------------YQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ 159

Query: 292 YIPDSQGIPLVSDMSSNFLSRKFDVSKFGVIIAGAQKNIGPAGITVVIVREDLLEYALPI 351
             P+    PL++DMSS+ LSR   V++FG+I AGAQKN+GP+G+TVVIV++DLL   +  
Sbjct: 160 NFPEINHAPLIADMSSDILSRPLKVNQFGMIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQ 219

Query: 352 TPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEID 411
            PT+  +  +  ++S+YNTPPTF +++++ V  WIK  GG   + + + +K+ ++Y  ID
Sbjct: 220 VPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTID 279

Query: 412 NSDKFYECPVQAGCRSRMNVT 432
            S+ FY    + G RS MNVT
Sbjct: 280 ESNGFYVGHAEKGSRSLMNVT 300



 Score = 97.8 bits (242), Expect = 1e-22
 Identities = 67/188 (35%), Positives = 105/188 (55%), Gaps = 14/188 (7%)

Query: 431 VTDIFFTFSHVQTGSAFFFGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKI 490
           + D+             F  +I AGAQKN+GP+G+TVVIV++DLL   +   PT+  +  
Sbjct: 170 IADMSSDILSRPLKVNQFG-MIYAGAQKNLGPSGVTVVIVKKDLLNTKVEQVPTMLQYAT 228

Query: 491 NADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECP 550
           +  ++S+YNTPPTF +++++ V  WIK  GG   + + + +K+ ++Y  ID S+ FY   
Sbjct: 229 HIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFYVGH 288

Query: 551 VQAGFP-------------LDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVI 597
            + G               L++ FL +AK    + L GHR VGG RASIYNA+ +D  + 
Sbjct: 289 AEKGSRSLMNVTFNLRNEELNQQFLAKAKEQGFVGLNGHRSVGGCRASIYNAVPIDACIA 348

Query: 598 LVKFMKEF 605
           L + M +F
Sbjct: 349 LRELMIQF 356


>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT
           {Escherichia coli [TaxId: 562]}
          Length = 360

 Score =  114 bits (286), Expect = 2e-28
 Identities = 129/382 (33%), Positives = 180/382 (47%), Gaps = 85/382 (22%)

Query: 52  VINFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNV 111
           + NF +GPA LP EVL++ ++ L D+   G SVME+SHR  ++ ++  + +   R+LLNV
Sbjct: 2   IFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNV 61

Query: 112 PNNYKILFLQGGGTGMFAAVAMNLISSSMNVPNNYKILFLQGGGTGMFAAVAMNLIGRTG 171
           P+NYK+                               LF  GGG G FAAV +N++G   
Sbjct: 62  PSNYKV-------------------------------LFCHGGGRGQFAAVPLNILGDKT 90

Query: 172 KADYVVTGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETV 231
            ADYV  G W+  A  EA+KY   N+                             DN   
Sbjct: 91  TADYVDAGYWAASAIKEAKKYCTPNVFDA-------KVTVDGLRAVKPMREWQLSDNAA- 142

Query: 232 DGSWSKKAAAEAEKYGKVNLVIPKVSKYVSIPDQSTWNRDPEASYLYYCDNETVDGVEFN 291
                                                       Y++YC NET+DG+  +
Sbjct: 143 --------------------------------------------YMHYCPNETIDGIAID 158

Query: 292 YIPDSQGIPLVS-DMSSNFLSRKFDVSKFGVIIAGAQKNIGPAGITVVIVREDLLEYALP 350
             PD     +V+ D SS  LSR  DVS++GVI AGAQKNIGPAG+T+VIVREDLL  A  
Sbjct: 159 ETPDFGADVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANI 218

Query: 351 ITPTVFHFKINADNNSVYNTPPTFVVHVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEI 410
             P++  + I  DN S++NTPPTF  ++   VF W+K  GG+A+M++ + Q+   L   +
Sbjct: 219 ACPSILDYSILNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKIN-QQKAELLYGV 277

Query: 411 DNSDKFYECPVQAGCRSRMNVT 432
            ++  FY   V    RSRMNV 
Sbjct: 278 IDNSDFYRNDVAKRNRSRMNVP 299



 Score = 90.6 bits (223), Expect = 3e-20
 Identities = 81/175 (46%), Positives = 110/175 (62%), Gaps = 12/175 (6%)

Query: 447 FFFGVIIAGAQKNIGPAGITVVIVREDLLEYALPITPTVFHFKINADNNSVYNTPPTFVV 506
             +GVI AGAQKNIGPAG+T+VIVREDLL  A    P++  + I  DN S++NTPPTF  
Sbjct: 185 SRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNGSMFNTPPTFAW 244

Query: 507 HVIQRVFAWIKRQGGLAKMEQNSLQKSVLLYQEIDNSDKFYECPVQAG---------FP- 556
           ++   VF W+K  GG+A+M++ + QK+ LLY  IDNSD +     +              
Sbjct: 245 YLSGLVFKWLKANGGVAEMDKINQQKAELLYGVIDNSDFYRNDVAKRNRSRMNVPFQLAD 304

Query: 557 --LDELFLKEAKAHNMIQLKGHRLVGGIRASIYNAITVDEAVILVKFMKEFRHKH 609
             LD+LFL+E+ A  +  LKGHR+VGG+RASIYNA+ ++    L  FM EF  +H
Sbjct: 305 SALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRH 359


>d1h0ca_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase {Human
           (Homo sapiens) [TaxId: 9606]}
          Length = 388

 Score = 68.6 bits (166), Expect = 5e-13
 Identities = 12/82 (14%), Positives = 29/82 (35%), Gaps = 12/82 (14%)

Query: 53  INFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVP 112
           +  G GP+ LP  ++                +  +   S D  +I ++ +  ++ +    
Sbjct: 21  LLLGPGPSNLPPRIMAA------------GGLQMIGSMSKDMYQIMDEIKEGIQYVFQTR 68

Query: 113 NNYKILFLQGGGTGMFAAVAMN 134
           N   ++    G   + AA+   
Sbjct: 69  NPLTLVISGSGHCALEAALVNV 90


>d1m32a_ c.67.1.3 (A:) 2-aminoethylphosphonate transaminase
           {Salmonella typhimurium [TaxId: 90371]}
          Length = 361

 Score = 67.9 bits (164), Expect = 8e-13
 Identities = 14/87 (16%), Positives = 22/87 (25%), Gaps = 12/87 (13%)

Query: 55  FGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNN 114
              GP    R V E             +     +        +    +  L  L      
Sbjct: 4   LTPGPLTTSRTVKEA------------MLFDSCTWDDDYNIGVVEQIRQQLTALATASEG 51

Query: 115 YKILFLQGGGTGMFAAVAMNLISSSMN 141
           Y  + LQG G+    AV  + +     
Sbjct: 52  YTSVLLQGSGSYAVEAVLGSALGPQDK 78


>d1vjoa_ c.67.1.3 (A:) Alanine-glyoxylate aminotransferase
           {Cyanobacteria (Nostoc sp. pcc 7120) [TaxId: 103690]}
          Length = 377

 Score = 67.4 bits (163), Expect = 1e-12
 Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 13/88 (14%)

Query: 53  INFGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVP 112
           +  G GP+     VL+             ++V  + H    +  + ++ Q+ LR +    
Sbjct: 20  LLLGPGPSNAHPSVLQA------------MNVSPVGHLDPAFLALMDEIQSLLRYVWQTE 67

Query: 113 NNYKILFLQGGGTGMFAAVAMNLISSSM 140
           N   I    G GT    A   N +    
Sbjct: 68  NPLTIAV-SGTGTAAMEATIANAVEPGD 94


>d2ch1a1 c.67.1.3 (A:2-389) 3-hydroxykynurenine transaminase
           {Malaria mosquito (Anopheles gambiae) [TaxId: 7165]}
          Length = 388

 Score = 65.9 bits (159), Expect = 4e-12
 Identities = 15/96 (15%), Positives = 33/96 (34%), Gaps = 13/96 (13%)

Query: 55  FGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNN 114
            G GP+   + VL              ++   +S+  A+  +  ++ +  LR +     N
Sbjct: 21  MGPGPSNCSKRVLTA------------MTNTVLSNFHAELFRTMDEVKDGLRYIFQTE-N 67

Query: 115 YKILFLQGGGTGMFAAVAMNLISSSMNVPNNYKILF 150
              + + G       A+  NL+     V      ++
Sbjct: 68  RATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIW 103


>d2bkwa1 c.67.1.3 (A:3-384) Alanine-glyoxylate aminotransferase
           {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 382

 Score = 65.1 bits (157), Expect = 8e-12
 Identities = 17/86 (19%), Positives = 26/86 (30%), Gaps = 14/86 (16%)

Query: 55  FGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLN--VP 112
              GP  L   V +             + V  + H S ++  I        R +      
Sbjct: 7   LIPGPIILSGAVQKA------------LDVPSLGHTSPEFVSIFQRVLKNTRAVFKSAAA 54

Query: 113 NNYKILFLQGGGTGMFAAVAMNLISS 138
           +  +   L G GT  +   A N I S
Sbjct: 55  SKSQPFVLAGSGTLGWDIFASNFILS 80


>d1iuga_ c.67.1.3 (A:) Subgroup IV putative aspartate
           aminotransferase {Thermus thermophilus [TaxId: 274]}
          Length = 348

 Score = 63.9 bits (154), Expect = 2e-11
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 14/86 (16%)

Query: 55  FGAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNN 114
              GP +L  + LE             ++  ++ HR+    ++    +  LRE       
Sbjct: 4   LTPGPVRLHPKALEA------------LARPQLHHRTEAAREVFLKARGLLREAFRT--E 49

Query: 115 YKILFLQGGGTGMFAAVAMNLISSSM 140
            ++L L G GT    A+  NL +   
Sbjct: 50  GEVLILTGSGTLAMEALVKNLFAPGE 75


>d1elua_ c.67.1.3 (A:) Cystine C-S lyase C-des {Synechocystis sp.
           [TaxId: 1143]}
          Length = 381

 Score = 30.7 bits (67), Expect = 0.60
 Identities = 15/73 (20%), Positives = 22/73 (30%), Gaps = 4/73 (5%)

Query: 56  GAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELLNVPNNY 115
             G   LP   LE +       +  G   +     +    ++    + AL E  NV  N 
Sbjct: 13  FGGQGILPTVALEAITAMYGYLQENGPFSI---AANQHIQQLIAQLRQALAETFNVDPNT 69

Query: 116 KILFLQGGGTGMF 128
            I       TG  
Sbjct: 70  -ITITDNVTTGCD 81


>d1vfja_ d.58.5.1 (A:) PII (product of glnB) {Thermus thermophilus
          [TaxId: 274]}
          Length = 116

 Score = 27.9 bits (62), Expect = 1.4
 Identities = 7/33 (21%), Positives = 15/33 (45%)

Query: 65 EVLEEVKETLLDYESTGISVMEMSHRSADYTKI 97
          E L EV + L   E  G+++  +     +  ++
Sbjct: 11 EKLNEVLKALFQAEVRGLTLSRVQGHGGETERV 43


>d1hqsa_ c.77.1.1 (A:) Isocitrate dehydrogenase, ICDH {Bacillus
           subtilis [TaxId: 1423]}
          Length = 423

 Score = 29.3 bits (65), Expect = 1.6
 Identities = 11/19 (57%), Positives = 14/19 (73%)

Query: 139 SMNVPNNYKILFLQGGGTG 157
            +NVPNN  I F++G GTG
Sbjct: 13  VLNVPNNPIIPFIEGDGTG 31



 Score = 28.9 bits (64), Expect = 2.0
 Identities = 12/18 (66%), Positives = 14/18 (77%)

Query: 109 LNVPNNYKILFLQGGGTG 126
           LNVPNN  I F++G GTG
Sbjct: 14  LNVPNNPIIPFIEGDGTG 31


>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress
           (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 290

 Score = 28.6 bits (63), Expect = 2.4
 Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 8/83 (9%)

Query: 16  IAESTQF-HSLYLGNIIRNTYLDSRIHT-----TAMSSAAHP--VINFGAGPAKLPREVL 67
           + +S  +   L L  +I+ T  D   +        + S  +P  V+  G G   + REV 
Sbjct: 40  VFQSATYGKVLVLDGVIQLTERDECAYQEMITHLPLCSIPNPKKVLVIGGGDGGVLREVA 99

Query: 68  EEVKETLLDYESTGISVMEMSHR 90
                  +D       V+++S +
Sbjct: 100 RHASIEQIDMCEIDKMVVDVSKQ 122


>d1qz9a_ c.67.1.3 (A:) Kynureninase {Pseudomonas fluorescens [TaxId:
           294]}
          Length = 404

 Score = 28.1 bits (61), Expect = 3.1
 Identities = 13/86 (15%), Positives = 28/86 (32%), Gaps = 5/86 (5%)

Query: 51  PVINF-GAGPAKLPREVLEEVKETLLDYESTGISVMEMSHRSADYTKINNDTQAALRELL 109
            VI   G      P   L   +  + +    G+     S  SA +  ++      L  L+
Sbjct: 27  GVIYLDGNSLGARPVAALARAQAVIAEEWGNGLI---RSWNSAGWRDLSERLGNRLATLI 83

Query: 110 NVPNNYKILFLQGGGTGMFAAVAMNL 135
              +  +++        +F  ++  L
Sbjct: 84  GARDG-EVVVTDTTSINLFKVLSAAL 108


>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
           tuberculosis [TaxId: 1773]}
          Length = 182

 Score = 27.3 bits (59), Expect = 4.0
 Identities = 6/28 (21%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 85  MEMSHRS-ADYTKINNDTQAALRELLNV 111
           +E++ +   D   +N   ++A  EL+++
Sbjct: 153 IELAAQGDFDKVVVNRRLESACAELVSL 180


>d1od5a1 b.82.1.2 (A:7-251) Seed storage 7S protein {Soybean
           (Glycine max), glycinin A3B4 [TaxId: 3847]}
          Length = 245

 Score = 27.5 bits (61), Expect = 4.2
 Identities = 7/32 (21%), Positives = 15/32 (46%)

Query: 1   MSSNFLSRKFDVSKLIAESTQFHSLYLGNIIR 32
            S +FL++ F+ ++  AE  +        I+ 
Sbjct: 202 FSKHFLAQSFNTNEDTAEKLRSPDDERKQIVT 233


>d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD
           {Mycobacterium tuberculosis [TaxId: 1773]}
          Length = 260

 Score = 27.1 bits (58), Expect = 5.3
 Identities = 12/59 (20%), Positives = 17/59 (28%), Gaps = 5/59 (8%)

Query: 284 TVDGVEFNYIP-----DSQGIPLVSDMSSNFLSRKFDVSKFGVIIAGAQKNIGPAGITV 337
              G++F   P     DS G   V+         K      G  +        P G+ V
Sbjct: 6   PFTGIDFRLSPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAV 64


>d1pb1a_ c.77.1.1 (A:) Isocitrate dehydrogenase, ICDH {Escherichia
           coli [TaxId: 562]}
          Length = 416

 Score = 27.0 bits (59), Expect = 8.4
 Identities = 9/18 (50%), Positives = 12/18 (66%)

Query: 109 LNVPNNYKILFLQGGGTG 126
           LNVP N  I +++G G G
Sbjct: 21  LNVPENPIIPYIEGDGIG 38


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.319    0.134    0.390 

Gapped
Lambda     K      H
   0.267   0.0409    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,307,885
Number of extensions: 110807
Number of successful extensions: 391
Number of sequences better than 10.0: 1
Number of HSP's gapped: 380
Number of HSP's successfully gapped: 35
Length of query: 621
Length of database: 2,407,596
Length adjustment: 91
Effective length of query: 530
Effective length of database: 1,158,166
Effective search space: 613827980
Effective search space used: 613827980
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)