BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8734
(264 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307177339|gb|EFN66512.1| HD domain-containing protein 3 [Camponotus floridanus]
Length = 208
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 100/169 (59%), Positives = 129/169 (76%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++K +FA+ KH QRRKD TPYI HP+ VA+IL G V PVVI++A+LHDTVEDT
Sbjct: 37 VIKCANFAAEKHRNQRRKDIAQTPYINHPLGVANILIQEGNVFEPVVILAAILHDTVEDT 96
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTTF EIE+EFG +V +V+E+TD+K +++ ERKR QI HAP+ S EAKLVKLADKL+NL
Sbjct: 97 DTTFAEIEKEFGHKVCQIVQEVTDDKTLSKAERKRLQIEHAPNISREAKLVKLADKLYNL 156
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYC 255
RD+E+S+P+ WT ER +YF WA+ V+ G R TN +E ELD LFA+ C
Sbjct: 157 RDLEKSVPIGWTNERVKEYFEWAKAVIDGCRQTNPALERELDILFARNC 205
>gi|113931302|ref|NP_001039099.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
[Xenopus (Silurana) tropicalis]
gi|119370654|sp|Q28C98.1|MESH1_XENTR RecName: Full=Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase MESH1; AltName: Full=HD
domain-containing protein 3; AltName: Full=Metazoan SpoT
homolog 1; Short=MESH1; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|89268951|emb|CAJ81555.1| novel HD domain containing protein [Xenopus (Silurana) tropicalis]
gi|195539934|gb|AAI67936.1| novel HD domain containing protein [Xenopus (Silurana) tropicalis]
Length = 179
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 134/172 (77%), Gaps = 1/172 (0%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S DA + I++A +FA+ KH QRRKDPE TPYI HP+ VA IL+H G +++ V+ +ALL
Sbjct: 2 SSDAAL-ILEAANFAAEKHKQQRRKDPEKTPYINHPLGVARILSHEGGITDTAVLQAALL 60
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
HDTVEDT+TTFEEIE FG VR++VEE+TD+K + + ERKR Q+ HAPH S +AKLVKL
Sbjct: 61 HDTVEDTNTTFEEIELHFGQDVRNIVEEVTDDKTLPKMERKRLQMEHAPHCSQKAKLVKL 120
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
ADKL+NLRD++R P W+E+R +YF WA +VV+GLRGTN+ +E +LD +F
Sbjct: 121 ADKLYNLRDLKRCTPEGWSEQRVQEYFQWASEVVKGLRGTNSILEGKLDHMF 172
>gi|350420283|ref|XP_003492460.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Bombus impatiens]
Length = 220
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/167 (59%), Positives = 129/167 (77%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++K +F + KH QRRKD TPYI HP+ VA+IL G + +PVVII+ALLHDTVEDT
Sbjct: 37 VIKCANFVAIKHKDQRRKDENETPYINHPIGVANILVQEGNIHDPVVIIAALLHDTVEDT 96
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTTFEEIE +FG VR++V+ELTD+K + + ERKR QI +AP SH+AKLVKLADKL+NL
Sbjct: 97 DTTFEEIETQFGTEVRNIVKELTDDKSLPKVERKRLQIENAPKCSHKAKLVKLADKLYNL 156
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
RD+++++PV W+E+R +YF WA+ VV G R TN +E ELD +FAK
Sbjct: 157 RDLQKAIPVGWSEDRVKEYFKWAKAVVDGCRRTNFNLERELDLIFAK 203
>gi|156551648|ref|XP_001600589.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Nasonia vitripennis]
Length = 207
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 130/172 (75%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+VK +FA+ KH QRR + E TPYI HP+ VA+IL G+V +P VI++ALLHDTVEDT
Sbjct: 33 VVKCANFAAIKHSRQRRLNKEKTPYINHPIGVANILVEEGEVCDPAVIVAALLHDTVEDT 92
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTTFEEIE FG ++R +VEE+TD+K + + ERKR QI HAP+SSHEAKLVKLADKL+NL
Sbjct: 93 DTTFEEIEEHFGAKIRKIVEEVTDDKSLPKLERKRLQIEHAPNSSHEAKLVKLADKLYNL 152
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCTPR 258
RD+++ +P W+ ER +YF WA+ VV GL+GTN +E LD +F K+ +
Sbjct: 153 RDLKKEIPEGWSIERVNEYFKWAKLVVDGLKGTNIKLEKLLDDMFIKHSETK 204
>gi|340713287|ref|XP_003395176.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Bombus terrestris]
Length = 220
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 128/167 (76%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++K +FA+ KH QRRKD TPYI HP+ VA+IL G + +PVVII+ALLHDTVEDT
Sbjct: 37 VIKCANFAAIKHKDQRRKDENETPYINHPIGVANILVQEGSIHDPVVIIAALLHDTVEDT 96
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTTFEEIE +FG V +V+ELTD+K + + ERKR QI +AP SH+AKL+KLADKL+NL
Sbjct: 97 DTTFEEIETQFGTEVCKIVKELTDDKSLPKVERKRLQIENAPKCSHKAKLIKLADKLYNL 156
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
RD+++++PV W+E+R +YF WA+ VV G R TN +E ELD +FAK
Sbjct: 157 RDLQKAIPVGWSEDRVREYFKWAKAVVDGCRRTNFNLERELDLIFAK 203
>gi|57048362|ref|XP_545862.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 [Canis lupus familiaris]
Length = 179
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/166 (59%), Positives = 124/166 (74%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+V+A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLVEAADFAARKHRLQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGTQVRRLVEEVTDDKTLPKLERKRLQVEQAPHSSPAAKLVKLADKLYN 126
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LRD+ R P W+E R +YF WA VV+GL+GTN P+E L LF
Sbjct: 127 LRDLNRCTPEGWSERRVQEYFEWAAHVVKGLQGTNPPLEEALKQLF 172
>gi|410960536|ref|XP_003986845.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 [Felis catus]
Length = 179
Score = 207 bits (527), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/166 (60%), Positives = 123/166 (74%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+V+A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH V++ VV+ +ALLHDTVED
Sbjct: 7 QLVEAADFAARKHRLQRRKDPEGTPYINHPIGVARILTHEAGVTDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LRD+ R P W+E R +YF WA VV+GLRGTN +E L LF
Sbjct: 127 LRDLNRCTPEGWSEHRVQEYFEWAAQVVKGLRGTNRQLEEALKQLF 172
>gi|354503310|ref|XP_003513724.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Cricetulus griseus]
gi|344256695|gb|EGW12799.1| HD domain-containing protein 3 [Cricetulus griseus]
Length = 179
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 125/168 (74%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH V++ VV+ +ALLHDTV
Sbjct: 5 VAQLLEAADFAAQKHRQQRRKDPEGTPYINHPIGVARILTHEAGVTDVVVLQAALLHDTV 64
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDTDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL
Sbjct: 65 EDTDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRQQVEQAPHSSPGAKLVKLADKL 124
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
+NLRD+ R P W+E+R +YF WA VV+GL+GTN +E L LF
Sbjct: 125 YNLRDLNRCTPQGWSEQRVQEYFEWAAQVVKGLQGTNQQLEEALKQLF 172
>gi|21312092|ref|NP_081088.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 [Mus
musculus]
gi|81904689|sp|Q9D114.1|MESH1_MOUSE RecName: Full=Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase MESH1; AltName: Full=HD
domain-containing protein 3; AltName: Full=Metazoan SpoT
homolog 1; Short=MESH1; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|12835118|dbj|BAB23158.1| unnamed protein product [Mus musculus]
gi|54887363|gb|AAH38310.1| HD domain containing 3 [Mus musculus]
gi|148675053|gb|EDL07000.1| HD domain containing 3, isoform CRA_c [Mus musculus]
Length = 179
Score = 206 bits (524), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 98/166 (59%), Positives = 124/166 (74%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+HKH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLLEAADFAAHKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRQQVEQAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 127 LRDLNRCTPTGWSEHRVQEYFEWAAQVVKGLQGTNQQLEEALKQLF 172
>gi|383861612|ref|XP_003706279.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Megachile rotundata]
Length = 227
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 94/166 (56%), Positives = 128/166 (77%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I+K +FA+ KH +++RKD EGTPYI HP+ VA+IL G++ +PVVI+SALLHDTVEDT
Sbjct: 37 IIKCVNFAAIKHKYEKRKDAEGTPYINHPIGVANILIQEGQIYDPVVIVSALLHDTVEDT 96
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTT EIE +FG V ++V+E+TD+K + + ERKR QI ++P S++AKLVKLADKL+NL
Sbjct: 97 DTTLAEIEGQFGTEVCNIVKEVTDDKSLPKQERKRLQIENSPKLSYKAKLVKLADKLYNL 156
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFA 252
RD+E++ PV WT ER +YF W++ V+ G R TN +E ELD +FA
Sbjct: 157 RDLEQNTPVGWTPERVKEYFKWSKAVIDGCRRTNLNLETELDKIFA 202
>gi|126273784|ref|XP_001369058.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Monodelphis domestica]
Length = 179
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 128/172 (74%), Gaps = 1/172 (0%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S DA + +++A DFA+ KH QRRKDPE TPYI HP+ VAHILT V++ V+ +ALL
Sbjct: 2 SSDAAL-LLEAVDFAARKHSKQRRKDPEKTPYINHPIGVAHILTKEAAVTDIAVLQAALL 60
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
HDTVEDTDTT EE+E FG VRS+VEE+TDNK +++ ERK+ Q+ +A HSS AKLVKL
Sbjct: 61 HDTVEDTDTTLEEVEEHFGAEVRSIVEEVTDNKALSKLERKQLQVKNAAHSSRPAKLVKL 120
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
ADKL+NLRD++R PV W+E+R +YF WA V +GL+GT+ +E L LF
Sbjct: 121 ADKLYNLRDLKRCTPVGWSEQRVQEYFEWAAQVAKGLQGTSPQMEEALQKLF 172
>gi|242021810|ref|XP_002431336.1| hypothetical protein, conserved [Pediculus humanus corporis]
gi|212516604|gb|EEB18598.1| hypothetical protein, conserved [Pediculus humanus corporis]
Length = 182
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 132/174 (75%)
Query: 81 PDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLH 140
++I VK +FA+ KH FQ+RK+ E TPYI HP+ VA+ILT+ G +++ ++ +ALLH
Sbjct: 6 SNSISAFVKCVNFAAVKHSFQKRKNVEQTPYINHPIGVAYILTNEGNITDLDILQAALLH 65
Query: 141 DTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLA 200
DTVEDTDTT EEI FG +V ++V+E TD+K++ ++ERK+ QI+++ SS EAKLVKLA
Sbjct: 66 DTVEDTDTTLEEIASIFGIKVANIVKECTDDKNLPKEERKKLQIINSKSSSREAKLVKLA 125
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKY 254
DKL+NLRD++R PV WT ER ++YF WA +VV GL+GTN IE+EL LF K+
Sbjct: 126 DKLYNLRDLDRETPVGWTSERVSEYFKWAYEVVNGLKGTNQQIESELSKLFEKH 179
>gi|301768839|ref|XP_002919832.1| PREDICTED: HD domain-containing protein 3-like [Ailuropoda
melanoleuca]
gi|281350340|gb|EFB25924.1| hypothetical protein PANDA_008496 [Ailuropoda melanoleuca]
Length = 179
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/166 (59%), Positives = 123/166 (74%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+V+A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLVEAADFAARKHRLQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 127 LRDLNRCTPEGWSEHRVQEYFEWAAQVVKGLQGTNRQLEEALKQLF 172
>gi|157819889|ref|NP_001100998.1| HD domain-containing protein 3 [Rattus norvegicus]
gi|149057310|gb|EDM08633.1| HD domain containing 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 179
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/166 (59%), Positives = 123/166 (74%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLLEAADFAAQKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKLHN
Sbjct: 67 TDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRQQVEQAPHSSPGAKLVKLADKLHN 126
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 127 LRDLNRCTPKGWSEHRVQEYFEWAAQVVKGLQGTNQQLEEALKQLF 172
>gi|291410515|ref|XP_002721532.1| PREDICTED: HD domain containing 3 [Oryctolagus cuniculus]
Length = 179
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 127/168 (75%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPE TPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLLEAADFAARKHRQQRRKDPERTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ HAPHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRLQVEHAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
LRD++R P W+E R +YF WA VV+GLRGTN +E L+ LF++
Sbjct: 127 LRDLKRCTPEGWSEPRVQEYFEWAAQVVKGLRGTNRQLEEALEQLFSE 174
>gi|270003041|gb|EEZ99488.1| hypothetical protein TcasGA2_TC000063 [Tribolium castaneum]
Length = 182
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 127/168 (75%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++K +FA+ KH QRRK+ TPYI HP+ VA+ILTH ++ + V+ +ALLHDTVED
Sbjct: 10 DLLKCVNFAAEKHKDQRRKNASKTPYINHPIGVAYILTHEAEIDDLDVLQAALLHDTVED 69
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
T TTFEEIE+ FG RVR +VEE+TD+K + ++ERKR QI HAP +SH+AKLVKLADKL+N
Sbjct: 70 TATTFEEIEQVFGKRVRDIVEEVTDDKSLPKEERKRLQIEHAPGASHQAKLVKLADKLYN 129
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
LRD+E S P W+E+R +YF W+ VV GLRGTN +E LD +F +
Sbjct: 130 LRDLENSAPEGWSEQRIQEYFTWSSKVVAGLRGTNPALERSLDQVFRR 177
>gi|440906560|gb|ELR56811.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1,
partial [Bos grunniens mutus]
Length = 180
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 124/168 (73%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTV
Sbjct: 6 VAQLLEAADFAARKHQRQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTV 65
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDTDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ HAP SS AKLVKLADKL
Sbjct: 66 EDTDTTLDEVELHFGDQVRRLVEEVTDDKTLPKLERKRLQVEHAPQSSPGAKLVKLADKL 125
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
+NLRD+ R P WTE R +YF WA VV+GL+GTN +E L LF
Sbjct: 126 YNLRDLNRCTPEGWTEHRVQEYFEWAAQVVKGLQGTNRQLEEALRQLF 173
>gi|348580087|ref|XP_003475810.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Cavia porcellus]
Length = 179
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 124/168 (73%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTV
Sbjct: 5 VAQLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTV 64
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDTDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL
Sbjct: 65 EDTDTTLDEVELHFGTQVRRLVEEVTDDKTLPKLERKRQQVEQAPHSSPGAKLVKLADKL 124
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
+NLRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 125 YNLRDLNRCTPAGWSEHRVQEYFEWAAQVVKGLQGTNQRLEESLQQLF 172
>gi|91092872|ref|XP_969942.1| PREDICTED: similar to novel HD domain containing protein [Tribolium
castaneum]
Length = 179
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 127/168 (75%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++K +FA+ KH QRRK+ TPYI HP+ VA+ILTH ++ + V+ +ALLHDTVED
Sbjct: 7 DLLKCVNFAAEKHKDQRRKNASKTPYINHPIGVAYILTHEAEIDDLDVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
T TTFEEIE+ FG RVR +VEE+TD+K + ++ERKR QI HAP +SH+AKLVKLADKL+N
Sbjct: 67 TATTFEEIEQVFGKRVRDIVEEVTDDKSLPKEERKRLQIEHAPGASHQAKLVKLADKLYN 126
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
LRD+E S P W+E+R +YF W+ VV GLRGTN +E LD +F +
Sbjct: 127 LRDLENSAPEGWSEQRIQEYFTWSSKVVAGLRGTNPALERSLDQVFRR 174
>gi|431920248|gb|ELK18283.1| HD domain-containing protein 3 [Pteropus alecto]
Length = 179
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 124/166 (74%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLLEAADFAARKHRRQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGAQVRGLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LRD++R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 127 LRDLKRCTPEGWSEHRVQEYFEWAAQVVKGLQGTNQQLEEALTQLF 172
>gi|300794208|ref|NP_001179885.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 [Bos
taurus]
gi|296475514|tpg|DAA17629.1| TPA: HD domain containing 3-like [Bos taurus]
Length = 179
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 124/168 (73%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTV
Sbjct: 5 VAQLLEAADFAARKHQRQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTV 64
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDTDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ HAP SS AKLVKLADKL
Sbjct: 65 EDTDTTLDEVELHFGDQVRRLVEEVTDDKTLPKLERKRLQVEHAPQSSPGAKLVKLADKL 124
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
+NLRD+ R P WTE R +YF WA VV+GL+GTN +E L LF
Sbjct: 125 YNLRDLNRCTPEGWTEHRVQEYFEWAAQVVKGLQGTNRQLEEALRQLF 172
>gi|405953565|gb|EKC21202.1| HD domain-containing protein 3 [Crassostrea gigas]
Length = 177
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 127/168 (75%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
++ I+K ++FA+ KH QRRKD E TPYI HP+ VA+ILT +++ VI +ALLHDTV
Sbjct: 4 VLEIIKCSNFAAIKHKDQRRKDEEKTPYINHPIGVANILTEEAGIADVAVIQAALLHDTV 63
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDTDTTFEEI+ FG V +V+E+TD K++ + RK+ QI HAPH+S++AKLVKLADKL
Sbjct: 64 EDTDTTFEEIQALFGEEVTGIVKEVTDEKNLPKLVRKQKQIEHAPHASYKAKLVKLADKL 123
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
+NLRD+ R PV W++ER T+YF WA VV+GL+GTN P+E L LF
Sbjct: 124 YNLRDLNRCTPVGWSQERVTEYFQWAHKVVEGLKGTNQPMEDSLQQLF 171
>gi|62955643|ref|NP_001017835.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
[Danio rerio]
gi|82178255|sp|Q568P1.1|MESH1_DANRE RecName: Full=Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase MESH1; AltName: Full=HD
domain-containing protein 3; AltName: Full=Metazoan SpoT
homolog 1; Short=MESH1; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|62204317|gb|AAH92780.1| Zgc:110184 [Danio rerio]
Length = 180
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 95/165 (57%), Positives = 124/165 (75%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+++ +FA+ KH QR KDPEGTPYI HP+ VA IL+H G++++ VI +ALLHDTVEDT
Sbjct: 9 LLETVNFAAEKHRNQRHKDPEGTPYINHPIGVARILSHEGEITDVEVIQAALLHDTVEDT 68
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTTFEE+E FG V +V+ +TD+K + + ER+R Q+ HAPH SH+AKLVKLADKL+NL
Sbjct: 69 DTTFEELESVFGATVARIVQGVTDDKSLPKAERERQQVEHAPHCSHQAKLVKLADKLYNL 128
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD+ R P W+ +R +YF WA VV+GLRGTNA IE +L LF
Sbjct: 129 RDLNRCTPEGWSAQRVQEYFEWASQVVKGLRGTNAAIEEKLQQLF 173
>gi|149690946|ref|XP_001502850.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Equus caballus]
Length = 179
Score = 203 bits (517), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 96/165 (58%), Positives = 124/165 (75%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+++A DFA+ KH +QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVEDT
Sbjct: 8 LLEAADFAARKHRWQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDT 67
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+NL
Sbjct: 68 DTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLYNL 127
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD+ R P W+E+R +YF WA VV+GL+GTN +E L L
Sbjct: 128 RDLNRCTPEGWSEQRVQEYFEWAAQVVKGLQGTNRQLEEALKQLL 172
>gi|403258175|ref|XP_003921651.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 [Saimiri boliviensis boliviensis]
Length = 179
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 122/166 (73%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ V+ +ALLHDTVED
Sbjct: 7 QLLEAVDFAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIAVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKLHN
Sbjct: 67 TDTTLDEVELHFGAQVRCLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLHN 126
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 127 LRDLNRCTPEGWSEHRVQEYFEWAAQVVKGLQGTNQQLEEALKRLF 172
>gi|122065202|sp|Q8N4P3.3|MESH1_HUMAN RecName: Full=Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase MESH1; AltName: Full=HD
domain-containing protein 3; AltName: Full=Metazoan SpoT
homolog 1; Short=MESH1; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|119622531|gb|EAX02126.1| HD domain containing 3, isoform CRA_b [Homo sapiens]
Length = 179
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 124/168 (73%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
LRD+ R P W+E R +YF WA VV+GL+GTN +E L LF +
Sbjct: 127 LRDLNRCTPEGWSEHRVQEYFEWAAQVVKGLQGTNRQLEEALKHLFKQ 174
>gi|306440661|pdb|3NR1|A Chain A, A Metazoan Ortholog Of Spot Hydrolyzes Ppgpp And Plays A
Role In Starvation Responses
gi|306440662|pdb|3NR1|B Chain B, A Metazoan Ortholog Of Spot Hydrolyzes Ppgpp And Plays A
Role In Starvation Responses
Length = 178
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 124/168 (73%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 6 QLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 65
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 66 TDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLYN 125
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
LRD+ R P W+E R +YF WA VV+GL+GTN +E L LF +
Sbjct: 126 LRDLNRCTPEGWSEHRVQEYFEWAAQVVKGLQGTNRQLEEALKHLFKQ 173
>gi|351715556|gb|EHB18475.1| HD domain-containing protein 3 [Heterocephalus glaber]
Length = 179
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 123/168 (73%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTV
Sbjct: 5 VAQLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTV 64
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDTDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ AP SS AKLVKLADKL
Sbjct: 65 EDTDTTLDEVELHFGTQVRRLVEEVTDDKTLPKLERKRQQVEQAPRSSPGAKLVKLADKL 124
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
+NLRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 125 YNLRDLNRCTPAGWSEHRVQEYFEWAAQVVKGLQGTNQQLEEALKQLF 172
>gi|109085436|ref|XP_001093163.1| PREDICTED: HD domain-containing protein 3-like isoform 2 [Macaca
mulatta]
gi|114658939|ref|XP_001170062.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 isoform 3 [Pan troglodytes]
gi|397472459|ref|XP_003807761.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 isoform 1 [Pan paniscus]
gi|355693000|gb|EHH27603.1| HD domain-containing protein 3 [Macaca mulatta]
gi|355778309|gb|EHH63345.1| HD domain-containing protein 3 [Macaca fascicularis]
gi|410329429|gb|JAA33661.1| HD domain containing 3 [Pan troglodytes]
Length = 179
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 123/166 (74%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 127 LRDLNRCTPEGWSEHRVQEYFEWAAQVVKGLQGTNRQLEEALKHLF 172
>gi|332238736|ref|XP_003268557.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 isoform 1 [Nomascus leucogenys]
Length = 179
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 123/166 (74%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 127 LRDLNRRTPEGWSEHRVQEYFEWAAQVVKGLQGTNRQLEEALKHLF 172
>gi|402914066|ref|XP_003919456.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 [Papio anubis]
Length = 179
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 123/166 (74%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGTQVRRLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 127 LRDLNRCTPEGWSEHRVQEYFEWAAQVVKGLQGTNRQLEEALKHLF 172
>gi|426380334|ref|XP_004056828.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 isoform 1 [Gorilla gorilla gorilla]
Length = 179
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 123/166 (74%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGAQVRHLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 127 LRDLNRCTPEGWSEHRVQEYFEWAAQVVKGLQGTNRQLEEALKHLF 172
>gi|426248108|ref|XP_004017807.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 [Ovis aries]
Length = 179
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 123/168 (73%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTV
Sbjct: 5 VAQLLEAADFAARKHQRQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTV 64
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDTDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ AP SS AKLVKLADKL
Sbjct: 65 EDTDTTLDEVELHFGDQVRRLVEEVTDDKTLPKLERKRLQVEQAPQSSPGAKLVKLADKL 124
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
+NLRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 125 YNLRDLNRCTPEGWSEHRVQEYFEWAAQVVKGLQGTNRQLEEALRQLF 172
>gi|395861717|ref|XP_003803125.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 [Otolemur garnettii]
Length = 179
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 124/168 (73%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTV
Sbjct: 5 VAQLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTV 64
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDTDTT +E+E FG +VR +VEE+TD+K + + ERK+ Q+ APHSS AKLVKLADKL
Sbjct: 65 EDTDTTLDEVELHFGAQVRRLVEEVTDDKTLPKMERKQLQVEQAPHSSPGAKLVKLADKL 124
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
+NLRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 125 YNLRDLNRCTPEGWSEHRVQEYFEWAAQVVKGLQGTNRQLEEALKHLF 172
>gi|321460876|gb|EFX71914.1| hypothetical protein DAPPUDRAFT_308647 [Daphnia pulex]
Length = 181
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 122/170 (71%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
D + +++ DFA+ KH QRRKD + TPYI HPV VA ILT + + +V+ +ALLHD
Sbjct: 6 DVSIELIECVDFAAIKHRNQRRKDSDSTPYINHPVGVARILTSEAGIKDLIVLQAALLHD 65
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLAD 201
TVEDTDTTFEE+E++FG V VV E+TD+K + +ERKR QI+HAP SSHEAKLVKLAD
Sbjct: 66 TVEDTDTTFEELEKKFGKAVTDVVREVTDDKSLPSEERKRLQIVHAPTSSHEAKLVKLAD 125
Query: 202 KLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
KL+NLRD+ + P W+ R +YF W++ VV GLRG IE ELD +F
Sbjct: 126 KLYNLRDLCKGTPRGWSSRRCEEYFKWSKKVVDGLRGNCPAIEKELDKIF 175
>gi|343432648|ref|NP_001230338.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 [Sus
scrofa]
Length = 179
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 95/168 (56%), Positives = 123/168 (73%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +++A DFA+ KH QRRKDPEGTPYI HP+ VA ILT +++ VV+ +ALLHDTV
Sbjct: 5 VAQLLEAADFAARKHQRQRRKDPEGTPYINHPIGVARILTREAGITDIVVLQAALLHDTV 64
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDTDTT +E+E FG +VR +VEE+TD+K + + ERK+ Q+ APHSS AKLVKLADKL
Sbjct: 65 EDTDTTLDEVELHFGVQVRRLVEEVTDDKTLPKLERKQLQVEQAPHSSPGAKLVKLADKL 124
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
+NLRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 125 YNLRDLNRCTPEGWSERRVQEYFEWAAQVVKGLQGTNQQLEEALKQLF 172
>gi|297697471|ref|XP_002825877.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 isoform 1 [Pongo abelii]
Length = 179
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 123/166 (74%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 127 LRDLNRCTPEGWSEHRVQEYFEWAAHVVKGLQGTNRQLEEALKHLF 172
>gi|395502398|ref|XP_003755568.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Sarcophilus harrisii]
Length = 179
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 121/167 (72%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+++A DFA+ KH QRRKDPE TPYI HP+ VA ILTH +++ V+ +ALLHDTVEDT
Sbjct: 8 LLEAADFAARKHRTQRRKDPEETPYINHPIGVARILTHEAGITDIAVLQAALLHDTVEDT 67
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
+TT EE+E FG VR +V+E+TDNK + + ERKR Q+ +A SS AKLVKLADKL+NL
Sbjct: 68 NTTLEEVEEHFGAEVRRIVQEVTDNKELPKQERKRLQVENASQSSRAAKLVKLADKLYNL 127
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
RD+ R P W+E+R +YF WA VV+GL+GTN +E L LF +
Sbjct: 128 RDLNRRTPKGWSEQRVQEYFEWAAQVVKGLQGTNPQMENALQKLFQQ 174
>gi|47214467|emb|CAG12472.1| unnamed protein product [Tetraodon nigroviridis]
Length = 177
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/174 (55%), Positives = 131/174 (75%), Gaps = 1/174 (0%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
+ DA++ +++ +FA+ KH QRRKD E TPYI HP+ VA IL+H G V++ V+ +ALL
Sbjct: 2 NTDAVL-LLETVNFAAEKHRNQRRKDIEQTPYINHPIGVARILSHEGGVTDIEVLQAALL 60
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
HDT+EDTDTT E++ FGP V +V+E+TD+K + + ERKR Q+ HAPH S +AKLVKL
Sbjct: 61 HDTIEDTDTTPAELQATFGPVVARIVQEVTDDKSLPKQERKRRQVEHAPHCSPQAKLVKL 120
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
ADKL+NLRD+ R +PV WT ER +YF WA DVV+GLRGTN+ +E +LD LF +
Sbjct: 121 ADKLYNLRDLNRCIPVGWTAERVQEYFLWACDVVKGLRGTNSVLEEKLDELFKQ 174
>gi|344284348|ref|XP_003413930.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Loxodonta africana]
Length = 179
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 123/168 (73%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +++A DFA+ KH QRRKDPE TPYI HP+ VA ILTH +++ VV+ +ALLHDTV
Sbjct: 5 VAQLMEAADFAARKHRQQRRKDPEETPYINHPIGVARILTHEAGITDIVVLQAALLHDTV 64
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDTDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL
Sbjct: 65 EDTDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKL 124
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
+NLRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 125 YNLRDLNRCTPKGWSEHRVQEYFQWAVQVVRGLQGTNRQLEEALKQLF 172
>gi|348538920|ref|XP_003456938.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Oreochromis niloticus]
Length = 179
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 129/174 (74%), Gaps = 2/174 (1%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
M+S A++ ++ FA+ KH Q+RKDPE TPYI HP+ VA IL+H G V++ V+ +A
Sbjct: 1 MNSDAALL--LETVQFAAEKHRNQKRKDPEETPYINHPIGVARILSHEGGVTDIEVLQAA 58
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLV 197
LLHDTVEDTDTT E+E +FG V +V+E+TD+K + + ERKR Q+ HAPH S +AKLV
Sbjct: 59 LLHDTVEDTDTTPAELEAKFGVTVARIVQEVTDDKSLPKQERKRLQVEHAPHCSQQAKLV 118
Query: 198 KLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
KLADKL+NLRD+ R PV WT ER +YF WA +VV+GL+GTN+ +E +L+ LF
Sbjct: 119 KLADKLYNLRDLNRCTPVGWTAERVQEYFLWASEVVKGLKGTNSALEKKLEELF 172
>gi|72005452|ref|XP_784835.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Strongylocentrotus purpuratus]
Length = 179
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 123/171 (71%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
++ +V DF++ KH QRRK+ TPYI HP+ VA IL VS+ + +A+LHDTV
Sbjct: 3 LVELVDCVDFSAKKHTNQRRKNAAETPYINHPIGVARILAKEAGVSDLATLQAAILHDTV 62
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDTDTTFEEIE++FG VR +V+++TD+K + + ERKR QI HA H +AKLVKLADKL
Sbjct: 63 EDTDTTFEEIEKQFGKEVRDIVDDVTDDKSLPKMERKRRQIEHASHCCPKAKLVKLADKL 122
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKY 254
+NLRD+++ +P WT+ER +YF W VVQGLRGTN +EA LD LF K+
Sbjct: 123 YNLRDLDQEIPRGWTKERAQEYFQWGSQVVQGLRGTNKEMEASLDKLFKKH 173
>gi|157132944|ref|XP_001662714.1| hypothetical protein AaeL_AAEL012581 [Aedes aegypti]
gi|108871019|gb|EAT35244.1| AAEL012581-PA [Aedes aegypti]
Length = 240
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Query: 69 PDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKV 128
P+T S + + S + K +FA+ KH QRR D + TPYI HP+ VA ILT G +
Sbjct: 54 PETMSSSNDVSS--VLTTYTKCINFAAVKHRNQRRLDSDKTPYINHPIGVAQILTAEGDI 111
Query: 129 SNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAP 188
++ VI +A+LHDTVEDTDTTFEE+EREFG VR +VEE+TD+K + + ERKR QI HA
Sbjct: 112 TDFEVIQAAILHDTVEDTDTTFEELEREFGYAVRRLVEEVTDDKTLPKAERKRLQIEHAA 171
Query: 189 HSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELD 248
+S +AKLVKLADK++NLRD++R P WTEER YF WA+ V +GLRGTN +E LD
Sbjct: 172 GTSPQAKLVKLADKIYNLRDLQRCRPEGWTEERCRDYFTWAKRVCEGLRGTNQALEGILD 231
Query: 249 ALFAK 253
+F +
Sbjct: 232 EIFKQ 236
>gi|427782117|gb|JAA56510.1| Putative guanosine polyphosphate pyrophosphohydrolase/synthase
[Rhipicephalus pulchellus]
Length = 179
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 120/165 (72%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+++ +FA+ KH QRRKD + TPYI HP+ VA ILTH + + + +A+LHDTVEDT
Sbjct: 9 LIETVNFAAIKHRKQRRKDEDATPYINHPIGVARILTHEANIYDIATLQAAILHDTVEDT 68
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTTFEEIE+ FG +VRS+VEE+TD+K + + RK+ QI H+P S EAKLVKLADKL+NL
Sbjct: 69 DTTFEEIEQNFGSKVRSIVEEVTDDKSLPKQVRKQLQIEHSPGCSREAKLVKLADKLYNL 128
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD++R PV W+ R +YF WA VV GLRGTN P+E LD +
Sbjct: 129 RDLQRCTPVGWSPTRVQEYFEWAEKVVHGLRGTNKPMEDALDEVL 173
>gi|410912361|ref|XP_003969658.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Takifugu rubripes]
Length = 179
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 123/167 (73%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+++ FA+ KH QRRKD E TPYI HP+ VA IL+H G V + V+ +ALLHDTVEDT
Sbjct: 8 LLETVHFAAEKHRNQRRKDTEQTPYINHPIGVARILSHEGGVMDVEVLQAALLHDTVEDT 67
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DT+ EI+ FGP V +V+E+TD+K + + ERKR Q+ HAPH S +AKLVK+ADKL+NL
Sbjct: 68 DTSIAEIQATFGPVVARIVQEVTDDKSLPKQERKRQQVEHAPHCSPQAKLVKMADKLYNL 127
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
RD+ R PV WT ER +YF WA +VV+GLRGTN+ +E +LD LF +
Sbjct: 128 RDLNRCTPVGWTAERVQEYFLWACEVVKGLRGTNSVLEEKLDELFKQ 174
>gi|443710434|gb|ELU04687.1| hypothetical protein CAPTEDRAFT_222957 [Capitella teleta]
Length = 181
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 122/165 (73%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+++ +FA+ KH QRRKD E TPYI HP+ VA+ILT V + +VI +ALLHDTVEDT
Sbjct: 9 LMRCMNFAAVKHKNQRRKDAEATPYINHPIGVANILTEEAGVDDVIVIQAALLHDTVEDT 68
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
+TT +EI FG V +V E+TD+K++ + ERKR QILHAPH+S +AKLVKLADKL+NL
Sbjct: 69 NTTIDEIVEHFGHNVAGIVAEMTDDKNLAKAERKRQQILHAPHASPKAKLVKLADKLYNL 128
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD++R P W+E+R +YF WA VV GLRG+N +E +LD LF
Sbjct: 129 RDLQRCTPCGWSEDRVQEYFVWAHQVVAGLRGSNRQLENKLDDLF 173
>gi|444722118|gb|ELW62821.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
[Tupaia chinensis]
Length = 199
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 124/186 (66%), Gaps = 20/186 (10%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLLEAADFAARKHRLQRRKDPEGTPYINHPIGVARILTHEAGITDTVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGTQVRRLVEEVTDDKTLPKLERKRLQVERAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLP--------------------VNWTEERKTQYFNWARDVVQGLRGTNAPIEA 245
LRD+ R P W+E+R +YF WA VV+GL+GTN +E
Sbjct: 127 LRDLNRCAPEGTLPHRLYGQGEGCPCFEDTGWSEQRVQEYFEWAAQVVKGLQGTNQQLEE 186
Query: 246 ELDALF 251
L LF
Sbjct: 187 ALKQLF 192
>gi|66530341|ref|XP_624961.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Apis mellifera]
Length = 220
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/175 (50%), Positives = 130/175 (74%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+++ + + ++K +FA+ KH QRRKD + TPYI H + VA+IL GK+ +PVVI++A
Sbjct: 28 LNTAELLSIVMKCVNFAAIKHKDQRRKDEKETPYINHLIGVANILVQEGKIYDPVVIVAA 87
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLV 197
LLHD VEDT+TTFEEIE EFG V ++++ELTD+K + + ERKR QI +A + SH+AKL+
Sbjct: 88 LLHDIVEDTNTTFEEIENEFGTEVCNIIKELTDDKSLHKAERKRLQIQNACNKSHKAKLI 147
Query: 198 KLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFA 252
LADKL+NLRD++ ++PV W+++R +YF WA+ V+ R TN +E ELD +FA
Sbjct: 148 ILADKLYNLRDLQENIPVGWSQDRVKEYFKWAKSVIDKCRKTNFNLERELDLIFA 202
>gi|291240409|ref|XP_002740112.1| PREDICTED: HD domain containing 3-like [Saccoglossus kowalevskii]
Length = 188
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 122/170 (71%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
D + +V+ FA+ KH QRRKDP TPYI HP+ VA IL+ + N ++ +ALLHD
Sbjct: 8 DDLQALVECMHFAAIKHTDQRRKDPMKTPYINHPIGVARILSKEAGIKNLHILQAALLHD 67
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLAD 201
TVEDTDT+F+EIE++FG VR +V E+TD+K + + ERKR QI HAPH S EAKLVKLAD
Sbjct: 68 TVEDTDTSFDEIEKQFGAEVRHIVAEVTDDKSLPKMERKRKQIEHAPHISREAKLVKLAD 127
Query: 202 KLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
KL+NLRD++R P +WT ER YF+WA VV GLRGTN +E LD +F
Sbjct: 128 KLYNLRDLKRVAPESWTPERVQDYFHWAAKVVAGLRGTNKTMEDSLDKIF 177
>gi|209737138|gb|ACI69438.1| HD domain-containing protein 3 [Salmo salar]
Length = 179
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 123/167 (73%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+++ +FA+ KH +QRRKD E TPYI HP+ VA IL+H G +++ V+ +ALLHDTVEDT
Sbjct: 8 LLETVNFAAEKHRYQRRKDAEQTPYINHPIGVARILSHEGGITDIEVLQAALLHDTVEDT 67
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DT+ E++ FG V +V+E+TD+K + + ERKR Q+ HAPH+SH+AKLVKLADKL+NL
Sbjct: 68 DTSIGELQAIFGQTVARIVQEVTDDKALPKQERKRQQVEHAPHASHQAKLVKLADKLYNL 127
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
RD+ R P W+ ER +YF W+ VV+GLRGTN +E L+ LF +
Sbjct: 128 RDLNRCTPTGWSAERVQEYFVWSAQVVRGLRGTNPALERHLEELFKQ 174
>gi|195112376|ref|XP_002000750.1| GI22351 [Drosophila mojavensis]
gi|193917344|gb|EDW16211.1| GI22351 [Drosophila mojavensis]
Length = 169
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 90/166 (54%), Positives = 124/166 (74%), Gaps = 1/166 (0%)
Query: 88 VKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTD 147
+KA FA++KH QRRKDP+ TPY+ H + VA IL G + + V+I+A+LHD VEDTD
Sbjct: 1 MKALQFAAYKHSKQRRKDPDSTPYVNHLINVATILAEAG-IKDEGVLIAAILHDVVEDTD 59
Query: 148 TTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLR 207
TT +E+E+ FG V S+V E+TD+K + +DERKR QI++A +++ AKL+KLADKL NLR
Sbjct: 60 TTIQEVEQLFGTDVSSLVLEVTDDKSLEKDERKRLQIVNARNTTKRAKLIKLADKLDNLR 119
Query: 208 DIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
D+ ++ P WTEER+ QYF WA+ VV LRGTNA +E +LD +FA+
Sbjct: 120 DLRKTTPCGWTEERRDQYFEWAKLVVDNLRGTNAMMEEKLDQIFAE 165
>gi|118786213|ref|XP_315226.3| AGAP004597-PA [Anopheles gambiae str. PEST]
gi|116127591|gb|EAA10591.3| AGAP004597-PA [Anopheles gambiae str. PEST]
Length = 183
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/164 (55%), Positives = 121/164 (73%), Gaps = 1/164 (0%)
Query: 88 VKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTD 147
K +FA+ KH QRR D + TPYI HP+ VA+ILT G +++ V+ +A+LHDTVEDTD
Sbjct: 15 TKCINFAAIKHRNQRRLDSDETPYINHPIGVAYILTEAG-ITDLEVLQAAILHDTVEDTD 73
Query: 148 TTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLR 207
T+FEEIE FGP VR++V+E+TD+K + + ERKR QI HA SH+AKLVKLADK++NLR
Sbjct: 74 TSFEEIESLFGPTVRAIVQEVTDDKSLPKQERKRLQIEHASKKSHQAKLVKLADKIYNLR 133
Query: 208 DIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
D++R P NWT ER +YF WA+ V L+GTN +E+ LD +F
Sbjct: 134 DLQRCKPKNWTNERCREYFTWAKQVCDNLKGTNESLESILDDIF 177
>gi|209733606|gb|ACI67672.1| HD domain-containing protein 3 [Salmo salar]
Length = 179
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 125/176 (71%), Gaps = 2/176 (1%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
M S I+ ++ +FA+ KH +QRRKD E TPYI HP+ VA IL+H G +++ V+ +A
Sbjct: 1 MSSESVIL--LETVNFAAEKHRYQRRKDAEQTPYINHPIGVARILSHEGGITDIEVLQAA 58
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLV 197
LLHDTVEDTDT+ E++ FG V +V+E+TD+K + + ERKR Q+ HAPH+S +AKLV
Sbjct: 59 LLHDTVEDTDTSIGELQAIFGQTVARIVQEVTDDKALPKQERKRQQVEHAPHASQQAKLV 118
Query: 198 KLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
KLADKL+NLRD+ R P W+ ER +YF W+ VV+GLRGTN +E L+ LF +
Sbjct: 119 KLADKLYNLRDLNRCTPTGWSAERVQEYFVWSAQVVRGLRGTNPALERHLEELFKQ 174
>gi|380020892|ref|XP_003694310.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Apis florea]
Length = 220
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/166 (53%), Positives = 125/166 (75%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+++ +FA+ KH QRRKD + TPYI HP+ VA+IL GK+ +PVVI++ALLHD VEDT
Sbjct: 37 VMRCVNFAAIKHKDQRRKDEKETPYINHPIGVANILVQEGKIYDPVVIVAALLHDIVEDT 96
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
+TTFEEIE EFG V ++V+E+TD+K++ + ERKR QI +A S +AKL+ LADKL+NL
Sbjct: 97 NTTFEEIENEFGTEVCNIVKEITDDKNLHKAERKRLQIENANKRSQKAKLIILADKLYNL 156
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFA 252
RD++ ++PV W+++R +YF WA+ V+ R TN +E ELD +FA
Sbjct: 157 RDLKENVPVGWSQDRVKEYFKWAKSVIDRCRKTNFILERELDLIFA 202
>gi|326436105|gb|EGD81675.1| HD domain-containing protein 3 [Salpingoeca sp. ATCC 50818]
Length = 200
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 120/165 (72%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+++ FA+H H QRRKDPEGTPYI HP+ VA ++ ++G + VV+ +ALLHDTVEDT
Sbjct: 6 LLRTASFAAHAHRKQRRKDPEGTPYINHPIGVADLIANVGGEDDIVVLQAALLHDTVEDT 65
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
D T E+++ EFGP V VV E++D+K + + ERK QI HA +S KLVKLADKL+NL
Sbjct: 66 DVTLEQLKDEFGPEVAQVVAEVSDDKGLNKHERKLQQIEHAASASRRGKLVKLADKLYNL 125
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD++R LP +W+ +R YF W+R+V+ +RGTNA +E ELD LF
Sbjct: 126 RDLKRQLPKHWSVKRAQAYFGWSREVINQVRGTNAALERELDKLF 170
>gi|432951694|ref|XP_004084889.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Oryzias latipes]
Length = 179
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 94/174 (54%), Positives = 126/174 (72%), Gaps = 2/174 (1%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
M+S I+ ++ +FA+ KH QRRKDPE TPYI HP+ VA IL+H G V++ V+ +A
Sbjct: 1 MNSEAGIL--IETVNFAADKHRKQRRKDPEETPYINHPIGVARILSHEGGVTDVEVLQAA 58
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLV 197
LLHDTVEDTDTT E+E +FGP V +V+E+TD+K + + ERKR Q+ HA S +AKLV
Sbjct: 59 LLHDTVEDTDTTPTELEAKFGPVVARIVQEVTDDKSLPKRERKRVQVEHAAQCSRQAKLV 118
Query: 198 KLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
KLADKL+NLRD+ R PV W+ ER +YF WA +VV+ L+GTN+ +E +L LF
Sbjct: 119 KLADKLYNLRDLNRCTPVGWSSERVHEYFVWASEVVRNLKGTNSVLEEKLAELF 172
>gi|318037291|ref|NP_001187852.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
[Ictalurus punctatus]
gi|308324146|gb|ADO29208.1| hd domain-containing protein 3 [Ictalurus punctatus]
Length = 179
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/165 (55%), Positives = 120/165 (72%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+++ +FA+ KH QRRKDP+ TPYI HP+ VA IL+H G V++ V+ +A+LHDTVEDT
Sbjct: 8 LLETINFAAEKHRNQRRKDPDATPYINHPIGVARILSHEGGVTDIEVLQAAVLHDTVEDT 67
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTTFEE+E FG +V +V+E+TD+K + + ERK Q+ HA H SH+AKLVKLADKL+NL
Sbjct: 68 DTTFEELEAMFGNKVAKIVQEVTDDKTLPKQERKLQQVEHALHCSHQAKLVKLADKLYNL 127
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD+ R P WT R +YF WA VV+ LRGTN +E +L LF
Sbjct: 128 RDLNRCTPEGWTAVRAQEYFVWAAQVVKRLRGTNTALEEKLLQLF 172
>gi|170043459|ref|XP_001849404.1| HD domain-containing protein 3 [Culex quinquefasciatus]
gi|167866800|gb|EDS30183.1| HD domain-containing protein 3 [Culex quinquefasciatus]
Length = 183
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 120/176 (68%)
Query: 76 SGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
S P + +FA+ KH QRR D + TPYI HP+ VAHILT G V++ VI
Sbjct: 2 SSKDVPTVLQIYTNCVNFAAVKHRNQRRLDSDKTPYINHPIGVAHILTAEGGVTDFEVIQ 61
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAK 195
+A+LHDTVEDTDT+FEEIE+ FG RVR +V E+TD+K + + ERKR QI HA S +AK
Sbjct: 62 AAILHDTVEDTDTSFEEIEQNFGLRVRQIVAEVTDDKSLAKAERKRLQIEHAAVVSPQAK 121
Query: 196 LVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LVKLADK++NLRD++R P WTEER +YF WA+ V L+GTN +E LD +F
Sbjct: 122 LVKLADKIYNLRDLQRCKPEGWTEERCREYFAWAKKVCDNLKGTNRALEDILDEIF 177
>gi|313215292|emb|CBY42918.1| unnamed protein product [Oikopleura dioica]
Length = 216
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 119/177 (67%), Gaps = 4/177 (2%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAV----AHILTHLGKVSNPVVI 134
S + + +VKA DFA+ KH RRKD + TPYI HP+A A G V++ ++
Sbjct: 35 QSMNVLAKLVKAADFAAKKHRNDRRKDADKTPYINHPIACPVCRAQFKAEEGDVNDVDIL 94
Query: 135 ISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEA 194
+ALLHDTVEDTDT+FEEIE FG VR V+E+TD+K + + ERKR QI++AP + A
Sbjct: 95 CAALLHDTVEDTDTSFEEIEELFGKVVRDYVDEVTDDKTLEKMERKRLQIVNAPKKTPGA 154
Query: 195 KLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
K VKLADKL+NLRD+ R P W E R YF WA+ VV GLRG NA +E+ELDALF
Sbjct: 155 KQVKLADKLYNLRDLNRCTPEGWDEVRVENYFKWAKQVVDGLRGANAALESELDALF 211
>gi|241613924|ref|XP_002407466.1| guanosine polyphosphate pyrophosphohydrolase/synthase, putative
[Ixodes scapularis]
gi|215502815|gb|EEC12309.1| guanosine polyphosphate pyrophosphohydrolase/synthase, putative
[Ixodes scapularis]
Length = 191
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 120/165 (72%), Gaps = 1/165 (0%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+++ +FA+ KH Q+R D TPYI HP+ VA ILTH + + + I +A+LHDTVEDT
Sbjct: 14 LIETVNFAAVKHRDQQRDDGH-TPYINHPIGVARILTHEAGIYDLMTIQAAILHDTVEDT 72
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTT EEIE+ FG RVR++V+E+TD+K + + RKR QI HAPH SHEAKLVKLADKL+NL
Sbjct: 73 DTTPEEIEKHFGSRVRAIVDEVTDDKRLPSEVRKRLQIEHAPHCSHEAKLVKLADKLYNL 132
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD+ + P+ W E+R YF W+ VV GLRGTN P+E LD +F
Sbjct: 133 RDLSTTTPLGWNEQRVQAYFEWSEKVVFGLRGTNKPMELALDQVF 177
>gi|327292042|ref|XP_003230729.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Anolis carolinensis]
Length = 181
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 76 SGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
SGM + ++ A FA+ KH QRRKDPE TPYI HP+ VA IL G +++ V+
Sbjct: 2 SGMSEA---VQLLDAAHFAACKHSSQRRKDPECTPYINHPIGVAQILAQEGGITDLAVLQ 58
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAK 195
+ALLHDTVEDT+TTF EIE FG VR +VEE+TD+K + R ERKR QI HA +S A+
Sbjct: 59 AALLHDTVEDTETTFSEIEERFGTEVRRMVEEVTDDKALPRMERKRLQIEHAAGASPGAR 118
Query: 196 LVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYC 255
L+KLADKL+NLRD+ R P W+E+R YF WA +VV+GLRGT+ +E +L LF +
Sbjct: 119 LIKLADKLYNLRDLNRCTPQGWSEKRVQDYFLWASEVVKGLRGTHPALEEKLWLLFRERG 178
Query: 256 TP 257
P
Sbjct: 179 IP 180
>gi|373486233|ref|ZP_09576909.1| metal-dependent phosphohydrolase HD sub domain protein [Holophaga
foetida DSM 6591]
gi|372012138|gb|EHP12716.1| metal-dependent phosphohydrolase HD sub domain protein [Holophaga
foetida DSM 6591]
Length = 184
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/175 (50%), Positives = 123/175 (70%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
++P + + FA+ KH QRRKD E +PYI HP+A+A++LT+ G V V+ +A+
Sbjct: 5 NAPGIAGELFRVLAFAADKHRNQRRKDAEASPYINHPIALANLLTNEGGVEELEVLCAAV 64
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVK 198
LHDT+EDT TT EE+E+ FGPR+ S+V E+TD+K + + RK+ Q+ HAPH S EAKLVK
Sbjct: 65 LHDTIEDTQTTPEELEQVFGPRIASIVLEVTDDKSLEKHVRKQLQVEHAPHCSREAKLVK 124
Query: 199 LADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
LADK+ NLRD+ S P W+ ERK YF+WA VV GLRGT+ +EA D ++A+
Sbjct: 125 LADKICNLRDMLASAPAGWSIERKLDYFDWAARVVAGLRGTHGGLEAMFDEVYAR 179
>gi|195399980|ref|XP_002058597.1| GJ14232 [Drosophila virilis]
gi|194142157|gb|EDW58565.1| GJ14232 [Drosophila virilis]
Length = 175
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 123/171 (71%), Gaps = 1/171 (0%)
Query: 83 AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDT 142
A ++ +K+ FA+ KH QRRKDP+ TPY+ H + V+ IL G + + V+++A+LHD
Sbjct: 2 ASLDFLKSLQFAAQKHSKQRRKDPDSTPYVNHLINVSTILAEAG-IRDEGVLMAAVLHDV 60
Query: 143 VEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADK 202
VEDTDTTF ++E FG V S+V ELTD+K + ++ERKR QI +A S+ A+ +KLADK
Sbjct: 61 VEDTDTTFVDLEDLFGVDVSSLVRELTDDKTLAKEERKRLQIENAARSTRRARFIKLADK 120
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
L NLRD++ + P WTEER+ +YF WA+ VV +RGTNA +EA+LD +FAK
Sbjct: 121 LDNLRDLQINKPRGWTEERREEYFVWAKQVVDNMRGTNAKLEAQLDEIFAK 171
>gi|340368508|ref|XP_003382793.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Amphimedon queenslandica]
Length = 193
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 121/170 (71%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +++A +FA+ KH QRRKD + TPYI HP+ VA+ L G V++ + A+LHDTV
Sbjct: 6 LGQLLEAINFAAIKHSKQRRKDEDKTPYINHPIGVAYSLWKEGGVTDLATLQGAILHDTV 65
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDTDTT +EIE +FGP VRS+V+E++D+K + + ERKR Q+++AP S +AKL+KLADKL
Sbjct: 66 EDTDTTLDEIEEKFGPEVRSIVDEVSDDKSLPKAERKRLQVINAPRKSKQAKLIKLADKL 125
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
+NLRD+ R+ P WTE R +Y+ W V++G+ GTN +E ++ + K
Sbjct: 126 YNLRDLSRATPQGWTESRVQEYYQWGAQVIRGILGTNKDLEDAIEEVLRK 175
>gi|413961907|ref|ZP_11401135.1| metal dependent phosphohydrolase [Burkholderia sp. SJ98]
gi|413930779|gb|EKS70066.1| metal dependent phosphohydrolase [Burkholderia sp. SJ98]
Length = 179
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 124/170 (72%), Gaps = 1/170 (0%)
Query: 85 MN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN ++ A FA+ KH QRRKD + +PYI HP+A+AH+L + G V + V+I+A+LHDT+
Sbjct: 1 MNQLIHAVAFAADKHRKQRRKDADASPYINHPIALAHVLANEGGVEDERVLIAAILHDTI 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDTDT+ +E+ R FG + +V+E+TD+K +++ ERKR Q+ HA H SH AKLVKLADK+
Sbjct: 61 EDTDTSRDELVRRFGAEIGRIVDEVTDDKSLSKAERKRLQVEHAAHISHGAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
NLRDI + P W++ERK +YF+WA+ VV LRGT+ +EA D ++ K
Sbjct: 121 CNLRDILAAPPSGWSDERKREYFDWAKRVVDELRGTHRELEAVFDEVYRK 170
>gi|328769899|gb|EGF79942.1| hypothetical protein BATDEDRAFT_89127 [Batrachochytrium
dendrobatidis JAM81]
Length = 187
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 120/171 (70%)
Query: 83 AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDT 142
++ +++ +FA+ KH QRRKDP TPYI HP+ VA+IL + G V + +++A+LHDT
Sbjct: 10 SLGQLLECINFAAIKHSSQRRKDPTKTPYINHPIGVAYILYYEGNVEDLPTLLAAVLHDT 69
Query: 143 VEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADK 202
VEDT+T+FEEI +FG V +V TD+K + +RKR Q+ APH S +AKLVK+ADK
Sbjct: 70 VEDTETSFEEITAKFGSEVCEIVMACTDDKTLPSKDRKRLQVETAPHKSDKAKLVKMADK 129
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
++NLRD+ R LP+ WT++R +YF WA+ V G RG NA ++A L+ ++ K
Sbjct: 130 IYNLRDLMRVLPMGWTQQRANEYFAWAKQVTDGCRGVNAKLDAILNDIYKK 180
>gi|186474002|ref|YP_001861344.1| metal dependent phosphohydrolase [Burkholderia phymatum STM815]
gi|184196334|gb|ACC74298.1| metal dependent phosphohydrolase [Burkholderia phymatum STM815]
Length = 178
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 121/169 (71%), Gaps = 1/169 (0%)
Query: 85 MNI-VKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN+ ++AT FA++KH QRRKD + +PYI HP+A+A +L + G V++ V+++A+LHDT+
Sbjct: 1 MNVLIRATAFAANKHRNQRRKDADASPYINHPIALADVLANEGDVADEAVLVAAILHDTI 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+T+ EE+ FG V +V E+TD+K + + ERKR QI HAP S A+LVKLADK+
Sbjct: 61 EDTETSMEELVALFGHAVAEIVAEVTDDKTLPKAERKRRQIEHAPAISRNAQLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFA 252
NLRDI P NWT ERK +YF WA+ VV GLRG + +EA D+ +A
Sbjct: 121 CNLRDIAACPPANWTGERKREYFEWAKAVVDGLRGVHPVLEAAFDSAYA 169
>gi|268570278|ref|XP_002640736.1| Hypothetical protein CBG19806 [Caenorhabditis briggsae]
Length = 229
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 118/169 (69%), Gaps = 1/169 (0%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++KA DFA+ +H Q+RKD TPYI HP+ V +ILT+ KV +PV + A+LHD VEDT
Sbjct: 61 VMKAADFAARRHRHQKRKD-NATPYINHPIGVMYILTNEAKVYDPVTLAGAVLHDVVEDT 119
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
TT EEI++EFG V VV+E TD+K + + ERK+ QI + SH AKLV LADKL+NL
Sbjct: 120 KTTLEEIQKEFGDEVLEVVKECTDDKGLAKQERKKLQIENYGKHSHRAKLVHLADKLYNL 179
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYC 255
RD+ER P+ W ++R T+YF WAR+V+ ++GTN +E LD + ++
Sbjct: 180 RDLERKAPIGWDKKRVTEYFKWAREVIGQMKGTNESLEYALDDVINRHL 228
>gi|195061890|ref|XP_001996092.1| GH14007 [Drosophila grimshawi]
gi|193891884|gb|EDV90750.1| GH14007 [Drosophila grimshawi]
Length = 175
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 120/171 (70%), Gaps = 1/171 (0%)
Query: 83 AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDT 142
A ++ +K+ FA+ KH QRRKDPEGTPY+ H + V L G + + V+++ALLHD
Sbjct: 2 ASLDFMKSLQFAAQKHSKQRRKDPEGTPYVNHVINVCTNLVEAG-IEDEAVLMAALLHDV 60
Query: 143 VEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADK 202
VEDTDTT ++E+ FG V S+V E+TD+K + + ERKR QI++A S+ A L+KLADK
Sbjct: 61 VEDTDTTVGDVEQLFGTDVASLVHEVTDDKSLEKAERKRLQIVNAARSTRRANLIKLADK 120
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
L NLRD++ + P WTEER+ +YF WA+ VV LRGTN +E ELD +F++
Sbjct: 121 LDNLRDLQINTPHGWTEERREEYFVWAKQVVDNLRGTNEQLERELDEIFSQ 171
>gi|24650996|ref|NP_651682.1| metazoan SpoT homolog-1 [Drosophila melanogaster]
gi|74868038|sp|Q9VAM9.1|MESH1_DROME RecName: Full=Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase MESH1; AltName: Full=Metazoan
SpoT homolog 1; Short=Mesh1; AltName:
Full=Penta-phosphate guanosine-3'-pyrophosphohydrolase;
Short=(ppGpp)ase
gi|306440659|pdb|3NQW|A Chain A, A Metazoan Ortholog Of Spot Hydrolyzes Ppgpp And Plays A
Role In Starvation Responses
gi|306440660|pdb|3NQW|B Chain B, A Metazoan Ortholog Of Spot Hydrolyzes Ppgpp And Plays A
Role In Starvation Responses
gi|7301763|gb|AAF56875.1| metazoan SpoT homolog-1 [Drosophila melanogaster]
gi|85857806|gb|ABC86437.1| IP06614p [Drosophila melanogaster]
gi|220952280|gb|ACL88683.1| CG11900-PA [synthetic construct]
gi|220958838|gb|ACL91962.1| CG11900-PA [synthetic construct]
Length = 179
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 118/165 (71%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++ +A+ KH QRRKDP+ TPY+ H + V+ IL+ +++ V+++ALLHD VEDT
Sbjct: 9 FMECLQYAAFKHRQQRRKDPQETPYVNHVINVSTILSVEACITDEGVLMAALLHDVVEDT 68
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
D +FE++E+ FGP V +V E+TD+K + + ERKR QI +A SS AKL+KLADKL NL
Sbjct: 69 DASFEDVEKLFGPDVCGLVREVTDDKSLEKQERKRLQIENAAKSSCRAKLIKLADKLDNL 128
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD++ + P WT+ER+ QYF WA+ VV LRGTNA +E +LD +F
Sbjct: 129 RDLQVNTPTGWTQERRDQYFVWAKKVVDNLRGTNANLELKLDEIF 173
>gi|195574693|ref|XP_002105319.1| GD17928 [Drosophila simulans]
gi|194201246|gb|EDX14822.1| GD17928 [Drosophila simulans]
Length = 179
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 118/165 (71%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++ +A+ KH QRRKDP+ TPY+ H + V+ IL+ +++ V+++ALLHD VEDT
Sbjct: 9 FMECLQYAAFKHRQQRRKDPQETPYVNHVINVSTILSVEACITDEGVLMAALLHDVVEDT 68
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
D +FE++E+ FGP V +V E+TD+K + + ERKR QI +A SS AKL+KLADKL NL
Sbjct: 69 DASFEDVEKLFGPDVCGLVREVTDDKSLEKQERKRLQIENAAKSSCRAKLIKLADKLDNL 128
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD++ + P WT+ER+ QYF WA+ VV LRGTNA +E +LD +F
Sbjct: 129 RDLQVNTPTGWTQERREQYFIWAKKVVDNLRGTNANLELKLDEIF 173
>gi|324518519|gb|ADY47127.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
[Ascaris suum]
Length = 226
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 114/167 (68%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
IVKA+DFA+ KH QRRKD + TPYI HP+ VA+ILT+ KV +P I +A+LHDTVEDT
Sbjct: 54 IVKASDFAARKHRHQRRKDRQQTPYINHPIGVAYILTNEAKVCDPSTIAAAILHDTVEDT 113
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTT +EI FG + +V E D+K R+ RK+ QI +A SH+AKLV LADKL+NL
Sbjct: 114 DTTLDEIREIFGQEIHDIVAECCDDKTQPREVRKQAQIDNASKHSHKAKLVHLADKLYNL 173
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
RD+ER PV W R +YF W++ VV L+GTN +E LD + +
Sbjct: 174 RDLERGTPVGWDGNRVREYFVWSKAVVTQLKGTNEALELALDEIIER 220
>gi|402593127|gb|EJW87054.1| HD domain-containing protein [Wuchereria bancrofti]
Length = 176
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 114/168 (67%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+VKA +FA+ +H QRRKD TPYI HP+ VAHIL+ V++ I +ALLHDTVEDT
Sbjct: 6 VVKACNFAAERHRLQRRKDALQTPYINHPIGVAHILSSEVGVTDSATIAAALLHDTVEDT 65
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
TTF+EI FG + +V+E TD+K + RK+ QI +A SH+AKL+ LADKLHNL
Sbjct: 66 STTFQEISSLFGEEISQIVQECTDDKSLPASVRKQLQIENAVKHSHKAKLIHLADKLHNL 125
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKY 254
RD+ER PV W+ +R +YF W++ +V L+GTN +E LD + +Y
Sbjct: 126 RDLERETPVGWSAQRVKEYFIWSKAIVSELKGTNEALEVALDDVINRY 173
>gi|312065480|ref|XP_003135811.1| hypothetical protein LOAG_00223 [Loa loa]
gi|307769032|gb|EFO28266.1| hypothetical protein LOAG_00223 [Loa loa]
Length = 177
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 115/171 (67%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
I ++KA +FA+ +H QRRKD TPYI HP+ VA+IL V++ I +ALLHDTV
Sbjct: 3 ICIVIKACNFAAERHRLQRRKDVSQTPYINHPIGVANILISEAGVTDSATIAAALLHDTV 62
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT TTF+EI FG + +V+E TD+K + RK+ Q+ +A SH+AKLV LADKL
Sbjct: 63 EDTATTFQEISGLFGEEISRIVQECTDDKSLPVSVRKQLQVKNAARHSHKAKLVHLADKL 122
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKY 254
+NLRD+ER+ PV W +R +YF W++ VV L+GTNA +E LD + +Y
Sbjct: 123 YNLRDLERATPVGWDAQRVKEYFTWSKAVVSELKGTNAALEIALDDIINRY 173
>gi|195341151|ref|XP_002037175.1| GM12255 [Drosophila sechellia]
gi|194131291|gb|EDW53334.1| GM12255 [Drosophila sechellia]
Length = 179
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 117/165 (70%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++ +A+ KH QRRKDP TPY+ H + V+ IL+ +++ V+++ALLHD VEDT
Sbjct: 9 FMECLQYAAFKHRQQRRKDPLETPYVNHVINVSTILSVEACITDEGVLMAALLHDVVEDT 68
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
D +FE++E+ FGP V +V E+TD+K + + ERKR QI +A SS AKL+KLADKL NL
Sbjct: 69 DASFEDVEKLFGPDVCGLVREVTDDKSLEKQERKRLQIKNAAKSSCRAKLIKLADKLDNL 128
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD++ + P WTEER+ QYF WA+ VV LRGTNA +E +LD +F
Sbjct: 129 RDLQVNTPTGWTEERREQYFIWAKMVVDNLRGTNANLELKLDEIF 173
>gi|25143118|ref|NP_493608.2| Protein ZK909.3 [Caenorhabditis elegans]
gi|20338978|emb|CAB05030.2| Protein ZK909.3 [Caenorhabditis elegans]
Length = 229
Score = 176 bits (447), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 121/169 (71%), Gaps = 1/169 (0%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++KATDFA+ +H Q+RKD TPYI HP+ V +ILT+ KV +PV + +A+LHD VEDT
Sbjct: 61 VLKATDFAARRHRHQKRKD-NATPYINHPIGVMYILTNEAKVYDPVTLAAAVLHDVVEDT 119
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
TT EEI++EFG V VV+E TD+K++ + ERK+ QI + SH+AKLV LADKL+NL
Sbjct: 120 KTTPEEIQQEFGNEVFQVVKECTDDKNLAKAERKKLQIENYGKHSHQAKLVHLADKLYNL 179
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYC 255
RD+ER P+ W ++R +YF W+R+V+ ++GTN +E LD + ++
Sbjct: 180 RDLERKAPIGWDKKRVNEYFKWSREVIGEMKGTNESLEYALDDVINRHL 228
>gi|195503342|ref|XP_002098611.1| GE10467 [Drosophila yakuba]
gi|194184712|gb|EDW98323.1| GE10467 [Drosophila yakuba]
Length = 179
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 115/165 (69%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++ +AS KH QRRKDP+ TPY+ H + V+ IL+ +++ V+++ALLHD VEDT
Sbjct: 9 FMECLQYASFKHRQQRRKDPQNTPYVNHVINVSTILSVEACITDEAVLMTALLHDVVEDT 68
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
D +FE++E+ FG V +V E+TD+K + + ERKR QI +A SS AKL+KLADKL NL
Sbjct: 69 DASFEDVEKLFGADVCGLVREVTDDKSLEKQERKRLQIENAAKSSCRAKLIKLADKLDNL 128
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD++ + P WT ER+ QYF WA VV LRGTNA +E +LD +F
Sbjct: 129 RDLQVNTPTGWTPERREQYFIWAMKVVDNLRGTNANLELKLDEIF 173
>gi|430761368|ref|YP_007217225.1| Metal dependent phosphohydrolase [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430010992|gb|AGA33744.1| Metal dependent phosphohydrolase [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 174
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 114/154 (74%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I++A FA+HKH QRRKD + +PYI HP+A+A IL + V++P V+ +A+LHDT+EDT
Sbjct: 6 ILRALAFAAHKHRDQRRKDADASPYINHPIALADILANEAGVTDPAVLCAAILHDTIEDT 65
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
+TT EE+E FGP + ++V E+TD+K + +D+RK+ Q+ HA H+S AKLVKLADK+ NL
Sbjct: 66 ETTLEELEDAFGPEIATIVAEVTDDKTLPKDQRKQLQVEHAAHASPRAKLVKLADKIANL 125
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTN 240
RDI + P +W+ ERK +YF+WAR VV R +
Sbjct: 126 RDIAATPPADWSTERKREYFDWARQVVDRTRDAS 159
>gi|431930328|ref|YP_007243374.1| hypothetical protein Thimo_0914 [Thioflavicoccus mobilis 8321]
gi|431828631|gb|AGA89744.1| hypothetical protein Thimo_0914 [Thioflavicoccus mobilis 8321]
Length = 183
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 117/172 (68%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
+ + V+A FA+ KH QRRKD +PYI HP+A+A +L + G V + V+ +A+LHD
Sbjct: 7 EGMSQFVRALAFAAEKHRGQRRKDVAASPYINHPIALADVLVNEGGVFDATVLCAAVLHD 66
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLAD 201
T+EDT+TT +E+ R FG R+ +V E+TD+K + +DERK Q+ HAP+ S EAKLVKLAD
Sbjct: 67 TIEDTETTPDELARHFGERIAGIVMEVTDDKALPKDERKTRQVTHAPYLSSEAKLVKLAD 126
Query: 202 KLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
K+ NLRDI + P W+ RK YF+WA V+ G+RG + +E+ D L A+
Sbjct: 127 KICNLRDILAAPPAGWSGARKRAYFDWAAQVIAGVRGAHPGLESLFDGLLAR 178
>gi|260820477|ref|XP_002605561.1| hypothetical protein BRAFLDRAFT_101015 [Branchiostoma floridae]
gi|229290895|gb|EEN61571.1| hypothetical protein BRAFLDRAFT_101015 [Branchiostoma floridae]
Length = 186
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/166 (57%), Positives = 124/166 (74%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++ +FA+ KH QRRKDP+ TPYI HP+ VA+IL G +++ V+ ALLHDTVED
Sbjct: 12 QLIECMNFAAVKHRNQRRKDPDKTPYINHPIGVAYILMKEGGITDVQVLQGALLHDTVED 71
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
T+TTFEEIE FG VR +V E+TD+K + + ERKR Q+++AP SH+AKLVKLADKL+N
Sbjct: 72 TETTFEEIEELFGSEVRGIVAEVTDDKTLPKMERKRLQVVNAPKKSHKAKLVKLADKLYN 131
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LRD+ER+ P WT ER +YF WA VV+GLRGTN +E +LD LF
Sbjct: 132 LRDLERATPEGWTAERVMEYFRWAAQVVEGLRGTNQALENKLDELF 177
>gi|386829549|ref|ZP_10116656.1| guanosine polyphosphate synthetase/pyrophosphohydrolase [Beggiatoa
alba B18LD]
gi|386430433|gb|EIJ44261.1| guanosine polyphosphate synthetase/pyrophosphohydrolase [Beggiatoa
alba B18LD]
Length = 196
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 119/174 (68%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S + + ++KA F++ KH QRR+D + +PYI HP+ VA +L +GKV + VII+ALL
Sbjct: 9 SAEEVAQLLKALRFSADKHRDQRRRDKQVSPYINHPIQVATLLWEVGKVYDIAVIIAALL 68
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
HDT+EDT+T +EI+ FG V ++V+E+TD+K + + ERKR Q+ APH SH AKLVKL
Sbjct: 69 HDTLEDTNTQADEIQNLFGLTVLNIVQEVTDDKSLEKAERKRLQVERAPHKSHSAKLVKL 128
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
ADK+ N+RDI + P W+ R +Y W+ V+QG+RG N +EAE D L +
Sbjct: 129 ADKICNVRDILYTPPQTWSVTRCLEYVQWSEQVIQGIRGVNPILEAEFDQLVQQ 182
>gi|194744459|ref|XP_001954711.1| GF18409 [Drosophila ananassae]
gi|190627748|gb|EDV43272.1| GF18409 [Drosophila ananassae]
Length = 179
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 115/165 (69%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++ +A+ KH QRRKDP+ TPY+ H + V+ IL+ +++ V+++ALLHD VEDT
Sbjct: 9 FMECLQYAALKHREQRRKDPQETPYVNHVINVSTILSVEACITDEAVLMAALLHDVVEDT 68
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
D TF ++E FG V +V E+TD+K + + ERKR QI++A SS AKL+KLADKL NL
Sbjct: 69 DATFVDVEELFGADVCGLVREVTDDKSLEKQERKRLQIVNASKSSCRAKLIKLADKLDNL 128
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD++ + P WTEER+ QYF WA+ VV LRGTN +E +LD +F
Sbjct: 129 RDLQVNTPKGWTEERREQYFIWAKQVVDNLRGTNVNLELKLDEIF 173
>gi|345870076|ref|ZP_08822031.1| metal dependent phosphohydrolase [Thiorhodococcus drewsii AZ1]
gi|343922463|gb|EGV33165.1| metal dependent phosphohydrolase [Thiorhodococcus drewsii AZ1]
Length = 177
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 115/166 (69%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A FA+HKH QRRKD E +PYI HP+ + +L+ V +PVV+ +ALLHDTVEDT
Sbjct: 9 VAEALSFAAHKHRDQRRKDREASPYINHPIGLMRLLSAEAGVLDPVVLCAALLHDTVEDT 68
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
TT EE++ FG +RSVV E+TD++ +++ ERK+ QI HA S A+LVKLADK+ NL
Sbjct: 69 QTTPEELDACFGAEIRSVVMEVTDDRSLSKAERKQLQIEHAKGLSEAARLVKLADKICNL 128
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFA 252
D+ S P W ER+ YF+WARDVV LRGT+A +EA D +A
Sbjct: 129 WDMANSPPSGWDLERRRAYFDWARDVVDQLRGTHAGLEAIFDTAYA 174
>gi|355694254|gb|AER99608.1| HD domain containing 3 [Mustela putorius furo]
Length = 144
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/136 (61%), Positives = 104/136 (76%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+V+A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ V+ +ALLHDTVED
Sbjct: 7 QLVEAADFAARKHRLQRRKDPEGTPYINHPIGVARILTHEAGITDIAVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDT+ +E+ER FG +VR +VEE+TD+K M + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTSLDEVERHFGAQVRRLVEEVTDDKTMPKLERKRLQVERAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLPVNWTEER 221
LRD+ R P W+E R
Sbjct: 127 LRDLNRCTPEGWSEHR 142
>gi|344344922|ref|ZP_08775781.1| metal dependent phosphohydrolase [Marichromatium purpuratum 984]
gi|343803616|gb|EGV21523.1| metal dependent phosphohydrolase [Marichromatium purpuratum 984]
Length = 182
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 120/172 (69%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
+++ + V+A DFA+ KH QRRKD +PYI HP+A+ +L V++PVV+ +ALLHD
Sbjct: 7 ESLADFVRALDFAADKHRDQRRKDERASPYINHPIALTRVLIDEAGVTDPVVLCAALLHD 66
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLAD 201
T+EDT TT E+ FG V +VV E++D++ + + ERKR QI HAP S +A+LVKLAD
Sbjct: 67 TIEDTATTEAELIAHFGREVAAVVLEVSDDRSLAQHERKRLQIEHAPQLSEQARLVKLAD 126
Query: 202 KLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
K+ NLRDI S P +W+ ER+ YF+WA V+ GLRGT+A +EA D + A+
Sbjct: 127 KICNLRDILDSPPPDWSRERQRAYFDWAGQVIDGLRGTHAVLEAAFDRVHAQ 178
>gi|170578234|ref|XP_001894327.1| HD domain containing protein [Brugia malayi]
gi|158599148|gb|EDP36839.1| HD domain containing protein [Brugia malayi]
Length = 176
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 113/168 (67%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+VKA +FA+ +H QRRKD TPYI HP+ VA+IL+ V++ I +ALLHDTVEDT
Sbjct: 6 VVKACNFAAERHRLQRRKDALQTPYINHPIGVANILSSEVGVTDSATIAAALLHDTVEDT 65
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
TTF+EI FG + +V+E TD+K + RK+ QI +A SH+AKL+ LADKL+NL
Sbjct: 66 STTFQEISSLFGEEISQIVQECTDDKSLPASVRKQLQIENAAKHSHKAKLIHLADKLYNL 125
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKY 254
RD+ER PV W+ +R +YF W++ + L+GTN +E LD + +Y
Sbjct: 126 RDLERETPVGWSTQRVKEYFIWSKAIASELKGTNEALEVALDDVINRY 173
>gi|194906440|ref|XP_001981375.1| GG12030 [Drosophila erecta]
gi|190656013|gb|EDV53245.1| GG12030 [Drosophila erecta]
Length = 179
Score = 172 bits (437), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 116/165 (70%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++ +A+ KH QRRKDP+ TPY+ H + V+ IL+ +++ V+++ALLHD VEDT
Sbjct: 9 FMECLQYAAFKHRQQRRKDPQETPYVNHVINVSTILSVEACITDEAVLMAALLHDVVEDT 68
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
D +FE++E+ FG V +V E+TD+K + + ERKR QI +A SS AKL+KLADKL NL
Sbjct: 69 DASFEDVEKLFGADVCGLVREVTDDKSLEKQERKRLQIENAAKSSCRAKLIKLADKLDNL 128
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD++ + P WT+ER+ QYF WA+ VV L+GTN +E +LD +F
Sbjct: 129 RDLQVNTPTGWTQERREQYFVWAKKVVDNLKGTNDHLELKLDEIF 173
>gi|308490376|ref|XP_003107380.1| hypothetical protein CRE_13952 [Caenorhabditis remanei]
gi|308251748|gb|EFO95700.1| hypothetical protein CRE_13952 [Caenorhabditis remanei]
Length = 227
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/169 (47%), Positives = 117/169 (69%), Gaps = 1/169 (0%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++KA+DFA+ +H Q+RKD TPYI HP+ V +ILT+ KV +PV + A+LHD VEDT
Sbjct: 59 VMKASDFAARRHRHQKRKD-NATPYINHPIGVMYILTNEAKVYDPVTLAGAVLHDVVEDT 117
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T+ EEI++EFG V VV+E TD+K + + ERK+ QI + SH KLV LADKL+NL
Sbjct: 118 KTSLEEIQKEFGDEVLEVVKECTDDKALPKAERKKLQIENYGKHSHRTKLVHLADKLYNL 177
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYC 255
RD+ER P+ W ++R +YF W+R+V+ ++GTN +E LD + ++
Sbjct: 178 RDLERKAPIGWDKKRVNEYFKWSREVISQMKGTNEALEYALDDVINRHL 226
>gi|198432497|ref|XP_002130856.1| PREDICTED: similar to HD domain-containing protein 3 [Ciona
intestinalis]
Length = 179
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/165 (57%), Positives = 124/165 (75%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++K DFA+ KH QRRKD E TPYI HP+ VA+IL+ + + VV+ +A+LHDTVEDT
Sbjct: 7 LLKTVDFAAKKHRDQRRKDTEMTPYINHPIGVANILSEEAGIKDLVVLQAAVLHDTVEDT 66
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
+TTFEEIE FG V+SVV E+TD+K + ++ERK+ Q+ +APH S EAKLVKLADKL+NL
Sbjct: 67 ETTFEEIEELFGKTVKSVVAEVTDDKTLPKEERKKLQVCNAPHKSREAKLVKLADKLYNL 126
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD+ R P W+E+R +YF WA VV GLR TN+ +E +LDALF
Sbjct: 127 RDLNRCSPQGWSEQRVEEYFKWAFKVVAGLRNTNSMLEEKLDALF 171
>gi|153870413|ref|ZP_01999820.1| metal-dependent phosphohydrolase, HD subdomain [Beggiatoa sp. PS]
gi|152073114|gb|EDN70173.1| metal-dependent phosphohydrolase, HD subdomain [Beggiatoa sp. PS]
Length = 190
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 119/185 (64%), Gaps = 3/185 (1%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
M + D I + A FA+ KH QRRKD E +PYI HP+ VAHIL +G V + V I+ A
Sbjct: 1 MFNSDEITLFMAALKFAAVKHRQQRRKDNEASPYINHPIEVAHILWEIGNVHDMVTIVGA 60
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLV 197
LLHDT+EDTD T EEI +FG V +VV+E+TD+K + + ERKR QI A H S AK +
Sbjct: 61 LLHDTLEDTDATPEEIHHQFGAEVLAVVQEVTDDKSLPKLERKRLQIEQASHHSARAKQI 120
Query: 198 KLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCTP 257
KLADK+ N+ D+ S P +W+ +R +Y W+ VV GLRG N +EA DA+ A+
Sbjct: 121 KLADKICNVYDLAHSPPKDWSLKRCQEYLTWSEKVVAGLRGVNPALEARYDAVLAE---A 177
Query: 258 REGRE 262
R+G E
Sbjct: 178 RKGTE 182
>gi|330805371|ref|XP_003290657.1| hypothetical protein DICPUDRAFT_155188 [Dictyostelium purpureum]
gi|325079223|gb|EGC32834.1| hypothetical protein DICPUDRAFT_155188 [Dictyostelium purpureum]
Length = 208
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 127/194 (65%), Gaps = 13/194 (6%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
M + ++N++K+ DF+ KH QRRKD TPYI HP+ V + LT G +++ ++ +A
Sbjct: 1 MDINNNLLNLMKSIDFSCKKHRDQRRKDSHSTPYINHPIGVTYKLTQAG-INDFDILQAA 59
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLV 197
+LHDTVEDT+TT EE+ +EFG +V ++V E+TD+K ++ +RKR QI HA H S EAK V
Sbjct: 60 ILHDTVEDTNTTEEELVKEFGRKVATIVMEVTDDKSESKADRKRHQIEHAKHISKEAKSV 119
Query: 198 KLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKY--- 254
KLADKL NL DI+ + P +W+ + YF WA+ V+Q LRGTN +E++LD +F+
Sbjct: 120 KLADKLFNLSDIQTNAPPSWSIDVIQGYFIWAKAVIQNLRGTNQILESQLDEIFSSTFIK 179
Query: 255 ---------CTPRE 259
CTP E
Sbjct: 180 GDKHYPTIPCTPEE 193
>gi|347538876|ref|YP_004846300.1| metal dependent phosphohydrolase [Pseudogulbenkiania sp. NH8B]
gi|345642053|dbj|BAK75886.1| metal dependent phosphohydrolase [Pseudogulbenkiania sp. NH8B]
Length = 184
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 120/172 (69%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++KA FA+ KH QRRKD + +PYI HP+A+A++L + G + + ++ +A+LHDT+EDT
Sbjct: 13 LIKAIAFAAEKHRNQRRKDADASPYINHPIALANVLANEGGIEDATILCAAVLHDTIEDT 72
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
+TT E + + G +V S+V E+TD+K + + RK+ +I HAPH S EAKLVKLADK+ NL
Sbjct: 73 ETTMEGLIQLVGHKVASIVLEVTDDKALEKHVRKQQKIEHAPHLSSEAKLVKLADKICNL 132
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCTPR 258
RDI S P +W+ +RK YF+WA VV G+RG + +EA +FA++ R
Sbjct: 133 RDILASPPADWSADRKQAYFDWAAQVVDGVRGIHPELEAVFGGVFARHADLR 184
>gi|324510687|gb|ADY44468.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
[Ascaris suum]
Length = 169
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 113/166 (68%)
Query: 88 VKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTD 147
+KA D A+ +H QRR DP TP+I HPV VA+ILT+ KV + V I++A+LHD +EDT+
Sbjct: 1 MKAVDLAARRHRCQRRADPARTPFINHPVGVAYILTNEAKVYDAVTIVAAILHDILEDTE 60
Query: 148 TTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLR 207
TT+ EI FG V ++V E T +K +RD RK Q +A SH+AKLV+LADKL+N+R
Sbjct: 61 TTYIEIREMFGHEVATIVSECTIDKSQSRDARKEKQTRNASKLSHKAKLVELADKLYNMR 120
Query: 208 DIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
DIER +P+ W RK ++F WARD V ++GTN +E +D + +
Sbjct: 121 DIERVMPLCWNARRKREHFEWARDYVAEMKGTNEALETAIDEVINR 166
>gi|195449527|ref|XP_002072111.1| GK22495 [Drosophila willistoni]
gi|194168196|gb|EDW83097.1| GK22495 [Drosophila willistoni]
Length = 178
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 112/159 (70%)
Query: 93 FASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEE 152
+A+HKH QRRKDP+ +PY+ H + V+ IL + + V+++ALLHD VEDTD +F +
Sbjct: 14 YAAHKHRDQRRKDPQESPYVNHVINVSTILAVEAGIEDENVLMAALLHDVVEDTDASFAD 73
Query: 153 IEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIERS 212
+E FG + S+V E+TD+K + + +RKR QI +A +S AKL+KLADKL NLRD++ +
Sbjct: 74 VEELFGGDICSLVREVTDDKTLEKQQRKRLQIANAAKTSSRAKLIKLADKLDNLRDLQIN 133
Query: 213 LPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
P WTEER+ QYF WA+ VV LR TN+ +E ELD +F
Sbjct: 134 TPRGWTEERRVQYFVWAKQVVDQLRATNSILEEELDKIF 172
>gi|124002381|ref|ZP_01687234.1| metal-dependent phosphohydrolase [Microscilla marina ATCC 23134]
gi|123992210|gb|EAY31578.1| metal-dependent phosphohydrolase [Microscilla marina ATCC 23134]
Length = 185
Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 116/167 (69%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA +F++ KH QRRK P+ PYI HP+ VAH+L G+ N ++I+A+LHDT+EDT
Sbjct: 11 LFKALEFSAFKHKDQRRKGPQNIPYINHPIQVAHVLIETGQAYNTNLLIAAILHDTIEDT 70
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTT EEI++ FG V ++V E+TD+K++ + RK+ QI +P +S++AKL+KLADK+ N+
Sbjct: 71 DTTEEEIKQVFGENVAALVMEVTDDKNLFWEARKQLQIEKSPFASYDAKLLKLADKICNV 130
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
RD+ + P W+ +RK +Y WA DV+ G+RG N P+E D K
Sbjct: 131 RDLVINPPDKWSLDRKLEYLQWASDVIAGIRGVNQPMEDLFDEWIYK 177
>gi|440791482|gb|ELR12720.1| HD domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 309
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/186 (50%), Positives = 123/186 (66%), Gaps = 20/186 (10%)
Query: 67 EAPDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLG 126
E + GD DS S ++KA FA+ KH Q+RKD +GTPYI HP+ VA L+ G
Sbjct: 108 EEEENGDLDSFTLSN----CLLKAAHFAATKHRLQKRKDDDGTPYINHPLGVAWSLSEEG 163
Query: 127 KVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH 186
V + + +A+LHDTVEDTDTTFEE+EREFG +V ++V E+TD+K + +D RK+ Q+ H
Sbjct: 164 GVKDVETLQAAMLHDTVEDTDTTFEELEREFGIKVAAIVREVTDDKSLAKDARKKHQVKH 223
Query: 187 APHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAE 246
APH S +AKLVKLADKL+NLRD+ R+ PV VVQG+RGTN +E +
Sbjct: 224 APHLSKQAKLVKLADKLYNLRDLLRA-PVP---------------VVQGIRGTNIGLEEK 267
Query: 247 LDALFA 252
LD +FA
Sbjct: 268 LDEVFA 273
>gi|254250309|ref|ZP_04943628.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Burkholderia cenocepacia PC184]
gi|124879443|gb|EAY66799.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Burkholderia cenocepacia PC184]
Length = 196
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/183 (47%), Positives = 120/183 (65%), Gaps = 1/183 (0%)
Query: 71 TGDSDSGMHSPDAIMN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVS 129
G + +G+ + M +V A FA+ KH QRRKD E +PYI HP+A+A +L + V
Sbjct: 9 AGSTAAGLATRGGNMKKLVAAIAFAADKHRNQRRKDEEASPYINHPIALADVLANEAGVE 68
Query: 130 NPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPH 189
+ VI++A+LHDTVEDT+TT +E+ R FG V +V E+TD+K + ++ERKR Q+ HA
Sbjct: 69 DERVIVAAVLHDTVEDTETTEQELLRLFGKDVADIVMEVTDDKSLPKEERKRLQVEHAAT 128
Query: 190 SSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDA 249
S AKLVKLADK+ NLRDI R P +W ERK YF+WA+ VV +RG + +EA D
Sbjct: 129 ISRRAKLVKLADKICNLRDIARHPPADWPLERKQAYFDWAKSVVDPMRGVHPGLEAIFDT 188
Query: 250 LFA 252
+A
Sbjct: 189 AYA 191
>gi|374292178|ref|YP_005039213.1| putative metal-dependent phosphohydrolase [Azospirillum lipoferum
4B]
gi|357424117|emb|CBS86983.1| putative metal-dependent phosphohydrolase [Azospirillum lipoferum
4B]
Length = 192
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 112/168 (66%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+++ +A DFA+HKH QRRK PY+ H VA ++ +PVV+I+ALLHDT+
Sbjct: 13 LLDFARALDFAAHKHIDQRRKGVRAEPYVNHLSEVALLVAEATAGKDPVVVIAALLHDTL 72
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDTD ++EEIE+ FG V VV E TD+K M++ ERK+ QI APH+S AKLVKLADK+
Sbjct: 73 EDTDASYEEIEQLFGAEVVQVVAETTDDKRMSKAERKQHQIDAAPHASTRAKLVKLADKV 132
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
NLR + S P +W RK +YF WA VV GLRGT+A +E+ D +
Sbjct: 133 SNLRSMAHSPPADWPLSRKVEYFEWAHAVVAGLRGTDARLESLFDRAY 180
>gi|125772945|ref|XP_001357731.1| GA11268 [Drosophila pseudoobscura pseudoobscura]
gi|54637463|gb|EAL26865.1| GA11268 [Drosophila pseudoobscura pseudoobscura]
Length = 179
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 112/165 (67%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+K +A+H+H QRRKDP TPY+ H + V+ IL + + V+++ALLHD VEDT
Sbjct: 9 FMKCLQYAAHQHRDQRRKDPPQTPYVNHVINVSTILAVEACIEDEAVLMAALLHDVVEDT 68
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
D TF ++E+ FG V +V E+TD+K + + ERKR QI +A +S AKL+KLADKL NL
Sbjct: 69 DATFADVEQLFGGDVCGLVREVTDDKSLEKQERKRLQIANAAKTSPRAKLIKLADKLDNL 128
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD+ + P WTEER+ YF WA+ VV LRGTNA +E +LD +F
Sbjct: 129 RDLLINTPQGWTEERRELYFVWAKQVVDNLRGTNANLEHKLDEIF 173
>gi|442756225|gb|JAA70272.1| Putative guanosine polyphosphate pyrophosphohydrolase/synthase
[Ixodes ricinus]
Length = 190
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 85/165 (51%), Positives = 112/165 (67%), Gaps = 1/165 (0%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+++ +FA+ KH Q+RKD TPY + + + I +A+LHDTVEDT
Sbjct: 8 LIETVNFAAIKHRHQQRKDGH-TPYDQPSNRRGQDIDARSGNFDLTTIQAAILHDTVEDT 66
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTT EEIE FG RVR++V+E+TD+K + + RKR QI HAPHSSHEAKLVKLADKL+NL
Sbjct: 67 DTTPEEIEEHFGSRVRAIVDEVTDDKRLPSEVRKRLQIEHAPHSSHEAKLVKLADKLYNL 126
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD+ ++P+ W E+R YF W+ VV GLRGTN P+E LD +F
Sbjct: 127 RDLSATIPLGWNEQRVQAYFEWSEKVVHGLRGTNKPMEQALDQVF 171
>gi|170703733|ref|ZP_02894453.1| metal dependent phosphohydrolase [Burkholderia ambifaria IOP40-10]
gi|170131359|gb|EDS99966.1| metal dependent phosphohydrolase [Burkholderia ambifaria IOP40-10]
Length = 174
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 114/168 (67%), Gaps = 1/168 (0%)
Query: 85 MN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN +V A FA+ KH QRRKD E +PYI HP+A+A +L + + + VI++A+LHDT+
Sbjct: 1 MNKLVAAIAFAADKHRNQRRKDDEASPYINHPIALADVLANEAGIEDERVIVAAVLHDTI 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+TT +E+ R FG V +V E+TD+K + +DERKR Q+ HA S AKLVKLADK+
Sbjct: 61 EDTETTEQELLRLFGKDVADIVMEVTDDKSLPKDERKRLQVEHAASISRRAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
NLRDI R P +W ERK YF+WA+ VV +RG + +E DA +
Sbjct: 121 CNLRDITRHPPADWPLERKQAYFDWAKSVVDRMRGVHPGLEGIFDAAY 168
>gi|170735194|ref|YP_001774308.1| metal dependent phosphohydrolase [Burkholderia cenocepacia MC0-3]
gi|169821232|gb|ACA95813.1| metal dependent phosphohydrolase [Burkholderia cenocepacia MC0-3]
Length = 174
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 114/169 (67%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +V A FA+ KH QRRKD E +PYI HP+A+A +L + V + VI++A+LHDTV
Sbjct: 1 MKKLVAAIAFAADKHRNQRRKDEEASPYINHPIALADVLANEAGVDDERVIVAAVLHDTV 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+TT +E+ R FG V +V E+TD+K + ++ERKR Q+ HA S AKLVKLADK+
Sbjct: 61 EDTETTEQELLRLFGKDVADIVMEVTDDKSLPKEERKRLQVEHAATISRRAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFA 252
NLRDI R P +W ERK YF+WA+ VV +RG + +EA D +A
Sbjct: 121 CNLRDIARHPPADWPLERKQAYFDWAKSVVDPMRGVHPGLEAIFDTAYA 169
>gi|107028600|ref|YP_625695.1| metal dependent phosphohydrolase [Burkholderia cenocepacia AU 1054]
gi|116686601|ref|YP_839848.1| metal dependent phosphohydrolase [Burkholderia cenocepacia HI2424]
gi|197295576|ref|YP_002154117.1| putative metal dependent phosphohydrolase [Burkholderia cenocepacia
J2315]
gi|421869231|ref|ZP_16300868.1| Metal dependent phosphohydrolase [Burkholderia cenocepacia H111]
gi|444364000|ref|ZP_21164358.1| HD domain protein [Burkholderia cenocepacia BC7]
gi|444372739|ref|ZP_21172169.1| HD domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|105897764|gb|ABF80722.1| metal dependent phosphohydrolase [Burkholderia cenocepacia AU 1054]
gi|116652316|gb|ABK12955.1| metal dependent phosphohydrolase [Burkholderia cenocepacia HI2424]
gi|195945055|emb|CAR57680.1| putative metal dependent phosphohydrolase [Burkholderia cenocepacia
J2315]
gi|358069838|emb|CCE51746.1| Metal dependent phosphohydrolase [Burkholderia cenocepacia H111]
gi|443592902|gb|ELT61672.1| HD domain protein [Burkholderia cenocepacia K56-2Valvano]
gi|443593836|gb|ELT62544.1| HD domain protein [Burkholderia cenocepacia BC7]
Length = 174
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/169 (49%), Positives = 114/169 (67%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +V A FA+ KH QRRKD E +PYI HP+A+A +L + V + VI++A+LHDTV
Sbjct: 1 MKKLVAAIAFAADKHRNQRRKDEEASPYINHPIALADVLANEAGVEDERVIVAAVLHDTV 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+TT +E+ R FG V +V E+TD+K + ++ERKR Q+ HA S AKLVKLADK+
Sbjct: 61 EDTETTEQELLRLFGKDVADIVMEVTDDKSLPKEERKRLQVEHAATISRRAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFA 252
NLRDI R P +W ERK YF+WA+ VV +RG + +EA D +A
Sbjct: 121 CNLRDIARHPPADWPLERKQAYFDWAKSVVDPMRGVHPGLEAIFDTAYA 169
>gi|167590544|ref|ZP_02382932.1| metal dependent phosphohydrolase [Burkholderia ubonensis Bu]
Length = 174
Score = 166 bits (421), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 115/168 (68%), Gaps = 1/168 (0%)
Query: 85 MN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN +V A FA+ KH QRRKD E +PYI HP+A+A +L + + + VI++A+LHDTV
Sbjct: 1 MNKLVAAIAFAADKHRNQRRKDDEASPYINHPIALADVLANEAGIEDERVIVAAVLHDTV 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+T +E+ R FG + +V E+TD+K + +DERKR QI HA H S AKLVKLADK+
Sbjct: 61 EDTETNEQELLRLFGKDIADIVMEVTDDKSLPKDERKRLQIEHAAHISRRAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
N+RD+ R P +W ER+ YF+WA+ VV +RG + +EA DA +
Sbjct: 121 CNVRDVARHPPADWPLERRQAYFDWAKAVVDRMRGVHPGLEAIFDAAY 168
>gi|195158747|ref|XP_002020247.1| GL13607 [Drosophila persimilis]
gi|194117016|gb|EDW39059.1| GL13607 [Drosophila persimilis]
Length = 179
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 111/165 (67%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+K +A+H+H QRRKDP TPY+ H + V+ IL + + V+++ALLHD VEDT
Sbjct: 9 FMKCLQYAAHQHRDQRRKDPPQTPYVNHVINVSTILAVEACIEDEAVLMAALLHDVVEDT 68
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
D TF ++E+ G V +V E+TD+K + + ERKR QI +A +S AKL+KLADKL NL
Sbjct: 69 DATFADVEQLLGGDVCGLVREVTDDKSLEKQERKRLQIANAAKTSPRAKLIKLADKLDNL 128
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
RD+ + P WTEER+ YF WA+ VV LRGTNA +E +LD +F
Sbjct: 129 RDLLVNTPQGWTEERRELYFVWAKQVVDNLRGTNANLEHKLDEIF 173
>gi|171321758|ref|ZP_02910669.1| metal dependent phosphohydrolase [Burkholderia ambifaria MEX-5]
gi|171092958|gb|EDT38199.1| metal dependent phosphohydrolase [Burkholderia ambifaria MEX-5]
Length = 174
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 114/168 (67%), Gaps = 1/168 (0%)
Query: 85 MN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN +V A FA+ KH QRRKD E +PYI HP+A+A +L + + + VI++A+LHDT+
Sbjct: 1 MNKLVAAIAFAADKHRNQRRKDDEASPYINHPIALADVLANEAGIEDERVIVAAVLHDTI 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+TT +E+ R FG V +V E+TD+K + +DERKR Q+ HA S AKLVKLADK+
Sbjct: 61 EDTETTEQELLRLFGKDVADIVMEVTDDKSLPKDERKRLQVEHAASISRRAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
NLRDI R P +W ERK YF+WA+ VV +RG + +E DA +
Sbjct: 121 CNLRDIARHPPADWPLERKQAYFDWAKLVVDRMRGVHPGLEGIFDAAY 168
>gi|392382925|ref|YP_005032122.1| putative metal-dependent phosphohydrolase [Azospirillum brasilense
Sp245]
gi|356877890|emb|CCC98746.1| putative metal-dependent phosphohydrolase [Azospirillum brasilense
Sp245]
Length = 183
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 112/169 (66%)
Query: 83 AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDT 142
A+++ +A +FA+HKH QRRK PY+ H VA + ++PVV+I+ALLHDT
Sbjct: 3 ALLDFARALEFAAHKHIDQRRKGVRAEPYLNHLSEVAFLCAEATAGNDPVVVIAALLHDT 62
Query: 143 VEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADK 202
+EDTD ++EEIE+ FG V VV E TD+K + + ERK+ QI AP +S AKLVKLADK
Sbjct: 63 LEDTDASYEEIEQHFGAEVAGVVAETTDDKRLRKAERKQRQIDAAPTASSRAKLVKLADK 122
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
+ NLR + S P +W ERK +YF WA VV GLRGT+A +E+ D +
Sbjct: 123 VSNLRSMAHSPPADWPLERKIEYFEWAHAVVAGLRGTDARLESLFDRAY 171
>gi|288958538|ref|YP_003448879.1| hD domain-containing protein 3 [Azospirillum sp. B510]
gi|288910846|dbj|BAI72335.1| hD domain-containing protein 3 [Azospirillum sp. B510]
Length = 192
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 111/168 (66%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+++ +A DFA+HKH QRRK PY+ H VA ++ + + VV+I+ALLHDT+
Sbjct: 13 LLDFARALDFAAHKHIDQRRKGVRAEPYVNHLSEVALLVAQATEGKDAVVVIAALLHDTL 72
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDTD ++EEIE+ FG V VV E TD+K M++ ERK+ QI APH+S AKLVKLADK+
Sbjct: 73 EDTDASYEEIEQLFGVEVVQVVAETTDDKRMSKAERKQRQIDAAPHASRRAKLVKLADKV 132
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
NLR + S P +W RK +YF WA VV GLRG +A +EA D +
Sbjct: 133 SNLRSMAHSPPADWPLSRKVEYFEWAHAVVAGLRGVDARLEALFDRAY 180
>gi|66807203|ref|XP_637324.1| guanosine-3',5'-bis 3'-diphosphatase [Dictyostelium discoideum AX4]
gi|60465741|gb|EAL63818.1| guanosine-3',5'-bis 3'-diphosphatase [Dictyostelium discoideum AX4]
Length = 208
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 117/168 (69%), Gaps = 1/168 (0%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
++ ++K+ DF+ KH QRRKD TPYI HP+ VA+ L G V + ++ +A+LHDT+
Sbjct: 6 LIQLMKSIDFSCKKHRDQRRKDSHSTPYINHPIGVAYNLIKAG-VYDSDILQAAILHDTI 64
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT TT EEI +EFG RV S V ++TD+K +++ ERK+ QI HA H +E+KLVK+ADKL
Sbjct: 65 EDTQTTKEEIIKEFGERVASYVMDVTDDKSLSKQERKKHQIEHALHIQNESKLVKMADKL 124
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
NLRDI+ + P +W+ + YF WA+ V+ LRG N +E++LD +F
Sbjct: 125 FNLRDIQTNAPPSWSVDVIQGYFVWAKAVINNLRGQNQWLESQLDEIF 172
>gi|172065015|ref|YP_001815727.1| metal dependent phosphohydrolase [Burkholderia ambifaria MC40-6]
gi|171997257|gb|ACB68174.1| metal dependent phosphohydrolase [Burkholderia ambifaria MC40-6]
Length = 174
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 114/168 (67%), Gaps = 1/168 (0%)
Query: 85 MN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN +V A FA+ KH QRRKD E +PYI HP+A+A +L + + + VI++A+LHDT+
Sbjct: 1 MNKLVAAIAFAADKHRNQRRKDDEASPYINHPIALADVLANEAGIEDERVIVAAVLHDTI 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+TT +E+ R FG V +V E+TD+K + ++ERKR Q+ HA S AKLVKLADK+
Sbjct: 61 EDTETTEQELLRLFGKDVADIVMEVTDDKSLPKEERKRLQVEHAATISRRAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
NLRDI R P +W ERK YF+WA+ VV +RG + +E DA +
Sbjct: 121 CNLRDITRRPPADWPLERKQAYFDWAKSVVDRMRGVHPGLEGIFDAAY 168
>gi|328874181|gb|EGG22547.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Dictyostelium
fasciculatum]
Length = 207
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 111/165 (67%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++ DFA+ KH QRRKD +PYI HP+ VA + ++G+ + + +ALLHDTVEDT
Sbjct: 9 VITTVDFAAKKHRDQRRKDKHSSPYINHPIGVALNVINVGQYYDVATVQAALLHDTVEDT 68
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
D T EEI +EFG V S+V ++TD+K +++ +RK+ Q+ HAPH ++K+VK+ADKL+NL
Sbjct: 69 DCTEEEIRKEFGSEVASIVMDVTDDKSLSKVDRKKFQVSHAPHIQDKSKIVKMADKLYNL 128
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
DI ++ P +W+ YF W + V GLRG NA +E LD LF
Sbjct: 129 SDIIKNAPPSWSLLTIQGYFVWGKKVCDGLRGVNASLEEALDQLF 173
>gi|390951194|ref|YP_006414953.1| metal dependent phosphohydrolase [Thiocystis violascens DSM 198]
gi|390427763|gb|AFL74828.1| metal dependent phosphohydrolase [Thiocystis violascens DSM 198]
Length = 177
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 115/167 (68%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+V A FA+HKH QRRKD + +PYI HP+A+ +L + +P+V+ +ALLHDTVEDT
Sbjct: 9 VVDALSFAAHKHRDQRRKDRDASPYINHPIALMRVLALEAGLQDPLVLGAALLHDTVEDT 68
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
+TT EE+ FGP +R +V E++D+K +++ ERK Q+LHA +S AKL+KLADK+ NL
Sbjct: 69 ETTPEELAERFGPAIRDLVLEVSDDKTLSKAERKHQQVLHAAGASEGAKLIKLADKICNL 128
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
RD+ + P W R+ +YF+WA V+ LRGT+ +EA D + A+
Sbjct: 129 RDVVNNPPSGWDLARRREYFDWAARVIDQLRGTHPGLEAIFDQVLAR 175
>gi|78059753|ref|YP_366328.1| metal dependent phosphohydrolase [Burkholderia sp. 383]
gi|77964303|gb|ABB05684.1| metal dependent phosphohydrolase [Burkholderia sp. 383]
Length = 174
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 113/168 (67%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +V A FA+ KH QRRKD E +PYI HP+A+A +L + V + VI++A+LHDTV
Sbjct: 1 MKKLVAAIAFAADKHRNQRRKDEEASPYINHPIALADVLANEAGVEDERVIVAAVLHDTV 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+TT +E+ R FG V +V E+TD+K + ++ERKR Q+ HA S AKLVKLADK+
Sbjct: 61 EDTETTEQELLRLFGKDVADIVMEVTDDKSLPKEERKRLQVEHASTISRRAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
NLRDI R P +W ERK YF+WA+ VV +RG + +EA D +
Sbjct: 121 CNLRDIARHPPADWPLERKQAYFDWAKSVVDPMRGVHPGLEAIFDTAY 168
>gi|254423080|ref|ZP_05036798.1| HD domain protein [Synechococcus sp. PCC 7335]
gi|196190569|gb|EDX85533.1| HD domain protein [Synechococcus sp. PCC 7335]
Length = 195
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 112/168 (66%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+ +KA DFA+ KH QRRKD TPYI HP+AVA IL +S+ VV+I+ALLHDTVED
Sbjct: 21 DFLKALDFAARKHRNQRRKDLAQTPYINHPIAVACILLLEAGISDEVVLIAALLHDTVED 80
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
T TT EE+E++FG V+ VV EL+D+K + + RK+ QI HA S A+LVKLADK N
Sbjct: 81 TATTLEELEQQFGKAVKEVVAELSDDKSLPKTVRKQQQIDHAAGLSDRARLVKLADKTAN 140
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
LRDI S P +W+ R Y W + V+ +RGT++ +E D +A+
Sbjct: 141 LRDIATSPPDDWSGTRIDDYLEWGKAVIDQIRGTHSELELLFDQAYAR 188
>gi|115360718|ref|YP_777855.1| metal dependent phosphohydrolase [Burkholderia ambifaria AMMD]
gi|115286046|gb|ABI91521.1| metal dependent phosphohydrolase [Burkholderia ambifaria AMMD]
Length = 174
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/168 (49%), Positives = 114/168 (67%), Gaps = 1/168 (0%)
Query: 85 MN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN +V A FA+ KH QRRKD E +PYI HP+A+A +L + + + VI++A+LHDT+
Sbjct: 1 MNKLVAAIAFAADKHRNQRRKDDEASPYINHPIALADVLANEAGIEDERVIVAAVLHDTI 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+TT +E+ R FG V +V E+TD+K + ++ERKR Q+ HA S AKLVKLADK+
Sbjct: 61 EDTETTEQELLRLFGKDVADIVMEVTDDKSLPKEERKRLQVEHAASISRRAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
NLRDI R P +W ERK YF+WA+ VV +RG + +E DA +
Sbjct: 121 CNLRDITRHPPADWPLERKQAYFDWAKSVVDRMRGVHPGLEGIFDAAY 168
>gi|387905844|ref|YP_006336181.1| GTP pyrophosphokinase/Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Burkholderia sp. KJ006]
gi|387580736|gb|AFJ89450.1| GTP pyrophosphokinase/Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Burkholderia sp. KJ006]
Length = 174
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 116/169 (68%), Gaps = 1/169 (0%)
Query: 85 MN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN +V A FA+ KH QRRKD + +PYI HP+A+A +L + + + V+++A+LHDT+
Sbjct: 1 MNKLVAAIAFAADKHRNQRRKDEDASPYINHPIALADVLANEAGIDDERVLVAAVLHDTI 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+TT +E+ R FG V +V E++D+K + +DERKR Q+ HA S AKLVKLADK+
Sbjct: 61 EDTETTEQELLRLFGKDVADIVMEVSDDKSLPKDERKRLQVEHAGSISRRAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFA 252
N+RDI R P +W ERK YF+WA+ VV +RG + +EA DA +A
Sbjct: 121 CNVRDIARHPPADWPLERKRAYFDWAKSVVDRMRGVHPGLEAIFDAAYA 169
>gi|296204043|ref|XP_002749174.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 [Callithrix jacchus]
Length = 160
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 100/129 (77%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA++KH QRRKDPEGTPYI HP+ VA ILTH +++ V+ +ALLHDTVED
Sbjct: 7 QLLEAADFAAYKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIAVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKLHN
Sbjct: 67 TDTTLDEVELHFGAQVRCLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLHN 126
Query: 206 LRDIERSLP 214
LRD+ R P
Sbjct: 127 LRDLNRCTP 135
>gi|416972071|ref|ZP_11937248.1| metal dependent phosphohydrolase [Burkholderia sp. TJI49]
gi|325520746|gb|EGC99771.1| metal dependent phosphohydrolase [Burkholderia sp. TJI49]
Length = 174
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 114/168 (67%), Gaps = 1/168 (0%)
Query: 85 MN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN +V A FA+ +H QRRKD + +PYI HP+A+A +L + + + VI++A+LHDT+
Sbjct: 1 MNKLVAAIAFAADRHRNQRRKDADASPYINHPIALADVLANEAGIEDERVIVAAVLHDTI 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+TT +E+ R FG V +V E+TD+K + +DERKR Q+ HA S AKLVKLADK+
Sbjct: 61 EDTETTEQELLRLFGKDVADIVMEVTDDKSLPKDERKRLQVEHAAQISRRAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
NLRDI R P +W ER+ YF+WA+ VV +RG + +EA D +
Sbjct: 121 CNLRDIARHPPADWPLERRQAYFDWAKSVVDRMRGVHPGLEAIFDTAY 168
>gi|134290929|ref|YP_001114698.1| metal dependent phosphohydrolase [Burkholderia vietnamiensis G4]
gi|134134118|gb|ABO58443.1| metal dependent phosphohydrolase [Burkholderia vietnamiensis G4]
Length = 174
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 115/169 (68%), Gaps = 1/169 (0%)
Query: 85 MN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN +V A FA+ KH QRRKD + +PYI HP+A+A +L + + + V+++A+LHDT+
Sbjct: 1 MNKLVAAIAFAADKHRNQRRKDEDASPYINHPIALADVLANEAGIDDERVLVAAVLHDTI 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT TT +E+ R FG V +V E++D+K + +DERKR Q+ HA S AKLVKLADK+
Sbjct: 61 EDTKTTEQELLRLFGKDVADIVMEVSDDKSLPKDERKRLQVEHAGSISRRAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFA 252
N+RDI R P +W ERK YF+WA+ VV +RG + +EA DA +A
Sbjct: 121 CNVRDIARHPPADWPLERKRAYFDWAKSVVDRMRGVHPGLEAIFDAAYA 169
>gi|363737660|ref|XP_003641883.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Gallus gallus]
Length = 158
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 101/166 (60%), Gaps = 27/166 (16%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPEGTPYI HP+ D
Sbjct: 7 RLLEAADFAAWKHREQRRKDPEGTPYINHPIX---------------------------D 39
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT EIE FGP VR VVEELTD+K + + ERKR Q+ A SS AKLVKLADKLHN
Sbjct: 40 TDTTLSEIEERFGPEVRRVVEELTDDKTLPKAERKRLQVERAAGSSARAKLVKLADKLHN 99
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LRD+ R P W+EER +YF WA +VV GLRGT+ P+EA L L
Sbjct: 100 LRDLRRCAPKGWSEERVQEYFRWAAEVVGGLRGTSPPLEAALRRLL 145
>gi|421479409|ref|ZP_15927105.1| HD domain protein [Burkholderia multivorans CF2]
gi|400223076|gb|EJO53411.1| HD domain protein [Burkholderia multivorans CF2]
Length = 174
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 117/169 (69%), Gaps = 1/169 (0%)
Query: 85 MN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN ++ A FA+ +H QRRKD E +PYI HP+A+A +L + + + VI++A+LHDT+
Sbjct: 1 MNKLIAAIAFAADRHRNQRRKDEEASPYINHPIALADVLANEVAIEDERVIVAAVLHDTI 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+TT +E+ R FG V ++V E+TD+K + ++ RKR QI HA H S AKLVKLADK+
Sbjct: 61 EDTETTEQELLRLFGKDVANIVLEVTDDKSLPKETRKRLQIEHAAHISRRAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFA 252
NLRD+ + P +W ERK YF+WA+ VV +RG + +EA DA +A
Sbjct: 121 CNLRDLAQHPPADWPLERKQAYFDWAKSVVDRMRGVHPGLEAIFDAAYA 169
>gi|38348360|ref|NP_940929.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
[Homo sapiens]
gi|114658941|ref|XP_001170024.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 isoform 1 [Pan troglodytes]
gi|297697473|ref|XP_002825878.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 isoform 2 [Pongo abelii]
gi|397472461|ref|XP_003807762.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 isoform 2 [Pan paniscus]
gi|21707465|gb|AAH33794.1| HD domain containing 3 [Homo sapiens]
gi|312152574|gb|ADQ32799.1| HD domain containing 3 [synthetic construct]
gi|410329431|gb|JAA33662.1| HD domain containing 3 [Pan troglodytes]
Length = 140
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 100/129 (77%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLP 214
LRD+ R P
Sbjct: 127 LRDLNRCTP 135
>gi|332238738|ref|XP_003268558.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 isoform 2 [Nomascus leucogenys]
Length = 140
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 100/129 (77%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLP 214
LRD+ R P
Sbjct: 127 LRDLNRRTP 135
>gi|161522372|ref|YP_001585301.1| metal dependent phosphohydrolase [Burkholderia multivorans ATCC
17616]
gi|189348751|ref|YP_001941947.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia multivorans ATCC 17616]
gi|160345925|gb|ABX19009.1| metal dependent phosphohydrolase [Burkholderia multivorans ATCC
17616]
gi|189338889|dbj|BAG47957.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia multivorans ATCC 17616]
Length = 174
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 115/169 (68%), Gaps = 1/169 (0%)
Query: 85 MN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN ++ A FA+ +H QRRKD E +PYI HP+A+A +L + + + VI +A+LHDT+
Sbjct: 1 MNKLIAAIAFAADRHRNQRRKDEEASPYINHPIALADVLANEVGIEDERVIAAAVLHDTI 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+TT +E+ R FG V +V E+TD+K + ++ RKR Q+ HA H S AKLVKLADK+
Sbjct: 61 EDTETTEQELLRLFGKDVADIVVEVTDDKSLPKETRKRLQVEHAAHISRRAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFA 252
NLRD+ R P +W ERK YF+WA+ VV +RG + +EA DA +A
Sbjct: 121 CNLRDLARHPPADWPLERKQAYFDWAKSVVDRMRGVHPGLEAIFDAAYA 169
>gi|391346747|ref|XP_003747630.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like [Metaseiulus occidentalis]
Length = 180
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 112/164 (68%), Gaps = 1/164 (0%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S + + V+A FA+ KH QRRKD TPYI HP+ VA+ L G +S+P ++ +A+L
Sbjct: 2 SASGLSDFVRACHFAAVKHTNQRRKDEAQTPYINHPLGVANHLVDCG-LSDPALLCAAVL 60
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
HDTVEDTDTTFEEI+ FG V ++V E++D+K + + +RK QI HA H+S +AKL+KL
Sbjct: 61 HDTVEDTDTTFEEIKDHFGQEVEALVREVSDDKSLPKMKRKELQIEHALHASPKAKLIKL 120
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPI 243
ADKL+NL D++R P WTE+R YF WA+ VV + +P+
Sbjct: 121 ADKLYNLEDLQRCTPKGWTEDRVNAYFEWAQKVVTNCKTGESPM 164
>gi|221212271|ref|ZP_03585249.1| metal dependent phosphohydrolase [Burkholderia multivorans CGD1]
gi|221168356|gb|EEE00825.1| metal dependent phosphohydrolase [Burkholderia multivorans CGD1]
Length = 174
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 115/169 (68%), Gaps = 1/169 (0%)
Query: 85 MN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN ++ A FA+ +H QRRKD E +PYI HP+A+A +L + + + VI++A+LHDT+
Sbjct: 1 MNKLIAAIAFAADRHRNQRRKDEEASPYINHPIALADVLANEVGIDDERVIVAAVLHDTI 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+TT +E+ R FG V +V E+TD+K + ++ RKR Q+ HA H S AKLVKLADK+
Sbjct: 61 EDTETTEQELLRLFGKDVADIVVEVTDDKSLPKETRKRLQVEHAAHISRRAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFA 252
NLR I R P +W ERK YF+WA+ VV +RG + +EA DA +A
Sbjct: 121 CNLRGIARHPPADWPLERKQAYFDWAKSVVDRMRGVHPGLEAIFDAAYA 169
>gi|426380336|ref|XP_004056829.1| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 isoform 2 [Gorilla gorilla gorilla]
Length = 140
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/129 (61%), Positives = 100/129 (77%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A DFA+ KH QRRKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVED
Sbjct: 7 QLLEAADFAARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVED 66
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AKLVKLADKL+N
Sbjct: 67 TDTTLDEVELHFGAQVRHLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADKLYN 126
Query: 206 LRDIERSLP 214
LRD+ R P
Sbjct: 127 LRDLNRCTP 135
>gi|449682207|ref|XP_002157565.2| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1-like, partial [Hydra magnipapillata]
Length = 144
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 106/138 (76%)
Query: 114 HPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKH 173
HP+ VA I++ +++ ++ISA+LHDTVEDT+TTFEE+E FG ++R +VEE +D+K
Sbjct: 1 HPIGVASIISSEAGITDVDILISAVLHDTVEDTNTTFEELEINFGKKIRGIVEECSDDKT 60
Query: 174 MTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
+ +D RK+ QI AP SS+EAK+VKLADKL+NLRD+ + PV W+E R +YF WA VV
Sbjct: 61 LEKDVRKQMQIEKAPFSSYEAKVVKLADKLYNLRDLLINTPVGWSEGRVNEYFIWALQVV 120
Query: 234 QGLRGTNAPIEAELDALF 251
+GL+GTN+ +E EL+++F
Sbjct: 121 RGLKGTNSVLETELESIF 138
>gi|221199149|ref|ZP_03572194.1| metal dependent phosphohydrolase [Burkholderia multivorans CGD2M]
gi|221205406|ref|ZP_03578422.1| metal dependent phosphohydrolase [Burkholderia multivorans CGD2]
gi|421472017|ref|ZP_15920252.1| HD domain protein [Burkholderia multivorans ATCC BAA-247]
gi|221175197|gb|EEE07628.1| metal dependent phosphohydrolase [Burkholderia multivorans CGD2]
gi|221181600|gb|EEE14002.1| metal dependent phosphohydrolase [Burkholderia multivorans CGD2M]
gi|400224090|gb|EJO54348.1| HD domain protein [Burkholderia multivorans ATCC BAA-247]
Length = 174
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 115/169 (68%), Gaps = 1/169 (0%)
Query: 85 MN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN ++ A FA+ +H QRRKD E +PYI HP+A+A +L + + + VI++A+LHDT+
Sbjct: 1 MNKLIAAIAFAADRHRNQRRKDEEASPYINHPIALADVLANEVGIEDERVIVAAVLHDTI 60
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+TT E+ R FG V +V E+TD+K + ++ RKR Q+ HA H S AKLVKLADK+
Sbjct: 61 EDTETTELELLRLFGKDVADIVLEVTDDKSLPKETRKRLQVEHAAHISRRAKLVKLADKI 120
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFA 252
NLRDI + P +W ERK YF+WA+ VV +RG + +EA DA +A
Sbjct: 121 CNLRDIAQHPPADWPLERKQAYFDWAKSVVDRMRGVHPGLEAIFDAAYA 169
>gi|281210329|gb|EFA84496.1| guanosine-3',5'-bis-diphosphate- 3'-diphosphatase [Polysphondylium
pallidum PN500]
Length = 209
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 112/168 (66%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
I++++ +FA+ KH QRRKD GTPYI HP+ VA + ++GKV + I +ALLHDTV
Sbjct: 8 ILDLMSTVEFAALKHRDQRRKDQHGTPYINHPIGVAMNVINIGKVYDVATIQAALLHDTV 67
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT TT +E+ +FG V ++V ++TD+K +++ ERKR QI HA H S EAK+VK++DKL
Sbjct: 68 EDTATTKQELVDKFGEHVANIVMDVTDDKSLSKVERKRLQIEHASHISAEAKIVKMSDKL 127
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
+NL D+ + P +W+ E YF W + V LR N +E LD LF
Sbjct: 128 YNLTDMVSNAPPSWSLEIIQGYFVWGKQVCHQLRNVNKGLEEALDKLF 175
>gi|312382009|gb|EFR27605.1| hypothetical protein AND_05605 [Anopheles darlingi]
Length = 151
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 104/136 (76%)
Query: 118 VAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRD 177
VA+IL+ G +++ V+ +A+LHDTVEDT+TTFEEIE+ FGP +RS+V+E+TD+K + +
Sbjct: 12 VANILSSEGGINDFDVLSAAILHDTVEDTETTFEEIEKHFGPTIRSLVQEVTDDKSLPKQ 71
Query: 178 ERKRCQILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLR 237
ERKR QI HA SH A+LVKLADK++NLRD++R P NWT+ER +YF WA+ V L+
Sbjct: 72 ERKRLQIEHARTISHGARLVKLADKIYNLRDLQRCSPKNWTDERCREYFRWAKQVCDNLK 131
Query: 238 GTNAPIEAELDALFAK 253
GTN P+E LD +F +
Sbjct: 132 GTNEPLERILDDIFRQ 147
>gi|119622530|gb|EAX02125.1| HD domain containing 3, isoform CRA_a [Homo sapiens]
Length = 153
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/139 (56%), Positives = 100/139 (71%)
Query: 115 PVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHM 174
P VA ILTH +++ VV+ +ALLHDTVEDTDTT +E+E FG +VR +VEE+TD+K +
Sbjct: 10 PEGVARILTHEAGITDIVVLQAALLHDTVEDTDTTLDEVELHFGAQVRRLVEEVTDDKTL 69
Query: 175 TRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQ 234
+ ERKR Q+ APHSS AKLVKLADKL+NLRD+ R P W+E R +YF WA VV+
Sbjct: 70 PKLERKRLQVEQAPHSSPGAKLVKLADKLYNLRDLNRCTPEGWSEHRVQEYFEWAAQVVK 129
Query: 235 GLRGTNAPIEAELDALFAK 253
GL+GTN +E L LF +
Sbjct: 130 GLQGTNRQLEEALKHLFKQ 148
>gi|449471905|ref|XP_002187489.2| PREDICTED: guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
MESH1 [Taeniopygia guttata]
Length = 164
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/143 (55%), Positives = 94/143 (65%)
Query: 115 PVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHM 174
P VA IL H + VV+ +ALLHDTVEDT TT E+E FG VR VVEE+TD+K +
Sbjct: 21 PSLVARILEHEAGQTEMVVLQAALLHDTVEDTATTPAELEERFGAAVRQVVEEVTDDKRL 80
Query: 175 TRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQ 234
+ ERKR QI AP S AKLVKLADKLHNLRD+ R P W+EER +YF WA VV
Sbjct: 81 PKAERKRLQIERAPACSRRAKLVKLADKLHNLRDLNRCTPQGWSEERVQEYFRWAARVVS 140
Query: 235 GLRGTNAPIEAELDALFAKYCTP 257
GLRGT+A +E L LF + P
Sbjct: 141 GLRGTSAALEGALQRLFEERGVP 163
>gi|392580396|gb|EIW73523.1| hypothetical protein TREMEDRAFT_56223 [Tremella mesenterica DSM
1558]
Length = 226
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 110/171 (64%), Gaps = 2/171 (1%)
Query: 81 PDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLH 140
PD M +++ DFA+ KH QRRKD + TPYI HP+AVA++L+ G V++ ++ +A+LH
Sbjct: 8 PDC-MVLMRTIDFAARKHQCQRRKDVDQTPYINHPIAVANLLSSTG-VTDVRILQAAILH 65
Query: 141 DTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLA 200
DTVEDT TT EE+ FG +V +VEE TD+ ++ ERK Q+ AP S EA++VKLA
Sbjct: 66 DTVEDTCTTVEELANMFGLQVARIVEECTDDTSLSGMERKLEQLRSAPFRSKEAQMVKLA 125
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
DKLHNL I RS PV W +R YF WA+ V + P+ A L L+
Sbjct: 126 DKLHNLESIRRSPPVGWGPKRIQNYFLWAKQVTDICASAHPPLAARLKHLY 176
>gi|116750979|ref|YP_847666.1| metal dependent phosphohydrolase [Syntrophobacter fumaroxidans
MPOB]
gi|116700043|gb|ABK19231.1| metal dependent phosphohydrolase [Syntrophobacter fumaroxidans
MPOB]
Length = 191
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 111/172 (64%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
D I I+ A F++ +H QRRKD TPYI HP+ VA +L +G V + +++ALLHD
Sbjct: 7 DDIAVILAALKFSAQRHRDQRRKDAVQTPYINHPIEVADLLWRVGNVHDLRALVAALLHD 66
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLAD 201
+EDT+T+ EIER FG V S+V E++D+K + + RK QI HAP+ S AK +KLAD
Sbjct: 67 IIEDTETSPGEIERSFGGEVLSLVLEVSDDKRLPKAIRKSLQIRHAPNLSLHAKAIKLAD 126
Query: 202 KLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
K+ N DI S P +W ER+ +Y +W VV GLRG+NA +E+ D + A+
Sbjct: 127 KICNTLDITHSPPHDWPVERRLEYLDWTEKVVAGLRGSNAALESLYDRVLAE 178
>gi|170596352|ref|XP_001902734.1| HD domain containing protein [Brugia malayi]
gi|158589414|gb|EDP28417.1| HD domain containing protein [Brugia malayi]
Length = 227
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 116/167 (69%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I+KA D A+ +H QRRKD TPY+ HP+ VA+ILT+ G++++ II+A+LHD VEDT
Sbjct: 58 IIKAADLAARRHRQQRRKDAMQTPYVNHPIGVAYILTNEGQITDTATIIAAILHDIVEDT 117
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T+ EEI FG V +V+E T K M R+ R + ++ AP SH+AKLV+LADKL+N+
Sbjct: 118 KTSDEEIREMFGDEVADIVKECTVIKSMKREARIKSELEKAPKLSHKAKLVQLADKLYNV 177
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
RDIER +P+ WT+++ +Y +A+D++ +RG + P+E LD + K
Sbjct: 178 RDIERCVPLGWTKQQVKEYILFAKDLLSIIRGIHGPLEIALDDIINK 224
>gi|320162465|ref|YP_004175690.1| hypothetical protein ANT_30640 [Anaerolinea thermophila UNI-1]
gi|319996319|dbj|BAJ65090.1| hypothetical protein ANT_30640 [Anaerolinea thermophila UNI-1]
Length = 193
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 109/167 (65%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ A FA+ +H QRRK PYI H + VAH+L +G V +P V+ +A+LHD +EDT
Sbjct: 18 LFAALSFAAERHRDQRRKGVLHAPYINHLIEVAHLLWAVGGVRDPEVLAAAVLHDVLEDT 77
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T+ EEI R FG RVR++V+E++D+K + + ERKR Q HAP + +AKL+KLADK+ N+
Sbjct: 78 PTSPEEINRLFGARVRALVQEVSDDKSLPQAERKRLQEEHAPCLTADAKLIKLADKISNV 137
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
R I P W++ R+ +Y WA VV G+RG N +E E D + A+
Sbjct: 138 RSILEDPPEQWSDARRREYVAWAVRVVAGMRGVNPALEDEFDRMVAR 184
>gi|167522731|ref|XP_001745703.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776052|gb|EDQ89674.1| predicted protein [Monosiga brevicollis MX1]
Length = 208
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
++KA FA H Q RK +GTPY+ HP+ VA LT + +++ ++ +ALLHD VED
Sbjct: 13 GLLKAAAFAGRAHGKQTRKG-DGTPYVNHPIQVAEFLTEIAGITDLAILQAALLHDVVED 71
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
T T +I FG +V V+E++D+K TR ERK +I HA +S AKL+KLADKLHN
Sbjct: 72 TSVTLADIRAAFGDQVAGYVQEVSDDKSCTRHERKAAEIEHARTASRGAKLIKLADKLHN 131
Query: 206 LRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELD 248
LR ++ + P +W + R YF +A ++++ RGTNA +EA +
Sbjct: 132 LRSVQGTPPASWDQHRAHAYFGFASEILEACRGTNAALEAAFE 174
>gi|312088149|ref|XP_003145747.1| hypothetical protein LOAG_10172 [Loa loa]
gi|307759088|gb|EFO18322.1| hypothetical protein LOAG_10172 [Loa loa]
Length = 225
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/174 (44%), Positives = 117/174 (67%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
D I I++A D A+ +H QRRKD TPY+ HP+ VA+ILT G++++ II+A+LHD
Sbjct: 51 DGISLIIEAVDLAARRHRQQRRKDAAQTPYVNHPIGVAYILTSEGQITDTTTIIAAILHD 110
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLAD 201
VE T TT EEI + FG + +V+E T + M R+ R + ++ A SH+AKLV+LAD
Sbjct: 111 IVEHTKTTDEEIRKMFGDEIADIVKECTMVRSMKREARMKSELEKASKLSHKAKLVQLAD 170
Query: 202 KLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYC 255
KL+N+RDIER P+ WT++ T+Y +A+D++ +RG + P+E+ LD + K+
Sbjct: 171 KLNNIRDIERGTPLGWTKQHVTEYIIFAKDLLSKIRGIHGPLESALDDIINKHI 224
>gi|334130115|ref|ZP_08503917.1| HD domain-containing protein 3 [Methyloversatilis universalis FAM5]
gi|333444750|gb|EGK72694.1| HD domain-containing protein 3 [Methyloversatilis universalis FAM5]
Length = 197
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 112/172 (65%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
M + A +++A FA+ KH Q RK + PYI HP+AVA IL G V + +I+A
Sbjct: 1 MTASFASAALLEALTFAALKHQGQTRKSADRAPYIHHPIAVATILAREGGVQDTDTLIAA 60
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLV 197
LLHDT+EDTDT+ E++R FG RV ++V EL+D+ + + ERK Q+L A S A+LV
Sbjct: 61 LLHDTLEDTDTSEAELQRHFGARVAAIVAELSDDMTLPKPERKAIQVLRAHDYSPPARLV 120
Query: 198 KLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDA 249
+LADK+ N+RD+ + P +W ER+ +Y +W+ +VV LRGT+A +EA A
Sbjct: 121 RLADKIANVRDVIDNPPQDWPLERRVRYLSWSGEVVAALRGTHAELEARFHA 172
>gi|418059956|ref|ZP_12697888.1| metal dependent phosphohydrolase [Methylobacterium extorquens DSM
13060]
gi|373566504|gb|EHP92501.1| metal dependent phosphohydrolase [Methylobacterium extorquens DSM
13060]
Length = 175
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 100/162 (61%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A DFA+ +H Q+RK PY+ H VA +L + ++ + LHDT+EDT
Sbjct: 4 VSRAADFAARRHADQQRKGAAREPYLNHLAEVATLLAETMGEPDAALVAAGWLHDTLEDT 63
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T EE+ER FGPRV S+V E+TD+K + + ERKR Q+ APH S AK +KLADK NL
Sbjct: 64 QTDREELERLFGPRVASLVAEVTDDKSLPKAERKRRQVEAAPHKSAGAKAIKLADKTSNL 123
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELD 248
R + S P W +R Y WA++VV G RGTNAP+E+ D
Sbjct: 124 RSLTASPPEGWERQRIADYIAWAQEVVAGCRGTNAPLESLFD 165
>gi|240139772|ref|YP_002964249.1| hypothetical protein MexAM1_META1p3226 [Methylobacterium extorquens
AM1]
gi|240009746|gb|ACS40972.1| Conserved hypothetical protein; putative domain Metal dependent
phosphohydrolase [Methylobacterium extorquens AM1]
Length = 186
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 100/162 (61%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A DFA+ +H Q+RK PY+ H VA +L + ++ + LHDT+EDT
Sbjct: 15 VSRAADFAARRHADQQRKGAAREPYLNHLAEVATLLAETMGEPDAALVAAGWLHDTLEDT 74
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T EE+ER FGPRV S+V E+TD+K + + ERKR Q+ APH S AK +KLADK NL
Sbjct: 75 QTDREELERLFGPRVASLVAEVTDDKSLPKAERKRRQVEAAPHKSAGAKAIKLADKTSNL 134
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELD 248
R + S P W +R Y WA++VV G RGTNAP+E+ D
Sbjct: 135 RSLTASPPEGWERQRIADYIAWAQEVVAGCRGTNAPLESLFD 176
>gi|402593089|gb|EJW87016.1| HD domain-containing protein [Wuchereria bancrofti]
Length = 226
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 113/167 (67%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I+KA D A+ +H QRRKD TPY+ HP+ VA+ILT+ G++++ II+A+LHD VEDT
Sbjct: 57 IIKAADLAARRHRQQRRKDAMQTPYVNHPIGVAYILTNEGQITDMATIIAAILHDIVEDT 116
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
TT EEI FG V +V+E T K M R+ R + ++ A SH+AKLV+LADKL+N+
Sbjct: 117 KTTDEEIREMFGDEVADIVKECTVIKSMKREARMKSELEKASKLSHKAKLVQLADKLYNV 176
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
RDIER P WT+++ +Y +A+D++ +RG + P+E LD + K
Sbjct: 177 RDIERCAPFGWTKQQVREYILFAKDLLSIIRGIHGPLEIALDDIINK 223
>gi|218531192|ref|YP_002422008.1| metal dependent phosphohydrolase [Methylobacterium extorquens CM4]
gi|218523495|gb|ACK84080.1| metal dependent phosphohydrolase [Methylobacterium extorquens CM4]
Length = 186
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/167 (43%), Positives = 101/167 (60%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A DFA+ +H Q+RK PY+ H VA +L + ++ + LHDT+EDT
Sbjct: 15 VSRAADFAARRHADQQRKGAAREPYLNHLAEVACLLAETMGEPDAALVAAGWLHDTLEDT 74
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T EE+ER FGPRV ++V E+TD+K + + ERKR Q+ APH S AK +K+ADK NL
Sbjct: 75 QTDLEELERLFGPRVAALVAEVTDDKSLPKAERKRRQVEAAPHKSAGAKAIKVADKTSNL 134
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
R + S P W ++R Y WA +VV G RGTNAP+E D A+
Sbjct: 135 RSLTASPPEGWEQQRIADYIAWAEEVVAGCRGTNAPLEDRFDRAVAE 181
>gi|321257995|ref|XP_003193774.1| hypothetical protein CGB_D6040C [Cryptococcus gattii WM276]
gi|317460244|gb|ADV21987.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 287
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 118/212 (55%), Gaps = 6/212 (2%)
Query: 40 LMYVPMVRKGKPEAPAVEVHVHEARLGEAPDTGDSDSGMHSPDAIMNIVKATDFASHKHH 99
L+ P R P P H + L AP G +H + +++ DFA+ KH
Sbjct: 32 LVRTPPARSFTPTPPLSRTHSADG-LSTAPTPGR----LHGESDLSLLLRTLDFAARKHS 86
Query: 100 FQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGP 159
QRRKD + +PYI HP++VA+ L+ G +++ V+ +A+LHDTVEDT TT EEI +FG
Sbjct: 87 CQRRKDVDQSPYINHPISVANYLSSTG-ITDIRVLQAAILHDTVEDTCTTLEEIADQFGN 145
Query: 160 RVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTE 219
V +VEE TDN + +RK Q+ AP S +A+ VKLADKLHNL I RS PV W
Sbjct: 146 DVARIVEECTDNTALDGLQRKVEQLRTAPSKSKQAQQVKLADKLHNLESIRRSPPVGWGI 205
Query: 220 ERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
+R YF WA+ V + P+ L L+
Sbjct: 206 KRVQAYFIWAKKVTDICAPAHPPLAERLQHLY 237
>gi|388581055|gb|EIM21366.1| HD-domain/PDEase-like protein [Wallemia sebi CBS 633.66]
Length = 203
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 105/169 (62%), Gaps = 1/169 (0%)
Query: 83 AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDT 142
+ ++ A FAS KH QRRKD + TPYI H + VA IL G + + +A+LHDT
Sbjct: 19 GFLRLLSAVTFASVKHKDQRRKDKDSTPYINHTLGVAQILAQSGH-DDLETLQAAILHDT 77
Query: 143 VEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADK 202
+EDT+T+ +E++ FG +V S+V E TD+K + + RK+ QI A S EAK VKLADK
Sbjct: 78 IEDTNTSLQELQHYFGNKVASIVLECTDDKGLPKAARKQAQINKAKSVSLEAKRVKLADK 137
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
L+NLRD++RS P NW+ R +YF WAR V + + I L+ ++
Sbjct: 138 LYNLRDLQRSAPTNWSTSRIKEYFIWARKVTSQIEDASHVISRNLNEVY 186
>gi|163852435|ref|YP_001640478.1| metal-dependent phosphohydrolase [Methylobacterium extorquens PA1]
gi|163664040|gb|ABY31407.1| metal-dependent phosphohydrolase HD sub domain [Methylobacterium
extorquens PA1]
Length = 186
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/162 (44%), Positives = 97/162 (59%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A DFA+ +H Q+RK PY+ H VA +L + ++ + LHDT+EDT
Sbjct: 15 VSRAADFAARRHAGQQRKGAAREPYLNHLAEVACLLAETMGEPDAALVAAGWLHDTLEDT 74
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T EE+ER FGPRV S+V E+TD+K + + ERKR Q+ AP+ S AK +KLADK NL
Sbjct: 75 QTDPEELERLFGPRVASLVAEVTDDKSLAKAERKRRQVEAAPYKSAGAKAIKLADKTSNL 134
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELD 248
R + S P W +R Y WA +VV G RGTNA +E D
Sbjct: 135 RSLTASPPEGWERQRIADYIAWAEEVVAGCRGTNAALEDRFD 176
>gi|254562184|ref|YP_003069279.1| hypothetical protein METDI3790 [Methylobacterium extorquens DM4]
gi|254269462|emb|CAX25428.1| Conserved hypothetical protein; putative domain Metal dependent
phosphohydrolase [Methylobacterium extorquens DM4]
Length = 186
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 99/167 (59%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A DFA+ +H Q+RK PY+ H VA +L + ++ + LHDT+EDT
Sbjct: 15 VSRAADFAARRHADQQRKGAAREPYLNHLAEVACLLAETMGAPDAALVAAGWLHDTLEDT 74
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T EE+E FGPRV S+V E+TD+K + + +RKR Q+ APH S AK +KLADK NL
Sbjct: 75 QTDREELESLFGPRVASLVAEVTDDKSLPKADRKRRQVEAAPHKSAGAKAIKLADKTSNL 134
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
R + S P W +R Y WA++VV G RGTNA +E D A+
Sbjct: 135 RSLTASPPEGWERQRIADYIAWAQEVVAGCRGTNAALEDRFDRAVAE 181
>gi|149057309|gb|EDM08632.1| HD domain containing 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 129
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 70/116 (60%), Positives = 86/116 (74%)
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAK 195
+ALLHDTVEDTDTT +E+E FG +VR +VEE+TD+K + + ERKR Q+ APHSS AK
Sbjct: 7 AALLHDTVEDTDTTLDEVELHFGAQVRRLVEEVTDDKTLPKLERKRQQVEQAPHSSPGAK 66
Query: 196 LVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
LVKLADKLHNLRD+ R P W+E R +YF WA VV+GL+GTN +E L LF
Sbjct: 67 LVKLADKLHNLRDLNRCTPKGWSEHRVQEYFEWAAQVVKGLQGTNQQLEEALKQLF 122
>gi|58267028|ref|XP_570670.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134110856|ref|XP_775892.1| hypothetical protein CNBD3000 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258558|gb|EAL21245.1| hypothetical protein CNBD3000 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226903|gb|AAW43363.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 287
Score = 143 bits (360), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 116/212 (54%), Gaps = 6/212 (2%)
Query: 40 LMYVPMVRKGKPEAPAVEVHVHEARLGEAPDTGDSDSGMHSPDAIMNIVKATDFASHKHH 99
L+ P R P P V + T + +H + +++ DFA+ KH
Sbjct: 32 LIRTPPARSFTPTPP-----VSRSLSANGSPTASTPGRLHGESDLSLLLRTLDFAARKHS 86
Query: 100 FQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGP 159
QRRKD + +PYI HP++VA+ L+ G +++ V+ +A+LHDTVEDT TT EEI +FG
Sbjct: 87 CQRRKDVDQSPYINHPISVANYLSSTG-ITDVHVLQAAILHDTVEDTCTTIEEIADQFGI 145
Query: 160 RVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTE 219
V +VEE TDN + +RK Q+ AP S +A+ VKLADKLHNL I RS PV W
Sbjct: 146 DVARIVEECTDNTALDGLQRKVEQLRAAPSKSKQAQQVKLADKLHNLESIRRSPPVGWGM 205
Query: 220 ERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
+R YF WA+ V + P+ L L+
Sbjct: 206 KRVQAYFIWAKRVTDICAPAHPPLAERLQRLY 237
>gi|405120160|gb|AFR94931.1| hypothetical protein CNAG_01212 [Cryptococcus neoformans var.
grubii H99]
Length = 287
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 118/217 (54%), Gaps = 16/217 (7%)
Query: 40 LMYVPMVRKGKPEAPAVEVHVHEARLGEAPDT-----GDSDSGMHSPDAIMNIVKATDFA 94
L+ P R P P H A P T G+SD + +++ DFA
Sbjct: 32 LIRTPPARSFTPTPPLS--RSHSANGSPTPATPGRLPGESDLSL--------LLRTLDFA 81
Query: 95 SHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIE 154
+ KH QRRKD + +PYI HP++VA+ L+ G +++ V+ +A+LHDTVEDT TT EEI
Sbjct: 82 ARKHSCQRRKDVDQSPYINHPISVANYLSSTG-ITDVHVLQAAILHDTVEDTCTTIEEIA 140
Query: 155 REFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIERSLP 214
+FG V +VEE TDN + +RK Q+ AP S +A+ VKLADKLHNL I RS P
Sbjct: 141 DQFGIDVARIVEECTDNTSLDGLQRKVEQLRTAPSKSKQAQQVKLADKLHNLESIRRSPP 200
Query: 215 VNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
V W +R YF WA+ V + P+ L L+
Sbjct: 201 VGWGMKRVQAYFIWAKKVTDICGPAHPPLAERLQHLY 237
>gi|381158190|ref|ZP_09867423.1| guanosine polyphosphate synthetase/pyrophosphohydrolase
[Thiorhodovibrio sp. 970]
gi|380879548|gb|EIC21639.1| guanosine polyphosphate synthetase/pyrophosphohydrolase
[Thiorhodovibrio sp. 970]
Length = 195
Score = 139 bits (351), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 102/157 (64%)
Query: 97 KHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIERE 156
KH QRRKD +PYI HP+AVA +L+ G V + ++ +ALLHDTVEDTD T E+E+
Sbjct: 30 KHRHQRRKDAAASPYINHPLAVAWLLSSEGGVRDSDLLAAALLHDTVEDTDATLVELEQS 89
Query: 157 FGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIERSLPVN 216
FGP + ++V E+TD+K + + RK QI HA H+S AK +K+ADK+ N+RDI P
Sbjct: 90 FGPAISALVAEVTDDKSLPKHRRKALQIEHAAHASASAKQLKIADKIANIRDILADPPAG 149
Query: 217 WTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
W ERK +Y +WA V + RG N ++A DA A+
Sbjct: 150 WPLERKLEYLDWAEQVARCCRGINRALDARWDATIAE 186
>gi|338732682|ref|YP_004671155.1| hypothetical protein SNE_A07870 [Simkania negevensis Z]
gi|336482065|emb|CCB88664.1| putative uncharacterized protein [Simkania negevensis Z]
Length = 555
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 104/165 (63%), Gaps = 3/165 (1%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ ++ A +FA+ KH FQ RKD E TPYI HP+ VA + LG++ +P +I+ALLHDT+
Sbjct: 100 LQRLLAAVEFAADKHQFQIRKDAEKTPYIIHPLGVAQLTLELGELKDPDALIAALLHDTI 159
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+TT EE+E+ FGP V ++V +LT + + K QI HAPH +AK++KLAD+
Sbjct: 160 EDTETTPEEVEQLFGPHVLALVLDLTKPAGLKGEACKLAQIAHAPHMHEQAKIIKLADRY 219
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELD 248
+N+ D+ + W ++ Y W + Q LRGT+ +E +D
Sbjct: 220 YNMCDLAN---IIWDQKSIDAYILWGAKLAQVLRGTSPQLEKAID 261
>gi|183233007|ref|XP_653866.2| metal-dependent phosphohydrolase [Entamoeba histolytica HM-1:IMSS]
gi|169801783|gb|EAL48480.2| metal-dependent phosphohydrolase, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449706450|gb|EMD46293.1| metal-dependent phosphohydrolase, putative [Entamoeba histolytica
KU27]
Length = 223
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 104/176 (59%), Gaps = 4/176 (2%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +FA+HKH FQ RKD GT YIEHP+ V IL G +++ ++ ALLHDTVEDT
Sbjct: 26 FLSVLEFATHKHRFQLRKD--GTAYIEHPIKVCKILKDAG-INDIEILSGALLHDTVEDT 82
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTTFEE+E FG ++ V E TD+K + + RK+ QI H+ S+ K++K ADK+HN+
Sbjct: 83 DTTFEELEEHFGKQITQYVREATDDKKLDKVTRKKLQIEHSKTISYGGKMIKYADKIHNM 142
Query: 207 RDIERSLPVNWTEERKTQ-YFNWARDVVQGLRGTNAPIEAELDALFAKYCTPREGR 261
I ++P + Q Y W + V + RG N ++++ D + + T G+
Sbjct: 143 GSIISTVPCPFKPYEVAQGYMVWGKKVCEAFRGINGVLDSQFDEILKGHITDNNGK 198
>gi|188582449|ref|YP_001925894.1| metal dependent phosphohydrolase [Methylobacterium populi BJ001]
gi|179345947|gb|ACB81359.1| metal dependent phosphohydrolase [Methylobacterium populi BJ001]
Length = 186
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/165 (40%), Positives = 97/165 (58%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +++A DFA+ +H Q RK PY+ H VA +L + + ++ + LHDT+
Sbjct: 12 VAFVMRAADFAARRHAAQHRKGSAREPYVNHLAEVASLLAEAAREPDAALVAAGWLHDTL 71
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT T E+ER FGP V +V E+TD+K + + ERKR Q+ AP S A+ +K+ADK
Sbjct: 72 EDTPTDRAELERLFGPAVADLVAEVTDDKSLPKAERKRRQVETAPRKSAGARAIKIADKT 131
Query: 204 HNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELD 248
NLR + S P W +R Y +WA +VV G RGTNA +E+ D
Sbjct: 132 SNLRSLAASPPEGWERKRIADYVDWAEEVVAGCRGTNAALESLFD 176
>gi|86748925|ref|YP_485421.1| metal dependent phosphohydrolase [Rhodopseudomonas palustris HaA2]
gi|86571953|gb|ABD06510.1| metal dependent phosphohydrolase [Rhodopseudomonas palustris HaA2]
Length = 178
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 95/158 (60%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A DFA+ H QRRK PY+ H VA +L S+ ++ + LHDTVED+
Sbjct: 7 VSRAADFAARCHAGQRRKGAAKEPYVNHLAEVAELLAVATDGSDAALVAAGWLHDTVEDS 66
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
TT +E+ +FG V ++V E TD+K + + ERKR QI HAPH S A++VKLADK+ NL
Sbjct: 67 GTTRDELIEQFGDDVAALVIECTDDKTLPKAERKRLQIEHAPHLSGRARMVKLADKISNL 126
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIE 244
R + S P +W ER Y +WA VV G RG N +E
Sbjct: 127 RSLIFSPPDDWERERLIDYLDWADRVVAGCRGVNGYLE 164
>gi|167379663|ref|XP_001735229.1| HD domain-containing protein [Entamoeba dispar SAW760]
gi|165902870|gb|EDR28585.1| HD domain-containing protein, putative [Entamoeba dispar SAW760]
Length = 205
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 4/176 (2%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +FA+HKH FQ RKD G YIEHP+ V IL G +++ ++ ALLHDTVEDT
Sbjct: 8 FLSVLEFATHKHRFQLRKD--GASYIEHPIKVCKILKDAG-INDIEILSGALLHDTVEDT 64
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
+TTFEE+E FG ++ V E+TD+K + + RK+ QI H+ S+ K++K ADK+ N+
Sbjct: 65 NTTFEELEEHFGKQITQYVREVTDDKKLDKVTRKKLQIEHSGTISYGGKMIKYADKIQNM 124
Query: 207 RDIERSLPVNWTEERKTQ-YFNWARDVVQGLRGTNAPIEAELDALFAKYCTPREGR 261
I ++P + Q Y W + V + RG N+ ++ + D + T G+
Sbjct: 125 GSIISTVPCPFKPYEVAQGYMVWGKKVSEAFRGINSILDKQFDEILKGNITDDNGK 180
>gi|401884799|gb|EJT48941.1| hypothetical protein A1Q1_01977 [Trichosporon asahii var. asahii
CBS 2479]
gi|406694371|gb|EKC97699.1| hypothetical protein A1Q2_08011 [Trichosporon asahii var. asahii
CBS 8904]
Length = 274
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 94/165 (56%), Gaps = 10/165 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+++ DFA+ KH QRRKD + TPYI HP+AVA+IL+ G V++ V+ +A+LHDT
Sbjct: 70 LLRTIDFAAFKHQCQRRKDLDQTPYINHPIAVANILSSTG-VTDIKVLQAAVLHDT---- 124
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
EIE FG V +V E TDN + ERK Q+ AP S EA+ VKLADKLHNL
Sbjct: 125 -----EIEETFGADVARIVGECTDNTELNGLERKLEQLRTAPFRSREAQQVKLADKLHNL 179
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
I R PV W R YF WA+ V N + +L L+
Sbjct: 180 ESIRRCPPVGWGVRRIQAYFQWAKQVTDVCAPANPALARKLQTLY 224
>gi|380806817|gb|AFE75284.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1,
partial [Macaca mulatta]
Length = 100
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 79/100 (79%)
Query: 103 RKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVR 162
RKDPEGTPYI HP+ VA ILTH +++ VV+ +ALLHDTVEDTDTT +E+E FG +VR
Sbjct: 1 RKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDTTLDEVELHFGAQVR 60
Query: 163 SVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADK 202
+VEE+TD+K + + ERKR Q+ APHSS AKLVKLADK
Sbjct: 61 RLVEEVTDDKTLPKLERKRLQVEQAPHSSPGAKLVKLADK 100
>gi|115525731|ref|YP_782642.1| metal dependent phosphohydrolase [Rhodopseudomonas palustris
BisA53]
gi|115519678|gb|ABJ07662.1| metal dependent phosphohydrolase [Rhodopseudomonas palustris
BisA53]
Length = 178
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 95/167 (56%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A DFA+ +H RRK PY+ H VA +LT ++ ++ + LHDT+EDT
Sbjct: 7 VSRAADFAARRHAGTRRKGAAKEPYVNHLAEVALLLTVATSGTDAPLVAAGWLHDTIEDT 66
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
+ +E+ F V S+V E TD+K + + ERKR QI HAPH + A+++KLADK+ NL
Sbjct: 67 GVSRDELAEMFSEDVASLVVECTDDKTLPKAERKRLQIEHAPHLTKRARMIKLADKISNL 126
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
R + S P +W ER Y +WA V G RG N +E D A+
Sbjct: 127 RSLILSPPDDWERERLIDYLDWAEKVAAGCRGVNEHLEILFDETAAR 173
>gi|39936723|ref|NP_948999.1| metal dependent phosphohydrolase [Rhodopseudomonas palustris
CGA009]
gi|39650579|emb|CAE29102.1| Metal dependent phosphohydrolase [Rhodopseudomonas palustris
CGA009]
Length = 178
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 95/167 (56%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A DFA+ +H RRK + PY+ H VA +LT ++ ++ + LHDT+EDT
Sbjct: 7 VSRAADFAARRHAGTRRKGADKEPYVNHLAEVALLLTVATDGADAPLVAAGWLHDTIEDT 66
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T +E+ +F V +V TD+K + + ERKR QI HAPH + AKL+KLADK+ NL
Sbjct: 67 GVTRDELAEQFSADVAELVVACTDDKTLPKVERKRLQIEHAPHLTPRAKLIKLADKISNL 126
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
R + S P +W +R Y +WA V G RG N +E D A+
Sbjct: 127 RSLIVSPPDDWERDRLLDYLDWAEKVAAGCRGVNDHLENLFDETAAR 173
>gi|365897072|ref|ZP_09435105.1| putative metal-dependent phosphohydrolase [Bradyrhizobium sp. STM
3843]
gi|365422185|emb|CCE07647.1| putative metal-dependent phosphohydrolase [Bradyrhizobium sp. STM
3843]
Length = 179
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 99/172 (57%), Gaps = 18/172 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A + A+ +H Q+RK G PYI H VA++L+ + ++ + LHDT+EDT
Sbjct: 8 VSEAAELAARRHLGQQRKGRSGEPYINHLAEVANLLSVASNGEDAELVAAGWLHDTIEDT 67
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTT +E+ + FG RV +VEE+TD+ + + ER++ Q+L AP S AK +K+ADK+ N+
Sbjct: 68 DTTHDELAQRFGLRVAGLVEEVTDDMTLAKSERRQLQVLEAPKKSDGAKQIKIADKISNI 127
Query: 207 R-------DIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
R D E+ L + Y WA VV G RG N A+LDALF
Sbjct: 128 RARIFFEPDFEQQLEL-------MDYVGWAEQVVAGCRGVN----AQLDALF 168
>gi|154245595|ref|YP_001416553.1| metal dependent phosphohydrolase [Xanthobacter autotrophicus Py2]
gi|154159680|gb|ABS66896.1| metal dependent phosphohydrolase [Xanthobacter autotrophicus Py2]
Length = 202
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 93/162 (57%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+V+A FA+ +H QRRK PY+ H VA +++ + ++ +ALLHD VED
Sbjct: 22 VVRALAFATLRHTDQRRKGRRAQPYVNHLAEVALLVSEATGGQDAALVAAALLHDVVEDQ 81
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
D EIE FG V +V E+TD+K + ERKR Q+ HAPH S AK++KLADK NL
Sbjct: 82 DVAAAEIEATFGSEVAGLVMEVTDDKALEATERKRLQVAHAPHLSARAKVLKLADKTANL 141
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELD 248
R I P +W+ R Y WAR VV+GL G +E+ D
Sbjct: 142 RSIAEDPPQDWSPARARAYVEWARAVVEGLAGACPALESAFD 183
>gi|440300645|gb|ELP93092.1| HD domain containing protein, putative [Entamoeba invadens IP1]
Length = 207
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 101/174 (58%), Gaps = 4/174 (2%)
Query: 88 VKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTD 147
+ A FA+ KH QRRKD G Y+ HP+ V+ IL G +++ + +ALLHDTVEDT
Sbjct: 10 IDALLFATVKHQDQRRKD--GVTYLVHPIGVSKILIECG-ITDIKALQAALLHDTVEDTH 66
Query: 148 TTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLR 207
TTFEEIE FG V +V E+TD+K + + RK+ Q+ HA S AK VK ADK+HNL
Sbjct: 67 TTFEEIETTFGKEVSDIVREVTDDKSLPKITRKKLQVEHAKTCSLGAKYVKYADKIHNLN 126
Query: 208 DIERSLPVNWTEERKTQ-YFNWARDVVQGLRGTNAPIEAELDALFAKYCTPREG 260
++ +P + Q YF W+ VV+ +G N ++ + + + T +G
Sbjct: 127 NLITDIPCAFKPYCIAQGYFVWSCKVVESFKGINPMLDQKFNDVLQGKITDDDG 180
>gi|367474843|ref|ZP_09474335.1| putative metal-dependent phosphohydrolase [Bradyrhizobium sp. ORS
285]
gi|365272838|emb|CCD86803.1| putative metal-dependent phosphohydrolase [Bradyrhizobium sp. ORS
285]
Length = 179
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 102/181 (56%), Gaps = 18/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A + A+ +H Q+RK + PYI H VA+IL ++ ++ + LHDT+EDT
Sbjct: 8 VSEAAELAARRHAGQQRKGRDEEPYINHLAEVANILAATTDGADAELVAAGWLHDTIEDT 67
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTT +E+ + FG RV +VEE+TD+ + + ER+ Q++ AP S AK +K+ADK+ N+
Sbjct: 68 DTTRDELAQRFGARVAGLVEEVTDDMTLPKSERRAVQVIAAPGKSAGAKQIKIADKISNI 127
Query: 207 R-------DIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCTPRE 259
R D+E+ L V +Y WA VV G RG N A LDALF + T
Sbjct: 128 RARIFFEPDLEQQLEV-------MEYVGWAEQVVAGCRGVN----ARLDALFDETVTNAR 176
Query: 260 G 260
G
Sbjct: 177 G 177
>gi|365891179|ref|ZP_09429631.1| putative metal-dependent phosphohydrolase [Bradyrhizobium sp. STM
3809]
gi|365332872|emb|CCE02162.1| putative metal-dependent phosphohydrolase [Bradyrhizobium sp. STM
3809]
Length = 175
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 102/181 (56%), Gaps = 18/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A + A+ +H Q+RK + PY+ H VA+IL ++ ++ + LHDT+EDT
Sbjct: 4 VSEAAELAARRHAGQQRKGRDEEPYVNHLAEVANILAATTDGADAELVAAGWLHDTIEDT 63
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTT +E+ + FG RV +VEE+TD+ + + ER+ Q++ AP S AK +K+ADK+ N+
Sbjct: 64 DTTRDELAQRFGARVAGLVEEVTDDMTLPKSERRAVQVIAAPAKSDGAKQIKIADKISNI 123
Query: 207 R-------DIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCTPRE 259
R D+E+ L + +Y WA VV G RG N A LDALF + T
Sbjct: 124 RARVFFEPDLEQQLEL-------MEYVGWAEQVVAGCRGVN----ARLDALFDETVTNAR 172
Query: 260 G 260
G
Sbjct: 173 G 173
>gi|407768085|ref|ZP_11115464.1| metal dependent phosphohydrolase [Thalassospira xiamenensis M-5 =
DSM 17429]
gi|407288798|gb|EKF14275.1| metal dependent phosphohydrolase [Thalassospira xiamenensis M-5 =
DSM 17429]
Length = 183
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 96/164 (58%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++K+ DFA+ H QRRK P PYI HP+ V+ ++ ++ V+ +A+LHD +ED
Sbjct: 4 LLKSVDFAARAHRDQRRKGPAHEPYINHPIEVSRLIIECEPHTDEYVLCAAVLHDVIEDC 63
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T +EI F + +V E++D+K + RDERK QI APH S+ AKLV+LADK+ N+
Sbjct: 64 GATRDEIAACFNEMIADIVLEVSDDKALPRDERKARQIETAPHLSNGAKLVRLADKVANV 123
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDAL 250
+ PV W E+ +Y +WA V+ R ++ + DA+
Sbjct: 124 GAMLTDTPVGWDREQILRYVDWAEAVIAPCRAVSSGLSDRFDAI 167
>gi|192292549|ref|YP_001993154.1| metal dependent phosphohydrolase [Rhodopseudomonas palustris TIE-1]
gi|192286298|gb|ACF02679.1| metal dependent phosphohydrolase [Rhodopseudomonas palustris TIE-1]
Length = 178
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 93/167 (55%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A DFA+ +H RRK + PY+ H VA +LT ++ ++ + LHDT+EDT
Sbjct: 7 VSRAADFAARRHAGTRRKGADKEPYVNHLAEVALLLTVATDGADAPLVAAGWLHDTIEDT 66
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T +E+ F V +V TD+K + + ERKR QI APH + AKL+KLADK+ NL
Sbjct: 67 GVTRDELAELFSADVAELVVACTDDKTLPKAERKRLQIEQAPHLAPRAKLIKLADKISNL 126
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
R + S P +W +R Y +WA V G RG N +E D A+
Sbjct: 127 RSLIVSPPDDWERDRLLDYLDWAEKVAAGCRGVNDHLENLFDETAAR 173
>gi|146338142|ref|YP_001203190.1| metal-dependent phosphohydrolase [Bradyrhizobium sp. ORS 278]
gi|146190948|emb|CAL74953.1| Putative metal-dependent phosphohydrolase [Bradyrhizobium sp. ORS
278]
Length = 175
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 102/181 (56%), Gaps = 18/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A + A+ +H Q+RK + PY+ H VA+IL ++ ++ + LHDT+EDT
Sbjct: 4 VSEAAELAARRHAGQQRKGRDEEPYVNHLAEVANILAATTDGADAELVAAGWLHDTIEDT 63
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTT +E+ + FG RV +VEE+TD+ + + ER+ Q++ AP S AK +K+ADK+ N+
Sbjct: 64 DTTRDELAQRFGARVAGLVEEVTDDMTLPKSERRAVQVIAAPAKSDGAKQIKIADKISNI 123
Query: 207 R-------DIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCTPRE 259
R D+E+ L + +Y WA VV G RG N A LDALF + +
Sbjct: 124 RARVFFEPDLEQQLEL-------MEYVGWAEQVVAGCRGVN----ARLDALFDETVSNAR 172
Query: 260 G 260
G
Sbjct: 173 G 173
>gi|365880469|ref|ZP_09419836.1| putative metal-dependent phosphohydrolase [Bradyrhizobium sp. ORS
375]
gi|365291454|emb|CCD92367.1| putative metal-dependent phosphohydrolase [Bradyrhizobium sp. ORS
375]
Length = 179
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 102/181 (56%), Gaps = 18/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A + A+ +H Q+R+ + PYI H VA+IL ++ ++ + LHDT+EDT
Sbjct: 8 VSEAAELAARRHAGQQREGRDEEPYINHLAEVANILASTTDGADAELVAAGWLHDTIEDT 67
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTT +E+ + FG RV +VEE+TD+ + + ER+ Q++ AP S AK +K+ADK+ N+
Sbjct: 68 DTTRDELAQRFGARVAGLVEEVTDDMTLPKSERRAVQVIAAPGKSAGAKQIKIADKISNI 127
Query: 207 R-------DIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCTPRE 259
R D+E+ L + +Y WA VV G RG N +LDALF + T
Sbjct: 128 RARVFFEPDLEQQLEL-------MEYVGWAEQVVAGCRGVN----EKLDALFDETVTNAR 176
Query: 260 G 260
G
Sbjct: 177 G 177
>gi|407045103|gb|EKE43008.1| metal-dependent phosphohydrolase, putative [Entamoeba nuttalli P19]
Length = 141
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 83/123 (67%), Gaps = 3/123 (2%)
Query: 92 DFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFE 151
+FA+HKH FQ RKD GT YIEHP+ V IL G +++ ++ ALLHDTVEDTDTTFE
Sbjct: 13 EFATHKHRFQLRKD--GTAYIEHPIKVCKILRDAG-INDIEILSGALLHDTVEDTDTTFE 69
Query: 152 EIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIER 211
E+E FG ++ V E TD+K + + RK+ QI H+ S+ K++K ADK+HN+ I
Sbjct: 70 ELEEHFGKQITQYVREATDDKKLDKVTRKKLQIEHSKTISYGGKMIKYADKIHNMGSIIS 129
Query: 212 SLP 214
++P
Sbjct: 130 TIP 132
>gi|456358110|dbj|BAM92555.1| putative metal-dependent phosphohydrolase [Agromonas oligotrophica
S58]
Length = 179
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 97/172 (56%), Gaps = 18/172 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A + A+ +H ++RK + PYI H VA+IL+ + ++ + LHDT+EDT
Sbjct: 8 VSEAAELAARRHAGRQRKGRDEEPYINHLAEVANILSIASNGEDAELVAAGWLHDTIEDT 67
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTT E+ FG RV +VEE+TD+ + + ER+ Q++ AP S AK +K+ADK+ N+
Sbjct: 68 DTTHAELTERFGARVADMVEEVTDDMTLPKSERRAVQVIAAPGKSDGAKQIKIADKISNI 127
Query: 207 R-------DIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
R D+E+ L + +Y WA VV G RG NA LDALF
Sbjct: 128 RTRVFFEPDLEQQLEL-------MEYLGWAEQVVAGCRGVNAA----LDALF 168
>gi|148258216|ref|YP_001242801.1| metal dependent phosphohydrolase [Bradyrhizobium sp. BTAi1]
gi|146410389|gb|ABQ38895.1| metal dependent phosphohydrolase [Bradyrhizobium sp. BTAi1]
Length = 179
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 97/178 (54%), Gaps = 18/178 (10%)
Query: 81 PDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLH 140
P + + +A + A+ +H Q+RK + PY+ H VA +L ++ ++ + LH
Sbjct: 2 PTGLRLVSEAAELAARRHAGQQRKGRDEEPYVNHLAEVASVLAATSDGADAELVAAGWLH 61
Query: 141 DTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLA 200
D +EDTDTT +E+ + FG RV +VEE+TD+ + + ER+ Q++ AP S AK +K+A
Sbjct: 62 DIIEDTDTTADELTQRFGARVAGLVEEVTDDMTLPKSERRAVQVIAAPGKSAGAKQIKIA 121
Query: 201 DKLHNLR-------DIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
DK+ N+R D+E+ L + +Y WA VV G RG N LD LF
Sbjct: 122 DKISNIRARIFFEPDLEQQLEL-------MEYLGWAEQVVAGCRGVN----PRLDTLF 168
>gi|118777168|ref|XP_307638.3| Anopheles gambiae str. PEST AGAP012646-PA [Anopheles gambiae str.
PEST]
gi|116132993|gb|EAA03439.3| AGAP012646-PA [Anopheles gambiae str. PEST]
Length = 114
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/106 (53%), Positives = 77/106 (72%), Gaps = 1/106 (0%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
+ I K +FA+ KH QRR D + TPYI HP+ VA+ILT G +++ V+ +A+LHD
Sbjct: 9 NCITIYTKCINFAAIKHRNQRRLDSDETPYINHPIGVAYILTEAG-ITDLEVLQAAILHD 67
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHA 187
TVEDTDT+FEEIE FGP VR++V+E+TD+K + + ERKR QI HA
Sbjct: 68 TVEDTDTSFEEIESLFGPTVRAIVQEVTDDKSLPKQERKRLQIEHA 113
>gi|407772668|ref|ZP_11119970.1| metal dependent phosphohydrolase [Thalassospira profundimaris
WP0211]
gi|407284621|gb|EKF10137.1| metal dependent phosphohydrolase [Thalassospira profundimaris
WP0211]
Length = 204
Score = 113 bits (282), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 92/164 (56%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++K+ DFA+ H QRRK PYI HP+ V+ ++ ++ ++ +A+LHD +ED
Sbjct: 24 LLKSVDFAARAHRDQRRKGAAQEPYINHPIEVSRLIVECEPGTDEDILCAAVLHDVIEDC 83
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T +EI F + +V E++D+K + RDERK QI AP ++ AKLV+LADK+ N+
Sbjct: 84 GATRDEIAACFNDIIADIVLEVSDDKALPRDERKAKQIETAPSLTNGAKLVRLADKVANV 143
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDAL 250
+ PV W E + Y +WA V+ R + + DA+
Sbjct: 144 GAMLTDTPVGWDERQILAYVDWAEAVIAPCREVSEGLSERFDAI 187
>gi|386400178|ref|ZP_10084956.1| guanosine polyphosphate synthetase/pyrophosphohydrolase
[Bradyrhizobium sp. WSM1253]
gi|385740804|gb|EIG61000.1| guanosine polyphosphate synthetase/pyrophosphohydrolase
[Bradyrhizobium sp. WSM1253]
Length = 179
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 92/162 (56%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A + A+ +H+ RK PYI H VA++L ++ ++ + LHD +EDT
Sbjct: 8 VSEAAELAARRHNGMARKGRGHEPYINHLAEVANLLATATDGADAELVAAGWLHDAIEDT 67
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTT EE+ ++F RV S+VEE TD+ + + ER+R Q+L AP S A+L+K+ADK+ N+
Sbjct: 68 DTTREELAQKFSDRVASLVEECTDDMSLPKPERRRRQVLDAPKKSAGARLIKIADKISNI 127
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELD 248
S P + Y +WA VV G RG N+ ++ D
Sbjct: 128 GARVHSDPTAEERDDLVDYTDWAEQVVAGCRGGNSWLDTTFD 169
>gi|374572815|ref|ZP_09645911.1| guanosine polyphosphate synthetase/pyrophosphohydrolase
[Bradyrhizobium sp. WSM471]
gi|374421136|gb|EHR00669.1| guanosine polyphosphate synthetase/pyrophosphohydrolase
[Bradyrhizobium sp. WSM471]
Length = 179
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 93/164 (56%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A + A+ +H+ RK PYI H VA++L ++ ++ + LHD +EDT
Sbjct: 8 VSEAAELAARRHNGMTRKGRGHEPYINHLAEVANLLATATDGADAELVAAGWLHDAIEDT 67
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
DTT EE+ ++F RV S+V+E TD+ + + ER+R Q+L AP S A+L+K+ADK+ N+
Sbjct: 68 DTTREELAQKFSDRVASLVDECTDDMSLPKPERRRRQVLDAPKKSAGARLIKIADKISNI 127
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDAL 250
S P + Y +WA VV G RG N+ ++ D +
Sbjct: 128 GARVHSDPTAEERDDLVDYTDWAEQVVAGCRGANSWLDMTFDDM 171
>gi|27376567|ref|NP_768096.1| hypothetical protein blr1456 [Bradyrhizobium japonicum USDA 110]
gi|27349708|dbj|BAC46721.1| blr1456 [Bradyrhizobium japonicum USDA 110]
Length = 179
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 92/166 (55%)
Query: 83 AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDT 142
A+ I +A D A+ +H+ RK PYI H VA++L + ++ + LHD
Sbjct: 4 AVRLISEAADLAARRHNGMARKGRGNEPYINHLAEVANLLATATDGGDAELVAAGWLHDV 63
Query: 143 VEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADK 202
+EDT+TT EE+ ++F R+ S+V E TD+ ++ + ER+R Q++ AP S AKL+K+ADK
Sbjct: 64 IEDTETTREELAQKFSERIASLVVECTDDMNLPKAERRRRQVVDAPKKSAGAKLIKIADK 123
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELD 248
+ N+ S P + Y WA VV G RG N ++ + D
Sbjct: 124 ISNVGARIHSDPTAEERDDLVDYTGWAEQVVAGCRGGNPWLDQKFD 169
>gi|56269502|gb|AAH87302.1| LOC495939 protein [Xenopus laevis]
Length = 82
Score = 105 bits (263), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/74 (64%), Positives = 61/74 (82%)
Query: 178 ERKRCQILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLR 237
ERK+ QI HAPH SH+AKLVKLADKL+NLRD++R P W+EER +YF WA +VV+G+R
Sbjct: 2 ERKKQQIAHAPHCSHKAKLVKLADKLYNLRDLKRCTPEGWSEERVQEYFQWASEVVRGIR 61
Query: 238 GTNAPIEAELDALF 251
GTN+ +EA+LD LF
Sbjct: 62 GTNSILEAKLDHLF 75
>gi|384222055|ref|YP_005613221.1| hypothetical protein BJ6T_83900 [Bradyrhizobium japonicum USDA 6]
gi|354960954|dbj|BAL13633.1| hypothetical protein BJ6T_83900 [Bradyrhizobium japonicum USDA 6]
Length = 179
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 87/162 (53%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A + A+ +H RK + PY H VA+ L ++ ++ + LHD +EDT
Sbjct: 8 ISEAAEVAARRHKSMMRKGRDNEPYANHLAEVANFLAVATNGADAELVAAGWLHDALEDT 67
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
+TT +E+ F RV S+V E TD+ + + ER R Q+ AP S +AKL+K+ADK+ N+
Sbjct: 68 ETTTDELSLRFSDRVASLVIECTDDMSLPKAERWRRQVADAPKKSADAKLIKIADKISNI 127
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELD 248
RS P +Y +WA VV G RG NA ++ D
Sbjct: 128 GARIRSNPTAEQRADLIEYTDWAEQVVAGCRGGNAYLDEMFD 169
>gi|452944533|ref|YP_007500698.1| (p)ppGpp synthetase I, SpoT/RelA [Hydrogenobaculum sp. HO]
gi|452882951|gb|AGG15655.1| (p)ppGpp synthetase I, SpoT/RelA [Hydrogenobaculum sp. HO]
Length = 703
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 99/181 (54%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA DF KH Q RK G PY+ HP+AVA IL +G + +V + LLHD VEDT
Sbjct: 26 INKAIDFIYQKHENQTRKS--GEPYVNHPIAVASILASIGMDYHSIV--AGLLHDVVEDT 81
Query: 147 DTTFEEIEREFGPRVRSVVEELT--DNKHMTRDERKRCQ----ILHAPHSSHEAKLVKLA 200
DTT EEI+REFGP++ S+V+ LT D + E + + +L A ++KLA
Sbjct: 82 DTTVEEIKREFGPQIASLVDGLTKIDKYKFSSKEHAKAENYRKMLFAMSKDVRVIVIKLA 141
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R ++ +P ++ + N D+ + R I+ EL+ L+ KY P
Sbjct: 142 DRLHNMRTLD-YMP----RHKQLEIANETIDIYAPIAHRLGIWSIKKELEDLYLKYTHPE 196
Query: 259 E 259
E
Sbjct: 197 E 197
>gi|325263533|ref|ZP_08130267.1| HD domain protein [Clostridium sp. D5]
gi|324031242|gb|EGB92523.1| HD domain protein [Clostridium sp. D5]
Length = 186
Score = 99.8 bits (247), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 96/177 (54%), Gaps = 14/177 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A FAS H Q RK + PYI HPV VA I+ + ++ +I +A+LHDT+ED
Sbjct: 2 IDEAIAFASRAHEGQFRKGTK-RPYIVHPVEVAEIVGTM--TADDEIICAAILHDTIEDC 58
Query: 147 DTTFEEI-EREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
EEI ++EFG RV S+V + +++K ++ +ERK I H + KL+ LADKL N
Sbjct: 59 AGVTEEILKKEFGERVASIVAQESEDKSLSWEERKGATIRHLGMAPFPVKLIGLADKLSN 118
Query: 206 LRDIERSLPV----NWTEER--KTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCT 256
+RDI+R PV W R W +G+R P E E A F +YCT
Sbjct: 119 MRDIDRDYPVLGDELWKRFRMQSKAAMGW---YYKGIRDVLRP-EFEGAAAFEEYCT 171
>gi|392534675|ref|ZP_10281812.1| metal dependent phosphohydrolase [Pseudoalteromonas arctica A
37-1-2]
Length = 172
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 82/146 (56%), Gaps = 5/146 (3%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++K+ D AS H Q+RK E +PYI H + VA +LT + ++ + +A+LHD +EDT
Sbjct: 7 LIKSLDLASKYHAQQKRKSDE-SPYINHLIEVAVLLTDIAEIDENDELCAAILHDILEDT 65
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
D T EI + G RV +VE LTD+K ++ +ER+ + P S K +KLAD N
Sbjct: 66 DITRGEIYKTCGNRVLELVEALTDDKSLSLEERREETLKMLPSKSISVKRIKLADLCSN- 124
Query: 207 RDIERSLPVNWTEERKTQYFNWARDV 232
++P W+ ERK YF W V
Sbjct: 125 ---ACTIPSGWSPERKVDYFFWLDQV 147
>gi|195953734|ref|YP_002122024.1| (p)ppGpp synthetase I SpoT/RelA [Hydrogenobaculum sp. Y04AAS1]
gi|195933346|gb|ACG58046.1| (p)ppGpp synthetase I, SpoT/RelA [Hydrogenobaculum sp. Y04AAS1]
Length = 703
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 99/181 (54%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA DF KH Q RK G PY+ HP+AVA IL +G + +V + LLHD VEDT
Sbjct: 26 ISKAIDFIYQKHENQTRKS--GEPYVNHPIAVASILASIGMDYHSIV--AGLLHDVVEDT 81
Query: 147 DTTFEEIEREFGPRVRSVVEELT--DNKHMTRDERKRCQ----ILHAPHSSHEAKLVKLA 200
DTT EEI++EFGP++ S+V+ LT D + E + + +L A ++KLA
Sbjct: 82 DTTVEEIKKEFGPQIASLVDGLTKIDKYKFSSKEHAKAENYRKMLFAMSKDVRVIVIKLA 141
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R ++ +P ++ + N D+ + R I+ EL+ L+ KY P
Sbjct: 142 DRLHNMRTLD-YMP----RHKQLEIANETIDIYAPIAHRLGIWSIKKELEDLYLKYTHPE 196
Query: 259 E 259
E
Sbjct: 197 E 197
>gi|334119644|ref|ZP_08493729.1| (p)ppGpp synthetase I, SpoT/RelA [Microcoleus vaginatus FGP-2]
gi|333457806|gb|EGK86427.1| (p)ppGpp synthetase I, SpoT/RelA [Microcoleus vaginatus FGP-2]
Length = 758
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 105/202 (51%), Gaps = 19/202 (9%)
Query: 69 PDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKV 128
PD G + + + D++ I +A +FA H Q RK G PYI HPVAVA IL ++G
Sbjct: 31 PDGGPNPNCSSTDDSL--ICRAFEFARDLHEGQYRK--SGEPYICHPVAVAGILRYMG-- 84
Query: 129 SNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRC 182
N V+I + LHD VEDTD T EEIE+ FG VR +VE +L+ ++ ER
Sbjct: 85 GNNVMIAAGFLHDIVEDTDITLEEIEQRFGAEVRQLVEGVTKLSKFNFSSKTERLAENFR 144
Query: 183 QILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTN 240
++ A +VKLAD+LHN+R +E + +EE++ RD+ L R
Sbjct: 145 RMFLAMAKDIRVIVVKLADRLHNMRTLE-----HLSEEKQRSIALETRDIFAPLANRLGI 199
Query: 241 APIEAELDALFAKYCTPREGRE 262
+ EL+ L KY P RE
Sbjct: 200 GRFKWELEDLAFKYLEPEAYRE 221
>gi|251794651|ref|YP_003009382.1| metal dependent phosphohydrolase [Paenibacillus sp. JDR-2]
gi|247542277|gb|ACS99295.1| metal dependent phosphohydrolase [Paenibacillus sp. JDR-2]
Length = 181
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 85/146 (58%), Gaps = 9/146 (6%)
Query: 85 MNIVK-ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN++ A +FA+ H Q RK G PYI HP VA +L+ VII+ALLHD +
Sbjct: 1 MNVMDVAIEFAATAHQAQYRKGT-GIPYISHPFGVAMLLSSYNYSEE--VIIAALLHDVL 57
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTD-NKHMTRDERKRCQILHAPHSSHEAKLVKLADK 202
EDTDTT +++ FGP + +V+ ++ +K ++ +ERK I P SS E +LV ADK
Sbjct: 58 EDTDTTEQQLTDRFGPEITFIVKGCSEPDKSLSWEERKTHTIESLPSSSLEIRLVACADK 117
Query: 203 LHNLRDIERSL----PVNWTEERKTQ 224
LHNLR ++R P W+ ++ +
Sbjct: 118 LHNLRSMKREFETSGPSFWSRFKRGE 143
>gi|324508294|gb|ADY43504.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
[Ascaris suum]
Length = 212
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 73/101 (72%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I+KA D A+ +H QRR+DP TP+I HP+ VA+ILT+ KV + V I++A+LHD +EDT
Sbjct: 71 IMKAADLAARRHRHQRRRDPAQTPFINHPIGVAYILTNEAKVYDTVTIVAAILHDIIEDT 130
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHA 187
TT++EI+ FG V ++V E T +K ++RD RK+ QI +A
Sbjct: 131 KTTYDEIKEMFGHEVFTIVSECTIDKSLSRDARKKAQIENA 171
>gi|421605015|ref|ZP_16047008.1| metal dependent phosphohydrolase, partial [Bradyrhizobium sp.
CCGE-LA001]
gi|404262876|gb|EJZ28563.1| metal dependent phosphohydrolase, partial [Bradyrhizobium sp.
CCGE-LA001]
Length = 147
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 80/140 (57%), Gaps = 6/140 (4%)
Query: 112 IEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDN 171
I H VA++L ++ ++ + LHD++EDTDTT EE+ + F RV S+V E TD+
Sbjct: 1 INHLAEVANLLAAATDGTDAELVAAGWLHDSIEDTDTTREELAQRFSERVASLVTECTDD 60
Query: 172 KHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL-RDIERSLPVNWTEERK--TQYFNW 228
+ + ER++ QI APH S AKL+K+ADK+ N I+ L EER Y W
Sbjct: 61 MSLPKAERRQKQIDDAPHKSPGAKLIKIADKISNTGARIQTDLTA---EERDDLADYVGW 117
Query: 229 ARDVVQGLRGTNAPIEAELD 248
A VV G RG NA ++ + D
Sbjct: 118 ATQVVAGCRGGNAWLDEKFD 137
>gi|428320218|ref|YP_007118100.1| (p)ppGpp synthetase I, SpoT/RelA [Oscillatoria nigro-viridis PCC
7112]
gi|428243898|gb|AFZ09684.1| (p)ppGpp synthetase I, SpoT/RelA [Oscillatoria nigro-viridis PCC
7112]
Length = 756
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 104/202 (51%), Gaps = 20/202 (9%)
Query: 69 PDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKV 128
PD G + + D++ I +A +FA H Q RK G PYI HPVAVA IL ++G
Sbjct: 31 PD-GGPNQNCSTDDSL--ICRAFEFARDLHEGQYRK--SGEPYICHPVAVAGILRYMG-- 83
Query: 129 SNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRC 182
N V+I + LHD VEDTD T EEIE+ FG VR +VE +L+ ++ ER
Sbjct: 84 GNNVMIAAGFLHDIVEDTDITLEEIEQRFGAEVRQLVEGVTKLSKFNFSSKTERLAENFR 143
Query: 183 QILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTN 240
++ A +VKLAD+LHN+R +E + +EE++ RD+ L R
Sbjct: 144 RMFLAMAKDIRVIVVKLADRLHNMRTLE-----HLSEEKQRSIALETRDIFAPLANRLGI 198
Query: 241 APIEAELDALFAKYCTPREGRE 262
+ EL+ L KY P RE
Sbjct: 199 GRFKWELEDLAFKYLEPEAYRE 220
>gi|17229041|ref|NP_485589.1| (p)ppGpp 3-pyrophosphohydrolase [Nostoc sp. PCC 7120]
gi|17135369|dbj|BAB77915.1| (p)ppGpp 3-pyrophosphohydrolase [Nostoc sp. PCC 7120]
Length = 751
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A DFA HH Q RK G YI HP+AVA +L LG +P +I + LHD VEDT
Sbjct: 44 ICRAFDFAYQLHHGQYRK--SGELYISHPIAVAGLLRDLG--GSPAMIAAGFLHDVVEDT 99
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
D T EEIE FGP V+ +VE +T + +K Q + A +VKLA
Sbjct: 100 DVTIEEIEERFGPEVKQLVEGVTKLSKINFTSKKESQAENFRRMFLAMAQDIRVIVVKLA 159
Query: 201 DKLHNLRDIE 210
D+LHN+R ++
Sbjct: 160 DRLHNMRTLQ 169
>gi|283783177|ref|YP_003373931.1| GTP diphosphokinase [Gardnerella vaginalis 409-05]
gi|283441483|gb|ADB13949.1| GTP diphosphokinase [Gardnerella vaginalis 409-05]
Length = 783
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 76/134 (56%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P+ M+I+ +A D A +H QRRK G PYI HP+AVA IL LG P+V+ S
Sbjct: 36 HHPNEDMSILHRAYDRAVKQHTGQRRK--SGEPYIIHPLAVAQILADLGM--GPIVVASG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE EFG V +V+ +T +M E + + + A
Sbjct: 92 LLHDTVEDTDYTLEECRAEFGDTVAGLVDGVTKISNMEYGESAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 152 VLVVKLADRLHNAR 165
>gi|415709869|ref|ZP_11463448.1| GTP pyrophosphokinase [Gardnerella vaginalis 6420B]
gi|388055871|gb|EIK78756.1| GTP pyrophosphokinase [Gardnerella vaginalis 6420B]
Length = 783
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 76/134 (56%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P+ M+I+ +A D A +H QRRK G PYI HP+AVA IL LG P+V+ S
Sbjct: 36 HHPNEDMSILHRAYDRAVKQHTGQRRK--SGEPYIIHPLAVAQILADLGM--GPIVVASG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE EFG V +V+ +T +M E + + + A
Sbjct: 92 LLHDTVEDTDYTLEECRAEFGDTVAGLVDGVTKISNMEYGESAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 152 VLVVKLADRLHNAR 165
>gi|298253944|ref|ZP_06977531.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Gardnerella vaginalis 5-1]
gi|297532087|gb|EFH71062.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Gardnerella vaginalis 5-1]
Length = 783
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 76/134 (56%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P+ M+I+ +A D A +H QRRK G PYI HP+AVA IL LG P+V+ S
Sbjct: 36 HHPNEDMSILHRAYDRAVKQHTGQRRK--SGEPYIIHPLAVAQILADLGM--GPIVVASG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE EFG V +V+ +T +M E + + + A
Sbjct: 92 LLHDTVEDTDYTLEECRAEFGDTVAGLVDGVTKISNMEYGESAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 152 VLVVKLADRLHNAR 165
>gi|119509915|ref|ZP_01629057.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Nodularia
spumigena CCY9414]
gi|119465381|gb|EAW46276.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Nodularia
spumigena CCY9414]
Length = 756
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 99/199 (49%), Gaps = 18/199 (9%)
Query: 72 GDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNP 131
G++++ DA++ I KA +FA H Q RK G YI HPVAVA +L LG +P
Sbjct: 30 GEAEADRRYSDAVL-IGKAFEFAYQLHEGQYRKS--GELYISHPVAVAGLLRDLG--GSP 84
Query: 132 VVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------IL 185
+I + LHD VEDTD T E+IE FGP VR +VE +T + + Q +
Sbjct: 85 AMIAAGFLHDVVEDTDVTSEQIEEHFGPEVRQLVEGVTKLSKINFTSKTESQAENFRRMF 144
Query: 186 HAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPI 243
A +VKLAD+LHN+R ++ +E + + RD+ L R I
Sbjct: 145 LAMAQDIRVIVVKLADRLHNMRTLQYM-----SESSRRRSAQETRDIFAPLANRLGMWRI 199
Query: 244 EAELDALFAKYCTPREGRE 262
+ EL+ L KY P R+
Sbjct: 200 KWELEDLSFKYLEPEAFRQ 218
>gi|75911185|ref|YP_325481.1| (p)ppGpp synthetase I [Anabaena variabilis ATCC 29413]
gi|75704910|gb|ABA24586.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Anabaena
variabilis ATCC 29413]
Length = 751
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 71/130 (54%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A DFA HH Q RK G YI HP+AVA +L LG +P +I + LHD VEDT
Sbjct: 44 ICRAFDFAYQLHHGQYRK--SGELYISHPIAVAGLLRDLG--GSPAMIAAGFLHDVVEDT 99
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
D T EEIE FGP V+ +VE +T + + Q + A +VKLA
Sbjct: 100 DVTIEEIEERFGPEVKQLVEGVTKLSKINFKSKTESQAENFRRMFLAMAQDIRVIVVKLA 159
Query: 201 DKLHNLRDIE 210
D+LHN+R ++
Sbjct: 160 DRLHNMRTLQ 169
>gi|381179726|ref|ZP_09888574.1| metal dependent phosphohydrolase [Treponema saccharophilum DSM
2985]
gi|380768405|gb|EIC02396.1| metal dependent phosphohydrolase [Treponema saccharophilum DSM
2985]
Length = 178
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/117 (46%), Positives = 72/117 (61%), Gaps = 3/117 (2%)
Query: 93 FASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEE 152
FA+ KH Q+RK E PYI HP+ V ILT G N VI++ +LHDT+EDTDT EE
Sbjct: 10 FATIKHQNQKRKGTE-IPYIVHPMEVMQILTENGCSEN--VIVAGILHDTLEDTDTRPEE 66
Query: 153 IEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDI 209
IE+ FG + ++V+ ++K + ERK+ I + S EAKLV ADKL N R +
Sbjct: 67 IEKRFGKEILAIVQTECEDKSKSWKERKQVFIDSLKNDSLEAKLVCCADKLSNARSM 123
>gi|427731593|ref|YP_007077830.1| RelA/SpoT family (p)ppGpp synthetase [Nostoc sp. PCC 7524]
gi|427367512|gb|AFY50233.1| (p)ppGpp synthetase, RelA/SpoT family [Nostoc sp. PCC 7524]
Length = 797
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 97/196 (49%), Gaps = 19/196 (9%)
Query: 75 DSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVI 134
D HS + + I +A +FA H Q RK G YI HPVAVA +L LG +P +I
Sbjct: 80 DDRRHSDNTL--ICRAFEFAYQLHKGQYRKS--GELYISHPVAVAGLLRDLG--GSPAMI 133
Query: 135 ISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAP 188
+ LHD VEDTD T EEIE+ FGP VR +VE +T + + Q + A
Sbjct: 134 AAGFLHDVVEDTDVTIEEIEQHFGPEVRQLVEGVTKLSKINFKSKTESQAENFRRMFLAM 193
Query: 189 HSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAE 246
+VKLAD+LHN+R ++ +E+ + + RD+ L R I+ E
Sbjct: 194 AQDIRVIVVKLADRLHNMRTLQYM-----SEDSRRRSAQETRDIFAPLANRLGIWRIKWE 248
Query: 247 LDALFAKYCTPREGRE 262
L+ L KY P R+
Sbjct: 249 LEDLAFKYLEPEAFRQ 264
>gi|325294217|ref|YP_004280731.1| (p)ppGpp synthetase I SpoT/RelA [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064665|gb|ADY72672.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 716
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 75/134 (55%), Gaps = 10/134 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I+KA +FA +H Q RK G P+ HP VA+IL L ++ P IIS LLHD VEDT
Sbjct: 23 IIKAYNFAKERHEGQFRKS--GEPFFSHPAEVAYILAEL-RMDTPT-IISGLLHDVVEDT 78
Query: 147 DTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHEAKLVKLA 200
DTT EEIE+EFG V +V+ +T + RD +L + +VKLA
Sbjct: 79 DTTIEEIEKEFGKEVAFIVKGVTKLEGYQFSSKEERDAESFRNLLISLAEDIRVLIVKLA 138
Query: 201 DKLHNLRDIERSLP 214
D+LHN+R +E P
Sbjct: 139 DRLHNMRTMESMKP 152
>gi|429221371|ref|YP_007183015.1| RelA/SpoT family (p)ppGpp synthetase [Deinococcus peraridilitoris
DSM 19664]
gi|429132234|gb|AFZ69249.1| (p)ppGpp synthetase, RelA/SpoT family [Deinococcus peraridilitoris
DSM 19664]
Length = 746
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 100/192 (52%), Gaps = 27/192 (14%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP+ + +A FA H RK G PYI HPV VA IL LG ++ V I+ LL
Sbjct: 8 SPEDQDRVARAYHFAERAHDGVLRK--SGEPYITHPVTVAQILADLGMDTDGV--IAGLL 63
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---------ELTDNKHMTRDERKRCQILHAPHS 190
HDTVEDTD TFE++E++FG VR +VE +++ N H + E R Q+L A
Sbjct: 64 HDTVEDTDVTFEQVEQDFGVVVRRIVEGETKVSKLTKMSSNLHDEQSENLR-QMLIAMTG 122
Query: 191 SHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL-----RGTNAPIEA 245
+VKLAD+LHN+R + S+P + K Q AR+ ++ R I+
Sbjct: 123 DIRVIIVKLADRLHNMRTLA-SMPAH-----KQQRI--ARETLEIFAPLAHRLGIGQIKW 174
Query: 246 ELDALFAKYCTP 257
EL+ L KY P
Sbjct: 175 ELEDLSFKYLDP 186
>gi|320354677|ref|YP_004196016.1| (p)ppGpp synthetase I SpoT/RelA [Desulfobulbus propionicus DSM
2032]
gi|320123179|gb|ADW18725.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfobulbus propionicus DSM
2032]
Length = 701
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 83/159 (52%), Gaps = 22/159 (13%)
Query: 62 EARLGEAPDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHI 121
EA +G PD+ KA DFA H Q R+ G PYI HP +VA I
Sbjct: 16 EAFIGNGPDS-------------QVFWKALDFAFEAHGNQWRR--SGDPYIMHPCSVARI 60
Query: 122 LTHLGKVSNPVVIISALLHDTVEDTDTTFEEIERE-FGPRVRSVVEELTDNKHMTRDERK 180
L + NP ++ +ALLHDTVED + +E+ R+ FGP V ++VE T H T D +
Sbjct: 61 LAEELDIRNPEILAAALLHDTVEDVEEVTDEVIRQRFGPNVEAIVEGCTKVTHYTGDRQT 120
Query: 181 RCQILH-----APHSSHEAKLVKLADKLHNLRDIERSLP 214
+++H + E +VKLAD+LHNLR + S+P
Sbjct: 121 FKKLVHRKIFSGAAAKLEVMIVKLADRLHNLRTLS-SMP 158
>gi|434402920|ref|YP_007145805.1| (p)ppGpp synthetase, RelA/SpoT family [Cylindrospermum stagnale PCC
7417]
gi|428257175|gb|AFZ23125.1| (p)ppGpp synthetase, RelA/SpoT family [Cylindrospermum stagnale PCC
7417]
Length = 756
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 96/192 (50%), Gaps = 19/192 (9%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
HS A+ I +A FA H Q RK G PYI HPVAVA +L LG +P +I +
Sbjct: 38 HSDSAL--ICRAFQFAYQLHQGQYRKS--GEPYIGHPVAVAGLLRDLG--GSPAMIAAGF 91
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHD VEDT+ T ++IE FGP VR +VE +T + + Q + A
Sbjct: 92 LHDVVEDTEVTIDQIEERFGPEVRQLVEGVTKLSKINFKSKTESQAENFRRMFLAMAQDI 151
Query: 193 EAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDAL 250
+VKLAD+LHN+R ++ +P +E++ + RD+ L R + EL+ L
Sbjct: 152 RVIVVKLADRLHNMRTLQ-FMP----DEKRRRIAQETRDIFAPLANRLGIWQFKWELEDL 206
Query: 251 FAKYCTPREGRE 262
KY P R+
Sbjct: 207 AFKYLEPEAFRQ 218
>gi|415723137|ref|ZP_11469311.1| GTP pyrophosphokinase [Gardnerella vaginalis 00703C2mash]
gi|388063587|gb|EIK86156.1| GTP pyrophosphokinase [Gardnerella vaginalis 00703C2mash]
Length = 779
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 75/134 (55%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M+I+ KA A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDENMDILHKAYKRAVKQHTGQRRK--SGEPYIIHPLAVAQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE +FG V +V+ +T +M E + + + A
Sbjct: 92 LLHDTVEDTDYTLEECRADFGDTVAGLVDGVTKISNMEYGESAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 152 VLVVKLADRLHNAR 165
>gi|415722123|ref|ZP_11469011.1| GTP pyrophosphokinase [Gardnerella vaginalis 00703Bmash]
gi|388060287|gb|EIK82986.1| GTP pyrophosphokinase [Gardnerella vaginalis 00703Bmash]
Length = 779
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 75/134 (55%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M+I+ KA A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDENMDILHKAYKRAVKQHTGQRRK--SGEPYIIHPLAVAQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE +FG V +V+ +T +M E + + + A
Sbjct: 92 LLHDTVEDTDYTLEECRADFGDTVAGLVDGVTKISNMEYGESAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 152 VLVVKLADRLHNAR 165
>gi|427706762|ref|YP_007049139.1| (p)ppGpp synthetase I SpoT/RelA [Nostoc sp. PCC 7107]
gi|427359267|gb|AFY41989.1| (p)ppGpp synthetase I, SpoT/RelA [Nostoc sp. PCC 7107]
Length = 756
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 91/184 (49%), Gaps = 17/184 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A FA HH Q RK G PYI HPVAVA +L LG +P +I + LHD VEDT
Sbjct: 43 ICRAFTFAYQLHHGQFRKS--GEPYICHPVAVAGLLRDLG--GSPAMIAAGFLHDVVEDT 98
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
D T EEIE FG VR +VE +T + + Q + A +VKLA
Sbjct: 99 DVTIEEIEELFGSEVRLLVEGVTKLSKINFKSKTESQAENFRRMFLAMAQDIRVIVVKLA 158
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R ++ +E+ + + RD+ L R I+ EL+ L KY P
Sbjct: 159 DRLHNMRTLQYM-----SEDSRRRSAQETRDIFAPLANRLGIWHIKWELEDLAFKYLEPE 213
Query: 259 EGRE 262
R+
Sbjct: 214 AFRQ 217
>gi|410627616|ref|ZP_11338354.1| metal dependent phosphohydrolase [Glaciecola mesophila KMM 241]
gi|410152833|dbj|GAC25123.1| metal dependent phosphohydrolase [Glaciecola mesophila KMM 241]
Length = 282
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 9/156 (5%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
H+P +++ A FAS H Q+RK G PY+ H + V IL SN +I+A+
Sbjct: 104 HTP----SLLSAIRFASLHHASQKRKST-GEPYLNHLIEVTQILQFYESSSNENTLIAAV 158
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVK 198
LHD +EDT+ T + FG V +V ELT + D++K + S+EA+++K
Sbjct: 159 LHDILEDTEVTSIGVNYLFGDEVSKIVLELTCDSATNSDDKKIALLNQVATGSNEARIIK 218
Query: 199 LADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQ 234
LAD + N+ S+P W +RK Y +W V +
Sbjct: 219 LADIISNV----SSIPTLWALDRKIGYIDWCNKVAK 250
>gi|415728245|ref|ZP_11471818.1| GTP pyrophosphokinase [Gardnerella vaginalis 6119V5]
gi|388065383|gb|EIK87874.1| GTP pyrophosphokinase [Gardnerella vaginalis 6119V5]
Length = 783
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 73/134 (54%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M I+ +A A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDEDMTILHRAYSRAVKQHTGQRRK--SGEPYIIHPLAVAQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE EFG V +V+ +T M E + + + A
Sbjct: 92 LLHDTVEDTDYTLEECRAEFGDTVAGLVDGVTKISKMEYGESAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 152 VLVVKLADRLHNAR 165
>gi|415718258|ref|ZP_11467240.1| GTP pyrophosphokinase, partial [Gardnerella vaginalis 1500E]
gi|388060087|gb|EIK82788.1| GTP pyrophosphokinase, partial [Gardnerella vaginalis 1500E]
Length = 771
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 73/134 (54%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M I+ +A A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDEDMTILHRAYSRAVKQHTGQRRK--SGEPYIIHPLAVAQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE EFG V +V+ +T M E + + + A
Sbjct: 92 LLHDTVEDTDYTLEECRAEFGDTVAGLVDGVTKISKMEYGESAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 152 VLVVKLADRLHNAR 165
>gi|415726905|ref|ZP_11471133.1| GTP pyrophosphokinase [Gardnerella vaginalis 00703Dmash]
gi|388062634|gb|EIK85239.1| GTP pyrophosphokinase [Gardnerella vaginalis 00703Dmash]
Length = 783
Score = 90.1 bits (222), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 73/134 (54%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M I+ +A A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDEDMTILHRAYSRAVKQHTGQRRK--SGEPYIIHPLAVAQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE EFG V +V+ +T M E + + + A
Sbjct: 92 LLHDTVEDTDYTLEECRAEFGDTVAGLVDGVTKISKMEYGESAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 152 VLVVKLADRLHNAR 165
>gi|86606590|ref|YP_475353.1| RelA/SpoT family protein [Synechococcus sp. JA-3-3Ab]
gi|86555132|gb|ABD00090.1| RelA/SpoT family protein [Synechococcus sp. JA-3-3Ab]
Length = 760
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 81/154 (52%), Gaps = 11/154 (7%)
Query: 63 ARLGEAPDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL 122
A L A D GD + +A + + +A +FA H Q+RK G PYI HPVAVA +L
Sbjct: 29 ALLSGAEDLGDGLRSYTAEEADL-LRRAFEFAYCLHKGQKRKS--GDPYIAHPVAVASLL 85
Query: 123 THLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRC 182
LG + V + + LLHD VEDT+ T E +E EFGP VR +VE +T +
Sbjct: 86 RELG--GDAVTVAAGLLHDVVEDTEVTLEALEAEFGPEVRLLVEGVTKLSQFNFSSKTEQ 143
Query: 183 Q------ILHAPHSSHEAKLVKLADKLHNLRDIE 210
Q + A +VKLAD+LHN+R ++
Sbjct: 144 QAENFRRMFVAMAKDIRVIVVKLADRLHNMRTLQ 177
>gi|311114509|ref|YP_003985730.1| GTP diphosphokinase [Gardnerella vaginalis ATCC 14019]
gi|310946003|gb|ADP38707.1| GTP diphosphokinase [Gardnerella vaginalis ATCC 14019]
Length = 779
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M I+ KA A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDENMEILHKAYARAVKQHTGQRRK--SGEPYIIHPLAVAQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE +FG V +V+ +T +M E + + + A
Sbjct: 92 LLHDTVEDTDYTLEECRADFGDTVAGLVDGVTKISNMEYGESAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 152 VLVVKLADRLHNAR 165
>gi|385801855|ref|YP_005838258.1| GTP diphosphokinase [Gardnerella vaginalis HMP9231]
gi|417556949|ref|ZP_12208004.1| GTP diphosphokinase [Gardnerella vaginalis 315-A]
gi|333393432|gb|AEF31350.1| GTP diphosphokinase [Gardnerella vaginalis HMP9231]
gi|333601880|gb|EGL13314.1| GTP diphosphokinase [Gardnerella vaginalis 315-A]
Length = 779
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M I+ KA A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDENMEILHKAYARAVKQHTGQRRK--SGEPYIIHPLAVAQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE +FG V +V+ +T +M E + + + A
Sbjct: 92 LLHDTVEDTDYTLEECRADFGDTVAGLVDGVTKISNMEYGESAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 152 VLVVKLADRLHNAR 165
>gi|297243581|ref|ZP_06927512.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Gardnerella vaginalis AMD]
gi|296888332|gb|EFH27073.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Gardnerella vaginalis AMD]
Length = 742
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 73/128 (57%), Gaps = 9/128 (7%)
Query: 85 MNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
M+I+ +A D A +H QRRK G PYI HP+AVA IL LG P+V+ S LLHDTV
Sbjct: 1 MSILHRAYDRAVKQHTGQRRK--SGEPYIIHPLAVAQILADLGM--GPIVVASGLLHDTV 56
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKL 199
EDTD T EE EFG V +V+ +T +M E + + + A +VKL
Sbjct: 57 EDTDYTLEECRAEFGDTVAGLVDGVTKISNMEYGESAQAETIRKMVVAMSRDVRVLVVKL 116
Query: 200 ADKLHNLR 207
AD+LHN R
Sbjct: 117 ADRLHNAR 124
>gi|414079723|ref|YP_007001147.1| RelA/SpoT family protein [Anabaena sp. 90]
gi|413973002|gb|AFW97090.1| RelA/SpoT family protein [Anabaena sp. 90]
Length = 757
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 91/186 (48%), Gaps = 17/186 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A FA H Q RK G PYI HPVAVA IL LG +P +I + LLHD VEDT
Sbjct: 44 ICRAFQFAYELHGGQIRKS--GEPYIAHPVAVAEILRELG--GSPAMIAAGLLHDVVEDT 99
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
+ T E+IE FG VR +VE +T + + Q + A +VKLA
Sbjct: 100 EVTSEDIEARFGAEVRLLVEGVTKLSKINFTSKTESQAENFRRMFLAMAQDIRVIVVKLA 159
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R ++ +E + + RD+ L R I+ EL+ L KY P
Sbjct: 160 DRLHNMRTLQYM-----SEASRQRSAQETRDIFAPLANRLGIWQIKWELEDLAFKYLEPE 214
Query: 259 EGRENE 264
RE +
Sbjct: 215 AYRETQ 220
>gi|415702773|ref|ZP_11458919.1| GTP pyrophosphokinase [Gardnerella vaginalis 284V]
gi|415705468|ref|ZP_11460739.1| GTP pyrophosphokinase [Gardnerella vaginalis 75712]
gi|415707427|ref|ZP_11462196.1| GTP pyrophosphokinase [Gardnerella vaginalis 0288E]
gi|415715711|ref|ZP_11466134.1| GTP pyrophosphokinase [Gardnerella vaginalis 1400E]
gi|388052190|gb|EIK75214.1| GTP pyrophosphokinase [Gardnerella vaginalis 75712]
gi|388053319|gb|EIK76310.1| GTP pyrophosphokinase [Gardnerella vaginalis 284V]
gi|388053816|gb|EIK76780.1| GTP pyrophosphokinase [Gardnerella vaginalis 0288E]
gi|388058158|gb|EIK80956.1| GTP pyrophosphokinase [Gardnerella vaginalis 1400E]
Length = 779
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 73/134 (54%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M I+ KA A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDENMEILHKAYARAVKQHTGQRRK--SGEPYIIHPLAVAQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE +FG V +V+ +T M E + + + A
Sbjct: 92 LLHDTVEDTDYTLEECRADFGDTVAGLVDGVTKISKMEYGESAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 152 VLVVKLADRLHNAR 165
>gi|295704523|ref|YP_003597598.1| HD domain-containing protein [Bacillus megaterium DSM 319]
gi|294802182|gb|ADF39248.1| HD domain protein [Bacillus megaterium DSM 319]
Length = 182
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 90/169 (53%), Gaps = 14/169 (8%)
Query: 85 MNIVK-ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
M+++K A +A H H Q RK + TPYI HP+ V +IL G + VI +A LHD V
Sbjct: 1 MSLIKEARRYAEHAHSGQMRKLSD-TPYIVHPINVGNILEKAG--FSEEVIAAAYLHDAV 57
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT+ T EEI + FG V +VE T+NK + +ERK+ I S E K + +ADKL
Sbjct: 58 EDTNVTLEEIVQRFGLEVAGIVEAHTENKSKSWEERKQHTIQIVKTGSLEVKSLIVADKL 117
Query: 204 HNLRDIERSLPVN----WT------EERKTQYFNWARDVVQGLRGTNAP 242
NLR ++ S W E++K Y + ++ QGL + P
Sbjct: 118 DNLRSLKESYDQQGDTIWNSFKRGFEKQKWYYESISKYAAQGLEPSQIP 166
>gi|225569147|ref|ZP_03778172.1| hypothetical protein CLOHYLEM_05227 [Clostridium hylemonae DSM
15053]
gi|225161946|gb|EEG74565.1| hypothetical protein CLOHYLEM_05227 [Clostridium hylemonae DSM
15053]
Length = 178
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 79/132 (59%), Gaps = 8/132 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGT--PYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVE 144
I KA +FA+ H Q RK GT PYI HPV V I++ + K + VI +A+LHDT+E
Sbjct: 2 IDKAIEFATRAHEGQFRK---GTRRPYIVHPVEVGDIVSTMTK--DEEVISAAVLHDTIE 56
Query: 145 DTDTTFEEI-EREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
D + EE+ +EF RV +V + +++K T ERK I H S E +++ LADKL
Sbjct: 57 DCEGITEEVLAKEFSVRVAVMVAQESEDKSKTWVERKGATIRHIGRSPVEVQMIGLADKL 116
Query: 204 HNLRDIERSLPV 215
N+RDI+R PV
Sbjct: 117 SNMRDIDRDYPV 128
>gi|308234770|ref|ZP_07665507.1| GTP diphosphokinase [Gardnerella vaginalis ATCC 14018 = JCM 11026]
Length = 306
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M I+ KA A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDENMEILHKAYARAVKQHTGQRRK--SGEPYIIHPLAVAQILADLG--MGPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE +FG V +V+ +T +M E + + + A
Sbjct: 92 LLHDTVEDTDYTLEECRADFGDTVAGLVDGVTKISNMEYGESAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 152 VLVVKLADRLHNAR 165
>gi|330814148|ref|YP_004358387.1| GTP pyrophosphokinase [Candidatus Pelagibacter sp. IMCC9063]
gi|327487243|gb|AEA81648.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Candidatus Pelagibacter sp. IMCC9063]
Length = 571
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 80/139 (57%), Gaps = 16/139 (11%)
Query: 93 FASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEE 152
FA H Q+R G PYI HPV VA+IL L K+ P I +ALLHDT+EDT TTF+E
Sbjct: 29 FAEQAHISQKR--DSGEPYINHPVEVANILAEL-KLDGPT-ITTALLHDTIEDTGTTFDE 84
Query: 153 IEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
++++FG + +VE +T N+ T E R IL A LVKLAD+LHN
Sbjct: 85 VKKKFGNEIAELVEGVTKLSRLENKNREFTLAENFRKLIL-ATSKDIRVLLVKLADRLHN 143
Query: 206 LRDIERSLPVNWTEERKTQ 224
+R I+ L +EE+K +
Sbjct: 144 MRTIDAVL----SEEKKNR 158
>gi|89070766|ref|ZP_01158024.1| Metal dependent phosphohydrolase [Oceanicola granulosus HTCC2516]
gi|89043665|gb|EAR49871.1| Metal dependent phosphohydrolase [Oceanicola granulosus HTCC2516]
Length = 200
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 76/143 (53%), Gaps = 6/143 (4%)
Query: 101 QRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPR 160
Q RK PYI HP+ VA ++ G + VI++ALLHD VEDT+ +I FG
Sbjct: 34 QVRKGAGQVPYIHHPLEVADLVGADG--AGAPVIVAALLHDVVEDTEIARADIAARFGSE 91
Query: 161 VRSVVEELTDN---KHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNW 217
V ++V+ LTD+ + R RK Q P + EA+ +K+AD++ NLRDI R+ P W
Sbjct: 92 VAALVDALTDDPAWAGLPRPARKARQAEEMPSAPPEARRIKIADQISNLRDIARA-PEAW 150
Query: 218 TEERKTQYFNWARDVVQGLRGTN 240
Y + A VV RG +
Sbjct: 151 DPAEAVTYIDNAERVVDACRGVS 173
>gi|28211806|ref|NP_782750.1| GTP pyrophosphokinase [Clostridium tetani E88]
gi|28204248|gb|AAO36687.1| putative GTP pyrophosphokinase [Clostridium tetani E88]
Length = 731
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 105/188 (55%), Gaps = 17/188 (9%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S + I + KA + A+ H Q+R+ G PYI HPV VA IL +G ++ +V + LL
Sbjct: 14 SNEEIELVKKAYEIANGAHKQQKRES--GEPYIVHPVEVACILADMGMDADTIV--AGLL 69
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHE 193
HD +EDT+ T+E++EREF +V +VE +L K+ +++E++ + L A
Sbjct: 70 HDVIEDTEYTYEDVEREFNKQVADLVEGVTKLGKIKYKSKEEQQADNVRKMLLAMAQDVR 129
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALF 251
L+KLAD+LHN+R + + +PV +E+ + F D+ L R + I+ EL+ L
Sbjct: 130 VILIKLADRLHNMRTL-KYMPVEKQKEKAKETF----DIYAPLAHRLGISKIKWELEDLA 184
Query: 252 AKYCTPRE 259
+Y P E
Sbjct: 185 FRYINPNE 192
>gi|410639517|ref|ZP_11350063.1| metal dependent phosphohydrolase [Glaciecola chathamensis S18K6]
gi|410140836|dbj|GAC08250.1| metal dependent phosphohydrolase [Glaciecola chathamensis S18K6]
Length = 277
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 5/159 (3%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTT 149
A FAS HH ++ G PY+ H + V ++ S+ +I+A+LHD +EDT+ T
Sbjct: 111 AIKFAS-LHHASQKSKSTGEPYVNHLIEVVQLIQRYESSSDENTMIAAVLHDILEDTEVT 169
Query: 150 FEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDI 209
++ FG V +V+ELT N D++K + S+ A+ +KLAD + N+
Sbjct: 170 SIGLKYLFGSEVSKIVQELTCNSADNSDDKKIALLNQISIGSNAAQSIKLADVISNV--- 226
Query: 210 ERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELD 248
SLP W+ +RK Y +W + V + ++ P+ + +
Sbjct: 227 -SSLPSQWSLDRKLAYIDWCKKVAKVCSSSSKPLYDQFN 264
>gi|428297512|ref|YP_007135818.1| (p)ppGpp synthetase I SpoT/RelA [Calothrix sp. PCC 6303]
gi|428234056|gb|AFY99845.1| (p)ppGpp synthetase I, SpoT/RelA [Calothrix sp. PCC 6303]
Length = 758
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 98/203 (48%), Gaps = 18/203 (8%)
Query: 68 APDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGK 127
+ + DS + D + I +A FA H Q RK G PYI HPVAVA +L LG
Sbjct: 26 STEQSDSSDARRTNDTDL-ICRAFIFAYQLHQGQYRKS--GEPYIYHPVAVAGLLRDLG- 81
Query: 128 VSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ---- 183
+P +I + LHD VEDT+ T E+IE +FG VR +VE +T + + Q
Sbjct: 82 -GSPAMIAAGFLHDVVEDTEVTVEDIESKFGEEVRRLVEGVTKLSKINFKSKTEGQAENF 140
Query: 184 --ILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGT 239
+ A +VKLAD+LHN+R +E +EE + + RD+ L R
Sbjct: 141 RRMFLAMAQDIRVIVVKLADRLHNMRTMEVM-----SEESRRRNAQETRDIYAPLANRLG 195
Query: 240 NAPIEAELDALFAKYCTPREGRE 262
+ EL+ L KY P+ RE
Sbjct: 196 IWRFKWELEDLAFKYLEPQSFRE 218
>gi|319789117|ref|YP_004150750.1| (p)ppGpp synthetase I, SpoT/RelA [Thermovibrio ammonificans HB-1]
gi|317113619|gb|ADU96109.1| (p)ppGpp synthetase I, SpoT/RelA [Thermovibrio ammonificans HB-1]
Length = 717
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 75/130 (57%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA +FA KH Q RK G P+ HP VA+IL L ++ P I++ LLHDTVEDT
Sbjct: 23 IEKAYNFAKEKHKGQYRKS--GEPFFSHPAEVAYILAEL-RMDVPT-IVAGLLHDTVEDT 78
Query: 147 DTTFEEIEREFGPRVRSVVEELT--DNKHMTRDERKRCQ----ILHAPHSSHEAKLVKLA 200
DTT EEIEREFG V +V+ +T + T E + +L + +VKLA
Sbjct: 79 DTTIEEIEREFGSEVAFIVKGVTKLEGYRFTSKEEADAESFRNLLISLAEDIRVLIVKLA 138
Query: 201 DKLHNLRDIE 210
D+LHN+R +E
Sbjct: 139 DRLHNMRTLE 148
>gi|317471454|ref|ZP_07930806.1| RelA/SpoT family protein [Anaerostipes sp. 3_2_56FAA]
gi|316901069|gb|EFV23031.1| RelA/SpoT family protein [Anaerostipes sp. 3_2_56FAA]
Length = 904
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 116/240 (48%), Gaps = 23/240 (9%)
Query: 32 ESGPKGLPLMYVPMVRKGKPEAPAVEVHVHEARLGEAPD-----TGDSDSGMHSPDAIMN 86
ES K + L ++PM + K + V+ + + APD ++ ++S + I
Sbjct: 134 ESKLKIINLEWLPMEQNSKTKINRVKKDISNPKSFTAPDELRQQLMETMKSLYSDEDIEM 193
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A D A H Q+RK G PYI HP+ VA IL L + II+ LLHD VEDT
Sbjct: 194 VSRAYDMAFEAHKDQKRK--SGEPYIIHPICVAIILAELE--LDRETIIAGLLHDVVEDT 249
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERK-------RCQILHAPHSSHEAKLVKL 199
D T+E++ REFG V +V+ +T ++ + K ++ A L+KL
Sbjct: 250 DVTYEDVVREFGVEVAQLVDGVTKLGQLSYSKDKIEVQAENLRKMFLAMAKDIRVILIKL 309
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTP 257
AD+LHN+R ++ P E++ + D+ + R + I+ ELD L +Y P
Sbjct: 310 ADRLHNMRTMQFMKP-----EKQKEKSRETMDIYAPIAHRLGISKIKVELDDLSLRYLKP 364
>gi|311029192|ref|ZP_07707282.1| metal dependent phosphohydrolase [Bacillus sp. m3-13]
Length = 183
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 80/134 (59%), Gaps = 5/134 (3%)
Query: 85 MNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN+V KA FA+ H Q RK E PYI HP AV +L +G + VI + ++HDT+
Sbjct: 1 MNLVEKAIVFAAEAHKHQTRKGTE-IPYITHPFAVGMMLQGVG--CSEEVIAAGIIHDTL 57
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDN-KHMTRDERKRCQILHAPHSSHEAKLVKLADK 202
EDT+ T++ + +EFG RV ++V ++N K ++ +ERK+ I +S E V +ADK
Sbjct: 58 EDTEATYDSLVKEFGGRVANLVVAASENDKSLSWEERKQHTINGLKDASMEELQVIVADK 117
Query: 203 LHNLRDIERSLPVN 216
LHNLR I L N
Sbjct: 118 LHNLRSIRADLEEN 131
>gi|354565208|ref|ZP_08984383.1| (p)ppGpp synthetase I, SpoT/RelA [Fischerella sp. JSC-11]
gi|353549167|gb|EHC18609.1| (p)ppGpp synthetase I, SpoT/RelA [Fischerella sp. JSC-11]
Length = 758
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +FA H Q RK G PYI HP+AVA +L LG + +I + LHD VEDT
Sbjct: 45 ICRAFEFAYQLHQGQYRKS--GEPYICHPIAVAGMLRDLG--GSAAMIAAGFLHDVVEDT 100
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
D T EEIE+ FG VR +VE +T + + Q + A +VKLA
Sbjct: 101 DVTIEEIEQRFGSEVRCLVEGVTKLSKINFKSKTESQAENFRRMFLAMAQDIRVIVVKLA 160
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R +E +P EE++ + R++ L R + EL+ L KY P
Sbjct: 161 DRLHNMRTLE-YMP----EEKRRRTATETREIFAPLANRLGIWRFKWELEDLAFKYLEPE 215
Query: 259 EGRE 262
R+
Sbjct: 216 AFRQ 219
>gi|171742655|ref|ZP_02918462.1| hypothetical protein BIFDEN_01769 [Bifidobacterium dentium ATCC
27678]
gi|283456267|ref|YP_003360831.1| GTP pyrophosphokinase/Guanosine
3',5'-bis(Diphosphate)3'-pyrophosphohydrolase
[Bifidobacterium dentium Bd1]
gi|171278269|gb|EDT45930.1| RelA/SpoT family protein [Bifidobacterium dentium ATCC 27678]
gi|283102901|gb|ADB10007.1| relA1 GTP pyrophosphokinase/Guanosine
3',5'-bis(Diphosphate)3'-pyrophosphohydrolase
[Bifidobacterium dentium Bd1]
Length = 774
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 94/185 (50%), Gaps = 12/185 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M I+ +A A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDEDMGILARAYQRAVKQHCTQRRK--SGEPYIIHPLAVAQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE EFG V +V+ +T M + + + + A
Sbjct: 92 LLHDTVEDTDYTLEECRAEFGDTVSGLVDGVTKLSKMEYGDSAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
+VKLAD++HN R P N +++ + + + L G NA I+ EL+ L K
Sbjct: 152 VLVVKLADRVHNARTWRYVKPSN-AQKKAHETLDVYAPLANRL-GMNA-IKTELEELSFK 208
Query: 254 YCTPR 258
P+
Sbjct: 209 VLYPK 213
>gi|306822532|ref|ZP_07455910.1| GTP diphosphokinase [Bifidobacterium dentium ATCC 27679]
gi|309801391|ref|ZP_07695518.1| GTP diphosphokinase [Bifidobacterium dentium JCVIHMP022]
gi|304554077|gb|EFM41986.1| GTP diphosphokinase [Bifidobacterium dentium ATCC 27679]
gi|308221906|gb|EFO78191.1| GTP diphosphokinase [Bifidobacterium dentium JCVIHMP022]
Length = 774
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 94/185 (50%), Gaps = 12/185 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M I+ +A A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDEDMGILARAYQRAVKQHCTQRRK--SGEPYIIHPLAVAQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE EFG V +V+ +T M + + + + A
Sbjct: 92 LLHDTVEDTDYTLEECRAEFGDTVSGLVDGVTKLSKMEYGDSAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
+VKLAD++HN R P N +++ + + + L G NA I+ EL+ L K
Sbjct: 152 VLVVKLADRVHNARTWRYVKPSN-AQKKAHETLDVYAPLANRL-GMNA-IKTELEELSFK 208
Query: 254 YCTPR 258
P+
Sbjct: 209 VLYPK 213
>gi|415712101|ref|ZP_11464597.1| GTP pyrophosphokinase [Gardnerella vaginalis 55152]
gi|388057328|gb|EIK80160.1| GTP pyrophosphokinase [Gardnerella vaginalis 55152]
Length = 779
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 73/134 (54%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M I+ KA A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDENMEILHKAYARAVKQHTGQRRK--SGEPYIIHPLAVAQILADLGM--GPMVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE +FG V +V+ +T M E + + + A
Sbjct: 92 LLHDTVEDTDYTLEECRADFGDTVAGLVDGVTKISKMEYGESAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 152 VLVVKLADRLHNAR 165
>gi|220907977|ref|YP_002483288.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7425]
gi|219864588|gb|ACL44927.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7425]
Length = 748
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 94/182 (51%), Gaps = 16/182 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A +FA H QRR G PYI HPVAVA +L LG + ++ + LHD +EDT
Sbjct: 40 VCRAFNFAYRLHQGQRRA--SGEPYIAHPVAVAGLLRDLG--GSAAMVAAGFLHDVIEDT 95
Query: 147 DTTFEEIEREFGPRVRSVVEELT--DNKHMTRDERKR---CQILHAPHSSHEAKLVKLAD 201
T E++E EFGP VR +VE +T + ++ ER+ ++ A VKLAD
Sbjct: 96 TVTPEQLEAEFGPEVRQLVEGVTKLSKINFSKTERQAESFRRMFLAMAQDIRVIFVKLAD 155
Query: 202 KLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
+LHN+R +E LP EE++ + RDV L R + EL+ L KY P
Sbjct: 156 RLHNMRTLE-YLP----EEKRRRIAQETRDVFAPLANRLGIWRFKWELEDLSFKYLEPEA 210
Query: 260 GR 261
R
Sbjct: 211 YR 212
>gi|153853824|ref|ZP_01995180.1| hypothetical protein DORLON_01171 [Dorea longicatena DSM 13814]
gi|149753574|gb|EDM63505.1| HD domain protein [Dorea longicatena DSM 13814]
Length = 178
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 8/132 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGT--PYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVE 144
I KA +FA+ H Q RK GT PYI HP+ V I++ + + +I +A+LHDT+E
Sbjct: 2 INKAIEFATRAHAGQFRK---GTRRPYIVHPIEVGDIVSTM--TQDEEIISAAVLHDTIE 56
Query: 145 DTDTTFEEI-EREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
D + EI REF RV +V + +++K T ERK I H ++ E ++V LADKL
Sbjct: 57 DCEGVSREILAREFSERVAGIVAQESEDKTKTWMERKSATIEHIRNAPREVQMVGLADKL 116
Query: 204 HNLRDIERSLPV 215
N+RDI+R PV
Sbjct: 117 SNMRDIDRDYPV 128
>gi|428313851|ref|YP_007124828.1| RelA/SpoT family (p)ppGpp synthetase [Microcoleus sp. PCC 7113]
gi|428255463|gb|AFZ21422.1| (p)ppGpp synthetase, RelA/SpoT family [Microcoleus sp. PCC 7113]
Length = 751
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 97/190 (51%), Gaps = 17/190 (8%)
Query: 81 PDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLH 140
PD I I +A +FA H Q R G PYI HPVAVA +L LG S V+I + LH
Sbjct: 34 PDDINLISRAFEFAYKLHEGQLRAS--GEPYIAHPVAVAGLLRDLGGSS--VMIAAGFLH 89
Query: 141 DTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEA 194
D VEDTD T EEIE FG VR +VE +L+ ++ ER+ ++ A +
Sbjct: 90 DVVEDTDVTPEEIESRFGVEVRRLVEGVTKLSKFNFSSKTERQAENFRRMFLAMAADIRV 149
Query: 195 KLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFA 252
+VKLAD+LHN+R +E P +++ R++ L R ++ EL+ L
Sbjct: 150 IVVKLADRLHNMRTLEHLNP-----QKQRSISQETREIFAPLANRLGIGRVKWELEDLAF 204
Query: 253 KYCTPREGRE 262
KY P R+
Sbjct: 205 KYLEPESYRQ 214
>gi|267469|sp|P29941.1|YCB8_PSEDE RecName: Full=Uncharacterized 19.2 kDa protein in cobO 3'region;
AltName: Full=ORF8
gi|94983|pir||H38164 hypothetical protein 8 - Pseudomonas sp
gi|151158|gb|AAA25784.1| ORF8 [Pseudomonas denitrificans]
Length = 175
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 72/131 (54%), Gaps = 6/131 (4%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTT 149
A FA+ H Q+RK +G PYI HP+AVA I+ + P +I +ALLHDTVEDTD T
Sbjct: 17 ALQFATRAHGEQKRK-YDGRPYIVHPIAVAEIVRSVP--HTPEMIAAALLHDTVEDTDAT 73
Query: 150 FEEIEREFGPRVRSVVEELTDNK---HMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
EI+ FGP+V ++V LTD H R RK H + AK VKLAD + N
Sbjct: 74 LLEIKEAFGPKVATLVAWLTDISTPFHGNRQVRKELDRQHLASAPAAAKTVKLADLIDNA 133
Query: 207 RDIERSLPVNW 217
I+ P W
Sbjct: 134 IAIKAGDPNFW 144
>gi|328957461|ref|YP_004374847.1| GTP pyrophosphokinase [Carnobacterium sp. 17-4]
gi|328673785|gb|AEB29831.1| GTP pyrophosphokinase (RelA/SpoT) [Carnobacterium sp. 17-4]
Length = 736
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 93/182 (51%), Gaps = 19/182 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA DFA++ H Q RK G PYI HP+ VA IL L +PV + + LHD VEDT
Sbjct: 28 VKKACDFATNAHKDQFRK--SGEPYIIHPIQVAGILAELK--MDPVTVATGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHEAKLVKLA 200
+ TFE+I REF P V +V+ +T H + ++L A +VKLA
Sbjct: 84 EYTFEDISREFSPEVAMLVDGVTKLGKIKYKSHEEQQAENHRKMLLAMAKDLRVIMVKLA 143
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLR---GTNAPIEAELDALFAKYCTP 257
D+LHNLR ++ P E++ + N +V L G N I+ EL+ +Y P
Sbjct: 144 DRLHNLRTLKFHRP-----EKQRRIANETLEVYAPLAHRLGINL-IKWELEDTSLRYLNP 197
Query: 258 RE 259
++
Sbjct: 198 QQ 199
>gi|22298127|ref|NP_681374.1| GTP pyrophosphokinase [Thermosynechococcus elongatus BP-1]
gi|22294305|dbj|BAC08136.1| GTP pyrophosphokinase [Thermosynechococcus elongatus BP-1]
Length = 752
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/183 (37%), Positives = 92/183 (50%), Gaps = 17/183 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A FA H QRR G PYI HPVAVA IL LG P ++ + LLHD +EDT
Sbjct: 43 VCRAFQFAYDLHQGQRRA--SGEPYIAHPVAVASILRDLG--GGPALLAAGLLHDVIEDT 98
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
T EE+ FG VR +VE +L+ ++ ER+ ++ A +VKLA
Sbjct: 99 AVTAEELAANFGAEVRQLVEGVTKLSKFNFSSKTERQAESFRRMFLAMAQDIRVIVVKLA 158
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R +E LP E+R+ RDV L R I+ EL+ L KY P
Sbjct: 159 DRLHNMRTLE-YLP----EDRRRAIAQETRDVFAPLANRLGIWRIKWELEDLAFKYLEPE 213
Query: 259 EGR 261
R
Sbjct: 214 AYR 216
>gi|163816328|ref|ZP_02207694.1| hypothetical protein COPEUT_02515 [Coprococcus eutactus ATCC 27759]
gi|158448325|gb|EDP25320.1| HD domain protein [Coprococcus eutactus ATCC 27759]
Length = 194
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 87 IVKATDFASHKHHFQRRKDPEG-TPYI-EHPVAVAHILTHLGKVSNPVVIISALLHDTVE 144
I KA D A H Q R+ G PY EH + V +IL ++ + V+++ALLHDTVE
Sbjct: 12 IQKAKDMAKSYHEGQTRRGSAGFVPYYDEHILGVYNILKDECQIDDEEVLVTALLHDTVE 71
Query: 145 DTDTTFEEIEREFGPRVRSVVEELT--DNKHMTRDERKRCQILHAPHSSHEAKLVKLADK 202
DT T E+IER FGP ++ V LT D + + R+ L A + + + LVKLAD+
Sbjct: 72 DTSCTLEDIERAFGPEIKEQVRLLTRIDGEPFSVYARR----LFA-NGTDKTILVKLADR 126
Query: 203 LHNLRDIERSLPVNWTEER-KTQYFNWARDVVQGLRGTNAPIEAELDAL 250
LHNLR I + W +++ K Y + + + ++G + P +++ L
Sbjct: 127 LHNLRTISYMPDIQWIQKKVKQSYTDILNPLHETMKGIDGPYNDKINKL 175
>gi|336436780|ref|ZP_08616490.1| hypothetical protein HMPREF0988_02075 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336006599|gb|EGN36632.1| hypothetical protein HMPREF0988_02075 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 202
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 94/179 (52%), Gaps = 24/179 (13%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT-D 147
+A +FA+ H Q RK + PYI HP+ VA I+T + + +P VI +A+LHDT+ED
Sbjct: 4 EAVEFATKAHEGQFRKGTK-RPYIVHPIEVADIVTTMTR--DPEVICAAVLHDTIEDCAG 60
Query: 148 TTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLR 207
T E +E FG RV +V+ +++K + +ERK I + E +++ LADKL N+R
Sbjct: 61 VTKETLEDRFGERVAMLVDCESEDKSKSWEERKSTTIRRLRTAPREVQMIGLADKLSNMR 120
Query: 208 DIERSLPVN----WTEERKTQ------YFNWARDVVQ-GLRGTNAPIEAELDALFAKYC 255
DI R PV W R Y+ RDV++ +GT A + +YC
Sbjct: 121 DIHRDYPVFGENLWMRFRMQSKAAMGWYYKSIRDVLKSSFQGT---------AAYEEYC 170
>gi|428201543|ref|YP_007080132.1| RelA/SpoT family (p)ppGpp synthetase [Pleurocapsa sp. PCC 7327]
gi|427978975|gb|AFY76575.1| (p)ppGpp synthetase, RelA/SpoT family [Pleurocapsa sp. PCC 7327]
Length = 765
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 74/134 (55%), Gaps = 10/134 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +FA H Q RK G PYI HP+AVA +L LG + +I + LHD VEDT
Sbjct: 49 ICRAFNFAYELHEGQYRKS--GEPYIAHPIAVASLLRDLG--GDKAMIAAGFLHDVVEDT 104
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
D T EEIE FG VR +VE +L+ ++ ER+ ++ A +VKLA
Sbjct: 105 DVTLEEIEERFGAEVRQLVEGVTKLSKFNFSSKTERQAENFRRMFLAMAKDIRVIIVKLA 164
Query: 201 DKLHNLRDIERSLP 214
D+LHN+R +E P
Sbjct: 165 DRLHNMRTLEHLKP 178
>gi|376001755|ref|ZP_09779611.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Arthrospira sp.
PCC 8005]
gi|375329867|emb|CCE15364.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Arthrospira sp.
PCC 8005]
Length = 764
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 74 SDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVV 133
SD+ SPD + I +A FA H Q RK G PYI HP+AVA IL LG S+ +
Sbjct: 33 SDTPSFSPDNDL-ISRAFLFAYQLHKGQYRK--SGEPYINHPIAVAGILRFLG--SDTAM 87
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHA 187
+ + LHD +EDTD T EE+E FGP VR +VE +T + R ++ A
Sbjct: 88 VAAGFLHDIIEDTDVTPEELESHFGPEVRHLVEGVTKLSKFNFSNTTERQAENFRRMFLA 147
Query: 188 PHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEA 245
+VKLAD+LHN+R +E +E ++ R++ L R ++
Sbjct: 148 MAQDIRVIVVKLADRLHNMRTLEF-----MSESKQRSIALETREIFAPLANRLGIGRLKW 202
Query: 246 ELDALFAKYCTPREGRE 262
EL+ L KY P RE
Sbjct: 203 ELEDLAFKYIEPEAYRE 219
>gi|225593179|gb|ACN96096.1| (p)ppGpp synthetase I [Fischerella sp. MV11]
Length = 758
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +FA H Q RK G PYI HP+AVA +L LG + +I + LHD VEDT
Sbjct: 44 ICRAFEFAYQLHQGQYRKS--GEPYICHPIAVAGMLRDLG--GSAAMIAAGFLHDVVEDT 99
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
D T EEIE+ FG VR +VE +T + + Q + A +VKLA
Sbjct: 100 DVTIEEIEQRFGSEVRCLVEGVTKLSKINFKSKTESQAENFRRMFLAMAQDIRVIVVKLA 159
Query: 201 DKLHNLRDIE 210
D+LHN+R +E
Sbjct: 160 DRLHNMRTLE 169
>gi|319901115|ref|YP_004160843.1| (p)ppGpp synthetase I, SpoT/RelA [Bacteroides helcogenes P 36-108]
gi|319416146|gb|ADV43257.1| (p)ppGpp synthetase I, SpoT/RelA [Bacteroides helcogenes P 36-108]
Length = 750
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 94/187 (50%), Gaps = 18/187 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I SALLHD V
Sbjct: 39 ITKAFNFANQAHKGIKRR--SGEPYIMHPIAVAKIVCNEIGLGSTS----ICSALLHDVV 92
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L L+
Sbjct: 93 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 152
Query: 198 KLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCTP 257
K+AD+LHN+R + LP + + +A + G N I+ EL+ L KY P
Sbjct: 153 KIADRLHNMRTLGSMLPNKQFKIAGETLYIYAP--LANRLGLN-KIKTELENLSFKYEHP 209
Query: 258 REGRENE 264
E RE E
Sbjct: 210 EEYREIE 216
>gi|423062390|ref|ZP_17051180.1| (p)ppGpp synthetase I SpoT/RelA [Arthrospira platensis C1]
gi|406716298|gb|EKD11449.1| (p)ppGpp synthetase I SpoT/RelA [Arthrospira platensis C1]
Length = 741
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 74 SDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVV 133
SD+ SPD + I +A FA H Q RK G PYI HP+AVA IL LG S+ +
Sbjct: 10 SDTPSFSPDNDL-ISRAFLFAYQLHKGQYRKS--GEPYINHPIAVAGILRFLG--SDTAM 64
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHA 187
+ + LHD +EDTD T EE+E FGP VR +VE +T + R ++ A
Sbjct: 65 VAAGFLHDIIEDTDVTPEELESHFGPEVRHLVEGVTKLSKFNFSNTTERQAENFRRMFLA 124
Query: 188 PHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEA 245
+VKLAD+LHN+R +E +E ++ R++ L R ++
Sbjct: 125 MAQDIRVIVVKLADRLHNMRTLEF-----MSESKQRSIALETREIFAPLANRLGIGRLKW 179
Query: 246 ELDALFAKYCTPREGRE 262
EL+ L KY P RE
Sbjct: 180 ELEDLAFKYIEPEAYRE 196
>gi|209522975|ref|ZP_03271532.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
gi|209496562|gb|EDZ96860.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
Length = 764
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 74 SDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVV 133
SD+ SPD + I +A FA H Q RK G PYI HP+AVA IL LG S+ +
Sbjct: 33 SDTPSFSPDNDL-ISRAFLFAYQLHKGQYRK--SGEPYINHPIAVAGILRFLG--SDTAM 87
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHA 187
+ + LHD +EDTD T EE+E FGP VR +VE +T + R ++ A
Sbjct: 88 VAAGFLHDIIEDTDVTPEELESHFGPEVRHLVEGVTKLSKFNFSNTTERQAENFRRMFLA 147
Query: 188 PHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEA 245
+VKLAD+LHN+R +E +E ++ R++ L R ++
Sbjct: 148 MAQDIRVIVVKLADRLHNMRTLEF-----MSESKQRSIALETREIFAPLANRLGIGRLKW 202
Query: 246 ELDALFAKYCTPREGRE 262
EL+ L KY P RE
Sbjct: 203 ELEDLAFKYIEPEAYRE 219
>gi|212715656|ref|ZP_03323784.1| hypothetical protein BIFCAT_00556 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212661023|gb|EEB21598.1| hypothetical protein BIFCAT_00556 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 773
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 75/134 (55%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M+I+ +A + A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDEDMSILERAYERAVKQHSSQRRK--SGEPYIIHPLAVAQILADLGM--GPLVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T +E EFG V +V+ +T M + + + + A
Sbjct: 92 LLHDTVEDTDYTLDECRSEFGDTVTGLVDGVTKLSKMEYGDSAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD++HN R
Sbjct: 152 VLVVKLADRVHNAR 165
>gi|182679397|ref|YP_001833543.1| (p)ppGpp synthetase I SpoT/RelA [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182635280|gb|ACB96054.1| (p)ppGpp synthetase I, SpoT/RelA [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 737
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 80/137 (58%), Gaps = 12/137 (8%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
H+ +A +N +A +A H Q+R G PY HP+ VA ILT + K+ + II+A+
Sbjct: 17 HADEAALN--RAYVYAMQAHGLQKRAS--GDPYFSHPLEVAAILTDM-KLDD-ATIIAAV 70
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHDT+EDTD+T EEI+R FGP + +V+ LT K + ++ Q +L A
Sbjct: 71 LHDTIEDTDSTREEIDRLFGPAIGKLVDGLTKLKKLDLVSKRAAQAENFRKLLLAIAEDV 130
Query: 193 EAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 131 RVLLVKLADRLHNMRTL 147
>gi|167759299|ref|ZP_02431426.1| hypothetical protein CLOSCI_01646 [Clostridium scindens ATCC 35704]
gi|336422205|ref|ZP_08602357.1| hypothetical protein HMPREF0993_01734 [Lachnospiraceae bacterium
5_1_57FAA]
gi|167663173|gb|EDS07303.1| HD domain protein [Clostridium scindens ATCC 35704]
gi|336009115|gb|EGN39113.1| hypothetical protein HMPREF0993_01734 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 178
Score = 87.0 bits (214), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/176 (36%), Positives = 92/176 (52%), Gaps = 14/176 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA +FA+ H Q RK + PYI HPV V I+ + + VI +A+LHDT+ED
Sbjct: 2 IDKAIEFATKAHEGQFRKGTK-RPYIVHPVEVGDIVATM--TDDEEVISAAVLHDTIEDC 58
Query: 147 D-TTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
+ T + +EF RV +V + +++K T ERKR I H +S E +++ LADKL N
Sbjct: 59 EGITHRILAQEFSERVAFMVAQESEDKSKTWMERKRATIEHLRTASREVQMIGLADKLSN 118
Query: 206 LRDIERSLPVN----WTEER--KTQYFNWARDVVQGLRGTNAPIEAELDALFAKYC 255
+RDI+R P W R + W +G+R A E+ A F +YC
Sbjct: 119 MRDIDRDYPAEGENLWNRFRMKDKETIGW---YYKGIRDVLADSFKEVPA-FLEYC 170
>gi|331269250|ref|YP_004395742.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium botulinum BKT015925]
gi|329125800|gb|AEB75745.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium botulinum BKT015925]
Length = 730
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 99/181 (54%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I+KA ++A + H Q+R G PYI HPV VA IL +G N I ++LLHD +EDT
Sbjct: 21 IIKAYNYAENAHKEQKR--VSGEPYIIHPVEVACILAEMGLDEN--TIAASLLHDVIEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
D T+E++ER+F V ++VE +L K T++E++ ++L A L+KLA
Sbjct: 77 DYTYEDVERDFNSEVANLVEGVTKLGKIKFKTKEEQQSENVRKMLLAMTKDIRVILIKLA 136
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R ++ T E++ + D+ L R + I+ EL+ L +Y P
Sbjct: 137 DRLHNMRTLKYM-----TVEKQKEKAKETLDIYAPLAHRLGISKIKWELEDLSLRYLNPN 191
Query: 259 E 259
E
Sbjct: 192 E 192
>gi|226322796|ref|ZP_03798314.1| hypothetical protein COPCOM_00568 [Coprococcus comes ATCC 27758]
gi|225208777|gb|EEG91131.1| HD domain protein [Coprococcus comes ATCC 27758]
Length = 178
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA DFA+ H Q RK + PYI HP+ V I++ + + +I +A+LHDT+ED
Sbjct: 2 VQKAIDFATKVHEGQYRKGTD-RPYIVHPMEVGKIVSTM--TQDEEIISAAILHDTIEDC 58
Query: 147 DTTFEEIERE-FGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
+ + +E F RV +V + +++K T ERK I + E +++ LADKL N
Sbjct: 59 EGVDANVLKEMFSARVAGIVSQESEDKSKTWMERKSATIERLKTAPIEVQMIGLADKLSN 118
Query: 206 LRDIERSLPVN----WTEER---KTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCT 256
+RDI+R PV W R K + + V + LR A EA FA+YC+
Sbjct: 119 MRDIDRDYPVCGEELWNRFRMKDKATIGWYYKGVREALREAFAETEA-----FAEYCS 171
>gi|114706256|ref|ZP_01439158.1| Amino acid-binding ACT:Metal dependent phosphohydrolase, HD
region:TGS domain:RelA/SpoT protein:Metal-dependent
[Fulvimarina pelagi HTCC2506]
gi|114538117|gb|EAU41239.1| Amino acid-binding ACT:Metal dependent phosphohydrolase, HD
region:TGS domain:RelA/SpoT protein:Metal-dependent
[Fulvimarina pelagi HTCC2506]
Length = 743
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
+A++N +A +A KH Q+R G PY HP+ VA ILT L + I +ALLHD
Sbjct: 20 EALLN--RAYVYAMQKHGAQKR--ASGDPYFSHPLEVAAILTELRL--DEATIATALLHD 73
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAK 195
T+EDTD T +EI++ FGPR+ +VE LT K + ++ Q +L A
Sbjct: 74 TIEDTDATRKEIDQLFGPRIGQLVEGLTKLKRLDLVSKRAAQAENLRKLLLAIADDIRVL 133
Query: 196 LVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 134 LVKLADRLHNMRTL 147
>gi|218441725|ref|YP_002380054.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7424]
gi|218174453|gb|ACK73186.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7424]
Length = 749
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 93/184 (50%), Gaps = 17/184 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +FA H Q RK G PYI HPVAVA +L LG + +I + LHD VEDT
Sbjct: 43 ICRAFNFAYELHRGQYRKS--GEPYIAHPVAVAGLLRDLG--GDSTMIAAGFLHDVVEDT 98
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
+ T EEIE FG VR +VE +L+ ++ ER+ ++ A +VKLA
Sbjct: 99 EVTLEEIEERFGLEVRQLVEGVTKLSKFNFSSKTERQAENFRRMFLAMAKDIRVIVVKLA 158
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R +E P E++ + R++ L R + EL+ L KY P
Sbjct: 159 DRLHNMRTLEHLAP-----EKQCRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPE 213
Query: 259 EGRE 262
RE
Sbjct: 214 AYRE 217
>gi|210617655|ref|ZP_03291686.1| hypothetical protein CLONEX_03910 [Clostridium nexile DSM 1787]
gi|210149202|gb|EEA80211.1| hypothetical protein CLONEX_03910 [Clostridium nexile DSM 1787]
Length = 189
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 75/134 (55%), Gaps = 4/134 (2%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
D I I KA FA+ H Q RK + PYI HP+ V I+ + + +I +A+LHD
Sbjct: 8 DGIEVIEKAIMFATQAHEGQVRKGTD-RPYIVHPLEVGRIVASM--TEDEEIISAAILHD 64
Query: 142 TVEDTDTTFEE-IEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLA 200
T+ED + EE I REF RV V + +++K T ERK I H + E +++ LA
Sbjct: 65 TIEDCEEITEEVICREFTKRVAEFVAKESEDKSKTWMERKGATIEHLKTACREVQMISLA 124
Query: 201 DKLHNLRDIERSLP 214
DKL N+RDI+R P
Sbjct: 125 DKLSNMRDIDRDYP 138
>gi|387791599|ref|YP_006256664.1| RelA/SpoT family (p)ppGpp synthetase [Solitalea canadensis DSM
3403]
gi|379654432|gb|AFD07488.1| (p)ppGpp synthetase, RelA/SpoT family [Solitalea canadensis DSM
3403]
Length = 737
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 73/133 (54%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H RRK G PYI HP+AVA I LG S I+ ALLHDTV
Sbjct: 38 IRKAFDMALESHKDMRRK--SGEPYIYHPIAVAQICAEEIGLGTTS----IVCALLHDTV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT------DNKHMTRDERKRCQILHAPHSSHEAKLV 197
EDT T E+IEREFG +V S+++ LT D+ + E R +L L+
Sbjct: 92 EDTHMTLEDIEREFGKKVASIIDGLTKIAGVFDHTSSIQAENFRKMLLTLADDVR-VILI 150
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R +E
Sbjct: 151 KLADRLHNMRTME 163
>gi|148284514|ref|YP_001248604.1| spoT-like bifunctional ppGpp synthetase/hydrolase [Orientia
tsutsugamushi str. Boryong]
gi|146739953|emb|CAM79985.1| spoT-like bifunctional ppGpp synthetase/hydrolase [Orientia
tsutsugamushi str. Boryong]
Length = 711
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 77/129 (59%), Gaps = 12/129 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA D+A H H Q R+ G PY HP+ VA I+ + + V +I+ALLHDTVEDT+
Sbjct: 25 KAIDYAIHYHGKQTRE--SGDPYYYHPLHVALIIAQMK--IDTVSVITALLHDTVEDTEL 80
Query: 149 TFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKLAD 201
T +IEREFG V ++V+ +T + H+ + + R ++L A + LVKLAD
Sbjct: 81 TLSDIEREFGKEVATLVDGVTKLAKLRFQSYHLQQAKNFR-KLLLAISNDIRVLLVKLAD 139
Query: 202 KLHNLRDIE 210
+LHN+R IE
Sbjct: 140 RLHNMRTIE 148
>gi|237667442|ref|ZP_04527426.1| RelA/SpoT family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|237655790|gb|EEP53346.1| RelA/SpoT family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 737
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 14/139 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA +FA H Q+R+ G PYI HP+AVA IL LG +N I++ LLHD +EDT
Sbjct: 21 VKKAYNFAKEAHKDQKRE--SGEPYIIHPIAVAEILAELGMDTN--TIVAGLLHDVIEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVE------ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLV 197
D +FE+ R F P V ++V+ +L + ++ T++E++ + L A ++
Sbjct: 77 DCSFEDASRMFNPEVANLVDGVTKLTKLGEMEYKTKEEQQADNVRKMLLAMAKDIRVIII 136
Query: 198 KLADKLHNLRDIERSLPVN 216
KLAD+LHN+R + + +P N
Sbjct: 137 KLADRLHNMRTL-KFMPAN 154
>gi|166033557|ref|ZP_02236386.1| hypothetical protein DORFOR_03283 [Dorea formicigenerans ATCC
27755]
gi|166026742|gb|EDR45499.1| HD domain protein [Dorea formicigenerans ATCC 27755]
Length = 204
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 12/149 (8%)
Query: 76 SGMHSPDAIMN--------IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGK 127
+G D I+N + +A FA+ H Q RK + PYI HP+ V I+ L
Sbjct: 2 TGSEYGDKILNELEKKGQMVARAIAFATKAHEGQFRKGTK-RPYIVHPLEVGEIVATL-- 58
Query: 128 VSNPVVIISALLHDTVEDTD-TTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH 186
+ +I +ALLHDT+ED T E + +EF RV ++V + +++K T ERK I H
Sbjct: 59 TFDEEIISAALLHDTIEDCQGITREVLAQEFSERVAALVAQESEDKSKTWFERKSHTIEH 118
Query: 187 APHSSHEAKLVKLADKLHNLRDIERSLPV 215
++ +E +++ LADKL N+RDI+R PV
Sbjct: 119 LKYAPYEVRMIGLADKLSNIRDIDRDYPV 147
>gi|154488784|ref|ZP_02029633.1| hypothetical protein BIFADO_02091 [Bifidobacterium adolescentis
L2-32]
gi|154082921|gb|EDN81966.1| RelA/SpoT family protein [Bifidobacterium adolescentis L2-32]
Length = 773
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 96/191 (50%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M+I+ +A A ++H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDEDMSILARAYRRAVNQHSSQRRK--SGEPYIIHPLAVAQILADLGM--GPLVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T +E EFG V +V+ +T M + + + + A
Sbjct: 92 LLHDTVEDTDYTLDECRAEFGDTVTGLVDGVTKLSKMEYGDSAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W +++ AR DV L G NA I+ EL
Sbjct: 152 VLVVKLADRVHNAR--------TWRYVKQSNAQKKARETLDVYAPLANRLGMNA-IKTEL 202
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 203 EELSFKVLYPK 213
>gi|189183168|ref|YP_001936953.1| SpoT protein [Orientia tsutsugamushi str. Ikeda]
gi|189179939|dbj|BAG39719.1| SpoT protein [Orientia tsutsugamushi str. Ikeda]
Length = 711
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 77/129 (59%), Gaps = 12/129 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA D+A H H Q R+ G PY HP+ VA I+ + + V +I+ALLHDTVEDT+
Sbjct: 25 KAIDYAIHYHGKQTRE--SGDPYYYHPLHVALIIAQMK--LDTVSVITALLHDTVEDTEL 80
Query: 149 TFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKLAD 201
T +IEREFG V ++V+ +T + H+ + + R ++L A + LVKLAD
Sbjct: 81 TLSDIEREFGKEVATLVDGVTKLAKLRFQSYHLQQAKNFR-KLLLAISNDIRVLLVKLAD 139
Query: 202 KLHNLRDIE 210
+LHN+R IE
Sbjct: 140 RLHNMRTIE 148
>gi|409990716|ref|ZP_11274054.1| (p)ppGpp synthetase I [Arthrospira platensis str. Paraca]
gi|291567306|dbj|BAI89578.1| (p)ppGpp 3-pyrophosphohydrolase [Arthrospira platensis NIES-39]
gi|409938424|gb|EKN79750.1| (p)ppGpp synthetase I [Arthrospira platensis str. Paraca]
Length = 764
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 97/197 (49%), Gaps = 18/197 (9%)
Query: 74 SDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVV 133
SD+ SPD + I +A FA H Q RK G PYI HP+AVA +L LG S+ +
Sbjct: 33 SDTPSFSPDNDL-ISRAFLFAYQLHKGQYRK--SGEPYINHPIAVAGLLRFLG--SDTAM 87
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHA 187
+ + LHD +EDTD T EE+E FGP VR +VE +T + R ++ A
Sbjct: 88 VAAGFLHDIIEDTDVTPEELESNFGPEVRHLVEGVTKLSKFNFSNTTERQAENFRRMFLA 147
Query: 188 PHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEA 245
+VKLAD+LHN+R +E +E ++ R++ L R ++
Sbjct: 148 MAQDIRVIVVKLADRLHNMRTLEF-----MSESKQRSIALETREIFAPLANRLGIGRLKW 202
Query: 246 ELDALFAKYCTPREGRE 262
EL+ L KY P RE
Sbjct: 203 ELEDLAFKYIEPEAYRE 219
>gi|411116988|ref|ZP_11389475.1| (p)ppGpp synthetase, RelA/SpoT family [Oscillatoriales
cyanobacterium JSC-12]
gi|410713091|gb|EKQ70592.1| (p)ppGpp synthetase, RelA/SpoT family [Oscillatoriales
cyanobacterium JSC-12]
Length = 751
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 13/149 (8%)
Query: 68 APDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGK 127
APD S+S + DA + I +A DFA H Q R G PYI HPVAVA +L LG
Sbjct: 28 APDC--SESQIPRADADL-ICRAFDFAYQLHQGQYRA--SGEPYIIHPVAVAGLLRDLGG 82
Query: 128 VSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR--- 181
S V+I + LHD VEDTD T +E+E FG VR++VE +L+ ++ ER+
Sbjct: 83 GS--VMIAAGFLHDVVEDTDVTADELETLFGKEVRTLVEGVTKLSKFNFSSKTERQAENF 140
Query: 182 CQILHAPHSSHEAKLVKLADKLHNLRDIE 210
++ A +VKLAD+LHN+R +E
Sbjct: 141 RRMFLAMAQDIRVIVVKLADRLHNMRTLE 169
>gi|294499182|ref|YP_003562882.1| HD domain-containing protein [Bacillus megaterium QM B1551]
gi|294349119|gb|ADE69448.1| HD domain protein [Bacillus megaterium QM B1551]
Length = 182
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 75/129 (58%), Gaps = 4/129 (3%)
Query: 85 MNIVK-ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
M+++K A +A H H Q RK + TPYI HP+ V +IL G + VI +A LHD V
Sbjct: 1 MSLIKEARRYAEHAHSGQMRKLSD-TPYIVHPINVGNILEKAG--FSEEVIAAAYLHDAV 57
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT T EEI + FG V +VE T+NK + +ERK+ I S E K + +ADKL
Sbjct: 58 EDTSVTLEEIVQRFGLEVAGIVEAHTENKSKSWEERKQHTIQIVKTGSLEVKSLIVADKL 117
Query: 204 HNLRDIERS 212
NLR ++ S
Sbjct: 118 DNLRSLKES 126
>gi|163791111|ref|ZP_02185530.1| GTP pyrophosphokinase [Carnobacterium sp. AT7]
gi|159873583|gb|EDP67668.1| GTP pyrophosphokinase [Carnobacterium sp. AT7]
Length = 370
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA DFA++ H Q RK G PYI HP+ VA IL L +PV + + LHD VEDT+
Sbjct: 30 KACDFATNAHKDQFRKS--GEPYIIHPIQVAGILAELK--MDPVTVATGFLHDVVEDTEY 85
Query: 149 TFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHEAKLVKLADK 202
TFE+I REF P V +V+ +T H + ++L A +VKLAD+
Sbjct: 86 TFEDISREFSPEVAMLVDGVTKLGKIKFKSHEEQQAENHRKMLLAMAKDLRVIMVKLADR 145
Query: 203 LHNLRDIERSLP 214
LHNLR ++ P
Sbjct: 146 LHNLRTLKFHRP 157
>gi|317481107|ref|ZP_07940185.1| HD domain-containing protein, partial [Bacteroides sp. 4_1_36]
gi|316902731|gb|EFV24607.1| HD domain-containing protein [Bacteroides sp. 4_1_36]
Length = 242
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I SALLHD V
Sbjct: 41 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVAKIVCNEIGLGSTS----ICSALLHDVV 94
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L L+
Sbjct: 95 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 154
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 155 KIADRLHNMRTLGSMLP 171
>gi|298291615|ref|YP_003693554.1| (p)ppGpp synthetase I SpoT/RelA [Starkeya novella DSM 506]
gi|296928126|gb|ADH88935.1| (p)ppGpp synthetase I, SpoT/RelA [Starkeya novella DSM 506]
Length = 733
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/178 (35%), Positives = 96/178 (53%), Gaps = 19/178 (10%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q+R G PY HP+ VA ILT L K+ + I++ALLHDT+EDT+T
Sbjct: 25 RAYVYAMRAHGTQKRAS--GDPYFSHPLEVAAILTDL-KLDD-ATIVAALLHDTIEDTET 80
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EEI+R FGP++ ++VE LT K + ++ Q +L A LVKLAD+
Sbjct: 81 TREEIDRIFGPQIGALVEGLTKIKKLDLVSKQAKQAENLRKLLLAIADDVRVLLVKLADR 140
Query: 203 LHNLRDIERSLPVNWT-EERKTQYFNWARDVVQGLRGTNA--PIEAELDALFAKYCTP 257
LHN+R ++ W EE++++ D+ L G + EL+ L + +P
Sbjct: 141 LHNMRTLK------WVPEEKRSRVAQETLDIYAPLAGRMGMHDMREELEDLSFRQLSP 192
>gi|312864406|ref|ZP_07724639.1| GTP diphosphokinase [Streptococcus downei F0415]
gi|311100127|gb|EFQ58338.1| GTP diphosphokinase [Streptococcus downei F0415]
Length = 766
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 16/156 (10%)
Query: 68 APDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGK 127
P+ D +PD + + KA D+A+ H Q+R+ G PYI HP+ VA IL G
Sbjct: 35 GPEVVDLVKTYMTPDDVAIVQKALDYATEAHKTQKRQ--SGEPYIVHPIQVAGILA--GL 90
Query: 128 VSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDE 178
+ V + LHD VEDT+ T E++ER+FG +V +V+ +T + + +
Sbjct: 91 QLDAVTVACGFLHDVVEDTEVTLEDLERDFGLKVSQIVDGVTKLGKVKYKSHEEQLAENH 150
Query: 179 RKRCQILHAPHSSHEAKLVKLADKLHNLRDIERSLP 214
RK +L A LVKLAD+LHN+R ++ P
Sbjct: 151 RK---MLMAMSKDIRVILVKLADRLHNMRTLKHLRP 183
>gi|299821490|ref|ZP_07053378.1| HD domain protein [Listeria grayi DSM 20601]
gi|299817155|gb|EFI84391.1| HD domain protein [Listeria grayi DSM 20601]
Length = 180
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA F H QRRK G PY HP VA IL G ++ V+++ LLHD VEDT
Sbjct: 4 KAKVFIKEAHRGQRRK-ITGEPYFSHPFNVARILQQAGFGTD--VVVAGLLHDVVEDTPI 60
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRD 208
T EEIE EFG V +V T+NK ++ +ERK I + S E K + +ADKL NL
Sbjct: 61 TIEEIETEFGRHVAQLVAAHTENKDLSWEERKAHTIEVVRNGSLEEKAIIVADKLDNLTS 120
Query: 209 IERSL 213
++ +L
Sbjct: 121 VKYAL 125
>gi|168187498|ref|ZP_02622133.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Clostridium
botulinum C str. Eklund]
gi|169294579|gb|EDS76712.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Clostridium
botulinum C str. Eklund]
Length = 729
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 99/181 (54%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I+KA ++A + H Q+R G PYI HPV VA IL +G N I ++LLHD +EDT
Sbjct: 21 IIKAYNYAKNAHKKQKR--ISGEPYIIHPVEVACILAEMGLDEN--TIAASLLHDVIEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
D T+E++ER+F V ++VE +L K T++E++ ++L A L+KLA
Sbjct: 77 DYTYEDVERDFNSEVANLVEGVTKLGKIKFKTKEEQQSENVRKMLLAMTKDIRVILIKLA 136
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R ++ T E++ + D+ L R + ++ EL+ L +Y P
Sbjct: 137 DRLHNMRTLKYM-----TVEKQKEKAKETLDIYAPLAHRLGISKVKWELEDLALRYLNPN 191
Query: 259 E 259
E
Sbjct: 192 E 192
>gi|407784402|ref|ZP_11131551.1| (P)ppGpp synthetase I, SpoT/RelA [Celeribacter baekdonensis B30]
gi|407204104|gb|EKE74085.1| (P)ppGpp synthetase I, SpoT/RelA [Celeribacter baekdonensis B30]
Length = 705
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 80/143 (55%), Gaps = 11/143 (7%)
Query: 79 HSPDAIMNIVK-ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++P N+++ A + H Q R+ G PY HPVAVA ILT + + II+A
Sbjct: 14 YNPKTNANLIREAYAYGREMHEGQFRRS--GEPYFTHPVAVAAILTE--QALDDATIITA 69
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD--NKHMTRDERKRCQ----ILHAPHSS 191
LLHDT+EDT +T+ E+ER+FG V +V+ +T N ++ E K+ + + A
Sbjct: 70 LLHDTIEDTKSTYSEVERKFGTDVAELVDGVTKLTNLQLSSSETKQAENFRKLFMAMSKD 129
Query: 192 HEAKLVKLADKLHNLRDIERSLP 214
LVKLAD+LHN+R I+ P
Sbjct: 130 LRVILVKLADRLHNMRTIKSMRP 152
>gi|332711840|ref|ZP_08431770.1| (p)ppGpp synthetase, RelA/SpoT family [Moorea producens 3L]
gi|332349168|gb|EGJ28778.1| (p)ppGpp synthetase, RelA/SpoT family [Moorea producens 3L]
Length = 754
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 93/181 (51%), Gaps = 17/181 (9%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
D + I +A FA H Q RK G PYI HPVAVA +L LG N +I + LHD
Sbjct: 37 DHTLLIAEAFKFAYQLHQGQSRKS--GEPYIAHPVAVADLLRDLG--GNSTMIAAGFLHD 92
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAK 195
VEDT+ T EEIE FG VR++VE +L+ ++ ER+ ++ A +
Sbjct: 93 VVEDTEITPEEIESRFGVEVRNLVEGVTKLSKFNFSSKTERQAENFRRMFLAMAADIRVI 152
Query: 196 LVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAK 253
+VKLAD+LHN+R +E P +++ Q RD+ L R + EL+ L K
Sbjct: 153 VVKLADRLHNMRTLEYLKP-----QKQGQIAQETRDIFAPLANRLGIGCFKWELEDLAFK 207
Query: 254 Y 254
Y
Sbjct: 208 Y 208
>gi|329961919|ref|ZP_08299932.1| putative GTP diphosphokinase [Bacteroides fluxus YIT 12057]
gi|328531142|gb|EGF57992.1| putative GTP diphosphokinase [Bacteroides fluxus YIT 12057]
Length = 752
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 93/190 (48%), Gaps = 24/190 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVED 145
I KA +FA+ H +R+ G PYI HP+AVA I+ T +G S I SALLHD VED
Sbjct: 41 ITKAFNFANQAHKGIKRR--SGEPYILHPIAVARIVCTEIGLGSTS--ICSALLHDVVED 96
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKL 199
TD T E+IE FGP++ +V+ LT +R Q +L L+K+
Sbjct: 97 TDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILIKI 156
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQ-----GLRGTNAPIEAELDALFAKY 254
AD+LHN+R + LP + F A + + R I+ EL+ L KY
Sbjct: 157 ADRLHNMRTLGSMLP--------NKQFKIAGETLYIYAPLANRLGLYKIKTELENLSFKY 208
Query: 255 CTPREGRENE 264
P E RE E
Sbjct: 209 EHPEEYREIE 218
>gi|325679342|ref|ZP_08158927.1| GTP diphosphokinase [Ruminococcus albus 8]
gi|324108939|gb|EGC03170.1| GTP diphosphokinase [Ruminococcus albus 8]
Length = 763
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/127 (42%), Positives = 76/127 (59%), Gaps = 10/127 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
IV A + A HH Q+R+ G PYI HP+AVA+IL LG ++ V +ALLHD VEDT
Sbjct: 60 IVSAYELAESYHHDQKRE--SGEPYISHPIAVAYILLELGMDTDTVC--AALLHDVVEDT 115
Query: 147 DTTFEEIEREFGPRVRSVVEELTD---NKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
D T E++ ++FG V +V +T + T+DE+K +IL A ++KLA
Sbjct: 116 DCTLEQLHKKFGIDVTMLVNGVTKLGAVEIFTKDEQKAENIRKILLAMSEDIRVIIIKLA 175
Query: 201 DKLHNLR 207
D+LHN+R
Sbjct: 176 DRLHNMR 182
>gi|254414928|ref|ZP_05028692.1| RelA/SpoT family protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196178417|gb|EDX73417.1| RelA/SpoT family protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 751
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 100/213 (46%), Gaps = 31/213 (14%)
Query: 65 LGEAPDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH 124
L + T + S +PD +V+A +FA H Q R G PYI HPVAVA +L
Sbjct: 18 LQDCLSTASTTSDPSTPDDAALVVRAFEFAYQLHSEQYR--ASGEPYIAHPVAVAGLLRD 75
Query: 125 LGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR 181
LG N ++ + LLHD VEDTD T +EIE FG VR +VE +L+ ++ ER+
Sbjct: 76 LG--GNSTMMAAGLLHDVVEDTDVTPDEIESIFGAEVRHLVEGVTKLSKFNFSSKTERQA 133
Query: 182 ---CQILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRG 238
++ A +VKLAD+LHN+R +E P R + Q R
Sbjct: 134 ENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLKPQK------------QRAIAQETRE 181
Query: 239 TNAPI---------EAELDALFAKYCTPREGRE 262
AP+ + EL+ L KY P R+
Sbjct: 182 IFAPLANRLGIGRFKWELEDLSFKYLEPNAYRK 214
>gi|116072003|ref|ZP_01469271.1| metal dependent phosphohydrolase [Synechococcus sp. BL107]
gi|116065626|gb|EAU71384.1| metal dependent phosphohydrolase [Synechococcus sp. BL107]
Length = 776
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 77/144 (53%), Gaps = 12/144 (8%)
Query: 72 GDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNP 131
G S P+A++ V A DF+ H Q R G PYI HPVAVA +L +G S P
Sbjct: 56 GAGQSCPTDPEALL--VSAFDFSFQLHEGQFRA--SGDPYIVHPVAVADLLRDIG-ASAP 110
Query: 132 VVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------IL 185
V I + LHD VEDTD + EEI+ FG VR +VE +T + ++R Q +
Sbjct: 111 V-IAAGFLHDVVEDTDVSLEEIQAHFGSEVRELVEGVTKLGGIHFNDRTEAQAENLRRMF 169
Query: 186 HAPHSSHEAKLVKLADKLHNLRDI 209
A S LVKLAD++HN+R I
Sbjct: 170 MAMASDIRVVLVKLADRVHNMRTI 193
>gi|313205729|ref|YP_004044906.1| (p)ppGpp synthetase I SpoT/RelA [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|383485045|ref|YP_005393957.1| (p)ppGpp synthetase I SpoT/RelA [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|312445045|gb|ADQ81400.1| (p)ppGpp synthetase I, SpoT/RelA [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|380459730|gb|AFD55414.1| (p)ppgpp synthetase i, spot/rela [Riemerella anatipestifer ATCC
11845 = DSM 15868]
Length = 735
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 77/136 (56%), Gaps = 14/136 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H QRRK G PYI HP+AVA I+ LG S I ALLHD +
Sbjct: 35 IRKAFDIALDAHKDQRRK--TGEPYIYHPIAVAKIVAEEIGLGATS----IACALLHDVI 88
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSHEAKLVK 198
ED+D T+E+I++ FG ++ S+V LT +N++++ ++L LVK
Sbjct: 89 EDSDYTYEDIKKIFGEKIASIVNGLTKISVMNNQNISIQSENYRKLLLTLSEDFRVILVK 148
Query: 199 LADKLHNLRDIERSLP 214
+AD+LHN+R ++ + P
Sbjct: 149 IADRLHNMRTLDSTRP 164
>gi|372209276|ref|ZP_09497078.1| (p)ppGpp synthetase I SpoT/RelA [Flavobacteriaceae bacterium S85]
Length = 734
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 78/145 (53%), Gaps = 16/145 (11%)
Query: 75 DSGMH-SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSN 130
DS H S D I KA D A H QRRK G PYI HP+AVA I+ LG VS
Sbjct: 24 DSYQHLSDDDKKLIRKAFDIAVEAHSEQRRK--SGEPYIYHPIAVAKIVASEIGLGAVS- 80
Query: 131 PVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------I 184
I +ALLHD VEDTD T E++ER FG ++ +V LT M++D+ Q +
Sbjct: 81 ---IAAALLHDVVEDTDYTIEDMERLFGDKIAKIVNGLTKISRMSKDQMVSIQAENFRKM 137
Query: 185 LHAPHSSHEAKLVKLADKLHNLRDI 209
L + L+K+AD+ HN++ +
Sbjct: 138 LLTLNDDVRVILIKIADRFHNMQTL 162
>gi|162447686|ref|YP_001620818.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Acholeplasma laidlawii PG-8A]
gi|161985793|gb|ABX81442.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Acholeplasma laidlawii PG-8A]
Length = 724
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 78/144 (54%), Gaps = 14/144 (9%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ S I I KA A KH Q RK G PYI HP AVA IL L + P +++A
Sbjct: 18 IKSESNINLITKAYIVAKEKHLGQMRK--SGEPYITHPTAVARILAELE--AGPQTLVAA 73
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHS 190
LLHDTVEDTD T E IE++FG V S+V+ +T N T +++K +L A
Sbjct: 74 LLHDTVEDTDYTLEGIEKDFGKDVASLVDAVTKLSKLQFKNSLQTDNQQK---MLLAMAK 130
Query: 191 SHEAKLVKLADKLHNLRDIERSLP 214
L+K+AD+L N+R ++ P
Sbjct: 131 DIRVILIKIADRLQNMRTLDSMAP 154
>gi|15606196|ref|NP_213573.1| (p)ppGpp 3-pyrophosphohydrolase [Aquifex aeolicus VF5]
gi|6647846|sp|O67012.1|SPOT_AQUAE RecName: Full=Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|2983390|gb|AAC06975.1| (p)ppGpp 3-pyrophosphohydrolase [Aquifex aeolicus VF5]
Length = 696
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 103/205 (50%), Gaps = 19/205 (9%)
Query: 63 ARLGEAPDTGDSDSGM-HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHI 121
++LGE D + + H P I +A +FA KH Q+RK G PYI HP+ VA
Sbjct: 2 SKLGEVSLEEDLEKLLSHYPQHAEEIQRAYEFAKEKHGEQKRKT--GEPYIIHPLNVALK 59
Query: 122 LTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELT---DNKHMTRDE 178
L LG + II+ALLHDT+EDTDTT+EEI+ FG RV +VE +T K+ +
Sbjct: 60 LAELG--MDHETIIAALLHDTLEDTDTTYEEIKERFGERVAKLVEGVTKIGKIKYKSEQA 117
Query: 179 RKRCQILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWT--EERKTQYFNWARDVVQGL 236
+++ A L+KL+D+L N++ + W EE++ + ++ L
Sbjct: 118 ENYRKLILATAEDPRVILLKLSDRLDNVKTL-------WVFREEKRKKIAKETMEIYAPL 170
Query: 237 --RGTNAPIEAELDALFAKYCTPRE 259
R I+ EL+ KY P E
Sbjct: 171 AHRLGVWSIKNELEDWAFKYLYPEE 195
>gi|126728510|ref|ZP_01744326.1| guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative
[Sagittula stellata E-37]
gi|126711475|gb|EBA10525.1| guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative
[Sagittula stellata E-37]
Length = 712
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 94/185 (50%), Gaps = 18/185 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I A ++ H Q RK G PY HPVAVA ILT + + II+ALLHDT+EDT
Sbjct: 23 ITAAYEYGRQMHDGQFRKS--GEPYFTHPVAVAAILTE--QQLDDATIITALLHDTIEDT 78
Query: 147 DTTFEEIEREFGPRVRSVVEELTD--NKHMTRDERKRCQ----ILHAPHSSHEAKLVKLA 200
+T+ E+E+ FG V +V+ +T N ++ E K+ + + A LVKLA
Sbjct: 79 RSTYTEVEQNFGHEVAELVDGVTKLTNLQLSSSETKQAENFRKLFMAMSKDLRVILVKLA 138
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNA--PIEAELDALFAKYCTPR 258
D+LHN+R I+ P E++ Q D+ L G + EL+ L + P
Sbjct: 139 DRLHNMRTIKAMKP-----EKQQQKARETMDIFAPLAGRMGMQSMREELEDLAFRVLNP- 192
Query: 259 EGREN 263
+GRE+
Sbjct: 193 QGRES 197
>gi|109898336|ref|YP_661591.1| metal dependent phosphohydrolase [Pseudoalteromonas atlantica T6c]
gi|109700617|gb|ABG40537.1| metal dependent phosphohydrolase [Pseudoalteromonas atlantica T6c]
Length = 277
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 5/145 (3%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTT 149
A FAS H Q+RK G PY+ H + V ++ S+ +I+A LHD +EDT+ T
Sbjct: 111 AIKFASLHHANQKRKST-GEPYVNHLIEVVQLIQRYESSSDENTMIAAALHDILEDTEVT 169
Query: 150 FEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDI 209
++ FG V +V+ELT N D +K + S A+ +KLAD + N+
Sbjct: 170 SIGLKYLFGSEVSKIVQELTCNSANNSDNKKIALLNQIAIGSKAAQSIKLADVISNV--- 226
Query: 210 ERSLPVNWTEERKTQYFNWARDVVQ 234
S+P W+ ERK Y +W + V +
Sbjct: 227 -SSIPSQWSLERKLAYIDWCKKVAK 250
>gi|346309037|ref|ZP_08851140.1| hypothetical protein HMPREF9457_02849 [Dorea formicigenerans
4_6_53AFAA]
gi|345901281|gb|EGX71084.1| hypothetical protein HMPREF9457_02849 [Dorea formicigenerans
4_6_53AFAA]
Length = 194
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 78/130 (60%), Gaps = 4/130 (3%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A FA+ H Q RK + PYI HP+ V I+ L + +I +ALLHDT+ED
Sbjct: 11 VARAIAFATKAHEGQFRKGTK-RPYIVHPLEVGEIVATL--TFDEEIISAALLHDTIEDC 67
Query: 147 D-TTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
T E + +EF RV ++V++ +++K T ERK I H ++ +E +++ LADKL N
Sbjct: 68 QGITREVLAQEFSERVAALVDQESEDKSKTWFERKSHTIEHLKYAPYEVRMIGLADKLSN 127
Query: 206 LRDIERSLPV 215
+RDI+R PV
Sbjct: 128 IRDIDRDYPV 137
>gi|123967746|ref|YP_001008604.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus str. AS9601]
gi|123197856|gb|ABM69497.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. AS9601]
Length = 769
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 93/184 (50%), Gaps = 23/184 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
IVKA A H Q R G PYI HPVAVA++L +G S+ VI + LLHD VEDT
Sbjct: 63 IVKAFKLAYKAHDGQFR--ASGEPYIIHPVAVANLLKEIGASSS--VIAAGLLHDVVEDT 118
Query: 147 DTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
EIE FG V+ +VE +T +N+ + E R L A S LVKL
Sbjct: 119 GIDLSEIETNFGLEVKILVEGVTKLGGIHFNNRTEAQAENLRKMFL-AMASDFRVVLVKL 177
Query: 200 ADKLHNLRDIERSLPVNW-TEERKTQYFNWARDVVQGLR---GTNAPIEAELDALFAKYC 255
AD+LHN+R IE W +E+K + R++ L G N + EL+ L K+
Sbjct: 178 ADRLHNMRTIE------WLNDEKKLRIARETREIYAPLANRLGINR-FKWELEDLAFKFL 230
Query: 256 TPRE 259
P+E
Sbjct: 231 EPKE 234
>gi|373957366|ref|ZP_09617326.1| (p)ppGpp synthetase I, SpoT/RelA [Mucilaginibacter paludis DSM
18603]
gi|373893966|gb|EHQ29863.1| (p)ppGpp synthetase I, SpoT/RelA [Mucilaginibacter paludis DSM
18603]
Length = 740
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 71/133 (53%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H RRK G PYI HP+AVA I LG S I+ ALLHD V
Sbjct: 38 IRKAFDMALESHQDMRRK--SGEPYIYHPIAVAQIAAEEIGLGTTS----IVCALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT------DNKHMTRDERKRCQILHAPHSSHEAKLV 197
EDT+ T E+IEREFG +V +++ LT D + E R +L L+
Sbjct: 92 EDTNVTLEDIEREFGKKVAKIIDGLTKISGVFDTNSSLQAENFRKMLLTLADDVR-VILI 150
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R +E
Sbjct: 151 KLADRLHNMRTME 163
>gi|317475200|ref|ZP_07934467.1| RelA/SpoT family protein [Bacteroides eggerthii 1_2_48FAA]
gi|316908653|gb|EFV30340.1| RelA/SpoT family protein [Bacteroides eggerthii 1_2_48FAA]
Length = 752
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I SALLHD V
Sbjct: 41 ITKAFNFANQAHKGIKRR--SGEPYIMHPIAVAKIVCNEIGLGSTS----ICSALLHDVV 94
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L L+
Sbjct: 95 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 154
Query: 198 KLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQ-----GLRGTNAPIEAELDALFA 252
K+AD+LHN+R + LP + F A + + R I+ EL+ L
Sbjct: 155 KIADRLHNMRTLGSMLP--------NKQFKIAGETLYIYAPLANRLGLYKIKTELENLSF 206
Query: 253 KYCTPREGRENE 264
+Y P E RE E
Sbjct: 207 RYEHPEEYREIE 218
>gi|218129225|ref|ZP_03458029.1| hypothetical protein BACEGG_00801 [Bacteroides eggerthii DSM 20697]
gi|217988603|gb|EEC54923.1| RelA/SpoT family protein [Bacteroides eggerthii DSM 20697]
Length = 763
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I SALLHD V
Sbjct: 52 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVAKIVCNEIGLGSTS----ICSALLHDVV 105
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L L+
Sbjct: 106 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 165
Query: 198 KLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQ-----GLRGTNAPIEAELDALFA 252
K+AD+LHN+R + LP + F A + + R I+ EL+ L
Sbjct: 166 KIADRLHNMRTLGSMLP--------NKQFKIAGETLYIYAPLANRLGLYKIKTELENLSF 217
Query: 253 KYCTPREGRENE 264
+Y P E RE E
Sbjct: 218 RYEHPEEYREIE 229
>gi|425734810|ref|ZP_18853127.1| (p)ppGpp synthetase I, SpoT/RelA [Brevibacterium casei S18]
gi|425480746|gb|EKU47910.1| (p)ppGpp synthetase I, SpoT/RelA [Brevibacterium casei S18]
Length = 765
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 72/125 (57%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+V+A A H Q RK G PYI HPVAVA IL +G + PV + +ALLHDTVEDT
Sbjct: 52 VVRAYTVAEEAHRGQTRK--SGDPYITHPVAVATILAEIGML--PVTLAAALLHDTVEDT 107
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ----ILHAPHSSHEAKLVKLADK 202
D + E++ FGP V ++V+ +T +T + + + ++ A ++KLAD+
Sbjct: 108 DYSLEQLTESFGPEVAAMVDGVTKLDKLTYGQVAQSETVRKMIVAMAKDIRVLVIKLADR 167
Query: 203 LHNLR 207
LHN R
Sbjct: 168 LHNAR 172
>gi|119026020|ref|YP_909865.1| GTP pyrophosphokinase [Bifidobacterium adolescentis ATCC 15703]
gi|118765604|dbj|BAF39783.1| probable GTP pyrophosphokinase [Bifidobacterium adolescentis ATCC
15703]
Length = 770
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 95/191 (49%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M+I+ +A A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 33 HHPDEDMSILARAYRRAVTQHSSQRRK--SGEPYIIHPLAVAQILADLGM--GPLVVAAG 88
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T +E EFG V +V+ +T M + + + + A
Sbjct: 89 LLHDTVEDTDYTLDECRAEFGDTVTGLVDGVTKLSKMEYGDSAQAETIRKMVVAMSRDVR 148
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W +++ AR DV L G NA I+ EL
Sbjct: 149 VLVVKLADRVHNAR--------TWRYVKQSNAQKKARETLDVYAPLANRLGMNA-IKTEL 199
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 200 EELSFKVLYPK 210
>gi|262277157|ref|ZP_06054950.1| GTP pyrophosphokinase [alpha proteobacterium HIMB114]
gi|262224260|gb|EEY74719.1| GTP pyrophosphokinase [alpha proteobacterium HIMB114]
Length = 566
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 75/130 (57%), Gaps = 12/130 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I+ A +AS H Q+R G PYI HPVAVA+IL L K+ P I +ALLHDT+EDT
Sbjct: 23 IINAYKYASELHRTQKRHS--GDPYISHPVAVANILAEL-KLDGPT-ITTALLHDTIEDT 78
Query: 147 DTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T++E++ FG + +V+ +T + K +T E R IL A LVKL
Sbjct: 79 KATYDEVKNNFGEEIADLVDGVTKISKLEVEKKTLTAGENFRKLIL-ATSKDIRVLLVKL 137
Query: 200 ADKLHNLRDI 209
AD+LHN+R I
Sbjct: 138 ADRLHNIRTI 147
>gi|300856534|ref|YP_003781518.1| GTP pyrophosphokinase [Clostridium ljungdahlii DSM 13528]
gi|300436649|gb|ADK16416.1| GTP pyrophosphokinase [Clostridium ljungdahlii DSM 13528]
Length = 725
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 97/179 (54%), Gaps = 17/179 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA FA H Q+R+ G PYI HPV VA+IL +G + I++ LLHD +EDT
Sbjct: 23 KAYYFADEAHKKQKRE--SGEPYISHPVEVAYILVEMG--LDTSTIVAGLLHDVIEDTQF 78
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHM---TRDERKRCQI---LHAPHSSHEAKLVKLADK 202
++E+I+REF V ++VE +T + T++E++ + L A L+KLAD+
Sbjct: 79 SYEDIKREFSVEVANLVEGVTKLGKIECKTKEEQQADNVRKMLLAMADDIRVILIKLADR 138
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
LHN+R + + +PV +E+ + F D+ L R + I+ EL+ L +Y E
Sbjct: 139 LHNMRTL-KYMPVKKQKEKAKETF----DIYAPLAHRLGMSKIKWELEDLAFRYINQNE 192
>gi|319644301|ref|ZP_07998795.1| GTP pyrophosphokinase [Bacteroides sp. 3_1_40A]
gi|317384196|gb|EFV65169.1| GTP pyrophosphokinase [Bacteroides sp. 3_1_40A]
Length = 756
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 11/135 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVED 145
I KA +FA H +R+ G PYI HP+AVA I+ T +G S I SALLHD VED
Sbjct: 39 ITKAFNFAKQAHKGVKRRS--GEPYIMHPIAVAKIVCTEIGLGSTS--ICSALLHDVVED 94
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKL 199
TD T E+IE FGP++ +V+ LT +R Q +L L+K+
Sbjct: 95 TDYTVEDIENLFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILIKI 154
Query: 200 ADKLHNLRDIERSLP 214
AD+LHN+R + LP
Sbjct: 155 ADRLHNMRTLGSMLP 169
>gi|212693635|ref|ZP_03301763.1| hypothetical protein BACDOR_03154 [Bacteroides dorei DSM 17855]
gi|237708795|ref|ZP_04539276.1| GTP pyrophosphokinase [Bacteroides sp. 9_1_42FAA]
gi|265755939|ref|ZP_06090406.1| GTP pyrophosphokinase [Bacteroides sp. 3_1_33FAA]
gi|345513428|ref|ZP_08792949.1| GTP pyrophosphokinase [Bacteroides dorei 5_1_36/D4]
gi|423228882|ref|ZP_17215288.1| RelA/SpoT family protein [Bacteroides dorei CL02T00C15]
gi|423242284|ref|ZP_17223393.1| RelA/SpoT family protein [Bacteroides dorei CL03T12C01]
gi|423247694|ref|ZP_17228742.1| RelA/SpoT family protein [Bacteroides dorei CL02T12C06]
gi|212663888|gb|EEB24462.1| RelA/SpoT family protein [Bacteroides dorei DSM 17855]
gi|229437421|gb|EEO47498.1| GTP pyrophosphokinase [Bacteroides dorei 5_1_36/D4]
gi|229457221|gb|EEO62942.1| GTP pyrophosphokinase [Bacteroides sp. 9_1_42FAA]
gi|263234017|gb|EEZ19618.1| GTP pyrophosphokinase [Bacteroides sp. 3_1_33FAA]
gi|392631587|gb|EIY25558.1| RelA/SpoT family protein [Bacteroides dorei CL02T12C06]
gi|392635621|gb|EIY29520.1| RelA/SpoT family protein [Bacteroides dorei CL02T00C15]
gi|392639570|gb|EIY33386.1| RelA/SpoT family protein [Bacteroides dorei CL03T12C01]
Length = 756
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 11/135 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVED 145
I KA +FA H +R+ G PYI HP+AVA I+ T +G S I SALLHD VED
Sbjct: 39 ITKAFNFAKQAHKGVKRRS--GEPYIMHPIAVAKIVCTEIGLGSTS--ICSALLHDVVED 94
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKL 199
TD T E+IE FGP++ +V+ LT +R Q +L L+K+
Sbjct: 95 TDYTVEDIENLFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILIKI 154
Query: 200 ADKLHNLRDIERSLP 214
AD+LHN+R + LP
Sbjct: 155 ADRLHNMRTLGSMLP 169
>gi|329957548|ref|ZP_08298023.1| RelA/SpoT family protein [Bacteroides clarus YIT 12056]
gi|328522425|gb|EGF49534.1| RelA/SpoT family protein [Bacteroides clarus YIT 12056]
Length = 753
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I SALLHD V
Sbjct: 41 ITKAFNFANQAHKGIKRR--SGEPYIMHPIAVAKIVCNEIGLGSTS----ICSALLHDVV 94
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L L+
Sbjct: 95 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 154
Query: 198 KLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQ-----GLRGTNAPIEAELDALFA 252
K+AD+LHN+R + LP + F A + + R I+ EL+ L
Sbjct: 155 KIADRLHNMRTLGSMLP--------NKQFKIAGETLYIYAPLANRLGLYKIKTELENLSF 206
Query: 253 KYCTPREGRENE 264
+Y P E RE E
Sbjct: 207 RYEHPEEYREIE 218
>gi|357236902|ref|ZP_09124245.1| putative bifunctional (P)ppGpp synthase/hydrolase RelA
[Streptococcus criceti HS-6]
gi|356884884|gb|EHI75084.1| putative bifunctional (P)ppGpp synthase/hydrolase RelA
[Streptococcus criceti HS-6]
Length = 740
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 10/154 (6%)
Query: 67 EAPDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLG 126
+ P+ D+ +P + + KA D+A+ H QRR+ G PYI HP+ VA IL L
Sbjct: 8 KGPEVVDAVKTYMAPADVALVQKALDYATEAHKTQRRQ--SGEPYIIHPIQVAGILADLQ 65
Query: 127 KVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELT---DNKHMTRDER---K 180
+ V + LHD VEDT+ T E++ER+FG +V +V+ +T K+ + +E+
Sbjct: 66 --LDAVTVACGFLHDVVEDTEVTLEDLERDFGLKVSQIVDGVTKLGKVKYKSHEEQLAEN 123
Query: 181 RCQILHAPHSSHEAKLVKLADKLHNLRDIERSLP 214
++L A LVKLAD+LHN+R ++ P
Sbjct: 124 HRKMLMAMSKDIRVILVKLADRLHNMRTLKHLRP 157
>gi|332637871|ref|ZP_08416734.1| GTP pyrophosphokinase [Weissella cibaria KACC 11862]
Length = 744
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 86/152 (56%), Gaps = 10/152 (6%)
Query: 62 EARLGEAPDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHI 121
EA++ A + D +G + + + + KA DFA + H Q+RK G PYI HP+ VA I
Sbjct: 3 EAKVLTAQEVHDLVAGYMNEEHVKKVDKAYDFACNLHQEQKRK--SGEPYIIHPIQVAGI 60
Query: 122 LTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD-NKHMTRDERK 180
L L +P +++ LHD VEDTD T E++EREFG V +V+ ++ +K + R+
Sbjct: 61 LADLH--MDPDTVVAGYLHDVVEDTDATLEDVEREFGHDVAVIVDGVSKLSKIEYKSSRE 118
Query: 181 RC-----QILHAPHSSHEAKLVKLADKLHNLR 207
+ ++L A +VKLAD+LHN+R
Sbjct: 119 QLAENHRKLLLAMSHDIRVIIVKLADRLHNMR 150
>gi|294778222|ref|ZP_06743648.1| putative GTP diphosphokinase [Bacteroides vulgatus PC510]
gi|345519669|ref|ZP_08799084.1| GTP pyrophosphokinase [Bacteroides sp. 4_3_47FAA]
gi|423312538|ref|ZP_17290475.1| RelA/SpoT family protein [Bacteroides vulgatus CL09T03C04]
gi|254835598|gb|EET15907.1| GTP pyrophosphokinase [Bacteroides sp. 4_3_47FAA]
gi|294447850|gb|EFG16424.1| putative GTP diphosphokinase [Bacteroides vulgatus PC510]
gi|392688226|gb|EIY81515.1| RelA/SpoT family protein [Bacteroides vulgatus CL09T03C04]
Length = 756
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 11/135 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVED 145
I KA +FA H +R+ G PYI HP+AVA I+ T +G S I SALLHD VED
Sbjct: 39 ITKAFNFAKQAHKGVKRRS--GEPYIMHPIAVAKIVCTEIGLGSTS--ICSALLHDVVED 94
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKL 199
TD T E+IE FGP++ +V+ LT +R Q +L L+K+
Sbjct: 95 TDYTVEDIENLFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILIKI 154
Query: 200 ADKLHNLRDIERSLP 214
AD+LHN+R + LP
Sbjct: 155 ADRLHNMRTLGSMLP 169
>gi|260892286|ref|YP_003238383.1| (p)ppGpp synthetase I SpoT/RelA [Ammonifex degensii KC4]
gi|260864427|gb|ACX51533.1| (p)ppGpp synthetase I, SpoT/RelA [Ammonifex degensii KC4]
Length = 710
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 71/128 (55%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA DFA KH QRR G P++ HPVAVA IL L + I++ LLHD VEDT T
Sbjct: 25 KAFDFAQAKHAGQRRFS--GEPFLSHPVAVARILAELE--LDTETIVAGLLHDVVEDTGT 80
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EEIE EFG + ++V+ +T + ++ Q + A L+KLAD+
Sbjct: 81 TLEEIEHEFGAEIAALVDGVTKLSRLQFRSQEEQQAENLRKMFVAMAKDVRVVLIKLADR 140
Query: 203 LHNLRDIE 210
LHNLR ++
Sbjct: 141 LHNLRTLQ 148
>gi|218246275|ref|YP_002371646.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 8801]
gi|257059322|ref|YP_003137210.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 8802]
gi|218166753|gb|ACK65490.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 8801]
gi|256589488|gb|ACV00375.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 8802]
Length = 743
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 97/200 (48%), Gaps = 26/200 (13%)
Query: 74 SDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVV 133
SDS + + I I +A +FA H Q RK G PYI HP+AVA +L LG + +
Sbjct: 29 SDS---NSEEISLICRAFNFAYQLHEGQYRKS--GEPYIAHPIAVAGLLRDLG--GDKAM 81
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELT---------DNKHMTRDERKRCQI 184
I + LHD VEDTD T E+IE FG VR +VE +T +H + R+ +
Sbjct: 82 IAAGFLHDVVEDTDVTVEQIEENFGSEVRQLVEGVTKLSKFNFSSKTEHQAENFRR---M 138
Query: 185 LHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAP 242
A +VKLAD+LHN+R +E P E++ + +++ L R
Sbjct: 139 FLAMAKDIRVIVVKLADRLHNMRTLEHLKP-----EKQERIARETKEIFAPLANRLGIWR 193
Query: 243 IEAELDALFAKYCTPREGRE 262
+ EL+ L KY P RE
Sbjct: 194 FKWELEDLSFKYLEPEAYRE 213
>gi|150004463|ref|YP_001299207.1| GTP pyrophosphokinase [Bacteroides vulgatus ATCC 8482]
gi|149932887|gb|ABR39585.1| GTP pyrophosphokinase [Bacteroides vulgatus ATCC 8482]
Length = 756
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 11/135 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVED 145
I KA +FA H +R+ G PYI HP+AVA I+ T +G S I SALLHD VED
Sbjct: 39 ITKAFNFAKQAHKGVKRRS--GEPYIMHPIAVAKIVCTEIGLGSTS--ICSALLHDVVED 94
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKL 199
TD T E+IE FGP++ +V+ LT +R Q +L L+K+
Sbjct: 95 TDYTVEDIENLFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILIKI 154
Query: 200 ADKLHNLRDIERSLP 214
AD+LHN+R + LP
Sbjct: 155 ADRLHNMRTLGSMLP 169
>gi|282897317|ref|ZP_06305319.1| GTP pyrophosphokinase [Raphidiopsis brookii D9]
gi|281197969|gb|EFA72863.1| GTP pyrophosphokinase [Raphidiopsis brookii D9]
Length = 756
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 97/202 (48%), Gaps = 23/202 (11%)
Query: 74 SDSGMHSPDAIMN----IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVS 129
S+SG D N + A FA H Q RK G PYI HPVAVA +L LG
Sbjct: 26 SNSGSGEDDRRCNDNSLVCNALKFAYELHEGQHRKS--GEPYIAHPVAVADLLKDLG--G 81
Query: 130 NPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD-------NKHMTRDERKRC 182
N +I + LHD VEDT+ T EEIE++FG VR +VE +T +K ++ E R
Sbjct: 82 NAPMIAAGFLHDVVEDTEVTIEEIEQKFGHEVRQLVEGVTKLSKINFTSKTESQAENFRR 141
Query: 183 QILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTN 240
L +VKLAD+LHN+R ++ +E + + RD+ L R
Sbjct: 142 MFLSMAQDIR-VIVVKLADRLHNMRTLQYM-----SETSRRRSAQETRDIFAPLANRLGI 195
Query: 241 APIEAELDALFAKYCTPREGRE 262
I+ EL+ L KY P RE
Sbjct: 196 WHIKWELEDLAFKYLEPDAYRE 217
>gi|428223952|ref|YP_007108049.1| (p)ppGpp synthetase I SpoT/RelA [Geitlerinema sp. PCC 7407]
gi|427983853|gb|AFY64997.1| (p)ppGpp synthetase I, SpoT/RelA [Geitlerinema sp. PCC 7407]
Length = 763
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 73/130 (56%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A FA H Q R G PYI HPVAVA +L LG +P +I + LHD VEDT
Sbjct: 50 ICRAFCFAYELHEGQFR--ASGEPYIAHPVAVAGLLRDLG--GSPAMIAAGFLHDVVEDT 105
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
D T +EIE FGP VR +VE +L+ ++ ER+ ++ A +VKLA
Sbjct: 106 DVTADEIEERFGPEVRQMVEGVTKLSKFNFSSKTERQAENFRRMFLAMAKDIRVIVVKLA 165
Query: 201 DKLHNLRDIE 210
D+LHN+R +E
Sbjct: 166 DRLHNMRTLE 175
>gi|29349406|ref|NP_812909.1| GTP pyrophosphokinase [Bacteroides thetaiotaomicron VPI-5482]
gi|298384934|ref|ZP_06994493.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Bacteroides sp. 1_1_14]
gi|383120334|ref|ZP_09941063.1| RelA/SpoT family protein [Bacteroides sp. 1_1_6]
gi|29341315|gb|AAO79103.1| GTP pyrophosphokinase [Bacteroides thetaiotaomicron VPI-5482]
gi|251840624|gb|EES68706.1| RelA/SpoT family protein [Bacteroides sp. 1_1_6]
gi|298262078|gb|EFI04943.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Bacteroides sp. 1_1_14]
Length = 747
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVAQIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 92 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|380693758|ref|ZP_09858617.1| GTP pyrophosphokinase [Bacteroides faecis MAJ27]
Length = 747
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVAQIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 92 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|118444430|ref|YP_877917.1| GTP pyrophosphokinase [Clostridium novyi NT]
gi|118134886|gb|ABK61930.1| GTP pyrophosphokinase [Clostridium novyi NT]
Length = 729
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I+KA ++A H Q+R G PYI HPV VA IL +G N I ++LLHD +EDT
Sbjct: 21 IIKAYNYAKDAHKAQKR--ISGEPYIIHPVEVACILAEMGLDEN--TIAASLLHDVIEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
D T+E++E+EF V ++VE +L K T++E++ ++L A L+KLA
Sbjct: 77 DYTYEDVEKEFNREVANLVEGVTKLGKIKFKTKEEQQSENVRKMLLAMTKDIRVILIKLA 136
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R ++ T E++ + D+ L R + ++ EL+ L +Y P
Sbjct: 137 DRLHNMRTLKYM-----TVEKQKEKAKETLDIYAPLAHRLGISKVKWELEDLALRYLNPN 191
Query: 259 E 259
E
Sbjct: 192 E 192
>gi|443322004|ref|ZP_21051040.1| (p)ppGpp synthetase, RelA/SpoT family [Gloeocapsa sp. PCC 73106]
gi|442788304|gb|ELR98001.1| (p)ppGpp synthetase, RelA/SpoT family [Gloeocapsa sp. PCC 73106]
Length = 754
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 71 TGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSN 130
GD + H+ D + I +A +FA H Q RK G PYI HPVAVA +L LG +
Sbjct: 27 NGDPNHQYHTEDNRL-ICQAYEFAYELHKQQTRKS--GEPYIVHPVAVAGLLRDLG--GD 81
Query: 131 PVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQI 184
+I + LHD VEDT+ + EEIE FG +VR +VE +L+ + ++ ER+ ++
Sbjct: 82 SAMIAAGFLHDVVEDTEVSLEEIESRFGEQVRQLVEGVTKLSKFEFSSKTERQAENFRRM 141
Query: 185 LHAPHSSHEAKLVKLADKLHNLRDIE 210
A +VKLAD+LHN+R ++
Sbjct: 142 FLAMAKDIRVIVVKLADRLHNMRTLQ 167
>gi|312114996|ref|YP_004012592.1| (p)ppGpp synthetase I SpoT/RelA [Rhodomicrobium vannielii ATCC
17100]
gi|311220125|gb|ADP71493.1| (p)ppGpp synthetase I, SpoT/RelA [Rhodomicrobium vannielii ATCC
17100]
Length = 745
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 80/135 (59%), Gaps = 12/135 (8%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
+A++N +A +A H Q+R G PY HP+AVA ILT L K+ + I +ALLHD
Sbjct: 19 EALLN--RAYVYAMQAHGQQKR--ASGDPYFSHPLAVAAILTGL-KLDDET-IATALLHD 72
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAK 195
T+EDT T +EIE+ FGP + ++V+ LT + + +K Q +L A S
Sbjct: 73 TIEDTQATKDEIEKLFGPNIAALVDGLTKIEKLNLVSKKTQQAENFRKLLIAISSDVRVL 132
Query: 196 LVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 133 LVKLADRLHNMRTLE 147
>gi|189463195|ref|ZP_03011980.1| hypothetical protein BACCOP_03908 [Bacteroides coprocola DSM 17136]
gi|189430174|gb|EDU99158.1| RelA/SpoT family protein [Bacteroides coprocola DSM 17136]
Length = 757
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 72/137 (52%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT---HLGKVSNPVVIISALLHDTV 143
I KA +FA H RR+ G PYI HP+AVA I LG S I SALLHD V
Sbjct: 39 ITKAFNFAKQAHKGVRRR--SGEPYILHPIAVARIACVEIGLGSTS----ICSALLHDVV 92
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 93 EDTDYTVEDIENLFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMNDDIRVILI 152
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 153 KIADRLHNMRTLGSMLP 169
>gi|94985409|ref|YP_604773.1| (p)ppGpp synthetase I SpoT/RelA [Deinococcus geothermalis DSM
11300]
gi|94555690|gb|ABF45604.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus geothermalis DSM
11300]
Length = 766
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 92/189 (48%), Gaps = 27/189 (14%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A FA H RK G PYI HPVAVA IL LG ++ I++ LLHDTVED
Sbjct: 31 IERAYVFARDAHAGVNRKS--GEPYITHPVAVATILARLGMDTDS--IMAGLLHDTVEDV 86
Query: 147 D-TTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRC---------------QILHAPHS 190
D TFE IEREFGP VR +VE T +++ ++ Q+L A
Sbjct: 87 DGVTFEVIEREFGPDVRRIVEGETKVSKLSKQGSQQAEVRDTGRDLQAENLRQMLIAMTD 146
Query: 191 SHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELD 248
+VKLAD+LHN+R + P E++ + D+ L R I+ EL+
Sbjct: 147 DLRIIVVKLADRLHNMRTLGAMKP-----EKQQRIARETMDIFAPLAHRLGIGQIKWELE 201
Query: 249 ALFAKYCTP 257
L +Y P
Sbjct: 202 DLAFQYLQP 210
>gi|172039304|ref|YP_001805805.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Cyanothece sp.
ATCC 51142]
gi|354552428|ref|ZP_08971736.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. ATCC 51472]
gi|171700758|gb|ACB53739.1| probable guanosine-3',5'-bis(diphosphate) 3'-diphosphatase,
(ppGpp)ase [Cyanothece sp. ATCC 51142]
gi|353555750|gb|EHC25138.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. ATCC 51472]
Length = 744
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 92/185 (49%), Gaps = 19/185 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +FA H Q RK G PYI HPVAVA IL LG + +I + LHD VEDT
Sbjct: 39 ICRAFNFAYKLHEGQTRK--SGEPYIAHPVAVAGILRDLG--GDKAMIAAGFLHDVVEDT 94
Query: 147 DTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
D T EEIE FG V +VE +T NK + E R L A +VKL
Sbjct: 95 DVTVEEIEEMFGQEVALLVEGVTKLSKFNFSNKTEQQAENFRRMFL-AMARDIRVIVVKL 153
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTP 257
AD+LHN+R +E P E++ + +++ L R ++ EL+ L KY P
Sbjct: 154 ADRLHNMRTLEPLRP-----EKQKRIARETKEIFAPLANRLGIWRVKWELEDLSFKYLEP 208
Query: 258 REGRE 262
+ RE
Sbjct: 209 EDYRE 213
>gi|158335664|ref|YP_001516836.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris marina MBIC11017]
gi|158305905|gb|ABW27522.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris marina MBIC11017]
Length = 753
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 89/186 (47%), Gaps = 31/186 (16%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +F H QRR G PYI HPV+VA +L LG + +I + LHD VEDT
Sbjct: 40 ICRAFNFGYQLHEGQRRA--SGEPYIAHPVSVAELLRDLG--GSAAMIAAGFLHDVVEDT 95
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
D T E IE EFG VR +VE +L+ T+ ER+ ++ A +VKLA
Sbjct: 96 DVTPETIEAEFGLEVRQLVEGVTKLSKFNFSTKTEREAENFRRMFLAMAQDIRVIVVKLA 155
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPI---------EAELDALF 251
D+LHN+R +E PV R + Q R AP+ + EL+ L
Sbjct: 156 DRLHNMRTLEHLPPVK------------QRRIAQETRDVFAPLANRLGIWRFKWELEDLA 203
Query: 252 AKYCTP 257
KY P
Sbjct: 204 FKYLEP 209
>gi|333029833|ref|ZP_08457894.1| (p)ppGpp synthetase I, SpoT/RelA [Bacteroides coprosuis DSM 18011]
gi|332740430|gb|EGJ70912.1| (p)ppGpp synthetase I, SpoT/RelA [Bacteroides coprosuis DSM 18011]
Length = 747
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H RR+ G PYI HP+AVA I+ + LG S I SALLHD V
Sbjct: 38 ITKAFNFANEAHKGIRRR--SGEPYIMHPIAVAKIVCNEIGLGSTS----ICSALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T ++IE FGP++ +V+ LT +R Q +L L+
Sbjct: 92 EDTDYTVDDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|225351323|ref|ZP_03742346.1| hypothetical protein BIFPSEUDO_02916 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225157667|gb|EEG70950.1| hypothetical protein BIFPSEUDO_02916 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 773
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 75/134 (55%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A + A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDEDISILERAYERAVKQHSSQRRK--SGEPYIIHPLAVAQILADLGM--GPLVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T +E EFG V +V+ +T M + + + + A
Sbjct: 92 LLHDTVEDTDYTLDECRAEFGDTVTGLVDGVTKLSKMEYGDSAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD++HN R
Sbjct: 152 VLVVKLADRVHNAR 165
>gi|123965455|ref|YP_001010536.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9515]
gi|123199821|gb|ABM71429.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9515]
Length = 769
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
IVKA A H+ Q R G PYI HP+AVA +L +G S+ VI + LLHD VEDT
Sbjct: 63 IVKAFKLAYQAHNGQLR--ASGEPYIIHPIAVADLLKEIGASSS--VIAAGLLHDVVEDT 118
Query: 147 DTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
EIE FG V+ +VE +T +N+ + E R L A S LVKL
Sbjct: 119 GIALSEIEINFGLEVKVLVEGVTKLGGIHFNNRTEAQAENLRKMFL-AMASDIRVVLVKL 177
Query: 200 ADKLHNLRDIERSLPVNW-TEERKTQYFNWARDVVQGLR---GTNAPIEAELDALFAKYC 255
AD+LHN+R I+ W EERK + R++ L G N + EL+ L K+
Sbjct: 178 ADRLHNMRTIQ------WLNEERKERIARETREIYAPLANRLGINR-FKWELEDLAFKFL 230
Query: 256 TPRE 259
P E
Sbjct: 231 EPDE 234
>gi|325298624|ref|YP_004258541.1| (p)ppGpp synthetase I SpoT/RelA [Bacteroides salanitronis DSM
18170]
gi|324318177|gb|ADY36068.1| (p)ppGpp synthetase I, SpoT/RelA [Bacteroides salanitronis DSM
18170]
Length = 758
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 72/137 (52%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT---HLGKVSNPVVIISALLHDTV 143
I KA +FA H RR+ G PYI HP+AVA I LG S I SALLHD V
Sbjct: 39 ITKAFNFARQAHKGVRRRS--GEPYILHPIAVARIACVEIGLGSTS----ICSALLHDVV 92
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 93 EDTDYTVEDIENLFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMNDDIRVILI 152
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 153 KIADRLHNMRTLGSMLP 169
>gi|217967359|ref|YP_002352865.1| (p)ppGpp synthetase I SpoT/RelA [Dictyoglomus turgidum DSM 6724]
gi|217336458|gb|ACK42251.1| (p)ppGpp synthetase I, SpoT/RelA [Dictyoglomus turgidum DSM 6724]
Length = 727
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 76/131 (58%), Gaps = 10/131 (7%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
N+ +A FA + H Q RK G PYI HPV VA IL +LG V+I+ LLHD +ED
Sbjct: 23 NLKRAFIFAENAHKGQVRKS--GEPYITHPVEVAKILMNLG--MEETVVIAGLLHDVLED 78
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTR--DERKRCQILH----APHSSHEAKLVKL 199
T+ T EEIE+EFG V S+VE +T + ++ E R Q L A ++KL
Sbjct: 79 TNVTKEEIEKEFGKDVLSLVEAITKLEKLSFYPTEAYRAQNLRKMFIAMAKDIRVIIIKL 138
Query: 200 ADKLHNLRDIE 210
AD+LHN++ ++
Sbjct: 139 ADRLHNMQTLQ 149
>gi|218296101|ref|ZP_03496870.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus aquaticus Y51MC23]
gi|218243478|gb|EED10007.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus aquaticus Y51MC23]
Length = 726
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP+ + KA FA H Q RK G PYI HPVAVA IL L ++ V + LL
Sbjct: 19 SPEDREKVHKAYLFAEEAHRGQLRKS--GEPYITHPVAVAEILASLRMDADTVA--AGLL 74
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTR-----DERKRC----QILHAPHS 190
HDT+ED EE+ER FGP VR +VE T + + E KR Q+ A
Sbjct: 75 HDTMEDCGVAGEELERRFGPAVRRIVEGETKVSKLYKFANLEGEEKRAEDLRQMFIAMAE 134
Query: 191 SHEAKLVKLADKLHNLRDIE 210
+VKLAD+LHNLR +E
Sbjct: 135 DVRIIIVKLADRLHNLRTLE 154
>gi|423301763|ref|ZP_17279786.1| RelA/SpoT family protein [Bacteroides finegoldii CL09T03C10]
gi|408470854|gb|EKJ89386.1| RelA/SpoT family protein [Bacteroides finegoldii CL09T03C10]
Length = 748
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVASIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 92 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|160891222|ref|ZP_02072225.1| hypothetical protein BACUNI_03670 [Bacteroides uniformis ATCC 8492]
gi|270294503|ref|ZP_06200705.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|156859443|gb|EDO52874.1| RelA/SpoT family protein [Bacteroides uniformis ATCC 8492]
gi|270275970|gb|EFA21830.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 752
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I SALLHD V
Sbjct: 41 ITKAFNFANQAHKGIKRR--SGEPYIMHPIAVAKIVCNEIGLGSTS----ICSALLHDVV 94
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L L+
Sbjct: 95 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 154
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 155 KIADRLHNMRTLGSMLP 171
>gi|126695549|ref|YP_001090435.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9301]
gi|126542592|gb|ABO16834.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9301]
Length = 769
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 93/184 (50%), Gaps = 23/184 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
IVKA A H Q R G PYI HPVAVA++L +G S+ VI + LLHD VEDT
Sbjct: 63 IVKAFKLAYKAHDGQFR--ASGEPYIIHPVAVANLLKEIGASSS--VIAAGLLHDVVEDT 118
Query: 147 DTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
EIE FG V+ +VE +T +N+ + E R L A S LVKL
Sbjct: 119 GIDLSEIETNFGLEVKILVEGVTKLGGIHFNNRTEAQAENLRKMFL-AMASDIRVVLVKL 177
Query: 200 ADKLHNLRDIERSLPVNW-TEERKTQYFNWARDVVQGLR---GTNAPIEAELDALFAKYC 255
AD+LHN+R IE W +E+K + R++ L G N + EL+ L K+
Sbjct: 178 ADRLHNMRTIE------WLNDEKKLRIARETREIYAPLANRLGINR-FKWELEDLAFKFL 230
Query: 256 TPRE 259
P+E
Sbjct: 231 EPKE 234
>gi|296393867|ref|YP_003658751.1| (p)ppGpp synthetase I [Segniliparus rotundus DSM 44985]
gi|296181014|gb|ADG97920.1| (p)ppGpp synthetase I, SpoT/RelA [Segniliparus rotundus DSM 44985]
Length = 797
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 76/132 (57%), Gaps = 9/132 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA D A +H Q R+ G PYI HP+AVAHIL LG + + +++ALLHDTVEDT
Sbjct: 93 LAKAYDIAQARHEGQFRR--SGDPYITHPLAVAHILAELGM--DTLSLVAALLHDTVEDT 148
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADK 202
+ EE+ER+FG V +V+ +T +T + + A ++K+AD+
Sbjct: 149 GYSLEELERDFGSDVAHIVDGVTKLDKVTWGAGAEAETIRKMVIAMARDPRVLVIKVADR 208
Query: 203 LHNLRDIERSLP 214
LHN+R + R +P
Sbjct: 209 LHNMRTM-RFMP 219
>gi|443310002|ref|ZP_21039673.1| (p)ppGpp synthetase, RelA/SpoT family [Synechocystis sp. PCC 7509]
gi|442779938|gb|ELR90160.1| (p)ppGpp synthetase, RelA/SpoT family [Synechocystis sp. PCC 7509]
Length = 744
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 93/195 (47%), Gaps = 25/195 (12%)
Query: 68 APDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGK 127
+ D SD+G+ I +A +FA H Q RK G YI HPVAVA +L LG
Sbjct: 26 SSDNDSSDAGI--------ICRAFEFAYKLHAGQYRK--SGESYICHPVAVAGLLRDLG- 74
Query: 128 VSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ---- 183
N +I + LHD VEDTD T E+IE+ F P VR +VE +T + Q
Sbjct: 75 -GNGAMIAAGFLHDVVEDTDITIEQIEQIFNPEVRQLVEGVTKLSKFNFSSKTESQAENI 133
Query: 184 --ILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGT 239
+ A +VKLAD+LHN+R +E + +E++ + RD+ L R
Sbjct: 134 RRMFLAMVQDIRVIVVKLADRLHNMRTLE-----HLADEKRRRIATETRDIFAPLAHRLG 188
Query: 240 NAPIEAELDALFAKY 254
+ EL+ L KY
Sbjct: 189 IGRFKWELEDLAFKY 203
>gi|423305266|ref|ZP_17283265.1| RelA/SpoT family protein [Bacteroides uniformis CL03T00C23]
gi|423311084|ref|ZP_17289053.1| RelA/SpoT family protein [Bacteroides uniformis CL03T12C37]
gi|392680116|gb|EIY73490.1| RelA/SpoT family protein [Bacteroides uniformis CL03T12C37]
gi|392681888|gb|EIY75244.1| RelA/SpoT family protein [Bacteroides uniformis CL03T00C23]
Length = 752
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I SALLHD V
Sbjct: 41 ITKAFNFANQAHKGIKRR--SGEPYIMHPIAVAKIVCNEIGLGSTS----ICSALLHDVV 94
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L L+
Sbjct: 95 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 154
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 155 KIADRLHNMRTLGSMLP 171
>gi|224025889|ref|ZP_03644255.1| hypothetical protein BACCOPRO_02635 [Bacteroides coprophilus DSM
18228]
gi|224019125|gb|EEF77123.1| hypothetical protein BACCOPRO_02635 [Bacteroides coprophilus DSM
18228]
Length = 755
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 72/137 (52%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT---HLGKVSNPVVIISALLHDTV 143
I KA +FA H RR+ G PYI HP+AVA I LG S I SALLHD V
Sbjct: 39 ITKAFNFARQAHKGVRRR--SGEPYILHPIAVARIACVEIGLGSTS----ICSALLHDVV 92
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 93 EDTDYTVEDIENLFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMNDDIRVILI 152
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 153 KIADRLHNMRTLGSMLP 169
>gi|406574780|ref|ZP_11050499.1| (p)ppGpp synthetase I SpoT/RelA [Janibacter hoylei PVAS-1]
gi|404555791|gb|EKA61274.1| (p)ppGpp synthetase I SpoT/RelA [Janibacter hoylei PVAS-1]
Length = 760
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 76/132 (57%), Gaps = 9/132 (6%)
Query: 81 PDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
P A ++++ +A D A H Q RK G PYI HP+AVA IL LG PV + +ALL
Sbjct: 46 PKADLSVIERAYDVAERAHRDQVRK--SGDPYITHPLAVATILAELGM--TPVTLAAALL 101
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ----ILHAPHSSHEAK 195
HDTVEDTD + +++E EFG V +V+ +T +T + + + ++ A
Sbjct: 102 HDTVEDTDYSLDDLEEEFGSEVAKLVDGVTKLDKVTYGDNAQAETVRKMIVAMARDIRVL 161
Query: 196 LVKLADKLHNLR 207
++KLAD+LHN R
Sbjct: 162 VIKLADRLHNAR 173
>gi|198276303|ref|ZP_03208834.1| hypothetical protein BACPLE_02497 [Bacteroides plebeius DSM 17135]
gi|198270745|gb|EDY95015.1| RelA/SpoT family protein [Bacteroides plebeius DSM 17135]
Length = 759
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 72/137 (52%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT---HLGKVSNPVVIISALLHDTV 143
I KA +FA H RR+ G PYI HP+AVA I LG S I SALLHD V
Sbjct: 39 ITKAFNFARQAHKGVRRR--SGEPYILHPIAVARIACVEIGLGSTS----ICSALLHDVV 92
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 93 EDTDYTVEDIENLFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMNDDIRVILI 152
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 153 KIADRLHNMRTLGSMLP 169
>gi|186685647|ref|YP_001868843.1| (p)ppGpp synthetase I SpoT/RelA [Nostoc punctiforme PCC 73102]
gi|186468099|gb|ACC83900.1| (p)ppGpp synthetase I, SpoT/RelA [Nostoc punctiforme PCC 73102]
Length = 757
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 68 APDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGK 127
+ G+ + DA++ I +A +FA H Q RK G PYI HP+AVA +L LG
Sbjct: 26 STSNGEVEDDRRHSDAVL-IGRAFEFAYQLHQGQYRKS--GEPYIAHPIAVADLLHDLG- 81
Query: 128 VSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ---- 183
+ +I + LHD VEDT+ T +EIE FG VR +VE +T + + Q
Sbjct: 82 -GSAAMIAAGFLHDVVEDTEVTSQEIEERFGAEVRQLVEGVTKLSKINFTSKTESQAENF 140
Query: 184 --ILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGT 239
+ A +VKLAD+LHN+R ++ +E + + RD+ L R
Sbjct: 141 RRMFLAMAQDIRVIVVKLADRLHNMRTLQYM-----SEASRRRSAQETRDIFAPLANRLG 195
Query: 240 NAPIEAELDALFAKYCTPREGRE 262
I+ EL+ L KY P R+
Sbjct: 196 IWRIKWELEDLAFKYLEPEAFRQ 218
>gi|443325885|ref|ZP_21054559.1| (p)ppGpp synthetase, RelA/SpoT family [Xenococcus sp. PCC 7305]
gi|442794512|gb|ELS03925.1| (p)ppGpp synthetase, RelA/SpoT family [Xenococcus sp. PCC 7305]
Length = 750
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/184 (36%), Positives = 89/184 (48%), Gaps = 17/184 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +FA + H Q RK G PYI HPVAVA +L LG + V I + LHD VEDT
Sbjct: 39 ICRAFNFAYNLHEGQYRKS--GEPYIAHPVAVAGLLRDLG--GDCVTIAAGFLHDIVEDT 94
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
D T E+IE FG VR +VE +T K Q + A +VKLA
Sbjct: 95 DITPEQIEEMFGFEVRCLVEGVTKLSKFNFSSTKERQAENFRRMFLAMAQDIRVIVVKLA 154
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R +E P E++ + R++ L R + EL+ L KY P
Sbjct: 155 DRLHNMRTLEHLKP-----EKQRRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPE 209
Query: 259 EGRE 262
RE
Sbjct: 210 AYRE 213
>gi|302537340|ref|ZP_07289682.1| ppGpp synthetase/hydrolase [Streptomyces sp. C]
gi|302446235|gb|EFL18051.1| ppGpp synthetase/hydrolase [Streptomyces sp. C]
Length = 719
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 85/161 (52%), Gaps = 16/161 (9%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PDA ++I+ KA A H H Q RK G PYI HP+AV IL LG + + ++
Sbjct: 86 HHPDADLSILRKAYLLAEHSHRGQMRK--SGEPYITHPLAVTLILAELG--AETTTLTAS 141
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSH 192
LLHDTVEDTD T E++ EFG V +V+ +T D E R ++L A +
Sbjct: 142 LLHDTVEDTDVTLEQVREEFGDEVCFIVDGVTKVEKIDYGAAAEPETFR-KMLVATGNDV 200
Query: 193 EAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
+KLAD+LHN+R + P E++ + RDV+
Sbjct: 201 RVMSIKLADRLHNMRTLGVMRP-----EKQARIAKVTRDVL 236
>gi|416384945|ref|ZP_11684705.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Crocosphaera watsonii WH 0003]
gi|357264961|gb|EHJ13781.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Crocosphaera watsonii WH 0003]
Length = 744
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 50 KPEAPAVEVHVHEARLGEAPDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGT 109
KP+ + +++ L D +SD + I +A +FA H Q RK G
Sbjct: 10 KPQNLTLPDWLNQCLLSHESDKTNSDVDL--------ICRAFNFAYQLHEGQTRK--SGE 59
Query: 110 PYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELT 169
PYI HPVAVA IL LG + +I + LHD VEDTD T E+IE+ FG V +VE +T
Sbjct: 60 PYIAHPVAVAGILRELG--GDKAMIAAGFLHDVVEDTDVTVEDIEQRFGQEVALLVEGVT 117
Query: 170 -------DNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIE 210
NK + E R L A +VKL+D+LHN+R +E
Sbjct: 118 KLSKFNFSNKTEQQAENFRRMFL-AMAKDIRVIVVKLSDRLHNMRTLE 164
>gi|386322287|ref|YP_006018449.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase [Riemerella
anatipestifer RA-GD]
gi|416111274|ref|ZP_11592531.1| GTP pyrophosphokinase [Riemerella anatipestifer RA-YM]
gi|442315095|ref|YP_007356398.1| hypothetical protein G148_1400 [Riemerella anatipestifer RA-CH-2]
gi|315022875|gb|EFT35899.1| GTP pyrophosphokinase [Riemerella anatipestifer RA-YM]
gi|325336830|gb|ADZ13104.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase [Riemerella
anatipestifer RA-GD]
gi|441484018|gb|AGC40704.1| hypothetical protein G148_1400 [Riemerella anatipestifer RA-CH-2]
Length = 735
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 76/136 (55%), Gaps = 14/136 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H QRRK G PYI HP+AVA I+ LG S I ALLHD +
Sbjct: 35 IRKAFDIALDAHKDQRRK--TGEPYIYHPIAVAKIVAEEIGLGATS----IACALLHDVI 88
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSHEAKLVK 198
ED+D T+E+I++ FG ++ S+V LT +N++++ ++L LVK
Sbjct: 89 EDSDYTYEDIKKIFGEKIASIVNGLTKISVMNNQNISIQSENYRKLLLTLSEDFRVILVK 148
Query: 199 LADKLHNLRDIERSLP 214
+AD+LHN+R ++ P
Sbjct: 149 IADRLHNMRTLDSMRP 164
>gi|381341658|dbj|BAL73211.1| putative GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
protein [Ensifer adhaerens]
Length = 175
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 71/131 (54%), Gaps = 6/131 (4%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTT 149
A FA+ H Q+RK +G PYI HP+AVA I+ + P +I +ALLHDTVED+D T
Sbjct: 17 ALQFATRAHGEQKRK-YDGRPYIVHPIAVAEIVRSVP--HTPEMIAAALLHDTVEDSDAT 73
Query: 150 FEEIEREFGPRVRSVVEELTDNK---HMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
E + FGP+V ++V LTD H R RK H + AK VKLAD + N
Sbjct: 74 LLEFKEAFGPKVATLVAWLTDISTPFHGNRQVRKELDRQHLASAPAAAKTVKLADLIDNA 133
Query: 207 RDIERSLPVNW 217
I+ P W
Sbjct: 134 IAIKAGDPNFW 144
>gi|434392415|ref|YP_007127362.1| (p)ppGpp synthetase I, SpoT/RelA [Gloeocapsa sp. PCC 7428]
gi|428264256|gb|AFZ30202.1| (p)ppGpp synthetase I, SpoT/RelA [Gloeocapsa sp. PCC 7428]
Length = 761
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 93/186 (50%), Gaps = 19/186 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A FA H Q RK G PYI HPVAVA +L LG S +I + LHD VEDT
Sbjct: 46 ICRAFSFAYDLHQGQYRKS--GEPYICHPVAVAGLLRDLGGSS--AMIAAGFLHDVVEDT 101
Query: 147 DTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKR---CQILHAPHSSHEAKLVK 198
D + E+IE+ FG VR +VE +T K ++ ER+ ++ A +VK
Sbjct: 102 DVSIEDIEQRFGNEVRQLVEGVTKLSEFSQKFSSKTERQAENFRRMFLAMAKDIRVIVVK 161
Query: 199 LADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCT 256
LAD+LHN+R +E P E++ + R++ L R + EL+ L KY
Sbjct: 162 LADRLHNMRTLEHLAP-----EKQRRIALETREIFAPLANRLGIGRFKWELEDLAFKYLE 216
Query: 257 PREGRE 262
P R+
Sbjct: 217 PEAYRQ 222
>gi|428208449|ref|YP_007092802.1| (p)ppGpp synthetase I SpoT/RelA [Chroococcidiopsis thermalis PCC
7203]
gi|428010370|gb|AFY88933.1| (p)ppGpp synthetase I, SpoT/RelA [Chroococcidiopsis thermalis PCC
7203]
Length = 763
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 93/186 (50%), Gaps = 19/186 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +FA H Q RK G PYI HPVAVA +L LG S +I + LHD VEDT
Sbjct: 45 ICRAFNFAYQLHQGQYRKS--GEPYICHPVAVAGLLRDLGGGS--AMIAAGFLHDVVEDT 100
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMT--------RDERKRCQILHAPHSSHEAKLVK 198
D T E+IE++FG V+ +VE +T + R ++ A +VK
Sbjct: 101 DVTLEDIEQQFGAEVKHLVEGVTKLSKFSETFSSKTERQAENFRRMFLAMAQDIRVIVVK 160
Query: 199 LADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCT 256
LAD+LHN+R +E LP +E++ + R++ L R + EL+ L KY
Sbjct: 161 LADRLHNMRTLEH-LP----DEKRRRIALETREIFAPLANRLGIGTFKWELEDLTFKYLE 215
Query: 257 PREGRE 262
P R+
Sbjct: 216 PEAYRQ 221
>gi|336403941|ref|ZP_08584646.1| hypothetical protein HMPREF0127_01959 [Bacteroides sp. 1_1_30]
gi|335944105|gb|EGN05930.1| hypothetical protein HMPREF0127_01959 [Bacteroides sp. 1_1_30]
Length = 746
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVASIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 92 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|90420858|ref|ZP_01228763.1| GTP pyrophosphokinase, Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Aurantimonas manganoxydans
SI85-9A1]
gi|90334833|gb|EAS48605.1| GTP pyrophosphokinase, Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Aurantimonas manganoxydans
SI85-9A1]
Length = 738
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 19/147 (12%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N +A +A KH Q+R G PY HP+ VA ILT HL + + V
Sbjct: 14 YKPDLDEALLN--RAYVYAMQKHGAQKR--ASGDPYFSHPLEVAAILTEMHLDEATVAV- 68
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
ALLHDT+EDTD T +EI++ FGP++ +VE LT K + +K Q +L A
Sbjct: 69 ---ALLHDTIEDTDATRKEIDQHFGPKIGQLVEGLTKLKRLDLVSKKAAQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDIERSLP 214
LVKLAD+LHN+R + P
Sbjct: 126 IADDIRVLLVKLADRLHNMRTLGHMAP 152
>gi|153807412|ref|ZP_01960080.1| hypothetical protein BACCAC_01691 [Bacteroides caccae ATCC 43185]
gi|423216880|ref|ZP_17203376.1| RelA/SpoT family protein [Bacteroides caccae CL03T12C61]
gi|149129774|gb|EDM20986.1| RelA/SpoT family protein [Bacteroides caccae ATCC 43185]
gi|392629410|gb|EIY23417.1| RelA/SpoT family protein [Bacteroides caccae CL03T12C61]
Length = 748
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVASIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 92 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|253682203|ref|ZP_04863000.1| GTP pyrophosphokinase [Clostridium botulinum D str. 1873]
gi|253561915|gb|EES91367.1| GTP pyrophosphokinase [Clostridium botulinum D str. 1873]
Length = 730
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 100/181 (55%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I+KA ++A + H Q+R G PYI HPV VA IL +G N I ++LLHD +EDT
Sbjct: 21 IIKAYNYAENAHKEQKR--ISGEPYIIHPVEVACILAEMGLDEN--TIAASLLHDVIEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
D T+E++E++F V ++VE +L K T++E++ ++L A L+KLA
Sbjct: 77 DYTYEDVEKDFNIEVANLVEGVTKLGKIKFKTKEEQQSENVRKMLLAMTKDIRVILIKLA 136
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R + + + V +E+ + D+ L R + I+ EL+ L +Y P
Sbjct: 137 DRLHNMRTL-KYMSVEKQKEKAKETL----DIYAPLAHRLGISKIKWELEDLSLRYLNPN 191
Query: 259 E 259
E
Sbjct: 192 E 192
>gi|423294742|ref|ZP_17272869.1| RelA/SpoT family protein [Bacteroides ovatus CL03T12C18]
gi|392675933|gb|EIY69374.1| RelA/SpoT family protein [Bacteroides ovatus CL03T12C18]
Length = 746
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVASIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 92 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|357038708|ref|ZP_09100505.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum gibsoniae DSM
7213]
gi|355359500|gb|EHG07262.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum gibsoniae DSM
7213]
Length = 725
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 86/143 (60%), Gaps = 11/143 (7%)
Query: 78 MHSPDAIMNIVK-ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIIS 136
+++PDA + ++K A FA+ H Q+R G PYI HPVA+ ILT L + +V +
Sbjct: 12 LYNPDADLQLLKRAFAFANEAHAGQKRN--SGEPYITHPVAITTILTDLEMDMDTLV--A 67
Query: 137 ALLHDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERK---RCQILHAPHS 190
LLHDTVEDT TT E+IE+ FG V +V+ +L+ ++ +++ER+ ++ A
Sbjct: 68 GLLHDTVEDTGTTLEDIEKYFGREVAQLVDGVTKLSRLEYRSKEERQVENLRKMFLAMAR 127
Query: 191 SHEAKLVKLADKLHNLRDIERSL 213
L+KLAD+LHN+R ++ L
Sbjct: 128 DIRVVLIKLADRLHNMRTLQYHL 150
>gi|67921546|ref|ZP_00515064.1| RelA/SpoT protein [Crocosphaera watsonii WH 8501]
gi|67856658|gb|EAM51899.1| RelA/SpoT protein [Crocosphaera watsonii WH 8501]
Length = 744
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 84/168 (50%), Gaps = 20/168 (11%)
Query: 50 KPEAPAVEVHVHEARLGEAPDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGT 109
KP+ + +++ L D +SD + I +A +FA H Q RK G
Sbjct: 10 KPQNLTLPDWLNQCLLSHESDKTNSDVDL--------ICRAFNFAYQLHEGQTRK--SGE 59
Query: 110 PYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELT 169
PYI HPVAVA IL LG + +I + LHD VEDTD T E+IE+ FG V +VE +T
Sbjct: 60 PYIAHPVAVAGILRELG--GDKAMIAAGFLHDVVEDTDVTVEDIEQRFGQEVALLVEGVT 117
Query: 170 -------DNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIE 210
NK + E R L A +VKL+D+LHN+R +E
Sbjct: 118 KLSKFNFSNKTEQQAENFRRMFL-AMAKDIRVIVVKLSDRLHNMRTLE 164
>gi|315224227|ref|ZP_07866067.1| GTP diphosphokinase [Capnocytophaga ochracea F0287]
gi|420158371|ref|ZP_14665189.1| RelA/SpoT family protein [Capnocytophaga ochracea str. Holt 25]
gi|314945960|gb|EFS97969.1| GTP diphosphokinase [Capnocytophaga ochracea F0287]
gi|394763720|gb|EJF45790.1| RelA/SpoT family protein [Capnocytophaga ochracea str. Holt 25]
Length = 736
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVEDTDT 148
A D A H QRRK G PYI HP+AVA I+ + +G + V I SALLHD VEDTD
Sbjct: 44 AFDTAVDAHKNQRRKS--GEPYIFHPIAVAKIVASQIG--LDAVAIASALLHDVVEDTDY 99
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T E+IER FG V +VE LT M+R+ Q +L + L+K+AD+
Sbjct: 100 TIEDIERLFGNTVAHIVEGLTKISSMSRENDISLQAENFRKLLLTMNDDVRVILIKIADR 159
Query: 203 LHNLRDIE 210
LHN++ ++
Sbjct: 160 LHNMQTMD 167
>gi|295086609|emb|CBK68132.1| (p)ppGpp synthetase, RelA/SpoT family [Bacteroides xylanisolvens
XB1A]
Length = 746
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVASIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 92 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|153815027|ref|ZP_01967695.1| hypothetical protein RUMTOR_01244 [Ruminococcus torques ATCC 27756]
gi|317501535|ref|ZP_07959731.1| hypothetical protein HMPREF1026_01675 [Lachnospiraceae bacterium
8_1_57FAA]
gi|331088603|ref|ZP_08337514.1| hypothetical protein HMPREF1025_01097 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336440492|ref|ZP_08620079.1| hypothetical protein HMPREF0990_02473 [Lachnospiraceae bacterium
1_1_57FAA]
gi|145847595|gb|EDK24513.1| HD domain protein [Ruminococcus torques ATCC 27756]
gi|316897046|gb|EFV19121.1| hypothetical protein HMPREF1026_01675 [Lachnospiraceae bacterium
8_1_57FAA]
gi|330407560|gb|EGG87060.1| hypothetical protein HMPREF1025_01097 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336012937|gb|EGN42828.1| hypothetical protein HMPREF0990_02473 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 191
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 77/130 (59%), Gaps = 4/130 (3%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +FA+ H Q RK + PYI HP+ V+ I++ + + VI +A+LHDT+ED
Sbjct: 2 INEAIEFAAKAHEGQLRKGTK-KPYIVHPIEVSEIVSAM--TDDEEVICAAVLHDTIEDC 58
Query: 147 -DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
T + ++ FG RV +V + +++K ++ ERK I + E +L+ LADKL N
Sbjct: 59 RGITKDVLKLRFGDRVAELVAQESEDKTLSWKERKSATIARLKDAQREVQLIGLADKLSN 118
Query: 206 LRDIERSLPV 215
+RDI+R PV
Sbjct: 119 MRDIDRDYPV 128
>gi|303232508|ref|ZP_07319195.1| putative GTP diphosphokinase [Atopobium vaginae PB189-T1-4]
gi|302481392|gb|EFL44465.1| putative GTP diphosphokinase [Atopobium vaginae PB189-T1-4]
Length = 829
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 98/183 (53%), Gaps = 22/183 (12%)
Query: 83 AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT---HLGKVSNPVVIISALL 139
A+ I +A DFAS H QRR+ G PYI HPV VA IL H+ + S I SA+L
Sbjct: 90 ALARIDEAYDFASAAHKDQRRQ--SGEPYINHPVEVAFILAKDLHMDEDS----ICSAIL 143
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRC---QILHAPHSSHE 193
HDTVEDT T ++IE FG VR +V+ +LT + + DE++ ++ A
Sbjct: 144 HDTVEDTSATLDDIEERFGYTVRELVDGVTKLTSIEVSSMDEKQALNLRKMFLAMSKDIR 203
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALF 251
++KLAD+LHN+R + +LP E R+T RDV L R + I+ EL+ L
Sbjct: 204 VIIIKLADRLHNMRTLA-ALP----ENRRTFKAKETRDVYAPLADRLGISSIKWELEDLA 258
Query: 252 AKY 254
Y
Sbjct: 259 FLY 261
>gi|293372253|ref|ZP_06618638.1| putative GTP diphosphokinase [Bacteroides ovatus SD CMC 3f]
gi|292632695|gb|EFF51288.1| putative GTP diphosphokinase [Bacteroides ovatus SD CMC 3f]
Length = 746
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVASIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 92 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|237719253|ref|ZP_04549734.1| GTP pyrophosphokinase [Bacteroides sp. 2_2_4]
gi|229451632|gb|EEO57423.1| GTP pyrophosphokinase [Bacteroides sp. 2_2_4]
Length = 746
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVASIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 92 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|160886804|ref|ZP_02067807.1| hypothetical protein BACOVA_04817 [Bacteroides ovatus ATCC 8483]
gi|423289076|ref|ZP_17267927.1| RelA/SpoT family protein [Bacteroides ovatus CL02T12C04]
gi|156107215|gb|EDO08960.1| RelA/SpoT family protein [Bacteroides ovatus ATCC 8483]
gi|392668840|gb|EIY62334.1| RelA/SpoT family protein [Bacteroides ovatus CL02T12C04]
Length = 746
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVASIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 92 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|299148323|ref|ZP_07041385.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Bacteroides sp. 3_1_23]
gi|298513084|gb|EFI36971.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Bacteroides sp. 3_1_23]
Length = 746
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVASIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 92 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|262408302|ref|ZP_06084849.1| GTP pyrophosphokinase [Bacteroides sp. 2_1_22]
gi|294805883|ref|ZP_06764753.1| putative GTP diphosphokinase [Bacteroides xylanisolvens SD CC 1b]
gi|345512133|ref|ZP_08791670.1| GTP pyrophosphokinase [Bacteroides sp. D1]
gi|229445634|gb|EEO51425.1| GTP pyrophosphokinase [Bacteroides sp. D1]
gi|262353854|gb|EEZ02947.1| GTP pyrophosphokinase [Bacteroides sp. 2_1_22]
gi|294446912|gb|EFG15509.1| putative GTP diphosphokinase [Bacteroides xylanisolvens SD CC 1b]
Length = 746
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVASIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 92 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|225871285|ref|YP_002747232.1| GTP pyrophosphokinase [Streptococcus equi subsp. equi 4047]
gi|225700689|emb|CAW95287.1| GTP pyrophosphokinase [Streptococcus equi subsp. equi 4047]
Length = 739
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 73/133 (54%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA D+A+ H +Q RK G PYI HP+ VA IL L + V ++ LHD VEDT
Sbjct: 28 VQKALDYATAAHFYQVRK--SGEPYIVHPIQVAAILADLH--LDAVTVVCGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLV 197
D T E+IE +FG VR +V+ +T + + + RK +L A LV
Sbjct: 84 DITLEDIEFDFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILV 140
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 141 KLADRLHNMRTLK 153
>gi|298480312|ref|ZP_06998510.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Bacteroides sp. D22]
gi|298273593|gb|EFI15156.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Bacteroides sp. D22]
Length = 746
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVASIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 92 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|72383394|ref|YP_292749.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. NATL2A]
gi|72003244|gb|AAZ59046.1| metal dependent phosphohydrolase [Prochlorococcus marinus str.
NATL2A]
Length = 775
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 93/185 (50%), Gaps = 19/185 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+V A D A H Q RK G PYI HPVAVA +L +G ++ VI + LHD VEDT
Sbjct: 69 LVAAFDLAYQLHKGQFRKS--GEPYITHPVAVADLLREIG--ASASVIAAGFLHDVVEDT 124
Query: 147 DTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
D T E++E FG VR +VE +T +N+ + E R L A S LVKL
Sbjct: 125 DITPEQLEGYFGSEVRYLVEGVTKLGGIHFNNRTEAQAENLRKMFL-AMSSDIRVVLVKL 183
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTP 257
AD+LHN+R I EE++T+ R++ L R ++ EL+ L K P
Sbjct: 184 ADRLHNMRTISY-----LGEEKQTRIARETREIYAPLANRLGIGRLKWELEDLAFKLLEP 238
Query: 258 REGRE 262
RE
Sbjct: 239 DPFRE 243
>gi|390629433|ref|ZP_10257428.1| GTP diphosphokinase [Weissella confusa LBAE C39-2]
gi|390485337|emb|CCF29776.1| GTP diphosphokinase [Weissella confusa LBAE C39-2]
Length = 744
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 86/152 (56%), Gaps = 10/152 (6%)
Query: 62 EARLGEAPDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHI 121
EA++ A + D +G + D + + KA DFA + H Q+RK G PYI HP+ VA I
Sbjct: 3 EAKVLTAQEVHDLVAGYMNEDHVKKVDKAYDFAYNLHKEQKRK--SGEPYIIHPIQVAGI 60
Query: 122 LTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD-NKHMTRDERK 180
L L +P +++ LHD VEDT+ T E++EREFG V +V+ ++ +K + R+
Sbjct: 61 LADLH--MDPDTVVAGYLHDVVEDTEATLEDVEREFGHDVAVIVDGVSKLSKIEYKSSRE 118
Query: 181 RC-----QILHAPHSSHEAKLVKLADKLHNLR 207
+ ++L A +VKLAD+LHN+R
Sbjct: 119 QLAENHRKLLLAMSHDIRVIIVKLADRLHNMR 150
>gi|154496367|ref|ZP_02035063.1| hypothetical protein BACCAP_00655 [Bacteroides capillosus ATCC
29799]
gi|150274450|gb|EDN01527.1| GTP diphosphokinase [Pseudoflavonifractor capillosus ATCC 29799]
Length = 741
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ A +A + H Q RKD G+PYI HP+AVA I+ L ++ II+ALLHDT+EDT
Sbjct: 27 LFDAFTYADNAHSSQLRKD--GSPYITHPLAVAEIVADLELDTDS--IIAALLHDTIEDT 82
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
T E+I + FGP V ++VE +LT ++ +++E + ++L A L+K+
Sbjct: 83 GATHEDIAKRFGPTVANLVEGVTKLTRVQYTSKEEEQMENLRKMLMAMAKDIRVILIKIC 142
Query: 201 DKLHNLRDIERSLP 214
D+LHN+R +E P
Sbjct: 143 DRLHNMRTMEYQSP 156
>gi|331002511|ref|ZP_08326029.1| hypothetical protein HMPREF0491_00891 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330410327|gb|EGG89761.1| hypothetical protein HMPREF0491_00891 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 182
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/121 (43%), Positives = 71/121 (58%), Gaps = 3/121 (2%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA FA H Q RK PYI HP+ V I++ + + V I+ALLHDTVEDT
Sbjct: 2 IEKAVKFAIKAHEGQFRKGS-TIPYIIHPLEVCTIVSLM--TEDMDVRIAALLHDTVEDT 58
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T EEIE+EFG +V ++V + +++K + ERK I H S E K++ L DKL N+
Sbjct: 59 AVTIEEIEKEFGAKVATLVGKESEDKSKSWIERKMHTIEHLKSESIEVKMIALGDKLSNI 118
Query: 207 R 207
R
Sbjct: 119 R 119
>gi|270283852|ref|ZP_05965102.2| GTP diphosphokinase [Bifidobacterium gallicum DSM 20093]
gi|270277566|gb|EFA23420.1| GTP diphosphokinase [Bifidobacterium gallicum DSM 20093]
Length = 789
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIVK-ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P M++V+ A + A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 44 HHPGEDMSMVRRAYERAVLQHSDQRRK--SGEPYIIHPMAVAQILADLGM--GPIVVAAG 99
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T EE EFG V +V+ +T M + + + + A
Sbjct: 100 LLHDTVEDTDYTLEECRAEFGDTVTGLVDGVTKLTKMDVGDSAQAETIRKMVVAMSRDVR 159
Query: 194 AKLVKLADKLHNLR 207
+VKLAD++HN R
Sbjct: 160 VLVVKLADRVHNAR 173
>gi|393786686|ref|ZP_10374818.1| RelA/SpoT family protein [Bacteroides nordii CL02T12C05]
gi|392657921|gb|EIY51551.1| RelA/SpoT family protein [Bacteroides nordii CL02T12C05]
Length = 749
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 39 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVAKIVCNEIGLGSTS----ICAALLHDVV 92
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L L+
Sbjct: 93 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 152
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 153 KIADRLHNMRTLGSMLP 169
>gi|317056335|ref|YP_004104802.1| (p)ppGpp synthetase I SpoT/RelA [Ruminococcus albus 7]
gi|315448604|gb|ADU22168.1| (p)ppGpp synthetase I, SpoT/RelA [Ruminococcus albus 7]
Length = 762
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 76/129 (58%), Gaps = 10/129 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
IV A + A HH Q+R+ G PYI HP+AV +IL LG ++ I +ALLHD VEDT
Sbjct: 60 IVSAYELAEKYHHDQKRE--SGEPYISHPIAVGYILLELGMDTD--TICAALLHDVVEDT 115
Query: 147 DTTFEEIEREFGPRVRSVVEELT---DNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
D T E++ + FG V +V +T + + T+DE+K +IL A ++KLA
Sbjct: 116 DCTLEQLHKMFGIDVTMLVNGVTKLGEVEIFTKDEQKAENIRKILLAMSEDIRVIIIKLA 175
Query: 201 DKLHNLRDI 209
D+LHN+R +
Sbjct: 176 DRLHNMRTL 184
>gi|429755166|ref|ZP_19287838.1| putative GTP diphosphokinase [Capnocytophaga sp. oral taxon 324
str. F0483]
gi|429175577|gb|EKY17014.1| putative GTP diphosphokinase [Capnocytophaga sp. oral taxon 324
str. F0483]
Length = 732
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVEDTDT 148
A D A H QRRK G PYI HP+AVA I+ + +G + V I SALLHD VEDTD
Sbjct: 40 AFDTAVDAHKDQRRKS--GEPYIFHPIAVAKIVASQIG--LDAVAIASALLHDVVEDTDY 95
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T E+IER FG V +VE LT M+R+ Q +L + L+K+AD+
Sbjct: 96 TIEDIERLFGNTVAHIVEGLTKISSMSRENDISLQAENFRKLLLTMNDDVRVILIKIADR 155
Query: 203 LHNLRDIE 210
LHN++ ++
Sbjct: 156 LHNMQTMD 163
>gi|434400053|ref|YP_007134057.1| (p)ppGpp synthetase I, SpoT/RelA [Stanieria cyanosphaera PCC 7437]
gi|428271150|gb|AFZ37091.1| (p)ppGpp synthetase I, SpoT/RelA [Stanieria cyanosphaera PCC 7437]
Length = 745
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/184 (36%), Positives = 93/184 (50%), Gaps = 17/184 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +FA H Q RK G PYI HPVAVA +L LG + V I + LHD VEDT
Sbjct: 39 ICRAFNFAYQLHEGQYRKS--GEPYIAHPVAVAGLLRDLG--GDSVTIAAGFLHDVVEDT 94
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
+ T EEIE FG VR +VE +L+ ++ ER+ ++ + +VKLA
Sbjct: 95 EVTPEEIEERFGTDVRQLVEGVTKLSKFNFSSKTERQAENFRRMFLSMAKDIRVIVVKLA 154
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R +E P E++ + R++ L R + EL+ L KY P
Sbjct: 155 DRLHNMRTLEHLKP-----EKQQRIALETREIFAPLANRLGIGRFKWELEDLSFKYLEPE 209
Query: 259 EGRE 262
RE
Sbjct: 210 AYRE 213
>gi|423212128|ref|ZP_17198657.1| RelA/SpoT family protein [Bacteroides xylanisolvens CL03T12C04]
gi|392695016|gb|EIY88241.1| RelA/SpoT family protein [Bacteroides xylanisolvens CL03T12C04]
Length = 684
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVASIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 92 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|294645929|ref|ZP_06723600.1| RelA/SpoT family protein [Bacteroides ovatus SD CC 2a]
gi|292638729|gb|EFF57076.1| RelA/SpoT family protein [Bacteroides ovatus SD CC 2a]
Length = 609
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 25 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVASIVCNEIGLGSTS----ICAALLHDVV 78
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 79 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 138
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 139 KIADRLHNMRTLGSMLP 155
>gi|427717556|ref|YP_007065550.1| (p)ppGpp synthetase I SpoT/RelA [Calothrix sp. PCC 7507]
gi|427349992|gb|AFY32716.1| (p)ppGpp synthetase I, SpoT/RelA [Calothrix sp. PCC 7507]
Length = 756
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 97/196 (49%), Gaps = 19/196 (9%)
Query: 75 DSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVI 134
D HS DA++ I +A FA H Q RK G PYI HPVAVA +L LG + +I
Sbjct: 34 DDRRHS-DAVL-IGEAFKFAYRLHQGQYRKS--GEPYICHPVAVAGLLRDLG--GSAAMI 87
Query: 135 ISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAP 188
+ LHD VEDTD T E+I FGP VR +VE +T + + Q + +
Sbjct: 88 AAGFLHDVVEDTDVTIEQIGELFGPEVRQLVEGVTKLSKINFKSKTESQAENFRRMFLSM 147
Query: 189 HSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAE 246
+VKLAD+LHN+R ++ +P ++++ + RD+ L R + E
Sbjct: 148 AQDIRVIVVKLADRLHNMRTLQ-VMP----DDKRRRIAQETRDIFAPLANRLGIWHFKWE 202
Query: 247 LDALFAKYCTPREGRE 262
L+ L KY P RE
Sbjct: 203 LEDLSFKYLEPESFRE 218
>gi|33860751|ref|NP_892312.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33633693|emb|CAE18650.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 769
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
IVKA A H+ Q R G PYI HP+AVA +L +G S+ V+ + LLHD VEDT
Sbjct: 63 IVKAFKLAYEAHNGQLR--ASGEPYIIHPLAVADLLKEIGASSS--VVAAGLLHDVVEDT 118
Query: 147 DTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
EIE FG V+ +VE +T +N+ + E R L A S LVKL
Sbjct: 119 GIALSEIEVNFGLEVKVLVEGVTKLGGIHFNNRTEAQAENLRKMFL-AMASDIRVVLVKL 177
Query: 200 ADKLHNLRDIERSLPVNW-TEERKTQYFNWARDVVQGLR---GTNAPIEAELDALFAKYC 255
AD+LHN+R I+ W EERK + R++ L G N + EL+ L K+
Sbjct: 178 ADRLHNMRTIQ------WLNEERKERIARETREIYAPLANRLGINR-FKWELEDLAFKFL 230
Query: 256 TPRE 259
P E
Sbjct: 231 EPEE 234
>gi|409098050|ref|ZP_11218074.1| RelA/SpoT family protein [Pedobacter agri PB92]
Length = 735
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 70/133 (52%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H RRK G PYI HP+AVA I LG S I+ ALLHD V
Sbjct: 39 IRKAFDMALESHKDMRRK--SGEPYIYHPIAVAQIAAEEIGLGTTS----IVCALLHDVV 92
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT------DNKHMTRDERKRCQILHAPHSSHEAKLV 197
EDTD T E+IEREFG + +++ LT D + E R +L L+
Sbjct: 93 EDTDITLEDIEREFGKKTAKIIDGLTKISGVFDTNSSLQAENFRKMLLTLADDVR-VILI 151
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 152 KLADRLHNMRTMD 164
>gi|126660186|ref|ZP_01731304.1| (p)ppGpp 3'-pyrophosphohydrolase [Cyanothece sp. CCY0110]
gi|126618551|gb|EAZ89302.1| (p)ppGpp 3'-pyrophosphohydrolase [Cyanothece sp. CCY0110]
Length = 744
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 99/207 (47%), Gaps = 22/207 (10%)
Query: 65 LGEAPDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH 124
L E + +SD D I +A +FA H Q RK G PYI HPVAVA IL
Sbjct: 20 LNECLISHESDQNNQDLDLI---CRAFNFAYKLHEGQARK--SGEPYIAHPVAVAGILRD 74
Query: 125 LGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-------DNKHMTRD 177
LG + +I + LHD VEDTD T EEIE FG V +VE +T NK +
Sbjct: 75 LG--GDKAMIAAGFLHDVVEDTDVTVEEIEEMFGHEVALLVEGVTKLSKFNFSNKTEQQA 132
Query: 178 ERKRCQILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL- 236
E R L A +VKLAD+LHN+R +E P E++ + +++ L
Sbjct: 133 ENFRRMFL-AMAKDIRVIVVKLADRLHNMRTLEPLRP-----EKQRRIARETKEIFAPLA 186
Query: 237 -RGTNAPIEAELDALFAKYCTPREGRE 262
R ++ EL+ L KY P + RE
Sbjct: 187 NRLGIWRVKWELEDLSFKYLEPEDYRE 213
>gi|149280729|ref|ZP_01886838.1| GTP diphosphokinase (guanosine 3',5'-polyphosphate synthase)
[Pedobacter sp. BAL39]
gi|149228512|gb|EDM33922.1| GTP diphosphokinase (guanosine 3',5'-polyphosphate synthase)
[Pedobacter sp. BAL39]
Length = 736
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 70/133 (52%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H RRK G PYI HP+AVA I LG S I+ ALLHD V
Sbjct: 39 IRKAFDMALESHKNMRRK--SGEPYIYHPIAVAQIAAEEVGLGTTS----IVCALLHDVV 92
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT------DNKHMTRDERKRCQILHAPHSSHEAKLV 197
EDTD T E+IEREFG + +++ LT D + E R +L L+
Sbjct: 93 EDTDITLEDIEREFGKKTAKIIDGLTKISGVFDYNSSLQAENFRKMLLTLADDVR-VILI 151
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 152 KLADRLHNMRTMD 164
>gi|119493798|ref|ZP_01624366.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Lyngbya
sp. PCC 8106]
gi|119452440|gb|EAW33628.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Lyngbya
sp. PCC 8106]
Length = 755
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 79/147 (53%), Gaps = 13/147 (8%)
Query: 71 TGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSN 130
+S S PD+ + + +A +FA H Q RK G PYI HP+AVA +L +LG S
Sbjct: 29 NNNSCSDQSCPDSEI-VCRAFEFAYKLHEGQYRKS--GEPYINHPIAVAGLLRYLG--SE 83
Query: 131 PVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQ 183
VI + LHD +EDT+ T +E+E FG VR +VE +T NK + E R
Sbjct: 84 GTVIAAGFLHDIIEDTEVTPDELESHFGSEVRQLVEGVTKLSKFNFSNKTERQAENFRRM 143
Query: 184 ILHAPHSSHEAKLVKLADKLHNLRDIE 210
L A +VKLAD+LHN+R +E
Sbjct: 144 FL-AMAKDIRVIVVKLADRLHNMRTLE 169
>gi|296444869|ref|ZP_06886831.1| (p)ppGpp synthetase I, SpoT/RelA [Methylosinus trichosporium OB3b]
gi|296257537|gb|EFH04602.1| (p)ppGpp synthetase I, SpoT/RelA [Methylosinus trichosporium OB3b]
Length = 737
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 74/127 (58%), Gaps = 10/127 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q R G PY HP+ VA ILT L K+ + I++A+LHDTVEDT +
Sbjct: 25 RAYVYAMKAHGQQTRA--SGDPYFSHPLEVAAILTDL-KLDD-ATIVAAVLHDTVEDTSS 80
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T +EIER FGP++R +V+ LT + + +K Q +L A LVKLAD+
Sbjct: 81 TLDEIERLFGPQIRKLVDGLTKIEKLDLVSKKAAQGENFRKLLLAVSEDVRVLLVKLADR 140
Query: 203 LHNLRDI 209
LHN+R +
Sbjct: 141 LHNMRTL 147
>gi|239827847|ref|YP_002950471.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. WCH70]
gi|239808140|gb|ACS25205.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. WCH70]
Length = 732
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 99/181 (54%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA +FA+H H Q RK G PYI HP+ VA IL L +P I + LHD VEDT
Sbjct: 28 IKKAYEFANHAHRDQYRKS--GEPYIIHPIQVAGILVDLK--MDPATIAAGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERK---RCQILHAPHSSHEAKLVKLA 200
+ T E++EREFG V +V+ +L K+ +++E++ ++ A L+KLA
Sbjct: 84 EATKEDLEREFGSEVAMLVDGVTKLGKIKYKSQEEQQAENHRKMFLAMAQDIRVILIKLA 143
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R + + LP+ E++ + N ++ L R + I+ EL+ +Y P+
Sbjct: 144 DRLHNMRTL-KHLPI----EKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQ 198
Query: 259 E 259
+
Sbjct: 199 Q 199
>gi|254432294|ref|ZP_05045997.1| RelA/SpoT family protein [Cyanobium sp. PCC 7001]
gi|197626747|gb|EDY39306.1| RelA/SpoT family protein [Cyanobium sp. PCC 7001]
Length = 826
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 74/135 (54%), Gaps = 12/135 (8%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
DA + A DFA H Q R G PYI HPVAVA +L +G ++ VI + LHD
Sbjct: 108 DAEALLASAFDFAYQLHEGQYRAS--GEPYIVHPVAVADLLRDIGASAS--VIAAGFLHD 163
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTD-------NKHMTRDERKRCQILHAPHSSHEA 194
VEDT+ T +E+E+ FG VR++VE +T NK + E R L A S
Sbjct: 164 VVEDTEVTPDELEQHFGAEVRALVEGVTKLGGIHFTNKTEAQAENLRRMFL-AMASDIRV 222
Query: 195 KLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 223 VLVKLADRLHNMRTL 237
>gi|423221385|ref|ZP_17207855.1| RelA/SpoT family protein [Bacteroides cellulosilyticus CL02T12C19]
gi|392646484|gb|EIY40198.1| RelA/SpoT family protein [Bacteroides cellulosilyticus CL02T12C19]
Length = 771
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 60 ITKAFNFANQAHKGIKRR--SGEPYIMHPLAVAQIVCNEIGLGSTS----ICAALLHDVV 113
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L L+
Sbjct: 114 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 173
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 174 KIADRLHNMRTLGSMLP 190
>gi|255531112|ref|YP_003091484.1| RelA/SpoT family protein [Pedobacter heparinus DSM 2366]
gi|255344096|gb|ACU03422.1| RelA/SpoT family protein [Pedobacter heparinus DSM 2366]
Length = 735
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 70/133 (52%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H RRK G PYI HP+AVA I LG S I+ ALLHD V
Sbjct: 39 IRKAFDMALESHKNMRRK--SGEPYIYHPIAVAQIAAEEIGLGTTS----IVCALLHDVV 92
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT------DNKHMTRDERKRCQILHAPHSSHEAKLV 197
EDTD T E+IEREFG + +++ LT D + E R +L L+
Sbjct: 93 EDTDITLEDIEREFGKKTAKIIDGLTKISGVFDYNSSLQAENFRKMLLTLADDVR-VILI 151
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 152 KLADRLHNMRTMD 164
>gi|167764979|ref|ZP_02437100.1| hypothetical protein BACSTE_03372 [Bacteroides stercoris ATCC
43183]
gi|167697648|gb|EDS14227.1| RelA/SpoT family protein [Bacteroides stercoris ATCC 43183]
Length = 752
Score = 84.0 bits (206), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 41 ITKAFNFANQAHKGIKRR--SGEPYIMHPIAVAKIVCNEIGLGSTS----ICAALLHDVV 94
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L L+
Sbjct: 95 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 154
Query: 198 KLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQ-----GLRGTNAPIEAELDALFA 252
K+AD+LHN+R + LP + F A + + R I+ EL+ L
Sbjct: 155 KIADRLHNMRTLGSMLP--------NKQFKIAGETLYIYAPLANRLGLYKIKTELENLSF 206
Query: 253 KYCTPREGRENE 264
+Y P E RE E
Sbjct: 207 RYEHPEEYREIE 218
>gi|427418396|ref|ZP_18908579.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 7375]
gi|425761109|gb|EKV01962.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 7375]
Length = 763
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 75/146 (51%), Gaps = 11/146 (7%)
Query: 72 GDSDSGMHSP-DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSN 130
GDS + P D + +A +FA H Q R G PYI HPVAVA+IL LG +
Sbjct: 33 GDSQVPLERPKDNNQLVCRAFEFAYQLHKGQMR--ASGEPYIAHPVAVANILRSLG--GD 88
Query: 131 PVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQI 184
+I + LHD VEDTD + +EIE FG VR +VE +T N R ++
Sbjct: 89 SAMIAAGFLHDVVEDTDVSADEIEAHFGAEVRQMVEGVTKLSKFQFNSKTERQAENFRRM 148
Query: 185 LHAPHSSHEAKLVKLADKLHNLRDIE 210
A +VKLAD+LHN+R ++
Sbjct: 149 FLAMAQDIRVIVVKLADRLHNMRTLQ 174
>gi|224538091|ref|ZP_03678630.1| hypothetical protein BACCELL_02981 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520302|gb|EEF89407.1| hypothetical protein BACCELL_02981 [Bacteroides cellulosilyticus
DSM 14838]
Length = 762
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 51 ITKAFNFANQAHKGIKRR--SGEPYIMHPLAVAQIVCNEIGLGSTS----ICAALLHDVV 104
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L L+
Sbjct: 105 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 164
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 165 KIADRLHNMRTLGSMLP 181
>gi|78185706|ref|YP_378140.1| metal dependent phosphohydrolase [Synechococcus sp. CC9902]
gi|78170000|gb|ABB27097.1| metal dependent phosphohydrolase [Synechococcus sp. CC9902]
Length = 776
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 76/144 (52%), Gaps = 12/144 (8%)
Query: 72 GDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNP 131
G S P+A++ V A DF H Q R G PYI HPVAVA +L +G S P
Sbjct: 56 GAGQSCPTDPEALL--VSAFDFGFQLHEGQFR--ASGDPYIVHPVAVADLLRDIG-ASAP 110
Query: 132 VVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------IL 185
V I + LHD VEDTD + +EI+ FG VR +VE +T + ++R Q +
Sbjct: 111 V-IAAGFLHDVVEDTDVSLDEIQEHFGSEVRELVEGVTKLGGIHFNDRTEAQAENLRRMF 169
Query: 186 HAPHSSHEAKLVKLADKLHNLRDI 209
A S LVKLAD++HN+R +
Sbjct: 170 MAMASDIRVVLVKLADRVHNMRTL 193
>gi|84684014|ref|ZP_01011916.1| RelA/SpoT family protein [Maritimibacter alkaliphilus HTCC2654]
gi|84667767|gb|EAQ14235.1| RelA/SpoT family protein [Rhodobacterales bacterium HTCC2654]
Length = 707
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 77/138 (55%), Gaps = 11/138 (7%)
Query: 79 HSPDAIMNIVKAT-DFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++P + ++++A D+ H Q R G PY HP+AVAHIL + + II+A
Sbjct: 16 YNPKSNSDLIRAAFDYGRRMHEGQYRH--SGEPYFTHPIAVAHILAE--QQLDDATIITA 71
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD--NKHMTRDERKRCQ----ILHAPHSS 191
LLHDT+EDT +T+ E+ FGP V +V+ +T N ++ E K+ + + A
Sbjct: 72 LLHDTIEDTGSTYSEVSERFGPDVAELVDGVTKLTNLQLSSTETKQAENFRKLFMAMSKD 131
Query: 192 HEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R I
Sbjct: 132 LRVILVKLADRLHNMRTI 149
>gi|452909791|ref|ZP_21958475.1| GTP pyrophosphokinase [Kocuria palustris PEL]
gi|452835163|gb|EME37960.1| GTP pyrophosphokinase [Kocuria palustris PEL]
Length = 877
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++PD + ++ +A A +H Q+RK G PYI HPVAV IL LG ++ PV +++A
Sbjct: 160 NAPDEDLAVLQRAFSVADERHQGQKRK--SGDPYITHPVAVTTILAELG-MTGPV-LVAA 215
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T E++ EFG V ++V+ +T + + + + + A
Sbjct: 216 LLHDTVEDTDYTLEDLTEEFGEEVAALVDGVTKLDKVQYGDNAQAETVRKMIVAMAKDIR 275
Query: 194 AKLVKLADKLHNLR 207
L+KLAD+LHN R
Sbjct: 276 VLLIKLADRLHNAR 289
>gi|189468139|ref|ZP_03016924.1| hypothetical protein BACINT_04534 [Bacteroides intestinalis DSM
17393]
gi|189436403|gb|EDV05388.1| RelA/SpoT family protein [Bacteroides intestinalis DSM 17393]
Length = 752
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 11/135 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVED 145
I KA +FA+ H +R+ G PYI HP+AVA I+ T +G S I +ALLHD VED
Sbjct: 41 ITKAFNFANQAHKGIKRR--SGEPYIMHPLAVAQIVCTEIGLGSTS--ICAALLHDVVED 96
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKL 199
TD T E+IE FGP++ +V+ LT +R Q +L L+K+
Sbjct: 97 TDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILIKI 156
Query: 200 ADKLHNLRDIERSLP 214
AD+LHN+R + LP
Sbjct: 157 ADRLHNMRTLGSMLP 171
>gi|124024980|ref|YP_001014096.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. NATL1A]
gi|123960048|gb|ABM74831.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. NATL1A]
Length = 778
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 72/130 (55%), Gaps = 12/130 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+V A D A H Q RK G PYI HPVAVA +L +G ++ VI + LHD VEDT
Sbjct: 69 LVAAFDLAYQLHKGQFRKS--GEPYITHPVAVADLLREIG--ASASVIAAGFLHDVVEDT 124
Query: 147 DTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
D T E++E FG VR +VE +T +N+ + E R L A S LVKL
Sbjct: 125 DITPEQLEGYFGSEVRYLVEGVTKLGGIHFNNRTEAQAENLRKMFL-AMSSDIRVVLVKL 183
Query: 200 ADKLHNLRDI 209
AD+LHN+R I
Sbjct: 184 ADRLHNMRTI 193
>gi|427387173|ref|ZP_18883229.1| RelA/SpoT family protein [Bacteroides oleiciplenus YIT 12058]
gi|425725778|gb|EKU88647.1| RelA/SpoT family protein [Bacteroides oleiciplenus YIT 12058]
Length = 771
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 74/135 (54%), Gaps = 11/135 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVED 145
I KA +FA+ H +R+ G PYI HP+AVA I+ T +G S I +ALLHD VED
Sbjct: 60 ITKAFNFANQAHKGIKRRS--GEPYIMHPLAVAQIVCTEIGLGSTS--ICAALLHDVVED 115
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKL 199
TD T E+IE FGP++ +V+ LT +R Q +L L+K+
Sbjct: 116 TDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILIKI 175
Query: 200 ADKLHNLRDIERSLP 214
AD+LHN+R + LP
Sbjct: 176 ADRLHNMRTLGSMLP 190
>gi|399025664|ref|ZP_10727654.1| (p)ppGpp synthetase, RelA/SpoT family [Chryseobacterium sp. CF314]
gi|398077637|gb|EJL68605.1| (p)ppGpp synthetase, RelA/SpoT family [Chryseobacterium sp. CF314]
Length = 736
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 76/134 (56%), Gaps = 10/134 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVED 145
I KA D A H QRRK G PYI HP+AVA I+ T +G I ALLHD +ED
Sbjct: 35 IRKAFDIALDAHKDQRRKS--GEPYIYHPIAVAKIVATEIG--LGATSIACALLHDVIED 90
Query: 146 TDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSHEAKLVKLA 200
+D T+E++++ FGP++ +V LT ++++++ ++L L+K+A
Sbjct: 91 SDYTYEDLKKIFGPKISDIVNGLTKISIMNHQNISVQSENYRKLLLTLSEDFRVILIKIA 150
Query: 201 DKLHNLRDIERSLP 214
D+LHN+R +E P
Sbjct: 151 DRLHNMRTLESMAP 164
>gi|330833705|ref|YP_004402530.1| GTP pyrophosphokinase [Streptococcus suis ST3]
gi|386585110|ref|YP_006081513.1| GTP pyrophosphokinase [Streptococcus suis D9]
gi|329307928|gb|AEB82344.1| GTP pyrophosphokinase [Streptococcus suis ST3]
gi|353737256|gb|AER18265.1| GTP pyrophosphokinase [Streptococcus suis D9]
Length = 733
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA DFA+ H Q RK G PYI HP+ VA IL G + V + LHD VEDT
Sbjct: 27 VQKALDFATEAHKLQFRKS--GEPYIVHPIQVAGILA--GLKLDAVTVACGFLHDVVEDT 82
Query: 147 DTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHEAKLVKLA 200
D T +++E EFGP VR +V +T H + +L A LVKLA
Sbjct: 83 DVTLDDMEAEFGPEVRHIVGGVTKLGKVEYKSHEEQLAENHRNMLIAMSQDMRVILVKLA 142
Query: 201 DKLHNLRDIE 210
D+LHN+R ++
Sbjct: 143 DRLHNMRTLK 152
>gi|302388167|ref|YP_003823989.1| metal dependent phosphohydrolase [Clostridium saccharolyticum WM1]
gi|302198795|gb|ADL06366.1| metal dependent phosphohydrolase [Clostridium saccharolyticum WM1]
Length = 176
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 84/157 (53%), Gaps = 10/157 (6%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA FA H RK + PYI HP+ A I+ + V++ +I +ALLHD VEDT
Sbjct: 4 KAVAFAIKSHEGTFRKGTK-IPYIVHPLETAVIVALM--VTDEEMICAALLHDVVEDTGV 60
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRD 208
T E++ EFG RV +V E T++K ERK + H +S E+K++ LADKL NLR
Sbjct: 61 TEAELKEEFGSRVAELVMEETEDKTKCWKERKSATLEHLEQASRESKILVLADKLSNLRA 120
Query: 209 IER-------SLPVNWTEERKTQYFNWARDVVQGLRG 238
R L + E+ K+++ + + V + L G
Sbjct: 121 TARDYYLMGDDLWQRFNEKNKSEHAWYYKGVAKRLTG 157
>gi|358061720|ref|ZP_09148374.1| hypothetical protein HMPREF9473_00436 [Clostridium hathewayi
WAL-18680]
gi|356700479|gb|EHI61985.1| hypothetical protein HMPREF9473_00436 [Clostridium hathewayi
WAL-18680]
Length = 177
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 72/125 (57%), Gaps = 3/125 (2%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A FA H RK PYI HP+ A I++ + + ++++ALLHD +EDT
Sbjct: 2 IEEAVAFARRAHAGAVRKGT-NIPYITHPMETAVIISLM--TEDEDLVVAALLHDVIEDT 58
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
D T EE+E FG RV +V E T++K + ERK + H H++ E K++ LADKL NL
Sbjct: 59 DVTPEELEERFGRRVTELVLEETEDKSGSWFERKSATVEHLKHATLENKMLTLADKLSNL 118
Query: 207 RDIER 211
R R
Sbjct: 119 RSTAR 123
>gi|336415594|ref|ZP_08595933.1| hypothetical protein HMPREF1017_03041 [Bacteroides ovatus
3_8_47FAA]
gi|335940473|gb|EGN02340.1| hypothetical protein HMPREF1017_03041 [Bacteroides ovatus
3_8_47FAA]
Length = 746
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 74/137 (54%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVASIVCDEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L + L+
Sbjct: 92 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSNDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|113476259|ref|YP_722320.1| (p)ppGpp synthetase I SpoT/RelA [Trichodesmium erythraeum IMS101]
gi|110167307|gb|ABG51847.1| (p)ppGpp synthetase I, SpoT/RelA [Trichodesmium erythraeum IMS101]
Length = 750
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 93/185 (50%), Gaps = 19/185 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +FA H Q RK G PYI HPVAVA +L +LG + +I + LLHD VEDT
Sbjct: 43 ICRAFEFAYKLHEGQYRKS--GEPYICHPVAVAGLLKYLG--GDSTMIAAGLLHDIVEDT 98
Query: 147 DTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
D EEIE +FG V +VE +T NK + E R L A +VKL
Sbjct: 99 DVKIEEIEEKFGSEVTLLVEGVTKLSKFNFSNKTELQAENFRRMFL-AMAKDIRVIVVKL 157
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTP 257
AD+LHN+R ++ LP + + + R++ L R I+ EL+ L KY P
Sbjct: 158 ADRLHNMRTLQH-LPSHKQLSKALE----TREIFAPLANRLGIGRIKWELEDLSFKYLEP 212
Query: 258 REGRE 262
RE
Sbjct: 213 NAYRE 217
>gi|220904804|ref|YP_002480116.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219869103|gb|ACL49438.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 719
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 78/140 (55%), Gaps = 13/140 (9%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H+PDA + ++ KA +A+ H Q R G PY+ HP+AVA L +G + +++
Sbjct: 14 HNPDADLELIQKAYVYAATAHAGQTR--LSGEPYLSHPLAVADTLAEMG--FDESTVVAG 69
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHS 190
LLHDTVEDT T EE++ FG V +V+ +T +NK + E R IL H
Sbjct: 70 LLHDTVEDTKATLEELDENFGEDVADIVDGVTKISMIPFENKEEAQAENIRKMILAMSHD 129
Query: 191 SHEAKLVKLADKLHNLRDIE 210
+VKLAD+LHN+R ++
Sbjct: 130 MR-VLMVKLADRLHNMRTLD 148
>gi|328951506|ref|YP_004368841.1| (p)ppGpp synthetase I SpoT/RelA [Marinithermus hydrothermalis DSM
14884]
gi|328451830|gb|AEB12731.1| (p)ppGpp synthetase I, SpoT/RelA [Marinithermus hydrothermalis DSM
14884]
Length = 735
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 75/142 (52%), Gaps = 12/142 (8%)
Query: 77 GMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIIS 136
G +P + +A +FA H Q RK G P+I HPVAVA IL L + +I+
Sbjct: 20 GYLTPQQRNRVQEALEFAFTAHDGQHRKS--GDPFITHPVAVAGILAELKMDED--TLIA 75
Query: 137 ALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTR------DERKRC--QILHAP 188
LLHDTVEDTD T + IE FGP VR +VE T + + DE+ Q+ A
Sbjct: 76 GLLHDTVEDTDVTLDAIEARFGPTVRRIVEGETKVSKLPKIAESIEDEQAENLRQMFIAM 135
Query: 189 HSSHEAKLVKLADKLHNLRDIE 210
+VKLAD+LHN+R +E
Sbjct: 136 TEDVRIIIVKLADRLHNMRTLE 157
>gi|428776221|ref|YP_007168008.1| (p)ppGpp synthetase I SpoT/RelA [Halothece sp. PCC 7418]
gi|428690500|gb|AFZ43794.1| (p)ppGpp synthetase I, SpoT/RelA [Halothece sp. PCC 7418]
Length = 765
Score = 83.6 bits (205), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 18/197 (9%)
Query: 74 SDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVV 133
+D + DA + I +A FA + H Q R+ G PYI HPVAVA ++ LG S +
Sbjct: 36 NDPSQDNQDAKL-IAEAFQFAYNLHEGQYRRS--GEPYIAHPVAVAGLIRDLGGGS--AM 90
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHA 187
I + LHD VEDTD T EEI+ +FG VR +VE +L+ K ++ ER+ ++ A
Sbjct: 91 IAAGFLHDIVEDTDITCEEIQEKFGEGVRHLVEGVTKLSKFKFSSKTERQAENFRRMFLA 150
Query: 188 PHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEA 245
+VKLAD+LHN+R +E P E++ Q R++ L R +
Sbjct: 151 MAKDIRVVVVKLADRLHNMRTLEHLKP-----EKQKQIALETREIFAPLANRLGIGRFKW 205
Query: 246 ELDALFAKYCTPREGRE 262
EL+ L KY P +E
Sbjct: 206 ELEDLSFKYLEPEAFQE 222
>gi|357392266|ref|YP_004907107.1| putative GTP pyrophosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Kitasatospora setae KM-6054]
gi|311898743|dbj|BAJ31151.1| putative GTP pyrophosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Kitasatospora setae KM-6054]
Length = 756
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 85/162 (52%), Gaps = 16/162 (9%)
Query: 78 MHSPDA-IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIIS 136
+H P A + + +A A H Q RK G PYI HP+AV IL LG ++ +++
Sbjct: 60 VHHPQADVPLLTRAYRLAEESHRGQTRK--SGEPYITHPLAVTMILAQLG--ADTTTLVA 115
Query: 137 ALLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSS 191
+LLHDTVEDT+ T E++ +FGP V +V+ +T D E R ++L A
Sbjct: 116 SLLHDTVEDTEVTLEQVAEDFGPEVAYLVDGVTKLEKVDFGAAAEPETFR-KMLVATGDD 174
Query: 192 HEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
++KLAD+LHN+R I P + + + N RDV+
Sbjct: 175 VRVMVIKLADRLHNMRTIRHMRPAS-----QVRIANVTRDVL 211
>gi|170748312|ref|YP_001754572.1| (p)ppGpp synthetase I SpoT/RelA [Methylobacterium radiotolerans JCM
2831]
gi|170654834|gb|ACB23889.1| (p)ppGpp synthetase I, SpoT/RelA [Methylobacterium radiotolerans
JCM 2831]
Length = 753
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 12/135 (8%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
+A++N +A +A H Q+R G P+ HP+ VA ILT L + I++A+LHD
Sbjct: 20 EALLN--RAYVYAMQAHGTQKR--ASGDPFFAHPLEVAAILTDLHL--DDATIVAAVLHD 73
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAK 195
TVEDT+ T EEI R FGP + ++V+ LT K + ++ Q +L A +
Sbjct: 74 TVEDTEATLEEIRRLFGPEIGALVDGLTKLKRLDLVSKQAAQGENFRKLLLAVAADVRVL 133
Query: 196 LVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 134 LVKLADRLHNMRTLQ 148
>gi|148243334|ref|YP_001228491.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. RCC307]
gi|147851644|emb|CAK29138.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. RCC307]
Length = 773
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/130 (43%), Positives = 70/130 (53%), Gaps = 12/130 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ A DFA H Q R G PYI HPVAVA +L +G ++ VI + LHD VEDT
Sbjct: 68 LASAFDFAYQLHRQQVRA--TGEPYIIHPVAVADLLRDIG--ASAAVIAAGFLHDVVEDT 123
Query: 147 DTTFEEIEREFGPRVRSVVEELTD-------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
D + EEIE FG VR +VE +T N+ + E R L A S LVKL
Sbjct: 124 DVSLEEIEGHFGAEVRQLVEGVTKLGGIHFTNRTEAQAENLRKMFL-AMASDIRVVLVKL 182
Query: 200 ADKLHNLRDI 209
AD+LHN+R +
Sbjct: 183 ADRLHNMRTL 192
>gi|332522744|ref|ZP_08398996.1| GTP diphosphokinase [Streptococcus porcinus str. Jelinkova 176]
gi|332314008|gb|EGJ26993.1| GTP diphosphokinase [Streptococcus porcinus str. Jelinkova 176]
Length = 739
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA D+A+ H++Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALDYATAAHYYQARK--SGEPYIIHPIQVAGILADLQ--LDAVTVACGFLHDVVEDTDI 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T + IE +FG VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDNIEMDFGSDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
AD+LHN+R ++
Sbjct: 143 ADRLHNMRTLK 153
>gi|393765241|ref|ZP_10353827.1| (p)ppGpp synthetase I SpoT/RelA [Methylobacterium sp. GXF4]
gi|392729328|gb|EIZ86607.1| (p)ppGpp synthetase I SpoT/RelA [Methylobacterium sp. GXF4]
Length = 764
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 12/135 (8%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
+A++N +A +A H Q+R G P+ HP+ VA ILT L + I++A+LHD
Sbjct: 36 EALLN--RAYVYAMQAHGTQKRA--SGDPFFAHPLEVAAILTDLHL--DDATIVAAVLHD 89
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAK 195
TVEDT+ T EEI R FGP + ++V+ LT K + ++ Q +L A +
Sbjct: 90 TVEDTEATLEEIRRLFGPEIGALVDGLTKLKRLDLVSKQAAQGENFRKLLLAVAADVRVL 149
Query: 196 LVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 150 LVKLADRLHNMRTLQ 164
>gi|359461025|ref|ZP_09249588.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris sp. CCMEE 5410]
Length = 732
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/186 (35%), Positives = 88/186 (47%), Gaps = 31/186 (16%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +F H QRR G PYI HPV+VA +L LG + +I + LHD VEDT
Sbjct: 19 ICRAFNFGYQLHEGQRR--ASGEPYIAHPVSVAELLRDLG--GSAAMIAAGFLHDVVEDT 74
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
D T E IE EFG VR +VE +L+ T+ ER+ ++ A +VKLA
Sbjct: 75 DVTPETIEAEFGLEVRQLVEGVTKLSKFNFSTKTEREAENFRRMFLAMAQDIRVIVVKLA 134
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPI---------EAELDALF 251
D+LHN+R +E P R + Q R AP+ + EL+ L
Sbjct: 135 DRLHNMRTLEHLPPAK------------QRRIAQETRDVFAPLANRLGIWRFKWELEDLA 182
Query: 252 AKYCTP 257
KY P
Sbjct: 183 FKYLEP 188
>gi|260434691|ref|ZP_05788661.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Synechococcus sp. WH 8109]
gi|260412565|gb|EEX05861.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Synechococcus sp. WH 8109]
Length = 777
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 75/140 (53%), Gaps = 11/140 (7%)
Query: 77 GMHSP-DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
G P DA +V A DF H Q R G PYI HPVAVA +L +G S PV I
Sbjct: 58 GQSCPTDAEALLVSAFDFGFQLHEGQFRAS--GDPYIVHPVAVADLLRDIG-ASAPV-IA 113
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
+ LHD VEDTD T ++IE FG VR +VE +T + ++R Q + A
Sbjct: 114 AGFLHDVVEDTDVTPDQIELHFGSEVRELVEGVTKLGGIHFNDRTEAQAENLRRMFLAMA 173
Query: 190 SSHEAKLVKLADKLHNLRDI 209
S+ LVKLAD+LHN+R +
Sbjct: 174 SNIRVVLVKLADRLHNMRTL 193
>gi|307155133|ref|YP_003890517.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7822]
gi|306985361|gb|ADN17242.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7822]
Length = 750
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 95/184 (51%), Gaps = 17/184 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +FA H Q RK G PYI HP+AVA +L LG + +I + LHD VEDT
Sbjct: 43 ICRAFNFAYELHKGQYRKS--GEPYIAHPIAVAGLLRDLG--GDSTMIAAGFLHDVVEDT 98
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
+ T E+IE+ FG VR +VE +L+ ++ ER+ ++ A +VKLA
Sbjct: 99 EVTLEDIEQRFGDEVRQLVEGVTKLSKFNFSSKTERQAENFRRMFLAMAKDIRVIVVKLA 158
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R +E TE++++ R++ L R + EL+ L KY P
Sbjct: 159 DRLHNMRTLEHLA----TEKQRSIALE-TREIFAPLANRLGIGRFKWELEDLCFKYLEPE 213
Query: 259 EGRE 262
RE
Sbjct: 214 AYRE 217
>gi|229817470|ref|ZP_04447752.1| hypothetical protein BIFANG_02733 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229785259|gb|EEP21373.1| hypothetical protein BIFANG_02733 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 774
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Query: 78 MHSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIIS 136
MH P M I+ +A A +H QRRK G PYI HP+AVA IL LG P V+ +
Sbjct: 35 MHHPGEDMTILERAYKRAVIQHSSQRRK--SGEPYIIHPLAVAQILADLGM--GPRVVAA 90
Query: 137 ALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSH 192
LLHDTVEDTD T +E EFG V +V+ +T M + + + + A
Sbjct: 91 GLLHDTVEDTDYTLDECRAEFGDTVTGLVDGVTKLSKMEYGDSAQAETIRKMVVAMSRDV 150
Query: 193 EAKLVKLADKLHNLR 207
+VKLAD++HN R
Sbjct: 151 RVLVVKLADRVHNAR 165
>gi|313891053|ref|ZP_07824672.1| GTP diphosphokinase [Streptococcus pseudoporcinus SPIN 20026]
gi|416852055|ref|ZP_11909200.1| RelA/SpoT family protein [Streptococcus pseudoporcinus LQ 940-04]
gi|313120416|gb|EFR43536.1| GTP diphosphokinase [Streptococcus pseudoporcinus SPIN 20026]
gi|356739544|gb|EHI64776.1| RelA/SpoT family protein [Streptococcus pseudoporcinus LQ 940-04]
Length = 739
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 72/133 (54%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA D+A+ H++Q RK G PYI HP+ VA IL L + V + LHD VEDT
Sbjct: 28 VKKALDYATAAHYYQARK--SGEPYIIHPIQVAGILADLQ--LDAVTVACGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLV 197
D T + IE +FG VR +V+ +T + + + RK +L A LV
Sbjct: 84 DITLDNIEMDFGSDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILV 140
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 141 KLADRLHNMRTLK 153
>gi|320334134|ref|YP_004170845.1| (p)ppGpp synthetase I SpoT/RelA [Deinococcus maricopensis DSM
21211]
gi|319755423|gb|ADV67180.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus maricopensis DSM
21211]
Length = 748
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 73/132 (55%), Gaps = 12/132 (9%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
I +A +FA H RK G PYI HPVAVA IL LG ++ I + LHDTVED
Sbjct: 18 KIERAYEFARDAHDGVLRK--SGEPYITHPVAVALILAELGMDTD--AICAGFLHDTVED 73
Query: 146 TDTTFEEIEREFGPRVRSVVE------ELTDNKHMTRDERKRC--QILHAPHSSHEAKLV 197
TD TF++IE FG VR +VE +LT +D++ Q+L A +V
Sbjct: 74 TDVTFQQIEDHFGRDVRRIVEGETKVSKLTKQTTSLQDQQSENLRQMLIAMTDDIRIIVV 133
Query: 198 KLADKLHNLRDI 209
KLAD+LHN+R +
Sbjct: 134 KLADRLHNMRTL 145
>gi|393779269|ref|ZP_10367514.1| RelA/SpoT family protein [Capnocytophaga sp. oral taxon 412 str.
F0487]
gi|392610543|gb|EIW93320.1| RelA/SpoT family protein [Capnocytophaga sp. oral taxon 412 str.
F0487]
Length = 736
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVEDTDT 148
A D A H QRRK G PYI HP+AVA I+ + +G + + I SALLHD VEDTD
Sbjct: 44 AFDTAVDAHKNQRRKS--GEPYIFHPIAVAKIVASQIG--LDAIAIASALLHDVVEDTDY 99
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T E++ER FG V +VE LT M+R+ Q +L + L+K+AD+
Sbjct: 100 TIEDMERLFGKTVAHIVEGLTKISSMSRENDISLQAENFRKLLLTMNDDVRVILIKIADR 159
Query: 203 LHNLRDIE 210
LHN++ ++
Sbjct: 160 LHNMQTMD 167
>gi|87300813|ref|ZP_01083655.1| metal dependent phosphohydrolase [Synechococcus sp. WH 5701]
gi|87284684|gb|EAQ76636.1| metal dependent phosphohydrolase [Synechococcus sp. WH 5701]
Length = 779
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 77/144 (53%), Gaps = 12/144 (8%)
Query: 72 GDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNP 131
G+ ++ P+A++ A DFA H Q R G PYI HPVAVA +L +G +
Sbjct: 58 GEGETCPTDPEALL--ASAFDFAFQLHDGQVRA--TGEPYIIHPVAVADLLRDIGASAG- 112
Query: 132 VVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELT--DNKHMTRDERKRCQILH--- 186
VI + LHD VEDTD T EE+E FG VR++VE +T H T + + L
Sbjct: 113 -VIAAGFLHDVVEDTDVTPEELEVHFGAEVRALVEGVTKLGGIHFTNHTEAQAENLRRMF 171
Query: 187 -APHSSHEAKLVKLADKLHNLRDI 209
A S LVKLAD+LHN+R +
Sbjct: 172 LAMASDIRVVLVKLADRLHNMRTL 195
>gi|383808192|ref|ZP_09963744.1| GTP diphosphokinase [Rothia aeria F0474]
gi|383449150|gb|EID52095.1| GTP diphosphokinase [Rothia aeria F0474]
Length = 802
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 73/133 (54%), Gaps = 8/133 (6%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
H + I + +A + A+ H Q+RK G PYI HPVAV IL +G + PV + + L
Sbjct: 76 HPEEDIQVLQRAFEVANRHHRGQKRKS--GDPYITHPVAVTAILAEMG-ATGPV-LAAGL 131
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAK--- 195
LHDTVEDTD T EE+ +FG V +V+ +T MT ER + + S
Sbjct: 132 LHDTVEDTDYTMEELTADFGEEVAYLVDGVTKLDRMTYGERASIETIRKLVLSMSKDIRV 191
Query: 196 -LVKLADKLHNLR 207
L+KLAD+LHN R
Sbjct: 192 LLIKLADRLHNAR 204
>gi|256818855|ref|YP_003140134.1| (p)ppGpp synthetase I SpoT/RelA [Capnocytophaga ochracea DSM 7271]
gi|256580438|gb|ACU91573.1| (p)ppGpp synthetase I, SpoT/RelA [Capnocytophaga ochracea DSM 7271]
Length = 732
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVEDTDT 148
A D A H QRRK G PYI HP+AVA I+ + +G + V I SALLHD VEDTD
Sbjct: 40 AFDTAVDAHKNQRRKS--GEPYIFHPIAVAKIVASQIG--LDAVAIASALLHDVVEDTDY 95
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T E++ER FG V +VE LT M+R+ Q +L + L+K+AD+
Sbjct: 96 TIEDMERLFGNTVAHIVEGLTKISSMSRENDISLQAENFRKLLLTMNDDVRVILIKIADR 155
Query: 203 LHNLRDIE 210
LHN++ ++
Sbjct: 156 LHNMQTMD 163
>gi|429745850|ref|ZP_19279235.1| putative GTP diphosphokinase [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429167723|gb|EKY09614.1| putative GTP diphosphokinase [Capnocytophaga sp. oral taxon 380
str. F0488]
Length = 732
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVEDTDT 148
A D A H QRRK G PYI HP+AVA I+ + +G + V I SALLHD VEDTD
Sbjct: 40 AFDTAVDAHKNQRRKS--GEPYIFHPIAVAKIVASQIG--LDAVAIASALLHDVVEDTDY 95
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T E++ER FG V +VE LT M+R+ Q +L + L+K+AD+
Sbjct: 96 TIEDMERLFGNTVAHIVEGLTKISSMSRENDISLQAENFRKLLLTMNDDVRVILIKIADR 155
Query: 203 LHNLRDIE 210
LHN++ ++
Sbjct: 156 LHNMQTMD 163
>gi|429752950|ref|ZP_19285781.1| putative GTP diphosphokinase [Capnocytophaga sp. oral taxon 326
str. F0382]
gi|429175417|gb|EKY16861.1| putative GTP diphosphokinase [Capnocytophaga sp. oral taxon 326
str. F0382]
Length = 732
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVEDTDT 148
A D A H QRRK G PYI HP+AVA I+ + +G + + I SALLHD VEDTD
Sbjct: 40 AFDTAVDAHKNQRRKS--GEPYIFHPIAVAKIVASQIG--LDAIAIASALLHDVVEDTDY 95
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T E++ER FG V +VE LT M+R+ Q +L + L+K+AD+
Sbjct: 96 TIEDMERLFGKTVAHIVEGLTKISSMSRENDISLQAENFRKLLLTMNDDVRVILIKIADR 155
Query: 203 LHNLRDIE 210
LHN++ ++
Sbjct: 156 LHNMQTMD 163
>gi|420150080|ref|ZP_14657242.1| RelA/SpoT family protein [Capnocytophaga sp. oral taxon 335 str.
F0486]
gi|394752618|gb|EJF36298.1| RelA/SpoT family protein [Capnocytophaga sp. oral taxon 335 str.
F0486]
Length = 732
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVEDTDT 148
A D A H QRRK G PYI HP+AVA I+ + +G + + I SALLHD VEDTD
Sbjct: 40 AFDTAVDAHKNQRRKS--GEPYIFHPIAVAKIVASQIG--LDAIAIASALLHDVVEDTDY 95
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T E++ER FG V +VE LT M+R+ Q +L + L+K+AD+
Sbjct: 96 TIEDMERLFGKTVAHIVEGLTKISSMSRENDISLQAENFRKLLLTMNDDVRVILIKIADR 155
Query: 203 LHNLRDIE 210
LHN++ ++
Sbjct: 156 LHNMQTMD 163
>gi|213962116|ref|ZP_03390380.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Capnocytophaga sputigena Capno]
gi|213955122|gb|EEB66440.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Capnocytophaga sputigena Capno]
Length = 732
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVEDTDT 148
A D A H QRRK G PYI HP+AVA I+ + +G + + I SALLHD VEDTD
Sbjct: 40 AFDTAVDAHKNQRRKS--GEPYIFHPIAVAKIVASQIG--LDAIAIASALLHDVVEDTDY 95
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T E++ER FG V +VE LT M+R+ Q +L + L+K+AD+
Sbjct: 96 TIEDMERLFGKTVAHIVEGLTKISSMSRENDISLQAENFRKLLLTMNDDVRVILIKIADR 155
Query: 203 LHNLRDIE 210
LHN++ ++
Sbjct: 156 LHNMQTMD 163
>gi|428212424|ref|YP_007085568.1| RelA/SpoT family (p)ppGpp synthetase [Oscillatoria acuminata PCC
6304]
gi|428000805|gb|AFY81648.1| (p)ppGpp synthetase, RelA/SpoT family [Oscillatoria acuminata PCC
6304]
Length = 754
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 74/130 (56%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +FA H QRRK G PYI HP+AVA +L LG S +I + LHD VEDT
Sbjct: 46 ICRAFEFAYQLHECQRRKS--GEPYIIHPIAVAGLLRELGGSS--AMIAAGFLHDVVEDT 101
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
+ T +EI+ FG VR +VE +L+ ++ ER+ ++ A +VKLA
Sbjct: 102 EVTPDEIQERFGEEVRQLVEGVTKLSKFNFSSKTERQAENFRRMFLAMAKDIRVIVVKLA 161
Query: 201 DKLHNLRDIE 210
D+LHN+R +E
Sbjct: 162 DRLHNMRTLE 171
>gi|238926103|ref|ZP_04657863.1| GTP diphosphokinase [Selenomonas flueggei ATCC 43531]
gi|238885993|gb|EEQ49631.1| GTP diphosphokinase [Selenomonas flueggei ATCC 43531]
Length = 739
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 101/196 (51%), Gaps = 34/196 (17%)
Query: 79 HSPDAIMN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ P+A +N IV+A +FA++ H Q R G PYI HP+ VA+ILT L + I +A
Sbjct: 20 YQPNADINKIVRAYEFAANAHRGQER--VSGEPYIVHPMHVAYILTTLH--LDDETICAA 75
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD-------NKHMTRDERKRCQILHAPHS 190
LHD VEDT TT EEIE FG V ++++ +T +K + E R L A
Sbjct: 76 FLHDVVEDTQTTLEEIEAVFGKNVMTLIDGVTKLGRIESMSKEDVKLENYRKMFL-AMAK 134
Query: 191 SHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQ---------GLRGTNA 241
++KLAD+LHN+R ++ + E K Q AR+ ++ G+ G
Sbjct: 135 DIRVIMIKLADRLHNMRTLK------YMREDKRQRI--ARETLEVYAPLANRLGISG--- 183
Query: 242 PIEAELDALFAKYCTP 257
I+AEL+ L +Y P
Sbjct: 184 -IKAELEDLCLRYLEP 198
>gi|78778579|ref|YP_396691.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9312]
gi|78712078|gb|ABB49255.1| metal dependent phosphohydrolase [Prochlorococcus marinus str. MIT
9312]
Length = 769
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 95/187 (50%), Gaps = 23/187 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+VKA A H Q R G PYI HPVAVA++L +G ++ VI + LLHD VEDT
Sbjct: 63 LVKAFKLAYKAHDGQFR--ASGEPYIIHPVAVANLLKEIG--ASTSVIAAGLLHDVVEDT 118
Query: 147 DTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
EIE FG V+ +VE +T +N+ + E R L A S LVKL
Sbjct: 119 GIDLSEIETNFGLEVKILVEGVTKLGGIHFNNRTEAQAENLRKMFL-AMASDIRVVLVKL 177
Query: 200 ADKLHNLRDIERSLPVNW-TEERKTQYFNWARDVVQGLR---GTNAPIEAELDALFAKYC 255
AD+LHN+R IE W +E+K + R++ L G N + EL+ L K+
Sbjct: 178 ADRLHNMRTIE------WLNDEKKLRIARETREIYAPLANRLGINR-FKWELEDLAFKFL 230
Query: 256 TPREGRE 262
P+E ++
Sbjct: 231 EPKEYKD 237
>gi|453382568|dbj|GAC82863.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia paraffinivorans NBRC
108238]
Length = 792
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 76/135 (56%), Gaps = 9/135 (6%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ + +A D A +H Q+RK G PYI HP+AVA IL LG + +++ALLHDTV
Sbjct: 82 VATLQRAYDVAEERHAGQKRKS--GDPYITHPLAVATILADLGM--DTTTLVAALLHDTV 137
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKL 199
EDT + EE+E++FGP V +V+ +T + + + A ++K+
Sbjct: 138 EDTGYSLEELEKDFGPEVAHLVDGVTKLDKVALGSAAEAETIRKMIIAMARDPRVLVIKV 197
Query: 200 ADKLHNLRDIERSLP 214
AD+LHN+R + R LP
Sbjct: 198 ADRLHNMRTM-RFLP 211
>gi|386583045|ref|YP_006079449.1| GTP pyrophosphokinase [Streptococcus suis SS12]
gi|389857607|ref|YP_006359850.1| GTP pyrophosphokinase [Streptococcus suis ST1]
gi|353735191|gb|AER16201.1| GTP pyrophosphokinase [Streptococcus suis SS12]
gi|353741325|gb|AER22332.1| GTP pyrophosphokinase [Streptococcus suis ST1]
Length = 733
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
++ + KA DFA+ H Q RK G PYI HP+ VA IL G + V + LHD V
Sbjct: 24 VIFVKKALDFATEAHKSQFRKS--GEPYIVHPIQVAGILA--GLKLDAVTVACGFLHDVV 79
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHEAKLV 197
EDTD T +++E EFGP VR +V +T H + +L A LV
Sbjct: 80 EDTDVTLDDMEAEFGPEVRHIVGGVTKLGKVEYKSHEEQLAENHRNMLIAMSQDMRVILV 139
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 140 KLADRLHNMRTLK 152
>gi|347529781|ref|YP_004836529.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Sphingobium sp. SYK-6]
gi|345138463|dbj|BAK68072.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Sphingobium sp. SYK-6]
Length = 697
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 79/138 (57%), Gaps = 11/138 (7%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ PDA ++ +A F+ KH Q+R G PY HP+ VA ILT L + I++A
Sbjct: 14 YDPDADEAMINRAYVFSVAKHGSQKR--ASGDPYFSHPIEVAGILTDL--FLDDRTIVTA 69
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD-NKHMTRDERKRC-----QILHAPHSS 191
LLHDT+EDT TT EEIE+ FGP V +V+ +T +K + E +R + L A
Sbjct: 70 LLHDTIEDTLTTTEEIEKLFGPDVARLVDGVTKLSKIEAQSENQRAAENLRKFLLAMSDD 129
Query: 192 HEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 130 IRVLLVKLADRLHNMRTL 147
>gi|386587178|ref|YP_006083580.1| GTP pyrophosphokinase [Streptococcus suis D12]
gi|353739324|gb|AER20332.1| GTP pyrophosphokinase [Streptococcus suis D12]
Length = 733
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
++ + KA DFA+ H Q RK G PYI HP+ VA IL G + V + LHD V
Sbjct: 24 VIFVKKALDFATEAHKSQFRKS--GEPYIVHPIQVAGILA--GLKLDAVTVACGFLHDVV 79
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHEAKLV 197
EDTD T +++E EFGP VR +V +T H + +L A LV
Sbjct: 80 EDTDVTLDDMEAEFGPEVRHIVGGVTKLGKVEYKSHEEQLAENHRNMLIAMSQDMRVILV 139
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 140 KLADRLHNMRTLK 152
>gi|294852016|ref|ZP_06792689.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Brucella
sp. NVSL 07-0026]
gi|294820605|gb|EFG37604.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Brucella
sp. NVSL 07-0026]
Length = 579
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 77/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + V
Sbjct: 24 YKPDVNEALLN--KAYVYAMQKHGSQKR--ASGDPYFSHPLEVAAILTDMHL----DEVT 75
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + VE LT K + +K Q +L A
Sbjct: 76 IAIALLHDTIEDTTATRQEIDQLFGPEIGKFVEGLTKLKKLDLVSKKAVQAENLRKLLLA 135
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 136 ISEDVRVLLVKLADRLHNMRTL 157
>gi|146321944|ref|YP_001201655.1| GTP pyrophosphokinase [Streptococcus suis 98HAH33]
gi|253752736|ref|YP_003025877.1| GTP pyrophosphokinase [Streptococcus suis SC84]
gi|253754562|ref|YP_003027703.1| GTP pyrophosphokinase [Streptococcus suis P1/7]
gi|253756495|ref|YP_003029635.1| GTP pyrophosphokinase [Streptococcus suis BM407]
gi|386578893|ref|YP_006075299.1| GTP pyrophosphokinase [Streptococcus suis GZ1]
gi|386580962|ref|YP_006077367.1| GTP pyrophosphokinase [Streptococcus suis JS14]
gi|386589167|ref|YP_006085568.1| GTP pyrophosphokinase [Streptococcus suis A7]
gi|403062501|ref|YP_006650717.1| GTP pyrophosphokinase [Streptococcus suis S735]
gi|145692750|gb|ABP93255.1| GTP pyrophosphokinase [Streptococcus suis 98HAH33]
gi|251817025|emb|CAZ52676.1| GTP pyrophosphokinase [Streptococcus suis SC84]
gi|251818959|emb|CAZ56804.1| GTP pyrophosphokinase [Streptococcus suis BM407]
gi|251820808|emb|CAR47572.1| GTP pyrophosphokinase [Streptococcus suis P1/7]
gi|292559356|gb|ADE32357.1| GTP pyrophosphokinase [Streptococcus suis GZ1]
gi|319759154|gb|ADV71096.1| GTP pyrophosphokinase [Streptococcus suis JS14]
gi|354986328|gb|AER45226.1| GTP pyrophosphokinase [Streptococcus suis A7]
gi|402809827|gb|AFR01319.1| GTP pyrophosphokinase [Streptococcus suis S735]
Length = 733
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
++ + KA DFA+ H Q RK G PYI HP+ VA IL G + V + LHD V
Sbjct: 24 VIFVKKALDFATEAHKSQFRKS--GEPYIVHPIQVAGILA--GLKLDAVTVACGFLHDVV 79
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHEAKLV 197
EDTD T +++E EFGP VR +V +T H + +L A LV
Sbjct: 80 EDTDVTLDDMEAEFGPEVRHIVGGVTKLGKVEYKSHEEQLAENHRNMLIAMSQDMRVILV 139
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 140 KLADRLHNMRTLK 152
>gi|146319748|ref|YP_001199460.1| GTP pyrophosphokinase [Streptococcus suis 05ZYH33]
gi|145690554|gb|ABP91060.1| GTP pyrophosphokinase [Streptococcus suis 05ZYH33]
Length = 733
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 70/133 (52%), Gaps = 10/133 (7%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
++ + KA DFA+ H Q RK G PYI HP+ VA IL G + V + LHD V
Sbjct: 24 VIFVKKALDFATEAHKSQFRKS--GEPYIVHPIQVAGILA--GLKLDAVTVACGFLHDVV 79
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHEAKLV 197
EDTD T +++E EFGP VR +V +T H + +L A LV
Sbjct: 80 EDTDVTLDDMEAEFGPEVRHIVGGVTKLGKVEYKSHEEQLAENHRNMLIAMSQDMRVILV 139
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 140 KLADRLHNMRTLK 152
>gi|254469589|ref|ZP_05082994.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase protein
[Pseudovibrio sp. JE062]
gi|211961424|gb|EEA96619.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase protein
[Pseudovibrio sp. JE062]
Length = 735
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 79/140 (56%), Gaps = 15/140 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
++PD A++N KA +A KH Q R G PYI HP+ VA ILT + K+ + + +
Sbjct: 14 YNPDTDEALLN--KAYVYAMQKHGTQTR--ASGDPYISHPLEVAAILTDM-KLDDATIAV 68
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDTD T EI+R FG + +VE LT + + RK Q +L A
Sbjct: 69 -ALLHDTIEDTDATRAEIDRMFGEEIGKLVEGLTKIQRLDLVSRKAKQAENFRKLLLAIA 127
Query: 190 SSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 128 DDVRVLLVKLADRLHNMRTL 147
>gi|407452621|ref|YP_006724346.1| hypothetical protein B739_1862 [Riemerella anatipestifer RA-CH-1]
gi|403313605|gb|AFR36446.1| hypothetical protein B739_1862 [Riemerella anatipestifer RA-CH-1]
Length = 735
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 14/136 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H QRRK G PYI HP+AVA I+ LG S I LLHD +
Sbjct: 35 IRKAFDIALDAHKDQRRK--TGEPYIYHPIAVAKIVAEEIGLGATS----IACTLLHDVI 88
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSHEAKLVK 198
ED+D T+E+I++ FG ++ S+V LT +N++++ ++L LVK
Sbjct: 89 EDSDYTYEDIKKIFGEKIASIVNGLTKISVMNNQNISIQSENYRKLLLTLSEDFRVILVK 148
Query: 199 LADKLHNLRDIERSLP 214
+AD+LHN+R ++ P
Sbjct: 149 IADRLHNMRTLDSMRP 164
>gi|206901091|ref|YP_002250691.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Dictyoglomus
thermophilum H-6-12]
gi|206740194|gb|ACI19252.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Dictyoglomus
thermophilum H-6-12]
Length = 727
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 73/131 (55%), Gaps = 10/131 (7%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
N+ KA FA + H Q RK G PYI HPV VA IL LG VII+ LLHD +ED
Sbjct: 23 NLKKAFIFAENAHKGQMRKS--GEPYITHPVEVAKILMDLG--MEETVIIAGLLHDVLED 78
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTR--DERKRCQILH----APHSSHEAKLVKL 199
T EEIE+EFG V S+VE +T + ++ E R Q L A ++KL
Sbjct: 79 TKVPKEEIEKEFGKDVLSLVEAITKLEKLSFYPTEAYRAQNLRKMFIAMAKDIRVIIIKL 138
Query: 200 ADKLHNLRDIE 210
AD+LHN++ ++
Sbjct: 139 ADRLHNMQTLQ 149
>gi|187778360|ref|ZP_02994833.1| hypothetical protein CLOSPO_01952 [Clostridium sporogenes ATCC
15579]
gi|187771985|gb|EDU35787.1| RelA/SpoT family protein [Clostridium sporogenes ATCC 15579]
Length = 723
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 98/188 (52%), Gaps = 17/188 (9%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S I I KA +FA + H Q+R G PYI HP VA IL +G N +I+ L+
Sbjct: 14 SEKEIEFIKKAYNFACNAHKEQKR--ISGEPYITHPEEVAIILFEMGMDVN--TMIAGLM 69
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHE 193
HD VEDT T+E++ +EFG V +V +L ++ T++E++ + L A
Sbjct: 70 HDVVEDTQYTYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQQADNVRKMLLAMTKDIR 129
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALF 251
L+KLAD+LHN+R + R +PV +E+ + D+ L R + I+ EL+ L
Sbjct: 130 VILIKLADRLHNMRTL-RFMPVEKQKEKAQETL----DIYAPLAHRLGISKIKWELEDLS 184
Query: 252 AKYCTPRE 259
+Y P E
Sbjct: 185 FRYINPNE 192
>gi|103488154|ref|YP_617715.1| (p)ppGpp synthetase I SpoT/RelA [Sphingopyxis alaskensis RB2256]
gi|98978231|gb|ABF54382.1| (p)ppGpp synthetase I, SpoT/RelA [Sphingopyxis alaskensis RB2256]
Length = 700
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 79/140 (56%), Gaps = 15/140 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PD A++N +A F KH Q+R G PY HPV VA ILT L S I+
Sbjct: 17 YDPDVDEALLN--RAYVFTVQKHGSQKR--ASGDPYFSHPVEVAGILTDLHLDSE--TIV 70
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD-NKHMTRDERKRC-----QILHAPH 189
+ALLHDT+EDT TT EEIER FGP V +V+ +T +K + E +R + L A
Sbjct: 71 TALLHDTLEDTLTTPEEIERLFGPDVGRLVDGVTKLSKIEAQTENERAAENLRKFLLAMS 130
Query: 190 SSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 131 DDIRVLLVKLADRLHNMRTL 150
>gi|414564881|ref|YP_006043842.1| GTP pyrophosphokinase RelA [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
gi|338847946|gb|AEJ26158.1| GTP pyrophosphokinase RelA [Streptococcus equi subsp. zooepidemicus
ATCC 35246]
Length = 739
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 72/133 (54%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA D+A+ H +Q RK G PYI HP+ VA IL L + V + LHD VEDT
Sbjct: 28 VQKALDYATAAHFYQVRKS--GEPYIVHPIQVAAILADLH--LDAVTVACGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLV 197
D T E+IE +FG VR +V+ +T + + + RK +L A LV
Sbjct: 84 DITLEDIEFDFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILV 140
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 141 KLADRLHNMRTLK 153
>gi|225867804|ref|YP_002743752.1| GTP pyrophosphokinase [Streptococcus equi subsp. zooepidemicus]
gi|225701080|emb|CAW97905.1| GTP pyrophosphokinase [Streptococcus equi subsp. zooepidemicus]
Length = 739
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 72/133 (54%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA D+A+ H +Q RK G PYI HP+ VA IL L + V + LHD VEDT
Sbjct: 28 VQKALDYATAAHFYQVRK--SGEPYIVHPIQVAAILADLH--LDAVTVACGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLV 197
D T E+IE +FG VR +V+ +T + + + RK +L A LV
Sbjct: 84 DITLEDIEFDFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILV 140
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 141 KLADRLHNMRTLK 153
>gi|374331947|ref|YP_005082131.1| bifunctional: (p)ppGpp synthetase II guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Pseudovibrio sp.
FO-BEG1]
gi|359344735|gb|AEV38109.1| bifunctional: (p)ppGpp synthetase II guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Pseudovibrio sp.
FO-BEG1]
Length = 744
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 79/140 (56%), Gaps = 15/140 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
++PD A++N KA +A KH Q R G PYI HP+ VA ILT + K+ + + +
Sbjct: 14 YNPDTDEALLN--KAYVYAMQKHGTQTR--ASGDPYISHPLEVAAILTDM-KLDDATIAV 68
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDTD T EI+R FG + +VE LT + + RK Q +L A
Sbjct: 69 -ALLHDTIEDTDATRAEIDRMFGEEIGKLVEGLTKIQRLDLVSRKAKQAENFRKLLLAIA 127
Query: 190 SSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 128 DDVRVLLVKLADRLHNMRTL 147
>gi|148381010|ref|YP_001255551.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 3502]
gi|153931540|ref|YP_001385381.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 19397]
gi|153936238|ref|YP_001388788.1| GTP pyrophosphokinase [Clostridium botulinum A str. Hall]
gi|226950488|ref|YP_002805579.1| GTP pyrophosphokinase [Clostridium botulinum A2 str. Kyoto]
gi|387819316|ref|YP_005679663.1| GTP pyrophosphokinase [Clostridium botulinum H04402 065]
gi|148290494|emb|CAL84622.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 3502]
gi|152927584|gb|ABS33084.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum A str.
ATCC 19397]
gi|152932152|gb|ABS37651.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum A str.
Hall]
gi|226842731|gb|ACO85397.1| GTP pyrophosphokinase [Clostridium botulinum A2 str. Kyoto]
gi|322807360|emb|CBZ04934.1| GTP pyrophosphokinase [Clostridium botulinum H04402 065]
Length = 723
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 96/181 (53%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA +FA + H Q+R G PYI HP VA IL +G N +I+ L+HD VEDT
Sbjct: 21 IKKAYNFACNAHKEQKR--ISGEPYITHPEEVAIILFEMGMDVN--TMIAGLMHDVVEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLA 200
T+E++ +EFG V +V +L ++ T++E++ + L A L+KLA
Sbjct: 77 QYTYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQQADNVRKMLLAMTKDIRVILIKLA 136
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R + R +PV +E+ + D+ L R + I+ EL+ L +Y P
Sbjct: 137 DRLHNMRTL-RFMPVEKQKEKAQETL----DIYAPLAHRLGISKIKWELEDLSFRYINPN 191
Query: 259 E 259
E
Sbjct: 192 E 192
>gi|153941234|ref|YP_001392337.1| GTP pyrophosphokinase [Clostridium botulinum F str. Langeland]
gi|170754462|ref|YP_001782694.1| GTP pyrophosphokinase [Clostridium botulinum B1 str. Okra]
gi|384463312|ref|YP_005675907.1| GTP pyrophosphokinase [Clostridium botulinum F str. 230613]
gi|429246540|ref|ZP_19209858.1| GTP pyrophosphokinase [Clostridium botulinum CFSAN001628]
gi|152937130|gb|ABS42628.1| GTP pyrophosphokinase [Clostridium botulinum F str. Langeland]
gi|169119674|gb|ACA43510.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum B1 str.
Okra]
gi|295320329|gb|ADG00707.1| GTP pyrophosphokinase [Clostridium botulinum F str. 230613]
gi|428756456|gb|EKX79010.1| GTP pyrophosphokinase [Clostridium botulinum CFSAN001628]
Length = 723
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 96/181 (53%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA +FA + H Q+R G PYI HP VA IL +G N +I+ L+HD VEDT
Sbjct: 21 IKKAYNFACNAHKEQKR--ISGEPYITHPEEVAIILFEMGMDVN--TMIAGLMHDVVEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLA 200
T+E++ +EFG V +V +L ++ T++E++ + L A L+KLA
Sbjct: 77 QYTYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQQADNVRKMLLAMTKDIRVILIKLA 136
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R + R +PV +E+ + D+ L R + I+ EL+ L +Y P
Sbjct: 137 DRLHNMRTL-RFMPVEKQKEKAQETL----DIYAPLAHRLGISKIKWELEDLAFRYINPN 191
Query: 259 E 259
E
Sbjct: 192 E 192
>gi|81300186|ref|YP_400394.1| metal dependent phosphohydrolase [Synechococcus elongatus PCC 7942]
gi|81169067|gb|ABB57407.1| metal dependent phosphohydrolase [Synechococcus elongatus PCC 7942]
Length = 779
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A FA H Q R G PYI HPVAVA +L LG + VI + LHD VEDT
Sbjct: 60 IARAFRFAYSLHEGQYRA--SGEPYIAHPVAVAGLLRDLG--GSAAVICAGFLHDVVEDT 115
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
+ T EEIE FG VR +VE +T + Q + A LVKLA
Sbjct: 116 EVTPEEIEERFGAEVRQLVEGVTKLSKFNFSSKTEQQAENFRRMFLAMAQDIRVILVKLA 175
Query: 201 DKLHNLRDIE 210
D+LHN+R +E
Sbjct: 176 DRLHNMRTLE 185
>gi|168179553|ref|ZP_02614217.1| GTP pyrophosphokinase [Clostridium botulinum NCTC 2916]
gi|182669850|gb|EDT81826.1| GTP pyrophosphokinase [Clostridium botulinum NCTC 2916]
Length = 723
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 96/181 (53%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA +FA + H Q+R G PYI HP VA IL +G N +I+ L+HD VEDT
Sbjct: 21 IKKAYNFACNAHKEQKR--ISGEPYITHPEEVAIILFEMGMDVN--TMIAGLMHDVVEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLA 200
T+E++ +EFG V +V +L ++ T++E++ + L A L+KLA
Sbjct: 77 QYTYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQQADNVRKMLLAMTKDIRVILIKLA 136
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R + R +PV +E+ + D+ L R + I+ EL+ L +Y P
Sbjct: 137 DRLHNMRTL-RFMPVEKQKEKAQETL----DIYAPLAHRLGISKIKWELEDLSFRYINPN 191
Query: 259 E 259
E
Sbjct: 192 E 192
>gi|78213963|ref|YP_382742.1| metal dependent phosphohydrolase [Synechococcus sp. CC9605]
gi|78198422|gb|ABB36187.1| metal dependent phosphohydrolase [Synechococcus sp. CC9605]
Length = 758
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 74/140 (52%), Gaps = 11/140 (7%)
Query: 77 GMHSP-DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
G P DA +V A DF H Q R G PYI HPVAVA +L +G S PV I
Sbjct: 39 GQSCPTDAEALLVSAFDFGFQLHEGQFRA--SGDPYIVHPVAVADLLRDIG-ASAPV-IA 94
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
+ LHD VEDTD T ++IE FG VR +VE +T + ++R Q + A
Sbjct: 95 AGFLHDVVEDTDVTPDQIELHFGSEVRELVEGVTKLGGIHFNDRTEAQAENLRRMFLAMA 154
Query: 190 SSHEAKLVKLADKLHNLRDI 209
S LVKLAD+LHN+R +
Sbjct: 155 SDIRVVLVKLADRLHNMRTL 174
>gi|170758445|ref|YP_001788379.1| GTP pyrophosphokinase [Clostridium botulinum A3 str. Loch Maree]
gi|169405434|gb|ACA53845.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum A3 str.
Loch Maree]
Length = 723
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 96/181 (53%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA +FA + H Q+R G PYI HP VA IL +G N +I+ L+HD VEDT
Sbjct: 21 IKKAYNFACNAHKEQKR--ISGEPYITHPEEVAIILFEMGMDVN--TMIAGLMHDVVEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLA 200
T+E++ +EFG V +V +L ++ T++E++ + L A L+KLA
Sbjct: 77 QYTYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQQADNVRKMLLAMTKDIRVILIKLA 136
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R + R +PV +E+ + D+ L R + I+ EL+ L +Y P
Sbjct: 137 DRLHNMRTL-RFMPVEKQKEKAQETL----DIYAPLAHRLGISKIKWELEDLSFRYINPN 191
Query: 259 E 259
E
Sbjct: 192 E 192
>gi|408500882|ref|YP_006864801.1| GTP diphosphokinase [Bifidobacterium asteroides PRL2011]
gi|408465706|gb|AFU71235.1| GTP diphosphokinase [Bifidobacterium asteroides PRL2011]
Length = 786
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++++ +A D A +H QRRK G PYI HP+AVA IL LG P V+ +
Sbjct: 48 HHPDEDLSMLQRAYDRAVVQHADQRRK--SGEPYIIHPLAVAQILADLGM--GPTVVSAG 103
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T M + + + + A
Sbjct: 104 LLHDTVEDTDYTLDQCRDEFGDTVAGLVDGVTKISKMDYGDSAQAETIRKMIVAMSRDVR 163
Query: 194 AKLVKLADKLHNLR 207
+VKLAD++HN R
Sbjct: 164 VLVVKLADRVHNAR 177
>gi|195978873|ref|YP_002124117.1| GTP pyrophosphokinase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975578|gb|ACG63104.1| GTP pyrophosphokinase RelA [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 739
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 72/133 (54%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA D+A+ H +Q RK G PYI HP+ VA IL L + V + LHD VEDT
Sbjct: 28 VQKALDYATAAHFYQIRKS--GEPYIVHPIQVAAILADLH--LDAVTVACGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLV 197
D T E+IE +FG VR +V+ +T + + + RK +L A LV
Sbjct: 84 DITLEDIEFDFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILV 140
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 141 KLADRLHNMRTLK 153
>gi|260563701|ref|ZP_05834187.1| GTP pyrophosphokinase [Brucella melitensis bv. 1 str. 16M]
gi|265990764|ref|ZP_06103321.1| GTP pyrophosphokinase [Brucella melitensis bv. 1 str. Rev.1]
gi|172045765|sp|Q8YG65.2|RSH_BRUME RecName: Full=GTP pyrophosphokinase rsh; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase
gi|260153717|gb|EEW88809.1| GTP pyrophosphokinase [Brucella melitensis bv. 1 str. 16M]
gi|263001548|gb|EEZ14123.1| GTP pyrophosphokinase [Brucella melitensis bv. 1 str. Rev.1]
Length = 750
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHRSQKRA--SGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 126 ISEDVRVLLVKLADRLHNMRTL 147
>gi|168181749|ref|ZP_02616413.1| GTP diphosphokinase [Clostridium botulinum Bf]
gi|237796515|ref|YP_002864067.1| GTP pyrophosphokinase [Clostridium botulinum Ba4 str. 657]
gi|182675126|gb|EDT87087.1| GTP diphosphokinase [Clostridium botulinum Bf]
gi|229261873|gb|ACQ52906.1| RelA/SpoT family protein [Clostridium botulinum Ba4 str. 657]
Length = 723
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 96/181 (53%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA +FA + H Q+R G PYI HP VA IL +G N +I+ L+HD VEDT
Sbjct: 21 IKKAYNFACNAHKEQKR--ISGEPYITHPEEVAIILFEMGMDVN--TMIAGLMHDVVEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLA 200
T+E++ +EFG V +V +L ++ T++E++ + L A L+KLA
Sbjct: 77 QYTYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQQADNVRKMLLAMTKDIRVILIKLA 136
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R + R +PV +E+ + D+ L R + I+ EL+ L +Y P
Sbjct: 137 DRLHNMRTL-RFMPVEKQKEKAQETL----DIYAPLAHRLGISKIKWELEDLSFRYINPN 191
Query: 259 E 259
E
Sbjct: 192 E 192
>gi|37522317|ref|NP_925694.1| (p)ppGpp 3'-pyrophosphohydrolase [Gloeobacter violaceus PCC 7421]
gi|35213317|dbj|BAC90689.1| (p)ppGpp 3'-pyrophosphohydrolase [Gloeobacter violaceus PCC 7421]
Length = 758
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 14/150 (9%)
Query: 71 TGDSDSGMHSPDAIMN----IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLG 126
T +S++ + +P + I +A DFA H Q R G PYI HPV VA +L LG
Sbjct: 40 TANSETSLTTPRTVSLDRGLIARAFDFAYRLHTGQNR--ASGEPYILHPVQVAGMLRELG 97
Query: 127 KVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ--- 183
S+ ++ + LHD +EDT TT E++E+ FG +VR +VE +T T D ++ Q
Sbjct: 98 --SDSAMVAAGFLHDIIEDTATTSEDLEQLFGEQVRLLVEGVTKLSKFTFDSKEERQAEN 155
Query: 184 ---ILHAPHSSHEAKLVKLADKLHNLRDIE 210
+ A +VKLAD+LHN+R ++
Sbjct: 156 FRRMFLAMAQDIRVIVVKLADRLHNMRTLD 185
>gi|337285951|ref|YP_004625424.1| (p)ppGpp synthetase I SpoT/RelA [Thermodesulfatator indicus DSM
15286]
gi|335358779|gb|AEH44460.1| (p)ppGpp synthetase I, SpoT/RelA [Thermodesulfatator indicus DSM
15286]
Length = 727
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA FA+ H Q R+ G PY+ HP++VA+IL + K+ P I + LLHDTVEDTD
Sbjct: 30 KAYVFAAKAHAGQVRRS--GEPYLAHPLSVAYILARM-KLDLPT-IAAGLLHDTVEDTDV 85
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T E+I++ FGP V +V+ +T H++ + Q +L A LVKLAD+
Sbjct: 86 TIEDIKKHFGPVVAEIVDGVTKIAHLSARSKVHKQAENFRKMLLAMAEDLRVILVKLADR 145
Query: 203 LHNLRDIE 210
LHN++ +E
Sbjct: 146 LHNMKTLE 153
>gi|378581746|ref|ZP_09830390.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Pantoea
stewartii subsp. stewartii DC283]
gi|377815660|gb|EHT98771.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Pantoea
stewartii subsp. stewartii DC283]
Length = 197
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 96 HKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIER 155
H QRRK + PYI HP AV ++ + +PV++ +A LHDTVEDT TT +IE
Sbjct: 17 HAESGQRRKYTD-EPYIVHPTAVVELVRSV--TDDPVMLAAAWLHDTVEDTATTLNDIEN 73
Query: 156 EFGPRVRSVVEELTD---NKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIERS 212
FGP V +VE LTD + R RK H +S EA+ +KLAD + N R I R
Sbjct: 74 HFGPEVARLVEMLTDTAPTQAKNRAARKMAHFRHTAQASPEAQTIKLADIIDNTRAIVRF 133
Query: 213 LP 214
P
Sbjct: 134 DP 135
>gi|424826931|ref|ZP_18251766.1| GTP pyrophosphokinase [Clostridium sporogenes PA 3679]
gi|365980468|gb|EHN16498.1| GTP pyrophosphokinase [Clostridium sporogenes PA 3679]
Length = 723
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 96/181 (53%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA +FA + H Q+R G PYI HP VA IL +G N +I+ L+HD VEDT
Sbjct: 21 IKKAYNFACNAHKEQKR--ISGEPYITHPEEVAIILFEMGMDVN--TMIAGLMHDVVEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLA 200
T+E++ +EFG V +V +L ++ T++E++ + L A L+KLA
Sbjct: 77 QYTYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQQADNVRKMLLAMTKDIRVILIKLA 136
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R + R +PV +E+ + D+ L R + I+ EL+ L +Y P
Sbjct: 137 DRLHNMRTL-RFMPVEKQKEKAQETL----DIYAPLAHRLGISKIKWELEDLSFRYINPN 191
Query: 259 E 259
E
Sbjct: 192 E 192
>gi|56750188|ref|YP_170889.1| GTP pyrophosphokinase [Synechococcus elongatus PCC 6301]
gi|56685147|dbj|BAD78369.1| GTP pyrophosphokinase [Synechococcus elongatus PCC 6301]
Length = 764
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A FA H Q R G PYI HPVAVA +L LG + VI + LHD VEDT
Sbjct: 45 IARAFRFAYSLHEGQYR--ASGEPYIAHPVAVAGLLRDLG--GSAAVICAGFLHDVVEDT 100
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
+ T EEIE FG VR +VE +T + Q + A LVKLA
Sbjct: 101 EVTPEEIEERFGAEVRQLVEGVTKLSKFNFSSKTEQQAENFRRMFLAMAQDIRVILVKLA 160
Query: 201 DKLHNLRDIE 210
D+LHN+R +E
Sbjct: 161 DRLHNMRTLE 170
>gi|365883079|ref|ZP_09422259.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS 375]
gi|365288511|emb|CCD94790.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS 375]
Length = 765
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 80/139 (57%), Gaps = 11/139 (7%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++PD +++ +A +A H Q R G PY HP+ VA ILT L K+ + I++A
Sbjct: 51 YNPDTNEDLLNRAYVYAMKAHGSQTRA--SGDPYFTHPLEVAAILTDL-KLDD-ATIVAA 106
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
LLHDT+EDT+ T EI+R FGP + ++VE LT K + R+ Q +L A
Sbjct: 107 LLHDTIEDTEATRAEIDRFFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADD 166
Query: 192 HEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 167 VRVLLVKLADRLHNMRTLE 185
>gi|384440422|ref|YP_005655146.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (PpGpp
synthase) [Thermus sp. CCB_US3_UF1]
gi|359291555|gb|AEV17072.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (PpGpp
synthase) [Thermus sp. CCB_US3_UF1]
Length = 726
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 70/140 (50%), Gaps = 13/140 (9%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP + A FA H Q RK G PYI HPVAVA IL L + V + LL
Sbjct: 19 SPAEREGVKAAYLFAEEAHRGQLRKS--GEPYITHPVAVAEILASLRMDAETVA--AGLL 74
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTR-----DERKRC----QILHAPHS 190
HDTVED EE+ER FGP VR +VE T + + E KR Q+ A
Sbjct: 75 HDTVEDCGVAPEELERRFGPGVRRIVEGETKVSKLYKLANLEGEEKRAEDLRQMFIAMAE 134
Query: 191 SHEAKLVKLADKLHNLRDIE 210
+VKLAD+LHNLR +E
Sbjct: 135 DVRIIIVKLADRLHNLRTLE 154
>gi|304436591|ref|ZP_07396560.1| GTP diphosphokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370287|gb|EFM23943.1| GTP diphosphokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 739
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 34/196 (17%)
Query: 79 HSPDAIMN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ P+A +N I++A +FA++ H Q R G PYI HP+ VA+ILT L + I +A
Sbjct: 20 YQPNADINKIIRAYEFAANAHRGQER--VSGEPYIVHPMHVAYILTTLH--LDDETICAA 75
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD-------NKHMTRDERKRCQILHAPHS 190
LHD VEDT TT EEIE FG V ++++ +T +K + E R L A
Sbjct: 76 FLHDVVEDTQTTLEEIEAVFGKNVMTLIDGVTKLGRIESMSKEDVKLENYRKMFL-AMAK 134
Query: 191 SHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQ---------GLRGTNA 241
++KLAD+LHN+R ++ + E K Q AR+ ++ G+ G
Sbjct: 135 DIRVIMIKLADRLHNMRTLK------YMREDKRQRI--ARETLEVYAPLANRLGISG--- 183
Query: 242 PIEAELDALFAKYCTP 257
I+AEL+ L +Y P
Sbjct: 184 -IKAELEDLCLRYLEP 198
>gi|456354826|dbj|BAM89271.1| GTP pyrophosphokinase [Agromonas oligotrophica S58]
Length = 767
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 80/139 (57%), Gaps = 11/139 (7%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++PD +++ +A +A H Q R G PY HP+ VA ILT L K+ + I++A
Sbjct: 51 YNPDTNEDLLNRAYVYAMKAHGSQTRA--SGDPYFTHPLEVAAILTDL-KLDD-ATIVAA 106
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
LLHDT+EDT+ T EI+R FGP + ++VE LT K + R+ Q +L A
Sbjct: 107 LLHDTIEDTEATRAEIDRFFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADD 166
Query: 192 HEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 167 VRVLLVKLADRLHNMRTLE 185
>gi|294790957|ref|ZP_06756115.1| GTP diphosphokinase [Scardovia inopinata F0304]
gi|294458854|gb|EFG27207.1| GTP diphosphokinase [Scardovia inopinata F0304]
Length = 773
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 98/185 (52%), Gaps = 12/185 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P A ++I+ KA D A +H Q+R+ G PYI HP+AVA IL LG +P V+ +
Sbjct: 27 HYPRADLSIIRKAYDRAVAQHTHQQRR--SGEPYIIHPIAVAQILADLGM--SPKVVAAG 82
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD + ++ +EFG V +V+ +T M + + + + A
Sbjct: 83 LLHDTVEDTDYSLDQCRQEFGDTVAGLVDGVTKLTKMDVGDSAQAETIRKMVVAMSKDVR 142
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
+VKLAD++HN R R + V +++ + + + L G NA I+ EL+ L K
Sbjct: 143 VLVVKLADRVHNAR-TWRYVKVTNAQKKARETLDVYAPLANRL-GMNA-IKTELEELSFK 199
Query: 254 YCTPR 258
P+
Sbjct: 200 ALHPK 204
>gi|425459584|ref|ZP_18839070.1| hypothetical protein MICAG_950016 [Microcystis aeruginosa PCC 9808]
gi|389822624|emb|CCI29699.1| hypothetical protein MICAG_950016 [Microcystis aeruginosa PCC 9808]
Length = 559
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 63 ARLGEAPDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL 122
A L E SDSG + I +A +FA H Q K G PYI HP+AVA +L
Sbjct: 224 AWLQECLSAYQSDSGQDKSEDNDLICRAFNFAYQLHRGQYCKS--GKPYITHPIAVAGLL 281
Query: 123 THLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER 179
LG S +I + LHD VEDT+ T EEIE FG VR++VE +L+ ++ ER
Sbjct: 282 RDLGGSST--IIAAGFLHDVVEDTEVTPEEIEARFGFEVRNLVEAVTKLSKYNFSSKTER 339
Query: 180 KR---CQILHAPHSSHEAKLVKLADKLHNLRDIE 210
+ ++ A +VKLA++LHN++ +E
Sbjct: 340 QAENFRRMFLAMAQDIRVIVVKLAERLHNMQTLE 373
>gi|148256036|ref|YP_001240621.1| GTP pyrophosphokinase [Bradyrhizobium sp. BTAi1]
gi|146408209|gb|ABQ36715.1| GTP pyrophosphokinase [Bradyrhizobium sp. BTAi1]
Length = 729
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 80/139 (57%), Gaps = 11/139 (7%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++PD +++ +A +A H Q R G PY HP+ VA ILT L K+ + I++A
Sbjct: 14 YNPDTNEDLLNRAYVYAMKAHGSQTR--ASGDPYFTHPLEVAAILTDL-KLDD-ATIVAA 69
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
LLHDT+EDT+ T EI+R FGP + ++VE LT K + R+ Q +L A
Sbjct: 70 LLHDTIEDTEATRAEIDRLFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADD 129
Query: 192 HEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 130 VRVLLVKLADRLHNMRTLE 148
>gi|319404013|emb|CBI77601.1| GTP pyrophosphokinase [Bartonella rochalimae ATCC BAA-1498]
Length = 742
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 78/151 (51%), Gaps = 13/151 (8%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ PD +++ KA +A KH QRR G Y HP+ VA ILT + + I A
Sbjct: 14 YKPDVNADLLNKAYVYAMQKHGHQRR--ASGDLYFSHPLEVASILTDM--YLDEATIAVA 69
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
LLHDT+EDT+ T EEI++ FGP + +VE LT + +K Q +L A
Sbjct: 70 LLHDTIEDTNATREEIDQLFGPEIGKLVEGLTKLNKLDLVSKKAVQAENLRKLLIAISDD 129
Query: 192 HEAKLVKLADKLHNLR--DIERSLPVNWTEE 220
LVKLAD+LHN+R D+ R W E
Sbjct: 130 IRVLLVKLADRLHNMRTLDVMRDDKRRWIAE 160
>gi|313675243|ref|YP_004053239.1| (p)ppGpp synthetase I SpoT/RelA [Marivirga tractuosa DSM 4126]
gi|312941941|gb|ADR21131.1| (p)ppGpp synthetase I, SpoT/RelA [Marivirga tractuosa DSM 4126]
Length = 736
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 75/138 (54%), Gaps = 15/138 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA + H RRK G PYI HP+AVA I LG S IISALLHD V
Sbjct: 36 IKKAFTTSMEAHKEMRRKS--GEPYILHPIAVATICVEEIGLGTTS----IISALLHDVV 89
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHM-----TRDERKRCQILHAPHSSHEAKLVK 198
EDTD E+IEREFGP+V +++ LT + ++ ++L L+K
Sbjct: 90 EDTDWELEDIEREFGPKVAPIIDGLTKISGVFEYGTSQQAENFRKMLLTLSKDVRVILIK 149
Query: 199 LADKLHNLRDIERSLPVN 216
LAD+LHN+R +E S+P N
Sbjct: 150 LADRLHNMRTLE-SMPRN 166
>gi|311064614|ref|YP_003971339.1| GTP pyrophosphokinase [Bifidobacterium bifidum PRL2010]
gi|310866933|gb|ADP36302.1| RelA GTP pyrophosphokinase/Guanosine-3',5'-bis(Diphosphate),
3'-pyrophosphohydrolase [Bifidobacterium bifidum
PRL2010]
Length = 776
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDEDLSILERAYRRAVIQHSSQRRK--SGEPYIIHPLAVAQILADLGM--GPLVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T +E EFG V +V+ +T M + + + + A
Sbjct: 92 LLHDTVEDTDYTLDECRAEFGDTVTGLVDGVTKLSKMEYGDSAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKL+D++HN R
Sbjct: 152 VLVVKLSDRVHNAR 165
>gi|390937140|ref|YP_006394699.1| GTP pyrophosphokinase [Bifidobacterium bifidum BGN4]
gi|421734348|ref|ZP_16173422.1| GTP pyrophosphokinase [Bifidobacterium bifidum LMG 13195]
gi|421737810|ref|ZP_16176291.1| GTP pyrophosphokinase [Bifidobacterium bifidum IPLA 20015]
gi|389890753|gb|AFL04820.1| GTP pyrophosphokinase [Bifidobacterium bifidum BGN4]
gi|407077729|gb|EKE50561.1| GTP pyrophosphokinase [Bifidobacterium bifidum LMG 13195]
gi|407294900|gb|EKF14801.1| GTP pyrophosphokinase [Bifidobacterium bifidum IPLA 20015]
Length = 776
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDEDLSILERAYRRAVIQHSSQRRK--SGEPYIIHPLAVAQILADLGM--GPLVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T +E EFG V +V+ +T M + + + + A
Sbjct: 92 LLHDTVEDTDYTLDECRAEFGDTVTGLVDGVTKLSKMEYGDSAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKL+D++HN R
Sbjct: 152 VLVVKLSDRVHNAR 165
>gi|17987579|ref|NP_540213.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Brucella
melitensis bv. 1 str. 16M]
gi|17983284|gb|AAL52477.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Brucella
melitensis bv. 1 str. 16M]
Length = 760
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 24 YKPDVNEALLN--KAYVYAMQKHRSQKRA--SGDPYFSHPLEVAAILTDMHLDEAT---- 75
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 76 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 135
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 136 ISEDVRVLLVKLADRLHNMRTL 157
>gi|336178452|ref|YP_004583827.1| (p)ppGpp synthetase I SpoT/RelA [Frankia symbiont of Datisca
glomerata]
gi|334859432|gb|AEH09906.1| (p)ppGpp synthetase I, SpoT/RelA [Frankia symbiont of Datisca
glomerata]
Length = 834
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 9/136 (6%)
Query: 79 HSPDA-IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P A + IV+A + A+ +H Q R G PYI HP+AV IL LG + +++A
Sbjct: 80 HHPKADVALIVRAYEVANRQHAGQMRH--SGDPYITHPLAVTDILAELG--VDTTTVVAA 135
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDT T E + +FGP V ++V+ +T M + + L A +
Sbjct: 136 LLHDTVEDTGYTLEAVTADFGPEVANLVDGVTKLDKMRFGDAAEAETLRKLIVALARDYR 195
Query: 194 AKLVKLADKLHNLRDI 209
L+K+AD+LHN+R +
Sbjct: 196 VLLIKIADRLHNMRTL 211
>gi|310287726|ref|YP_003938984.1| GTP pyrophosphokinase [Bifidobacterium bifidum S17]
gi|309251662|gb|ADO53410.1| GTP pyrophosphokinase [Bifidobacterium bifidum S17]
Length = 776
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDEDLSILERAYRRAVIQHSSQRRK--SGEPYIIHPLAVAQILADLGM--GPLVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T +E EFG V +V+ +T M + + + + A
Sbjct: 92 LLHDTVEDTDYTLDECRAEFGDTVTGLVDGVTKLSKMEYGDSAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKL+D++HN R
Sbjct: 152 VLVVKLSDRVHNAR 165
>gi|317968168|ref|ZP_07969558.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. CB0205]
Length = 786
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 70/130 (53%), Gaps = 12/130 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ A DFA H Q R G PYI HPVAVA +L +G + VI + LHD VEDT
Sbjct: 72 LASAFDFAFQLHDGQVRAS--GEPYICHPVAVADLLRDIGASAG--VIAAGFLHDVVEDT 127
Query: 147 DTTFEEIEREFGPRVRSVVEELTD-------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
+ T EEIE+ FG VR +VE +T NK + E R L A S LVKL
Sbjct: 128 EVTPEEIEQHFGSEVRGLVEGVTKLGGIHFTNKTEAQAENLRRMFL-AMVSDIRVVLVKL 186
Query: 200 ADKLHNLRDI 209
AD+LHN+R +
Sbjct: 187 ADRLHNMRTL 196
>gi|157412548|ref|YP_001483414.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9215]
gi|157387123|gb|ABV49828.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9215]
Length = 769
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA A H Q R G PYI HPVAVA++L +G S+ VI + LLHD VEDT
Sbjct: 63 IAKAFKLAYKAHDGQFR--ASGEPYIIHPVAVANLLKEIGASSS--VIAAGLLHDVVEDT 118
Query: 147 DTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
EIE FG V+ +VE +T +N+ + E R L A S LVKL
Sbjct: 119 GIDLYEIETNFGLEVKILVEGVTKLGGIHFNNRTEAQAENLRKMFL-AMASDIRVVLVKL 177
Query: 200 ADKLHNLRDIERSLPVNW-TEERKTQYFNWARDVVQGLR---GTNAPIEAELDALFAKYC 255
AD+LHN+R IE W +E+K + R++ L G N + EL+ L K+
Sbjct: 178 ADRLHNMRTIE------WLNDEKKLRIARETREIYAPLANRLGINR-FKWELEDLAFKFL 230
Query: 256 TPRE 259
P+E
Sbjct: 231 EPKE 234
>gi|317508687|ref|ZP_07966342.1| RelA/SpoT family protein [Segniliparus rugosus ATCC BAA-974]
gi|316253008|gb|EFV12423.1| RelA/SpoT family protein [Segniliparus rugosus ATCC BAA-974]
Length = 797
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 80/139 (57%), Gaps = 10/139 (7%)
Query: 81 PDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
P A + ++ KA + A +H Q R+ G PYI HP+AVAHIL LG + + +++ALL
Sbjct: 86 PKASLGLLAKAYEIAEVRHKGQFRRS--GDPYITHPLAVAHILAELGM--DTLSLVAALL 141
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAK 195
HDTVEDT + EE+ER+FG V +V+ +T +T + + A
Sbjct: 142 HDTVEDTGYSLEELERDFGSDVAHIVDGVTKLDKVTWGAGAEAETIRKMVIAMARDPRVL 201
Query: 196 LVKLADKLHNLRDIERSLP 214
++K+AD+LHN+R + R +P
Sbjct: 202 VIKVADRLHNMRTM-RFMP 219
>gi|282899912|ref|ZP_06307873.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Cylindrospermopsis raciborskii CS-505]
gi|281195182|gb|EFA70118.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Cylindrospermopsis raciborskii CS-505]
Length = 756
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 97/202 (48%), Gaps = 23/202 (11%)
Query: 74 SDSGMHSPDAIMN----IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVS 129
S+SG D N I A FA H Q RK G PYI HP+AVA +L LG
Sbjct: 26 SNSGSGEDDRRRNDNNLICSALKFAYELHEGQYRKS--GEPYIAHPIAVADLLRDLG--C 81
Query: 130 NPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD-------NKHMTRDERKRC 182
+ +I + LHD VEDT+ T E+IE++FG VR +VE +T +K ++ E R
Sbjct: 82 SATMIAAGFLHDVVEDTEVTIEDIEQKFGHEVRQLVEGVTKLSKINFTSKTESQAENFRR 141
Query: 183 QILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTN 240
L +VKLAD+LHN+R ++ +E + + RD+ L R
Sbjct: 142 MFLSMAQDI-RVIVVKLADRLHNMRTLQYM-----SETSRRRSAQETRDIFAPLANRLGI 195
Query: 241 APIEAELDALFAKYCTPREGRE 262
I+ EL+ L KY P RE
Sbjct: 196 WHIKWELEDLAFKYLEPDAYRE 217
>gi|299144024|ref|ZP_07037104.1| GTP diphosphokinase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518509|gb|EFI42248.1| GTP diphosphokinase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 713
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A + AS H Q+R G PYI HP VA IL + + II+ LLHDT+EDT
Sbjct: 21 IEEAFNLASEHHKKQKRN--SGEPYIVHPFNVALILADMN--MDTATIIAGLLHDTIEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
D T+E+I++EFG + +VE +T K + ++ Q ++ A +VKLA
Sbjct: 77 DVTYEDIKKEFGVEIADLVEGVTKLKKLNYQTKQEKQAENIRKMVLAMARDIRVIIVKLA 136
Query: 201 DKLHNLRDIE 210
D+LHN+R +E
Sbjct: 137 DRLHNMRTLE 146
>gi|313140527|ref|ZP_07802720.1| RelA [Bifidobacterium bifidum NCIMB 41171]
gi|313133037|gb|EFR50654.1| RelA [Bifidobacterium bifidum NCIMB 41171]
Length = 776
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A A +H QRRK G PYI HP+AVA IL LG P+V+ +
Sbjct: 36 HHPDEDLSILERAYRRAVIQHSSQRRK--SGEPYIIHPLAVAQILADLGM--GPLVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T +E EFG V +V+ +T M + + + + A
Sbjct: 92 LLHDTVEDTDYTLDECRAEFGDTVTGLVDGVTKLSKMEYGDSAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKL+D++HN R
Sbjct: 152 VLVVKLSDRVHNAR 165
>gi|375254511|ref|YP_005013678.1| putative guanosine 3',5'-bis(pyrophosphate) 3'-pyrophosphohydrolase
[Tannerella forsythia ATCC 43037]
gi|363408616|gb|AEW22302.1| putative guanosine 3',5'-bis(pyrophosphate) 3'-pyrophosphohydrolase
[Tannerella forsythia ATCC 43037]
Length = 751
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLH 140
I I KA +FA H RR+ G PYI HP+AVA I+ + LG S I SALLH
Sbjct: 35 IERITKAFNFAHQAHKGVRRR--SGEPYIMHPLAVARIVCNEMGLGSTS----ICSALLH 88
Query: 141 DTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEA 194
D VEDT+ T E+I F ++ +V+ LT + DE+ Q +L S
Sbjct: 89 DVVEDTEYTVEDIRNMFDDKIAQIVDGLTKISGVIFDEQASAQAENFRKLLLTMSSDIRV 148
Query: 195 KLVKLADKLHNLRDIERSLP 214
L+K+AD+LHN+R + LP
Sbjct: 149 ILIKMADRLHNMRTLSSMLP 168
>gi|254466342|ref|ZP_05079753.1| RelA/SpoT family protein [Rhodobacterales bacterium Y4I]
gi|206687250|gb|EDZ47732.1| RelA/SpoT family protein [Rhodobacterales bacterium Y4I]
Length = 711
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 91/185 (49%), Gaps = 18/185 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A F H Q R G PY HPVAVA ILT + + II+ALLHDT+EDT
Sbjct: 23 IAEAYAFGEQMHEGQFRHS--GEPYFTHPVAVAAILTE--QRLDDATIITALLHDTIEDT 78
Query: 147 DTTFEEIEREFGPRVRSVVEELTD--NKHMTRDERKRCQ----ILHAPHSSHEAKLVKLA 200
+EE+ R FG V +V+ +T N ++ E K+ + + A LVKLA
Sbjct: 79 KANYEEVARRFGGEVAMLVDGVTKLTNLQLSSRETKQAENFRKLFMAMSKDLRVILVKLA 138
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAP--IEAELDALFAKYCTPR 258
D+LHN+R I+ P E++ Q D+ L G + EL+ L + P
Sbjct: 139 DRLHNMRTIKAMRP-----EKQAQKARETMDIYAPLAGRMGMQWMREELEDLAFRVLNP- 192
Query: 259 EGREN 263
EGR++
Sbjct: 193 EGRQS 197
>gi|265983775|ref|ZP_06096510.1| GTP pyrophosphokinase [Brucella sp. 83/13]
gi|306837514|ref|ZP_07470389.1| RelA/SpoT family protein [Brucella sp. NF 2653]
gi|264662367|gb|EEZ32628.1| GTP pyrophosphokinase [Brucella sp. 83/13]
gi|306407406|gb|EFM63610.1| RelA/SpoT family protein [Brucella sp. NF 2653]
Length = 750
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGSQKRA--SGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 126 ISEDVRVLLVKLADRLHNMRTL 147
>gi|87200546|ref|YP_497803.1| (p)ppGpp synthetase SpoT/RelA [Novosphingobium aromaticivorans DSM
12444]
gi|87136227|gb|ABD26969.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Novosphingobium aromaticivorans DSM 12444]
Length = 695
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 79/140 (56%), Gaps = 15/140 (10%)
Query: 79 HSPDA---IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PDA ++N +A + KH Q+R G PY HPV VA ++T L + II
Sbjct: 14 YDPDADEAMLN--RAYVYTVQKHGTQKR--ASGDPYFSHPVEVAGLMTELKLDQD--TII 67
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD-NKHMTRDERKRC-----QILHAPH 189
+ALLHDTVEDT TT E+IER FGP V +V+ +T +K T E +R + L A
Sbjct: 68 TALLHDTVEDTLTTVEDIERLFGPDVARLVDGVTKLSKIETMSESERAAENLRKFLLAMS 127
Query: 190 SSHEAKLVKLADKLHNLRDI 209
LVKLAD++HN+R +
Sbjct: 128 EDLRVLLVKLADRMHNMRTL 147
>gi|148559492|ref|YP_001258636.1| GTP pyrophosphokinase [Brucella ovis ATCC 25840]
gi|256369090|ref|YP_003106598.1| RelA/SpoT family protein [Brucella microti CCM 4915]
gi|261218978|ref|ZP_05933259.1| GTP pyrophosphokinase [Brucella ceti M13/05/1]
gi|261221854|ref|ZP_05936135.1| GTP pyrophosphokinase [Brucella ceti B1/94]
gi|261315132|ref|ZP_05954329.1| GTP pyrophosphokinase [Brucella pinnipedialis M163/99/10]
gi|261317312|ref|ZP_05956509.1| GTP pyrophosphokinase [Brucella pinnipedialis B2/94]
gi|261321523|ref|ZP_05960720.1| GTP pyrophosphokinase [Brucella ceti M644/93/1]
gi|261324771|ref|ZP_05963968.1| GTP pyrophosphokinase [Brucella neotomae 5K33]
gi|261751980|ref|ZP_05995689.1| GTP pyrophosphokinase [Brucella suis bv. 5 str. 513]
gi|261757867|ref|ZP_06001576.1| GTP pyrophosphokinase rsh [Brucella sp. F5/99]
gi|265988351|ref|ZP_06100908.1| GTP pyrophosphokinase [Brucella pinnipedialis M292/94/1]
gi|265997818|ref|ZP_06110375.1| GTP pyrophosphokinase [Brucella ceti M490/95/1]
gi|340790286|ref|YP_004755751.1| RelA/SpoT family protein [Brucella pinnipedialis B2/94]
gi|205829112|sp|A5VPI9.1|RSH_BRUO2 RecName: Full=GTP pyrophosphokinase rsh; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase
gi|148370749|gb|ABQ60728.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Brucella ovis ATCC
25840]
gi|255999250|gb|ACU47649.1| RelA/SpoT family protein [Brucella microti CCM 4915]
gi|260920438|gb|EEX87091.1| GTP pyrophosphokinase [Brucella ceti B1/94]
gi|260924067|gb|EEX90635.1| GTP pyrophosphokinase [Brucella ceti M13/05/1]
gi|261294213|gb|EEX97709.1| GTP pyrophosphokinase [Brucella ceti M644/93/1]
gi|261296535|gb|EEY00032.1| GTP pyrophosphokinase [Brucella pinnipedialis B2/94]
gi|261300751|gb|EEY04248.1| GTP pyrophosphokinase [Brucella neotomae 5K33]
gi|261304158|gb|EEY07655.1| GTP pyrophosphokinase [Brucella pinnipedialis M163/99/10]
gi|261737851|gb|EEY25847.1| GTP pyrophosphokinase rsh [Brucella sp. F5/99]
gi|261741733|gb|EEY29659.1| GTP pyrophosphokinase [Brucella suis bv. 5 str. 513]
gi|262552286|gb|EEZ08276.1| GTP pyrophosphokinase [Brucella ceti M490/95/1]
gi|264660548|gb|EEZ30809.1| GTP pyrophosphokinase [Brucella pinnipedialis M292/94/1]
gi|340558745|gb|AEK53983.1| RelA/SpoT family protein [Brucella pinnipedialis B2/94]
Length = 750
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGSQKRA--SGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 126 ISEDVRVLLVKLADRLHNMRTL 147
>gi|365889055|ref|ZP_09427776.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
STM 3809]
gi|365335232|emb|CCE00307.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
STM 3809]
Length = 765
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 80/139 (57%), Gaps = 11/139 (7%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++PD +++ +A +A H Q R G PY HP+ VA ILT L K+ + I++A
Sbjct: 49 YNPDTNEDLLNRAYVYAMKAHGSQTRA--SGDPYFTHPLEVAAILTDL-KLDD-ATIVAA 104
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
LLHDT+EDT+ T EI+R FGP + ++VE LT K + R+ Q +L A
Sbjct: 105 LLHDTIEDTEATRAEIDRFFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADD 164
Query: 192 HEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 165 VRVLLVKLADRLHNMRTLE 183
>gi|225852173|ref|YP_002732406.1| RelA/SpoT family protein [Brucella melitensis ATCC 23457]
gi|256264316|ref|ZP_05466848.1| GTP pyrophosphokinase rsh [Brucella melitensis bv. 2 str. 63/9]
gi|265994600|ref|ZP_06107157.1| GTP pyrophosphokinase [Brucella melitensis bv. 3 str. Ether]
gi|384211036|ref|YP_005600118.1| RelA/SpoT family protein [Brucella melitensis M5-90]
gi|384408127|ref|YP_005596748.1| RelA/SpoT family protein [Brucella melitensis M28]
gi|384444742|ref|YP_005603461.1| RelA/SpoT family protein [Brucella melitensis NI]
gi|225640538|gb|ACO00452.1| RelA/SpoT family protein [Brucella melitensis ATCC 23457]
gi|262765713|gb|EEZ11502.1| GTP pyrophosphokinase [Brucella melitensis bv. 3 str. Ether]
gi|263094589|gb|EEZ18387.1| GTP pyrophosphokinase rsh [Brucella melitensis bv. 2 str. 63/9]
gi|326408674|gb|ADZ65739.1| RelA/SpoT family protein [Brucella melitensis M28]
gi|326538399|gb|ADZ86614.1| RelA/SpoT family protein [Brucella melitensis M5-90]
gi|349742738|gb|AEQ08281.1| RelA/SpoT family protein [Brucella melitensis NI]
Length = 750
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGSQKRA--SGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 126 ISEDVRVLLVKLADRLHNMRTL 147
>gi|367475461|ref|ZP_09474920.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS 285]
gi|365272177|emb|CCD87388.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS 285]
Length = 768
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 80/139 (57%), Gaps = 11/139 (7%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++PD +++ +A +A H Q R G PY HP+ VA ILT L K+ + I++A
Sbjct: 51 YNPDTNEDLLNRAYVYAMKAHGSQTRA--SGDPYFTHPLEVAAILTDL-KLDD-ATIVAA 106
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
LLHDT+EDT+ T EI+R FGP + ++VE LT K + R+ Q +L A
Sbjct: 107 LLHDTIEDTEATRAEIDRFFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADD 166
Query: 192 HEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 167 VRVLLVKLADRLHNMRTLE 185
>gi|161618623|ref|YP_001592510.1| RelA/SpoT family protein [Brucella canis ATCC 23365]
gi|376274598|ref|YP_005115037.1| RelA/SpoT family protein [Brucella canis HSK A52141]
gi|161335434|gb|ABX61739.1| RelA/SpoT family protein [Brucella canis ATCC 23365]
gi|363403165|gb|AEW13460.1| RelA/SpoT family protein [Brucella canis HSK A52141]
Length = 750
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGSQKRA--SGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 126 ISEDVRVLLVKLADRLHNMRTL 147
>gi|23501539|ref|NP_697666.1| RelA/SpoT family protein [Brucella suis 1330]
gi|260566767|ref|ZP_05837237.1| GTP pyrophosphokinase rsh [Brucella suis bv. 4 str. 40]
gi|261754639|ref|ZP_05998348.1| GTP pyrophosphokinase [Brucella suis bv. 3 str. 686]
gi|376280332|ref|YP_005154338.1| RelA/SpoT family protein [Brucella suis VBI22]
gi|384224326|ref|YP_005615490.1| RelA/SpoT family protein [Brucella suis 1330]
gi|81741540|sp|Q8CY42.1|RSH_BRUSU RecName: Full=GTP pyrophosphokinase rsh; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase
gi|23347449|gb|AAN29581.1| RelA/SpoT family protein [Brucella suis 1330]
gi|260156285|gb|EEW91365.1| GTP pyrophosphokinase rsh [Brucella suis bv. 4 str. 40]
gi|261744392|gb|EEY32318.1| GTP pyrophosphokinase [Brucella suis bv. 3 str. 686]
gi|343382506|gb|AEM17998.1| RelA/SpoT family protein [Brucella suis 1330]
gi|358257931|gb|AEU05666.1| RelA/SpoT family protein [Brucella suis VBI22]
Length = 750
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGSQKRA--SGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 126 ISEDVRVLLVKLADRLHNMRTL 147
>gi|365959367|ref|YP_004940934.1| GTP diphosphokinase [Flavobacterium columnare ATCC 49512]
gi|365736048|gb|AEW85141.1| GTP diphosphokinase [Flavobacterium columnare ATCC 49512]
Length = 739
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 11/131 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVS-NPVVIISALLHDTVED 145
I KA DFA H QRRK G YI HP+AVA I+ G++ I +ALLHD VED
Sbjct: 36 IRKAFDFAVDAHQDQRRK--SGEAYIFHPIAVAKIVA--GEIGLGATGIAAALLHDVVED 91
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKL 199
TD + EEIE+ F P+V +V LT + +D Q +L + ++KL
Sbjct: 92 TDISVEEIEKAFNPKVAQLVAGLTKISQVKKDMNISMQAENFRKMLLTLNDDVRVIIIKL 151
Query: 200 ADKLHNLRDIE 210
AD+LHN++ +E
Sbjct: 152 ADRLHNMQTME 162
>gi|163842924|ref|YP_001627328.1| RelA/SpoT family protein [Brucella suis ATCC 23445]
gi|163673647|gb|ABY37758.1| RelA/SpoT family protein [Brucella suis ATCC 23445]
Length = 750
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGSQKRA--SGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 126 ISEDVRVLLVKLADRLHNMRTL 147
>gi|159902750|ref|YP_001550094.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus str. MIT 9211]
gi|159887926|gb|ABX08140.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9211]
Length = 776
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 76/146 (52%), Gaps = 14/146 (9%)
Query: 72 GDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNP 131
G DS +A+ I A D A H Q R G PYI HPVAVA +L +G + P
Sbjct: 56 GLGDSCPRDSEAL--IANAFDLAFRLHKGQFR--ASGDPYIVHPVAVADLLQEIG--AGP 109
Query: 132 VVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD-------NKHMTRDERKRCQI 184
VI + LLHD +EDTD T E+++ FG V +VE +T N+ + E R
Sbjct: 110 TVIAAGLLHDAIEDTDLTLEQLQSFFGNEVAGLVEGVTKLGGIHVTNRTEAQAENLRKMF 169
Query: 185 LHAPHSSHEAKLVKLADKLHNLRDIE 210
L A S LVKLAD+LHN+R ++
Sbjct: 170 L-AMASDIRVVLVKLADRLHNMRTLD 194
>gi|410493960|ref|YP_006903806.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|410439120|emb|CCI61748.1| K00951 GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 739
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 17/142 (11%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
M+ DA + KA D+A+ H +Q RK G PYI HP+ VA IL L + V +
Sbjct: 20 MNETDAAF-VKKALDYATAAHFYQVRK--SGEPYIVHPIQVAGILADLH--LDAVTVACG 74
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAP 188
LHD VEDTD T + IE +FG VR +V+ +T + + + RK +L A
Sbjct: 75 FLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAM 131
Query: 189 HSSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 132 SKDIRVILVKLADRLHNMRTLK 153
>gi|318040683|ref|ZP_07972639.1| metal dependent phosphohydrolase [Synechococcus sp. CB0101]
Length = 776
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 75/148 (50%), Gaps = 16/148 (10%)
Query: 69 PDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKV 128
P GDS DA + A FA H Q R G PYI HPVAVA +L +G
Sbjct: 49 PGAGDS----CPTDAEGLLASAFHFAFQLHDGQVR--ASGEPYICHPVAVADLLRDIGAS 102
Query: 129 SNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD-------NKHMTRDERKR 181
+ VI + LHD VEDTD T EEIE+ FG VR +VE +T NK + E R
Sbjct: 103 AG--VIAAGFLHDVVEDTDVTPEEIEQHFGLEVRGLVEGVTKLGGIHFTNKTEAQAENLR 160
Query: 182 CQILHAPHSSHEAKLVKLADKLHNLRDI 209
L A S LVKLAD+LHN+R +
Sbjct: 161 RMFL-AMASDIRVVLVKLADRLHNMRTL 187
>gi|62289612|ref|YP_221405.1| RelA/SpoT family protein [Brucella abortus bv. 1 str. 9-941]
gi|82699540|ref|YP_414114.1| amino acid-binding ACT domain-containing protein [Brucella
melitensis biovar Abortus 2308]
gi|260545632|ref|ZP_05821373.1| GTP pyrophosphokinase rsh [Brucella abortus NCTC 8038]
gi|260754415|ref|ZP_05866763.1| GTP pyrophosphokinase [Brucella abortus bv. 6 str. 870]
gi|260757634|ref|ZP_05869982.1| GTP pyrophosphokinase [Brucella abortus bv. 4 str. 292]
gi|260761461|ref|ZP_05873804.1| GTP pyrophosphokinase [Brucella abortus bv. 2 str. 86/8/59]
gi|260883443|ref|ZP_05895057.1| GTP pyrophosphokinase [Brucella abortus bv. 9 str. C68]
gi|261213661|ref|ZP_05927942.1| GTP pyrophosphokinase [Brucella abortus bv. 3 str. Tulya]
gi|297248024|ref|ZP_06931742.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 5 str. B3196]
gi|376273617|ref|YP_005152195.1| GTP pyrophosphokinase [Brucella abortus A13334]
gi|423167209|ref|ZP_17153912.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI435a]
gi|423170414|ref|ZP_17157089.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI474]
gi|423173505|ref|ZP_17160176.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI486]
gi|423177210|ref|ZP_17163856.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI488]
gi|423179845|ref|ZP_17166486.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI010]
gi|423182977|ref|ZP_17169614.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI016]
gi|423186081|ref|ZP_17172695.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI021]
gi|423189220|ref|ZP_17175830.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI259]
gi|75497087|sp|Q57E90.1|RSH_BRUAB RecName: Full=GTP pyrophosphokinase rsh; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase
gi|123768435|sp|Q2YN11.1|RSH_BRUA2 RecName: Full=GTP pyrophosphokinase rsh; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase
gi|62195744|gb|AAX74044.1| RelA/SpoT family protein [Brucella abortus bv. 1 str. 9-941]
gi|82615641|emb|CAJ10628.1| Amino acid-binding ACT:Metal dependent phosphohydrolase, HD
region:TGS domain:RelA/SpoT protein:Metal-dependent
phosphohydrol [Brucella melitensis biovar Abortus 2308]
gi|260097039|gb|EEW80914.1| GTP pyrophosphokinase rsh [Brucella abortus NCTC 8038]
gi|260667952|gb|EEX54892.1| GTP pyrophosphokinase [Brucella abortus bv. 4 str. 292]
gi|260671893|gb|EEX58714.1| GTP pyrophosphokinase [Brucella abortus bv. 2 str. 86/8/59]
gi|260674523|gb|EEX61344.1| GTP pyrophosphokinase [Brucella abortus bv. 6 str. 870]
gi|260872971|gb|EEX80040.1| GTP pyrophosphokinase [Brucella abortus bv. 9 str. C68]
gi|260915268|gb|EEX82129.1| GTP pyrophosphokinase [Brucella abortus bv. 3 str. Tulya]
gi|297175193|gb|EFH34540.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 5 str. B3196]
gi|363401223|gb|AEW18193.1| GTP pyrophosphokinase rsh [Brucella abortus A13334]
gi|374541340|gb|EHR12836.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI474]
gi|374541632|gb|EHR13126.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI435a]
gi|374542834|gb|EHR14321.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI486]
gi|374549690|gb|EHR21132.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI010]
gi|374550209|gb|EHR21648.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI016]
gi|374551717|gb|EHR23149.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI488]
gi|374557763|gb|EHR29158.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI259]
gi|374559469|gb|EHR30857.1| GTP pyrophosphokinase rsh [Brucella abortus bv. 1 str. NI021]
Length = 750
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGSQKRA--SGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 126 ISEDVRVLLVKLADRLHNMRTL 147
>gi|357237402|ref|ZP_09124743.1| RelA/SpoT family protein [Streptococcus ictaluri 707-05]
gi|356753592|gb|EHI70695.1| RelA/SpoT family protein [Streptococcus ictaluri 707-05]
Length = 739
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA D+A+ H +Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALDYATAAHFYQIRK--SGEPYIVHPIQVAAILADLH--LDAVTVACGFLHDVVEDTDI 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T E IE +FG VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLENIEADFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
AD+LHN+R ++
Sbjct: 143 ADRLHNMRTLK 153
>gi|417753006|ref|ZP_12401162.1| GTP diphosphokinase [Streptococcus dysgalactiae subsp. equisimilis
SK1249]
gi|333771103|gb|EGL48067.1| GTP diphosphokinase [Streptococcus dysgalactiae subsp. equisimilis
SK1249]
Length = 739
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 17/142 (11%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
M+ DA + KA D+A+ H +Q RK G PYI HP+ VA IL L + V +
Sbjct: 20 MNETDAAF-VKKALDYATAAHFYQVRK--SGEPYIVHPIQVAGILADLH--LDAVTVACG 74
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAP 188
LHD VEDTD T + IE +FG VR +V+ +T + + + RK +L A
Sbjct: 75 FLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAM 131
Query: 189 HSSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 132 SKDIRVILVKLADRLHNMRTLK 153
>gi|440680395|ref|YP_007155190.1| (p)ppGpp synthetase I, SpoT/RelA [Anabaena cylindrica PCC 7122]
gi|428677514|gb|AFZ56280.1| (p)ppGpp synthetase I, SpoT/RelA [Anabaena cylindrica PCC 7122]
Length = 758
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 88/184 (47%), Gaps = 17/184 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +A H Q RK G YI HPVAVA +L LG +P +I + LHD VEDT
Sbjct: 44 ICRAFKYAYQLHQGQYRK--SGEAYIAHPVAVASLLRDLG--GSPAMIAAGFLHDVVEDT 99
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
+ T E+IE FG VR +VE +T + + Q + A +VKLA
Sbjct: 100 EVTIEQIEELFGAEVRLLVEGVTKLSKINFTSKTESQAENFRRMFLAMAQDIRVIVVKLA 159
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R ++ +E + + RD+ L R I+ EL+ L KY P
Sbjct: 160 DRLHNMRTLQYM-----SEASRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKYLEPD 214
Query: 259 EGRE 262
RE
Sbjct: 215 AFRE 218
>gi|386316165|ref|YP_006012329.1| (p)ppGpp synthetase [Streptococcus dysgalactiae subsp. equisimilis
ATCC 12394]
gi|323126452|gb|ADX23749.1| (p)ppGpp synthetase [Streptococcus dysgalactiae subsp. equisimilis
ATCC 12394]
Length = 739
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 17/142 (11%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
M+ DA + KA D+A+ H +Q RK G PYI HP+ VA IL L + V +
Sbjct: 20 MNETDAAF-VKKALDYATAAHFYQVRK--SGEPYIVHPIQVAGILADLH--LDAVTVACG 74
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAP 188
LHD VEDTD T + IE +FG VR +V+ +T + + + RK +L A
Sbjct: 75 FLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAM 131
Query: 189 HSSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 132 SKDIRVILVKLADRLHNMRTLK 153
>gi|428305760|ref|YP_007142585.1| (p)ppGpp synthetase I SpoT/RelA [Crinalium epipsammum PCC 9333]
gi|428247295|gb|AFZ13075.1| (p)ppGpp synthetase I, SpoT/RelA [Crinalium epipsammum PCC 9333]
Length = 761
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 71/130 (54%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +F + H QRR G PYI HPVAVA +L LG + +I + LHD VEDT
Sbjct: 54 ICRAFEFGYNLHDGQRR--ASGEPYICHPVAVAGLLRDLG--GSGAMIAAGFLHDIVEDT 109
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
D T +++E+ FG VR +VE +T + +K Q + A +VKLA
Sbjct: 110 DVTSDDLEKMFGKEVRQLVEGVTKLSKLNFSSKKERQAENFRRMFIAMAHDIRVIVVKLA 169
Query: 201 DKLHNLRDIE 210
D+LHN+R +E
Sbjct: 170 DRLHNMRTLE 179
>gi|306845253|ref|ZP_07477829.1| RelA/SpoT family protein [Brucella inopinata BO1]
gi|306274412|gb|EFM56219.1| RelA/SpoT family protein [Brucella inopinata BO1]
Length = 750
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGSQKRA--SGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 126 ISEDVRVLLVKLADRLHNMRTL 147
>gi|167746626|ref|ZP_02418753.1| hypothetical protein ANACAC_01337 [Anaerostipes caccae DSM 14662]
gi|167653586|gb|EDR97715.1| RelA/SpoT family protein [Anaerostipes caccae DSM 14662]
Length = 758
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 95/189 (50%), Gaps = 18/189 (9%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++S + I + +A D A H Q+RK G PYI HP+ VA IL L + II+
Sbjct: 39 LYSDEDIEMVSRAYDMAFEAHKDQKRKS--GEPYIIHPICVAIILAELE--LDRETIIAG 94
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERK-------RCQILHAPHS 190
LLHD VEDTD T+E++ REFG V +V+ +T ++ + K ++ A
Sbjct: 95 LLHDVVEDTDVTYEDVVREFGVEVAQLVDGVTKLGQLSYSKDKIEVQAENLRKMFLAMAK 154
Query: 191 SHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELD 248
L+KLAD+LHN+R ++ P E++ + D+ + R + I+ ELD
Sbjct: 155 DIRVILIKLADRLHNMRTMQFMKP-----EKQKEKSRETMDIYAPIAHRLGISKIKVELD 209
Query: 249 ALFAKYCTP 257
L +Y P
Sbjct: 210 DLSLRYLKP 218
>gi|121602722|ref|YP_988784.1| GTP pyrophosphokinase [Bartonella bacilliformis KC583]
gi|421760589|ref|ZP_16197405.1| GTP pyrophosphokinase [Bartonella bacilliformis INS]
gi|120614899|gb|ABM45500.1| GTP pyrophosphokinase [Bartonella bacilliformis KC583]
gi|411175006|gb|EKS45033.1| GTP pyrophosphokinase [Bartonella bacilliformis INS]
Length = 742
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 72/134 (53%), Gaps = 12/134 (8%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
+A++N KA +A KH QRR G PY HPV VA ILT + + I ALLHD
Sbjct: 20 EALLN--KAYAYAMQKHAHQRR--ASGDPYFSHPVEVAAILTDMR--LDEATIAVALLHD 73
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAK 195
T+EDT T EEI++ FG + +VE LT + +K Q +L A
Sbjct: 74 TIEDTSATREEIDQLFGAEIGKLVEGLTKLNKLDFVSKKAVQAENLRKLLIAISDDFRVF 133
Query: 196 LVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 134 LVKLADRLHNMRTL 147
>gi|331092370|ref|ZP_08341196.1| hypothetical protein HMPREF9477_01839 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401394|gb|EGG80980.1| hypothetical protein HMPREF9477_01839 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 177
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA FA+ H Q RK + PYI HP+ V IL+ + ++ VI + +LHDT+ED
Sbjct: 4 KAIRFATKAHEGQFRKGTD-RPYIVHPLEVGKILSEM--TADEQVIAAGILHDTIEDCKE 60
Query: 149 TFEEIER-EFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLR 207
EEI R EFG R+ ++V +++K + ERK I + E + + LADKL N+R
Sbjct: 61 VTEEILRQEFGERITTMVLHESEDKTKSWKERKSATIEKLKTAPLEVQYIGLADKLSNIR 120
Query: 208 DIERSLPV 215
DI+R P+
Sbjct: 121 DIDRDYPI 128
>gi|414167177|ref|ZP_11423406.1| RelA/SpoT family protein [Afipia clevelandensis ATCC 49720]
gi|410890994|gb|EKS38792.1| RelA/SpoT family protein [Afipia clevelandensis ATCC 49720]
Length = 759
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q+R G PY HP+ VA ILT+L K+ + I++ALLHDT+EDT++
Sbjct: 62 RAYVYAMMAHGEQKRA--SGDPYFSHPLEVAAILTNL-KLDD-ATIVAALLHDTIEDTES 117
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EI++ FGP + ++VE LT K + R+ Q +L A LVKLAD+
Sbjct: 118 TRAEIDQIFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAISDDVRVLLVKLADR 177
Query: 203 LHNLRDIE 210
LHN+R +E
Sbjct: 178 LHNMRTME 185
>gi|338974861|ref|ZP_08630217.1| GTP pyrophosphokinase/ Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Bradyrhizobiaceae bacterium
SG-6C]
gi|338231956|gb|EGP07090.1| GTP pyrophosphokinase/ Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Bradyrhizobiaceae bacterium
SG-6C]
Length = 749
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q+R G PY HP+ VA ILT+L K+ + I++ALLHDT+EDT++
Sbjct: 52 RAYVYAMMAHGEQKRA--SGDPYFSHPLEVAAILTNL-KLDD-ATIVAALLHDTIEDTES 107
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EI++ FGP + ++VE LT K + R+ Q +L A LVKLAD+
Sbjct: 108 TRAEIDQIFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAISDDVRVLLVKLADR 167
Query: 203 LHNLRDIE 210
LHN+R +E
Sbjct: 168 LHNMRTME 175
>gi|225627154|ref|ZP_03785192.1| RelA/SpoT family protein [Brucella ceti str. Cudo]
gi|225617989|gb|EEH15033.1| RelA/SpoT family protein [Brucella ceti str. Cudo]
Length = 760
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 24 YKPDVNEALLN--KAYVYAMQKHGSQKRA--SGDPYFSHPLEVAAILTDMHLDEAT---- 75
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 76 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 135
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 136 ISEDVRVLLVKLADRLHNMRTL 157
>gi|302558006|ref|ZP_07310348.1| GTP diphosphokinase [Streptomyces griseoflavus Tu4000]
gi|302475624|gb|EFL38717.1| GTP diphosphokinase [Streptomyces griseoflavus Tu4000]
Length = 761
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 84/161 (52%), Gaps = 16/161 (9%)
Query: 79 HSPDAIMNIVK-ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PDA + I++ A A H Q RK G PYI HP+AV IL LG + + ++
Sbjct: 103 HHPDADLEILRRAYVLAESSHRGQMRK--SGEPYITHPLAVTLILAELG--AETTTLTAS 158
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSH 192
LLHDTVEDTD T E++ EFG VR +V+ +T D E R ++L A +
Sbjct: 159 LLHDTVEDTDVTLEQVGEEFGEEVRYLVDGVTKLEKVDYGAAAEPETFR-KMLVATGNDV 217
Query: 193 EAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
+KLAD+LHN+R + P E++ + RDV+
Sbjct: 218 RVMSIKLADRLHNMRTLGVMRP-----EKQERIAKVTRDVL 253
>gi|284991594|ref|YP_003410148.1| (p)ppGpp synthetase I SpoT/RelA [Geodermatophilus obscurus DSM
43160]
gi|284064839|gb|ADB75777.1| (p)ppGpp synthetase I, SpoT/RelA [Geodermatophilus obscurus DSM
43160]
Length = 861
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 76/140 (54%), Gaps = 10/140 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A D A H Q+RK G PYI HP+AVA IL LG + +++ALLHDTVEDT
Sbjct: 152 RAYDVAEAAHATQKRK--SGDPYITHPLAVATILAGLGM--DTTTLVAALLHDTVEDTGQ 207
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLH 204
T E I FGP V +V+ +T + + + + + A ++KLAD+LH
Sbjct: 208 TLESIREAFGPEVAHLVDGVTKIDRVKLGDAAQAETIRKMIVAMARDPRVLVIKLADRLH 267
Query: 205 NLRDIERSLPVNWTEERKTQ 224
N+R + R LP +ERK +
Sbjct: 268 NMRTL-RFLPPE-KQERKAR 285
>gi|444311641|ref|ZP_21147245.1| (p)ppGpp synthetase I SpoT/RelA [Ochrobactrum intermedium M86]
gi|443484971|gb|ELT47769.1| (p)ppGpp synthetase I SpoT/RelA [Ochrobactrum intermedium M86]
Length = 748
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGSQKR--ASGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 126 ISEDVRVLLVKLADRLHNMRTL 147
>gi|153955745|ref|YP_001396510.1| RelA protein [Clostridium kluyveri DSM 555]
gi|146348603|gb|EDK35139.1| RelA [Clostridium kluyveri DSM 555]
Length = 726
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 18/193 (9%)
Query: 75 DSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVI 134
D ++ D M + KA FA H Q+R+ G PYI HPV VA IL +G + I
Sbjct: 10 DENCNNIDEKM-VKKAYYFADEAHKKQKRES--GEPYIMHPVEVACILAEMG--MDTSTI 64
Query: 135 ISALLHDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAP 188
++ LLHD VEDT+ + E++ REF V ++VE +L ++ T++E++ + L A
Sbjct: 65 VAGLLHDIVEDTEFSREDVSREFSVEVANLVEGVTKLGKIEYKTKEEQQADNVRKMLLAM 124
Query: 189 HSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAE 246
L+KLAD+LHN+R + + LPV +E+ + F D+ L R + I+ E
Sbjct: 125 SDDIRVILIKLADRLHNMRTL-KFLPVKKQKEKAKETF----DIYAPLAYRLGMSKIKWE 179
Query: 247 LDALFAKYCTPRE 259
L+ L +Y E
Sbjct: 180 LEDLAFRYINQNE 192
>gi|2498843|sp|Q54089.1|RELA_STREQ RecName: Full=Bifunctional (p)ppGpp synthase/hydrolase RelA;
Includes: RecName: Full=GTP pyrophosphokinase; AltName:
Full=(p)ppGpp synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=Stringent
response-like protein; AltName: Full=ppGpp synthase I;
Includes: RecName: Full=Guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|407881|emb|CAA51353.1| stringent response-like protein [Streptococcus dysgalactiae subsp.
equisimilis]
gi|742310|prf||2009358E stringent response-like protein
Length = 739
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 17/142 (11%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
M+ DA + KA D+A+ H +Q RK G PYI HP+ VA IL L + V +
Sbjct: 20 MNETDAAF-VKKALDYATAAHFYQVRK--SGEPYIVHPIQVAGILADLH--LDAVTVACG 74
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAP 188
LHD VEDTD T + IE +FG VR +V+ +T + + + RK +L A
Sbjct: 75 FLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAM 131
Query: 189 HSSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 132 SKDIRVILVKLADRLHNMRTLK 153
>gi|417927861|ref|ZP_12571249.1| RelA/SpoT family protein [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340765735|gb|EGR88261.1| RelA/SpoT family protein [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
Length = 739
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 17/142 (11%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
M+ DA + KA D+A+ H +Q RK G PYI HP+ VA IL L + V +
Sbjct: 20 MNETDAAF-VKKALDYATAAHFYQVRK--SGEPYIVHPIQVAGILADLH--LDAVTVACG 74
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAP 188
LHD VEDTD T + IE +FG VR +V+ +T + + + RK +L A
Sbjct: 75 FLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAM 131
Query: 189 HSSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 132 SKDIRVILVKLADRLHNMRTLK 153
>gi|251781660|ref|YP_002995962.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390289|dbj|BAH80748.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 739
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 17/142 (11%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
M+ DA + KA D+A+ H +Q RK G PYI HP+ VA IL L + V +
Sbjct: 20 MNETDAAF-VKKALDYATAAHFYQVRK--SGEPYIVHPIQVAGILADLH--LDAVTVACG 74
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAP 188
LHD VEDTD T + IE +FG VR +V+ +T + + + RK +L A
Sbjct: 75 FLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAM 131
Query: 189 HSSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 132 SKDIRVILVKLADRLHNMRTLK 153
>gi|153009963|ref|YP_001371178.1| (p)ppGpp synthetase I SpoT/RelA [Ochrobactrum anthropi ATCC 49188]
gi|151561851|gb|ABS15349.1| (p)ppGpp synthetase I, SpoT/RelA [Ochrobactrum anthropi ATCC 49188]
Length = 748
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGSQKR--ASGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 126 ISEDVRVLLVKLADRLHNMRTL 147
>gi|404320746|ref|ZP_10968679.1| (p)ppGpp synthetase I SpoT/RelA [Ochrobactrum anthropi CTS-325]
Length = 748
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGSQKR--ASGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 126 ISEDVRVLLVKLADRLHNMRTL 147
>gi|158316894|ref|YP_001509402.1| (p)ppGpp synthetase I SpoT/RelA [Frankia sp. EAN1pec]
gi|158112299|gb|ABW14496.1| (p)ppGpp synthetase I, SpoT/RelA [Frankia sp. EAN1pec]
Length = 927
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
I +++A A H Q R+ G PYI HP+AVA +L LG + +I+ALLHDTV
Sbjct: 80 ISAVIRAYSVADGLHAGQTRR--SGDPYISHPLAVAEVLAELGV--DTTTLIAALLHDTV 135
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKL 199
EDT T E + EFG V ++V+ +T M E + L A + ++K+
Sbjct: 136 EDTGYTLESVAAEFGGEVANLVDGVTKLDKMRFGEAAEAETLRKLIVALARDYRVLVIKI 195
Query: 200 ADKLHNLRDI 209
AD+LHN+R +
Sbjct: 196 ADRLHNMRTL 205
>gi|283457999|ref|YP_003362606.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Rothia
mucilaginosa DY-18]
gi|283134021|dbj|BAI64786.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Rothia
mucilaginosa DY-18]
Length = 842
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
H + I + +A + A+ H Q+RK G PYI HPVAV IL +G + PV + + L
Sbjct: 112 HPDEDIQVLQRAYEVANRCHEGQKRKS--GDPYITHPVAVTAILAEMG-ATGPV-LAAGL 167
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAK--- 195
LHDTVEDTD T E++ EFG V +V+ +T MT E + + S
Sbjct: 168 LHDTVEDTDYTMEQLTEEFGEEVAYLVDGVTKLDKMTYGENASIETIRKLVLSMSKDIRV 227
Query: 196 -LVKLADKLHNLR 207
L+KLAD+LHN R
Sbjct: 228 LLIKLADRLHNAR 240
>gi|408400921|ref|YP_006858884.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|407967149|dbj|BAM60387.1| GTP pyrophosphokinase [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 739
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 17/142 (11%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
M+ DA + KA D+A+ H +Q RK G PYI HP+ VA IL L + V +
Sbjct: 20 MNETDAAF-VKKALDYATAAHFYQVRK--SGEPYIVHPIQVAGILADLH--LDAVTVACG 74
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAP 188
LHD VEDTD T + IE +FG VR +V+ +T + + + RK +L A
Sbjct: 75 FLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAM 131
Query: 189 HSSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 132 SKDIRVILVKLADRLHNMRTLK 153
>gi|237815107|ref|ZP_04594105.1| RelA/SpoT family protein [Brucella abortus str. 2308 A]
gi|237789944|gb|EEP64154.1| RelA/SpoT family protein [Brucella abortus str. 2308 A]
Length = 760
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 24 YKPDVNEALLN--KAYVYAMQKHGSQKRA--SGDPYFSHPLEVAAILTDMHLDEAT---- 75
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 76 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 135
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 136 ISEDVRVLLVKLADRLHNMRTL 157
>gi|219856114|ref|YP_002473236.1| hypothetical protein CKR_2771 [Clostridium kluyveri NBRC 12016]
gi|219569838|dbj|BAH07822.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 733
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 102/193 (52%), Gaps = 18/193 (9%)
Query: 75 DSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVI 134
D ++ D M + KA FA H Q+R+ G PYI HPV VA IL +G + I
Sbjct: 17 DENCNNIDEKM-VKKAYYFADEAHKKQKRES--GEPYIMHPVEVACILAEMG--MDTSTI 71
Query: 135 ISALLHDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAP 188
++ LLHD VEDT+ + E++ REF V ++VE +L ++ T++E++ + L A
Sbjct: 72 VAGLLHDIVEDTEFSREDVSREFSVEVANLVEGVTKLGKIEYKTKEEQQADNVRKMLLAM 131
Query: 189 HSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAE 246
L+KLAD+LHN+R + + LPV +E+ + F D+ L R + I+ E
Sbjct: 132 SDDIRVILIKLADRLHNMRTL-KFLPVKKQKEKAKETF----DIYAPLAYRLGMSKIKWE 186
Query: 247 LDALFAKYCTPRE 259
L+ L +Y E
Sbjct: 187 LEDLAFRYINQNE 199
>gi|418056700|ref|ZP_12694752.1| (p)ppGpp synthetase I, SpoT/RelA [Hyphomicrobium denitrificans
1NES1]
gi|353209317|gb|EHB74722.1| (p)ppGpp synthetase I, SpoT/RelA [Hyphomicrobium denitrificans
1NES1]
Length = 739
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 79/139 (56%), Gaps = 12/139 (8%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
+A++N +A +A H Q+R G PY HP+ VA ILT L K+ + I +ALLHD
Sbjct: 20 EALLN--RAYVYAMKAHGNQKR--ASGAPYFSHPLEVAAILTEL-KLDD-ATIATALLHD 73
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAK 195
+EDTD T EI++ FGP + S+V+ LT K + +K Q +L A +
Sbjct: 74 VIEDTDATRAEIDQMFGPEIGSLVDGLTKIKRLDLVSKKAEQAENFRKLLIAISTDIRVL 133
Query: 196 LVKLADKLHNLRDIERSLP 214
LVKLAD+LHN+R +E P
Sbjct: 134 LVKLADRLHNMRTLEHMKP 152
>gi|239831487|ref|ZP_04679816.1| RelA/SpoT family protein [Ochrobactrum intermedium LMG 3301]
gi|239823754|gb|EEQ95322.1| RelA/SpoT family protein [Ochrobactrum intermedium LMG 3301]
Length = 748
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGSQKR--ASGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI++ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 126 ISEDVRVLLVKLADRLHNMRTL 147
>gi|255327189|ref|ZP_05368264.1| GTP pyrophosphokinase [Rothia mucilaginosa ATCC 25296]
gi|255295807|gb|EET75149.1| GTP pyrophosphokinase [Rothia mucilaginosa ATCC 25296]
Length = 825
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
H + I + +A + A+ H Q+RK G PYI HPVAV IL +G + PV + + L
Sbjct: 95 HPDEDIQVLQRAYEVANRCHEGQKRKS--GDPYITHPVAVTAILAEMG-ATGPV-LAAGL 150
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAK--- 195
LHDTVEDTD T E++ EFG V +V+ +T MT E + + S
Sbjct: 151 LHDTVEDTDYTMEQLTEEFGEEVAYLVDGVTKLDKMTYGENASIETIRKLVLSMSKDIRV 210
Query: 196 -LVKLADKLHNLR 207
L+KLAD+LHN R
Sbjct: 211 LLIKLADRLHNAR 223
>gi|422324742|ref|ZP_16405779.1| hypothetical protein HMPREF0737_00889 [Rothia mucilaginosa M508]
gi|353343896|gb|EHB88210.1| hypothetical protein HMPREF0737_00889 [Rothia mucilaginosa M508]
Length = 825
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 72/133 (54%), Gaps = 8/133 (6%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
H + I + +A + A+ H Q+RK G PYI HPVAV IL +G + PV + + L
Sbjct: 95 HPDEDIQVLQRAYEVANRCHEGQKRKS--GDPYITHPVAVTAILAEMG-ATGPV-LAAGL 150
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAK--- 195
LHDTVEDTD T E++ EFG V +V+ +T MT E + + S
Sbjct: 151 LHDTVEDTDYTMEQLTEEFGEEVAYLVDGVTKLDKMTYGENASIETIRKLVLSMSKDIRV 210
Query: 196 -LVKLADKLHNLR 207
L+KLAD+LHN R
Sbjct: 211 LLIKLADRLHNAR 223
>gi|443659642|ref|ZP_21132391.1| relA/SpoT family protein [Microcystis aeruginosa DIANCHI905]
gi|443332660|gb|ELS47256.1| relA/SpoT family protein [Microcystis aeruginosa DIANCHI905]
Length = 739
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
+PD+ + I KA +FA H Q RK G PYI HP+AVA +L LG + +I +
Sbjct: 17 QNPDSDL-ICKAFNFAHKLHEGQYRKS--GEPYIAHPIAVAGLLRDLG--GDGAMIAAGF 71
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHD VEDT+ T EEIE FG VR++VE +T + Q + A
Sbjct: 72 LHDVVEDTEVTPEEIEDRFGVEVRNLVEAVTKLSKFNFSSKTERQAENFRRMFLAMAQDI 131
Query: 193 EAKLVKLADKLHNLRDIE 210
+VKLAD+LHN++ +E
Sbjct: 132 RVIVVKLADRLHNMQTLE 149
>gi|325660691|ref|ZP_08149320.1| hypothetical protein HMPREF0490_00052 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472998|gb|EGC76207.1| hypothetical protein HMPREF0490_00052 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 193
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 76/131 (58%), Gaps = 8/131 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGT--PYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVE 144
I +A FA+ H Q RK GT PYI HP+ V I+ + + +I +A+LHDT+E
Sbjct: 16 IQRAIAFATKAHDGQLRK---GTMRPYILHPLEVGVIVARM--TEDEEIISAAILHDTIE 70
Query: 145 DTD-TTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
D + T + IE+ F RV +V++ +++K T ERK I H + E +++ LADKL
Sbjct: 71 DCEGVTAQMIEQMFSKRVAELVQKESEDKSKTWMERKGATIQHLKVAEREVQMIGLADKL 130
Query: 204 HNLRDIERSLP 214
N+RDI+R P
Sbjct: 131 SNMRDIDRDYP 141
>gi|393781628|ref|ZP_10369822.1| RelA/SpoT family protein [Bacteroides salyersiae CL02T12C01]
gi|392676232|gb|EIY69670.1| RelA/SpoT family protein [Bacteroides salyersiae CL02T12C01]
Length = 749
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 92/188 (48%), Gaps = 20/188 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 39 ITKAFNFANQAHKGIKRR--SGEPYIMHPIAVAQIVCNEIGLGSTS----ICAALLHDVV 92
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FG ++ +V+ LT +R Q +L L+
Sbjct: 93 EDTDYTVEDIENIFGTKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 152
Query: 198 KLADKLHNLRDIERSLP-VNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCT 256
K+AD+LHN+R + LP + +T Y GL I+ EL+ L KY
Sbjct: 153 KIADRLHNMRTLGSMLPNKQYKIAGETLYIYAPLANRLGL----YKIKTELENLSFKYEH 208
Query: 257 PREGRENE 264
P E +E E
Sbjct: 209 PEEYQEIE 216
>gi|386359779|ref|YP_006058024.1| RelA/SpoT family (p)ppGpp synthetase [Thermus thermophilus JL-18]
gi|383508806|gb|AFH38238.1| (p)ppGpp synthetase, RelA/SpoT family [Thermus thermophilus JL-18]
Length = 724
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
+P+ + +A FA H Q R+ G PYI HPVAVA IL L ++ V + LL
Sbjct: 17 TPEERAKVQEAYRFAEEAHRGQLRRS--GEPYITHPVAVAEILAGLQMDADTVA--AGLL 72
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTR-----DERKRC----QILHAPHS 190
HDT+ED EE+ER FGP VR +VE T + + E +R Q+ A
Sbjct: 73 HDTLEDCGVAPEELERRFGPTVRRIVEGETKVSKLYKLANLEGEERRAEDLRQMFIAMAE 132
Query: 191 SHEAKLVKLADKLHNLRDIE 210
+VKLAD+LHNLR +E
Sbjct: 133 DVRIIIVKLADRLHNLRTLE 152
>gi|219115159|ref|XP_002178375.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410110|gb|EEC50040.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 511
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 13/137 (9%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
DA+ I +A A H Q RK G P+I HPV V+ +L+ G + ++S LLHD
Sbjct: 10 DAVAKIYQALCVAYRAHRGQMRKS--GEPFIVHPVEVSLLLS--GLKMDAETVMSGLLHD 65
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTR-------DERKRC--QILHAPHSSH 192
TVEDTD TF+++E FG VRS+VE T + + DE+ Q+ A S +
Sbjct: 66 TVEDTDLTFQQVETLFGHTVRSIVEGETKVSKLPKLAFAEYADEQAENLRQMFVAMTSDY 125
Query: 193 EAKLVKLADKLHNLRDI 209
+VKLAD+LHN+R +
Sbjct: 126 RIIIVKLADRLHNMRTL 142
>gi|260903847|ref|ZP_05912169.1| (p)ppGpp synthetase I, SpoT/RelA [Brevibacterium linens BL2]
Length = 766
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+V+A A H Q RK G YI HPVAVA IL +G + PV + +ALLHDTVEDT
Sbjct: 52 VVRAYKIAEQAHRGQTRK--SGDDYITHPVAVATILAEIGML--PVTLAAALLHDTVEDT 107
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ----ILHAPHSSHEAKLVKLADK 202
+ E+ EFGP V ++V+ +T +T + + + ++ A ++KLAD+
Sbjct: 108 SYSLNELTEEFGPEVAAMVDGVTKLDKLTYGQAAQSETVRKMIVAMAKDIRVLVIKLADR 167
Query: 203 LHNLR 207
LHN R
Sbjct: 168 LHNAR 172
>gi|253578285|ref|ZP_04855557.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850603|gb|EES78561.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 776
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 92/189 (48%), Gaps = 20/189 (10%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
H I I KA AS H Q+RK G PYI HP+ VA IL L + I++ L
Sbjct: 56 HPSTDISMIEKAYKVASEAHEGQKRKS--GEPYIIHPLCVAIILADLE--LDKETIVAGL 111
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTD--------NKHMTRDERKRCQILHAPHS 190
LHD VEDT T+EE+E+EFG V +V+ +T +K + E R L A
Sbjct: 112 LHDAVEDTWMTYEEVEKEFGSEVALLVDGVTKLGQLSYSADKVEVQAENLRKMFL-AMAK 170
Query: 191 SHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQ--GLRGTNAPIEAELD 248
L+KLAD+LHN+R ++ P E++ + D+ +R + I+ ELD
Sbjct: 171 DIRVILIKLADRLHNMRTLQYMRP-----EKQQEKARETMDIYAPIAMRLGISKIKVELD 225
Query: 249 ALFAKYCTP 257
L KY P
Sbjct: 226 DLSLKYLKP 234
>gi|55981686|ref|YP_144983.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB8]
gi|55773099|dbj|BAD71540.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (ppGpp
synthase) [Thermus thermophilus HB8]
Length = 727
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
+P+ + +A FA H Q R+ G PYI HPVAVA IL L ++ V + LL
Sbjct: 20 APEERAKVREAYRFAEEAHRGQLRRS--GEPYITHPVAVAEILAGLQMDADTVA--AGLL 75
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTR-----DERKRC----QILHAPHS 190
HDT+ED EE+ER FGP VR +VE T + + E +R Q+ A
Sbjct: 76 HDTLEDCGVAPEELERRFGPTVRRIVEGETKVSKLYKLANLEGEERRAEDLRQMFIAMAE 135
Query: 191 SHEAKLVKLADKLHNLRDIE 210
+VKLAD+LHNLR +E
Sbjct: 136 DVRIIIVKLADRLHNLRTLE 155
>gi|425443682|ref|ZP_18823753.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9443]
gi|389730348|emb|CCI05359.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9443]
Length = 765
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 11/142 (7%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
+PD+ + I +A +FA H Q RK G PYI HP+AVA +L LG + +I +
Sbjct: 43 QNPDSDL-ICRAFNFAHKLHEGQYRKS--GEPYIAHPIAVAGLLRDLG--GDGAMIAAGF 97
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHD VEDT+ T EEIE FG VR++VE +T + Q + A
Sbjct: 98 LHDVVEDTEVTPEEIEDRFGVEVRNLVEAVTKLSKFNFSSKTERQAENFRRMFLAMAQDI 157
Query: 193 EAKLVKLADKLHNLRDIERSLP 214
+VKLAD+LHN++ +E P
Sbjct: 158 RVIVVKLADRLHNMQTLEHLTP 179
>gi|376242716|ref|YP_005133568.1| hypothetical protein CDCE8392_1027 [Corynebacterium diphtheriae
CDCE 8392]
gi|372105958|gb|AEX72020.1| hypothetical protein CDCE8392_1027 [Corynebacterium diphtheriae
CDCE 8392]
Length = 185
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 15/180 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA A++ H Q+RK + PYI HP +V +L + V I+ALLHD +ED
Sbjct: 6 LAKAISIAAYAHRNQKRKATD-IPYICHPYSV--MLIAQSCTCDEDVFIAALLHDVLEDA 62
Query: 147 DTTFEEIE--REFGPRVRSVVEELTDNKHMT-RDERKRCQILHAPHSSHEAKLVKLADKL 203
+ E E +FGPRV S+V+E+T + ++ ER + H +SHEA +V LADK
Sbjct: 63 AEEYSEHEMLNDFGPRVVSIVKEVTKDSSLSMWQERANSYLTHLETASHEALIVCLADKT 122
Query: 204 HNLR----DIERSLPVNWT-----EERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKY 254
HNL D E W ++R+ +++ DV++ G + P A+ L +++
Sbjct: 123 HNLMSMVADYEAVGDALWARFNAGKDRQLWWYSSVWDVLERRLGKDFPGVADYARLLSRF 182
>gi|254527119|ref|ZP_05139171.1| RelA/SpoT family protein [Prochlorococcus marinus str. MIT 9202]
gi|221538543|gb|EEE40996.1| RelA/SpoT family protein [Prochlorococcus marinus str. MIT 9202]
Length = 769
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA A H Q R G PYI HPVAVA++L +G S+ VI + LLHD VEDT
Sbjct: 63 IAKAFKLAYKAHDGQFR--ASGEPYIIHPVAVANLLKEIGASSS--VIAAGLLHDVVEDT 118
Query: 147 DTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
EIE FG V+ +VE +T +N+ + E R L A S LVKL
Sbjct: 119 GIDLCEIETNFGLEVKILVEGVTKLGGIHFNNRTEAQAENLRKMFL-AMASDIRVVLVKL 177
Query: 200 ADKLHNLRDIERSLPVNW-TEERKTQYFNWARDVVQGLR---GTNAPIEAELDALFAKYC 255
AD+LHN+R IE W +E+K + R++ L G N + EL+ L K+
Sbjct: 178 ADRLHNMRTIE------WLNDEKKLRIARETREIYAPLANRLGINR-FKWELEDLAFKFL 230
Query: 256 TPRE 259
P+E
Sbjct: 231 EPKE 234
>gi|159029396|emb|CAO90772.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 789
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
+PD+ + I KA +FA H Q RK G PYI HP+AVA +L LG + +I +
Sbjct: 67 QNPDSDL-ICKAFNFAHKLHEGQYRKS--GEPYIAHPIAVAGLLRDLG--GDGAMIAAGF 121
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHD VEDT+ T EEIE FG VR++VE +T + Q + A
Sbjct: 122 LHDVVEDTEVTPEEIEDRFGVEVRNLVEAVTKLSKFNFSSKTERQAENFRRMFLAMAQDI 181
Query: 193 EAKLVKLADKLHNLRDIE 210
+VKLAD+LHN++ +E
Sbjct: 182 RVIVVKLADRLHNMQTLE 199
>gi|421836333|ref|ZP_16270846.1| GTP pyrophosphokinase, partial [Clostridium botulinum CFSAN001627]
gi|409741806|gb|EKN41461.1| GTP pyrophosphokinase, partial [Clostridium botulinum CFSAN001627]
Length = 465
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 96/181 (53%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA +FA + H Q+R G PYI HP VA IL +G N +I+ L+HD VEDT
Sbjct: 21 IKKAYNFACNAHKEQKR--ISGEPYITHPEEVAIILFEMGMDVN--TMIAGLMHDVVEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLA 200
T+E++ +EFG V +V +L ++ T++E++ + L A L+KLA
Sbjct: 77 QYTYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQQADNVRKMLLAMTKDIRVILIKLA 136
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R + R +PV +E+ + D+ L R + I+ EL+ L +Y P
Sbjct: 137 DRLHNMRTL-RFMPVEKQKEKAQE----TLDIYAPLAHRLGISKIKWELEDLSFRYINPN 191
Query: 259 E 259
E
Sbjct: 192 E 192
>gi|392389630|ref|YP_006426233.1| RelA/SpoT family (p)ppGpp synthetase [Ornithobacterium
rhinotracheale DSM 15997]
gi|390520708|gb|AFL96439.1| (p)ppGpp synthetase, RelA/SpoT family [Ornithobacterium
rhinotracheale DSM 15997]
Length = 733
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 89/181 (49%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H QRRK G PYI HP+AVA I+ LG S I AL+HD V
Sbjct: 36 IRKAFDLAMDAHKNQRRKS--GDPYIFHPIAVAQIVADEIGLGATS----ISCALMHDVV 89
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSHEAKLVK 198
EDTD T ++IE+ FG + +++ LT +++ ++ ++L L+K
Sbjct: 90 EDTDYTLQDIEKLFGAKFAKIIDGLTKISVLNDQELSIQSENFRKLLLTLSEDVRVILIK 149
Query: 199 LADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCTPR 258
+AD+LHN+R +E P + F +A R I++EL+ L KY P
Sbjct: 150 IADRLHNMRTLESMSPSKQMKIASETIFIYA---PLAHRMGLYNIKSELEDLSLKYTKPE 206
Query: 259 E 259
E
Sbjct: 207 E 207
>gi|336320698|ref|YP_004600666.1| (p)ppGpp synthetase I, SpoT/RelA [[Cellvibrio] gilvus ATCC 13127]
gi|336104279|gb|AEI12098.1| (p)ppGpp synthetase I, SpoT/RelA [[Cellvibrio] gilvus ATCC 13127]
Length = 775
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 81 PDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
P A + +V +A A H Q RK G PYI HPVAVA IL LG P +++ALL
Sbjct: 58 PKADLTVVERAYVVAERAHRGQLRK--SGDPYITHPVAVATILAELGM--TPSTLVAALL 113
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAK 195
HDTVEDT+ + +++ REFGP V +V+ +T + + + + + A
Sbjct: 114 HDTVEDTEYSLDQLRREFGPEVAMLVDGVTKLDKVAYGDAAQAETVRKMVVAMARDIRVL 173
Query: 196 LVKLADKLHNLR 207
++KLAD+LHN R
Sbjct: 174 VIKLADRLHNAR 185
>gi|46199657|ref|YP_005324.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB27]
gi|384431896|ref|YP_005641256.1| (p)ppGpp synthetase I SpoT/RelA [Thermus thermophilus SG0.5JP17-16]
gi|46197283|gb|AAS81697.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB27]
gi|333967364|gb|AEG34129.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus thermophilus
SG0.5JP17-16]
Length = 727
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 73/140 (52%), Gaps = 13/140 (9%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
+P+ + +A FA H Q R+ G PYI HPVAVA IL L ++ V + LL
Sbjct: 20 APEERAKVREAYRFAEEAHRGQLRRS--GEPYITHPVAVAEILAGLQMDADTVA--AGLL 75
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTR-----DERKRC----QILHAPHS 190
HDT+ED EE+ER FGP VR +VE T + + E +R Q+ A
Sbjct: 76 HDTLEDCGVAPEELERRFGPTVRRIVEGETKVSKLYKLANLEGEERRAEDLRQMFIAMAE 135
Query: 191 SHEAKLVKLADKLHNLRDIE 210
+VKLAD+LHNLR +E
Sbjct: 136 DVRIIIVKLADRLHNLRTLE 155
>gi|390437740|ref|ZP_10226267.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis sp. T1-4]
gi|389838856|emb|CCI30391.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis sp. T1-4]
Length = 765
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 11/142 (7%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
+PD+ + I +A +FA H Q RK G PYI HP+AVA +L LG + +I +
Sbjct: 43 QNPDSDL-ICRAFNFAHKLHEGQYRKS--GEPYIAHPIAVAGLLRDLG--GDGAMIAAGF 97
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHD VEDT+ T EEIE FG VR++VE +T + Q + A
Sbjct: 98 LHDVVEDTEVTPEEIEARFGVEVRNLVEAVTKLSKFNFSSKTERQAENFRRMFLAMAQDI 157
Query: 193 EAKLVKLADKLHNLRDIERSLP 214
+VKLAD+LHN++ +E P
Sbjct: 158 RVIVVKLADRLHNMQTLEHLTP 179
>gi|442588845|ref|ZP_21007655.1| GTP pyrophosphokinase [Elizabethkingia anophelis R26]
gi|442561603|gb|ELR78828.1| GTP pyrophosphokinase [Elizabethkingia anophelis R26]
Length = 737
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 76/132 (57%), Gaps = 14/132 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H QRRK G PYI HP+ VA I+ + LG S I SALLHD +
Sbjct: 39 IRKAFDIALDAHKDQRRK--TGEPYIYHPIEVAKIVANEIGLGATS----IASALLHDVI 92
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSHEAKLVK 198
ED+D T+E++E+ FG ++ +V+ LT ++++++ ++L L+K
Sbjct: 93 EDSDYTYEDLEKLFGKKIADIVQGLTKISIMNHQNISVQSENYRKLLMTLSEDFRVILIK 152
Query: 199 LADKLHNLRDIE 210
+AD+LHN+R ++
Sbjct: 153 IADRLHNMRTLD 164
>gi|365875580|ref|ZP_09415108.1| GTP pyrophosphokinase [Elizabethkingia anophelis Ag1]
gi|365756839|gb|EHM98750.1| GTP pyrophosphokinase [Elizabethkingia anophelis Ag1]
Length = 736
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 76/132 (57%), Gaps = 14/132 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H QRRK G PYI HP+ VA I+ + LG S I SALLHD +
Sbjct: 38 IRKAFDIALDAHKDQRRK--TGEPYIYHPIEVAKIVANEIGLGATS----IASALLHDVI 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSHEAKLVK 198
ED+D T+E++E+ FG ++ +V+ LT ++++++ ++L L+K
Sbjct: 92 EDSDYTYEDLEKLFGKKIADIVQGLTKISIMNHQNISVQSENYRKLLMTLSEDFRVILIK 151
Query: 199 LADKLHNLRDIE 210
+AD+LHN+R ++
Sbjct: 152 IADRLHNMRTLD 163
>gi|338738016|ref|YP_004674978.1| GTP pyrophosphokinase [Hyphomicrobium sp. MC1]
gi|337758579|emb|CCB64404.1| GTP pyrophosphokinase [Hyphomicrobium sp. MC1]
Length = 740
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 78/139 (56%), Gaps = 12/139 (8%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
+A++N +A +A H Q+R G PY HP+ VA ILT L K+ + I +ALLHD
Sbjct: 20 EALLN--RAYVYAMKAHGNQKR--ASGAPYFSHPLEVAAILTDL-KLDD-ATIATALLHD 73
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAK 195
+EDTD T EI++ FGP + +V+ LT K + +K Q +L A S
Sbjct: 74 VIEDTDATRSEIDQMFGPEIGGLVDGLTKIKRLDLVSKKAEQAENFRKLLIAISSDIRVL 133
Query: 196 LVKLADKLHNLRDIERSLP 214
LVKLAD+LHN+R +E P
Sbjct: 134 LVKLADRLHNMRTLEHMKP 152
>gi|373116600|ref|ZP_09530752.1| RelA/SpoT family protein [Lachnospiraceae bacterium 7_1_58FAA]
gi|371669167|gb|EHO34270.1| RelA/SpoT family protein [Lachnospiraceae bacterium 7_1_58FAA]
Length = 737
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 78/130 (60%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A +A + H Q RKD G+PYI HP+AVA I+ L ++ II+ALLHD +EDT
Sbjct: 27 LFRAFTYADNAHAGQLRKD--GSPYITHPLAVAEIVAELELDTDS--IIAALLHDCIEDT 82
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
T EEI + FGP V +VE +LT ++ +++E + ++L A L+K+
Sbjct: 83 GATHEEIAKLFGPTVADLVEGVTKLTRVQYTSKEEEQMENLRKMLMAMAKDIRVILIKIC 142
Query: 201 DKLHNLRDIE 210
D+LHN+R +E
Sbjct: 143 DRLHNMRTME 152
>gi|114776357|ref|ZP_01451402.1| GTP pyrophosphokinase [Mariprofundus ferrooxydans PV-1]
gi|114553187|gb|EAU55585.1| GTP pyrophosphokinase [Mariprofundus ferrooxydans PV-1]
Length = 711
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 78 MHSPDAIMNIVK-ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIIS 136
+++P A + ++ A FA+H H Q R G PYI HP+AVA IL LG + +I+
Sbjct: 13 LYAPKANLELINCAYVFAAHAHAGQVR--SSGDPYITHPLAVAGILASLG--MDEASVIT 68
Query: 137 ALLHDTVEDTDTTFEEIEREFGPRVRSVVEELT--DNKHMTRDERKRCQ----ILHAPHS 190
ALLHDTVEDT EIE FG V +V+ +T H E K+ + ++ A
Sbjct: 69 ALLHDTVEDTGVKLSEIEENFGADVARLVDGVTKIGQIHFNSSEHKQAENFRKMILATAK 128
Query: 191 SHEAKLVKLADKLHNLRDI 209
+VKLAD+LHN+R +
Sbjct: 129 DLRVLIVKLADRLHNMRTL 147
>gi|339629624|ref|YP_004721267.1| GTP pyrophosphokinase [Sulfobacillus acidophilus TPY]
gi|379007260|ref|YP_005256711.1| (p)ppGpp synthetase I SpoT/RelA [Sulfobacillus acidophilus DSM
10332]
gi|339287413|gb|AEJ41524.1| GTP pyrophosphokinase [Sulfobacillus acidophilus TPY]
gi|361053522|gb|AEW05039.1| (p)ppGpp synthetase I, SpoT/RelA [Sulfobacillus acidophilus DSM
10332]
Length = 719
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 77/138 (55%), Gaps = 11/138 (7%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
HSP+A I++A +FA H Q R G PYI HP+AVA IL L K+ P I++AL
Sbjct: 15 HSPEA-DQIIRAIEFADEAHRGQSR--ASGEPYIAHPLAVAGILADL-KMDTPT-IVAAL 69
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELT--DNKHMTRDERKRCQILH----APHSSH 192
LHD VEDT T +IE FG V +V+ +T D + E ++ + L A
Sbjct: 70 LHDVVEDTAYTLADIESRFGTEVAQLVDGVTKLDRLEVRTQEEEQAENLRKMFLAMAKDI 129
Query: 193 EAKLVKLADKLHNLRDIE 210
L+KLAD+LHN+R ++
Sbjct: 130 RVILIKLADRLHNMRTLK 147
>gi|269219369|ref|ZP_06163223.1| GTP diphosphokinase [Actinomyces sp. oral taxon 848 str. F0332]
gi|269211162|gb|EEZ77502.1| GTP diphosphokinase [Actinomyces sp. oral taxon 848 str. F0332]
Length = 730
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I+ A + A H H Q RK G PYI HPVAVA IL LG + II ALLHDTVEDT
Sbjct: 14 ILHAFEVADHCHEGQTRK--SGEPYITHPVAVATILAELGMDED--TIIGALLHDTVEDT 69
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADK 202
D ++ REFG V +V+ +T + E + + + A L+KLAD+
Sbjct: 70 DYQLSDLRREFGSAVEVLVDGVTKLDKVEYGEAAQAETVRKMVIAMSKDIRVLLIKLADR 129
Query: 203 LHNLR 207
LHN R
Sbjct: 130 LHNAR 134
>gi|440755832|ref|ZP_20935033.1| relA/SpoT family protein [Microcystis aeruginosa TAIHU98]
gi|440173054|gb|ELP52512.1| relA/SpoT family protein [Microcystis aeruginosa TAIHU98]
Length = 765
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
+PD+ + I +A +FA H Q RK G PYI HP+AVA +L LG + +I +
Sbjct: 43 QNPDSDL-ICRAFNFAYKLHEGQYRKS--GEPYIAHPIAVAGLLRDLG--GDGAMIAAGF 97
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHD VEDT+ T EEIE FG VR++VE +T + Q + A
Sbjct: 98 LHDVVEDTEVTPEEIEARFGVEVRNLVEAVTKLSKFNFSSKTERQAENFRRMFLAMAQDI 157
Query: 193 EAKLVKLADKLHNLRDIE 210
+VKLAD+LHN++ +E
Sbjct: 158 RVIVVKLADRLHNMQTLE 175
>gi|254191966|ref|ZP_04898466.1| GTP pyrophosphokinase [Burkholderia pseudomallei Pasteur 52237]
gi|157987788|gb|EDO95553.1| GTP pyrophosphokinase [Burkholderia pseudomallei Pasteur 52237]
Length = 173
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 73/131 (55%), Gaps = 9/131 (6%)
Query: 85 MNIV-KATDFASHKHHF--QRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
MNIV KA FA+ H QRRK + PYI HP VA I+ G P ++ +A LHD
Sbjct: 1 MNIVEKARIFATAAHAAVDQRRKYTD-EPYINHPQEVAFIVETAG--GTPEMLAAAWLHD 57
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDN---KHMTRDERKRCQILHAPHSSHEAKLVK 198
VEDT E IE+EFG V ++V +LTD +H R+ERKR H + + K +K
Sbjct: 58 VVEDTGVMIETIEQEFGAEVATMVAQLTDVSRPEHGNREERKRIDREHTAQAWPKTKTIK 117
Query: 199 LADKLHNLRDI 209
LAD + N R I
Sbjct: 118 LADLISNSRSI 128
>gi|425460758|ref|ZP_18840239.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9808]
gi|389826500|emb|CCI22900.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9808]
Length = 765
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
+PD+ + I +A +FA H Q RK G PYI HP+AVA +L LG + +I +
Sbjct: 43 QNPDSDL-ICRAFNFAYKLHEGQYRKS--GEPYIAHPIAVAGLLRDLG--GDGAMIAAGF 97
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHD VEDT+ T EEIE FG VR++VE +T + Q + A
Sbjct: 98 LHDVVEDTEVTPEEIEARFGVEVRNLVEAVTKLSKFNFSSKTERQAENFRRMFLAMAQDI 157
Query: 193 EAKLVKLADKLHNLRDIE 210
+VKLAD+LHN++ +E
Sbjct: 158 RVIVVKLADRLHNMQTLE 175
>gi|425452480|ref|ZP_18832297.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 7941]
gi|389765685|emb|CCI08474.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 7941]
Length = 765
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
+PD+ + I +A +FA H Q RK G PYI HP+AVA +L LG + +I +
Sbjct: 43 QNPDSDL-ICRAFNFAYKLHEGQYRKS--GEPYIAHPIAVAGLLRDLG--GDGAMIAAGF 97
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHD VEDT+ T EEIE FG VR++VE +T + Q + A
Sbjct: 98 LHDVVEDTEVTPEEIEARFGVEVRNLVEAVTKLSKFNFSSKTERQAENFRRMFLAMAQDI 157
Query: 193 EAKLVKLADKLHNLRDIE 210
+VKLAD+LHN++ +E
Sbjct: 158 RVIVVKLADRLHNMQTLE 175
>gi|357639018|ref|ZP_09136891.1| RelA/SpoT family protein [Streptococcus urinalis 2285-97]
gi|418417900|ref|ZP_12991092.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
urinalis FB127-CNA-2]
gi|357587472|gb|EHJ56880.1| RelA/SpoT family protein [Streptococcus urinalis 2285-97]
gi|410869430|gb|EKS17391.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
urinalis FB127-CNA-2]
Length = 739
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 72/133 (54%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA D+A+ H +Q RK G PYI HP+ VA IL L + V + LHD VEDT
Sbjct: 28 VKKALDYATAAHFYQARK--SGEPYIIHPIQVAGILADLH--LDAVTVACGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLV 197
D T ++IE +FG VR +V+ +T + + + RK +L A LV
Sbjct: 84 DITLDDIELDFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILV 140
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 141 KLADRLHNMRTLK 153
>gi|375290763|ref|YP_005125303.1| hypothetical protein CD241_1036 [Corynebacterium diphtheriae 241]
gi|376245596|ref|YP_005135835.1| hypothetical protein CDHC01_1036 [Corynebacterium diphtheriae HC01]
gi|376248408|ref|YP_005140352.1| hypothetical protein CDHC04_1041 [Corynebacterium diphtheriae HC04]
gi|376251198|ref|YP_005138079.1| hypothetical protein CDHC03_1030 [Corynebacterium diphtheriae HC03]
gi|376257016|ref|YP_005144907.1| hypothetical protein CDVA01_0998 [Corynebacterium diphtheriae VA01]
gi|371580434|gb|AEX44101.1| hypothetical protein CD241_1036 [Corynebacterium diphtheriae 241]
gi|372108226|gb|AEX74287.1| hypothetical protein CDHC01_1036 [Corynebacterium diphtheriae HC01]
gi|372112702|gb|AEX78761.1| hypothetical protein CDHC03_1030 [Corynebacterium diphtheriae HC03]
gi|372114976|gb|AEX81034.1| hypothetical protein CDHC04_1041 [Corynebacterium diphtheriae HC04]
gi|372119533|gb|AEX83267.1| hypothetical protein CDVA01_0998 [Corynebacterium diphtheriae VA01]
Length = 185
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 15/180 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA A++ H Q+RK + PYI HP +V I+ + + V+I+ALLHD +ED
Sbjct: 6 LAKAISIAAYAHRNQKRKATD-IPYICHPYSVMLIVQSWTR--DEDVLITALLHDVLEDA 62
Query: 147 DTTFEE--IEREFGPRVRSVVEELT-DNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
+ E + +FGPRV S+V+E+T D+ +T ER + H +SH A +V LADK
Sbjct: 63 AEEYSEHDMLNDFGPRVVSIVKEVTKDSSLLTWQERADSYLAHLETASHGALIVCLADKT 122
Query: 204 HNLR----DIERSLPVNWT-----EERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKY 254
HNL D E W ++R+ +++ DV++ G + P A+ L + +
Sbjct: 123 HNLMSMVADYEAVGDALWARFNAGKDRQLWWYSSVWDVLECRLGKDFPGVADYARLLSTF 182
>gi|293375177|ref|ZP_06621464.1| putative GTP diphosphokinase [Turicibacter sanguinis PC909]
gi|292646214|gb|EFF64237.1| putative GTP diphosphokinase [Turicibacter sanguinis PC909]
Length = 730
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ +PD+I I KA + A +H Q RK G PYI HP+ VA+IL + P I S
Sbjct: 22 IKNPDSIAIIEKAFELAYQQHKTQLRKS--GEPYIIHPIEVAYILAKWQ--TGPRTIASG 77
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
LLHD +EDTD T EEI F + ++V+ +T ++ +++ Q +L A
Sbjct: 78 LLHDIIEDTDITKEEIAELFDDEIANIVDGVTKLTKLSYKSKEKQQAENHRKMLLAMSKD 137
Query: 192 HEAKLVKLADKLHNLRDIERSLP 214
LVKLAD+LHN+R ++ P
Sbjct: 138 IRVILVKLADRLHNIRTLKFLAP 160
>gi|398792474|ref|ZP_10553093.1| guanosine polyphosphate synthetase/pyrophosphohydrolase [Pantoea
sp. YR343]
gi|398213062|gb|EJM99659.1| guanosine polyphosphate synthetase/pyrophosphohydrolase [Pantoea
sp. YR343]
Length = 197
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 69/118 (58%), Gaps = 6/118 (5%)
Query: 95 SHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIE 154
+H QRRK + PYI HP AVA ++ + + +I +A LHDTVEDT +T ++IE
Sbjct: 16 AHAAAGQRRKYTD-EPYIVHPAAVAELVRSV--TDDEQMIAAAWLHDTVEDTPSTLDDIE 72
Query: 155 REFGPRVRSVVEELTDNKH---MTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDI 209
R FGPRV +V++LTD+ R RK H +S EA+ +KLAD + N R I
Sbjct: 73 RHFGPRVAELVDQLTDSAQPAAKNRAARKLAHFRHTADASPEAQTIKLADIIDNTRAI 130
>gi|441513494|ref|ZP_20995324.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia amicalis NBRC 100051]
gi|441451792|dbj|GAC53285.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia amicalis NBRC 100051]
Length = 789
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A D A +H Q+RK G PYI HP+AVA IL LG + +I+ALLHDTVEDT
Sbjct: 85 RAYDVAEERHSGQKRK--SGDPYITHPLAVATILADLGM--DTTTLIAALLHDTVEDTGY 140
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLH 204
+ + +ER+FGP V +V+ +T + + + A ++K+AD+LH
Sbjct: 141 SLQALERDFGPEVAHLVDGVTKLDKVALGSAAEAETIRKMIIAMARDPRVLVIKVADRLH 200
Query: 205 NLRDIERSLP 214
N+R + R LP
Sbjct: 201 NMRTM-RFLP 209
>gi|302554598|ref|ZP_07306940.1| ppGpp synthetase/hydrolase [Streptomyces viridochromogenes DSM
40736]
gi|302472216|gb|EFL35309.1| ppGpp synthetase/hydrolase [Streptomyces viridochromogenes DSM
40736]
Length = 722
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 101/214 (47%), Gaps = 31/214 (14%)
Query: 26 KALPKLESGPKGLPLMYVPMVRKGKPEAPAVEVHVHEARLGEAPDTGDSDSGMHSPDAIM 85
KA P+++ G + P R P+A + V H A H PDA +
Sbjct: 30 KARPRIDLRRLGRAALLGPAARDRLPDAISHVVEAHRA---------------HHPDADL 74
Query: 86 N-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVE 144
+ +A A H Q RK G PYI HP+AV IL LG + + ++LLHDTVE
Sbjct: 75 EPLRRAYVLAESSHRGQMRK--SGEPYITHPLAVTLILAELG--AETTTLTASLLHDTVE 130
Query: 145 DTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
DTD T +++ R+FG VR +V+ +T D E R ++L A + +KL
Sbjct: 131 DTDVTLDQVGRQFGEEVRYLVDGVTKLEKVDYGAAAEPETFR-KMLVATGNDVRVMSIKL 189
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
AD+LHN+R + P E++ + RDV+
Sbjct: 190 ADRLHNMRTLGVMRP-----EKQERIAKVTRDVL 218
>gi|291545648|emb|CBL18756.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus sp. SR1/5]
Length = 774
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 92/188 (48%), Gaps = 18/188 (9%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
H I I KA AS H Q+RK G PYI HP+ VA IL L + I++ L
Sbjct: 55 HPSTDISMIEKAYKVASEAHKDQKRKS--GEPYIIHPLCVAIILADLE--LDKETIVAGL 110
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERK-------RCQILHAPHSS 191
LHD VEDT T+EE+E+EFG V +V+ +T ++ + K ++ A
Sbjct: 111 LHDAVEDTWMTYEEVEKEFGSEVALLVDGVTKLGQLSYSKDKVEVQAENLRKMFLAMAKD 170
Query: 192 HEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQ--GLRGTNAPIEAELDA 249
L+KLAD+LHN+R ++ P E++ + D+ +R + I+ ELD
Sbjct: 171 IRVILIKLADRLHNMRTLQYMRP-----EKQQEKARETMDIYAPIAMRLGISKIKVELDD 225
Query: 250 LFAKYCTP 257
L KY P
Sbjct: 226 LSLKYLKP 233
>gi|399064590|ref|ZP_10747487.1| (p)ppGpp synthetase, RelA/SpoT family [Novosphingobium sp. AP12]
gi|398030575|gb|EJL23984.1| (p)ppGpp synthetase, RelA/SpoT family [Novosphingobium sp. AP12]
Length = 697
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 76/134 (56%), Gaps = 12/134 (8%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
+A++N +A + KH Q+R G PY HPV VA ++T L + I++ALLHD
Sbjct: 20 EALLN--RAYVYTVQKHGSQKR--ASGDPYFSHPVEVAGLMTELKL--DQQTIMTALLHD 73
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHEAK 195
TVEDT T EEIE+ FGP V +V+ +L+ + MT ER + L A
Sbjct: 74 TVEDTLATIEEIEKLFGPEVARLVDGVTKLSKIEAMTESERAAENLRKFLLAMSEDLRVL 133
Query: 196 LVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 134 LVKLADRLHNMRTL 147
>gi|392330576|ref|ZP_10275191.1| (p)ppGpp synthetase [Streptococcus canis FSL Z3-227]
gi|391418255|gb|EIQ81067.1| (p)ppGpp synthetase [Streptococcus canis FSL Z3-227]
Length = 739
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA D+A+ H +Q RK G PYI HP+ VA IL L + V + LHD VEDT
Sbjct: 28 VKKALDYATAAHFYQVRK--SGEPYIVHPIQVAGILADLH--LDAVTVACGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLV 197
DTT + IE +FG R +V+ +T + + + RK +L A LV
Sbjct: 84 DTTLDNIEADFGKDARDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILV 140
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 141 KLADRLHNMRTLK 153
>gi|325842229|ref|ZP_08167646.1| GTP diphosphokinase [Turicibacter sp. HGF1]
gi|325489696|gb|EGC92055.1| GTP diphosphokinase [Turicibacter sp. HGF1]
Length = 730
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 77/143 (53%), Gaps = 10/143 (6%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ +PD+I I KA + A +H Q RK G PYI HP+ VA+IL + P I S
Sbjct: 22 IKNPDSIAIIEKAFELAYQQHKTQLRKS--GEPYIIHPIEVAYILAKWQ--TGPRTIASG 77
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
LLHD +EDTD T EEI F + ++V+ +T ++ +++ Q +L A
Sbjct: 78 LLHDIIEDTDITKEEIAELFDDEIANIVDGVTKLTKLSYKSKEKQQAENHRKMLLAMSKD 137
Query: 192 HEAKLVKLADKLHNLRDIERSLP 214
LVKLAD+LHN+R ++ P
Sbjct: 138 IRVILVKLADRLHNIRTLKFLAP 160
>gi|423315609|ref|ZP_17293514.1| RelA/SpoT family protein [Bergeyella zoohelcum ATCC 43767]
gi|405585927|gb|EKB59720.1| RelA/SpoT family protein [Bergeyella zoohelcum ATCC 43767]
Length = 734
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 14/136 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H QRRK G PYI HP+ VA I+ + LG S I ALLHD +
Sbjct: 34 IRKAFDIALDAHKDQRRK--TGEPYIYHPIEVAKIVANEIGLGATS----IACALLHDVI 87
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSHEAKLVK 198
ED++ T+E+I++ FG +V ++V LT + K+++ ++L LVK
Sbjct: 88 EDSEYTYEDIQKLFGDKVANIVSGLTKISVMNQKNISIQSENYRKLLLTLSEDFRVILVK 147
Query: 199 LADKLHNLRDIERSLP 214
+AD+LHN+R +E P
Sbjct: 148 IADRLHNMRTLESMRP 163
>gi|19746884|ref|NP_608020.1| (p)ppGpp synthetase [Streptococcus pyogenes MGAS8232]
gi|19749128|gb|AAL98519.1| (p)ppGpp synthetase [Streptococcus pyogenes MGAS8232]
Length = 739
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA D+A+ H +Q RK G PYI HP+ VA IL L + V + LHD VEDT
Sbjct: 28 VQKALDYATAAHFYQVRK--SGEPYIVHPIQVAAILADLH--LDAVTVACGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLV 197
D T +EIE +FG R +V+ +T + + + RK +L A LV
Sbjct: 84 DITLDEIEADFGQDARDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILV 140
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 141 KLADRLHNMRTLK 153
>gi|160947570|ref|ZP_02094737.1| hypothetical protein PEPMIC_01505 [Parvimonas micra ATCC 33270]
gi|158446704|gb|EDP23699.1| RelA/SpoT family protein [Parvimonas micra ATCC 33270]
Length = 717
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA +F H Q R G PY HPVAVA+IL L + II+ L+HD +EDT
Sbjct: 21 ITKAYNFTKECHEGQFRN--SGEPYFIHPVAVANILADL--YMDDATIIAGLMHDILEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
+ TFEE+ FG + ++V+ +T K + ++ Q +L A +S ++K+A
Sbjct: 77 EVTFEEMSGMFGEEIANLVDGVTKLKKIKYQSKQESQADNLRKMLLAMNSDIRVIIIKIA 136
Query: 201 DKLHNLRDIE 210
D+LHN+R +E
Sbjct: 137 DRLHNIRTLE 146
>gi|60680251|ref|YP_210395.1| RelA/SpoT GTP pyrophosphokinase [Bacteroides fragilis NCTC 9343]
gi|60491685|emb|CAH06437.1| putative RelA/SpoT GTP pyrophosphokinase [Bacteroides fragilis NCTC
9343]
Length = 747
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVAKIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FG ++ +V+ LT +R Q +L L+
Sbjct: 92 EDTDYTVEDIENIFGAKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|90407204|ref|ZP_01215391.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Psychromonas sp. CNPT3]
gi|90311627|gb|EAS39725.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Psychromonas sp. CNPT3]
Length = 714
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 75/141 (53%), Gaps = 10/141 (7%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
+PD I +A FA+ H R G PYI HPVAVA IL + +P + +ALL
Sbjct: 16 TPDECDFIERAYHFAAKAHQGVTR--ASGEPYITHPVAVASILASMK--LDPDALAAALL 71
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKR------CQILHAPHSSHE 193
HD +EDTD T++++ F P V +VE +T + R++ C++L A
Sbjct: 72 HDVLEDTDATYQQLSDNFNPVVAELVEGVTKLDKINFKNREQAQASNICKMLIAMSKDFR 131
Query: 194 AKLVKLADKLHNLRDIERSLP 214
L+KLAD++HN+R ++ P
Sbjct: 132 VMLIKLADRVHNMRTLDSLRP 152
>gi|406672913|ref|ZP_11080138.1| RelA/SpoT family protein [Bergeyella zoohelcum CCUG 30536]
gi|405587457|gb|EKB61185.1| RelA/SpoT family protein [Bergeyella zoohelcum CCUG 30536]
Length = 734
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 14/136 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H QRRK G PYI HP+ VA I+ + LG S I ALLHD +
Sbjct: 34 IRKAFDIALDAHKDQRRK--TGEPYIYHPIEVAKIVANEIGLGATS----IACALLHDVI 87
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSHEAKLVK 198
ED++ T+E+I++ FG +V ++V LT + K+++ ++L LVK
Sbjct: 88 EDSEYTYEDIQKLFGDKVANIVSGLTKISVMNQKNISIQSENYRKLLLTLSEDFRVILVK 147
Query: 199 LADKLHNLRDIERSLP 214
+AD+LHN+R +E P
Sbjct: 148 IADRLHNMRTLESMRP 163
>gi|189439171|ref|YP_001954252.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Bifidobacterium longum DJO10A]
gi|322689387|ref|YP_004209121.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. infantis 157F]
gi|322691353|ref|YP_004220923.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. longum JCM
1217]
gi|189427606|gb|ACD97754.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Bifidobacterium longum DJO10A]
gi|320456209|dbj|BAJ66831.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. longum JCM
1217]
gi|320460723|dbj|BAJ71343.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. infantis 157F]
Length = 774
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 94/191 (49%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 36 HHPDEDLSILDRAYRRAVIQHSAQRRK--SGEPYIIHPLAVSQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 92 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 152 TLVVKLADRVHNAR--------TWRYVKTTSAQKKARETLDVYAPLANRLGMNA-IKTEL 202
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 203 EELSFKVLYPK 213
>gi|53712057|ref|YP_098049.1| GTP pyrophosphokinase [Bacteroides fragilis YCH46]
gi|336408277|ref|ZP_08588771.1| hypothetical protein HMPREF1018_00786 [Bacteroides sp. 2_1_56FAA]
gi|383117020|ref|ZP_09937767.1| RelA/SpoT family protein [Bacteroides sp. 3_2_5]
gi|423258947|ref|ZP_17239870.1| RelA/SpoT family protein [Bacteroides fragilis CL07T00C01]
gi|423264082|ref|ZP_17243085.1| RelA/SpoT family protein [Bacteroides fragilis CL07T12C05]
gi|423269336|ref|ZP_17248308.1| RelA/SpoT family protein [Bacteroides fragilis CL05T00C42]
gi|423273101|ref|ZP_17252048.1| RelA/SpoT family protein [Bacteroides fragilis CL05T12C13]
gi|423282025|ref|ZP_17260910.1| RelA/SpoT family protein [Bacteroides fragilis HMW 615]
gi|52214922|dbj|BAD47515.1| GTP pyrophosphokinase [Bacteroides fragilis YCH46]
gi|251947680|gb|EES87962.1| RelA/SpoT family protein [Bacteroides sp. 3_2_5]
gi|335939577|gb|EGN01451.1| hypothetical protein HMPREF1018_00786 [Bacteroides sp. 2_1_56FAA]
gi|387776527|gb|EIK38627.1| RelA/SpoT family protein [Bacteroides fragilis CL07T00C01]
gi|392701130|gb|EIY94290.1| RelA/SpoT family protein [Bacteroides fragilis CL05T00C42]
gi|392706348|gb|EIY99471.1| RelA/SpoT family protein [Bacteroides fragilis CL07T12C05]
gi|392708133|gb|EIZ01241.1| RelA/SpoT family protein [Bacteroides fragilis CL05T12C13]
gi|404582512|gb|EKA87206.1| RelA/SpoT family protein [Bacteroides fragilis HMW 615]
Length = 747
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVAKIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FG ++ +V+ LT +R Q +L L+
Sbjct: 92 EDTDYTVEDIENIFGAKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|384135926|ref|YP_005518640.1| (p)ppGpp synthetase I SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339290011|gb|AEJ44121.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 725
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 25/192 (13%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP+ I + +A +FA+ H Q R G PYI HP+AVA+IL L + I++ LL
Sbjct: 22 SPEEIAAVRRAYEFAAKAHQGQTR--LSGEPYISHPLAVAYILADLR--LDAAAIMAGLL 77
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHE 193
HD VEDT + I + FG V ++V+ +T K + D R+ Q + A
Sbjct: 78 HDVVEDTSVSDSTIVQTFGAEVATLVDGVTKLKRIKFDSREEQQAENLRKMFMAMARDIR 137
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLR------GTNAPIEAEL 247
++KLAD+LHN+R ++ P T+ RK AR+ ++ G N I+ EL
Sbjct: 138 VLIIKLADRLHNMRTLKYQSPE--TQVRK------ARETLEIFAPLAHRLGINT-IKWEL 188
Query: 248 DALFAKYCTPRE 259
+ L +Y P++
Sbjct: 189 EDLSLRYLNPQQ 200
>gi|336113211|ref|YP_004567978.1| metal dependent phosphohydrolase [Bacillus coagulans 2-6]
gi|335366641|gb|AEH52592.1| metal dependent phosphohydrolase [Bacillus coagulans 2-6]
Length = 180
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 73/131 (55%), Gaps = 4/131 (3%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA +FA+ H Q RK + PYI HP AVA +L G V+ +ALLHDTVEDT
Sbjct: 4 VEKAIEFAAKAHEGQYRKASD-LPYIAHPYAVAMMLLKEG--CRKEVVTAALLHDTVEDT 60
Query: 147 DTTFEEIEREFGPRVRSVVEELTD-NKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
T EEI+ EFG V +V T+ K++ +ERK+ I + E ++ ADKLHN
Sbjct: 61 AVTNEEIKDEFGSDVARIVAACTEPPKNVRWEERKQHTIERLKTAEEEICMIICADKLHN 120
Query: 206 LRDIERSLPVN 216
L+ I L N
Sbjct: 121 LKTIHEGLRKN 131
>gi|146341381|ref|YP_001206429.1| GTP pyrophosphokinase [Bradyrhizobium sp. ORS 278]
gi|146194187|emb|CAL78208.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
ORS 278]
Length = 763
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 11/139 (7%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++PD +++ +A +A H Q R G PY HP+ VA ILT L K+ + I++A
Sbjct: 49 YNPDTNEDLLNRAYVYAMKAHGSQTRA--SGDPYFTHPLEVAAILTDL-KLDD-ATIVAA 104
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
LLHDT+EDT+ T EI+R FGP + ++VE LT K + R+ Q +L A
Sbjct: 105 LLHDTIEDTEATRAEIDRFFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADD 164
Query: 192 HEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 165 VRVLLVKLADRLHNMRTLD 183
>gi|265765392|ref|ZP_06093667.1| GTP pyrophosphokinase [Bacteroides sp. 2_1_16]
gi|375357097|ref|YP_005109869.1| putative RelA/SpoT GTP pyrophosphokinase [Bacteroides fragilis
638R]
gi|423248731|ref|ZP_17229747.1| RelA/SpoT family protein [Bacteroides fragilis CL03T00C08]
gi|423253680|ref|ZP_17234611.1| RelA/SpoT family protein [Bacteroides fragilis CL03T12C07]
gi|263254776|gb|EEZ26210.1| GTP pyrophosphokinase [Bacteroides sp. 2_1_16]
gi|301161778|emb|CBW21318.1| putative RelA/SpoT GTP pyrophosphokinase [Bacteroides fragilis
638R]
gi|392655309|gb|EIY48952.1| RelA/SpoT family protein [Bacteroides fragilis CL03T12C07]
gi|392657672|gb|EIY51303.1| RelA/SpoT family protein [Bacteroides fragilis CL03T00C08]
Length = 747
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVAKIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FG ++ +V+ LT +R Q +L L+
Sbjct: 92 EDTDYTVEDIENIFGAKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|254474577|ref|ZP_05087963.1| RelA/SpoT family protein [Ruegeria sp. R11]
gi|214028820|gb|EEB69655.1| RelA/SpoT family protein [Ruegeria sp. R11]
Length = 710
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 91/185 (49%), Gaps = 18/185 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I A DF H Q R G PY HPVAVA ILT + + II+ALLHDT+EDT
Sbjct: 23 IADAYDFGEQMHEGQFRH--SGEPYFTHPVAVAAILTE--QRLDDATIITALLHDTIEDT 78
Query: 147 DTTFEEIEREFGPRVRSVVEELTD--NKHMTRDERKRCQ----ILHAPHSSHEAKLVKLA 200
+++EI FG V +V+ +T N ++ E K+ + + A LVKLA
Sbjct: 79 KASYDEIASRFGGEVAMLVDGVTKLTNLQLSSRETKQAENFRKLFMAMSKDLRVILVKLA 138
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAP--IEAELDALFAKYCTPR 258
D+LHN+R I+ P +++ Q D+ L G + EL+ L + P
Sbjct: 139 DRLHNMRTIKAMRP-----DKQAQKARETMDIYAPLAGRMGMQWMREELEDLAFRVLNP- 192
Query: 259 EGREN 263
EGR++
Sbjct: 193 EGRQS 197
>gi|154503164|ref|ZP_02040224.1| hypothetical protein RUMGNA_00988 [Ruminococcus gnavus ATCC 29149]
gi|336433022|ref|ZP_08612852.1| hypothetical protein HMPREF0991_01971 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153796158|gb|EDN78578.1| HD domain protein [Ruminococcus gnavus ATCC 29149]
gi|336017692|gb|EGN47450.1| hypothetical protein HMPREF0991_01971 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 199
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 75/131 (57%), Gaps = 8/131 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGT--PYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVE 144
+ +A FA H Q RK GT PYI HP+ VA I++ + + +I +ALLHDT+E
Sbjct: 2 VEEARSFAEKAHEGQFRK---GTKRPYIVHPLEVAKIVSTM--TDDEEIISAALLHDTLE 56
Query: 145 DT-DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
D T E+I+ FG RV +V + +++K T ERK I H + +++ LADKL
Sbjct: 57 DCRQVTKEQIKEAFGERVLEMVRQESEDKSKTWVERKSTTIRHLKTAPRAVQMIALADKL 116
Query: 204 HNLRDIERSLP 214
N+RDI+R P
Sbjct: 117 SNIRDIDREYP 127
>gi|23465997|ref|NP_696600.1| RelA [Bifidobacterium longum NCC2705]
gi|23326714|gb|AAN25236.1| RelA [Bifidobacterium longum NCC2705]
Length = 781
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 94/191 (49%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 43 HHPDEDLSILDRAYRRAVIQHSAQRRK--SGEPYIIHPLAVSQILADLGM--GPIVVAAG 98
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 99 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 158
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 159 TLVVKLADRVHNAR--------TWRYVKTTSAQKKARETLDVYAPLANRLGMNA-IKTEL 209
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 210 EELSFKVLYPK 220
>gi|320449341|ref|YP_004201437.1| GTP pyrophosphokinase [Thermus scotoductus SA-01]
gi|320149510|gb|ADW20888.1| GTP pyrophosphokinase [Thermus scotoductus SA-01]
Length = 667
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 71/134 (52%), Gaps = 13/134 (9%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+ +A FA H Q RK G PYI HPVAVA IL L ++ +++ LLHDT+ED
Sbjct: 25 KVREAYRFAEEAHRGQLRKS--GEPYITHPVAVAEILASLRMDAD--TVMAGLLHDTLED 80
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTR-----DERKRC----QILHAPHSSHEAKL 196
EE+ER FGP VR +VE T + + E KR Q+ A +
Sbjct: 81 CGVAPEELERRFGPAVRRLVEGETKVSKLYKLANLEGEEKRAEDLRQMFIAMAEDVRIII 140
Query: 197 VKLADKLHNLRDIE 210
VKLAD+LHNLR +E
Sbjct: 141 VKLADRLHNLRTLE 154
>gi|163756793|ref|ZP_02163902.1| GTP diphosphokinase (guanosine 3',5'-polyphosphate synthase)
[Kordia algicida OT-1]
gi|161323182|gb|EDP94522.1| GTP diphosphokinase (guanosine 3',5'-polyphosphate synthase)
[Kordia algicida OT-1]
Length = 737
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 77/135 (57%), Gaps = 12/135 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVED 145
I KA D A H QRRK G YI HP+AVA I+ + +G + I SALLHD VED
Sbjct: 36 IRKAFDVAVDAHKDQRRKS--GEAYIFHPIAVAKIVASEIG--MDATSIASALLHDVVED 91
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKL 199
T+ T E+IER FG V +V+ LT H+ +D+ Q +L + ++K+
Sbjct: 92 TEYTLEDIERMFGITVAKIVDGLTKISHLKKDKDVSMQAENFRKMLLTINDDVRVIIIKI 151
Query: 200 ADKLHNLRDIERSLP 214
AD+LHN++ +E S+P
Sbjct: 152 ADRLHNMQTME-SMP 165
>gi|425470826|ref|ZP_18849686.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9701]
gi|389883416|emb|CCI36194.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9701]
Length = 765
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
+PD+ + I +A +FA H Q RK G PYI HP+AVA +L LG + +I +
Sbjct: 43 QNPDSDL-ICRAFNFAHKLHEGQYRKS--GEPYIAHPIAVAGLLRDLG--GDGAMIAAGF 97
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHD VEDT+ T EEIE FG VR++VE +T + Q + A
Sbjct: 98 LHDVVEDTEVTPEEIEARFGVEVRNLVEAVTKLSKFNFSSKTERQAENFRRMFLAMAQDI 157
Query: 193 EAKLVKLADKLHNLRDIE 210
+VKLAD+LHN++ +E
Sbjct: 158 RVIVVKLADRLHNMQTLE 175
>gi|317482439|ref|ZP_07941456.1| RelA/SpoT family protein [Bifidobacterium sp. 12_1_47BFAA]
gi|316916099|gb|EFV37504.1| RelA/SpoT family protein [Bifidobacterium sp. 12_1_47BFAA]
Length = 774
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 94/191 (49%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 36 HHPDEDLSILDRAYRRAVIQHSAQRRK--SGEPYIIHPLAVSQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 92 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 152 TLVVKLADRVHNAR--------TWRYVKTTSAQKKARETLDVYAPLANRLGMNA-IKTEL 202
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 203 EELSFKVLYPK 213
>gi|258512062|ref|YP_003185496.1| (p)ppGpp synthetase I SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478788|gb|ACV59107.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 725
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 25/192 (13%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP+ I + +A +FA+ H Q R G PYI HP+AVA+IL L + I++ LL
Sbjct: 22 SPEDIAAVRRAYEFAAKAHQGQMR--LSGEPYISHPLAVAYILADLR--LDAAAIMAGLL 77
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHE 193
HD VEDT + I + FG V ++V+ +T K + D R+ Q + A
Sbjct: 78 HDVVEDTSVSDSAIVQAFGAEVATLVDGVTKLKRIKFDSREEQQAENLRKMFMAMARDIR 137
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLR------GTNAPIEAEL 247
++KLAD+LHN+R ++ P T+ RK AR+ ++ G N I+ EL
Sbjct: 138 VLIIKLADRLHNMRTLKYQSPE--TQVRK------ARETLEIFAPLAHRLGINT-IKWEL 188
Query: 248 DALFAKYCTPRE 259
+ L +Y P++
Sbjct: 189 EDLSLRYLNPQQ 200
>gi|218288848|ref|ZP_03493099.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
LAA1]
gi|218240937|gb|EED08114.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
LAA1]
Length = 725
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 97/192 (50%), Gaps = 25/192 (13%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP+ I + +A +FA+ H Q R G PYI HP+AVA+IL L + I++ LL
Sbjct: 22 SPEDIAAVRRAYEFAAKAHQGQTR--LSGEPYISHPLAVAYILADLR--LDAAAIMAGLL 77
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHE 193
HD VEDT + I + FG V ++V+ +T K + D R+ Q + A
Sbjct: 78 HDVVEDTSVSDSAIVQTFGAEVATLVDGVTKLKRIKFDSREEQQAENLRKMFMAMARDIR 137
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLR------GTNAPIEAEL 247
++KLAD+LHN+R ++ P T+ RK AR+ ++ G N I+ EL
Sbjct: 138 VLIIKLADRLHNMRTLKYQSPE--TQVRK------ARETLEIFAPLAHRLGINT-IKWEL 188
Query: 248 DALFAKYCTPRE 259
+ L +Y P++
Sbjct: 189 EDLSLRYLNPQQ 200
>gi|443315184|ref|ZP_21044689.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 6406]
gi|442785224|gb|ELR95059.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 6406]
Length = 762
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 74/134 (55%), Gaps = 10/134 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A +FA H Q R G PYI HP+AVA +L LG + +I + LHD VEDT
Sbjct: 47 VCRAFEFAYALHQGQMRAS--GEPYICHPIAVASLLRDLG--GDSAMIAAGFLHDIVEDT 102
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
D T EEIE +FG VR +VE +L+ ++ ER+ ++ A +VKLA
Sbjct: 103 DVTPEEIEAQFGGEVRRLVEGVTKLSKFNFQSKTERQAENFRRMFLAMAQDARVIVVKLA 162
Query: 201 DKLHNLRDIERSLP 214
D+LHN+R +E P
Sbjct: 163 DRLHNMRTLEHLKP 176
>gi|384201351|ref|YP_005587098.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. longum KACC
91563]
gi|338754358|gb|AEI97347.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. longum KACC
91563]
Length = 774
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 94/191 (49%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 36 HHPDEDLSILDRAYRRAVIQHSAQRRK--SGEPYIIHPLAVSQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 92 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 152 TLVVKLADRVHNAR--------TWRYVKTTSAQKKARETLDVYAPLANRLGMNA-IKTEL 202
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 203 EELSFKVLYPK 213
>gi|239621288|ref|ZP_04664319.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|239515749|gb|EEQ55616.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|291516765|emb|CBK70381.1| (p)ppGpp synthetase, RelA/SpoT family [Bifidobacterium longum
subsp. longum F8]
Length = 784
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 94/191 (49%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 46 HHPDEDLSILDRAYRRAVIQHSAQRRK--SGEPYIIHPLAVSQILADLGM--GPIVVAAG 101
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 102 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 161
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 162 TLVVKLADRVHNAR--------TWRYVKTTSAQKKARETLDVYAPLANRLGMNA-IKTEL 212
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 213 EELSFKVLYPK 223
>gi|332670533|ref|YP_004453541.1| (p)ppGpp synthetase I SpoT/RelA [Cellulomonas fimi ATCC 484]
gi|332339571|gb|AEE46154.1| (p)ppGpp synthetase I, SpoT/RelA [Cellulomonas fimi ATCC 484]
Length = 777
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 87/171 (50%), Gaps = 25/171 (14%)
Query: 45 MVRKGK---PEAPAVEVHVHEARLGEAPDTGDSDSGMHSPDAIMNIV-KATDFASHKHHF 100
+VR G+ P PA+E + AR + P A + +V +A A H
Sbjct: 31 LVRFGQRSGPAFPALEPVLQAAR-------------TNHPKADLAVVEQAYVVAEKAHRG 77
Query: 101 QRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPR 160
Q RK G PYI HPVAVA IL LG P + +ALLHDTVEDT+ + +++ REFGP
Sbjct: 78 QLRK--SGDPYITHPVAVATILAELGM--TPSTLAAALLHDTVEDTEYSLDQLRREFGPE 133
Query: 161 VRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLHNLR 207
V +V+ +T +T + + + + A ++KLAD+LHN R
Sbjct: 134 VAMLVDGVTKLDKVTYGDAAQAETVRKMVVAMSRDIRVLVIKLADRLHNAR 184
>gi|294631822|ref|ZP_06710382.1| GTP diphosphokinase [Streptomyces sp. e14]
gi|292835155|gb|EFF93504.1| GTP diphosphokinase [Streptomyces sp. e14]
Length = 717
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 79 HSPDAIMN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PDA + + +A A H Q RK G PYI HP+AV IL LG + + ++
Sbjct: 32 HFPDADLEPLRRAYVLAESSHRGQMRK--SGEPYITHPLAVTLILAELG--AETTTLTAS 87
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSH 192
LLHDTVEDTD T +++ EFG VR +V+ +T D E R ++L A S
Sbjct: 88 LLHDTVEDTDVTLDQVGEEFGAEVRYLVDGVTKLEKVDYGAAAEPETFR-KMLVATGSDV 146
Query: 193 EAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
+KLAD+LHN+R + P E++ + RDV+
Sbjct: 147 RVMSIKLADRLHNMRTLGVMRP-----EKQARIAKVTRDVL 182
>gi|204789670|gb|ACI02046.1| hypothetical protein [uncultured bacterium]
Length = 742
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
H D I I KA + AS H Q RK G PYI HP+ VA IL L + I++ L
Sbjct: 22 HPSDDITLIEKAYNIASKAHAKQLRK--SGEPYIVHPLCVAIILADLQ--LDKESIVAGL 77
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSS 191
LHD VEDT T E+IEREFGP V +V+ +T +N + ++ A
Sbjct: 78 LHDVVEDTVMTDEDIEREFGPDVALIVDGVTKLEKIKYNNDKLEYQAENLRRMFIAMAKD 137
Query: 192 HEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDA 249
+VKLAD+LHN+R + E ++ + D+ L R + ++ ELD
Sbjct: 138 IRVIMVKLADRLHNMRTLSHQ-----PEAKQKEIAKETMDIYAPLAQRLGISKVKVELDD 192
Query: 250 LFAKYCTPREGRE 262
L KY P R+
Sbjct: 193 LSLKYLEPEVYRD 205
>gi|423280065|ref|ZP_17258978.1| RelA/SpoT family protein [Bacteroides fragilis HMW 610]
gi|404584401|gb|EKA89066.1| RelA/SpoT family protein [Bacteroides fragilis HMW 610]
Length = 748
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVAKIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FG ++ +V+ LT +R Q +L L+
Sbjct: 92 EDTDYTVEDIENIFGAKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|219683441|ref|YP_002469824.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis
AD011]
gi|219621091|gb|ACL29248.1| probable GTP pyrophosphokinase [Bifidobacterium animalis subsp.
lactis AD011]
Length = 777
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M I+ +A A +H QRR+ G PYI HP+AVA IL LG P V+ +
Sbjct: 36 HHPDEDMEILSRAYTRAVIQHAEQRRR--SGEPYIIHPLAVAQILADLGM--GPSVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T +E EFG V +V+ +T M + + + + A
Sbjct: 92 LLHDTVEDTDYTLDECRAEFGDTVAGLVDGVTKLTKMDYGDSAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD++HN R
Sbjct: 152 VLVVKLADRVHNAR 165
>gi|209884971|ref|YP_002288828.1| GTP pyrophosphokinase [Oligotropha carboxidovorans OM5]
gi|209873167|gb|ACI92963.1| GTP pyrophosphokinase [Oligotropha carboxidovorans OM5]
Length = 754
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q+R G PY HP+ VA ILT L K+ + I++ALLHDT+EDT++
Sbjct: 59 RAYVYAMKAHGEQKRA--SGDPYFSHPLEVAAILTDL-KLDD-ATIVAALLHDTIEDTES 114
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EI++ FG ++ ++VE LT K + R+ Q +L A S LVKLAD+
Sbjct: 115 TRAEIDQLFGTKIGALVEGLTKLKRLELVSREAKQAENLRKLLLAISSDVRVLLVKLADR 174
Query: 203 LHNLRDIE 210
LHN+R +E
Sbjct: 175 LHNMRTME 182
>gi|425454881|ref|ZP_18834606.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9807]
gi|389804320|emb|CCI16779.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9807]
Length = 765
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
+PD+ + I +A +FA H Q RK G PYI HP+AVA +L LG + +I +
Sbjct: 43 QNPDSDL-ICRAFNFAYKLHEGQYRKS--GEPYIAHPIAVAGLLRDLG--GDGAMIAAGF 97
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHD VEDT+ T EEIE FG VR++VE +T + Q + A
Sbjct: 98 LHDVVEDTEVTPEEIEDRFGVEVRNLVEAVTKLSKFNFSSKTERQAENFRRMFLAMAQDI 157
Query: 193 EAKLVKLADKLHNLRDIE 210
+VKLAD+LHN++ +E
Sbjct: 158 RVIVVKLADRLHNMQTLE 175
>gi|337741395|ref|YP_004633123.1| GTP pyrophosphokinase RelA [Oligotropha carboxidovorans OM5]
gi|386030411|ref|YP_005951186.1| GTP pyrophosphokinase RelA [Oligotropha carboxidovorans OM4]
gi|336095479|gb|AEI03305.1| GTP pyrophosphokinase RelA [Oligotropha carboxidovorans OM4]
gi|336099059|gb|AEI06882.1| GTP pyrophosphokinase RelA [Oligotropha carboxidovorans OM5]
Length = 720
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q+R G PY HP+ VA ILT L K+ + I++ALLHDT+EDT++
Sbjct: 25 RAYVYAMKAHGEQKRA--SGDPYFSHPLEVAAILTDL-KLDD-ATIVAALLHDTIEDTES 80
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EI++ FG ++ ++VE LT K + R+ Q +L A S LVKLAD+
Sbjct: 81 TRAEIDQLFGTKIGALVEGLTKLKRLELVSREAKQAENLRKLLLAISSDVRVLLVKLADR 140
Query: 203 LHNLRDIE 210
LHN+R +E
Sbjct: 141 LHNMRTME 148
>gi|424661878|ref|ZP_18098915.1| RelA/SpoT family protein [Bacteroides fragilis HMW 616]
gi|404578189|gb|EKA82924.1| RelA/SpoT family protein [Bacteroides fragilis HMW 616]
Length = 748
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVAKIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FG ++ +V+ LT +R Q +L L+
Sbjct: 92 EDTDYTVEDIENIFGAKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|331085583|ref|ZP_08334667.1| hypothetical protein HMPREF0987_00970 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330407470|gb|EGG86972.1| hypothetical protein HMPREF0987_00970 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 179
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 76/131 (58%), Gaps = 8/131 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGT--PYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVE 144
I +A FA+ H Q RK GT PYI HP+ V I+ + + VI +A+LHDT+E
Sbjct: 2 IQRAIAFATKAHDGQLRK---GTMRPYILHPLEVGVIVARM--TEDEEVISAAILHDTIE 56
Query: 145 DTD-TTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
D + T + IE+ F RV +V++ +++K T ERK I H + E +++ LADKL
Sbjct: 57 DCEGVTAKMIEQMFSNRVAELVQKESEDKSKTWMERKGATIQHLKVAEREVQMIGLADKL 116
Query: 204 HNLRDIERSLP 214
N+RDI+R P
Sbjct: 117 SNMRDIDRDYP 127
>gi|325963414|ref|YP_004241320.1| glutamate--cysteine ligase [Arthrobacter phenanthrenivorans Sphe3]
gi|323469501|gb|ADX73186.1| putative glutamate--cysteine ligase/putative amino acid ligase
[Arthrobacter phenanthrenivorans Sphe3]
Length = 797
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A D A H Q+RK G PYI HPVAVA IL LG + + +ALLHDTVEDT
Sbjct: 91 IQRAFDVAEQSHRGQKRK--SGDPYITHPVAVATILAELGL--SGTTLAAALLHDTVEDT 146
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADK 202
T +++R+FGP V +V+ +T ++ E + + + A ++KLAD+
Sbjct: 147 PYTLADLKRDFGPEVAMLVDGVTKLDKVSFGEAAQSETVRKMVVAMAKDIRVLMIKLADR 206
Query: 203 LHNLR 207
LHN R
Sbjct: 207 LHNAR 211
>gi|381191174|ref|ZP_09898685.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
sp. RL]
gi|380450963|gb|EIA38576.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
sp. RL]
Length = 727
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 72/139 (51%), Gaps = 13/139 (9%)
Query: 81 PDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLH 140
P+ + +A FA H Q R+ G PYI HPVAVA IL L ++ V + LLH
Sbjct: 21 PEERAKVREAYRFAEEAHRGQLRRS--GEPYITHPVAVAEILAGLQMDADTVA--AGLLH 76
Query: 141 DTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTR-----DERKRC----QILHAPHSS 191
DT+ED EE+ER FGP VR +VE T + + E +R Q+ A
Sbjct: 77 DTLEDCGVAPEELERRFGPTVRRIVEGETKVSKLYKLANLEGEERRAEDLRQMFIAMAED 136
Query: 192 HEAKLVKLADKLHNLRDIE 210
+VKLAD+LHNLR +E
Sbjct: 137 VRIIIVKLADRLHNLRTLE 155
>gi|227496216|ref|ZP_03926515.1| GTP diphosphokinase [Actinomyces urogenitalis DSM 15434]
gi|226834247|gb|EEH66630.1| GTP diphosphokinase [Actinomyces urogenitalis DSM 15434]
Length = 775
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
IV+A + A H QRRK G PYI HPVAVA IL LG P + +ALLHDTVEDT
Sbjct: 58 IVRAYEVAQKAHEGQRRK--SGEPYITHPVAVATILGELGM--TPQTLAAALLHDTVEDT 113
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADK 202
D T E + +FG + +V+ +T + E + + + A ++KL D+
Sbjct: 114 DYTLERLRADFGDEIALLVDGVTKLDKLQYGEAAQAETVRKMIIAMSKDIRVLVIKLGDR 173
Query: 203 LHNLR 207
LHN R
Sbjct: 174 LHNAR 178
>gi|384192512|ref|YP_005578259.1| GTP diphosphokinase [Bifidobacterium animalis subsp. lactis CNCM
I-2494]
gi|340365249|gb|AEK30540.1| GTP diphosphokinase [Bifidobacterium animalis subsp. lactis CNCM
I-2494]
Length = 780
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M I+ +A A +H QRR+ G PYI HP+AVA IL LG P V+ +
Sbjct: 39 HHPDEDMEILSRAYTRAVIQHAEQRRR--SGEPYIIHPLAVAQILADLGM--GPSVVAAG 94
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T +E EFG V +V+ +T M + + + + A
Sbjct: 95 LLHDTVEDTDYTLDECRAEFGDTVAGLVDGVTKLTKMDYGDSAQAETIRKMVVAMSRDVR 154
Query: 194 AKLVKLADKLHNLR 207
+VKLAD++HN R
Sbjct: 155 VLVVKLADRVHNAR 168
>gi|296454301|ref|YP_003661444.1| (p)ppGpp synthetase I [Bifidobacterium longum subsp. longum JDM301]
gi|296183732|gb|ADH00614.1| (p)ppGpp synthetase I, SpoT/RelA [Bifidobacterium longum subsp.
longum JDM301]
Length = 781
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 94/191 (49%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 43 HHPDEDLSILDRAYRRAVIQHSAQRRK--SGEPYIIHPLAVSQILADLGM--GPIVVAAG 98
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 99 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 158
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 159 TLVVKLADRVHNAR--------TWRYVKTTSAQRKARETLDVYAPLANRLGMNA-IKTEL 209
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 210 EELSFKVLYPK 220
>gi|313145283|ref|ZP_07807476.1| GTP pyrophosphokinase [Bacteroides fragilis 3_1_12]
gi|313134050|gb|EFR51410.1| GTP pyrophosphokinase [Bacteroides fragilis 3_1_12]
Length = 748
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 73/137 (53%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ + LG S I +ALLHD V
Sbjct: 38 ITKAFNFANQAHKGIKRRS--GEPYIMHPIAVAKIVCNEIGLGSTS----ICAALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FG ++ +V+ LT +R Q +L L+
Sbjct: 92 EDTDYTVEDIENIFGAKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KIADRLHNMRTLGSMLP 168
>gi|241191115|ref|YP_002968509.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241196521|ref|YP_002970076.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|384194107|ref|YP_005579853.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis BLC1]
gi|384195673|ref|YP_005581418.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis V9]
gi|387820981|ref|YP_006301024.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Bifidobacterium
animalis subsp. lactis B420]
gi|387822659|ref|YP_006302608.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Bifidobacterium
animalis subsp. lactis Bi-07]
gi|423679641|ref|ZP_17654517.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis BS
01]
gi|240249507|gb|ACS46447.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240251075|gb|ACS48014.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|295794104|gb|ADG33639.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis V9]
gi|345282966|gb|AEN76820.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis BLC1]
gi|366041285|gb|EHN17789.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis BS
01]
gi|386653682|gb|AFJ16812.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Bifidobacterium
animalis subsp. lactis B420]
gi|386655267|gb|AFJ18396.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Bifidobacterium
animalis subsp. lactis Bi-07]
Length = 777
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M I+ +A A +H QRR+ G PYI HP+AVA IL LG P V+ +
Sbjct: 36 HHPDEDMEILSRAYTRAVIQHAEQRRR--SGEPYIIHPLAVAQILADLGM--GPSVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T +E EFG V +V+ +T M + + + + A
Sbjct: 92 LLHDTVEDTDYTLDECRAEFGDTVAGLVDGVTKLTKMDYGDSAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD++HN R
Sbjct: 152 VLVVKLADRVHNAR 165
>gi|284035337|ref|YP_003385267.1| metal dependent phosphohydrolase [Spirosoma linguale DSM 74]
gi|283814630|gb|ADB36468.1| metal dependent phosphohydrolase [Spirosoma linguale DSM 74]
Length = 182
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 88/172 (51%), Gaps = 14/172 (8%)
Query: 93 FASHKHHFQRRKDPEGT--PYIEHPVAVA-HILTHLGKVSN---PVVIISALLHDTVEDT 146
FA+ KH + P GT PY+ H VA IL + + I ALLHDT+EDT
Sbjct: 13 FAARKHGETSQIIP-GTNLPYVVHLSNVAMEILMAAQETKDFDLKYAIQVALLHDTLEDT 71
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
+TTFEE++ F V V+ LT NK++ ++ER + S E VKLAD++ NL
Sbjct: 72 NTTFEELQEIFSSEVAQAVQALTKNKNVPKEERMLDSLTRIKKLSKEVWAVKLADRITNL 131
Query: 207 RDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDAL---FAKYC 255
++ P +W+ E+ Y A + Q L+G N+ +E L +A YC
Sbjct: 132 ----QAPPAHWSSEKIQAYQTQALQIAQELKGGNSYLENRLARKINEYAAYC 179
>gi|160892955|ref|ZP_02073744.1| hypothetical protein CLOL250_00487 [Clostridium sp. L2-50]
gi|156865514|gb|EDO58945.1| HD domain protein [Clostridium sp. L2-50]
Length = 223
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 90 ATDFASHKHHFQRRKDPEG-TPYI-EHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTD 147
A FA H Q R +G PY EH + V HIL V + V+++ALLHDTVEDTD
Sbjct: 40 AMAFAKRCHQGQTRLGRDGKVPYYDEHILGVYHILRDECHVEDETVLVAALLHDTVEDTD 99
Query: 148 TTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLR 207
TFE+IE+ FG +R V L+ + T + + HAP + ++KLAD+LHNLR
Sbjct: 100 CTFEDIEQIFGTDIRDHVYLLSKLEGETFSDYSKRLFDHAP---AQVVMIKLADRLHNLR 156
Query: 208 DIERSLPVNWTEERKTQYF 226
I W + + Q +
Sbjct: 157 TILFVSNRKWIQRKVNQTY 175
>gi|422301714|ref|ZP_16389079.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9806]
gi|389789226|emb|CCI14734.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9806]
Length = 765
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 74/138 (53%), Gaps = 11/138 (7%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
+PD+ + I +A +FA H Q RK G PYI HP+AVA +L LG + +I +
Sbjct: 43 QNPDSDL-ICRAFNFAHKLHEGQYRKS--GEPYIAHPIAVAGLLRDLG--GDGAMIAAGF 97
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHD VEDT+ T EEIE FG VR++VE +T + Q + A
Sbjct: 98 LHDVVEDTEVTPEEIEARFGVEVRNLVEAVTKLSKFNFSSKTERQAENFRRMFLAMAQDI 157
Query: 193 EAKLVKLADKLHNLRDIE 210
+VKLAD+LHN++ +E
Sbjct: 158 RVIVVKLADRLHNMQTLE 175
>gi|328954063|ref|YP_004371397.1| (p)ppGpp synthetase I SpoT/RelA [Desulfobacca acetoxidans DSM
11109]
gi|328454387|gb|AEB10216.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfobacca acetoxidans DSM
11109]
Length = 717
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 95/189 (50%), Gaps = 20/189 (10%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P+A ++++ KA F++ H Q R G PY+ HP+ VA++L +G +PV +
Sbjct: 17 HHPEADVSLIQKAYIFSARSHEGQTRLS--GQPYLSHPLEVAYLLAQMG--LDPVSVACG 72
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRD-------ERKRCQILHAPHS 190
LLHDTVEDT+T+ ++++ FG V ++ +T ++ D E R IL H
Sbjct: 73 LLHDTVEDTNTSLDDLDEIFGEEVTDIINGVTKISQISFDKKIDQQAEYIRKMILAMAHD 132
Query: 191 SHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRG--TNAPIEAELD 248
LVKLAD++HN+R + P E + + D+ L G I+AEL+
Sbjct: 133 IR-VILVKLADRVHNMRTLGYMKP-----ESQKRISQETLDIFAPLAGRLGMGRIKAELE 186
Query: 249 ALFAKYCTP 257
L Y P
Sbjct: 187 DLAFYYLEP 195
>gi|436837548|ref|YP_007322764.1| (p)ppGpp synthetase I, SpoT/RelA [Fibrella aestuarina BUZ 2]
gi|384068961|emb|CCH02171.1| (p)ppGpp synthetase I, SpoT/RelA [Fibrella aestuarina BUZ 2]
Length = 752
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA + ++ H RR+ G PYI HP+AVA I LG S I++ALLHD V
Sbjct: 41 IKKAFNTSAEAHKNMRRR--SGEPYIYHPLAVAQIAVEEIGLGTTS----IVAALLHDVV 94
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHM-----TRDERKRCQILHAPHSSHEAKLVK 198
EDTDTT +IER FG +V +++ LT + ++ ++L L+K
Sbjct: 95 EDTDTTIADIERAFGEKVARIIDGLTKISGIFEYGSSQQAENFRKMLLTLSDDVRVILIK 154
Query: 199 LADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCTP 257
LAD+LHN+R ++ S+P + + ++ + L G NA I++EL+ L+ KY P
Sbjct: 155 LADRLHNMRTLD-SMPRDKQLKIASETIYIYAPLAHRL-GLNA-IKSELEDLYLKYVEP 210
>gi|347751086|ref|YP_004858651.1| metal dependent phosphohydrolase [Bacillus coagulans 36D1]
gi|347583604|gb|AEO99870.1| metal dependent phosphohydrolase [Bacillus coagulans 36D1]
Length = 182
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +FA+ H Q RK + PYI HP AVA +L G V+ +ALLHDTVEDT
Sbjct: 6 KAIEFAAKAHEGQYRKASD-LPYIVHPYAVAMMLLKEG--CRKEVVAAALLHDTVEDTAV 62
Query: 149 TFEEIEREFGPRVRSVVEELTD-NKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLR 207
T EEI+ EFG V +VE T+ K++ +ERK+ I + E ++ ADKLHNL+
Sbjct: 63 TNEEIKAEFGSDVARIVEACTEPPKNVRWEERKQHTIERLKTAEEEICMLICADKLHNLK 122
Query: 208 DIERSL 213
I L
Sbjct: 123 TIHEEL 128
>gi|302877631|ref|YP_003846195.1| (p)ppGpp synthetase I SpoT/RelA [Gallionella capsiferriformans
ES-2]
gi|302580420|gb|ADL54431.1| (p)ppGpp synthetase I, SpoT/RelA [Gallionella capsiferriformans
ES-2]
Length = 702
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 80/146 (54%), Gaps = 14/146 (9%)
Query: 73 DSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSN 130
D SG P+ + +I A +F+ H Q R+ G PY+ HP+AVA ILT HL S
Sbjct: 9 DEVSGYLKPEDVEHIRAAIEFSRIAHQGQTRQS--GDPYVTHPIAVARILTPLHLDAQS- 65
Query: 131 PVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------I 184
II+ALLHD VEDT+ T E+I +FG V +V L+ + + + R+ Q +
Sbjct: 66 ---IIAALLHDVVEDTEITTEQIAEQFGKPVAELVGGLSKLEKIHFETREDAQAENFRKM 122
Query: 185 LHAPHSSHEAKLVKLADKLHNLRDIE 210
L A L+KLAD+LHN+R ++
Sbjct: 123 LLAMARDVRVILIKLADRLHNMRTLD 148
>gi|430003007|emb|CCF18790.1| GTP pyrophosphohydrolase/synthetase, RelA/SpoT family [Rhizobium
sp.]
Length = 737
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 93/190 (48%), Gaps = 22/190 (11%)
Query: 79 HSPDA---IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PDA ++N KA +A KH QRR G PYI HP+ VA ILT + + + +
Sbjct: 14 YKPDANEALLN--KAYVYAMQKHGQQRR--ASGDPYISHPLEVAAILTDMHLDESTIAV- 68
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T EI+ FG + +VE LT K + +K Q +L A
Sbjct: 69 -ALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKRLDLVTKKAKQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNA--PIEAEL 247
LVKLAD+LHN+R +E P E++ + D+ L G + EL
Sbjct: 128 DDVRVLLVKLADRLHNMRTLEHMNP-----EKRARISEETMDIYAPLAGRMGMQDVRDEL 182
Query: 248 DALFAKYCTP 257
+ L +Y P
Sbjct: 183 EDLSFRYLNP 192
>gi|419849329|ref|ZP_14372383.1| GTP diphosphokinase [Bifidobacterium longum subsp. longum 35B]
gi|386412312|gb|EIJ26989.1| GTP diphosphokinase [Bifidobacterium longum subsp. longum 35B]
Length = 774
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 94/191 (49%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 36 HHPDEDLSILDRAYRRAVIQHSAQRRK--SGEPYIIHPLAVSQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 92 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 152 TLVVKLADRVHNAR--------TWRYVKTTSAQKKARETLDVYAPLANRLGMNA-IKTEL 202
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 203 EELSFKVLYPK 213
>gi|375292966|ref|YP_005127505.1| hypothetical protein CDB402_1000 [Corynebacterium diphtheriae INCA
402]
gi|371582637|gb|AEX46303.1| hypothetical protein CDB402_1000 [Corynebacterium diphtheriae INCA
402]
Length = 185
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 15/180 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA A++ H Q+RK + PYI HP +V +L + V I+ALLHD +ED
Sbjct: 6 LAKAISIAAYAHRNQKRKATD-IPYICHPYSV--MLIAQSCTCDEDVFIAALLHDVLEDA 62
Query: 147 DTTFEE--IEREFGPRVRSVVEELT-DNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
+ E + +FGPRV S+V+E+T D+ +T ER + H +SH A +V LADK
Sbjct: 63 AEEYSEHDMLNDFGPRVVSIVKEVTKDSSLLTWQERADSYLAHLETASHGALIVCLADKT 122
Query: 204 HNLR----DIERSLPVNWT-----EERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKY 254
HNL D E W ++R+ +++ DV++ G + P A+ L + +
Sbjct: 123 HNLMSMVADYEAVGDALWARFNAGKDRQLWWYSSVWDVLECRLGKDFPGVADYARLLSTF 182
>gi|329121021|ref|ZP_08249652.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
gi|327471183|gb|EGF16637.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
Length = 783
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 10/138 (7%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ + D I I KA + A+ H Q+R G PYI HP++VA+IL+ L N +V +A
Sbjct: 73 ISNQDDINFIKKAFELANKAHSGQKR--ATGEPYIFHPLSVAYILSELELDRNAIV--AA 128
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSS 191
LLHD EDTDTT E+IE +FG + +V+ +L+ K+ +++++ ++ A
Sbjct: 129 LLHDVAEDTDTTLEDIENQFGKEIAFLVDGVTKLSQFKYKNKEDQQLENFQKMFLAMAED 188
Query: 192 HEAKLVKLADKLHNLRDI 209
++KLAD+LHN+R +
Sbjct: 189 VRVVIIKLADRLHNMRTL 206
>gi|383316708|ref|YP_005377550.1| guanosine polyphosphate synthetase/pyrophosphohydrolase [Frateuria
aurantia DSM 6220]
gi|379043812|gb|AFC85868.1| guanosine polyphosphate synthetase/pyrophosphohydrolase [Frateuria
aurantia DSM 6220]
Length = 170
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 81/162 (50%), Gaps = 19/162 (11%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA FA H Q RK G PYI HP++VA I+ + + P +I + LLHD VEDTDT
Sbjct: 6 KALLFAYQAHEGQVRK-YTGDPYITHPISVAAIVKSVAHM--PTMIAACLLHDVVEDTDT 62
Query: 149 TFEEIEREFGPRVRSVVEELTDNK---HMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
++ EFG V +V+ LTD R+ RKR +S EAK +KLAD +HN
Sbjct: 63 RLIDVAVEFGEDVAELVDALTDASTPDDGNREARKRIDREWIAKASPEAKTIKLADLIHN 122
Query: 206 LRDI-------------ERSLPVNWTEERKTQYFNWARDVVQ 234
+ I E+ L + + + +N A D+VQ
Sbjct: 123 TQSIVLHDPKFAKVYMQEKRLLLEVLRDGDAELWNRATDIVQ 164
>gi|384191367|ref|YP_005577115.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis
BB-12]
gi|289178859|gb|ADC86105.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. lactis
BB-12]
Length = 779
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M I+ +A A +H QRR+ G PYI HP+AVA IL LG P V+ +
Sbjct: 39 HHPDEDMEILSRAYTRAVIQHAEQRRR--SGEPYIIHPLAVAQILADLGM--GPSVVAAG 94
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T +E EFG V +V+ +T M + + + + A
Sbjct: 95 LLHDTVEDTDYTLDECRAEFGDTVAGLVDGVTKLTKMDYGDSAQAETIRKMVVAMSRDVR 154
Query: 194 AKLVKLADKLHNLR 207
+VKLAD++HN R
Sbjct: 155 VLVVKLADRVHNAR 168
>gi|312132602|ref|YP_003999941.1| spot [Bifidobacterium longum subsp. longum BBMN68]
gi|311773548|gb|ADQ03036.1| SpoT [Bifidobacterium longum subsp. longum BBMN68]
Length = 774
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 94/191 (49%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 36 HHPDEDLSILDRAYRRAVIQHSAQRRK--SGEPYIIHPLAVSQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 92 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 152 TLVVKLADRVHNAR--------TWRYVKTTSAQKKARETLDVYAPLANRLGMNA-IKTEL 202
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 203 EELSFKVLYPK 213
>gi|406928495|gb|EKD64283.1| hypothetical protein ACD_51C00028G0009 [uncultured bacterium]
Length = 681
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 78/131 (59%), Gaps = 11/131 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I+ A FA H Q+RKD G+ YI HP++ ILTHL KV +++ALLHD EDT
Sbjct: 22 IIDAYKFAEAAHANQKRKD--GSEYIHHPLSTCEILTHL-KVDEDT-LVAALLHDVPEDT 77
Query: 147 DTTFEEIEREFGPRVRSVVEELTD-NKHMTRDERKRCQILHAP----HSSHEAK--LVKL 199
T +EIE +FG V S+VE +T +K +D+ QI HS+ + + L+KL
Sbjct: 78 HITLKEIETKFGKSVSSLVEGITKLSKVHYKDDMAERQIESLKKLFFHSAKDLRIILIKL 137
Query: 200 ADKLHNLRDIE 210
AD+LHN+R +E
Sbjct: 138 ADRLHNMRTLE 148
>gi|402831726|ref|ZP_10880403.1| RelA/SpoT family protein [Capnocytophaga sp. CM59]
gi|402281113|gb|EJU29805.1| RelA/SpoT family protein [Capnocytophaga sp. CM59]
Length = 734
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 74/131 (56%), Gaps = 11/131 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH-LGKVSNPVVIISALLHDTVED 145
I KA D A H QRRK G PYI HP+AVA I+ + +G + V I +ALLHD VED
Sbjct: 37 IRKAFDVAVDAHKEQRRKS--GEPYIFHPIAVAKIVAYNIG--LDAVSIAAALLHDVVED 92
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKL 199
T T EEI R+FG + +V+ LT ++RD Q +L + L+K+
Sbjct: 93 TPITIEEIARDFGDVIAKIVKGLTKISSLSRDTDVSLQAENFRKMLLTLNDDVRVILIKI 152
Query: 200 ADKLHNLRDIE 210
AD+LHN++ ++
Sbjct: 153 ADRLHNMQTMD 163
>gi|419852401|ref|ZP_14375277.1| GTP diphosphokinase [Bifidobacterium longum subsp. longum 2-2B]
gi|386410710|gb|EIJ25484.1| GTP diphosphokinase [Bifidobacterium longum subsp. longum 2-2B]
Length = 774
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 94/191 (49%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 36 HHPDEDLSILDRAYRRAVIQHSAQRRK--SGEPYIIHPLAVSQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 92 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 152 TLVVKLADRVHNAR--------TWRYVKTTSAQKKARETLDVYAPLANRLGMNA-IKTEL 202
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 203 EELSFKVLYPK 213
>gi|48425924|pdb|1VJ7|A Chain A, Crystal Structure Of The Bifunctional Catalytic Fragment
Of Relseq, The RelaSPOT HOMOLOG FROM STREPTOCOCCUS
EQUISIMILIS.
gi|48425925|pdb|1VJ7|B Chain B, Crystal Structure Of The Bifunctional Catalytic Fragment
Of Relseq, The RelaSPOT HOMOLOG FROM STREPTOCOCCUS
EQUISIMILIS
Length = 393
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 17/142 (11%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
M+ DA + KA D+A+ H +Q RK G PYI HP+ VA IL L + V +
Sbjct: 20 MNETDAAF-VKKALDYATAAHFYQVRK--SGEPYIVHPIQVAGILADLH--LDAVTVACG 74
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAP 188
LHD VEDTD T + IE +FG VR +V+ +T + + + RK +L A
Sbjct: 75 FLHDVVEDTDITLDNIEFDFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAM 131
Query: 189 HSSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 132 SKDIRVILVKLADRLHNMRTLK 153
>gi|419855739|ref|ZP_14378489.1| GTP diphosphokinase [Bifidobacterium longum subsp. longum 44B]
gi|386414962|gb|EIJ29503.1| GTP diphosphokinase [Bifidobacterium longum subsp. longum 44B]
Length = 774
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 94/191 (49%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 36 HHPDEDLSILDRAYRRAVIQHSAQRRK--SGEPYIIHPLAVSQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 92 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 152 TLVVKLADRVHNAR--------TWRYVKTTSAQKKARETLDVYAPLANRLGMNA-IKTEL 202
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 203 EELSFKVLYPK 213
>gi|313891996|ref|ZP_07825597.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
gi|313119639|gb|EFR42830.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
Length = 783
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 80/136 (58%), Gaps = 10/136 (7%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
+ D I I KA + A+ H Q+R G PYI HP++VA+IL+ L N I++ALL
Sbjct: 75 NQDDINFIKKAFELANKAHSGQKR--ATGEPYIFHPLSVAYILSELELDRNA--IVAALL 130
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHE 193
HD EDTDTT E+IE +FG + +V+ +L+ K+ +++++ ++ A
Sbjct: 131 HDVAEDTDTTLEDIENQFGKEIAFLVDGVTKLSQFKYKNKEDQQLENFQKMFLAMAEDVR 190
Query: 194 AKLVKLADKLHNLRDI 209
++KLAD+LHN+R +
Sbjct: 191 VVIIKLADRLHNMRTL 206
>gi|312196184|ref|YP_004016245.1| (p)ppGpp synthetase I SpoT/RelA [Frankia sp. EuI1c]
gi|311227520|gb|ADP80375.1| (p)ppGpp synthetase I, SpoT/RelA [Frankia sp. EuI1c]
Length = 901
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
I +++A A HH Q R+ G PYI HP+ VA IL LG + ++++LLHDTV
Sbjct: 77 IGGVIQAYQAAERFHHGQMRR--SGDPYIVHPLGVAEILAELG--VDTTTLVASLLHDTV 132
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKL 199
EDT T E + EFG V ++V+ +T M + + L A + ++K+
Sbjct: 133 EDTGATLEVLADEFGTEVANLVDGVTKLDKMRFGDAAEAETLRKLIVALAKDYRVLVIKI 192
Query: 200 ADKLHNLRDIE 210
AD+LHN+R +E
Sbjct: 193 ADRLHNMRTLE 203
>gi|291436860|ref|ZP_06576250.1| kinase/phosphohydrolase [Streptomyces ghanaensis ATCC 14672]
gi|291339755|gb|EFE66711.1| kinase/phosphohydrolase [Streptomyces ghanaensis ATCC 14672]
Length = 724
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 99/214 (46%), Gaps = 31/214 (14%)
Query: 26 KALPKLESGPKGLPLMYVPMVRKGKPEAPAVEVHVHEARLGEAPDTGDSDSGMHSPDAIM 85
KA P+++ G + P R P+A V H A H PDA +
Sbjct: 29 KARPRIDLRRLGRAALLGPATRDRLPDAIGHVVDAHRA---------------HHPDADL 73
Query: 86 N-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVE 144
+ +A A H Q RK G PYI HP+AV IL LG + + ++LLHDTVE
Sbjct: 74 EPLRRAYLLAESSHRGQMRK--SGEPYITHPLAVTLILAELG--AETTTLTASLLHDTVE 129
Query: 145 DTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
DTD T +++ +FG VR +V+ +T D E R ++L A S +KL
Sbjct: 130 DTDVTLDQVREQFGEEVRYLVDGVTKLEKVDYGAAAEPETFR-KMLVATGSDVRVMSIKL 188
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
AD+LHN+R + P E++ + RDV+
Sbjct: 189 ADRLHNMRTLGVMRP-----EKQERIAKVTRDVL 217
>gi|373461366|ref|ZP_09553108.1| RelA/SpoT family protein [Prevotella maculosa OT 289]
gi|371952920|gb|EHO70753.1| RelA/SpoT family protein [Prevotella maculosa OT 289]
Length = 760
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA H RR G PYI HP+AVA I LG S I SALLHD V
Sbjct: 42 ITKAFNFARQAHKGVRR--LSGEPYIMHPIAVAQIACEEMGLGSTS----ICSALLHDVV 95
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT ER Q +L L+
Sbjct: 96 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGERASAQAENFKKLLLTMSDDIRVILI 155
Query: 198 KLADKLHNLRDIERSLPVN 216
K+ D+LHN+R + S P N
Sbjct: 156 KICDRLHNMRTLA-SQPAN 173
>gi|150025909|ref|YP_001296735.1| GTP diphosphokinase [Flavobacterium psychrophilum JIP02/86]
gi|149772450|emb|CAL43932.1| GTP diphosphokinase [Flavobacterium psychrophilum JIP02/86]
Length = 739
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 11/131 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVS-NPVVIISALLHDTVED 145
I KA D A H QRRK G YI HP+AVA I+ G++ I +AL+HD VED
Sbjct: 36 IRKAFDVAVEAHQDQRRK--SGEAYIFHPIAVAKIVA--GEIGLGATAIAAALMHDVVED 91
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKL 199
TD T +EIE+ F P+V +VE LT + +D Q +L + ++KL
Sbjct: 92 TDITVKEIEQMFNPKVAQLVEGLTKISQVKKDMNISMQAENFRKMLLTLNDDVRVIIIKL 151
Query: 200 ADKLHNLRDIE 210
AD+LHN++ +E
Sbjct: 152 ADRLHNMQTME 162
>gi|427704011|ref|YP_007047233.1| RelA/SpoT family (p)ppGpp synthetase [Cyanobium gracile PCC 6307]
gi|427347179|gb|AFY29892.1| (p)ppGpp synthetase, RelA/SpoT family [Cyanobium gracile PCC 6307]
Length = 773
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 76/143 (53%), Gaps = 12/143 (8%)
Query: 73 DSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPV 132
D+++ P+A+ + A DFA H Q R G PYI HP+AVA +L +G ++
Sbjct: 55 DAEARPVDPEAL--VATAFDFAYQLHDGQFRA--SGEPYIVHPIAVAGLLRDIG--ASAA 108
Query: 133 VIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILH 186
VI + LHD VEDT T +EIE FG VR++VE +T + R Q +
Sbjct: 109 VIAAGFLHDVVEDTQVTPDEIEARFGEEVRALVEGVTKLGGIHFTNRTEAQAENLRRMFL 168
Query: 187 APHSSHEAKLVKLADKLHNLRDI 209
A S LVKLAD+LHN+R +
Sbjct: 169 AMASDIRVVLVKLADRLHNMRTL 191
>gi|419847970|ref|ZP_14371103.1| GTP diphosphokinase [Bifidobacterium longum subsp. longum 1-6B]
gi|386409144|gb|EIJ24015.1| GTP diphosphokinase [Bifidobacterium longum subsp. longum 1-6B]
Length = 774
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 94/191 (49%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 36 HHPDEDLSILDRAYRRAVIQHSAQRRK--SGEPYIIHPLAVSQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 92 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 152 TLVVKLADRVHNAR--------TWRYVKTTSAQKKARETLDVYAPLANRLGMNA-IKTEL 202
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 203 EELSFKVLYPK 213
>gi|86137269|ref|ZP_01055847.1| guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative,
partial [Roseobacter sp. MED193]
gi|85826593|gb|EAQ46790.1| guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative,
partial [Roseobacter sp. MED193]
Length = 385
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
I +A + H Q R G PY HPVAVA +LT + + II+ALLHDT+ED
Sbjct: 22 KIAEAFAYGEEMHEGQFRHS--GEPYFTHPVAVAALLTE--QRLDDATIITALLHDTIED 77
Query: 146 TDTTFEEIEREFGPRVRSVVEELTD--NKHMTRDERKRCQ----ILHAPHSSHEAKLVKL 199
T ++EE+ R FG V +V+ +T N ++ E K+ + + A LVKL
Sbjct: 78 TKASYEEVARRFGEEVAELVDGVTKLTNLQLSSRETKQAENFRKLFMAMSKDLRVILVKL 137
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAP--IEAELDALFAKYCTP 257
AD+LHN+R I+ P E++ Q D+ L G + EL+ L K P
Sbjct: 138 ADRLHNMRTIKAMRP-----EKQAQKARETMDIYAPLAGRMGMQWMREELEDLAFKVLNP 192
Query: 258 REGREN 263
EGR++
Sbjct: 193 -EGRQS 197
>gi|376284629|ref|YP_005157839.1| hypothetical protein CD31A_1137 [Corynebacterium diphtheriae 31A]
gi|376287632|ref|YP_005160198.1| hypothetical protein CDBH8_1108 [Corynebacterium diphtheriae BH8]
gi|419860699|ref|ZP_14383340.1| hypothetical protein W5M_05206 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|371578144|gb|AEX41812.1| hypothetical protein CD31A_1137 [Corynebacterium diphtheriae 31A]
gi|371584966|gb|AEX48631.1| hypothetical protein CDBH8_1108 [Corynebacterium diphtheriae BH8]
gi|387983093|gb|EIK56592.1| hypothetical protein W5M_05206 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 185
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 92/180 (51%), Gaps = 15/180 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA A++ H Q+RK + PYI HP +V +L + V I+ALLHD +ED
Sbjct: 6 LAKAISIAAYAHRNQKRKATD-IPYICHPYSV--MLIAQSCTCDEDVFIAALLHDVLEDA 62
Query: 147 DTTFEEIE--REFGPRVRSVVEELTDNKHMT-RDERKRCQILHAPHSSHEAKLVKLADKL 203
+ E E +FGPRV S+V+E+T + ++ ER + H +SHEA +V LADK
Sbjct: 63 AEEYSEHEMLNDFGPRVVSIVKEVTKDSSLSMWQERANSYLTHLETASHEALIVCLADKT 122
Query: 204 HNLR----DIERSLPVNWT-----EERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKY 254
HNL D E W ++R+ +++ DV++ G + P A+ L + +
Sbjct: 123 HNLMSMVADYEAVGDALWARFNAGKDRQLWWYSSVWDVLERRLGKDFPGVADYARLLSTF 182
>gi|359790208|ref|ZP_09293117.1| GTP pyrophosphokinase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359253888|gb|EHK56965.1| GTP pyrophosphokinase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 741
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 76/141 (53%), Gaps = 15/141 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PD A++N KA +A KH QRR G PY HP+ VA ILT + + I
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGHQRR--ASGDPYFSHPLEVAAILTEMH--MDEATIA 67
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T +EI+ FGP + +VE LT K + +K Q +L A
Sbjct: 68 VALLHDTIEDTTATRQEIDELFGPDLGKLVEGLTKLKKLDLVSKKAEQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 128 EDVRVLLVKLADRLHNMRTLD 148
>gi|335046678|ref|ZP_08539701.1| GTP diphosphokinase [Oribacterium sp. oral taxon 108 str. F0425]
gi|363896423|ref|ZP_09322974.1| hypothetical protein HMPREF9624_01718 [Oribacterium sp. ACB7]
gi|333760464|gb|EGL38021.1| GTP diphosphokinase [Oribacterium sp. oral taxon 108 str. F0425]
gi|361960709|gb|EHL13942.1| hypothetical protein HMPREF9624_01718 [Oribacterium sp. ACB7]
Length = 755
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 96/193 (49%), Gaps = 28/193 (14%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
H + + I KA + A +H Q+RK G PYI HP+ VA IL L + I + L
Sbjct: 35 HPSEDLSMITKAYEVAKEQHKEQKRK--SGEPYIIHPLCVAIILADLE--MDKETIAAGL 90
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELT---------DNKHMTRDERKRCQILHAPH 189
LHD VEDT T EE+E+EF P V ++V+ +T D M + ++ + A
Sbjct: 91 LHDVVEDTGMTLEEVEKEFNPDVATLVDGVTKLTKLNLNSDKVEMQAENLRKMFVSMA-- 148
Query: 190 SSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQ-----GLRGTNAPIE 244
++KLAD+LHNLR +E P E+RK + AR+ ++ R + I+
Sbjct: 149 KDIRVIIIKLADRLHNLRTLEYQSP----EKRKEK----ARESLEIYSPLADRLGISKIK 200
Query: 245 AELDALFAKYCTP 257
E+D L KY P
Sbjct: 201 IEMDDLSLKYLEP 213
>gi|326800392|ref|YP_004318211.1| (p)ppGpp synthetase I SpoT/RelA [Sphingobacterium sp. 21]
gi|326551156|gb|ADZ79541.1| (p)ppGpp synthetase I, SpoT/RelA [Sphingobacterium sp. 21]
Length = 737
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 73/143 (51%), Gaps = 36/143 (25%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I +A D A H RRK G PYI HP+AVA I LG S I+ ALLHD V
Sbjct: 38 IRRAFDMALENHKDMRRK--SGEPYIYHPIAVAQIAAEEIGLGTTS----IVCALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAK-------- 195
EDTD T +EIE +FG +V +++ LT + + P+SS +A+
Sbjct: 92 EDTDITLDEIENKFGKKVAKIIDGLT-----------KISGIFDPNSSIQAENFRKMLLT 140
Query: 196 --------LVKLADKLHNLRDIE 210
L+KLAD+LHN+R +E
Sbjct: 141 LADDVRVILIKLADRLHNMRTME 163
>gi|312110098|ref|YP_003988414.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y4.1MC1]
gi|336234522|ref|YP_004587138.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus thermoglucosidasius
C56-YS93]
gi|423719137|ref|ZP_17693319.1| (p)ppGpp synthetase I spoT/relA [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215199|gb|ADP73803.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y4.1MC1]
gi|335361377|gb|AEH47057.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus thermoglucosidasius
C56-YS93]
gi|383368040|gb|EID45315.1| (p)ppGpp synthetase I spoT/relA [Geobacillus thermoglucosidans
TNO-09.020]
Length = 731
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 97/181 (53%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA +FA H Q RK G PYI HP+ VA IL L +P I + LHD VEDT
Sbjct: 28 IKKAYEFADRAHRDQYRKS--GEPYIIHPIQVAGILVDLK--MDPATIAAGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERK---RCQILHAPHSSHEAKLVKLA 200
+ T E++EREFG V +V+ +L K+ +++E++ ++ A L+KLA
Sbjct: 84 EATKEDLEREFGSEVAMLVDGVTKLGKIKYKSQEEQQAENHRKMFLAMAQDIRVILIKLA 143
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R + + LP+ E++ + N ++ L R + I+ EL+ +Y P+
Sbjct: 144 DRLHNMRTL-KHLPI----EKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQ 198
Query: 259 E 259
+
Sbjct: 199 Q 199
>gi|442555432|ref|YP_007365257.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Lawsonia
intracellularis N343]
gi|441492879|gb|AGC49573.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Lawsonia
intracellularis N343]
Length = 733
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 10/134 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA +A+ H Q R G PY+ HP+AVA +L+ +G + I++ALLHDTVEDT
Sbjct: 35 VQKAYVYAAAAHEGQLR--LSGEPYLSHPLAVAEMLSEMG--FDAYAIMAALLHDTVEDT 90
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
+ E+IE EFG +V +V +T M+ + ++ Q ++ A +VKLA
Sbjct: 91 KCSLEDIETEFGKQVADIVNGVTKISMMSFESKEEQQAENFRKMILAMSQDIRVPIVKLA 150
Query: 201 DKLHNLRDIERSLP 214
D+LHN+R + P
Sbjct: 151 DRLHNMRTLNFQKP 164
>gi|433444159|ref|ZP_20409169.1| GTP pyrophosphokinase [Anoxybacillus flavithermus TNO-09.006]
gi|432001807|gb|ELK22676.1| GTP pyrophosphokinase [Anoxybacillus flavithermus TNO-09.006]
Length = 732
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 17/188 (9%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S D + I +A +FA H Q RK G PYI HP+ VA IL L +P I + L
Sbjct: 21 SKDDVQFIERAYEFAKEAHREQYRKS--GEPYIIHPIQVAGILVDLE--MDPATIAAGFL 76
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHE 193
HD VEDT T E++EREFG V +V+ +T H + ++ A
Sbjct: 77 HDVVEDTHVTKEDLEREFGKEVAMLVDGVTKLGKIKYKSHEEQQAENHRKMFLAMAQDIR 136
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALF 251
L+KLAD+LHN+R + + LP+ E++ + N ++ L R + I+ EL+
Sbjct: 137 VILIKLADRLHNMRTL-KHLPI----EKQRRIANETLEIFAPLAHRLGISKIKWELEDTA 191
Query: 252 AKYCTPRE 259
+Y P++
Sbjct: 192 LRYLNPQQ 199
>gi|228471556|ref|ZP_04056331.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Capnocytophaga gingivalis ATCC 33624]
gi|228277132|gb|EEK15812.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Capnocytophaga gingivalis ATCC 33624]
Length = 731
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 74/131 (56%), Gaps = 11/131 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH-LGKVSNPVVIISALLHDTVED 145
I KA D A H QRRK G PYI HP+AVA I+ + +G + V I SALLHD VED
Sbjct: 37 IRKAFDVAVDAHKEQRRKS--GEPYIYHPIAVAKIVAYDIG--LDAVSIASALLHDVVED 92
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKL 199
T T EEI ++FG + +V+ LT ++RD Q +L + L+K+
Sbjct: 93 TPITIEEIAQQFGDTIAKIVKGLTKISDLSRDTDVSFQAENFRKMLLTLNDDVRVILIKI 152
Query: 200 ADKLHNLRDIE 210
AD+LHN++ ++
Sbjct: 153 ADRLHNMQTMD 163
>gi|94986614|ref|YP_594547.1| guanosine polyphosphate pyrophosphohydrolases/synthetases [Lawsonia
intracellularis PHE/MN1-00]
gi|94730863|emb|CAJ54226.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases [Lawsonia
intracellularis PHE/MN1-00]
Length = 731
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 10/134 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA +A+ H Q R G PY+ HP+AVA +L+ +G + I++ALLHDTVEDT
Sbjct: 33 VQKAYVYAAAAHEGQLR--LSGEPYLSHPLAVAEMLSEMG--FDAYAIMAALLHDTVEDT 88
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
+ E+IE EFG +V +V +T M+ + ++ Q ++ A +VKLA
Sbjct: 89 KCSLEDIETEFGKQVADIVNGVTKISMMSFESKEEQQAENFRKMILAMSQDIRVPIVKLA 148
Query: 201 DKLHNLRDIERSLP 214
D+LHN+R + P
Sbjct: 149 DRLHNMRTLNFQKP 162
>gi|296187176|ref|ZP_06855573.1| GTP diphosphokinase [Clostridium carboxidivorans P7]
gi|296048211|gb|EFG87648.1| GTP diphosphokinase [Clostridium carboxidivorans P7]
Length = 724
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 17/179 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA + A H Q+R+ G PYI HPV VA IL +G + I + LLHD +EDT+
Sbjct: 23 KAYNLADEAHKQQKRES--GEPYIMHPVEVACILAEMG--MDTSTITAGLLHDVIEDTEY 78
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLADK 202
T+E+I EF V ++V+ +L ++ T++E++ + L A L+KLAD+
Sbjct: 79 TYEDICSEFSVEVANLVDGVTKLGKIQYKTKEEQQADNVRKMLLAMAKDIRVILIKLADR 138
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
+HN+R + + +PV +E+ + F D+ L R + I+ EL+ L +Y P E
Sbjct: 139 MHNMRTL-KYMPVEKQKEKAKETF----DIYAPLAHRLGMSKIKWELEDLAFRYINPNE 192
>gi|212638570|ref|YP_002315090.1| GTP pyrophosphokinase [Anoxybacillus flavithermus WK1]
gi|212560050|gb|ACJ33105.1| GTP pyrophosphokinase (ppGpp synthetase) [Anoxybacillus
flavithermus WK1]
Length = 732
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 93/188 (49%), Gaps = 17/188 (9%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S D + I +A +FA H Q RK G PYI HP+ VA IL L +P I + L
Sbjct: 21 SKDDVQFIERAYEFAKEAHREQYRKS--GEPYIIHPIQVAGILVDLE--MDPATIAAGFL 76
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHE 193
HD VEDT T E++EREFG V +V+ +T H + ++ A
Sbjct: 77 HDVVEDTHVTKEDLEREFGKEVAMLVDGVTKLGKIKYKSHEEQQAENHRKMFLAMAQDIR 136
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALF 251
L+KLAD+LHN+R + + LP+ E++ + N ++ L R + I+ EL+
Sbjct: 137 VILIKLADRLHNMRTL-KHLPI----EKQRRIANETLEIFAPLAHRLGISKIKWELEDTA 191
Query: 252 AKYCTPRE 259
+Y P++
Sbjct: 192 LRYLNPQQ 199
>gi|18310920|ref|NP_562854.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
gi|18145602|dbj|BAB81644.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
Length = 726
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA D A H Q+R+ G PYI HP++VA IL +G +N +V + LLHD +EDTD
Sbjct: 23 KAYDLAFEAHKEQKRE--SGEPYITHPISVAMILADMGMDTNTIV--AGLLHDVIEDTDY 78
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLADK 202
T+E+I F V ++V+ +L K+ +++E++ + L A ++KLAD+
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADR 138
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
LHN+R ++ P E++ + D+ L R + I+ EL+ L +Y P E
Sbjct: 139 LHNMRTLKYMKP-----EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
>gi|404482912|ref|ZP_11018137.1| hypothetical protein HMPREF1135_01197 [Clostridiales bacterium
OBRC5-5]
gi|404344002|gb|EJZ70361.1| hypothetical protein HMPREF1135_01197 [Clostridiales bacterium
OBRC5-5]
Length = 182
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA FA H Q RK PYI HP+ V I++ + N V +++LLHDTVEDT
Sbjct: 2 IEKAVKFAIKAHEGQFRKGS-TIPYITHPLEVCTIVSLI--TDNEEVRVASLLHDTVEDT 58
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T EIE+EFG +V ++V +++K T ERK + S E K++ L DKL N+
Sbjct: 59 SVTITEIEKEFGKKVAALVGSESEDKSKTWIERKMHTLKTLKDESIEVKIIALGDKLSNI 118
Query: 207 RDIER 211
R+ R
Sbjct: 119 RNSAR 123
>gi|390449872|ref|ZP_10235472.1| (p)ppGpp synthetase I SpoT/RelA [Nitratireductor aquibiodomus RA22]
gi|389663445|gb|EIM74974.1| (p)ppGpp synthetase I SpoT/RelA [Nitratireductor aquibiodomus RA22]
Length = 750
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 78/143 (54%), Gaps = 19/143 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH QRR G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGHQRR--ASGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI+ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAVALLHDTIEDTSATRDEIDELFGPDIGKLVEGLTKLKRLDLVSKKAHQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 126 ISEDVRVLLVKLADRLHNMRTLD 148
>gi|386867250|ref|YP_006280244.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. animalis
ATCC 25527]
gi|385701333|gb|AFI63281.1| GTP pyrophosphokinase [Bifidobacterium animalis subsp. animalis
ATCC 25527]
Length = 778
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD M I+ +A A +H QRR+ G PYI HP+AVA IL LG P V+ +
Sbjct: 36 HHPDEDMEILSRAYTRAVIQHAEQRRR--SGEPYIIHPLAVAQILADLGM--GPGVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T +E EFG V +V+ +T M + + + + A
Sbjct: 92 LLHDTVEDTDYTLDECRAEFGDTVAGLVDGVTKLTKMDYGDSAQAETIRKMVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLR 207
+VKLAD++HN R
Sbjct: 152 VLVVKLADRVHNAR 165
>gi|326335831|ref|ZP_08202010.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Capnocytophaga sp. oral taxon 338 str. F0234]
gi|325691975|gb|EGD33935.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Capnocytophaga sp. oral taxon 338 str. F0234]
Length = 734
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 74/131 (56%), Gaps = 11/131 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH-LGKVSNPVVIISALLHDTVED 145
I KA D A H QRRK G PYI HP+AVA I+ + +G + + I SALLHD VED
Sbjct: 37 IRKAFDMAVDAHKEQRRKS--GEPYIFHPIAVAKIVAYDIG--LDAISIASALLHDVVED 92
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKL 199
T T EEI + FG V +V+ LT +++RD Q +L + L+K+
Sbjct: 93 TPITIEEIAQNFGDTVAKIVKGLTKISNLSRDTDVSFQAENFRKMLLTLNDDVRVILIKI 152
Query: 200 ADKLHNLRDIE 210
AD+LHN++ ++
Sbjct: 153 ADRLHNMQTMD 163
>gi|453062675|gb|EMF03665.1| metal dependent phosphohydrolase [Serratia marcescens VGH107]
Length = 206
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 70/128 (54%), Gaps = 9/128 (7%)
Query: 88 VKATDFASHKHHF--QRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+KA FA+ HH QRRK G PYI HP AV +L P ++ +A LHDTVED
Sbjct: 5 LKAQRFANDAHHACNQRRK-FTGEPYIVHPAAVVDLLQRAK--PTPEMVAAAWLHDTVED 61
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMT----RDERKRCQILHAPHSSHEAKLVKLAD 201
T T +I REFGP V VE LTD + + R RK + H+ + EA+ +KL D
Sbjct: 62 TAVTLADIRREFGPTVERYVEMLTDVQPRSYGGERLHRKNANLRHSAQACAEAQTIKLCD 121
Query: 202 KLHNLRDI 209
+ N ++I
Sbjct: 122 LIDNSKNI 129
>gi|373110748|ref|ZP_09525011.1| RelA/SpoT family protein [Myroides odoratimimus CCUG 10230]
gi|423130171|ref|ZP_17117846.1| RelA/SpoT family protein [Myroides odoratimimus CCUG 12901]
gi|423133854|ref|ZP_17121501.1| RelA/SpoT family protein [Myroides odoratimimus CIP 101113]
gi|371642102|gb|EHO07679.1| RelA/SpoT family protein [Myroides odoratimimus CCUG 10230]
gi|371646210|gb|EHO11725.1| RelA/SpoT family protein [Myroides odoratimimus CCUG 12901]
gi|371647908|gb|EHO13402.1| RelA/SpoT family protein [Myroides odoratimimus CIP 101113]
Length = 738
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 73/131 (55%), Gaps = 11/131 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVED 145
I KA D A H QRRK G YI HP+AVA I+ + +G P I +AL+HD VED
Sbjct: 36 IRKAFDVAVEAHKDQRRKS--GEAYIFHPIAVAKIVASEIG--LGPTSIAAALMHDVVED 91
Query: 146 TDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
TD T E+IE F P++ +VE LT + H++ ++L + L+K+
Sbjct: 92 TDITVEQIEEWFNPKIAKIVEGLTKMALLEPDPHISMQAENYRKMLLTLNDDVRVILIKI 151
Query: 200 ADKLHNLRDIE 210
AD+LHN++ +E
Sbjct: 152 ADRLHNMQTME 162
>gi|86609008|ref|YP_477770.1| RelA/SpoT family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557550|gb|ABD02507.1| RelA/SpoT family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 760
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 81/158 (51%), Gaps = 11/158 (6%)
Query: 63 ARLGEAPDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL 122
A L A D GD + +A + + +A +F+ H Q+RK G PYI HPVAVA +L
Sbjct: 29 ALLSGAEDPGDGLRPYTAEEADL-LRRAFEFSYCLHQGQKRKS--GDPYIAHPVAVATLL 85
Query: 123 THLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRC 182
LG + V + + LLHD +EDT+ T E +E EFG VR +VE +T +
Sbjct: 86 RELG--GDAVTVAAGLLHDVIEDTEVTPEALEAEFGSEVRLLVEGVTKLSKFNFSSKTEQ 143
Query: 183 Q------ILHAPHSSHEAKLVKLADKLHNLRDIERSLP 214
Q + A +VKLAD+LHN+R ++ P
Sbjct: 144 QAENFRRMFVAMAKDIRVIVVKLADRLHNMRTLQYLSP 181
>gi|423326636|ref|ZP_17304444.1| RelA/SpoT family protein [Myroides odoratimimus CCUG 3837]
gi|404608249|gb|EKB07728.1| RelA/SpoT family protein [Myroides odoratimimus CCUG 3837]
Length = 738
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 73/131 (55%), Gaps = 11/131 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVED 145
I KA D A H QRRK G YI HP+AVA I+ + +G P I +AL+HD VED
Sbjct: 36 IRKAFDVAVEAHKDQRRKS--GEAYIFHPIAVAKIVASEIG--LGPTSIAAALMHDVVED 91
Query: 146 TDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
TD T E+IE F P++ +VE LT + H++ ++L + L+K+
Sbjct: 92 TDITVEQIEEWFNPKIAKIVEGLTKMALLEPDPHISMQAENYRKMLLTLNDDVRVILIKI 151
Query: 200 ADKLHNLRDIE 210
AD+LHN++ +E
Sbjct: 152 ADRLHNMQTME 162
>gi|357384160|ref|YP_004898884.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pelagibacterium halotolerans B2]
gi|351592797|gb|AEQ51134.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Pelagibacterium halotolerans B2]
Length = 763
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 12/138 (8%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
++ +A++N KA + KH Q R G PY HP+ VA ILT L K+ + + + AL
Sbjct: 17 NADEALLN--KAYVYGMQKHGSQTR--ASGDPYFAHPLEVAAILTDL-KLDDATIAV-AL 70
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHDT+EDTD T EI+ FG + +V+ LT + + R+ Q +L A
Sbjct: 71 LHDTIEDTDATRAEIDEMFGTEIGQIVDGLTKIERLNLVSREEAQAENLRKLLLAISQDV 130
Query: 193 EAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 131 RVLLVKLADRLHNMRTLE 148
>gi|169343681|ref|ZP_02864680.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
gi|169298241|gb|EDS80331.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
Length = 726
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA D A H Q+R+ G PYI HP++VA IL +G +N +V + LLHD +EDTD
Sbjct: 23 KAYDLAFEAHKEQKRE--SGEPYITHPISVAMILADMGMDTNTIV--AGLLHDVIEDTDY 78
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLADK 202
T+E+I F V ++V+ +L K+ +++E++ + L A ++KLAD+
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADR 138
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
LHN+R ++ P E++ + D+ L R + I+ EL+ L +Y P E
Sbjct: 139 LHNMRTLKYMKP-----EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
>gi|110802270|ref|YP_699214.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
gi|110682771|gb|ABG86141.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
Length = 726
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA D A H Q+R+ G PYI HP++VA IL +G +N +V + LLHD +EDTD
Sbjct: 23 KAYDLAFEAHKEQKRES--GEPYITHPISVAMILADMGMDTNTIV--AGLLHDVIEDTDY 78
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLADK 202
T+E+I F V ++V+ +L K+ +++E++ + L A ++KLAD+
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADR 138
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
LHN+R ++ P E++ + D+ L R + I+ EL+ L +Y P E
Sbjct: 139 LHNMRTLKYMKP-----EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
>gi|392988581|ref|YP_006487174.1| GTP pyrophosphokinase [Enterococcus hirae ATCC 9790]
gi|392336001|gb|AFM70283.1| GTP pyrophosphokinase [Enterococcus hirae ATCC 9790]
Length = 737
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 16/144 (11%)
Query: 76 SGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
S PD + + KA D+A+ H Q RK G PYI HP+ VA IL L +P +
Sbjct: 17 SQYMGPDHVAFVQKACDYATAAHDGQFRK--SGEPYIIHPIQVAGILADLR--MDPHTVA 72
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILH 186
+ LHD VEDTD T ++++ EFGP V +V+ +T + + + RK +L
Sbjct: 73 TGFLHDVVEDTDVTLDDLKEEFGPDVAMLVDGVTKLGKIKYKSHEEQLAENHRK---MLL 129
Query: 187 APHSSHEAKLVKLADKLHNLRDIE 210
A +VKLAD+LHN+R ++
Sbjct: 130 AMAQDLRVIMVKLADRLHNMRTLK 153
>gi|282878228|ref|ZP_06287024.1| putative GTP diphosphokinase [Prevotella buccalis ATCC 35310]
gi|281299646|gb|EFA92019.1| putative GTP diphosphokinase [Prevotella buccalis ATCC 35310]
Length = 756
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 71/139 (51%), Gaps = 16/139 (11%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA H RR G PYI HP+AVA I LG S I SALLHD V
Sbjct: 43 ITKAFNFARQAHKGVRR--LSGEPYIMHPIAVAQIACEEMGLGSTS----ICSALLHDVV 96
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L L+
Sbjct: 97 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 156
Query: 198 KLADKLHNLRDIERSLPVN 216
K+ D+LHN+R ++ S P N
Sbjct: 157 KICDRLHNMRTLQ-SQPAN 174
>gi|255526671|ref|ZP_05393576.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium carboxidivorans P7]
gi|255509651|gb|EET85986.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium carboxidivorans P7]
Length = 724
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 96/179 (53%), Gaps = 17/179 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA + A H Q+R+ G PYI HPV VA IL +G + I + LLHD +EDT+
Sbjct: 23 KAYNLADEAHKQQKRES--GEPYIMHPVEVACILAEMG--MDTSTITAGLLHDVIEDTEY 78
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLADK 202
T+E+I EF V ++V+ +L ++ T++E++ + L A L+KLAD+
Sbjct: 79 TYEDICSEFSVEVANLVDGVTKLGKIQYKTKEEQQADNVRKMLLAMAKDIRVILIKLADR 138
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
+HN+R + + +PV +E+ + F D+ L R + I+ EL+ L +Y P E
Sbjct: 139 MHNMRTL-KYMPVEKQKEKAKETF----DIYAPLAHRLGMSKIKWELEDLAFRYINPNE 192
>gi|397670345|ref|YP_006511880.1| GTP diphosphokinase [Propionibacterium propionicum F0230a]
gi|395142267|gb|AFN46374.1| GTP diphosphokinase [Propionibacterium propionicum F0230a]
Length = 760
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 15/170 (8%)
Query: 51 PEAPAVEVHVHEARLGEA-PDTGDSDS-----GMHSPDAIMNIVK-ATDFASHKHHFQRR 103
PE P + + ARLG P + D P A +++++ A A H Q+R
Sbjct: 18 PEQPRLRMRHRLARLGAVRPRSAVLDPLFKIIKASHPKANLSLIEHAYRTAEQLHRGQKR 77
Query: 104 KDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRS 163
K G PYI HP+AVA IL LG ++ PV +++ALLHDTVEDT+ T E++ EF V
Sbjct: 78 KS--GDPYITHPLAVATILAELG-MTEPV-LVAALLHDTVEDTEYTLEQLREEFTDEVAR 133
Query: 164 VVEELTDNKHMTRDERKRCQILHA--PHSSHEAK--LVKLADKLHNLRDI 209
+V+ +T +T E + + + +S E + ++KLAD+LHN+R I
Sbjct: 134 MVDGVTKLDKVTYGETAKAETIRKMIMATSEEVRVLVIKLADRLHNMRTI 183
>gi|443474532|ref|ZP_21064506.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena biceps PCC 7429]
gi|443020698|gb|ELS34625.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena biceps PCC 7429]
Length = 761
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A DFA H Q R G PYI HP++VA IL LG + +I + LHD VEDT
Sbjct: 62 VCRALDFAYRLHDGQCR--ASGEPYILHPISVAAILKDLG--GSNAMIAAGFLHDVVEDT 117
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
D + ++IE +FG +R +VE +T ++ + + Q + A +VKLA
Sbjct: 118 DVSCDQIEEKFGKEIRQLVEGVTKLSKLSFESKTESQAENFRRMFLAMAQDIRVIIVKLA 177
Query: 201 DKLHNLRDIE 210
D+LHN+R ++
Sbjct: 178 DRLHNMRTLQ 187
>gi|429758836|ref|ZP_19291349.1| GTP diphosphokinase [Actinomyces sp. oral taxon 181 str. F0379]
gi|429173050|gb|EKY14587.1| GTP diphosphokinase [Actinomyces sp. oral taxon 181 str. F0379]
Length = 738
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 72/133 (54%), Gaps = 9/133 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A A H Q RK G PYI HPVAVA IL +G S + +ALLHDTVEDT
Sbjct: 25 IERAYATAEKAHRGQMRKS--GEPYITHPVAVATILAEVGMTSP--TLAAALLHDTVEDT 80
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADK 202
D + E++ +FGP + +V+ +T + ER + + L A L+KLAD+
Sbjct: 81 DYSLEQLTADFGPAIAQLVDGVTKLDKIRYGERAQSETLRKMIIAMSRDIRVLLIKLADR 140
Query: 203 LHNLRDIERSLPV 215
LHN R R +PV
Sbjct: 141 LHNARTW-RFVPV 152
>gi|379012216|ref|YP_005270028.1| hypothetical protein Awo_c23660 [Acetobacterium woodii DSM 1030]
gi|375303005|gb|AFA49139.1| hypothetical protein Awo_c23660 [Acetobacterium woodii DSM 1030]
Length = 188
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 85 MNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH-LGKVSNPVVIISALLHDTV 143
M+I KA +F++ H RK + PYI HP VA IL + N +I + LLHDTV
Sbjct: 1 MSIAKAIEFSAKAHAGYFRKGSK-VPYITHPFEVAKILGEAVDPEENEALICAGLLHDTV 59
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQI-LHAPHSSHEAKLVKLADK 202
EDT T+ E I +EFG V +V ++NK ++ ++RK+ I ++ E ++ ADK
Sbjct: 60 EDTGTSLETIRQEFGETVAKLVASDSENKSLSWEKRKQNTIDFLNNEATREMLMLACADK 119
Query: 203 LHNLRDIE 210
L N+R I+
Sbjct: 120 LANIRSIK 127
>gi|424788484|ref|ZP_18215238.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
intermedius BA1]
gi|422112705|gb|EKU16477.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
intermedius BA1]
Length = 738
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 78/137 (56%), Gaps = 10/137 (7%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP+ I + KA +A +H Q R+ G PYI HP+ VA IL L + + + L
Sbjct: 21 SPEDIALVQKALVYAVDRHRGQFRQS--GEPYIIHPIQVAGILAKLK--LDAISVACGFL 76
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHE 193
HD VEDT+ T ++++REFG VR +V+ +L K+M+ +E+ ++L A
Sbjct: 77 HDVVEDTNATLDDLDREFGHDVRGIVDGVTKLGKVKYMSHEEQLAENHRKMLMAMSKDIR 136
Query: 194 AKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 137 VILVKLADRLHNMRTLK 153
>gi|403724203|ref|ZP_10945960.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase, partial [Gordonia rhizosphera
NBRC 16068]
gi|403205676|dbj|GAB90291.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase, partial [Gordonia rhizosphera
NBRC 16068]
Length = 459
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 72/129 (55%), Gaps = 9/129 (6%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTT 149
A D A +H Q+RK G PYI HP+AVA IL LG + +++ALLHDTVEDT T
Sbjct: 84 AYDVADQRHQGQKRK--SGDPYITHPLAVATILADLGM--DTTTLVAALLHDTVEDTGYT 139
Query: 150 FEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLHN 205
EE+E++FG V +V+ +T + + + A ++K+AD+LHN
Sbjct: 140 LEELEKDFGSEVGHLVDGVTKLDKVALGSAAEAETIRKMIIAMARDPRVLVIKVADRLHN 199
Query: 206 LRDIERSLP 214
+R + R LP
Sbjct: 200 MRTM-RFLP 207
>gi|340344740|ref|ZP_08667872.1| HD domain-containing protein 3 [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339519881|gb|EGP93604.1| HD domain-containing protein 3 [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 187
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 75/123 (60%), Gaps = 2/123 (1%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++KA A KH Q+RKD TPY +H V + L +LG V++ V+ +A +HD +EDT
Sbjct: 8 VLKAKKLAHEKHKNQKRKDG-VTPYSDHLEGVVNRLKNLG-VTDKNVLAAAWMHDIIEDT 65
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
D TF++I +FG + ++ LT +K + + + ++ + ++S +AKL+KL D NL
Sbjct: 66 DVTFDQINEKFGREIAVIILSLTKDKSVAKKDIEQQYVTQLKNASIDAKLIKLCDISANL 125
Query: 207 RDI 209
+D+
Sbjct: 126 KDL 128
>gi|300778686|ref|ZP_07088544.1| GTP diphosphokinase [Chryseobacterium gleum ATCC 35910]
gi|300504196|gb|EFK35336.1| GTP diphosphokinase [Chryseobacterium gleum ATCC 35910]
Length = 736
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 10/134 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVED 145
I KA D A H QRRK G PYI HP+AVA I+ T +G I ALLHD +ED
Sbjct: 35 IRKAFDIALDAHKDQRRKS--GEPYIYHPIAVAKIVATEIG--LGATSIACALLHDVIED 90
Query: 146 TDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSHEAKLVKLA 200
+D T+E++++ FG ++ ++V LT ++++++ ++L L+K+A
Sbjct: 91 SDYTYEDLKKIFGEKIANIVNGLTKISIMNHQNISVQSENYRKLLLTLSEDFRVILIKIA 150
Query: 201 DKLHNLRDIERSLP 214
D+LHN+R +E P
Sbjct: 151 DRLHNMRTLESMAP 164
>gi|418463632|ref|ZP_13034628.1| (p)ppGpp synthetase, RelA/SpoT family protein [Saccharomonospora
azurea SZMC 14600]
gi|359732115|gb|EHK81136.1| (p)ppGpp synthetase, RelA/SpoT family protein [Saccharomonospora
azurea SZMC 14600]
Length = 774
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+H + + +A D A H QRRK G PYI HP+AVA IL LG + +++A
Sbjct: 63 LHPSADLALLQRAYDVAEELHREQRRK--SGDPYITHPLAVATILAELGM--DTTTLVAA 118
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD + E++ EFG +V +V+ +T + + + A
Sbjct: 119 LLHDTVEDTDYSVEQLTNEFGEKVAQLVDGVTKLDKVKLGTAAEAETIRKMVIAMARDPR 178
Query: 194 AKLVKLADKLHNLRDIERSLP 214
++KLAD+LHN+R + R LP
Sbjct: 179 VLVIKLADRLHNMRTM-RFLP 198
>gi|403744544|ref|ZP_10953770.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122078|gb|EJY56326.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus hesperidum
URH17-3-68]
Length = 725
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 96/192 (50%), Gaps = 25/192 (13%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S + + + +A +FAS H Q R G PYI HP+AVA+IL L + +++ALL
Sbjct: 22 SQEELDEVRQAYEFASRAHAGQVRMS--GEPYITHPLAVAYILADLQ--LDATAVVAALL 77
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHE 193
HD VEDT T I + FG V S+V+ +T K + D R+ Q + A
Sbjct: 78 HDVVEDTSVTDSNIVQTFGAEVASLVDGVTKLKRIRFDSREEQQAENLRKMFMAMARDIR 137
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLR------GTNAPIEAEL 247
++KLAD+LHN+R + P T+ RK AR+ ++ G N I+ EL
Sbjct: 138 VLIIKLADRLHNMRTLRYQTPA--TQMRK------ARETLEIFAPLAHRLGINT-IKWEL 188
Query: 248 DALFAKYCTPRE 259
+ + +Y P++
Sbjct: 189 EDISLRYLNPQQ 200
>gi|381165523|ref|ZP_09874753.1| guanosine polyphosphate synthetase/pyrophosphohydrolase
[Saccharomonospora azurea NA-128]
gi|379257428|gb|EHY91354.1| guanosine polyphosphate synthetase/pyrophosphohydrolase
[Saccharomonospora azurea NA-128]
Length = 781
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+H + + +A D A H QRRK G PYI HP+AVA IL LG + +++A
Sbjct: 70 LHPSADLALLQRAYDVAEELHREQRRK--SGDPYITHPLAVATILAELGM--DTTTLVAA 125
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD + E++ EFG +V +V+ +T + + + A
Sbjct: 126 LLHDTVEDTDYSVEQLTNEFGEKVAQLVDGVTKLDKVKLGTAAEAETIRKMVIAMARDPR 185
Query: 194 AKLVKLADKLHNLRDIERSLP 214
++KLAD+LHN+R + R LP
Sbjct: 186 VLVIKLADRLHNMRTM-RFLP 205
>gi|398831542|ref|ZP_10589720.1| (p)ppGpp synthetase, RelA/SpoT family [Phyllobacterium sp. YR531]
gi|398212249|gb|EJM98858.1| (p)ppGpp synthetase, RelA/SpoT family [Phyllobacterium sp. YR531]
Length = 734
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 77/142 (54%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGHQKR--ASGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T +EI+ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAIALLHDTIEDTSATRQEIDTLFGPDIGKLVEGLTKLKKLDLVSKKAVQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 126 ISDDVRVLLVKLADRLHNMRTL 147
>gi|377567607|ref|ZP_09796815.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia terrae NBRC 100016]
gi|377535147|dbj|GAB41980.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia terrae NBRC 100016]
Length = 794
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 73/130 (56%), Gaps = 9/130 (6%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A D A +H Q+RK G PYI HP+AVA IL LG + +I+ALLHDTVEDT
Sbjct: 90 RAYDVADERHSGQKRK--SGDPYITHPLAVATILADLGM--DTTTLIAALLHDTVEDTGY 145
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLH 204
+ + +E++FGP V +V+ +T + + + A ++K+AD+LH
Sbjct: 146 SLQALEKDFGPEVAHLVDGVTKLDKVALGSAAEAETIRKMIIAMARDPRVLVIKVADRLH 205
Query: 205 NLRDIERSLP 214
N+R + R LP
Sbjct: 206 NMRTM-RFLP 214
>gi|33239669|ref|NP_874611.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33237194|gb|AAP99263.1| GTP pyrophosphokinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 776
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 68/131 (51%), Gaps = 12/131 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ A D A H Q R G PYI HP+AVA +L +G ++P VI + LHD VEDT
Sbjct: 69 LASAFDLAFRLHKGQFR--VSGDPYISHPIAVADLLRDIG--ASPTVIAAGFLHDVVEDT 124
Query: 147 DTTFEEIEREFGPRVRSVVEELTD-------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T E+E FG VR +VE +T N+ + E R L A LVKL
Sbjct: 125 SITLPELEAYFGSEVRGLVEGVTKLGGIHFTNRTEAQAENLRKMFL-AMARDIRVVLVKL 183
Query: 200 ADKLHNLRDIE 210
AD+LHN+R IE
Sbjct: 184 ADRLHNMRTIE 194
>gi|117928545|ref|YP_873096.1| (p)ppGpp synthetase I SpoT/RelA [Acidothermus cellulolyticus 11B]
gi|117649008|gb|ABK53110.1| (p)ppGpp synthetase I, SpoT/RelA [Acidothermus cellulolyticus 11B]
Length = 820
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 80/145 (55%), Gaps = 10/145 (6%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ ++ +A + A H Q R+ G PYI HP+AVA IL LG P I++ALLHDTV
Sbjct: 102 VRDVQRAYEVAEFYHRGQLRR--SGDPYITHPLAVATILAELGM--TPPTIVAALLHDTV 157
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKL 199
EDT T +++ R+FG V S+V+ +T + + + + A ++KL
Sbjct: 158 EDTTYTLDQLRRDFGDEVASLVDGVTKLDRVKYGDAATVETVRKMVVAMARDPRVLVLKL 217
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQ 224
AD+LHN+R + R LP +ERK +
Sbjct: 218 ADRLHNMRTL-RYLPPE-KQERKAR 240
>gi|384046967|ref|YP_005494984.1| GTP pyrophosphokinase / guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Bacillus megaterium WSH-002]
gi|345444658|gb|AEN89675.1| GTP pyrophosphokinase / guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Bacillus megaterium WSH-002]
Length = 182
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 93/183 (50%), Gaps = 19/183 (10%)
Query: 85 MNIVK-ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
M+I+K A +A H Q RK + PYI HP+ V +IL G + VI +A LHD V
Sbjct: 1 MSIIKEARRYAEDAHSGQMRKLSD-IPYIVHPINVGNILEKAG--FSEEVIAAAYLHDAV 57
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
EDT T EEI + FG V +V T++K + +ERK+ I +S E K + +ADKL
Sbjct: 58 EDTSVTLEEIVQRFGLEVAEIVAAHTEDKSKSWEERKQHTIQTVKTASLEVKALIVADKL 117
Query: 204 HNLRDIERSL----PVNWT------EERKTQYFNWARDVVQGLRGTNAP-----IEAELD 248
NL ++ S V W E++K Y + ++ V+GL + P E E++
Sbjct: 118 DNLWSLKESYNQQGDVIWNSFKRGFEKQKWYYESISKYAVKGLESSQIPSFFYTYEQEVN 177
Query: 249 ALF 251
F
Sbjct: 178 DFF 180
>gi|332653665|ref|ZP_08419409.1| GTP diphosphokinase [Ruminococcaceae bacterium D16]
gi|332516751|gb|EGJ46356.1| GTP diphosphokinase [Ruminococcaceae bacterium D16]
Length = 745
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 10/134 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ A +A +HH Q RK G PYI HP+AVA I+ LG + V I+ALLHD +EDT
Sbjct: 27 LFAAFTYADAEHHGQLRKS--GEPYIIHPLAVADIVADLGLDVDSV--IAALLHDCIEDT 82
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
+ T +EI ++FG V ++VE +LT ++++++E + ++L A L+K+
Sbjct: 83 NATHDEIAKKFGAPVAALVEGVTKLTRVQYVSKEEEQMENLRKMLMAMAQDIRVILIKIC 142
Query: 201 DKLHNLRDIERSLP 214
D+LHN+R +E P
Sbjct: 143 DRLHNMRTMEYQSP 156
>gi|152966992|ref|YP_001362776.1| (p)ppGpp synthetase I SpoT/RelA [Kineococcus radiotolerans
SRS30216]
gi|151361509|gb|ABS04512.1| (p)ppGpp synthetase I, SpoT/RelA [Kineococcus radiotolerans
SRS30216]
Length = 815
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Query: 81 PDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
P A +++V KA + A H QRRK G PYI HPVAVA IL LG P + +ALL
Sbjct: 100 PKADLSVVEKAFERAERAHDGQRRK--SGDPYITHPVAVATILAELGM--TPSTLAAALL 155
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAK 195
HDTVEDTD T + EFG + +V+ +T +T + + + + A
Sbjct: 156 HDTVEDTDYTLATLRAEFGDEIALLVDGVTKLDKVTYGDAAQAETVRKMIVAMAKDIRVL 215
Query: 196 LVKLADKLHNLR 207
++KLAD+LHN R
Sbjct: 216 VIKLADRLHNAR 227
>gi|393773075|ref|ZP_10361474.1| Rsh [Novosphingobium sp. Rr 2-17]
gi|197283686|gb|ACH57394.1| Rsh [Novosphingobium sp. Rr 2-17]
gi|392721457|gb|EIZ78923.1| Rsh [Novosphingobium sp. Rr 2-17]
Length = 697
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 75/136 (55%), Gaps = 12/136 (8%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
+ +A++N +A + KH Q+R G PY HPV VA ++T L + I++ALL
Sbjct: 18 ADEALLN--RAYVYTVQKHGSQKR--ASGDPYFSHPVEVAGLMTELK--LDQQTIMTALL 71
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKH---MTRDER---KRCQILHAPHSSHE 193
HDTVEDT T EEIE+ FGP V +V+ +T MT ER + L A
Sbjct: 72 HDTVEDTLATIEEIEKLFGPEVARLVDGVTKLSKIDVMTESERAAENLRKFLLAMSEDLR 131
Query: 194 AKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 132 VLLVKLADRLHNMRTL 147
>gi|299135106|ref|ZP_07028297.1| (p)ppGpp synthetase I, SpoT/RelA [Afipia sp. 1NLS2]
gi|298590083|gb|EFI50287.1| (p)ppGpp synthetase I, SpoT/RelA [Afipia sp. 1NLS2]
Length = 755
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 81/138 (58%), Gaps = 12/138 (8%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
H+ + ++N +A +A H Q+R G PY HP+ VA ILT L K+ + I++AL
Sbjct: 50 HTDEDLLN--RAYVYAMKAHGEQKRA--SGDPYFSHPLEVAAILTDL-KLDD-ATIVAAL 103
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHDT+EDT++T EI++ FG + ++VE LT K + R+ Q +L A +
Sbjct: 104 LHDTIEDTESTRAEIDQLFGTEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAISNDV 163
Query: 193 EAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 164 RVLLVKLADRLHNMRTME 181
>gi|255994169|ref|ZP_05427304.1| GTP diphosphokinase [Eubacterium saphenum ATCC 49989]
gi|255993837|gb|EEU03926.1| GTP diphosphokinase [Eubacterium saphenum ATCC 49989]
Length = 733
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 10/126 (7%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTT 149
A D A +H+ Q+RK G PYI HP AVA IL LG + +I+ LLHD +EDTD T
Sbjct: 26 AYDVAYKQHNGQKRK--SGEPYIIHPEAVAKILAELG--MDEDTLIAGLLHDVIEDTDFT 81
Query: 150 FEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADKL 203
E +E +FG VR +VE +T + + ++ Q + A ++KLAD+L
Sbjct: 82 PEMVEEKFGSDVRHLVEGVTKLGTLVFETKEEVQAENMRKMFLAMSKDIRVLIIKLADRL 141
Query: 204 HNLRDI 209
HNLR I
Sbjct: 142 HNLRTI 147
>gi|163782986|ref|ZP_02177981.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881666|gb|EDP75175.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenivirga sp. 128-5-R1-1]
Length = 702
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 70/128 (54%), Gaps = 12/128 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +F S KH Q RK G PY+ HP+ VA L L S V I+ LLHDT+EDTDT
Sbjct: 28 RAFEFVSEKHSGQLRKS--GEPYVIHPLEVAKTLAELNMDSTTV--IAGLLHDTLEDTDT 83
Query: 149 TFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKLAD 201
T+EEIE FG V +VE +T N + E R IL A +VKLAD
Sbjct: 84 TYEEIEELFGKDVADIVEGVTKIGKIKFKNLREAQAENFRKLIL-ATAKDIRVVVVKLAD 142
Query: 202 KLHNLRDI 209
+LHN++ +
Sbjct: 143 RLHNMKTL 150
>gi|448241081|ref|YP_007405134.1| metal dependent phosphohydrolase [Serratia marcescens WW4]
gi|445211445|gb|AGE17115.1| metal dependent phosphohydrolase [Serratia marcescens WW4]
Length = 206
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 70/128 (54%), Gaps = 9/128 (7%)
Query: 88 VKATDFASHKHHF--QRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+KA FA+ HH QRRK G PYI HP AV +L P ++ +A LHDTVED
Sbjct: 5 LKAQRFANDAHHACNQRRK-FTGEPYIVHPAAVVDLLQR--AEPTPEMVAAAWLHDTVED 61
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMT----RDERKRCQILHAPHSSHEAKLVKLAD 201
T T +I REFGP V VE LTD + + R RK + H+ + EA+ +KL D
Sbjct: 62 TAVTLADIRREFGPTVERYVEMLTDVQPRSYGGERLHRKNANLQHSAQACAEAQTIKLCD 121
Query: 202 KLHNLRDI 209
+ N ++I
Sbjct: 122 LIDNSKNI 129
>gi|46580488|ref|YP_011296.1| GTP pyrophosphokinase [Desulfovibrio vulgaris str. Hildenborough]
gi|387153786|ref|YP_005702722.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio vulgaris RCH1]
gi|46449907|gb|AAS96556.1| GTP pyrophosphokinase [Desulfovibrio vulgaris str. Hildenborough]
gi|311234230|gb|ADP87084.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio vulgaris RCH1]
Length = 717
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 12/145 (8%)
Query: 73 DSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPV 132
D + H I I +A +A+ H Q R G PY+ HP+AVA +L + +
Sbjct: 9 DKVAASHKDADISLIQRAYVYAAAGHAGQTRL--SGEPYLSHPLAVADLLAEMH--FDEA 64
Query: 133 VIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ-------IL 185
+ + LLHDTVEDTD E+I+REFG V +V+ +T MT D ++ Q IL
Sbjct: 65 TVAAGLLHDTVEDTDAGIEDIDREFGEEVADIVDGVTKISQMTFDSKEEAQAENIRKMIL 124
Query: 186 HAPHSSHEAKLVKLADKLHNLRDIE 210
H +VKLAD+LHN+R ++
Sbjct: 125 AMSHDI-RVLMVKLADRLHNMRTLD 148
>gi|383639223|ref|ZP_09951629.1| ppGpp synthetase/hydrolase [Streptomyces chartreusis NRRL 12338]
Length = 716
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 111/243 (45%), Gaps = 35/243 (14%)
Query: 26 KALPKLESGPKGLPLMYVPMVRKGKPEAPAVEVHVHEARLGEAPDTGDSDSGMHSPDAIM 85
KA P+++ G + P R P+A + V H A H PDA +
Sbjct: 9 KARPRIDLRRLGRAALLGPAARDRLPDAISHVVDAHRA---------------HHPDADL 53
Query: 86 N-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVE 144
+ +A A H Q RK G PYI HP+AV IL LG + + ++LLHDTVE
Sbjct: 54 EPLRRAYVLAESSHRGQMRK--SGEPYITHPLAVTLILAELG--AETTTLTASLLHDTVE 109
Query: 145 DTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
DTD T E++ +FG VR +V+ +T D E R ++L A + +KL
Sbjct: 110 DTDVTLEQVGEQFGEEVRYLVDGVTKLEKVDYGAAAEPETFR-KMLVATGNDVRVMSIKL 168
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLR---GTNAPIEAELDALFAKYCT 256
AD+LHN+R + P E++ + RDV+ L G A ++ EL+ L
Sbjct: 169 ADRLHNMRTLGVMRP-----EKQERIAKVTRDVLIPLAERLGVQA-LKTELEDLVFAILR 222
Query: 257 PRE 259
P E
Sbjct: 223 PEE 225
>gi|166368056|ref|YP_001660329.1| GTP pyrophosphokinase [Microcystis aeruginosa NIES-843]
gi|166090429|dbj|BAG05137.1| GTP pyrophosphokinase [Microcystis aeruginosa NIES-843]
Length = 765
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
+PD + I +A +FA H Q RK G PYI HP+AVA +L LG + +I +
Sbjct: 43 QNPDIDL-ICRAFNFAHKLHEGQYRKS--GEPYIAHPIAVAGLLRDLG--GDGAMIAAGF 97
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHD VEDT+ T EEIE FG VR++VE +T + Q + A
Sbjct: 98 LHDVVEDTEVTPEEIEARFGVEVRNLVEAVTKLSKFNFSSKTERQAENFRRMFLAMAQDI 157
Query: 193 EAKLVKLADKLHNLRDIE 210
+VKLAD+LHN++ +E
Sbjct: 158 RVIVVKLADRLHNMQTLE 175
>gi|120602193|ref|YP_966593.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio vulgaris DP4]
gi|120562422|gb|ABM28166.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio vulgaris DP4]
Length = 717
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 12/145 (8%)
Query: 73 DSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPV 132
D + H I I +A +A+ H Q R G PY+ HP+AVA +L + +
Sbjct: 9 DKVAASHKDADISLIQRAYVYAAAGHAGQTR--LSGEPYLSHPLAVADLLAEMH--FDEA 64
Query: 133 VIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ-------IL 185
+ + LLHDTVEDTD E+I+REFG V +V+ +T MT D ++ Q IL
Sbjct: 65 TVAAGLLHDTVEDTDAGIEDIDREFGEEVADIVDGVTKISQMTFDSKEEAQAENIRKMIL 124
Query: 186 HAPHSSHEAKLVKLADKLHNLRDIE 210
H +VKLAD+LHN+R ++
Sbjct: 125 AMSHDI-RVLMVKLADRLHNMRTLD 148
>gi|427390104|ref|ZP_18884510.1| RelA/SpoT family protein [Actinobaculum massiliae ACS-171-V-Col2]
gi|425733119|gb|EKU95925.1| RelA/SpoT family protein [Actinobaculum massiliae ACS-171-V-Col2]
Length = 765
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I++A + A+ H Q R+ G PYI HPVAVA IL LG + I+ ALLHDTVEDT
Sbjct: 44 IIRAYNVAAKCHEGQFRR--SGEPYITHPVAVATILAELGMDEDS--IVGALLHDTVEDT 99
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADK 202
D T E+ EFG V +V+ +T + E + + + A L+KLAD+
Sbjct: 100 DYTLREVREEFGSTVELLVDGVTKLDKVEYGEAAQAETVRKMVIAMAKDIRVLLIKLADR 159
Query: 203 LHNLR 207
LHN R
Sbjct: 160 LHNAR 164
>gi|297564854|ref|YP_003683826.1| (p)ppGpp synthetase I SpoT/RelA [Meiothermus silvanus DSM 9946]
gi|296849303|gb|ADH62318.1| (p)ppGpp synthetase I, SpoT/RelA [Meiothermus silvanus DSM 9946]
Length = 738
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 70/136 (51%), Gaps = 19/136 (13%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTT 149
A +FA H Q RK G PYI HPVAVA IL LG + +++ LLHDTVEDT+
Sbjct: 34 ALEFAFAAHQGQLRKS--GEPYIVHPVAVAEILAELG--LDAETLMAGLLHDTVEDTEVK 89
Query: 150 FEEIEREFGPRVRSVVE------ELTDNKHMTRDERKRC---------QILHAPHSSHEA 194
E+IE FG VR +VE +L H +ER Q+ A
Sbjct: 90 PEDIEERFGTAVRRIVEGETKVSKLYKLAHQVAEERPSLEEQRAEDLRQMFIAMAEDVRI 149
Query: 195 KLVKLADKLHNLRDIE 210
+VKLAD+LHNLR +E
Sbjct: 150 IIVKLADRLHNLRTLE 165
>gi|425464751|ref|ZP_18844061.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9809]
gi|389833148|emb|CCI22581.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9809]
Length = 765
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
+PD + I +A +FA H Q RK G PYI HP+AVA +L LG + +I +
Sbjct: 43 QNPDIDL-ICRAFNFAHKLHEGQYRKS--GEPYIAHPIAVAGLLRDLG--GDGAMIAAGF 97
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHD VEDT+ T EEIE FG VR++VE +T + Q + A
Sbjct: 98 LHDVVEDTEVTPEEIEARFGVEVRNLVEAVTKLSKFNFSSKTERQAENFRRMFLAMAQDI 157
Query: 193 EAKLVKLADKLHNLRDIE 210
+VKLAD+LHN++ +E
Sbjct: 158 RVIVVKLADRLHNMQTLE 175
>gi|337288950|ref|YP_004628422.1| (p)ppGpp synthetase I SpoT/RelA [Thermodesulfobacterium sp. OPB45]
gi|334902688|gb|AEH23494.1| (p)ppGpp synthetase I, SpoT/RelA [Thermodesulfobacterium geofontis
OPF15]
Length = 725
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 96/184 (52%), Gaps = 26/184 (14%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA ++A+ H Q RK G PY+ HP+ VA+IL + K+ P I + LLHD VED+
Sbjct: 25 KAYEWAARIHEGQMRKS--GEPYLSHPMEVAYILAQM-KLDLPT-IAAGLLHDVVEDSQV 80
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ-------ILHAPHSSHEAKLVKLAD 201
+ E+I++EFG V +V+ +T K++ K Q I+ A LVKLAD
Sbjct: 81 SIEDIKKEFGEEVAFIVDGVTKLKNLPSSVDKLTQQAESLRKIIFAMSKDLRVILVKLAD 140
Query: 202 KLHNLRDIERSLPVNWTEERKTQYFNWARDVVQ------GLRGTNAPIEAELDALFAKYC 255
+LHN+R +E + E K Q A++ ++ G G + ++ EL+ L KY
Sbjct: 141 RLHNMRTLE------YQAEHKRQRI--AKETLEIYAPLAGRLGIDW-VKCELEDLAFKYL 191
Query: 256 TPRE 259
P+E
Sbjct: 192 YPKE 195
>gi|255320206|ref|ZP_05361391.1| guanosine-3',5'-bis [Acinetobacter radioresistens SK82]
gi|421466349|ref|ZP_15915028.1| RelA/SpoT family protein [Acinetobacter radioresistens WC-A-157]
gi|421855245|ref|ZP_16287625.1| (p)ppGpp synthase/hydrolase SpoT [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
gi|255302645|gb|EET81877.1| guanosine-3',5'-bis [Acinetobacter radioresistens SK82]
gi|400203129|gb|EJO34122.1| RelA/SpoT family protein [Acinetobacter radioresistens WC-A-157]
gi|403189256|dbj|GAB73826.1| (p)ppGpp synthase/hydrolase SpoT [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
Length = 699
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 8/139 (5%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SPD + ++ A DFA H RK G PYI HP+AV IL H+ S +++AL+
Sbjct: 22 SPDDVERVLAACDFADLAHTGITRK--SGEPYILHPIAVTCILAHMRLDSE--TLMAALM 77
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRC----QILHAPHSSHEAK 195
HD VEDTD + E+I+ +FGP V +V+ +T H + + + +IL A
Sbjct: 78 HDVVEDTDFSKEDIKEKFGPVVAELVDGVTKLTHSSDKQYNKAASFRKILQATLQDPRVI 137
Query: 196 LVKLADKLHNLRDIERSLP 214
++KLAD+ HN+ ++ P
Sbjct: 138 IIKLADRYHNMTTLDALRP 156
>gi|403511177|ref|YP_006642815.1| bifunctional (p)ppGpp synthase/hydrolase relA [Nocardiopsis alba
ATCC BAA-2165]
gi|402800241|gb|AFR07651.1| bifunctional (p)ppGpp synthase/hydrolase relA [Nocardiopsis alba
ATCC BAA-2165]
Length = 725
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 77/142 (54%), Gaps = 9/142 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A + A+H H Q+RK G PYI HP+AVA IL LG + +ALLHDTVEDT
Sbjct: 24 IERAYEVAAHHHRHQKRK--SGDPYITHPLAVATILAELGM--QEATLAAALLHDTVEDT 79
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADK 202
D + +E+ +FG + +V+ +T + E + + + A ++KL D+
Sbjct: 80 DYSLDELRADFGDEIAELVDGVTKLDKVKYGEATQAETVRKMVVAMARDIRVLVIKLCDR 139
Query: 203 LHNLRDIERSLPVNWTEERKTQ 224
LHN+R + R LP E+K +
Sbjct: 140 LHNMRTL-RYLPKRAKREKKAR 160
>gi|225017246|ref|ZP_03706438.1| hypothetical protein CLOSTMETH_01172 [Clostridium methylpentosum
DSM 5476]
gi|224950021|gb|EEG31230.1| hypothetical protein CLOSTMETH_01172 [Clostridium methylpentosum
DSM 5476]
Length = 734
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 10/134 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I++A D A + H Q R G PY+ HP+AVA IL+ LG S+ I +ALLHD VEDT
Sbjct: 36 IMRAYDLAKNAHSGQLR--LSGEPYVTHPIAVACILSELGMDSD--CITAALLHDVVEDT 91
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHM---TRDERKR---CQILHAPHSSHEAKLVKLA 200
+++E+EFG V +V+ +T + TR+E++ ++L A ++KLA
Sbjct: 92 TIPLKQVEKEFGADVALLVDGVTKLGKIPLSTREEQQAENVRKMLLAMSKDIRVIIIKLA 151
Query: 201 DKLHNLRDIERSLP 214
D+LHN+R +E P
Sbjct: 152 DRLHNMRTLEFMKP 165
>gi|410096198|ref|ZP_11291187.1| RelA/SpoT family protein [Parabacteroides goldsteinii CL02T12C30]
gi|409226837|gb|EKN19741.1| RelA/SpoT family protein [Parabacteroides goldsteinii CL02T12C30]
Length = 762
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 72/137 (52%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ LG S I SALLHD V
Sbjct: 50 ITKAFNFANQAHAGVKRR--SGEPYIMHPIAVARIVCREMGLGSTS----ICSALLHDVV 103
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDT+ T ++I FGP++ +V+ LT E+ Q +L L+
Sbjct: 104 EDTEYTVQDISDMFGPKIAQIVDGLTKISGGIFGEQASAQAENFRKLLLTMSDDIRVILI 163
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 164 KIADRLHNMRTLGSMLP 180
>gi|392394513|ref|YP_006431115.1| RelA/SpoT family (p)ppGpp synthetase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525591|gb|AFM01322.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 726
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 10/137 (7%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP+ I + KA FA H Q R G YI+HP+ VA IL+ L + I +A L
Sbjct: 14 SPEGIKLVEKAYSFAEEAHRGQLRNS--GEEYIQHPLEVAKILSELE--MDEATIAAAFL 69
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQI------LHAPHSSHE 193
HD VEDT T E+IEREFG +V +V+ +T + ++ Q+ A
Sbjct: 70 HDVVEDTKYTIEDIEREFGSQVAILVDGVTKLGRIEYKSKEELQVENLRKMFLAMAKDIR 129
Query: 194 AKLVKLADKLHNLRDIE 210
L+KLAD+LHN+R ++
Sbjct: 130 VILIKLADRLHNMRTLK 146
>gi|339010669|ref|ZP_08643239.1| GTP pyrophosphokinase [Brevibacillus laterosporus LMG 15441]
gi|421875402|ref|ZP_16306994.1| GTP pyrophosphokinase [Brevibacillus laterosporus GI-9]
gi|338772824|gb|EGP32357.1| GTP pyrophosphokinase [Brevibacillus laterosporus LMG 15441]
gi|372455610|emb|CCF16543.1| GTP pyrophosphokinase [Brevibacillus laterosporus GI-9]
Length = 727
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 103/194 (53%), Gaps = 18/194 (9%)
Query: 74 SDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVV 133
++S M S D M + +A D A H Q RK G PYI HP+AVA ILT + + V
Sbjct: 12 ANSYMSSEDVTM-LERAYDLARKAHEGQVRKS--GVPYIMHPIAVAGILTDMH--MDAVT 66
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELT---DNKHMTRDER---KRCQILHA 187
+ + LHD VEDTD T +++ +EFG V +V+ +T K+ +++E+ ++L A
Sbjct: 67 VAAGFLHDVVEDTDITLDDLRKEFGSEVAHLVDGVTKLEKIKYKSKEEQLAENHRKMLVA 126
Query: 188 PHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEA 245
L+KLAD+LHN+R + + +EE++ + + ++ L R A ++
Sbjct: 127 MAQDIRVILIKLADRLHNMRTLR-----HMSEEKQREISDETLEIFAPLAHRLGIAFVKW 181
Query: 246 ELDALFAKYCTPRE 259
EL+ +Y P++
Sbjct: 182 ELEDTALRYLNPQQ 195
>gi|374386098|ref|ZP_09643598.1| RelA/SpoT family protein [Odoribacter laneus YIT 12061]
gi|373224027|gb|EHP46367.1| RelA/SpoT family protein [Odoribacter laneus YIT 12061]
Length = 729
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 77/134 (57%), Gaps = 11/134 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT-HLGKVSNPVVIISALLHDTVED 145
I KA DFA+ H +R+ G PYI HP+AVA I +G + VV +ALLHD VED
Sbjct: 30 IKKAFDFANEAHKGMKRRS--GEPYILHPIAVAKITAKEIGLKTKSVV--AALLHDVVED 85
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKH-MTRDERKRCQ----ILHAPHSSHEAKLVKLA 200
TD T E+I FGP++ S+V+ LT + M D K+ + ++ L+K+A
Sbjct: 86 TDYTVEDIASLFGPKIASLVDGLTKIREVMGSDTSKQAESFRKMILTLADDVRVILIKIA 145
Query: 201 DKLHNLRDIERSLP 214
D+LHN+R + S+P
Sbjct: 146 DRLHNMRTLS-SMP 158
>gi|262380422|ref|ZP_06073576.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Acinetobacter radioresistens SH164]
gi|262297868|gb|EEY85783.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Acinetobacter radioresistens SH164]
Length = 699
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 8/139 (5%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SPD + ++ A DFA H RK G PYI HP+AV IL H+ S +++AL+
Sbjct: 22 SPDDVERVLAACDFADLAHTGITRK--SGEPYILHPIAVTCILAHMRLDSE--TLMAALM 77
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRC----QILHAPHSSHEAK 195
HD VEDTD + E+I+ +FGP V +V+ +T H + + + +IL A
Sbjct: 78 HDVVEDTDFSKEDIKEKFGPVVAELVDGVTKLTHSSDKQYNKAASFRKILQATLQDPRVI 137
Query: 196 LVKLADKLHNLRDIERSLP 214
++KLAD+ HN+ ++ P
Sbjct: 138 IIKLADRYHNMTTLDALRP 156
>gi|425440615|ref|ZP_18820913.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9717]
gi|389718904|emb|CCH97199.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9717]
Length = 765
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 74/142 (52%), Gaps = 11/142 (7%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
+PD + I +A +FA H Q RK G PYI HP+AVA +L LG + +I +
Sbjct: 43 QNPDIDL-ISRAFNFAHKLHEGQYRKS--GEPYIAHPIAVAGLLRDLG--GDGAMIAAGF 97
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHD VEDT+ T EEIE FG VR++VE +T + Q + A
Sbjct: 98 LHDVVEDTEVTPEEIEARFGVEVRNLVEAVTKLSKFNFSSKTERQAENFRRMFLAMAQDI 157
Query: 193 EAKLVKLADKLHNLRDIERSLP 214
+VKLAD+LHN++ +E P
Sbjct: 158 RVIVVKLADRLHNMQTLEHLTP 179
>gi|376293144|ref|YP_005164818.1| hypothetical protein CDHC02_1035 [Corynebacterium diphtheriae HC02]
gi|372110467|gb|AEX76527.1| hypothetical protein CDHC02_1035 [Corynebacterium diphtheriae HC02]
Length = 185
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 15/180 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA A++ H Q+RK + PYI HP +V I+ + + V I+ALLHD +ED
Sbjct: 6 LAKAISIAAYAHRNQKRKATD-IPYICHPYSVMLIVQSWTR--DEDVFIAALLHDVLEDA 62
Query: 147 DTTFEE--IEREFGPRVRSVVEELT-DNKHMTRDERKRCQILHAPHSSHEAKLVKLADKL 203
+ E + +FGPRV S+V+E+T D+ +T ER + H +SH A +V LADK
Sbjct: 63 AEEYSEHDMLNDFGPRVVSIVKEVTKDSSLLTWQERADSYLAHLETASHGALIVCLADKT 122
Query: 204 HNLR----DIERSLPVNWT-----EERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKY 254
HNL D E W ++R+ +++ DV++ G + P A+ L + +
Sbjct: 123 HNLMSMVADYEAVGDALWARFNAGKDRQLWWYSSVWDVLERRLGKDFPGVADYARLLSTF 182
>gi|418406564|ref|ZP_12979883.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium tumefaciens 5A]
gi|358007057|gb|EHJ99380.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium tumefaciens 5A]
Length = 744
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 77/141 (54%), Gaps = 15/141 (10%)
Query: 79 HSPDA---IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PDA ++N KA +A KH Q+R + G PYI HP+ VA ILT + + + +
Sbjct: 14 YKPDANEALLN--KAYVYAMQKHGQQKRAN--GDPYISHPLEVAAILTEMHLDESTIAV- 68
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T EI+ FG + +VE LT K + RK Q +L A
Sbjct: 69 -ALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKKLDLVTRKAKQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 128 DDVRVLLVKLADRLHNMRTME 148
>gi|226356444|ref|YP_002786184.1| GTP diphosphokinase [Deinococcus deserti VCD115]
gi|226318434|gb|ACO46430.1| putative GTP diphosphokinase (ppGpp synthetase I) (RelA/SpoT) (GTP
pyrophosphokinase) [Deinococcus deserti VCD115]
Length = 760
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 69/136 (50%), Gaps = 20/136 (14%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTD-T 148
A +FA H RK G PYI HPVAVA IL LG + V ++ LLHDTVED +
Sbjct: 22 AYEFARDAHEGVNRK--SGEPYITHPVAVAVILARLGMDTESV--MAGLLHDTVEDVEGV 77
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKL------------ 196
TFE IE FGP VR +VE T +++ ++ ++ H L
Sbjct: 78 TFESIEELFGPDVRRIVEGETKVSKLSKQGSQQAEVAHTGRDMQAENLRQMLIAMTADIR 137
Query: 197 ---VKLADKLHNLRDI 209
VKLAD+LHN+R +
Sbjct: 138 IIVVKLADRLHNMRTL 153
>gi|325292409|ref|YP_004278273.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium sp. H13-3]
gi|325060262|gb|ADY63953.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium sp. H13-3]
Length = 763
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 77/141 (54%), Gaps = 15/141 (10%)
Query: 79 HSPDA---IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PDA ++N KA +A KH Q+R + G PYI HP+ VA ILT + + + +
Sbjct: 33 YKPDANEALLN--KAYVYAMQKHGQQKRAN--GDPYISHPLEVAAILTEMHLDESTIAV- 87
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T EI+ FG + +VE LT K + RK Q +L A
Sbjct: 88 -ALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKKLDLVTRKAKQAENLRKLLLAIS 146
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 147 DDVRVLLVKLADRLHNMRTME 167
>gi|262283461|ref|ZP_06061227.1| GTP diphosphokinase [Streptococcus sp. 2_1_36FAA]
gi|262260952|gb|EEY79652.1| GTP diphosphokinase [Streptococcus sp. 2_1_36FAA]
Length = 738
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDT
Sbjct: 28 VQKALVYAVDCHSGQFRKS--GEPYIVHPIQVAGILAKLK--LDAVTVACGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHEAKLVKLA 200
D + +++EREFGP VR++V+ +L K+ + +E+ ++L A LVKLA
Sbjct: 84 DASLDDLEREFGPDVRTIVDGVTKLGKVKYKSHEEQLAENHRKMLMAMSEDIRVILVKLA 143
Query: 201 DKLHNLRDIE 210
D+LHN+R ++
Sbjct: 144 DRLHNMRTLK 153
>gi|159184586|ref|NP_354053.2| GTP pyrophosphohydrolase/synthetase, RelA/SpoT family
[Agrobacterium fabrum str. C58]
gi|159139888|gb|AAK86838.2| GTP pyrophosphohydrolase/synthetase, RelA/SpoT family
[Agrobacterium fabrum str. C58]
Length = 744
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 77/141 (54%), Gaps = 15/141 (10%)
Query: 79 HSPDA---IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PDA ++N KA +A KH Q+R + G PYI HP+ VA ILT + + + +
Sbjct: 14 YKPDANEALLN--KAYVYAMQKHGQQKRAN--GDPYISHPLEVAAILTEMHLDESTIAV- 68
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T EI+ FG + +VE LT K + RK Q +L A
Sbjct: 69 -ALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKKLDLVTRKAKQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 128 DDVRVLLVKLADRLHNMRTME 148
>gi|315652179|ref|ZP_07905176.1| HD domain protein [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485574|gb|EFU75959.1| HD domain protein [Lachnoanaerobaculum saburreum DSM 3986]
Length = 182
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA FA+ H Q RK E PYI HP+ V I++ + + V +ALLHDTVEDT
Sbjct: 2 IEKAVKFATKAHEGQFRKGSE-IPYIIHPLEVCSIVSLM--TGDIEVRCAALLHDTVEDT 58
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T E+IE+ FG RV ++V +++K ERK I H + E K++ L DKL N+
Sbjct: 59 AVTVEDIEKNFGKRVAALVGRESEDKSKPWLERKIHTIKHLKNECIEVKMIALGDKLSNI 118
Query: 207 R 207
R
Sbjct: 119 R 119
>gi|41323484|gb|AAR99902.1| RelA [Agrobacterium tumefaciens]
Length = 744
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 77/141 (54%), Gaps = 15/141 (10%)
Query: 79 HSPDA---IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PDA ++N KA +A KH Q+R + G PYI HP+ VA ILT + + + +
Sbjct: 14 YKPDANEALLN--KAYVYAMQKHGQQKRAN--GDPYISHPLEVAAILTEMHLDESTIAV- 68
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T EI+ FG + +VE LT K + RK Q +L A
Sbjct: 69 -ALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKKLDLVTRKAKQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 128 DDVRVLLVKLADRLHNMRTME 148
>gi|212702010|ref|ZP_03310138.1| hypothetical protein DESPIG_00012 [Desulfovibrio piger ATCC 29098]
gi|212674525|gb|EEB35008.1| RelA/SpoT family protein [Desulfovibrio piger ATCC 29098]
Length = 719
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 12/135 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA FA+ H Q R G PY+ HP+AVA+ L +G P V + LLHDTVEDT
Sbjct: 23 IQKAYVFAATAHAGQTR--LSGEPYLSHPLAVAYTLADMG-FDEPTVA-AGLLHDTVEDT 78
Query: 147 DTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
TT EEI+ +FG V +V+ +T +NK + E R IL H +VKL
Sbjct: 79 GTTIEEIDDKFGEDVADIVDGVTKISMIVFENKEEAQAENIRKMILAMSHDM-RVLMVKL 137
Query: 200 ADKLHNLRDIERSLP 214
AD+LHN+ ++ P
Sbjct: 138 ADRLHNMSTLDFQKP 152
>gi|408787767|ref|ZP_11199494.1| GTP pyrophosphohydrolase/synthetase [Rhizobium lupini HPC(L)]
gi|424909913|ref|ZP_18333290.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392845944|gb|EJA98466.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|408486388|gb|EKJ94715.1| GTP pyrophosphohydrolase/synthetase [Rhizobium lupini HPC(L)]
Length = 744
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 77/141 (54%), Gaps = 15/141 (10%)
Query: 79 HSPDA---IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PDA ++N KA +A KH Q+R + G PYI HP+ VA ILT + + + +
Sbjct: 14 YKPDANEALLN--KAYVYAMQKHGQQKRAN--GDPYISHPLEVAAILTEMHLDESTIAV- 68
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T EI+ FG + +VE LT K + RK Q +L A
Sbjct: 69 -ALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKKLDLVTRKAKQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 128 DDVRVLLVKLADRLHNMRTME 148
>gi|417091986|ref|ZP_11956720.1| GTP pyrophosphokinase [Streptococcus suis R61]
gi|353532555|gb|EHC02224.1| GTP pyrophosphokinase [Streptococcus suis R61]
Length = 733
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 70/135 (51%), Gaps = 10/135 (7%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
D + + KA ++A+ H Q RK G PYI HP+ VA IL G + V + LHD
Sbjct: 22 DDVAFVEKALNYATEAHKLQFRK--SGEPYIVHPIQVAGILA--GLKLDAVTVACGFLHD 77
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHEAK 195
VEDT+ T +++E EFGP VR +V +T H + +L A
Sbjct: 78 VVEDTEVTLDDMEAEFGPEVRHIVGGVTKLGKVEYKSHEEQLAENHRNMLIAMSQDMRVI 137
Query: 196 LVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 138 LVKLADRLHNMRTLK 152
>gi|417860536|ref|ZP_12505592.1| RelA [Agrobacterium tumefaciens F2]
gi|338823600|gb|EGP57568.1| RelA [Agrobacterium tumefaciens F2]
Length = 754
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 77/141 (54%), Gaps = 15/141 (10%)
Query: 79 HSPDA---IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PDA ++N KA +A KH Q+R + G PYI HP+ VA ILT + + + +
Sbjct: 24 YKPDANEALLN--KAYVYAMQKHGQQKRAN--GDPYISHPLEVAAILTEMHLDESTIAV- 78
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T EI+ FG + +VE LT K + RK Q +L A
Sbjct: 79 -ALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKKLDLVTRKAKQAENLRKLLLAIS 137
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 138 DDVRVLLVKLADRLHNMRTME 158
>gi|27380176|ref|NP_771705.1| GTP pyrophosphokinase [Bradyrhizobium japonicum USDA 110]
gi|27353330|dbj|BAC50330.1| GTP pyrophosphokinase [Bradyrhizobium japonicum USDA 110]
Length = 762
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q R G PY HP+ VA ILT L K+ + I++ALLHDT+EDT+
Sbjct: 60 RAYVYAMKAHGSQTRAS--GDPYFSHPLEVAAILTDL-KLDD-ATIVAALLHDTIEDTEA 115
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EI++ FGP + ++VE LT K + R+ Q +L A LVKLAD+
Sbjct: 116 TRAEIDQIFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADDVRVLLVKLADR 175
Query: 203 LHNLRDIE 210
LHN+R +E
Sbjct: 176 LHNMRTLE 183
>gi|379735759|ref|YP_005329265.1| putative GTP pyrophosphokinase [Blastococcus saxobsidens DD2]
gi|378783566|emb|CCG03234.1| putative GTP pyrophosphokinase [Blastococcus saxobsidens DD2]
Length = 817
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 76/140 (54%), Gaps = 10/140 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A D A H Q+RK G PYI HP+AVA IL LG + +I+ALLHDTVEDT
Sbjct: 107 RAYDVAETAHAAQKRK--SGDPYITHPLAVATILAGLGM--DTTTLIAALLHDTVEDTGV 162
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLH 204
T E I +FG V +V+ +T + + + + + A ++KLAD+LH
Sbjct: 163 TLETITTDFGSEVAHLVDGVTKIDKVKLGDAAQAETIRKMIVAMSRDPRVLVIKLADRLH 222
Query: 205 NLRDIERSLPVNWTEERKTQ 224
N+R + R LP +ERK +
Sbjct: 223 NMRTL-RFLPPE-KQERKAR 240
>gi|378717723|ref|YP_005282612.1| GTP pyrophosphokinase RelA [Gordonia polyisoprenivorans VH2]
gi|375752426|gb|AFA73246.1| GTP pyrophosphokinase RelA [Gordonia polyisoprenivorans VH2]
Length = 801
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A D A +H Q RK G PYI HP+AVA IL LG + + +++ALLHDTVEDT
Sbjct: 96 RAYDVADERHQGQNRK--SGDPYITHPLAVATILADLGM--DTITLVAALLHDTVEDTGY 151
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLH 204
+ E++E EFG V +V+ +T + + + A ++K+AD+LH
Sbjct: 152 SLEQLESEFGAEVTHLVDGVTKLDKVALGSAAEAETIRKMIIAMARDPRVLVIKVADRLH 211
Query: 205 NLRDIERSLP 214
N+R + R LP
Sbjct: 212 NMRTM-RFLP 220
>gi|365898364|ref|ZP_09436325.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
STM 3843]
gi|365420889|emb|CCE08867.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Bradyrhizobium sp.
STM 3843]
Length = 761
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 79/139 (56%), Gaps = 11/139 (7%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++PD +++ +A +A H Q R G PY HP+ VA ILT L K+ + I++A
Sbjct: 50 YNPDTNEDLLNRAYVYAMKAHGSQTRA--SGDPYFTHPLEVAAILTDL-KLDD-ATIVAA 105
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
LLHDT+EDT+ T EI+ FGP + ++VE LT K + R+ Q +L A
Sbjct: 106 LLHDTIEDTEATRAEIDHLFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADD 165
Query: 192 HEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 166 VRVLLVKLADRLHNMRTLE 184
>gi|75676113|ref|YP_318534.1| RelA/SpoT protein [Nitrobacter winogradskyi Nb-255]
gi|74420983|gb|ABA05182.1| RelA/SpoT protein [Nitrobacter winogradskyi Nb-255]
Length = 774
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 79/139 (56%), Gaps = 11/139 (7%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++PD +++ +A +A H Q R G PY HP+ VA ILT L K+ + I++A
Sbjct: 61 YNPDTNEDMLNRAYVYAMKAHGEQIRA--SGDPYFSHPLEVAAILTGL-KLDD-ATIVAA 116
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
LLHDT+EDT+ T EI+ FGP + ++VE LT K + R+ Q +L A
Sbjct: 117 LLHDTIEDTEATRAEIDNMFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADD 176
Query: 192 HEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 177 VRVLLVKLADRLHNMRTLE 195
>gi|418300586|ref|ZP_12912406.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium tumefaciens
CCNWGS0286]
gi|355533324|gb|EHH02659.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium tumefaciens
CCNWGS0286]
Length = 744
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 77/141 (54%), Gaps = 15/141 (10%)
Query: 79 HSPDA---IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PDA ++N KA +A KH Q+R + G PYI HP+ VA ILT + + + +
Sbjct: 14 YKPDANEALLN--KAYVYAMQKHGQQKRAN--GDPYISHPLEVAAILTEMHLDESTIAV- 68
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T EI+ FG + +VE LT K + RK Q +L A
Sbjct: 69 -ALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKKLDLVTRKAKQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 128 DDVRVLLVKLADRLHNMRTME 148
>gi|124009973|ref|ZP_01694637.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Microscilla marina
ATCC 23134]
gi|123983995|gb|EAY24378.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Microscilla marina
ATCC 23134]
Length = 762
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 78/136 (57%), Gaps = 16/136 (11%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVS-NPVVIISALLHDTVED 145
I KA A+ H RRK G PYI HP+AVA I+ +G+++ P I +ALLHD VED
Sbjct: 43 IKKAFKTAADGHIEMRRK--TGEPYIYHPIAVAQIV--VGEINLGPTAIAAALLHDVVED 98
Query: 146 TDTTFEEIEREFGPRVRSVVEELTD-----------NKHMTRDERKRCQILHAPHSSHEA 194
T+ T EEIEREFG ++ +V+ +T ++++++ ++L
Sbjct: 99 TEVTIEEIEREFGDKIAKIVDGVTKISSTDVNDFEFDRNISQQAENFRKMLLTLSDDVRV 158
Query: 195 KLVKLADKLHNLRDIE 210
+VK+AD+LHN+R ++
Sbjct: 159 IMVKIADRLHNMRTLD 174
>gi|398821096|ref|ZP_10579584.1| (p)ppGpp synthetase, RelA/SpoT family [Bradyrhizobium sp. YR681]
gi|398228237|gb|EJN14371.1| (p)ppGpp synthetase, RelA/SpoT family [Bradyrhizobium sp. YR681]
Length = 761
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q R G PY HP+ VA ILT L K+ + I++ALLHDT+EDT+
Sbjct: 60 RAYVYAMKAHGSQTRAS--GDPYFSHPLEVAAILTDL-KLDD-ATIVAALLHDTIEDTEA 115
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EI++ FGP + ++VE LT K + R+ Q +L A LVKLAD+
Sbjct: 116 TRAEIDQIFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADDVRVLLVKLADR 175
Query: 203 LHNLRDIE 210
LHN+R +E
Sbjct: 176 LHNMRTLE 183
>gi|423348940|ref|ZP_17326596.1| RelA/SpoT family protein [Scardovia wiggsiae F0424]
gi|393703169|gb|EJD65370.1| RelA/SpoT family protein [Scardovia wiggsiae F0424]
Length = 785
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PD+ ++I+ KA A +H Q+R+ G PYI HP+AVA IL LG +P V+ +
Sbjct: 40 HYPDSDLSILRKAYKRAVIQHSHQQRR--SGEPYIIHPIAVAQILADLGM--SPKVVAAG 95
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDT+ T +E EFG V +V+ +T M + + + + A
Sbjct: 96 LLHDTVEDTEYTLDECRAEFGDTVAGLVDGVTKLTKMDVGDSAQAETIRKMVVAMSRDVR 155
Query: 194 AKLVKLADKLHNLR 207
+VKLAD++HN R
Sbjct: 156 VLVVKLADRVHNAR 169
>gi|417942063|ref|ZP_12585340.1| GTP diphosphokinase [Bifidobacterium breve CECT 7263]
gi|376167448|gb|EHS86284.1| GTP diphosphokinase [Bifidobacterium breve CECT 7263]
Length = 780
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 93/191 (48%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 42 HHPGEDLSILDRAYQRAVIQHSVQRRK--SGEPYIIHPLAVSQILADLGM--GPIVVAAG 97
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 98 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 157
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 158 TLVVKLADRVHNAR--------TWRYVKTTSAQKKARETLDVYAPLANRLGMNA-IKTEL 208
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 209 EELSFKVLYPK 219
>gi|427385656|ref|ZP_18881963.1| RelA/SpoT family protein [Bacteroides oleiciplenus YIT 12058]
gi|425726695|gb|EKU89558.1| RelA/SpoT family protein [Bacteroides oleiciplenus YIT 12058]
Length = 624
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH-LGKVSNPVVIISAL 138
+P + I A A H Q RK G PYI HP+AVA I+ L +NPV I+A
Sbjct: 25 TPQEMEQIRAAYQLAHEAHKEQTRK--TGEPYIIHPIAVARIVAEELSLGANPV--IAAF 80
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNK----HMTRDERKRCQILHAPHSSHEA 194
LHD VEDT T E+IE+ FG V +V +T K M++ Q+L + H A
Sbjct: 81 LHDVVEDTSYTMEDIEKLFGEDVAFLVRVVTKQKKEHYEMSKQLDNFKQMLDSVHYDIRA 140
Query: 195 KLVKLADKLHNLRDIERSLP 214
L+KLAD+LHN+R + P
Sbjct: 141 ILIKLADRLHNMRTLNSMKP 160
>gi|348028692|ref|YP_004871378.1| metal dependent phosphohydrolase [Glaciecola nitratireducens
FR1064]
gi|347946035|gb|AEP29385.1| metal dependent phosphohydrolase [Glaciecola nitratireducens
FR1064]
Length = 281
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 79/146 (54%), Gaps = 6/146 (4%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++ A + A+ H QRRK + +PY+ H + V +L G + ++ISALLHD +EDT
Sbjct: 11 LITALELAAKAHAEQRRK-SDHSPYLNHLIDVMSLLVKFGH-EDENLLISALLHDVIEDT 68
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
+E++ FG V V+ L+DNK ++ +RK Q+ A S KL+KL+D + N
Sbjct: 69 FVNYEQLYLMFGEEVADTVKGLSDNKLLSIQKRKEEQLEKAKDGSVNHKLIKLSDAVSN- 127
Query: 207 RDIERSLPVNWTEERKTQYFNWARDV 232
+P+NW+ ++ N + +
Sbjct: 128 ---ASMIPLNWSVKQAEDSINHLKKI 150
>gi|110798612|ref|YP_696617.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
gi|110673259|gb|ABG82246.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
Length = 726
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA D A H Q+R+ G PYI HP++VA IL +G +N +V + LLHD +EDTD
Sbjct: 23 KAYDLAFEAHKEQKRES--GEPYIIHPISVAMILADMGMDTNTIV--AGLLHDVIEDTDY 78
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLADK 202
T+E+I F V ++V+ +L K+ +++E++ + L A ++KLAD+
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADR 138
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
LHN+R ++ P E++ + D+ L R + I+ EL+ L +Y P E
Sbjct: 139 LHNMRTLKYMKP-----EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
>gi|94495396|ref|ZP_01301976.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Sphingomonas sp. SKA58]
gi|94424784|gb|EAT09805.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Sphingomonas sp. SKA58]
Length = 701
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A F+ KH Q+R G PY HP+ VA ILT + I++ALLHDT+EDT
Sbjct: 23 INRAYVFSVQKHGSQKR--ASGDPYFSHPIEVAGILTDFN--LDDQTIVTALLHDTIEDT 78
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHEAKLVKLA 200
T++EIE FGP V +V+ +L+ + M+ +ER + L A LVKLA
Sbjct: 79 LVTYDEIESAFGPDVARMVDGVTKLSKIEAMSENERAAENLRKFLLAMSDDIRVLLVKLA 138
Query: 201 DKLHNLRDI 209
D+LHN+R +
Sbjct: 139 DRLHNMRTL 147
>gi|359766961|ref|ZP_09270755.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia polyisoprenivorans NBRC
16320]
gi|359315589|dbj|GAB23588.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia polyisoprenivorans NBRC
16320]
Length = 806
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A D A +H Q RK G PYI HP+AVA IL LG + + +++ALLHDTVEDT
Sbjct: 101 RAYDVADERHQGQNRK--SGDPYITHPLAVATILADLGM--DTITLVAALLHDTVEDTGY 156
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLH 204
+ E++E EFG V +V+ +T + + + A ++K+AD+LH
Sbjct: 157 SLEQLESEFGAEVAHLVDGVTKLDKVALGSAAEAETIRKMIIAMARDPRVLVIKVADRLH 216
Query: 205 NLRDIERSLP 214
N+R + R LP
Sbjct: 217 NMRTM-RFLP 225
>gi|317122080|ref|YP_004102083.1| (p)ppGpp synthetase I SpoT/RelA [Thermaerobacter marianensis DSM
12885]
gi|315592060|gb|ADU51356.1| (p)ppGpp synthetase I, SpoT/RelA [Thermaerobacter marianensis DSM
12885]
Length = 731
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 70/127 (55%), Gaps = 10/127 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +F+ H Q+R G +IEHP+AVA IL L + +++ALLHDTVEDT
Sbjct: 32 RAFEFSKAAHQGQKR--ASGRDFIEHPLAVALILADLE--LDAATLVAALLHDTVEDTPV 87
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EE+EREFGP V +V+ +T + R Q + A L+KLAD+
Sbjct: 88 TLEEVEREFGPEVALLVDGVTKLNQIEWRTRLEEQAENLRKMFLAMARDIRVVLIKLADR 147
Query: 203 LHNLRDI 209
LHN+R +
Sbjct: 148 LHNMRTL 154
>gi|392429319|ref|YP_006470333.1| GTP pyrophosphokinase [Streptococcus intermedius JTH08]
gi|419776206|ref|ZP_14302129.1| GTP diphosphokinase [Streptococcus intermedius SK54]
gi|423071137|ref|ZP_17059912.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
intermedius F0413]
gi|355364499|gb|EHG12231.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
intermedius F0413]
gi|383846414|gb|EID83813.1| GTP diphosphokinase [Streptococcus intermedius SK54]
gi|391758468|dbj|BAM24085.1| GTP pyrophosphokinase [Streptococcus intermedius JTH08]
Length = 738
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 10/137 (7%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP+ + + KA +A +H Q R+ G PYI HP+ VA IL L + + + L
Sbjct: 21 SPEDVALVQKALVYAVDRHRGQFRQS--GEPYIIHPIQVAGILAKLK--LDAISVACGFL 76
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHE 193
HD VEDT+ T ++++REFG VR +V+ +L K+M+ +E+ ++L A
Sbjct: 77 HDVVEDTNATLDDLDREFGHDVRGIVDGVTKLGKVKYMSHEEQLAENHRKMLMAMSKDIR 136
Query: 194 AKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 137 VILVKLADRLHNMRTLK 153
>gi|168214142|ref|ZP_02639767.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
gi|168215563|ref|ZP_02641188.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
gi|170714350|gb|EDT26532.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
gi|182382330|gb|EDT79809.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
Length = 726
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA D A H Q+R+ G PYI HP++VA IL +G +N +V + LLHD +EDTD
Sbjct: 23 KAYDLAFEAHKEQKRES--GEPYIIHPISVAMILADMGMDTNTIV--AGLLHDVIEDTDY 78
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLADK 202
T+E+I F V ++V+ +L K+ +++E++ + L A ++KLAD+
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADR 138
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
LHN+R ++ P E++ + D+ L R + I+ EL+ L +Y P E
Sbjct: 139 LHNMRTLKYMKP-----EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
>gi|335034156|ref|ZP_08527517.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium sp. ATCC 31749]
gi|333794474|gb|EGL65810.1| GTP pyrophosphohydrolase/synthetase [Agrobacterium sp. ATCC 31749]
Length = 754
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 77/141 (54%), Gaps = 15/141 (10%)
Query: 79 HSPDA---IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PDA ++N KA +A KH Q+R + G PYI HP+ VA ILT + + + +
Sbjct: 24 YKPDANEALLN--KAYVYAMQKHGQQKRAN--GDPYISHPLEVAAILTEMHLDESTIAV- 78
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T EI+ FG + +VE LT K + RK Q +L A
Sbjct: 79 -ALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKKLDLVTRKAKQAENLRKLLLAIS 137
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 138 DDVRVLLVKLADRLHNMRTME 158
>gi|227495483|ref|ZP_03925799.1| GTP diphosphokinase [Actinomyces coleocanis DSM 15436]
gi|226831030|gb|EEH63413.1| GTP diphosphokinase [Actinomyces coleocanis DSM 15436]
Length = 769
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 73/134 (54%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P A ++++ +A + A H H Q RK G PYI HPVAVA IL +G P +++A
Sbjct: 47 HHPKADVDVIERAYNTAKHYHVGQMRK--SGEPYITHPVAVATILAEIGM--TPPTLVAA 102
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T E++ ++G + +V+ +T + + + L A
Sbjct: 103 LLHDTVEDTDYTLEQLAADYGDNIALLVDGVTKLDKVKYGSAAQSETLRKMIVAMSKDIR 162
Query: 194 AKLVKLADKLHNLR 207
L+KL D+LHN R
Sbjct: 163 TLLIKLGDRLHNAR 176
>gi|398800494|ref|ZP_10559765.1| guanosine polyphosphate synthetase/pyrophosphohydrolase [Pantoea
sp. GM01]
gi|398095278|gb|EJL85619.1| guanosine polyphosphate synthetase/pyrophosphohydrolase [Pantoea
sp. GM01]
Length = 197
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 68/118 (57%), Gaps = 6/118 (5%)
Query: 95 SHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIE 154
+H QRRK + PYI HP AVA ++ + + +I +A LHDTVEDT +T ++IE
Sbjct: 16 AHAAAGQRRKYTD-EPYIVHPAAVAELVRSV--TDDEQMIAAAWLHDTVEDTPSTIDDIE 72
Query: 155 REFGPRVRSVVEELTDNKH---MTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDI 209
R FGPRV +V+ LTD+ R RK H +S EA+ +KLAD + N R I
Sbjct: 73 RHFGPRVAELVDMLTDSAQPAAKNRAARKLAHFRHTADASPEAQTIKLADIIDNTRAI 130
>gi|429739490|ref|ZP_19273244.1| putative GTP diphosphokinase [Prevotella saccharolytica F0055]
gi|429156879|gb|EKX99498.1| putative GTP diphosphokinase [Prevotella saccharolytica F0055]
Length = 758
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA H RR G PYI HP+AVA I LG S I SALLHD V
Sbjct: 44 ITKAFNFAREAHKGVRR--LSGEPYIMHPIAVAQIACEEMGLGSTS----ICSALLHDVV 97
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT H + ++L L+
Sbjct: 98 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDHTSEQAENFKKLLLTMSDDIRVILI 157
Query: 198 KLADKLHNLRDIERSLP 214
K+ D+LHN+R ++ P
Sbjct: 158 KICDRLHNMRTLDSQPP 174
>gi|226227361|ref|YP_002761467.1| GTP pyrophosphokinase [Gemmatimonas aurantiaca T-27]
gi|226090552|dbj|BAH38997.1| GTP pyrophosphokinase [Gemmatimonas aurantiaca T-27]
Length = 717
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 92/179 (51%), Gaps = 17/179 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+V+A ++ H Q R G PY+ H + VA IL L + + S LLHD VEDT
Sbjct: 21 LVRAYKYSDAAHAGQVRH--SGEPYVSHCIEVARILADLQ--LDTATVTSGLLHDIVEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHM---TRDERK---RCQILHAPHSSHEAKLVKLA 200
D T E+IEREFG + +V+ LT ++ +R+ER+ ++L + L+KLA
Sbjct: 77 DITVEDIEREFGSEIAQIVDGLTKIANLPMSSREERQVENYRKLLLSIAKDARVILIKLA 136
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTP 257
D+LHN+R ++ P E++ + RD+ L R A + EL+ L K+ P
Sbjct: 137 DRLHNMRTLDWLAP-----EKRRRIAQETRDLYAPLAHRFGMAKVRWELEDLAFKHLEP 190
>gi|374986077|ref|YP_004961572.1| putative guanosine tetraphosphate (ppGpp) metabolism protein
[Streptomyces bingchenggensis BCW-1]
gi|297156729|gb|ADI06441.1| putative guanosine tetraphosphate (ppGpp) metabolism protein
[Streptomyces bingchenggensis BCW-1]
Length = 691
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 84/161 (52%), Gaps = 16/161 (9%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P A ++++ KA A H Q RK G PYI HP+AV IL LG + + ++
Sbjct: 23 HHPGADLDVLRKAYVLAESSHRGQMRK--SGEPYITHPLAVTLILAELG--AETTTLTAS 78
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSH 192
LLHDTVEDTD T +++ +FG VR +V+ +T D E R ++L A +
Sbjct: 79 LLHDTVEDTDVTLDQVGEQFGEEVRYLVDGVTKLEKVDYGAAAEPETFR-KMLVATGNDV 137
Query: 193 EAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
+KLAD+LHN+R + P E++ + RDV+
Sbjct: 138 RVMSIKLADRLHNMRTLGVMRP-----EKQARIAKVTRDVL 173
>gi|168208638|ref|ZP_02634263.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
gi|170712986|gb|EDT25168.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
Length = 726
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA D A H Q+R+ G PYI HP++VA IL +G +N +V + LLHD +EDTD
Sbjct: 23 KAYDLAFEAHKEQKRES--GEPYIIHPISVAMILADMGMDTNTIV--AGLLHDVIEDTDY 78
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLADK 202
T+E+I F V ++V+ +L K+ +++E++ + L A ++KLAD+
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADR 138
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
LHN+R ++ P E++ + D+ L R + I+ EL+ L +Y P E
Sbjct: 139 LHNMRTLKYMKP-----EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
>gi|410696071|gb|AFV75139.1| (p)ppGpp synthetase, RelA/SpoT family [Thermus oshimai JL-2]
Length = 732
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 71/140 (50%), Gaps = 13/140 (9%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S + + + A FA H QRR+ G PYI HPVAVA IL L + +++ LL
Sbjct: 25 SEEEVAQVEAAYRFAEAAHAGQRRRS--GEPYITHPVAVAEILASLR--MDAETVMAGLL 80
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTR-----DERKRC----QILHAPHS 190
HD VED EE+ER FG VR +VE T + + E +R Q+ A
Sbjct: 81 HDVVEDCGVAPEELERRFGAGVRRIVEGETKVSKLYKMANLEGEERRAEDLRQMFIAMAE 140
Query: 191 SHEAKLVKLADKLHNLRDIE 210
+VKLAD+LHNLR +E
Sbjct: 141 DVRIIIVKLADRLHNLRTLE 160
>gi|422758190|ref|ZP_16811952.1| GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
gi|322411025|gb|EFY01933.1| GTP pyrophosphokinase / guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 739
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA D+A+ H +Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALDYATAAHFYQVRK--SGEPYIVHPIQVAGILADLH--LDAVTVACGFLHDVVEDTDI 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T + IE +FG VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDNIEFDFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|284928658|ref|YP_003421180.1| (p)ppGpp synthetase, RelA/SpoT family [cyanobacterium UCYN-A]
gi|284809117|gb|ADB94822.1| (p)ppGpp synthetase, RelA/SpoT family [cyanobacterium UCYN-A]
Length = 745
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I A DFA H Q RK G PYI HPV VA IL LG + +I + LHD VEDT
Sbjct: 39 ICHAFDFAYQLHKGQYRK--SGEPYIVHPVTVAGILRDLG--GDKSMIAAGFLHDVVEDT 94
Query: 147 DTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
D T + IE FG VR +VE +T NK + E R L A +VKL
Sbjct: 95 DITADNIEEMFGQEVRLLVEGVTKLSKFNFSNKTEQQAENFRRMFL-AMAKDIRVIVVKL 153
Query: 200 ADKLHNLRDIERSLP 214
AD+LHN+R ++ P
Sbjct: 154 ADRLHNMRTLDALKP 168
>gi|167390435|ref|XP_001739352.1| HD domain-containing protein [Entamoeba dispar SAW760]
gi|165896993|gb|EDR24271.1| HD domain-containing protein, putative [Entamoeba dispar SAW760]
Length = 104
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Query: 132 VVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSS 191
+++ SALL DTVEDTDTTFEE+E FG ++ V E+TD+K + + RK+ QI H+ S
Sbjct: 5 MILSSALLRDTVEDTDTTFEELEEHFGKQITQYVREVTDDKKL-KVTRKKLQIEHSGTIS 63
Query: 192 HEAKLVKLADKLHNLRDIERSLPVNWTEERKTQ-YFNWAR 230
+ K++K ADK+ N+ I ++P + Q Y W +
Sbjct: 64 YGGKMIKYADKIQNMGSIISTVPCPFKPYEVAQGYMVWGK 103
>gi|373469605|ref|ZP_09560787.1| HD domain protein [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
gi|371764299|gb|EHO52720.1| HD domain protein [Lachnospiraceae bacterium oral taxon 082 str.
F0431]
Length = 182
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA FA+ H Q RK E PYI HP+ V I++ + + V +ALLHDTVEDT
Sbjct: 2 IEKAVKFATKAHEGQFRKGTE-IPYITHPLEVCSIVSLM--TDDIDVRCAALLHDTVEDT 58
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T E+I FG RV ++V + +++K + ERK + H E K++ L DKL N+
Sbjct: 59 SVTVEDIRENFGKRVAALVSKESEDKSKSWIERKTHTLEHLKKECIEVKMITLGDKLSNM 118
Query: 207 R 207
R
Sbjct: 119 R 119
>gi|182624408|ref|ZP_02952192.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
gi|177910411|gb|EDT72788.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
Length = 726
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA D A H Q+R+ G PYI HP++VA IL +G +N +V + LLHD +EDTD
Sbjct: 23 KAYDLAFEAHKEQKRES--GEPYIIHPISVAMILADMGMDTNTIV--AGLLHDVIEDTDY 78
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLADK 202
T+E+I F V ++V+ +L K+ +++E++ + L A ++KLAD+
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADR 138
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
LHN+R ++ P E++ + D+ L R + I+ EL+ L +Y P E
Sbjct: 139 LHNMRTLKYMKP-----EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
>gi|414162324|ref|ZP_11418571.1| RelA/SpoT family protein [Afipia felis ATCC 53690]
gi|410880104|gb|EKS27944.1| RelA/SpoT family protein [Afipia felis ATCC 53690]
Length = 809
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 81/138 (58%), Gaps = 12/138 (8%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
H+ + ++N +A +A H Q+R G PY HP+ VA ILT L K+ + I++AL
Sbjct: 104 HADEDLLN--RAYVYAMKAHGEQKRA--SGDPYFSHPLEVAAILTDL-KLDD-ATIVAAL 157
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHDT+EDT++T EI++ FG + ++VE LT K + R+ Q +L A +
Sbjct: 158 LHDTIEDTESTRVEIDQLFGTEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAISNDV 217
Query: 193 EAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R +E
Sbjct: 218 RVLLVKLADRLHNMRTME 235
>gi|323344335|ref|ZP_08084560.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prevotella oralis ATCC 33269]
gi|323094462|gb|EFZ37038.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prevotella oralis ATCC 33269]
Length = 758
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 71/139 (51%), Gaps = 16/139 (11%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA FA H RR G PYI HP+AVA I LG +S I SALLHD V
Sbjct: 42 ITKAFHFAKQAHKGVRR--LSGEPYIMHPIAVAQIACEEMGLGSIS----ICSALLHDVV 95
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT ++ Q +L L+
Sbjct: 96 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDKASAQAENFKKLLLTMSDDIRVILI 155
Query: 198 KLADKLHNLRDIERSLPVN 216
K+ D+LHN+R ++ S P N
Sbjct: 156 KICDRLHNMRTLD-SQPAN 173
>gi|168204879|ref|ZP_02630884.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
gi|422346604|ref|ZP_16427518.1| RelA/SpoT family protein [Clostridium perfringens WAL-14572]
gi|422874854|ref|ZP_16921339.1| GTP pyrophosphokinase [Clostridium perfringens F262]
gi|170663656|gb|EDT16339.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
gi|373226149|gb|EHP48476.1| RelA/SpoT family protein [Clostridium perfringens WAL-14572]
gi|380304188|gb|EIA16478.1| GTP pyrophosphokinase [Clostridium perfringens F262]
Length = 726
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA D A H Q+R+ G PYI HP++VA IL +G +N +V + LLHD +EDTD
Sbjct: 23 KAYDLAFEAHKEQKRES--GEPYIIHPISVAMILADMGMDTNTIV--AGLLHDVIEDTDY 78
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRCQI---LHAPHSSHEAKLVKLADK 202
T+E+I F V ++V+ +L K+ +++E++ + L A ++KLAD+
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQQADNVRKMLLAMAKDIRVIIIKLADR 138
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
LHN+R ++ P E++ + D+ L R + I+ EL+ L +Y P E
Sbjct: 139 LHNMRTLKYMKP-----EKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
>gi|384196848|ref|YP_005582592.1| GTP diphosphokinase [Bifidobacterium breve ACS-071-V-Sch8b]
gi|333109755|gb|AEF26771.1| GTP diphosphokinase [Bifidobacterium breve ACS-071-V-Sch8b]
gi|339479367|gb|ABE95835.1| GTP pyrophosphokinase/Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Bifidobacterium breve UCC2003]
Length = 774
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 93/191 (48%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 36 HHPGEDLSILDRAYQRAVIQHSVQRRK--SGEPYIIHPLAVSQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 92 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 152 TLVVKLADRVHNAR--------TWRYVKTTSAQKKARETLDVYAPLANRLGMNA-IKTEL 202
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 203 EELSFKVLYPK 213
>gi|348174215|ref|ZP_08881109.1| GTP pyrophosphokinase [Saccharopolyspora spinosa NRRL 18395]
Length = 772
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 75/141 (53%), Gaps = 9/141 (6%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+H + + +A D A KH QRRK G PYI HP+AVA IL LG + +++
Sbjct: 57 LHPQADLALLQRAYDVAEEKHSSQRRKS--GDPYITHPLAVATILAELGM--DTTTLVAG 112
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD + E++ EFG V +V+ +T + + + A
Sbjct: 113 LLHDTVEDTDYSLEKLGAEFGEEVGHLVDGVTKLDKVKLGAAAEAETIRKMIIAMARDPR 172
Query: 194 AKLVKLADKLHNLRDIERSLP 214
++KLAD+LHN+R + R LP
Sbjct: 173 VLVIKLADRLHNMRTM-RFLP 192
>gi|300023754|ref|YP_003756365.1| (p)ppGpp synthetase I SpoT/RelA [Hyphomicrobium denitrificans ATCC
51888]
gi|299525575|gb|ADJ24044.1| (p)ppGpp synthetase I, SpoT/RelA [Hyphomicrobium denitrificans ATCC
51888]
Length = 739
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 80/143 (55%), Gaps = 13/143 (9%)
Query: 79 HSPD-AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H+ D A++N +A +A H Q+R G PY HP+ VA ILT L K+ + I +A
Sbjct: 16 HTADEALLN--RAYVYAMKAHGNQKR--ASGAPYFSHPLEVAAILTEL-KLDD-ATIATA 69
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
LLHD +EDTD T EI++ FG + S+V+ LT K + +K Q +L A +
Sbjct: 70 LLHDVIEDTDATRAEIDQMFGAEIGSLVDGLTKIKRLDLVSKKAEQAENFRKLLIAISTD 129
Query: 192 HEAKLVKLADKLHNLRDIERSLP 214
LVKLAD+LHN+R +E P
Sbjct: 130 IRVLLVKLADRLHNMRTLEHMKP 152
>gi|296129647|ref|YP_003636897.1| (p)ppGpp synthetase I SpoT/RelA [Cellulomonas flavigena DSM 20109]
gi|296021462|gb|ADG74698.1| (p)ppGpp synthetase I, SpoT/RelA [Cellulomonas flavigena DSM 20109]
Length = 795
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 81 PDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
P A ++++ +A A H Q RK G PYI HPVAVA IL LG P +++ALL
Sbjct: 77 PKADLSVIEQAYVVAEKAHRGQLRK--SGDPYITHPVAVATILAELGM--TPSTLVAALL 132
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAK 195
HDTVEDTD + +++ R+FGP V +V+ +T + + + + + A
Sbjct: 133 HDTVEDTDYSLDQLRRDFGPEVAMLVDGVTKLDKVAYGDAAQSETVRKMVVAMSRDIRVL 192
Query: 196 LVKLADKLHNLR 207
++KL D+LHN R
Sbjct: 193 VIKLTDRLHNAR 204
>gi|256371735|ref|YP_003109559.1| (p)ppGpp synthetase I SpoT/RelA [Acidimicrobium ferrooxidans DSM
10331]
gi|256008319|gb|ACU53886.1| (p)ppGpp synthetase I, SpoT/RelA [Acidimicrobium ferrooxidans DSM
10331]
Length = 721
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 74/129 (57%), Gaps = 10/129 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
++ A A+ HH Q R+ G PYI HP+AVA + L ++P+ + +ALLHDTVEDT
Sbjct: 17 VLDALALATKAHHGQLRRS--GEPYIVHPLAVARRVAELR--ADPITVAAALLHDTVEDT 72
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
+ EE+E+ FG V ++V+ T ++ D ++ Q +L A ++KLA
Sbjct: 73 SISLEELEQRFGAEVAALVDGATKLDRLSFDSKEVAQAATMRKMLIAMARDVRVLVIKLA 132
Query: 201 DKLHNLRDI 209
D+LHN++ I
Sbjct: 133 DRLHNMQTI 141
>gi|39935759|ref|NP_948035.1| GTP pyrophosphokinase [Rhodopseudomonas palustris CGA009]
gi|192291346|ref|YP_001991951.1| (p)ppGpp synthetase I SpoT/RelA [Rhodopseudomonas palustris TIE-1]
gi|39649612|emb|CAE28134.1| GTP pyrophosphokinase [Rhodopseudomonas palustris CGA009]
gi|192285095|gb|ACF01476.1| (p)ppGpp synthetase I, SpoT/RelA [Rhodopseudomonas palustris TIE-1]
Length = 760
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q R G PY HP+ VA ILT+L K+ + I++ALLHDT+EDT+
Sbjct: 59 RAYVYAMMAHGEQTRAS--GDPYFSHPLEVAAILTNL-KLDD-ATIVAALLHDTIEDTEA 114
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EI+ FGP + ++VE LT K + R+ Q +L A L+KLAD+
Sbjct: 115 TRTEIDTMFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADDVRVLLIKLADR 174
Query: 203 LHNLRDIE 210
LHN+R +E
Sbjct: 175 LHNMRTLE 182
>gi|326387114|ref|ZP_08208724.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Novosphingobium nitrogenifigens DSM 19370]
gi|326208295|gb|EGD59102.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Novosphingobium nitrogenifigens DSM 19370]
Length = 697
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/140 (41%), Positives = 79/140 (56%), Gaps = 15/140 (10%)
Query: 79 HSPDA---IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
++PDA ++N +A + KH Q+R G PY HPV VA ++T L K+ I+
Sbjct: 14 YAPDADEAMLN--RAYVYTVQKHGTQKR--ASGDPYFSHPVEVAGLMTEL-KLDQET-IM 67
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPH 189
+ALLHDTVEDT T EEIER FG V +V+ +L+ + MT ER + L A
Sbjct: 68 TALLHDTVEDTLATTEEIERLFGANVARLVDGVTKLSKIETMTESERAAENLRKFLLAMS 127
Query: 190 SSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 128 EDLRVLLVKLADRLHNMRTL 147
>gi|402307720|ref|ZP_10826741.1| RelA/SpoT family protein [Prevotella sp. MSX73]
gi|400378177|gb|EJP31039.1| RelA/SpoT family protein [Prevotella sp. MSX73]
Length = 764
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA H RR G PYI HP+AVA I LG S I SALLHD V
Sbjct: 44 ITKAFNFARQAHKGVRR--LSGVPYIMHPIAVARIACEEMGLGSTS----ICSALLHDVV 97
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L L+
Sbjct: 98 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 157
Query: 198 KLADKLHNLRDIERSLP 214
K+ D+LHN+R + P
Sbjct: 158 KICDRLHNMRTLSSQPP 174
>gi|374317079|ref|YP_005063507.1| RelA/SpoT family (p)ppGpp synthetase [Sphaerochaeta pleomorpha str.
Grapes]
gi|359352723|gb|AEV30497.1| (p)ppGpp synthetase, RelA/SpoT family [Sphaerochaeta pleomorpha
str. Grapes]
Length = 676
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 12/135 (8%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I+ A F++ KH Q+R G PYI HP+AV IL L ++ I + LLHDT+EDT
Sbjct: 24 ILAAATFSASKHENQKR--ASGEPYIIHPLAVGEILIQLKMDAD--TICAGLLHDTIEDT 79
Query: 147 DTTFEEIEREFGPRVRSVVEELTD-------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
TT+EEI FG V +VE T NK + E R ++ A ++KL
Sbjct: 80 ATTYEEIATLFGQAVADMVEGETKIGALKAMNKSVQEAETIR-KMFFAMSKDIRVIIIKL 138
Query: 200 ADKLHNLRDIERSLP 214
ADKLHN+R ++ P
Sbjct: 139 ADKLHNMRTLQHLKP 153
>gi|417923789|ref|ZP_12567246.1| RelA/SpoT family protein [Streptococcus mitis SK569]
gi|342836671|gb|EGU70882.1| RelA/SpoT family protein [Streptococcus mitis SK569]
Length = 740
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 74/140 (52%), Gaps = 16/140 (11%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S + + + KA +A H Q RK G PYI HP+ VA IL L + V + L
Sbjct: 21 SKEDVAFVHKALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFL 76
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHS 190
HD VEDTD T +++EREFGP VR +V+ +T + + + RK +L A
Sbjct: 77 HDVVEDTDATLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSE 133
Query: 191 SHEAKLVKLADKLHNLRDIE 210
LVKL+D+LHN+R ++
Sbjct: 134 DIRVILVKLSDRLHNMRTLK 153
>gi|333905747|ref|YP_004479618.1| GTP pyrophosphokinase [Streptococcus parauberis KCTC 11537]
gi|333121012|gb|AEF25946.1| GTP pyrophosphokinase [Streptococcus parauberis KCTC 11537]
Length = 739
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 71/133 (53%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA +A+ H +Q RK G PYI HP+ VA IL L + V + LHD VEDT
Sbjct: 28 VKKALGYATDAHFYQARKS--GEPYIIHPIQVAGILADLQ--LDAVTVACGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLV 197
+ T E+IE EFG VR +V+ +T + + + RK +L A LV
Sbjct: 84 EITLEDIEDEFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSRDIRVILV 140
Query: 198 KLADKLHNLRDIE 210
KL+D+LHN+R ++
Sbjct: 141 KLSDRLHNMRTLK 153
>gi|329116715|ref|ZP_08245432.1| GTP diphosphokinase [Streptococcus parauberis NCFD 2020]
gi|326907120|gb|EGE54034.1| GTP diphosphokinase [Streptococcus parauberis NCFD 2020]
Length = 739
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 71/133 (53%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA +A+ H +Q RK G PYI HP+ VA IL L + V + LHD VEDT
Sbjct: 28 VKKALGYATDAHFYQARKS--GEPYIIHPIQVAGILADLQ--LDAVTVACGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLV 197
+ T E+IE EFG VR +V+ +T + + + RK +L A LV
Sbjct: 84 EITLEDIEDEFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSRDIRVILV 140
Query: 198 KLADKLHNLRDIE 210
KL+D+LHN+R ++
Sbjct: 141 KLSDRLHNMRTLK 153
>gi|315607698|ref|ZP_07882692.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prevotella buccae ATCC 33574]
gi|315250634|gb|EFU30629.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prevotella buccae ATCC 33574]
Length = 764
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA H RR G PYI HP+AVA I LG S I SALLHD V
Sbjct: 44 ITKAFNFARQAHKGVRR--LSGVPYIMHPIAVARIACEEMGLGSTS----ICSALLHDVV 97
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L L+
Sbjct: 98 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 157
Query: 198 KLADKLHNLRDIERSLP 214
K+ D+LHN+R + P
Sbjct: 158 KICDRLHNMRTLSSQPP 174
>gi|402311851|ref|ZP_10830782.1| HD domain protein [Lachnospiraceae bacterium ICM7]
gi|400370998|gb|EJP23977.1| HD domain protein [Lachnospiraceae bacterium ICM7]
Length = 182
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 70/125 (56%), Gaps = 3/125 (2%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA FA H Q RK PYI HP+ V I++ + N V +++LLHDTVEDT
Sbjct: 2 IEKAVKFAIKAHEGQFRKGS-TIPYITHPLEVCTIVSLI--TDNEEVRVASLLHDTVEDT 58
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T EIE++FG +V +V +++K T ERK + + S E K++ L DKL N+
Sbjct: 59 SVTITEIEKKFGKKVADLVGSESEDKSKTWIERKMHTLKTLKNESIEVKIIALGDKLSNI 118
Query: 207 RDIER 211
R+ R
Sbjct: 119 RNSAR 123
>gi|317052498|ref|YP_004113614.1| RelA/SpoT family protein [Desulfurispirillum indicum S5]
gi|316947582|gb|ADU67058.1| RelA/SpoT family protein [Desulfurispirillum indicum S5]
Length = 726
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 12/132 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA +A+ H RK G PYI HP+AVA++L + +P I + LLHDT+EDT
Sbjct: 26 INKAYIYAAQAHRGLMRKS--GEPYISHPLAVAYLLATMN--LDPYTITAGLLHDTIEDT 81
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRC--------QILHAPHSSHEAKLVK 198
TFEE++++FG V +V+ +T + M K ++L A L+K
Sbjct: 82 TATFEELQQQFGHDVAFLVDGVTKIETMVGKSNKSSDVKAETLRKMLIAMAKDIRVLLIK 141
Query: 199 LADKLHNLRDIE 210
LAD+LHN+R +E
Sbjct: 142 LADRLHNIRTLE 153
>gi|406883838|gb|EKD31353.1| hypothetical protein ACD_77C00344G0004 [uncultured bacterium]
Length = 764
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 79/133 (59%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
++KA +FA H+ RR+ G PYI HP++V+ I+ LG S I++AL+HD V
Sbjct: 34 VLKAFEFARAAHNGVRRRS--GEPYIIHPISVSKIVVQEIGLGYKS----IVAALMHDVV 87
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT------DNKHMTRDERKRCQILHAPHSSHEAKLV 197
EDT+ E+IER FG ++ S+V+ LT D+ ++ E + +IL + L+
Sbjct: 88 EDTEYNIEDIERLFGAKIASLVDGLTKIKSAFDSSSSSQAENFK-RILLTLNDDVRVILI 146
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R IE
Sbjct: 147 KLADRLHNMRTIE 159
>gi|288924691|ref|ZP_06418628.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prevotella buccae D17]
gi|288338478|gb|EFC76827.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prevotella buccae D17]
Length = 762
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 68/137 (49%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA H RR G PYI HP+AVA I LG S I SALLHD V
Sbjct: 42 ITKAFNFARQAHKGVRR--LSGVPYIMHPIAVARIACEEMGLGSTS----ICSALLHDVV 95
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT +R Q +L L+
Sbjct: 96 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGDRASAQAENFKKLLLTMSDDIRVILI 155
Query: 198 KLADKLHNLRDIERSLP 214
K+ D+LHN+R + P
Sbjct: 156 KICDRLHNMRTLSSQPP 172
>gi|186682934|ref|YP_001866130.1| metal dependent phosphohydrolase [Nostoc punctiforme PCC 73102]
gi|186465386|gb|ACC81187.1| metal dependent phosphohydrolase [Nostoc punctiforme PCC 73102]
Length = 196
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 83/172 (48%), Gaps = 7/172 (4%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP +A FA H Q RK PYI H +AVA ++ G N I+ALL
Sbjct: 22 SPILTNRFSEALVFAHQAHLHQVRKGGTKAPYISHLLAVASLVLEAG--GNEDEAIAALL 79
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKL 199
HD +ED I +FG V +V+EL+++K + + ERK I S+ A V +
Sbjct: 80 HDAIEDVQVEPRLIIEKFGENVCKIVQELSEDKALPKKERKSRYIESVCCFSNSAIRVSI 139
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQY----FNWARDVVQGLRGTNAPIEAEL 247
ADKLHN+R +S P W +E+ Y FN+ + VV N IE L
Sbjct: 140 ADKLHNIRCYSQS-PELWGKEQYEFYKDLLFNYEQFVVSNELLENQVIEIGL 190
>gi|383807399|ref|ZP_09962959.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Candidatus
Aquiluna sp. IMCC13023]
gi|383298753|gb|EIC91368.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Candidatus
Aquiluna sp. IMCC13023]
Length = 714
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Query: 81 PDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
P A + ++ KA +A H Q RK G YI HP+AV IL LG S P I +ALL
Sbjct: 13 PKADLAVIDKAFQYAEKYHTGQLRKS--GEQYITHPLAVGRILADLG--SGPATIAAALL 68
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAK 195
HDTVEDT+ + E +E++FGP V +V+ +T + + + + + A
Sbjct: 69 HDTVEDTEYSIEALEKDFGPEVALLVDGVTKLDKVKFGDSAQSETMRKMVVAMSKDVRVL 128
Query: 196 LVKLADKLHNLR 207
++KLAD+LHN R
Sbjct: 129 VIKLADRLHNAR 140
>gi|307709582|ref|ZP_07646035.1| GTP pyrophosphokinase [Streptococcus mitis SK564]
gi|307619618|gb|EFN98741.1| GTP pyrophosphokinase [Streptococcus mitis SK564]
Length = 740
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 10/137 (7%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S + + + KA +A H Q RK G PYI HP+ VA IL L + V + L
Sbjct: 21 SKEDVAFVHKALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFL 76
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHE 193
HD VEDTD T +++EREFGP VR +V+ +L K+ + +E+ ++L A
Sbjct: 77 HDVVEDTDATLDDLEREFGPDVRVIVDGVTKLGKVKYKSHEEQLAENHRKMLMAMSEDIR 136
Query: 194 AKLVKLADKLHNLRDIE 210
LVKL+D+LHN+R ++
Sbjct: 137 VILVKLSDRLHNMRTLK 153
>gi|85716288|ref|ZP_01047262.1| RelA/SpoT protein [Nitrobacter sp. Nb-311A]
gi|85696960|gb|EAQ34844.1| RelA/SpoT protein [Nitrobacter sp. Nb-311A]
Length = 751
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 11/139 (7%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++PD +++ +A +A H Q R G PY HP+ VA ILT L K+ + I++A
Sbjct: 38 YNPDTDEDLLNQAYVYAMKAHGEQIRA--SGDPYFSHPLEVAAILTGL-KLDD-ATIVAA 93
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
LLHDT+EDT+ T EI+ FGP + ++VE LT K + R+ Q +L A
Sbjct: 94 LLHDTIEDTEATRAEIDNMFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADD 153
Query: 192 HEAKLVKLADKLHNLRDIE 210
L+KLAD+LHN+R +E
Sbjct: 154 VRVLLIKLADRLHNMRTLE 172
>gi|456370069|gb|EMF48967.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Streptococcus
parauberis KRS-02109]
gi|457094333|gb|EMG24862.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Streptococcus
parauberis KRS-02083]
Length = 739
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 71/133 (53%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA +A+ H +Q RK G PYI HP+ VA IL L + V + LHD VEDT
Sbjct: 28 VKKALGYATDAHFYQARKS--GEPYIIHPIQVAGILADLQ--LDAVTVACGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLV 197
+ T E+IE EFG VR +V+ +T + + + RK +L A LV
Sbjct: 84 EITLEDIEDEFGKDVRDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSRDIRVILV 140
Query: 198 KLADKLHNLRDIE 210
KL+D+LHN+R ++
Sbjct: 141 KLSDRLHNMRTLK 153
>gi|383821694|ref|ZP_09976930.1| (p)ppGpp synthetase I SpoT/RelA [Mycobacterium phlei RIVM601174]
gi|383332543|gb|EID11019.1| (p)ppGpp synthetase I SpoT/RelA [Mycobacterium phlei RIVM601174]
Length = 782
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 78/140 (55%), Gaps = 12/140 (8%)
Query: 81 PDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
P A + ++ +A + A +H Q RK G PYI HP+AVAHIL LG + +I+ALL
Sbjct: 67 PKANLQLLQRAYEVAEERHANQLRKS--GDPYITHPLAVAHILAELGM--DTTTLIAALL 122
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHM-----TRDERKRCQILHAPHSSHEA 194
HDTVEDT T EE+ EFG V +V+ +T + E R I+ +
Sbjct: 123 HDTVEDTGYTLEELTAEFGSEVAHLVDGVTKLDKVALGTAAEGETIRKMIIAMARDAR-V 181
Query: 195 KLVKLADKLHNLRDIERSLP 214
++K+AD+LHN+R + R LP
Sbjct: 182 LVIKVADRLHNMRTM-RFLP 200
>gi|344343787|ref|ZP_08774654.1| (p)ppGpp synthetase I, SpoT/RelA [Marichromatium purpuratum 984]
gi|343804771|gb|EGV22670.1| (p)ppGpp synthetase I, SpoT/RelA [Marichromatium purpuratum 984]
Length = 732
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 10/140 (7%)
Query: 81 PDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLH 140
PD + +A F + H Q+RK G PYI HPVAVA IL + + +++ALLH
Sbjct: 42 PDQVREFYRAYLFGAEAHEGQKRKS--GEPYIYHPVAVARILAEMRM--DYKCLMAALLH 97
Query: 141 DTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEA 194
D +EDTD E+ +FG V +V+ ++ + D R Q +L A
Sbjct: 98 DVIEDTDIAKAEVAADFGDDVAELVDGVSKLSQIDFDSRAEAQAASLQKMLLAMTRDIRV 157
Query: 195 KLVKLADKLHNLRDIERSLP 214
L+KLAD+LHN+R ++ P
Sbjct: 158 ILIKLADRLHNMRTLDAMRP 177
>gi|255535677|ref|YP_003096048.1| GTP pyrophosphokinase [Flavobacteriaceae bacterium 3519-10]
gi|255341873|gb|ACU07986.1| GTP pyrophosphokinase [Flavobacteriaceae bacterium 3519-10]
Length = 734
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 75/136 (55%), Gaps = 14/136 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H QRRK G PYI HP+ VA I+ + LG S I ALLHD V
Sbjct: 35 IRKAFDIALDAHKDQRRK--TGEPYIYHPIEVAKIVANEIGLGATS----IACALLHDVV 88
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSHEAKLVK 198
ED+D T+E++++ FG ++ +V LT ++++++ ++L L+K
Sbjct: 89 EDSDYTYEDLKKLFGEKIADIVNGLTKISVMNHQNISIQSENYRKLLLTLSEDFRVILIK 148
Query: 199 LADKLHNLRDIERSLP 214
+AD+LHN+R +E P
Sbjct: 149 IADRLHNMRTLESMTP 164
>gi|399927237|ref|ZP_10784595.1| GTP diphosphokinase [Myroides injenensis M09-0166]
Length = 738
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 73/133 (54%), Gaps = 15/133 (11%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H QRRK G YI HP+AVA I+ LG S I +ALLHD V
Sbjct: 36 IRKAFDVAVEAHKDQRRKS--GEAYIFHPIAVAKIVASEIGLGATS----IAAALLHDVV 89
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHEAKLV 197
EDTD T ++IE+ F P++ +VE LT + H++ ++L + L+
Sbjct: 90 EDTDITVKQIEQWFNPKIAKIVEGLTKMALLEPDPHISMQAENYRKMLLTLNDDVRVILI 149
Query: 198 KLADKLHNLRDIE 210
K+AD+LHN++ +E
Sbjct: 150 KIADRLHNMQTME 162
>gi|90424134|ref|YP_532504.1| (p)ppGpp synthetase I SpoT/RelA [Rhodopseudomonas palustris BisB18]
gi|90106148|gb|ABD88185.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Rhodopseudomonas palustris BisB18]
Length = 761
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 80/139 (57%), Gaps = 11/139 (7%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++PD +++ +A +A H Q R G PY HP+ VA ILTHL K+ + I++A
Sbjct: 48 YNPDTDEDLLNRAYVYAMMAHGEQTRA--SGDPYFSHPLEVAAILTHL-KLDD-ATIVAA 103
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
LLHDT+EDT+ T EI+ FG + ++VE LT K + R+ Q +L A +
Sbjct: 104 LLHDTIEDTEATRTEIDNIFGHEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAVSND 163
Query: 192 HEAKLVKLADKLHNLRDIE 210
L+KLAD+LHN+R +E
Sbjct: 164 VRVLLIKLADRLHNMRTLE 182
>gi|386851465|ref|YP_006269478.1| GTP pyrophosphokinase [Actinoplanes sp. SE50/110]
gi|359838969|gb|AEV87410.1| GTP pyrophosphokinase [Actinoplanes sp. SE50/110]
Length = 810
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 8/135 (5%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
H + + KA D A+ H Q RK G PYI HP+AVA IL +LG + +++AL
Sbjct: 98 HPKGDVRQLQKAFDVAARWHSGQYRK--SGDPYITHPLAVATILANLGM--DTTTLVAAL 153
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEA 194
LHDT+EDTD E++ +FG V +V+ +T + + + + + A
Sbjct: 154 LHDTIEDTDYGLEQMRNDFGAEVALLVDGVTKLDRVKLGDAAKAETIRKMVVAMAKDPRV 213
Query: 195 KLVKLADKLHNLRDI 209
++KLAD+LHN+R +
Sbjct: 214 LVIKLADRLHNMRTL 228
>gi|284036528|ref|YP_003386458.1| (p)ppGpp synthetase I SpoT/RelA [Spirosoma linguale DSM 74]
gi|283815821|gb|ADB37659.1| (p)ppGpp synthetase I, SpoT/RelA [Spirosoma linguale DSM 74]
Length = 758
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 75/136 (55%), Gaps = 15/136 (11%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA + ++ H RR+ G PYI HP+AVA I LG S I++ALLHD V
Sbjct: 49 IKKAFNTSAEAHKNMRRR--SGEPYIYHPLAVAQIAVEEIGLGTTS----IVAALLHDVV 102
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHM-----TRDERKRCQILHAPHSSHEAKLVK 198
EDTDTT +I+R FGP+V +++ LT ++ ++L L+K
Sbjct: 103 EDTDTTIADIDRAFGPKVAKIIDGLTKISGFFEYGTSQQAENFRKMLLTLSDDVRVILIK 162
Query: 199 LADKLHNLRDIERSLP 214
LAD+LHN+R ++ S+P
Sbjct: 163 LADRLHNMRTLD-SMP 177
>gi|342216314|ref|ZP_08708961.1| HD domain protein [Peptoniphilus sp. oral taxon 375 str. F0436]
gi|341587204|gb|EGS30604.1| HD domain protein [Peptoniphilus sp. oral taxon 375 str. F0436]
Length = 160
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I K +FA KH Q+R G YI HP VA IL + +P I++ LLHD VEDT
Sbjct: 21 IRKGFEFAEEKHRGQKRNS--GEDYIIHPYHVALILAEMN--MDPATIVAGLLHDVVEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
D T+E+++ FG + ++V+ +T K ++ ++ Q ++ A +VKLA
Sbjct: 77 DVTYEDVKELFGEEIANLVDGVTKLKKLSYQTKQEKQAENIRKMVLAMAKDIRVIIVKLA 136
Query: 201 DKLHNLRDIE 210
D+LHNLR +E
Sbjct: 137 DRLHNLRTLE 146
>gi|404328487|ref|ZP_10968935.1| (p)ppGpp synthetase I SpoT/RelA [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 724
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA ++A H Q RK G PYI HPV VA IL +L + I+S LHD VEDT
Sbjct: 22 IKKAYEYAKKAHAGQLRK--SGEPYITHPVEVAGILVNLK--MDVTTIMSGFLHDVVEDT 77
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
T +++ EFG V +V+ +T +H ++ Q + A +VKLA
Sbjct: 78 PVTLDDVRNEFGDNVAMLVDGVTKLRHFEYSSKEDQQAENHRKMFVAMARDLRCVIVKLA 137
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R ++ T+E++ Q N ++ L R + I+ EL+ + +Y P+
Sbjct: 138 DRLHNMRTLKYM-----TKEKQIQKANETMEIFAPLANRLGISAIKWELEDISLRYLNPQ 192
Query: 259 E 259
+
Sbjct: 193 Q 193
>gi|312127055|ref|YP_003991929.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
hydrothermalis 108]
gi|311777074|gb|ADQ06560.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
hydrothermalis 108]
Length = 722
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 90/186 (48%), Gaps = 17/186 (9%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S + I I KA DFA H Q R G PYI HP+ VA IL L + I++ LL
Sbjct: 17 SEEDINLIKKAFDFAQKYHDGQARNS--GEPYIVHPLEVALILADLE--LDIASIVAGLL 72
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHE 193
HD VEDT + E++EREFG + +V+ +T + R ++L A
Sbjct: 73 HDVVEDTSASLEDVEREFGKEIADLVDGVTKLGKLEFTSKLERQAENYRKMLIAMAKDIR 132
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALF 251
L+KLAD+LHN+R ++ P E++ Q D+ L R + I+ EL+ L
Sbjct: 133 VILIKLADRLHNMRTLKYLPP-----EKQRQKAQETIDIYAPLAHRLGISKIKWELEDLS 187
Query: 252 AKYCTP 257
+Y P
Sbjct: 188 LRYLDP 193
>gi|359423647|ref|ZP_09214774.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia amarae NBRC 15530]
gi|358241005|dbj|GAB04356.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia amarae NBRC 15530]
Length = 792
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 9/135 (6%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
I + +A D A +H Q RK G PYI HP+AVA IL LG + +I+ALLHDTV
Sbjct: 81 IAKLQRAYDVADERHAGQTRK--SGDPYITHPLAVATILADLGM--DTTTLIAALLHDTV 136
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKL 199
EDT + E++E EFG V +V+ +T + + + A ++K+
Sbjct: 137 EDTGYSLEQLEAEFGAEVAHLVDGVTKLDKVALGSAAEAETIRKMIIAMARDPRVLVIKV 196
Query: 200 ADKLHNLRDIERSLP 214
AD+LHN+R + R LP
Sbjct: 197 ADRLHNMRTM-RFLP 210
>gi|390168694|ref|ZP_10220649.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Sphingobium indicum B90A]
gi|389588650|gb|EIM66690.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Sphingobium indicum B90A]
Length = 701
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A F+ KH Q+R G PY HP+ VA ILT + I++ALLHDT+EDT
Sbjct: 23 INRAYVFSVQKHGSQKR--ASGDPYFSHPIEVAGILTDFN--LDDQTIVTALLHDTIEDT 78
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHEAKLVKLA 200
T+EEIE+ FG V +V+ +L+ + M+ +ER + L A LVKLA
Sbjct: 79 LVTYEEIEQAFGKDVAKMVDGVTKLSKIEAMSENERAAENLRKFLLAMSDDIRVLLVKLA 138
Query: 201 DKLHNLRDI 209
D+LHN+R +
Sbjct: 139 DRLHNMRTL 147
>gi|419508740|ref|ZP_14048391.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49542]
gi|379610694|gb|EHZ75424.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49542]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRMIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|417918672|ref|ZP_12562222.1| RelA/SpoT family protein [Streptococcus parasanguinis SK236]
gi|342828342|gb|EGU62716.1| RelA/SpoT family protein [Streptococcus parasanguinis SK236]
Length = 739
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 10/137 (7%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP+ + + KA +A H+ Q R+ G PYI HP+ VA IL L + V + L
Sbjct: 21 SPEDVAFVQKALVYAVDCHNGQFRQ--SGEPYIIHPIQVAGILAKLK--LDAVTVACGFL 76
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHE 193
HD VEDTD T +++EREFG VR +V+ +L K+ + +E+ ++L A
Sbjct: 77 HDVVEDTDATLDDLEREFGHDVRVIVDGVTKLGKVKYKSHEEQLAENHRKMLMAMSQDIR 136
Query: 194 AKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 137 VILVKLADRLHNMRTLK 153
>gi|158423624|ref|YP_001524916.1| RelA/SpoT protein [Azorhizobium caulinodans ORS 571]
gi|158330513|dbj|BAF87998.1| RelA/SpoT protein [Azorhizobium caulinodans ORS 571]
Length = 746
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q R G PY HP+ VA ILT L K+ + I++ALLHDT+EDTD
Sbjct: 33 RAYVYAMRAHGAQVRA--SGDPYFSHPLEVAAILTDL-KLDD-ATIVAALLHDTIEDTDA 88
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EIER FG ++ +VE LT K + ++ Q +L A LVKLAD+
Sbjct: 89 TKAEIERLFGKQIADLVEGLTKIKKLDLVSKQAKQAENLRKLLLAIADDVRVLLVKLADR 148
Query: 203 LHNLRDIE 210
LHN+R ++
Sbjct: 149 LHNMRTLK 156
>gi|256375833|ref|YP_003099493.1| (p)ppGpp synthetase I SpoT/RelA [Actinosynnema mirum DSM 43827]
gi|255920136|gb|ACU35647.1| (p)ppGpp synthetase I, SpoT/RelA [Actinosynnema mirum DSM 43827]
Length = 766
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 78/139 (56%), Gaps = 10/139 (7%)
Query: 81 PDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
P+A + ++ +A D A KH QRRK G PYI HP+AVA IL LG + +++ALL
Sbjct: 57 PNADLGLLQRAYDVAEEKHRPQRRK--SGDPYITHPLAVATILAELGM--DTTTLVAALL 112
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAK 195
HDTVEDTD + +++ +FG V +V+ +T + + + A
Sbjct: 113 HDTVEDTDYSLDQLRDDFGTVVALLVDGVTKLDKVKLGAAAEAETIRKMVIAMAKDPRVL 172
Query: 196 LVKLADKLHNLRDIERSLP 214
++KLAD+LHN+R + R LP
Sbjct: 173 VIKLADRLHNMRTM-RFLP 190
>gi|419433921|ref|ZP_13974039.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA40183]
gi|379576922|gb|EHZ41846.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA40183]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|312868044|ref|ZP_07728248.1| GTP diphosphokinase [Streptococcus parasanguinis F0405]
gi|311096448|gb|EFQ54688.1| GTP diphosphokinase [Streptococcus parasanguinis F0405]
Length = 739
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 10/137 (7%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP+ + + KA +A H+ Q R+ G PYI HP+ VA IL L + V + L
Sbjct: 21 SPEDVAFVQKALVYAVDCHNGQFRQ--SGEPYIIHPIQVAGILAKLK--LDAVTVACGFL 76
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHE 193
HD VEDTD T +++EREFG VR +V+ +L K+ + +E+ ++L A
Sbjct: 77 HDVVEDTDATLDDLEREFGHDVRVIVDGVTKLGKVKYKSHEEQLAENHRKMLMAMSQDIR 136
Query: 194 AKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 137 VILVKLADRLHNMRTLK 153
>gi|148988688|ref|ZP_01820121.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP6-BS73]
gi|147925889|gb|EDK76964.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP6-BS73]
Length = 739
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRMIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|455652043|gb|EMF30724.1| kinase/phosphohydrolase [Streptomyces gancidicus BKS 13-15]
Length = 709
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 82/167 (49%), Gaps = 26/167 (15%)
Query: 64 RLGEAPDTGDSDSGMHSPDAIMNIV----------------KATDFASHKHHFQRRKDPE 107
RLG A G S + PDAI ++V +A A H Q RK
Sbjct: 36 RLGRAALLGSSSARDRLPDAIGHVVDAHRAHHPDADLEPLRRAYLLAESSHRGQMRK--S 93
Query: 108 GTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEE 167
G PYI HP+AV IL LG + + ++LLHDTVEDTD T +++ +FG VR +V+
Sbjct: 94 GEPYITHPLAVTLILAELG--AETTTLTASLLHDTVEDTDVTLDQVGEQFGEEVRYLVDG 151
Query: 168 LT-----DNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDI 209
+T D E R ++L A + +KLAD+LHN+R +
Sbjct: 152 VTKLEKVDYGAAAEPETFR-KMLVATGNDVRVMSIKLADRLHNMRTL 197
>gi|237752627|ref|ZP_04583107.1| guanosine-pyrophosphohydrolase [Helicobacter winghamensis ATCC
BAA-430]
gi|229376116|gb|EEO26207.1| guanosine-pyrophosphohydrolase [Helicobacter winghamensis ATCC
BAA-430]
Length = 715
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 75/141 (53%), Gaps = 30/141 (21%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
NI A FA+ H Q+RK G PYI HP+ VA I++H G + V++ +ALLHD VED
Sbjct: 29 NIQNAIAFATEAHKTQKRK--SGEPYIVHPLLVACIVSHFG--GDEVMVCAALLHDVVED 84
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHE------------ 193
TD T E+++R++G V S+V+ LT + +E L A HS+ +
Sbjct: 85 TDYTLEDVKRDYGEDVASLVDGLTKIVAIRAEE------LPASHSNEKLVVAALSFRKML 138
Query: 194 --------AKLVKLADKLHNL 206
+VKL D+LHN+
Sbjct: 139 ITSVKDVRVLVVKLCDRLHNM 159
>gi|408826453|ref|ZP_11211343.1| (p)ppGpp synthetase I, SpoT/RelA [Streptomyces somaliensis DSM
40738]
Length = 695
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 16/161 (9%)
Query: 79 HSPDAIMNIVK-ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PDA +++++ A + A H Q RK G PYI HP+AV IL LG + + ++
Sbjct: 53 HHPDADLDVLRRAYELAESSHRGQFRK--SGEPYITHPLAVTLILAELG--AETTTLTAS 108
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSH 192
LLHDTVEDT+ T +E+ +FG V +V+ +T D E R ++L A
Sbjct: 109 LLHDTVEDTEVTLDEVREQFGEEVAYLVDGVTKLEKVDYGAAAESETFR-KMLVATGDDV 167
Query: 193 EAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
+KLAD+LHN+R + P E++ + RDV+
Sbjct: 168 RVMSIKLADRLHNMRTLGVMRP-----EKQARIAKVTRDVL 203
>gi|419799077|ref|ZP_14324447.1| RelA/SpoT family protein [Streptococcus parasanguinis F0449]
gi|385698804|gb|EIG29147.1| RelA/SpoT family protein [Streptococcus parasanguinis F0449]
Length = 739
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 10/137 (7%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP+ + + KA +A H+ Q R+ G PYI HP+ VA IL L + V + L
Sbjct: 21 SPEDVAFVQKALVYAVDCHNGQFRQ--SGEPYIIHPIQVAGILAKLK--LDAVTVACGFL 76
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHE 193
HD VEDTD T +++EREFG VR +V+ +L K+ + +E+ ++L A
Sbjct: 77 HDVVEDTDATLDDLEREFGHDVRVIVDGVTKLGKVKYKSHEEQLAENHRKMLMAMSQDIR 136
Query: 194 AKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 137 VILVKLADRLHNMRTLK 153
>gi|345848836|ref|ZP_08801854.1| guanosine tetraphosphate (ppGpp) metabolism protein [Streptomyces
zinciresistens K42]
gi|345639706|gb|EGX61195.1| guanosine tetraphosphate (ppGpp) metabolism protein [Streptomyces
zinciresistens K42]
Length = 699
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 79 HSPDAIMN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PDA + + +A A H Q RK G PYI HP+AV IL LG + + ++
Sbjct: 43 HHPDAALEPLRRAYVLAESSHRGQMRK--SGEPYITHPLAVTLILAELG--AETTTLTAS 98
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSH 192
LLHDTVEDTD T +++ EFG VR +V+ +T D E R ++L + +
Sbjct: 99 LLHDTVEDTDVTLDQVREEFGEEVRFLVDGVTKLEKVDYGAAAEPETFR-KMLVSTGNDV 157
Query: 193 EAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
+KLAD+LHN+R + P E++ + RDV+
Sbjct: 158 RVMSIKLADRLHNMRTLGVMRP-----EKQARIAKVTRDVL 193
>gi|322390790|ref|ZP_08064300.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 903]
gi|321142460|gb|EFX37928.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 903]
Length = 739
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 77/137 (56%), Gaps = 10/137 (7%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP+ + + KA +A H+ Q R+ G PYI HP+ VA IL L + V + L
Sbjct: 21 SPEDVAFVQKALVYAVDCHNGQFRQ--SGEPYIIHPIQVAGILAKLK--LDAVTVACGFL 76
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHE 193
HD VEDTD T +++EREFG VR +V+ +L K+ + +E+ ++L A
Sbjct: 77 HDVVEDTDATLDDLEREFGHDVRVIVDGVTKLGKVKYKSHEEQLAENHRKMLMAMSQDIR 136
Query: 194 AKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 137 VILVKLADRLHNMRTLK 153
>gi|354616924|ref|ZP_09034463.1| (p)ppGpp synthetase I, SpoT/RelA [Saccharomonospora paurometabolica
YIM 90007]
gi|353218722|gb|EHB83422.1| (p)ppGpp synthetase I, SpoT/RelA [Saccharomonospora paurometabolica
YIM 90007]
Length = 778
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 10/139 (7%)
Query: 81 PDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
P A + ++ +A D A +H QRRK G PYI HP+AVA IL LG + +++ALL
Sbjct: 68 PSADLTLLQRAYDVAEERHREQRRK--SGDPYITHPLAVATILAELGM--DTTTLVAALL 123
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAK 195
HDTVEDT + E++ +FG +V +V+ +T + + + A
Sbjct: 124 HDTVEDTGYSLEQLGEDFGEKVSQLVDGVTKLDKVKLGTAAEAETIRKMVIAMARDPRVL 183
Query: 196 LVKLADKLHNLRDIERSLP 214
++KLAD+LHN+R + R LP
Sbjct: 184 VIKLADRLHNMRTM-RFLP 201
>gi|343521362|ref|ZP_08758330.1| RelA/SpoT family protein [Parvimonas sp. oral taxon 393 str. F0440]
gi|343396568|gb|EGV09105.1| RelA/SpoT family protein [Parvimonas sp. oral taxon 393 str. F0440]
Length = 717
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 11/139 (7%)
Query: 79 HSPDA-IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++P+A + I KA +F H Q R G PY HPVAVA+IL L + II+
Sbjct: 12 YNPNADVEKITKAYNFTKECHEGQFRN--SGEPYFIHPVAVANILADL--YMDDATIIAG 67
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
L+HD +EDT+ TFE++ F + ++V+ +T K + ++ Q +L A +S
Sbjct: 68 LMHDILEDTEVTFEQMAEMFDEEIANLVDGVTKLKKIKYQSKQESQADNLRKMLLAMNSD 127
Query: 192 HEAKLVKLADKLHNLRDIE 210
++K+AD+LHN+R +E
Sbjct: 128 IRVIIIKIADRLHNIRTLE 146
>gi|291615670|ref|YP_003518412.1| SpoT [Pantoea ananatis LMG 20103]
gi|378769265|ref|YP_005197740.1| metal dependent phosphohydrolase [Pantoea ananatis LMG 5342]
gi|386017854|ref|YP_005936155.1| GTP pyrophosphokinase SpoT [Pantoea ananatis AJ13355]
gi|386081339|ref|YP_005994864.1| GTP pyrophosphokinase SpoT [Pantoea ananatis PA13]
gi|291150700|gb|ADD75284.1| SpoT [Pantoea ananatis LMG 20103]
gi|327395937|dbj|BAK13359.1| GTP pyrophosphokinase SpoT [Pantoea ananatis AJ13355]
gi|354990520|gb|AER34644.1| GTP pyrophosphokinase SpoT [Pantoea ananatis PA13]
gi|365188753|emb|CCF11703.1| metal dependent phosphohydrolase [Pantoea ananatis LMG 5342]
Length = 197
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 95 SHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIE 154
+H QRRK + PYI HP AV ++ + NPV++ +A LHDTVEDT TT +I+
Sbjct: 16 AHAETGQRRKYTD-EPYIVHPAAVVELVRSI--TDNPVMLAAAWLHDTVEDTATTLNDIQ 72
Query: 155 REFGPRVRSVVEELTDNKHMT---RDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIER 211
FG V +VE LT+ + R RK H +S EA+ +KLAD + N R I R
Sbjct: 73 THFGDEVAKLVEMLTNTAPQSAKNRAARKVADFRHTAQASPEAQTIKLADIIDNTRSIVR 132
Query: 212 SLP 214
P
Sbjct: 133 FDP 135
>gi|15901481|ref|NP_346085.1| GTP pyrophosphokinase [Streptococcus pneumoniae TIGR4]
gi|149011496|ref|ZP_01832743.1| thiol peroxidase [Streptococcus pneumoniae SP19-BS75]
gi|182684588|ref|YP_001836335.1| GTP pyrophosphokinase [Streptococcus pneumoniae CGSP14]
gi|303255968|ref|ZP_07341996.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS455]
gi|387759759|ref|YP_006066737.1| GTP pyrophosphokinase [Streptococcus pneumoniae INV200]
gi|419515152|ref|ZP_14054777.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae England14-9]
gi|419523854|ref|ZP_14063429.1| relA/SpoT family protein [Streptococcus pneumoniae GA13723]
gi|421247913|ref|ZP_15704392.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2082170]
gi|421268804|ref|ZP_15719673.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR95]
gi|14973135|gb|AAK75725.1| GTP pyrophosphokinase [Streptococcus pneumoniae TIGR4]
gi|147764486|gb|EDK71417.1| thiol peroxidase [Streptococcus pneumoniae SP19-BS75]
gi|182629922|gb|ACB90870.1| GTP pyrophosphokinase [Streptococcus pneumoniae CGSP14]
gi|301802348|emb|CBW35102.1| GTP pyrophosphokinase [Streptococcus pneumoniae INV200]
gi|302597027|gb|EFL64145.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS455]
gi|379556262|gb|EHZ21317.1| relA/SpoT family protein [Streptococcus pneumoniae GA13723]
gi|379635701|gb|EIA00260.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae England14-9]
gi|395612929|gb|EJG72962.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2082170]
gi|395869058|gb|EJG80174.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR95]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRMIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|357043992|ref|ZP_09105677.1| hypothetical protein HMPREF9138_02149 [Prevotella histicola F0411]
gi|355367849|gb|EHG15276.1| hypothetical protein HMPREF9138_02149 [Prevotella histicola F0411]
Length = 765
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA H RR G PYI HP+AVA I LG S I SALLHD V
Sbjct: 42 ITKAFNFARQAHKGVRR--LSGEPYIMHPIAVAQIACEEMGLGATS----ICSALLHDVV 95
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FGP++ +V+ LT E+ Q +L L+
Sbjct: 96 EDTDYTVEDIENIFGPKIAQIVDGLTKISGGIFGEQASAQAENFKKLLLTMSDDIRVILI 155
Query: 198 KLADKLHNLRDIERSLPVN 216
K+ D+LHN+R + S P N
Sbjct: 156 KICDRLHNMRTLA-SQPAN 173
>gi|389722378|ref|ZP_10189023.1| RelA/SpoT family (p)ppGpp synthetase [Rhodanobacter sp. 115]
gi|388442078|gb|EIL98297.1| RelA/SpoT family (p)ppGpp synthetase [Rhodanobacter sp. 115]
Length = 720
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
I +++A + +H H Q RK G PYI HPVAVA IL LG + II+A+LHDT+
Sbjct: 33 IERVLRAYEVGAHAHEGQARKS--GEPYITHPVAVAGILAELGM--DAETIIAAILHDTL 88
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRC------QILHAPHSSHEAKLV 197
EDT+ + + EFG V +V+ +T M R+ ++L A L+
Sbjct: 89 EDTELSRSALASEFGETVAELVDGVTKLDKMKFGSRQEADAESFRKMLLAMARDLRVILI 148
Query: 198 KLADKLHNLRDI 209
KL+D+LHN+R +
Sbjct: 149 KLSDRLHNMRTL 160
>gi|417850258|ref|ZP_12496169.1| GTP diphosphokinase [Streptococcus mitis SK1080]
gi|339452940|gb|EGP65558.1| GTP diphosphokinase [Streptococcus mitis SK1080]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALIYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELT---DNKHMTRDER---KRCQILHAPHSSHEAKLVKLADK 202
T +++EREFGP VR +V+ +T K+ + +E+ ++L A LVKL+D+
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVKYKSHEEQLAENHRKMLMAMSEDIRVILVKLSDR 145
Query: 203 LHNLRDIE 210
LHN+R ++
Sbjct: 146 LHNMRTLK 153
>gi|225861474|ref|YP_002742983.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae Taiwan19F-14]
gi|417313123|ref|ZP_12099835.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA04375]
gi|418094436|ref|ZP_12731563.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49138]
gi|418142159|ref|ZP_12778972.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13455]
gi|418153383|ref|ZP_12790121.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16121]
gi|418157938|ref|ZP_12794654.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16833]
gi|418228152|ref|ZP_12854769.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 3063-00]
gi|419438683|ref|ZP_13978751.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13499]
gi|419480488|ref|ZP_14020293.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19101]
gi|419500190|ref|ZP_14039884.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47597]
gi|419502297|ref|ZP_14041981.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47628]
gi|419519357|ref|ZP_14058963.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA08825]
gi|419527982|ref|ZP_14067525.1| relA/SpoT family protein [Streptococcus pneumoniae GA17719]
gi|225728365|gb|ACO24216.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae Taiwan19F-14]
gi|327389831|gb|EGE88176.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA04375]
gi|353764932|gb|EHD45480.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49138]
gi|353806410|gb|EHD86684.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13455]
gi|353816934|gb|EHD97142.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16121]
gi|353824386|gb|EHE04560.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16833]
gi|353880547|gb|EHE60362.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 3063-00]
gi|379537090|gb|EHZ02275.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13499]
gi|379566135|gb|EHZ31126.1| relA/SpoT family protein [Streptococcus pneumoniae GA17719]
gi|379570442|gb|EHZ35406.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19101]
gi|379599498|gb|EHZ64281.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47597]
gi|379600510|gb|EHZ65291.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47628]
gi|379641194|gb|EIA05732.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA08825]
gi|429316493|emb|CCP36199.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPN034156]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRMIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|405760481|ref|YP_006701077.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPNA45]
gi|404277370|emb|CCM07883.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPNA45]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|418076861|ref|ZP_12714094.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47502]
gi|353747001|gb|EHD27659.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47502]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALIYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRMIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|307707439|ref|ZP_07643921.1| GTP pyrophosphokinase [Streptococcus mitis NCTC 12261]
gi|307616391|gb|EFN95582.1| GTP pyrophosphokinase [Streptococcus mitis NCTC 12261]
Length = 716
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 6 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 61
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHEAKLVKLADK 202
T +++EREFGP VR +V+ +L K+ + +E+ ++L A LVKL+D+
Sbjct: 62 TLDDLEREFGPDVRVIVDGVTKLGKVKYKSHEEQLAENHRKMLMAMSEDIRVILVKLSDR 121
Query: 203 LHNLRDIE 210
LHN+R ++
Sbjct: 122 LHNMRTLK 129
>gi|418149006|ref|ZP_12785768.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13856]
gi|419530670|ref|ZP_14070197.1| relA/SpoT family protein [Streptococcus pneumoniae GA40028]
gi|353811342|gb|EHD91584.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13856]
gi|379573578|gb|EHZ38533.1| relA/SpoT family protein [Streptococcus pneumoniae GA40028]
Length = 736
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 26 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 81
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 82 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 138
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 139 SDRLHNMRTLK 149
>gi|395776010|ref|ZP_10456525.1| ppGpp synthetase/hydrolase [Streptomyces acidiscabies 84-104]
Length = 718
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 91/191 (47%), Gaps = 32/191 (16%)
Query: 64 RLGEAPDTGDSDSGMHSPDAIMNIV----------------KATDFASHKHHFQRRKDPE 107
RLG A G + G PDAI ++V +A A H Q RK
Sbjct: 31 RLGRAAFLGPAGRG-RLPDAIGHVVEAHRAHHPEADLEPLHRAYVLAESSHRGQMRKS-- 87
Query: 108 GTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEE 167
G PYI HP+AV IL LG + + ++LLHDTVEDTD T +++ +FG VR +V+
Sbjct: 88 GEPYITHPLAVTLILAELG--AETTTLTASLLHDTVEDTDVTLDQVREQFGEEVRYLVDG 145
Query: 168 LT-----DNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERK 222
+T D E R ++L A S +KLAD+LHN+R + P E++
Sbjct: 146 VTKLEKVDYGAAAEPETFR-KMLVATGSDVRVMSIKLADRLHNMRTLGVMRP-----EKQ 199
Query: 223 TQYFNWARDVV 233
+ RDV+
Sbjct: 200 ARIAKVTRDVL 210
>gi|320534396|ref|ZP_08034880.1| GTP diphosphokinase [Actinomyces sp. oral taxon 171 str. F0337]
gi|320133395|gb|EFW25859.1| GTP diphosphokinase [Actinomyces sp. oral taxon 171 str. F0337]
Length = 774
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
IV+A + A H QRRK G PYI HPVAVA IL LG + + +A+LHDTVEDT
Sbjct: 58 IVRAYEVAEKAHSGQRRK--SGEPYITHPVAVATILAELGMTAQ--TLAAAVLHDTVEDT 113
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ----ILHAPHSSHEAKLVKLADK 202
D T E + +FG + +V+ +T + E + + ++ A ++KL D+
Sbjct: 114 DYTLERLRADFGDEISLLVDGVTKLDKLQYGEAAQAETVRKMIIAMSKDIRVLVIKLGDR 173
Query: 203 LHNLR 207
LHN R
Sbjct: 174 LHNAR 178
>gi|313150268|dbj|BAJ39892.1| ppGpp synthetase [Actinoplanes teichomyceticus]
Length = 821
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 8/130 (6%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ + KA D A+ H Q RK G PYI HP+AVA IL +LG + +++ALLHDT+
Sbjct: 114 VRQLQKAFDVAARWHSGQYRK--SGDPYITHPLAVATILANLGM--DTTTLVAALLHDTI 169
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKL 199
EDTD E++ +FG V +V+ +T + + + + + A ++KL
Sbjct: 170 EDTDYGLEQMRNDFGAEVALLVDGVTKLDRVKLGDAAKAETIRKMVVAMAKDPRVLVIKL 229
Query: 200 ADKLHNLRDI 209
AD+LHN+R +
Sbjct: 230 ADRLHNMRTL 239
>gi|157150146|ref|YP_001451091.1| GTP diphosphokinase [Streptococcus gordonii str. Challis substr.
CH1]
gi|157074940|gb|ABV09623.1| GTP diphosphokinase [Streptococcus gordonii str. Challis substr.
CH1]
Length = 738
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 71/133 (53%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDT
Sbjct: 28 VQKALVYAVDCHSGQFRKS--GEPYIVHPIQVAGILAKLK--LDAVTVACGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLV 197
D +++EREFGP VR++V+ +T + + + RK +L A LV
Sbjct: 84 DAGLDDLEREFGPDVRTIVDGVTKLGKVKYKSHEEQLAENHRK---MLMAMSEDIRVILV 140
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 141 KLADRLHNMRTLK 153
>gi|381187653|ref|ZP_09895216.1| GTP pyrophosphokinase [Flavobacterium frigoris PS1]
gi|379650399|gb|EIA08971.1| GTP pyrophosphokinase [Flavobacterium frigoris PS1]
Length = 739
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 72/133 (54%), Gaps = 15/133 (11%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H QRRK G YI HP+AVA I+ LG S I +ALLHD V
Sbjct: 36 IRKAFDVAVEAHKEQRRK--SGEAYIFHPIAVAKIVASEIGLGATS----IAAALLHDVV 89
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDT TT ++IER F P+V +VE LT + +D Q +L + L+
Sbjct: 90 EDTPTTVKDIERIFNPKVAQLVEGLTKISLVQKDMNVSMQAENFRKMLLTLNDDVRVILI 149
Query: 198 KLADKLHNLRDIE 210
K+AD+LHN++ +E
Sbjct: 150 KIADRLHNMQTME 162
>gi|290956960|ref|YP_003488142.1| guanosine tetraphosphate (ppGpp) metabolism protein [Streptomyces
scabiei 87.22]
gi|260646486|emb|CBG69583.1| putative guanosine tetraphosphate (ppGpp) metabolism protein
[Streptomyces scabiei 87.22]
Length = 671
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 74/137 (54%), Gaps = 11/137 (8%)
Query: 79 HSPDAIMN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PDA + + +A A H Q RK G PYI HP+AV IL LG + + ++
Sbjct: 15 HHPDADLEPLRRAYVLAESSHRGQMRKS--GEPYITHPLAVTLILAELG--AETTTLTAS 70
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSH 192
LLHDTVEDTD T +++ EFG VR +V+ +T D E R ++L A +
Sbjct: 71 LLHDTVEDTDVTLDQVREEFGEEVRYIVDGVTKLEKVDYGAAAEPETFR-KMLVATGNDV 129
Query: 193 EAKLVKLADKLHNLRDI 209
+KLAD+LHN+R +
Sbjct: 130 RVMSIKLADRLHNMRTL 146
>gi|395785981|ref|ZP_10465709.1| GTP pyrophosphokinase rsh [Bartonella tamiae Th239]
gi|423717125|ref|ZP_17691315.1| GTP pyrophosphokinase rsh [Bartonella tamiae Th307]
gi|395424439|gb|EJF90626.1| GTP pyrophosphokinase rsh [Bartonella tamiae Th239]
gi|395427914|gb|EJF93997.1| GTP pyrophosphokinase rsh [Bartonella tamiae Th307]
Length = 742
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 75/140 (53%), Gaps = 15/140 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT + + I
Sbjct: 14 YKPDVNEALLN--KAYIYAMKKHRDQKR--ATGDPYFSHPLEVAAILTDMR--LDEATIA 67
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT+ T EI++ FG + +VE LT K + +K Q +L A
Sbjct: 68 VALLHDTIEDTNATRAEIDQIFGSEIGQLVEGLTKLKKLDLVSKKAVQAENLRKLLIAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHNLR +
Sbjct: 128 QDVRVLLVKLADRLHNLRTL 147
>gi|317505220|ref|ZP_07963152.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prevotella salivae DSM 15606]
gi|315663649|gb|EFV03384.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prevotella salivae DSM 15606]
Length = 760
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA H RR G PYI HP+AVA I LG S I +ALLHD V
Sbjct: 42 ITKAFNFARQAHKGVRR--LSGEPYIMHPIAVAQIACEEMGLGSTS----ICAALLHDVV 95
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E+IE FG ++ +V+ LT ER Q +L L+
Sbjct: 96 EDTDYTVEDIENIFGKKIAQIVDGLTKISGGIFGERASAQAENFKKLLLTMSDDIRVILI 155
Query: 198 KLADKLHNLRDIERSLPVN 216
K+ D+LHN+R +E S P N
Sbjct: 156 KICDRLHNMRTLE-SQPAN 173
>gi|417687089|ref|ZP_12336363.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41301]
gi|418160348|ref|ZP_12797047.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17227]
gi|419521575|ref|ZP_14061170.1| relA/SpoT family protein [Streptococcus pneumoniae GA05245]
gi|332073979|gb|EGI84457.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41301]
gi|353822081|gb|EHE02257.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17227]
gi|379538875|gb|EHZ04055.1| relA/SpoT family protein [Streptococcus pneumoniae GA05245]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRMIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|322377400|ref|ZP_08051891.1| GTP pyrophosphokinase [Streptococcus sp. M334]
gi|417846678|ref|ZP_12492671.1| GTP diphosphokinase [Streptococcus mitis SK1073]
gi|321281600|gb|EFX58609.1| GTP pyrophosphokinase [Streptococcus sp. M334]
gi|339458311|gb|EGP70854.1| GTP diphosphokinase [Streptococcus mitis SK1073]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELT---DNKHMTRDER---KRCQILHAPHSSHEAKLVKLADK 202
T +++EREFGP VR +V+ +T K+ + +E+ ++L A LVKL+D+
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVKYKSHEEQLAENHRKMLMAMSEDIRVILVKLSDR 145
Query: 203 LHNLRDIE 210
LHN+R ++
Sbjct: 146 LHNMRTLK 153
>gi|15903530|ref|NP_359080.1| GTP pyrophosphokinase [Streptococcus pneumoniae R6]
gi|116516708|ref|YP_816914.1| GTP pyrophosphokinase [Streptococcus pneumoniae D39]
gi|148994885|ref|ZP_01823906.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP9-BS68]
gi|168488644|ref|ZP_02712843.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae SP195]
gi|225857262|ref|YP_002738773.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae P1031]
gi|387626842|ref|YP_006063018.1| GTP pyrophosphokinase [Streptococcus pneumoniae INV104]
gi|417679609|ref|ZP_12329005.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17570]
gi|418087321|ref|ZP_12724490.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47033]
gi|418126295|ref|ZP_12763201.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44511]
gi|418130789|ref|ZP_12767672.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA07643]
gi|418146887|ref|ZP_12783665.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13637]
gi|418167244|ref|ZP_12803899.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17971]
gi|418187624|ref|ZP_12824147.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47360]
gi|418192081|ref|ZP_12828583.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47388]
gi|418202856|ref|ZP_12839285.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA52306]
gi|418214838|ref|ZP_12841572.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA54644]
gi|418230417|ref|ZP_12857016.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP01]
gi|418234842|ref|ZP_12861418.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA08780]
gi|419443000|ref|ZP_13983027.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13224]
gi|419455996|ref|ZP_13995953.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP04]
gi|419478281|ref|ZP_14018105.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA18068]
gi|419484873|ref|ZP_14024648.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43257]
gi|419493772|ref|ZP_14033497.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47210]
gi|421218270|ref|ZP_15675164.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070335]
gi|421220732|ref|ZP_15677571.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070425]
gi|421222984|ref|ZP_15679766.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070531]
gi|421227823|ref|ZP_15684525.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2072047]
gi|421236736|ref|ZP_15693333.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2071004]
gi|421243571|ref|ZP_15700084.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2081074]
gi|421266635|ref|ZP_15717515.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR27]
gi|421271053|ref|ZP_15721907.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR48]
gi|421279420|ref|ZP_15730226.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17301]
gi|421285880|ref|ZP_15736656.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA60190]
gi|421294842|ref|ZP_15745563.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA56113]
gi|421301499|ref|ZP_15752169.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA19998]
gi|444382813|ref|ZP_21181012.1| GTP diphosphokinase [Streptococcus pneumoniae PCS8106]
gi|444385762|ref|ZP_21183833.1| GTP diphosphokinase [Streptococcus pneumoniae PCS8203]
gi|444409163|ref|ZP_21205761.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0076]
gi|444412787|ref|ZP_21209106.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0153]
gi|444414527|ref|ZP_21210784.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0199]
gi|444422019|ref|ZP_21217684.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0446]
gi|15459146|gb|AAL00291.1| GTP pyrophosphokinase [Streptococcus pneumoniae R6]
gi|116077284|gb|ABJ55004.1| GTP pyrophosphokinase [Streptococcus pneumoniae D39]
gi|147926953|gb|EDK77998.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP9-BS68]
gi|183572878|gb|EDT93406.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae SP195]
gi|225725767|gb|ACO21619.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae P1031]
gi|301794628|emb|CBW37078.1| GTP pyrophosphokinase [Streptococcus pneumoniae INV104]
gi|332072474|gb|EGI82957.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17570]
gi|353758337|gb|EHD38929.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47033]
gi|353796235|gb|EHD76580.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44511]
gi|353802113|gb|EHD82413.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA07643]
gi|353812462|gb|EHD92697.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13637]
gi|353829236|gb|EHE09370.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17971]
gi|353849609|gb|EHE29614.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47360]
gi|353855167|gb|EHE35137.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47388]
gi|353867413|gb|EHE47308.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA52306]
gi|353869568|gb|EHE49449.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA54644]
gi|353885298|gb|EHE65087.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP01]
gi|353886464|gb|EHE66246.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA08780]
gi|379551700|gb|EHZ16794.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13224]
gi|379565717|gb|EHZ30709.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA18068]
gi|379581626|gb|EHZ46510.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43257]
gi|379592345|gb|EHZ57161.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47210]
gi|379627972|gb|EHZ92578.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP04]
gi|395583039|gb|EJG43488.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070335]
gi|395586642|gb|EJG47009.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070425]
gi|395586964|gb|EJG47326.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070531]
gi|395594107|gb|EJG54347.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2072047]
gi|395601499|gb|EJG61646.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2071004]
gi|395606576|gb|EJG66680.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2081074]
gi|395866703|gb|EJG77831.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR27]
gi|395867267|gb|EJG78391.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR48]
gi|395878913|gb|EJG89975.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17301]
gi|395885867|gb|EJG96888.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA60190]
gi|395893411|gb|EJH04398.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA56113]
gi|395899059|gb|EJH10003.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA19998]
gi|444249440|gb|ELU55931.1| GTP diphosphokinase [Streptococcus pneumoniae PCS8203]
gi|444251182|gb|ELU57654.1| GTP diphosphokinase [Streptococcus pneumoniae PCS8106]
gi|444274026|gb|ELU79681.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0153]
gi|444280088|gb|ELU85464.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0076]
gi|444281669|gb|ELU86977.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0199]
gi|444288643|gb|ELU93534.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0446]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRMIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|404485158|ref|ZP_11020357.1| RelA/SpoT family protein [Barnesiella intestinihominis YIT 11860]
gi|404338945|gb|EJZ65388.1| RelA/SpoT family protein [Barnesiella intestinihominis YIT 11860]
Length = 747
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 72/137 (52%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I +A FA H RR+ G PYI HP+AVA I++ LG S I SALLHD V
Sbjct: 38 IERAFKFAKEAHKGIRRRS--GEPYILHPIAVARIVSQEIGLGSTS----ICSALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDT+ T E+IE FG ++ S+V+ LT ++ Q +L L+
Sbjct: 92 EDTEYTVEDIENHFGKKIASIVDGLTKISGGIFGDQASAQAENFRRLLLTMSEDIRVILI 151
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 152 KMADRLHNMRTLGSMLP 168
>gi|421234533|ref|ZP_15691151.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2061617]
gi|395600387|gb|EJG60544.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2061617]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|387788694|ref|YP_006253762.1| GTP pyrophosphokinase [Streptococcus pneumoniae ST556]
gi|379138436|gb|AFC95227.1| GTP pyrophosphokinase [Streptococcus pneumoniae ST556]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|303258573|ref|ZP_07344553.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP-BS293]
gi|303262660|ref|ZP_07348600.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP14-BS292]
gi|303263601|ref|ZP_07349523.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS397]
gi|303266361|ref|ZP_07352250.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS457]
gi|303268234|ref|ZP_07354032.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS458]
gi|418139970|ref|ZP_12776795.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13338]
gi|418181000|ref|ZP_12817569.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41688]
gi|418189879|ref|ZP_12826391.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47373]
gi|421296479|ref|ZP_15747188.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA58581]
gi|302636216|gb|EFL66711.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP14-BS292]
gi|302640074|gb|EFL70529.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP-BS293]
gi|302642185|gb|EFL72534.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS458]
gi|302644061|gb|EFL74319.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS457]
gi|302646639|gb|EFL76864.1| GTP pyrophosphokinase [Streptococcus pneumoniae BS397]
gi|353843072|gb|EHE23117.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41688]
gi|353853606|gb|EHE33587.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47373]
gi|353904749|gb|EHE80199.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13338]
gi|395895352|gb|EJH06327.1| GTP pyrophosphokinase [Streptococcus pneumoniae GA58581]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|167771535|ref|ZP_02443588.1| hypothetical protein ANACOL_02905 [Anaerotruncus colihominis DSM
17241]
gi|167666175|gb|EDS10305.1| RelA/SpoT family protein [Anaerotruncus colihominis DSM 17241]
Length = 728
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 71/130 (54%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I+ A A+ H+ Q R G PYI HP+AVA IL LG S I +ALLHD VEDT
Sbjct: 25 IMAAYQLANDAHNGQCR--VSGEPYISHPIAVAIILVDLGMDSE--CIQAALLHDVVEDT 80
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
D T E +E++FG V +V +T ++ R+ Q +L A ++KLA
Sbjct: 81 DITSEAVEKQFGTDVALLVNGVTKLGKISFTSREEQQAENVRKMLLAMAQDVRVIIIKLA 140
Query: 201 DKLHNLRDIE 210
D+LHN+R IE
Sbjct: 141 DRLHNMRTIE 150
>gi|343522632|ref|ZP_08759598.1| GTP diphosphokinase [Actinomyces sp. oral taxon 175 str. F0384]
gi|343402041|gb|EGV14547.1| GTP diphosphokinase [Actinomyces sp. oral taxon 175 str. F0384]
Length = 774
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
IV+A + A H QRRK G PYI HPVAVA IL LG + + +A+LHDTVEDT
Sbjct: 58 IVRAYEVAEKAHSGQRRK--SGEPYITHPVAVATILAELGMTAQ--TLAAAVLHDTVEDT 113
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ----ILHAPHSSHEAKLVKLADK 202
D T E + +FG + +V+ +T + E + + ++ A ++KL D+
Sbjct: 114 DYTLERLRADFGDEISLLVDGVTKLDKLQYGEAAQAETVRKMIIAMSKDIRVLVIKLGDR 173
Query: 203 LHNLR 207
LHN R
Sbjct: 174 LHNAR 178
>gi|260432750|ref|ZP_05786721.1| GTP pyrophosphokinase [Silicibacter lacuscaerulensis ITI-1157]
gi|260416578|gb|EEX09837.1| GTP pyrophosphokinase [Silicibacter lacuscaerulensis ITI-1157]
Length = 710
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 91/185 (49%), Gaps = 18/185 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A +F H Q R G PY HPVAVA ILT + + II+ALLHDT+EDT
Sbjct: 23 ITRAYEFGKQMHEGQFRH--SGEPYFSHPVAVAAILTE--QRLDDATIITALLHDTIEDT 78
Query: 147 DTTFEEIEREFGPRVRSVVEELTD--NKHMTRDERKRCQ----ILHAPHSSHEAKLVKLA 200
++ +I FG V +V+ +T N ++ E K+ + + A LVKLA
Sbjct: 79 KASYSKIAELFGDEVAMLVDGVTKLTNLQLSSRETKQAENFRKLFMAMSKDLRVILVKLA 138
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAP--IEAELDALFAKYCTPR 258
D+LHN+R I+ P E++ Q D+ L G + EL+ L + P
Sbjct: 139 DRLHNMRTIKAMRP-----EKQVQKARETMDIYAPLAGRMGMQWMREELEDLAFRVLNP- 192
Query: 259 EGREN 263
EGR++
Sbjct: 193 EGRQS 197
>gi|456387701|gb|EMF53191.1| guanosine tetraphosphate (ppGpp) metabolism protein [Streptomyces
bottropensis ATCC 25435]
Length = 671
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 74/137 (54%), Gaps = 11/137 (8%)
Query: 79 HSPDAIMN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PDA + + +A A H Q RK G PYI HP+AV IL LG + + ++
Sbjct: 15 HHPDADLEPLRRAYVLAESSHRGQMRK--SGEPYITHPLAVTLILAELG--AETTTLTAS 70
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSH 192
LLHDTVEDTD T +++ EFG VR +V+ +T D E R ++L A +
Sbjct: 71 LLHDTVEDTDVTLDQVREEFGEEVRYIVDGVTKLEKVDYGAAAEPETFR-KMLVATGNDV 129
Query: 193 EAKLVKLADKLHNLRDI 209
+KLAD+LHN+R +
Sbjct: 130 RVMSIKLADRLHNMRTL 146
>gi|404214823|ref|YP_006669018.1| GDP pyrophosphokinase / GTP pyrophosphokinase/
guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
[Gordonia sp. KTR9]
gi|403645622|gb|AFR48862.1| GDP pyrophosphokinase / GTP pyrophosphokinase/
guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
[Gordonia sp. KTR9]
Length = 793
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A D A +H Q+RK G PYI HP+AVA IL LG + +I+ALLHDTVEDT
Sbjct: 89 RAYDVADERHSGQKRK--SGDPYITHPLAVATILADLGM--DTTTLIAALLHDTVEDTGY 144
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLH 204
+ + +E +FGP V +V+ +T + + + A ++K+AD+LH
Sbjct: 145 SLQALEADFGPEVAHLVDGVTKLDKVALGSAAEAETIRKMIIAMARDPRVLVIKVADRLH 204
Query: 205 NLRDIERSLP 214
N+R + R LP
Sbjct: 205 NMRTM-RFLP 213
>gi|402850133|ref|ZP_10898344.1| GTP pyrophosphokinase [Rhodovulum sp. PH10]
gi|402499575|gb|EJW11276.1| GTP pyrophosphokinase [Rhodovulum sp. PH10]
Length = 766
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 72/127 (56%), Gaps = 10/127 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q+R G PY HP+ VA ILT L K+ + I++ALLHDT+EDTD
Sbjct: 59 QAYVYAMKAHGEQKRA--SGDPYFSHPLEVAAILTDL-KLDDST-IVAALLHDTIEDTDA 114
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T +I+R FGP + +VE LT K + R+ Q +L A LVKLAD+
Sbjct: 115 TRTDIDRIFGPDIGHLVEGLTKLKKLELVSREAKQAENLRKLLLAIAEDVRVLLVKLADR 174
Query: 203 LHNLRDI 209
LHN+R +
Sbjct: 175 LHNMRTL 181
>gi|418966746|ref|ZP_13518464.1| RelA/SpoT family protein [Streptococcus mitis SK616]
gi|383346547|gb|EID24579.1| RelA/SpoT family protein [Streptococcus mitis SK616]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELT---DNKHMTRDER---KRCQILHAPHSSHEAKLVKLADK 202
T +++EREFGP VR +V+ +T K+ + +E+ ++L A LVKL+D+
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVKYKSHEEQLAENHRKMLMAMSEDIRVILVKLSDR 145
Query: 203 LHNLRDIE 210
LHN+R ++
Sbjct: 146 LHNMRTLK 153
>gi|365845122|ref|ZP_09385918.1| putative GTP diphosphokinase [Flavonifractor plautii ATCC 29863]
gi|364561841|gb|EHM39718.1| putative GTP diphosphokinase [Flavonifractor plautii ATCC 29863]
Length = 737
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 77/130 (59%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ +A +A + H Q RKD G+PYI HP+AVA I+ L ++ II+ALLHD +EDT
Sbjct: 27 LFRAFTYADNAHAGQLRKD--GSPYITHPLAVAEIVAELELDTDS--IIAALLHDCIEDT 82
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
T EEI + FG V +VE +LT ++ +++E + ++L A L+K+
Sbjct: 83 GATHEEIAKLFGATVADLVEGVTKLTRVQYTSKEEEQMENLRKMLMAMAKDIRVILIKIC 142
Query: 201 DKLHNLRDIE 210
D+LHN+R +E
Sbjct: 143 DRLHNMRTME 152
>gi|319937500|ref|ZP_08011905.1| GTP pyrophosphokinase [Coprobacillus sp. 29_1]
gi|319807340|gb|EFW03949.1| GTP pyrophosphokinase [Coprobacillus sp. 29_1]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 76/140 (54%), Gaps = 10/140 (7%)
Query: 81 PDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLH 140
P++I I KA DF KH Q+RK G PY H + VA+IL+ L + P+ I + LLH
Sbjct: 27 PESIDLIKKAYDFIMVKHEGQKRK--SGEPYTIHLIWVAYILSTLE--TGPITIAAGLLH 82
Query: 141 DTVEDTDTTFEEIEREFGPRVRSVVEELTD-NKHMTRDE-----RKRCQILHAPHSSHEA 194
D +ED D + EE+ FG + ++VE +T NK +DE +I A
Sbjct: 83 DVMEDCDVSHEEMVERFGEEITTLVEGVTKINKMPFKDEADVYAENHRKIYIAMAKDIRV 142
Query: 195 KLVKLADKLHNLRDIERSLP 214
L+KLAD+LHN+R +E P
Sbjct: 143 ILIKLADRLHNMRTLEYMRP 162
>gi|307127856|ref|YP_003879887.1| GTP pyrophosphokinase [Streptococcus pneumoniae 670-6B]
gi|306484918|gb|ADM91787.1| GTP pyrophosphokinase [Streptococcus pneumoniae 670-6B]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|421230253|ref|ZP_15686917.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2061376]
gi|395593779|gb|EJG54021.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2061376]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|325068875|ref|ZP_08127548.1| (p)ppGpp synthetase I, SpoT/RelA [Actinomyces oris K20]
Length = 775
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
IV+A + A H QRRK G PYI HPVAVA IL LG + + +A+LHDTVEDT
Sbjct: 58 IVRAYEVAEKAHSGQRRK--SGEPYITHPVAVATILAELGMTAQ--TLAAAVLHDTVEDT 113
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ----ILHAPHSSHEAKLVKLADK 202
D T E + +FG + +V+ +T + E + + ++ A ++KL D+
Sbjct: 114 DYTLERLRADFGDEISLLVDGVTKLDKLQYGEAAQAETVRKMIIAMSKDIRVLVIKLGDR 173
Query: 203 LHNLR 207
LHN R
Sbjct: 174 LHNAR 178
>gi|168493546|ref|ZP_02717689.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC3059-06]
gi|418074466|ref|ZP_12711719.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11184]
gi|418079068|ref|ZP_12716290.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 4027-06]
gi|418081265|ref|ZP_12718475.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 6735-05]
gi|418089998|ref|ZP_12727152.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43265]
gi|418098963|ref|ZP_12736060.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 6901-05]
gi|418105743|ref|ZP_12742799.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44500]
gi|418115159|ref|ZP_12752145.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 5787-06]
gi|418117317|ref|ZP_12754286.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 6963-05]
gi|418134712|ref|ZP_12771569.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11426]
gi|418174032|ref|ZP_12810644.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41277]
gi|418217085|ref|ZP_12843765.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae Netherlands15B-37]
gi|419432019|ref|ZP_13972152.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP05]
gi|419440826|ref|ZP_13980871.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA40410]
gi|419464927|ref|ZP_14004818.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA04175]
gi|419469444|ref|ZP_14009312.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA06083]
gi|419498009|ref|ZP_14037716.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47522]
gi|419535100|ref|ZP_14074599.1| relA/SpoT family protein [Streptococcus pneumoniae GA17457]
gi|421281631|ref|ZP_15732428.1| guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae GA04672]
gi|421310045|ref|ZP_15760670.1| guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae GA62681]
gi|183576480|gb|EDT97008.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC3059-06]
gi|353746595|gb|EHD27255.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 4027-06]
gi|353748535|gb|EHD29187.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11184]
gi|353752004|gb|EHD32635.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 6735-05]
gi|353761189|gb|EHD41761.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43265]
gi|353768945|gb|EHD49467.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 6901-05]
gi|353775919|gb|EHD56398.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44500]
gi|353785243|gb|EHD65662.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 5787-06]
gi|353787998|gb|EHD68396.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 6963-05]
gi|353837988|gb|EHE18069.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41277]
gi|353870358|gb|EHE50231.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae Netherlands15B-37]
gi|353901949|gb|EHE77479.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11426]
gi|379536527|gb|EHZ01713.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA04175]
gi|379544248|gb|EHZ09393.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA06083]
gi|379563261|gb|EHZ28265.1| relA/SpoT family protein [Streptococcus pneumoniae GA17457]
gi|379577896|gb|EHZ42813.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA40410]
gi|379598842|gb|EHZ63627.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47522]
gi|379629100|gb|EHZ93701.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP05]
gi|395880896|gb|EJG91947.1| guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae GA04672]
gi|395909660|gb|EJH20535.1| guanosine-3,5-bis(Diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae GA62681]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALIYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|357025772|ref|ZP_09087884.1| GTP pyrophosphokinase [Mesorhizobium amorphae CCNWGS0123]
gi|355542281|gb|EHH11445.1| GTP pyrophosphokinase [Mesorhizobium amorphae CCNWGS0123]
Length = 742
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 75/141 (53%), Gaps = 15/141 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT + + I
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGHQKR--ASGDPYFSHPLEVAAILTEMH--MDEATIA 67
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T EI+ FGP + +VE LT K + +K Q +L A
Sbjct: 68 VALLHDTIEDTTATRAEIDELFGPEMGKLVEGLTKLKKLDLVSKKAEQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 128 EDVRVLLVKLADRLHNMRTLD 148
>gi|194397589|ref|YP_002038260.1| GTP pyrophosphokinase [Streptococcus pneumoniae G54]
gi|194357256|gb|ACF55704.1| GTP pyrophosphokinase [Streptococcus pneumoniae G54]
Length = 740
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|421299106|ref|ZP_15749793.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA60080]
gi|395900577|gb|EJH11515.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA60080]
Length = 740
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|415750037|ref|ZP_11477981.1| GTP pyrophosphokinase [Streptococcus pneumoniae SV35]
gi|418133094|ref|ZP_12769965.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11304]
gi|353804977|gb|EHD85255.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11304]
gi|381318331|gb|EIC59056.1| GTP pyrophosphokinase [Streptococcus pneumoniae SV35]
Length = 740
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|254487679|ref|ZP_05100884.1| RelA/SpoT family protein [Roseobacter sp. GAI101]
gi|214044548|gb|EEB85186.1| RelA/SpoT family protein [Roseobacter sp. GAI101]
Length = 716
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 10/131 (7%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTT 149
A D+ H Q R G PY HPV+VA ILT + + II+ALLHDT+EDT +
Sbjct: 30 AYDYGQQMHEGQFRH--SGEPYFTHPVSVAAILTE--QQLDDATIITALLHDTIEDTKAS 85
Query: 150 FEEIEREFGPRVRSVVEELTD--NKHMTRDERKRCQ----ILHAPHSSHEAKLVKLADKL 203
+ E+E+ FG V +V+ +T N + E K+ + + A LVKLAD+L
Sbjct: 86 YAEVEKRFGRDVAELVDGVTKLTNLQLNSTETKQAENFRKLFMAMSKDLRVILVKLADRL 145
Query: 204 HNLRDIERSLP 214
HN+R I+ P
Sbjct: 146 HNMRTIKSMRP 156
>gi|94544772|gb|ABF34820.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Streptococcus pyogenes
MGAS10270]
Length = 743
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 70/133 (52%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA +A+ H +Q RK G PYI HP+ VA IL L + V + LHD VEDT
Sbjct: 32 VAKALSYATAAHFYQVRK--SGEPYIVHPIQVAGILADLH--LDAVTVACGFLHDVVEDT 87
Query: 147 DTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLV 197
D T +EIE +FG R +V+ +T + + + RK +L A LV
Sbjct: 88 DITLDEIEADFGHDARDIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILV 144
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 145 KLADRLHNMRTLK 157
>gi|421207077|ref|ZP_15664129.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2090008]
gi|421292516|ref|ZP_15743250.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA56348]
gi|421312453|ref|ZP_15763055.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA58981]
gi|395574413|gb|EJG34991.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2090008]
gi|395891823|gb|EJH02817.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA56348]
gi|395909307|gb|EJH20183.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA58981]
Length = 740
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|418972852|ref|ZP_13520907.1| RelA/SpoT family protein [Streptococcus pseudopneumoniae ATCC
BAA-960]
gi|383350928|gb|EID28766.1| RelA/SpoT family protein [Streptococcus pseudopneumoniae ATCC
BAA-960]
Length = 740
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVDCHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|307243827|ref|ZP_07525958.1| GTP diphosphokinase [Peptostreptococcus stomatis DSM 17678]
gi|306492830|gb|EFM64852.1| GTP diphosphokinase [Peptostreptococcus stomatis DSM 17678]
Length = 741
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 100/194 (51%), Gaps = 20/194 (10%)
Query: 79 HSPDA-IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++P+A I +V+A + A H Q RK G PYI HPVAVA+IL + + I
Sbjct: 16 YAPNADIDKVVRAYNLAKEAHKDQFRK--SGEPYIIHPVAVANILADME--LDIDTICGG 71
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKRC---QILHAPHSS 191
LLHD VEDTD +IE FG V ++V+ +L K+MT++E + ++ A
Sbjct: 72 LLHDVVEDTDFEEADIEEMFGKDVAALVDGVTKLGKIKYMTKEESQASNLRKMFMAMAKD 131
Query: 192 HEAKLVKLADKLHNLRDIERSLPVNWTEERKTQY-FNWARDVVQGL--RGTNAPIEAELD 248
L+KL+D+LHN+R +E + + K +Y D+ G+ R + I+ EL+
Sbjct: 132 MRVMLIKLSDRLHNMRTLE------YMDSNKVKYKAQETLDIYAGIAHRLGISTIKWELE 185
Query: 249 ALFAKYCTPREGRE 262
L ++ P E E
Sbjct: 186 DLAFRFLYPDEYYE 199
>gi|294012916|ref|YP_003546376.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Sphingobium japonicum UT26S]
gi|292676246|dbj|BAI97764.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Sphingobium japonicum UT26S]
Length = 701
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 73/129 (56%), Gaps = 10/129 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A F+ KH Q+R G PY HP+ VA ILT + I++ALLHDT+EDT
Sbjct: 23 INRAYVFSVQKHGSQKR--ASGDPYFSHPIEVAGILTDFN--LDDQTIVTALLHDTIEDT 78
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHEAKLVKLA 200
T+EEIE+ FG V +V+ +L+ + M+ +ER + L A LVKLA
Sbjct: 79 LVTYEEIEQAFGKDVARMVDGVTKLSKIEAMSENERAAENLRKFLLAMSDDIRVLLVKLA 138
Query: 201 DKLHNLRDI 209
D+LHN+R +
Sbjct: 139 DRLHNMRTL 147
>gi|148984077|ref|ZP_01817372.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP3-BS71]
gi|148997693|ref|ZP_01825257.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP11-BS70]
gi|149001918|ref|ZP_01826872.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP14-BS69]
gi|149021265|ref|ZP_01835511.1| thiol peroxidase [Streptococcus pneumoniae SP23-BS72]
gi|168483486|ref|ZP_02708438.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC1873-00]
gi|168487265|ref|ZP_02711773.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC1087-00]
gi|168491474|ref|ZP_02715617.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC0288-04]
gi|168575168|ref|ZP_02721131.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae MLV-016]
gi|221232384|ref|YP_002511537.1| GTP pyrophosphokinase [Streptococcus pneumoniae ATCC 700669]
gi|225855074|ref|YP_002736586.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae JJA]
gi|225859401|ref|YP_002740911.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae 70585]
gi|237649193|ref|ZP_04523445.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CCRI 1974]
gi|237822270|ref|ZP_04598115.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CCRI 1974M2]
gi|298230751|ref|ZP_06964432.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae str. Canada MDR_19F]
gi|298254448|ref|ZP_06978034.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae str. Canada MDR_19A]
gi|298503389|ref|YP_003725329.1| GTP diphosphokinase [Streptococcus pneumoniae TCH8431/19A]
gi|307068272|ref|YP_003877238.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Streptococcus pneumoniae AP200]
gi|387757872|ref|YP_006064851.1| GTP pyrophosphokinase [Streptococcus pneumoniae OXC141]
gi|410477019|ref|YP_006743778.1| GTP diphosphokinase [Streptococcus pneumoniae gamPNI0373]
gi|415700108|ref|ZP_11457822.1| GTP pyrophosphokinase [Streptococcus pneumoniae 459-5]
gi|417694521|ref|ZP_12343708.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47901]
gi|417696807|ref|ZP_12345985.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47368]
gi|417699029|ref|ZP_12348200.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41317]
gi|418083450|ref|ZP_12720647.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44288]
gi|418085638|ref|ZP_12722817.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47281]
gi|418092250|ref|ZP_12729390.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44452]
gi|418101106|ref|ZP_12738189.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 7286-06]
gi|418103334|ref|ZP_12740406.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP070]
gi|418108073|ref|ZP_12745110.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41410]
gi|418110612|ref|ZP_12747631.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49447]
gi|418119093|ref|ZP_12756050.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA18523]
gi|418121701|ref|ZP_12758644.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44194]
gi|418123968|ref|ZP_12760899.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44378]
gi|418128512|ref|ZP_12765405.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP170]
gi|418137706|ref|ZP_12774544.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11663]
gi|418144591|ref|ZP_12781386.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13494]
gi|418151151|ref|ZP_12787897.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA14798]
gi|418162690|ref|ZP_12799371.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17328]
gi|418169744|ref|ZP_12806385.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19077]
gi|418171783|ref|ZP_12808407.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19451]
gi|418176434|ref|ZP_12813025.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41437]
gi|418178690|ref|ZP_12815273.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41565]
gi|418183172|ref|ZP_12819730.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43380]
gi|418185395|ref|ZP_12821936.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47283]
gi|418194211|ref|ZP_12830700.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47439]
gi|418196305|ref|ZP_12832781.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47688]
gi|418219374|ref|ZP_12846039.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP127]
gi|418221675|ref|ZP_12848328.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47751]
gi|418223847|ref|ZP_12850487.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 5185-06]
gi|418232644|ref|ZP_12859230.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA07228]
gi|418237099|ref|ZP_12863665.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19690]
gi|418239172|ref|ZP_12865723.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NorthCarolina6A-23]
gi|419423425|ref|ZP_13963638.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43264]
gi|419425588|ref|ZP_13965784.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 7533-05]
gi|419427703|ref|ZP_13967884.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 5652-06]
gi|419429845|ref|ZP_13970009.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11856]
gi|419436441|ref|ZP_13976528.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 8190-05]
gi|419445153|ref|ZP_13985168.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19923]
gi|419447304|ref|ZP_13987309.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 7879-04]
gi|419449433|ref|ZP_13989429.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 4075-00]
gi|419450971|ref|ZP_13990957.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP02]
gi|419453803|ref|ZP_13993773.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP03]
gi|419458232|ref|ZP_13998174.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02254]
gi|419460455|ref|ZP_14000383.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02270]
gi|419462808|ref|ZP_14002711.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02714]
gi|419471531|ref|ZP_14011390.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA07914]
gi|419473699|ref|ZP_14013548.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13430]
gi|419475975|ref|ZP_14015811.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA14688]
gi|419482683|ref|ZP_14022470.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA40563]
gi|419487120|ref|ZP_14026882.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44128]
gi|419489123|ref|ZP_14028872.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44386]
gi|419491545|ref|ZP_14031283.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47179]
gi|419495828|ref|ZP_14035545.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47461]
gi|419504382|ref|ZP_14044050.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47760]
gi|419506529|ref|ZP_14046190.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49194]
gi|419510910|ref|ZP_14050551.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP141]
gi|419526363|ref|ZP_14065921.1| relA/SpoT family protein [Streptococcus pneumoniae GA14373]
gi|419532845|ref|ZP_14072360.1| relA/SpoT family protein [Streptococcus pneumoniae GA47794]
gi|421209412|ref|ZP_15666425.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070005]
gi|421211518|ref|ZP_15668500.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070035]
gi|421213581|ref|ZP_15670535.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070108]
gi|421215743|ref|ZP_15672664.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070109]
gi|421225474|ref|ZP_15682212.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070768]
gi|421232350|ref|ZP_15688991.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2080076]
gi|421238974|ref|ZP_15695538.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2071247]
gi|421241108|ref|ZP_15697653.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2080913]
gi|421245484|ref|ZP_15701982.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2081685]
gi|421249874|ref|ZP_15706331.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2082239]
gi|421275360|ref|ZP_15726189.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA52612]
gi|421287915|ref|ZP_15738678.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA58771]
gi|421290206|ref|ZP_15740956.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA54354]
gi|421302886|ref|ZP_15753550.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17484]
gi|421305598|ref|ZP_15756252.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA62331]
gi|421307838|ref|ZP_15758480.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA60132]
gi|421314520|ref|ZP_15765107.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47562]
gi|444387046|ref|ZP_21185072.1| GTP diphosphokinase [Streptococcus pneumoniae PCS125219]
gi|444389255|ref|ZP_21187172.1| GTP diphosphokinase [Streptococcus pneumoniae PCS70012]
gi|444393017|ref|ZP_21190678.1| GTP diphosphokinase [Streptococcus pneumoniae PCS81218]
gi|444398095|ref|ZP_21195578.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0006]
gi|444399732|ref|ZP_21197168.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0007]
gi|444403009|ref|ZP_21200132.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0008]
gi|444405187|ref|ZP_21202105.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0009]
gi|444407712|ref|ZP_21204379.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0010]
gi|444416600|ref|ZP_21212688.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0360]
gi|444419906|ref|ZP_21215740.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0427]
gi|147756192|gb|EDK63234.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP11-BS70]
gi|147759727|gb|EDK66717.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP14-BS69]
gi|147923366|gb|EDK74479.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP3-BS71]
gi|147930366|gb|EDK81350.1| thiol peroxidase [Streptococcus pneumoniae SP23-BS72]
gi|172043164|gb|EDT51210.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC1873-00]
gi|183569827|gb|EDT90355.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC1087-00]
gi|183574171|gb|EDT94699.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae CDC0288-04]
gi|183578856|gb|EDT99384.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae MLV-016]
gi|220674845|emb|CAR69420.1| GTP pyrophosphokinase [Streptococcus pneumoniae ATCC 700669]
gi|225720921|gb|ACO16775.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae 70585]
gi|225722569|gb|ACO18422.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Streptococcus pneumoniae JJA]
gi|298238984|gb|ADI70115.1| GTP diphosphokinase [Streptococcus pneumoniae TCH8431/19A]
gi|301800461|emb|CBW33097.1| GTP pyrophosphokinase [Streptococcus pneumoniae OXC141]
gi|306409809|gb|ADM85236.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Streptococcus pneumoniae AP200]
gi|332199675|gb|EGJ13750.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41317]
gi|332200205|gb|EGJ14278.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47368]
gi|332201070|gb|EGJ15141.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47901]
gi|353754670|gb|EHD35282.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44288]
gi|353756347|gb|EHD36948.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47281]
gi|353762950|gb|EHD43507.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44452]
gi|353770606|gb|EHD51118.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 7286-06]
gi|353774635|gb|EHD55122.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP070]
gi|353778350|gb|EHD58818.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41410]
gi|353781233|gb|EHD61678.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49447]
gi|353791045|gb|EHD71426.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA18523]
gi|353792537|gb|EHD72909.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44194]
gi|353795788|gb|EHD76134.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44378]
gi|353799011|gb|EHD79334.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP170]
gi|353807057|gb|EHD87329.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13494]
gi|353814361|gb|EHD94587.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA14798]
gi|353826752|gb|EHE06909.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17328]
gi|353833723|gb|EHE13831.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19077]
gi|353835520|gb|EHE15614.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19451]
gi|353840505|gb|EHE20569.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41437]
gi|353842749|gb|EHE22795.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41565]
gi|353848155|gb|EHE28172.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43380]
gi|353848679|gb|EHE28691.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47283]
gi|353857789|gb|EHE37751.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47439]
gi|353860316|gb|EHE40261.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47688]
gi|353873734|gb|EHE53593.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP127]
gi|353874985|gb|EHE54839.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47751]
gi|353878645|gb|EHE58475.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 5185-06]
gi|353885957|gb|EHE65741.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA07228]
gi|353891537|gb|EHE71291.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19690]
gi|353892163|gb|EHE71912.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NorthCarolina6A-23]
gi|353900661|gb|EHE76212.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11663]
gi|379529896|gb|EHY95137.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02254]
gi|379530240|gb|EHY95480.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02714]
gi|379530591|gb|EHY95830.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02270]
gi|379546247|gb|EHZ11386.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA07914]
gi|379550023|gb|EHZ15125.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA11856]
gi|379550863|gb|EHZ15959.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA13430]
gi|379557003|gb|EHZ22050.1| relA/SpoT family protein [Streptococcus pneumoniae GA14373]
gi|379558757|gb|EHZ23789.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA14688]
gi|379572846|gb|EHZ37803.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA19923]
gi|379579275|gb|EHZ44182.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA40563]
gi|379585489|gb|EHZ50345.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44128]
gi|379585997|gb|EHZ50851.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA43264]
gi|379586665|gb|EHZ51515.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA44386]
gi|379592907|gb|EHZ57722.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47179]
gi|379593914|gb|EHZ58725.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47461]
gi|379605365|gb|EHZ70116.1| relA/SpoT family protein [Streptococcus pneumoniae GA47794]
gi|379605770|gb|EHZ70520.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47760]
gi|379608443|gb|EHZ73189.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA49194]
gi|379612880|gb|EHZ77595.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 8190-05]
gi|379614844|gb|EHZ79554.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 7879-04]
gi|379617896|gb|EHZ82576.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 5652-06]
gi|379619049|gb|EHZ83723.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 7533-05]
gi|379622051|gb|EHZ86687.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae 4075-00]
gi|379622676|gb|EHZ87310.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP02]
gi|379625873|gb|EHZ90499.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae EU-NP03]
gi|379631513|gb|EHZ96090.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP141]
gi|381314804|gb|EIC55570.1| GTP pyrophosphokinase [Streptococcus pneumoniae 459-5]
gi|395572626|gb|EJG33221.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070035]
gi|395573508|gb|EJG34098.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070005]
gi|395578812|gb|EJG39322.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070108]
gi|395579950|gb|EJG40445.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070109]
gi|395588961|gb|EJG49283.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2070768]
gi|395594853|gb|EJG55088.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2080076]
gi|395600617|gb|EJG60772.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2071247]
gi|395607486|gb|EJG67583.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2080913]
gi|395608011|gb|EJG68107.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2081685]
gi|395613568|gb|EJG73596.1| GTP pyrophosphokinase [Streptococcus pneumoniae 2082239]
gi|395873324|gb|EJG84416.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA52612]
gi|395886478|gb|EJG97494.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA58771]
gi|395887891|gb|EJG98905.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA54354]
gi|395901508|gb|EJH12444.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17484]
gi|395904556|gb|EJH15470.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA62331]
gi|395907223|gb|EJH18117.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA60132]
gi|395913205|gb|EJH24058.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47562]
gi|406369964|gb|AFS43654.1| GTP diphosphokinase [Streptococcus pneumoniae gamPNI0373]
gi|429319837|emb|CCP33151.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPN034183]
gi|429321653|emb|CCP35125.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPN994039]
gi|429323474|emb|CCP31166.1| GTP pyrophosphokinase [Streptococcus pneumoniae SPN994038]
gi|444254256|gb|ELU60702.1| GTP diphosphokinase [Streptococcus pneumoniae PCS125219]
gi|444257855|gb|ELU64188.1| GTP diphosphokinase [Streptococcus pneumoniae PCS70012]
gi|444260752|gb|ELU67060.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0006]
gi|444262604|gb|ELU68895.1| GTP diphosphokinase [Streptococcus pneumoniae PCS81218]
gi|444265436|gb|ELU71445.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0008]
gi|444268296|gb|ELU74165.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0007]
gi|444271308|gb|ELU77059.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0010]
gi|444274968|gb|ELU80601.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0009]
gi|444285465|gb|ELU90524.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0360]
gi|444286011|gb|ELU91019.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0427]
Length = 740
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|149006712|ref|ZP_01830398.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP18-BS74]
gi|417677371|ref|ZP_12326778.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17545]
gi|418112984|ref|ZP_12749984.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41538]
gi|418155629|ref|ZP_12792356.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16242]
gi|418226026|ref|ZP_12852654.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP112]
gi|419467257|ref|ZP_14007138.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA05248]
gi|419513035|ref|ZP_14052667.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA05578]
gi|419517242|ref|ZP_14056858.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02506]
gi|421283781|ref|ZP_15734567.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA04216]
gi|147761627|gb|EDK68591.1| GTP pyrophosphokinase [Streptococcus pneumoniae SP18-BS74]
gi|332072812|gb|EGI83293.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA17545]
gi|353783346|gb|EHD63775.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA41538]
gi|353819878|gb|EHE00067.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16242]
gi|353881223|gb|EHE61037.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae NP112]
gi|379543004|gb|EHZ08156.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA05248]
gi|379634200|gb|EHZ98765.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA05578]
gi|379639315|gb|EIA03859.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA02506]
gi|395880467|gb|EJG91519.1| bifunctional (P)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA04216]
Length = 740
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|440700110|ref|ZP_20882389.1| putative GTP diphosphokinase [Streptomyces turgidiscabies Car8]
gi|440277347|gb|ELP65471.1| putative GTP diphosphokinase [Streptomyces turgidiscabies Car8]
Length = 725
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 79 HSPDAIMN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PDA + + +A A H Q RK G PYI HP+AV IL LG + + ++
Sbjct: 60 HHPDADLEPLRRAYVLAESSHRGQMRK--SGEPYITHPLAVTLILAELG--AETTTLTAS 115
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSH 192
LLHDTVEDTD T +++ EFG VR +V+ +T D E R ++L A +
Sbjct: 116 LLHDTVEDTDVTLDQVGEEFGAEVRYIVDGVTKLEKVDYGTAAEPETFR-KMLVATGNDV 174
Query: 193 EAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
+KLAD+LHN+R + P E++ + RDV+
Sbjct: 175 RVMSIKLADRLHNMRTLGVMRP-----EKQERIAKVTRDVL 210
>gi|444394540|ref|ZP_21192091.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0002]
gi|444259782|gb|ELU66091.1| GTP diphosphokinase [Streptococcus pneumoniae PNI0002]
Length = 740
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|418977993|ref|ZP_13525798.1| RelA/SpoT family protein [Streptococcus mitis SK575]
gi|383348757|gb|EID26714.1| RelA/SpoT family protein [Streptococcus mitis SK575]
Length = 740
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHEAKLVKLADK 202
T +++EREFGP VR +V+ +L K+ + +E+ ++L A LVKL+D+
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVKYKSHEEQLAENHRKMLMAMSEDIRVILVKLSDR 145
Query: 203 LHNLRDIE 210
LHN+R ++
Sbjct: 146 LHNMRTLK 153
>gi|342164246|ref|YP_004768885.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Streptococcus pseudopneumoniae IS7493]
gi|341934128|gb|AEL11025.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Streptococcus pseudopneumoniae IS7493]
Length = 740
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVDCHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|328543518|ref|YP_004303627.1| GTP pyrophosphokinase [Polymorphum gilvum SL003B-26A1]
gi|326413262|gb|ADZ70325.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (PpGpp
synthetase I) ((P)ppGpp synthetase) [Polymorphum gilvum
SL003B-26A1]
Length = 735
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 74/138 (53%), Gaps = 12/138 (8%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
++ +A++N KA +A KH Q R G PY HP+ VA ILT L + I AL
Sbjct: 17 NADEALLN--KAYVYAMQKHGSQMR--ASGDPYFSHPLEVAAILTDL--RLDEATIAVAL 70
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSH 192
LHDT+EDTD T EI+ FG + +VE LT K + +K Q +L A
Sbjct: 71 LHDTIEDTDATRSEIDTVFGEEIGKLVEGLTKIKRLDLVSQKAKQAENFRKLLLAIADDV 130
Query: 193 EAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 131 RVLLVKLADRLHNMRTLQ 148
>gi|113953676|ref|YP_731890.1| RelA/SpoT family protein [Synechococcus sp. CC9311]
gi|113881027|gb|ABI45985.1| RelA/SpoT family protein [Synechococcus sp. CC9311]
Length = 778
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 61/108 (56%), Gaps = 8/108 (7%)
Query: 108 GTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEE 167
G PYI HPVAVA +L +G ++ VI + LHD VEDTD T ++IE FGP VR +VE
Sbjct: 88 GDPYIVHPVAVADLLRDIGASAS--VIAAGFLHDVVEDTDVTPDQIESHFGPEVRELVEG 145
Query: 168 LTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADKLHNLRDI 209
+T + R Q + A S LVKLAD+LHN+R I
Sbjct: 146 VTKLGGLHFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTI 193
>gi|89053005|ref|YP_508456.1| (p)ppGpp synthetase I SpoT/RelA [Jannaschia sp. CCS1]
gi|88862554|gb|ABD53431.1| (p)ppGpp synthetase I (GTP pyrophosphokinase) SpoT/RelA [Jannaschia
sp. CCS1]
Length = 722
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 79/143 (55%), Gaps = 11/143 (7%)
Query: 79 HSPDAIMNIVK-ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++P A ++++ A + + H Q R G PY HPVAVA ILT + + I++A
Sbjct: 29 YNPKARESLIRDAFAYGARMHDGQTRH--SGEPYFTHPVAVAAILTE--QQLDDATIVTA 84
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD--NKHMTRDERKRCQ----ILHAPHSS 191
LLHDT+EDT +T+ E+ + FGP + +++ +T N ++ E K+ + + A
Sbjct: 85 LLHDTIEDTRSTYGEVAKHFGPEIAELIDGVTKLTNLQLSNRESKQAENFRKLFMAMSKD 144
Query: 192 HEAKLVKLADKLHNLRDIERSLP 214
LVKLAD+LHN+R I P
Sbjct: 145 LRVILVKLADRLHNMRTIRHMRP 167
>gi|419766493|ref|ZP_14292690.1| RelA/SpoT family protein [Streptococcus mitis SK579]
gi|383354062|gb|EID31645.1| RelA/SpoT family protein [Streptococcus mitis SK579]
Length = 740
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVDCHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|373858284|ref|ZP_09601022.1| metal-dependent phosphohydrolase HD sub domain protein [Bacillus
sp. 1NLA3E]
gi|372452097|gb|EHP25570.1| metal-dependent phosphohydrolase HD sub domain protein [Bacillus
sp. 1NLA3E]
Length = 178
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 94/179 (52%), Gaps = 19/179 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA + AS H Q RK + PYI HPVAV IL G +I + +LHDTVEDT
Sbjct: 4 IEKALEVASKAHEQQYRKQTD-IPYITHPVAVGMILMKAG--YGEELIAAGILHDTVEDT 60
Query: 147 DTTFEEIEREFGPRVRSVVEELTD-NKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
+ ++I+R FG + +VE ++ +K ++ + RK+ I + E ++V ADKLHN
Sbjct: 61 LISLDDIDRIFGKEIAGIVEGCSEPDKSLSWEARKKHTIEFLKLAPEEIRIVACADKLHN 120
Query: 206 LR----DIERSLPVNWTEER----KTQYFNWARDVVQGLRGTNA-----PIEAELDALF 251
++ D E+S W ER K Q + R++V+ L ++ + E+D LF
Sbjct: 121 IKSIINDYEKSGNDVW--ERFNRGKDQQEWYYRNIVESLGYVSSFELLEELRREVDRLF 177
>gi|160934229|ref|ZP_02081616.1| hypothetical protein CLOLEP_03100 [Clostridium leptum DSM 753]
gi|156866902|gb|EDO60274.1| RelA/SpoT family protein [Clostridium leptum DSM 753]
Length = 730
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/130 (39%), Positives = 72/130 (55%), Gaps = 10/130 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA FA H Q+R+ G PYI HPV+VA+IL LG + +V ++LLHD VEDT
Sbjct: 34 IDKAYQFALESHGDQKRRS--GVPYILHPVSVAYILVELGMDTESIV--ASLLHDVVEDT 89
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
EEI++ FG V ++ + +T + R+ Q +L A ++KLA
Sbjct: 90 PVGLEEIKKLFGIEVANLTDGVTKLGRIPYSSREEQQAENLRKMLIAMADDIRVIIIKLA 149
Query: 201 DKLHNLRDIE 210
D+LHN+R IE
Sbjct: 150 DRLHNMRTIE 159
>gi|297559818|ref|YP_003678792.1| (p)ppGpp synthetase I SpoT/RelA [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296844266|gb|ADH66286.1| (p)ppGpp synthetase I, SpoT/RelA [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 817
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 9/140 (6%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A + A+H H Q+RK G PYI HP+AVA IL LG + +ALLHDTVEDTD
Sbjct: 118 RAYEVAAHHHRDQKRK--SGDPYITHPLAVATILAELGM--QEATLAAALLHDTVEDTDY 173
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLH 204
+ E+ +FG + +V+ +T + E + + + A ++KL D+LH
Sbjct: 174 SLGELRSDFGDEIAELVDGVTKLDKVKYGEATQAETVRKMVVAMARDIRVLVIKLCDRLH 233
Query: 205 NLRDIERSLPVNWTEERKTQ 224
N+R + R LP E+K +
Sbjct: 234 NMRTL-RYLPSRAKREKKAR 252
>gi|418200777|ref|ZP_12837220.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47976]
gi|353864318|gb|EHE44236.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47976]
Length = 496
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRMIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|222148078|ref|YP_002549035.1| GTP pyrophosphohydrolases/synthetases RelA/SpoT family
[Agrobacterium vitis S4]
gi|221735066|gb|ACM36029.1| GTP pyrophosphohydrolases/synthetases RelA/SpoT family
[Agrobacterium vitis S4]
Length = 746
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 77/145 (53%), Gaps = 15/145 (10%)
Query: 79 HSPDA---IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PDA ++N KA +A KH Q+R G PYI HP+ VA ILT + + + +
Sbjct: 14 YKPDANEALLN--KAYVYAMQKHGQQKR--ASGDPYISHPLEVAAILTEMHLDESTIAV- 68
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T EI+ FG + +VE LT K + +K Q +L A
Sbjct: 69 -ALLHDTIEDTTATRAEIDELFGEDIGRLVEGLTKLKKLDLVTKKAKQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIERSLP 214
LVKLAD+LHN+R +E P
Sbjct: 128 DDVRVLLVKLADRLHNMRTLEHMRP 152
>gi|226185535|dbj|BAH33639.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus erythropolis PR4]
Length = 809
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 74/131 (56%), Gaps = 11/131 (8%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A D A +H QRRK G PYI HP+AVA IL LG + +++ALLHDTVEDT
Sbjct: 108 RAYDVAEDRHSSQRRK--SGDPYITHPLAVASILAELGM--DTTTLVAALLHDTVEDTGY 163
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHM-----TRDERKRCQILHAPHSSHEAKLVKLADKL 203
+ EE+ ++FG V +V+ +T + E R I+ A ++K+AD+L
Sbjct: 164 SLEELTKDFGDEVAHLVDGVTKLDKVVLGTAAEGETIRKMII-AMARDPRVLVIKVADRL 222
Query: 204 HNLRDIERSLP 214
HN+R + R LP
Sbjct: 223 HNMRTM-RFLP 232
>gi|406658950|ref|ZP_11067090.1| GTP diphosphokinase [Streptococcus iniae 9117]
gi|405579165|gb|EKB53279.1| GTP diphosphokinase [Streptococcus iniae 9117]
Length = 739
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 16/144 (11%)
Query: 76 SGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
SG S + A ++A+ H++Q RK G PYI HP+ VA IL L + V +
Sbjct: 17 SGYMSESDAAFVKFALNYATAAHYYQARKS--GEPYIIHPIQVAGILADLH--LDAVTVA 72
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILH 186
LHD VEDTD T +IE +FG VR +++ +T + + + RK +L
Sbjct: 73 CGFLHDVVEDTDITLADIETDFGKDVRDIIDGVTKLGKVEYKSHEEQLAENHRK---MLM 129
Query: 187 APHSSHEAKLVKLADKLHNLRDIE 210
A LVKLAD+LHN+R ++
Sbjct: 130 AMSKDIRVILVKLADRLHNMRTLK 153
>gi|383771398|ref|YP_005450463.1| GTP pyrophosphokinase [Bradyrhizobium sp. S23321]
gi|381359521|dbj|BAL76351.1| GTP pyrophosphokinase [Bradyrhizobium sp. S23321]
Length = 750
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q R G PY HP+ VA ILT L K+ + I++ALLHDT+EDT+
Sbjct: 49 RAYVYAMKAHGSQTRAS--GDPYFSHPLEVAAILTDL-KLDD-ATIVAALLHDTIEDTEA 104
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EI++ FGP + ++VE LT K + R+ Q +L A LVKLAD+
Sbjct: 105 TRAEIDQIFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADDVRVLLVKLADR 164
Query: 203 LHNLRDIE 210
LHN+R ++
Sbjct: 165 LHNMRTLD 172
>gi|440757008|ref|ZP_20936206.1| metal dependent phosphohydrolase [Pantoea agglomerans 299R]
gi|436429265|gb|ELP26904.1| metal dependent phosphohydrolase [Pantoea agglomerans 299R]
Length = 198
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 72/131 (54%), Gaps = 8/131 (6%)
Query: 89 KATDFASHKHHF--QRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+A FA+ H QRRK + PYI HP AV ++ + + ++ +A LHDTVEDT
Sbjct: 8 QARRFATEAHASAGQRRKYTD-EPYIVHPAAVVELVRSVSH--DEALLAAAWLHDTVEDT 64
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMT---RDERKRCQILHAPHSSHEAKLVKLADKL 203
TT +IE FG RV S+VE LTD+ T R RK H +S EA+ +KLAD +
Sbjct: 65 STTQSDIEAHFGARVASLVEMLTDSAPATAKNRAARKLAHFRHTASASPEAQTIKLADII 124
Query: 204 HNLRDIERSLP 214
N R I R P
Sbjct: 125 DNTRAIVRFDP 135
>gi|359772044|ref|ZP_09275482.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia effusa NBRC 100432]
gi|359310808|dbj|GAB18260.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia effusa NBRC 100432]
Length = 789
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A D A +H Q RK G PYI HP+AVA IL LG + +++ALLHDTVEDT
Sbjct: 82 QAYDVADERHQGQFRK--SGDPYITHPLAVATILADLGM--DTTTLVAALLHDTVEDTGY 137
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLH 204
+E+E +FGP V +V+ +T + + + A ++K+AD+LH
Sbjct: 138 GLDELESDFGPEVAHLVDGVTKLDKVALGSAAEAETIRKMVIAMARDPRVLVIKVADRLH 197
Query: 205 NLRDIERSLP 214
N+R + R LP
Sbjct: 198 NMRTM-RFLP 206
>gi|320547771|ref|ZP_08042055.1| GTP diphosphokinase [Streptococcus equinus ATCC 9812]
gi|320447531|gb|EFW88290.1| GTP diphosphokinase [Streptococcus equinus ATCC 9812]
Length = 740
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 71/133 (53%), Gaps = 16/133 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+ KA D+A+ H Q R+ G PYI HP+ VA IL L + V + LHD VEDT
Sbjct: 28 VQKALDYATKAHISQVRQ--SGEPYIIHPIQVAGILADLH--LDVVTVACGFLHDVVEDT 83
Query: 147 DTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLV 197
D T +EIE EFG VR +V+ +T + + + RK +L A LV
Sbjct: 84 DITLDEIEAEFGKDVRIIVDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILV 140
Query: 198 KLADKLHNLRDIE 210
KLAD+LHN+R ++
Sbjct: 141 KLADRLHNMRTLK 153
>gi|227547677|ref|ZP_03977726.1| GTP diphosphokinase [Bifidobacterium longum subsp. longum ATCC
55813]
gi|227211932|gb|EEI79828.1| GTP diphosphokinase [Bifidobacterium longum subsp. infantis ATCC
55813]
Length = 784
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 93/191 (48%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 46 HHPGEDLSILDRAYRRAVIQHSAQRRK--SGEPYIIHPLAVSQILADLGM--GPIVVAAG 101
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 102 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 161
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 162 TLVVKLADRVHNAR--------TWRYVKTTSAQKKARETLDVYAPLANRLGMNA-IKTEL 212
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 213 EELSFKVLYPK 223
>gi|389865003|ref|YP_006367244.1| GTP pyrophosphokinase [Modestobacter marinus]
gi|388487207|emb|CCH88765.1| GTP pyrophosphokinase [Modestobacter marinus]
Length = 800
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A D A H Q+RK G PYI HP+AVA +L LG + +++ALLHDTVEDT
Sbjct: 94 RAYDVAEEAHAEQKRK--SGDPYITHPLAVATVLAGLGM--DTTTLVAALLHDTVEDTGV 149
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLH 204
E I +FGP V +V+ +T + + + + + A ++KLAD+LH
Sbjct: 150 DLESIRADFGPEVAHLVDGVTKIDKVKFGDAAQAETIRKMIVAMSRDPRVLVIKLADRLH 209
Query: 205 NLRDIERSLP 214
N+R + R LP
Sbjct: 210 NMRTL-RFLP 218
>gi|419717963|ref|ZP_14245305.1| HD domain protein [Lachnoanaerobaculum saburreum F0468]
gi|383305826|gb|EIC97169.1| HD domain protein [Lachnoanaerobaculum saburreum F0468]
Length = 182
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA FA+ H Q RK + PYI HP+ V I++ + + V +ALLHDTVEDT
Sbjct: 2 IGKAVKFATKAHEGQFRKGSK-IPYIIHPLEVCSIVSLM--TGDIEVRCAALLHDTVEDT 58
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T E+IE+ FG RV ++V +++K ERK I H + E K++ L DKL N+
Sbjct: 59 AVTVEDIEKNFGKRVAALVGRESEDKSKPWLERKIHTIKHLKNECIEVKMIALGDKLSNI 118
Query: 207 R 207
R
Sbjct: 119 R 119
>gi|403527500|ref|YP_006662387.1| GTP pyrophosphokinase RelA [Arthrobacter sp. Rue61a]
gi|403229927|gb|AFR29349.1| GTP pyrophosphokinase RelA [Arthrobacter sp. Rue61a]
Length = 797
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A A H Q+RK G PYI HPVAVA IL LG + +ALLHDTVEDT
Sbjct: 91 IQRAFAVAEQSHQGQKRK--SGDPYITHPVAVATILAELGMTGT--TLAAALLHDTVEDT 146
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADK 202
T ++ R+FGP V +V+ +T ++ E + + + A ++KLAD+
Sbjct: 147 PYTLADLTRDFGPEVAMLVDGVTKLDKVSFGEAAQSETVRKMVVAMAKDIRVLMIKLADR 206
Query: 203 LHNLR 207
LHN R
Sbjct: 207 LHNAR 211
>gi|384218336|ref|YP_005609502.1| GTP pyrophosphokinase [Bradyrhizobium japonicum USDA 6]
gi|354957235|dbj|BAL09914.1| GTP pyrophosphokinase [Bradyrhizobium japonicum USDA 6]
Length = 751
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q R G PY HP+ VA ILT L K+ + I++ALLHDT+EDT+
Sbjct: 50 RAYVYAMKAHGSQTRAS--GDPYFSHPLEVAAILTDL-KLDD-ATIVAALLHDTIEDTEA 105
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EI++ FGP + ++VE LT K + R+ Q +L A LVKLAD+
Sbjct: 106 TRAEIDQIFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADDVRVLLVKLADR 165
Query: 203 LHNLRDIE 210
LHN+R ++
Sbjct: 166 LHNMRTLD 173
>gi|347753839|ref|YP_004861403.1| (p)ppGpp synthetase RelA/SpoT family [Candidatus
Chloracidobacterium thermophilum B]
gi|347586357|gb|AEP10887.1| (p)ppGpp synthetase, RelA/SpoT family [Candidatus
Chloracidobacterium thermophilum B]
Length = 731
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 85/139 (61%), Gaps = 11/139 (7%)
Query: 79 HSPDAIMNIVK-ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ P+A +++++ A ++ H Q RK G PY+ HP+AVA+IL + + + + +
Sbjct: 14 YHPNADLDLLRRAYLLSAQMHKGQVRKS--GEPYLMHPLAVAYILAEMR--LDVICVTTG 69
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT---DNKHMTRDERKR---CQILHAPHSS 191
LLHD VEDT T EE+E++FGP + +V+ LT + ++ +R++R+ ++L A
Sbjct: 70 LLHDVVEDTHVTLEELEQQFGPEIAHLVDGLTKISNIEYTSREDRQAETVRKMLLAMVDD 129
Query: 192 HEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 130 IRVVLVKLADRLHNMRTLD 148
>gi|407974591|ref|ZP_11155500.1| (p)ppGpp synthetase I SpoT/RelA [Nitratireductor indicus C115]
gi|407430280|gb|EKF42955.1| (p)ppGpp synthetase I SpoT/RelA [Nitratireductor indicus C115]
Length = 753
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 76/142 (53%), Gaps = 19/142 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH QRR G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGHQRR--ASGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T EI+ FGP + +VE LT K + +K Q +L A
Sbjct: 66 IAVALLHDTIEDTTATRAEIDELFGPDIGKLVEGLTKLKRLDLVSKKAHQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 126 ISDDVRVLLVKLADRLHNMRTL 147
>gi|386402437|ref|ZP_10087215.1| (p)ppGpp synthetase, RelA/SpoT family [Bradyrhizobium sp. WSM1253]
gi|385743063|gb|EIG63259.1| (p)ppGpp synthetase, RelA/SpoT family [Bradyrhizobium sp. WSM1253]
Length = 761
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q R G PY HP+ VA ILT L K+ + I++ALLHDT+EDT+
Sbjct: 60 RAYVYAMKAHGSQTRAS--GDPYFSHPLEVAAILTDL-KLDD-ATIVAALLHDTIEDTEA 115
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EI++ FGP + ++VE LT K + R+ Q +L A LVKLAD+
Sbjct: 116 TRAEIDQIFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADDVRVLLVKLADR 175
Query: 203 LHNLRDIE 210
LHN+R ++
Sbjct: 176 LHNMRTLD 183
>gi|291297171|ref|YP_003508569.1| (p)ppGpp synthetase I SpoT/RelA [Meiothermus ruber DSM 1279]
gi|290472130|gb|ADD29549.1| (p)ppGpp synthetase I, SpoT/RelA [Meiothermus ruber DSM 1279]
Length = 750
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 74/152 (48%), Gaps = 38/152 (25%)
Query: 83 AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDT 142
A + +A +FA H Q+RK G PYI HPVAVA IL LG + +++ LLHDT
Sbjct: 38 AKAQVREALEFAYRAHEGQQRKS--GEPYIVHPVAVAQILAELG--LDVETLLAGLLHDT 93
Query: 143 VEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAK------- 195
+EDT+ E+IE FG VR +VE E K ++ H++ E K
Sbjct: 94 IEDTEVRPEDIEERFGAAVRKIVE----------GETKVSKLYKLAHAAQEDKHAEGKHA 143
Query: 196 -----------------LVKLADKLHNLRDIE 210
+VKLAD+LHNLR +E
Sbjct: 144 EDLRQMFIAMAEDVRIIIVKLADRLHNLRTLE 175
>gi|227821398|ref|YP_002825368.1| GTP pyrophosphohydrolase/synthetase, RelA/SpoT family
[Sinorhizobium fredii NGR234]
gi|227340397|gb|ACP24615.1| GTP pyrophosphohydrolase/synthetase, RelA/SpoT family
[Sinorhizobium fredii NGR234]
Length = 741
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 15/141 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PD A++N KA +A KH Q+R G PYI HP+ VA ILT + + + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGQQKR--ASGDPYISHPLEVAAILTEMHLDESTIAV- 68
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T +EI+ FG + ++VE LT K + +K Q +L A
Sbjct: 69 -ALLHDTIEDTTATRQEIDELFGEDIGALVEGLTKIKKLDLVTKKAKQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 128 DDVRVLLVKLADRLHNMRTLD 148
>gi|304398102|ref|ZP_07379977.1| metal dependent phosphohydrolase [Pantoea sp. aB]
gi|304354388|gb|EFM18760.1| metal dependent phosphohydrolase [Pantoea sp. aB]
Length = 198
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 72/131 (54%), Gaps = 8/131 (6%)
Query: 89 KATDFASHKHHF--QRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+A FA+ H QRRK + PYI HP AV ++ + + ++ +A LHDTVEDT
Sbjct: 8 QARRFATEAHASAGQRRKYTD-EPYIVHPAAVVELVRSVSH--DEALLAAAWLHDTVEDT 64
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMT---RDERKRCQILHAPHSSHEAKLVKLADKL 203
TT +IE FG RV S+VE LTD+ T R RK H +S EA+ +KLAD +
Sbjct: 65 STTQSDIEAHFGARVASLVEMLTDSAPATAKNRAARKLAHFRHTASASPEAQTIKLADII 124
Query: 204 HNLRDIERSLP 214
N R I R P
Sbjct: 125 DNTRAIVRFDP 135
>gi|291457741|ref|ZP_06597131.1| GTP diphosphokinase [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|291380794|gb|EFE88312.1| GTP diphosphokinase [Bifidobacterium breve DSM 20213 = JCM 1192]
Length = 780
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 93/191 (48%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 42 HHPGEDLSILDRAYRRAVIQHSAQRRK--SGEPYIIHPLAVSQILADLGM--GPIVVAAG 97
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 98 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 157
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 158 TLVVKLADRVHNAR--------TWRYVKTTSAQKKARETLDVYAPLANRLGMNA-IKTEL 208
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 209 EELSFKVLYPK 219
>gi|392412123|ref|YP_006448730.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfomonile tiedjei DSM
6799]
gi|390625259|gb|AFM26466.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfomonile tiedjei DSM
6799]
Length = 737
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 85/154 (55%), Gaps = 17/154 (11%)
Query: 64 RLGEAPDTGDSDSGMHSPDAIMNIVKATDFASHKHHF-QRRKDPEGTPYIEHPVAVAHIL 122
R GE D S + PDA +++++A S + H Q R+ G PY+ HPVAV+ IL
Sbjct: 25 RFGEIQDLVKS----YYPDADLDLIRAAYVYSAQVHLGQTRRS--GEPYLVHPVAVSMIL 78
Query: 123 THLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHM---TRDER 179
+ + + + LLHDTVEDT T EEIER FG + ++V+ +T + +++ER
Sbjct: 79 AQMK--LDEASVATGLLHDTVEDTLATLEEIERFFGKEIAALVDGVTKISKIEFQSKEER 136
Query: 180 K----RCQILHAPHSSHEAKLVKLADKLHNLRDI 209
+ R IL A +VKLAD+LHN+R +
Sbjct: 137 QAENFRKMIL-AMSRDIRVLMVKLADRLHNMRTL 169
>gi|374575965|ref|ZP_09649061.1| (p)ppGpp synthetase, RelA/SpoT family [Bradyrhizobium sp. WSM471]
gi|374424286|gb|EHR03819.1| (p)ppGpp synthetase, RelA/SpoT family [Bradyrhizobium sp. WSM471]
Length = 761
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q R G PY HP+ VA ILT L K+ + I++ALLHDT+EDT+
Sbjct: 60 RAYVYAMKAHGSQTRAS--GDPYFSHPLEVAAILTDL-KLDD-ATIVAALLHDTIEDTEA 115
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EI++ FGP + ++VE LT K + R+ Q +L A LVKLAD+
Sbjct: 116 TRAEIDQIFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADDVRVLLVKLADR 175
Query: 203 LHNLRDIE 210
LHN+R ++
Sbjct: 176 LHNMRTLD 183
>gi|229492002|ref|ZP_04385819.1| RelA/SpoT family protein [Rhodococcus erythropolis SK121]
gi|453071000|ref|ZP_21974227.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus qingshengii BKS
20-40]
gi|229321134|gb|EEN86938.1| RelA/SpoT family protein [Rhodococcus erythropolis SK121]
gi|452760083|gb|EME18426.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus qingshengii BKS
20-40]
Length = 803
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 74/131 (56%), Gaps = 11/131 (8%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A D A +H QRRK G PYI HP+AVA IL LG + +++ALLHDTVEDT
Sbjct: 102 RAYDVAEDRHSSQRRK--SGDPYITHPLAVASILAELGM--DTTTLVAALLHDTVEDTGY 157
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHM-----TRDERKRCQILHAPHSSHEAKLVKLADKL 203
+ EE+ ++FG V +V+ +T + E R I+ A ++K+AD+L
Sbjct: 158 SLEELTKDFGDEVAHLVDGVTKLDKVVLGTAAEGETIRKMII-AMARDPRVLVIKVADRL 216
Query: 204 HNLRDIERSLP 214
HN+R + R LP
Sbjct: 217 HNMRTM-RFLP 226
>gi|119961938|ref|YP_948033.1| GTP pyrophosphokinase [Arthrobacter aurescens TC1]
gi|119948797|gb|ABM07708.1| putative GTP pyrophosphokinase [Arthrobacter aurescens TC1]
Length = 802
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A A H Q+RK G PYI HPVAVA IL LG + +ALLHDTVEDT
Sbjct: 96 IQRAFAVAEQSHQGQKRK--SGDPYITHPVAVATILAELGMTGT--TLAAALLHDTVEDT 151
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADK 202
T ++ R+FGP V +V+ +T ++ E + + + A ++KLAD+
Sbjct: 152 PYTLADLTRDFGPEVAMLVDGVTKLDKVSFGEAAQSETVRKMVVAMAKDIRVLMIKLADR 211
Query: 203 LHNLR 207
LHN R
Sbjct: 212 LHNAR 216
>gi|291542892|emb|CBL16002.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus bromii L2-63]
Length = 732
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 69/127 (54%), Gaps = 10/127 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA FA H QRR G PYI HPV+VA I+ LG ++ V ALLHDTVEDT
Sbjct: 33 IEKAYKFAEKAHGDQRR--VSGIPYILHPVSVACIVAELGMDTDSVC--GALLHDTVEDT 88
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
T EE+ + FG V +++ +T + R++ Q +L A ++KLA
Sbjct: 89 GVTLEEVTKLFGADVAKLIDGVTKISKIPYSTREQQQAENIRKMLIAMADDIRVIIIKLA 148
Query: 201 DKLHNLR 207
D+LHN+R
Sbjct: 149 DRLHNMR 155
>gi|291458831|ref|ZP_06598221.1| GTP diphosphokinase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291418085|gb|EFE91804.1| GTP diphosphokinase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 753
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 89/180 (49%), Gaps = 18/180 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA + A +H Q+RK G PYI HP+ VA IL L + I + LLHD VEDT
Sbjct: 42 IEKAYEVAKKQHKDQKRK--SGEPYIIHPICVAIILADLQ--MDRETIAAGLLHDVVEDT 97
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ-------ILHAPHSSHEAKLVKL 199
T +E+E+EF P V +V+ +T + D K Q + + ++KL
Sbjct: 98 GMTLQELEKEFNPDVALLVDGVTKLTQINLDVDKVEQQAENLRKMFVSMAKDIRVVIIKL 157
Query: 200 ADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTP 257
AD+LHNLR +E P E++ + + D+ L R + I+ E+D L KY P
Sbjct: 158 ADRLHNLRTLEYQSP-----EKRKEKARESLDIYSPLADRLGISKIKIEMDDLSLKYLEP 212
>gi|283798637|ref|ZP_06347790.1| GTP diphosphokinase [Clostridium sp. M62/1]
gi|291073622|gb|EFE10986.1| HD domain protein [Clostridium sp. M62/1]
Length = 207
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 110 PYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELT 169
PYI HP+ A I++ + + +I +A+LHDT+ED FEE+EREFG RV +V T
Sbjct: 55 PYITHPLDAALIVSSI--TEDEELIAAAILHDTMEDAGVAFEELEREFGSRVAWLVAGET 112
Query: 170 DNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIER 211
++K ERK+ I + + +A+++ L DKL NLR R
Sbjct: 113 EDKSRPWKERKQATIDYLKQADTDARILALGDKLSNLRSTAR 154
>gi|428779441|ref|YP_007171227.1| RelA/SpoT family (p)ppGpp synthetase [Dactylococcopsis salina PCC
8305]
gi|428693720|gb|AFZ49870.1| (p)ppGpp synthetase, RelA/SpoT family [Dactylococcopsis salina PCC
8305]
Length = 762
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 91/184 (49%), Gaps = 17/184 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I A FA H Q R+ G PYI HPVAVA ++ LG S +I + LHD VEDT
Sbjct: 48 IADAFQFAYELHEGQYRRS--GEPYIAHPVAVAGLIRDLGGGS--AMIGAGFLHDIVEDT 103
Query: 147 DTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDERKR---CQILHAPHSSHEAKLVKLA 200
+ T EEIE FG VR +VE +L+ ++ ER+ ++ A +VKLA
Sbjct: 104 EVTCEEIEERFGESVRHLVEGVTKLSKFNFSSKTERQAENFRRMFLAMAKDIRVIVVKLA 163
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R ++ P E++ Q R++ L R + EL+ L KY P
Sbjct: 164 DRLHNMRTLQHLKP-----EKQKQIALETREIFAPLANRLGIGSFKWELEDLSFKYLEPE 218
Query: 259 EGRE 262
+E
Sbjct: 219 AFQE 222
>gi|406926930|gb|EKD63047.1| hypothetical protein ACD_51C00357G0003 [uncultured bacterium]
Length = 640
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 79/152 (51%), Gaps = 16/152 (10%)
Query: 79 HSPDAIMNIVK-ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ PD + +K A FA H RK G PYI HPV A IL + ++ +II+A
Sbjct: 14 YDPDINSDAIKEAYKFADDAHKGVLRK--SGEPYIIHPVGTAMILAEMK--ADKQMIIAA 69
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSS 191
LLHDTVEDT T EI+R FG V +V+ LT + TR + + + S
Sbjct: 70 LLHDTVEDTKVTLAEIKRRFGSEVSLLVDGLTKISTVRYSLQSTRGQISSLRKIFLKMSK 129
Query: 192 H-EAKLVKLADKLHNLRDIERSLPVNWTEERK 222
L+KLAD+LHN+R +E +P E+RK
Sbjct: 130 DLRVVLIKLADRLHNMRTLEFVVP----EKRK 157
>gi|378825349|ref|YP_005188081.1| GTP pyrophosphokinase [Sinorhizobium fredii HH103]
gi|365178401|emb|CCE95256.1| GTP pyrophosphokinase [Sinorhizobium fredii HH103]
Length = 741
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 15/141 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PD A++N KA +A KH Q+R G PYI HP+ VA ILT + + + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGQQKR--ASGDPYISHPLEVAAILTEMHLDESTIAV- 68
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T +EI+ FG + ++VE LT K + +K Q +L A
Sbjct: 69 -ALLHDTIEDTTATRQEIDELFGEDIGALVEGLTKIKKLDLVTKKAKQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 128 DDVRVLLVKLADRLHNMRTLD 148
>gi|326773266|ref|ZP_08232549.1| GTP diphosphokinase [Actinomyces viscosus C505]
gi|326636496|gb|EGE37399.1| GTP diphosphokinase [Actinomyces viscosus C505]
Length = 801
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
IV+A + A H QRRK G PYI HPVAVA IL LG + + +A+LHDTVEDT
Sbjct: 85 IVRAYEVAEKAHSGQRRK--SGEPYITHPVAVATILAELGMTAQ--TLAAAVLHDTVEDT 140
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ----ILHAPHSSHEAKLVKLADK 202
D T E + +FG + +V+ +T + E + + ++ A ++KL D+
Sbjct: 141 DYTLERLRADFGDEISLLVDGVTKLDKLQYGEAAQAETVRKMIIAMSKDIRVLVIKLGDR 200
Query: 203 LHNLR 207
LHN R
Sbjct: 201 LHNAR 205
>gi|295090661|emb|CBK76768.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases
[Clostridium cf. saccharolyticum K10]
Length = 207
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 110 PYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELT 169
PYI HP+ A I++ + + +I +A+LHDT+ED FEE+EREFG RV +V T
Sbjct: 55 PYITHPLDAALIVSSI--TEDEELIAAAILHDTMEDAGVAFEELEREFGSRVAWLVAGET 112
Query: 170 DNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNLRDIER 211
++K ERK+ I + + +A+++ L DKL NLR R
Sbjct: 113 EDKSRPWKERKQATIDYLKQADTDARILALGDKLSNLRSTAR 154
>gi|302527845|ref|ZP_07280187.1| GTP pyrophosphokinase [Streptomyces sp. AA4]
gi|302436740|gb|EFL08556.1| GTP pyrophosphokinase [Streptomyces sp. AA4]
Length = 777
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 76/141 (53%), Gaps = 9/141 (6%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+H + + +A D A H QRRK G PYI HP+AVA IL LG + +++A
Sbjct: 65 LHPNSDLGQLQRAYDVAEELHREQRRK--SGDPYITHPLAVATILAELGM--DTTTLVAA 120
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDT + E+++ +FG +V +V+ +T + + + A
Sbjct: 121 LLHDTVEDTGYSLEQLKADFGDKVGELVDGVTKLDKVKLGTSAEAETIRKMVIAMAKDPR 180
Query: 194 AKLVKLADKLHNLRDIERSLP 214
++KLAD+LHN+R + R LP
Sbjct: 181 VLVIKLADRLHNMRTM-RFLP 200
>gi|329945614|ref|ZP_08293347.1| GTP diphosphokinase [Actinomyces sp. oral taxon 170 str. F0386]
gi|328528617|gb|EGF55582.1| GTP diphosphokinase [Actinomyces sp. oral taxon 170 str. F0386]
Length = 774
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 68/125 (54%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
IV+A + A H QRRK G PYI HPVAVA IL LG + + +A+LHDTVEDT
Sbjct: 58 IVRAYEVAEKAHAGQRRK--SGEPYITHPVAVATILAELGMTAQ--TLAAAVLHDTVEDT 113
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ----ILHAPHSSHEAKLVKLADK 202
D T + + +FG + +V+ +T + E + + ++ A L+KL D+
Sbjct: 114 DYTLDRLRADFGDEITLLVDGVTKLDKLQYGEAAQAETVRKMIIAMSKDIRVLLIKLGDR 173
Query: 203 LHNLR 207
LHN R
Sbjct: 174 LHNAR 178
>gi|307705368|ref|ZP_07642229.1| GTP pyrophosphokinase [Streptococcus mitis SK597]
gi|307621073|gb|EFO00149.1| GTP pyrophosphokinase [Streptococcus mitis SK597]
Length = 740
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVDCHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHEAKLVKLADK 202
T +++EREFGP VR +V+ +L K+ + +E+ ++L A LVKL+D+
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVKYKSHEEQLAENHRKMLMAMSEDIRVILVKLSDR 145
Query: 203 LHNLRDIE 210
LHN+R ++
Sbjct: 146 LHNMRTLK 153
>gi|387878869|ref|YP_006309172.1| GTP pyrophosphokinase [Streptococcus parasanguinis FW213]
gi|386792326|gb|AFJ25361.1| GTP pyrophosphokinase [Streptococcus parasanguinis FW213]
Length = 739
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 74/140 (52%), Gaps = 16/140 (11%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP+ + + KA +A H Q R+ G PYI HP+ VA IL L + V + L
Sbjct: 21 SPEDVAFVQKALVYAVDCHSGQFRQ--SGEPYIIHPIQVAGILAKLK--LDAVTVACGFL 76
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHS 190
HD VEDTD T +++EREFG VR +V+ +T + + + RK +L A
Sbjct: 77 HDVVEDTDATLDDLEREFGHDVRVIVDGVTKLGKVKYKSHEEQLAENHRK---MLMAMSQ 133
Query: 191 SHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 134 DIRVILVKLADRLHNMRTLK 153
>gi|407777106|ref|ZP_11124377.1| (p)ppGpp synthetase I SpoT/RelA [Nitratireductor pacificus pht-3B]
gi|407301271|gb|EKF20392.1| (p)ppGpp synthetase I SpoT/RelA [Nitratireductor pacificus pht-3B]
Length = 750
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 77/143 (53%), Gaps = 19/143 (13%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVV 133
+ PD A++N KA +A KH QRR G PY HP+ VA ILT HL + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGHQRR--ASGDPYFSHPLEVAAILTDMHLDEAT---- 65
Query: 134 IISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHA 187
I ALLHDT+EDT T EI+ FGP + +V+ LT K + +K Q +L A
Sbjct: 66 IAVALLHDTIEDTSATRAEIDELFGPDIGKLVDGLTKLKRLDLVSKKAHQAENLRKLLLA 125
Query: 188 PHSSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 126 ISEDVRVLLVKLADRLHNMRTLD 148
>gi|400294343|ref|ZP_10796138.1| putative GTP diphosphokinase, partial [Actinomyces naeslundii str.
Howell 279]
gi|399900560|gb|EJN83520.1| putative GTP diphosphokinase, partial [Actinomyces naeslundii str.
Howell 279]
Length = 645
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
IV+A + A H QRRK G PYI HPVAVA IL LG + + +A+LHDTVEDT
Sbjct: 58 IVRAYEVAEKAHAGQRRK--SGEPYITHPVAVATILAELGMTAQ--TLAAAVLHDTVEDT 113
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADK 202
D T E + +FG + +V+ +T + E + + + A ++KL D+
Sbjct: 114 DYTLERLRADFGDEITLLVDGVTKLDKLQYGEAAQAETVRKMIIAMSKDIRVLVIKLGDR 173
Query: 203 LHNLR 207
LHN R
Sbjct: 174 LHNAR 178
>gi|337269782|ref|YP_004613837.1| (p)ppGpp synthetase I SpoT/RelA [Mesorhizobium opportunistum
WSM2075]
gi|336030092|gb|AEH89743.1| (p)ppGpp synthetase I, SpoT/RelA [Mesorhizobium opportunistum
WSM2075]
Length = 742
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 75/141 (53%), Gaps = 15/141 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT + + I
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGHQKR--ASGDPYFSHPLEVAAILTEMH--MDEATIA 67
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T EI+ FGP + +VE LT K + +K Q +L A
Sbjct: 68 VALLHDTIEDTTATRAEIDDLFGPEMGKLVEGLTKLKKLDLVSKKAEQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 128 EDVRVLLVKLADRLHNMRTLD 148
>gi|377560470|ref|ZP_09789973.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia otitidis NBRC 100426]
gi|377522332|dbj|GAB35138.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia otitidis NBRC 100426]
Length = 812
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/129 (38%), Positives = 70/129 (54%), Gaps = 9/129 (6%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTT 149
A D A +H Q+RK G PYI HP+AVA IL LG + +++ALLHDTVEDT T
Sbjct: 108 AYDVADERHRGQKRK--SGDPYITHPLAVATILADLGM--DTTTLVAALLHDTVEDTGYT 163
Query: 150 FEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLHN 205
E +E EFG V +V+ +T + + + A ++K+AD+LHN
Sbjct: 164 LEALESEFGAEVAHLVDGVTKLDKVALGSAAEAETIRKMIIAMARDPRVLVIKVADRLHN 223
Query: 206 LRDIERSLP 214
+R + R LP
Sbjct: 224 MRTM-RFLP 231
>gi|148272990|ref|YP_001222551.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830920|emb|CAN01864.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 749
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 9/135 (6%)
Query: 78 MHSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIIS 136
+H P A M+++ +A A H Q+RK G PYI HPVAVA IL LG P + +
Sbjct: 37 LHHPKADMSLIERAYAVAERAHEGQKRK--SGEPYITHPVAVAQILADLG--IGPKTLAA 92
Query: 137 ALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSH 192
ALLHDTVEDT+ T + + +FG + +V+ +T + + + + + A
Sbjct: 93 ALLHDTVEDTEYTLDMLRHDFGDEIAMLVDGVTKLDKLKYGDSAQAETVRKMVVAMSKDI 152
Query: 193 EAKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 153 RVLVVKLADRLHNAR 167
>gi|33866854|ref|NP_898413.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. WH 8102]
gi|33639455|emb|CAE08839.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. WH 8102]
Length = 776
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/135 (40%), Positives = 72/135 (53%), Gaps = 12/135 (8%)
Query: 81 PDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLH 140
P+A++ V A DF H Q R G P I HPVAVA +L +G ++ VI + LH
Sbjct: 65 PEALL--VAAFDFGFQLHEGQFRA--SGDPCIVHPVAVADLLRDIGASAS--VIAAGFLH 118
Query: 141 DTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEA 194
D VEDTD T ++IE FG VR +VE +T + + R Q + A S
Sbjct: 119 DVVEDTDVTPDQIELHFGSEVRELVEGVTKLGGIHFNNRTEAQAENLRRMFLAMASDIRV 178
Query: 195 KLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 179 VLVKLADRLHNMRTL 193
>gi|418096747|ref|ZP_12733858.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16531]
gi|418198472|ref|ZP_12834930.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47778]
gi|421273302|ref|ZP_15724142.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR55]
gi|353768468|gb|EHD48992.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA16531]
gi|353861582|gb|EHE41517.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae GA47778]
gi|395873733|gb|EJG84823.1| bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
pneumoniae SPAR55]
Length = 600
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRVIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|407477775|ref|YP_006791652.1| GTP pyrophosphokinase [Exiguobacterium antarcticum B7]
gi|407061854|gb|AFS71044.1| GTP pyrophosphokinase [Exiguobacterium antarcticum B7]
Length = 732
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 17/184 (9%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +I +A FA +H Q R+ G PYI HPV VA IL +G + I++ALLHD V
Sbjct: 25 VKDIERAYQFAKDEHEGQFRR--SGEPYIIHPVQVAGILVDIG--LDATTIVAALLHDVV 80
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTD-NKHMTRDERKRC-----QILHAPHSSHEAKLV 197
EDTD T EE+ FG V +V+ +T K + +R+ ++ A L+
Sbjct: 81 EDTDITLEELTERFGADVTMLVDGVTKLGKIKYKSKREELAENHRKMFIAMAEDIRVILI 140
Query: 198 KLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYC 255
KLAD+LHN+R ++ + +E++ Q ++ L R + I+ EL+ + +Y
Sbjct: 141 KLADRLHNMRTLQ-----HMVKEKQVQKAEETLEIFAPLAHRLGISTIKWELEDISLRYI 195
Query: 256 TPRE 259
P++
Sbjct: 196 NPQQ 199
>gi|410584315|ref|ZP_11321418.1| (p)ppGpp synthetase, RelA/SpoT family [Thermaerobacter subterraneus
DSM 13965]
gi|410504250|gb|EKP93761.1| (p)ppGpp synthetase, RelA/SpoT family [Thermaerobacter subterraneus
DSM 13965]
Length = 732
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 73/136 (53%), Gaps = 10/136 (7%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
P+ + + +A +F H Q+R G +IEHP+AVA IL L + +++ALL
Sbjct: 23 GPEDLDWLRRAFEFGKAAHQGQKR--ASGQDFIEHPLAVALILADLE--LDAATLVAALL 78
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHE 193
HDTVEDT+ T E++EREFG V +V+ +T + R Q + A
Sbjct: 79 HDTVEDTEVTLEQVEREFGSEVALLVDGVTKLNQIEWRTRLEEQAENLRKMFLAMARDIR 138
Query: 194 AKLVKLADKLHNLRDI 209
L+KLAD+LHN+R +
Sbjct: 139 VVLIKLADRLHNMRTL 154
>gi|22538077|ref|NP_688928.1| GTP pyrophosphokinase [Streptococcus agalactiae 2603V/R]
gi|25011966|ref|NP_736361.1| hypothetical protein gbs1928 [Streptococcus agalactiae NEM316]
gi|76788162|ref|YP_330495.1| GTP pyrophosphokinase [Streptococcus agalactiae A909]
gi|77405021|ref|ZP_00782121.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
H36B]
gi|77407895|ref|ZP_00784647.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
COH1]
gi|339300607|ref|ZP_08649750.1| GTP diphosphokinase [Streptococcus agalactiae ATCC 13813]
gi|417006340|ref|ZP_11944910.1| GTP pyrophosphokinase [Streptococcus agalactiae FSL S3-026]
gi|421146328|ref|ZP_15606044.1| GTP pyrophosphokinase [Streptococcus agalactiae GB00112]
gi|22534982|gb|AAN00801.1|AE014279_8 GTP pyrophosphokinase family protein [Streptococcus agalactiae
2603V/R]
gi|24413508|emb|CAD47587.1| Unknown [Streptococcus agalactiae NEM316]
gi|76563219|gb|ABA45803.1| GTP pyrophosphokinase [Streptococcus agalactiae A909]
gi|77173540|gb|EAO76657.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
COH1]
gi|77176315|gb|EAO79084.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
H36B]
gi|319745978|gb|EFV98261.1| GTP diphosphokinase [Streptococcus agalactiae ATCC 13813]
gi|341576521|gb|EGS26932.1| GTP pyrophosphokinase [Streptococcus agalactiae FSL S3-026]
gi|401686962|gb|EJS82926.1| GTP pyrophosphokinase [Streptococcus agalactiae GB00112]
Length = 738
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 16/130 (12%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTT 149
A ++A+ H++Q RK G PYI HP+ VA IL L + V + LHD VEDT+ T
Sbjct: 31 ALNYATAAHYYQARK--SGEPYIIHPIQVAGILADLH--LDAVTVACGFLHDVVEDTEIT 86
Query: 150 FEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKLA 200
+EIE +FG VR +++ +T + + + RK +L A LVKLA
Sbjct: 87 LDEIETDFGKDVRDIIDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILVKLA 143
Query: 201 DKLHNLRDIE 210
D+LHN+R ++
Sbjct: 144 DRLHNMRTLK 153
>gi|410595250|ref|YP_006951977.1| Bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
agalactiae SA20-06]
gi|410518889|gb|AFV73033.1| Bifunctional (p)ppGpp synthase/hydrolase RelA [Streptococcus
agalactiae SA20-06]
Length = 715
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 16/130 (12%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTT 149
A ++A+ H++Q RK G PYI HP+ VA IL L + V + LHD VEDT+ T
Sbjct: 8 ALNYATAAHYYQARK--SGEPYIIHPIQVAGILADLH--LDAVTVACGFLHDVVEDTEIT 63
Query: 150 FEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKLA 200
+EIE +FG VR +++ +T + + + RK +L A LVKLA
Sbjct: 64 LDEIETDFGKDVRDIIDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILVKLA 120
Query: 201 DKLHNLRDIE 210
D+LHN+R ++
Sbjct: 121 DRLHNMRTLK 130
>gi|421532508|ref|ZP_15978869.1| GTP pyrophosphokinase [Streptococcus agalactiae STIR-CD-17]
gi|403642300|gb|EJZ03157.1| GTP pyrophosphokinase [Streptococcus agalactiae STIR-CD-17]
Length = 738
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 16/130 (12%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTT 149
A ++A+ H++Q RK G PYI HP+ VA IL L + V + LHD VEDT+ T
Sbjct: 31 ALNYATAAHYYQARK--SGEPYIIHPIQVAGILADLH--LDAVTVACGFLHDVVEDTEIT 86
Query: 150 FEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKLA 200
+EIE +FG VR +++ +T + + + RK +L A LVKLA
Sbjct: 87 LDEIETDFGKDVRDIIDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILVKLA 143
Query: 201 DKLHNLRDIE 210
D+LHN+R ++
Sbjct: 144 DRLHNMRTLK 153
>gi|398350680|ref|YP_006396144.1| GTP pyrophosphokinase Rsh [Sinorhizobium fredii USDA 257]
gi|390126006|gb|AFL49387.1| GTP pyrophosphokinase Rsh [Sinorhizobium fredii USDA 257]
Length = 741
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 15/141 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PD A++N KA +A KH Q+R G PYI HP+ VA ILT + + + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGQQKR--ASGDPYISHPLEVAAILTEMHLDESTIAV- 68
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T +EI+ FG + ++VE LT K + +K Q +L A
Sbjct: 69 -ALLHDTIEDTTATRQEIDELFGEDIGALVEGLTKIKKLDLVTKKAKQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 128 DDVRVLLVKLADRLHNMRTLD 148
>gi|423334537|ref|ZP_17312316.1| RelA/SpoT family protein [Parabacteroides distasonis CL03T12C09]
gi|409225728|gb|EKN18646.1| RelA/SpoT family protein [Parabacteroides distasonis CL03T12C09]
Length = 761
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ LG S I SALLHD V
Sbjct: 50 ITKAFNFANQAHAGVKRR--SGEPYIMHPIAVARIVCREMGLGSTS----ICSALLHDVV 103
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDT+ T E+I FG ++ +V+ LT E+ Q +L L+
Sbjct: 104 EDTEYTVEDIRDMFGDKIAQIVDGLTKISGGIFGEQASAQAENFRKLLLTMSDDIRVILI 163
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 164 KIADRLHNMRTLGSMLP 180
>gi|423342874|ref|ZP_17320588.1| RelA/SpoT family protein [Parabacteroides johnsonii CL02T12C29]
gi|409217129|gb|EKN10108.1| RelA/SpoT family protein [Parabacteroides johnsonii CL02T12C29]
Length = 752
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 72/137 (52%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ LG S I SALLHD V
Sbjct: 41 ITKAFNFANQAHAGVKRR--SGEPYIMHPIAVARIVCREMGLGSTS----ICSALLHDVV 94
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDT+ T E+I+ FG ++ +V+ LT E+ Q +L L+
Sbjct: 95 EDTEYTVEDIKDMFGEKIAQIVDGLTKISGGIFGEQASAQAENFRKLLLTMSDDIRVILI 154
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 155 KIADRLHNMRTLGSMLP 171
>gi|420245731|ref|ZP_14749305.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium sp. CF080]
gi|398045823|gb|EJL38509.1| (p)ppGpp synthetase, RelA/SpoT family [Rhizobium sp. CF080]
Length = 738
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 91/184 (49%), Gaps = 19/184 (10%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
+A++N KA +A KH Q+R G PYI HP+ VA ILT + + + + ALLHD
Sbjct: 20 EALLN--KAYVYAMQKHGQQKR--ASGDPYISHPLEVAAILTDMHLDESTIAV--ALLHD 73
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAK 195
T+EDT T EI+ FG + +VE LT K + +K Q +L A
Sbjct: 74 TIEDTTATRAEIDELFGEDIGRLVEGLTKLKRLDLVSKKAKQAENLRKLLLAISDDVRVL 133
Query: 196 LVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNA--PIEAELDALFAK 253
LVKLAD+LHN+R +E + E+K + D+ L G + EL+ L +
Sbjct: 134 LVKLADRLHNMRTLE-----HMKAEQKARISEETMDIYAPLAGRMGMQDMRDELEELSFR 188
Query: 254 YCTP 257
Y P
Sbjct: 189 YMNP 192
>gi|392941128|ref|ZP_10306772.1| LOW QUALITY PROTEIN: (p)ppGpp synthetase, RelA/SpoT family
[Thermoanaerobacter siderophilus SR4]
gi|392292878|gb|EIW01322.1| LOW QUALITY PROTEIN: (p)ppGpp synthetase, RelA/SpoT family
[Thermoanaerobacter siderophilus SR4]
Length = 719
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 13/179 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA DFA + H Q R G PYI HP+ VA+IL L + I + LLHD +EDT
Sbjct: 22 IYKAYDFAVNAHEGQMRNS--GEPYIVHPIEVAYILADLE--LDITTIAAGLLHDVIEDT 77
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
D T++++ FG + +V+ +T + + Q +L A L+KLA
Sbjct: 78 DVTYDQLMENFGKEIADLVDGVTKLGKIEYKSKVEQQAENMRKMLIAMAKDIRVILIKLA 137
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCTPRE 259
D+LHN+R + + LP++ +E+ + + R + I+ EL+ L +Y P E
Sbjct: 138 DRLHNMRTL-KYLPLDKQKEKAEETLEIYAPIAH--RLGISKIKWELEDLCLRYLHPEE 193
>gi|86133427|ref|ZP_01052009.1| GTP pyrophosphokinase, RelA/SpoT family [Polaribacter sp. MED152]
gi|85820290|gb|EAQ41437.1| GTP pyrophosphokinase, RelA/SpoT family [Polaribacter sp. MED152]
Length = 740
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 72/133 (54%), Gaps = 15/133 (11%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H QRRK G PYI HP+AVA I+ LG S I +ALLHD V
Sbjct: 37 IRKAFDIAVDAHSKQRRK--TGEPYIFHPIAVAKIVAMEIGLGATS----IAAALLHDVV 90
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T +++E+ FG + +V LT + +++ Q +L H L+
Sbjct: 91 EDTDYTLDDMEQLFGETIARIVNGLTKISRLNKEQDASIQAENFRKMLLTLHDDVRVILI 150
Query: 198 KLADKLHNLRDIE 210
K+AD+LHN++ ++
Sbjct: 151 KIADRLHNMQTMD 163
>gi|77414296|ref|ZP_00790454.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae 515]
gi|77159641|gb|EAO70794.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae 515]
Length = 738
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 16/130 (12%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTT 149
A ++A+ H++Q RK G PYI HP+ VA IL L + V + LHD VEDT+ T
Sbjct: 31 ALNYATAAHYYQARK--SGEPYIIHPIQVAGILADLH--LDAVTVACGFLHDVVEDTEIT 86
Query: 150 FEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKLA 200
+EIE +FG VR +++ +T + + + RK +L A LVKLA
Sbjct: 87 LDEIETDFGKDVRDIIDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILVKLA 143
Query: 201 DKLHNLRDIE 210
D+LHN+R ++
Sbjct: 144 DRLHNMRTLK 153
>gi|170781154|ref|YP_001709486.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155722|emb|CAQ00843.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 749
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 73/135 (54%), Gaps = 9/135 (6%)
Query: 78 MHSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIIS 136
+H P A M+++ +A A H Q+RK G PYI HPVAVA IL LG P + +
Sbjct: 37 LHHPKADMSLIERAYAVAERAHEGQKRK--SGEPYITHPVAVAQILADLG--IGPKTLAA 92
Query: 137 ALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSH 192
ALLHDTVEDT+ T + + +FG + +V+ +T + + + + + A
Sbjct: 93 ALLHDTVEDTEYTLDMLRHDFGDEIAMLVDGVTKLDKLKYGDSAQAETVRKMVVAMSKDI 152
Query: 193 EAKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 153 RVLVVKLADRLHNAR 167
>gi|150009148|ref|YP_001303891.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Parabacteroides distasonis ATCC 8503]
gi|256841703|ref|ZP_05547209.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Parabacteroides sp. D13]
gi|262384036|ref|ZP_06077172.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Bacteroides sp. 2_1_33B]
gi|298377110|ref|ZP_06987064.1| GTP diphosphokinase [Bacteroides sp. 3_1_19]
gi|149937572|gb|ABR44269.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Parabacteroides distasonis ATCC 8503]
gi|256736597|gb|EEU49925.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Parabacteroides sp. D13]
gi|262294934|gb|EEY82866.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Bacteroides sp. 2_1_33B]
gi|298266094|gb|EFI07753.1| GTP diphosphokinase [Bacteroides sp. 3_1_19]
Length = 773
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ LG S I SALLHD V
Sbjct: 62 ITKAFNFANQAHAGVKRR--SGEPYIMHPIAVARIVCREMGLGSTS----ICSALLHDVV 115
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDT+ T E+I FG ++ +V+ LT E+ Q +L L+
Sbjct: 116 EDTEYTVEDIRDMFGDKIAQIVDGLTKISGGIFGEQASAQAENFRKLLLTMSDDIRVILI 175
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 176 KIADRLHNMRTLGSMLP 192
>gi|423339230|ref|ZP_17316971.1| RelA/SpoT family protein [Parabacteroides distasonis CL09T03C24]
gi|409231132|gb|EKN23989.1| RelA/SpoT family protein [Parabacteroides distasonis CL09T03C24]
Length = 761
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ LG S I SALLHD V
Sbjct: 50 ITKAFNFANQAHAGVKRR--SGEPYIMHPIAVARIVCREMGLGSTS----ICSALLHDVV 103
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDT+ T E+I FG ++ +V+ LT E+ Q +L L+
Sbjct: 104 EDTEYTVEDIRDMFGDKIAQIVDGLTKISGGIFGEQASAQAENFRKLLLTMSDDIRVILI 163
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 164 KIADRLHNMRTLGSMLP 180
>gi|384921368|ref|ZP_10021351.1| metal dependent phosphohydrolase [Citreicella sp. 357]
gi|384464784|gb|EIE49346.1| metal dependent phosphohydrolase [Citreicella sp. 357]
Length = 712
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 71/134 (52%), Gaps = 10/134 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I A DF H Q R G PY HPVAVA ILT + + II+ALLHDT+EDT
Sbjct: 23 IRAAYDFGRAMHDGQMRH--SGEPYFTHPVAVAAILTE--QQLDDATIITALLHDTIEDT 78
Query: 147 DTTFEEIEREFGPRVRSVVEELTD--NKHMTRDERKRCQ----ILHAPHSSHEAKLVKLA 200
++++I FG V +V+ +T N ++ E K+ + + A LVKLA
Sbjct: 79 RASYKDIAERFGSDVAELVDGVTKLTNLQLSSSETKQAENFRKLFMAMSKDLRVILVKLA 138
Query: 201 DKLHNLRDIERSLP 214
D+LHN+R I+ P
Sbjct: 139 DRLHNMRTIKAMRP 152
>gi|337283189|ref|YP_004622660.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 15912]
gi|335370782|gb|AEH56732.1| GTP diphosphokinase [Streptococcus parasanguinis ATCC 15912]
Length = 739
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 76/137 (55%), Gaps = 10/137 (7%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
SP+ + + KA +A H Q R+ G PYI HP+ VA IL L + V + L
Sbjct: 21 SPEDVAFVQKALVYAVDCHSGQFRQ--SGEPYIIHPIQVAGILAKLK--LDAVTVACGFL 76
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHE 193
HD VEDTD T +++EREFG VR +V+ +L K+ + +E+ ++L A
Sbjct: 77 HDVVEDTDATLDDLEREFGHDVRVIVDGVTKLGKVKYKSHEEQLAENHRKMLMAMSQDIR 136
Query: 194 AKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 137 VILVKLADRLHNMRTLK 153
>gi|389776367|ref|ZP_10193890.1| RelA/SpoT family (p)ppGpp synthetase [Rhodanobacter spathiphylli
B39]
gi|388436754|gb|EIL93602.1| RelA/SpoT family (p)ppGpp synthetase [Rhodanobacter spathiphylli
B39]
Length = 721
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 11/138 (7%)
Query: 79 HSPDA-IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ P+A + +++A + H Q RK G PYI HPVAVA IL LG + II+A
Sbjct: 28 YLPEAQVTRVMRAFQIGAQAHAGQERK--SGEPYITHPVAVAGILAELGL--DAETIIAA 83
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRC------QILHAPHSS 191
+LHDT+EDT+ + E+I EFG V +V+ +T M R+ ++L A
Sbjct: 84 ILHDTLEDTELSREDIAAEFGEVVAELVDGVTKLDKMRFGTRQEADAESFRKMLLAMARD 143
Query: 192 HEAKLVKLADKLHNLRDI 209
L+KL+D+LHN+R +
Sbjct: 144 IRVILIKLSDRLHNMRTL 161
>gi|383781444|ref|YP_005466011.1| putative ppGpp synthetase [Actinoplanes missouriensis 431]
gi|381374677|dbj|BAL91495.1| putative ppGpp synthetase [Actinoplanes missouriensis 431]
Length = 830
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 8/125 (6%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA D A+ H Q RK G PYI HP+AVA IL +LG + +++ALLHDT+EDTD
Sbjct: 128 KAFDVAARWHSGQYRK--SGDPYITHPLAVATILANLGM--DTTTLVAALLHDTIEDTDY 183
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLH 204
E++ +FG V +V+ +T + + + + + A ++KLAD+LH
Sbjct: 184 GLEQMRNDFGAEVALLVDGVTKLDRVKLGDAAKAETIRKMVVAMAKDPRVLVIKLADRLH 243
Query: 205 NLRDI 209
N+R +
Sbjct: 244 NMRTL 248
>gi|268611136|ref|ZP_06144863.1| (p)ppGpp synthetase I, SpoT/RelA [Ruminococcus flavefaciens FD-1]
Length = 766
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 10/127 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I+ A +FA+ H Q+R G YI HP+AVA+IL LG ++ I +ALLHD VEDT
Sbjct: 63 IISAYEFAAKAHEGQKR--SSGQDYIIHPLAVAYILLELGMDTD--TICAALLHDVVEDT 118
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHM---TRDERKR---CQILHAPHSSHEAKLVKLA 200
D T +++++ FG V +V+ +T + T++E+ +IL A ++KLA
Sbjct: 119 DATLDDLKKRFGQDVALLVDGVTKLSKIPTSTKEEQAAENIRKILLAMSQDIRVMIIKLA 178
Query: 201 DKLHNLR 207
D+LHN+R
Sbjct: 179 DRLHNMR 185
>gi|403714170|ref|ZP_10940133.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase, partial [Kineosphaera limosa
NBRC 100340]
gi|403211840|dbj|GAB94816.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase, partial [Kineosphaera limosa
NBRC 100340]
Length = 329
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A A H Q+RK G PYI HP+AV IL LG P + +ALLHDTVEDT
Sbjct: 89 IERAYSVAERAHQGQKRKS--GDPYITHPLAVTTILAELGM--TPSTLAAALLHDTVEDT 144
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ----ILHAPHSSHEAKLVKLADK 202
+ +E+ R+FG + +V +T +T E + + ++ A L+KLAD+
Sbjct: 145 AYSLDELRRDFGEEIAQMVNGVTKLDKLTYGEAAQAETVRKMIIAMSRDIRVLLIKLADR 204
Query: 203 LHNLR 207
LHN R
Sbjct: 205 LHNAR 209
>gi|433776113|ref|YP_007306580.1| (p)ppGpp synthetase, RelA/SpoT family [Mesorhizobium australicum
WSM2073]
gi|433668128|gb|AGB47204.1| (p)ppGpp synthetase, RelA/SpoT family [Mesorhizobium australicum
WSM2073]
Length = 742
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 75/141 (53%), Gaps = 15/141 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT + + I
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGHQKR--ASGDPYFSHPLEVAAILTEMH--MDEATIA 67
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T EI+ FGP + +VE LT K + +K Q +L A
Sbjct: 68 VALLHDTIEDTTATRAEIDDLFGPEMGKLVEGLTKLKKLDLVSKKAEQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 128 EDVRVLLVKLADRLHNMRTLD 148
>gi|172058098|ref|YP_001814558.1| (p)ppGpp synthetase I SpoT/RelA [Exiguobacterium sibiricum 255-15]
gi|171990619|gb|ACB61541.1| (p)ppGpp synthetase I, SpoT/RelA [Exiguobacterium sibiricum 255-15]
Length = 732
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 17/184 (9%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +I +A FA +H Q R+ G PYI HPV VA IL +G + I++ALLHD V
Sbjct: 25 VKDIERAYQFAKDEHEGQFRRS--GEPYIIHPVQVAGILVDIG--LDATTIVAALLHDVV 80
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTD-NKHMTRDERKRC-----QILHAPHSSHEAKLV 197
EDTD T EE+ FG V +V+ +T K + +R+ ++ A L+
Sbjct: 81 EDTDITLEELTERFGADVAMLVDGVTKLGKIKYKSKREELAENHRKMFIAMAEDIRVILI 140
Query: 198 KLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYC 255
KLAD+LHN+R ++ + +E++ Q ++ L R + I+ EL+ + +Y
Sbjct: 141 KLADRLHNMRTLQ-----HMVKEKQVQKAEETLEIFAPLAHRLGISTIKWELEDISLRYI 195
Query: 256 TPRE 259
P++
Sbjct: 196 NPQQ 199
>gi|358463265|ref|ZP_09173340.1| (p)ppGpp synthetase I, SpoT/RelA, partial [Frankia sp. CN3]
gi|357070501|gb|EHI80193.1| (p)ppGpp synthetase I, SpoT/RelA, partial [Frankia sp. CN3]
Length = 581
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 79/158 (50%), Gaps = 12/158 (7%)
Query: 60 VHEARLGEAP----DTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHP 115
V R G+ P D ++ H I IV+A + A H Q R+ G PYI HP
Sbjct: 47 VASGRGGQIPPELRDIVEAHRDFHPKAEIGAIVRAYEAAELYHRGQMRR--SGDPYIIHP 104
Query: 116 VAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMT 175
VAVA IL LG + ++++LLHDTVEDT T E + EF V ++V+ +T M
Sbjct: 105 VAVAEILADLG--VDTTTLVASLLHDTVEDTRATLELLTEEFDSEVANLVDGVTKLDKMR 162
Query: 176 RDERKRCQILH----APHSSHEAKLVKLADKLHNLRDI 209
E + L A + L+K+AD+LHN+R +
Sbjct: 163 FGEAAEAETLRKLIVALAKDYRVLLIKIADRLHNMRTL 200
>gi|357061251|ref|ZP_09122010.1| hypothetical protein HMPREF9332_01567 [Alloprevotella rava F0323]
gi|355374760|gb|EHG22052.1| hypothetical protein HMPREF9332_01567 [Alloprevotella rava F0323]
Length = 754
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 70/137 (51%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA H RR+ G PYI HP+AVA I LG S I +ALLHD
Sbjct: 42 ITKAFNFAKQAHKGVRRR--SGEPYILHPIAVAQIACEEIGLGSTS----ICAALLHDVE 95
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E++ FGP+V ++VE LT +R Q +L L+
Sbjct: 96 EDTDYTNEDLSNLFGPKVANIVEGLTKISGGIFGDRASLQAETFKKLLLTMSDDIRVILI 155
Query: 198 KLADKLHNLRDIERSLP 214
K++D+LHN+R + LP
Sbjct: 156 KISDRLHNMRTLSSMLP 172
>gi|319407026|emb|CBI80663.1| GTP pyrophosphokinase [Bartonella sp. 1-1C]
Length = 742
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 80/153 (52%), Gaps = 17/153 (11%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILT--HLGKVSNPVVII 135
+ PD ++++ KA +A KH Q+R G Y HP+ VA ILT HL + + I
Sbjct: 14 YKPDVNVDLLNKAYVYAMQKHGHQKR--ASGDLYFSHPLEVAAILTDMHLDEAT----IA 67
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT+ T EEI++ FG + +VE LT + +K Q +L A
Sbjct: 68 VALLHDTIEDTNATREEIDQLFGSEIGKLVEGLTKLNKLDLVSKKAVQAENLRKLLIAIS 127
Query: 190 SSHEAKLVKLADKLHNLR--DIERSLPVNWTEE 220
LVKLAD+LHN+R D+ R W E
Sbjct: 128 DDIRVLLVKLADRLHNMRTLDVMRDDKRRWIAE 160
>gi|255015757|ref|ZP_05287883.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Bacteroides sp. 2_1_7]
gi|410104784|ref|ZP_11299696.1| RelA/SpoT family protein [Parabacteroides sp. D25]
gi|409233796|gb|EKN26630.1| RelA/SpoT family protein [Parabacteroides sp. D25]
Length = 761
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ LG S I SALLHD V
Sbjct: 50 ITKAFNFANQAHAGVKRR--SGEPYIMHPIAVARIVCREMGLGSTS----ICSALLHDVV 103
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDT+ T E+I FG ++ +V+ LT E+ Q +L L+
Sbjct: 104 EDTEYTVEDIRDMFGDKIAQIVDGLTKISGGIFGEQASAQAENFRKLLLTMSDDIRVILI 163
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 164 KIADRLHNMRTLGSMLP 180
>gi|239624627|ref|ZP_04667658.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239521013|gb|EEQ60879.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 183
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 77/152 (50%), Gaps = 12/152 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A FA H RK + PYI HP+ A I++ + +I +ALLHD +ED
Sbjct: 2 IGEAAVFAERAHRGVFRKGTD-IPYITHPMEAAVIVSAF--TDDEEMIAAALLHDVMEDA 58
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHNL 206
T E+E+ FGPRV +V + +++K T ERK + H +S E K++ L DKL N+
Sbjct: 59 GVTRGELEQAFGPRVAWLVMDESEDKRKTWQERKSYTVRHLMTASREIKILALGDKLSNM 118
Query: 207 RDIERSLPV---------NWTEERKTQYFNWA 229
R R V N ++RK ++ W
Sbjct: 119 RSTARDYLVLGDDIWQRFNEKDKRKHAWYYWG 150
>gi|254383607|ref|ZP_04998957.1| ppGpp synthetase [Streptomyces sp. Mg1]
gi|194342502|gb|EDX23468.1| ppGpp synthetase [Streptomyces sp. Mg1]
Length = 807
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ I +A A H Q+RK G PYI HP+AV IL LG +P +++ LLHDTV
Sbjct: 85 LRQIEQAYQVAERWHRGQKRK--SGDPYITHPLAVTTILAELGM--DPATLMAGLLHDTV 140
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKL 199
EDTD E++ R+FG V +V+ +T + E + + + A ++KL
Sbjct: 141 EDTDYGLEQLRRDFGDAVALLVDGVTKLDRVKFGEAAQAETVRKMVVAMAKDPRVLVIKL 200
Query: 200 ADKLHNLRDI 209
AD+LHN+R +
Sbjct: 201 ADRLHNMRTM 210
>gi|134098602|ref|YP_001104263.1| GTP pyrophosphokinase [Saccharopolyspora erythraea NRRL 2338]
gi|291008201|ref|ZP_06566174.1| GTP pyrophosphokinase [Saccharopolyspora erythraea NRRL 2338]
gi|133911225|emb|CAM01338.1| GTP pyrophosphokinase [Saccharopolyspora erythraea NRRL 2338]
Length = 771
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 9/141 (6%)
Query: 78 MHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+H + + +A D A KH QRRK G PYI HP+AV+ IL LG + +++A
Sbjct: 57 LHPQADLALLQRAYDVAEDKHRDQRRK--SGDPYITHPLAVSTILAELGM--DTTTLVAA 112
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD + E + +FG V +V+ +T + + + A
Sbjct: 113 LLHDTVEDTDYSLERLSGDFGEEVSHLVDGVTKLDKVKLGAAAEAETIRKMIIAMARDPR 172
Query: 194 AKLVKLADKLHNLRDIERSLP 214
++KLAD+LHN+R + R LP
Sbjct: 173 VLVIKLADRLHNMRTM-RFLP 192
>gi|99082405|ref|YP_614559.1| metal dependent phosphohydrolase [Ruegeria sp. TM1040]
gi|99038685|gb|ABF65297.1| metal dependent phosphohydrolase [Ruegeria sp. TM1040]
Length = 710
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 78 MHSPDAIMNIVK-------------ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH 124
M S D ++++V+ A F H Q R G PY HPVAVA ILT
Sbjct: 1 MTSADDLISLVRDYNPKTNEQRLRDAYAFGEEMHDGQFRH--SGEPYFTHPVAVAAILTE 58
Query: 125 LGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD--NKHMTRDERKRC 182
+ + II+ALLHDT+EDT ++EE+ FG V +V+ +T N ++ E K+
Sbjct: 59 --QRLDDATIITALLHDTIEDTKASYEEVSLRFGEEVAMLVDGVTKLTNLQLSSRETKQA 116
Query: 183 Q----ILHAPHSSHEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRG 238
+ + A LVKLAD+LHN+R I P E++ Q D+ L G
Sbjct: 117 ENFRKLFMAMSKDLRVILVKLADRLHNMRTIRAMRP-----EKQAQKARETMDIYAPLAG 171
Query: 239 TNAP--IEAELDALFAKYCTPREGREN 263
+ EL+ L K P EGR++
Sbjct: 172 RMGMQWMREELEDLAFKVLNP-EGRQS 197
>gi|423722702|ref|ZP_17696855.1| RelA/SpoT family protein [Parabacteroides merdae CL09T00C40]
gi|409241975|gb|EKN34740.1| RelA/SpoT family protein [Parabacteroides merdae CL09T00C40]
Length = 752
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 72/137 (52%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ LG S I SALLHD V
Sbjct: 41 ITKAFNFANQAHAGVKRR--SGEPYIMHPIAVARIVCREMGLGSTS----ICSALLHDVV 94
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDT+ T E+I+ FG ++ +V+ LT E+ Q +L L+
Sbjct: 95 EDTEYTVEDIKDMFGEKIAQIVDGLTKISGGIFGEQASAQAENFRKLLLTMSDDIRVILI 154
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 155 KIADRLHNMRTLGSMLP 171
>gi|338213026|ref|YP_004657081.1| (p)ppGpp synthetase I SpoT/RelA [Runella slithyformis DSM 19594]
gi|336306847|gb|AEI49949.1| (p)ppGpp synthetase I, SpoT/RelA [Runella slithyformis DSM 19594]
Length = 753
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 91/190 (47%), Gaps = 30/190 (15%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA + + H RRK G PYI HP+AVA I LG S II ALLHD V
Sbjct: 39 IKKAFNLSVEAHKDMRRK--SGEPYIYHPIAVAQICVEEIGLGTTS----IICALLHDVV 92
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTD--------NKHMTRDERKRCQILHAPHSSHEAK 195
EDTD T ++IER+FG +V +++ LT + RK +L
Sbjct: 93 EDTDFTLQDIERQFGKKVAQIIDGLTKISGQFEFGTSQQAENFRK---MLLTLSDDIRVI 149
Query: 196 LVKLADKLHNLRDIE---RSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFA 252
++KLAD+LHN+R ++ R + E Y A + GL I+ EL+ L+
Sbjct: 150 MIKLADRLHNMRTLDSMARDKQLKIASETIFIYAPLAHRL--GLHS----IKTELEDLYL 203
Query: 253 KYCTPREGRE 262
KY P EG E
Sbjct: 204 KYTEP-EGFE 212
>gi|301310912|ref|ZP_07216841.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Bacteroides sp. 20_3]
gi|300830975|gb|EFK61616.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Bacteroides sp. 20_3]
Length = 773
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ LG S I SALLHD V
Sbjct: 62 ITKAFNFANQAHAGVKRR--SGEPYIMHPIAVARIVCREMGLGSTS----ICSALLHDVV 115
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDT+ T E+I FG ++ +V+ LT E+ Q +L L+
Sbjct: 116 EDTEYTVEDIRDMFGDKIAQIVDGLTKISGGIFGEQASAQAENFRKLLLTMSDDIRVILI 175
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 176 KIADRLHNMRTLGSMLP 192
>gi|218258100|ref|ZP_03474512.1| hypothetical protein PRABACTJOHN_00166 [Parabacteroides johnsonii
DSM 18315]
gi|218225763|gb|EEC98413.1| hypothetical protein PRABACTJOHN_00166 [Parabacteroides johnsonii
DSM 18315]
Length = 764
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 72/137 (52%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ LG S I SALLHD V
Sbjct: 53 ITKAFNFANQAHAGVKRR--SGEPYIMHPIAVARIVCREMGLGSTS----ICSALLHDVV 106
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDT+ T E+I+ FG ++ +V+ LT E+ Q +L L+
Sbjct: 107 EDTEYTVEDIKDMFGEKIAQIVDGLTKISGGIFGEQASAQAENFRKLLLTMSDDIRVILI 166
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 167 KIADRLHNMRTLGSMLP 183
>gi|423346125|ref|ZP_17323813.1| RelA/SpoT family protein [Parabacteroides merdae CL03T12C32]
gi|409220923|gb|EKN13876.1| RelA/SpoT family protein [Parabacteroides merdae CL03T12C32]
Length = 752
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 72/137 (52%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ LG S I SALLHD V
Sbjct: 41 ITKAFNFANQAHAGVKRR--SGEPYIMHPIAVARIVCREMGLGSTS----ICSALLHDVV 94
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDT+ T E+I+ FG ++ +V+ LT E+ Q +L L+
Sbjct: 95 EDTEYTVEDIKDMFGEKIAQIVDGLTKISGGIFGEQASAQAENFRKLLLTMSDDIRVILI 154
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 155 KIADRLHNMRTLGSMLP 171
>gi|154493967|ref|ZP_02033287.1| hypothetical protein PARMER_03312 [Parabacteroides merdae ATCC
43184]
gi|154086227|gb|EDN85272.1| RelA/SpoT family protein [Parabacteroides merdae ATCC 43184]
Length = 764
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 72/137 (52%), Gaps = 15/137 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA+ H +R+ G PYI HP+AVA I+ LG S I SALLHD V
Sbjct: 53 ITKAFNFANQAHAGVKRR--SGEPYIMHPIAVARIVCREMGLGSTS----ICSALLHDVV 106
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDT+ T E+I+ FG ++ +V+ LT E+ Q +L L+
Sbjct: 107 EDTEYTVEDIKDMFGEKIAQIVDGLTKISGGIFGEQASAQAENFRKLLLTMSDDIRVILI 166
Query: 198 KLADKLHNLRDIERSLP 214
K+AD+LHN+R + LP
Sbjct: 167 KIADRLHNMRTLGSMLP 183
>gi|148652387|ref|YP_001279480.1| metal dependent phosphohydrolase [Psychrobacter sp. PRwf-1]
gi|148571471|gb|ABQ93530.1| metal dependent phosphohydrolase [Psychrobacter sp. PRwf-1]
Length = 727
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 74/133 (55%), Gaps = 9/133 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+++A + H +RK G PYI HP+AVA IL G + II+A+LHDTVEDT
Sbjct: 34 VLQACAYGDKAHIKDKRK--SGEPYITHPIAVAEILA--GFRLDRDTIIAAILHDTVEDT 89
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRC-----QILHAPHSSHEAKLVKLAD 201
+ T EEI R FG V S+V+ +T K ++R+ +IL A ++KLAD
Sbjct: 90 EVTSEEITRLFGSTVASLVDGVTKLKSSNHNKRQNKAATFHKILSATLDDPRVLIIKLAD 149
Query: 202 KLHNLRDIERSLP 214
+LHN+ ++ P
Sbjct: 150 RLHNMSTLDSVRP 162
>gi|77411860|ref|ZP_00788193.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
CJB111]
gi|77162081|gb|EAO73059.1| GTP pyrophosphokinase family protein [Streptococcus agalactiae
CJB111]
Length = 738
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 71/130 (54%), Gaps = 16/130 (12%)
Query: 90 ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTT 149
A ++A+ H++Q RK G PYI HP+ VA IL L + V + LHD VEDT+ T
Sbjct: 31 ALNYATAAHYYQARK--SGEPYIIHPIQVAGILADLH--LDAVTVACGFLHDVVEDTEIT 86
Query: 150 FEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKLA 200
+EIE +FG VR +++ +T + + + RK +L A LVKLA
Sbjct: 87 LDEIETDFGKDVRDIIDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDIRVILVKLA 143
Query: 201 DKLHNLRDIE 210
D+LHN+R ++
Sbjct: 144 DRLHNMRTLK 153
>gi|404258414|ref|ZP_10961733.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia namibiensis NBRC
108229]
gi|403402928|dbj|GAC00143.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia namibiensis NBRC
108229]
Length = 784
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A D A +H Q+RK G PYI HP+AVA IL LG + +I+ALLHDTVEDT
Sbjct: 80 RAYDVAEERHSGQKRK--SGDPYITHPLAVATILADLGM--DTTTLIAALLHDTVEDTGY 135
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLH 204
+ + +ER+FG V +V+ +T + + + A ++K+AD+LH
Sbjct: 136 SLQALERDFGQEVAHLVDGVTKLDKVALGSAAEAETIRKMIIAMARDPRVLVIKVADRLH 195
Query: 205 NLRDIERSLP 214
N+R + R LP
Sbjct: 196 NMRTM-RFLP 204
>gi|399887294|ref|ZP_10773171.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
arbusti SL206]
Length = 736
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 93/184 (50%), Gaps = 17/184 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA +FA H Q+R+ G PYI HP VA IL +G N I + LLHD +EDT
Sbjct: 21 INKAYNFAVDAHKKQKRE--SGEPYIIHPEEVACILAEMGMDQN--TIAAGLLHDVIEDT 76
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
+ ++E++ REF V +VE +T ++ ++ Q +L A L+KL+
Sbjct: 77 EYSYEDVTREFNSEVADLVEGVTKLGKISYKTKEEQQADNVRKMLLAMAKDIRVILIKLS 136
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPR 258
D+LHN+R + R + V +E+ + D+ L R + I+ EL+ L +Y P
Sbjct: 137 DRLHNMRTL-RYMSVKKQKEKAKETL----DIFAPLAHRLGISKIKWELEDLAFRYMKPN 191
Query: 259 EGRE 262
E E
Sbjct: 192 EYYE 195
>gi|354594336|ref|ZP_09012375.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Commensalibacter intestini A911]
gi|353672012|gb|EHD13712.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Commensalibacter intestini A911]
Length = 756
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 78/137 (56%), Gaps = 9/137 (6%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
+ PD +++V+ + K H Q+ +D G PYI HP+AVA+IL HL + II+ L
Sbjct: 28 YEPDLDLSLVEKAFQVAFKAHEQQFRD-NGAPYIIHPLAVANILAHLR--VDITSIITGL 84
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHM------TRDERKRCQILHAPHSSH 192
LHDT+EDT+ T E +E+EFG V +V+ +T + T+ +++ A
Sbjct: 85 LHDTIEDTEVTREFLEKEFGVVVADLVDGVTKLTRLELQSDRTKQAENFRKLVLAMSKDI 144
Query: 193 EAKLVKLADKLHNLRDI 209
+VKLAD+LHN+R +
Sbjct: 145 RVLIVKLADRLHNMRTL 161
>gi|333371965|ref|ZP_08463903.1| GTP diphosphokinase [Desmospora sp. 8437]
gi|332975146|gb|EGK12048.1| GTP diphosphokinase [Desmospora sp. 8437]
Length = 737
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 68/132 (51%), Gaps = 17/132 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA FA+ H Q RK G YI HPVAVA IL L + +ISA+LHD VEDT
Sbjct: 45 KAYLFAAEAHRGQTRKS--GEEYIHHPVAVAGILAELQ--MDATTLISAILHDVVEDTGA 100
Query: 149 TFEEIEREFGPRVRSVVEELTDNK----------HMTRDERKRCQILHAPHSSHEAKLVK 198
T E +E EFG V +V+ LT K H + RK + A L+K
Sbjct: 101 TLETVEAEFGETVAQIVDGLTKLKQRMKYKSTAEHQAENHRK---MFVAMAQDIRVILIK 157
Query: 199 LADKLHNLRDIE 210
LAD+LHN+R ++
Sbjct: 158 LADRLHNMRTLK 169
>gi|13476436|ref|NP_108006.1| GTP pyrophosphokinase [Mesorhizobium loti MAFF303099]
gi|14027197|dbj|BAB54151.1| GTP pyrophosphokinase [Mesorhizobium loti MAFF303099]
Length = 742
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 75/141 (53%), Gaps = 15/141 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT + + I
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGHQKR--ASGDPYFSHPLEVAAILTEMH--MDEATIA 67
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T EI+ FGP + +VE LT K + +K Q +L A
Sbjct: 68 VALLHDTIEDTTATRAEIDDLFGPEMGKLVEGLTKLKKLDLVSKKAEQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 128 EDVRVLLVKLADRLHNMRTLD 148
>gi|88809826|ref|ZP_01125332.1| metal dependent phosphohydrolase [Synechococcus sp. WH 7805]
gi|88786210|gb|EAR17371.1| metal dependent phosphohydrolase [Synechococcus sp. WH 7805]
Length = 777
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 61/108 (56%), Gaps = 8/108 (7%)
Query: 108 GTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEE 167
G PYI HPVAVA +L +G ++ VI + LHD VEDTD T E++E FGP VR +VE
Sbjct: 88 GDPYIVHPVAVADLLRDIGASAS--VIAAGFLHDVVEDTDVTPEQLESHFGPEVRGLVEG 145
Query: 168 LTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADKLHNLRDI 209
+T + R Q + A S LVKLAD+LHN+R +
Sbjct: 146 VTKLGGLHFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 193
>gi|374600742|ref|ZP_09673744.1| (p)ppGpp synthetase I, SpoT/RelA [Myroides odoratus DSM 2801]
gi|423325648|ref|ZP_17303488.1| RelA/SpoT family protein [Myroides odoratimimus CIP 103059]
gi|373912212|gb|EHQ44061.1| (p)ppGpp synthetase I, SpoT/RelA [Myroides odoratus DSM 2801]
gi|404605711|gb|EKB05291.1| RelA/SpoT family protein [Myroides odoratimimus CIP 103059]
Length = 738
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 72/133 (54%), Gaps = 15/133 (11%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H QRRK G YI HP+AVA I+ LG S I +AL+HD V
Sbjct: 36 IRKAFDVAVDAHKDQRRKS--GEAYIFHPIAVAKIVASEIGLGATS----IAAALMHDVV 89
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHEAKLV 197
EDTD T ++IE F P++ +VE LT + H++ ++L + L+
Sbjct: 90 EDTDITVKQIEEWFNPKIAQIVEGLTKMALLEPDSHISMQAENYRKMLLTLNDDVRVILI 149
Query: 198 KLADKLHNLRDIE 210
K+AD+LHN++ +E
Sbjct: 150 KIADRLHNMQTME 162
>gi|345009779|ref|YP_004812133.1| (p)ppGpp synthetase I SpoT/RelA [Streptomyces violaceusniger Tu
4113]
gi|344036128|gb|AEM81853.1| (p)ppGpp synthetase I, SpoT/RelA [Streptomyces violaceusniger Tu
4113]
Length = 741
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 84/161 (52%), Gaps = 16/161 (9%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P A ++++ KA A H Q RK G PYI HP+AV IL LG + + ++
Sbjct: 56 HHPGADLDVLRKAYVLAESSHRGQMRK--SGEPYITHPLAVTLILAELG--AETTTLTAS 111
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSH 192
LLHDTVEDT+ T +++ EFG VR +V+ +T D E R ++L A +
Sbjct: 112 LLHDTVEDTEVTLDQVGEEFGEEVRYLVDGVTKLEKVDYGAAAEPETFR-KMLVATGNDV 170
Query: 193 EAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
+KLAD+LHN+R + P E++ + RDV+
Sbjct: 171 RVMSIKLADRLHNMRTLGVMRP-----EKQVRIAKVTRDVL 206
>gi|300725886|ref|ZP_07059349.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Prevotella
bryantii B14]
gi|299776823|gb|EFI73370.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Prevotella
bryantii B14]
Length = 758
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 72/139 (51%), Gaps = 16/139 (11%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA +FA H RR G PYI HP+AVA I LG S I +ALLHD V
Sbjct: 42 ITKAFNFARQAHKGVRR--LSGEPYIMHPIAVAQIACEEMGLGSTS----ISAALLHDVV 95
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDTD T E++E FGP++ +V+ LT ++ Q +L S L+
Sbjct: 96 EDTDYTVEDMENIFGPKIAMIVDGLTKISGGIFGDKASAQAENFKKLLLTMSSDIRVILI 155
Query: 198 KLADKLHNLRDIERSLPVN 216
K+ D+LHN+R +E S P N
Sbjct: 156 KICDRLHNMRTLE-SQPAN 173
>gi|51245757|ref|YP_065641.1| GTP pyrophosphokinase [Desulfotalea psychrophila LSv54]
gi|50876794|emb|CAG36634.1| probable GTP pyrophosphokinase [Desulfotalea psychrophila LSv54]
Length = 702
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 86/178 (48%), Gaps = 26/178 (14%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A DFA H Q RK G YI HP VA IL +++P ++ +ALLHDT+ED +
Sbjct: 30 RALDFAVDAHDDQWRK--SGDAYILHPCYVAKILAGEMDITHPEILAAALLHDTIEDVEE 87
Query: 149 TFEEIERE-FGPRVRSVVEELT------DNKHMTRDERKRCQILHAPHSSHEAKLVKLAD 201
E+ E FG V+++VE T DNK + R +I E LVKLAD
Sbjct: 88 VTAEVVGELFGSYVQAIVEGCTKVTHVSDNKQLNSKRTHR-KIFSGAALRPEVMLVKLAD 146
Query: 202 KLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCTPRE 259
+LHNLR ++ ++P +RK Q + I A L +F +C RE
Sbjct: 147 RLHNLRTLQ-AMP-----KRKRQR----------IADETLDIYAPLATVFGLFCMKRE 188
>gi|357410783|ref|YP_004922519.1| (p)ppGpp synthetase I SpoT/RelA [Streptomyces flavogriseus ATCC
33331]
gi|320008152|gb|ADW03002.1| (p)ppGpp synthetase I, SpoT/RelA [Streptomyces flavogriseus ATCC
33331]
Length = 715
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PDA + I+ KA A H Q RK G PYI HP+AV IL LG + + ++
Sbjct: 53 HHPDADLAILSKAYVLAESSHRGQMRK--SGEPYITHPLAVTLILAELG--AETTTLTAS 108
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSH 192
LLHDTVEDT+ T +++ EFG V +V+ +T D E R ++L A +
Sbjct: 109 LLHDTVEDTEVTLDQVREEFGDEVCYLVDGVTKLEKVDYGAAAEPETFR-KMLVATGNDV 167
Query: 193 EAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
+KLAD+LHN+R + P E++ + RDV+
Sbjct: 168 RVMSIKLADRLHNMRTLGVMRP-----EKQARIAKVTRDVL 203
>gi|443623620|ref|ZP_21108117.1| putative Guanosine tetraphosphate (PpGpp) metabolism protein
[Streptomyces viridochromogenes Tue57]
gi|443342863|gb|ELS57008.1| putative Guanosine tetraphosphate (PpGpp) metabolism protein
[Streptomyces viridochromogenes Tue57]
Length = 723
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 16/161 (9%)
Query: 79 HSPDAIMN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PDA + + +A A H Q RK G PYI HP+AV IL LG + + ++
Sbjct: 47 HHPDADLEPLRRAYVLAESSHRGQMRK--SGEPYITHPLAVTLILAELG--AETTTLTAS 102
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSH 192
LLHDTVEDTD T +++ +FG VR +V+ +T D E R ++L A +
Sbjct: 103 LLHDTVEDTDVTLDQVGEQFGEEVRFLVDGVTKLEKVDYGAAAEPETFR-KMLVATGNDV 161
Query: 193 EAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
+KLAD+LHN+R + P E++ + RDV+
Sbjct: 162 RVMSIKLADRLHNMRTLGVMRP-----EKQARIAKVTRDVL 197
>gi|409390045|ref|ZP_11241816.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Gordonia rubripertincta NBRC
101908]
gi|403199872|dbj|GAB85050.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Gordonia rubripertincta NBRC
101908]
Length = 784
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A D A +H Q+RK G PYI HP+AVA IL LG + +I+ALLHDTVEDT
Sbjct: 80 RAYDVAEERHSGQKRK--SGDPYITHPLAVATILADLGM--DTTTLIAALLHDTVEDTGY 135
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLH 204
+ + +ER+FG V +V+ +T + + + A ++K+AD+LH
Sbjct: 136 SLQALERDFGQEVAHLVDGVTKLDKVALGSAAEAETIRKMIIAMARDPRVLVIKVADRLH 195
Query: 205 NLRDIERSLP 214
N+R + R LP
Sbjct: 196 NMRTM-RFLP 204
>gi|325955369|ref|YP_004239029.1| (p)ppGpp synthetase I SpoT/RelA [Weeksella virosa DSM 16922]
gi|323437987|gb|ADX68451.1| (p)ppGpp synthetase I, SpoT/RelA [Weeksella virosa DSM 16922]
Length = 748
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 72/132 (54%), Gaps = 14/132 (10%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I +A D A H QRRK G PYI HP+AVA I+ LG S I +AL+HD V
Sbjct: 42 IRRAFDLAVDAHKDQRRK--TGEPYIYHPIAVAKIVADEIGLGATS----IAAALMHDVV 95
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDE-----RKRCQILHAPHSSHEAKLVK 198
EDTD T E+IE+ FG ++ +++ LT + + E ++L L+K
Sbjct: 96 EDTDYTLEDIEKLFGKKIAKIIDGLTKISVLNKQEVSIQSENYRKLLLTLSEDVRVILIK 155
Query: 199 LADKLHNLRDIE 210
+AD+LHN+R ++
Sbjct: 156 IADRLHNMRTLD 167
>gi|72162489|ref|YP_290146.1| RelA/SpoT protein [Thermobifida fusca YX]
gi|71916221|gb|AAZ56123.1| RelA/SpoT protein [Thermobifida fusca YX]
Length = 814
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 9/140 (6%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
H I I +A D A+H H Q+RK G PYI HP+AVA IL LG I + L
Sbjct: 108 HPKADIRLIERAYDVAAHYHRSQKRK--SGDPYITHPLAVATILAELGM--QEATIAAGL 163
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEA 194
LHDTVEDT+ T +++ +FG + +V+ +T + E + + + A
Sbjct: 164 LHDTVEDTEYTLDQLRSDFGDEIAELVDGVTKLDKVKYGEATQAETVRKMVVAMARDIRV 223
Query: 195 KLVKLADKLHNLRDIERSLP 214
++KL D+LHN+R + R LP
Sbjct: 224 LVIKLCDRLHNMRTL-RYLP 242
>gi|343924320|ref|ZP_08763871.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia alkanivorans NBRC
16433]
gi|343765754|dbj|GAA10797.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia alkanivorans NBRC
16433]
Length = 787
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 9/130 (6%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A D A +H Q+RK G PYI HP+AVA IL LG + +I+ALLHDTVEDT
Sbjct: 83 RAYDVAEERHSGQKRK--SGDPYITHPLAVATILADLGM--DTTTLIAALLHDTVEDTGY 138
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADKLH 204
+ + +ER+FG V +V+ +T + + + A ++K+AD+LH
Sbjct: 139 SLQALERDFGQEVAHLVDGVTKLDKVALGSAAEAETIRKMIIAMARDPRVLVIKVADRLH 198
Query: 205 NLRDIERSLP 214
N+R + R LP
Sbjct: 199 NMRTM-RFLP 207
>gi|319784510|ref|YP_004143986.1| RelA/SpoT family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170398|gb|ADV13936.1| RelA/SpoT family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 742
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 75/141 (53%), Gaps = 15/141 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PD A++N KA +A KH Q+R G PY HP+ VA ILT + + I
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGHQKR--ASGDPYFSHPLEVAAILTEMH--MDEATIA 67
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T EI+ FGP + +VE LT K + +K Q +L A
Sbjct: 68 VALLHDTIEDTTATRAEIDDLFGPEMGKLVEGLTKLKKLDLVSKKAEQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 128 EDVRVLLVKLADRLHNMRTLD 148
>gi|381200372|ref|ZP_09907512.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Sphingobium yanoikuyae XLDN2-5]
gi|427410391|ref|ZP_18900593.1| RelA/SpoT family protein [Sphingobium yanoikuyae ATCC 51230]
gi|425712524|gb|EKU75539.1| RelA/SpoT family protein [Sphingobium yanoikuyae ATCC 51230]
Length = 701
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 77/138 (55%), Gaps = 11/138 (7%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ PDA ++ +A F+ KH Q+R G PY HP+ VA ILT + I++A
Sbjct: 14 YDPDADEAMINRAYVFSVQKHGSQKR--ASGDPYFSHPIEVAGILTDF--YLDDQTIVTA 69
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSS 191
LLHDT+EDT T++EIE FG V +V+ +L+ + M+ +ER + L A
Sbjct: 70 LLHDTIEDTLVTYDEIEEAFGKDVARMVDGVTKLSKIEAMSENERAAENLRKFLLAMSDD 129
Query: 192 HEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 130 IRVLLVKLADRLHNMRTL 147
>gi|429196014|ref|ZP_19188005.1| putative GTP diphosphokinase [Streptomyces ipomoeae 91-03]
gi|428668278|gb|EKX67310.1| putative GTP diphosphokinase [Streptomyces ipomoeae 91-03]
Length = 681
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 84/161 (52%), Gaps = 16/161 (9%)
Query: 79 HSPDAIMN-IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H PDA ++ + +A A H Q RK G PYI HP+AV IL LG + + ++
Sbjct: 15 HHPDADLDPLRRAYLLAESSHRGQMRKS--GEPYITHPLAVTLILAELG--AETTTLTAS 70
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSH 192
LLHDTVEDTD T +++ +FG VR +V+ +T D E R ++L A +
Sbjct: 71 LLHDTVEDTDVTLDQVREQFGEEVRYLVDGVTKLEKVDYGAAAEPETFR-KMLVATGNDV 129
Query: 193 EAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
+KLAD+LHN+R + P E++ + RDV+
Sbjct: 130 RVMSIKLADRLHNMRTLGVMRP-----EKQERIAKVTRDVL 165
>gi|352089769|ref|ZP_08954074.1| (p)ppGpp synthetase I, SpoT/RelA [Rhodanobacter sp. 2APBS1]
gi|351678937|gb|EHA62080.1| (p)ppGpp synthetase I, SpoT/RelA [Rhodanobacter sp. 2APBS1]
Length = 721
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 79 HSPDA-IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ P+A I +++A + H Q RK G PYI HPVAVA IL LG + II+A
Sbjct: 28 YLPEAQIDRVLRAFQLGAQAHAGQERK--SGEPYITHPVAVAGILAELGL--DAETIIAA 83
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRC------QILHAPHSS 191
+LHDT+EDT+ + E + EFG V +V+ +T M R+ ++L A
Sbjct: 84 ILHDTLEDTELSRETLATEFGEVVAELVDGVTKLDKMRFGSRQEADAESFRKMLLAMARD 143
Query: 192 HEAKLVKLADKLHNLRDI 209
L+KLAD+LHN+R +
Sbjct: 144 IRVILIKLADRLHNMRTL 161
>gi|339624968|ref|ZP_08660757.1| GTP pyrophosphokinase [Fructobacillus fructosus KCTC 3544]
Length = 745
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 78/142 (54%), Gaps = 16/142 (11%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
D + + +A D+AS H Q+R+ G PYI HP+ VA IL L K+ P I++ LHD
Sbjct: 23 DQVKAVTEAYDWASELHKEQKRQ--SGIPYIAHPIQVAGILAEL-KMDGPT-IVAGFLHD 78
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELT--------DNK-HMTRDERKRCQILHAPHSSH 192
VEDT T E++ +FGP V +V+ +T D+K + + RK +L A
Sbjct: 79 IVEDTPVTLEDVVDKFGPVVGRIVDGVTKISKIKYQDSKVQLAENHRK---LLLAMAKDI 135
Query: 193 EAKLVKLADKLHNLRDIERSLP 214
+VKLAD+LHN+R ++ P
Sbjct: 136 RVIIVKLADRLHNMRTLDALRP 157
>gi|418164941|ref|ZP_12801609.1| HD domain protein [Streptococcus pneumoniae GA17371]
gi|353828773|gb|EHE08909.1| HD domain protein [Streptococcus pneumoniae GA17371]
Length = 438
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 16/131 (12%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A H Q RK G PYI HP+ VA IL L + V + LHD VEDTD
Sbjct: 30 KALVYAVECHSGQYRKS--GEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVVEDTDA 85
Query: 149 TFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEAKLVKL 199
T +++EREFGP VR +V+ +T + + + RK +L A LVKL
Sbjct: 86 TLDDLEREFGPDVRMIVDGVTKLGKVEYKSIEEQLAENHRK---MLMAMSEDIRVILVKL 142
Query: 200 ADKLHNLRDIE 210
+D+LHN+R ++
Sbjct: 143 SDRLHNMRTLK 153
>gi|399991326|ref|YP_006571566.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase SpoT
[Phaeobacter gallaeciensis DSM 17395 = CIP 105210]
gi|400755835|ref|YP_006564203.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase SpoT
[Phaeobacter gallaeciensis 2.10]
gi|398654988|gb|AFO88958.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase SpoT
[Phaeobacter gallaeciensis 2.10]
gi|398655881|gb|AFO89847.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase SpoT
[Phaeobacter gallaeciensis DSM 17395 = CIP 105210]
Length = 710
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 90/185 (48%), Gaps = 18/185 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I A F H Q R G PY HPVAVA ILT + + II+ALLHDT+EDT
Sbjct: 23 IADAYAFGEQMHDGQFRH--SGEPYFTHPVAVAAILTE--QRLDDATIITALLHDTIEDT 78
Query: 147 DTTFEEIEREFGPRVRSVVEELTD--NKHMTRDERKRCQ----ILHAPHSSHEAKLVKLA 200
+++EI FG V +V+ +T N ++ E K+ + + A LVKLA
Sbjct: 79 KASYDEISTRFGDEVAMLVDGVTKLTNLQLSSRETKQAENFRKLFMAMSKDLRVILVKLA 138
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAP--IEAELDALFAKYCTPR 258
D+LHN+R I+ P +++ Q D+ L G + EL+ L + P
Sbjct: 139 DRLHNMRTIKAMRP-----DKQAQKARETMDIYAPLAGRMGMQWMREELEDLAFRVLNP- 192
Query: 259 EGREN 263
EGR++
Sbjct: 193 EGRQS 197
>gi|397569561|gb|EJK46819.1| hypothetical protein THAOC_34498 [Thalassiosira oceanica]
Length = 989
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 74/137 (54%), Gaps = 13/137 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA A H Q+RK G PYI HPV VA +L+ G + +++ LLHDTVEDT
Sbjct: 280 IKKALRVAYCAHRPQKRK--SGEPYIIHPVEVALLLS--GMKMDADTVMAGLLHDTVEDT 335
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTR-------DERKRC--QILHAPHSSHEAKLV 197
D TFE+IE FG V+++VE T + + DE+ Q+ A + +V
Sbjct: 336 DLTFEQIEAMFGTEVKNIVEGETKVSKLPKLAFADYADEQAENLRQMFIAMTDDYRIIIV 395
Query: 198 KLADKLHNLRDIERSLP 214
KLAD+LHN+R + P
Sbjct: 396 KLADRLHNMRTLRHMKP 412
>gi|389797244|ref|ZP_10200287.1| RelA/SpoT family (p)ppGpp synthetase [Rhodanobacter sp. 116-2]
gi|388447618|gb|EIM03618.1| RelA/SpoT family (p)ppGpp synthetase [Rhodanobacter sp. 116-2]
Length = 721
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 79 HSPDA-IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ P+A I +++A + H Q RK G PYI HPVAVA IL LG + II+A
Sbjct: 28 YLPEAQIDRVLRAFQLGAQAHAGQERK--SGEPYITHPVAVAGILAELGL--DAETIIAA 83
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRC------QILHAPHSS 191
+LHDT+EDT+ + E + EFG V +V+ +T M R+ ++L A
Sbjct: 84 ILHDTLEDTELSRETLATEFGEVVAELVDGVTKLDKMRFGSRQEADAESFRKMLLAMARD 143
Query: 192 HEAKLVKLADKLHNLRDI 209
L+KLAD+LHN+R +
Sbjct: 144 IRVILIKLADRLHNMRTL 161
>gi|326390128|ref|ZP_08211689.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
200]
gi|325993776|gb|EGD52207.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
200]
Length = 719
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 89/179 (49%), Gaps = 13/179 (7%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I KA DFA + H Q R G PYI HP+ VA+IL L + I + LLHD +EDT
Sbjct: 22 IYKAYDFAVNAHEGQMRNS--GEPYIVHPIEVAYILADLE--LDITTIAAGLLHDVIEDT 77
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
D T++++ FG + +V+ +T + + Q +L A L+KLA
Sbjct: 78 DVTYDQLMENFGKEIADLVDGVTKLGKIEYKSKVEQQAENMRKMLIAMAKDIRVILIKLA 137
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAKYCTPRE 259
D+LHN+R + + LP++ +E+ + + R + I+ EL+ L +Y P E
Sbjct: 138 DRLHNMRTL-KYLPLDKQKEKAEETLEIYAPIAH--RLGISKIKWELEDLCLRYLHPEE 193
>gi|319940232|ref|ZP_08014584.1| GTP pyrophosphokinase [Streptococcus anginosus 1_2_62CV]
gi|319810534|gb|EFW06870.1| GTP pyrophosphokinase [Streptococcus anginosus 1_2_62CV]
Length = 738
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 77/137 (56%), Gaps = 10/137 (7%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S + + + KA +A +H Q R+ G PYI HP+ VA IL L + V + L
Sbjct: 21 SSEDVALVQKALVYAVDRHRGQFRQS--GEPYIIHPIQVAGILAKLK--LDAVSVACGFL 76
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHE 193
HD VEDT+ T +++EREFG VR +V+ +L K+M+ +E+ ++L A
Sbjct: 77 HDVVEDTNATLDDLEREFGHEVRVIVDGVTKLGKVKYMSHEEQLAENHRKMLMAMSKDIR 136
Query: 194 AKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 137 VILVKLADRLHNMRTLK 153
>gi|229495608|ref|ZP_04389341.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Porphyromonas endodontalis ATCC 35406]
gi|229317591|gb|EEN83491.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase
[Porphyromonas endodontalis ATCC 35406]
Length = 758
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 18/139 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I+KA + A+ H RR+ G PYI HP+AVA+I++H LG S I SALLHD +
Sbjct: 50 IIKAFNLANKAHAGVRRRS--GEPYIMHPIAVAYIVSHEMGLGSTS----IASALLHDVI 103
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT--------DNKHMTRDERKRCQILHAPHSSHEAK 195
EDT+ T E I FG ++ +V+ LT D + ++ +++ +
Sbjct: 104 EDTEYTEENIRDMFGDKIAQIVQGLTKISVEMFKDQEDVSAQAENFRKLILTMNDDIRVV 163
Query: 196 LVKLADKLHNLRDIERSLP 214
L+K+AD+LHN+R +E S+P
Sbjct: 164 LIKIADRLHNMRTLE-SMP 181
>gi|227536598|ref|ZP_03966647.1| possible GTP diphosphokinase [Sphingobacterium spiritivorum ATCC
33300]
gi|300773509|ref|ZP_07083378.1| GTP diphosphokinase [Sphingobacterium spiritivorum ATCC 33861]
gi|227243675|gb|EEI93690.1| possible GTP diphosphokinase [Sphingobacterium spiritivorum ATCC
33300]
gi|300759680|gb|EFK56507.1| GTP diphosphokinase [Sphingobacterium spiritivorum ATCC 33861]
Length = 736
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 72/143 (50%), Gaps = 36/143 (25%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H RRK G PYI HP+AVA I LG S I+ ALLHD V
Sbjct: 38 IRKAFDLALESHKEMRRK--SGEPYIFHPIAVAKIAADEIGLGTTS----IVCALLHDVV 91
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAK-------- 195
EDT T +EIE +FG +V +++ LT + + P+SS +A+
Sbjct: 92 EDTAITLQEIEDQFGKKVARIIDGLT-----------KISGIFDPNSSMQAENFRKMLLT 140
Query: 196 --------LVKLADKLHNLRDIE 210
L+KLAD+LHN+R +E
Sbjct: 141 LADDVRVILIKLADRLHNMRTME 163
>gi|331002004|ref|ZP_08325524.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411800|gb|EGG91205.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 762
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 14/186 (7%)
Query: 79 HSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISAL 138
H D I I KA + A H+ QRRK G PYI HP+ VA IL L + I + L
Sbjct: 41 HPSDDISMITKAYELAKTAHNDQRRK--SGEPYIIHPICVAIILAELE--LDKETIAAGL 96
Query: 139 LHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMT-RDERKRCQ------ILHAPHSS 191
LHD +EDT +FEE+ FG V ++V+ +T ++ ++++ Q + A
Sbjct: 97 LHDVIEDTAISFEELSDMFGVDVANLVDGVTKLTQLSLKNDKIEMQAENLRKMFLAMAKD 156
Query: 192 HEAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALF 251
L+KLAD+LHN+R ++ P +E+ + + + Q L G + I+ ELD L
Sbjct: 157 IRVILIKLADRLHNMRTLQYMKPEK-QKEKARETMDIYSPIAQRL-GI-SKIKVELDDLS 213
Query: 252 AKYCTP 257
KY P
Sbjct: 214 LKYLHP 219
>gi|294786983|ref|ZP_06752237.1| GTP diphosphokinase [Parascardovia denticolens F0305]
gi|315226624|ref|ZP_07868412.1| GTP diphosphokinase [Parascardovia denticolens DSM 10105 = JCM
12538]
gi|294485816|gb|EFG33450.1| GTP diphosphokinase [Parascardovia denticolens F0305]
gi|315120756|gb|EFT83888.1| GTP diphosphokinase [Parascardovia denticolens DSM 10105 = JCM
12538]
Length = 789
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P A ++++ +A A +H Q+R+ G PYI HP+AVA IL LG +P V+ +
Sbjct: 40 HYPQADLSVLARAYSRAVTQHAHQQRR--SGEPYIIHPIAVAQILADLGM--SPKVVAAG 95
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG + +V+ +T M + + + + A
Sbjct: 96 LLHDTVEDTDYTLDQCREEFGDTITGLVDGVTKLTKMDFGDHAQAETIRKMVIAMSRDVR 155
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
+VKLAD++HN R R + V+ ++ + + + L G NA I+ EL+ L K
Sbjct: 156 VLVVKLADRVHNAR-TWRYVKVSNARKKAQETLDVYSPLANRL-GMNA-IKTELEELSFK 212
Query: 254 YCTPR 258
P+
Sbjct: 213 ALHPK 217
>gi|302872388|ref|YP_003841024.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor obsidiansis
OB47]
gi|302575247|gb|ADL43038.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor obsidiansis
OB47]
Length = 722
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 90/186 (48%), Gaps = 17/186 (9%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S + I I KA +FA H Q R G PYI HP+ VA IL L + I++ LL
Sbjct: 17 SEEDIDLIKKAFEFAQKYHEGQAR--SSGEPYIVHPLEVALILADLE--LDIASIVAGLL 72
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTD------NKHMTRDERKRCQILHAPHSSHE 193
HD VEDT + E+IEREFG + +V+ +T + R ++L A
Sbjct: 73 HDVVEDTSASLEDIEREFGKEIAELVDGVTKLGKLEFTSKLERQAENYRKMLIAMAKDIR 132
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALF 251
L+KLAD+LHN+R ++ P E++ Q D+ L R + I+ EL+ L
Sbjct: 133 VILIKLADRLHNMRTLKYLPP-----EKQRQKAQETIDIYAPLVHRLGISKIKWELEDLS 187
Query: 252 AKYCTP 257
+Y P
Sbjct: 188 LRYLDP 193
>gi|289706223|ref|ZP_06502586.1| GTP diphosphokinase [Micrococcus luteus SK58]
gi|289557062|gb|EFD50390.1| GTP diphosphokinase [Micrococcus luteus SK58]
Length = 759
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 72/128 (56%), Gaps = 8/128 (6%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ +IV+A + A H Q R+ G PYI HPVAVA IL +G V+ P +++ALLHDTV
Sbjct: 48 LADIVRAFEVARAAHEGQMRR--SGDPYITHPVAVATILAEIG-VTGPT-LLAALLHDTV 103
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKL 199
EDTD + E + +FG V +V+ +T +T + + + A L+KL
Sbjct: 104 EDTDYSLERLRADFGSDVALLVDGVTKLDKVTYGAAAQAETVRKMVIAMAQDVNVLLIKL 163
Query: 200 ADKLHNLR 207
AD+LHN R
Sbjct: 164 ADRLHNAR 171
>gi|420236846|ref|ZP_14741323.1| GTP pyrophosphokinase/Guanosine
3',5'-bis(Diphosphate)3'-pyrophosphohydrolase
[Parascardovia denticolens IPLA 20019]
gi|391879949|gb|EIT88449.1| GTP pyrophosphokinase/Guanosine
3',5'-bis(Diphosphate)3'-pyrophosphohydrolase
[Parascardovia denticolens IPLA 20019]
Length = 789
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 96/185 (51%), Gaps = 12/185 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P A ++++ +A A +H Q+R+ G PYI HP+AVA IL LG +P V+ +
Sbjct: 40 HYPQADLSVLTRAYSRAVTQHAHQQRR--SGEPYIIHPIAVAQILADLGM--SPKVVAAG 95
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG + +V+ +T M + + + + A
Sbjct: 96 LLHDTVEDTDYTLDQCREEFGDTITGLVDGVTKLTKMDFGDHAQAETIRKMVIAMSRDVR 155
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNAPIEAELDALFAK 253
+VKLAD++HN R R + V+ ++ + + + L G NA I+ EL+ L K
Sbjct: 156 VLVVKLADRVHNAR-TWRYVKVSNARKKAQETLDVYSPLANRL-GMNA-IKTELEELSFK 212
Query: 254 YCTPR 258
P+
Sbjct: 213 ALHPK 217
>gi|50954753|ref|YP_062041.1| GTP pyrophosphokinase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50951235|gb|AAT88936.1| GTP pyrophosphokinase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 758
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P A ++++ +A A H Q+R+ G PYI HPVAVA I+ LG + I +A
Sbjct: 48 HDPKADLSLIERAYAVAEGAHSGQKRR--SGEPYITHPVAVAQIIADLGVGAK--TIAAA 103
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ----ILHAPHSSHE 193
LLHDTVEDTD T +E+ +FG + +V+ +T + + + + ++ A
Sbjct: 104 LLHDTVEDTDYTLDEVRDQFGGEIAMLVDGVTKLDKVKYGDSAQAETVRKMIVAMSKDIR 163
Query: 194 AKLVKLADKLHNLR 207
+VKLAD+LHN R
Sbjct: 164 VLIVKLADRLHNAR 177
>gi|400288863|ref|ZP_10790895.1| metal dependent phosphohydrolase [Psychrobacter sp. PAMC 21119]
Length = 728
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 77/134 (57%), Gaps = 9/134 (6%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+IV A +F H +RK G PYI HP+AVA IL G + II+A+LHDTVED
Sbjct: 34 DIVDACEFGDIAHIKDKRK--SGEPYITHPIAVAEILA--GFRLDRDTIIAAILHDTVED 89
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRC-----QILHAPHSSHEAKLVKLA 200
TD + E+IE+ +G V +V+ +T K T ++++ +IL A + ++KLA
Sbjct: 90 TDVSDEQIEQRYGKVVARLVDGVTKLKSSTHNKQQNKAATFHKILTATLADPRVLIIKLA 149
Query: 201 DKLHNLRDIERSLP 214
D+LHN+ ++ P
Sbjct: 150 DRLHNMSTLDAVRP 163
>gi|453052250|gb|EME99736.1| (p)ppGpp synthetase I SpoT/RelA [Streptomyces mobaraensis NBRC
13819 = DSM 40847]
Length = 715
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 16/161 (9%)
Query: 79 HSPDAIMNIVK-ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P A ++I++ A FA H Q RK G P+I HP+AV IL LG + + ++
Sbjct: 52 HHPGADLDILRRAYLFAESSHRGQTRK--SGGPFITHPLAVTLILAELG--AETTTLTAS 107
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-----DNKHMTRDERKRCQILHAPHSSH 192
LLHDTVEDT+ T +++ FG VR +V+ +T D E R ++L A +
Sbjct: 108 LLHDTVEDTEVTLDQVGERFGAEVRFLVDGVTKLEKVDYGAAAEPETFR-KMLVATGNDV 166
Query: 193 EAKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVV 233
+KLAD+LHN+R + P E++ + RDV+
Sbjct: 167 RVMSIKLADRLHNMRTLGVMRP-----EKQARIAKVTRDVL 202
>gi|410460170|ref|ZP_11313853.1| metal dependent phosphohydrolase [Bacillus azotoformans LMG 9581]
gi|409927400|gb|EKN64536.1| metal dependent phosphohydrolase [Bacillus azotoformans LMG 9581]
Length = 183
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 17/163 (10%)
Query: 85 MNIVK-ATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
MN++ A +FA+ H Q RK+ + PYI HPV V IL G + I++ +LHDT+
Sbjct: 1 MNLIDYAIEFAATAHRNQFRKETD-IPYISHPVGVGMILQKAG--CSEEAIVAGILHDTL 57
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTD-NKHMTRDERKRCQILHAPHSSHEAKLVKLADK 202
EDT+TT +I FG V ++V+ ++ +K + ++RK+ I + + + V ADK
Sbjct: 58 EDTETTEADILNNFGEEVLNIVKGCSEPDKGASWEDRKKHTIEYLKSAPLLIREVACADK 117
Query: 203 LHNLRDIERSLP----VNWTE-----ERKTQYFNWARDVVQGL 236
LHNLR I R L W + E++ Y+ R++++ L
Sbjct: 118 LHNLRSINRDLTNLGEATWEKFKRGREKQEWYY---RNIIESL 157
>gi|339640594|ref|ZP_08662038.1| GTP diphosphokinase [Streptococcus sp. oral taxon 056 str. F0418]
gi|339453863|gb|EGP66478.1| GTP diphosphokinase [Streptococcus sp. oral taxon 056 str. F0418]
Length = 738
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 16/140 (11%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
S + + + KA +A H Q RK G PYI HP+ VA IL L + V + L
Sbjct: 21 SAEDVAFVQKALIYAVDCHSGQFRKS--GEPYIVHPIQVAGILAKLK--LDAVTVACGFL 76
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHS 190
HD VEDTD T +++EREFG VR +V+ +T + + + RK +L A
Sbjct: 77 HDVVEDTDATLDDLEREFGSDVRVIVDGVTKLGKVKYKSHEEQLAENHRK---MLMAMSE 133
Query: 191 SHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 134 DIRVILVKLADRLHNMRTLK 153
>gi|304392075|ref|ZP_07374017.1| GTP diphosphokinase [Ahrensia sp. R2A130]
gi|303296304|gb|EFL90662.1| GTP diphosphokinase [Ahrensia sp. R2A130]
Length = 750
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 10/127 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H+H Q R G PY HP+ VA I+T L + +++ALLHDT+EDTD+
Sbjct: 25 RAYVYAMHQHRHQTRT--SGDPYFTHPLEVASIVTDLKL--DQASVVAALLHDTIEDTDS 80
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHM------TRDERKRCQILHAPHSSHEAKLVKLADK 202
T EI+ +FG + +V+ LT K + TR ++L A LVKLAD+
Sbjct: 81 TRAEIDAKFGKEIGELVQGLTKLKGIELVSKKTRQGENLRRLLIAIADDVRVLLVKLADR 140
Query: 203 LHNLRDI 209
LHN+R +
Sbjct: 141 LHNMRTL 147
>gi|453364898|dbj|GAC79531.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia malaquae NBRC 108250]
Length = 738
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 11/143 (7%)
Query: 77 GMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIIS 136
G++ + + +A D A +H Q RK G PYI HP+AVA IL LG + +++
Sbjct: 22 GVYPKADVTVLQQAYDVAEQRHTGQFRKS--GDPYITHPLAVATILADLGM--DTTTLVA 77
Query: 137 ALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHM-----TRDERKRCQILHAPHSS 191
ALLHDTVEDT + EE+E++FG V +V+ +T + E R I+ A
Sbjct: 78 ALLHDTVEDTGYSLEELEKDFGAEVAHLVDGVTKLDKVALGSAAEGETIRKMII-AMARD 136
Query: 192 HEAKLVKLADKLHNLRDIERSLP 214
++K+AD+LHN+R + R LP
Sbjct: 137 PRVLVIKVADRLHNMRTM-RFLP 158
>gi|421782283|ref|ZP_16218740.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Serratia plymuthica A30]
gi|407755524|gb|EKF65650.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Serratia plymuthica A30]
Length = 206
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/126 (38%), Positives = 69/126 (54%), Gaps = 7/126 (5%)
Query: 89 KATDFASHKHH-FQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTD 147
KA FA+ H ++++ G PYI HP AV +L P +I +A LHDTVEDT
Sbjct: 6 KARRFATAAHESCKQKRKFTGEPYIVHPTAVVALLQQAD--PTPEMIAAAWLHDTVEDTP 63
Query: 148 TTFEEIEREFGPRVRSVVEELTDNKHMT----RDERKRCQILHAPHSSHEAKLVKLADKL 203
T +I REFGP+V VE LTD + + R RK + H+ + EA+ +KL D +
Sbjct: 64 VTLADIRREFGPKVERYVEMLTDVQTRSYGGERLHRKNANLQHSALACPEAQTIKLCDLI 123
Query: 204 HNLRDI 209
N ++I
Sbjct: 124 DNSKNI 129
>gi|310658609|ref|YP_003936330.1| GTP pyrophosphokinase [[Clostridium] sticklandii]
gi|308825387|emb|CBH21425.1| GTP pyrophosphokinase [[Clostridium] sticklandii]
Length = 729
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 79/140 (56%), Gaps = 13/140 (9%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
++PDA ++IV KA ++A + H Q RK G YI HP+ VA IL L + I +
Sbjct: 12 YNPDADLDIVIKAYNYAYNAHEGQYRK--SGEKYIIHPLEVAKILAELE--LDVFTIAAG 67
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELT-------DNKHMTRDERKRCQILHAPHS 190
L+HD VEDT+ +F +IER FG V +V+ +T +K T+ E R ++ A
Sbjct: 68 LMHDVVEDTEVSFSDIERLFGTEVAELVDGVTKLGKIEYKSKEETQAENLR-KMFMAMGK 126
Query: 191 SHEAKLVKLADKLHNLRDIE 210
L+KLAD+LHN+R ++
Sbjct: 127 DIRVILIKLADRLHNMRTLK 146
>gi|402837012|ref|ZP_10885543.1| putative GTP diphosphokinase [Mogibacterium sp. CM50]
gi|402270028|gb|EJU19297.1| putative GTP diphosphokinase [Mogibacterium sp. CM50]
Length = 732
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
+VKA + A+ H Q RK G PYI HP+AV+ IL G + II+ L+HD VEDT
Sbjct: 29 VVKAFEIANRLHSGQLRK--SGEPYIIHPIAVSFILATFG--MDTETIIAGLMHDVVEDT 84
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLA 200
T E++ +FG + +V+ +T ++ D ++ Q + A ++KLA
Sbjct: 85 PYTREQLVEDFGEEIALLVDGVTKLGNIKYDSKEELQAENFRKMFLAMSKDIRVLIIKLA 144
Query: 201 DKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGLRGTNA--PIEAELDALFAKYCTPR 258
D+LHN+R +E +P EE+ + ++ L G I+ EL+ L Y P
Sbjct: 145 DRLHNMRTLE-YMPTTKREEKALETL----EIYAPLAGRLGIYSIKFELEDLALMYLHPT 199
Query: 259 EGRE 262
E RE
Sbjct: 200 EYRE 203
>gi|6136306|gb|AAF04327.1| RelA/SpoT homolog [Bradyrhizobium japonicum]
Length = 779
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q R G PY HP+ VA ILT L K+ + I++ALLHDT+EDT+
Sbjct: 75 RAYVYAMKAHGSQTRAS--GDPYFSHPLEVAAILTDL-KLDD-ATIVAALLHDTIEDTEA 130
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EI++ FGP + ++VE LT K + R+ Q +L A LVKLAD+
Sbjct: 131 TRAEIDQIFGPEICALVEGLTKLKRLELVSREAKQAENLRKLLLAIADDVRVLLVKLADR 190
Query: 203 LHNLRDIE 210
LHN+R +E
Sbjct: 191 LHNMRTLE 198
>gi|343085524|ref|YP_004774819.1| (p)ppGpp synthetase I SpoT/RelA [Cyclobacterium marinum DSM 745]
gi|342354058|gb|AEL26588.1| (p)ppGpp synthetase I, SpoT/RelA [Cyclobacterium marinum DSM 745]
Length = 739
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 17/137 (12%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA + AS H RRK G PYI HP+ VA I LG S II+ALLHD V
Sbjct: 36 IKKAFNVASEAHKEMRRK--SGEPYIYHPLEVALICVEEIGLGTTS----IIAALLHDVV 89
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELT------DNKHMTRDERKRCQILHAPHSSHEAKLV 197
EDTD E+IEREFG +V +++ LT D + E R ++L L+
Sbjct: 90 EDTDMELEDIEREFGVKVAQIIDGLTKIAGVFDYGSSQQAENFR-KMLLTLSDDVRVILI 148
Query: 198 KLADKLHNLRDIERSLP 214
KLAD+L+N+R ++ S+P
Sbjct: 149 KLADRLNNMRTLD-SMP 164
>gi|148240678|ref|YP_001226065.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. WH 7803]
gi|147849217|emb|CAK24768.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. WH 7803]
Length = 797
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 61/108 (56%), Gaps = 8/108 (7%)
Query: 108 GTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEE 167
G PYI HPVAVA +L +G ++ VI + LHD VEDTD T E++E FGP VR +VE
Sbjct: 108 GDPYIVHPVAVADLLRDIGASAS--VIAAGFLHDVVEDTDVTPEQLESHFGPEVRELVEG 165
Query: 168 LTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADKLHNLRDI 209
+T + R Q + A S LVKLAD+LHN+R +
Sbjct: 166 VTKLGGLHFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 213
>gi|334140425|ref|YP_004533627.1| GTP pyrophosphokinase [Novosphingobium sp. PP1Y]
gi|333938451|emb|CCA91809.1| GTP pyrophosphokinase [Novosphingobium sp. PP1Y]
Length = 697
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 77/136 (56%), Gaps = 12/136 (8%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
+ +A++N +A + KH Q+R G PY HPV VA ++T L + II+ALL
Sbjct: 18 ADEALLN--RAYVYTVQKHGTQKR--ASGDPYFSHPVEVAGLMTELK--LDQQAIITALL 71
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHE 193
HDTVEDT T EEIE+ FG + +V+ +L+ + MT +ER + L A
Sbjct: 72 HDTVEDTLATIEEIEKLFGADIARLVDGVTKLSKIEVMTENERAAENLRKFLLAMSEDLR 131
Query: 194 AKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 132 VLLVKLADRLHNMRTL 147
>gi|56421113|ref|YP_148431.1| GTP pyrophosphokinase [Geobacillus kaustophilus HTA426]
gi|375009672|ref|YP_004983305.1| GTP pyrophosphokinase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56380955|dbj|BAD76863.1| GTP pyrophosphokinase (ppGpp synthetase) [Geobacillus kaustophilus
HTA426]
gi|359288521|gb|AEV20205.1| GTP pyrophosphokinase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 732
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +FA H H Q RK G PYI HP+ VA IL L + I + LHD +EDT+
Sbjct: 30 KAYEFAKHAHRDQFRKS--GEPYIIHPIQVAGILVDLK--MDATTIAAGFLHDVIEDTEA 85
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDERK---RCQILHAPHSSHEAKLVKLADK 202
T E++EREFG V +V+ +L K+ +++E++ ++ A L+KLAD+
Sbjct: 86 TKEDLEREFGAEVAMLVDGVTKLGKIKYKSQEEQQAENHRKMFLAMAQDIRVILIKLADR 145
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
LHN+R + + LP E++ + N ++ L R + I+ EL+ +Y P++
Sbjct: 146 LHNMRTL-KHLPA----EKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQ 199
>gi|410724219|ref|ZP_11363418.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. Maddingley
MBC34-26]
gi|410602505|gb|EKQ56985.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. Maddingley
MBC34-26]
Length = 738
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 80/136 (58%), Gaps = 14/136 (10%)
Query: 85 MNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+N+V KA FA H Q+R+ G PYI HP+AVA IL LG +N I++ LLHD +
Sbjct: 18 VNMVEKAYHFAEQAHKDQKRE--SGEPYIIHPIAVAEILAELGMDTN--TIVAGLLHDVI 73
Query: 144 EDTDTTFEEIEREFGPRVRSVVE------ELTDNKHMTRDERKRCQI---LHAPHSSHEA 194
EDTD +++E + F + ++VE +L + ++ T++E++ + L A
Sbjct: 74 EDTDCSYDETVKLFNAEIANLVEGVTKLTKLGEMEYKTKEEQQADNVRKMLLAMAKDIRV 133
Query: 195 KLVKLADKLHNLRDIE 210
++KLAD+LHN+R ++
Sbjct: 134 IIIKLADRLHNMRTLK 149
>gi|288817459|ref|YP_003431806.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenobacter thermophilus TK-6]
gi|384128229|ref|YP_005510842.1| (p)ppGpp synthetase I SpoT/RelA [Hydrogenobacter thermophilus TK-6]
gi|288786858|dbj|BAI68605.1| (p)ppGpp 3-pyrophosphohydrolase [Hydrogenobacter thermophilus TK-6]
gi|308751066|gb|ADO44549.1| (p)ppGpp synthetase I, SpoT/RelA [Hydrogenobacter thermophilus
TK-6]
Length = 699
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 74/127 (58%), Gaps = 10/127 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA DF +H Q R G PYI HP+ VA L +G ++ I++ALLHD +EDT T
Sbjct: 27 KAIDFIEERHEHQVR--ASGEPYIMHPIEVAITLAEMGLDAD--TIVAALLHDVLEDTPT 82
Query: 149 TFEEIEREFGPRVRSVVEELTD-NKHMTRD-ERKRCQ----ILHAPHSSHEAKLVKLADK 202
T++E++ +FG V +V+ +T K +D ER++ + +L A LVKLAD+
Sbjct: 83 TYQELKEKFGQGVADIVQGVTKLGKFEFKDMERQKAENYRKLLLATAKDLRVILVKLADR 142
Query: 203 LHNLRDI 209
LHN++ +
Sbjct: 143 LHNMKTL 149
>gi|213691862|ref|YP_002322448.1| (p)ppGpp synthetase I SpoT/RelA [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|384199005|ref|YP_005584748.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|213523323|gb|ACJ52070.1| (p)ppGpp synthetase I, SpoT/RelA [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|320457957|dbj|BAJ68578.1| GTP pyrophosphokinase [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
Length = 774
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 93/191 (48%), Gaps = 24/191 (12%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
H P ++I+ +A A +H QRRK G PYI HP+AV+ IL LG P+V+ +
Sbjct: 36 HHPGEDLSILDRAYRRAVIQHCTQRRK--SGEPYIVHPLAVSQILADLGM--GPIVVAAG 91
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHE 193
LLHDTVEDTD T ++ EFG V +V+ +T + + + + + A
Sbjct: 92 LLHDTVEDTDYTLDQCRAEFGDTVAGLVDGVTKLSQLEVGDSAQAETIRKLVVAMSRDVR 151
Query: 194 AKLVKLADKLHNLRDIERSLPVNWTEERKTQYFNWAR---DVVQGLR---GTNAPIEAEL 247
+VKLAD++HN R W + T AR DV L G NA I+ EL
Sbjct: 152 TLVVKLADRVHNAR--------TWRYVKTTSAQRKARETLDVYAPLANRLGMNA-IKTEL 202
Query: 248 DALFAKYCTPR 258
+ L K P+
Sbjct: 203 EELSFKVLYPK 213
>gi|150395901|ref|YP_001326368.1| (p)ppGpp synthetase I SpoT/RelA [Sinorhizobium medicae WSM419]
gi|150027416|gb|ABR59533.1| (p)ppGpp synthetase I, SpoT/RelA [Sinorhizobium medicae WSM419]
Length = 741
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 15/141 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PD A++N KA +A KH Q+R G PYI HP+ VA ILT + + + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGQQKR--ASGDPYISHPLEVAAILTEMHLDESTIAV- 68
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T +EI+ FG + ++VE LT K + +K Q +L A
Sbjct: 69 -ALLHDTIEDTTATRQEIDGLFGEDIGALVEGLTKIKKLDLVTKKAKQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 128 DDVRVLLVKLADRLHNMRTLD 148
>gi|10443847|gb|AAG17607.1|AF242653_1 ppGpp synthetase/hydrolase Rel [Geobacillus stearothermophilus ATCC
7953]
Length = 732
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +FA H H Q RK G PYI HP+ VA IL L + I + LHD +EDT+
Sbjct: 30 KAYEFAKHAHRDQFRKS--GEPYIIHPIQVAGILVDLK--MDATTIAAGFLHDVIEDTEA 85
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDERK---RCQILHAPHSSHEAKLVKLADK 202
T E++EREFG V +V+ +L K+ +++E++ ++ A L+KLAD+
Sbjct: 86 TKEDLEREFGAEVAMLVDGVTKLGKIKYKSQEEQQAENHRKMFLAMAQDIRVILIKLADR 145
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
LHN+R + + LP E++ + N ++ L R + I+ EL+ +Y P++
Sbjct: 146 LHNMRTL-KHLPA----EKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQ 199
>gi|407646893|ref|YP_006810652.1| GTP pyrophosphokinase [Nocardia brasiliensis ATCC 700358]
gi|407309777|gb|AFU03678.1| GTP pyrophosphokinase [Nocardia brasiliensis ATCC 700358]
Length = 795
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 79/139 (56%), Gaps = 10/139 (7%)
Query: 81 PDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
P A + ++ +A D A +H Q RK G PYI HP+AVA+IL LG + +++ALL
Sbjct: 85 PKANLTLLQRAFDVADERHKHQFRK--SGDPYITHPLAVANILAELGM--DTTTLVAALL 140
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTD----NKHMTRDERKRCQILHAPHSSHEAK 195
HDTVEDT + E++ +FGP V +V+ +T N + +++ A
Sbjct: 141 HDTVEDTGYSLEQLTLDFGPEVAHLVDGVTKLDKVNLGAAAEAETIRKMIIAMARDPRVL 200
Query: 196 LVKLADKLHNLRDIERSLP 214
++K+AD+LHN+R + R LP
Sbjct: 201 VIKVADRLHNMRTM-RFLP 218
>gi|15964818|ref|NP_385171.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein
[Sinorhizobium meliloti 1021]
gi|334315609|ref|YP_004548228.1| (p)ppGpp synthetase I SpoT/RelA [Sinorhizobium meliloti AK83]
gi|384528777|ref|YP_005712865.1| (p)ppGpp synthetase I SpoT/RelA [Sinorhizobium meliloti BL225C]
gi|384535182|ref|YP_005719267.1| putative GTP pyrophosphokinase (ATP:GTP 3'- pyrophosphotransferase)
protein [Sinorhizobium meliloti SM11]
gi|418400042|ref|ZP_12973586.1| (p)ppGpp synthetase I SpoT/RelA [Sinorhizobium meliloti CCNWSX0020]
gi|433612835|ref|YP_007189633.1| (p)ppGpp synthetase, RelA/SpoT family [Sinorhizobium meliloti GR4]
gi|11321260|gb|AAG34109.1|AF306550_1 (p)ppGpp synthetase [Sinorhizobium meliloti]
gi|15073997|emb|CAC45644.1| Putative GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Sinorhizobium meliloti 1021]
gi|47716787|gb|AAT37571.1| RelA [Sinorhizobium meliloti]
gi|51451369|gb|AAU03121.1| RelA [Sinorhizobium meliloti]
gi|333810953|gb|AEG03622.1| (p)ppGpp synthetase I, SpoT/RelA [Sinorhizobium meliloti BL225C]
gi|334094603|gb|AEG52614.1| (p)ppGpp synthetase I, SpoT/RelA [Sinorhizobium meliloti AK83]
gi|336032074|gb|AEH78006.1| putative GTP pyrophosphokinase (ATP:GTP 3'- pyrophosphotransferase)
protein [Sinorhizobium meliloti SM11]
gi|359505940|gb|EHK78458.1| (p)ppGpp synthetase I SpoT/RelA [Sinorhizobium meliloti CCNWSX0020]
gi|429551025|gb|AGA06034.1| (p)ppGpp synthetase, RelA/SpoT family [Sinorhizobium meliloti GR4]
Length = 741
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 15/141 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PD A++N KA +A KH Q+R G PYI HP+ VA ILT + + + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGQQKR--ASGDPYISHPLEVAAILTEMHLDESTIAV- 68
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T +EI+ FG + ++VE LT K + +K Q +L A
Sbjct: 69 -ALLHDTIEDTTATRQEIDDLFGEDIGALVEGLTKIKKLDLVTKKAKQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 128 DDVRVLLVKLADRLHNMRTLD 148
>gi|334346386|ref|YP_004554938.1| (p)ppGpp synthetase I SpoT/RelA [Sphingobium chlorophenolicum L-1]
gi|334103008|gb|AEG50432.1| (p)ppGpp synthetase I, SpoT/RelA [Sphingobium chlorophenolicum L-1]
Length = 701
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 77/138 (55%), Gaps = 11/138 (7%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ PDA ++ +A F+ KH Q+R G PY HP+ VA ILT + I++A
Sbjct: 14 YDPDADEAMINRAYVFSVQKHGSQKR--ASGDPYFSHPIEVAGILTDFN--LDDQTIVTA 69
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSS 191
LLHDT+EDT T+ EIE+ FG V +V+ +L+ + M+ +ER + L A
Sbjct: 70 LLHDTIEDTLVTYAEIEQAFGKDVAKMVDGVTKLSKIEAMSENERAAENLRKFLLAMSDD 129
Query: 192 HEAKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 130 IRVLLVKLADRLHNMRTL 147
>gi|407720009|ref|YP_006839671.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein
[Sinorhizobium meliloti Rm41]
gi|407318241|emb|CCM66845.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein
[Sinorhizobium meliloti Rm41]
Length = 741
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 78/141 (55%), Gaps = 15/141 (10%)
Query: 79 HSPD---AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
+ PD A++N KA +A KH Q+R G PYI HP+ VA ILT + + + +
Sbjct: 14 YKPDVNEALLN--KAYVYAMQKHGQQKR--ASGDPYISHPLEVAAILTEMHLDESTIAV- 68
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPH 189
ALLHDT+EDT T +EI+ FG + ++VE LT K + +K Q +L A
Sbjct: 69 -ALLHDTIEDTTATRQEIDDLFGEDIGALVEGLTKIKKLDLVTKKAKQAENLRKLLLAIS 127
Query: 190 SSHEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R ++
Sbjct: 128 DDVRVLLVKLADRLHNMRTLD 148
>gi|380302298|ref|ZP_09851991.1| (p)ppGpp synthetase, RelA/SpoT family protein [Brachybacterium
squillarum M-6-3]
Length = 809
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 74/136 (54%), Gaps = 9/136 (6%)
Query: 77 GMHSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVII 135
G SP + +V +A A H Q+RK G PYI HPV+VA IL LG S V+
Sbjct: 71 GSVSPKEDLGLVQRAYTVAERAHRGQQRK--SGDPYITHPVSVATILAELG--SPAEVVA 126
Query: 136 SALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSS 191
+ALLHDTVEDTD + +++ +FG + +V+ +T +T E + + + A
Sbjct: 127 AALLHDTVEDTDYSLDQLRADFGEVIAVMVDGVTKLDKVTYGEAAQAETVRKMIVAMSRD 186
Query: 192 HEAKLVKLADKLHNLR 207
L+KLAD+LHN R
Sbjct: 187 VRVLLIKLADRLHNAR 202
>gi|309811446|ref|ZP_07705232.1| GTP diphosphokinase [Dermacoccus sp. Ellin185]
gi|308434593|gb|EFP58439.1| GTP diphosphokinase [Dermacoccus sp. Ellin185]
Length = 784
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A + A H Q RK G PYI HP+AVA IL LG P + +ALLHDTVEDT
Sbjct: 50 IERAYEVAERCHRHQVRK--SGDPYITHPLAVATILAELGM--TPPTLAAALLHDTVEDT 105
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADK 202
D + E++ +FGP + +V+ +T +T + + + + A ++KLAD+
Sbjct: 106 DYSLEQLTDDFGPEIARLVDGVTKLDKVTYGDAAQAETVRKMVVAMAQDIRVLVIKLADR 165
Query: 203 LHNLR 207
LHN R
Sbjct: 166 LHNAR 170
>gi|261418406|ref|YP_003252088.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y412MC61]
gi|297529258|ref|YP_003670533.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. C56-T3]
gi|319767635|ref|YP_004133136.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y412MC52]
gi|448238857|ref|YP_007402915.1| GTP pyrophosphokinase [Geobacillus sp. GHH01]
gi|261374863|gb|ACX77606.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y412MC61]
gi|297252510|gb|ADI25956.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. C56-T3]
gi|317112501|gb|ADU94993.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y412MC52]
gi|445207699|gb|AGE23164.1| GTP pyrophosphokinase [Geobacillus sp. GHH01]
Length = 732
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +FA H H Q RK G PYI HP+ VA IL L + I + LHD +EDT+
Sbjct: 30 KAYEFAKHAHRDQFRKS--GEPYIIHPIQVAGILVDLK--MDATTIAAGFLHDVIEDTEA 85
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDERK---RCQILHAPHSSHEAKLVKLADK 202
T E++EREFG V +V+ +L K+ +++E++ ++ A L+KLAD+
Sbjct: 86 TKEDLEREFGAEVAMLVDGVTKLGKIKYKSQEEQQAENHRKMFLAMAQDIRVILIKLADR 145
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
LHN+R + + LP E++ + N ++ L R + I+ EL+ +Y P++
Sbjct: 146 LHNMRTL-KHLPA----EKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQ 199
>gi|316934148|ref|YP_004109130.1| (p)ppGpp synthetase I SpoT/RelA [Rhodopseudomonas palustris DX-1]
gi|315601862|gb|ADU44397.1| (p)ppGpp synthetase I, SpoT/RelA [Rhodopseudomonas palustris DX-1]
Length = 760
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q R G PY HP+ VA ILT+L K+ + I++ALLHDT+EDT+
Sbjct: 59 RAYVYAMMAHGEQTRAS--GDPYFSHPLEVAAILTNL-KLDD-ATIVAALLHDTIEDTEA 114
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EI+ FGP + ++VE LT K + R+ Q +L A L+KLAD+
Sbjct: 115 TRTEIDTMFGPEIGALVEGLTKLKRLELVSREAKQAENLRKLLLAIADDVRVLLIKLADR 174
Query: 203 LHNLRDIE 210
LHN+R ++
Sbjct: 175 LHNMRTLD 182
>gi|138896146|ref|YP_001126599.1| ppGpp synthetase/hydrolase Rel [Geobacillus thermodenitrificans
NG80-2]
gi|134267659|gb|ABO67854.1| ppGpp synthetase/hydrolase Rel [Geobacillus thermodenitrificans
NG80-2]
Length = 732
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 95/179 (53%), Gaps = 17/179 (9%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +FA H H Q RK G PYI HP+ VA IL L + I + LHD VEDT+
Sbjct: 30 KAYEFAKHAHRDQFRKS--GEPYIIHPIQVAGILADLK--MDATTIAAGFLHDVVEDTEA 85
Query: 149 TFEEIEREFGPRVRSVVE---ELTDNKHMTRDERK---RCQILHAPHSSHEAKLVKLADK 202
T E++EREFG V +V+ +L K+ +++E++ ++ A L+KLAD+
Sbjct: 86 TKEDLEREFGADVAMLVDGVTKLGKIKYKSQEEQQAENHRKMFLAMAQDIRVILIKLADR 145
Query: 203 LHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAKYCTPRE 259
LHN+R + + LP E++ + N ++ L R + I+ EL+ +Y P++
Sbjct: 146 LHNMRTL-KHLPA----EKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQ 199
>gi|418245307|ref|ZP_12871714.1| hypothetical protein KIQ_07372 [Corynebacterium glutamicum ATCC
14067]
gi|354510715|gb|EHE83637.1| hypothetical protein KIQ_07372 [Corynebacterium glutamicum ATCC
14067]
Length = 188
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 14/149 (9%)
Query: 95 SHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDTTFE--E 152
+H+HH ++ G PY+ H +V ++L + ++ V+I+ LLHDT+ED + +
Sbjct: 18 AHRHHVRK---GGGIPYVSHLYSVMYLLASV--TNDEDVLIAGLLHDTLEDVPEEYNSAQ 72
Query: 153 IEREFGPRVRSVVEELTDNKHMTRDERKRCQILH-APHSSHEAKLVKLADKLHNLRDIER 211
+E +FGPRVR +VEELT + R +LH + +S EA L+ ADKLHNL I
Sbjct: 73 LEADFGPRVRGLVEELTKQPLKSWKARADAYLLHLSAGASLEAVLISTADKLHNLMSILD 132
Query: 212 SLPVN----WT--EERKTQYFNWARDVVQ 234
L ++ W K Q W +V Q
Sbjct: 133 DLEIHGEDLWQRFNASKEQQIWWYSEVYQ 161
>gi|154253308|ref|YP_001414132.1| (p)ppGpp synthetase I SpoT/RelA [Parvibaculum lavamentivorans DS-1]
gi|154157258|gb|ABS64475.1| (p)ppGpp synthetase I, SpoT/RelA [Parvibaculum lavamentivorans
DS-1]
Length = 719
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 77/134 (57%), Gaps = 12/134 (8%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
+A++N +A +A +H Q+R G PY HP+ VA ILT L + I++ALLHD
Sbjct: 20 EALIN--RAYVYAMKQHGSQKR--ASGDPYFSHPIEVAGILTDLK--LDTATIVTALLHD 73
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTD--NKHMTRDERKRCQ----ILHAPHSSHEAK 195
T+EDT +T EE+ + FG +V +V+ +T +T + K+ + L A +
Sbjct: 74 TIEDTGSTMEELTKLFGAQVAGLVDGVTKLTRLELTSERSKQAENFRKFLLAMSNDIRVL 133
Query: 196 LVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 134 LVKLADRLHNMRTL 147
>gi|453077480|ref|ZP_21980226.1| GTP diphosphokinase [Rhodococcus triatomae BKS 15-14]
gi|452759155|gb|EME17528.1| GTP diphosphokinase [Rhodococcus triatomae BKS 15-14]
Length = 770
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 75/136 (55%), Gaps = 11/136 (8%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
+ + +A D A +H Q+RK G PYI HP+AVA IL LG + +I+ALLHDTV
Sbjct: 64 LATLQRAYDVAEERHADQKRKS--GDPYITHPLAVATILAELGM--DTTTLIAALLHDTV 119
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNK-----HMTRDERKRCQILHAPHSSHEAKLVK 198
EDT + E++ EFG V +V+ +T H E R I+ A ++K
Sbjct: 120 EDTGYSLEQLTDEFGEEVAHLVDGVTKLDKVVLGHAAEAETIRKMII-AMARDPRVLVIK 178
Query: 199 LADKLHNLRDIERSLP 214
+AD+LHN+R + R LP
Sbjct: 179 VADRLHNMRTM-RFLP 193
>gi|229918416|ref|YP_002887062.1| (p)ppGpp synthetase I SpoT/RelA [Exiguobacterium sp. AT1b]
gi|229469845|gb|ACQ71617.1| (p)ppGpp synthetase I, SpoT/RelA [Exiguobacterium sp. AT1b]
Length = 729
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 17/186 (9%)
Query: 82 DAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHD 141
D I + +A ++A H Q R+ G PYI HPV VA IL +G + II ALLHD
Sbjct: 23 DDIAEVKRAYEYAKLHHTGQFRRS--GEPYILHPVQVAGILVDIG--LDATTIIGALLHD 78
Query: 142 TVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKR------CQILHAPHSSHEAK 195
VEDTD + +++ +FGP V +V+ +T + +K +++ A
Sbjct: 79 VVEDTDISLQQLTDDFGPDVAMLVDGVTKLGKIKYKSKKEELAENHRKMIIAMAEDVRVI 138
Query: 196 LVKLADKLHNLRDIERSLPVNWTEERKTQYFNWARDVVQGL--RGTNAPIEAELDALFAK 253
L+KLAD+LHN+R ++ +P +E++ Q ++ L R + I+ EL+ + +
Sbjct: 139 LIKLADRLHNMRTLQH-MP----KEKQVQKAEETLEIFAPLAHRMGISTIKWELEDISLR 193
Query: 254 YCTPRE 259
Y P++
Sbjct: 194 YINPQQ 199
>gi|385652802|ref|ZP_10047355.1| GTP pyrophosphokinase [Leucobacter chromiiresistens JG 31]
Length = 731
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 12/150 (8%)
Query: 66 GEAPDTGD----SDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHI 121
G AP D + G H + I +A A H Q+R+ G PYI HP+AVA I
Sbjct: 8 GSAPGAVDQLIRTVRGNHPRADLTVIERAYAVAERAHRGQKRRS--GEPYITHPIAVAQI 65
Query: 122 LTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKR 181
L LG P VI +ALLHDTVEDT+ T +++ +EFG + +V+ +T + + +
Sbjct: 66 LADLGIA--PGVIAAALLHDTVEDTEYTLDQLTQEFGEEIAMLVDGVTKLDKVKYGDSAQ 123
Query: 182 CQILH----APHSSHEAKLVKLADKLHNLR 207
+ + A ++KLAD+LHN R
Sbjct: 124 AETVRKMVVAMAKDIRVLVIKLADRLHNAR 153
>gi|254293930|ref|YP_003059953.1| (p)ppGpp synthetase I SpoT/RelA [Hirschia baltica ATCC 49814]
gi|254042461|gb|ACT59256.1| (p)ppGpp synthetase I, SpoT/RelA [Hirschia baltica ATCC 49814]
Length = 759
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 72/139 (51%), Gaps = 11/139 (7%)
Query: 79 HSPDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISA 137
+ PDA + + +A FA +H Q R G PY HPV+VA ILT L + II+
Sbjct: 38 YQPDADEDALNRAYVFAMVRHGAQTRH--SGDPYYAHPVSVAGILTDLKL--DYSTIIAG 93
Query: 138 LLHDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSS 191
LLHDTVEDTD T EEIE F + +V+ +T + R Q + A
Sbjct: 94 LLHDTVEDTDVTLEEIEELFSKDIAEIVDGVTKLTQLESSSRAAKQAENFQKFILATTKD 153
Query: 192 HEAKLVKLADKLHNLRDIE 210
LVKLAD+LHN+R I+
Sbjct: 154 IRVLLVKLADRLHNMRTIQ 172
>gi|359398298|ref|ZP_09191320.1| GTP pyrophosphokinase [Novosphingobium pentaromativorans US6-1]
gi|357600305|gb|EHJ62002.1| GTP pyrophosphokinase [Novosphingobium pentaromativorans US6-1]
Length = 697
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 77/136 (56%), Gaps = 12/136 (8%)
Query: 80 SPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
+ +A++N +A + KH Q+R G PY HPV VA ++T L + II+ALL
Sbjct: 18 ADEALLN--RAYVYTVQKHGTQKR--ASGDPYFSHPVEVAGLMTELK--LDQQAIITALL 71
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVE---ELTDNKHMTRDER---KRCQILHAPHSSHE 193
HDTVEDT T EEIE+ FG + +V+ +L+ + MT +ER + L A
Sbjct: 72 HDTVEDTLATIEEIEKLFGTDIARLVDGVTKLSKIEVMTENERAAENLRKFLLAMSEDLR 131
Query: 194 AKLVKLADKLHNLRDI 209
LVKLAD+LHN+R +
Sbjct: 132 VLLVKLADRLHNMRTL 147
>gi|383450341|ref|YP_005357062.1| GTP diphosphokinase [Flavobacterium indicum GPTSA100-9]
gi|380501963|emb|CCG53005.1| GTP diphosphokinase [Flavobacterium indicum GPTSA100-9]
Length = 740
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 73/133 (54%), Gaps = 15/133 (11%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTH---LGKVSNPVVIISALLHDTV 143
I KA D A H QRRK G YI HP+AVA I+ LG + I +AL+HD V
Sbjct: 36 IRKAFDVAVDAHKEQRRK--SGEAYIFHPIAVAKIVARDIGLGSTA----IAAALMHDVV 89
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLV 197
EDT+ T ++IE+ F P++ +VE LT + +D+ Q +L H L+
Sbjct: 90 EDTEITVQDIEKMFNPKIAQIVEGLTKIPKVKQDQEISLQAENFRKMLLTLHDDVRVILI 149
Query: 198 KLADKLHNLRDIE 210
K+AD+LHN++ ++
Sbjct: 150 KIADRLHNMQTMD 162
>gi|150016418|ref|YP_001308672.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium beijerinckii NCIMB
8052]
gi|149902883|gb|ABR33716.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium beijerinckii NCIMB
8052]
Length = 738
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 14/145 (9%)
Query: 75 DSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVI 134
D ++ D M + KA DFA H Q+R+ G PYI HP+AVA IL LG +N I
Sbjct: 10 DKNCNNVDVEM-VKKAYDFAEKAHKDQKRE--SGEPYIIHPIAVAEILAELGMDTN--TI 64
Query: 135 ISALLHDTVEDTDTTFEEIEREFGPRVRSVVE------ELTDNKHMTRDERKRCQI---L 185
++ LLHD +EDT+ +++E F + ++VE +L + ++ T++E++ + L
Sbjct: 65 VAGLLHDVIEDTEFSYDETVSLFNAEIANLVEGVTKLTKLGEMEYKTKEEQQADNVRKML 124
Query: 186 HAPHSSHEAKLVKLADKLHNLRDIE 210
A ++KLAD+LHN+R ++
Sbjct: 125 LAMAKDIRVIIIKLADRLHNMRTLK 149
>gi|217977182|ref|YP_002361329.1| (p)ppGpp synthetase I SpoT/RelA [Methylocella silvestris BL2]
gi|217502558|gb|ACK49967.1| (p)ppGpp synthetase I, SpoT/RelA [Methylocella silvestris BL2]
Length = 736
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 10/127 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q+R G PY HP+ VA ILT + K+ + I++A+LHDT+EDTD+
Sbjct: 24 RAYVYAMKAHGSQKR--ASGDPYFSHPLEVAAILTDM-KLDD-ATIVAAVLHDTIEDTDS 79
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRC------QILHAPHSSHEAKLVKLADK 202
T EEI+R FG + +V+ LT K + +K ++L A LVKLAD+
Sbjct: 80 TREEIDRLFGQDIGRLVDGLTKLKKLDLVSKKAAHAENFRKLLLAIAQDVRVLLVKLADR 139
Query: 203 LHNLRDI 209
LHN+R +
Sbjct: 140 LHNMRTL 146
>gi|300023789|ref|YP_003756400.1| metal dependent phosphohydrolase [Hyphomicrobium denitrificans ATCC
51888]
gi|299525610|gb|ADJ24079.1| metal dependent phosphohydrolase [Hyphomicrobium denitrificans ATCC
51888]
Length = 178
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 68/124 (54%), Gaps = 4/124 (3%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHIL-THLGKVSNPVVIISALLHDTVED 145
+ A F++ KH Q RK + PY H V IL +H +++ PV+I +A LHDTVE
Sbjct: 5 VQNAQAFSARKHGHQTRKH-DSLPYTVHIEGVVEILRSH--EIAQPVIIAAAYLHDTVEK 61
Query: 146 TDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILHAPHSSHEAKLVKLADKLHN 205
TDT+ EI FG V +V LTD+ H TR RK + EAKL+KLAD + N
Sbjct: 62 TDTSIGEIIDCFGTDVARLVYWLTDDDHGTRKVRKLMSAWRLARAPWEAKLIKLADLIDN 121
Query: 206 LRDI 209
R I
Sbjct: 122 TRYI 125
>gi|431806039|ref|YP_007232940.1| GTP pyrophosphokinase (p)ppGpp synthetase II [Liberibacter crescens
BT-1]
gi|430800014|gb|AGA64685.1| GTP pyrophosphokinase (p)ppGpp synthetase II [Liberibacter crescens
BT-1]
Length = 728
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
KA +A KH Q+R G PYI HP+ VA IL + + +V+ ALLHD +EDT
Sbjct: 25 KAYVYAMQKHSQQKR--ASGDPYISHPIEVAAILADMRLDESTIVV--ALLHDILEDTTA 80
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHM------TRDERKRCQILHAPHSSHEAKLVKLADK 202
T EI+ FGP V +VE+LT K + T+ ++L A LVKLAD+
Sbjct: 81 TRAEIDELFGPEVGHLVEDLTKIKKIEIVSFKTKQAENLRKLLLAICDDVRVLLVKLADR 140
Query: 203 LHNLRDIE 210
LHN+R ++
Sbjct: 141 LHNMRTLD 148
>gi|84515158|ref|ZP_01002521.1| RelA/SpoT family protein [Loktanella vestfoldensis SKA53]
gi|84511317|gb|EAQ07771.1| RelA/SpoT family protein [Loktanella vestfoldensis SKA53]
Length = 710
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 23/156 (14%)
Query: 78 MHSPDAIMNIVKATD-------------FASHKHHFQRRKDPEGTPYIEHPVAVAHILTH 124
M + D+++++V+A + F + H Q R G PY HPVAVAHIL
Sbjct: 1 MTNADSLISLVRAYNPKTNQALLRDAFAFGADMHEGQFRH--SGEPYFTHPVAVAHILAL 58
Query: 125 LGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD--NKHMTRDERKRC 182
+ + +++ALLHDT+EDT +F +E FG + +V+ +T N +T + K+
Sbjct: 59 --QQMDDATLVTALLHDTIEDTKASFAVVETRFGREIAELVDGVTKLTNLQLTSTQTKQA 116
Query: 183 Q----ILHAPHSSHEAKLVKLADKLHNLRDIERSLP 214
+ + A LVKLAD+LHN+R I+ P
Sbjct: 117 ENFRKLFMATSRDLRVTLVKLADRLHNMRTIKSMRP 152
>gi|50365094|ref|YP_053519.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Mesoplasma florum L1]
gi|50363650|gb|AAT75635.1| guanosine-3',5'-bis(diphosphate)3'-pyrophosphohydrolase [Mesoplasma
florum L1]
Length = 765
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 11/138 (7%)
Query: 83 AIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDT 142
A++ I +A FA H Q+RK+ G PYI HP++ A+ L L P I + LLHD
Sbjct: 42 ALIKIKEAYLFAEKMHSEQKRKN--GDPYIYHPLSTAYYLAQLQ--MGPKTIKAGLLHDV 97
Query: 143 VEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERK--RCQILHAPHSSHEAK----L 196
VEDT EEIE +FG + S+VE +T + + R+ + + L + S +
Sbjct: 98 VEDTPVKIEEIEEKFGKEIASLVESVTKVSYFAEENREQIKSEYLRKLYISMAKDIRVII 157
Query: 197 VKLADKLHNLRDIERSLP 214
+K+AD+LHN+ IE +LP
Sbjct: 158 IKIADRLHNMLTIE-NLP 174
>gi|385676940|ref|ZP_10050868.1| GTP pyrophosphokinase [Amycolatopsis sp. ATCC 39116]
Length = 776
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 10/139 (7%)
Query: 81 PDAIMNIV-KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALL 139
P+A ++++ +A D A H QRRK G PYI HP+AVA IL LG + +++ALL
Sbjct: 67 PNADLSLLQRAYDVAEELHRHQRRK--SGDPYITHPLAVATILAELGM--DTTTLVAALL 122
Query: 140 HDTVEDTDTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAK 195
HDTVEDT + E++ +FG +V +V+ +T + + + A
Sbjct: 123 HDTVEDTGYSVEQLTADFGDKVAQLVDGVTKLDKVKLGTAAEAETIRKMVIAMARDPRVL 182
Query: 196 LVKLADKLHNLRDIERSLP 214
++KLAD+LHN+R + R LP
Sbjct: 183 VIKLADRLHNMRTM-RFLP 200
>gi|365824905|ref|ZP_09366865.1| hypothetical protein HMPREF0045_00501 [Actinomyces graevenitzii
C83]
gi|365259093|gb|EHM89088.1| hypothetical protein HMPREF0045_00501 [Actinomyces graevenitzii
C83]
Length = 782
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I++A + A H Q RK G PYI HP+AVA IL LG + P + +ALLHDTVEDT
Sbjct: 56 ILRAYEVARRCHEGQVRK--SGEPYITHPIAVATILAELGML--PKTLAAALLHDTVEDT 111
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ----ILHAPHSSHEAKLVKLADK 202
D T +++ +FG + +V+ +T + E + + ++ A +KLAD+
Sbjct: 112 DLTLDDLRAQFGDEIALLVDGVTKLDKLQYGEAAKSETVRKMIVAMSKDIRVLFIKLADR 171
Query: 203 LHNLR 207
LHN R
Sbjct: 172 LHNAR 176
>gi|408355692|ref|YP_006844223.1| hypothetical protein AXY_03290 [Amphibacillus xylanus NBRC 15112]
gi|407726463|dbj|BAM46461.1| hypothetical protein AXY_03290 [Amphibacillus xylanus NBRC 15112]
Length = 185
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 72/125 (57%), Gaps = 4/125 (3%)
Query: 86 NIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVED 145
+++A +A+ KH Q+RK PYI HP VA +L + ++I+ LLHD VED
Sbjct: 5 QLMRAISYAAVKHDGQKRK-VSKEPYIAHPYRVAMLLKEHD--CDQDLVIAGLLHDVVED 61
Query: 146 TDTTFEEIEREFGPRVRSVVEELTD-NKHMTRDERKRCQILHAPHSSHEAKLVKLADKLH 204
TD T EEI+ FG RV +V +T+ K + + RK+ I H+S +AKL+ ADK+
Sbjct: 62 TDGTIEEIDVLFGHRVAQIVHTVTEKTKTLAWELRKQQSIDQIRHASLDAKLIVCADKID 121
Query: 205 NLRDI 209
NL I
Sbjct: 122 NLDSI 126
>gi|220912781|ref|YP_002488090.1| (p)ppGpp synthetase I SpoT/RelA [Arthrobacter chlorophenolicus A6]
gi|219859659|gb|ACL40001.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrobacter chlorophenolicus A6]
Length = 763
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/125 (39%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 87 IVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDT 146
I +A D A H Q+RK G PYI HPVAVA IL LG + + +ALLHDTVEDT
Sbjct: 57 IQRAFDVAERSHRGQKRK--SGDPYITHPVAVATILAELGL--SGTTLAAALLHDTVEDT 112
Query: 147 DTTFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQILH----APHSSHEAKLVKLADK 202
T +++R+FG V +V+ +T ++ E + + + A ++KLAD+
Sbjct: 113 PYTLADLKRDFGAEVAMLVDGVTKLDKVSFGEAAQSETVRKMVVAMAKDIRVLMIKLADR 172
Query: 203 LHNLR 207
LHN R
Sbjct: 173 LHNAR 177
>gi|409386207|ref|ZP_11238654.1| GTP pyrophosphokinaseppGpp synthetase I [Lactococcus raffinolactis
4877]
gi|399206527|emb|CCK19569.1| GTP pyrophosphokinaseppGpp synthetase I [Lactococcus raffinolactis
4877]
Length = 736
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 16/140 (11%)
Query: 84 IMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTV 143
I+ + KA +A++ H Q R+ G PYI HP+ VA IL L + V + LHD V
Sbjct: 25 IILVKKALVYATNAHKEQYRQ--SGEPYIIHPIQVAGILAKLK--LDAVTVACGFLHDVV 80
Query: 144 EDTDTTFEEIEREFGPRVRSVVEELTD---------NKHMTRDERKRCQILHAPHSSHEA 194
EDT++T +++E EFGP VR + + +T + + + RK +L A
Sbjct: 81 EDTESTLDDLEAEFGPEVRIITDGVTKLGKVEYKSHEEQLAENHRK---MLMAMSKDMRV 137
Query: 195 KLVKLADKLHNLRDIERSLP 214
LVKLAD+LHN+R ++ P
Sbjct: 138 ILVKLADRLHNMRTLKHLRP 157
>gi|433449313|ref|ZP_20412177.1| GTP pyrophosphokinase [Weissella ceti NC36]
gi|429538827|gb|ELA06865.1| GTP pyrophosphokinase [Weissella ceti NC36]
Length = 741
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 62 EARLGEAPDTGDSDSGMHSPDAIMNIVKATDFASHKHHFQRRKDPEGTPYIEHPVAVAHI 121
E + A D ++ + + D + + KA FA + HH Q R+ G PYI HP+ VA I
Sbjct: 3 ETKTVTATDVHNTVAAYMNADHVAKVDKAYAFAENLHHDQMRQ--SGEPYIMHPIQVAGI 60
Query: 122 LTHLGKVSNPVVIISALLHDTVEDTDTTFEEIEREFGPRVRSVVEELTD-NKHMTRDERK 180
L L +P +++ LHD +EDTD T EE+ FG V +V+ ++ +K + R+
Sbjct: 61 LADLN--MDPDTVVAGYLHDVIEDTDATLEELTELFGANVAIIVDGVSKLSKIEYKSSRE 118
Query: 181 RC-----QILHAPHSSHEAKLVKLADKLHNLRDIERSLP 214
+ ++L A +VKLAD+LHN+R ++ P
Sbjct: 119 QLAENHRKLLLAMSKDIRVIIVKLADRLHNMRTLDALKP 157
>gi|414173893|ref|ZP_11428520.1| RelA/SpoT family protein [Afipia broomeae ATCC 49717]
gi|410890527|gb|EKS38326.1| RelA/SpoT family protein [Afipia broomeae ATCC 49717]
Length = 759
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 75/128 (58%), Gaps = 10/128 (7%)
Query: 89 KATDFASHKHHFQRRKDPEGTPYIEHPVAVAHILTHLGKVSNPVVIISALLHDTVEDTDT 148
+A +A H Q+R G PY HP+ VA ILT+L K+ + I++ALLHDT+EDT++
Sbjct: 62 RAYVYAMMAHGEQKR--ASGDPYFSHPLEVAAILTNL-KLDD-ATIVAALLHDTIEDTES 117
Query: 149 TFEEIEREFGPRVRSVVEELTDNKHMTRDERKRCQ------ILHAPHSSHEAKLVKLADK 202
T EI++ FG + ++V+ LT K + R+ Q +L A L+KLAD+
Sbjct: 118 TRAEIDQMFGSEIGALVDGLTKLKRLELVSREAKQAENLRKLLLAIADDVRVLLIKLADR 177
Query: 203 LHNLRDIE 210
LHN+R +E
Sbjct: 178 LHNMRTLE 185
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,324,890,291
Number of Sequences: 23463169
Number of extensions: 186572455
Number of successful extensions: 482141
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3337
Number of HSP's successfully gapped in prelim test: 1671
Number of HSP's that attempted gapping in prelim test: 469966
Number of HSP's gapped (non-prelim): 5301
length of query: 264
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 124
effective length of database: 9,074,351,707
effective search space: 1125219611668
effective search space used: 1125219611668
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 75 (33.5 bits)