BLAST Results

Query Summary

Your job contains 1 sequence.
Parameters: Threshold: 0.001; Maximum number of alignments shown: 100; BLAST filter: on
Query Sequence

>psy8735
MDDKEKVKSKLKQLSQQMTEAEAKQKKAELQAELEEKKSKLEKLSRNVNVISEGEVDKKT
ITDTKEKMVKEYNKRKRMCTEMLEAILENYPKSKKILLEEVGIETDEMVSMEKLQ
High Scoring Gene Products


Symbol, full name	Information	P value
BLAST match view associations BLAST with PSMC3IP PSMC3IP PSMC3IP Uncharacterized protein	protein from Canis lupus familiaris	4.5e-11
BLAST match view associations BLAST with PSMC3IP PSMC3IP PSMC3IP Homologous-pairing protein 2 homolog	protein from Homo sapiens	4.5e-11
BLAST match view associations BLAST with Psmc3ip Psmc3ip Psmc3ip proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein	protein from Mus musculus	4.5e-11
BLAST match view associations BLAST with Psmc3ip Psmc3ip Psmc3ip PSMC3 interacting protein	gene from Rattus norvegicus	4.5e-11
BLAST match view associations BLAST with LOC100521397 LOC100521397 LOC100521397 Uncharacterized protein	protein from Sus scrofa	1.2e-10
BLAST match view associations BLAST with PSMC3IP PSMC3IP PSMC3IP Uncharacterized protein	protein from Bos taurus	1.5e-10
BLAST match view associations BLAST with psmc3ip psmc3ip psmc3ip PSMC3 interacting protein	gene_product from Danio rerio	3.2e-10
BLAST match view associations BLAST with AHP2 AHP2 AHP2 AT1G13330	protein from Arabidopsis thaliana	1.7e-06
BLAST match view associations BLAST with hop2 hop2 hop2 homologous-pairing protein 2	gene from Dictyostelium discoideum	1.7e-05
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy8735
        (115 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|E2RCC0 - symbol:PSMC3IP "Uncharacterized protei...   153  4.5e-11   1
UNIPROTKB|Q9P2W1 - symbol:PSMC3IP "Homologous-pairing pro...   153  4.5e-11   1
MGI|MGI:1098610 - symbol:Psmc3ip "proteasome (prosome, ma...   153  4.5e-11   1
RGD|621885 - symbol:Psmc3ip "PSMC3 interacting protein" s...   153  4.5e-11   1
UNIPROTKB|E1C437 - symbol:E1C437 "Uncharacterized protein...   150  9.4e-11   1
UNIPROTKB|F1S1D9 - symbol:PSMC3IP "Uncharacterized protei...   149  1.2e-10   1
UNIPROTKB|E1BEL5 - symbol:PSMC3IP "Uncharacterized protei...   148  1.5e-10   1
ZFIN|ZDB-GENE-040625-125 - symbol:psmc3ip "PSMC3 interact...   145  3.2e-10   1
TAIR|locus:2205359 - symbol:AHP2 "AT1G13330" species:3702...   113  1.7e-06   1
DICTYBASE|DDB_G0280989 - symbol:hop2 "homologous-pairing ...   105  1.7e-05   1


>UNIPROTKB|E2RCC0 [details] [associations]
            symbol:PSMC3IP "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0030374 "ligand-dependent nuclear
            receptor transcription coactivator activity" evidence=IEA]
            GO:GO:0030374 OMA:QEQNRPY InterPro:IPR010776 PANTHER:PTHR15938
            Pfam:PF07106 CTD:29893 KO:K06695 GeneTree:ENSGT00390000006890
            EMBL:AAEX03006446 RefSeq:XP_003435274.1 Ensembl:ENSCAFT00000023696
            GeneID:607659 KEGG:cfa:607659 NextBio:20893368 Uniprot:E2RCC0
        Length = 217

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 30/51 (58%), Positives = 38/51 (74%)

Query:    57 DKKTITDTKEKMVKEYNKRKRMCTEMLEAILENYPKSKKILLEEVGIETDE 107
             +K+ +   ++K  KE+ KRKRM TE+ +AILE YPKSKK   EEVGIETDE
Sbjct:   158 EKEQVYRERQKYCKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208


>UNIPROTKB|Q9P2W1 [details] [associations]
            symbol:PSMC3IP "Homologous-pairing protein 2 homolog"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0007126 "meiosis"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0030374 "ligand-dependent nuclear receptor
            transcription coactivator activity" evidence=IMP] GO:GO:0005634
            GO:GO:0007126 GO:GO:0003677 GO:GO:0045944 GO:GO:0006310
            GO:GO:0030374 Orphanet:243 eggNOG:NOG274440 HOGENOM:HOG000005789
            OMA:QEQNRPY InterPro:IPR010776 PANTHER:PTHR15938 Pfam:PF07106
            EMBL:L38933 EMBL:AB030304 EMBL:AF440240 EMBL:BC008792
            IPI:IPI00009805 IPI:IPI00335760 PIR:I68521 RefSeq:NP_001242943.1
            RefSeq:NP_001242944.1 RefSeq:NP_001242945.1 RefSeq:NP_037422.2
            RefSeq:NP_057640.1 UniGene:Hs.383019 ProteinModelPortal:Q9P2W1
            STRING:Q9P2W1 PhosphoSite:Q9P2W1 DMDM:74719969 PaxDb:Q9P2W1
            PRIDE:Q9P2W1 Ensembl:ENST00000253789 Ensembl:ENST00000393795
            GeneID:29893 KEGG:hsa:29893 UCSC:uc002iai.2 UCSC:uc002iak.2
            CTD:29893 GeneCards:GC17M040725 HGNC:HGNC:17928 HPA:HPA044439
            MIM:608665 MIM:614324 neXtProt:NX_Q9P2W1 PharmGKB:PA143485584
            HOVERGEN:HBG105257 InParanoid:Q9P2W1 KO:K06695 GenomeRNAi:29893
            NextBio:52446 ArrayExpress:Q9P2W1 Bgee:Q9P2W1 CleanEx:HS_PSMC3IP
            Genevestigator:Q9P2W1 Uniprot:Q9P2W1
        Length = 217

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 30/51 (58%), Positives = 38/51 (74%)

Query:    57 DKKTITDTKEKMVKEYNKRKRMCTEMLEAILENYPKSKKILLEEVGIETDE 107
             +K+ +   ++K  KE+ KRKRM TE+ +AILE YPKSKK   EEVGIETDE
Sbjct:   158 EKEQVYRERQKYCKEWRKRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208


>MGI|MGI:1098610 [details] [associations]
            symbol:Psmc3ip "proteasome (prosome, macropain) 26S subunit,
            ATPase 3, interacting protein" species:10090 "Mus musculus"
            [GO:0000502 "proteasome complex" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0007126 "meiosis"
            evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=ISO]
            [GO:0030374 "ligand-dependent nuclear receptor transcription
            coactivator activity" evidence=ISO] [GO:0035259 "glucocorticoid
            receptor binding" evidence=ISO] [GO:0042803 "protein
            homodimerization activity" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0046966 "thyroid hormone receptor binding"
            evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
            [GO:0050692 "DBD domain binding" evidence=ISO] MGI:MGI:1098610
            GO:GO:0005634 GO:GO:0007126 GO:GO:0003677 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310 GO:GO:0030374
            EMBL:BX255926 eggNOG:NOG274440 HOGENOM:HOG000005789 OMA:QEQNRPY
            InterPro:IPR010776 PANTHER:PTHR15938 Pfam:PF07106 CTD:29893
            HOVERGEN:HBG105257 KO:K06695 EMBL:AB000121 EMBL:AK133462
            EMBL:BC030169 IPI:IPI00126349 PIR:JC5710 RefSeq:NP_032975.1
            UniGene:Mm.18344 ProteinModelPortal:O35047 STRING:O35047
            PhosphoSite:O35047 PaxDb:O35047 PRIDE:O35047
            Ensembl:ENSMUST00000019447 GeneID:19183 KEGG:mmu:19183
            GeneTree:ENSGT00390000006890 InParanoid:O35047 OrthoDB:EOG4DFPPN
            ChiTaRS:PSMC3IP NextBio:295878 Bgee:O35047 Genevestigator:O35047
            Uniprot:O35047
        Length = 217

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 30/51 (58%), Positives = 38/51 (74%)

Query:    57 DKKTITDTKEKMVKEYNKRKRMCTEMLEAILENYPKSKKILLEEVGIETDE 107
             +K+ +   ++K  KE+ KRKRM TE+ +AILE YPKSKK   EEVGIETDE
Sbjct:   158 EKEKVYRDRQKYCKEWRKRKRMTTELCDAILEGYPKSKKQFFEEVGIETDE 208


>RGD|621885 [details] [associations]
            symbol:Psmc3ip "PSMC3 interacting protein" species:10116 "Rattus
            norvegicus" [GO:0000502 "proteasome complex" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0007126 "meiosis" evidence=IEA] [GO:0030331 "estrogen receptor
            binding" evidence=IDA] [GO:0030374 "ligand-dependent nuclear
            receptor transcription coactivator activity" evidence=IEA;ISO;IDA]
            [GO:0035259 "glucocorticoid receptor binding" evidence=IDA]
            [GO:0042803 "protein homodimerization activity" evidence=IMP]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0046966 "thyroid hormone
            receptor binding" evidence=IDA] [GO:0046983 "protein dimerization
            activity" evidence=TAS] [GO:0050681 "androgen receptor binding"
            evidence=IDA] [GO:0050692 "DBD domain binding" evidence=IDA]
            RGD:621885 GO:GO:0005634 GO:GO:0007126 GO:GO:0035259 GO:GO:0042803
            GO:GO:0003677 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006310 GO:GO:0050681 GO:GO:0030331 GO:GO:0046966
            GO:GO:0030374 eggNOG:NOG274440 HOGENOM:HOG000005789
            InterPro:IPR010776 PANTHER:PTHR15938 Pfam:PF07106 CTD:29893
            HOVERGEN:HBG105257 KO:K06695 OrthoDB:EOG4DFPPN EMBL:AF352812
            IPI:IPI00210402 RefSeq:NP_604453.2 UniGene:Rn.144650 STRING:Q91ZY6
            PhosphoSite:Q91ZY6 PRIDE:Q91ZY6 GeneID:140938 KEGG:rno:140938
            UCSC:RGD:621885 InParanoid:Q91ZY6 NextBio:620826
            Genevestigator:Q91ZY6 GO:GO:0050692 Uniprot:Q91ZY6
        Length = 217

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 30/51 (58%), Positives = 38/51 (74%)

Query:    57 DKKTITDTKEKMVKEYNKRKRMCTEMLEAILENYPKSKKILLEEVGIETDE 107
             +K+ +   ++K  KE+ KRKRM TE+ +AILE YPKSKK   EEVGIETDE
Sbjct:   158 EKEKVYRERQKYCKEWRKRKRMTTELCDAILEGYPKSKKQFFEEVGIETDE 208


>UNIPROTKB|E1C437 [details] [associations]
            symbol:E1C437 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0030374 "ligand-dependent nuclear receptor
            transcription coactivator activity" evidence=IEA] GO:GO:0030374
            InterPro:IPR010776 PANTHER:PTHR15938 Pfam:PF07106
            GeneTree:ENSGT00390000006890 EMBL:AADN02068684 EMBL:AADN02068685
            IPI:IPI00684789 Ensembl:ENSGALT00000031350 Uniprot:E1C437
        Length = 204

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 29/51 (56%), Positives = 38/51 (74%)

Query:    57 DKKTITDTKEKMVKEYNKRKRMCTEMLEAILENYPKSKKILLEEVGIETDE 107
             +K+ +   ++   KE+ +RKRM TE+L+AILE YPKSKK   EEVGIETDE
Sbjct:   144 EKEKVCSEQKLYCKEWRRRKRMATELLDAILEGYPKSKKQFFEEVGIETDE 194


>UNIPROTKB|F1S1D9 [details] [associations]
            symbol:PSMC3IP "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0030374 "ligand-dependent nuclear receptor
            transcription coactivator activity" evidence=IEA] GO:GO:0030374
            OMA:QEQNRPY InterPro:IPR010776 PANTHER:PTHR15938 Pfam:PF07106
            KO:K06695 GeneTree:ENSGT00390000006890 EMBL:FP016109
            RefSeq:XP_003131445.2 Ensembl:ENSSSCT00000018936 GeneID:100521397
            KEGG:ssc:100521397 Uniprot:F1S1D9
        Length = 217

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 28/51 (54%), Positives = 38/51 (74%)

Query:    57 DKKTITDTKEKMVKEYNKRKRMCTEMLEAILENYPKSKKILLEEVGIETDE 107
             +K+ +   +++  KE+ KRKRM TE+ +AILE YP+SKK   EEVGIETDE
Sbjct:   158 EKEQVHRERQRYCKEWRKRKRMATELFDAILEGYPRSKKQFFEEVGIETDE 208


>UNIPROTKB|E1BEL5 [details] [associations]
            symbol:PSMC3IP "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0030374 "ligand-dependent nuclear receptor
            transcription coactivator activity" evidence=IEA] GO:GO:0030374
            OMA:QEQNRPY InterPro:IPR010776 PANTHER:PTHR15938 Pfam:PF07106
            CTD:29893 KO:K06695 GeneTree:ENSGT00390000006890 EMBL:DAAA02049190
            IPI:IPI01002489 RefSeq:NP_001231123.1 UniGene:Bt.30711
            UniGene:Bt.76366 Ensembl:ENSBTAT00000027851 GeneID:508530
            KEGG:bta:508530 NextBio:20868559 Uniprot:E1BEL5
        Length = 217

 Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 29/51 (56%), Positives = 38/51 (74%)

Query:    57 DKKTITDTKEKMVKEYNKRKRMCTEMLEAILENYPKSKKILLEEVGIETDE 107
             +K+ +   ++K  KE+ +RKRM TE+ +AILE YPKSKK   EEVGIETDE
Sbjct:   158 EKEQVYKERQKYHKEWRQRKRMATELSDAILEGYPKSKKQFFEEVGIETDE 208


>ZFIN|ZDB-GENE-040625-125 [details] [associations]
            symbol:psmc3ip "PSMC3 interacting protein"
            species:7955 "Danio rerio" [GO:0008150 "biological_process"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0003674 "molecular_function" evidence=ND]
            ZFIN:ZDB-GENE-040625-125 eggNOG:NOG274440 HOGENOM:HOG000005789
            InterPro:IPR010776 PANTHER:PTHR15938 Pfam:PF07106 CTD:29893
            HOVERGEN:HBG105257 KO:K06695 OrthoDB:EOG4DFPPN EMBL:BC071453
            IPI:IPI00500514 RefSeq:NP_001002124.1 UniGene:Dr.114432
            STRING:Q6IQF3 GeneID:415214 KEGG:dre:415214 InParanoid:Q6IQF3
            NextBio:20818882 ArrayExpress:Q6IQF3 Uniprot:Q6IQF3
        Length = 213

 Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 28/51 (54%), Positives = 38/51 (74%)

Query:    57 DKKTITDTKEKMVKEYNKRKRMCTEMLEAILENYPKSKKILLEEVGIETDE 107
             +++ +   +E  VKE+ KRKR+ ++M+ AILE YPKSKK  LEE GIETDE
Sbjct:   154 EREKVYKERETYVKEWRKRKRLVSDMMGAILEGYPKSKKHFLEEAGIETDE 204


>TAIR|locus:2205359 [details] [associations]
            symbol:AHP2 "AT1G13330" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0051026 "chiasma assembly"
            evidence=IMP] [GO:0006261 "DNA-dependent DNA replication"
            evidence=RCA] [GO:0006302 "double-strand break repair"
            evidence=RCA] [GO:0010332 "response to gamma radiation"
            evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
            EMBL:AC011810 GO:GO:0006310 GO:GO:0051026 EMBL:AY225519
            EMBL:AJ627484 EMBL:AK176610 EMBL:AK227903 EMBL:BT025172
            IPI:IPI00542471 PIR:A86268 RefSeq:NP_172791.1 UniGene:At.42036
            IntAct:Q9FX64 STRING:Q9FX64 PaxDb:Q9FX64 PRIDE:Q9FX64
            EnsemblPlants:AT1G13330.1 GeneID:837893 KEGG:ath:AT1G13330
            TAIR:At1g13330 eggNOG:NOG274440 HOGENOM:HOG000005789
            InParanoid:Q9FX64 OMA:QEQNRPY PhylomeDB:Q9FX64
            ProtClustDB:CLSN2682524 Genevestigator:Q9FX64 InterPro:IPR010776
            PANTHER:PTHR15938 Pfam:PF07106 Uniprot:Q9FX64
        Length = 226

 Score = 113 (44.8 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 23/55 (41%), Positives = 33/55 (60%)

Query:    57 DKKTITDTKEKMVKEYNKRKRMCTEMLEAILENYPKSKKILLEEVGIETDEMVSM 111
             DKK + D     + ++ KRKRM  ++ + + EN PK  K L EE+GIE DE V +
Sbjct:   153 DKKAVEDMYADKINQWRKRKRMFRDIWDTVTENSPKDVKELKEELGIEYDEDVGL 207


>DICTYBASE|DDB_G0280989 [details] [associations]
            symbol:hop2 "homologous-pairing protein 2"
            species:44689 "Dictyostelium discoideum" [GO:0007126 "meiosis"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
            dictyBase:DDB_G0280989 GO:GO:0005634 GO:GO:0007126
            GenomeReviews:CM000152_GR GO:GO:0003677 EMBL:AAFI02000040
            GO:GO:0006310 eggNOG:NOG274440 InterPro:IPR010776 PANTHER:PTHR15938
            Pfam:PF07106 RefSeq:XP_640755.1 PRIDE:Q54UM1
            EnsemblProtists:DDB0302478 GeneID:8622808 KEGG:ddi:DDB_G0280989
            OMA:NRPLNAT Uniprot:Q54UM1
        Length = 243

 Score = 105 (42.0 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 22/58 (37%), Positives = 37/58 (63%)

Query:    57 DKKTITDTKEKMVKEYNKRKRMCTEMLEAILENYPKSKKILLEEVGIETDEMVSMEKL 114
             DK+ + DT +K   E+ KRK +  ++L+ +LE   K KK L E++G ETDE + ++ +
Sbjct:   160 DKQRLDDTIKKARSEWVKRKALFRDILDQVLERSNKKKKDLQEDIGWETDEDLKIQMI 217


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.308   0.126   0.320    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      115        79   0.00091  102 3  10 23  0.47    29
                                                     29  0.39    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  10
  No. of states in DFA:  505 (54 KB)
  Total size of DFA:  109 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  17.20u 0.10s 17.30t   Elapsed:  00:00:07
  Total cpu time:  17.20u 0.10s 17.30t   Elapsed:  00:00:09
  Start:  Thu Aug 15 12:29:30 2013   End:  Thu Aug 15 12:29:39 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data
