BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8741
(62 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24498|RY44_DROME Ryanodine receptor 44F OS=Drosophila melanogaster GN=Rya-r44F PE=1
SV=3
Length = 5127
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 54/62 (87%)
Query: 1 MVDTLVESAANVELILKYFDMFLKLKDLTSSASFMEIDINNEGWVYPKDFKEKMEQQKSY 60
MVDTLVESA+NVELILKYFDMFLKL DL S SF E+D+ NEGWV PKDF+EKMEQ K+Y
Sbjct: 4174 MVDTLVESASNVELILKYFDMFLKLADLIESPSFHEVDMKNEGWVTPKDFREKMEQSKNY 4233
Query: 61 TP 62
TP
Sbjct: 4234 TP 4235
>sp|Q9TS33|RYR3_RABIT Ryanodine receptor 3 OS=Oryctolagus cuniculus PE=1 SV=1
Length = 4872
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 49/61 (80%)
Query: 1 MVDTLVESAANVELILKYFDMFLKLKDLTSSASFMEIDINNEGWVYPKDFKEKMEQQKSY 60
MVDTLVES+ NVE+ILK+FDMFLKLKDLTSS +F E D + +G + K+F++ ME QK Y
Sbjct: 3897 MVDTLVESSTNVEMILKFFDMFLKLKDLTSSDTFKEYDPDGKGIISKKEFQKAMEGQKQY 3956
Query: 61 T 61
T
Sbjct: 3957 T 3957
>sp|Q15413|RYR3_HUMAN Ryanodine receptor 3 OS=Homo sapiens GN=RYR3 PE=1 SV=3
Length = 4870
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/61 (63%), Positives = 49/61 (80%)
Query: 1 MVDTLVESAANVELILKYFDMFLKLKDLTSSASFMEIDINNEGWVYPKDFKEKMEQQKSY 60
MVDTLVES+ NVE+ILK+FDMFLKLKDLTSS +F E D + +G + K+F++ ME QK Y
Sbjct: 3895 MVDTLVESSTNVEMILKFFDMFLKLKDLTSSDTFKEYDPDGKGIISKKEFQKAMEGQKQY 3954
Query: 61 T 61
T
Sbjct: 3955 T 3955
>sp|A2AGL3|RYR3_MOUSE Ryanodine receptor 3 OS=Mus musculus GN=Ryr3 PE=1 SV=1
Length = 4863
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 48/61 (78%)
Query: 1 MVDTLVESAANVELILKYFDMFLKLKDLTSSASFMEIDINNEGWVYPKDFKEKMEQQKSY 60
MVDTLVES+ NVE+ILK+FDMFLKLKDLTSS +F E D + +G + K+F++ ME K Y
Sbjct: 3888 MVDTLVESSTNVEMILKFFDMFLKLKDLTSSDTFKEYDPDGKGIISRKEFQKAMEGLKQY 3947
Query: 61 T 61
T
Sbjct: 3948 T 3948
>sp|B0LPN4|RYR2_RAT Ryanodine receptor 2 OS=Rattus norvegicus GN=Ryr2 PE=1 SV=2
Length = 4953
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 46/61 (75%)
Query: 1 MVDTLVESAANVELILKYFDMFLKLKDLTSSASFMEIDINNEGWVYPKDFKEKMEQQKSY 60
MVD LVES+ NVE+ILK+FDMFLKLKDLTSS +F E D + +G + +DF + ME K Y
Sbjct: 3985 MVDMLVESSNNVEMILKFFDMFLKLKDLTSSDTFKEYDPDGKGVISKRDFHKAMESHKHY 4044
Query: 61 T 61
T
Sbjct: 4045 T 4045
>sp|P30957|RYR2_RABIT Ryanodine receptor 2 OS=Oryctolagus cuniculus GN=RYR2 PE=1 SV=3
Length = 4969
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 46/61 (75%)
Query: 1 MVDTLVESAANVELILKYFDMFLKLKDLTSSASFMEIDINNEGWVYPKDFKEKMEQQKSY 60
MVD LVES+ NVE+ILK+FDMFLKLKDLTSS +F E D + +G + +DF + ME K Y
Sbjct: 4000 MVDMLVESSNNVEMILKFFDMFLKLKDLTSSDTFKEYDPDGKGIISKRDFHKAMESHKHY 4059
Query: 61 T 61
T
Sbjct: 4060 T 4060
>sp|Q92736|RYR2_HUMAN Ryanodine receptor 2 OS=Homo sapiens GN=RYR2 PE=1 SV=3
Length = 4967
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 46/61 (75%)
Query: 1 MVDTLVESAANVELILKYFDMFLKLKDLTSSASFMEIDINNEGWVYPKDFKEKMEQQKSY 60
MVD LVES+ NVE+ILK+FDMFLKLKDLTSS +F E D + +G + +DF + ME K Y
Sbjct: 3999 MVDMLVESSNNVEMILKFFDMFLKLKDLTSSDTFKEYDPDGKGVISKRDFHKAMESHKHY 4058
Query: 61 T 61
T
Sbjct: 4059 T 4059
>sp|E9Q401|RYR2_MOUSE Ryanodine receptor 2 OS=Mus musculus GN=Ryr2 PE=1 SV=1
Length = 4966
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 46/61 (75%)
Query: 1 MVDTLVESAANVELILKYFDMFLKLKDLTSSASFMEIDINNEGWVYPKDFKEKMEQQKSY 60
MVD LVES+ NVE+ILK+FDMFLKLKDLTSS +F E D + +G + +DF + ME K Y
Sbjct: 3998 MVDMLVESSNNVEMILKFFDMFLKLKDLTSSDTFKEYDPDGKGVISKRDFHKAMESHKHY 4057
Query: 61 T 61
T
Sbjct: 4058 T 4058
>sp|F1LMY4|RYR1_RAT Ryanodine receptor 1 OS=Rattus norvegicus GN=Ryr1 PE=2 SV=1
Length = 5035
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 45/61 (73%)
Query: 1 MVDTLVESAANVELILKYFDMFLKLKDLTSSASFMEIDINNEGWVYPKDFKEKMEQQKSY 60
MVD LVES++NVE+ILK+FDMFLKLKD+ S +F + + G + KDF++ M+ QK +
Sbjct: 4047 MVDMLVESSSNVEMILKFFDMFLKLKDIVGSEAFQDYVTDPRGLISKKDFQKAMDSQKQF 4106
Query: 61 T 61
T
Sbjct: 4107 T 4107
>sp|P16960|RYR1_PIG Ryanodine receptor 1 OS=Sus scrofa GN=RYR1 PE=2 SV=2
Length = 5035
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 45/61 (73%)
Query: 1 MVDTLVESAANVELILKYFDMFLKLKDLTSSASFMEIDINNEGWVYPKDFKEKMEQQKSY 60
MVD LVES++NVE+ILK+FDMFLKLKD+ S +F + + G + KDF++ M+ QK +
Sbjct: 4039 MVDMLVESSSNVEMILKFFDMFLKLKDIVGSEAFQDYVTDPRGLISKKDFQKAMDSQKQF 4098
Query: 61 T 61
T
Sbjct: 4099 T 4099
>sp|E9PZQ0|RYR1_MOUSE Ryanodine receptor 1 OS=Mus musculus GN=Ryr1 PE=1 SV=1
Length = 5035
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 45/61 (73%)
Query: 1 MVDTLVESAANVELILKYFDMFLKLKDLTSSASFMEIDINNEGWVYPKDFKEKMEQQKSY 60
MVD LVES++NVE+ILK+FDMFLKLKD+ S +F + + G + KDF++ M+ QK +
Sbjct: 4047 MVDMLVESSSNVEMILKFFDMFLKLKDIVGSEAFQDYVTDPRGLISKKDFQKAMDSQKQF 4106
Query: 61 T 61
T
Sbjct: 4107 T 4107
>sp|P11716|RYR1_RABIT Ryanodine receptor 1 OS=Oryctolagus cuniculus GN=RYR1 PE=1 SV=1
Length = 5037
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 45/61 (73%)
Query: 1 MVDTLVESAANVELILKYFDMFLKLKDLTSSASFMEIDINNEGWVYPKDFKEKMEQQKSY 60
MVD LVES++NVE+ILK+FDMFLKLKD+ S +F + + G + KDF++ M+ QK +
Sbjct: 4044 MVDMLVESSSNVEMILKFFDMFLKLKDIVGSEAFQDYVTDPRGLISKKDFQKAMDSQKQF 4103
Query: 61 T 61
T
Sbjct: 4104 T 4104
>sp|P21817|RYR1_HUMAN Ryanodine receptor 1 OS=Homo sapiens GN=RYR1 PE=1 SV=3
Length = 5038
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 45/61 (73%)
Query: 1 MVDTLVESAANVELILKYFDMFLKLKDLTSSASFMEIDINNEGWVYPKDFKEKMEQQKSY 60
MVD LVES++NVE+ILK+FDMFLKLKD+ S +F + + G + KDF++ M+ QK +
Sbjct: 4043 MVDMLVESSSNVEMILKFFDMFLKLKDIVGSEAFQDYVTDPRGLISKKDFQKAMDSQKQF 4102
Query: 61 T 61
+
Sbjct: 4103 S 4103
>sp|Q5SZK8|FREM2_HUMAN FRAS1-related extracellular matrix protein 2 OS=Homo sapiens GN=FREM2
PE=1 SV=2
Length = 3169
Score = 29.3 bits (64), Expect = 7.9, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 17 KYFDMFLKLKDLTSSASFMEIDINNEGWVYPKDFKEKMEQQKSYTP 62
K+ D+ LK + SF+ I + KDFK K ++Q + P
Sbjct: 1785 KFLDVVLKRRGYLGETSFISIGTRDRTAEKDKDFKGKAQKQVQFNP 1830
>sp|P46570|SRG1_CAEEL Serpentine receptor class gamma-1 OS=Caenorhabditis elegans
GN=srg-1 PE=3 SV=2
Length = 288
Score = 28.9 bits (63), Expect = 9.6, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 11 NVELILKYFDMFLKLKDLTSSASFMEIDINNEGWVYPKDFKEKMEQQKSYT 61
N E +++ +FL+L LT SA F+ I W Y K F+ +Q+ YT
Sbjct: 15 NFEPLIENLKLFLQLCYLTPSALFLSRVIYITAWKYRKKFR----KQRFYT 61
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,467,818
Number of Sequences: 539616
Number of extensions: 595976
Number of successful extensions: 1496
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1482
Number of HSP's gapped (non-prelim): 16
length of query: 62
length of database: 191,569,459
effective HSP length: 34
effective length of query: 28
effective length of database: 173,222,515
effective search space: 4850230420
effective search space used: 4850230420
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)