RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy8741
         (62 letters)



>d1tuha_ d.17.4.11 (A:) Hypothetical protein egc068 from a
          soil-derived mobile gene cassette {uncultured organism
          [TaxId: 155900]}
          Length = 131

 Score = 21.8 bits (45), Expect = 8.3
 Identities = 5/33 (15%), Positives = 13/33 (39%), Gaps = 1/33 (3%)

Query: 7  ESAANVELILKYFDMFLKLKDLTSSASFMEIDI 39
          E+  N E + + +  F    D+ +     + + 
Sbjct: 2  EAEQNAETVRRGYAAFNS-GDMKTLTELFDENA 33


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.131    0.368 

Gapped
Lambda     K      H
   0.267   0.0448    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 219,414
Number of extensions: 7472
Number of successful extensions: 60
Number of sequences better than 10.0: 1
Number of HSP's gapped: 60
Number of HSP's successfully gapped: 24
Length of query: 62
Length of database: 2,407,596
Length adjustment: 32
Effective length of query: 30
Effective length of database: 1,968,236
Effective search space: 59047080
Effective search space used: 59047080
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.6 bits)