BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8744
(116 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1QQW|A Chain A, Crystal Structure Of Human Erythrocyte Catalase
pdb|1QQW|B Chain B, Crystal Structure Of Human Erythrocyte Catalase
pdb|1QQW|C Chain C, Crystal Structure Of Human Erythrocyte Catalase
pdb|1QQW|D Chain D, Crystal Structure Of Human Erythrocyte Catalase
pdb|1F4J|A Chain A, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
pdb|1F4J|B Chain B, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
pdb|1F4J|C Chain C, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
pdb|1F4J|D Chain D, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
Length = 527
Score = 94.0 bits (232), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 53/65 (81%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
++T+Q IKNL V+ A L+ DPDY IRDL+N+IA GKYPS+TFYIQVMTF QAE + +N
Sbjct: 236 YKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFN 295
Query: 112 PFDLT 116
PFDLT
Sbjct: 296 PFDLT 300
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 42/52 (80%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLF 52
AFGYFEVTHDIT+Y+KA VF IGK+T I VRFSTV GESGSADT R R F
Sbjct: 81 AFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGF 132
>pdb|1DGG|A Chain A, Human Erythrocyte Catalse Cyanide Complex
pdb|1DGG|B Chain B, Human Erythrocyte Catalse Cyanide Complex
pdb|1DGG|C Chain C, Human Erythrocyte Catalse Cyanide Complex
pdb|1DGG|D Chain D, Human Erythrocyte Catalse Cyanide Complex
pdb|1DGF|A Chain A, Human Erythrocyte Catalase
pdb|1DGF|B Chain B, Human Erythrocyte Catalase
pdb|1DGF|C Chain C, Human Erythrocyte Catalase
pdb|1DGF|D Chain D, Human Erythrocyte Catalase
Length = 497
Score = 94.0 bits (232), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 53/65 (81%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
++T+Q IKNL V+ A L+ DPDY IRDL+N+IA GKYPS+TFYIQVMTF QAE + +N
Sbjct: 232 YKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFN 291
Query: 112 PFDLT 116
PFDLT
Sbjct: 292 PFDLT 296
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 42/52 (80%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLF 52
AFGYFEVTHDIT+Y+KA VF IGK+T I VRFSTV GESGSADT R R F
Sbjct: 77 AFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGF 128
>pdb|1DGH|B Chain B, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
pdb|1DGH|D Chain D, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
Length = 498
Score = 94.0 bits (232), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 53/65 (81%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
++T+Q IKNL V+ A L+ DPDY IRDL+N+IA GKYPS+TFYIQVMTF QAE + +N
Sbjct: 233 YKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFN 292
Query: 112 PFDLT 116
PFDLT
Sbjct: 293 PFDLT 297
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 42/52 (80%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLF 52
AFGYFEVTHDIT+Y+KA VF IGK+T I VRFSTV GESGSADT R R F
Sbjct: 78 AFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGF 129
>pdb|1DGH|A Chain A, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
pdb|1DGH|C Chain C, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
pdb|1DGB|A Chain A, Human Erythrocyte Catalase
pdb|1DGB|B Chain B, Human Erythrocyte Catalase
pdb|1DGB|C Chain C, Human Erythrocyte Catalase
pdb|1DGB|D Chain D, Human Erythrocyte Catalase
Length = 498
Score = 94.0 bits (232), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 53/65 (81%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
++T+Q IKNL V+ A L+ DPDY IRDL+N+IA GKYPS+TFYIQVMTF QAE + +N
Sbjct: 233 YKTDQGIKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFN 292
Query: 112 PFDLT 116
PFDLT
Sbjct: 293 PFDLT 297
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 42/52 (80%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLF 52
AFGYFEVTHDIT+Y+KA VF IGK+T I VRFSTV GESGSADT R R F
Sbjct: 78 AFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGF 129
>pdb|3NWL|A Chain A, The Crystal Structure Of The P212121 Form Of Bovine Liver
Catalase Previously Characterized By Electron Microscopy
pdb|3NWL|B Chain B, The Crystal Structure Of The P212121 Form Of Bovine Liver
Catalase Previously Characterized By Electron Microscopy
pdb|3NWL|C Chain C, The Crystal Structure Of The P212121 Form Of Bovine Liver
Catalase Previously Characterized By Electron Microscopy
pdb|3NWL|D Chain D, The Crystal Structure Of The P212121 Form Of Bovine Liver
Catalase Previously Characterized By Electron Microscopy
Length = 527
Score = 89.0 bits (219), Expect = 6e-19, Method: Composition-based stats.
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
++T+Q IKNL V+ A LA DPDY +RDL+N+IA G YPS+T YIQVMTF +AE + +N
Sbjct: 236 YKTDQGIKNLSVEDAARLAHEDPDYGLRDLFNAIATGNYPSWTLYIQVMTFSEAEIFPFN 295
Query: 112 PFDLT 116
PFDLT
Sbjct: 296 PFDLT 300
Score = 83.6 bits (205), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/81 (59%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKN 60
AFGYFEVTHDIT+Y+KA VF IGKRT I VRFSTV GESGSADT R R F +K
Sbjct: 81 AFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGF----AVKF 136
Query: 61 LPVKRAEDLAGSD-PDYSIRD 80
DL G++ P + IRD
Sbjct: 137 YTEDGNWDLVGNNTPIFFIRD 157
>pdb|3RGP|A Chain A, Structural And Kinetic Analysis Of The Beef Liver Catalase
Complexed With Nitric Oxide
pdb|3RGP|B Chain B, Structural And Kinetic Analysis Of The Beef Liver Catalase
Complexed With Nitric Oxide
pdb|3RGP|C Chain C, Structural And Kinetic Analysis Of The Beef Liver Catalase
Complexed With Nitric Oxide
pdb|3RGP|D Chain D, Structural And Kinetic Analysis Of The Beef Liver Catalase
Complexed With Nitric Oxide
pdb|3RGS|A Chain A, Structural And Kinetic Analysis Of The Beef Liver Catalase
With The Ammonia As A Ligand
pdb|3RGS|B Chain B, Structural And Kinetic Analysis Of The Beef Liver Catalase
With The Ammonia As A Ligand
pdb|3RGS|C Chain C, Structural And Kinetic Analysis Of The Beef Liver Catalase
With The Ammonia As A Ligand
pdb|3RGS|D Chain D, Structural And Kinetic Analysis Of The Beef Liver Catalase
With The Ammonia As A Ligand
pdb|3RE8|A Chain A, Structural And Kinetic Analysis Of The Beef Liver Catalase
Interacting With Nitric Oxide
pdb|3RE8|B Chain B, Structural And Kinetic Analysis Of The Beef Liver Catalase
Interacting With Nitric Oxide
pdb|3RE8|C Chain C, Structural And Kinetic Analysis Of The Beef Liver Catalase
Interacting With Nitric Oxide
pdb|3RE8|D Chain D, Structural And Kinetic Analysis Of The Beef Liver Catalase
Interacting With Nitric Oxide
Length = 499
Score = 89.0 bits (219), Expect = 6e-19, Method: Composition-based stats.
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
++T+Q IKNL V+ A LA DPDY +RDL+N+IA G YPS+T YIQVMTF +AE + +N
Sbjct: 233 YKTDQGIKNLSVEDAARLAHEDPDYGLRDLFNAIATGNYPSWTLYIQVMTFSEAEIFPFN 292
Query: 112 PFDLT 116
PFDLT
Sbjct: 293 PFDLT 297
Score = 83.2 bits (204), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/81 (59%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKN 60
AFGYFEVTHDIT+Y+KA VF IGKRT I VRFSTV GESGSADT R R F +K
Sbjct: 78 AFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGF----AVKF 133
Query: 61 LPVKRAEDLAGSD-PDYSIRD 80
DL G++ P + IRD
Sbjct: 134 YTEDGNWDLVGNNTPIFFIRD 154
>pdb|7CAT|A Chain A, The Nadph Binding Site On Beef Liver Catalase
pdb|8CAT|A Chain A, The Nadph Binding Site On Beef Liver Catalase
pdb|8CAT|B Chain B, The Nadph Binding Site On Beef Liver Catalase
pdb|4BLC|A Chain A, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|4BLC|B Chain B, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|4BLC|C Chain C, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|4BLC|D Chain D, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|1TGU|A Chain A, The Crystal Structure Of Bovine Liver Catalase Without
Nadph
pdb|1TGU|B Chain B, The Crystal Structure Of Bovine Liver Catalase Without
Nadph
pdb|1TGU|C Chain C, The Crystal Structure Of Bovine Liver Catalase Without
Nadph
pdb|1TGU|D Chain D, The Crystal Structure Of Bovine Liver Catalase Without
Nadph
pdb|1TH2|A Chain A, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With Azide
pdb|1TH2|B Chain B, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With Azide
pdb|1TH2|C Chain C, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With Azide
pdb|1TH2|D Chain D, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With Azide
pdb|1TH3|A Chain A, Crystal Structure Of Nadph Depleted Bovine Live Catalase
Complexed With Cyanide
pdb|1TH3|B Chain B, Crystal Structure Of Nadph Depleted Bovine Live Catalase
Complexed With Cyanide
pdb|1TH3|C Chain C, Crystal Structure Of Nadph Depleted Bovine Live Catalase
Complexed With Cyanide
pdb|1TH3|D Chain D, Crystal Structure Of Nadph Depleted Bovine Live Catalase
Complexed With Cyanide
pdb|1TH4|A Chain A, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With 3-Amino-1,2,4-Triazole
pdb|1TH4|B Chain B, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With 3-Amino-1,2,4-Triazole
pdb|1TH4|C Chain C, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With 3-Amino-1,2,4-Triazole
pdb|1TH4|D Chain D, Crystal Structure Of Nadph Depleted Bovine Liver Catalase
Complexed With 3-Amino-1,2,4-Triazole
pdb|7CAT|B Chain B, The Nadph Binding Site On Beef Liver Catalase
Length = 506
Score = 89.0 bits (219), Expect = 6e-19, Method: Composition-based stats.
Identities = 40/65 (61%), Positives = 51/65 (78%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
++T+Q IKNL V+ A LA DPDY +RDL+N+IA G YPS+T YIQVMTF +AE + +N
Sbjct: 235 YKTDQGIKNLSVEDAARLAHEDPDYGLRDLFNAIATGNYPSWTLYIQVMTFSEAEIFPFN 294
Query: 112 PFDLT 116
PFDLT
Sbjct: 295 PFDLT 299
Score = 83.2 bits (204), Expect = 3e-17, Method: Composition-based stats.
Identities = 48/81 (59%), Positives = 54/81 (66%), Gaps = 5/81 (6%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKN 60
AFGYFEVTHDIT+Y+KA VF IGKRT I VRFSTV GESGSADT R R F +K
Sbjct: 80 AFGYFEVTHDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGF----AVKF 135
Query: 61 LPVKRAEDLAGSD-PDYSIRD 80
DL G++ P + IRD
Sbjct: 136 YTEDGNWDLVGNNTPIFFIRD 156
>pdb|1A4E|A Chain A, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|B Chain B, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|C Chain C, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|D Chain D, Catalase A From Saccharomyces Cerevisiae
Length = 488
Score = 73.2 bits (178), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 40/54 (74%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
AFGYFEVT DIT +A+FSKIGKRTK RFSTVGG+ GSADT R R F T
Sbjct: 62 AFGYFEVTDDITDICGSAMFSKIGKRTKCLTRFSTVGGDKGSADTVRDPRGFAT 115
Score = 65.9 bits (159), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 44/64 (68%)
Query: 53 RTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNP 112
+T+Q IKNL ++ A +AGS+PDY +DL+ +I G YPS+T YIQ MT A+ ++
Sbjct: 220 KTDQGIKNLTIEEATKIAGSNPDYCQQDLFEAIQNGNYPSWTVYIQTMTERDAKKLPFSV 279
Query: 113 FDLT 116
FDLT
Sbjct: 280 FDLT 283
>pdb|2ISA|A Chain A, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|B Chain B, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|C Chain C, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|D Chain D, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|E Chain E, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|F Chain F, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|G Chain G, Crystal Structure Of Vibrio Salmonicida Catalase
pdb|2ISA|H Chain H, Crystal Structure Of Vibrio Salmonicida Catalase
Length = 483
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 53/81 (65%), Gaps = 5/81 (6%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKN 60
A+G F VTHDIT+YTKA +FS IGK+T + RFSTV GE G+AD R IR F +K
Sbjct: 59 AYGTFTVTHDITKYTKAKIFSDIGKKTDMFARFSTVAGERGAADAERDIRGF----SLKF 114
Query: 61 LPVKRAEDLAGSD-PDYSIRD 80
+ DLAG++ P + +RD
Sbjct: 115 YTEEGNWDLAGNNTPVFFLRD 135
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
F + Q IKNL A +L G+D + RDL +SI +P +T +Q+M A +N
Sbjct: 214 FVSQQGIKNLSDAEAGELVGNDRESHQRDLLDSIDNQDFPKWTLKVQIMPEADAATVPYN 273
Query: 112 PFDLT 116
PFDLT
Sbjct: 274 PFDLT 278
>pdb|1H6N|A Chain A, Formation Of A Tyrosyl Radical Intermediate In Proteus
Mirabilis Catalase By Directed Mutagenesis And
Consequences For Nucleotide Reactivity
Length = 484
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLF 52
AFG F VTHDIT+YT+A +FS++GK+T++ RFSTV GE G+AD R IR F
Sbjct: 60 AFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGF 111
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 38/65 (58%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
FR Q IKNL AE L G D + S RDL+ +I G YP + IQ+M ++A +N
Sbjct: 215 FRCQQGIKNLMDDEAEALVGKDRESSQRDLFEAIERGDYPRWKLQIQIMPEKEASTVPYN 274
Query: 112 PFDLT 116
PFDLT
Sbjct: 275 PFDLT 279
>pdb|1H7K|A Chain A, Formation Of A Tyrosyl Radical Intermediate In Proteus
Mirabilis Catalase By Directed Mutagenesis And
Consequences For Nucleotide Reactivity
Length = 483
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLF 52
AFG F VTHDIT+YT+A +FS++GK+T++ RFSTV GE G+AD R IR F
Sbjct: 59 AFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGF 110
Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
+R Q IKNL AE L G D + S RDL+ +I G YP + IQ+M ++A +N
Sbjct: 214 YRCQQGIKNLMDDEAEALVGKDRESSQRDLFEAIERGDYPRWKLQIQIMPEKEASTVPYN 273
Query: 112 PFDLT 116
PFDLT
Sbjct: 274 PFDLT 278
>pdb|1M85|A Chain A, Structure Of Proteus Mirabilis Catalase For The Native
Form
pdb|1MQF|A Chain A, Compound I From Proteus Mirabilis Catalase
pdb|1NM0|A Chain A, Proteus Mirabilis Catalase In Complex With Formiate
pdb|2CAG|A Chain A, Catalase Compound Ii
pdb|2CAH|A Chain A, Structure Of Proteus Mirabilis Pr Catalase For The Native
Form (e- Fe(iii)) Complexed With Nadph
Length = 484
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLF 52
AFG F VTHDIT+YT+A +FS++GK+T++ RFSTV GE G+AD R IR F
Sbjct: 60 AFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGF 111
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 38/65 (58%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
FR Q IKNL AE L G D + S RDL+ +I G YP + IQ+M ++A +N
Sbjct: 215 FRCQQGIKNLMDDEAEALVGKDRESSQRDLFEAIERGDYPRWKLQIQIMPEKEASTVPYN 274
Query: 112 PFDLT 116
PFDLT
Sbjct: 275 PFDLT 279
>pdb|3HB6|A Chain A, Inactive Mutant H54f Of Proteus Mirabilis Catalase
Length = 484
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLF 52
AFG F VTHDIT+YT+A +FS++GK+T++ RFSTV GE G+AD R IR F
Sbjct: 60 AFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGF 111
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 38/65 (58%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
FR Q IKNL AE L G D + S RDL+ +I G YP + IQ+M ++A +N
Sbjct: 215 FRCQQGIKNLMDDEAEALVGKDRESSQRDLFEAIERGDYPRWKLQIQIMPEKEASTVPYN 274
Query: 112 PFDLT 116
PFDLT
Sbjct: 275 PFDLT 279
>pdb|1E93|A Chain A, High Resolution Structure And Biochemical Properties Of A
Recombinant Catalase Depleted In Iron
Length = 484
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLF 52
AFG F VTHDIT+YT+A +FS++GK+T++ RFSTV GE G+AD R IR F
Sbjct: 60 AFGTFTVTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGF 111
Score = 60.1 bits (144), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 38/65 (58%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
FR Q IKNL AE L G D + S RDL+ +I G YP + IQ+M ++A +N
Sbjct: 215 FRCQQGIKNLMDDEAEALVGKDRESSQRDLFEAIKRGDYPRWKLQIQIMPEKEASTVPYN 274
Query: 112 PFDLT 116
PFDLT
Sbjct: 275 PFDLT 279
>pdb|1QWL|A Chain A, Structure Of Helicobacter Pylori Catalase
pdb|1QWL|B Chain B, Structure Of Helicobacter Pylori Catalase
pdb|1QWM|A Chain A, Structure Of Helicobacter Pylori Catalase With Formic Acid
Bound
pdb|1QWM|B Chain B, Structure Of Helicobacter Pylori Catalase With Formic Acid
Bound
Length = 505
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKN 60
A+G F VT DIT+YTKA +FSK+GK+T+ RFSTV GE GSAD R R F +K
Sbjct: 62 AYGTFTVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGF----AMKY 117
Query: 61 LPVKRAEDLAGSD-PDYSIRD 80
+ DL G++ P + IRD
Sbjct: 118 YTEEGNWDLVGNNTPVFFIRD 138
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
F T Q +K+L + A ++ DPD + RDL+++IA G YP + IQVM E A+ ++++
Sbjct: 217 FHTMQGVKHLTNEEAAEIRKHDPDSNQRDLFDAIARGDYPKWKLSIQVMPEEDAKKYRFH 276
Query: 112 PFDLT 116
PFD+T
Sbjct: 277 PFDVT 281
>pdb|2XQ1|A Chain A, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|B Chain B, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|C Chain C, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|D Chain D, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|E Chain E, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|F Chain F, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|G Chain G, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|H Chain H, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|I Chain I, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|J Chain J, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|K Chain K, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|L Chain L, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|M Chain M, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|N Chain N, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|O Chain O, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
pdb|2XQ1|P Chain P, Crystal Structure Of Peroxisomal Catalase From The Yeast
Hansenula Polymorpha
Length = 509
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
F NQ + NL + A LAG DPD+S RDL+ +I G YPS+ YIQ MT EQ++ ++
Sbjct: 228 FIANQGVHNLLDEEAGRLAGEDPDHSTRDLWEAIEKGDYPSWECYIQTMTLEQSKKLPFS 287
Query: 112 PFDLT 116
FDLT
Sbjct: 288 VFDLT 292
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 36/54 (66%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A+G FEVT DIT A +GK+T+I RFSTVGGE GSADTAR R F T
Sbjct: 73 AYGVFEVTDDITDVCSAKFLDTVGKKTRIFTRFSTVGGEKGSADTARDPRGFAT 126
>pdb|2A9E|A Chain A, Helicobacter Pylori Catalase Compound I
pdb|2A9E|B Chain B, Helicobacter Pylori Catalase Compound I
pdb|2IQF|A Chain A, Crystal Structure Of Helicobacter Pylori Catalase Compound
I
pdb|2IQF|B Chain B, Crystal Structure Of Helicobacter Pylori Catalase Compound
I
Length = 505
Score = 65.9 bits (159), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKN 60
A+G F VT DIT+YTKA +FSK+GK+T+ RFSTV GE GSAD R R F +K
Sbjct: 62 AYGTFTVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGF----AMKY 117
Query: 61 LPVKRAEDLAGSD-PDYSIRD 80
+ DL G++ P + IRD
Sbjct: 118 YTEEGNWDLVGNNTPVFFIRD 138
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
F T Q +K+L + A ++ DPD + RDL+++IA G YP + IQVM E A+ ++++
Sbjct: 217 FHTMQGVKHLTNEEAAEIRKHDPDSNQRDLFDAIARGDYPKWKLSIQVMPEEDAKKYRFH 276
Query: 112 PFDLT 116
PFD+T
Sbjct: 277 PFDVT 281
>pdb|1SI8|A Chain A, Crystal Structure Of E. Faecalis Catalase
pdb|1SI8|B Chain B, Crystal Structure Of E. Faecalis Catalase
pdb|1SI8|C Chain C, Crystal Structure Of E. Faecalis Catalase
pdb|1SI8|D Chain D, Crystal Structure Of E. Faecalis Catalase
Length = 484
Score = 63.9 bits (154), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 44/65 (67%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
F+TNQ IKNL + AE++AG +PD+ I DL+N+I ++PS+T +Q++ + A K
Sbjct: 215 FKTNQGIKNLESQLAEEIAGKNPDFHIEDLHNAIENQEFPSWTLSVQIIPYADALTMKET 274
Query: 112 PFDLT 116
FD+T
Sbjct: 275 LFDVT 279
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKN 60
A G F+V+ + QYTKA S++GK T + RFSTV GE GS+DT R R F +K
Sbjct: 60 AHGIFKVSQSMAQYTKADFLSEVGKETPLFARFSTVAGELGSSDTLRDPRGF----ALKF 115
Query: 61 LPVKRAEDLAGSD-PDYSIRDLYNSIAAGKYPSY 93
+ DL G++ P + IRD A K+P +
Sbjct: 116 YTDEGNYDLVGNNTPIFFIRD------AIKFPDF 143
>pdb|1GWH|A Chain A, Atomic Resolution Structure Of Micrococcus Lysodeikticus
Catalase Complexed With Nadph
pdb|1GWE|A Chain A, Atomic Resolution Structure Of Micrococcus Lysodeikticus
Catalase
Length = 503
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
F + Q + NL A +AG + D+ +DL+ SIA G +P + YIQ + +E+ + +++N
Sbjct: 221 FISQQGVHNLSNDEATKIAGENADFHRQDLFESIAKGDHPKWDLYIQAIPYEEGKTYRFN 280
Query: 112 PFDLT 116
PFDLT
Sbjct: 281 PFDLT 285
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLF 52
AFG FEVT D+++YTKA VF + G +T+ +RFSTV GE GS DT R +R F
Sbjct: 67 AFGEFEVTEDVSKYTKALVF-QPGTKTETLLRFSTVAGELGSPDTWRDVRGF 117
>pdb|1GWF|A Chain A, Compound Ii Structure Of Micrococcus Lysodeikticus
Catalase
Length = 503
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
F + Q + NL A +AG + D+ +DL+ SIA G +P + YIQ + +E+ + +++N
Sbjct: 221 FISQQGVHNLSNDEATKIAGENADFHRQDLFESIAKGDHPKWDLYIQAIPYEEGKTYRFN 280
Query: 112 PFDLT 116
PFDLT
Sbjct: 281 PFDLT 285
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLF 52
AFG FEVT D+++YTKA VF + G +T+ +RFSTV GE GS DT R +R F
Sbjct: 67 AFGEFEVTEDVSKYTKALVF-QPGTKTETLLRFSTVAGELGSPDTWRDVRGF 117
>pdb|1HBZ|A Chain A, Catalase From Micrococcus Lysodeikticu
Length = 498
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
F + Q + NL A +AG + D+ +DL+ SIA G +P + YIQ + +E+ + +++N
Sbjct: 216 FISQQGVHNLSNDEATKIAGENADFHRQDLFESIAKGDHPKWDLYIQAIPYEEGKTYRFN 275
Query: 112 PFDLT 116
PFDLT
Sbjct: 276 PFDLT 280
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLF 52
AFG FEVT D+++YTKA VF + G +T+ +RFSTV GE GS DT R +R F
Sbjct: 62 AFGEFEVTEDVSKYTKALVF-QPGTKTETLLRFSTVAGELGSPDTWRDVRGF 112
>pdb|1P7Z|A Chain A, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
pdb|1P7Z|B Chain B, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
pdb|1P7Z|C Chain C, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
pdb|1P7Z|D Chain D, Crystal Structure Of The D181s Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 33/54 (61%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT RSIR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRSIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|1P7Y|A Chain A, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
pdb|1P7Y|B Chain B, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
pdb|1P7Y|C Chain C, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
pdb|1P7Y|D Chain D, Crystal Structure Of The D181a Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R+IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRAIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|1QWS|A Chain A, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
pdb|1QWS|B Chain B, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
pdb|1QWS|C Chain C, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
pdb|1QWS|D Chain D, Structure Of The D181n Variant Of Catalase Hpii From E.
Coli
Length = 753
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 33/54 (61%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R+IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRNIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|1GG9|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GG9|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GG9|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GG9|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GGF|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide.
pdb|1GGF|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide.
pdb|1GGF|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide.
pdb|1GGF|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|4ENR|A Chain A, Structure Of E530i Variant E. Coli Kate
pdb|4ENR|B Chain B, Structure Of E530i Variant E. Coli Kate
pdb|4ENR|C Chain C, Structure Of E530i Variant E. Coli Kate
pdb|4ENR|D Chain D, Structure Of E530i Variant E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|3TTW|A Chain A, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTW|B Chain B, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTW|C Chain C, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTW|D Chain D, Structure Of The F413e Variant Of E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|4ENV|A Chain A, Structure Of The S234i Variant Of E. Coli Kate
pdb|4ENV|B Chain B, Structure Of The S234i Variant Of E. Coli Kate
pdb|4ENV|C Chain C, Structure Of The S234i Variant Of E. Coli Kate
pdb|4ENV|D Chain D, Structure Of The S234i Variant Of E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|1P81|A Chain A, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
pdb|1P81|B Chain B, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
pdb|1P81|C Chain C, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
pdb|1P81|D Chain D, Crystal Structure Of The D181e Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVREIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|4ENW|A Chain A, Structure Of The S234n Variant Of E. Coli Kate
pdb|4ENW|B Chain B, Structure Of The S234n Variant Of E. Coli Kate
pdb|4ENW|C Chain C, Structure Of The S234n Variant Of E. Coli Kate
pdb|4ENW|D Chain D, Structure Of The S234n Variant Of E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|3TTX|A Chain A, Structure Of The F413k Variant Of E. Coli Kate
pdb|3TTX|B Chain B, Structure Of The F413k Variant Of E. Coli Kate
pdb|3TTX|C Chain C, Structure Of The F413k Variant Of E. Coli Kate
pdb|3TTX|D Chain D, Structure Of The F413k Variant Of E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|3TTU|A Chain A, Structure Of F413y/h128n Double Variant Of E. Coli Kate
pdb|3TTU|B Chain B, Structure Of F413y/h128n Double Variant Of E. Coli Kate
pdb|3TTU|C Chain C, Structure Of F413y/h128n Double Variant Of E. Coli Kate
pdb|3TTU|D Chain D, Structure Of F413y/h128n Double Variant Of E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|3TTT|A Chain A, Structure Of F413y Variant Of E. Coli Kate
pdb|3TTT|B Chain B, Structure Of F413y Variant Of E. Coli Kate
pdb|3TTT|C Chain C, Structure Of F413y Variant Of E. Coli Kate
pdb|3TTT|D Chain D, Structure Of F413y Variant Of E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|3P9S|A Chain A, Structure Of I274a Variant Of E. Coli Kate
pdb|3P9S|B Chain B, Structure Of I274a Variant Of E. Coli Kate
pdb|3P9S|C Chain C, Structure Of I274a Variant Of E. Coli Kate
pdb|3P9S|D Chain D, Structure Of I274a Variant Of E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|3P9Q|A Chain A, Structure Of I274c Variant Of E. Coli Kate
pdb|3P9Q|B Chain B, Structure Of I274c Variant Of E. Coli Kate
pdb|3P9Q|C Chain C, Structure Of I274c Variant Of E. Coli Kate
pdb|3P9Q|D Chain D, Structure Of I274c Variant Of E. Coli Kate
pdb|3PQ2|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ2|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ2|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ2|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images 1-6
pdb|3PQ3|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ3|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ3|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ3|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images 7-12
pdb|3PQ4|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ4|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ4|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ4|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
13-18
pdb|3PQ5|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ5|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ5|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ5|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
19-24
pdb|3PQ6|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ6|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ6|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ6|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
25-30
pdb|3PQ7|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ7|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ7|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ7|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
31-36
pdb|3PQ8|A Chain A, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
pdb|3PQ8|B Chain B, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
pdb|3PQ8|C Chain C, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
pdb|3PQ8|D Chain D, Structure Of I274c Variant Of E. Coli Kate[] - Images
37-42
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|3P9P|A Chain A, Structure Of I274v Variant Of E. Coli Kate
pdb|3P9P|B Chain B, Structure Of I274v Variant Of E. Coli Kate
pdb|3P9P|C Chain C, Structure Of I274v Variant Of E. Coli Kate
pdb|3P9P|D Chain D, Structure Of I274v Variant Of E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|1QF7|A Chain A, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
pdb|1QF7|B Chain B, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
pdb|1QF7|C Chain C, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
pdb|1QF7|D Chain D, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|1GGH|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant.
pdb|1GGH|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant.
pdb|1GGH|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant.
pdb|1GGH|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|4ENT|A Chain A, Structure Of The S234a Variant Of E. Coli Kate
pdb|4ENT|B Chain B, Structure Of The S234a Variant Of E. Coli Kate
pdb|4ENT|C Chain C, Structure Of The S234a Variant Of E. Coli Kate
pdb|4ENT|D Chain D, Structure Of The S234a Variant Of E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|3TTV|A Chain A, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTV|B Chain B, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTV|C Chain C, Structure Of The F413e Variant Of E. Coli Kate
pdb|3TTV|D Chain D, Structure Of The F413e Variant Of E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|1P80|A Chain A, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
pdb|1P80|B Chain B, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
pdb|1P80|C Chain C, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
pdb|1P80|D Chain D, Crystal Structure Of The D181q Variant Of Catalase Hpii
From E. Coli
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRQIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|1IPH|A Chain A, Structure Of Catalase Hpii From Escherichia Coli
pdb|1IPH|B Chain B, Structure Of Catalase Hpii From Escherichia Coli
pdb|1IPH|C Chain C, Structure Of Catalase Hpii From Escherichia Coli
pdb|1IPH|D Chain D, Structure Of Catalase Hpii From Escherichia Coli
pdb|1GGE|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1GGE|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1GGE|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1GGE|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|4ENS|A Chain A, Structure Of E530q Variant Of E. Coli Kate
pdb|4ENS|B Chain B, Structure Of E530q Variant Of E. Coli Kate
pdb|4ENS|C Chain C, Structure Of E530q Variant Of E. Coli Kate
pdb|4ENS|D Chain D, Structure Of E530q Variant Of E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|4ENQ|A Chain A, Structure Of E530d Variant E. Coli Kate
pdb|4ENQ|B Chain B, Structure Of E530d Variant E. Coli Kate
pdb|4ENQ|C Chain C, Structure Of E530d Variant E. Coli Kate
pdb|4ENQ|D Chain D, Structure Of E530d Variant E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|4ENP|A Chain A, Structure Of E530a Variant E. Coli Kate
pdb|4ENP|B Chain B, Structure Of E530a Variant E. Coli Kate
pdb|4ENP|C Chain C, Structure Of E530a Variant E. Coli Kate
pdb|4ENP|D Chain D, Structure Of E530a Variant E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|4ENU|A Chain A, Structure Of The S234d Variant Of E. Coli Kate
pdb|4ENU|B Chain B, Structure Of The S234d Variant Of E. Coli Kate
pdb|4ENU|C Chain C, Structure Of The S234d Variant Of E. Coli Kate
pdb|4ENU|D Chain D, Structure Of The S234d Variant Of E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|1GGJ|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant.
pdb|1GGJ|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant.
pdb|1GGJ|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant.
pdb|1GGJ|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant
Length = 753
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|1GGK|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant.
pdb|1GGK|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant.
pdb|1GGK|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant.
pdb|1GGK|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant
Length = 753
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|3P9R|A Chain A, Structure Of I274g Variant Of E. Coli Kate
pdb|3P9R|B Chain B, Structure Of I274g Variant Of E. Coli Kate
pdb|3P9R|C Chain C, Structure Of I274g Variant Of E. Coli Kate
pdb|3P9R|D Chain D, Structure Of I274g Variant Of E. Coli Kate
Length = 753
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|1YE9|A Chain A, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|B Chain B, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|C Chain C, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|D Chain D, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|I Chain I, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|J Chain J, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|K Chain K, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|L Chain L, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
Length = 226
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 51/99 (51%), Gaps = 11/99 (11%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKN 60
A GYF+ ++ TKA S K T + VRFSTV G +GSADT R IR F T K
Sbjct: 60 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFAT----KF 115
Query: 61 LPVKRAEDLAGSD-PDYSIRDLYNSIAAGKYPSYTFYIQ 98
+ DL G++ P + I+D A K+P + ++
Sbjct: 116 YTEEGIFDLVGNNTPIFFIQD------AHKFPDFVHAVK 148
>pdb|1CF9|A Chain A, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
pdb|1CF9|B Chain B, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
pdb|1CF9|C Chain C, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
pdb|1CF9|D Chain D, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
Length = 753
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 31/54 (57%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A GYF+ ++ TKA S K T + VRFST G +GSADT R IR F T
Sbjct: 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTCQGGAGSADTVRDIRGFAT 187
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 66 AEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
A+ L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 307 AQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357
>pdb|1SY7|A Chain A, Crystal Structure Of The Catalase-1 From Neurospora
Crassa, Native Structure At 1.75a Resolution.
pdb|1SY7|B Chain B, Crystal Structure Of The Catalase-1 From Neurospora
Crassa, Native Structure At 1.75a Resolution
Length = 715
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKN 60
AFG F+V + T A V + + T + VRFSTV G GSADT R +R F +K
Sbjct: 77 AFGKFKVYESASDLTMAPVLTDTSRETPVFVRFSTVLGSRGSADTVRDVRGF----AVKF 132
Query: 61 LPVKRAEDLAGSD-PDYSIRD---LYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
+ DL G++ P + I+D + I AGK + +V + A N W+
Sbjct: 133 YTEEGNWDLVGNNIPVFFIQDAIKFPDVIHAGKPEPHN---EVPQAQSAHNNFWD 184
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 58 IKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
+ +L A LAG DPD+ +DL+ +I G YP + F IQ + E + ++ D T
Sbjct: 242 VHSLVWDEALKLAGQDPDFHRKDLWEAIENGAYPKWKFGIQAIAEEDEHKFDFDILDAT 300
>pdb|4AUE|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUE|B Chain B, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUE|C Chain C, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUE|D Chain D, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
Length = 717
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A G F D + T A+ + GK+T + VRFSTV G GSADTAR + F T
Sbjct: 107 AHGTFTSYADWSNITAASFLNATGKQTPVFVRFSTVAGSRGSADTARDVHGFAT 160
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 38/65 (58%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
F++ Q +L + A+ L+G + D+ +DL+++I +G P + +Q++ QA+ + ++
Sbjct: 266 FKSRQGKASLVWEEAQVLSGKNADFHRQDLWDAIESGNGPEWDVCVQIVDESQAQAFGFD 325
Query: 112 PFDLT 116
D T
Sbjct: 326 LLDPT 330
>pdb|4AUL|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUL|B Chain B, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUL|C Chain C, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUL|D Chain D, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
Length = 719
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A G F D + T A+ + GK+T + VRFSTV G GSADTAR + F T
Sbjct: 109 AHGTFTSYADWSNITAASFLNATGKQTPVFVRFSTVAGSRGSADTARDVHGFAT 162
Score = 36.2 bits (82), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 38/65 (58%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
F++ Q +L + A+ L+G + D+ +DL+++I +G P + +Q++ QA+ + ++
Sbjct: 268 FKSRQGKASLVWEEAQVLSGKNADFHRQDLWDAIESGNGPEWDVCVQIVDESQAQAFGFD 327
Query: 112 PFDLT 116
D T
Sbjct: 328 LLDPT 332
>pdb|4AUM|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUM|B Chain B, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUM|C Chain C, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUM|D Chain D, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
Length = 719
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 31/54 (57%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A G F D + T A+ + GK+T + VRFSTV G GSADTAR + F T
Sbjct: 109 AHGTFTSYADWSNITAASFLNATGKQTPVFVRFSTVAGSRGSADTARDVHGFAT 162
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 38/65 (58%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
F++ Q +L + A+ L+G + D+ +DL+++I +G P + +Q++ QA+ + ++
Sbjct: 268 FKSRQGKASLVWEEAQVLSGKNADFHRQDLWDAIESGNGPEWDVCVQIVDESQAQAFGFD 327
Query: 112 PFDLT 116
D T
Sbjct: 328 LLDPT 332
>pdb|4AUN|A Chain A, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|B Chain B, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|C Chain C, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|D Chain D, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|E Chain E, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|F Chain F, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|G Chain G, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
pdb|4AUN|H Chain H, Crystal Structure, Recombinant Expression And Mutagenesis
Studies Of The Bifunctional Catalase-phenol Oxidase From
Scytalidium Thermophilum
Length = 719
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A G F D + T A+ + GK+T + VRFST G GSADTAR + F T
Sbjct: 109 AHGTFTSYADWSNITAASFLNATGKQTPVFVRFSTFAGSRGSADTARDVHGFAT 162
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 38/65 (58%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
F++ Q +L + A+ L+G + D+ +DL+++I +G P + +Q++ QA+ + ++
Sbjct: 268 FKSRQGKASLVWEEAQVLSGKNADFHRQDLWDAIESGNGPEWDVCVQIVDESQAQAFGFD 327
Query: 112 PFDLT 116
D T
Sbjct: 328 LLDPT 332
>pdb|2XF2|A Chain A, Pvc-At
pdb|2XF2|E Chain E, Pvc-At
Length = 688
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 29/54 (53%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A G F D + T A+ S GK T + RFSTV G GSADTAR + F T
Sbjct: 69 AHGTFTSYGDWSNLTAASFLSAEGKETPMFTRFSTVAGSRGSADTARDVHGFAT 122
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 30/53 (56%)
Query: 64 KRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
+ A+ AG + D+ +DL+ SI AG++P + +Q+M + + ++ D T
Sbjct: 240 EEAQQTAGKNADFMRQDLFQSIQAGRFPEWELGVQIMQEQDQLKFGFDLLDPT 292
>pdb|2IUF|A Chain A, The Structures Of Penicillium Vitale Catalase: Resting
State, Oxidised State (Compound I) And Complex With
Aminotriazole
pdb|2IUF|E Chain E, The Structures Of Penicillium Vitale Catalase: Resting
State, Oxidised State (Compound I) And Complex With
Aminotriazole
Length = 688
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 29/54 (53%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A G F D + T A+ S GK T + RFSTV G GSADTAR + F T
Sbjct: 69 AHGTFTSYGDWSNLTAASFLSAEGKETPMFTRFSTVAGSRGSADTARDVHGFAT 122
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 64 KRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDL 115
+ A+ AG + D+ +DL+ SI AG++P + +Q+M ++ + K+ FDL
Sbjct: 240 EEAQQTAGKNADFXRQDLFQSIQAGRFPEWELGVQIM--QEQDQLKFG-FDL 288
>pdb|3EJ6|A Chain A, Neurospora Crassa Catalase-3 Crystal Structure
pdb|3EJ6|B Chain B, Neurospora Crassa Catalase-3 Crystal Structure
pdb|3EJ6|C Chain C, Neurospora Crassa Catalase-3 Crystal Structure
pdb|3EJ6|D Chain D, Neurospora Crassa Catalase-3 Crystal Structure
Length = 688
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 29/54 (53%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRT 54
A G F D + T A+ K+T + VRFSTV G GSADTAR + F T
Sbjct: 77 AHGIFTSYGDWSNITAASFLGAKDKQTPVFVRFSTVAGSRGSADTARDVHGFAT 130
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 39/65 (60%)
Query: 52 FRTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWN 111
++T Q L + A+ LAG + D+ +DL+++I +G PS+ +Q++ ++A+ + ++
Sbjct: 236 WKTKQGKAALVWEEAQVLAGKNADFHRQDLWDAIESGNAPSWELAVQLIDEDKAQAYGFD 295
Query: 112 PFDLT 116
D T
Sbjct: 296 LLDPT 300
>pdb|2J2M|A Chain A, Crystal Structure Analysis Of Catalase From
Exiguobacterium Oxidotolerans
pdb|2J2M|B Chain B, Crystal Structure Analysis Of Catalase From
Exiguobacterium Oxidotolerans
pdb|2J2M|C Chain C, Crystal Structure Analysis Of Catalase From
Exiguobacterium Oxidotolerans
pdb|2J2M|D Chain D, Crystal Structure Analysis Of Catalase From
Exiguobacterium Oxidotolerans
Length = 491
Score = 40.8 bits (94), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 33/61 (54%)
Query: 56 QKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDL 115
+ + NL A ++ G D +++ D + +I G +P + ++QV+ EN+ ++P D
Sbjct: 221 EGVHNLSADEATEVQGKDFNHASNDTFQAIENGDFPEWDLFVQVLDPADVENFDFDPLDA 280
Query: 116 T 116
T
Sbjct: 281 T 281
Score = 35.8 bits (81), Expect = 0.007, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIRLFRTNQKIKN 60
A G F+V + + +YTKAA + G + RFSTV + S +T R R F +K
Sbjct: 62 AHGVFKVKNSMKKYTKAAFLQEEGTEVPVFARFSTVIHGTHSPETLRDPRGF----SVKF 117
Query: 61 LPVKRAEDLAGSD-PDYSIRD 80
+ D G++ P + IRD
Sbjct: 118 YTEEGNWDFVGNNLPVFFIRD 138
>pdb|1M7S|A Chain A, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
pdb|1M7S|B Chain B, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
pdb|1M7S|C Chain C, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
pdb|1M7S|D Chain D, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
Length = 484
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 56 QKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDL 115
Q IKNL K + D + DL +I G +P + Y+QV+ E+ + ++P D
Sbjct: 216 QGIKNLDPKEVAQVQSKDYSHLTNDLVGAIKKGDFPKWDLYVQVLKPEELAKFDFDPLDA 275
Query: 116 T 116
T
Sbjct: 276 T 276
>pdb|1YE9|E Chain E, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|F Chain F, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|G Chain G, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|H Chain H, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|M Chain M, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|N Chain N, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|O Chain O, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
pdb|1YE9|P Chain P, Crystal Structure Of Proteolytically Truncated Catalase
Hpii From E. Coli
Length = 259
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 69 LAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116
L G DPD+ R+L+ +I AG +P Y Q++ E + ++ D T
Sbjct: 2 LTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 49
>pdb|3HTX|A Chain A, Crystal Structure Of Small Rna Methyltransferase Hen1
pdb|3HTX|D Chain D, Crystal Structure Of Small Rna Methyltransferase Hen1
Length = 950
Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 5 FEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADT--ARSIRLFR 53
FE T + Q+ + A SK+GKR V FS VGG SG + A I +FR
Sbjct: 870 FEWTRE--QFNQWA--SKLGKRHNYSVEFSGVGG-SGEVEPGFASQIAIFR 915
>pdb|3LL0|A Chain A, Monomeric Griffithsin With Two Gly-Ser Insertions
Length = 125
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 26 RTKIGVRFSTVGGESGSADTARSIRLFRTN 55
T +G RF GG GSA+T ++++ + N
Sbjct: 79 ETNMGRRFGPYGGSGGSANTLSNVKVIQIN 108
>pdb|3LKY|A Chain A, Monomeric Griffithsin With A Single Gly-Ser Insertion
Length = 123
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 26 RTKIGVRFSTVGGESGSADTARSIRLFRTN 55
T +G RF GG GSA+T ++++ + N
Sbjct: 77 ETNMGRRFGPYGGSGGSANTLSNVKVIQIN 106
>pdb|3CTD|A Chain A, Crystal Structure Of A Putative Aaa Family Atpase From
Prochlorococcus Marinus Subsp. Pastoris
pdb|3CTD|B Chain B, Crystal Structure Of A Putative Aaa Family Atpase From
Prochlorococcus Marinus Subsp. Pastoris
Length = 213
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 71 GSDPDYSIRDLYNSIAAGKYPSYTF 95
GSDPD ++ L N + AG+ P++ F
Sbjct: 48 GSDPDATLYWLANMVEAGEDPNFIF 72
>pdb|2HYQ|A Chain A, Crystal Structure Of A Complex Of Griffithsin With
6alpha-Mannobiose
pdb|2HYQ|B Chain B, Crystal Structure Of A Complex Of Griffithsin With
6alpha-Mannobiose
pdb|2HYR|A Chain A, Crystal Structure Of A Complex Of Griffithsin With Maltose
pdb|2HYR|B Chain B, Crystal Structure Of A Complex Of Griffithsin With Maltose
pdb|2NU5|A Chain A, Crystal Structure Of A Complex Of Griffithsin
Cocrystallized With N- Acetylglucosamine
pdb|2NU5|B Chain B, Crystal Structure Of A Complex Of Griffithsin
Cocrystallized With N- Acetylglucosamine
pdb|2NUO|A Chain A, Crystal Structure Of A Complex Of Griffithsin With Glucose
pdb|2NUO|B Chain B, Crystal Structure Of A Complex Of Griffithsin With Glucose
pdb|2GUD|A Chain A, Crystal Structure Of A Complex Of Griffithsin With Mannose
At 0.94 A Resolution
pdb|2GUD|B Chain B, Crystal Structure Of A Complex Of Griffithsin With Mannose
At 0.94 A Resolution
pdb|2GUC|A Chain A, Crystal Structure Of A Complex Of Griffithsin With Mannose
At 1.78 A Resolution.
pdb|2GUC|B Chain B, Crystal Structure Of A Complex Of Griffithsin With Mannose
At 1.78 A Resolution.
pdb|2GTY|A Chain A, Crystal Structure Of Unliganded Griffithsin
pdb|2GTY|B Chain B, Crystal Structure Of Unliganded Griffithsin
pdb|2GUE|A Chain A, Crystal Structure Of A Complex Of Griffithsin With
N-Acetylglucosamine
pdb|2GUE|B Chain B, Crystal Structure Of A Complex Of Griffithsin With
N-Acetylglucosamine
Length = 122
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 26 RTKIGVRFSTVGGESGSADTARSIRLFRTN 55
T +G RF GG GSA+T ++++ + N
Sbjct: 76 ETNMGRRFGPYGGSGGSANTLSNVKVIQIN 105
>pdb|3LL2|A Chain A, Monomeric Griffithsin In Complex With A High-Mannose
Branched Carbohydrate
Length = 123
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 26 RTKIGVRFSTVGGESGSADTARSIRLFRTN 55
T +G RF GG GSA+T ++++ + N
Sbjct: 77 ETNMGRRFGPYGGSGGSANTLSNVKVIQIN 106
>pdb|3LL1|A Chain A, Monomeric Griffithsin With A Single Gly-Ser Insertion And
Mutations To Remove Residual Self-Association
Length = 122
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 26 RTKIGVRFSTVGGESGSADTARSIRLFRTN 55
T +G RF GG GSA+T ++++ + N
Sbjct: 77 ETNMGRRFGPYGGSGGSANTLSNVKVIQIN 106
>pdb|3R4E|A Chain A, Crystal Structure Of The A314p Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|3R4E|B Chain B, Crystal Structure Of The A314p Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|3R4E|C Chain C, Crystal Structure Of The A314p Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|3R4E|D Chain D, Crystal Structure Of The A314p Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
Length = 418
Score = 26.2 bits (56), Expect = 4.6, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 64 KRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKW 110
++ E G P + + D+ +AA KYP Y+ V E W W
Sbjct: 374 EKGELFVGETPGHGV-DIDEELAA-KYPYKPAYLPVARLEDGTMWNW 418
>pdb|2QJM|A Chain A, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|2QJM|B Chain B, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|2QJM|C Chain C, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
pdb|2QJM|D Chain D, Crystal Structure Of The K271e Mutant Of Mannonate
Dehydratase From Novosphingobium Aromaticivorans
Complexed With Mg And D-Mannonate
Length = 402
Score = 26.2 bits (56), Expect = 4.7, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 64 KRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKW 110
++ E G P + + D+ +AA KYP Y+ V E W W
Sbjct: 358 EKGELFVGETPGHGV-DIDEELAA-KYPYKPAYLPVARLEDGTMWNW 402
>pdb|2QJJ|A Chain A, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJJ|B Chain B, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJJ|C Chain C, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJJ|D Chain D, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans
pdb|2QJN|A Chain A, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
pdb|2QJN|B Chain B, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
pdb|2QJN|C Chain C, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
pdb|2QJN|D Chain D, Crystal Structure Of D-Mannonate Dehydratase From
Novosphingobium Aromaticivorans Complexed With Mg And
2-Keto-3-Deoxy-D-Gluconate
Length = 402
Score = 26.2 bits (56), Expect = 4.8, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Query: 64 KRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKW 110
++ E G P + + D+ +AA KYP Y+ V E W W
Sbjct: 358 EKGELFVGETPGHGV-DIDEELAA-KYPYKPAYLPVARLEDGTMWNW 402
>pdb|1D2I|A Chain A, Crystal Structure Of Restriction Endonuclease Bglii
Complexed With Dna 16-Mer
pdb|1D2I|B Chain B, Crystal Structure Of Restriction Endonuclease Bglii
Complexed With Dna 16-Mer
pdb|1DFM|A Chain A, Crystal Structure Of Restriction Endonuclease Bglii
Complexed With Dna 16-Mer
pdb|1DFM|B Chain B, Crystal Structure Of Restriction Endonuclease Bglii
Complexed With Dna 16-Mer
pdb|1ES8|A Chain A, Crystal Structure Of Free Bglii
Length = 223
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 10/48 (20%)
Query: 54 TNQKIK----------NLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYP 91
TNQ IK N+P+ + D G+D D+ RD + YP
Sbjct: 53 TNQYIKDELVPKHWKNNIPIPKRFDFLGTDIDFGKRDTLVEVQFSNYP 100
>pdb|2GUX|A Chain A, Selenomethionine Derivative Of Griffithsin
Length = 138
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 26 RTKIGVRFSTVGGESGSADTARSIRLFRTN 55
T G RF GG GSA+T ++++ + N
Sbjct: 92 ETNXGRRFGPYGGSGGSANTLSNVKVIQIN 121
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,428,318
Number of Sequences: 62578
Number of extensions: 121517
Number of successful extensions: 327
Number of sequences better than 100.0: 75
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 195
Number of HSP's gapped (non-prelim): 134
length of query: 116
length of database: 14,973,337
effective HSP length: 79
effective length of query: 37
effective length of database: 10,029,675
effective search space: 371097975
effective search space used: 371097975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)