Query psy8744
Match_columns 116
No_of_seqs 112 out of 1066
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 18:07:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8744.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8744hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ttv_A Catalase HPII; heme ori 100.0 2.7E-40 9.3E-45 286.8 11.7 116 1-116 134-357 (753)
2 3ej6_A Catalase-3; heme, hydro 100.0 4E-40 1.4E-44 283.9 12.4 116 1-116 77-300 (688)
3 2isa_A Catalase; peroxidase, h 100.0 2.4E-39 8.3E-44 270.5 12.4 116 1-116 59-278 (483)
4 2j2m_A Catalase; functional cl 100.0 2.9E-39 9.8E-44 270.4 12.8 116 1-116 62-281 (491)
5 1qwl_A KATA catalase; beta bar 100.0 4.5E-39 1.5E-43 269.9 13.7 116 1-116 62-281 (505)
6 1dgf_A Catalase; heme, NADPH, 100.0 3.2E-39 1.1E-43 270.4 11.6 116 1-116 77-296 (497)
7 2xq1_A Peroxisomal catalase; o 100.0 3.9E-39 1.3E-43 270.5 11.7 116 1-116 73-292 (509)
8 1m7s_A Catalase; beta barrel, 100.0 6.4E-39 2.2E-43 267.9 12.6 115 1-116 58-276 (484)
9 1a4e_A Catalase A; oxidoreduct 100.0 5.4E-39 1.8E-43 268.6 11.9 116 1-116 62-283 (488)
10 1si8_A Catalase; N-terminal AR 100.0 2.4E-39 8.2E-44 270.5 9.1 116 1-116 60-279 (484)
11 2iuf_A Catalase; oxidoreductas 100.0 1.1E-38 3.9E-43 275.0 12.9 116 1-116 69-292 (688)
12 1gwe_A Catalase; oxidoreductas 100.0 1.1E-38 3.6E-43 267.6 11.4 115 1-116 67-285 (503)
13 1sy7_A Catalase 1; heme oxidat 100.0 1.6E-37 5.5E-42 269.0 12.0 116 1-116 77-300 (715)
14 3e4w_A Putative uncharacterize 100.0 8.5E-34 2.9E-38 227.0 10.2 104 1-116 41-245 (320)
15 1u5u_A Allene oxide synthase-l 99.9 7.4E-28 2.5E-32 196.0 7.8 105 1-116 73-290 (374)
16 3dy5_A Allene oxide synthase-l 99.9 2.7E-26 9.4E-31 205.4 6.8 107 1-116 73-290 (1066)
17 2guj_A Phage-like element PBSX 52.1 15 0.00052 25.9 3.7 31 74-104 67-97 (155)
18 1gxi_E Photosystem I reaction 22.8 31 0.0011 21.5 1.1 14 24-37 31-44 (73)
19 1nkz_B Light-harvesting protei 22.4 44 0.0015 18.6 1.6 10 60-69 2-11 (41)
20 1jb0_E Photosystem 1 reaction 20.4 35 0.0012 21.4 1.0 15 23-37 30-44 (75)
No 1
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=100.00 E-value=2.7e-40 Score=286.77 Aligned_cols=116 Identities=37% Similarity=0.586 Sum_probs=114.5
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------ 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------ 50 (116)
|+|+|++|+++++||+|++|+++||+|||++|||+|+|++|+||+.||||
T Consensus 134 A~G~F~vt~d~s~~t~A~~F~~~Gk~tPv~vRFStv~G~~gs~Dt~rD~RGfAvKFyt~eGn~DlVgnN~PVFFirDp~k 213 (753)
T 3ttv_A 134 AHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHK 213 (753)
T ss_dssp EEEEEEESSCCTTTCCCGGGSCTTCCEEEEEEEECSSSCTTSCTTSSSCCEEEEEEEETTEEEEEEEESSSSCSCSCGGG
T ss_pred EEEEEEECCchhHHHhhhhhcCCCceeEEEEEecCCCCCCCCCccCCCCCcEEEEEEcCCCCcccccccCCccccCCHHH
Confidence 68999999999999999999999999999999999999999999999999
Q ss_pred ------------------------------------------------------------------------------ee
Q psy8744 51 ------------------------------------------------------------------------------LF 52 (116)
Q Consensus 51 ------------------------------------------------------------------------------~~ 52 (116)
||
T Consensus 214 Fpdfiha~k~~P~t~~~~~~~~~~~~wdF~s~~PEs~h~~~~l~sdrg~P~Syr~m~g~g~htf~~vn~~G~~~~VKfh~ 293 (753)
T 3ttv_A 214 FPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHW 293 (753)
T ss_dssp HHHHHHHHSCCTTTCCCTTCCCSHHHHHHHHHCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEEEECTTCCEEEEEEEE
T ss_pred HHHHHHHhhcCCccCCCCcccchHHHHHHHHhCHHHHHHHHHHhccCCCCCCcccCCcccccceEEEcCCCCEEEEEEEE
Confidence 99
Q ss_pred EeCccccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744 53 RTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116 (116)
Q Consensus 53 ~p~~G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T 116 (116)
+|.||+++|+++||.++++++|||+++|||++|++|+||+|+|+||||+++|+++|+|||||+|
T Consensus 294 ~p~~G~~~l~~~EA~~~~g~dpD~l~~DL~~~I~~G~~p~w~l~vQv~~~~d~~~~~f~~~D~T 357 (753)
T 3ttv_A 294 KPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPT 357 (753)
T ss_dssp EETTCCCBCCHHHHHHHHHHCTTHHHHHHHHHHHHTCCCEEEEEEEEEEGGGTTCSSSCTTCTT
T ss_pred EECCCCCCCCHHHHHHhhCCCchHHHHHHHHHHhcCCCCeEEEEEEeechhhhhcCCCCCccCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998
No 2
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=100.00 E-value=4e-40 Score=283.85 Aligned_cols=116 Identities=34% Similarity=0.536 Sum_probs=114.4
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------ 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------ 50 (116)
|+|+|++|+++++||+|++|+++|++|||++|||+|+|++|+||+.||||
T Consensus 77 A~G~F~vt~d~s~~t~A~~f~~~Gk~tPv~vRFStv~G~~gs~Dt~rD~RGfAvKFyt~eGn~DlVgnN~PVFFirDp~k 156 (688)
T 3ej6_A 77 AHGIFTSYGDWSNITAASFLGAKDKQTPVFVRFSTVAGSRGSADTARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIR 156 (688)
T ss_dssp EEEEEEECSBCTTTCCCSTTBSTTCEEEEEEEEECSSSCTTCCTTSSSCCEEEEEEEETTEEEEEEEESSSSCSCSSGGG
T ss_pred EEEEEEECCCchHhhhhHhhcCCCceeEEEEEecCCCCCCCCcccCCCCccEEEEEEcCCCCcccccccCCccccCCHHH
Confidence 68999999999999999999999999999999999999999999999999
Q ss_pred ------------------------------------------------------------------------------ee
Q psy8744 51 ------------------------------------------------------------------------------LF 52 (116)
Q Consensus 51 ------------------------------------------------------------------------------~~ 52 (116)
||
T Consensus 157 Fpdfiha~k~~P~t~~~~~~~~~~~~wdF~s~~PEs~h~~~~l~sdrg~P~Syr~m~g~g~htf~~vn~~G~~~~VKfh~ 236 (688)
T 3ej6_A 157 FPDLIHSVKPSPDNEVPQAATAHDSAWDFFSSQPSALHTLFWAMSGNGIPRSYRHMDGFGIHTFRLVTEDGKSKLVKWHW 236 (688)
T ss_dssp HHHHHHHHSCBTTTTBSTTCCCSHHHHHHHHHSGGGHHHHHHHHSGGGSBSCSTTCCEECCSCEEEECTTSCEEEEEEEE
T ss_pred HHHHHHhhccCCCcCCCChhhhhhHHHHHHHhChhhHHHHHHHhccCCCCCCcccCCcccccceEEEeCCCCEEEEEEEE
Confidence 99
Q ss_pred EeCccccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744 53 RTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116 (116)
Q Consensus 53 ~p~~G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T 116 (116)
+|.||+++|+++||.++++++|||+++|||++|++|+||+|+|+||||+++|+++|+|||||+|
T Consensus 237 ~p~~G~~~l~~~EA~~~~g~dpD~l~~DL~~~I~~G~~p~w~l~vQv~~~~d~~~~~f~~~D~T 300 (688)
T 3ej6_A 237 KTKQGKAALVWEEAQVLAGKNADFHRQDLWDAIESGNAPSWELAVQLIDEDKAQAYGFDLLDPT 300 (688)
T ss_dssp EESSCCCBCCHHHHHHHHHHCTTHHHHHHHHHHHTTCCCEEEEEEEEECGGGSSCSSSCTTCTT
T ss_pred EECCCCCCCCHHHHHHhhCCCccHHHHHHHHHHhcCCCceEEEEEEEechhhhhhcCCCCCcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998
No 3
>2isa_A Catalase; peroxidase, heme, oxidoreductase, iron, hydrogen peroxide; HET: OMT HEM; 1.97A {Vibrio salmonicida} PDB: 1m85_A* 1mqf_A* 1nm0_A* 2cag_A* 2cah_A* 1e93_A* 1h7k_A* 1h6n_A* 3hb6_A*
Probab=100.00 E-value=2.4e-39 Score=270.49 Aligned_cols=116 Identities=50% Similarity=0.776 Sum_probs=114.3
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------ 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------ 50 (116)
|+|+|++++++++||+|.+|+++||+|||++|||+|+|++|+||+.||||
T Consensus 59 a~G~F~vt~di~~~t~a~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlV~nN~PVFfirD~~k 138 (483)
T 2isa_A 59 AYGTFTVTHDITKYTKAKIFSDIGKKTDMFARFSTVAGERGAADAERDIRGFSLKFYTEEGNWDLAGNNTPVFFLRDPLK 138 (483)
T ss_dssp EEEEEEECSCCTTTCCCGGGSSTTCEEEEEEEEECSSCCTTSCSSCSSCCEEEEEEEETTEEEEEEEESSSCCSCSSGGG
T ss_pred EEEEEEECCCchHhhhchhccCCCceeeEEEEeecCCCCCCCCCcCCCcCceEEEEecCCCccceeeeCCCccccCCHHH
Confidence 68999999999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------eeEeCc
Q psy8744 51 --------------------------------------------------------------------------LFRTNQ 56 (116)
Q Consensus 51 --------------------------------------------------------------------------~~~p~~ 56 (116)
||+|.|
T Consensus 139 Fpd~i~a~k~~p~t~~~d~~~~~df~s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VK~h~~P~~ 218 (483)
T 2isa_A 139 FPDLNHAVKRDPRTNMRSAKNNWDFWTSLPEALHQVTIVMSDRGIPATYRHMHGFGSHTFSFINSDNERYWVKFHFVSQQ 218 (483)
T ss_dssp HHHHHHHHSBCTTTCSBCHHHHHHHHHTCGGGHHHHHHHHSGGGSBSSGGGSCEECCSCEEEECTTCCEEEEEEEEEESS
T ss_pred HHHHHHhcCCCCcCCCCCHHHHHHHHHhChhHhhHHHHhhccCCCCCCcccccccccCceeEEcCCCCEEEEEEEEEeCC
Confidence 999999
Q ss_pred cccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744 57 KIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116 (116)
Q Consensus 57 G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T 116 (116)
|+++|+++||.+++|++|||+++||+++|++|++|+|+|+||||+++|+++++|||||+|
T Consensus 219 Gv~~L~~~ea~~~~g~d~d~~~~dL~~aI~~g~~p~w~l~vQl~~~~d~~~~~~~~~D~T 278 (483)
T 2isa_A 219 GIKNLSDAEAGELVGNDRESHQRDLLDSIDNQDFPKWTLKVQIMPEADAATVPYNPFDLT 278 (483)
T ss_dssp CCCBCCHHHHHHHHHHCTTHHHHHHHHHHHTTCCCEEEEEEEEEEGGGGGTSSSCTTCTT
T ss_pred CCCCCCHHHHHHhcCCChhHHHHHHHHHHHcCCCceEEEEEEeeChhhhhcCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999998
No 4
>2j2m_A Catalase; functional class, oxidoreductase; HET: HEM; 2.4A {Exiguobacterium oxidotolerans}
Probab=100.00 E-value=2.9e-39 Score=270.44 Aligned_cols=116 Identities=30% Similarity=0.549 Sum_probs=114.3
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------ 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------ 50 (116)
|+|+|++++++++||+|.+|+++||+|||++|||+|+|++|+||+.||||
T Consensus 62 a~G~F~vt~di~~~t~a~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlV~nN~PVFfirD~~k 141 (491)
T 2j2m_A 62 AHGVFKVKNSMKKYTKAAFLQEEGTEVPVFARFSTVIHGTHSPETLRDPRGFSVKFYTEEGNWDFVGNNLPVFFIRDAMK 141 (491)
T ss_dssp EEEEEEECSCCTTTCCCGGGSSTTCEEEEEEEEECSSSCTTCCTTSCSCCEEEEEEEETTEEEEEEEESSSSCSCSSGGG
T ss_pred eEEEEEECCcchHhhhchhccCCCccceeEeeccCCCCCCCCCcccCCcCceEEEEecCCcceeeeecCCCccccCCHHH
Confidence 68999999999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------eeEeCc
Q psy8744 51 --------------------------------------------------------------------------LFRTNQ 56 (116)
Q Consensus 51 --------------------------------------------------------------------------~~~p~~ 56 (116)
||+|.|
T Consensus 142 Fpd~i~a~k~~p~t~~~d~~~~wdf~s~~Pes~h~~~~l~sdrg~P~syr~m~g~g~htf~~vn~~G~~~~VK~h~~P~~ 221 (491)
T 2j2m_A 142 FPDMVHSLKPDPRTNIQDPDRYWDFMTLRPESTNMLMHIFTDEGIPASYRKMRGSSVHSFKWVNAHGNTVYIKLRWVPKE 221 (491)
T ss_dssp HHHHHHHHSCCTTTCSCCHHHHHHHHHHSGGGHHHHHHHTSGGGSBSCGGGCCEECCSCEEEECTTCCEEEEEEEEEETT
T ss_pred HHHHHHhcCCCCCCCCCCHHHHHHHHHhCchHHhHHHHHhccCCCCCChhhccCccccceeeEcCCCCEEEEEEEEEeCC
Confidence 999999
Q ss_pred cccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744 57 KIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116 (116)
Q Consensus 57 G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T 116 (116)
|+++|+++||.+++|.+|||+++||+++|++|++|+|+|+||||+++|+++++|||||+|
T Consensus 222 Gv~~L~~~ea~~~~g~d~d~~~~DL~~aI~~G~~p~w~l~vQl~~~~d~~~~~~~~~D~T 281 (491)
T 2j2m_A 222 GVHNLSADEATEVQGKDFNHASNDTFQAIENGDFPEWDLFVQVLDPADVENFDFDPLDAT 281 (491)
T ss_dssp CCCBCCHHHHHHHHHHCTTHHHHHHHHHHHTTCCCEEEEEEEEECGGGGGGSSSCTTCTT
T ss_pred CCCCCCHHHHHHhcCCChhHHHHHHHHHHHcCCCCeEEEEEEeechhhhhcCCCCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999998
No 5
>1qwl_A KATA catalase; beta barrel, azide complex, oxyferryl complex, oxidoreductas; HET: HEM; 1.60A {Helicobacter pylori} SCOP: e.5.1.1 PDB: 1qwm_A* 2a9e_A* 2iqf_A*
Probab=100.00 E-value=4.5e-39 Score=269.90 Aligned_cols=116 Identities=50% Similarity=0.817 Sum_probs=114.4
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------ 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------ 50 (116)
|+|+|++++++++||+|.+|+++|++|||++|||+|+|++|+||+.||||
T Consensus 62 a~G~F~vt~di~~~t~A~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~k 141 (505)
T 1qwl_A 62 AYGTFTVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIK 141 (505)
T ss_dssp EEEEEEECSCCTTTCCCGGGSSTTCEEEEEEEEECSSCCTTSCSSSSSCCEEEEEEEETTEEEEEEEESSSCCSCSSGGG
T ss_pred eEEEEEECCCchHhhhchhccCCCceeeEEEEeccCCCCCCCCcccCCcCceEEEEecCCCceeEeecCCCccccCCHHH
Confidence 68999999999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------eeEeCc
Q psy8744 51 --------------------------------------------------------------------------LFRTNQ 56 (116)
Q Consensus 51 --------------------------------------------------------------------------~~~p~~ 56 (116)
||+|.|
T Consensus 142 Fpd~iha~k~~p~t~~~d~~~~wdf~s~~PEs~h~~~~l~sdrg~P~syr~m~g~g~htf~~vn~~G~~~~VKfh~~P~~ 221 (505)
T 1qwl_A 142 FPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQ 221 (505)
T ss_dssp HHHHHHHHSCCTTTCSCCHHHHHHHHHHCGGGHHHHHHHHSGGGSBSSGGGSCEECCSCEEEECTTCCEEEEEEEEEETT
T ss_pred HHHHHHhcCCCCcCCCCCHHHHHHHHHhChhHHHHHHHHhccCCCCCCcccccccccCceeEEcCCCCEEEEEEEEEeCC
Confidence 999999
Q ss_pred cccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744 57 KIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116 (116)
Q Consensus 57 G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T 116 (116)
|+++|+++||.+++|.+|||+++||+++|++|++|+|+|+||||+++|+++++|||||+|
T Consensus 222 Gv~~L~~~ea~~~~g~d~d~~~~DL~~aI~~G~~p~w~l~VQl~~~~d~~~~~~~~~D~T 281 (505)
T 1qwl_A 222 GVKHLTNEEAAEIRKHDPDSNQRDLFDAIARGDYPKWKLSIQVMPEEDAKKYRFHPFDVT 281 (505)
T ss_dssp CCCBCCHHHHHHHHTTCTTHHHHHHHHHHHTTCCCEEEEEEEEEEGGGTTTCSSCTTCTT
T ss_pred CcCCCCHHHHHHhcCCCccHHHHHHHHHHHcCCCceEEEEEEeechHHhhcCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999999998
No 6
>1dgf_A Catalase; heme, NADPH, hydrogen peroxide, oxidoreductase; HET: HEM NDP; 1.50A {Homo sapiens} SCOP: e.5.1.1 PDB: 1dgg_A* 1f4j_A* 1qqw_A* 1dgh_A* 1dgb_A* 3rgp_A* 3re8_A* 3rgs_A* 3nwl_A* 4blc_A* 1th2_A* 1th3_A* 1th4_A* 1tgu_A* 7cat_A* 8cat_A*
Probab=100.00 E-value=3.2e-39 Score=270.43 Aligned_cols=116 Identities=70% Similarity=1.109 Sum_probs=114.3
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------ 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------ 50 (116)
|+|+|++++++++||+|.+|+++||+|||++|||+|+|++|+||+.||||
T Consensus 77 a~G~F~vt~di~~~t~a~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~k 156 (497)
T 1dgf_A 77 AFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFIRDPIL 156 (497)
T ss_dssp EEEEEEECSCCTTTCCCGGGSSTTCEEEEEEEEECSSSCTTSCSSSSSCCEEEEEEEETTEEEEEEEESSSSCSCSSGGG
T ss_pred eEEEEEECCChhHhhhchhccCCCceeeEEEEeecCCCCCCCCCcCCCcCceEEEEecCCCceeEeecCCCccccCCHHH
Confidence 68999999999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------eeEeCc
Q psy8744 51 --------------------------------------------------------------------------LFRTNQ 56 (116)
Q Consensus 51 --------------------------------------------------------------------------~~~p~~ 56 (116)
||+|.|
T Consensus 157 Fpd~i~a~k~~p~t~~~d~~~~wdf~s~~PEs~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VKfh~~P~~ 236 (497)
T 1dgf_A 157 FPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQ 236 (497)
T ss_dssp HHHHHHHHSBCTTTCSBCHHHHHHHHHHCGGGHHHHHHHTSGGGSBSSSTTSCEECCSCEEEECTTSCEEEEEEEEEETT
T ss_pred HHHHHHhcCCCCcCCCCCHHHHHHHHHhCchhhhHHHHHhccCCCCCCccccccccccceEEEcCCCCEEEEEEEEEeCC
Confidence 999999
Q ss_pred cccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744 57 KIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116 (116)
Q Consensus 57 G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T 116 (116)
|+++|+++||.+++|.+|||+++||+++|++|++|+|+|+||||+++|+++++|||||+|
T Consensus 237 Gv~~L~~~ea~~~~g~d~d~~~~DL~~aI~~G~~p~w~l~vQl~~~~d~~~~~~~~~D~T 296 (497)
T 1dgf_A 237 GIKNLSVEDAARLSQEDPDYGIRDLFNAIATGKYPSWTFYIQVMTFNQAETFPFNPFDLT 296 (497)
T ss_dssp CCCBCCHHHHHHHHHHCTTHHHHHHHHHHHTTCCCEEEEEEEEECHHHHHHCSSCTTCTT
T ss_pred CCCCCCHHHHHHhcCCCccHHHHHHHHHHHcCCCceEEEEEEeechhhhhcCCCCCCcCc
Confidence 999999999999999999999999999999999999999999999999999999999998
No 7
>2xq1_A Peroxisomal catalase; oxidoreductase, hydrogen peroxide detoxification, PTS1; HET: HEM; 2.90A {Pichia angusta}
Probab=100.00 E-value=3.9e-39 Score=270.48 Aligned_cols=116 Identities=53% Similarity=0.806 Sum_probs=114.3
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------ 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------ 50 (116)
|+|+|++++++++||+|.+|+++||+|||++|||+|+|++|+||+.||||
T Consensus 73 a~G~F~vt~dis~~t~A~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~k 152 (509)
T 2xq1_A 73 AYGVFEVTDDITDVCSAKFLDTVGKKTRIFTRFSTVGGEKGSADTARDPRGFATKFYTEDGNLDLVYNNTPIFFIRDPIK 152 (509)
T ss_dssp EEEEEEECSCCTTTCCCGGGSSTTCEEEEEEEEECSSCCTTSCTTSSSCCEEEEEEEETTEEEEEEEESSSCCSCSSGGG
T ss_pred eEEEEEECCchhHhhhchhccCCCceeeEEEEeecCCCCCCCCCcCCCcCceEEEEecCCCceeeeecCCCccccCCHHH
Confidence 68999999999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------eeEeCc
Q psy8744 51 --------------------------------------------------------------------------LFRTNQ 56 (116)
Q Consensus 51 --------------------------------------------------------------------------~~~p~~ 56 (116)
||+|.|
T Consensus 153 Fpd~iha~k~~p~t~~~d~~~~~df~s~~Pes~h~~~~l~sdrg~P~syr~m~g~g~htf~~vn~~G~~~~VKfh~~P~~ 232 (509)
T 2xq1_A 153 FPHFIHTQKRNPATNLKDPNMFWDYLTANDESLHQVMYLFSNRGTPASYRTMNGYSGHTYKWYNSKGEWVYVQVHFIANQ 232 (509)
T ss_dssp HHHHHHHHSBCTTTCSBCHHHHHHHHHHSGGGHHHHHHHHSGGGSBSCSTTCCEECCSCEEEECTTSCEEEEEEEEEETT
T ss_pred HHHHHHHhCCCCccCCCCHHHHHHHHHhChhhhhhHHHhhccCCCCCChhhccCccccceeeecCCCCEEEEEEEEEeCC
Confidence 999999
Q ss_pred cccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744 57 KIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116 (116)
Q Consensus 57 G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T 116 (116)
|+++|+++||.+++|.+|||+++||+++|++|++|+|+|+||||+++|+++++|||||+|
T Consensus 233 Gv~~L~~~ea~~~~g~d~d~~~~DL~~~I~~g~~p~w~l~VQl~~~~d~~~~~f~~~D~T 292 (509)
T 2xq1_A 233 GVHNLLDEEAGRLAGEDPDHSTRDLWEAIEKGDYPSWECYIQTMTLEQSKKLPFSVFDLT 292 (509)
T ss_dssp CCCBCCHHHHHHHHHHCTTHHHHHHHHHHHHTCCCEEEEEEEEECHHHHTTCSSCTTCTT
T ss_pred CCCCCCHHHHHHhcCCChhHHHHHHHHHHHcCCCceEEEEEEeecHHHHhcCCCCCCcCc
Confidence 999999999999999999999999999999999999999999999999999999999998
No 8
>1m7s_A Catalase; beta barrel, alpha helical domain, oxidoreductase; HET: HEM; 1.80A {Pseudomonas syringae} SCOP: e.5.1.1
Probab=100.00 E-value=6.4e-39 Score=267.94 Aligned_cols=115 Identities=33% Similarity=0.526 Sum_probs=113.1
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------ 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------ 50 (116)
|+|+|++++++++||+|.+| ++||+|||++|||+|+|++|+||+.||||
T Consensus 58 a~G~F~vt~di~~~t~a~~F-~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~k 136 (484)
T 1m7s_A 58 VKGEFTASADISDLSKATVF-KSGEKTPVFVRFSSVVHGNHSPETLRDPHGFATKFYTADGNWDLVGNNFPTFFIRDAIK 136 (484)
T ss_dssp EEEEEEECSCCTTTCCCGGG-STTCEEEEEEEEECSSSCTTCCTTSCSCCEEEEEEEETTEEEEEEEESSSSCSCSCGGG
T ss_pred EEEEEEECCchHHhhhcccc-CCCCeeEEEEEeccCCCCCCCCcccCCcCceEEEEecCCCcceeeecCCCccccCCHHH
Confidence 68999999999999999999 88999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------eeEeCc
Q psy8744 51 --------------------------------------------------------------------------LFRTNQ 56 (116)
Q Consensus 51 --------------------------------------------------------------------------~~~p~~ 56 (116)
||+|.|
T Consensus 137 Fpd~i~a~k~~p~t~~~d~~~~~df~s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VK~h~~P~~ 216 (484)
T 1m7s_A 137 FPDMVHAFKPDPRTNLDNDSRRFDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNGVHAYKLVNAKGEVHYVKFHWKSLQ 216 (484)
T ss_dssp HHHHHHHHSCCTTTSSCCHHHHHHHHHTCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEEEECTTSCEEEEEEEEEETT
T ss_pred HHHHHHHhCcCCccCCCCHHHHHHHHHhChhHhhHHHHhhccCCCCCccccccccccCceeeEcCCCCEEEEEEEEEeCC
Confidence 999999
Q ss_pred cccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744 57 KIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116 (116)
Q Consensus 57 G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T 116 (116)
|+++|+++||.++++.+|||+++||+++|++|++|+|+|+||||+++|+++++|||||+|
T Consensus 217 Gv~~L~~~ea~~~~g~dpd~l~~DL~~aI~~g~~p~w~l~vQl~~~~d~~~~~~~~~D~T 276 (484)
T 1m7s_A 217 GIKNLDPKEVAQVQSKDYSHLTNDLVGAIKKGDFPKWDLYVQVLKPEELAKFDFDPLDAT 276 (484)
T ss_dssp CCCBCCHHHHHHHHHHCSCHHHHHHHHHHHTTCCCEEEEEEEEECGGGGGGSSSCTTCTT
T ss_pred CCCCCCHHHHHHhcCCChhhhHHHHHHHHHcCCCceEEEEEEeecHHHhhcCCCCccCCC
Confidence 999999999999999999999999999999999999999999999999999999999998
No 9
>1a4e_A Catalase A; oxidoreductase, peroxidase; HET: HEM; 2.40A {Saccharomyces cerevisiae} SCOP: e.5.1.1
Probab=100.00 E-value=5.4e-39 Score=268.61 Aligned_cols=116 Identities=57% Similarity=0.887 Sum_probs=114.3
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------ 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------ 50 (116)
|+|+|++++++++||+|.+|+++||+|||++|||+|+|++|+||+.||||
T Consensus 62 a~G~F~vt~di~~~t~a~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlV~nN~PVFfirD~~k 141 (488)
T 1a4e_A 62 AFGYFEVTDDITDICGSAMFSKIGKRTKCLTRFSTVGGDKGSADTVRDPRGFATKFYTEEGNLDWVYNNTPVFFIRDPSK 141 (488)
T ss_dssp EEEEEEECSCCTTTCCCGGGSSTTCEEEEEEEEECSSSCTTCCSSSSSCCEEEEEEEETTEEEEEEEESSSSCSCSCTTH
T ss_pred EEEEEEECCCchHhhhchhccCCCceeeEEEEeecCCCCCCCCCccCCcCceEEEEecCCCccceeeecCCccccCCHHH
Confidence 68999999999999999999999999999999999999999999999999
Q ss_pred ----------------------------------------------------------------------------eeEe
Q psy8744 51 ----------------------------------------------------------------------------LFRT 54 (116)
Q Consensus 51 ----------------------------------------------------------------------------~~~p 54 (116)
||+|
T Consensus 142 Fpd~i~a~k~~p~t~~~d~~~~wdf~s~~~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VKfh~~P 221 (488)
T 1a4e_A 142 FPHFIHTQKRNPQTNLRDADMFWDFLTTPENQVAIHQVMILFSDRGTPANYRSMHGYSGHTYKWSNKNGDWHYVQVHIKT 221 (488)
T ss_dssp HHHHHHHHSCCTTTCSCCHHHHHHHHTSGGGGGGHHHHHHHHSGGGSBSCGGGCCEECCSCEEEECTTSCEEEEEEEEEE
T ss_pred HHHHHHhcCCCCCCCCCCHHHHHHHHhccCChHHhhHHHHhhccCCCCCCccccccccccceEEEcCCCCEEEEEEEEEE
Confidence 9999
Q ss_pred CccccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744 55 NQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116 (116)
Q Consensus 55 ~~G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T 116 (116)
.||+++|+++||.+++|.+|||+++||+++|++|++|+|+|+||||+++|+++++|||||+|
T Consensus 222 ~~Gv~~L~~~ea~~~~g~d~d~~~~dL~~~I~~g~~p~w~l~vQl~~~~d~~~~~f~~~D~T 283 (488)
T 1a4e_A 222 DQGIKNLTIEEATKIAGSNPDYCQQDLFEAIQNGNYPSWTVYIQTMTERDAKKLPFSVFDLT 283 (488)
T ss_dssp SSCCCBCCHHHHHHHHHHCTTHHHHHHHHHHHTTCCCEEEEEEEEECHHHHHTSSSCTTCTT
T ss_pred CCCCCCCCHHHHHHhcCCChhHHHHHHHHHHHcCCCCeEEEEEEeecHHHHhcCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998
No 10
>1si8_A Catalase; N-terminal ARM, anti-parallel beta-barrel, wrapping region, terminal helical region, tetramer, heme group, oxidoreducta; HET: HEM; 2.30A {Enterococcus faecalis} SCOP: e.5.1.1
Probab=100.00 E-value=2.4e-39 Score=270.52 Aligned_cols=116 Identities=47% Similarity=0.730 Sum_probs=114.3
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------ 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------ 50 (116)
|+|+|++++++++||+|.+|+++||+|||++|||+|+|++|+||+.||||
T Consensus 60 a~G~F~vt~di~~~t~a~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlV~nN~PvFfirD~~k 139 (484)
T 1si8_A 60 AHGIFKVSQSMAQYTKADFLSEVGKETPLFARFSTVAGELGSSDTLRDPRGFALKFYTDEGNYDLVGNNTPIFFIRDAIK 139 (484)
T ss_dssp EEEEEEESSCCTTTCCCGGGSSTTCEEEEEEEEECSSCCTTCCSSSSSCCEEEEEEEETTEEEEEEEESSSSCSCSCGGG
T ss_pred eEEEEEECCchhHhhhchhccCCCceeeEEEEecCCCCCCCCCcccCCcCceEEEEecCCCceeeeeccCcccccCCHHH
Confidence 68999999999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------eeEeCc
Q psy8744 51 --------------------------------------------------------------------------LFRTNQ 56 (116)
Q Consensus 51 --------------------------------------------------------------------------~~~p~~ 56 (116)
||+|.|
T Consensus 140 Fpd~i~a~k~~p~t~~~d~~~~wdf~s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VK~h~~P~~ 219 (484)
T 1si8_A 140 FPDFIHSQKRNPRTHLKSPEAVWDFWSHSPESLHQVTILMSDRGIPLSFRHMHGFGSHTFKWVNAAGEVFFVKYHFKTNQ 219 (484)
T ss_dssp HHHHHHHHSBCTTTCSBCHHHHHHHHHTCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEEEECTTCCEEEEEEEEEETT
T ss_pred HHHHHHhcCCCCcCCCCCHHHHHHHHHhCchhHHHHHHHhccCCCCCCcccccccccCceEEEcCCCCEEEEEEEEEeCC
Confidence 999999
Q ss_pred cccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744 57 KIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116 (116)
Q Consensus 57 G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T 116 (116)
|+++|+++||.+++|++|||+++||+++|++|++|+|+|+||||+++|+++++|||||+|
T Consensus 220 Gv~~L~~~ea~~~~g~d~d~~~~DL~~aI~~g~~p~w~l~vQl~~~~d~~~~~~~~~D~T 279 (484)
T 1si8_A 220 GIKNLESQLAEEIAGKNPDFHIEDLHNAIENQEFPSWTLSVQIIPYADALTMKETLFDVT 279 (484)
T ss_dssp CCCBCCHHHHHHHHHHCTTHHHHHHHHHHHTTCCCEEEEEEEEEEHHHHTTCHHHHTCTT
T ss_pred CCCCCCHHHHHHhcCCChhHhHHHHHHHHHCCCCceEEEEEEeecchhhhcCCCCCCcCC
Confidence 999999999999999999999999999999999999999999999999999999999998
No 11
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=100.00 E-value=1.1e-38 Score=275.04 Aligned_cols=116 Identities=34% Similarity=0.522 Sum_probs=114.4
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------ 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------ 50 (116)
|+|+|++++++++||+|.+|+++||+|||++|||+|+|++|+||+.||||
T Consensus 69 a~G~F~vt~d~~~~t~A~~F~~~Gk~tPv~vRFStv~G~~gs~Dt~rd~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~k 148 (688)
T 2iuf_A 69 AHGTFTSYGDWSNLTAASFLSAEGKETPMFTRFSTVAGSRGSADTARDVHGFATRFYTDEGNFDIVGNNIPVFFIQDAIL 148 (688)
T ss_dssp EEEEEEESSCCTTTCCCGGGSSTTCEEEEEEEEECSSCCTTCCTTSSCCCEEEEEEEETTEEEEEEEESSSSCSCSCGGG
T ss_pred eEEEEEECCCchHhhhhhhhcCCCceEEEEEEccCCCCCCCCCcccCCcCceEEEEecCCCCcceeeecCCccccCCHHH
Confidence 68999999999999999999999999999999999999999999999999
Q ss_pred ------------------------------------------------------------------------------ee
Q psy8744 51 ------------------------------------------------------------------------------LF 52 (116)
Q Consensus 51 ------------------------------------------------------------------------------~~ 52 (116)
||
T Consensus 149 Fpd~i~a~k~~P~t~~~~~~~a~~~~~df~s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VKfh~ 228 (688)
T 2iuf_A 149 FPDLIHAVKPRGDNQIPQAATAHDSAWDFFSQQPSVLHTLLWAXAGHGIPRSFRHVNGFGVHTFRLVTDDGKTKLVKFHW 228 (688)
T ss_dssp HHHHHHHHSCCTTTCCSTTCCCSHHHHHHHHHSGGGHHHHHHHHTGGGSBSCGGGCCEEEEEEEEEECTTCCEEEEEEEE
T ss_pred HHHHHHHhCCCCCCCCCchhhhHHHHHHHHHhCcchHHHHHHHccCCCCCCCcccCCcccccceEEEccCCCEEEEEEEE
Confidence 99
Q ss_pred EeCccccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744 53 RTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116 (116)
Q Consensus 53 ~p~~G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T 116 (116)
+|.||+++|+++||.++++.+|||+++|||++|++|+||+|+|+||||+++|+++|+|||||+|
T Consensus 229 ~P~~G~~~L~~~ea~~~~g~dpd~l~~dL~~~I~~g~~p~w~l~vQl~~~~d~~~~~~~~~D~T 292 (688)
T 2iuf_A 229 KGLQGKASFVWEEAQQTAGKNADFXRQDLFQSIQAGRFPEWELGVQIMQEQDQLKFGFDLLDPT 292 (688)
T ss_dssp EESSCCCBCCHHHHHHHHHHCTTHHHHHHHHHHHTTCCCEEEEEEEEECGGGTTTTSSCTTCTT
T ss_pred EeCCCcCCCCHHHHHHhcCCCcchhhHHHHHHHhcCCCceEEEEEEEechHHhhcCCCCCCcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998
No 12
>1gwe_A Catalase; oxidoreductase, hdyrogen-peroxide:hydrogen peroxide oxidoreductase; HET: HEM; 0.88A {Micrococcus luteus} SCOP: e.5.1.1 PDB: 1gwh_A* 1hbz_A* 1gwf_A*
Probab=100.00 E-value=1.1e-38 Score=267.57 Aligned_cols=115 Identities=47% Similarity=0.823 Sum_probs=113.1
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------ 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------ 50 (116)
|+|+|++++++++||+|.+|+. ||+|||++|||+|+|++|+||+.||||
T Consensus 67 a~G~F~vt~di~~~t~A~~F~~-Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~eGn~DlVgnN~PVFfirD~~k 145 (503)
T 1gwe_A 67 AFGEFEVTEDVSKYTKALVFQP-GTKTETLLRFSTVAGELGSPDTWRDVRGFALRFYTEEGNYDLVGNNTPIFFLRDPMK 145 (503)
T ss_dssp EEEEEEECSCCTTTCCCGGGST-TCEEEEEEEEECSSSCTTSCTTSSCCCEEEEEEEETTEEEEEEEESSSCCSCSSGGG
T ss_pred EEEEEEECCchHHhhhhhhccC-CCeeeEEEEeccCCCCCCCCcccCCcCceEEEEecCCCceeEeecCCCccccCCHHH
Confidence 6899999999999999999998 999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------eeEeCc
Q psy8744 51 --------------------------------------------------------------------------LFRTNQ 56 (116)
Q Consensus 51 --------------------------------------------------------------------------~~~p~~ 56 (116)
||+|.|
T Consensus 146 Fpd~i~a~k~~p~t~~~d~~~~wdf~s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~vn~~G~~~~VKfh~~P~~ 225 (503)
T 1gwe_A 146 FTHFIRSQKRLPDSGLRDATMQWDFWTNNPESAHQVTYLMGPRGLPRTWREMNGYGSHTYLWVNAQGEKHWVKYHFISQQ 225 (503)
T ss_dssp HHHHHHHHSBCTTTCCBCHHHHHHHHHTCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEEEECTTCCEEEEEEEEEETT
T ss_pred HHHHHHhcCCCCcCCCCCHHHHHHHHHhChhhhhHHHHhhccCCCCCCcccccccccCceEEEcCCCCEEEEEEEEEeCC
Confidence 999999
Q ss_pred cccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744 57 KIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116 (116)
Q Consensus 57 G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T 116 (116)
|+++|+++||.+++|.+|||+++||+++|++|++|+|+|+||||+++|+++++|||||+|
T Consensus 226 Gv~~L~~~ea~~~~g~d~d~~~~DL~~aI~~G~~p~w~l~VQl~~~~d~~~~~~~~~D~T 285 (503)
T 1gwe_A 226 GVHNLSNDEATKIAGENADFHRQDLFESIAKGDHPKWDLYIQAIPYEEGKTYRFNPFDLT 285 (503)
T ss_dssp CCCBCCHHHHHHHHHHCTTHHHHHHHHHHHTTCCCEEEEEEEEEETTHHHHCSSCTTCTT
T ss_pred CCCCCCHHHHHHhcCCCccHHHHHHHHHHHcCCCCeEEEEEEeeCHHHHhcCCCCCCcCc
Confidence 999999999999999999999999999999999999999999999999999999999998
No 13
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=100.00 E-value=1.6e-37 Score=269.00 Aligned_cols=116 Identities=37% Similarity=0.609 Sum_probs=114.4
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------ 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------ 50 (116)
|+|+|++++++++||+|.+|+++||+|||++|||+|+|++|+||+.||||
T Consensus 77 a~G~F~v~~d~~~~t~a~~f~~~Gk~tpv~vRFStv~g~~gs~D~~rd~RGfAvKf~t~eGn~Dlv~nN~PvFfird~~~ 156 (715)
T 1sy7_A 77 AFGKFKVYESASDLTMAPVLTDTSRETPVFVRFSTVLGSRGSADTVRDVRGFAVKFYTEEGNWDLVGNNIPVFFIQDAIK 156 (715)
T ss_dssp EEEEEEESSCCTTTCCCGGGTCSSCCEEEEEEEECSSSCTTSCTTSSSCCEEEEEEEETTEEEEEEEESSSSCSCSSGGG
T ss_pred EEEEEEECCCchHhhhchhhcCCCceEEEEEEeccCCCCCCCCcccCCcCceeEEEecCCCCcceeeeCCCccccCCHHH
Confidence 68999999999999999999999999999999999999999999999999
Q ss_pred ------------------------------------------------------------------------------ee
Q psy8744 51 ------------------------------------------------------------------------------LF 52 (116)
Q Consensus 51 ------------------------------------------------------------------------------~~ 52 (116)
||
T Consensus 157 F~~~i~a~k~~p~t~~~~~~~~~~~~~df~~~~Pes~h~~~~~~sdr~~p~s~r~m~~~g~htf~~vn~~G~~~~vk~~~ 236 (715)
T 1sy7_A 157 FPDVIHAGKPEPHNEVPQAQSAHNNFWDFQFNHTEATHMFTWAMSDRAIPRSLRMMQGFGVNTYTLINAQGKRHFVKFHW 236 (715)
T ss_dssp HHHHHHHHSCBTTTTBCTTCCCSHHHHHHHHHCGGGHHHHHHHTSGGGSBSCGGGSCEECCSCEEEECTTSCEEEEEEEE
T ss_pred HHHHHHHcCCCCccCCCCcccchhHHHHHHhhCchhHHHHHHhccCCCCCcccccccccccCCceeEcCCCcEEEEEeeE
Confidence 99
Q ss_pred EeCccccCCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744 53 RTNQKIKNLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116 (116)
Q Consensus 53 ~p~~G~~~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T 116 (116)
+|.||+++|+++||.++++++|||+++|||++|++|+||+|+|+||||+++|+.+|+|||||+|
T Consensus 237 ~p~~g~~~l~~~ea~~~~g~~~d~l~~dL~~~i~~g~~p~w~l~vQ~~~~~d~~~~~~~~~D~T 300 (715)
T 1sy7_A 237 TPELGVHSLVWDEALKLAGQDPDFHRKDLWEAIENGAYPKWKFGIQAIAEEDEHKFDFDILDAT 300 (715)
T ss_dssp EETTCCCBCCHHHHHHHHHHCTTHHHHHHHHHHHTTCCCEEEEEEEEEEGGGTTCSSSCTTCTT
T ss_pred EcCCCCcCCCHHHHHHhhCCCccHHHHHHHHHHhcCCCceEEEEEEeeChHHhccCCCCCCcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999998
No 14
>3e4w_A Putative uncharacterized protein; heme enzyme, catalase, peroxidase, oxidoreductase; HET: HEM; 1.80A {Mycobacterium avium subsp} PDB: 3e4y_A*
Probab=100.00 E-value=8.5e-34 Score=227.02 Aligned_cols=104 Identities=23% Similarity=0.355 Sum_probs=98.7
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCCCCCC------------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTARSIR------------------------------ 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~rd~R------------------------------ 50 (116)
|+|+|++++++++||+|.+|+ ||+|||++|||+|+|++|+||+.||||
T Consensus 41 a~G~F~v~~d~~~~t~a~~f~--g~~tpv~vRFSt~~g~~g~~D~~rd~RGfAvKf~t~eG~~~Dlv~nN~PvFfird~~ 118 (320)
T 3e4w_A 41 YRGTFTATRDAVMLSAAPHLD--GSTVPALIRFSNGSGNPKQRDGAPGVRGMAVKFTLPDGSTTDVSAQTARLLVSSTPE 118 (320)
T ss_dssp EEEEEEECTTGGGTCCCGGGS--SCEEEEEEEEEESSSCTTCCTTSSCCEEEEEEEECTTSCEEEEEEESCSSCSCSSHH
T ss_pred EEEEEEECCCchHHHhccccC--CceeEEEEEeccCCCCCCCCccCCCCCceEEEEEcCCCCeEeeeeccccceecCCHH
Confidence 689999999999999999997 999999999999999999999999999
Q ss_pred -----------------------------------------------------------------------eeEeCcccc
Q psy8744 51 -----------------------------------------------------------------------LFRTNQKIK 59 (116)
Q Consensus 51 -----------------------------------------------------------------------~~~p~~G~~ 59 (116)
||+|.||++
T Consensus 119 ~F~~~i~a~k~~~~d~~~~~df~~~~Pes~h~~~~l~s~rg~p~s~~~~~~~s~htf~~~n~~G~~~~vK~~~~p~~g~~ 198 (320)
T 3e4w_A 119 GFIDLLKAMRPGLTTPLRLATHLLTHPRLLGALPLLREANRIPASYATTEYHGLHAFRWIAADGSARFVRYHLVPTAAEE 198 (320)
T ss_dssp HHHHHHHHTSSSTTHHHHHHHHHHHCHHHHTTHHHHHHHTCEESCGGGSCEEEEEEEEEECTTSCEEEEEEEEEESSCCC
T ss_pred HHhHHHHhhCCCCCCHHHHHHHHHhCHhHHHHHHHHhccCCCCCCcccCCccccccEEEEcCCCCEEEEEEEEEeCCCCC
Confidence 899999999
Q ss_pred CCCHHHHHHhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744 60 NLPVKRAEDLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116 (116)
Q Consensus 60 ~lt~~ea~~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T 116 (116)
+|+++||. +.+|||+++||+++|++|++ +|+|+||||+++|+ ++|+|
T Consensus 199 ~l~~~ea~---~~~pd~l~~dL~~~i~~g~~-~w~l~vQ~~~~~d~------~~D~T 245 (320)
T 3e4w_A 199 YLSASDAR---GKDPDFLTDELAARLQDGPV-RFDFRVQIAGPTDS------TVDPS 245 (320)
T ss_dssp EECHHHHH---TSCTTHHHHHHHHHHHHSCE-EEEEEEEECCTTCC------SSCTT
T ss_pred CCCHHHhc---cCCccHHHHHHHHHHHhCCc-cEEEEEEecCCCCc------CCCCC
Confidence 99999987 57999999999999999995 99999999999874 78876
No 15
>1u5u_A Allene oxide synthase-lipoxygenase protein; catalase, heme, eicosanoid, fusion PR lyase; HET: HEM; 2.00A {Plexaura homomalla} SCOP: e.5.1.2
Probab=99.94 E-value=7.4e-28 Score=196.03 Aligned_cols=105 Identities=15% Similarity=0.270 Sum_probs=97.1
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCCC-CCCC-----------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADTA-RSIR----------------------------- 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~~-rd~R----------------------------- 50 (116)
|+|+|+++++ ++||+|.+|+ +|++|||++|||++ |+||+. ||||
T Consensus 73 a~G~F~v~~d-~~~t~a~~F~-~gk~tpv~vRFSt~----gs~D~~~rd~RGfAvKf~t~d~~g~~Dlv~nNg~~~PvFf 146 (374)
T 1u5u_A 73 GIGEITIVND-PKFPEHEFFT-AGRTFPARLRHANL----KYPDDAGADARSFSIKFADSDSDGPLDIVMNTGEANIFWN 146 (374)
T ss_dssp EEEEEEECSS-CCSCCCSSSC-TTCEEEEEEEEEBS----SCSCTTSEECBEEEEESSSSSSCCSCEEEEEESSSCSCCS
T ss_pred EEEEEEECCC-chhhcccccC-CCCeeeEEEEecCC----CCCCCCCCCCCeEEEEEEecCCCCceEEEeecCCccccee
Confidence 6899999999 9999999995 69999999999999 899998 9999
Q ss_pred ------------------------------------------------------------------eeEeC-----cccc
Q psy8744 51 ------------------------------------------------------------------LFRTN-----QKIK 59 (116)
Q Consensus 51 ------------------------------------------------------------------~~~p~-----~G~~ 59 (116)
||+|. ||++
T Consensus 147 ird~~~Fia~k~p~~~~df~~~~Pes~~~~l~s~r~~P~s~~~~~y~s~htf~~vn~~G~~~~vK~~~~P~~~~~~~g~~ 226 (374)
T 1u5u_A 147 SPSLEDFVPVEEGDAAEEYVYKNPYYYYNLVEALRRAPDTFAHLYYYSQVTMPFKAKDGKVRYCRYRALPGDVDIKEEDE 226 (374)
T ss_dssp HHHHHHHTTCCTTHHHHHHHTTCHHHHHHHHHHCEESCSCGGGCCEECCSCEEEECTTCCEEEEEEEEEESSSCCCGGGC
T ss_pred cCCHHHHHhcCChHHHHHHHhhCHHHHHHHHhCcCCCCCCcccCCccccceEEEECCCCCEEEEEEEEEeCCcccccCcc
Confidence 89999 9997
Q ss_pred --CCCHHHHH--------HhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeC--cchhccCCCCCCCCC
Q psy8744 60 --NLPVKRAE--------DLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMT--FEQAENWKWNPFDLT 116 (116)
Q Consensus 60 --~lt~~ea~--------~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~--~~d~~~~~~~~~D~T 116 (116)
+|+.+|++ ++++.+|||+++||+++|++|+ |+|+|+||||+ ++|+ +||||+|
T Consensus 227 ~~~l~~ee~~~~~~~~r~~~~~~~~d~l~~dL~~~I~~g~-~~w~l~vQl~~~~~~d~----~~~~D~T 290 (374)
T 1u5u_A 227 SGRLTEEEQRKIWIFSRHENEKRPDDYLRKEYVERLQKGP-VNYRLQIQIHEASPDDT----ATIFHAG 290 (374)
T ss_dssp TTCCCHHHHTTTTCCSCCTTCCSCTTHHHHHHHHHHHHSC-EEEEEEEEEEECCTTCC----GGGGCTT
T ss_pred cCCCCHHHHhhccccccccccCCCccHHHHHHHHHHHcCC-ceEEEEEEEecCCcccc----cCcccCc
Confidence 99999987 4778899999999999999999 99999999999 7765 6899987
No 16
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}
Probab=99.92 E-value=2.7e-26 Score=205.38 Aligned_cols=107 Identities=14% Similarity=0.243 Sum_probs=94.8
Q ss_pred CeEEEEECCCchhhhhcccCCCCCceeeeEeceecCCCCCCCCCC-CCCCC-----------------------------
Q psy8744 1 AFGYFEVTHDITQYTKAAVFSKIGKRTKIGVRFSTVGGESGSADT-ARSIR----------------------------- 50 (116)
Q Consensus 1 A~G~F~~t~d~s~~t~A~~f~~~gk~tPv~~RFS~~~g~~g~pD~-~rd~R----------------------------- 50 (116)
|+|+|++++++ ++|+|++|+. |++|||++|||+++| +|+ .||||
T Consensus 73 a~G~F~v~~d~-~~t~a~~F~~-gk~tpv~vRFStv~~----~Dd~~rd~RGfAvKf~t~e~Ggn~DlV~nN~PvFfird 146 (1066)
T 3dy5_A 73 GIGEITIVNDP-KFPEHEFFTA-GRTFPARLRHANLKY----PDDAGADARSFSIKFADSDSDGPLDIVMNTGEANIFWN 146 (1066)
T ss_dssp EEEEEEECSSC-CSCCCSSSCT-TCCEEEEEECBBSSC----SCTTSCCBBEEEEESSSSSSCCSCEEEEESSSSCSCCS
T ss_pred EEEEEEECCCH-HHHhhhhhcC-CCEEEEEEEcCCCCC----CCCCCCCCceEEEEEEeCCCCceeeeeeccCCccccCC
Confidence 68999999999 9999999997 999999999999975 565 69999
Q ss_pred ------------------------------------------------------------------eeEeC------ccc
Q psy8744 51 ------------------------------------------------------------------LFRTN------QKI 58 (116)
Q Consensus 51 ------------------------------------------------------------------~~~p~------~G~ 58 (116)
||+|. ||+
T Consensus 147 ~~~F~~fi~a~kp~~~~df~~~~Pes~~~~l~sdr~~P~s~~~m~~~s~htf~~~n~~G~~~~VKf~~~P~~~~~~~~G~ 226 (1066)
T 3dy5_A 147 SPSLEDFVPVEEGDAAEEYVYKNPYYYYNLVEALRRAPDTFAHLYYYSQVTMPFKAKDGKVRYCRYRALPGDVDIKEEDE 226 (1066)
T ss_dssp HHHHHTTTTCCTTHHHHHHHTSSHHHHHTHHHHBCSSCSCGGGCCEECCSCEEEECTTCCEEEEEEEEEECSSCCCGGGC
T ss_pred HHHHHHHHHhcCchHHHHHHhhCcHHHHHHHhccCCCCCCcccCCcccccceEEEcCCCCEEEEEEEEEECCcccccccc
Confidence 99994 789
Q ss_pred c-CCCHHHHH--------HhhCCCCCcchhhHHHHHHCCCCCeEEEEEEeeCcchhccCCCCCCCCC
Q psy8744 59 K-NLPVKRAE--------DLAGSDPDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQAENWKWNPFDLT 116 (116)
Q Consensus 59 ~-~lt~~ea~--------~~~~~~pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d~~~~~~~~~D~T 116 (116)
+ +|+++||+ ++++.+|||+++||+++|++|+ |+|+|+||||++++.+ .+||||+|
T Consensus 227 ~~~l~~ee~~~~~~~~r~~~~~~~pd~l~~dL~~~i~~g~-p~w~l~vQl~~~~~~d--~~d~~D~T 290 (1066)
T 3dy5_A 227 SGRLTEEEQRKIWIFSRHENEKRPDDYLRKEYVERLQKGP-VNYRLQIQIHEASPDD--TATIFHAG 290 (1066)
T ss_dssp TTCCCHHHHHTCSCCSCCSSCCCCTTTTTTTTTTTTTSSC-EEEEEEEEEEECCTTC--CGGGGCTT
T ss_pred ccCCCHHHHhhccccccccccCCCccHHHHHHHHHHHcCC-ceEEEEEEEecCCcCC--CCCCCCCC
Confidence 9 89999986 5778999999999999999999 9999999999733332 57899987
No 17
>2guj_A Phage-like element PBSX protein XKDM; X-RAY, SR353, structural genomics, PSI, protein structure initiative; 3.00A {Bacillus subtilis} SCOP: b.106.1.3
Probab=52.12 E-value=15 Score=25.93 Aligned_cols=31 Identities=10% Similarity=0.105 Sum_probs=26.4
Q ss_pred CCcchhhHHHHHHCCCCCeEEEEEEeeCcch
Q psy8744 74 PDYSIRDLYNSIAAGKYPSYTFYIQVMTFEQ 104 (116)
Q Consensus 74 pdf~~~dL~~~I~~g~~p~w~l~vQv~~~~d 104 (116)
-+-..+-|.+.|++|..|.|++.+.+.+|+.
T Consensus 67 tS~~~~~l~~~ik~G~~~~f~i~~~l~DP~s 97 (155)
T 2guj_A 67 TSKFVLLMMDYVKKGSDPYFTLQAVLDDQSS 97 (155)
T ss_dssp CHHHHHHHHHHHHTTCCCCEEEEEEECCTTC
T ss_pred CHHHHHHHHHHHhcCCCceEEEEEEeCCCCC
Confidence 3445677889999999999999999999976
No 18
>1gxi_E Photosystem I reaction center subunit IV; photosynthesis, PSAE SUB-UNIT, thylakoid; NMR {Synechocystis SP} SCOP: b.34.4.2 PDB: 1pse_A 1psf_A
Probab=22.84 E-value=31 Score=21.54 Aligned_cols=14 Identities=36% Similarity=0.420 Sum_probs=11.9
Q ss_pred CceeeeEeceecCC
Q psy8744 24 GKRTKIGVRFSTVG 37 (116)
Q Consensus 24 gk~tPv~~RFS~~~ 37 (116)
|-+.||+|||--|-
T Consensus 31 gi~YPVvVRF~kVN 44 (73)
T 1gxi_E 31 GILYPVIVRFDRVN 44 (73)
T ss_dssp CSSSCEEECCSCSC
T ss_pred CCEeeEEEEEEeec
Confidence 77899999998763
No 19
>1nkz_B Light-harvesting protein B-800/850, beta chain; light harvesting complex II, trans-membrane helices, rhodopi glucoside; HET: CXM RG1 BOG BCL; 2.00A {Rhodoblastus acidophilus} SCOP: f.3.1.1 PDB: 1kzu_B* 2fkw_B* 1ijd_B*
Probab=22.35 E-value=44 Score=18.61 Aligned_cols=10 Identities=30% Similarity=0.627 Sum_probs=8.5
Q ss_pred CCCHHHHHHh
Q psy8744 60 NLPVKRAEDL 69 (116)
Q Consensus 60 ~lt~~ea~~~ 69 (116)
.||++||+++
T Consensus 2 gLT~~EA~Ef 11 (41)
T 1nkz_B 2 TLTAEQSEEL 11 (41)
T ss_dssp CCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 5899999886
No 20
>1jb0_E Photosystem 1 reaction centre subunit IV; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: b.34.4.2 PDB: 3pcq_E*
Probab=20.43 E-value=35 Score=21.44 Aligned_cols=15 Identities=33% Similarity=0.459 Sum_probs=12.2
Q ss_pred CCceeeeEeceecCC
Q psy8744 23 IGKRTKIGVRFSTVG 37 (116)
Q Consensus 23 ~gk~tPv~~RFS~~~ 37 (116)
.|-+.||+|||--|-
T Consensus 30 ~gi~YPV~VRFdkVN 44 (75)
T 1jb0_E 30 PGVKYPVIVRFDKVN 44 (75)
T ss_dssp TTCSCCEEEECSSCC
T ss_pred CCccccEEEEEeeec
Confidence 367899999998764
Done!