Query psy8745
Match_columns 317
No_of_seqs 289 out of 1678
Neff 6.3
Searched_HMMs 46136
Date Fri Aug 16 18:07:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8745.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8745hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4720|consensus 100.0 2.6E-46 5.7E-51 349.1 16.1 171 12-183 217-387 (391)
2 PLN02421 phosphotransferase, a 100.0 3.5E-38 7.5E-43 303.0 17.7 163 23-186 161-323 (330)
3 PTZ00296 choline kinase; Provi 100.0 1.6E-36 3.5E-41 302.2 18.4 159 22-182 256-433 (442)
4 PLN02236 choline kinase 100.0 2E-35 4.3E-40 285.5 18.8 160 22-182 178-343 (344)
5 KOG2686|consensus 100.0 7.9E-35 1.7E-39 279.1 16.4 159 22-180 190-359 (366)
6 PTZ00384 choline kinase; Provi 100.0 1.8E-32 4E-37 268.6 18.8 158 22-181 198-376 (383)
7 cd05156 ChoK_euk Choline Kinas 99.9 2.1E-26 4.6E-31 216.6 12.9 112 41-152 176-302 (302)
8 KOG4720|consensus 99.9 1.5E-23 3.2E-28 196.7 5.1 95 186-281 130-226 (391)
9 COG0510 ycfN Thiamine kinase a 99.8 2.7E-18 5.8E-23 161.4 14.5 133 22-180 130-263 (269)
10 PF01633 Choline_kinase: Choli 99.8 1.2E-19 2.6E-24 162.9 5.0 84 22-105 121-211 (211)
11 TIGR02721 ycfN_thiK thiamine k 99.8 1.1E-17 2.3E-22 154.3 13.3 111 41-171 143-253 (256)
12 cd05157 ETNK_euk Ethanolamine 99.7 5E-18 1.1E-22 153.7 9.3 88 22-110 148-235 (235)
13 KOG2686|consensus 99.7 5.1E-19 1.1E-23 170.4 2.8 84 183-266 91-176 (366)
14 PRK10271 thiK thiamine kinase; 99.6 6E-15 1.3E-19 131.9 10.8 117 30-168 63-179 (188)
15 PTZ00296 choline kinase; Provi 99.4 9.9E-14 2.1E-18 138.8 4.8 80 186-265 161-247 (442)
16 PTZ00384 choline kinase; Provi 99.4 8.9E-14 1.9E-18 136.8 4.0 78 186-263 104-187 (383)
17 cd05153 HomoserineK_II Homoser 99.4 4E-12 8.7E-17 119.0 13.3 101 40-152 171-271 (296)
18 PF01633 Choline_kinase: Choli 99.4 2.5E-13 5.4E-18 121.9 4.1 73 186-258 25-99 (211)
19 PLN02421 phosphotransferase, a 99.4 5.9E-13 1.3E-17 128.2 6.2 89 186-274 65-155 (330)
20 PLN02236 choline kinase 99.3 8.5E-13 1.8E-17 127.9 5.4 81 186-266 88-169 (344)
21 TIGR02906 spore_CotS spore coa 99.3 1.3E-10 2.8E-15 109.2 15.2 100 41-154 184-283 (313)
22 TIGR02904 spore_ysxE spore coa 99.3 3.7E-11 8.1E-16 114.1 11.5 101 40-154 192-292 (309)
23 cd05151 ChoK Choline Kinase (C 99.2 5.4E-11 1.2E-15 101.5 10.0 62 43-116 106-167 (170)
24 PRK05231 homoserine kinase; Pr 99.2 1.6E-10 3.4E-15 109.7 13.4 101 26-135 166-270 (319)
25 TIGR02172 Fb_sc_TIGR02172 Fibr 99.2 5.7E-11 1.2E-15 108.8 8.4 71 34-116 143-213 (226)
26 TIGR00938 thrB_alt homoserine 99.1 3.8E-10 8.2E-15 106.9 12.2 86 41-134 184-269 (307)
27 cd05154 ACAD10_11_like Acyl-Co 99.1 2.9E-10 6.2E-15 100.4 7.3 61 28-89 159-220 (223)
28 PF01636 APH: Phosphotransfera 99.0 6.2E-10 1.3E-14 98.4 8.4 75 30-117 153-227 (239)
29 cd05150 APH Aminoglycoside 3'- 99.0 1E-09 2.2E-14 100.1 8.8 65 41-113 160-224 (244)
30 smart00587 CHK ZnF_C4 abd HLH 99.0 2.2E-09 4.9E-14 95.9 9.9 65 42-117 118-186 (196)
31 cd05157 ETNK_euk Ethanolamine 98.9 1.6E-09 3.5E-14 98.0 6.2 82 186-267 47-135 (235)
32 COG2334 Putative homoserine ki 98.9 3.3E-08 7.2E-13 95.8 15.3 105 46-163 199-303 (331)
33 PRK09550 mtnK methylthioribose 98.9 1E-08 2.2E-13 101.7 9.7 61 26-90 207-267 (401)
34 cd05156 ChoK_euk Choline Kinas 98.9 2.7E-09 5.8E-14 100.5 5.3 81 186-266 52-138 (302)
35 cd05155 APH_ChoK_like_1 Unchar 98.8 1.5E-08 3.3E-13 92.3 8.4 59 42-114 162-221 (235)
36 cd05152 MPH2' Macrolide 2'-Pho 98.8 6.8E-08 1.5E-12 91.1 12.0 63 41-116 182-245 (276)
37 PRK11768 serine/threonine prot 98.8 7.8E-08 1.7E-12 92.5 12.3 119 41-178 193-316 (325)
38 PRK12396 5-methylribose kinase 98.7 4.6E-08 1E-12 96.8 9.5 62 25-90 210-271 (409)
39 PF02958 EcKinase: Ecdysteroid 98.7 4.2E-08 9.1E-13 92.0 8.6 68 39-117 210-281 (294)
40 TIGR01767 MTRK 5-methylthiorib 98.7 8.8E-08 1.9E-12 93.8 9.7 46 42-89 190-235 (370)
41 PLN02876 acyl-CoA dehydrogenas 98.6 4.3E-07 9.3E-12 97.6 12.3 114 25-149 203-333 (822)
42 PRK06149 hypothetical protein; 98.6 1E-06 2.2E-11 96.4 15.1 178 41-241 205-406 (972)
43 TIGR02721 ycfN_thiK thiamine k 98.5 1.6E-07 3.5E-12 86.5 7.1 79 186-264 43-121 (256)
44 PRK06148 hypothetical protein; 98.5 8E-07 1.7E-11 97.5 13.4 129 41-186 200-330 (1013)
45 cd05120 APH_ChoK_like Aminogly 98.4 8.3E-07 1.8E-11 72.2 7.7 45 44-89 108-152 (155)
46 PLN02756 S-methyl-5-thioribose 98.4 1.3E-06 2.8E-11 87.0 9.3 60 25-88 213-272 (418)
47 PF07914 DUF1679: Protein of u 98.4 2.8E-06 6.1E-11 84.7 11.6 82 41-133 265-361 (414)
48 PRK10593 hypothetical protein; 98.4 1.4E-06 3E-11 82.9 8.5 70 33-117 182-252 (297)
49 COG3173 Predicted aminoglycosi 98.2 3.8E-06 8.2E-11 81.2 8.2 61 25-86 179-239 (321)
50 TIGR02905 spore_yutH spore coa 98.2 6.4E-06 1.4E-10 78.9 9.1 96 42-154 187-283 (313)
51 COG3178 Predicted phosphotrans 97.8 0.00014 2.9E-09 69.7 10.3 106 41-157 197-308 (351)
52 COG4857 Predicted kinase [Gene 97.8 9.3E-05 2E-09 70.5 8.0 59 26-88 212-270 (408)
53 PRK14879 serine/threonine prot 97.7 0.00013 2.9E-09 64.4 7.8 83 44-134 114-198 (211)
54 TIGR03724 arch_bud32 Kae1-asso 97.7 0.0001 2.2E-09 64.6 6.6 41 44-86 109-149 (199)
55 PF06293 Kdo: Lipopolysacchari 97.4 0.00047 1E-08 62.0 7.7 64 43-113 136-206 (206)
56 PF03881 Fructosamin_kin: Fruc 97.4 0.00031 6.8E-09 67.0 6.1 75 28-118 172-246 (288)
57 cd05151 ChoK Choline Kinase (C 97.3 0.00036 7.9E-09 59.1 5.1 59 186-244 44-104 (170)
58 COG3642 Mn2+-dependent serine/ 97.1 0.003 6.5E-08 57.0 8.8 68 43-118 110-181 (204)
59 PF04655 APH_6_hur: Aminoglyco 97.1 0.004 8.7E-08 58.4 10.2 53 35-89 151-203 (253)
60 PRK09605 bifunctional UGMP fam 96.9 0.0013 2.9E-08 67.3 5.4 41 44-86 447-487 (535)
61 TIGR02172 Fb_sc_TIGR02172 Fibr 96.7 0.0016 3.5E-08 59.6 4.3 78 186-263 44-132 (226)
62 PRK15123 lipopolysaccharide co 96.7 0.0083 1.8E-07 56.6 9.0 66 43-115 156-233 (268)
63 PRK01723 3-deoxy-D-manno-octul 96.6 0.012 2.6E-07 54.3 9.0 34 44-78 161-194 (239)
64 PRK12274 serine/threonine prot 96.6 0.0063 1.4E-07 55.9 7.0 35 43-78 109-144 (218)
65 cd05145 RIO1_like RIO kinase f 96.4 0.0042 9E-08 54.8 4.2 31 44-76 137-167 (190)
66 PRK09902 hypothetical protein; 96.3 0.016 3.5E-07 53.1 7.9 63 43-115 146-215 (216)
67 COG3570 StrB Streptomycin 6-ki 96.3 0.015 3.3E-07 53.5 7.4 47 40-88 157-203 (274)
68 cd05147 RIO1_euk RIO kinase fa 96.1 0.0048 1E-07 54.8 3.2 29 44-74 137-165 (190)
69 cd05119 RIO RIO kinase family, 96.0 0.007 1.5E-07 52.3 3.6 29 44-74 134-162 (187)
70 cd05150 APH Aminoglycoside 3'- 95.8 0.0098 2.1E-07 54.1 4.0 60 186-245 43-108 (244)
71 COG3001 Uncharacterized protei 95.7 0.028 6.1E-07 52.6 6.7 81 17-118 164-244 (286)
72 cd05144 RIO2_C RIO kinase fami 95.7 0.017 3.6E-07 51.0 5.0 30 44-74 144-173 (198)
73 smart00090 RIO RIO-like kinase 95.7 0.02 4.3E-07 52.8 5.7 28 46-75 170-197 (237)
74 PF01163 RIO1: RIO1 family; I 95.6 0.02 4.3E-07 51.3 5.0 29 44-74 126-154 (188)
75 KOG0668|consensus 95.3 0.011 2.4E-07 55.2 2.4 41 42-82 149-189 (338)
76 cd05154 ACAD10_11_like Acyl-Co 95.2 0.04 8.7E-07 48.2 5.8 79 187-265 48-149 (223)
77 cd05146 RIO3_euk RIO kinase fa 95.1 0.015 3.3E-07 52.5 2.8 28 44-73 144-171 (197)
78 PRK10359 lipopolysaccharide co 94.9 0.019 4E-07 53.3 2.7 38 43-82 153-192 (232)
79 cd00180 PKc Catalytic domain o 94.8 0.033 7.2E-07 46.7 3.9 57 23-80 91-147 (215)
80 PF06176 WaaY: Lipopolysacchar 94.7 0.045 9.8E-07 50.7 4.8 30 44-75 154-183 (229)
81 cd05594 STKc_PKB_alpha Catalyt 94.7 0.046 1E-06 51.5 4.9 30 44-74 115-144 (325)
82 COG3231 Aph Aminoglycoside pho 94.6 0.14 3E-06 47.8 7.4 64 42-114 183-247 (266)
83 TIGR01982 UbiB 2-polyprenylphe 94.5 0.025 5.4E-07 56.9 2.8 34 44-78 276-309 (437)
84 cd06605 PKc_MAPKK Catalytic do 94.3 0.051 1.1E-06 48.8 4.1 51 23-74 99-149 (265)
85 KOG0583|consensus 94.2 0.025 5.4E-07 55.8 1.9 35 43-77 138-172 (370)
86 COG2187 Uncharacterized protei 94.1 0.46 1E-05 45.7 10.1 115 41-180 206-331 (337)
87 PF00069 Pkinase: Protein kina 94.1 0.026 5.6E-07 50.4 1.7 30 45-75 118-147 (260)
88 KOG0983|consensus 94.0 0.06 1.3E-06 51.6 4.0 60 12-74 181-240 (391)
89 KOG0984|consensus 93.8 0.044 9.5E-07 50.6 2.5 44 31-75 155-198 (282)
90 cd05122 PKc_STE Catalytic doma 93.7 0.092 2E-06 46.0 4.5 53 23-77 97-149 (253)
91 KOG0667|consensus 93.6 0.073 1.6E-06 55.3 4.1 36 43-78 307-343 (586)
92 KOG0658|consensus 93.6 0.042 9E-07 53.8 2.1 31 44-74 144-174 (364)
93 cd08528 STKc_Nek10 Catalytic d 93.5 0.1 2.3E-06 47.1 4.7 32 43-75 132-163 (269)
94 COG0478 RIO-like serine/threon 93.5 0.1 2.2E-06 49.9 4.5 29 43-72 220-248 (304)
95 cd08223 STKc_Nek4 Catalytic do 93.4 0.11 2.3E-06 46.4 4.5 31 44-75 121-151 (257)
96 cd08215 STKc_Nek Catalytic dom 93.4 0.082 1.8E-06 46.7 3.6 32 44-76 122-153 (258)
97 cd05604 STKc_SGK3 Catalytic do 93.4 0.089 1.9E-06 49.6 4.0 31 44-75 115-145 (325)
98 cd05069 PTKc_Yes Catalytic dom 93.3 0.094 2E-06 47.3 4.0 31 44-75 121-151 (260)
99 KOG0599|consensus 93.3 0.076 1.7E-06 50.8 3.4 41 44-85 142-182 (411)
100 cd05068 PTKc_Frk_like Catalyti 93.2 0.095 2.1E-06 47.2 3.9 32 44-76 122-153 (261)
101 cd06649 PKc_MEK2 Catalytic dom 93.2 0.11 2.4E-06 49.2 4.5 29 45-74 124-152 (331)
102 KOG0603|consensus 93.2 0.1 2.3E-06 54.2 4.5 36 44-79 434-469 (612)
103 smart00219 TyrKc Tyrosine kina 93.2 0.13 2.9E-06 45.6 4.7 32 44-76 122-153 (258)
104 cd08217 STKc_Nek2 Catalytic do 93.2 0.1 2.2E-06 46.4 3.9 33 43-76 128-160 (265)
105 cd05614 STKc_MSK2_N N-terminal 93.2 0.1 2.2E-06 49.2 4.1 30 44-74 124-153 (332)
106 cd05573 STKc_ROCK_NDR_like Cat 93.2 0.072 1.5E-06 50.4 3.1 31 44-75 120-150 (350)
107 cd06622 PKc_MAPKK_PBS2_like Ca 93.1 0.1 2.2E-06 47.7 3.9 30 44-74 122-151 (286)
108 KOG0594|consensus 93.1 0.055 1.2E-06 52.5 2.2 32 42-74 137-168 (323)
109 cd07863 STKc_CDK4 Catalytic do 93.1 0.081 1.8E-06 48.3 3.2 31 44-75 127-157 (288)
110 cd05586 STKc_Sck1_like Catalyt 93.1 0.099 2.1E-06 49.3 3.9 31 44-75 115-145 (330)
111 PRK09188 serine/threonine prot 93.0 0.066 1.4E-06 52.8 2.7 35 44-79 130-165 (365)
112 cd05585 STKc_YPK1_like Catalyt 93.0 0.11 2.4E-06 48.6 4.1 31 44-75 112-142 (312)
113 cd06616 PKc_MKK4 Catalytic dom 93.0 0.096 2.1E-06 47.9 3.5 30 44-74 127-156 (288)
114 cd00192 PTKc Catalytic domain 92.9 0.12 2.6E-06 45.8 4.0 33 44-77 124-156 (262)
115 cd05603 STKc_SGK2 Catalytic do 92.9 0.11 2.5E-06 48.7 4.0 31 44-75 115-145 (321)
116 cd05082 PTKc_Csk Catalytic dom 92.9 0.13 2.7E-06 46.2 4.1 31 44-75 121-151 (256)
117 cd06650 PKc_MEK1 Catalytic dom 92.8 0.13 2.9E-06 48.8 4.4 29 45-74 124-152 (333)
118 cd05571 STKc_PKB Catalytic dom 92.8 0.12 2.7E-06 48.7 4.1 31 44-75 114-144 (323)
119 PHA02882 putative serine/threo 92.8 0.064 1.4E-06 49.8 2.2 30 44-74 145-174 (294)
120 cd05627 STKc_NDR2 Catalytic do 92.8 0.055 1.2E-06 51.9 1.7 30 44-74 120-149 (360)
121 PTZ00263 protein kinase A cata 92.8 0.12 2.5E-06 49.0 3.9 31 44-75 137-167 (329)
122 cd05601 STKc_CRIK Catalytic do 92.7 0.058 1.3E-06 50.8 1.8 30 44-74 121-150 (330)
123 PRK10345 hypothetical protein; 92.7 0.23 5E-06 45.1 5.6 45 26-74 110-157 (210)
124 cd05602 STKc_SGK1 Catalytic do 92.7 0.11 2.4E-06 49.0 3.6 30 44-74 115-144 (325)
125 cd05621 STKc_ROCK2 Catalytic d 92.7 0.059 1.3E-06 52.3 1.8 31 44-75 161-191 (370)
126 cd06617 PKc_MKK3_6 Catalytic d 92.7 0.14 3E-06 46.6 4.1 31 44-75 123-153 (283)
127 cd05591 STKc_nPKC_epsilon Cata 92.6 0.13 2.8E-06 48.4 4.0 30 44-74 115-144 (321)
128 cd05083 PTKc_Chk Catalytic dom 92.6 0.064 1.4E-06 48.1 1.8 32 44-76 119-150 (254)
129 cd05628 STKc_NDR1 Catalytic do 92.5 0.064 1.4E-06 51.6 1.8 31 44-75 120-150 (363)
130 cd05624 STKc_MRCK_beta Catalyt 92.5 0.12 2.6E-06 49.0 3.7 30 44-74 121-150 (331)
131 cd05584 STKc_p70S6K Catalytic 92.5 0.13 2.9E-06 48.4 3.9 30 44-74 119-148 (323)
132 cd05070 PTKc_Fyn_Yrk Catalytic 92.5 0.12 2.7E-06 46.4 3.5 31 44-75 121-151 (260)
133 cd05575 STKc_SGK Catalytic dom 92.5 0.14 3E-06 48.2 4.0 30 44-74 115-144 (323)
134 PTZ00036 glycogen synthase kin 92.5 0.15 3.1E-06 51.0 4.3 31 44-74 189-219 (440)
135 cd06618 PKc_MKK7 Catalytic dom 92.4 0.12 2.6E-06 47.7 3.4 29 45-74 135-163 (296)
136 PLN00034 mitogen-activated pro 92.4 0.14 3E-06 49.0 4.0 31 44-75 187-217 (353)
137 cd05052 PTKc_Abl Catalytic dom 92.4 0.16 3.4E-06 45.9 4.1 31 44-75 123-153 (263)
138 cd05587 STKc_cPKC Catalytic do 92.4 0.15 3.1E-06 48.1 4.0 30 44-74 120-149 (324)
139 cd05598 STKc_LATS Catalytic do 92.4 0.14 3E-06 49.3 4.0 30 44-74 120-149 (376)
140 cd05590 STKc_nPKC_eta Catalyti 92.4 0.15 3.2E-06 48.2 4.0 31 44-75 115-145 (320)
141 cd05574 STKc_phototropin_like 92.3 0.17 3.8E-06 47.0 4.3 33 44-77 122-154 (316)
142 PTZ00267 NIMA-related protein 92.2 0.19 4.1E-06 50.7 4.8 31 44-75 188-218 (478)
143 cd07871 STKc_PCTAIRE3 Catalyti 92.2 0.1 2.2E-06 48.2 2.6 30 44-74 122-151 (288)
144 cd05153 HomoserineK_II Homoser 92.2 0.098 2.1E-06 48.8 2.6 34 208-244 91-124 (296)
145 cd07862 STKc_CDK6 Catalytic do 92.2 0.14 3.1E-06 46.8 3.6 31 44-75 129-159 (290)
146 PTZ00426 cAMP-dependent protei 92.2 0.15 3.2E-06 48.9 3.9 31 44-75 150-180 (340)
147 cd05600 STKc_Sid2p_Dbf2p Catal 92.1 0.14 3.1E-06 48.3 3.6 32 44-76 120-151 (333)
148 cd05597 STKc_DMPK_like Catalyt 92.1 0.17 3.8E-06 47.9 4.2 30 44-74 121-150 (331)
149 cd05593 STKc_PKB_gamma Catalyt 92.1 0.16 3.5E-06 48.2 3.9 31 44-75 114-144 (328)
150 cd05595 STKc_PKB_beta Catalyti 92.1 0.14 3E-06 48.4 3.5 30 44-74 114-143 (323)
151 cd05053 PTKc_FGFR Catalytic do 92.1 0.14 2.9E-06 47.0 3.3 31 44-75 151-181 (293)
152 cd05616 STKc_cPKC_beta Catalyt 92.1 0.15 3.3E-06 47.9 3.8 30 44-74 120-149 (323)
153 cd05629 STKc_NDR_like_fungal C 92.1 0.17 3.8E-06 48.7 4.2 30 44-74 120-149 (377)
154 cd05625 STKc_LATS1 Catalytic d 92.0 0.17 3.6E-06 49.0 4.0 30 44-74 120-149 (382)
155 PLN03225 Serine/threonine-prot 92.0 0.087 1.9E-06 54.8 2.2 31 44-74 274-304 (566)
156 cd05620 STKc_nPKC_delta Cataly 92.0 0.15 3.3E-06 48.0 3.6 30 44-74 115-144 (316)
157 KOG4250|consensus 92.0 0.18 3.9E-06 53.3 4.4 32 43-74 138-172 (732)
158 cd05623 STKc_MRCK_alpha Cataly 92.0 0.18 3.9E-06 47.7 4.2 30 44-74 121-150 (332)
159 cd05096 PTKc_DDR1 Catalytic do 92.0 0.17 3.7E-06 46.9 3.9 29 45-74 158-186 (304)
160 cd05071 PTKc_Src Catalytic dom 92.0 0.16 3.5E-06 46.0 3.6 31 44-75 121-151 (262)
161 cd06623 PKc_MAPKK_plant_like C 92.0 0.17 3.6E-06 45.2 3.7 52 23-75 98-149 (264)
162 cd07859 STKc_TDY_MAPK_plant Ca 91.9 0.15 3.3E-06 47.7 3.5 30 44-74 122-151 (338)
163 cd05039 PTKc_Csk_like Catalyti 91.9 0.091 2E-06 47.1 1.9 33 43-76 120-152 (256)
164 cd06627 STKc_Cdc7_like Catalyt 91.9 0.18 3.9E-06 44.6 3.8 52 23-76 98-149 (254)
165 cd05612 STKc_PRKX_like Catalyt 91.9 0.087 1.9E-06 48.8 1.8 30 44-74 120-149 (291)
166 cd05108 PTKc_EGFR Catalytic do 91.9 0.21 4.7E-06 46.6 4.4 31 44-75 128-158 (316)
167 KOG0608|consensus 91.8 0.19 4E-06 53.1 4.1 32 42-74 746-777 (1034)
168 PRK04750 ubiB putative ubiquin 91.8 0.1 2.2E-06 54.1 2.3 36 43-79 278-317 (537)
169 cd05582 STKc_RSK_N N-terminal 91.8 0.19 4.2E-06 47.1 4.0 31 44-75 117-147 (318)
170 cd05038 PTKc_Jak_rpt2 Catalyti 91.7 0.18 3.9E-06 45.6 3.6 33 44-77 128-160 (284)
171 PHA03212 serine/threonine kina 91.7 0.19 4.2E-06 49.3 4.1 30 44-74 201-230 (391)
172 cd05618 STKc_aPKC_iota Catalyt 91.7 0.2 4.3E-06 47.6 4.1 31 44-75 115-145 (329)
173 cd07869 STKc_PFTAIRE1 Catalyti 91.7 0.073 1.6E-06 49.4 1.1 30 44-74 122-151 (303)
174 cd07834 STKc_MAPK Catalytic do 91.7 0.18 3.8E-06 47.3 3.6 34 44-78 122-155 (330)
175 cd05617 STKc_aPKC_zeta Catalyt 91.7 0.19 4.1E-06 47.6 3.9 30 44-74 115-144 (327)
176 cd05084 PTKc_Fes Catalytic dom 91.7 0.096 2.1E-06 46.8 1.8 31 44-75 113-143 (252)
177 cd05060 PTKc_Syk_like Catalyti 91.6 0.24 5.1E-06 44.5 4.3 31 44-75 114-144 (257)
178 cd07872 STKc_PCTAIRE2 Catalyti 91.6 0.078 1.7E-06 49.4 1.2 31 44-75 123-153 (309)
179 KOG0592|consensus 91.6 0.22 4.8E-06 51.3 4.4 36 43-79 192-227 (604)
180 cd05040 PTKc_Ack_like Catalyti 91.5 0.2 4.4E-06 44.7 3.7 31 44-75 116-146 (257)
181 cd05034 PTKc_Src_like Catalyti 91.5 0.19 4.2E-06 45.0 3.6 31 44-75 122-152 (261)
182 cd05041 PTKc_Fes_like Catalyti 91.5 0.24 5.3E-06 44.1 4.2 31 44-75 112-142 (251)
183 cd06615 PKc_MEK Catalytic doma 91.5 0.21 4.6E-06 46.6 3.9 30 44-74 119-148 (308)
184 cd05599 STKc_NDR_like Catalyti 91.5 0.2 4.4E-06 47.8 3.9 31 44-75 120-150 (364)
185 cd05592 STKc_nPKC_theta_delta 91.5 0.091 2E-06 49.5 1.5 31 44-75 115-145 (316)
186 cd06656 STKc_PAK3 Catalytic do 91.5 0.074 1.6E-06 49.4 0.8 31 44-75 134-164 (297)
187 cd05091 PTKc_Ror2 Catalytic do 91.5 0.17 3.8E-06 46.1 3.3 31 44-75 143-173 (283)
188 PHA03209 serine/threonine kina 91.4 0.21 4.6E-06 48.0 4.0 31 44-75 176-206 (357)
189 KOG3087|consensus 91.4 0.33 7.2E-06 44.2 4.9 34 43-76 131-166 (229)
190 cd05580 STKc_PKA Catalytic dom 91.4 0.19 4.1E-06 46.3 3.5 31 44-75 120-150 (290)
191 cd07875 STKc_JNK1 Catalytic do 91.4 0.099 2.2E-06 50.1 1.7 31 44-75 145-175 (364)
192 cd05622 STKc_ROCK1 Catalytic d 91.4 0.11 2.5E-06 50.3 2.1 31 44-75 161-191 (371)
193 cd07878 STKc_p38beta_MAPK11 Ca 91.4 0.11 2.4E-06 49.2 2.0 31 44-75 137-167 (343)
194 cd05054 PTKc_VEGFR Catalytic d 91.3 0.24 5.3E-06 47.2 4.2 30 44-74 192-221 (337)
195 cd05102 PTKc_VEGFR3 Catalytic 91.3 0.14 3.1E-06 48.3 2.6 30 44-74 193-222 (338)
196 cd05631 STKc_GRK4 Catalytic do 91.3 0.11 2.4E-06 47.8 1.8 31 44-75 121-151 (285)
197 cd07868 STKc_CDK8 Catalytic do 91.3 0.19 4.2E-06 46.7 3.5 31 44-74 127-160 (317)
198 cd05626 STKc_LATS2 Catalytic d 91.3 0.22 4.7E-06 48.3 3.9 30 44-74 120-149 (381)
199 cd07876 STKc_JNK2 Catalytic do 91.3 0.088 1.9E-06 50.4 1.2 31 44-75 142-172 (359)
200 cd07832 STKc_CCRK Catalytic do 91.3 0.2 4.3E-06 45.5 3.5 32 44-76 118-149 (286)
201 KOG0588|consensus 91.3 0.12 2.6E-06 54.4 2.2 49 30-79 115-165 (786)
202 cd05109 PTKc_HER2 Catalytic do 91.3 0.12 2.6E-06 47.2 2.0 31 44-75 128-158 (279)
203 cd05062 PTKc_IGF-1R Catalytic 91.2 0.23 5.1E-06 45.1 3.9 31 44-75 138-168 (277)
204 cd05088 PTKc_Tie2 Catalytic do 91.2 0.19 4.1E-06 46.8 3.4 31 43-74 142-172 (303)
205 cd05085 PTKc_Fer Catalytic dom 91.2 0.13 2.7E-06 45.9 2.0 31 44-75 112-142 (250)
206 cd07853 STKc_NLK Catalytic dom 91.2 0.24 5.1E-06 47.7 4.0 31 44-75 122-152 (372)
207 cd05613 STKc_MSK1_N N-terminal 91.1 0.26 5.6E-06 45.2 4.1 31 44-75 124-154 (290)
208 cd07874 STKc_JNK3 Catalytic do 91.1 0.11 2.3E-06 49.7 1.5 31 44-75 138-168 (355)
209 cd05632 STKc_GRK5 Catalytic do 91.1 0.21 4.4E-06 46.1 3.4 31 44-75 121-151 (285)
210 smart00220 S_TKc Serine/Threon 91.1 0.18 3.9E-06 43.7 2.9 35 44-79 106-140 (244)
211 cd05113 PTKc_Btk_Bmx Catalytic 91.1 0.25 5.4E-06 44.6 3.8 31 44-75 119-149 (256)
212 cd05075 PTKc_Axl Catalytic dom 91.0 0.11 2.4E-06 46.9 1.5 31 44-75 131-161 (272)
213 cd05118 STKc_CMGC Catalytic do 91.0 0.29 6.3E-06 44.2 4.3 33 44-77 117-149 (283)
214 cd05148 PTKc_Srm_Brk Catalytic 91.0 0.23 5.1E-06 44.5 3.6 31 44-75 123-153 (261)
215 cd05080 PTKc_Tyk2_rpt2 Catalyt 91.0 0.15 3.3E-06 46.6 2.4 32 44-76 126-157 (283)
216 cd05094 PTKc_TrkC Catalytic do 91.0 0.25 5.4E-06 45.5 3.9 32 43-75 141-172 (291)
217 COG0661 AarF Predicted unusual 91.0 0.16 3.5E-06 52.4 2.8 33 43-76 283-315 (517)
218 cd05578 STKc_Yank1 Catalytic d 91.0 0.23 4.9E-06 44.6 3.5 32 44-76 119-150 (258)
219 cd05089 PTKc_Tie1 Catalytic do 91.0 0.23 4.9E-06 46.0 3.6 30 44-74 138-167 (297)
220 cd05155 APH_ChoK_like_1 Unchar 90.9 0.36 7.8E-06 43.7 4.8 39 207-245 70-109 (235)
221 cd05583 STKc_MSK_N N-terminal 90.9 0.2 4.3E-06 45.9 3.1 31 44-75 124-154 (288)
222 cd08219 STKc_Nek3 Catalytic do 90.9 0.29 6.3E-06 43.8 4.1 31 43-74 118-148 (255)
223 cd06644 STKc_STK10_LOK Catalyt 90.9 0.34 7.3E-06 44.5 4.6 31 43-74 128-158 (292)
224 cd05066 PTKc_EphR_A Catalytic 90.9 0.24 5.2E-06 44.8 3.5 31 44-75 125-155 (267)
225 cd07866 STKc_BUR1 Catalytic do 90.8 0.19 4E-06 46.2 2.9 31 44-75 134-164 (311)
226 cd05093 PTKc_TrkB Catalytic do 90.8 0.28 6.1E-06 45.0 4.1 31 44-75 139-169 (288)
227 TIGR02457 TreS_Cterm trehalose 90.8 0.36 7.9E-06 49.9 5.2 44 45-90 380-432 (528)
228 cd05037 PTK_Jak_rpt1 Pseudokin 90.8 0.32 6.8E-06 43.4 4.3 32 44-75 120-157 (259)
229 cd05042 PTKc_Aatyk Catalytic d 90.8 0.13 2.9E-06 46.5 1.8 30 44-74 119-148 (269)
230 cd05047 PTKc_Tie Catalytic dom 90.8 0.29 6.3E-06 44.4 4.1 30 44-74 131-160 (270)
231 cd05112 PTKc_Itk Catalytic dom 90.8 0.25 5.4E-06 44.1 3.5 30 44-74 119-148 (256)
232 cd05116 PTKc_Syk Catalytic dom 90.7 0.33 7.2E-06 43.6 4.4 31 44-75 114-144 (257)
233 cd05588 STKc_aPKC Catalytic do 90.7 0.11 2.5E-06 49.1 1.3 31 44-75 115-145 (329)
234 cd05123 STKc_AGC Catalytic dom 90.7 0.4 8.6E-06 42.5 4.8 32 44-76 112-143 (250)
235 cd05607 STKc_GRK7 Catalytic do 90.7 0.17 3.7E-06 46.4 2.4 31 44-75 114-144 (277)
236 cd06648 STKc_PAK_II Catalytic 90.7 0.25 5.4E-06 45.5 3.5 30 44-74 134-163 (285)
237 cd05589 STKc_PKN Catalytic dom 90.7 0.25 5.5E-06 46.5 3.7 31 44-75 120-150 (324)
238 PLN00009 cyclin-dependent kina 90.7 0.51 1.1E-05 43.3 5.6 30 45-74 122-151 (294)
239 cd05596 STKc_ROCK Catalytic do 90.6 0.13 2.9E-06 49.8 1.7 30 44-74 161-190 (370)
240 KOG0581|consensus 90.6 0.25 5.4E-06 48.5 3.6 36 43-79 197-232 (364)
241 cd07841 STKc_CDK7 Catalytic do 90.6 0.3 6.4E-06 44.9 4.0 51 23-75 101-151 (298)
242 PHA03210 serine/threonine kina 90.6 0.27 5.8E-06 50.0 4.0 30 44-74 286-315 (501)
243 cd05633 STKc_GRK3 Catalytic do 90.6 0.24 5.1E-06 45.6 3.3 30 44-74 116-145 (279)
244 cd05608 STKc_GRK1 Catalytic do 90.6 0.12 2.6E-06 47.5 1.3 30 44-74 116-145 (280)
245 cd05059 PTKc_Tec_like Catalyti 90.6 0.28 6.1E-06 44.0 3.7 30 45-75 120-149 (256)
246 COG3642 Mn2+-dependent serine/ 90.6 0.26 5.6E-06 44.7 3.4 59 186-244 51-113 (204)
247 cd06625 STKc_MEKK3_like Cataly 90.5 0.16 3.4E-06 45.5 2.0 31 44-75 123-153 (263)
248 cd08220 STKc_Nek8 Catalytic do 90.5 0.26 5.5E-06 43.9 3.4 32 44-75 120-151 (256)
249 cd07857 STKc_MPK1 Catalytic do 90.5 0.23 4.9E-06 46.9 3.2 30 44-74 124-153 (332)
250 cd05111 PTK_HER3 Pseudokinase 90.5 0.38 8.3E-06 44.0 4.6 31 44-75 128-158 (279)
251 cd07873 STKc_PCTAIRE1 Catalyti 90.5 0.11 2.5E-06 48.0 1.1 31 44-75 123-153 (301)
252 cd05099 PTKc_FGFR4 Catalytic d 90.4 0.18 3.8E-06 47.2 2.3 31 44-75 153-183 (314)
253 PHA03207 serine/threonine kina 90.4 0.2 4.2E-06 48.9 2.7 30 44-74 204-233 (392)
254 cd05056 PTKc_FAK Catalytic dom 90.3 0.32 7E-06 44.0 3.9 31 44-75 126-156 (270)
255 cd05079 PTKc_Jak1_rpt2 Catalyt 90.3 0.16 3.5E-06 46.5 1.9 32 43-75 127-158 (284)
256 cd06624 STKc_ASK Catalytic dom 90.3 0.18 3.8E-06 45.6 2.1 31 44-74 127-157 (268)
257 cd05114 PTKc_Tec_Rlk Catalytic 90.3 0.29 6.2E-06 43.9 3.5 31 44-75 119-149 (256)
258 cd08221 STKc_Nek9 Catalytic do 90.3 0.27 5.9E-06 43.9 3.4 32 44-76 120-151 (256)
259 cd05057 PTKc_EGFR_like Catalyt 90.2 0.34 7.4E-06 44.1 4.0 32 44-76 128-159 (279)
260 cd05581 STKc_PDK1 Catalytic do 90.2 0.22 4.8E-06 44.8 2.7 32 43-75 120-151 (280)
261 cd05579 STKc_MAST_like Catalyt 90.1 0.28 6.1E-06 43.6 3.3 32 44-76 112-143 (265)
262 cd05033 PTKc_EphR Catalytic do 90.1 0.16 3.4E-06 45.9 1.7 32 44-76 125-156 (266)
263 cd06613 STKc_MAP4K3_like Catal 90.1 0.18 3.8E-06 45.1 2.0 31 44-75 120-150 (262)
264 cd07839 STKc_CDK5 Catalytic do 90.1 0.31 6.7E-06 44.3 3.6 30 44-74 118-147 (284)
265 cd08529 STKc_FA2-like Catalyti 90.1 0.35 7.5E-06 43.0 3.8 31 44-75 120-150 (256)
266 PTZ00284 protein kinase; Provi 90.0 0.3 6.6E-06 48.8 3.7 31 44-74 251-296 (467)
267 cd05615 STKc_cPKC_alpha Cataly 89.9 0.15 3.3E-06 48.1 1.5 30 44-74 120-149 (323)
268 cd05049 PTKc_Trk Catalytic dom 89.9 0.38 8.2E-06 43.6 4.0 30 44-74 141-170 (280)
269 cd05048 PTKc_Ror Catalytic Dom 89.9 0.34 7.4E-06 44.0 3.7 31 44-75 143-173 (283)
270 cd05095 PTKc_DDR2 Catalytic do 89.9 0.44 9.6E-06 43.9 4.5 30 44-74 149-178 (296)
271 cd06638 STKc_myosinIIIA Cataly 89.9 0.16 3.4E-06 46.3 1.5 31 44-75 143-173 (286)
272 cd05097 PTKc_DDR_like Catalyti 89.8 0.33 7.1E-06 44.8 3.6 31 44-75 148-178 (295)
273 cd07848 STKc_CDKL5 Catalytic d 89.8 0.17 3.6E-06 46.3 1.6 31 44-75 119-149 (287)
274 KOG0616|consensus 89.8 0.45 9.9E-06 46.0 4.5 45 26-75 149-193 (355)
275 cd07845 STKc_CDK10 Catalytic d 89.8 0.35 7.5E-06 44.9 3.7 30 45-75 128-157 (309)
276 cd08216 PK_STRAD Pseudokinase 89.7 0.39 8.5E-06 44.5 4.1 31 44-75 120-150 (314)
277 cd06652 STKc_MEKK2 Catalytic d 89.7 0.34 7.3E-06 43.7 3.5 31 44-75 125-155 (265)
278 PHA03390 pk1 serine/threonine- 89.7 0.5 1.1E-05 43.1 4.7 32 44-75 128-159 (267)
279 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 89.7 0.19 4.1E-06 45.9 1.8 31 44-75 127-157 (284)
280 cd07867 STKc_CDC2L6 Catalytic 89.7 0.39 8.4E-06 44.5 3.9 32 44-75 127-161 (317)
281 cd06641 STKc_MST3 Catalytic do 89.6 0.52 1.1E-05 42.9 4.7 32 43-75 119-150 (277)
282 cd06614 STKc_PAK Catalytic dom 89.6 0.39 8.4E-06 43.9 3.9 30 44-74 135-164 (286)
283 smart00221 STYKc Protein kinas 89.6 0.34 7.5E-06 41.7 3.4 32 45-77 118-149 (225)
284 cd05115 PTKc_Zap-70 Catalytic 89.6 0.42 9.1E-06 43.2 4.0 30 44-74 114-143 (257)
285 cd05035 PTKc_Axl_like Catalyti 89.6 0.21 4.5E-06 44.9 2.0 30 44-74 132-161 (273)
286 cd06654 STKc_PAK1 Catalytic do 89.6 0.25 5.4E-06 45.8 2.6 31 44-75 135-165 (296)
287 cd06655 STKc_PAK2 Catalytic do 89.5 0.26 5.6E-06 45.8 2.7 31 44-75 134-164 (296)
288 KOG1163|consensus 89.5 0.51 1.1E-05 44.6 4.5 38 43-83 129-168 (341)
289 cd05073 PTKc_Hck Catalytic dom 89.5 0.34 7.4E-06 43.6 3.4 30 44-74 121-150 (260)
290 cd05619 STKc_nPKC_theta Cataly 89.5 0.17 3.7E-06 47.7 1.4 31 44-75 115-145 (316)
291 cd08530 STKc_CNK2-like Catalyt 89.5 0.52 1.1E-05 41.8 4.5 33 43-76 121-153 (256)
292 cd05090 PTKc_Ror1 Catalytic do 89.5 0.45 9.7E-06 43.4 4.2 31 44-75 143-173 (283)
293 cd05044 PTKc_c-ros Catalytic d 89.4 0.37 8.1E-06 43.3 3.6 31 44-75 125-160 (269)
294 cd06608 STKc_myosinIII_like Ca 89.4 0.42 9.1E-06 42.8 3.9 32 44-76 132-163 (275)
295 cd08228 STKc_Nek6 Catalytic do 89.4 0.4 8.6E-06 43.1 3.7 32 43-75 124-155 (267)
296 cd06630 STKc_MEKK1 Catalytic d 89.4 0.37 8E-06 43.2 3.5 33 44-76 122-154 (268)
297 PHA03211 serine/threonine kina 89.4 0.39 8.4E-06 48.7 4.0 31 44-75 279-309 (461)
298 cd05576 STKc_RPK118_like Catal 89.4 0.32 6.9E-06 43.5 3.1 29 44-73 104-132 (237)
299 cd07837 STKc_CdkB_plant Cataly 89.3 0.58 1.3E-05 42.8 4.8 31 44-74 129-159 (295)
300 cd05098 PTKc_FGFR1 Catalytic d 89.3 0.27 5.9E-06 45.7 2.6 31 44-75 159-189 (307)
301 cd05609 STKc_MAST Catalytic do 89.2 0.21 4.5E-06 46.4 1.8 31 44-75 120-150 (305)
302 cd07870 STKc_PFTAIRE2 Catalyti 89.2 0.2 4.3E-06 46.0 1.6 30 44-74 122-151 (291)
303 cd05087 PTKc_Aatyk1_Aatyk3 Cat 89.2 0.53 1.2E-05 42.6 4.4 30 44-74 119-148 (269)
304 cd05074 PTKc_Tyro3 Catalytic d 89.2 0.45 9.8E-06 42.9 3.9 30 44-74 132-161 (273)
305 cd05050 PTKc_Musk Catalytic do 89.2 0.35 7.5E-06 44.3 3.2 30 44-74 149-178 (288)
306 cd05101 PTKc_FGFR2 Catalytic d 89.2 0.44 9.4E-06 44.1 3.9 30 44-74 156-185 (304)
307 cd05605 STKc_GRK4_like Catalyt 89.1 0.2 4.3E-06 46.1 1.6 31 44-75 121-151 (285)
308 cd05570 STKc_PKC Catalytic dom 89.1 0.33 7.2E-06 45.6 3.1 31 44-75 115-145 (318)
309 cd05072 PTKc_Lyn Catalytic dom 89.1 0.37 8.1E-06 43.2 3.3 31 44-75 122-152 (261)
310 cd05051 PTKc_DDR Catalytic dom 89.1 0.37 7.9E-06 44.1 3.3 30 44-74 149-178 (296)
311 cd05572 STKc_cGK_PKG Catalytic 89.1 0.41 8.9E-06 43.0 3.6 32 44-76 112-143 (262)
312 cd06637 STKc_TNIK Catalytic do 89.0 0.16 3.4E-06 45.8 0.8 30 45-75 131-160 (272)
313 cd05067 PTKc_Lck_Blk Catalytic 89.0 0.46 1E-05 42.7 3.8 32 44-76 121-152 (260)
314 cd07833 STKc_CDKL Catalytic do 89.0 0.58 1.3E-05 42.4 4.5 33 44-77 119-151 (288)
315 cd05032 PTKc_InsR_like Catalyt 88.9 0.43 9.2E-06 43.2 3.6 31 43-74 137-167 (277)
316 cd05106 PTKc_CSF-1R Catalytic 88.9 0.67 1.5E-05 45.0 5.2 30 44-74 231-260 (374)
317 cd05058 PTKc_Met_Ron Catalytic 88.9 0.23 4.9E-06 44.6 1.7 30 44-74 117-146 (262)
318 cd07850 STKc_JNK Catalytic dom 88.9 0.46 1E-05 45.3 3.9 31 44-75 137-167 (353)
319 KOG0598|consensus 88.9 0.34 7.4E-06 47.5 3.0 39 44-83 144-182 (357)
320 cd05606 STKc_beta_ARK Catalyti 88.9 0.42 9.2E-06 43.8 3.6 30 44-74 116-145 (278)
321 cd06629 STKc_MAPKKK_Bck1_like 88.8 0.71 1.5E-05 41.7 5.0 32 44-76 127-158 (272)
322 cd06639 STKc_myosinIIIB Cataly 88.8 0.43 9.3E-06 43.7 3.6 31 44-75 147-177 (291)
323 cd06610 STKc_OSR1_SPAK Catalyt 88.8 0.4 8.7E-06 42.8 3.3 32 43-75 120-151 (267)
324 cd06643 STKc_SLK Catalytic dom 88.8 0.3 6.5E-06 44.5 2.5 31 44-75 122-152 (282)
325 cd07880 STKc_p38gamma_MAPK12 C 88.8 0.42 9E-06 45.5 3.5 31 44-75 137-167 (343)
326 cd07843 STKc_CDC2L1 Catalytic 88.8 0.5 1.1E-05 43.3 4.0 29 45-74 126-154 (293)
327 cd08225 STKc_Nek5 Catalytic do 88.8 0.33 7.2E-06 43.1 2.7 32 44-75 120-151 (257)
328 cd07849 STKc_ERK1_2_like Catal 88.7 0.39 8.4E-06 45.4 3.2 30 45-75 126-155 (336)
329 cd07861 STKc_CDK1_euk Catalyti 88.7 0.35 7.7E-06 43.9 2.9 31 44-75 120-150 (285)
330 cd07838 STKc_CDK4_6_like Catal 88.6 0.66 1.4E-05 42.0 4.6 30 45-75 127-156 (287)
331 cd06635 STKc_TAO1 Catalytic do 88.6 0.29 6.3E-06 45.8 2.3 31 44-75 144-174 (317)
332 cd07846 STKc_CDKL2_3 Catalytic 88.6 0.4 8.7E-06 43.5 3.2 31 44-75 119-149 (286)
333 cd06619 PKc_MKK5 Catalytic dom 88.5 0.25 5.5E-06 45.1 1.8 30 44-74 114-143 (279)
334 cd06646 STKc_MAP4K5 Catalytic 88.5 0.21 4.6E-06 45.0 1.3 31 44-75 125-155 (267)
335 cd05086 PTKc_Aatyk2 Catalytic 88.5 0.31 6.8E-06 44.2 2.4 29 45-74 119-147 (268)
336 cd06631 STKc_YSK4 Catalytic do 88.4 0.55 1.2E-05 42.2 4.0 30 45-75 122-151 (265)
337 cd08229 STKc_Nek7 Catalytic do 88.4 0.23 5.1E-06 44.6 1.5 31 44-75 125-155 (267)
338 cd05630 STKc_GRK6 Catalytic do 88.4 0.26 5.6E-06 45.5 1.8 31 44-75 121-151 (285)
339 cd07847 STKc_CDKL1_4 Catalytic 88.3 0.51 1.1E-05 42.8 3.7 32 44-76 119-150 (286)
340 cd08224 STKc_Nek6_Nek7 Catalyt 88.3 0.29 6.2E-06 43.8 2.0 31 44-75 125-155 (267)
341 cd06657 STKc_PAK4 Catalytic do 88.2 0.38 8.1E-06 44.7 2.8 30 44-74 135-164 (292)
342 cd07836 STKc_Pho85 Catalytic d 88.2 0.44 9.6E-06 43.2 3.2 30 44-74 119-148 (284)
343 cd06658 STKc_PAK5 Catalytic do 88.2 0.51 1.1E-05 43.7 3.6 29 45-74 138-166 (292)
344 cd08218 STKc_Nek1 Catalytic do 88.2 0.57 1.2E-05 41.8 3.8 31 44-75 120-150 (256)
345 cd07844 STKc_PCTAIRE_like Cata 88.2 0.21 4.6E-06 45.7 1.1 30 44-74 122-151 (291)
346 cd06640 STKc_MST4 Catalytic do 88.1 0.55 1.2E-05 42.8 3.8 30 44-74 120-149 (277)
347 cd06612 STKc_MST1_2 Catalytic 88.1 0.31 6.7E-06 43.3 2.0 31 44-75 118-148 (256)
348 cd05100 PTKc_FGFR3 Catalytic d 88.1 0.3 6.6E-06 46.1 2.1 30 44-74 153-182 (334)
349 cd06645 STKc_MAP4K3 Catalytic 88.1 0.23 5E-06 44.8 1.2 29 45-74 126-154 (267)
350 cd05110 PTKc_HER4 Catalytic do 88.1 0.3 6.6E-06 45.3 2.0 31 44-75 128-158 (303)
351 cd07835 STKc_CDK1_like Catalyt 88.0 0.46 1E-05 43.2 3.2 30 44-74 118-147 (283)
352 cd05103 PTKc_VEGFR2 Catalytic 88.0 0.4 8.6E-06 45.7 2.9 32 43-75 197-228 (343)
353 cd06917 STKc_NAK1_like Catalyt 88.0 0.44 9.5E-06 43.2 3.0 31 44-75 120-150 (277)
354 PTZ00283 serine/threonine prot 88.0 0.29 6.2E-06 49.9 2.0 30 44-74 162-191 (496)
355 cd05611 STKc_Rim15_like Cataly 88.0 0.66 1.4E-05 41.6 4.1 31 44-75 116-146 (260)
356 cd06651 STKc_MEKK3 Catalytic d 87.9 0.56 1.2E-05 42.3 3.7 30 44-74 125-154 (266)
357 cd06659 STKc_PAK6 Catalytic do 87.8 0.54 1.2E-05 43.7 3.6 30 44-74 136-165 (297)
358 cd05610 STKc_MASTL Catalytic d 87.8 0.6 1.3E-05 49.4 4.3 30 45-75 124-153 (669)
359 cd05063 PTKc_EphR_A2 Catalytic 87.7 0.51 1.1E-05 42.5 3.2 30 44-74 126-155 (268)
360 cd05055 PTKc_PDGFR Catalytic d 87.7 0.3 6.4E-06 45.5 1.7 30 44-74 160-189 (302)
361 cd06606 STKc_MAPKKK Catalytic 87.6 0.38 8.3E-06 42.3 2.3 34 44-78 120-153 (260)
362 cd05061 PTKc_InsR Catalytic do 87.5 0.3 6.6E-06 44.8 1.7 30 44-74 138-167 (288)
363 cd06636 STKc_MAP4K4_6 Catalyti 87.5 0.27 5.9E-06 44.7 1.3 31 44-75 140-170 (282)
364 cd05045 PTKc_RET Catalytic dom 87.4 0.3 6.6E-06 44.8 1.6 30 44-74 146-175 (290)
365 cd06628 STKc_MAPKKK_Byr2_like 87.4 0.55 1.2E-05 42.2 3.2 30 44-74 125-154 (267)
366 cd07879 STKc_p38delta_MAPK13 C 87.3 0.29 6.2E-06 46.6 1.4 31 44-75 136-166 (342)
367 cd05092 PTKc_TrkA Catalytic do 87.3 0.51 1.1E-05 43.1 3.0 30 44-74 141-170 (280)
368 cd05577 STKc_GRK Catalytic dom 87.2 0.24 5.2E-06 45.1 0.8 30 44-74 114-143 (277)
369 cd07840 STKc_CDK9_like Catalyt 87.2 0.45 9.9E-06 42.9 2.6 32 44-76 119-150 (287)
370 cd07852 STKc_MAPK15 Catalytic 87.2 0.36 7.7E-06 45.6 2.0 30 44-74 126-155 (337)
371 cd05046 PTK_CCK4 Pseudokinase 87.2 0.85 1.9E-05 41.2 4.4 30 44-74 136-165 (275)
372 cd07865 STKc_CDK9 Catalytic do 87.2 0.51 1.1E-05 43.3 2.9 30 45-75 139-168 (310)
373 cd06607 STKc_TAO Catalytic dom 87.2 0.48 1E-05 44.0 2.8 32 44-76 134-165 (307)
374 cd06633 STKc_TAO3 Catalytic do 87.2 0.41 9E-06 44.8 2.4 31 44-75 140-170 (313)
375 cd07856 STKc_Sty1_Hog1 Catalyt 87.1 0.7 1.5E-05 43.7 4.0 31 44-75 127-157 (328)
376 KOG0198|consensus 87.0 0.84 1.8E-05 44.2 4.4 33 43-75 135-167 (313)
377 cd07855 STKc_ERK5 Catalytic do 87.0 0.69 1.5E-05 43.6 3.9 30 44-74 126-155 (334)
378 KOG0610|consensus 87.0 0.83 1.8E-05 45.9 4.4 45 27-76 185-229 (459)
379 TIGR00938 thrB_alt homoserine 87.0 0.67 1.5E-05 43.8 3.7 34 208-244 100-133 (307)
380 cd07830 STKc_MAK_like Catalyti 86.8 0.72 1.6E-05 41.8 3.7 30 44-74 118-147 (283)
381 KOG1006|consensus 86.8 0.22 4.8E-06 47.6 0.4 33 42-75 185-217 (361)
382 KOG1166|consensus 86.7 0.84 1.8E-05 50.4 4.7 30 44-73 813-848 (974)
383 cd06634 STKc_TAO2 Catalytic do 86.6 0.57 1.2E-05 43.7 3.0 31 44-75 134-164 (308)
384 KOG0612|consensus 86.6 0.67 1.4E-05 51.7 3.8 55 13-73 167-222 (1317)
385 cd06621 PKc_MAPKK_Pek1_like Ca 86.6 0.39 8.4E-06 44.1 1.8 31 44-75 124-154 (287)
386 KOG0600|consensus 86.6 0.74 1.6E-05 47.2 3.9 35 42-77 235-269 (560)
387 cd05065 PTKc_EphR_B Catalytic 86.6 0.44 9.5E-06 43.0 2.1 31 44-75 125-155 (269)
388 cd05104 PTKc_Kit Catalytic dom 86.6 0.48 1E-05 46.0 2.5 30 44-74 233-262 (375)
389 cd07842 STKc_CDK8_like Catalyt 86.5 0.6 1.3E-05 43.1 3.1 32 44-75 127-161 (316)
390 cd06632 STKc_MEKK1_plant Catal 86.5 0.34 7.4E-06 43.0 1.4 31 44-75 121-151 (258)
391 cd07864 STKc_CDK12 Catalytic d 86.5 0.59 1.3E-05 42.9 3.0 31 44-75 135-165 (302)
392 cd06626 STKc_MEKK4 Catalytic d 86.2 0.33 7.2E-06 43.3 1.2 31 44-75 118-148 (264)
393 cd06653 STKc_MEKK3_like_1 Cata 86.1 0.66 1.4E-05 41.8 3.1 31 44-75 125-155 (264)
394 cd06642 STKc_STK25-YSK1 Cataly 86.1 0.52 1.1E-05 42.8 2.4 31 44-75 120-150 (277)
395 cd07860 STKc_CDK2_3 Catalytic 85.9 0.98 2.1E-05 41.0 4.2 30 44-74 119-148 (284)
396 PRK13184 pknD serine/threonine 85.8 0.98 2.1E-05 49.8 4.7 32 44-76 132-163 (932)
397 PLN03224 probable serine/threo 85.8 0.79 1.7E-05 47.2 3.8 30 44-74 328-357 (507)
398 cd07851 STKc_p38 Catalytic dom 85.8 0.86 1.9E-05 43.3 3.8 31 44-75 137-167 (343)
399 PLN00181 protein SPA1-RELATED; 85.7 1 2.3E-05 48.4 4.8 31 43-74 98-128 (793)
400 KOG0659|consensus 85.7 0.48 1E-05 45.2 2.0 33 42-75 118-150 (318)
401 cd05105 PTKc_PDGFR_alpha Catal 85.6 1.2 2.7E-05 43.9 4.9 30 44-74 256-285 (400)
402 cd07858 STKc_TEY_MAPK_plant Ca 85.4 0.83 1.8E-05 43.2 3.5 32 44-76 127-158 (337)
403 KOG1164|consensus 85.3 0.4 8.7E-06 45.8 1.3 33 42-74 139-175 (322)
404 KOG1167|consensus 85.3 1 2.2E-05 45.1 4.0 34 42-75 149-182 (418)
405 cd07877 STKc_p38alpha_MAPK14 C 85.2 0.53 1.2E-05 44.9 2.1 31 44-75 139-169 (345)
406 cd06609 STKc_MST3_like Catalyt 85.1 0.83 1.8E-05 41.3 3.2 51 23-75 97-147 (274)
407 KOG0605|consensus 85.1 0.46 1E-05 48.8 1.6 32 42-74 258-289 (550)
408 cd06620 PKc_MAPKK_Byr1_like Ca 84.9 0.77 1.7E-05 41.9 2.9 29 45-74 124-152 (284)
409 KOG0578|consensus 84.9 1.4 3.1E-05 45.5 5.0 37 43-80 387-423 (550)
410 cd05036 PTKc_ALK_LTK Catalytic 84.9 1.4 3.1E-05 40.0 4.6 31 45-75 136-168 (277)
411 cd07854 STKc_MAPK4_6 Catalytic 84.7 0.86 1.9E-05 43.3 3.2 32 44-75 133-164 (342)
412 cd07831 STKc_MOK Catalytic dom 84.4 0.55 1.2E-05 42.4 1.7 29 44-74 119-147 (282)
413 KOG2345|consensus 84.4 2.2 4.7E-05 40.5 5.6 31 45-76 149-179 (302)
414 cd05077 PTK_Jak1_rpt1 Pseudoki 84.3 1.6 3.5E-05 39.5 4.8 32 43-74 123-160 (262)
415 cd05043 PTK_Ryk Pseudokinase d 84.1 0.57 1.2E-05 42.6 1.7 30 44-74 136-165 (280)
416 cd05078 PTK_Jak2_Jak3_rpt1 Pse 84.1 1.3 2.8E-05 39.9 3.9 32 43-74 118-156 (258)
417 cd07829 STKc_CDK_like Catalyti 83.9 1.6 3.4E-05 39.4 4.5 30 45-75 118-147 (282)
418 KOG0660|consensus 83.8 0.55 1.2E-05 46.1 1.5 37 42-79 142-178 (359)
419 cd06647 STKc_PAK_I Catalytic d 83.7 0.98 2.1E-05 41.8 3.1 30 44-74 134-163 (293)
420 PTZ00024 cyclin-dependent prot 83.5 1.1 2.3E-05 42.3 3.3 31 44-75 138-168 (335)
421 PF01636 APH: Phosphotransfera 83.4 0.38 8.2E-06 42.0 0.2 58 187-244 43-110 (239)
422 cd06611 STKc_SLK_like Catalyti 83.3 1.4 2.9E-05 40.1 3.8 31 44-75 122-152 (280)
423 KOG1187|consensus 83.0 1.4 3E-05 43.4 4.0 41 36-78 189-229 (361)
424 KOG0596|consensus 82.6 0.92 2E-05 47.2 2.6 30 43-74 478-507 (677)
425 cd05107 PTKc_PDGFR_beta Cataly 82.3 0.99 2.2E-05 44.6 2.7 29 45-74 259-287 (401)
426 KOG0593|consensus 81.9 0.84 1.8E-05 44.4 1.9 30 44-74 120-149 (396)
427 cd08222 STKc_Nek11 Catalytic d 81.8 1.3 2.8E-05 39.6 3.1 31 43-75 124-154 (260)
428 KOG0615|consensus 81.7 0.73 1.6E-05 46.3 1.5 33 43-75 294-328 (475)
429 TIGR02906 spore_CotS spore coa 81.7 1.3 2.8E-05 41.3 3.2 34 208-244 72-105 (313)
430 KOG0595|consensus 81.7 2.5 5.4E-05 42.4 5.1 42 44-85 128-174 (429)
431 KOG1235|consensus 81.5 1.1 2.3E-05 46.7 2.6 31 43-73 319-352 (538)
432 cd05146 RIO3_euk RIO kinase fa 81.5 2.8 6.2E-05 37.8 5.1 58 186-243 78-145 (197)
433 KOG3021|consensus 81.1 1.8 3.9E-05 40.6 3.7 44 42-87 208-251 (313)
434 KOG0665|consensus 80.8 0.93 2E-05 44.2 1.8 37 42-79 135-171 (369)
435 COG1718 RIO1 Serine/threonine 80.5 1.1 2.3E-05 42.5 2.0 27 44-72 186-212 (268)
436 PHA02988 hypothetical protein; 80.2 1.6 3.4E-05 40.4 3.1 28 46-74 144-171 (283)
437 cd05064 PTKc_EphR_A10 Catalyti 79.8 1.8 4E-05 39.1 3.4 30 44-74 126-155 (266)
438 cd05120 APH_ChoK_like Aminogly 79.8 1.8 4E-05 34.3 3.1 54 190-243 47-106 (155)
439 COG5072 ALK1 Serine/threonine 79.5 1.7 3.7E-05 43.6 3.2 60 23-84 317-379 (488)
440 KOG0577|consensus 78.9 0.95 2.1E-05 47.6 1.3 36 43-79 144-179 (948)
441 TIGR03724 arch_bud32 Kae1-asso 78.8 1.5 3.3E-05 38.0 2.4 57 188-244 51-111 (199)
442 PF10009 DUF2252: Uncharacteri 78.4 8.4 0.00018 38.4 7.8 49 41-89 40-91 (385)
443 PRK10271 thiK thiamine kinase; 78.4 5.2 0.00011 36.0 5.7 56 209-269 2-57 (188)
444 KOG0582|consensus 78.0 3.2 6.8E-05 42.3 4.6 27 44-71 145-171 (516)
445 KOG0670|consensus 77.9 1.6 3.4E-05 45.4 2.4 31 44-74 555-585 (752)
446 KOG0662|consensus 77.9 2.6 5.6E-05 38.4 3.6 27 47-74 123-149 (292)
447 KOG4717|consensus 77.6 2.3 4.9E-05 44.3 3.5 47 42-88 135-181 (864)
448 KOG0032|consensus 77.5 2.2 4.8E-05 42.3 3.4 40 43-82 153-195 (382)
449 cd08227 PK_STRAD_alpha Pseudok 77.4 3.5 7.5E-05 38.7 4.6 27 44-71 120-146 (327)
450 KOG1035|consensus 77.3 2.5 5.4E-05 47.6 4.0 32 43-75 715-746 (1351)
451 PF07714 Pkinase_Tyr: Protein 75.3 5.2 0.00011 36.2 5.0 30 46-76 124-153 (259)
452 PRK05231 homoserine kinase; Pr 75.3 3.4 7.4E-05 38.9 3.9 34 208-244 99-132 (319)
453 KOG1989|consensus 74.7 3.6 7.7E-05 44.3 4.2 67 12-81 134-201 (738)
454 KOG0586|consensus 74.5 1.5 3.2E-05 45.8 1.3 45 42-91 172-216 (596)
455 KOG0661|consensus 74.2 3 6.5E-05 42.7 3.3 53 16-74 104-158 (538)
456 cd08226 PK_STRAD_beta Pseudoki 74.1 3 6.5E-05 39.2 3.2 28 44-72 120-147 (328)
457 KOG0663|consensus 73.6 2.1 4.6E-05 42.2 2.0 32 42-74 194-225 (419)
458 cd05076 PTK_Tyk2_rpt1 Pseudoki 73.6 4.9 0.00011 36.6 4.4 31 44-74 136-172 (274)
459 KOG0585|consensus 72.6 2.3 4.9E-05 43.6 2.0 32 44-76 229-260 (576)
460 KOG0192|consensus 72.4 5.6 0.00012 39.2 4.7 33 46-78 164-196 (362)
461 COG3281 Ble Uncharacterized pr 72.2 2.1 4.6E-05 42.3 1.6 44 44-89 284-336 (438)
462 KOG0664|consensus 71.7 2.4 5.2E-05 40.9 1.9 30 44-74 175-204 (449)
463 KOG0579|consensus 71.4 4 8.6E-05 43.6 3.5 32 44-76 149-180 (1187)
464 KOG3087|consensus 71.3 5.1 0.00011 36.7 3.7 59 186-244 62-134 (229)
465 COG0515 SPS1 Serine/threonine 70.6 2.5 5.3E-05 37.0 1.6 30 45-74 121-150 (384)
466 cd05169 PIKKc_TOR TOR (Target 70.0 5.4 0.00012 37.6 3.9 32 42-73 179-210 (280)
467 KOG2268|consensus 69.9 7.2 0.00016 38.8 4.7 27 44-71 221-247 (465)
468 KOG0604|consensus 68.8 5.3 0.00012 39.0 3.5 42 43-84 179-222 (400)
469 KOG0591|consensus 68.6 7.3 0.00016 37.8 4.3 31 43-74 146-176 (375)
470 cd00142 PI3Kc_like Phosphoinos 68.4 4.5 9.8E-05 36.8 2.9 39 42-80 126-164 (219)
471 KOG0607|consensus 68.2 7.5 0.00016 38.4 4.4 49 23-75 178-228 (463)
472 cd05172 PIKKc_DNA-PK DNA-depen 68.1 8.5 0.00018 35.6 4.7 35 42-76 134-168 (235)
473 PTZ00266 NIMA-related protein 68.0 5.5 0.00012 44.5 3.9 31 44-74 144-190 (1021)
474 COG0510 ycfN Thiamine kinase a 67.9 4.6 9.9E-05 38.1 2.9 39 202-244 59-98 (269)
475 cd05152 MPH2' Macrolide 2'-Pho 67.8 6.5 0.00014 37.0 3.9 47 198-244 71-130 (276)
476 KOG0671|consensus 67.8 9.4 0.0002 38.2 5.0 33 43-75 210-261 (415)
477 PRK10359 lipopolysaccharide co 67.7 6.2 0.00013 36.6 3.6 39 206-244 118-156 (232)
478 KOG4236|consensus 67.6 3.4 7.4E-05 43.1 2.0 32 44-75 683-716 (888)
479 cd05171 PIKKc_ATM Ataxia telan 67.5 5.1 0.00011 38.0 3.1 31 43-73 180-210 (279)
480 PRK10593 hypothetical protein; 67.3 6.5 0.00014 37.4 3.8 58 186-244 59-129 (297)
481 KOG1152|consensus 66.7 4.7 0.0001 42.5 2.8 33 42-75 687-719 (772)
482 PF14531 Kinase-like: Kinase-l 66.4 6.9 0.00015 37.5 3.8 31 44-75 164-194 (288)
483 KOG0590|consensus 66.1 4.9 0.00011 42.3 3.0 39 42-81 437-475 (601)
484 KOG0695|consensus 64.6 5.8 0.00012 39.3 2.9 79 4-87 333-412 (593)
485 KOG0193|consensus 64.6 5.6 0.00012 41.9 3.0 35 44-79 507-541 (678)
486 KOG0666|consensus 64.0 5 0.00011 39.4 2.3 31 44-74 151-184 (438)
487 KOG0694|consensus 63.1 4.9 0.00011 42.7 2.3 60 23-87 470-529 (694)
488 cd05170 PIKKc_SMG1 Suppressor 63.0 5.7 0.00012 38.2 2.6 31 43-73 208-238 (307)
489 PF10707 YrbL-PhoP_reg: PhoP r 61.6 16 0.00036 32.9 5.1 42 25-70 122-166 (199)
490 cd00892 PIKKc_ATR ATR (Ataxia 61.5 6.9 0.00015 36.3 2.7 35 42-76 137-171 (237)
491 smart00146 PI3Kc Phosphoinosit 61.5 6.6 0.00014 35.2 2.6 37 42-79 99-135 (202)
492 KOG0584|consensus 59.9 12 0.00025 39.6 4.2 52 23-74 142-194 (632)
493 cd05164 PIKKc Phosphoinositide 59.6 6.2 0.00013 36.1 2.1 35 42-76 129-163 (222)
494 KOG1027|consensus 58.9 9.3 0.0002 41.6 3.4 31 44-74 625-659 (903)
495 PRK14705 glycogen branching en 58.4 19 0.00042 41.1 6.0 49 42-90 329-390 (1224)
496 PF05445 Pox_ser-thr_kin: Poxv 58.2 8.2 0.00018 38.5 2.7 20 41-60 295-314 (434)
497 cd05163 TRRAP TRansformation/t 57.5 10 0.00022 35.6 3.1 31 43-73 153-183 (253)
498 PHA03111 Ser/Thr kinase; Provi 57.5 17 0.00038 36.2 4.8 21 41-61 299-319 (444)
499 smart00090 RIO RIO-like kinase 56.6 18 0.00038 33.2 4.6 55 189-243 105-168 (237)
500 COG2112 Predicted Ser/Thr prot 56.5 6.8 0.00015 35.5 1.7 39 44-84 124-164 (201)
No 1
>KOG4720|consensus
Probab=100.00 E-value=2.6e-46 Score=349.13 Aligned_cols=171 Identities=48% Similarity=0.824 Sum_probs=165.5
Q ss_pred chhhhhcCCCCHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhC
Q psy8745 12 SSRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAG 91 (317)
Q Consensus 12 ~~~~~~~~p~~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~ 91 (317)
+++....+| ..+.|.+|+.||++.+...++|+|||||||.++|||+++..+.|.|||||||+||+.+|||||||||++|
T Consensus 217 ~kq~~~~~~-~~~~L~~Ei~~l~E~l~~L~sPVVFcHNDLL~~Niiy~~~~~~v~fIDYEYa~yNY~afDIgNHFnE~aG 295 (391)
T KOG4720|consen 217 NKQNLFDEP-SPEDLGEEISKLKEMLSMLKSPVVFCHNDLLCGNIIYDSEKGSVEFIDYEYAGYNYQAFDIGNHFNEYAG 295 (391)
T ss_pred chhhcccCC-CHHHHHHHHHHHHHHHHhhCCCeEEeecchhhcceeeccccCcEEEEeecccccchhheehhhhHHhhcC
Confidence 677777888 8999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHHHHH
Q psy8745 92 VSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQ 171 (317)
Q Consensus 92 ~~~~d~~~yp~~e~~~~fi~~YL~~y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~R~~ 171 (317)
.+++||+.||+.++|.+||+.||+.|+|.++++.|++.|+.+|+.|++++|+||++||++|++.|+|+|||+.||..|++
T Consensus 296 v~evDYSlyp~rE~Q~qwl~~YLq~~kg~evs~~eVe~lfvqvn~FalAsHlfWavWAllQA~~StIdFdylgYa~lRyn 375 (391)
T KOG4720|consen 296 VEEVDYSLYPTREEQLQWLRDYLQAYKGKEVSDTEVETLFVQVNQFALASHLFWAVWALLQAQNSTIDFDYLGYAFLRYN 375 (391)
T ss_pred CCccchhcCCCHHHHHHHHHHHHhhccCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccchhhHHHHHH
Confidence 98999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhHhhhcCC
Q psy8745 172 GYVLKRDKYLGT 183 (317)
Q Consensus 172 ~y~~~k~el~~~ 183 (317)
+|.+.|.+++++
T Consensus 376 eY~k~k~~~~sl 387 (391)
T KOG4720|consen 376 EYQKRKPEVLSL 387 (391)
T ss_pred HhhccCcceeee
Confidence 999999998765
No 2
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=100.00 E-value=3.5e-38 Score=302.97 Aligned_cols=163 Identities=36% Similarity=0.668 Sum_probs=148.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCC
Q psy8745 23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPG 102 (317)
Q Consensus 23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~ 102 (317)
++.+.+++..+++.+...+.++||||||++++|||++++++.++||||||||+|+|+||||+|||||++++ ++|+.||+
T Consensus 161 ~~~l~~~~~~l~~~~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~nd~~fDIa~~f~E~~~~~-~~~~~~p~ 239 (330)
T PLN02421 161 FEELRDEIVELKEITDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSYSYRGYDIGNHFNEYAGFD-CDYSLYPS 239 (330)
T ss_pred HHHHHHHHHHHHHHhccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCCCccHHHHHHHHHHHcccc-cCcccCcC
Confidence 66788899999988888889999999999999999975457899999999999999999999999998864 78999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhHhhhcC
Q psy8745 103 PEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLG 182 (317)
Q Consensus 103 ~e~~~~fi~~YL~~y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~R~~~y~~~k~el~~ 182 (317)
.++|..|++.|++.......+++++++++.+|+.|.+++|++|++||++|+..|+++|||+.||..||++|++.|+++.+
T Consensus 240 ~~~~~~fl~~Y~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~W~lWa~iq~~~s~i~fdf~~ya~~R~~~y~~~k~~~~~ 319 (330)
T PLN02421 240 KEEQYHFFRHYLRPDDPEEVSDAELEELFVETNFYALASHLYWAIWAIVQAKMSPIDFDYLGYFFLRYKEYKRQKEKLLS 319 (330)
T ss_pred HHHHHHHHHHhCCcccCCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhcCCcCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999975433446778899999999999999999999999999999999999999999999999999999977
Q ss_pred CCCC
Q psy8745 183 TSPP 186 (317)
Q Consensus 183 ~e~~ 186 (317)
+..+
T Consensus 320 ~~~~ 323 (330)
T PLN02421 320 LVRS 323 (330)
T ss_pred cchh
Confidence 7544
No 3
>PTZ00296 choline kinase; Provisional
Probab=100.00 E-value=1.6e-36 Score=302.16 Aligned_cols=159 Identities=29% Similarity=0.507 Sum_probs=139.0
Q ss_pred CHHHHHHHHHHHHHHHh------cCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCC--
Q psy8745 22 GVSQLQSDWQYIETALS------KTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVS-- 93 (317)
Q Consensus 22 ~~~~L~~e~~~L~~~l~------~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~-- 93 (317)
+++.+.+++.++...+. ..+.++||||||++++|||.+ +++|+||||||||+|+|+||||+|||||++..
T Consensus 256 ~~~~l~~e~~~l~~~l~~~~~l~~~~~~~VfCHNDl~~~NiL~~--~~~l~LIDfEYAg~ndpafDIAn~f~E~~~dy~~ 333 (442)
T PTZ00296 256 DIHKYIKESEKFIKFMKVYSKSDNLANDIVFCHNDLQENNIINT--NKCLRLIDFEYSGYNFLATDIANFFIETTIDYSV 333 (442)
T ss_pred hHHHHHHHHHHHHHHHHhhcccccccCCeeEEeCCCCccceeec--CCCEEEEeecccccccHHHHHHHHHHHHhhhcCC
Confidence 56778888999988875 456789999999999999985 35699999999999999999999999999622
Q ss_pred ------CCCCCCCCCHHHHHHHHHHHHHHhcCC---CCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhc--CCCCCCH
Q psy8745 94 ------PIDHSRYPGPEFQLSWLRTYLEEYTGS---PPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEH--SDIEFDF 162 (317)
Q Consensus 94 ------~~d~~~yp~~e~~~~fi~~YL~~y~~~---~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~--s~~~fDy 162 (317)
.++++.||+.++|..||+.||+.+.+. ..++++++.|+.+|+.|.+++|++|++||++|+.. |.++|||
T Consensus 334 ~~~p~f~~d~~~yPs~e~q~~Fi~~Yl~~~~~~~~~~~~~~~v~~l~~ev~~f~l~shl~W~lWaiiqa~~~~s~idFDy 413 (442)
T PTZ00296 334 SHYPFFAIDKKKYISYENRKLFITAYLSNYLDKSLVVPNPKIIDQILEAVEVQALGAHLLWGFWSIIRGYQTKSYNEFDF 413 (442)
T ss_pred CCCCccccCcccCcCHHHHHHHHHHHHHHhccCCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCcccCCCCCCH
Confidence 247889999999999999999987422 23456899999999999999999999999999974 5699999
Q ss_pred HHHHHHHHHHHHHhHhhhcC
Q psy8745 163 FQYASSTYQGYVLKRDKYLG 182 (317)
Q Consensus 163 ~~Ya~~R~~~y~~~k~el~~ 182 (317)
+.||..||++|++.|+.+++
T Consensus 414 ~~Ya~~R~~~Y~~~k~~~~~ 433 (442)
T PTZ00296 414 FLYAKERFKMYDEQKEYLIS 433 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999844
No 4
>PLN02236 choline kinase
Probab=100.00 E-value=2e-35 Score=285.54 Aligned_cols=160 Identities=38% Similarity=0.742 Sum_probs=145.0
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCC------CCC
Q psy8745 22 GVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGV------SPI 95 (317)
Q Consensus 22 ~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~------~~~ 95 (317)
+.+.+.+++++|++.+.....+.|+||||++++|||+++.++.+.+||||||++|+|+||||+||||+++. ..+
T Consensus 178 ~~~~l~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~~~~~Dia~~~~e~~~~y~~~~~~~~ 257 (344)
T PLN02236 178 RLDSLEDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYNPVAYDIANHFCEMAADYHSETPHIL 257 (344)
T ss_pred CHHHHHHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccccchHHHHHHHHHHHHHhhcCCCcccC
Confidence 35688889999998888778899999999999999998645679999999999999999999999998762 135
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHH
Q psy8745 96 DHSRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVL 175 (317)
Q Consensus 96 d~~~yp~~e~~~~fi~~YL~~y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~R~~~y~~ 175 (317)
|++.||+.+++..|++.|++.. |..+++.+++.++.+|+.|.+++|++|++||++|+..|+++|||+.||+.|++.|++
T Consensus 258 ~~~~~~~~~~~~~fi~~Yl~~~-g~~~~~~~~~~l~~~v~~~~~~~~l~W~lWa~iq~~~s~~~fdy~~Ya~~R~~~y~~ 336 (344)
T PLN02236 258 DYSKYPGEEERRRFIRTYLSSS-GEEPSDEEVEQLLDDVEKYTLASHLFWGLWGIISGHVNKIDFDYMEYARQRFEQYWL 336 (344)
T ss_pred chhhCcCHHHHHHHHHHHHhhc-CCCchHHHHHHHHHHHHHHhhHhHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHHHH
Confidence 7788999999999999999875 567788899999999999999999999999999999999999999999999999999
Q ss_pred hHhhhcC
Q psy8745 176 KRDKYLG 182 (317)
Q Consensus 176 ~k~el~~ 182 (317)
+|+++++
T Consensus 337 ~k~~~~~ 343 (344)
T PLN02236 337 RKPELLG 343 (344)
T ss_pred HHHHhcc
Confidence 9999865
No 5
>KOG2686|consensus
Probab=100.00 E-value=7.9e-35 Score=279.10 Aligned_cols=159 Identities=34% Similarity=0.653 Sum_probs=142.0
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCC-C------
Q psy8745 22 GVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVS-P------ 94 (317)
Q Consensus 22 ~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~-~------ 94 (317)
....+..|+.++++..+..+.++||||||++.||||+.+..+.+++||||||+||+++||||||||||+.++ .
T Consensus 190 ~~~~l~~e~~~~~~~~e~~~~~vvFcHNDlq~gNiL~~~~t~~Lv~IDfEYasyN~r~fDlanHf~E~~~DY~~~~~P~~ 269 (366)
T KOG2686|consen 190 EIEDLLLELSLFRKWSELTKSPVVFCHNDLQYGNILLLNSTKELVLIDFEYASYNPRGFDLANHFCEWAADYHTPTPPGL 269 (366)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCeeeecccccccceeeecCCCceeEEeeccccCCchhhhHHHHHHHhhccccCCCCCee
Confidence 366788899999998866788999999999999999986677899999999999999999999999999843 1
Q ss_pred -CCCCCCCCHHHHHHHHHHHHHHhcCC--CCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcC-CCCCCHHHHHHHHH
Q psy8745 95 -IDHSRYPGPEFQLSWLRTYLEEYTGS--PPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHS-DIEFDFFQYASSTY 170 (317)
Q Consensus 95 -~d~~~yp~~e~~~~fi~~YL~~y~~~--~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s-~~~fDy~~Ya~~R~ 170 (317)
++-+.||++++++.|+..|+.+.... ...+.+++.|+++++.|++++|+||+||+++|+..+ .++|||+.||+.|+
T Consensus 270 ~~~~~~~p~~e~~~~F~~sYl~~~~~~~~~~~~~ev~~L~~e~~~~~p~shlfW~LWsi~q~~~~~~i~fdy~~y~r~rf 349 (366)
T KOG2686|consen 270 KINPDLYPGEEQRQRFIESYLDSAAVKRKEPREKEVEKLLKEIRFFTPASHLFWGLWSILQALVLHKIEFDYMEYARDRF 349 (366)
T ss_pred ecchhhCCCcHHHHHHHHHHHHHhhccccCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhccccccChHHHHHHHH
Confidence 12356999999999999999987522 556789999999999999999999999999999998 89999999999999
Q ss_pred HHHHHhHhhh
Q psy8745 171 QGYVLKRDKY 180 (317)
Q Consensus 171 ~~y~~~k~el 180 (317)
..|+..|+.+
T Consensus 350 ~~y~~~k~~L 359 (366)
T KOG2686|consen 350 AVYFHLKPRL 359 (366)
T ss_pred HHHhccchhh
Confidence 9999999888
No 6
>PTZ00384 choline kinase; Provisional
Probab=100.00 E-value=1.8e-32 Score=268.64 Aligned_cols=158 Identities=27% Similarity=0.491 Sum_probs=133.8
Q ss_pred CHHHHHHHHHHHHHHHhc-------CCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCC
Q psy8745 22 GVSQLQSDWQYIETALSK-------TKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSP 94 (317)
Q Consensus 22 ~~~~L~~e~~~L~~~l~~-------~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~ 94 (317)
+...+.++++.+++.+.. ...++||||||++++|||.+ +++++|||||||++|+|+||||||||||++++.
T Consensus 198 ~~~~l~~~~~~~~~~L~~~l~~~~~~~~~~VfCHNDL~~gNIL~~--~~~l~lID~EYA~~n~~~fDLAn~f~E~~~~y~ 275 (383)
T PTZ00384 198 DYNELVQNYELFKKILNNHLNTSNSITNSVLFCHNDLFFTNILDF--NQGIYFIDFDFAGFNYVGWEIANFFVKLYIVYD 275 (383)
T ss_pred CHHHHHHHHHHHHHHHHHhhccccccccceeeeeccCCcccEEec--CCCEEEEEeccccCCchHhHHHHHHHHHhcccC
Confidence 566788888887766642 23469999999999999985 467999999999999999999999999998532
Q ss_pred --------CCCCCCCCHHHHHHHHHHHHHHhcCCC--CCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcC----CCCC
Q psy8745 95 --------IDHSRYPGPEFQLSWLRTYLEEYTGSP--PSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHS----DIEF 160 (317)
Q Consensus 95 --------~d~~~yp~~e~~~~fi~~YL~~y~~~~--~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s----~~~f 160 (317)
.+++.||+.++|..|++.||+.+.+.. +++++++.|+.+|+.|++++|+||++||++|+..+ ..++
T Consensus 276 ~~~~~~~~~~~~~~ps~e~~~~fi~~Yl~~~~~~~~~~~~~~~~~l~~~v~~~~l~sh~~W~lW~iIq~~~~~~~~~~~~ 355 (383)
T PTZ00384 276 PPTPPYFNSDDSLALSEEMKTIFVSVYLSQLLGKNVLPSDDLVKEFLQSLEIHTLGVNLFWTYWGIVMNDKPKNELSKPV 355 (383)
T ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccccCCc
Confidence 245678999999999999999876433 46789999999999999999999999999999842 2378
Q ss_pred CHHHHHHHHHHHHHHhHhhhc
Q psy8745 161 DFFQYASSTYQGYVLKRDKYL 181 (317)
Q Consensus 161 Dy~~Ya~~R~~~y~~~k~el~ 181 (317)
||+.||..|+++|++..+++.
T Consensus 356 ~f~~y~~~r~~~~~~~~~~~~ 376 (383)
T PTZ00384 356 KFEAYAKFQYNLFKNNLRKLT 376 (383)
T ss_pred hHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999998877763
No 7
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=99.94 E-value=2.1e-26 Score=216.59 Aligned_cols=112 Identities=42% Similarity=0.791 Sum_probs=98.5
Q ss_pred CCCeeeeecCCCCCCeeeeCC---CCeEEEEeeccccCCchhhhHHHHHHHhhCCC--------CCCCCCCCCHHHHHHH
Q psy8745 41 KSPVVFCHNDLLLGNIIYDET---EDKVTFIDYEYAGVNYQAFDIANHFDEFAGVS--------PIDHSRYPGPEFQLSW 109 (317)
Q Consensus 41 ~~~~v~CHnDl~~~NiL~~~~---~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~--------~~d~~~yp~~e~~~~f 109 (317)
..+.|+||||++++|||++++ ++.+.|||||||++|+|+||||++|+|++... .++++.||+.++|..|
T Consensus 176 ~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~~p~~DlA~~~~e~~~~~~~~~~~~~~~~~~~~p~~~~~~~f 255 (302)
T cd05156 176 GSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYNYRGFDIANHFCEWMYDYHDPEPPFFKIHEDKYPTEEQRLNF 255 (302)
T ss_pred CCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCCCcHHHHHHHHHHHHhhcCCCCCCccccChhhCcCHHHHHHH
Confidence 478999999999999999753 36799999999999999999999999998521 2467789999999999
Q ss_pred HHHHHHHhcC----CCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHH
Q psy8745 110 LRTYLEEYTG----SPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQ 152 (317)
Q Consensus 110 i~~YL~~y~~----~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq 152 (317)
++.|++.+.+ .+.+..+++.++.+|..|.+++|++|++||++|
T Consensus 256 ~~~Yl~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~W~lW~~~q 302 (302)
T cd05156 256 ISAYLSESLKGKNSVEEREKEVKDLLEEVEIFTPASHLFWALWGIIQ 302 (302)
T ss_pred HhccCchhcccccccCcHHHHHHHHHHHHHHHHhhhhHHHHHHHhcC
Confidence 9999998753 345678899999999999999999999999987
No 8
>KOG4720|consensus
Probab=99.88 E-value=1.5e-23 Score=196.75 Aligned_cols=95 Identities=34% Similarity=0.721 Sum_probs=86.2
Q ss_pred CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCC--CCCCcchHHHHHHHhhcc
Q psy8745 186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSN--MKTPKLWSTGKHMLSLIP 263 (317)
Q Consensus 186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~--~~~p~lw~~i~kwl~~~~ 263 (317)
.++++|+++||||+|||+|+||+||+||+|+||.|++|++|+|.++|||+||++|+++++ .++|.||.+|.+|+++++
T Consensus 130 ~afk~L~a~G~ap~Ly~tF~NGLvyefi~g~tL~p~~mr~pki~~lIAr~mak~H~~~~~g~~pkp~lw~km~~f~~lv~ 209 (391)
T KOG4720|consen 130 IAFKLLAAYGFAPKLYGTFNNGLVYEFIQGKTLEPEHMREPKIFRLIARRMAKIHSIVATGGNPKPPLWEKMRKFLQLVP 209 (391)
T ss_pred HHHHHHHHcCcChhhhheecCceEEeeecCcccChhhccChHHHHHHHHHHHHhheeccCCCCCCCcHHHHHHHHHHhcC
Confidence 678999999999999999999999999999999999999999999999999999999987 478899999999999999
Q ss_pred ccCCCchhhhhhhccccc
Q psy8745 264 RTYSNPDKQERYCSRAQS 281 (317)
Q Consensus 264 ~~f~d~~k~~~~~~~~~s 281 (317)
+.|.|+ ++++....++|
T Consensus 210 ~~f~de-~~kq~~~~~~~ 226 (391)
T KOG4720|consen 210 TSFEDE-INKQNLFDEPS 226 (391)
T ss_pred chhhcc-cchhhcccCCC
Confidence 999887 44444444444
No 9
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=99.78 E-value=2.7e-18 Score=161.36 Aligned_cols=133 Identities=26% Similarity=0.407 Sum_probs=105.5
Q ss_pred CHHHHHHHHHHHHHHHhcCCCC-eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCC
Q psy8745 22 GVSQLQSDWQYIETALSKTKSP-VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRY 100 (317)
Q Consensus 22 ~~~~L~~e~~~L~~~l~~~~~~-~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~y 100 (317)
+...+.+.+..|+..+.....+ .|+||||++++|+|.++ .++++||||||||+|+|+||||+++.|+..
T Consensus 130 ~~~~~~~~~~~l~~~l~~~~~~~~v~cH~Dl~~~N~l~t~-~~~l~LIDWEyAg~~D~~~DLA~~~~e~~~--------- 199 (269)
T COG0510 130 DNHLLRKKLKELRRALEEVPKDDLVPCHNDLNPGNLLLTD-KGGLFLIDWEYAGLNDPAFDLAALLSEYIF--------- 199 (269)
T ss_pred hhHHHHHHHHHHHHHhhhcCCCceeeecCCCCccceEEcC-CCcEEEEecccCCCccHHHHHHHHHHHhcc---------
Confidence 5667788888888888888878 99999999999999975 589999999999999999999999999763
Q ss_pred CCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhHhhh
Q psy8745 101 PGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKY 180 (317)
Q Consensus 101 p~~e~~~~fi~~YL~~y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~R~~~y~~~k~el 180 (317)
+..+.......|++.|. . +. |..+.+...+.|.+|+.+|.... .++..|+..|+.+..+..+.+
T Consensus 200 -~~~~~~~~~~~~~~~~~---~-~~--------~~~~~i~~~~~W~l~~~~~~~~~---~~~~~~~~k~~~~~~~~l~~~ 263 (269)
T COG0510 200 -NHNELEDLYSAYLEKYG---F-EA--------VLIYKILQKFLWYLWTKLQEQIL---EDFGWYDKKRLNRAIDLLENL 263 (269)
T ss_pred -chhHHHHHHHHHHHhCC---c-hh--------hHHHHHHHHhHHHHHHHHHHHhh---hhhhhhhHHHHHHHHHHHHHH
Confidence 23334556667777652 1 11 44567778899999999999986 588889988888765555444
No 10
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=99.78 E-value=1.2e-19 Score=162.91 Aligned_cols=84 Identities=45% Similarity=0.722 Sum_probs=65.5
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCC-------CC
Q psy8745 22 GVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGV-------SP 94 (317)
Q Consensus 22 ~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~-------~~ 94 (317)
.++.|.+++.++++.+...+.+.||||||++++|||++..+++++||||||||+|+|+||||++|+|+++. ..
T Consensus 121 ~~~~l~~~~~~~~~~l~~~~~~~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~n~~~fDia~~f~e~~~~~~~~~~~~~ 200 (211)
T PF01633_consen 121 DLEDLQEELEELEKLLEKSNSPLVFCHNDLNPGNILINNKDGEVKLIDFEYAGYNDRAFDIANFFCEWNFDYEQEEFFFK 200 (211)
T ss_dssp HHHHHHHHHHHHHHHHHTSCGGEEEE-S--SGGGEEETSSSSCEEE--GTT-EEEEHHHHHHHHHHHTTEETTHSSTSTE
T ss_pred CHHHHHHHHhhhhhhhhccCCCceEeeccCccccEEeccCCCeEEEecHHHHhhccchhhHHHHHHHHcCchhhhhhhhh
Confidence 57789999999999998888999999999999999994447899999999999999999999999999872 24
Q ss_pred CCCCCCCCHHH
Q psy8745 95 IDHSRYPGPEF 105 (317)
Q Consensus 95 ~d~~~yp~~e~ 105 (317)
++++.||+.++
T Consensus 201 ~~~~~yp~~~~ 211 (211)
T PF01633_consen 201 CDYSKYPTEEQ 211 (211)
T ss_dssp E-GGGS--HHH
T ss_pred hhHhhCCCccC
Confidence 67888998764
No 11
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=99.75 E-value=1.1e-17 Score=154.26 Aligned_cols=111 Identities=19% Similarity=0.301 Sum_probs=91.3
Q ss_pred CCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC
Q psy8745 41 KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGS 120 (317)
Q Consensus 41 ~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~~ 120 (317)
+.+.++||||++++|||+++ +++.|||||||++|+|+||||++++++ +.+++..|++.|.+...
T Consensus 143 ~~~~~l~H~Dl~~~Nil~~~--~~~~lIDwE~a~~gdp~~DLa~~~~~~------------~~~~~~~~l~~Y~~~~~-- 206 (256)
T TIGR02721 143 PLPLAPLHMDVHAYNLVVTP--QGLKLIDWEYASDGDIALELAAIIRAN------------DEEQQQDFVQRYCQRRR-- 206 (256)
T ss_pred CCCCeeecCCCCcCcEEEeC--CCCEEEeccccCcCCHHHHHHHHHHhC------------CHHHHHHHHHHHHHhhC--
Confidence 45789999999999999975 348999999999999999999999863 36888999999997631
Q ss_pred CCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHHHHH
Q psy8745 121 PPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQ 171 (317)
Q Consensus 121 ~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~R~~ 171 (317)
.. ..+.+..+++.|.++.+++|++|+.++...++ +-.|.+-|+....
T Consensus 207 -~~--~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~-~~~~~~~a~~~~~ 253 (256)
T TIGR02721 207 -IY--SISVLWRQVKAWQPWVDYMAALWFELRWQQTG-DPQFLELAQELRH 253 (256)
T ss_pred -Cc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHH
Confidence 11 13567889999999999999999999998875 4567776666554
No 12
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=99.74 E-value=5e-18 Score=153.65 Aligned_cols=88 Identities=53% Similarity=0.933 Sum_probs=77.3
Q ss_pred CHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCC
Q psy8745 22 GVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYP 101 (317)
Q Consensus 22 ~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp 101 (317)
..+.+.+++.+|.+.+.....+.|+||||++++|||+++.++.+.|||||||++|+|+||||++++||+++ ++|+..||
T Consensus 148 ~~~~l~~~~~~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~~~Dla~~~~e~~~~-~~~~~~~~ 226 (235)
T cd05157 148 SFEQLRDEISWLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYRAFDIANHFNEWAGF-DCDYYLYP 226 (235)
T ss_pred cHHHHHHHHHHHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCchheeHHHHHHHHcCc-cCChhhCc
Confidence 56788888889988887777889999999999999998533679999999999999999999999999865 47788899
Q ss_pred CHHHHHHHH
Q psy8745 102 GPEFQLSWL 110 (317)
Q Consensus 102 ~~e~~~~fi 110 (317)
+.++|+.|+
T Consensus 227 ~~~~~~~~~ 235 (235)
T cd05157 227 PKEEQQAFI 235 (235)
T ss_pred CHHHHHhhC
Confidence 999998885
No 13
>KOG2686|consensus
Probab=99.74 E-value=5.1e-19 Score=170.36 Aligned_cols=84 Identities=30% Similarity=0.465 Sum_probs=78.4
Q ss_pred CCCCcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCCC-CCC-cchHHHHHHHh
Q psy8745 183 TSPPSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNM-KTP-KLWSTGKHMLS 260 (317)
Q Consensus 183 ~e~~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~~-~~p-~lw~~i~kwl~ 260 (317)
+|.++|.+|+++|+||+|||+|+|||+|||||+|||+.+++++|++++.||++|+++|.+++|+ |+| .+|++|++|+.
T Consensus 91 ~Esv~fa~lSer~lGPkL~G~F~~GR~EefipSRtL~~~~i~~p~~S~~Ia~~~~~~H~~~~p~~ke~~~~~~~~~~wl~ 170 (366)
T KOG2686|consen 91 TESVMFAILSERGLGPKLYGFFSGGRFEEFIPSRTLTLADIRDPEISKRIAAKLAEYHGIEVPGPKEPRSLWERYKKWLK 170 (366)
T ss_pred hHHHHHHHHhhcCCCcceeeecCCccHhhhccccccchHhhcchhHHHHHHHHHHHhcCCcCCCCccHHHHHHHHHHHHh
Confidence 4458999999999999999999999999999999999999999999999999999999999984 888 79999999998
Q ss_pred hccccC
Q psy8745 261 LIPRTY 266 (317)
Q Consensus 261 ~~~~~f 266 (317)
.+....
T Consensus 171 ~~~~~~ 176 (366)
T KOG2686|consen 171 GAKKIK 176 (366)
T ss_pred hhhhcC
Confidence 877653
No 14
>PRK10271 thiK thiamine kinase; Provisional
Probab=99.59 E-value=6e-15 Score=131.85 Aligned_cols=117 Identities=21% Similarity=0.273 Sum_probs=92.0
Q ss_pred HHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHH
Q psy8745 30 WQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSW 109 (317)
Q Consensus 30 ~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~f 109 (317)
+..++......+.+.|+||||++++||+..+ +++.+||||||+.|+|++|||.++++ +.+++..|
T Consensus 63 ~~~~~~~~~~~~l~~~p~H~D~~~~N~~~~~--~~~~lIDwe~a~~gDp~~DLa~~~~~-------------~~~~~~~~ 127 (188)
T PRK10271 63 LKRLRKAGEPRPLRLAPLHMDVHAGNLVHSA--SGLRLIDWEYAGDGDIALELAAVWVE-------------NTEQHRQL 127 (188)
T ss_pred HHHHHhcccCCCCCeeeecCCCCCccEEEEC--CCEEEEeCCcccCCCHHHHHHHHHcC-------------CHHHHHHH
Confidence 3444444445677899999999999999975 55999999999999999999998763 35778889
Q ss_pred HHHHHHHhcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHH
Q psy8745 110 LRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASS 168 (317)
Q Consensus 110 i~~YL~~y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~ 168 (317)
++.|... ... +...+..+|+.|.+...++-.+|..++.+.++ |-.|+.-|..
T Consensus 128 l~~Y~~~---~~~---d~~~~~~~~~~W~p~~~~m~llWyev~~qq~~-d~~fl~~a~~ 179 (188)
T PRK10271 128 VNDYATR---AKI---DAAQLWRQVRRWFPWVLMLKAGWFEYRWRQTG-DQQFIRLADD 179 (188)
T ss_pred HHHHhCc---cCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cHHHHHHHHH
Confidence 9988843 112 23567778999999999999999999999885 4567655543
No 15
>PTZ00296 choline kinase; Provisional
Probab=99.42 E-value=9.9e-14 Score=138.85 Aligned_cols=80 Identities=16% Similarity=0.344 Sum_probs=74.1
Q ss_pred CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC----C---CCCCcchHHHHHH
Q psy8745 186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS----N---MKTPKLWSTGKHM 258 (317)
Q Consensus 186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~----~---~~~p~lw~~i~kw 258 (317)
.++++|+++|+||++||+|+||+|++||+|+||++.++++|.+++.||+.|++||++.. + +++|.+|.+|++|
T Consensus 161 ~v~~~ls~~gi~P~l~~~f~gg~I~efi~g~~l~~~dl~~~~~~~~iA~~L~~lH~~~~~~~~~~~f~~~p~~f~~i~~~ 240 (442)
T PTZ00296 161 EVYKTMSKYRIAPQLLNTFSGGRIEEWLYGDPLRIDDLKNPSILIGIANVLGKFHTLSRKRHLPEHWDRTPCIFKMMEKW 240 (442)
T ss_pred HHHHHHHHCCCCCceEEEeCCCEEEEeeCCccCCHHHcCCHHHHHHHHHHHHHHhcccccccCchhccCCCcHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999852 2 4789999999999
Q ss_pred Hhhcccc
Q psy8745 259 LSLIPRT 265 (317)
Q Consensus 259 l~~~~~~ 265 (317)
+..++..
T Consensus 241 ~~~~~~~ 247 (442)
T PTZ00296 241 KNQLSKY 247 (442)
T ss_pred HHHHHhh
Confidence 9998764
No 16
>PTZ00384 choline kinase; Provisional
Probab=99.42 E-value=8.9e-14 Score=136.85 Aligned_cols=78 Identities=18% Similarity=0.311 Sum_probs=71.5
Q ss_pred CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC---C---CCCCcchHHHHHHH
Q psy8745 186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS---N---MKTPKLWSTGKHML 259 (317)
Q Consensus 186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~---~---~~~p~lw~~i~kwl 259 (317)
+++++|+++|+||++||.|+||+|++||+|++|+.+++++|.+++.||++||+||.+.. | ++.|.+|.+|.+|+
T Consensus 104 ~i~~~Ls~~glgP~l~~~f~~g~l~efIeGr~l~~~dl~~p~~~~~IA~~La~lH~~~~~~~p~~~~~~p~~~~~i~~w~ 183 (383)
T PTZ00384 104 NIAKLLGDNNFGPKIIGRFGDFTIQEWVEGNTMGIDSLQNLSVLTGIASSLAKFHKRVTELVPKEWDRTPMFLTKISTWS 183 (383)
T ss_pred HHHHHHHhCCCCCeEEEecCCEEEEEEeccccCChhHhcCHHHHHHHHHHHHHHhcccccCCCccccCcchHHHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999753 2 36788999999999
Q ss_pred hhcc
Q psy8745 260 SLIP 263 (317)
Q Consensus 260 ~~~~ 263 (317)
..+.
T Consensus 184 ~~~~ 187 (383)
T PTZ00384 184 QHVE 187 (383)
T ss_pred HHHH
Confidence 7654
No 17
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=99.39 E-value=4e-12 Score=118.99 Aligned_cols=101 Identities=20% Similarity=0.232 Sum_probs=73.1
Q ss_pred CCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Q psy8745 40 TKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTG 119 (317)
Q Consensus 40 ~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~ 119 (317)
...+.++||||++++|+|+++ ++.+.|||||+|+++++.+|||..+..|+.....+ .+.+....|++.|.+.
T Consensus 171 ~~~~~~l~HgD~~~~Nil~~~-~~~~~iIDfe~a~~g~~~~Dla~~~~~~~~~~~~~----~~~~~~~~~l~gY~~~--- 242 (296)
T cd05153 171 SDLPRGVIHADLFRDNVLFDG-DELSGVIDFYFACTDAFLYDLAITLNDWCFDEDGA----LDPERAQALLAGYQAV--- 242 (296)
T ss_pred hcCCCcCCccCcCcccEEEeC-CceEEEeehhhhcCchHHHHHHHHHHHHHhCccCC----CCHHHHHHHHHHHHhc---
Confidence 356789999999999999985 34457999999999999999999998776522111 2456677888888764
Q ss_pred CCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHH
Q psy8745 120 SPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQ 152 (317)
Q Consensus 120 ~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq 152 (317)
++++++|++.|... .++..+.+.+|.+.-
T Consensus 243 ~~ls~~e~~~l~~~----~~~~a~~~~~~~~~~ 271 (296)
T cd05153 243 RPLTEAERAALPIM----LRGAALRFWLSRLYD 271 (296)
T ss_pred CCCCHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 56889998887643 333334445555543
No 18
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=99.38 E-value=2.5e-13 Score=121.88 Aligned_cols=73 Identities=33% Similarity=0.656 Sum_probs=63.1
Q ss_pred CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC--CCCCCcchHHHHHH
Q psy8745 186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS--NMKTPKLWSTGKHM 258 (317)
Q Consensus 186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~--~~~~p~lw~~i~kw 258 (317)
.++++|++.|+||++|+.|+||+|++||+|+||+++++++|.+...||+.||+||.+.. ..+.+.+|+.|++|
T Consensus 25 ~~~~~l~~~g~~p~~~~~~~~g~v~e~i~g~~l~~~~~~~~~~~~~iA~~l~~lH~~~~~~~~~~~~~~~~i~~~ 99 (211)
T PF01633_consen 25 EALKLLSEAGLGPKIIYFFENGRVEEFIEGRTLSPEDFRNPEILKRIAKLLAKLHSIPISPNSKKPDLWDRIDKY 99 (211)
T ss_dssp HHHHHHHHTTSSS-EEEEETTEEEEE--SSEE--CGGGGSHHHHHHHHHHHHHHHTHHHTTSSSS-HHHHHHHHH
T ss_pred HHHHHHHHcCCCCeEEEEcCCCcEEEEecccccChhhccChHHHHHHHHHHHHHhhcccccccCcchHHHHhhhh
Confidence 55688999999999999999999999999999999999999999999999999999987 35778899999999
No 19
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=99.37 E-value=5.9e-13 Score=128.23 Aligned_cols=89 Identities=27% Similarity=0.589 Sum_probs=80.4
Q ss_pred CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCCC-CCCcchHHHHHHHhhccc
Q psy8745 186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNM-KTPKLWSTGKHMLSLIPR 264 (317)
Q Consensus 186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~~-~~p~lw~~i~kwl~~~~~ 264 (317)
.+++.|++.|+||++++.|+||+|++||+|++|+++++++|.+...||+.|++||.+.++. +.|.+|..|++|++++.+
T Consensus 65 ~il~~l~~~gl~P~~l~~~~~G~i~~fi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~ 144 (330)
T PLN02421 65 QAIKYLSAAGFGAKLLGVFGNGMIQSFINARTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKAST 144 (330)
T ss_pred HHHHHHHhcCCCCceeEEeCCcEeehhhcCCCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhh
Confidence 4567899999999999999999999999999999999999999999999999999998774 678999999999999987
Q ss_pred -cCCCchhhhh
Q psy8745 265 -TYSNPDKQER 274 (317)
Q Consensus 265 -~f~d~~k~~~ 274 (317)
.|.++.+++.
T Consensus 145 ~~~~~~~~~~~ 155 (330)
T PLN02421 145 VKFEDPEKQKK 155 (330)
T ss_pred cccCcHHHhhh
Confidence 4777766554
No 20
>PLN02236 choline kinase
Probab=99.34 E-value=8.5e-13 Score=127.93 Aligned_cols=81 Identities=25% Similarity=0.464 Sum_probs=74.6
Q ss_pred CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCCC-CCCcchHHHHHHHhhccc
Q psy8745 186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNM-KTPKLWSTGKHMLSLIPR 264 (317)
Q Consensus 186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~~-~~p~lw~~i~kwl~~~~~ 264 (317)
.+++.|++.|+||++||.|+||+|++|++|+||+++++++|.+...||+.|++||++.+++ +.|.+|.+|++|+..+..
T Consensus 88 ~~~~~l~~~gl~P~~~~~~~~g~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~ 167 (344)
T PLN02236 88 RTFECMSRHGQGPRLLGRFPNGRVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKN 167 (344)
T ss_pred HHHHHHHHcCCCCceEEEECCceEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHh
Confidence 5667899999999999999999999999999999999999999999999999999998765 568999999999988765
Q ss_pred cC
Q psy8745 265 TY 266 (317)
Q Consensus 265 ~f 266 (317)
..
T Consensus 168 l~ 169 (344)
T PLN02236 168 LC 169 (344)
T ss_pred hc
Confidence 54
No 21
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=99.26 E-value=1.3e-10 Score=109.20 Aligned_cols=100 Identities=21% Similarity=0.274 Sum_probs=77.1
Q ss_pred CCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC
Q psy8745 41 KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGS 120 (317)
Q Consensus 41 ~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~~ 120 (317)
..+.++||||++++||++++ +.+.+||||.++++++.+|||.++..++.. ..++ +.+....|++.|.+. .
T Consensus 184 ~~~~~liHgD~~~~Nil~~~--~~i~lIDfd~~~~~~~~~Dla~~l~~~~~~-~~~~----d~~~~~~~l~gY~~~---~ 253 (313)
T TIGR02906 184 KKIRGFCHQDYAYHNILLKD--NEVYVIDFDYCTIDLPVRDLRKLIIKLMKK-NGVW----DLEKAKEIIEAYSSI---N 253 (313)
T ss_pred cCcCceEcCCCCcccEEEeC--CcEEEEECcccccCCcHHHHHHHHHHHHHh-ccCC----CHHHHHHHHHHhhcc---C
Confidence 45789999999999999975 679999999999999999999998876511 1112 234556777777764 5
Q ss_pred CCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhh
Q psy8745 121 PPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAE 154 (317)
Q Consensus 121 ~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~ 154 (317)
+++++|++.|+ .+.++++.||.+|--+...
T Consensus 254 ~L~~~e~~~l~----~~l~~p~~~~~~~~~y~~~ 283 (313)
T TIGR02906 254 PLSKEEKEVLY----IDLAFPHKFWKIGKQYYYK 283 (313)
T ss_pred CCCHHHHHHHH----HHHhChHHHHHHHHHHHhc
Confidence 78899988776 5688888888877655443
No 22
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=99.26 E-value=3.7e-11 Score=114.13 Aligned_cols=101 Identities=21% Similarity=0.306 Sum_probs=82.4
Q ss_pred CCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcC
Q psy8745 40 TKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTG 119 (317)
Q Consensus 40 ~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~ 119 (317)
...+.++||+|+.++|+|+++ ++.+.+||||+|++++|.+|||+++...+.. .+ ++.+....|++.|-+.
T Consensus 192 ~~~~~~lcHgD~~~~Nvl~~~-~~~~~iIDfd~~~~d~~~~DLa~~~~~~~~~--~~----~~~~~~~~~l~~Y~~~--- 261 (309)
T TIGR02904 192 ESWRTVLVHGKLSLSHFLYDE-TRGGYFINFEKASFASPLTDLAAFFRRSFGT--YP----QPIDEMFEWFYTYEKT--- 261 (309)
T ss_pred hhcceeeeCCCCcHHhEEEcC-CCCEEEEEhhhcccCCcHHHHHHHHHHHHhh--CC----CChHHHHHHHHHHHhc---
Confidence 457889999999999999976 4679999999999999999999988875431 12 3346667788888876
Q ss_pred CCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhh
Q psy8745 120 SPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAE 154 (317)
Q Consensus 120 ~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~ 154 (317)
++++++|.+.|+ .+.++++-||-+|--+...
T Consensus 262 ~pL~~~E~~~l~----~~L~fP~~f~~~~~~yy~~ 292 (309)
T TIGR02904 262 LPLTDEEIHLLT----SYLAYPGPFIRVIQNYTKQ 292 (309)
T ss_pred CCCCHHHHHHHH----HHHhCCHHHHHHHHHHHhc
Confidence 678999988876 4688999999999877664
No 23
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.23 E-value=5.4e-11 Score=101.46 Aligned_cols=62 Identities=40% Similarity=0.704 Sum_probs=54.2
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEE 116 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~ 116 (317)
+.++||+|++++|||++ ++++.+||||+|++++|++|||.++.++. .+.+++..|++.|-..
T Consensus 106 ~~~~~HgD~~~~Nil~~--~~~~~liDf~~a~~~~~~~Dla~~~~~~~----------~~~~~~~~~~~~y~~~ 167 (170)
T cd05151 106 DLVPCHNDLLPGNFLLD--DGRLWLIDWEYAGMNDPLFDLANFFSEAK----------LSEDQEEELLEAYFGR 167 (170)
T ss_pred CceeecCCCCcCcEEEE--CCeEEEEecccccCCChHHHHHHHHHhcC----------CCHHHHHHHHHHHhCC
Confidence 78999999999999997 46799999999999999999999988753 2467788899888764
No 24
>PRK05231 homoserine kinase; Provisional
Probab=99.22 E-value=1.6e-10 Score=109.66 Aligned_cols=101 Identities=19% Similarity=0.289 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHhc---CCCCeeeeecCCCCCCeeeeCCCCeE-EEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCC
Q psy8745 26 LQSDWQYIETALSK---TKSPVVFCHNDLLLGNIIYDETEDKV-TFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYP 101 (317)
Q Consensus 26 L~~e~~~L~~~l~~---~~~~~v~CHnDl~~~NiL~~~~~~~l-~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp 101 (317)
+.++++.+.+.+.. ...|.++||||++++|||+++ +++ .+||||+|+++++.||||..++.|+......+
T Consensus 166 l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~--~~~~~iIDf~~~~~~~~~~DlA~~~~~~~~~~~~~~---- 239 (319)
T PRK05231 166 LEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEG--DRLSGFIDFYFACNDKLLYDVAITLNDWCFEADGSL---- 239 (319)
T ss_pred HHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEEC--CceEEEEecccccCCchHHHHHHHHHHHHccCCCCc----
Confidence 34444444444442 236789999999999999974 455 69999999999999999999987775321111
Q ss_pred CHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhh
Q psy8745 102 GPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQ 135 (317)
Q Consensus 102 ~~e~~~~fi~~YL~~y~~~~~s~~ev~~l~~~v~ 135 (317)
+.+....|++.|-+. ++++++|++.|..-++
T Consensus 240 ~~~~~~~~l~gY~~~---~~Ls~~E~~~l~~~l~ 270 (319)
T PRK05231 240 DATKARALLAAYQSV---RPLTAAERAALPVMLR 270 (319)
T ss_pred CHHHHHHHHHHHhhc---CCCCHHHHHHHHHHHH
Confidence 234556666666553 5789999888775433
No 25
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=99.18 E-value=5.7e-11 Score=108.79 Aligned_cols=71 Identities=18% Similarity=0.177 Sum_probs=55.0
Q ss_pred HHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHH
Q psy8745 34 ETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTY 113 (317)
Q Consensus 34 ~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~Y 113 (317)
.+.++....+.++||||++++|||+++ ++ +.+||||+|++|+|.+|||.++.-+.. ..+++..|+..|
T Consensus 143 ~~~l~~~~~~~~~~HgD~~~~Nii~~~-~~-~~iIDwe~a~~Gdp~~Dla~~~~~~~~----------~~~~~~~~~~~y 210 (226)
T TIGR02172 143 RAFIKEVPDTSTCLHGDFQIGNLITSG-KG-TYWIDLGDFGYGNPLFDLGLLFMFCHY----------LDDDKLQAIFHM 210 (226)
T ss_pred HHHHHhCCCCCceEecCCCCCcEEEcC-CC-cEEEechhcCcCCHHHHHHHHHHhccC----------ChhHHHHHHHhc
Confidence 333434455667899999999999975 34 999999999999999999997664221 246788899888
Q ss_pred HHH
Q psy8745 114 LEE 116 (317)
Q Consensus 114 L~~ 116 (317)
+.+
T Consensus 211 ~~~ 213 (226)
T TIGR02172 211 NAE 213 (226)
T ss_pred CHH
Confidence 864
No 26
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=99.14 E-value=3.8e-10 Score=106.95 Aligned_cols=86 Identities=17% Similarity=0.297 Sum_probs=65.1
Q ss_pred CCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC
Q psy8745 41 KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGS 120 (317)
Q Consensus 41 ~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~~ 120 (317)
..+.++||||++++|+++++ ++.+.+||||+|+++++.+|||..+..|+...... .+.+....|++.|.+. .
T Consensus 184 ~~~~~l~HgD~~~~Nvl~~~-~~~~~vIDfd~~~~~~~~~DLA~~~~~~~~~~~~~----~~~~~~~~~l~gY~~~---~ 255 (307)
T TIGR00938 184 DLPRGVIHADLFPDNVLFDG-DSVKGVIDFYFACTDARAYDLAITVNAWCFDADDH----FDADHAKALIKGYHQS---R 255 (307)
T ss_pred cCCCccCCCCCCcCcEEEEC-CceEEEeecccccCcchHHHHHHHHHHHHcCCCCC----CCHHHHHHHHHHHHhc---C
Confidence 46789999999999999986 34457999999999999999999877665421111 1345667788888665 5
Q ss_pred CCCHHHHHHHHHhh
Q psy8745 121 PPSPHQLATLHWQV 134 (317)
Q Consensus 121 ~~s~~ev~~l~~~v 134 (317)
+++++|++.|..-+
T Consensus 256 ~Ls~~e~~~l~~~~ 269 (307)
T TIGR00938 256 PLTEEEKAAFPVLL 269 (307)
T ss_pred CCCHHHHHHHHHHH
Confidence 78888888776443
No 27
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.07 E-value=2.9e-10 Score=100.42 Aligned_cols=61 Identities=21% Similarity=0.329 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCC-CCeEEEEeeccccCCchhhhHHHHHHHh
Q psy8745 28 SDWQYIETALSKTKSPVVFCHNDLLLGNIIYDET-EDKVTFIDYEYAGVNYQAFDIANHFDEF 89 (317)
Q Consensus 28 ~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~-~~~l~lIDfEya~~n~~~fDiAn~~~E~ 89 (317)
+.+.++.+.+.. ..+.++||+|++++|||++++ ++.+.|||||++++++|++|||.++..|
T Consensus 159 ~~~~~~~~~~~~-~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g~~~~Dla~~~~~~ 220 (223)
T cd05154 159 RLLRWLEAHLPA-DSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLGDPLADLGWLLMYW 220 (223)
T ss_pred HHHHHHHhhCCC-CCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccCChHHHHHHHHHhc
Confidence 334444443332 257899999999999999763 3457899999999999999999998765
No 28
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=99.05 E-value=6.2e-10 Score=98.35 Aligned_cols=75 Identities=36% Similarity=0.592 Sum_probs=50.9
Q ss_pred HHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHH
Q psy8745 30 WQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSW 109 (317)
Q Consensus 30 ~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~f 109 (317)
++++.+.+.. ..+.++||+|++++|||+++++++|.|||||.+++++|.+|++.++..+.. +....+
T Consensus 153 ~~~~~~~~~~-~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~~~~~~Dla~~~~~~~~------------~~~~~~ 219 (239)
T PF01636_consen 153 LQELEALLPK-PLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGWGDPAYDLARLLRHFGE------------DQDPEF 219 (239)
T ss_dssp HHHHHHHHHC-CSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EEEETHHHHHHHHHHHTT------------HCHHHH
T ss_pred HHHHHhhhcc-CCCcEEEEeccccccceeeeccceeEEEecccceECCHHHHHHHHHHHhcc------------cCCHHH
Confidence 4444444443 678999999999999999844577789999999999999999999854321 223445
Q ss_pred HHHHHHHh
Q psy8745 110 LRTYLEEY 117 (317)
Q Consensus 110 i~~YL~~y 117 (317)
.+.|+++|
T Consensus 220 ~~~~~~~~ 227 (239)
T PF01636_consen 220 RRAYLEAY 227 (239)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66666666
No 29
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=99.02 E-value=1e-09 Score=100.14 Aligned_cols=65 Identities=29% Similarity=0.383 Sum_probs=48.9
Q ss_pred CCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHH
Q psy8745 41 KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTY 113 (317)
Q Consensus 41 ~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~Y 113 (317)
..+.|+||+|++++|||+++ ++.+.|||||+|++++|.+|||..+..... ...+.+.+..|++.|
T Consensus 160 ~~~~~l~HgD~~~~Nil~~~-~~~~~iIDwe~a~~gdp~~Dla~~~~~~~~-------~~~~~~~~~~f~~~Y 224 (244)
T cd05150 160 EEDLVVTHGDACLPNIIVDP-GKFSGFIDLGRLGVADRYQDLALAVRSLRE-------NLGGEEYAARFLDRY 224 (244)
T ss_pred cCceEEECCCCCCccEEEeC-CcEEEEEEccccccccHHHHHHHHHHHhhh-------hcCChHHHHHHHHHc
Confidence 45789999999999999986 344669999999999999999998754211 111345556666665
No 30
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=98.99 E-value=2.2e-09 Score=95.93 Aligned_cols=65 Identities=22% Similarity=0.291 Sum_probs=50.3
Q ss_pred CCeeeeecCCCCCCeeeeCCC-C---eEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q psy8745 42 SPVVFCHNDLLLGNIIYDETE-D---KVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEY 117 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~-~---~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y 117 (317)
...|+||||++++|+|+..++ + .+.+|||+++++++|++||+.++.... +.+.+....+.+++.|
T Consensus 118 ~~~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~g~p~~Dl~~~l~~~~-----------~~~~r~~~~~~ll~~Y 186 (196)
T smart00587 118 EFNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPAEDLHYFLLTSL-----------SVEIRREHFDELLKFY 186 (196)
T ss_pred CceEEeeCCCCccceeeccCCCCCccceEEEecccCCcCChHHHHHHHHHhCC-----------CHHHHHHHHHHHHHHH
Confidence 468999999999999996432 2 699999999999999999999987532 2445555555556555
No 31
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=98.92 E-value=1.6e-09 Score=97.96 Aligned_cols=82 Identities=38% Similarity=0.835 Sum_probs=72.6
Q ss_pred CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCCC-------CCCcchHHHHHH
Q psy8745 186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNM-------KTPKLWSTGKHM 258 (317)
Q Consensus 186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~~-------~~p~lw~~i~kw 258 (317)
..+..|++.|++|++++.+.+|++++||+|++++..++.++.+...+|+.||+||.+..+. +.|.+|+.+.+|
T Consensus 47 ~~~~~l~~~gl~P~v~~~~~~~~l~e~i~G~~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~ 126 (235)
T cd05157 47 RIHKLLSKHGLAPKLYATFQNGLIYEFIPGRTLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKW 126 (235)
T ss_pred HHHHHHHhCCCCCeEEEEeCCcEEEEeeCCCcCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHH
Confidence 4567888999999999999999999999999999999999999999999999999998652 456799999999
Q ss_pred HhhccccCC
Q psy8745 259 LSLIPRTYS 267 (317)
Q Consensus 259 l~~~~~~f~ 267 (317)
+..++....
T Consensus 127 ~~~~~~~~~ 135 (235)
T cd05157 127 INLVPTEFK 135 (235)
T ss_pred HHHhHHhhc
Confidence 988776543
No 32
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=98.91 E-value=3.3e-08 Score=95.77 Aligned_cols=105 Identities=22% Similarity=0.354 Sum_probs=75.4
Q ss_pred eeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCHH
Q psy8745 46 FCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGSPPSPH 125 (317)
Q Consensus 46 ~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~~~~s~~ 125 (317)
+||||++++|+++++...-+.+|||+.|++++..||||..++.|.. |.. -.......|++.|-+. ++++++
T Consensus 199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~~~~~i~DlAi~l~~~~~----d~~--~~~~~~~a~l~GY~~v---~pl~~~ 269 (331)
T COG2334 199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAGYGWFIYDLAIALNAWNG----DEA--DPRAAIAAFLEGYEEV---RPLTAA 269 (331)
T ss_pred eeecCCCccceeEcCCCCeeeEEEccccccchHHHHHHHHHHHhhc----CCC--CcHHHHHHHHHHHHhc---CCCCHH
Confidence 9999999999999863223679999999999999999999987621 111 1245566777777765 578999
Q ss_pred HHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHH
Q psy8745 126 QLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFF 163 (317)
Q Consensus 126 ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~ 163 (317)
|++.+.. +..+..+.-..|..+.....+..+++.
T Consensus 270 El~~Lp~----l~r~~a~~~~~~~~~~~~~~p~~~~~~ 303 (331)
T COG2334 270 ELELLPD----LRRLRALRLWAWRLIRWLLPPAGRLWL 303 (331)
T ss_pred HHHHHHH----HHHHHHHHHHHHHhhhhhcCCCCcchh
Confidence 8887753 344455666778777777664444443
No 33
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=98.85 E-value=1e-08 Score=101.70 Aligned_cols=61 Identities=23% Similarity=0.329 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhh
Q psy8745 26 LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFA 90 (317)
Q Consensus 26 L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~ 90 (317)
|..++..|...+.+ .+.++||||++++|||+.+ +.+.+||||+|.+|+|+||||+++.++.
T Consensus 207 L~~~~~~L~~~~~~--~~~~l~HgDl~~gni~~~~--~~~~viD~E~a~~G~~~~Dlg~~lanl~ 267 (401)
T PRK09550 207 LKLEVAKLKHKFLT--KAEALLHGDLHTGSIFVTE--EETKVIDPEFAFYGPIGFDIGTFIANLL 267 (401)
T ss_pred HHHHHHHHHHHHhc--CCCceeeccCCcccEEeeC--CCcEEEeccccccCChHHHHHHHHHHHH
Confidence 45555566554443 4678999999999999974 5699999999999999999999988753
No 34
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=98.85 E-value=2.7e-09 Score=100.48 Aligned_cols=81 Identities=31% Similarity=0.546 Sum_probs=72.2
Q ss_pred CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCCC------CCCcchHHHHHHH
Q psy8745 186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNM------KTPKLWSTGKHML 259 (317)
Q Consensus 186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~~------~~p~lw~~i~kwl 259 (317)
..+..|++.|++|++++.|++|+|++||+|++++..++.+|.+...||+.|++||++..+. ..|.+|..+.+|+
T Consensus 52 ~~~~~l~~~g~~P~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (302)
T cd05156 52 VVFARLSERNLGPKLYGIFPNGRIEEFIPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWL 131 (302)
T ss_pred HHHHHHHhCCCCCceEEEeCCCchhheeCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHH
Confidence 4567899999999999999999999999999999999999999999999999999987642 4577999999999
Q ss_pred hhccccC
Q psy8745 260 SLIPRTY 266 (317)
Q Consensus 260 ~~~~~~f 266 (317)
...+...
T Consensus 132 ~~~~~~~ 138 (302)
T cd05156 132 DLAETVI 138 (302)
T ss_pred HHhhhhh
Confidence 8877653
No 35
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.80 E-value=1.5e-08 Score=92.34 Aligned_cols=59 Identities=24% Similarity=0.425 Sum_probs=47.3
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeE-EEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHH
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKV-TFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYL 114 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l-~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL 114 (317)
.+.++||+|++++|||+++ +++ .+|||++|++++|++|||.....+ +...+..|++.|.
T Consensus 162 ~~~~l~HGD~~~~Nvlv~~--~~i~giIDw~~a~~gDp~~Dla~~~~~~------------~~~~~~~~~~~y~ 221 (235)
T cd05155 162 GPPVWFHGDLAPGNLLVQD--GRLSAVIDFGCLGVGDPACDLAIAWTLL------------DEDSRAAFRAALG 221 (235)
T ss_pred CCceEEeCCCCCCcEEEEC--CCEEEEEeCcccCcCChHHHHHHHHhcC------------CHHHHHHHHHHcC
Confidence 6789999999999999974 455 599999999999999999764421 2355677777776
No 36
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=98.77 E-value=6.8e-08 Score=91.09 Aligned_cols=63 Identities=29% Similarity=0.362 Sum_probs=50.4
Q ss_pred CCCeeeeecCCCCCCeeeeCCCCeE-EEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy8745 41 KSPVVFCHNDLLLGNIIYDETEDKV-TFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEE 116 (317)
Q Consensus 41 ~~~~v~CHnDl~~~NiL~~~~~~~l-~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~ 116 (317)
..+.++||+|++++|||+++ ++++ .+||||.|+.++|++|||..+.- -+.+....|++.|-.+
T Consensus 182 ~~~~~lvHGD~~~~Nilv~~-~~~~~gviDWe~a~iGDPa~Dla~~~~~------------~~~~~~~~~~~~Y~~~ 245 (276)
T cd05152 182 PRHTVLVHGDLHPGHILIDE-DARVTGLIDWTEAKVGDPARDFVLHYRI------------FGEAGLERLIDAYEAA 245 (276)
T ss_pred CCCCeeEeCCCCCCcEEEeC-CCCEEEEECcHhcccCCHHHHHHHHHHh------------cChHHHHHHHHHHHHc
Confidence 45679999999999999975 3555 49999999999999999976441 1346677888888865
No 37
>PRK11768 serine/threonine protein kinase; Provisional
Probab=98.76 E-value=7.8e-08 Score=92.48 Aligned_cols=119 Identities=15% Similarity=0.119 Sum_probs=73.0
Q ss_pred CCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhcCC
Q psy8745 41 KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYTGS 120 (317)
Q Consensus 41 ~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~~~ 120 (317)
..+.++||+|++++|||++ + .+.|||||.|+++++.+||+..+.... . ...+....|++.|-+. +
T Consensus 193 ~~~~~liHgD~h~~NvL~~--d-~~~iIDFDd~~~g~~i~DLa~~l~~~~--------~-~~~~~~~~~l~GY~~~---r 257 (325)
T PRK11768 193 DVRLLRLHGDCHPGNILWR--D-GPHFVDLDDARMGPAVQDLWMLLSGDR--------A-EQLMQLETLLEGYEEF---C 257 (325)
T ss_pred CCCccceecCCCchhcccc--C-CcEEEeCCCCCCCCHHHHHHHHhccCc--------c-hhHHHHHHHHHHhhcc---C
Confidence 4678999999999999994 2 588999999999999999998764210 0 1134455566666553 5
Q ss_pred CCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcC--C---CCCCHHHHHHHHHHHHHHhHh
Q psy8745 121 PPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHS--D---IEFDFFQYASSTYQGYVLKRD 178 (317)
Q Consensus 121 ~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s--~---~~fDy~~Ya~~R~~~y~~~k~ 178 (317)
+++++|++.+. -+....++... .|..-+-... + ..|.=-.|....+....++..
T Consensus 258 ~l~~~e~~~l~-~l~~lR~~~~~---~W~~~r~~d~~~~~~f~~~~~~~~w~~~~~~~~~~~~ 316 (325)
T PRK11768 258 EFDPRELALIE-PLRALRLIHYS---AWLARRWDDPAFPKAFPWFGTEDYWEQQILELREQLA 316 (325)
T ss_pred CCCHHHHHHHH-HHHHHHHHHHH---HHHhhcCCCcchhhcCCCCCCchHHHHHHHHHHHHHH
Confidence 67887766543 22333443333 3333222210 1 244555666666655444433
No 38
>PRK12396 5-methylribose kinase; Reviewed
Probab=98.72 E-value=4.6e-08 Score=96.83 Aligned_cols=62 Identities=21% Similarity=0.339 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhh
Q psy8745 25 QLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFA 90 (317)
Q Consensus 25 ~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~ 90 (317)
.|+.|+..|+..+.+ ....++|+||++|||++++ +.+++||.|+|.|||++||||+++....
T Consensus 210 ~Lk~ev~~Lk~~F~~--~~~aLlHGDlHtGSI~v~~--~~~kvIDpEFAfyGP~gFDiG~~lanll 271 (409)
T PRK12396 210 ELRLEVAKLKFSFMT--NAQALIHGDLHTGSVFVKN--DSTKVIDPEFAFYGPMGYDIGNVMANLM 271 (409)
T ss_pred HHHHHHHHHHHHHHh--cchhhccCcCCCCCEEecC--CceEEEcccccccCCcHHHHHHHHHHHH
Confidence 345556666655444 5689999999999999974 6799999999999999999999887643
No 39
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=98.71 E-value=4.2e-08 Score=91.98 Aligned_cols=68 Identities=25% Similarity=0.417 Sum_probs=52.5
Q ss_pred cCCCCeeeeecCCCCCCeeeeCCC----CeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHH
Q psy8745 39 KTKSPVVFCHNDLLLGNIIYDETE----DKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYL 114 (317)
Q Consensus 39 ~~~~~~v~CHnDl~~~NiL~~~~~----~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL 114 (317)
......|+||+|++.+|||+..++ .++.+|||+++++++|+.||+.++.... +.+.+....+.+|
T Consensus 210 ~~~~~~vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~g~p~~Dl~~fl~~s~-----------~~~~r~~~~~~ll 278 (294)
T PF02958_consen 210 SKEPFNVLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARYGSPAIDLAYFLYTSL-----------DPELRREHEDELL 278 (294)
T ss_pred ccCCceEEEcCccCHHhEeEccccccccccceeeccccccCCCcHhHHHHHHHHCC-----------CHHHHHHHHHHHH
Confidence 345678999999999999995432 2699999999999999999999987532 3455555555555
Q ss_pred HHh
Q psy8745 115 EEY 117 (317)
Q Consensus 115 ~~y 117 (317)
+.|
T Consensus 279 ~~Y 281 (294)
T PF02958_consen 279 RHY 281 (294)
T ss_pred HHH
Confidence 555
No 40
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=98.67 E-value=8.8e-08 Score=93.80 Aligned_cols=46 Identities=30% Similarity=0.408 Sum_probs=41.3
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHh
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEF 89 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~ 89 (317)
....+|||||+++||++++ +.+.+||||+|.+|+++||||.++.+.
T Consensus 190 ~~~~llHGDl~~gNi~~~~--~~~~~iD~e~~~~G~~~~Dlg~~ianL 235 (370)
T TIGR01767 190 SAETLLHGDLHSGSIFVSE--HETKVIDPEFAFYGPIGFDIGQFIANL 235 (370)
T ss_pred CcceeeeccCCcccEEEcC--CCCEEEcCcccccCchHhhHHHHHHHH
Confidence 4679999999999999964 568999999999999999999998764
No 41
>PLN02876 acyl-CoA dehydrogenase
Probab=98.57 E-value=4.3e-07 Score=97.58 Aligned_cols=114 Identities=16% Similarity=0.237 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHhcCCC---CeeeeecCCCCCCeeeeCCCCeE-EEEeeccccCCchhhhHHHHHHHhhCC---CCC--
Q psy8745 25 QLQSDWQYIETALSKTKS---PVVFCHNDLLLGNIIYDETEDKV-TFIDYEYAGVNYQAFDIANHFDEFAGV---SPI-- 95 (317)
Q Consensus 25 ~L~~e~~~L~~~l~~~~~---~~v~CHnDl~~~NiL~~~~~~~l-~lIDfEya~~n~~~fDiAn~~~E~~~~---~~~-- 95 (317)
.+.+-+.||...+..... +.++||+|++++|+|++.++++| .|||||+|+.++|.+|||.++.-|... ...
T Consensus 203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~GdPl~DLa~~~~~~~~~~~~~~~~~ 282 (822)
T PLN02876 203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQMCDVAYSCLPYIVDINLDNQQV 282 (822)
T ss_pred hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCChHHHHHHHhhhccccccCCcccc
Confidence 344445677665544322 57999999999999997544555 599999999999999999987755431 000
Q ss_pred ----CC----CCCCCHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHH
Q psy8745 96 ----DH----SRYPGPEFQLSWLRTYLEEYTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWG 149 (317)
Q Consensus 96 ----d~----~~yp~~e~~~~fi~~YL~~y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWa 149 (317)
.. ..+|+ +.++++.|.+.- |.++.... +..|..++.|-|++-.
T Consensus 283 ~~~~~~~~~~~G~p~---~~e~~~~Y~~~~-g~~~~~~~-------~~~~~~~~~~r~a~I~ 333 (822)
T PLN02876 283 GKGFEFTGIPEGIPS---LPEYLAEYCSAS-GKPWPAAN-------WKFYVAFSLFRGASIY 333 (822)
T ss_pred ccccccCcCCCCCCC---HHHHHHHHHHHh-CCCCCCcc-------cHHHHHHHHHHHHHHH
Confidence 01 13455 567888998864 44332121 3345666666655544
No 42
>PRK06149 hypothetical protein; Provisional
Probab=98.56 E-value=1e-06 Score=96.35 Aligned_cols=178 Identities=15% Similarity=0.065 Sum_probs=111.7
Q ss_pred CCCeeeeecCCCCCCeeeeCCC-Ce---EEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy8745 41 KSPVVFCHNDLLLGNIIYDETE-DK---VTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEE 116 (317)
Q Consensus 41 ~~~~v~CHnDl~~~NiL~~~~~-~~---l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~ 116 (317)
..+..+||||++..||+++++. +. ..||||+.++++++.+|||-.+..++.... ++......|++.|-+.
T Consensus 205 ~L~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~~~~~i~DLAial~~~~~~~~------~dp~~~~~~l~GY~sv 278 (972)
T PRK06149 205 ALPLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLVRTWRVADLAVTCASLLHHAG------GDPFSILPAVRAYHAV 278 (972)
T ss_pred hCcccccCCCCCcccEEEcCCCCCCcceeEEEEcccchhhhHHHHHHHHHHHHhcccC------CCHHHHHHHHHHHHhc
Confidence 4688999999999999997532 22 359999999999999999998876653111 1223345677777665
Q ss_pred hcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhHhhhcCCCCCcc--hhhhhc
Q psy8745 117 YTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPPSP--QILHRA 194 (317)
Q Consensus 117 y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~R~~~y~~~k~el~~~e~~~~--~~L~~~ 194 (317)
++++++|++.|+.- ..+-...-..|+..|+...+.+ .|........++..+.+.++.+..+ .+...-
T Consensus 279 ---rpLt~~E~~~L~~l----i~~R~~~~~~~~~~~~~~~p~n----~Y~~~~~~~~w~~l~~~~~~~~~~~~~~~~~a~ 347 (972)
T PRK06149 279 ---RPLSEAELKALWPL----VVARAAVLVASSEQQLAVDPDN----AYVRDNLAHEWEIFDVATSVPFALMEAAILAAL 347 (972)
T ss_pred ---CCCCHHHHHHHHHH----HHHHHHHHHHHHHHHhhhCCCC----hhhhhccHHHHHHHHHHHhCCHHHHHHHHHHHc
Confidence 57899999887632 3333333445666666655433 5777777777777777766544322 333334
Q ss_pred CCCCceEEEecCceEEEeec------Ccc------------CCCCCCCCcccHHHHHHHHHhhcc
Q psy8745 195 GLAPRLYAEFDNGLVYQYVR------GVT------------ITPDSIREPHIHPLVARNMARLHK 241 (317)
Q Consensus 195 ~~gp~l~g~F~nG~~e~fi~------g~t------------L~~~~l~~~~i~~~IA~~la~~H~ 241 (317)
|+.+.= .++..|-| +.. ++...+.++.....++.++++-+.
T Consensus 348 g~~~~~------~~~~~~~~~~~~~~~~~~~~~dls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (972)
T PRK06149 348 GFDPPP------PDLSGWAPLLPGLDPASVALVDLSVLSPHFSAGNWEQPGIDWRLLASAAAAGG 406 (972)
T ss_pred CCCCCc------chhhhhhhhcccccCCcceeccccccccccccCCCCCCChhhHHHHHHHhcCC
Confidence 443322 33333332 222 234455566666677777777554
No 43
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=98.54 E-value=1.6e-07 Score=86.54 Aligned_cols=79 Identities=22% Similarity=0.145 Sum_probs=67.9
Q ss_pred CcchhhhhcCCCCceEEEecCceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCCCCCCcchHHHHHHHhhccc
Q psy8745 186 PSPQILHRAGLAPRLYAEFDNGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNMKTPKLWSTGKHMLSLIPR 264 (317)
Q Consensus 186 ~~~~~L~~~~~gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~~~~p~lw~~i~kwl~~~~~ 264 (317)
..++.|++.|++|++++.+++|+|++||+|++++..++.++.....+|+.|+++|++..++....++..+.+|...+..
T Consensus 43 ~~l~~l~~~g~~P~~i~~~~~~~v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~ 121 (256)
T TIGR02721 43 QILQALSALGLAPKPILVNEHWLLVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDP 121 (256)
T ss_pred HHHHHHHhcCCCCceEEEeCCEEEEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccc
Confidence 4456788899999999999999999999999999999999999999999999999987765444567788888766654
No 44
>PRK06148 hypothetical protein; Provisional
Probab=98.54 E-value=8e-07 Score=97.53 Aligned_cols=129 Identities=14% Similarity=0.059 Sum_probs=86.9
Q ss_pred CCCeeeeecCCCCCCeeeeCCC-CeEE-EEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhc
Q psy8745 41 KSPVVFCHNDLLLGNIIYDETE-DKVT-FIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYT 118 (317)
Q Consensus 41 ~~~~v~CHnDl~~~NiL~~~~~-~~l~-lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~ 118 (317)
..|..+||||+++.|||++++. +++. ||||+.++++++.+|||..+.-++... . ...+....|++.|-+.
T Consensus 200 ~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~~~~v~DLAialay~~~~~---~---~p~~~~~a~laGY~sv-- 271 (1013)
T PRK06148 200 ALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVHAPRICEVAIAAAYAILDH---P---DPIGAAAALVAGYHAV-- 271 (1013)
T ss_pred cCCcceECCCCCcccEEEcCCCCcceEEEEECcccccccHHHHHHHHHHHHhcCC---C---ChHHHHHHHHHHHhhc--
Confidence 4678899999999999997632 2566 999999999999999999875333211 0 1123455788888876
Q ss_pred CCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCHHHHHHHHHHHHHHhHhhhcCCCCC
Q psy8745 119 GSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDFFQYASSTYQGYVLKRDKYLGTSPP 186 (317)
Q Consensus 119 ~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy~~Ya~~R~~~y~~~k~el~~~e~~ 186 (317)
++++++|++.|+. +..+-...-.+|+..++...+.+ .|...-....+...+.+.++.+.
T Consensus 272 -~pLt~~E~~~L~~----li~~R~~~s~~~~~~~~~~~P~n----~Y~~~~~~~~w~~l~~~~~~~~~ 330 (1013)
T PRK06148 272 -YPLQAQELDLLFD----LIRMRLAVSVTNSASRREQTPDN----PYLAISEAPAWRLLERLDAMNPR 330 (1013)
T ss_pred -CCCCHHHHHHHHH----HHHHHHHHHHHHHHHhhhcCCCC----hhhhhccHHHHHHHHHHHhCCHH
Confidence 5789999888763 23333334446666666665544 46555555566666666555553
No 45
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=98.43 E-value=8.3e-07 Score=72.16 Aligned_cols=45 Identities=42% Similarity=0.673 Sum_probs=41.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHh
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEF 89 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~ 89 (317)
.++||+|++++||++++ .+.+.+|||+.+.++++.+|++.+++-+
T Consensus 108 ~~i~H~Dl~~~Nil~~~-~~~~~l~Df~~~~~~~~~~d~~~~~~~~ 152 (155)
T cd05120 108 LVLCHGDLHPGNILVDD-GKILGIIDWEYAGYGPPAFDLAAALLFN 152 (155)
T ss_pred eEEEecCCCcceEEEEC-CcEEEEEecccccCCChHHHHHHHHHHh
Confidence 68999999999999986 6889999999999999999999998754
No 46
>PLN02756 S-methyl-5-thioribose kinase
Probab=98.38 E-value=1.3e-06 Score=86.99 Aligned_cols=60 Identities=22% Similarity=0.349 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHH
Q psy8745 25 QLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDE 88 (317)
Q Consensus 25 ~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E 88 (317)
.|+.++..|+..+.+ ....++|+||++|||++++ ++..+||-|+|-|||++||||.++..
T Consensus 213 ~L~~~v~~Lk~~f~~--~~~~L~HGDl~~g~i~~~~--~~~~~id~ef~~~g~~~~d~g~~~~~ 272 (418)
T PLN02756 213 ILKLEIAELKSMFCE--RAQALVHGDLHTGSVMVTP--DSTQVIDPEFAFYGPMGFDIGAFLGN 272 (418)
T ss_pred HHHHHHHHHHHHHHh--cccceeecCCCCCcEEEcC--CCceEecchhhccCchHHhHHHHHhh
Confidence 455666666655444 4579999999999999975 56999999999999999999997664
No 47
>PF07914 DUF1679: Protein of unknown function (DUF1679); InterPro: IPR012877 This region is found in a number of Caenorhabditis elegans and Caenorhabditis briggsae proteins, in one case (Q19034 from SWISSPROT) as a repeat. In many of the family members, this region is associated with the CHK region described by SMART as being found in zinc finger-C4 and HLH domain-containing kinases. In fact, one member of this family (Q9GUC1 from SWISSPROT) is annotated as being a member of the nuclear hormone receptor family, and contains regions typical of such proteins (IPR000536 from INTERPRO, IPR008946 from INTERPRO, and IPR001628 from INTERPRO).
Probab=98.38 E-value=2.8e-06 Score=84.74 Aligned_cols=82 Identities=26% Similarity=0.270 Sum_probs=61.6
Q ss_pred CCCeeeeecCCCCCCeeeeCCCC---eEE-EEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy8745 41 KSPVVFCHNDLLLGNIIYDETED---KVT-FIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEE 116 (317)
Q Consensus 41 ~~~~v~CHnDl~~~NiL~~~~~~---~l~-lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~ 116 (317)
+.+.|+||+||+..|||++.+++ .+. +|||..+..+.|+.||+..++-.+ +.+.|+.--+.+|+.
T Consensus 265 G~~~VL~HGDLw~~NiLw~k~~~g~~~l~AIIDwQ~vh~G~~~eDl~Rll~~~l-----------S~edRR~~~~~lL~~ 333 (414)
T PF07914_consen 265 GIKPVLVHGDLWSSNILWDKDSDGKLKLKAIIDWQCVHRGSPAEDLARLLVSCL-----------SGEDRREHTEELLEY 333 (414)
T ss_pred CCCcceecCCccHHheeeecCCchhHHHHHHHHHHHhhcCchHHHHHHHHHhcC-----------CHHHHHHHHHHHHHH
Confidence 55889999999999999986443 344 999999999999999999988543 355666655666655
Q ss_pred hc-----------CCCCCHHHHHHHHHh
Q psy8745 117 YT-----------GSPPSPHQLATLHWQ 133 (317)
Q Consensus 117 y~-----------~~~~s~~ev~~l~~~ 133 (317)
|. ..+.|-+++...|..
T Consensus 334 Yy~~f~~~l~~~~~~PfT~eqL~~sY~l 361 (414)
T PF07914_consen 334 YYDTFTEALEDGGKAPFTLEQLKDSYRL 361 (414)
T ss_pred HHHHHHHHHhccCCCCccHHHHHHHHHH
Confidence 53 245666777776653
No 48
>PRK10593 hypothetical protein; Provisional
Probab=98.35 E-value=1.4e-06 Score=82.92 Aligned_cols=70 Identities=14% Similarity=0.293 Sum_probs=51.5
Q ss_pred HHHHHhcCCCCeeeeecCCCCCCeeeeCCCCe-EEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHH
Q psy8745 33 IETALSKTKSPVVFCHNDLLLGNIIYDETEDK-VTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLR 111 (317)
Q Consensus 33 L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~-l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~ 111 (317)
+.+.|.....+.++||+|++++|+|++...+. ..+||+.-+.|+++-+||+..+. .+ ....|++
T Consensus 182 l~~~L~~~~~~psLlHGDlw~gNvl~~~~~~~i~~liDPa~~~~g~rE~DLa~~~~--~~-------------f~~~f~~ 246 (297)
T PRK10593 182 LPALFEGFNDNCVLVHGNFTLRSMLKDPRSDQLLAMLNPGLMLWAPREYELFRLMD--NG-------------LAEQLLW 246 (297)
T ss_pred chhhhccCCCCCeeEeCCCCcccEEECCCCCceEEEECchHhCCCCHHHhHHHhhc--CC-------------ccHHHHH
Confidence 33444444456799999999999999753344 78999999999999999987641 11 1236788
Q ss_pred HHHHHh
Q psy8745 112 TYLEEY 117 (317)
Q Consensus 112 ~YL~~y 117 (317)
.|.+.+
T Consensus 247 ~Y~~~~ 252 (297)
T PRK10593 247 RYLQKA 252 (297)
T ss_pred HHHHhC
Confidence 888875
No 49
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=98.22 E-value=3.8e-06 Score=81.16 Aligned_cols=61 Identities=23% Similarity=0.269 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHH
Q psy8745 25 QLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHF 86 (317)
Q Consensus 25 ~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~ 86 (317)
.+...+.|++........+.++.|+|++++|||+++ ++.+-|||||.++.++|..|++.++
T Consensus 179 ~~~~~~~Wl~~~~p~~~~~~~lvHGD~~~gNlii~~-~~~~gVlDwe~~~lGDP~~Dl~~~~ 239 (321)
T COG3173 179 LADRLIKWLEANRPPWAGPPVLVHGDYRPGNLIIDP-GRPTGVLDWELATLGDPLEDLAIIC 239 (321)
T ss_pred hHHHHHHHHHhcCCCcCCCceeeeCCcccCCEEEeC-CCeeEEEeccccccCCcHHHHHHHH
Confidence 344446777776555678899999999999999986 4558899999999999999999986
No 50
>TIGR02905 spore_yutH spore coat protein YutH. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YutH, are found only in the family Bacillaceae from among the endospore-forming members of the Firmicutes branch of the Bacteria.
Probab=98.19 E-value=6.4e-06 Score=78.93 Aligned_cols=96 Identities=14% Similarity=0.139 Sum_probs=72.2
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhh-CCCCCCCCCCCCHHHHHHHHHHHHHHhcCC
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFA-GVSPIDHSRYPGPEFQLSWLRTYLEEYTGS 120 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~-~~~~~d~~~yp~~e~~~~fi~~YL~~y~~~ 120 (317)
...++||+|+..+|+| . ++++.+|+||++ +++|..||++++...+ .... + +-+.-..+|+.|-+. .
T Consensus 187 ~~~~lCH~d~~~hn~l-~--~~~~~~i~~d~~-~D~~~~DL~~firk~~~k~~~--~----~~~~~~~~l~~Y~~~---~ 253 (313)
T TIGR02905 187 DSGTICHERFGETTWL-E--RGGLIKPPTEWV-YDHPARDLAEWIRERYMGEIR--Q----NQRAIASFLQEYEQA---A 253 (313)
T ss_pred ccCccccCccCccccc-c--CCCeEecccccc-cccchhHHHHHHHHHHHHhcc--c----cHHHHHHHHHHhhhc---C
Confidence 4569999999999987 3 477999999955 9999999999999854 2111 1 134556677777765 5
Q ss_pred CCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhh
Q psy8745 121 PPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAE 154 (317)
Q Consensus 121 ~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~ 154 (317)
+++++|.+.|+ .+.++++-||-+=--+...
T Consensus 254 pL~~~e~~~l~----~~L~FP~~fwk~~~~Yy~~ 283 (313)
T TIGR02905 254 PLTPFSWRLMY----ARLLFPLHYFETIENYYIA 283 (313)
T ss_pred CCCHHHHHHHH----HHHcCcHHHHHHHHHHHhC
Confidence 78999999887 4688999998876555543
No 51
>COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases [General function prediction only]
Probab=97.82 E-value=0.00014 Score=69.68 Aligned_cols=106 Identities=22% Similarity=0.345 Sum_probs=71.5
Q ss_pred CCCeeeeecCCCCCCeeeeCC---CCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q psy8745 41 KSPVVFCHNDLLLGNIIYDET---EDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEY 117 (317)
Q Consensus 41 ~~~~v~CHnDl~~~NiL~~~~---~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y 117 (317)
..+.|+||+|.++-|||+... .+++-+|||.-|.++|.+||++..+... ..+ + +++.....+..|+.+.
T Consensus 197 ~~~~vlvhRDfh~~NLmw~~~~~g~~rvGvlDFQDA~iGP~aYDvasL~~DA-rvt---~----~pe~~~~~l~rY~~~r 268 (351)
T COG3178 197 AQPKVLVHRDFHSRNLMWTADRAGADRVGVLDFQDALIGPIAYDVASLLRDA-RVT---W----SPERELALLDRYWAAR 268 (351)
T ss_pred cCCceeeeccccCccceecCCccCCCCCceeehhhhhcCcchhhHHHHHhhc-ccc---C----CHHHHHHHHHHHHHhh
Confidence 578999999999999999642 2489999999999999999999988752 211 2 3677788999999886
Q ss_pred c--CCCCCHHHHHHHHHhhhhhhhhhHH-HHHHHHHHHhhcCC
Q psy8745 118 T--GSPPSPHQLATLHWQVQQFSPVAHC-FWTIWGLVQAEHSD 157 (317)
Q Consensus 118 ~--~~~~s~~ev~~l~~~v~~~~l~shl-~W~lWaliq~~~s~ 157 (317)
. |.+.++ ..++.....+..--|+ .=++|+-+-...++
T Consensus 269 ~~~g~p~d~---~~Flra~~~MgaQR~~KvlGIFaRL~~RDGK 308 (351)
T COG3178 269 RAAGLPFDE---AAFLRAYAWMGAQRHLKVLGIFARLYYRDGK 308 (351)
T ss_pred hhcCCCcCH---HHHHHHHHHHHHHHHhHHHHHhhhhhhccCC
Confidence 4 222222 3333222222222222 34677766666554
No 52
>COG4857 Predicted kinase [General function prediction only]
Probab=97.76 E-value=9.3e-05 Score=70.52 Aligned_cols=59 Identities=27% Similarity=0.317 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHH
Q psy8745 26 LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDE 88 (317)
Q Consensus 26 L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E 88 (317)
|+-|+..|+..+.. ....+||+||+.|.|++++ ....+||=|+|.|||-+||||+++..
T Consensus 212 lkvea~kLk~~F~~--~aetLiHGDLHsGSIfvte--~etkvIDPEFaFYGPmafDiG~~iaN 270 (408)
T COG4857 212 LKVEAQKLKHKFMA--YAETLIHGDLHSGSIFVTE--KETKVIDPEFAFYGPMAFDIGMLIAN 270 (408)
T ss_pred hhhhHHHHHHHHHH--HhHHHhccccccCcEEeec--CcceeeCccccccCcchhhHHHHHHH
Confidence 44445555554433 3457999999999999975 66899999999999999999998875
No 53
>PRK14879 serine/threonine protein kinase; Provisional
Probab=97.70 E-value=0.00013 Score=64.39 Aligned_cols=83 Identities=20% Similarity=0.247 Sum_probs=53.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCC--HHHHHHHHHHHHHHhcCCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPG--PEFQLSWLRTYLEEYTGSP 121 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~--~e~~~~fi~~YL~~y~~~~ 121 (317)
..++|+|++|+|||++ ++.+.+|||+.+....+.+|.+.-+..+... . ...+|. .+....|+..|...+ .
T Consensus 114 ~~i~H~Dl~p~Nil~~--~~~~~liDf~~a~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~f~~gY~~~~---~ 185 (211)
T PRK14879 114 AGIIHGDLTTSNMILS--GGKIYLIDFGLAEFSKDLEDRAVDLHVLLRS--L-ESTHPDWAEELFEAFLEGYREVM---G 185 (211)
T ss_pred CCcccCCCCcccEEEE--CCCEEEEECCcccCCCcHHhhhccHHHHHHH--h-hccCcchHHHHHHHHHHHHHHhh---c
Confidence 4689999999999997 4789999999999999998887644332210 0 001232 244556677776643 2
Q ss_pred CCHHHHHHHHHhh
Q psy8745 122 PSPHQLATLHWQV 134 (317)
Q Consensus 122 ~s~~ev~~l~~~v 134 (317)
.+.+++...+..+
T Consensus 186 ~~~~~~~~~~~~i 198 (211)
T PRK14879 186 EKAEEVLERVKEI 198 (211)
T ss_pred ccHHHHHHHHHHH
Confidence 3445555444443
No 54
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=97.67 E-value=0.0001 Score=64.61 Aligned_cols=41 Identities=29% Similarity=0.369 Sum_probs=36.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHH
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHF 86 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~ 86 (317)
..++|+|++++||+++ ++++.+|||+.+....+..|.+.-+
T Consensus 109 ~gi~H~Dl~~~Nil~~--~~~~~liDfg~a~~~~~~~~~~~~~ 149 (199)
T TIGR03724 109 AGIVHGDLTTSNIIVR--DDKLYLIDFGLGKYSDEIEDKAVDL 149 (199)
T ss_pred CCeecCCCCcceEEEE--CCcEEEEECCCCcCCCcHHhhhchH
Confidence 4689999999999997 5789999999999999998887544
No 55
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=97.44 E-value=0.00047 Score=61.98 Aligned_cols=64 Identities=22% Similarity=0.225 Sum_probs=44.3
Q ss_pred CeeeeecCCCCCCeeeeCCC--CeEEEEeeccccCCc-----hhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHH
Q psy8745 43 PVVFCHNDLLLGNIIYDETE--DKVTFIDYEYAGVNY-----QAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTY 113 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~--~~l~lIDfEya~~n~-----~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~Y 113 (317)
...++|+||+++|||++.++ .++++||+|-+.... +.-||+.+...... . .-+.++...|++.|
T Consensus 136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~~~~~~~~~dL~~L~rs~~~---~----~~~~~d~~~fl~~Y 206 (206)
T PF06293_consen 136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRPSSRRWRAKDLARLLRSLLR---S----GWSERDRQRFLRGY 206 (206)
T ss_pred HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCCCChHHHHHhHHHHHHhccc---c----CCCHHHHHHHHhhC
Confidence 46899999999999998632 269999999988877 45566665443211 1 12456666777665
No 56
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=97.37 E-value=0.00031 Score=66.95 Aligned_cols=75 Identities=17% Similarity=0.282 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHH
Q psy8745 28 SDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQL 107 (317)
Q Consensus 28 ~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~ 107 (317)
+-++.+.+.+.....+.+++|+||+.||++.+. ++..+|||=- |-|+++-+|||.. +. + ..+ -.
T Consensus 172 ~l~~~~~~~l~~~~~~PsLlHGDLW~GN~~~~~-~g~p~l~DPa-~yygh~E~DLam~--~l--f-----ggf-----~~ 235 (288)
T PF03881_consen 172 RLVERLPSLLPGREPKPSLLHGDLWSGNVGFDA-DGEPVLFDPA-CYYGHREVDLAMT--RL--F-----GGF-----PD 235 (288)
T ss_dssp HHHHHHHHCCTTS----EEE-SS-SGGGEEEET-TE-EEE-S----EEE-CHHHHHHH--CC--C-----STT-----HH
T ss_pred HHHHHHHHHhcCCCCCceeeEcCccccceeecC-CCCceeeccc-cccCchHhhhhhh--hh--h-----CCC-----CH
Confidence 333445555554556779999999999999987 4779999987 8899999999963 11 1 111 24
Q ss_pred HHHHHHHHHhc
Q psy8745 108 SWLRTYLEEYT 118 (317)
Q Consensus 108 ~fi~~YL~~y~ 118 (317)
.|++.|.+.+.
T Consensus 236 ~f~~~Y~~~~P 246 (288)
T PF03881_consen 236 EFYDAYQEHYP 246 (288)
T ss_dssp HHHHHHHHHS-
T ss_pred HHHHHHHhcCC
Confidence 68899998863
No 57
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=97.30 E-value=0.00036 Score=59.14 Aligned_cols=59 Identities=19% Similarity=0.396 Sum_probs=51.3
Q ss_pred CcchhhhhcCCCCceEEEec--CceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC
Q psy8745 186 PSPQILHRAGLAPRLYAEFD--NGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS 244 (317)
Q Consensus 186 ~~~~~L~~~~~gp~l~g~F~--nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~ 244 (317)
..+..|+..++.|++++.+. +++|.+||+|+++...+..++.+...+|+.|+++|....
T Consensus 44 ~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~l~~~l~~LH~~~~ 104 (170)
T cd05151 44 ENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTEDFSDPENLEKIAKLLKKLHSSPL 104 (170)
T ss_pred HHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCccccccccCHHHHHHHHHHHHHHhCCCC
Confidence 34456777789999999998 899999999999987777888899999999999998764
No 58
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.09 E-value=0.003 Score=57.01 Aligned_cols=68 Identities=24% Similarity=0.335 Sum_probs=47.8
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHH----HHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHHhc
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIAN----HFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEEYT 118 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn----~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~y~ 118 (317)
...+||+||.++||++.+ ++++||||-.+..+.-.-|.|- ++... .-+++..++....|++.|.+.+.
T Consensus 110 ~~givHGDLTtsNiIl~~--~~i~~IDfGLg~~s~~~Ed~aVDl~Vleral------~sth~~~e~l~~~f~~gY~~~~~ 181 (204)
T COG3642 110 KAGIVHGDLTTSNIILSG--GRIYFIDFGLGEFSDEVEDKAVDLHVLERAL------ESTHEKAEELFAAFLEGYREEFG 181 (204)
T ss_pred hcCeecCCCccceEEEeC--CcEEEEECCcccccccHHhhhchHHHHHHHH------HhccccHHHHHHHHHHHHHHHhc
Confidence 368999999999999974 5699999999988866555553 33321 11223345666778888887764
No 59
>PF04655 APH_6_hur: Aminoglycoside/hydroxyurea antibiotic resistance kinase; InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=97.09 E-value=0.004 Score=58.37 Aligned_cols=53 Identities=25% Similarity=0.198 Sum_probs=42.5
Q ss_pred HHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHh
Q psy8745 35 TALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEF 89 (317)
Q Consensus 35 ~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~ 89 (317)
+.|-....+.++.|+||+.+|||... ......||=.-.- ++|+||++++|++.
T Consensus 151 ~~Ll~~~~~~~lLHGDLH~~NIL~~~-~~~WlaIDPkgl~-Gdp~yd~a~~l~n~ 203 (253)
T PF04655_consen 151 RELLASPGEEVLLHGDLHHGNILAAG-RRGWLAIDPKGLV-GDPAYDLAPLLRNP 203 (253)
T ss_pred HHHhcCCCcceeeccccchHhhhccC-CCCceEeCCcccc-cccccCHHHHHhCc
Confidence 33434556789999999999999865 4678899987665 99999999998853
No 60
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=96.88 E-value=0.0013 Score=67.32 Aligned_cols=41 Identities=24% Similarity=0.314 Sum_probs=36.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHH
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHF 86 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~ 86 (317)
..++|+|++|.|||++ ++.+++|||+.|...++..|++..+
T Consensus 447 ~giiHrDlkp~NILl~--~~~~~liDFGla~~~~~~~d~a~~l 487 (535)
T PRK09605 447 AGIVHGDLTTSNFIVR--DDRLYLIDFGLGKYSDLIEDKAVDL 487 (535)
T ss_pred CCCccCCCChHHEEEE--CCcEEEEeCcccccCCchHhhhhhH
Confidence 4689999999999994 5789999999999999999998855
No 61
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=96.75 E-value=0.0016 Score=59.61 Aligned_cols=78 Identities=15% Similarity=0.310 Sum_probs=59.0
Q ss_pred CcchhhhhcCC-CCceEEEecC----ceEEEeecCcc-----CCCCCCCCcccHHHHHHHHHhhcccCCCC-CCCcchHH
Q psy8745 186 PSPQILHRAGL-APRLYAEFDN----GLVYQYVRGVT-----ITPDSIREPHIHPLVARNMARLHKVHSNM-KTPKLWST 254 (317)
Q Consensus 186 ~~~~~L~~~~~-gp~l~g~F~n----G~~e~fi~g~t-----L~~~~l~~~~i~~~IA~~la~~H~~~~~~-~~p~lw~~ 254 (317)
..+..|...|+ .|+.++.-.. |++.++|+|.+ +.......+.+...+|+.|+++|.+.++. ..|..+..
T Consensus 44 ~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~ 123 (226)
T TIGR02172 44 DASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEK 123 (226)
T ss_pred HHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHH
Confidence 55567888999 7999988766 99999999985 33333334568899999999999986653 45567888
Q ss_pred HHHHHhhcc
Q psy8745 255 GKHMLSLIP 263 (317)
Q Consensus 255 i~kwl~~~~ 263 (317)
++++++...
T Consensus 124 ~~~~l~~~~ 132 (226)
T TIGR02172 124 IRKFIEEKD 132 (226)
T ss_pred HHHHHHhcc
Confidence 888886544
No 62
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=96.72 E-value=0.0083 Score=56.63 Aligned_cols=66 Identities=20% Similarity=0.256 Sum_probs=47.0
Q ss_pred CeeeeecCCCCCCeeeeC------CCCeEEEEeeccccC------CchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHH
Q psy8745 43 PVVFCHNDLLLGNIIYDE------TEDKVTFIDYEYAGV------NYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWL 110 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~------~~~~l~lIDfEya~~------n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi 110 (317)
...++|+||+++|||++. .+..++|||+|-+.. ..+.-|++.+...... . .-+......|+
T Consensus 156 ~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~~~~~~~~~r~~dL~~L~~s~~~---~----~ls~~d~~~fl 228 (268)
T PRK15123 156 AAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQIRARVPRRWRDKDLAGLYFSAMD---I----GLTQRDILRFL 228 (268)
T ss_pred HCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccccCCCChHHHHHHHHHHHHHhcc---c----CCCHHHHHHHH
Confidence 468999999999999974 145799999998732 3556888887654321 1 12466677788
Q ss_pred HHHHH
Q psy8745 111 RTYLE 115 (317)
Q Consensus 111 ~~YL~ 115 (317)
..|..
T Consensus 229 ~~Y~~ 233 (268)
T PRK15123 229 RVYFG 233 (268)
T ss_pred HHHhC
Confidence 87775
No 63
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=96.59 E-value=0.012 Score=54.29 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=29.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ 78 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~ 78 (317)
..++|+|++|+|||++. ++.++||||+.+....+
T Consensus 161 ~GI~HrDlkp~NILv~~-~~~v~LIDfg~~~~~~~ 194 (239)
T PRK01723 161 AGVYHADLNAHNILLDP-DGKFWLIDFDRGELRTP 194 (239)
T ss_pred CCCCCCCCCchhEEEcC-CCCEEEEECCCcccCCC
Confidence 46899999999999976 56899999998887654
No 64
>PRK12274 serine/threonine protein kinase; Provisional
Probab=96.59 E-value=0.0063 Score=55.90 Aligned_cols=35 Identities=26% Similarity=0.305 Sum_probs=29.2
Q ss_pred CeeeeecCC-CCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745 43 PVVFCHNDL-LLGNIIYDETEDKVTFIDYEYAGVNYQ 78 (317)
Q Consensus 43 ~~v~CHnDl-~~~NiL~~~~~~~l~lIDfEya~~n~~ 78 (317)
...++|+|| .++|||+++ ++.++||||..|....+
T Consensus 109 ~~GIvHrDL~kp~NILv~~-~g~i~LIDFG~A~~~~~ 144 (218)
T PRK12274 109 RCGVAHNDLAKEANWLVQE-DGSPAVIDFQLAVRGNP 144 (218)
T ss_pred HCcCccCCCCCcceEEEcC-CCCEEEEECCCceecCC
Confidence 347999999 799999975 57899999999886554
No 65
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=96.35 E-value=0.0042 Score=54.79 Aligned_cols=31 Identities=32% Similarity=0.296 Sum_probs=27.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|++|+||+++ +++++||||..|..-
T Consensus 137 ~givHrDlkP~NIll~--~~~~~liDFG~a~~~ 167 (190)
T cd05145 137 AGLVHGDLSEYNILYH--DGKPYIIDVSQAVEL 167 (190)
T ss_pred CCEecCCCChhhEEEE--CCCEEEEEcccceec
Confidence 5899999999999997 478999999988753
No 66
>PRK09902 hypothetical protein; Provisional
Probab=96.31 E-value=0.016 Score=53.15 Aligned_cols=63 Identities=16% Similarity=0.026 Sum_probs=46.2
Q ss_pred CeeeeecCCCCCCeeeeCCCCe--EEEEeeccccCCc-----hhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHH
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDK--VTFIDYEYAGVNY-----QAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLE 115 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~--l~lIDfEya~~n~-----~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~ 115 (317)
...++|+|+++.||+++. +++ +.|||||=+.... ..-||+.+.....+ .++.++..|+..|+.
T Consensus 146 ~~Gv~Hgdly~khIll~~-~g~~~v~lIDlEk~r~~l~~~~~~~~Dl~~l~r~~~~---------~s~~~~~~~~~~y~~ 215 (216)
T PRK09902 146 SVNRQHGCCYVRHIYVKT-EGKAEAGFLDLEKSRRRLRRDKAINHDFRQLEKYLEP---------IPKADWEQVKAYYYA 215 (216)
T ss_pred HCCCcCCCCCHhheeecC-CCCeeEEEEEhhccchhhhhhhhhHhHHHHHHHhccC---------CCHHHHHHHHHHHhc
Confidence 468999999999999974 345 9999999876544 46688776543111 246778888888873
No 67
>COG3570 StrB Streptomycin 6-kinase [Defense mechanisms]
Probab=96.28 E-value=0.015 Score=53.49 Aligned_cols=47 Identities=30% Similarity=0.319 Sum_probs=38.2
Q ss_pred CCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHH
Q psy8745 40 TKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDE 88 (317)
Q Consensus 40 ~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E 88 (317)
....+++.|+||+.+|||-.+ .....+||=--. ++.++||.||.||+
T Consensus 157 ~p~di~pLHGDlHH~Nild~~-~rGWlvIDPkgl-~Gdrg~D~ANlf~N 203 (274)
T COG3570 157 TPRDIRPLHGDLHHGNILDGD-RRGWLVIDPKGL-IGDRGFDYANLFCN 203 (274)
T ss_pred CccccccCcccccccccccCC-cCceEEEccccc-cCccccchHhhhcC
Confidence 355789999999999998754 346889997554 48999999999985
No 68
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=96.09 E-value=0.0048 Score=54.84 Aligned_cols=29 Identities=28% Similarity=0.391 Sum_probs=25.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|+|||+++ +.++||||-.|.
T Consensus 137 ~giiHrDlkP~NIli~~--~~v~LiDFG~a~ 165 (190)
T cd05147 137 CRLVHADLSEYNLLYHD--GKLYIIDVSQSV 165 (190)
T ss_pred CCcccCCCCHHHEEEEC--CcEEEEEccccc
Confidence 46999999999999973 789999998765
No 69
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=95.96 E-value=0.007 Score=52.29 Aligned_cols=29 Identities=38% Similarity=0.371 Sum_probs=25.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|+||+++ ++.+.+|||..|.
T Consensus 134 ~~ivH~Dl~p~Nili~--~~~~~liDfg~a~ 162 (187)
T cd05119 134 AGLVHGDLSEYNILVD--DGKVYIIDVPQAV 162 (187)
T ss_pred cCcCcCCCChhhEEEE--CCcEEEEECcccc
Confidence 5689999999999998 5789999998775
No 70
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=95.80 E-value=0.0098 Score=54.05 Aligned_cols=60 Identities=17% Similarity=0.117 Sum_probs=48.6
Q ss_pred CcchhhhhcCCCCceEEEecC----ceEEEeecCccCCCCC--CCCcccHHHHHHHHHhhcccCCC
Q psy8745 186 PSPQILHRAGLAPRLYAEFDN----GLVYQYVRGVTITPDS--IREPHIHPLVARNMARLHKVHSN 245 (317)
Q Consensus 186 ~~~~~L~~~~~gp~l~g~F~n----G~~e~fi~g~tL~~~~--l~~~~i~~~IA~~la~~H~~~~~ 245 (317)
..+..|++....|++++...+ +.|++||+|++|+... ...+.+...+|+.|+++|.+..+
T Consensus 43 ~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~ 108 (244)
T cd05150 43 ERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVA 108 (244)
T ss_pred HHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcc
Confidence 445667777889999999874 7999999999998654 44557888999999999998653
No 71
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.74 E-value=0.028 Score=52.62 Aligned_cols=81 Identities=17% Similarity=0.251 Sum_probs=57.7
Q ss_pred hcCCCCHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhCCCCCC
Q psy8745 17 ALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAGVSPID 96 (317)
Q Consensus 17 ~~~p~~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~~~~~d 96 (317)
..|+ +++.+.. .+.+.|+.......+.|+||+.+|.++.. +| .+++|= -|-+++|-+|||.. |+-
T Consensus 164 ~~f~-did~~~~---~v~elL~~hqpqPsLlHGDLW~gN~a~~~-~G-Pv~fDP-A~y~GDrE~Dlam~--elF------ 228 (286)
T COG3001 164 LTFG-DIDAIVE---KIQELLADHQPQPSLLHGDLWSGNCAFGK-DG-PVIFDP-ACYWGDRECDLAML--ELF------ 228 (286)
T ss_pred CCcc-CHHHHHH---HHHHHHhcCCCCcceeecccccccccccC-CC-Ceeecc-ccccCCcccceehh--hhh------
Confidence 4677 7766554 55666777777789999999999999865 34 777775 35568999999974 221
Q ss_pred CCCCCCHHHHHHHHHHHHHHhc
Q psy8745 97 HSRYPGPEFQLSWLRTYLEEYT 118 (317)
Q Consensus 97 ~~~yp~~e~~~~fi~~YL~~y~ 118 (317)
..|| .+|.+.|.+.+.
T Consensus 229 -ggfp-----~efy~gY~sv~P 244 (286)
T COG3001 229 -GGFP-----PEFYDGYQSVSP 244 (286)
T ss_pred -cCCc-----HHHHHhhhccCC
Confidence 1233 457889988764
No 72
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=95.72 E-value=0.017 Score=50.97 Aligned_cols=30 Identities=30% Similarity=0.378 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|+||++++ ++.+.||||..|+
T Consensus 144 ~gi~H~Dl~p~Nill~~-~~~~~liDfg~~~ 173 (198)
T cd05144 144 HGIIHGDLSEFNILVDD-DEKIYIIDWPQMV 173 (198)
T ss_pred CCCCcCCCCcccEEEcC-CCcEEEEECCccc
Confidence 57999999999999986 6789999998774
No 73
>smart00090 RIO RIO-like kinase.
Probab=95.71 E-value=0.02 Score=52.80 Aligned_cols=28 Identities=32% Similarity=0.364 Sum_probs=25.2
Q ss_pred eeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 46 FCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 46 ~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
+||+|++|+||+++ +++++||||..|..
T Consensus 170 iiH~Dikp~NIli~--~~~i~LiDFg~a~~ 197 (237)
T smart00090 170 LVHGDLSEYNILVH--DGKVVIIDVSQSVE 197 (237)
T ss_pred EEeCCCChhhEEEE--CCCEEEEEChhhhc
Confidence 89999999999997 47899999988873
No 74
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=95.58 E-value=0.02 Score=51.33 Aligned_cols=29 Identities=38% Similarity=0.428 Sum_probs=22.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..+.|+||.+.|||+++ +++++|||+-|-
T Consensus 126 ~givHGDLs~~NIlv~~--~~~~iIDf~qav 154 (188)
T PF01163_consen 126 AGIVHGDLSEYNILVDD--GKVYIIDFGQAV 154 (188)
T ss_dssp TTEEESS-STTSEEEET--TCEEE--GTTEE
T ss_pred cCceecCCChhhEEeec--ceEEEEecCcce
Confidence 58999999999999985 589999997554
No 75
>KOG0668|consensus
Probab=95.29 E-value=0.011 Score=55.18 Aligned_cols=41 Identities=20% Similarity=0.263 Sum_probs=35.3
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhH
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDi 82 (317)
...++.|+|++|+|+|+|....++.||||-.|-+..|+-|.
T Consensus 149 HS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eY 189 (338)
T KOG0668|consen 149 HSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEY 189 (338)
T ss_pred HhcCcccccCCcceeeechhhceeeeeecchHhhcCCCcee
Confidence 45789999999999999877788999999888877777654
No 76
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=95.24 E-value=0.04 Score=48.23 Aligned_cols=79 Identities=16% Similarity=0.154 Sum_probs=57.2
Q ss_pred cchhhhhcCC-CCceEEEecC-------ceEEEeecCccCCCCCC---CC----cccHHHHHHHHHhhcccCCCC-----
Q psy8745 187 SPQILHRAGL-APRLYAEFDN-------GLVYQYVRGVTITPDSI---RE----PHIHPLVARNMARLHKVHSNM----- 246 (317)
Q Consensus 187 ~~~~L~~~~~-gp~l~g~F~n-------G~~e~fi~g~tL~~~~l---~~----~~i~~~IA~~la~~H~~~~~~----- 246 (317)
.++.|+..|+ .|++++...+ ..+.+|++|.++....+ .+ ..+...||+.|+++|....+.
T Consensus 48 ~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ 127 (223)
T cd05154 48 VLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGD 127 (223)
T ss_pred HHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcc
Confidence 3456667677 8888888876 58999999999988664 22 256789999999999986531
Q ss_pred -C--CCcchHHHHHHHhhcccc
Q psy8745 247 -K--TPKLWSTGKHMLSLIPRT 265 (317)
Q Consensus 247 -~--~p~lw~~i~kwl~~~~~~ 265 (317)
. ...+...+.+|...+...
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~ 149 (223)
T cd05154 128 LGRPGGYLERQVARWRRQYDAS 149 (223)
T ss_pred cCCCCchHHHHHHHHHHHHHhh
Confidence 1 123677788887766543
No 77
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=95.12 E-value=0.015 Score=52.51 Aligned_cols=28 Identities=32% Similarity=0.465 Sum_probs=24.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYA 73 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya 73 (317)
..++|+||.+.|||+. +++++||||.-|
T Consensus 144 ~glVHGDLs~~NIL~~--~~~v~iIDF~qa 171 (197)
T cd05146 144 CNLVHADLSEYNMLWH--DGKVWFIDVSQS 171 (197)
T ss_pred CCeecCCCCHHHEEEE--CCcEEEEECCCc
Confidence 4899999999999997 378999999743
No 78
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=94.87 E-value=0.019 Score=53.30 Aligned_cols=38 Identities=21% Similarity=0.172 Sum_probs=28.3
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC--chhhhH
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN--YQAFDI 82 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n--~~~fDi 82 (317)
...++|+|++|+|||+++ .+ +.||||-.+... ..+.|+
T Consensus 153 ~~gi~H~Dikp~Nili~~-~g-i~liDfg~~~~~~e~~a~d~ 192 (232)
T PRK10359 153 QHGMVSGDPHKGNFIVSK-NG-LRIIDLSGKRCTAQRKAKDR 192 (232)
T ss_pred HcCCccCCCChHHEEEeC-CC-EEEEECCCcccccchhhHHH
Confidence 458999999999999976 45 999998655543 334444
No 79
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=94.80 E-value=0.033 Score=46.73 Aligned_cols=57 Identities=19% Similarity=0.166 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhh
Q psy8745 23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAF 80 (317)
Q Consensus 23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~f 80 (317)
.+.+...+..+.+.+.... ...++|+|++++||+++...+.+.++||+++......-
T Consensus 91 ~~~~~~~~~~l~~~l~~lh-~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 91 EDEILRILLQILEGLEYLH-SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred HHHHHHHHHHHHHHHHHHH-hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence 4444444444444443222 23899999999999997534789999999998665543
No 80
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=94.73 E-value=0.045 Score=50.65 Aligned_cols=30 Identities=23% Similarity=0.335 Sum_probs=25.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..+-|+|++|+|+++.+ ++|.+||+.-..+
T Consensus 154 ~G~~HGD~hpgNFlv~~--~~i~iID~~~k~~ 183 (229)
T PF06176_consen 154 HGFYHGDPHPGNFLVSN--NGIRIIDTQGKRM 183 (229)
T ss_pred cCCccCCCCcCcEEEEC--CcEEEEECccccc
Confidence 58899999999999974 6799999977654
No 81
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=94.66 E-value=0.046 Score=51.54 Aligned_cols=30 Identities=20% Similarity=0.385 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.|||+++ ++.+.|+||..|.
T Consensus 115 ~~ivHrDikp~NIll~~-~~~~kL~Dfg~~~ 144 (325)
T cd05594 115 KNVVYRDLKLENLMLDK-DGHIKITDFGLCK 144 (325)
T ss_pred CCEEecCCCCCeEEECC-CCCEEEecCCCCe
Confidence 57899999999999986 6789999998765
No 82
>COG3231 Aph Aminoglycoside phosphotransferase [Translation, ribosomal structure and biogenesis]
Probab=94.55 E-value=0.14 Score=47.82 Aligned_cols=64 Identities=27% Similarity=0.285 Sum_probs=46.7
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEE-EEeeccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHH
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVT-FIDYEYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYL 114 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~-lIDfEya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL 114 (317)
...|+||+|----|+|.++ .+.. +||+.-+|.+++..||+........ | .+.......|+..|.
T Consensus 183 edLVv~HGDACLPN~i~d~--~rf~GfIDlGrlGVaDRh~DLala~~s~~~-n------l~g~~~~~~fl~~Yg 247 (266)
T COG3231 183 EDLVVTHGDACLPNFILDG--WRFSGFIDLGRLGVADRHQDLALATWSLRF-N------LGGDVWDDPFLDAYG 247 (266)
T ss_pred hhceeecCcccCcceEecC--CceEEeeecCcccchHHHHhHHHHHHHHHh-c------cCcchhhHHHHHHhC
Confidence 4689999999999999975 3555 9999999999999999976543221 1 234444455555555
No 83
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=94.53 E-value=0.025 Score=56.92 Aligned_cols=34 Identities=29% Similarity=0.398 Sum_probs=29.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ 78 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~ 78 (317)
..++|+|++|+||++++ ++++++|||-.++.-++
T Consensus 276 ~g~~H~D~hPgNilv~~-~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLK-DGKIIALDFGIVGRLSE 309 (437)
T ss_pred CCceeCCCCcccEEECC-CCcEEEEeCCCeeECCH
Confidence 46899999999999976 57899999999876554
No 84
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=94.32 E-value=0.051 Score=48.80 Aligned_cols=51 Identities=16% Similarity=0.197 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
...+...+..+...+.....+..++|+|++++||++++ .+.+.|+||..+.
T Consensus 99 ~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~-~~~~~l~d~g~~~ 149 (265)
T cd06605 99 ERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNS-RGQIKLCDFGVSG 149 (265)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECC-CCCEEEeecccch
Confidence 44444444444444433333468999999999999986 6789999998764
No 85
>KOG0583|consensus
Probab=94.20 E-value=0.025 Score=55.79 Aligned_cols=35 Identities=23% Similarity=0.373 Sum_probs=30.5
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY 77 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~ 77 (317)
...++|+||++.|||++++++++.++||.++...+
T Consensus 138 ~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~ 172 (370)
T KOG0583|consen 138 SRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP 172 (370)
T ss_pred hCCEeeCCCCHHHEEecCCCCCEEEeccccccccC
Confidence 45889999999999998744899999999998765
No 86
>COG2187 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.11 E-value=0.46 Score=45.69 Aligned_cols=115 Identities=21% Similarity=0.234 Sum_probs=67.9
Q ss_pred CCCeeeeecCCCCCCeeeeCCCCeEEEEee----ccccCCchhhhHHHHHHHhhCCCCCCCCCCCCHHHHHHHHHHHHHH
Q psy8745 41 KSPVVFCHNDLLLGNIIYDETEDKVTFIDY----EYAGVNYQAFDIANHFDEFAGVSPIDHSRYPGPEFQLSWLRTYLEE 116 (317)
Q Consensus 41 ~~~~v~CHnDl~~~NiL~~~~~~~l~lIDf----Eya~~n~~~fDiAn~~~E~~~~~~~d~~~yp~~e~~~~fi~~YL~~ 116 (317)
...++=||+||+.+||.+- ++++.|.|+ |--.+.+..+|+|-..-. .++.. -.+.-..|++.|+..
T Consensus 206 ~g~IRecHGDLhl~ni~l~--dg~~~LFDCIEFNd~fr~iDv~~D~AFl~MD------Le~~g--r~dla~~~ln~Yl~~ 275 (337)
T COG2187 206 EGFIRECHGDLHLRNICLW--DGEPALFDCIEFNDPFRFIDVLYDLAFLAMD------LEFRG--RKDLARRFLNTYLEE 275 (337)
T ss_pred cCCceecccchhhcceeee--cCcceEEEEeecCCcchHHHHHHHHHHHHhh------HhhcC--ChHHHHHHHHHHHHH
Confidence 4678999999999999875 367888886 345566778888865432 12222 234556788888876
Q ss_pred hcCCCCCHHHHHHHHHhhhhhhhhhHHHHHHHHHHHhhcCCCCCCH-------HHHHHHHHHHHHHhHhhh
Q psy8745 117 YTGSPPSPHQLATLHWQVQQFSPVAHCFWTIWGLVQAEHSDIEFDF-------FQYASSTYQGYVLKRDKY 180 (317)
Q Consensus 117 y~~~~~s~~ev~~l~~~v~~~~l~shl~W~lWaliq~~~s~~~fDy-------~~Ya~~R~~~y~~~k~el 180 (317)
-. +....++- .+|=+.-|.+.+++..--+|. -.=|..+...|+.+....
T Consensus 276 tg--D~~gl~lL-------------pfyla~rA~VRakV~sf~ldd~~~~a~~k~~a~~~A~~y~~LA~~y 331 (337)
T COG2187 276 TG--DWDGLELL-------------PFYLAYRAYVRAKVTSFLLDDPNLTAAEKEEAAATARRYFKLARQY 331 (337)
T ss_pred hC--CccHHHHh-------------HHHHHHHHHHHHheeEEeccCCCchhhhhHHHHHHhhHHHHHHHHH
Confidence 41 22222222 245566677777765433333 223444555565554443
No 87
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=94.09 E-value=0.026 Score=50.37 Aligned_cols=30 Identities=30% Similarity=0.447 Sum_probs=27.0
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
.++|+|++|.||++++ ++.+.|+||..+..
T Consensus 118 ~i~H~dikp~NIl~~~-~~~~~l~Dfg~~~~ 147 (260)
T PF00069_consen 118 GIVHRDIKPENILLDE-NGEVKLIDFGSSVK 147 (260)
T ss_dssp TEEESSBSGGGEEEST-TSEEEESSGTTTEE
T ss_pred cccccccccccccccc-cccccccccccccc
Confidence 7899999999999985 78899999999864
No 88
>KOG0983|consensus
Probab=94.04 E-value=0.06 Score=51.56 Aligned_cols=60 Identities=25% Similarity=0.278 Sum_probs=40.4
Q ss_pred chhhhhcCCCCHHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 12 SSRFQALFPGGVSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 12 ~~~~~~~~p~~~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
-++...++| .-.|-.-.-.+.+.|.-.+....+.|+|++|.|||+|+ .|+|.|-||--+|
T Consensus 181 lkrik~piP--E~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe-~GniKlCDFGIsG 240 (391)
T KOG0983|consen 181 LKRIKGPIP--ERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDE-RGNIKLCDFGISG 240 (391)
T ss_pred HHHhcCCch--HHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEcc-CCCEEeecccccc
Confidence 356667777 11222222233334444445678999999999999987 6899999997776
No 89
>KOG0984|consensus
Probab=93.77 E-value=0.044 Score=50.60 Aligned_cols=44 Identities=23% Similarity=0.322 Sum_probs=34.0
Q ss_pred HHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 31 QYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 31 ~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
-.+-..+.-.....-+.|+|++|+|||+|. .|+|.+-||--+|+
T Consensus 155 ~Svv~al~~L~~kL~vIHRDvKPsNiLIn~-~GqVKiCDFGIsG~ 198 (282)
T KOG0984|consen 155 VSVVHALEFLHSKLSVIHRDVKPSNILINY-DGQVKICDFGISGY 198 (282)
T ss_pred HHHHHHHHHHHHHhhhhhccCCcceEEEcc-CCcEEEccccccee
Confidence 333344444445677899999999999986 79999999988885
No 90
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=93.74 E-value=0.092 Score=46.04 Aligned_cols=53 Identities=19% Similarity=0.221 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745 23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY 77 (317)
Q Consensus 23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~ 77 (317)
...+..-+..+...+.... ...++|+|++|.||++++ ++.+.|+||..+....
T Consensus 97 ~~~~~~i~~~i~~~l~~lh-~~~i~h~dl~p~ni~i~~-~~~~~l~d~~~~~~~~ 149 (253)
T cd05122 97 ESQIAYVCKELLKGLEYLH-SNGIIHRDIKAANILLTS-DGEVKLIDFGLSAQLS 149 (253)
T ss_pred HHHHHHHHHHHHHHHHHhh-cCCEecCCCCHHHEEEcc-CCeEEEeecccccccc
Confidence 4444444444444443322 256899999999999986 6889999998876543
No 91
>KOG0667|consensus
Probab=93.60 E-value=0.073 Score=55.32 Aligned_cols=36 Identities=22% Similarity=0.357 Sum_probs=28.8
Q ss_pred CeeeeecCCCCCCeeeeC-CCCeEEEEeeccccCCch
Q psy8745 43 PVVFCHNDLLLGNIIYDE-TEDKVTFIDYEYAGVNYQ 78 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~-~~~~l~lIDfEya~~n~~ 78 (317)
...+.|+||+|.|||+.+ +..+|.||||--|++-..
T Consensus 307 ~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q 343 (586)
T KOG0667|consen 307 ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQ 343 (586)
T ss_pred hCCeeeccCChhheeeccCCcCceeEEecccccccCC
Confidence 578999999999999853 345799999988775443
No 92
>KOG0658|consensus
Probab=93.56 E-value=0.042 Score=53.81 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=27.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..+||+|++|.|+|+|.+.+.+.+=||--|.
T Consensus 144 ~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 144 HGICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred cCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 7899999999999999877889999997664
No 93
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=93.55 E-value=0.1 Score=47.07 Aligned_cols=32 Identities=38% Similarity=0.504 Sum_probs=27.5
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
...++|+|+++.||++++ ++.+.++||..+..
T Consensus 132 ~~~i~H~dl~~~nil~~~-~~~~~l~dfg~~~~ 163 (269)
T cd08528 132 EKRIVHRDLTPNNIMLGE-DDKVTITDFGLAKQ 163 (269)
T ss_pred CCceeecCCCHHHEEECC-CCcEEEecccceee
Confidence 346899999999999976 67899999998864
No 94
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=93.51 E-value=0.1 Score=49.92 Aligned_cols=29 Identities=28% Similarity=0.346 Sum_probs=25.3
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeecc
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEY 72 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEy 72 (317)
...+.|+|+.+-|||+++ +|++++|||-=
T Consensus 220 ~~GiVHGDlSefNIlV~~-dg~~~vIDwPQ 248 (304)
T COG0478 220 RRGIVHGDLSEFNILVTE-DGDIVVIDWPQ 248 (304)
T ss_pred HcCccccCCchheEEEec-CCCEEEEeCcc
Confidence 468999999999999986 67899999943
No 95
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=93.43 E-value=0.11 Score=46.44 Aligned_cols=31 Identities=23% Similarity=0.233 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ .+.+.++||..+..
T Consensus 121 ~~i~H~di~p~nil~~~-~~~~~l~df~~~~~ 151 (257)
T cd08223 121 KHILHRDLKTQNVFLTR-TNIIKVGDLGIARV 151 (257)
T ss_pred CCeeccCCCchhEEEec-CCcEEEecccceEE
Confidence 46899999999999976 67899999998754
No 96
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=93.36 E-value=0.082 Score=46.72 Aligned_cols=32 Identities=22% Similarity=0.229 Sum_probs=27.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|+.+.||++++ ++.+.++||..+...
T Consensus 122 ~~~~H~dl~~~nil~~~-~~~~~l~d~~~~~~~ 153 (258)
T cd08215 122 RKILHRDIKPQNIFLTS-NGLVKLGDFGISKVL 153 (258)
T ss_pred CCEecccCChHHeEEcC-CCcEEECCccceeec
Confidence 37899999999999986 688999999888653
No 97
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=93.35 E-value=0.089 Score=49.62 Aligned_cols=31 Identities=23% Similarity=0.353 Sum_probs=27.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.|||+++ ++.+.|+||..+..
T Consensus 115 ~givH~Dlkp~NIll~~-~~~~kL~DfG~~~~ 145 (325)
T cd05604 115 INIVYRDLKPENILLDS-QGHVVLTDFGLCKE 145 (325)
T ss_pred CCeeecCCCHHHeEECC-CCCEEEeecCCccc
Confidence 46899999999999976 67899999998753
No 98
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=93.32 E-value=0.094 Score=47.30 Aligned_cols=31 Identities=23% Similarity=0.383 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++++||++++ ++.+.|+||..+..
T Consensus 121 ~~i~H~dl~~~Nill~~-~~~~~l~dfg~~~~ 151 (260)
T cd05069 121 MNYIHRDLRAANILVGD-NLVCKIADFGLARL 151 (260)
T ss_pred CCEeecccCcceEEEcC-CCeEEECCCccceE
Confidence 35899999999999976 67899999998864
No 99
>KOG0599|consensus
Probab=93.32 E-value=0.076 Score=50.85 Aligned_cols=41 Identities=20% Similarity=0.255 Sum_probs=35.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHH
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANH 85 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~ 85 (317)
.-+.|+||+|.|||.++ +.+|.+-||-+|+--.|+--|-+.
T Consensus 142 ~~IVHRDLKpENILldd-n~~i~isDFGFa~~l~~GekLrel 182 (411)
T KOG0599|consen 142 RNIVHRDLKPENILLDD-NMNIKISDFGFACQLEPGEKLREL 182 (411)
T ss_pred hhhhhcccChhheeecc-ccceEEeccceeeccCCchhHHHh
Confidence 35789999999999987 678999999999999988777654
No 100
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=93.24 E-value=0.095 Score=47.20 Aligned_cols=32 Identities=25% Similarity=0.372 Sum_probs=27.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|++|.||++++ ++.+.|+||..+...
T Consensus 122 ~~i~H~dl~p~Nil~~~-~~~~~l~dfg~~~~~ 153 (261)
T cd05068 122 QNYIHRDLAARNVLVGE-NNICKVADFGLARVI 153 (261)
T ss_pred CCeeeccCCcceEEEcC-CCCEEECCcceEEEc
Confidence 46899999999999986 678999999887643
No 101
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=93.23 E-value=0.11 Score=49.17 Aligned_cols=29 Identities=21% Similarity=0.469 Sum_probs=25.7
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
.++|+|++|.||++++ ++.+.|+||..+.
T Consensus 124 ~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~ 152 (331)
T cd06649 124 QIMHRDVKPSNILVNS-RGEIKLCDFGVSG 152 (331)
T ss_pred CEEcCCCChhhEEEcC-CCcEEEccCcccc
Confidence 5899999999999976 6789999998775
No 102
>KOG0603|consensus
Probab=93.23 E-value=0.1 Score=54.23 Aligned_cols=36 Identities=19% Similarity=0.285 Sum_probs=31.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA 79 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~ 79 (317)
..+.|+||+|+|||++++.+.|.++||-++....+-
T Consensus 434 ~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 434 QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred cCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 788999999999999534688999999988877666
No 103
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=93.18 E-value=0.13 Score=45.59 Aligned_cols=32 Identities=25% Similarity=0.239 Sum_probs=27.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|++++||++++ .+.+.++||.++...
T Consensus 122 ~~~~h~dl~~~nil~~~-~~~~~l~dfg~~~~~ 153 (258)
T smart00219 122 KNFIHRDLAARNCLVGE-NLVVKISDFGLSRDL 153 (258)
T ss_pred CCeeecccccceEEEcc-CCeEEEcccCCceec
Confidence 46799999999999986 578999999988654
No 104
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=93.18 E-value=0.1 Score=46.43 Aligned_cols=33 Identities=27% Similarity=0.352 Sum_probs=28.9
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
...++|+|+++.||++++ .+.+.++||..+..-
T Consensus 128 ~~~i~h~dl~p~nili~~-~~~~kl~d~g~~~~~ 160 (265)
T cd08217 128 GNTVLHRDLKPANIFLDA-NNNVKLGDFGLAKIL 160 (265)
T ss_pred cCcceecCCCHHHEEEec-CCCEEEecccccccc
Confidence 678899999999999986 688999999887753
No 105
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=93.16 E-value=0.1 Score=49.17 Aligned_cols=30 Identities=27% Similarity=0.443 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||++.|||++. ++.+.|+||..+.
T Consensus 124 ~~ivHrDlkp~Nili~~-~~~~kl~DfG~~~ 153 (332)
T cd05614 124 LGIVYRDIKLENILLDS-EGHVVLTDFGLSK 153 (332)
T ss_pred CCcEecCCCHHHeEECC-CCCEEEeeCcCCc
Confidence 45899999999999976 6789999998765
No 106
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=93.16 E-value=0.072 Score=50.38 Aligned_cols=31 Identities=23% Similarity=0.463 Sum_probs=27.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.||+++. ++.+.|+||..+..
T Consensus 120 ~giiH~Dlkp~NIll~~-~~~~kL~Dfg~~~~ 150 (350)
T cd05573 120 LGFIHRDIKPDNILIDA-DGHIKLADFGLCKK 150 (350)
T ss_pred CCeeccCCCHHHeEECC-CCCEEeecCCCCcc
Confidence 57899999999999986 67899999988764
No 107
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=93.12 E-value=0.1 Score=47.67 Aligned_cols=30 Identities=20% Similarity=0.396 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||+++. ++.+.++||..+.
T Consensus 122 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~ 151 (286)
T cd06622 122 HNIIHRDVKPTNVLVNG-NGQVKLCDFGVSG 151 (286)
T ss_pred CCEeeCCCCHHHEEECC-CCCEEEeecCCcc
Confidence 46899999999999986 6789999998875
No 108
>KOG0594|consensus
Probab=93.12 E-value=0.055 Score=52.47 Aligned_cols=32 Identities=19% Similarity=0.267 Sum_probs=28.0
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
....+.|+||+|.|||+++ .|.+.++||--|.
T Consensus 137 H~~~IlHRDLKPQNlLi~~-~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 137 HSHGILHRDLKPQNLLISS-SGVLKLADFGLAR 168 (323)
T ss_pred HhCCeecccCCcceEEECC-CCcEeeeccchHH
Confidence 4467899999999999987 7899999997776
No 109
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=93.09 E-value=0.081 Score=48.29 Aligned_cols=31 Identities=26% Similarity=0.402 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.|+||.++..
T Consensus 127 ~~ivH~dikp~Nili~~-~~~~kl~dfg~~~~ 157 (288)
T cd07863 127 NCIVHRDLKPENILVTS-GGQVKLADFGLARI 157 (288)
T ss_pred CCeecCCCCHHHEEECC-CCCEEECccCcccc
Confidence 35899999999999976 67899999987753
No 110
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=93.06 E-value=0.099 Score=49.33 Aligned_cols=31 Identities=19% Similarity=0.305 Sum_probs=26.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.|||++. ++.+.|+||..+..
T Consensus 115 ~~ivHrDlkp~Nili~~-~~~~kl~Dfg~a~~ 145 (330)
T cd05586 115 YDIVYRDLKPENILLDA-TGHIALCDFGLSKA 145 (330)
T ss_pred CCeEeccCCHHHeEECC-CCCEEEecCCcCcC
Confidence 35899999999999976 67899999998764
No 111
>PRK09188 serine/threonine protein kinase; Provisional
Probab=93.03 E-value=0.066 Score=52.83 Aligned_cols=35 Identities=26% Similarity=0.355 Sum_probs=29.2
Q ss_pred eeeeecCC-CCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745 44 VVFCHNDL-LLGNIIYDETEDKVTFIDYEYAGVNYQA 79 (317)
Q Consensus 44 ~v~CHnDl-~~~NiL~~~~~~~l~lIDfEya~~n~~~ 79 (317)
..++|+|+ +|+|||++. ++.++||||..|..-.+.
T Consensus 130 ~gIiHrDL~KP~NILv~~-~~~ikLiDFGlA~~~~~~ 165 (365)
T PRK09188 130 AGITHNDLAKPQNWLMGP-DGEAAVIDFQLASVFRRR 165 (365)
T ss_pred CCCeeCCCCCcceEEEcC-CCCEEEEECccceecccC
Confidence 57899999 899999975 578999999998865443
No 112
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=93.01 E-value=0.11 Score=48.64 Aligned_cols=31 Identities=19% Similarity=0.306 Sum_probs=27.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||+++. .+.+.++||..+..
T Consensus 112 ~~i~HrDlkp~Nili~~-~~~~kl~Dfg~~~~ 142 (312)
T cd05585 112 FNVIYRDLKPENILLDY-QGHIALCDFGLCKL 142 (312)
T ss_pred CCeEeCCCCHHHeEECC-CCcEEEEECccccc
Confidence 45899999999999976 67899999998764
No 113
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=92.98 E-value=0.096 Score=47.89 Aligned_cols=30 Identities=23% Similarity=0.516 Sum_probs=25.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||+++. .+.+.++||..+.
T Consensus 127 ~~i~H~dlkp~Nil~~~-~~~~kl~dfg~~~ 156 (288)
T cd06616 127 LKIIHRDVKPSNILLDR-NGNIKLCDFGISG 156 (288)
T ss_pred CCeeccCCCHHHEEEcc-CCcEEEeecchhH
Confidence 46899999999999976 5789999997654
No 114
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=92.94 E-value=0.12 Score=45.78 Aligned_cols=33 Identities=27% Similarity=0.353 Sum_probs=28.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY 77 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~ 77 (317)
..++|+|+.|.||++++ ++.+.++||..+....
T Consensus 124 ~~i~H~di~p~nili~~-~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 124 KKFVHRDLAARNCLVGE-DLVVKISDFGLSRDVY 156 (262)
T ss_pred CCcccCccCcceEEECC-CCcEEEcccccccccc
Confidence 56899999999999986 5889999998887544
No 115
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=92.93 E-value=0.11 Score=48.71 Aligned_cols=31 Identities=23% Similarity=0.327 Sum_probs=26.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.||+++. ++.+.|+||..+..
T Consensus 115 ~~ivH~Dlkp~NIll~~-~~~~kl~Dfg~~~~ 145 (321)
T cd05603 115 LNIIYRDLKPENILLDS-QGHVVLTDFGLCKE 145 (321)
T ss_pred CCeEeccCCHHHeEECC-CCCEEEccCCCCcc
Confidence 46899999999999986 67899999988763
No 116
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=92.89 E-value=0.13 Score=46.24 Aligned_cols=31 Identities=23% Similarity=0.380 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.|.||++++ ++.+.++||.++..
T Consensus 121 ~~i~H~dlkp~nil~~~-~~~~kl~dfg~~~~ 151 (256)
T cd05082 121 NNFVHRDLAARNVLVSE-DNVAKVSDFGLTKE 151 (256)
T ss_pred CCEeccccchheEEEcC-CCcEEecCCcccee
Confidence 46899999999999976 67899999987753
No 117
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=92.85 E-value=0.13 Score=48.81 Aligned_cols=29 Identities=21% Similarity=0.466 Sum_probs=25.3
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
.++|+||+|.||++++ .+.+.|+||..+.
T Consensus 124 ~ivH~dlkp~Nili~~-~~~~kL~Dfg~~~ 152 (333)
T cd06650 124 KIMHRDVKPSNILVNS-RGEIKLCDFGVSG 152 (333)
T ss_pred CEEecCCChhhEEEcC-CCCEEEeeCCcch
Confidence 5899999999999976 5789999998764
No 118
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=92.84 E-value=0.12 Score=48.68 Aligned_cols=31 Identities=19% Similarity=0.363 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.||+++. ++.+.|+||..|..
T Consensus 114 ~~ivHrDlkp~NIll~~-~~~~kl~DfG~a~~ 144 (323)
T cd05571 114 CDVVYRDLKLENLMLDK-DGHIKITDFGLCKE 144 (323)
T ss_pred CCeEeCCCCHHHEEECC-CCCEEEeeCCCCcc
Confidence 46899999999999976 67899999987753
No 119
>PHA02882 putative serine/threonine kinase; Provisional
Probab=92.83 E-value=0.064 Score=49.82 Aligned_cols=30 Identities=30% Similarity=0.412 Sum_probs=26.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.|||++. .+.+.|+||..|.
T Consensus 145 ~~iiHrDiKp~Nill~~-~~~~~l~DFGla~ 174 (294)
T PHA02882 145 HGISHGDIKPENIMVDG-NNRGYIIDYGIAS 174 (294)
T ss_pred CCeecCCCCHHHEEEcC-CCcEEEEEcCCce
Confidence 46899999999999976 6789999998775
No 120
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=92.80 E-value=0.055 Score=51.87 Aligned_cols=30 Identities=23% Similarity=0.468 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.|||++. ++.+.|+||..|.
T Consensus 120 ~givHrDLkp~NIli~~-~~~vkL~DfG~~~ 149 (360)
T cd05627 120 LGFIHRDIKPDNLLLDA-KGHVKLSDFGLCT 149 (360)
T ss_pred CCeEccCCCHHHEEECC-CCCEEEeeccCCc
Confidence 46899999999999976 6889999998875
No 121
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=92.77 E-value=0.12 Score=49.04 Aligned_cols=31 Identities=23% Similarity=0.329 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.|||+++ ++.+.|+||..+..
T Consensus 137 ~~ivH~dlkp~NIll~~-~~~~kl~Dfg~~~~ 167 (329)
T PTZ00263 137 KDIIYRDLKPENLLLDN-KGHVKVTDFGFAKK 167 (329)
T ss_pred CCeeecCCCHHHEEECC-CCCEEEeeccCceE
Confidence 45899999999999986 67899999988763
No 122
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=92.74 E-value=0.058 Score=50.82 Aligned_cols=30 Identities=20% Similarity=0.458 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.||+++. .+.+.|+||..|.
T Consensus 121 ~~i~H~Dlkp~NIll~~-~~~~kL~Dfg~a~ 150 (330)
T cd05601 121 MGYVHRDIKPENVLIDR-TGHIKLADFGSAA 150 (330)
T ss_pred CCeEcccCchHheEECC-CCCEEeccCCCCe
Confidence 46899999999999986 6889999998775
No 123
>PRK10345 hypothetical protein; Provisional
Probab=92.71 E-value=0.23 Score=45.12 Aligned_cols=45 Identities=16% Similarity=0.045 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeC---CCCeEEEEeecccc
Q psy8745 26 LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDE---TEDKVTFIDYEYAG 74 (317)
Q Consensus 26 L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~---~~~~l~lIDfEya~ 74 (317)
+.+.+..+.+.+.. ..++|+|++|.|||++. .+..++|||+=.+.
T Consensus 110 ~~~~L~~l~~yLh~----~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~ 157 (210)
T PRK10345 110 LRQLLKKLKRYLLD----NRIVTMELKPQNILCQRISESEVIPVVCDNIGES 157 (210)
T ss_pred HHHHHHHHHHHHHH----CCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence 44444444444433 45789999999999963 23479999964444
No 124
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=92.69 E-value=0.11 Score=49.00 Aligned_cols=30 Identities=20% Similarity=0.368 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.|||+++ ++.+.|+||..+.
T Consensus 115 ~giiHrDlkp~Nili~~-~~~~kl~DfG~a~ 144 (325)
T cd05602 115 LNIVYRDLKPENILLDS-QGHIVLTDFGLCK 144 (325)
T ss_pred CCeEecCCCHHHeEECC-CCCEEEccCCCCc
Confidence 46899999999999976 6789999998775
No 125
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=92.68 E-value=0.059 Score=52.34 Aligned_cols=31 Identities=16% Similarity=0.317 Sum_probs=27.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.|||+++ .+.+.|+||..|..
T Consensus 161 ~~IvHrDLKp~NILl~~-~~~~kL~DFG~a~~ 191 (370)
T cd05621 161 MGLIHRDVKPDNMLLDK-HGHLKLADFGTCMK 191 (370)
T ss_pred CCeEecCCCHHHEEECC-CCCEEEEeccccee
Confidence 46899999999999986 68899999998763
No 126
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=92.67 E-value=0.14 Score=46.57 Aligned_cols=31 Identities=19% Similarity=0.453 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||+++. .+.+.++||..+..
T Consensus 123 ~~i~h~dlkp~nil~~~-~~~~kl~dfg~~~~ 153 (283)
T cd06617 123 LSVIHRDVKPSNVLINR-NGQVKLCDFGISGY 153 (283)
T ss_pred CCeecCCCCHHHEEECC-CCCEEEeecccccc
Confidence 36899999999999976 67899999987763
No 127
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=92.64 E-value=0.13 Score=48.42 Aligned_cols=30 Identities=27% Similarity=0.352 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||+++. ++.+.|+||..|.
T Consensus 115 ~~ivHrDikp~Nill~~-~~~~kL~Dfg~~~ 144 (321)
T cd05591 115 HGVIYRDLKLDNILLDA-EGHCKLADFGMCK 144 (321)
T ss_pred CCeeccCCCHHHeEECC-CCCEEEeecccce
Confidence 35899999999999986 6789999998765
No 128
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=92.59 E-value=0.064 Score=48.14 Aligned_cols=32 Identities=28% Similarity=0.393 Sum_probs=27.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|++|+||+++. ++.+.|+||..+...
T Consensus 119 ~~~~H~dl~p~nili~~-~~~~kl~Dfg~~~~~ 150 (254)
T cd05083 119 KKLVHRDLAARNILVSE-DGVAKVSDFGLARVG 150 (254)
T ss_pred CCeeccccCcceEEEcC-CCcEEECCCccceec
Confidence 46899999999999976 578999999987654
No 129
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=92.53 E-value=0.064 Score=51.57 Aligned_cols=31 Identities=23% Similarity=0.419 Sum_probs=27.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.|||++. .+.+.|+||..|..
T Consensus 120 ~givHrDlKp~NILi~~-~~~vkL~DFGla~~ 150 (363)
T cd05628 120 LGFIHRDIKPDNLLLDS-KGHVKLSDFGLCTG 150 (363)
T ss_pred CCeEecCCCHHHeEECC-CCCEEEeeccCccc
Confidence 46899999999999986 67899999998764
No 130
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=92.53 E-value=0.12 Score=48.98 Aligned_cols=30 Identities=17% Similarity=0.398 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.|||++. .+.+.|+||..|.
T Consensus 121 ~~iiHrDlkp~Nill~~-~~~~kl~DfG~a~ 150 (331)
T cd05624 121 LHYVHRDIKPDNVLLDM-NGHIRLADFGSCL 150 (331)
T ss_pred CCeeeccCchHHEEEcC-CCCEEEEecccee
Confidence 46899999999999976 6789999998764
No 131
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=92.51 E-value=0.13 Score=48.45 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.|||+++ ++.+.|+||..+.
T Consensus 119 ~~ivH~dlkp~Nil~~~-~~~~kl~Dfg~~~ 148 (323)
T cd05584 119 QGIIYRDLKPENILLDA-QGHVKLTDFGLCK 148 (323)
T ss_pred CCeecCCCCHHHeEECC-CCCEEEeeCcCCe
Confidence 45899999999999976 6789999998765
No 132
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=92.49 E-value=0.12 Score=46.42 Aligned_cols=31 Identities=23% Similarity=0.355 Sum_probs=26.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++++||++++ ++.+.++||..+..
T Consensus 121 ~~i~H~di~p~Nili~~-~~~~~l~dfg~~~~ 151 (260)
T cd05070 121 MNYIHRDLRSANILVGD-GLVCKIADFGLARL 151 (260)
T ss_pred CCcccCCCccceEEEeC-CceEEeCCceeeee
Confidence 35899999999999986 57899999998864
No 133
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=92.49 E-value=0.14 Score=48.24 Aligned_cols=30 Identities=23% Similarity=0.359 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 115 ~givH~dikp~NIll~~-~~~~kl~Dfg~~~ 144 (323)
T cd05575 115 LNIIYRDLKPENILLDS-QGHVVLTDFGLCK 144 (323)
T ss_pred CCeEeCCCCHHHeEECC-CCcEEEeccCCCc
Confidence 46899999999999976 6789999998765
No 134
>PTZ00036 glycogen synthase kinase; Provisional
Probab=92.46 E-value=0.15 Score=50.99 Aligned_cols=31 Identities=26% Similarity=0.490 Sum_probs=26.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..+||+||+|.|||++.+.+.+.|+||..|.
T Consensus 189 ~~IiHrDLKp~NILl~~~~~~vkL~DFGla~ 219 (440)
T PTZ00036 189 KFICHRDLKPQNLLIDPNTHTLKLCDFGSAK 219 (440)
T ss_pred CCEecCCcCHHHEEEcCCCCceeeeccccch
Confidence 4699999999999998644569999998875
No 135
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=92.44 E-value=0.12 Score=47.74 Aligned_cols=29 Identities=28% Similarity=0.476 Sum_probs=25.5
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
.+||+|+.+.||++++ ++.+.|+||..+.
T Consensus 135 ~i~H~dl~p~nill~~-~~~~kL~dfg~~~ 163 (296)
T cd06618 135 GVIHRDVKPSNILLDA-SGNVKLCDFGISG 163 (296)
T ss_pred CEecCCCcHHHEEEcC-CCCEEECccccch
Confidence 5899999999999976 6789999998764
No 136
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=92.43 E-value=0.14 Score=48.96 Aligned_cols=31 Identities=16% Similarity=0.367 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||++.|||+++ ++.+.|+||..+..
T Consensus 187 ~~ivHrDlkp~NIll~~-~~~~kL~DfG~~~~ 217 (353)
T PLN00034 187 RHIVHRDIKPSNLLINS-AKNVKIADFGVSRI 217 (353)
T ss_pred CCEeecCCCHHHEEEcC-CCCEEEccccccee
Confidence 46899999999999986 67899999987653
No 137
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=92.43 E-value=0.16 Score=45.93 Aligned_cols=31 Identities=26% Similarity=0.373 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ .+.+.++||.++..
T Consensus 123 ~~i~H~dlkp~nil~~~-~~~~kl~df~~~~~ 153 (263)
T cd05052 123 KNFIHRDLAARNCLVGE-NHLVKVADFGLSRL 153 (263)
T ss_pred CCEeecccCcceEEEcC-CCcEEeCCCccccc
Confidence 46899999999999976 67899999998753
No 138
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=92.41 E-value=0.15 Score=48.14 Aligned_cols=30 Identities=23% Similarity=0.376 Sum_probs=26.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 120 ~~ivH~dlkp~Nill~~-~~~~kL~Dfg~~~ 149 (324)
T cd05587 120 KGIIYRDLKLDNVMLDA-EGHIKIADFGMCK 149 (324)
T ss_pred CCeEecCCCHHHeEEcC-CCCEEEeecCcce
Confidence 46899999999999986 6789999998765
No 139
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=92.41 E-value=0.14 Score=49.33 Aligned_cols=30 Identities=23% Similarity=0.502 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.|||++. ++.+.|+||..|.
T Consensus 120 ~~ivHrDlkp~Nill~~-~~~ikL~DFG~a~ 149 (376)
T cd05598 120 MGFIHRDIKPDNILIDR-DGHIKLTDFGLCT 149 (376)
T ss_pred CCeEeCCCCHHHEEECC-CCCEEEEeCCCCc
Confidence 45899999999999986 6789999998874
No 140
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=92.39 E-value=0.15 Score=48.16 Aligned_cols=31 Identities=23% Similarity=0.328 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.||+++. ++.+.|+||..+..
T Consensus 115 ~~ivH~dlkp~NIli~~-~~~~kL~DfG~~~~ 145 (320)
T cd05590 115 KGIIYRDLKLDNVLLDH-EGHCKLADFGMCKE 145 (320)
T ss_pred CCeEeCCCCHHHeEECC-CCcEEEeeCCCCee
Confidence 46899999999999976 67899999987653
No 141
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=92.26 E-value=0.17 Score=47.03 Aligned_cols=33 Identities=18% Similarity=0.288 Sum_probs=28.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY 77 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~ 77 (317)
..++|+|+++.||+++. ++.+.|+||+.+....
T Consensus 122 ~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 122 LGIVYRDLKPENILLHE-SGHIMLSDFDLSKQSD 154 (316)
T ss_pred CCeeccCCChHHeEEcC-CCCEEEeecchhhccc
Confidence 35899999999999986 5789999999887543
No 142
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=92.23 E-value=0.19 Score=50.69 Aligned_cols=31 Identities=19% Similarity=0.268 Sum_probs=26.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.|||+++ .+.+.|+||..|..
T Consensus 188 ~~ivHrDlkp~NIll~~-~~~~kL~DFgla~~ 218 (478)
T PTZ00267 188 RKMMHRDLKSANIFLMP-TGIIKLGDFGFSKQ 218 (478)
T ss_pred CCEEECCcCHHhEEECC-CCcEEEEeCcCcee
Confidence 46899999999999986 67899999998763
No 143
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=92.23 E-value=0.1 Score=48.20 Aligned_cols=30 Identities=23% Similarity=0.400 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.|||+++ ++.+.|+||..+.
T Consensus 122 ~~ivH~dlkp~Nil~~~-~~~~kl~DfG~~~ 151 (288)
T cd07871 122 RKILHRDLKPQNLLINE-KGELKLADFGLAR 151 (288)
T ss_pred CCcccCCCCHHHEEECC-CCCEEECcCccee
Confidence 46899999999999976 5789999998775
No 144
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=92.23 E-value=0.098 Score=48.80 Aligned_cols=34 Identities=18% Similarity=0.294 Sum_probs=28.8
Q ss_pred eEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC
Q psy8745 208 LVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS 244 (317)
Q Consensus 208 ~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~ 244 (317)
.+.+|++|++++. .++.....+|+.||+||....
T Consensus 91 ~l~~~i~G~~~~~---~~~~~~~~lg~~La~lH~~~~ 124 (296)
T cd05153 91 ALVEFLAGEHLTR---PTAAHCRQIGEALARLHLAAQ 124 (296)
T ss_pred EEEEeCCCCCCCC---CCHHHHHHHHHHHHHHHHHhc
Confidence 5789999998876 467889999999999998753
No 145
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=92.20 E-value=0.14 Score=46.83 Aligned_cols=31 Identities=23% Similarity=0.379 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.|+||..+..
T Consensus 129 ~~iiH~dlkp~Nil~~~-~~~~kl~Dfg~~~~ 159 (290)
T cd07862 129 HRVVHRDLKPQNILVTS-SGQIKLADFGLARI 159 (290)
T ss_pred CCeeeCCCCHHHEEEcC-CCCEEEccccceEe
Confidence 45899999999999976 67899999988753
No 146
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=92.20 E-value=0.15 Score=48.90 Aligned_cols=31 Identities=23% Similarity=0.431 Sum_probs=27.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.|||++. ++.+.|+||..+..
T Consensus 150 ~~ivHrDLkp~NILl~~-~~~ikL~DFG~a~~ 180 (340)
T PTZ00426 150 LNIVYRDLKPENLLLDK-DGFIKMTDFGFAKV 180 (340)
T ss_pred CCeEccCCCHHHEEECC-CCCEEEecCCCCee
Confidence 46899999999999976 67899999988764
No 147
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=92.14 E-value=0.14 Score=48.27 Aligned_cols=32 Identities=19% Similarity=0.338 Sum_probs=27.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+||+|.||++++ .+.+.|+||..+...
T Consensus 120 ~~ivH~dlkp~Nil~~~-~~~~kL~Dfg~a~~~ 151 (333)
T cd05600 120 LGYIHRDLKPENFLIDA-SGHIKLTDFGLSKGI 151 (333)
T ss_pred CCccccCCCHHHEEECC-CCCEEEEeCcCCccc
Confidence 35899999999999976 678999999888643
No 148
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=92.13 E-value=0.17 Score=47.90 Aligned_cols=30 Identities=17% Similarity=0.419 Sum_probs=25.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||++.|||++. ++.+.|+||..+.
T Consensus 121 ~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~ 150 (331)
T cd05597 121 LGYVHRDIKPDNVLLDK-NGHIRLADFGSCL 150 (331)
T ss_pred CCeEECCCCHHHEEECC-CCCEEEEECCcee
Confidence 45789999999999976 6789999998764
No 149
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=92.11 E-value=0.16 Score=48.15 Aligned_cols=31 Identities=19% Similarity=0.350 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.|||+++ ++.+.|+||..+..
T Consensus 114 ~~ivHrDikp~NIll~~-~~~~kL~DfG~~~~ 144 (328)
T cd05593 114 GKIVYRDLKLENLMLDK-DGHIKITDFGLCKE 144 (328)
T ss_pred CCeEecccCHHHeEECC-CCcEEEecCcCCcc
Confidence 46899999999999986 67899999988763
No 150
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=92.10 E-value=0.14 Score=48.40 Aligned_cols=30 Identities=17% Similarity=0.360 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.|||+++ ++.+.|+||..+.
T Consensus 114 ~~ivH~Dlkp~NIll~~-~~~~kL~Dfg~~~ 143 (323)
T cd05595 114 RDVVYRDIKLENLMLDK-DGHIKITDFGLCK 143 (323)
T ss_pred CCeEecCCCHHHEEEcC-CCCEEecccHHhc
Confidence 46899999999999986 6789999998765
No 151
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=92.10 E-value=0.14 Score=47.02 Aligned_cols=31 Identities=23% Similarity=0.317 Sum_probs=26.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.|+||.++..
T Consensus 151 ~~ivH~dlkp~Nil~~~-~~~~kL~Dfg~~~~ 181 (293)
T cd05053 151 KKCIHRDLAARNVLVTE-DHVMKIADFGLARD 181 (293)
T ss_pred CCccccccceeeEEEcC-CCeEEeCccccccc
Confidence 46899999999999976 67899999988763
No 152
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=92.09 E-value=0.15 Score=47.94 Aligned_cols=30 Identities=23% Similarity=0.378 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 120 ~~ivHrDlkp~Nill~~-~~~~kL~DfG~~~ 149 (323)
T cd05616 120 KGIIYRDLKLDNVMLDS-EGHIKIADFGMCK 149 (323)
T ss_pred CCEEecCCCHHHeEECC-CCcEEEccCCCce
Confidence 46899999999999986 6789999998775
No 153
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=92.08 E-value=0.17 Score=48.73 Aligned_cols=30 Identities=23% Similarity=0.459 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.|||++. ++.+.++||..+.
T Consensus 120 ~givHrDlkp~NIll~~-~~~~kl~DfGla~ 149 (377)
T cd05629 120 LGFIHRDIKPDNILIDR-GGHIKLSDFGLST 149 (377)
T ss_pred CCeeccCCCHHHEEECC-CCCEEEeeccccc
Confidence 46999999999999976 6789999998875
No 154
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=92.04 E-value=0.17 Score=48.97 Aligned_cols=30 Identities=23% Similarity=0.502 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.|||++. ++.+.|+||..|.
T Consensus 120 ~~ivHrDlKp~NILl~~-~g~~kL~DFGla~ 149 (382)
T cd05625 120 MGFIHRDIKPDNILIDR-DGHIKLTDFGLCT 149 (382)
T ss_pred CCeecCCCCHHHEEECC-CCCEEEeECCCCc
Confidence 35899999999999976 6889999998864
No 155
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=92.04 E-value=0.087 Score=54.75 Aligned_cols=31 Identities=29% Similarity=0.380 Sum_probs=27.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.|||++++.+.+.|+||..|.
T Consensus 274 ~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~ 304 (566)
T PLN03225 274 TGIVHRDVKPQNIIFSEGSGSFKIIDLGAAA 304 (566)
T ss_pred CCEEeCcCCHHHEEEeCCCCcEEEEeCCCcc
Confidence 4699999999999998645789999999885
No 156
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=92.03 E-value=0.15 Score=48.02 Aligned_cols=30 Identities=20% Similarity=0.370 Sum_probs=26.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ ++.+.|+||..+.
T Consensus 115 ~~ivHrDlkp~Nil~~~-~~~~kl~Dfg~~~ 144 (316)
T cd05620 115 KGIIYRDLKLDNVMLDR-DGHIKIADFGMCK 144 (316)
T ss_pred CCeEecCCCHHHeEECC-CCCEEeCccCCCe
Confidence 46899999999999986 6789999998775
No 157
>KOG4250|consensus
Probab=92.02 E-value=0.18 Score=53.32 Aligned_cols=32 Identities=25% Similarity=0.337 Sum_probs=24.5
Q ss_pred CeeeeecCCCCCCeeeeC-C-CCeEE-EEeecccc
Q psy8745 43 PVVFCHNDLLLGNIIYDE-T-EDKVT-FIDYEYAG 74 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~-~-~~~l~-lIDfEya~ 74 (317)
+..+||+||+|+||+.-. . +..|+ |+||-+|.
T Consensus 138 En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Ar 172 (732)
T KOG4250|consen 138 ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAAR 172 (732)
T ss_pred HcCceeccCCCCcEEEeecCCCceEEeeecccccc
Confidence 568999999999998742 2 23454 99998875
No 158
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=92.00 E-value=0.18 Score=47.72 Aligned_cols=30 Identities=20% Similarity=0.406 Sum_probs=25.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.||+++. ++.+.|+||..+.
T Consensus 121 ~~iiHrDlkp~Nili~~-~~~~kL~DfG~a~ 150 (332)
T cd05623 121 LHYVHRDIKPDNILMDM-NGHIRLADFGSCL 150 (332)
T ss_pred CCeEecCCCHHHEEECC-CCCEEEeecchhe
Confidence 45899999999999976 6789999998764
No 159
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=91.98 E-value=0.17 Score=46.90 Aligned_cols=29 Identities=24% Similarity=0.389 Sum_probs=25.6
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
.++|+|++|.||++++ .+.+.|+||.++.
T Consensus 158 ~ivH~dlkp~Nill~~-~~~~kl~DfG~~~ 186 (304)
T cd05096 158 NFVHRDLATRNCLVGE-NLTIKIADFGMSR 186 (304)
T ss_pred CccccCcchhheEEcC-CccEEECCCccce
Confidence 4899999999999986 6789999998775
No 160
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=91.98 E-value=0.16 Score=46.01 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.|+||.++..
T Consensus 121 ~~i~H~dl~p~Nill~~-~~~~~L~dfg~~~~ 151 (262)
T cd05071 121 MNYVHRDLRAANILVGE-NLVCKVADFGLARL 151 (262)
T ss_pred CCccccccCcccEEEcC-CCcEEeccCCceee
Confidence 45799999999999976 67899999998863
No 161
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=91.96 E-value=0.17 Score=45.19 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
......-+..+.+.+........++|+|+.+.||++++ ++.+.|+||..+..
T Consensus 98 ~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~-~~~~~l~df~~~~~ 149 (264)
T cd06623 98 EPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINS-KGEVKIADFGISKV 149 (264)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECC-CCCEEEccCcccee
Confidence 33333433444444433333278899999999999976 68899999987653
No 162
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=91.94 E-value=0.15 Score=47.71 Aligned_cols=30 Identities=27% Similarity=0.359 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.|||++. ++.+.|+||..+.
T Consensus 122 ~~ivH~dlkp~NIll~~-~~~~kL~Dfg~~~ 151 (338)
T cd07859 122 ANVFHRDLKPKNILANA-DCKLKICDFGLAR 151 (338)
T ss_pred CCeecCCCCHHHeEECC-CCcEEEccCcccc
Confidence 35899999999999976 6789999998775
No 163
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=91.94 E-value=0.091 Score=47.10 Aligned_cols=33 Identities=24% Similarity=0.310 Sum_probs=28.3
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
...++|+|++|.||+++. ++.+.++||.++...
T Consensus 120 ~~~i~H~di~p~Nili~~-~~~~~l~d~g~~~~~ 152 (256)
T cd05039 120 EKNFVHRDLAARNVLVSE-DLVAKVSDFGLAKEA 152 (256)
T ss_pred hCCccchhcccceEEEeC-CCCEEEccccccccc
Confidence 346899999999999986 678999999988765
No 164
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=91.90 E-value=0.18 Score=44.59 Aligned_cols=52 Identities=17% Similarity=0.116 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
.+.+..-+..+...+... ....++|+|+++.||++++ .+.+.++||.++..-
T Consensus 98 ~~~~~~~~~~i~~~l~~l-H~~~i~H~dl~p~ni~i~~-~~~~~l~d~~~~~~~ 149 (254)
T cd06627 98 ESLVAVYVYQVLQGLAYL-HEQGVIHRDIKAANILTTK-DGVVKLADFGVATKL 149 (254)
T ss_pred HHHHHHHHHHHHHHHHHH-hhCCcccCCCCHHHEEECC-CCCEEEeccccceec
Confidence 444444444443333221 2346799999999999986 678999999988743
No 165
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=91.90 E-value=0.087 Score=48.78 Aligned_cols=30 Identities=27% Similarity=0.443 Sum_probs=26.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.||+++. ++.+.++||..+.
T Consensus 120 ~~i~H~dlkp~NIli~~-~~~~kl~Dfg~~~ 149 (291)
T cd05612 120 KEIVYRDLKPENILLDK-EGHIKLTDFGFAK 149 (291)
T ss_pred CCeeecCCCHHHeEECC-CCCEEEEecCcch
Confidence 46899999999999976 6789999998765
No 166
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=91.85 E-value=0.21 Score=46.65 Aligned_cols=31 Identities=23% Similarity=0.384 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||++.||++++ ++.+.|+||..+..
T Consensus 128 ~~iiH~dlkp~Nill~~-~~~~kl~DfG~a~~ 158 (316)
T cd05108 128 RRLVHRDLAARNVLVKT-PQHVKITDFGLAKL 158 (316)
T ss_pred cCeeccccchhheEecC-CCcEEEcccccccc
Confidence 35899999999999976 67899999998864
No 167
>KOG0608|consensus
Probab=91.78 E-value=0.19 Score=53.06 Aligned_cols=32 Identities=22% Similarity=0.462 Sum_probs=28.6
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
....|.|+|++|+|||+|- +|.|.|-||-.|.
T Consensus 746 HkmGFIHRDiKPDNILIDr-dGHIKLTDFGLCT 777 (1034)
T KOG0608|consen 746 HKMGFIHRDIKPDNILIDR-DGHIKLTDFGLCT 777 (1034)
T ss_pred HhccceecccCccceEEcc-CCceeeeeccccc
Confidence 4579999999999999986 6899999998876
No 168
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=91.78 E-value=0.1 Score=54.07 Aligned_cols=36 Identities=22% Similarity=0.324 Sum_probs=29.6
Q ss_pred CeeeeecCCCCCCeeeeCCCC----eEEEEeeccccCCchh
Q psy8745 43 PVVFCHNDLLLGNIIYDETED----KVTFIDYEYAGVNYQA 79 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~----~l~lIDfEya~~n~~~ 79 (317)
...|.|.|++||||+++. ++ ++.+|||-.++.-++.
T Consensus 278 ~~GffHaDpHPGNIlv~~-~g~~~~~i~llDFGivg~l~~~ 317 (537)
T PRK04750 278 RDGFFHADMHPGNIFVSY-DPPENPRYIALDFGIVGSLNKE 317 (537)
T ss_pred hCCeeeCCCChHHeEEec-CCCCCCeEEEEecceEEECCHH
Confidence 357999999999999976 34 8999999988865443
No 169
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=91.77 E-value=0.19 Score=47.07 Aligned_cols=31 Identities=26% Similarity=0.377 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||++.||++++ ++.+.|+||..+..
T Consensus 117 ~~i~H~dlkp~Nil~~~-~~~~kL~Dfg~~~~ 147 (318)
T cd05582 117 LGIIYRDLKPENILLDE-EGHIKLTDFGLSKE 147 (318)
T ss_pred CCEecCCCCHHHeEECC-CCcEEEeeccCCcc
Confidence 46899999999999976 67899999987653
No 170
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=91.72 E-value=0.18 Score=45.63 Aligned_cols=33 Identities=33% Similarity=0.415 Sum_probs=28.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY 77 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~ 77 (317)
..++|+|+.+.||+++. ++.+.+.||..+..-.
T Consensus 128 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 128 QRYIHRDLAARNILVES-EDLVKISDFGLAKVLP 160 (284)
T ss_pred CCeecCCCCHHhEEEcC-CCCEEEcccccccccc
Confidence 46899999999999986 5789999998887644
No 171
>PHA03212 serine/threonine kinase US3; Provisional
Probab=91.72 E-value=0.19 Score=49.31 Aligned_cols=30 Identities=23% Similarity=0.266 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.|||++. .+.+.|+||..|.
T Consensus 201 ~~IvHrDiKP~NIll~~-~~~vkL~DFG~a~ 230 (391)
T PHA03212 201 NRIIHRDIKAENIFINH-PGDVCLGDFGAAC 230 (391)
T ss_pred CCcccCCCChHhEEEcC-CCCEEEEeCCccc
Confidence 35899999999999976 6789999998775
No 172
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=91.71 E-value=0.2 Score=47.56 Aligned_cols=31 Identities=26% Similarity=0.387 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||+++. ++.+.|+||..+..
T Consensus 115 ~~ivH~Dikp~Nili~~-~~~~kL~DfG~~~~ 145 (329)
T cd05618 115 RGIIYRDLKLDNVLLDS-EGHIKLTDYGMCKE 145 (329)
T ss_pred CCeeeCCCCHHHEEECC-CCCEEEeeCCcccc
Confidence 36899999999999976 67899999987753
No 173
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=91.71 E-value=0.073 Score=49.41 Aligned_cols=30 Identities=20% Similarity=0.363 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||+++. ++.+.|+||..+.
T Consensus 122 ~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~ 151 (303)
T cd07869 122 RYILHRDLKPQNLLISD-TGELKLADFGLAR 151 (303)
T ss_pred CCeecCCCCHHHEEECC-CCCEEECCCCcce
Confidence 35899999999999976 6789999998875
No 174
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=91.69 E-value=0.18 Score=47.31 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=28.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ 78 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~ 78 (317)
..++|+|+++.||++++ ++.+.|+||..+.....
T Consensus 122 ~gi~H~dlkp~nili~~-~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 122 ANVIHRDLKPSNILVNS-NCDLKICDFGLARGVDP 155 (330)
T ss_pred CCeecCCCCHHHEEEcC-CCCEEEcccCceEeecc
Confidence 35899999999999986 58899999998885433
No 175
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=91.68 E-value=0.19 Score=47.60 Aligned_cols=30 Identities=23% Similarity=0.409 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.|||+++ ++.+.|+||..+.
T Consensus 115 ~~ivHrDlkp~Nili~~-~~~~kl~Dfg~~~ 144 (327)
T cd05617 115 RGIIYRDLKLDNVLLDA-DGHIKLTDYGMCK 144 (327)
T ss_pred CCeeccCCCHHHEEEeC-CCCEEEeccccce
Confidence 46899999999999986 6789999998765
No 176
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=91.66 E-value=0.096 Score=46.81 Aligned_cols=31 Identities=19% Similarity=0.258 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||+++. ++.+.++||.++..
T Consensus 113 ~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~ 143 (252)
T cd05084 113 KHCIHRDLAARNCLVTE-KNVLKISDFGMSRE 143 (252)
T ss_pred CCccccccchheEEEcC-CCcEEECccccCcc
Confidence 35799999999999976 57899999998763
No 177
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=91.64 E-value=0.24 Score=44.48 Aligned_cols=31 Identities=19% Similarity=0.359 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||+++. ++.+.|+||..+..
T Consensus 114 ~~i~H~di~p~nili~~-~~~~kl~df~~~~~ 144 (257)
T cd05060 114 KHFVHRDLAARNVLLVN-RHQAKISDFGMSRA 144 (257)
T ss_pred cCeeccCcccceEEEcC-CCcEEeccccccce
Confidence 35899999999999976 67899999988764
No 178
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=91.63 E-value=0.078 Score=49.37 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ .+.+.|+||..+..
T Consensus 123 ~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~ 153 (309)
T cd07872 123 RKVLHRDLKPQNLLINE-RGELKLADFGLARA 153 (309)
T ss_pred CCeecCCCCHHHEEECC-CCCEEECcccccee
Confidence 46899999999999986 67899999987753
No 179
>KOG0592|consensus
Probab=91.55 E-value=0.22 Score=51.31 Aligned_cols=36 Identities=22% Similarity=0.331 Sum_probs=30.6
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA 79 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~ 79 (317)
...+.|+||+|.|||+++ ++++.+-||-.|..-.+.
T Consensus 192 ~~GIIHRDlKPENILLd~-dmhikITDFGsAK~l~~~ 227 (604)
T KOG0592|consen 192 SNGIIHRDLKPENILLDK-DGHIKITDFGSAKILSPS 227 (604)
T ss_pred hcCceeccCChhheeEcC-CCcEEEeeccccccCChh
Confidence 468999999999999987 799999999888764443
No 180
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=91.52 E-value=0.2 Score=44.74 Aligned_cols=31 Identities=32% Similarity=0.456 Sum_probs=27.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||+++. ++.+.++||.++..
T Consensus 116 ~~i~H~di~p~nil~~~-~~~~kl~dfg~~~~ 146 (257)
T cd05040 116 KRFIHRDLAARNILLAS-DDKVKIGDFGLMRA 146 (257)
T ss_pred CCccccccCcccEEEec-CCEEEecccccccc
Confidence 46899999999999986 58899999988764
No 181
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=91.51 E-value=0.19 Score=45.01 Aligned_cols=31 Identities=26% Similarity=0.349 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.++||..+..
T Consensus 122 ~~i~h~di~p~nili~~-~~~~~l~d~g~~~~ 152 (261)
T cd05034 122 RNYIHRDLAARNILVGE-NLVCKIADFGLARL 152 (261)
T ss_pred CCcccCCcchheEEEcC-CCCEEECcccccee
Confidence 35899999999999976 68899999987753
No 182
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=91.50 E-value=0.24 Score=44.05 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.|.||+++. ++.+.|+||..+..
T Consensus 112 ~~i~h~di~p~nili~~-~~~~~l~d~g~~~~ 142 (251)
T cd05041 112 KNCIHRDLAARNCLVGE-NNVLKISDFGMSRE 142 (251)
T ss_pred CCEehhhcCcceEEEcC-CCcEEEeecccccc
Confidence 46899999999999976 67899999988764
No 183
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=91.49 E-value=0.21 Score=46.60 Aligned_cols=30 Identities=20% Similarity=0.429 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+++.||++++ ++.+.++||..+.
T Consensus 119 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~ 148 (308)
T cd06615 119 HKIMHRDVKPSNILVNS-RGEIKLCDFGVSG 148 (308)
T ss_pred CCEEECCCChHHEEEec-CCcEEEccCCCcc
Confidence 35899999999999986 5789999998775
No 184
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=91.48 E-value=0.2 Score=47.80 Aligned_cols=31 Identities=16% Similarity=0.394 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.|||++. ++.+.|+||..+..
T Consensus 120 ~~ivH~Dlkp~NIl~~~-~~~~kl~Dfg~~~~ 150 (364)
T cd05599 120 LGYIHRDIKPDNLLLDA-KGHIKLSDFGLCTG 150 (364)
T ss_pred CCeEeccCCHHHeEECC-CCCEEEeeccccee
Confidence 35889999999999976 67899999988753
No 185
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=91.47 E-value=0.091 Score=49.49 Aligned_cols=31 Identities=19% Similarity=0.350 Sum_probs=26.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||+++. ++.+.|+||..|..
T Consensus 115 ~~ivH~dlkp~Nill~~-~~~~kL~Dfg~a~~ 145 (316)
T cd05592 115 KGIIYRDLKLDNVLLDK-DGHIKIADFGMCKE 145 (316)
T ss_pred CCEEeCCCCHHHeEECC-CCCEEEccCcCCeE
Confidence 46899999999999976 67899999988763
No 186
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=91.45 E-value=0.074 Score=49.39 Aligned_cols=31 Identities=19% Similarity=0.379 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||++.||+++. ++.+.++||..+..
T Consensus 134 ~~i~H~dL~p~Nili~~-~~~~~l~Dfg~~~~ 164 (297)
T cd06656 134 NQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQ 164 (297)
T ss_pred CCcccCCCCHHHEEECC-CCCEEECcCccceE
Confidence 46899999999999976 67899999998753
No 187
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=91.45 E-value=0.17 Score=46.05 Aligned_cols=31 Identities=19% Similarity=0.156 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ .+.+.|+||..+..
T Consensus 143 ~gi~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~ 173 (283)
T cd05091 143 HHVVHKDLATRNVLVFD-KLNVKISDLGLFRE 173 (283)
T ss_pred cCccccccchhheEecC-CCceEecccccccc
Confidence 35899999999999976 57799999987663
No 188
>PHA03209 serine/threonine kinase US3; Provisional
Probab=91.45 E-value=0.21 Score=47.99 Aligned_cols=31 Identities=26% Similarity=0.269 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.|||++. .+.+.|+||..+..
T Consensus 176 ~~ivHrDlkp~Nill~~-~~~~kl~DfG~a~~ 206 (357)
T PHA03209 176 QRIIHRDVKTENIFIND-VDQVCIGDLGAAQF 206 (357)
T ss_pred CCeecCCCCHHHEEECC-CCCEEEecCccccc
Confidence 35899999999999976 67899999998763
No 189
>KOG3087|consensus
Probab=91.40 E-value=0.33 Score=44.22 Aligned_cols=34 Identities=24% Similarity=0.430 Sum_probs=27.6
Q ss_pred CeeeeecCCCCCCeeeeCCCCeE--EEEeeccccCC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKV--TFIDYEYAGVN 76 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l--~lIDfEya~~n 76 (317)
..-+||+||...|||+.++.+++ .+|||-.+..+
T Consensus 131 ~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s 166 (229)
T KOG3087|consen 131 DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS 166 (229)
T ss_pred hCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence 35789999999999987655555 89999887765
No 190
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=91.40 E-value=0.19 Score=46.28 Aligned_cols=31 Identities=19% Similarity=0.362 Sum_probs=27.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.|.||++++ ++.+.|+||.++..
T Consensus 120 ~~i~H~dl~p~nili~~-~~~~kl~dfg~~~~ 150 (290)
T cd05580 120 LDIVYRDLKPENLLLDS-DGYIKITDFGFAKR 150 (290)
T ss_pred CCEecCCCCHHHEEECC-CCCEEEeeCCCccc
Confidence 56899999999999976 57899999988764
No 191
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=91.40 E-value=0.099 Score=50.11 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=27.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.|+||..+..
T Consensus 145 ~~ivH~Dlkp~NIll~~-~~~~kL~DfG~a~~ 175 (364)
T cd07875 145 AGIIHRDLKPSNIVVKS-DCTLKILDFGLART 175 (364)
T ss_pred CCeecCCCCHHHEEECC-CCcEEEEeCCCccc
Confidence 46899999999999976 67899999998864
No 192
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=91.39 E-value=0.11 Score=50.30 Aligned_cols=31 Identities=19% Similarity=0.368 Sum_probs=26.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.|||+++ ++.+.|+||..|..
T Consensus 161 ~~ivHrDLkp~NIll~~-~~~ikL~DfG~a~~ 191 (371)
T cd05622 161 MGFIHRDVKPDNMLLDK-SGHLKLADFGTCMK 191 (371)
T ss_pred CCEEeCCCCHHHEEECC-CCCEEEEeCCceeE
Confidence 46899999999999986 68899999988753
No 193
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=91.37 E-value=0.11 Score=49.18 Aligned_cols=31 Identities=23% Similarity=0.362 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.|+||..+..
T Consensus 137 ~~ivHrdikp~Nil~~~-~~~~kl~Dfg~~~~ 167 (343)
T cd07878 137 AGIIHRDLKPSNVAVNE-DCELRILDFGLARQ 167 (343)
T ss_pred CCeecccCChhhEEECC-CCCEEEcCCcccee
Confidence 46899999999999986 67899999987763
No 194
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=91.32 E-value=0.24 Score=47.24 Aligned_cols=30 Identities=30% Similarity=0.400 Sum_probs=26.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.|||+++ .+.+.|+||..+.
T Consensus 192 ~~ivHrDikp~Nill~~-~~~vkL~DfG~a~ 221 (337)
T cd05054 192 RKCIHRDLAARNILLSE-NNVVKICDFGLAR 221 (337)
T ss_pred CCeecCCCCcceEEEeC-CCcEEEeccccch
Confidence 46899999999999986 5789999998765
No 195
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=91.32 E-value=0.14 Score=48.26 Aligned_cols=30 Identities=30% Similarity=0.400 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ ++.+.|+||-.+.
T Consensus 193 ~~ivHrDiKp~Nil~~~-~~~~kl~DfG~a~ 222 (338)
T cd05102 193 RKCIHRDLAARNILLSE-NNVVKICDFGLAR 222 (338)
T ss_pred CCEECCCCccceEEEcC-CCcEEEeeccccc
Confidence 46899999999999986 6789999998775
No 196
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=91.31 E-value=0.11 Score=47.83 Aligned_cols=31 Identities=23% Similarity=0.232 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.|||+++ .+.+.++||..+..
T Consensus 121 ~~iiH~dikp~Nill~~-~~~~kl~Dfg~~~~ 151 (285)
T cd05631 121 ERIVYRDLKPENILLDD-RGHIRISDLGLAVQ 151 (285)
T ss_pred CCEEeCCCCHHHEEECC-CCCEEEeeCCCcEE
Confidence 46899999999999976 57899999987754
No 197
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=91.30 E-value=0.19 Score=46.75 Aligned_cols=31 Identities=26% Similarity=0.298 Sum_probs=25.4
Q ss_pred eeeeecCCCCCCeeeeC---CCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDE---TEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~---~~~~l~lIDfEya~ 74 (317)
..++|+|++|.|||+.. ..+.+.|+||..|.
T Consensus 127 ~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 127 NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 35899999999999942 24679999998875
No 198
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=91.29 E-value=0.22 Score=48.30 Aligned_cols=30 Identities=23% Similarity=0.467 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.|||++. .+.+.|+||..+.
T Consensus 120 ~givHrDlKp~Nili~~-~~~~kL~DFGl~~ 149 (381)
T cd05626 120 MGFIHRDIKPDNILIDL-DGHIKLTDFGLCT 149 (381)
T ss_pred CCeeecCCcHHHEEECC-CCCEEEeeCcCCc
Confidence 46899999999999976 6889999998764
No 199
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=91.29 E-value=0.088 Score=50.35 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=27.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.||+++. ++.+.|+||..+..
T Consensus 142 ~~ivHrDlkp~NIl~~~-~~~~kl~Dfg~a~~ 172 (359)
T cd07876 142 AGIIHRDLKPSNIVVKS-DCTLKILDFGLART 172 (359)
T ss_pred CCcccCCCCHHHEEECC-CCCEEEecCCCccc
Confidence 46899999999999976 68899999988764
No 200
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=91.28 E-value=0.2 Score=45.47 Aligned_cols=32 Identities=19% Similarity=0.285 Sum_probs=27.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|+++.||++++ .+.+.++||..+..-
T Consensus 118 ~~i~H~dl~p~ni~~~~-~~~~~l~dfg~~~~~ 149 (286)
T cd07832 118 NGIMHRDLKPANLLISA-DGVLKIADFGLARLF 149 (286)
T ss_pred CCeecCCcCHHHEEEcC-CCcEEEeeeeecccc
Confidence 35899999999999986 678999999887643
No 201
>KOG0588|consensus
Probab=91.28 E-value=0.12 Score=54.44 Aligned_cols=49 Identities=18% Similarity=0.379 Sum_probs=36.2
Q ss_pred HHHHHHHHhc--CCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745 30 WQYIETALSK--TKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA 79 (317)
Q Consensus 30 ~~~L~~~l~~--~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~ 79 (317)
+..+.+.+.. .....-+||+||+|.|+|++. .++|.+=||-+|..-.++
T Consensus 115 a~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~-~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 115 AHFFRQILDGVSYCHAFNICHRDLKPENLLLDV-KNNIKIADFGMASLEVPG 165 (786)
T ss_pred HHHHHHHHHHHHHHhhhcceeccCCchhhhhhc-ccCEeeeccceeecccCC
Confidence 3344444432 245678999999999999987 455999999999876554
No 202
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=91.28 E-value=0.12 Score=47.16 Aligned_cols=31 Identities=26% Similarity=0.460 Sum_probs=26.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.|+||.++..
T Consensus 128 ~~iiH~dlkp~Nil~~~-~~~~kL~dfG~~~~ 158 (279)
T cd05109 128 VRLVHRDLAARNVLVKS-PNHVKITDFGLARL 158 (279)
T ss_pred CCeeccccccceEEEcC-CCcEEECCCCceee
Confidence 45899999999999975 67899999987754
No 203
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=91.24 E-value=0.23 Score=45.14 Aligned_cols=31 Identities=26% Similarity=0.280 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.||++++ ++.+.++||..+..
T Consensus 138 ~~~vH~dlkp~Nil~~~-~~~~~l~dfg~~~~ 168 (277)
T cd05062 138 NKFVHRDLAARNCMVAE-DFTVKIGDFGMTRD 168 (277)
T ss_pred CCcccCCcchheEEEcC-CCCEEECCCCCccc
Confidence 35899999999999986 67899999987653
No 204
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=91.23 E-value=0.19 Score=46.79 Aligned_cols=31 Identities=26% Similarity=0.358 Sum_probs=26.8
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
...++|+|++|.|||+++ ++.+.|+||..+.
T Consensus 142 ~~gi~H~dlkp~Nili~~-~~~~kl~dfg~~~ 172 (303)
T cd05088 142 QKQFIHRDLAARNILVGE-NYVAKIADFGLSR 172 (303)
T ss_pred hCCccccccchheEEecC-CCcEEeCccccCc
Confidence 357899999999999976 6789999998874
No 205
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=91.18 E-value=0.13 Score=45.90 Aligned_cols=31 Identities=19% Similarity=0.258 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ .+.+.++||..+..
T Consensus 112 ~~~~H~dl~p~nili~~-~~~~~l~d~g~~~~ 142 (250)
T cd05085 112 KNCIHRDLAARNCLVGE-NNVLKISDFGMSRQ 142 (250)
T ss_pred CCeeecccChheEEEcC-CCeEEECCCcccee
Confidence 46899999999999976 67899999998753
No 206
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=91.16 E-value=0.24 Score=47.72 Aligned_cols=31 Identities=23% Similarity=0.373 Sum_probs=26.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.|||+++ ++.+.|+||..+..
T Consensus 122 ~~ivH~dlkp~Nili~~-~~~~kL~Dfg~a~~ 152 (372)
T cd07853 122 AGILHRDIKPGNLLVNS-NCVLKICDFGLARV 152 (372)
T ss_pred CCeeCCCCChHHEEECC-CCCEEeccccceee
Confidence 35899999999999986 67899999998764
No 207
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=91.12 E-value=0.26 Score=45.16 Aligned_cols=31 Identities=23% Similarity=0.368 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||++++ ++.+.++||..+..
T Consensus 124 ~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~ 154 (290)
T cd05613 124 LGIIYRDIKLENILLDS-NGHVVLTDFGLSKE 154 (290)
T ss_pred CCeeccCCCHHHeEECC-CCCEEEeeCcccee
Confidence 46899999999999986 67899999987653
No 208
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=91.12 E-value=0.11 Score=49.68 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=27.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|+||+++. ++.+.|+||..+..
T Consensus 138 ~givHrDikp~Nill~~-~~~~kl~Dfg~~~~ 168 (355)
T cd07874 138 AGIIHRDLKPSNIVVKS-DCTLKILDFGLART 168 (355)
T ss_pred CCcccCCCChHHEEECC-CCCEEEeeCccccc
Confidence 46899999999999976 67899999998864
No 209
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=91.10 E-value=0.21 Score=46.06 Aligned_cols=31 Identities=23% Similarity=0.160 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||++++ .+.+.++||.++..
T Consensus 121 ~~iiH~dikp~Nili~~-~~~~kl~Dfg~~~~ 151 (285)
T cd05632 121 ENTVYRDLKPENILLDD-YGHIRISDLGLAVK 151 (285)
T ss_pred CCeeecCCCHHHEEECC-CCCEEEecCCccee
Confidence 45899999999999976 57899999998753
No 210
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=91.07 E-value=0.18 Score=43.66 Aligned_cols=35 Identities=29% Similarity=0.331 Sum_probs=29.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA 79 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~ 79 (317)
..++|+|+.+.||++++ ++.+.++||+.+..-...
T Consensus 106 ~~i~h~~i~~~ni~~~~-~~~~~l~d~~~~~~~~~~ 140 (244)
T smart00220 106 NGIIHRDLKPENILLDE-DGHVKLADFGLARQLDPG 140 (244)
T ss_pred cCeecCCcCHHHeEECC-CCcEEEccccceeeeccc
Confidence 37899999999999986 578999999988865443
No 211
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=91.06 E-value=0.25 Score=44.60 Aligned_cols=31 Identities=26% Similarity=0.377 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..+.|+|+++.||++++ ++.+.++||..+..
T Consensus 119 ~~i~H~dl~p~nili~~-~~~~kl~d~g~~~~ 149 (256)
T cd05113 119 KQFIHRDLAARNCLVDD-QGCVKVSDFGLSRY 149 (256)
T ss_pred CCeeccccCcceEEEcC-CCCEEECCCcccee
Confidence 46899999999999976 57899999987753
No 212
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=91.04 E-value=0.11 Score=46.86 Aligned_cols=31 Identities=26% Similarity=0.367 Sum_probs=26.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ .+.+.++||..+..
T Consensus 131 ~~i~H~dlkp~Nil~~~-~~~~kl~Dfg~~~~ 161 (272)
T cd05075 131 KSFIHRDLAARNCMLNE-NMNVCVADFGLSKK 161 (272)
T ss_pred CCeeccccchhheEEcC-CCCEEECCCCcccc
Confidence 35899999999999976 67899999987653
No 213
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=91.04 E-value=0.29 Score=44.22 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=27.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY 77 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~ 77 (317)
..++|+|+++.||++++ ++.+.++||.++....
T Consensus 117 ~~i~H~dl~p~nili~~-~~~~~l~df~~~~~~~ 149 (283)
T cd05118 117 HGILHRDLKPENLLINT-EGVLKLADFGLARSFG 149 (283)
T ss_pred CCeeecCcCHHHEEECC-CCcEEEeeeeeeEecC
Confidence 45899999999999986 6789999999886443
No 214
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=91.03 E-value=0.23 Score=44.45 Aligned_cols=31 Identities=26% Similarity=0.279 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||++++ ++.+.++||+++..
T Consensus 123 ~~i~h~dl~~~nilv~~-~~~~kl~d~g~~~~ 153 (261)
T cd05148 123 QNSIHRDLAARNILVGE-DLVCKVADFGLARL 153 (261)
T ss_pred CCeeccccCcceEEEcC-CceEEEccccchhh
Confidence 35899999999999986 57899999998864
No 215
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=91.02 E-value=0.15 Score=46.56 Aligned_cols=32 Identities=25% Similarity=0.375 Sum_probs=27.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|++|.||++++ ++.+.++||.++...
T Consensus 126 ~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~~~ 157 (283)
T cd05080 126 QHYIHRDLAARNVLLDN-DRLVKIGDFGLAKAV 157 (283)
T ss_pred CCeeccccChheEEEcC-CCcEEEeeccccccc
Confidence 46899999999999976 578999999987643
No 216
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=91.01 E-value=0.25 Score=45.47 Aligned_cols=32 Identities=22% Similarity=0.217 Sum_probs=27.2
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
...++|+|++|.||++++ ++.+.|+||.++..
T Consensus 141 ~~~i~H~dlkp~Nil~~~-~~~~~l~dfg~a~~ 172 (291)
T cd05094 141 SQHFVHRDLATRNCLVGA-NLLVKIGDFGMSRD 172 (291)
T ss_pred hCCeeecccCcceEEEcc-CCcEEECCCCcccc
Confidence 346899999999999986 67899999998753
No 217
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=91.00 E-value=0.16 Score=52.41 Aligned_cols=33 Identities=24% Similarity=0.429 Sum_probs=28.4
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
.-.|-|.|+|||||++++ ++++.++||-..|.=
T Consensus 283 ~dgffHaDpHpGNi~v~~-~g~i~~lDfGi~g~l 315 (517)
T COG0661 283 RDGFFHADPHPGNILVRS-DGRIVLLDFGIVGRL 315 (517)
T ss_pred hcCccccCCCccceEEec-CCcEEEEcCcceecC
Confidence 468999999999999987 689999999777643
No 218
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=90.99 E-value=0.23 Score=44.56 Aligned_cols=32 Identities=28% Similarity=0.383 Sum_probs=27.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+||.+.||++++ ++.+.++||+.+...
T Consensus 119 ~~i~h~dl~~~nil~~~-~~~~~l~d~~~~~~~ 150 (258)
T cd05578 119 KGIIHRDIKPDNILLDE-QGHVHITDFNIATKV 150 (258)
T ss_pred CCeeccCCCHHHeEEcC-CCCEEEeeccccccc
Confidence 45899999999999986 678999999877654
No 219
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=90.96 E-value=0.23 Score=45.97 Aligned_cols=30 Identities=23% Similarity=0.351 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ ++.+.|+||..+.
T Consensus 138 ~~ivH~dlkp~Nill~~-~~~~kl~dfg~~~ 167 (297)
T cd05089 138 KQFIHRDLAARNVLVGE-NLASKIADFGLSR 167 (297)
T ss_pred CCcccCcCCcceEEECC-CCeEEECCcCCCc
Confidence 46899999999999976 5789999998775
No 220
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=90.94 E-value=0.36 Score=43.72 Aligned_cols=39 Identities=23% Similarity=0.413 Sum_probs=32.8
Q ss_pred ceEEEeecCccCCCCCCCCc-ccHHHHHHHHHhhcccCCC
Q psy8745 207 GLVYQYVRGVTITPDSIREP-HIHPLVARNMARLHKVHSN 245 (317)
Q Consensus 207 G~~e~fi~g~tL~~~~l~~~-~i~~~IA~~la~~H~~~~~ 245 (317)
+.+.+||+|++++...+.++ .+...+|+-|+++|.+.++
T Consensus 70 ~~l~~~i~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~ 109 (235)
T cd05155 70 WSVYRWLEGETATAAALSDPSEFAEDLADFLAALRQIDPS 109 (235)
T ss_pred eEEEEeecCCCCCccccCCHHHHHHHHHHHHHHHhCCCcc
Confidence 46999999999988877765 5778899999999998764
No 221
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=90.90 E-value=0.2 Score=45.86 Aligned_cols=31 Identities=26% Similarity=0.397 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||++++ ++.+.++||.++..
T Consensus 124 ~~~~H~dl~p~nil~~~-~~~~~l~dfg~~~~ 154 (288)
T cd05583 124 LGIIYRDIKLENILLDS-EGHVVLTDFGLSKE 154 (288)
T ss_pred CCeeccCCCHHHeEECC-CCCEEEEECccccc
Confidence 46899999999999976 57899999987653
No 222
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=90.89 E-value=0.29 Score=43.75 Aligned_cols=31 Identities=26% Similarity=0.293 Sum_probs=26.7
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
...++|+|++|.||++++ ++.+.++||..+.
T Consensus 118 ~~~i~H~dl~p~nili~~-~~~~~l~dfg~~~ 148 (255)
T cd08219 118 EKRVLHRDIKSKNIFLTQ-NGKVKLGDFGSAR 148 (255)
T ss_pred hCCcccCCCCcceEEECC-CCcEEEcccCcce
Confidence 347899999999999976 6789999999775
No 223
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=90.89 E-value=0.34 Score=44.52 Aligned_cols=31 Identities=19% Similarity=0.459 Sum_probs=26.2
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
...++|+|+++.||+++. ++.+.|+||..+.
T Consensus 128 ~~~i~H~dlkp~Nili~~-~~~~kl~dfg~~~ 158 (292)
T cd06644 128 SMKIIHRDLKAGNVLLTL-DGDIKLADFGVSA 158 (292)
T ss_pred cCCeeecCCCcceEEEcC-CCCEEEccCccce
Confidence 357899999999999975 6789999997654
No 224
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=90.85 E-value=0.24 Score=44.83 Aligned_cols=31 Identities=23% Similarity=0.356 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.++||.++..
T Consensus 125 ~~i~h~dlkp~nili~~-~~~~~l~dfg~~~~ 155 (267)
T cd05066 125 MGYVHRDLAARNILVNS-NLVCKVSDFGLSRV 155 (267)
T ss_pred CCEeehhhchhcEEECC-CCeEEeCCCCcccc
Confidence 45899999999999976 67899999987753
No 225
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=90.84 E-value=0.19 Score=46.25 Aligned_cols=31 Identities=23% Similarity=0.348 Sum_probs=27.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||++++ ++.+.++||.++..
T Consensus 134 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~ 164 (311)
T cd07866 134 NHILHRDIKAANILIDN-QGILKIADFGLARP 164 (311)
T ss_pred CCeecCCCCHHHEEECC-CCCEEECcCccchh
Confidence 46899999999999986 67899999988864
No 226
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=90.83 E-value=0.28 Score=45.03 Aligned_cols=31 Identities=26% Similarity=0.259 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ .+.+.|+||.++..
T Consensus 139 ~~i~H~dlkp~Nili~~-~~~~kl~dfg~~~~ 169 (288)
T cd05093 139 QHFVHRDLATRNCLVGE-NLLVKIGDFGMSRD 169 (288)
T ss_pred CCeeecccCcceEEEcc-CCcEEeccCCcccc
Confidence 46899999999999976 67899999998763
No 227
>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase. Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.
Probab=90.83 E-value=0.36 Score=49.93 Aligned_cols=44 Identities=25% Similarity=0.426 Sum_probs=33.7
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeeccc---------cCCchhhhHHHHHHHhh
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYA---------GVNYQAFDIANHFDEFA 90 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya---------~~n~~~fDiAn~~~E~~ 90 (317)
.=||+|+|-+|+|+.. ++.+|||||-= ....|.-|+|.++..+.
T Consensus 380 ~RiHGD~HLgqvL~t~--~d~~IiDFEGEP~Rpl~ERR~k~sPLRDVAGMLRSf~ 432 (528)
T TIGR02457 380 IRIHGDFHLGQVLVVQ--DDAVLIDFEGEPARPLAERRAKRSPLRDVAGMLRSFD 432 (528)
T ss_pred EeEecCcchhcEEEeC--CCeEEEcCCCCCCCChHHhccCCChHHHHHHHHHHHH
Confidence 3399999999999974 56779999861 34567778888877654
No 228
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=90.83 E-value=0.32 Score=43.36 Aligned_cols=32 Identities=13% Similarity=0.012 Sum_probs=25.9
Q ss_pred eeeeecCCCCCCeeeeCCCC------eEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETED------KVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~------~l~lIDfEya~~ 75 (317)
..++|+|++|.||+++.... .+.+.||.++..
T Consensus 120 ~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~ 157 (259)
T cd05037 120 KKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT 157 (259)
T ss_pred CCeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence 46899999999999975321 599999998874
No 229
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=90.81 E-value=0.13 Score=46.47 Aligned_cols=30 Identities=33% Similarity=0.333 Sum_probs=25.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ ++.+.++||..+.
T Consensus 119 ~~ivH~dlkp~Nill~~-~~~~kl~dfg~~~ 148 (269)
T cd05042 119 ADFIHSDLALRNCQLTA-DLSVKIGDYGLAL 148 (269)
T ss_pred cCEecccccHhheEecC-CCcEEEecccccc
Confidence 35799999999999986 6789999998764
No 230
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=90.79 E-value=0.29 Score=44.42 Aligned_cols=30 Identities=27% Similarity=0.372 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ ++.+.++||..+.
T Consensus 131 ~~i~H~dikp~nili~~-~~~~kl~dfgl~~ 160 (270)
T cd05047 131 KQFIHRDLAARNILVGE-NYVAKIADFGLSR 160 (270)
T ss_pred CCEeecccccceEEEcC-CCeEEECCCCCcc
Confidence 57899999999999976 6789999998874
No 231
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=90.76 E-value=0.25 Score=44.13 Aligned_cols=30 Identities=23% Similarity=0.288 Sum_probs=25.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+++.||+++. .+.+.++||+.+.
T Consensus 119 ~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~ 148 (256)
T cd05112 119 SNVIHRDLAARNCLVGE-NQVVKVSDFGMTR 148 (256)
T ss_pred CCccccccccceEEEcC-CCeEEECCCccee
Confidence 35899999999999975 5789999998765
No 232
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=90.73 E-value=0.33 Score=43.60 Aligned_cols=31 Identities=19% Similarity=0.341 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.++||..+..
T Consensus 114 ~~i~H~dlkp~nill~~-~~~~kl~Dfg~~~~ 144 (257)
T cd05116 114 TNFVHRDLAARNVLLVT-QHYAKISDFGLSKA 144 (257)
T ss_pred CCEeecccchhhEEEcC-CCeEEECCCccccc
Confidence 35799999999999976 57799999987753
No 233
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=90.72 E-value=0.11 Score=49.13 Aligned_cols=31 Identities=26% Similarity=0.385 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ .+.+.|+||..+..
T Consensus 115 ~~ivH~dlkp~Nili~~-~~~~kL~Dfg~~~~ 145 (329)
T cd05588 115 RGIIYRDLKLDNVLLDA-EGHIKLTDYGMCKE 145 (329)
T ss_pred CCeEecCCCHHHeEECC-CCCEEECcCccccc
Confidence 46899999999999976 67899999987753
No 234
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=90.71 E-value=0.4 Score=42.45 Aligned_cols=32 Identities=22% Similarity=0.300 Sum_probs=27.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|+++.||+++. .+.+.++||..+...
T Consensus 112 ~~~~H~~l~p~ni~~~~-~~~~~l~d~~~~~~~ 143 (250)
T cd05123 112 LGIIYRDLKPENILLDA-DGHIKLTDFGLAKEL 143 (250)
T ss_pred CCceecCCCcceEEEcC-CCcEEEeecCcceec
Confidence 56899999999999976 678999999877643
No 235
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=90.70 E-value=0.17 Score=46.39 Aligned_cols=31 Identities=16% Similarity=0.227 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ .+.+.++||..+..
T Consensus 114 ~~ivH~dikp~Nili~~-~~~~~l~Dfg~~~~ 144 (277)
T cd05607 114 MDIVYRDMKPENVLLDD-QGNCRLSDLGLAVE 144 (277)
T ss_pred CCEEEccCChHhEEEcC-CCCEEEeeceeeee
Confidence 46899999999999976 67899999987653
No 236
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=90.68 E-value=0.25 Score=45.49 Aligned_cols=30 Identities=17% Similarity=0.402 Sum_probs=25.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ ++.+.|+||..+.
T Consensus 134 ~~i~H~dl~p~Nil~~~-~~~~~l~d~g~~~ 163 (285)
T cd06648 134 QGVIHRDIKSDSILLTS-DGRVKLSDFGFCA 163 (285)
T ss_pred CCeecCCCChhhEEEcC-CCcEEEcccccch
Confidence 46899999999999976 6789999998665
No 237
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=90.67 E-value=0.25 Score=46.49 Aligned_cols=31 Identities=26% Similarity=0.329 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||++.||++++ ++.+.|+||..+..
T Consensus 120 ~~ivHrdlkp~Nill~~-~~~~kL~Dfg~~~~ 150 (324)
T cd05589 120 NKIVYRDLKLDNLLLDT-EGFVKIADFGLCKE 150 (324)
T ss_pred CCeEecCCCHHHeEECC-CCcEEeCcccCCcc
Confidence 45899999999999986 68899999987753
No 238
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=90.66 E-value=0.51 Score=43.32 Aligned_cols=30 Identities=23% Similarity=0.390 Sum_probs=26.0
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
.++|+|+++.||+++..++.+.+.||..+.
T Consensus 122 ~i~H~dl~p~nill~~~~~~~kl~dfg~~~ 151 (294)
T PLN00009 122 RVLHRDLKPQNLLIDRRTNALKLADFGLAR 151 (294)
T ss_pred CeeCCCCCcceEEEECCCCEEEEccccccc
Confidence 589999999999998645678999998875
No 239
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=90.62 E-value=0.13 Score=49.78 Aligned_cols=30 Identities=20% Similarity=0.399 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.|||+++ ++.+.|+||..+.
T Consensus 161 ~~ivHrDLkp~NILl~~-~~~~kL~DfG~~~ 190 (370)
T cd05596 161 MGFIHRDVKPDNMLLDK-SGHLKLADFGTCM 190 (370)
T ss_pred CCeeccCCCHHHEEEcC-CCCEEEEecccee
Confidence 45899999999999986 6889999998765
No 240
>KOG0581|consensus
Probab=90.61 E-value=0.25 Score=48.55 Aligned_cols=36 Identities=17% Similarity=0.358 Sum_probs=30.3
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA 79 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~ 79 (317)
..-+.|+|++|.|||++. .|.|.|=||--++.--..
T Consensus 197 ~~~IIHRDIKPsNlLvNs-kGeVKicDFGVS~~lvnS 232 (364)
T KOG0581|consen 197 ERKIIHRDIKPSNLLVNS-KGEVKICDFGVSGILVNS 232 (364)
T ss_pred ccCeeeccCCHHHeeecc-CCCEEeccccccHHhhhh
Confidence 478899999999999987 799999999888853333
No 241
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=90.61 E-value=0.3 Score=44.88 Aligned_cols=51 Identities=16% Similarity=0.178 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
.+.+...+..+.+.|.-. ....++|+|+.+.||+++. ++.+.++||..+..
T Consensus 101 ~~~~~~~~~qi~~al~~l-H~~~i~H~dl~p~nill~~-~~~~~l~dfg~~~~ 151 (298)
T cd07841 101 PADIKSYMLMTLRGLEYL-HSNWILHRDLKPNNLLIAS-DGVLKLADFGLARS 151 (298)
T ss_pred HHHHHHHHHHHHHHHHHH-HhCCeeecCCChhhEEEcC-CCCEEEccceeeee
Confidence 444444443333333221 1235899999999999986 67899999987753
No 242
>PHA03210 serine/threonine kinase US3; Provisional
Probab=90.60 E-value=0.27 Score=50.04 Aligned_cols=30 Identities=27% Similarity=0.368 Sum_probs=26.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.|||++. ++.++|+||..+.
T Consensus 286 ~gIiHrDLKP~NILl~~-~~~vkL~DFGla~ 315 (501)
T PHA03210 286 KKLIHRDIKLENIFLNC-DGKIVLGDFGTAM 315 (501)
T ss_pred CCeecCCCCHHHEEECC-CCCEEEEeCCCce
Confidence 46899999999999976 6789999998775
No 243
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=90.59 E-value=0.24 Score=45.58 Aligned_cols=30 Identities=30% Similarity=0.310 Sum_probs=25.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+++.||++++ ++.+.++||..+.
T Consensus 116 ~~ivH~dikp~Nil~~~-~~~~~l~dfg~~~ 145 (279)
T cd05633 116 RFVVYRDLKPANILLDE-HGHVRISDLGLAC 145 (279)
T ss_pred CCcCCCCCCHHHEEECC-CCCEEEccCCcce
Confidence 34799999999999976 6789999999875
No 244
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=90.59 E-value=0.12 Score=47.50 Aligned_cols=30 Identities=23% Similarity=0.244 Sum_probs=26.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+++.||++++ ++.+.++||..+.
T Consensus 116 ~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~ 145 (280)
T cd05608 116 RRIIYRDLKPENVLLDN-DGNVRISDLGLAV 145 (280)
T ss_pred CCcccCCCCHHHEEECC-CCCEEEeeCccce
Confidence 46899999999999976 6789999998764
No 245
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=90.56 E-value=0.28 Score=44.04 Aligned_cols=30 Identities=30% Similarity=0.408 Sum_probs=25.9
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
.++|+|++|.||++++ ++.+.++||..+..
T Consensus 120 ~i~H~dl~p~ni~i~~-~~~~kl~dfg~~~~ 149 (256)
T cd05059 120 GFIHRDLAARNCLVGE-DNVVKVSDFGLARY 149 (256)
T ss_pred CcccccccHhhEEECC-CCcEEECCccccee
Confidence 4899999999999976 67899999987753
No 246
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=90.56 E-value=0.26 Score=44.71 Aligned_cols=59 Identities=22% Similarity=0.323 Sum_probs=47.7
Q ss_pred CcchhhhhcCC-CCceEEEecCc--eEEEeecCccCCC-CCCCCcccHHHHHHHHHhhcccCC
Q psy8745 186 PSPQILHRAGL-APRLYAEFDNG--LVYQYVRGVTITP-DSIREPHIHPLVARNMARLHKVHS 244 (317)
Q Consensus 186 ~~~~~L~~~~~-gp~l~g~F~nG--~~e~fi~g~tL~~-~~l~~~~i~~~IA~~la~~H~~~~ 244 (317)
..+..+.+.|+ .|-||-+.++. ++=|||+|+.|.. -+-..|.+++.|.+.++++|.-.+
T Consensus 51 ril~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~~~~~~r~vG~~vg~lH~~gi 113 (204)
T COG3642 51 RILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEARPDLLREVGRLVGKLHKAGI 113 (204)
T ss_pred HHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhcchHHHHHHHHHHHHHHhcCe
Confidence 55667778888 78899999999 8999999998872 112258899999999999998653
No 247
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=90.55 E-value=0.16 Score=45.54 Aligned_cols=31 Identities=23% Similarity=0.309 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.|+||..+..
T Consensus 123 ~~i~H~dl~p~nilv~~-~~~~~l~dfg~~~~ 153 (263)
T cd06625 123 NMIVHRDIKGANILRDS-AGNVKLGDFGASKR 153 (263)
T ss_pred CCeecCCCCHHHEEEcC-CCCEEEeeccccee
Confidence 46799999999999976 67899999988753
No 248
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=90.54 E-value=0.26 Score=43.88 Aligned_cols=32 Identities=25% Similarity=0.359 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||+++++++.+.+.||..+..
T Consensus 120 ~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (256)
T cd08220 120 KLILHRDLKTQNILLDKHKMVVKIGDFGISKI 151 (256)
T ss_pred CCeecCCCCHHHEEEcCCCCEEEEccCCCcee
Confidence 47899999999999976455678999988764
No 249
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=90.51 E-value=0.23 Score=46.92 Aligned_cols=30 Identities=23% Similarity=0.413 Sum_probs=26.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ .+.+.|+||.++.
T Consensus 124 ~givH~dlkp~Nili~~-~~~~kl~Dfg~a~ 153 (332)
T cd07857 124 ANVLHRDLKPGNLLVNA-DCELKICDFGLAR 153 (332)
T ss_pred CCcccCCCCHHHeEEcC-CCCEEeCcCCCce
Confidence 45899999999999976 6789999999875
No 250
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=90.50 E-value=0.38 Score=44.02 Aligned_cols=31 Identities=23% Similarity=0.377 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..+.|+|+++.||++++ ++.+.++||..+..
T Consensus 128 ~~iiH~dlkp~nili~~-~~~~kl~Dfg~~~~ 158 (279)
T cd05111 128 HRMVHRNLAARNILLKS-DSIVQIADFGVADL 158 (279)
T ss_pred CCEeccccCcceEEEcC-CCcEEEcCCcccee
Confidence 34899999999999976 67899999988753
No 251
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=90.45 E-value=0.11 Score=47.98 Aligned_cols=31 Identities=23% Similarity=0.370 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.++||..+..
T Consensus 123 ~~i~H~dlkp~Nil~~~-~~~~kl~dfg~~~~ 153 (301)
T cd07873 123 RKVLHRDLKPQNLLINE-RGELKLADFGLARA 153 (301)
T ss_pred CCeeCCCCCHHHEEECC-CCcEEECcCcchhc
Confidence 46899999999999976 57899999987753
No 252
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=90.38 E-value=0.18 Score=47.20 Aligned_cols=31 Identities=23% Similarity=0.325 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||++++ ++.+.|+||..+..
T Consensus 153 ~gi~H~dlkp~Nill~~-~~~~kL~Dfg~~~~ 183 (314)
T cd05099 153 RRCIHRDLAARNVLVTE-DNVMKIADFGLARG 183 (314)
T ss_pred CCeeeccccceeEEEcC-CCcEEEcccccccc
Confidence 46899999999999976 67899999988763
No 253
>PHA03207 serine/threonine kinase US3; Provisional
Probab=90.35 E-value=0.2 Score=48.93 Aligned_cols=30 Identities=27% Similarity=0.314 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||++.|||++. .+.++|+||..+.
T Consensus 204 ~givHrDlkp~Nill~~-~~~~~l~DfG~a~ 233 (392)
T PHA03207 204 RGIIHRDVKTENIFLDE-PENAVLGDFGAAC 233 (392)
T ss_pred CCccccCCCHHHEEEcC-CCCEEEccCcccc
Confidence 46899999999999986 6789999998775
No 254
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=90.35 E-value=0.32 Score=43.96 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||+++. .+.+.++||..+..
T Consensus 126 ~~~~H~dl~p~nili~~-~~~~~l~d~g~~~~ 156 (270)
T cd05056 126 KRFVHRDIAARNVLVSS-PDCVKLGDFGLSRY 156 (270)
T ss_pred CCeeccccChheEEEec-CCCeEEccCceeee
Confidence 46899999999999986 67899999987754
No 255
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=90.34 E-value=0.16 Score=46.50 Aligned_cols=32 Identities=22% Similarity=0.410 Sum_probs=27.2
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
...++|+|++|.||++++ ++.+.|+||..+..
T Consensus 127 ~~gi~H~dlkp~Nil~~~-~~~~~l~dfg~~~~ 158 (284)
T cd05079 127 SRQYVHRDLAARNVLVES-EHQVKIGDFGLTKA 158 (284)
T ss_pred HCCeeecccchheEEEcC-CCCEEECCCccccc
Confidence 346899999999999976 67899999987763
No 256
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=90.29 E-value=0.18 Score=45.64 Aligned_cols=31 Identities=16% Similarity=0.237 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+++.||+++...+.+.|+||..+.
T Consensus 127 ~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 127 NQIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred CCEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 4689999999999997645789999998764
No 257
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=90.28 E-value=0.29 Score=43.91 Aligned_cols=31 Identities=23% Similarity=0.290 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||++++ ++.+.++||+++..
T Consensus 119 ~~i~H~dl~p~ni~i~~-~~~~kl~d~g~~~~ 149 (256)
T cd05114 119 NSFIHRDLAARNCLVSS-TGVVKVSDFGMTRY 149 (256)
T ss_pred CCccccccCcceEEEcC-CCeEEECCCCCccc
Confidence 45899999999999976 67899999998764
No 258
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=90.28 E-value=0.27 Score=43.86 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=27.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|+.+.||++++ ++.+.+.||..+...
T Consensus 120 ~~i~h~dl~p~ni~~~~-~~~~kl~d~~~~~~~ 151 (256)
T cd08221 120 AGILHRDIKTLNIFLTK-AGLIKLGDFGISKIL 151 (256)
T ss_pred CCccccCCChHhEEEeC-CCCEEECcCcceEEc
Confidence 45789999999999986 678999999887643
No 259
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=90.25 E-value=0.34 Score=44.11 Aligned_cols=32 Identities=22% Similarity=0.344 Sum_probs=27.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|+++.||++++ .+.+.|+||.++..-
T Consensus 128 ~~i~H~di~p~nil~~~-~~~~kL~dfg~~~~~ 159 (279)
T cd05057 128 KRLVHRDLAARNVLVKT-PQHVKITDFGLAKLL 159 (279)
T ss_pred CCEEecccCcceEEEcC-CCeEEECCCcccccc
Confidence 57899999999999976 678999999988643
No 260
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=90.25 E-value=0.22 Score=44.84 Aligned_cols=32 Identities=28% Similarity=0.390 Sum_probs=27.2
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
...++|+|+.+.||+++. ++.+.++||..+..
T Consensus 120 ~~~~~H~dl~~~ni~i~~-~~~~~l~df~~~~~ 151 (280)
T cd05581 120 SKGIIHRDLKPENILLDK-DMHIKITDFGTAKV 151 (280)
T ss_pred HCCeeecCCCHHHeEECC-CCCEEecCCccccc
Confidence 346899999999999976 67899999987763
No 261
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=90.14 E-value=0.28 Score=43.56 Aligned_cols=32 Identities=25% Similarity=0.393 Sum_probs=27.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|+.+.||++++ ++.+.++||..+...
T Consensus 112 ~~i~H~di~~~nil~~~-~~~~~l~dfg~~~~~ 143 (265)
T cd05579 112 NGIIHRDLKPDNILIDS-NGHLKLTDFGLSKVG 143 (265)
T ss_pred cCeecCCCCHHHeEEcC-CCCEEEEecccchhc
Confidence 46899999999999986 678999999876643
No 262
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=90.14 E-value=0.16 Score=45.87 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=27.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|++|.||++++ ++.+.++||.++...
T Consensus 125 ~~i~H~di~p~nili~~-~~~~~l~dfg~~~~~ 156 (266)
T cd05033 125 MNYVHRDLAARNILVNS-NLVCKVSDFGLSRRL 156 (266)
T ss_pred CCcccCCCCcceEEEcC-CCCEEECccchhhcc
Confidence 46899999999999986 678999999877643
No 263
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=90.13 E-value=0.18 Score=45.10 Aligned_cols=31 Identities=23% Similarity=0.327 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||++++ .+.+.|+||.++..
T Consensus 120 ~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~~ 150 (262)
T cd06613 120 TGKIHRDIKGANILLTE-DGDVKLADFGVSAQ 150 (262)
T ss_pred CCceecCCChhhEEECC-CCCEEECccccchh
Confidence 46899999999999986 67899999988753
No 264
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=90.11 E-value=0.31 Score=44.32 Aligned_cols=30 Identities=20% Similarity=0.355 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+++.||+++. ++.+.|+||..+.
T Consensus 118 ~~i~H~dl~~~nil~~~-~~~~~l~dfg~~~ 147 (284)
T cd07839 118 HNVLHRDLKPQNLLINK-NGELKLADFGLAR 147 (284)
T ss_pred CCEecCCCCHHHEEEcC-CCcEEECccchhh
Confidence 36899999999999986 6789999998775
No 265
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=90.06 E-value=0.35 Score=43.01 Aligned_cols=31 Identities=26% Similarity=0.241 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||++++ .+.+.++||..+..
T Consensus 120 ~~i~h~dl~~~nili~~-~~~~~l~df~~~~~ 150 (256)
T cd08529 120 KKILHRDIKSLNLFLDA-YDNVKIGDLGVAKL 150 (256)
T ss_pred CCcccCCCCcceEEEeC-CCCEEEccccccee
Confidence 47899999999999986 67899999987663
No 266
>PTZ00284 protein kinase; Provisional
Probab=89.95 E-value=0.3 Score=48.82 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=24.2
Q ss_pred eeeeecCCCCCCeeeeCCCC---------------eEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETED---------------KVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~---------------~l~lIDfEya~ 74 (317)
..++|+||+|.|||++..+. .+.|+||..+.
T Consensus 251 ~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~ 296 (467)
T PTZ00284 251 LHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCC 296 (467)
T ss_pred CCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccc
Confidence 46899999999999975221 48899998654
No 267
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=89.94 E-value=0.15 Score=48.13 Aligned_cols=30 Identities=23% Similarity=0.375 Sum_probs=26.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ ++.+.|+||..+.
T Consensus 120 ~~ivHrDikp~Nill~~-~~~ikL~Dfg~~~ 149 (323)
T cd05615 120 RGIIYRDLKLDNVMLDS-EGHIKIADFGMCK 149 (323)
T ss_pred CCeeccCCCHHHeEECC-CCCEEEecccccc
Confidence 46899999999999986 6789999998765
No 268
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=89.90 E-value=0.38 Score=43.57 Aligned_cols=30 Identities=23% Similarity=0.254 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.|.||+++. .+.+.|+||..+.
T Consensus 141 ~~i~h~dlkp~nili~~-~~~~kl~d~g~~~ 170 (280)
T cd05049 141 QHFVHRDLATRNCLVGY-DLVVKIGDFGMSR 170 (280)
T ss_pred CCeeccccccceEEEcC-CCeEEECCcccce
Confidence 35899999999999976 5889999998775
No 269
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=89.88 E-value=0.34 Score=44.04 Aligned_cols=31 Identities=26% Similarity=0.291 Sum_probs=26.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.|+||..+..
T Consensus 143 ~~i~H~dlkp~Nil~~~-~~~~~L~dfg~~~~ 173 (283)
T cd05048 143 HHFVHRDLAARNCLVGE-GLTVKISDFGLSRD 173 (283)
T ss_pred CCeeccccccceEEEcC-CCcEEECCCcceee
Confidence 35899999999999976 57899999987753
No 270
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=89.87 E-value=0.44 Score=43.93 Aligned_cols=30 Identities=20% Similarity=0.382 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ .+.+.++||..+.
T Consensus 149 ~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~ 178 (296)
T cd05095 149 LNFVHRDLATRNCLVGK-NYTIKIADFGMSR 178 (296)
T ss_pred CCeecccCChheEEEcC-CCCEEeccCcccc
Confidence 35899999999999976 6789999998876
No 271
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=89.86 E-value=0.16 Score=46.30 Aligned_cols=31 Identities=23% Similarity=0.315 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||++++ .+.+.++||..+..
T Consensus 143 ~~i~H~dlkp~nili~~-~~~~kl~dfg~~~~ 173 (286)
T cd06638 143 NKTIHRDVKGNNILLTT-EGGVKLVDFGVSAQ 173 (286)
T ss_pred CCccccCCCHHhEEECC-CCCEEEccCCceee
Confidence 36899999999999976 57799999998753
No 272
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=89.85 E-value=0.33 Score=44.77 Aligned_cols=31 Identities=19% Similarity=0.338 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.++||..+..
T Consensus 148 ~~i~H~dlkp~Nill~~-~~~~kl~dfg~~~~ 178 (295)
T cd05097 148 LNFVHRDLATRNCLVGN-HYTIKIADFGMSRN 178 (295)
T ss_pred cCeeccccChhhEEEcC-CCcEEecccccccc
Confidence 46799999999999976 57899999987753
No 273
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=89.79 E-value=0.17 Score=46.25 Aligned_cols=31 Identities=19% Similarity=0.368 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||+++. ++.+.++||..+..
T Consensus 119 ~~i~H~dlkp~Nill~~-~~~~kl~Dfg~~~~ 149 (287)
T cd07848 119 NDIVHRDIKPENLLISH-NDVLKLCDFGFARN 149 (287)
T ss_pred CCeecCCCCHHHEEEcC-CCcEEEeeccCccc
Confidence 45899999999999976 67899999988764
No 274
>KOG0616|consensus
Probab=89.77 E-value=0.45 Score=45.96 Aligned_cols=45 Identities=16% Similarity=0.247 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 26 LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 26 L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..+|+-..-+.|.+ .-+..+||+|.|||+|. +|-|.++||-+|-.
T Consensus 149 YAAeivlAleylH~----~~iiYRDLKPENiLlD~-~G~iKitDFGFAK~ 193 (355)
T KOG0616|consen 149 YAAEIVLALEYLHS----LDIIYRDLKPENLLLDQ-NGHIKITDFGFAKR 193 (355)
T ss_pred HHHHHHHHHHHHHh----cCeeeccCChHHeeecc-CCcEEEEeccceEE
Confidence 34455554555544 56889999999999987 78999999988864
No 275
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=89.77 E-value=0.35 Score=44.93 Aligned_cols=30 Identities=20% Similarity=0.426 Sum_probs=26.2
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
.++|+|+.+.||++++ .+.+.|+||.++..
T Consensus 128 ~i~H~dl~p~nil~~~-~~~~kL~dfg~~~~ 157 (309)
T cd07845 128 FIIHRDLKVSNLLLTD-KGCLKIADFGLART 157 (309)
T ss_pred CeecCCCCHHHEEECC-CCCEEECccceeee
Confidence 4899999999999976 67899999988764
No 276
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=89.73 E-value=0.39 Score=44.49 Aligned_cols=31 Identities=19% Similarity=0.313 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++++||+++. ++.+.+.||..+..
T Consensus 120 ~~ivH~dlk~~Nili~~-~~~~kl~d~~~~~~ 150 (314)
T cd08216 120 KGFIHRSVKASHILLSG-DGKVVLSGLRYSVS 150 (314)
T ss_pred CCeecCCCCcceEEEec-CCceEEecCcccee
Confidence 35899999999999986 67899999987653
No 277
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=89.73 E-value=0.34 Score=43.69 Aligned_cols=31 Identities=23% Similarity=0.289 Sum_probs=26.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||+++. .+.+.|+||.++..
T Consensus 125 ~~i~H~dl~p~nil~~~-~~~~~l~Dfg~~~~ 155 (265)
T cd06652 125 NMIVHRDIKGANILRDS-VGNVKLGDFGASKR 155 (265)
T ss_pred CCEecCCCCHHHEEecC-CCCEEECcCccccc
Confidence 34899999999999976 67899999987763
No 278
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=89.72 E-value=0.5 Score=43.10 Aligned_cols=32 Identities=31% Similarity=0.648 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||+++.+.+.+.++||..+..
T Consensus 128 ~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~ 159 (267)
T PHA03390 128 HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKI 159 (267)
T ss_pred CCeeeCCCCHHHEEEeCCCCeEEEecCcccee
Confidence 35899999999999987433899999987753
No 279
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=89.69 E-value=0.19 Score=45.87 Aligned_cols=31 Identities=29% Similarity=0.492 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.++||..+..
T Consensus 127 ~~i~H~dlkp~nili~~-~~~~~l~dfg~~~~ 157 (284)
T cd05081 127 KRYVHRDLATRNILVES-ENRVKIGDFGLTKV 157 (284)
T ss_pred CCceeccCCHhhEEECC-CCeEEECCCccccc
Confidence 35899999999999976 67899999987764
No 280
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=89.67 E-value=0.39 Score=44.54 Aligned_cols=32 Identities=25% Similarity=0.308 Sum_probs=25.8
Q ss_pred eeeeecCCCCCCeeeeC---CCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDE---TEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~---~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++.. ..+.+.|+||..|..
T Consensus 127 ~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 127 NWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 35899999999999842 246799999998863
No 281
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=89.63 E-value=0.52 Score=42.90 Aligned_cols=32 Identities=25% Similarity=0.407 Sum_probs=27.4
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
...++|+|++++||++++ ++.+.++||.++..
T Consensus 119 ~~~i~h~dl~p~Ni~i~~-~~~~~l~dfg~~~~ 150 (277)
T cd06641 119 SEKKIHRDIKAANVLLSE-HGEVKLADFGVAGQ 150 (277)
T ss_pred cCCeecCCCCHHhEEECC-CCCEEEeeccccee
Confidence 457899999999999976 67899999998764
No 282
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=89.62 E-value=0.39 Score=43.90 Aligned_cols=30 Identities=23% Similarity=0.467 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.|.||+++. ++.+.++||.++.
T Consensus 135 ~gi~H~dl~p~ni~i~~-~~~~~l~d~~~~~ 164 (286)
T cd06614 135 QNVIHRDIKSDNILLSK-DGSVKLADFGFAA 164 (286)
T ss_pred CCeeeCCCChhhEEEcC-CCCEEECccchhh
Confidence 56899999999999986 6789999998765
No 283
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=89.61 E-value=0.34 Score=41.74 Aligned_cols=32 Identities=25% Similarity=0.284 Sum_probs=27.8
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY 77 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~ 77 (317)
.++|+|+.+.||+++. ++.+.++||+.+....
T Consensus 118 ~i~h~di~~~ni~v~~-~~~~~l~d~g~~~~~~ 149 (225)
T smart00221 118 GIVHRDLKPENILLGM-DGLVKLADFGLARFIH 149 (225)
T ss_pred CeecCCCCHHHEEEcC-CCCEEEeeCceeeEec
Confidence 8899999999999986 5889999998777543
No 284
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=89.60 E-value=0.42 Score=43.19 Aligned_cols=30 Identities=20% Similarity=0.344 Sum_probs=25.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.||+++. .+.+.++||..+.
T Consensus 114 ~~i~H~dlkp~nil~~~-~~~~kl~dfg~~~ 143 (257)
T cd05115 114 KNFVHRDLAARNVLLVN-QHYAKISDFGLSK 143 (257)
T ss_pred cCeeecccchheEEEcC-CCcEEeccCCccc
Confidence 45899999999999976 5779999998765
No 285
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=89.58 E-value=0.21 Score=44.91 Aligned_cols=30 Identities=27% Similarity=0.366 Sum_probs=25.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..+.|+|++|.||++++ .+.+.++||..+.
T Consensus 132 ~~i~H~dlkp~Nil~~~-~~~~kl~dfg~~~ 161 (273)
T cd05035 132 RNFIHRDLAARNCMLRE-DMTVCVADFGLSK 161 (273)
T ss_pred CCeeccccchheEEECC-CCeEEECCcccee
Confidence 46899999999999976 5789999998765
No 286
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=89.57 E-value=0.25 Score=45.85 Aligned_cols=31 Identities=19% Similarity=0.379 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||+|.||+++. ++.+.++||.++..
T Consensus 135 ~gi~H~dLkp~Nill~~-~~~~kl~dfg~~~~ 165 (296)
T cd06654 135 NQVIHRDIKSDNILLGM-DGSVKLTDFGFCAQ 165 (296)
T ss_pred CCcccCCCCHHHEEEcC-CCCEEECccccchh
Confidence 35899999999999976 57899999998764
No 287
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=89.55 E-value=0.26 Score=45.82 Aligned_cols=31 Identities=16% Similarity=0.369 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||++.||+++. ++.+.++||..+..
T Consensus 134 ~~i~H~dL~p~Nili~~-~~~~kl~dfg~~~~ 164 (296)
T cd06655 134 NQVIHRDIKSDNVLLGM-DGSVKLTDFGFCAQ 164 (296)
T ss_pred CCcccCCCCHHHEEECC-CCCEEEccCccchh
Confidence 35789999999999976 67899999987663
No 288
>KOG1163|consensus
Probab=89.53 E-value=0.51 Score=44.64 Aligned_cols=38 Identities=26% Similarity=0.346 Sum_probs=28.8
Q ss_pred CeeeeecCCCCCCeeee--CCCCeEEEEeeccccCCchhhhHH
Q psy8745 43 PVVFCHNDLLLGNIIYD--ETEDKVTFIDYEYAGVNYQAFDIA 83 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~--~~~~~l~lIDfEya~~n~~~fDiA 83 (317)
...|.|+|++|.|+|.. -..+++++|||-.|. ..+|+-
T Consensus 129 ~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK---ky~d~~ 168 (341)
T KOG1163|consen 129 LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK---KYRDIR 168 (341)
T ss_pred hhccccccCCccceeeccccccceEEEEeccchh---hhcccc
Confidence 35899999999999984 224689999996554 556654
No 289
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=89.52 E-value=0.34 Score=43.60 Aligned_cols=30 Identities=23% Similarity=0.303 Sum_probs=25.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||+++. .+.+.++||..+.
T Consensus 121 ~~i~H~dl~p~ni~i~~-~~~~~l~d~~~~~ 150 (260)
T cd05073 121 RNYIHRDLRAANILVSA-SLVCKIADFGLAR 150 (260)
T ss_pred CCccccccCcceEEEcC-CCcEEECCCccee
Confidence 35799999999999976 6789999998775
No 290
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=89.52 E-value=0.17 Score=47.73 Aligned_cols=31 Identities=23% Similarity=0.357 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||++++ ++.+.++||..+..
T Consensus 115 ~~ivHrdikp~Nil~~~-~~~~kl~Dfg~~~~ 145 (316)
T cd05619 115 KGIVYRDLKLDNILLDT-DGHIKIADFGMCKE 145 (316)
T ss_pred CCeEeCCCCHHHEEECC-CCCEEEccCCcceE
Confidence 46899999999999986 67899999987753
No 291
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=89.50 E-value=0.52 Score=41.76 Aligned_cols=33 Identities=27% Similarity=0.223 Sum_probs=27.4
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
...++|+|+++.||++++ ++.+.|+||..+...
T Consensus 121 ~~~i~h~~l~~~ni~~~~-~~~~kl~d~g~~~~~ 153 (256)
T cd08530 121 EQKILHRDLKSANILLVA-NDLVKIGDLGISKVL 153 (256)
T ss_pred hCCcccCCCCcceEEEec-CCcEEEeeccchhhh
Confidence 346799999999999987 678999999877543
No 292
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=89.46 E-value=0.45 Score=43.41 Aligned_cols=31 Identities=29% Similarity=0.366 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.|.||++++ .+.+.++||..+..
T Consensus 143 ~~i~H~dlkp~nili~~-~~~~kl~dfg~~~~ 173 (283)
T cd05090 143 HFFVHKDLAARNILIGE-QLHVKISDLGLSRE 173 (283)
T ss_pred cCeehhccccceEEEcC-CCcEEecccccccc
Confidence 35899999999999986 57799999987754
No 293
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=89.44 E-value=0.37 Score=43.32 Aligned_cols=31 Identities=29% Similarity=0.353 Sum_probs=25.4
Q ss_pred eeeeecCCCCCCeeeeCCCC-----eEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETED-----KVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~-----~l~lIDfEya~~ 75 (317)
..++|+|+++.||+++. .+ .+.++||.++..
T Consensus 125 ~~i~H~dl~p~nil~~~-~~~~~~~~~~l~dfg~~~~ 160 (269)
T cd05044 125 MHFIHRDLAARNCLVSE-KGYDADRVVKIGDFGLARD 160 (269)
T ss_pred CCcccCCCChheEEEec-CCCCCCcceEECCcccccc
Confidence 35899999999999976 33 689999988753
No 294
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=89.43 E-value=0.42 Score=42.78 Aligned_cols=32 Identities=19% Similarity=0.299 Sum_probs=27.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|+.+.||++++ ++.+.|+||..+...
T Consensus 132 ~~i~H~~l~p~ni~~~~-~~~~~l~d~~~~~~~ 163 (275)
T cd06608 132 NKVIHRDIKGQNILLTK-NAEVKLVDFGVSAQL 163 (275)
T ss_pred CCcccCCCCHHHEEEcc-CCeEEECCCccceec
Confidence 46899999999999986 678999999887643
No 295
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=89.43 E-value=0.4 Score=43.11 Aligned_cols=32 Identities=16% Similarity=0.163 Sum_probs=27.2
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
...++|+|+.+.||+++. .+.+.++||..+..
T Consensus 124 ~~~i~H~dl~~~nil~~~-~~~~~l~d~g~~~~ 155 (267)
T cd08228 124 SRRVMHRDIKPANVFITA-TGVVKLGDLGLGRF 155 (267)
T ss_pred hCCeeCCCCCHHHEEEcC-CCCEEECcccccee
Confidence 347899999999999976 57899999987764
No 296
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=89.41 E-value=0.37 Score=43.25 Aligned_cols=33 Identities=21% Similarity=0.288 Sum_probs=26.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|+++.||+++.++..+.++||..+...
T Consensus 122 ~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 122 NQIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred CCeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 468999999999999764456899999887543
No 297
>PHA03211 serine/threonine kinase US3; Provisional
Probab=89.41 E-value=0.39 Score=48.68 Aligned_cols=31 Identities=16% Similarity=0.264 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||++.|||++. .+.+.|+||..+..
T Consensus 279 ~gIvHrDLKP~NILl~~-~~~vkL~DFGla~~ 309 (461)
T PHA03211 279 EGIIHRDIKTENVLVNG-PEDICLGDFGAACF 309 (461)
T ss_pred CCEEECcCCHHHEEECC-CCCEEEcccCCcee
Confidence 35899999999999976 67899999988753
No 298
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=89.41 E-value=0.32 Score=43.51 Aligned_cols=29 Identities=17% Similarity=0.224 Sum_probs=25.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYA 73 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya 73 (317)
..++|+|++|.||++++ ++.+.++||..+
T Consensus 104 ~~i~H~dlkp~Nil~~~-~~~~~l~df~~~ 132 (237)
T cd05576 104 EGIVCRDLNPNNILLDD-RGHIQLTYFSRW 132 (237)
T ss_pred CCeeccCCCHHHEEEcC-CCCEEEecccch
Confidence 46899999999999986 678999998754
No 299
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=89.30 E-value=0.58 Score=42.78 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.+.||+++.+.+.+.+.||..+.
T Consensus 129 ~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~ 159 (295)
T cd07837 129 HGVMHRDLKPQNLLVDKQKGLLKIADLGLGR 159 (295)
T ss_pred CCeeecCCChHHEEEecCCCeEEEeecccce
Confidence 4689999999999998646789999998765
No 300
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=89.30 E-value=0.27 Score=45.69 Aligned_cols=31 Identities=23% Similarity=0.336 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.++||..+..
T Consensus 159 ~gi~H~dlkp~Nill~~-~~~~kL~dfg~a~~ 189 (307)
T cd05098 159 KKCIHRDLAARNVLVTE-DNVMKIADFGLARD 189 (307)
T ss_pred CCcccccccHHheEEcC-CCcEEECCCccccc
Confidence 47899999999999986 57899999987753
No 301
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=89.23 E-value=0.21 Score=46.41 Aligned_cols=31 Identities=16% Similarity=0.341 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||+++. .+.+.++||..+..
T Consensus 120 ~~i~H~dl~p~NIll~~-~~~~~l~dfg~~~~ 150 (305)
T cd05609 120 YGIVHRDLKPDNLLITS-MGHIKLTDFGLSKI 150 (305)
T ss_pred CCccccCCchHHEEECC-CCCEEEeeCCCccc
Confidence 35899999999999976 67899999998764
No 302
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=89.21 E-value=0.2 Score=45.99 Aligned_cols=30 Identities=20% Similarity=0.269 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||+++. .+.+.|+||..+.
T Consensus 122 ~~i~H~dlkp~Nil~~~-~~~~~l~Dfg~~~ 151 (291)
T cd07870 122 QHILHRDLKPQNLLISY-LGELKLADFGLAR 151 (291)
T ss_pred CCcccCCCChHHEEEcC-CCcEEEecccccc
Confidence 35899999999999976 6789999998775
No 303
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=89.21 E-value=0.53 Score=42.56 Aligned_cols=30 Identities=30% Similarity=0.386 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||+++. .+.+.++||..+.
T Consensus 119 ~~i~H~dlkp~nil~~~-~~~~kL~dfg~~~ 148 (269)
T cd05087 119 NNFIHSDLALRNCLLTA-DLTVKIGDYGLSH 148 (269)
T ss_pred CCEeccccCcceEEEcC-CCcEEECCccccc
Confidence 45899999999999976 6789999998774
No 304
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=89.18 E-value=0.45 Score=42.88 Aligned_cols=30 Identities=27% Similarity=0.377 Sum_probs=25.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ .+.+.++||..+.
T Consensus 132 ~~i~H~dikp~nili~~-~~~~kl~dfg~~~ 161 (273)
T cd05074 132 KNFIHRDLAARNCMLNE-NMTVCVADFGLSK 161 (273)
T ss_pred CCEeecccchhhEEEcC-CCCEEECcccccc
Confidence 35899999999999976 6789999998766
No 305
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=89.16 E-value=0.35 Score=44.26 Aligned_cols=30 Identities=27% Similarity=0.356 Sum_probs=26.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ .+.+.++||-++.
T Consensus 149 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~ 178 (288)
T cd05050 149 RKFVHRDLATRNCLVGE-NMVVKIADFGLSR 178 (288)
T ss_pred CCeecccccHhheEecC-CCceEECccccce
Confidence 47999999999999976 6789999997764
No 306
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=89.15 E-value=0.44 Score=44.14 Aligned_cols=30 Identities=23% Similarity=0.361 Sum_probs=26.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+++.||++++ .+.+.++||..+.
T Consensus 156 ~givH~dlkp~Nili~~-~~~~kl~D~g~~~ 185 (304)
T cd05101 156 QKCIHRDLAARNVLVTE-NNVMKIADFGLAR 185 (304)
T ss_pred CCeeecccccceEEEcC-CCcEEECCCccce
Confidence 36899999999999976 5789999998775
No 307
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=89.15 E-value=0.2 Score=46.13 Aligned_cols=31 Identities=23% Similarity=0.194 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||++++ .+.+.++||..+..
T Consensus 121 ~~ivH~dlkp~Nil~~~-~~~~~l~Dfg~~~~ 151 (285)
T cd05605 121 ERIVYRDLKPENILLDD-YGHIRISDLGLAVE 151 (285)
T ss_pred CCcEecCCCHHHEEECC-CCCEEEeeCCCcee
Confidence 35899999999999976 57899999987764
No 308
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=89.14 E-value=0.33 Score=45.64 Aligned_cols=31 Identities=23% Similarity=0.345 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||++++ ++.+.|+||.++..
T Consensus 115 ~~ivH~dlkp~Nill~~-~~~~kl~Dfg~~~~ 145 (318)
T cd05570 115 RGIIYRDLKLDNVLLDS-EGHIKIADFGMCKE 145 (318)
T ss_pred CCeEccCCCHHHeEECC-CCcEEecccCCCee
Confidence 46899999999999986 67899999988753
No 309
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=89.11 E-value=0.37 Score=43.22 Aligned_cols=31 Identities=26% Similarity=0.365 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ .+.+.++||..+..
T Consensus 122 ~~i~H~dl~p~nili~~-~~~~~l~dfg~~~~ 152 (261)
T cd05072 122 KNYIHRDLRAANVLVSE-SLMCKIADFGLARV 152 (261)
T ss_pred CCeeccccchhhEEecC-CCcEEECCCcccee
Confidence 35799999999999986 57899999998864
No 310
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=89.09 E-value=0.37 Score=44.14 Aligned_cols=30 Identities=20% Similarity=0.382 Sum_probs=25.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ .+.+.+.||.++.
T Consensus 149 ~~i~H~dlkp~Nili~~-~~~~~l~dfg~~~ 178 (296)
T cd05051 149 LNFVHRDLATRNCLVGK-NYTIKIADFGMSR 178 (296)
T ss_pred cCccccccchhceeecC-CCceEEcccccee
Confidence 45799999999999986 5789999998765
No 311
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=89.07 E-value=0.41 Score=42.97 Aligned_cols=32 Identities=22% Similarity=0.300 Sum_probs=27.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|+.+.||++++ ++.+.++||..+...
T Consensus 112 ~~~~h~dl~~~nilv~~-~~~~~l~df~~~~~~ 143 (262)
T cd05572 112 RGIIYRDLKPENLLLDS-NGYVKLVDFGFAKKL 143 (262)
T ss_pred CCcccCCCCHHHEEEcC-CCCEEEeeCCccccc
Confidence 56899999999999976 678999999887643
No 312
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=89.04 E-value=0.16 Score=45.84 Aligned_cols=30 Identities=20% Similarity=0.393 Sum_probs=26.0
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
.++|+|+++.||++++ ++.+.++||..+..
T Consensus 131 ~ivh~dl~~~nili~~-~~~~~l~Dfg~~~~ 160 (272)
T cd06637 131 KVIHRDIKGQNVLLTE-NAEVKLVDFGVSAQ 160 (272)
T ss_pred CCccCCCCHHHEEECC-CCCEEEccCCCcee
Confidence 5899999999999986 57899999988753
No 313
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=89.00 E-value=0.46 Score=42.67 Aligned_cols=32 Identities=25% Similarity=0.299 Sum_probs=27.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|++|.||++++ ++.+.++||..+...
T Consensus 121 ~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~~~ 152 (260)
T cd05067 121 KNYIHRDLRAANILVSE-TLCCKIADFGLARLI 152 (260)
T ss_pred CCeecccccHHhEEEcC-CCCEEEccCcceeec
Confidence 45899999999999986 578999999888653
No 314
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=88.99 E-value=0.58 Score=42.43 Aligned_cols=33 Identities=21% Similarity=0.306 Sum_probs=28.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY 77 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~ 77 (317)
..++|+|+.+.||++++ ++.+.|+||..+..-.
T Consensus 119 ~~i~H~dl~~~ni~~~~-~~~~kl~d~g~~~~~~ 151 (288)
T cd07833 119 HNIIHRDIKPENILVSE-SGVLKLCDFGFARALR 151 (288)
T ss_pred CCeecCCCCHHHeEECC-CCCEEEEeeecccccC
Confidence 35899999999999986 6889999998877543
No 315
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=88.94 E-value=0.43 Score=43.16 Aligned_cols=31 Identities=26% Similarity=0.325 Sum_probs=26.4
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
...++|+|+.|.||++++ ++.+.++||.++.
T Consensus 137 ~~~i~H~di~p~nill~~-~~~~kl~dfg~~~ 167 (277)
T cd05032 137 AKKFVHRDLAARNCMVAE-DLTVKIGDFGMTR 167 (277)
T ss_pred hCCccccccChheEEEcC-CCCEEECCcccch
Confidence 346899999999999986 6789999998764
No 316
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=88.90 E-value=0.67 Score=44.99 Aligned_cols=30 Identities=17% Similarity=0.265 Sum_probs=25.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.|||+++ .+.+.|+||..+.
T Consensus 231 ~giiHrDLkp~Nil~~~-~~~~kL~DfGla~ 260 (374)
T cd05106 231 KNCIHRDVAARNVLLTD-GRVAKICDFGLAR 260 (374)
T ss_pred CCEEeccCchheEEEeC-CCeEEEeeceeee
Confidence 35799999999999986 5789999998765
No 317
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=88.89 E-value=0.23 Score=44.56 Aligned_cols=30 Identities=33% Similarity=0.420 Sum_probs=26.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.+.||++++ .+.+.++||..+.
T Consensus 117 ~~i~H~dlk~~nili~~-~~~~kl~dfg~~~ 146 (262)
T cd05058 117 KKFVHRDLAARNCMLDE-SFTVKVADFGLAR 146 (262)
T ss_pred CCccccccCcceEEEcC-CCcEEECCccccc
Confidence 46899999999999976 5779999998775
No 318
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=88.88 E-value=0.46 Score=45.28 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=26.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.|+||..+..
T Consensus 137 ~gi~H~dlkp~Nil~~~-~~~~kL~Dfg~~~~ 167 (353)
T cd07850 137 AGIIHRDLKPSNIVVKS-DCTLKILDFGLART 167 (353)
T ss_pred CCeeeCCCCHHHEEECC-CCCEEEccCcccee
Confidence 36899999999999986 67899999988764
No 319
>KOG0598|consensus
Probab=88.88 E-value=0.34 Score=47.51 Aligned_cols=39 Identities=21% Similarity=0.272 Sum_probs=31.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHH
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIA 83 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiA 83 (317)
..+.|+||+|.|||+|. +|.|.|=||-.|..+--.=|-.
T Consensus 144 ~gIiyRDlKPENILLd~-~GHi~LtDFgL~k~~~~~~~~t 182 (357)
T KOG0598|consen 144 KGIIYRDLKPENILLDE-QGHIKLTDFGLCKEDLKDGDAT 182 (357)
T ss_pred CCeeeccCCHHHeeecC-CCcEEEeccccchhcccCCCcc
Confidence 67899999999999987 7999999998777544443333
No 320
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=88.86 E-value=0.42 Score=43.78 Aligned_cols=30 Identities=30% Similarity=0.310 Sum_probs=26.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.+.||++++ ++.+.++||..+.
T Consensus 116 ~~i~H~di~p~nili~~-~~~~kl~dfg~~~ 145 (278)
T cd05606 116 RFVVYRDLKPANILLDE-HGHVRISDLGLAC 145 (278)
T ss_pred CCEEcCCCCHHHEEECC-CCCEEEccCcCcc
Confidence 45899999999999976 5789999998764
No 321
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=88.82 E-value=0.71 Score=41.66 Aligned_cols=32 Identities=19% Similarity=0.281 Sum_probs=27.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|+++.||++++ ++.+.++||..+...
T Consensus 127 ~~i~H~dl~~~nil~~~-~~~~~l~d~~~~~~~ 158 (272)
T cd06629 127 KGILHRDLKADNLLVDA-DGICKISDFGISKKS 158 (272)
T ss_pred CCeeecCCChhhEEEcC-CCeEEEeeccccccc
Confidence 46899999999999986 688999999888653
No 322
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=88.81 E-value=0.43 Score=43.73 Aligned_cols=31 Identities=23% Similarity=0.347 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||++++ ++.+.++||..+..
T Consensus 147 ~~ivH~dlkp~nili~~-~~~~kl~dfg~~~~ 177 (291)
T cd06639 147 NRIIHRDVKGNNILLTT-EGGVKLVDFGVSAQ 177 (291)
T ss_pred CCeeccCCCHHHEEEcC-CCCEEEeecccchh
Confidence 46899999999999976 67899999987763
No 323
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=88.81 E-value=0.4 Score=42.80 Aligned_cols=32 Identities=25% Similarity=0.394 Sum_probs=26.8
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
...++|+|+.+.||++++ ++.+.|+||.++..
T Consensus 120 ~~~i~h~~l~p~ni~~~~-~~~~~l~df~~~~~ 151 (267)
T cd06610 120 SNGQIHRDIKAGNILLGE-DGSVKIADFGVSAS 151 (267)
T ss_pred hCCeecCCCCHHhEEEcC-CCCEEEcccchHHH
Confidence 346899999999999986 57899999987653
No 324
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=88.79 E-value=0.3 Score=44.53 Aligned_cols=31 Identities=23% Similarity=0.460 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..+.|+|+++.||+++. .+.+.++||..+..
T Consensus 122 ~~i~H~dlkp~nili~~-~~~~kl~dfg~~~~ 152 (282)
T cd06643 122 NKIIHRDLKAGNILFTL-DGDIKLADFGVSAK 152 (282)
T ss_pred CCeeecCCCcccEEEcc-CCCEEEcccccccc
Confidence 46899999999999976 67899999987754
No 325
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=88.78 E-value=0.42 Score=45.55 Aligned_cols=31 Identities=26% Similarity=0.428 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.|.||++++ ++.+.++||..+..
T Consensus 137 ~gi~H~dlkp~Nill~~-~~~~kl~dfg~~~~ 167 (343)
T cd07880 137 AGIIHRDLKPGNLAVNE-DCELKILDFGLARQ 167 (343)
T ss_pred CCeecCCCCHHHEEEcC-CCCEEEeecccccc
Confidence 45899999999999986 67899999987763
No 326
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=88.77 E-value=0.5 Score=43.34 Aligned_cols=29 Identities=21% Similarity=0.369 Sum_probs=25.5
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
.++|+|+.+.||++++ ++.+.++||.++.
T Consensus 126 ~i~H~dl~p~nili~~-~~~~~l~d~g~~~ 154 (293)
T cd07843 126 WILHRDLKTSNLLLNN-RGILKICDFGLAR 154 (293)
T ss_pred CeeeccCCHHHEEECC-CCcEEEeecCcee
Confidence 5899999999999986 6889999998765
No 327
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=88.77 E-value=0.33 Score=43.15 Aligned_cols=32 Identities=19% Similarity=0.167 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||+++++...+.++||.++..
T Consensus 120 ~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~ 151 (257)
T cd08225 120 RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQ 151 (257)
T ss_pred CCcccccCCHHHEEEcCCCCeEEecccccchh
Confidence 46899999999999986444578999988764
No 328
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=88.69 E-value=0.39 Score=45.40 Aligned_cols=30 Identities=20% Similarity=0.361 Sum_probs=26.1
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
.++|+|+++.||++++ .+.+.++||..+..
T Consensus 126 ~ivH~dlkp~Nill~~-~~~~kl~dfg~~~~ 155 (336)
T cd07849 126 NVLHRDLKPSNLLLNT-NCDLKICDFGLARI 155 (336)
T ss_pred CeeccCCCHHHEEECC-CCCEEECcccceee
Confidence 5899999999999976 67899999987754
No 329
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=88.65 E-value=0.35 Score=43.88 Aligned_cols=31 Identities=23% Similarity=0.356 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ ++.+.|+||..+..
T Consensus 120 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~ 150 (285)
T cd07861 120 RRVLHRDLKPQNLLIDN-KGVIKLADFGLARA 150 (285)
T ss_pred CCeeecCCCHHHEEEcC-CCcEEECcccceee
Confidence 46899999999999976 67899999988753
No 330
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=88.62 E-value=0.66 Score=41.95 Aligned_cols=30 Identities=27% Similarity=0.443 Sum_probs=26.1
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
.++|+|+++.||++++ ++.+.|+||..+..
T Consensus 127 ~i~h~~l~~~nili~~-~~~~~l~dfg~~~~ 156 (287)
T cd07838 127 RIVHRDLKPQNILVTS-DGQVKIADFGLARI 156 (287)
T ss_pred CeeeccCChhhEEEcc-CCCEEEeccCccee
Confidence 5899999999999987 58899999987754
No 331
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=88.60 E-value=0.29 Score=45.83 Aligned_cols=31 Identities=29% Similarity=0.500 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||.+.||+++. ++.+.++||..+..
T Consensus 144 ~~i~H~dL~p~Nil~~~-~~~~kl~dfg~~~~ 174 (317)
T cd06635 144 HNMIHRDIKAGNILLTE-PGQVKLADFGSASI 174 (317)
T ss_pred CCcccCCCCcccEEECC-CCCEEEecCCCccc
Confidence 45799999999999976 67899999987754
No 332
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=88.59 E-value=0.4 Score=43.54 Aligned_cols=31 Identities=23% Similarity=0.372 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||++++ ++.+.++||..+..
T Consensus 119 ~~i~h~~l~p~ni~~~~-~~~~~l~dfg~~~~ 149 (286)
T cd07846 119 HNIIHRDIKPENILVSQ-SGVVKLCDFGFART 149 (286)
T ss_pred CCccccCCCHHHEEECC-CCcEEEEeeeeeee
Confidence 46899999999999976 67899999987764
No 333
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=88.54 E-value=0.25 Score=45.14 Aligned_cols=30 Identities=17% Similarity=0.366 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||++.||+++. ++.+.|+||..+.
T Consensus 114 ~~i~H~dlkp~Nill~~-~~~~~l~dfg~~~ 143 (279)
T cd06619 114 LKILHRDVKPSNMLVNT-RGQVKLCDFGVST 143 (279)
T ss_pred CCEeeCCCCHHHEEECC-CCCEEEeeCCcce
Confidence 46899999999999986 6889999998775
No 334
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=88.52 E-value=0.21 Score=44.99 Aligned_cols=31 Identities=23% Similarity=0.294 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.++||++++ .+.+.++||..+..
T Consensus 125 ~~i~H~dl~p~nill~~-~~~~~l~dfg~~~~ 155 (267)
T cd06646 125 KGKMHRDIKGANILLTD-NGDVKLADFGVAAK 155 (267)
T ss_pred CCccccCCCHHHEEECC-CCCEEECcCcccee
Confidence 46899999999999976 57799999998863
No 335
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=88.48 E-value=0.31 Score=44.24 Aligned_cols=29 Identities=31% Similarity=0.374 Sum_probs=25.0
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
.++|+|+++.|||++. ++.+.++||..+.
T Consensus 119 ~i~H~dikp~nil~~~-~~~~~l~Dfg~~~ 147 (268)
T cd05086 119 NFLHSDLALRNCFLTS-DLTVKVGDYGIGP 147 (268)
T ss_pred CeeccCCccceEEEcC-CccEEeccccccc
Confidence 4799999999999976 5789999998764
No 336
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=88.43 E-value=0.55 Score=42.19 Aligned_cols=30 Identities=20% Similarity=0.331 Sum_probs=25.8
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
.++|+|+.|.||++++ .+.+.++||..+..
T Consensus 122 ~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~ 151 (265)
T cd06631 122 CVVHRDIKGNNVMLMP-NGIIKLIDFGCARR 151 (265)
T ss_pred CcccCCcCHHhEEECC-CCeEEeccchhhHh
Confidence 4789999999999976 68899999987663
No 337
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=88.42 E-value=0.23 Score=44.60 Aligned_cols=31 Identities=16% Similarity=0.164 Sum_probs=26.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||+++. ++.+.++||..+..
T Consensus 125 ~~i~H~dl~p~nili~~-~~~~~l~dfg~~~~ 155 (267)
T cd08229 125 RRVMHRDIKPANVFITA-TGVVKLGDLGLGRF 155 (267)
T ss_pred CCeecCCCCHHHEEEcC-CCCEEECcchhhhc
Confidence 46899999999999976 67899999987653
No 338
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=88.42 E-value=0.26 Score=45.49 Aligned_cols=31 Identities=23% Similarity=0.227 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||++++ .+.+.++||..+..
T Consensus 121 ~~iiH~dikp~Nil~~~-~~~~~l~Dfg~~~~ 151 (285)
T cd05630 121 ERIVYRDLKPENILLDD-HGHIRISDLGLAVH 151 (285)
T ss_pred CCEEeCCCCHHHEEECC-CCCEEEeeccceee
Confidence 46889999999999986 57899999987753
No 339
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=88.32 E-value=0.51 Score=42.76 Aligned_cols=32 Identities=19% Similarity=0.372 Sum_probs=27.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..+.|+|+++.||++++ ++.+.++||.++..-
T Consensus 119 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~~ 150 (286)
T cd07847 119 HNCIHRDVKPENILITK-QGQIKLCDFGFARIL 150 (286)
T ss_pred CCceecCCChhhEEEcC-CCcEEECccccceec
Confidence 45789999999999976 578999999887653
No 340
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=88.30 E-value=0.29 Score=43.83 Aligned_cols=31 Identities=16% Similarity=0.177 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.|.||+++. ++.+.++||..+..
T Consensus 125 ~~i~h~dl~p~nil~~~-~~~~~l~d~~~~~~ 155 (267)
T cd08224 125 KRIMHRDIKPANVFITA-TGVVKLGDLGLGRF 155 (267)
T ss_pred CCEecCCcChhhEEECC-CCcEEEeccceeee
Confidence 47899999999999976 67899999987653
No 341
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=88.24 E-value=0.38 Score=44.69 Aligned_cols=30 Identities=17% Similarity=0.405 Sum_probs=25.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.+.||++++ ++.+.++||.++.
T Consensus 135 ~givH~dl~p~Nilv~~-~~~~~l~dfg~~~ 164 (292)
T cd06657 135 QGVIHRDIKSDSILLTH-DGRVKLSDFGFCA 164 (292)
T ss_pred CCeecCCCCHHHEEECC-CCCEEEcccccce
Confidence 35899999999999986 5789999999765
No 342
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=88.20 E-value=0.44 Score=43.21 Aligned_cols=30 Identities=20% Similarity=0.349 Sum_probs=26.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.+.||++++ .+.+.++||.++.
T Consensus 119 ~~i~h~dl~p~ni~~~~-~~~~~l~d~g~~~ 148 (284)
T cd07836 119 NRVLHRDLKPQNLLINK-RGELKLADFGLAR 148 (284)
T ss_pred CCeeeCCCCHHHEEECC-CCcEEEeecchhh
Confidence 46899999999999976 6789999998774
No 343
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=88.18 E-value=0.51 Score=43.72 Aligned_cols=29 Identities=14% Similarity=0.430 Sum_probs=25.4
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
.++|+|+.+.||++++ ++.+.++||..+.
T Consensus 138 ~ivH~dlkp~Nill~~-~~~~kL~dfg~~~ 166 (292)
T cd06658 138 GVIHRDIKSDSILLTS-DGRIKLSDFGFCA 166 (292)
T ss_pred CEeecCCCHHHEEEcC-CCCEEEccCcchh
Confidence 5789999999999976 5789999998765
No 344
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=88.16 E-value=0.57 Score=41.78 Aligned_cols=31 Identities=23% Similarity=0.336 Sum_probs=26.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||+++. ++.+.++||.++..
T Consensus 120 ~~i~h~~l~~~nil~~~-~~~~~l~d~~~~~~ 150 (256)
T cd08218 120 RKILHRDIKSQNIFLTK-DGTIKLGDFGIARV 150 (256)
T ss_pred CCEecCCCCHHHEEEcC-CCCEEEeeccceee
Confidence 46899999999999976 67899999988764
No 345
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=88.15 E-value=0.21 Score=45.68 Aligned_cols=30 Identities=23% Similarity=0.359 Sum_probs=26.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.+.||++++ ++.+.++||..+.
T Consensus 122 ~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~ 151 (291)
T cd07844 122 RRVLHRDLKPQNLLISE-RGELKLADFGLAR 151 (291)
T ss_pred CCeecccCCHHHEEEcC-CCCEEECcccccc
Confidence 35899999999999976 6789999998764
No 346
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=88.12 E-value=0.55 Score=42.77 Aligned_cols=30 Identities=27% Similarity=0.453 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.|+||++++ .+.+.++||..+.
T Consensus 120 ~~ivH~dl~p~Nil~~~-~~~~~l~dfg~~~ 149 (277)
T cd06640 120 EKKIHRDIKAANVLLSE-QGDVKLADFGVAG 149 (277)
T ss_pred CCccCcCCChhhEEEcC-CCCEEEcccccce
Confidence 46789999999999986 6789999998775
No 347
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=88.08 E-value=0.31 Score=43.34 Aligned_cols=31 Identities=29% Similarity=0.494 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||++++ .+.+.|.||..+..
T Consensus 118 ~~i~H~dl~~~ni~~~~-~~~~~l~dfg~~~~ 148 (256)
T cd06612 118 NKKIHRDIKAGNILLNE-EGQAKLADFGVSGQ 148 (256)
T ss_pred CCcccCCCCcceEEECC-CCcEEEcccccchh
Confidence 35799999999999986 57899999987664
No 348
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=88.08 E-value=0.3 Score=46.07 Aligned_cols=30 Identities=23% Similarity=0.381 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.|.||++++ ++.+.|+||.++.
T Consensus 153 ~givH~dlkp~Nill~~-~~~~kL~Dfg~~~ 182 (334)
T cd05100 153 QKCIHRDLAARNVLVTE-DNVMKIADFGLAR 182 (334)
T ss_pred CCeeccccccceEEEcC-CCcEEECCcccce
Confidence 46899999999999976 5789999998775
No 349
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=88.07 E-value=0.23 Score=44.77 Aligned_cols=29 Identities=21% Similarity=0.339 Sum_probs=25.4
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
.++|+|++|.||+++. .+.+.++||..+.
T Consensus 126 ~i~H~dlkp~nili~~-~~~~~l~dfg~~~ 154 (267)
T cd06645 126 GKMHRDIKGANILLTD-NGHVKLADFGVSA 154 (267)
T ss_pred CeecCCCCHHHEEECC-CCCEEECcceeee
Confidence 5899999999999976 6789999998765
No 350
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=88.06 E-value=0.3 Score=45.35 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++|.||++++ .+.+.|+||..+..
T Consensus 128 ~~ivH~dikp~Nill~~-~~~~kL~Dfg~~~~ 158 (303)
T cd05110 128 RRLVHRDLAARNVLVKS-PNHVKITDFGLARL 158 (303)
T ss_pred cCeeccccccceeeecC-CCceEEcccccccc
Confidence 45799999999999975 57899999987764
No 351
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=88.02 E-value=0.46 Score=43.16 Aligned_cols=30 Identities=27% Similarity=0.388 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+++.||+++. .+.+.++||..+.
T Consensus 118 ~~~~H~dl~p~nil~~~-~~~~~l~df~~~~ 147 (283)
T cd07835 118 HRVLHRDLKPQNLLIDR-EGALKLADFGLAR 147 (283)
T ss_pred CCeeCCCCCHHHEEEcC-CCcEEEeeccccc
Confidence 46899999999999987 6889999998875
No 352
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=88.01 E-value=0.4 Score=45.69 Aligned_cols=32 Identities=28% Similarity=0.349 Sum_probs=27.2
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
...++|+|++|.||++++ .+.+.++||..+..
T Consensus 197 ~~~i~H~dikp~Nil~~~-~~~~kl~dfg~~~~ 228 (343)
T cd05103 197 SRKCIHRDLAARNILLSE-NNVVKICDFGLARD 228 (343)
T ss_pred hCCeecCCCccCeEEEcC-CCcEEEEecccccc
Confidence 357899999999999986 67899999987753
No 353
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=88.01 E-value=0.44 Score=43.16 Aligned_cols=31 Identities=26% Similarity=0.413 Sum_probs=26.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.|.||++++ .+.+.++||.++..
T Consensus 120 ~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~~ 150 (277)
T cd06917 120 VGVIHRDIKAANILVTN-TGNVKLCDFGVAAL 150 (277)
T ss_pred CCcccCCcCHHHEEEcC-CCCEEEccCCceee
Confidence 46899999999999986 68899999987753
No 354
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=88.00 E-value=0.29 Score=49.86 Aligned_cols=30 Identities=20% Similarity=0.318 Sum_probs=25.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+||+|.|||+++ ++.+.|+||-.+.
T Consensus 162 ~~IiHrDLKP~NILl~~-~~~vkL~DFGls~ 191 (496)
T PTZ00283 162 KHMIHRDIKSANILLCS-NGLVKLGDFGFSK 191 (496)
T ss_pred CCEecCCCCHHHEEEeC-CCCEEEEecccCe
Confidence 35799999999999986 6789999998653
No 355
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=87.96 E-value=0.66 Score=41.58 Aligned_cols=31 Identities=16% Similarity=0.314 Sum_probs=26.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||.|.||++++ .+.+.++||..+..
T Consensus 116 ~~i~H~dl~p~nil~~~-~~~~~l~dfg~~~~ 146 (260)
T cd05611 116 RGIIHRDIKPENLLIDQ-TGHLKLTDFGLSRN 146 (260)
T ss_pred CCeecCCCCHHHeEECC-CCcEEEeeccccee
Confidence 35899999999999976 67899999987653
No 356
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=87.93 E-value=0.56 Score=42.33 Aligned_cols=30 Identities=23% Similarity=0.341 Sum_probs=25.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.+.||++++ ++.+.|.||..+.
T Consensus 125 ~~i~H~~l~p~nil~~~-~~~~~l~dfg~~~ 154 (266)
T cd06651 125 NMIVHRDIKGANILRDS-AGNVKLGDFGASK 154 (266)
T ss_pred CCeeeCCCCHHHEEECC-CCCEEEccCCCcc
Confidence 45899999999999976 5789999998775
No 357
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=87.84 E-value=0.54 Score=43.68 Aligned_cols=30 Identities=17% Similarity=0.369 Sum_probs=25.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+++.||+++. ++.+.|+||..+.
T Consensus 136 ~~ivH~dl~p~Nill~~-~~~~kL~dfg~~~ 165 (297)
T cd06659 136 QGVIHRDIKSDSILLTL-DGRVKLSDFGFCA 165 (297)
T ss_pred CCeecCCCCHHHeEEcc-CCcEEEeechhHh
Confidence 45899999999999976 6789999998764
No 358
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=87.84 E-value=0.6 Score=49.40 Aligned_cols=30 Identities=23% Similarity=0.428 Sum_probs=26.7
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
.++|+||+|.|||++. .+.+.|+||..+..
T Consensus 124 gIiHrDLKP~NILl~~-~g~vkL~DFGls~~ 153 (669)
T cd05610 124 GIIHRDLKPDNMLISN-EGHIKLTDFGLSKV 153 (669)
T ss_pred CEEeCCccHHHEEEcC-CCCEEEEeCCCCcc
Confidence 6899999999999976 67899999998864
No 359
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=87.69 E-value=0.51 Score=42.50 Aligned_cols=30 Identities=20% Similarity=0.375 Sum_probs=25.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+++.||++++ ++.+.++||.++.
T Consensus 126 ~~i~H~dlkp~Nili~~-~~~~kl~dfg~~~ 155 (268)
T cd05063 126 MNYVHRDLAARNILVNS-NLECKVSDFGLSR 155 (268)
T ss_pred CCeeccccchhhEEEcC-CCcEEECCCccce
Confidence 35899999999999976 6789999997765
No 360
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=87.68 E-value=0.3 Score=45.54 Aligned_cols=30 Identities=23% Similarity=0.305 Sum_probs=25.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ .+.+.++||..+.
T Consensus 160 ~~ivH~dlkp~Nil~~~-~~~~~l~dfg~~~ 189 (302)
T cd05055 160 KNCIHRDLAARNVLLTH-GKIVKICDFGLAR 189 (302)
T ss_pred CCeehhhhccceEEEcC-CCeEEECCCcccc
Confidence 35899999999999975 5778999998775
No 361
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=87.58 E-value=0.38 Score=42.25 Aligned_cols=34 Identities=24% Similarity=0.249 Sum_probs=28.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ 78 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~ 78 (317)
..++|+|+.+.||++++ ++.+.++||.++.....
T Consensus 120 ~~~~h~dl~p~ni~i~~-~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 120 NGIVHRDIKGANILVDS-DGVVKLADFGCAKRLGD 153 (260)
T ss_pred CCccccCCCHHHEEEcC-CCCEEEcccccEEeccc
Confidence 57899999999999986 68899999988775443
No 362
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=87.51 E-value=0.3 Score=44.82 Aligned_cols=30 Identities=23% Similarity=0.292 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ ++.+.++||..+.
T Consensus 138 ~~i~H~dikp~nili~~-~~~~~L~Dfg~~~ 167 (288)
T cd05061 138 KKFVHRDLAARNCMVAH-DFTVKIGDFGMTR 167 (288)
T ss_pred CCCcCCCCChheEEEcC-CCcEEECcCCccc
Confidence 46899999999999986 6789999998765
No 363
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=87.47 E-value=0.27 Score=44.74 Aligned_cols=31 Identities=19% Similarity=0.359 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||++++ .+.+.++||.++..
T Consensus 140 ~~ivH~dl~~~nili~~-~~~~~l~dfg~~~~ 170 (282)
T cd06636 140 HKVIHRDIKGQNVLLTE-NAEVKLVDFGVSAQ 170 (282)
T ss_pred CCcccCCCCHHHEEECC-CCCEEEeeCcchhh
Confidence 46899999999999986 67899999987663
No 364
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=87.43 E-value=0.3 Score=44.79 Aligned_cols=30 Identities=23% Similarity=0.418 Sum_probs=25.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ ++.+.|+||..+.
T Consensus 146 ~~ivH~dikp~nill~~-~~~~kl~dfg~~~ 175 (290)
T cd05045 146 MKLVHRDLAARNVLVAE-GRKMKISDFGLSR 175 (290)
T ss_pred CCeehhhhhhheEEEcC-CCcEEeccccccc
Confidence 46899999999999976 6789999997765
No 365
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=87.40 E-value=0.55 Score=42.19 Aligned_cols=30 Identities=20% Similarity=0.317 Sum_probs=25.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.|.||++++ .+.+.+.||.++.
T Consensus 125 ~~ivH~di~p~nil~~~-~~~~~l~dfg~~~ 154 (267)
T cd06628 125 RGIIHRDIKGANILVDN-KGGIKISDFGISK 154 (267)
T ss_pred cCcccccCCHHHEEEcC-CCCEEecccCCCc
Confidence 35799999999999976 6789999998775
No 366
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=87.28 E-value=0.29 Score=46.58 Aligned_cols=31 Identities=26% Similarity=0.423 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||+++. ++.+.|+||..+..
T Consensus 136 ~~i~H~dlkp~NIll~~-~~~~kL~dfg~~~~ 166 (342)
T cd07879 136 AGIIHRDLKPGNLAVNE-DCELKILDFGLARH 166 (342)
T ss_pred CCcccCCCCHHHEEECC-CCCEEEeeCCCCcC
Confidence 35799999999999986 68899999988764
No 367
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=87.26 E-value=0.51 Score=43.12 Aligned_cols=30 Identities=23% Similarity=0.300 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.|.||++++ ++.+.++||..+.
T Consensus 141 ~~i~H~dlkp~nil~~~-~~~~kL~dfg~~~ 170 (280)
T cd05092 141 LHFVHRDLATRNCLVGQ-GLVVKIGDFGMSR 170 (280)
T ss_pred CCeecccccHhhEEEcC-CCCEEECCCCcee
Confidence 46899999999999976 6789999998775
No 368
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=87.25 E-value=0.24 Score=45.14 Aligned_cols=30 Identities=23% Similarity=0.251 Sum_probs=25.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.+.||++++ ++.+.++||..+.
T Consensus 114 ~~i~H~di~p~Nil~~~-~~~~~l~dfg~~~ 143 (277)
T cd05577 114 RRIVYRDLKPENVLLDD-HGNVRISDLGLAV 143 (277)
T ss_pred CCcccCCCCHHHEEECC-CCCEEEccCcchh
Confidence 46799999999999976 6789999998765
No 369
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=87.23 E-value=0.45 Score=42.93 Aligned_cols=32 Identities=19% Similarity=0.273 Sum_probs=27.0
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|+.+.||++++ ++.+.+.||..+..-
T Consensus 119 ~~~~h~dl~p~nil~~~-~~~~~l~d~g~~~~~ 150 (287)
T cd07840 119 NGILHRDIKGSNILINN-DGVLKLADFGLARPY 150 (287)
T ss_pred CCceeccCcHHHeEEcC-CCCEEEccccceeec
Confidence 35899999999999986 678999999877643
No 370
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=87.18 E-value=0.36 Score=45.60 Aligned_cols=30 Identities=27% Similarity=0.388 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.+.||++++ ++.+.++||..+.
T Consensus 126 ~~i~H~dl~p~nill~~-~~~~kl~d~g~~~ 155 (337)
T cd07852 126 GNVIHRDLKPSNILLNS-DCRVKLADFGLAR 155 (337)
T ss_pred CCeecCCCCHHHEEEcC-CCcEEEeeccchh
Confidence 46899999999999986 6789999998665
No 371
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=87.17 E-value=0.85 Score=41.20 Aligned_cols=30 Identities=20% Similarity=0.251 Sum_probs=25.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||+++. .+.+.+.||+++.
T Consensus 136 ~~i~H~dlkp~Nili~~-~~~~~l~~~~~~~ 165 (275)
T cd05046 136 ARFVHRDLAARNCLVSS-QREVKVSLLSLSK 165 (275)
T ss_pred cCcccCcCccceEEEeC-CCcEEEccccccc
Confidence 35899999999999976 5778899998775
No 372
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=87.17 E-value=0.51 Score=43.33 Aligned_cols=30 Identities=20% Similarity=0.381 Sum_probs=26.4
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
.++|+|+.+.||+++. ++.+.+.||..+..
T Consensus 139 ~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~ 168 (310)
T cd07865 139 KILHRDMKAANILITK-DGILKLADFGLARA 168 (310)
T ss_pred CeeccCCCHHHEEECC-CCcEEECcCCCccc
Confidence 6899999999999976 67899999988763
No 373
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=87.17 E-value=0.48 Score=44.03 Aligned_cols=32 Identities=28% Similarity=0.387 Sum_probs=27.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|+.|.||++++ ++.+.+.||..+...
T Consensus 134 ~~i~H~dl~p~nIl~~~-~~~~kL~dfg~~~~~ 165 (307)
T cd06607 134 HERIHRDIKAGNILLTE-PGTVKLADFGSASLV 165 (307)
T ss_pred CCceecCCCcccEEECC-CCCEEEeecCcceec
Confidence 35799999999999976 678999999987654
No 374
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=87.16 E-value=0.41 Score=44.81 Aligned_cols=31 Identities=29% Similarity=0.448 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.|.||++++ ++.+.++||..+..
T Consensus 140 ~gi~H~dl~p~nili~~-~~~~kL~dfg~~~~ 170 (313)
T cd06633 140 HNMIHRDIKAGNILLTE-PGQVKLADFGSASK 170 (313)
T ss_pred CCeecCCCChhhEEECC-CCCEEEeecCCCcc
Confidence 35899999999999976 67899999988753
No 375
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=87.08 E-value=0.7 Score=43.75 Aligned_cols=31 Identities=26% Similarity=0.400 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||++++ .+.+.++||..+..
T Consensus 127 ~~iiH~dl~p~Nili~~-~~~~~l~dfg~~~~ 157 (328)
T cd07856 127 AGVVHRDLKPSNILINE-NCDLKICDFGLARI 157 (328)
T ss_pred CCcccCCCCHHHEeECC-CCCEEeCccccccc
Confidence 45899999999999976 67899999988763
No 376
>KOG0198|consensus
Probab=87.04 E-value=0.84 Score=44.25 Aligned_cols=33 Identities=24% Similarity=0.358 Sum_probs=27.5
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
...+.|+|+++.|||++..++.+.+-||--+.-
T Consensus 135 s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~ 167 (313)
T KOG0198|consen 135 SKGIVHCDIKPANILLDPSNGDVKLADFGLAKK 167 (313)
T ss_pred hCCEeccCcccceEEEeCCCCeEEeccCccccc
Confidence 568999999999999986447899999976653
No 377
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=87.03 E-value=0.69 Score=43.65 Aligned_cols=30 Identities=23% Similarity=0.346 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+++.||++++ ++.+.+.||..+.
T Consensus 126 ~~ivH~dlkp~Nil~~~-~~~~kl~dfg~~~ 155 (334)
T cd07855 126 ANVIHRDLKPSNLLVNE-DCELRIGDFGMAR 155 (334)
T ss_pred CCeecCCCCHHHEEEcC-CCcEEecccccce
Confidence 35899999999999986 6889999998764
No 378
>KOG0610|consensus
Probab=86.97 E-value=0.83 Score=45.86 Aligned_cols=45 Identities=16% Similarity=0.160 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 27 QSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 27 ~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
.+|+-...++|.. ..+.=+||+|.|||+.+ +|.|+|.|||.+...
T Consensus 185 aAEvl~ALEYLHm----lGivYRDLKPENILvre-dGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 185 AAEVLLALEYLHM----LGIVYRDLKPENILVRE-DGHIMLSDFDLSLRC 229 (459)
T ss_pred HHHHHHHHHHHHh----hceeeccCCcceeEEec-CCcEEeeeccccccC
Confidence 3444444445544 67889999999999987 699999999988754
No 379
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=86.95 E-value=0.67 Score=43.78 Aligned_cols=34 Identities=12% Similarity=0.237 Sum_probs=27.6
Q ss_pred eEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC
Q psy8745 208 LVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS 244 (317)
Q Consensus 208 ~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~ 244 (317)
++.+||+|+++... ++.....+++.||+||....
T Consensus 100 ~l~e~i~G~~~~~~---~~~~~~~~G~~LA~lH~~~~ 133 (307)
T TIGR00938 100 CLVEFLQGLSVGRP---TAMHCRPVGEVLAWMHLAGA 133 (307)
T ss_pred EEEEeCCCCCCCCC---CHHHHHHHHHHHHHHHhhhc
Confidence 58899999988643 45567899999999998654
No 380
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=86.81 E-value=0.72 Score=41.79 Aligned_cols=30 Identities=27% Similarity=0.371 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.+.||++++ .+.+.|.||..+.
T Consensus 118 ~~i~H~dl~~~ni~i~~-~~~~~l~d~~~~~ 147 (283)
T cd07830 118 HGFFHRDLKPENLLVSG-PEVVKIADFGLAR 147 (283)
T ss_pred CCcccCCCChhhEEEcC-CCCEEEeecccce
Confidence 46899999999999986 6889999998765
No 381
>KOG1006|consensus
Probab=86.79 E-value=0.22 Score=47.56 Aligned_cols=33 Identities=24% Similarity=0.440 Sum_probs=28.5
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
...-+.|+|++|.|||++. .|.|.|-||--||.
T Consensus 185 ~~lkiIHRDvKPSNILldr-~G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 185 EELKIIHRDVKPSNILLDR-HGDVKLCDFGICGQ 217 (361)
T ss_pred HHhhhhhccCChhheEEec-CCCEeeecccchHh
Confidence 3467799999999999986 68999999988874
No 382
>KOG1166|consensus
Probab=86.73 E-value=0.84 Score=50.42 Aligned_cols=30 Identities=17% Similarity=0.327 Sum_probs=23.8
Q ss_pred eeeeecCCCCCCeeeeC------CCCeEEEEeeccc
Q psy8745 44 VVFCHNDLLLGNIIYDE------TEDKVTFIDYEYA 73 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~------~~~~l~lIDfEya 73 (317)
..+.|+||+|.|+|+.. ....|+||||-++
T Consensus 813 ~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~s 848 (974)
T KOG1166|consen 813 MGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRS 848 (974)
T ss_pred cceecccCCcceeEeecccCCCCcccceEEEecccc
Confidence 57899999999999831 2357999999654
No 383
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=86.65 E-value=0.57 Score=43.68 Aligned_cols=31 Identities=29% Similarity=0.416 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||+++. ++.+.++||.++..
T Consensus 134 ~~i~H~dl~p~nil~~~-~~~~kl~dfg~~~~ 164 (308)
T cd06634 134 HNMIHRDVKAGNILLSE-PGLVKLGDFGSASI 164 (308)
T ss_pred CCcccCCCCHHhEEECC-CCcEEECCccccee
Confidence 46899999999999976 67899999988764
No 384
>KOG0612|consensus
Probab=86.58 E-value=0.67 Score=51.65 Aligned_cols=55 Identities=16% Similarity=0.385 Sum_probs=37.0
Q ss_pred hhhhhcCCCCHHHHH-HHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccc
Q psy8745 13 SRFQALFPGGVSQLQ-SDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYA 73 (317)
Q Consensus 13 ~~~~~~~p~~~~~L~-~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya 73 (317)
+++. .+|.+++..- +|+-..-+.+ ...++.|+|++|.|||+|. .|.|.|=||-.|
T Consensus 167 Sk~~-~~pE~~ArFY~aEiVlAldsl----H~mgyVHRDiKPDNvLld~-~GHikLADFGsC 222 (1317)
T KOG0612|consen 167 SKFD-RLPEDWARFYTAEIVLALDSL----HSMGYVHRDIKPDNVLLDK-SGHIKLADFGSC 222 (1317)
T ss_pred hhcC-CChHHHHHHHHHHHHHHHHHH----HhccceeccCCcceeEecc-cCcEeeccchhH
Confidence 5565 7774444322 2332222222 3579999999999999986 789999999655
No 385
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=86.58 E-value=0.39 Score=44.08 Aligned_cols=31 Identities=23% Similarity=0.409 Sum_probs=26.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||++++ ++.+.++||.++..
T Consensus 124 ~~i~H~dl~~~nil~~~-~~~~~l~dfg~~~~ 154 (287)
T cd06621 124 RKIIHRDIKPSNILLTR-KGQVKLCDFGVSGE 154 (287)
T ss_pred CCcccCCCCHHHEEEec-CCeEEEeecccccc
Confidence 46899999999999976 67899999998764
No 386
>KOG0600|consensus
Probab=86.56 E-value=0.74 Score=47.24 Aligned_cols=35 Identities=20% Similarity=0.243 Sum_probs=29.5
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCc
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNY 77 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~ 77 (317)
....+.|+|+++.|||+|. +|.+.|=||-.|....
T Consensus 235 H~~gvlHRDIK~SNiLidn-~G~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 235 HSRGVLHRDIKGSNILIDN-NGVLKIADFGLARFYT 269 (560)
T ss_pred hhcCeeeccccccceEEcC-CCCEEeccccceeecc
Confidence 4467899999999999986 7889999999887433
No 387
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=86.55 E-value=0.44 Score=43.05 Aligned_cols=31 Identities=19% Similarity=0.333 Sum_probs=26.2
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||++++ ++.+.++||..+..
T Consensus 125 ~g~~H~dl~p~nili~~-~~~~kl~dfg~~~~ 155 (269)
T cd05065 125 MNYVHRDLAARNILVNS-NLVCKVSDFGLSRF 155 (269)
T ss_pred CCEeecccChheEEEcC-CCcEEECCCccccc
Confidence 46899999999999976 57899999987653
No 388
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=86.55 E-value=0.48 Score=45.98 Aligned_cols=30 Identities=23% Similarity=0.268 Sum_probs=25.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||+++. .+.+.++||.++.
T Consensus 233 ~~ivH~Dlkp~Nill~~-~~~~kl~DfG~a~ 262 (375)
T cd05104 233 KNCIHRDLAARNILLTH-GRITKICDFGLAR 262 (375)
T ss_pred CCeeccCCchhhEEEEC-CCcEEEecCccce
Confidence 35799999999999986 5678899998775
No 389
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=86.53 E-value=0.6 Score=43.06 Aligned_cols=32 Identities=25% Similarity=0.173 Sum_probs=25.9
Q ss_pred eeeeecCCCCCCeeeeC---CCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDE---TEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~---~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||++++ ..+.+.++||..+..
T Consensus 127 ~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~ 161 (316)
T cd07842 127 NWVLHRDLKPANILVMGEGPERGVVKIGDLGLARL 161 (316)
T ss_pred CCEeeCCCCHHHEEEcCCCCccceEEECCCccccc
Confidence 35899999999999974 146799999987763
No 390
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=86.47 E-value=0.34 Score=43.02 Aligned_cols=31 Identities=26% Similarity=0.304 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||+++. .+.+.|+||.++..
T Consensus 121 ~~i~H~dl~~~ni~~~~-~~~~kl~d~~~~~~ 151 (258)
T cd06632 121 RNTVHRDIKGANILVDT-NGVVKLADFGMAKQ 151 (258)
T ss_pred CCcccCCCCHHHEEECC-CCCEEEccCcccee
Confidence 46899999999999976 67899999987764
No 391
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=86.47 E-value=0.59 Score=42.89 Aligned_cols=31 Identities=23% Similarity=0.488 Sum_probs=26.6
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||++++ ++.+.+.||.++..
T Consensus 135 ~~i~H~dl~p~nili~~-~~~~kl~dfg~~~~ 165 (302)
T cd07864 135 KNFLHRDIKCSNILLNN-KGQIKLADFGLARL 165 (302)
T ss_pred CCeecCCCCHHHEEECC-CCcEEeCccccccc
Confidence 36899999999999976 67899999987763
No 392
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=86.24 E-value=0.33 Score=43.34 Aligned_cols=31 Identities=23% Similarity=0.275 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+||.+.||++++ .+.+.|+||.++..
T Consensus 118 ~~i~H~dl~~~nil~~~-~~~~kl~d~g~~~~ 148 (264)
T cd06626 118 HGIVHRDIKPANIFLDH-NGVIKLGDFGCAVK 148 (264)
T ss_pred CCcccCCCCHHHEEECC-CCCEEEcccccccc
Confidence 35799999999999986 67899999988765
No 393
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=86.12 E-value=0.66 Score=41.82 Aligned_cols=31 Identities=23% Similarity=0.309 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|++++||++++ ++.+.++||..+.-
T Consensus 125 ~~i~H~dl~p~ni~i~~-~~~~~l~dfg~~~~ 155 (264)
T cd06653 125 NMIVHRDIKGANILRDS-AGNVKLGDFGASKR 155 (264)
T ss_pred CCEecCCCCHHHEEEcC-CCCEEECccccccc
Confidence 35899999999999976 67899999987763
No 394
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=86.11 E-value=0.52 Score=42.84 Aligned_cols=31 Identities=26% Similarity=0.419 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..+.|+|+.+.||++++ ++.+.++||..+..
T Consensus 120 ~~ivH~dl~p~ni~i~~-~~~~~l~dfg~~~~ 150 (277)
T cd06642 120 ERKIHRDIKAANVLLSE-QGDVKLADFGVAGQ 150 (277)
T ss_pred CCeeccCCChheEEEeC-CCCEEEcccccccc
Confidence 46899999999999976 67899999987753
No 395
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=85.95 E-value=0.98 Score=41.00 Aligned_cols=30 Identities=23% Similarity=0.369 Sum_probs=25.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.+.||++++ ++.+.++||.++.
T Consensus 119 ~~i~H~~l~p~nill~~-~~~~~l~dfg~~~ 148 (284)
T cd07860 119 HRVLHRDLKPQNLLINT-EGAIKLADFGLAR 148 (284)
T ss_pred CCeecCCCCHHHEEECC-CCCEEEeeccchh
Confidence 35899999999999986 5789999998764
No 396
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=85.84 E-value=0.98 Score=49.80 Aligned_cols=32 Identities=25% Similarity=0.225 Sum_probs=27.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|++|.||+++. .+.+.++||..|...
T Consensus 132 ~GIIHRDLKPeNILLd~-dg~vKLiDFGLAk~i 163 (932)
T PRK13184 132 KGVLHRDLKPDNILLGL-FGEVVILDWGAAIFK 163 (932)
T ss_pred CCccccCCchheEEEcC-CCCEEEEecCcceec
Confidence 36899999999999976 678999999988654
No 397
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=85.84 E-value=0.79 Score=47.21 Aligned_cols=30 Identities=23% Similarity=0.385 Sum_probs=25.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+++.||+++. ++.+.++||..+.
T Consensus 328 ~~ivHrDLKp~NILl~~-~~~~kL~DFGla~ 357 (507)
T PLN03224 328 IGIVHRDIKPENLLVTV-DGQVKIIDFGAAV 357 (507)
T ss_pred CCeecCCCchHhEEECC-CCcEEEEeCcCcc
Confidence 35799999999999976 5789999998874
No 398
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=85.82 E-value=0.86 Score=43.30 Aligned_cols=31 Identities=26% Similarity=0.369 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||++++ .+.+.|+||.++..
T Consensus 137 ~gi~H~dlkp~Nill~~-~~~~kL~dfg~~~~ 167 (343)
T cd07851 137 AGIIHRDLKPSNIAVNE-DCELKILDFGLARH 167 (343)
T ss_pred CCeecCCCCHHHeEECC-CCCEEEcccccccc
Confidence 45899999999999986 67899999988763
No 399
>PLN00181 protein SPA1-RELATED; Provisional
Probab=85.75 E-value=1 Score=48.36 Aligned_cols=31 Identities=10% Similarity=0.143 Sum_probs=25.0
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
...++|+||+|.|||++. .+.+.+|||..+.
T Consensus 98 ~~gIvHrDlKP~NiLl~~-~~~~k~~d~~~~~ 128 (793)
T PLN00181 98 SQGIVVHNVRPSCFVMSS-FNHVSFIESASCS 128 (793)
T ss_pred hCCeeeccCCchhEEEcc-cCcEEEeeccccC
Confidence 356999999999999975 5678888886553
No 400
>KOG0659|consensus
Probab=85.72 E-value=0.48 Score=45.20 Aligned_cols=33 Identities=18% Similarity=0.332 Sum_probs=27.9
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
...-+.|+|++|+|+|+++ +|.+.+=||-.|..
T Consensus 118 H~~~IlHRDlKPnNLLis~-~g~lKiADFGLAr~ 150 (318)
T KOG0659|consen 118 HSKWILHRDLKPNNLLISS-DGQLKIADFGLARF 150 (318)
T ss_pred HhhhhhcccCCccceEEcC-CCcEEeecccchhc
Confidence 3467889999999999987 68899999987763
No 401
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=85.63 E-value=1.2 Score=43.92 Aligned_cols=30 Identities=23% Similarity=0.328 Sum_probs=25.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ ++.+.++||..+.
T Consensus 256 ~~ivH~dikp~Nill~~-~~~~kL~DfGla~ 285 (400)
T cd05105 256 KNCVHRDLAARNVLLAQ-GKIVKICDFGLAR 285 (400)
T ss_pred CCeeCCCCChHhEEEeC-CCEEEEEeCCcce
Confidence 35899999999999986 5779999998775
No 402
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=85.42 E-value=0.83 Score=43.23 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=27.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..++|+|+.+.||+++. .+.+.|+||..+...
T Consensus 127 ~~i~H~dlkp~Nil~~~-~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 127 ANVLHRDLKPSNLLLNA-NCDLKICDFGLARTT 158 (337)
T ss_pred CCEecCCCCHHHEEEcC-CCCEEECcCcccccc
Confidence 46899999999999976 578999999877643
No 403
>KOG1164|consensus
Probab=85.31 E-value=0.4 Score=45.75 Aligned_cols=33 Identities=18% Similarity=0.354 Sum_probs=26.6
Q ss_pred CCeeeeecCCCCCCeeeeCCC----CeEEEEeecccc
Q psy8745 42 SPVVFCHNDLLLGNIIYDETE----DKVTFIDYEYAG 74 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~----~~l~lIDfEya~ 74 (317)
....++|+|++|+|+++.... ..|++|||-.|.
T Consensus 139 H~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar 175 (322)
T KOG1164|consen 139 HSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLAR 175 (322)
T ss_pred HhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCc
Confidence 357999999999999996432 469999996665
No 404
>KOG1167|consensus
Probab=85.28 E-value=1 Score=45.10 Aligned_cols=34 Identities=18% Similarity=0.354 Sum_probs=29.7
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
....+.|+|++|+|+|++...++-+||||-.|-.
T Consensus 149 h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~ 182 (418)
T KOG1167|consen 149 HKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQR 182 (418)
T ss_pred hccCccccCCCccccccccccCCceEEechhHHH
Confidence 4578999999999999987678889999988774
No 405
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=85.15 E-value=0.53 Score=44.85 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||++++ ++.+.++||..+..
T Consensus 139 ~~ivH~dlkp~NIll~~-~~~~kl~dfg~~~~ 169 (345)
T cd07877 139 ADIIHRDLKPSNLAVNE-DCELKILDFGLARH 169 (345)
T ss_pred CCeeecCCChHHEEEcC-CCCEEEeccccccc
Confidence 45899999999999986 67899999987653
No 406
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=85.11 E-value=0.83 Score=41.34 Aligned_cols=51 Identities=20% Similarity=0.203 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
...+...+..+-..+... ....++|+|+.+.||++++ ++.+.++||..+..
T Consensus 97 ~~~~~~~~~ql~~~l~~l-h~~~i~h~dl~p~ni~i~~-~~~~~l~d~g~~~~ 147 (274)
T cd06609 97 ETYIAFILREVLLGLEYL-HEEGKIHRDIKAANILLSE-EGDVKLADFGVSGQ 147 (274)
T ss_pred HHHHHHHHHHHHHHHHHH-HhCCcccCCCCHHHEEECC-CCCEEEccccccee
Confidence 444444444333333221 1245899999999999986 67899999987654
No 407
>KOG0605|consensus
Probab=85.08 E-value=0.46 Score=48.83 Aligned_cols=32 Identities=16% Similarity=0.411 Sum_probs=28.6
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
....+.|+|++|.|+|+|. .|.|.|=||-.|.
T Consensus 258 H~~gyIHRDIKPdNlLiD~-~GHiKLSDFGLs~ 289 (550)
T KOG0605|consen 258 HQLGYIHRDIKPDNLLIDA-KGHIKLSDFGLST 289 (550)
T ss_pred HHcCcccccCChhheeecC-CCCEeeccccccc
Confidence 3578999999999999987 7999999999884
No 408
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=84.88 E-value=0.77 Score=41.94 Aligned_cols=29 Identities=21% Similarity=0.478 Sum_probs=25.4
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
.+.|+|+.+.||++++ .+.+.++||..+.
T Consensus 124 ~i~H~dl~p~nil~~~-~~~~~l~d~gl~~ 152 (284)
T cd06620 124 RIMHRDIKPSNILVNS-RGQIKLCDFGVSG 152 (284)
T ss_pred CeeccCCCHHHEEECC-CCcEEEccCCccc
Confidence 5899999999999976 6789999998764
No 409
>KOG0578|consensus
Probab=84.87 E-value=1.4 Score=45.48 Aligned_cols=37 Identities=16% Similarity=0.263 Sum_probs=30.5
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhh
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAF 80 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~f 80 (317)
...+.|+|++..|||.+. +|.|.+.||-||+.....-
T Consensus 387 ~~gIiHrDIKSDnILL~~-~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 387 ARGIIHRDIKSDNILLTM-DGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred hcceeeeccccceeEecc-CCcEEEeeeeeeecccccc
Confidence 367899999999999976 6889999999998644433
No 410
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=84.86 E-value=1.4 Score=40.04 Aligned_cols=31 Identities=19% Similarity=0.236 Sum_probs=24.9
Q ss_pred eeeecCCCCCCeeeeCCC--CeEEEEeeccccC
Q psy8745 45 VFCHNDLLLGNIIYDETE--DKVTFIDYEYAGV 75 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~--~~l~lIDfEya~~ 75 (317)
.++|+|+.+.||+++..+ ..+.++||..+..
T Consensus 136 ~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~ 168 (277)
T cd05036 136 HFIHRDIAARNCLLTCKGPGRVAKIADFGMARD 168 (277)
T ss_pred CEeecccchheEEEeccCCCcceEeccCccccc
Confidence 589999999999997532 3588999987764
No 411
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=84.68 E-value=0.86 Score=43.29 Aligned_cols=32 Identities=19% Similarity=0.269 Sum_probs=26.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+++.||+++..++.+.++||.++..
T Consensus 133 ~givH~dikp~Nili~~~~~~~kl~dfg~~~~ 164 (342)
T cd07854 133 ANVLHRDLKPANVFINTEDLVLKIGDFGLARI 164 (342)
T ss_pred CCcccCCCCHHHEEEcCCCceEEECCccccee
Confidence 46899999999999975456788999998864
No 412
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=84.36 E-value=0.55 Score=42.44 Aligned_cols=29 Identities=21% Similarity=0.331 Sum_probs=25.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+++.||++++ +.+.++||..+.
T Consensus 119 ~~i~H~dl~p~ni~l~~--~~~kl~dfg~~~ 147 (282)
T cd07831 119 NGIFHRDIKPENILIKD--DILKLADFGSCR 147 (282)
T ss_pred CCceecccCHHHEEEcC--CCeEEEeccccc
Confidence 35899999999999986 889999998775
No 413
>KOG2345|consensus
Probab=84.36 E-value=2.2 Score=40.52 Aligned_cols=31 Identities=19% Similarity=0.323 Sum_probs=26.5
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
-+.|+|++|+||++.+ .+..+++||--+...
T Consensus 149 ~yAH~DiKP~NILls~-~~~~vl~D~GS~~~a 179 (302)
T KOG2345|consen 149 PYAHRDIKPANILLSD-SGLPVLMDLGSATQA 179 (302)
T ss_pred cccccCCCcceeEecC-CCceEEEeccCcccc
Confidence 5999999999999976 688999999776643
No 414
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=84.35 E-value=1.6 Score=39.51 Aligned_cols=32 Identities=13% Similarity=0.056 Sum_probs=24.1
Q ss_pred CeeeeecCCCCCCeeeeCCCC------eEEEEeecccc
Q psy8745 43 PVVFCHNDLLLGNIIYDETED------KVTFIDYEYAG 74 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~------~l~lIDfEya~ 74 (317)
...++|+|++|.||+++.+.. .+.++||..+.
T Consensus 123 ~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~ 160 (262)
T cd05077 123 DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPI 160 (262)
T ss_pred hCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCc
Confidence 346899999999999964221 27899997764
No 415
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=84.14 E-value=0.57 Score=42.55 Aligned_cols=30 Identities=27% Similarity=0.295 Sum_probs=26.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||++++ .+.+.++||.++.
T Consensus 136 ~~i~H~di~p~nil~~~-~~~~kl~d~g~~~ 165 (280)
T cd05043 136 RGVIHKDIAARNCVIDE-ELQVKITDNALSR 165 (280)
T ss_pred CCEeecccCHhhEEEcC-CCcEEECCCCCcc
Confidence 46899999999999976 5789999998875
No 416
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=84.06 E-value=1.3 Score=39.88 Aligned_cols=32 Identities=16% Similarity=0.207 Sum_probs=24.4
Q ss_pred CeeeeecCCCCCCeeeeCCCCe-------EEEEeecccc
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDK-------VTFIDYEYAG 74 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~-------l~lIDfEya~ 74 (317)
...++|+|+++.||+++.++.. +.+.||..+.
T Consensus 118 ~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 118 DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred HCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 3468999999999999753322 6788887764
No 417
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=83.91 E-value=1.6 Score=39.38 Aligned_cols=30 Identities=23% Similarity=0.382 Sum_probs=25.7
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
.++|+|+.+.||++++ ++.+.+.||..+..
T Consensus 118 ~i~H~~l~~~ni~~~~-~~~~~l~d~g~~~~ 147 (282)
T cd07829 118 RILHRDLKPQNILINR-DGVLKLADFGLARA 147 (282)
T ss_pred CcccCCCChheEEEcC-CCCEEEecCCcccc
Confidence 5799999999999976 68899999977653
No 418
>KOG0660|consensus
Probab=83.85 E-value=0.55 Score=46.08 Aligned_cols=37 Identities=16% Similarity=0.220 Sum_probs=31.4
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA 79 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~ 79 (317)
..-.+.|+||+|+|++++. +..+.+-||-+|...+..
T Consensus 142 HSAnViHRDLKPsNll~n~-~c~lKI~DFGLAR~~~~~ 178 (359)
T KOG0660|consen 142 HSANVIHRDLKPSNLLLNA-DCDLKICDFGLARYLDKF 178 (359)
T ss_pred hcccccccccchhheeecc-CCCEEeccccceeecccc
Confidence 4567899999999999987 678999999999876554
No 419
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=83.68 E-value=0.98 Score=41.75 Aligned_cols=30 Identities=20% Similarity=0.408 Sum_probs=25.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|+.+.||+++. .+.+.++||..+.
T Consensus 134 ~gi~H~dL~p~Nili~~-~~~~kL~dfg~~~ 163 (293)
T cd06647 134 NQVIHRDIKSDNILLGM-DGSVKLTDFGFCA 163 (293)
T ss_pred CCEeeccCCHHHEEEcC-CCCEEEccCccee
Confidence 45899999999999976 5789999998765
No 420
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=83.48 E-value=1.1 Score=42.25 Aligned_cols=31 Identities=26% Similarity=0.344 Sum_probs=26.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||+++. .+.+.++||..+..
T Consensus 138 ~~i~H~dl~~~nill~~-~~~~kl~dfg~~~~ 168 (335)
T PTZ00024 138 WYFMHRDLSPANIFINS-KGICKIADFGLARR 168 (335)
T ss_pred CCeecccccHHHeEECC-CCCEEECCccceee
Confidence 46899999999999976 67899999987753
No 421
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=83.39 E-value=0.38 Score=42.01 Aligned_cols=58 Identities=26% Similarity=0.489 Sum_probs=41.3
Q ss_pred cchhhhhcCC-CCceEEE-----ecC--ceEEEeecCccCCC--CCCCCcccHHHHHHHHHhhcccCC
Q psy8745 187 SPQILHRAGL-APRLYAE-----FDN--GLVYQYVRGVTITP--DSIREPHIHPLVARNMARLHKVHS 244 (317)
Q Consensus 187 ~~~~L~~~~~-gp~l~g~-----F~n--G~~e~fi~g~tL~~--~~l~~~~i~~~IA~~la~~H~~~~ 244 (317)
.++.|.++|+ .|++++. +.+ ..+.+|++|+++.. ..-..+.+...+|+.|+++|...+
T Consensus 43 ~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~ 110 (239)
T PF01636_consen 43 VLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPP 110 (239)
T ss_dssp HHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHT
T ss_pred HHHHHHhcCCCCceEEeecccccccccceEEEEEeccccccccccccccccccccchhhhhhcccccc
Confidence 3466788888 8888883 222 36899999999888 222345688899999999999853
No 422
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=83.28 E-value=1.4 Score=40.06 Aligned_cols=31 Identities=26% Similarity=0.401 Sum_probs=25.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.||+++. ++.+.++||..+..
T Consensus 122 ~~i~h~dl~p~nili~~-~~~~~l~d~g~~~~ 152 (280)
T cd06611 122 HKVIHRDLKAGNILLTL-DGDVKLADFGVSAK 152 (280)
T ss_pred CCcccCCCChhhEEECC-CCCEEEccCccchh
Confidence 35799999999999976 67899999976543
No 423
>KOG1187|consensus
Probab=83.02 E-value=1.4 Score=43.35 Aligned_cols=41 Identities=24% Similarity=0.344 Sum_probs=31.2
Q ss_pred HHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745 36 ALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ 78 (317)
Q Consensus 36 ~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~ 78 (317)
+|.... +..+.|+|+++.|||+|+ +-.-.+-||..|..++.
T Consensus 189 yLH~~~-~~~iiHrDiKssNILLD~-~~~aKlsDFGLa~~~~~ 229 (361)
T KOG1187|consen 189 YLHEGC-PPPIIHRDIKSSNILLDE-DFNAKLSDFGLAKLGPE 229 (361)
T ss_pred HHccCC-CCCEecCCCCHHHeeECC-CCCEEccCccCcccCCc
Confidence 344433 337899999999999986 56788999999866654
No 424
>KOG0596|consensus
Probab=82.59 E-value=0.92 Score=47.17 Aligned_cols=30 Identities=23% Similarity=0.389 Sum_probs=25.1
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
...+.|.||+|.|+|+- .|.|.||||--|.
T Consensus 478 ~~gIVHSDLKPANFLlV--kG~LKLIDFGIA~ 507 (677)
T KOG0596|consen 478 QHGIVHSDLKPANFLLV--KGRLKLIDFGIAN 507 (677)
T ss_pred HhceeecCCCcccEEEE--eeeEEeeeechhc
Confidence 45889999999999985 5899999995443
No 425
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=82.25 E-value=0.99 Score=44.65 Aligned_cols=29 Identities=28% Similarity=0.339 Sum_probs=25.6
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
.++|+|+++.|||+++ .+.+.++||.++.
T Consensus 259 ~ivHrdlkp~NiLl~~-~~~~kL~DfGla~ 287 (401)
T cd05107 259 NCVHRDLAARNVLICE-GKLVKICDFGLAR 287 (401)
T ss_pred CcCcccCCcceEEEeC-CCEEEEEecCcce
Confidence 5799999999999986 6789999998876
No 426
>KOG0593|consensus
Probab=81.89 E-value=0.84 Score=44.43 Aligned_cols=30 Identities=23% Similarity=0.369 Sum_probs=25.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
.-..|+|++|.|||++. ++.+.|-||-||.
T Consensus 120 ~n~IHRDIKPENILit~-~gvvKLCDFGFAR 149 (396)
T KOG0593|consen 120 NNCIHRDIKPENILITQ-NGVVKLCDFGFAR 149 (396)
T ss_pred cCeecccCChhheEEec-CCcEEeccchhhH
Confidence 34789999999999986 6889999998876
No 427
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=81.81 E-value=1.3 Score=39.62 Aligned_cols=31 Identities=19% Similarity=0.264 Sum_probs=26.0
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
...++|+|+.+.||++++ +.+.++||.++..
T Consensus 124 ~~~i~h~~l~~~nili~~--~~~~l~d~g~~~~ 154 (260)
T cd08222 124 QRRILHRDLKAKNIFLKN--NLLKIGDFGVSRL 154 (260)
T ss_pred HcCccccCCChhheEeec--CCEeecccCceee
Confidence 357899999999999964 6699999987754
No 428
>KOG0615|consensus
Probab=81.72 E-value=0.73 Score=46.27 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=25.8
Q ss_pred CeeeeecCCCCCCeeeeCCC--CeEEEEeeccccC
Q psy8745 43 PVVFCHNDLLLGNIIYDETE--DKVTFIDYEYAGV 75 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~--~~l~lIDfEya~~ 75 (317)
...+||+|++|.|||+..+. --|.+=||-.|-.
T Consensus 294 ~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~ 328 (475)
T KOG0615|consen 294 SQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV 328 (475)
T ss_pred HcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence 46899999999999996532 2466889987764
No 429
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=81.72 E-value=1.3 Score=41.34 Aligned_cols=34 Identities=15% Similarity=0.304 Sum_probs=28.2
Q ss_pred eEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC
Q psy8745 208 LVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS 244 (317)
Q Consensus 208 ~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~ 244 (317)
++.+|++|+++. ..++.-...+|+.||+||....
T Consensus 72 ~l~~~i~G~~~~---~~~~~~~~~~g~~La~lH~~~~ 105 (313)
T TIGR02906 72 VLTEWIEGRECD---FNNPIDLKKAAKGLALFHHASK 105 (313)
T ss_pred EEehhccCcCCC---CCCHHHHHHHHHHHHHHHHhCC
Confidence 788999999887 3456678889999999998653
No 430
>KOG0595|consensus
Probab=81.69 E-value=2.5 Score=42.36 Aligned_cols=42 Identities=19% Similarity=0.176 Sum_probs=32.5
Q ss_pred eeeeecCCCCCCeeeeCC-C----CeEEEEeeccccCCchhhhHHHH
Q psy8745 44 VVFCHNDLLLGNIIYDET-E----DKVTFIDYEYAGVNYQAFDIANH 85 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~-~----~~l~lIDfEya~~n~~~fDiAn~ 85 (317)
.-+.|+||+|.|||++.. . -.+.+=||-+|.+-.++.-.++.
T Consensus 128 ~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tl 174 (429)
T KOG0595|consen 128 NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETL 174 (429)
T ss_pred CCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHh
Confidence 578999999999999753 1 24779999999988766655443
No 431
>KOG1235|consensus
Probab=81.53 E-value=1.1 Score=46.67 Aligned_cols=31 Identities=23% Similarity=0.371 Sum_probs=23.6
Q ss_pred CeeeeecCCCCCCeeeeC---CCCeEEEEeeccc
Q psy8745 43 PVVFCHNDLLLGNIIYDE---TEDKVTFIDYEYA 73 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~---~~~~l~lIDfEya 73 (317)
...|.|+|.|||||++.. .+.++.+.|+-..
T Consensus 319 ~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~ 352 (538)
T KOG1235|consen 319 KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLY 352 (538)
T ss_pred hcCCccCCCCCCcEEEecCCCCCccEEEEccccc
Confidence 346999999999999984 2467888886433
No 432
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=81.46 E-value=2.8 Score=37.84 Aligned_cols=58 Identities=14% Similarity=0.259 Sum_probs=42.7
Q ss_pred CcchhhhhcCC-CCceEEEecCceEEEeecCccCCCCCCCC--------cccHHHHHHHHHhh-cccC
Q psy8745 186 PSPQILHRAGL-APRLYAEFDNGLVYQYVRGVTITPDSIRE--------PHIHPLVARNMARL-HKVH 243 (317)
Q Consensus 186 ~~~~~L~~~~~-gp~l~g~F~nG~~e~fi~g~tL~~~~l~~--------~~i~~~IA~~la~~-H~~~ 243 (317)
..++.|.+.|+ .|++|+...|..+-|||.|..+....|++ ..+...+...|+++ |...
T Consensus 78 r~L~rl~~~Gv~vP~pi~~~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~g 145 (197)
T cd05146 78 HNLKRMQKAGIPCPEVVVLKKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECN 145 (197)
T ss_pred HHHHHHHHcCCCCCeEEEecCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 56678889987 89999999999999999986333333333 23567788888887 7643
No 433
>KOG3021|consensus
Probab=81.10 E-value=1.8 Score=40.56 Aligned_cols=44 Identities=18% Similarity=0.121 Sum_probs=32.2
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHH
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFD 87 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~ 87 (317)
.-..+.|+||+.+|+-.|+ .+.-++.|= -+.|+++-||+|...+
T Consensus 208 I~PaLlHGDLW~GNva~D~-~~ePiIfDP-asfYgh~Efefgia~m 251 (313)
T KOG3021|consen 208 ILPALLHGDLWSGNVAEDG-AGEPIIFDP-ASFYGHSEFEFGIAKM 251 (313)
T ss_pred eehhhhccccccCcccccC-CCCceEeCc-hhhcCCcHHHHHHHHH
Confidence 3456789999999998876 344555553 3468999999997644
No 434
>KOG0665|consensus
Probab=80.83 E-value=0.93 Score=44.21 Aligned_cols=37 Identities=19% Similarity=0.304 Sum_probs=30.0
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA 79 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~ 79 (317)
....+.|+||+|.||+++. +..+.+.||-+|.-..+.
T Consensus 135 hs~~IihRdLkPsnivv~~-~~~lKi~dfg~ar~e~~~ 171 (369)
T KOG0665|consen 135 HSAGIIHRDLKPSNIVVNS-DCTLKILDFGLARTEDTD 171 (369)
T ss_pred HhcceeecccCcccceecc-hhheeeccchhhcccCcc
Confidence 3578999999999999976 577889999888754443
No 435
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=80.52 E-value=1.1 Score=42.50 Aligned_cols=27 Identities=26% Similarity=0.277 Sum_probs=23.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEY 72 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEy 72 (317)
..+.|+||..-|||+. ++.+++|||-=
T Consensus 186 a~LVHgDLSEyNiL~~--~~~p~iID~~Q 212 (268)
T COG1718 186 AGLVHGDLSEYNILVH--DGEPYIIDVSQ 212 (268)
T ss_pred cCcccccchhhheEEE--CCeEEEEECcc
Confidence 4789999999999997 47899999943
No 436
>PHA02988 hypothetical protein; Provisional
Probab=80.24 E-value=1.6 Score=40.36 Aligned_cols=28 Identities=14% Similarity=0.000 Sum_probs=23.3
Q ss_pred eeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 46 FCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 46 ~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..|+|+.|.||++++ ++.+.++||-.+.
T Consensus 144 ~~Hrdlkp~nill~~-~~~~kl~dfg~~~ 171 (283)
T PHA02988 144 KPYKNLTSVSFLVTE-NYKLKIICHGLEK 171 (283)
T ss_pred CCCCcCChhhEEECC-CCcEEEcccchHh
Confidence 349999999999986 5789999996654
No 437
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=79.85 E-value=1.8 Score=39.11 Aligned_cols=30 Identities=7% Similarity=0.184 Sum_probs=24.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..++|+|++|.||+++. ++.+.+.||..+.
T Consensus 126 ~~iiH~dikp~nili~~-~~~~~l~dfg~~~ 155 (266)
T cd05064 126 MGYVHKGLAAHKVLVNS-DLVCKISGFRRLQ 155 (266)
T ss_pred CCEeeccccHhhEEEcC-CCcEEECCCcccc
Confidence 45799999999999976 5778899987554
No 438
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=79.83 E-value=1.8 Score=34.35 Aligned_cols=54 Identities=22% Similarity=0.348 Sum_probs=40.3
Q ss_pred hhhhc-CCCCceEEEec----CceEEEeecCccCCCC-CCCCcccHHHHHHHHHhhcccC
Q psy8745 190 ILHRA-GLAPRLYAEFD----NGLVYQYVRGVTITPD-SIREPHIHPLVARNMARLHKVH 243 (317)
Q Consensus 190 ~L~~~-~~gp~l~g~F~----nG~~e~fi~g~tL~~~-~l~~~~i~~~IA~~la~~H~~~ 243 (317)
.|+.. ...|++++.+. ...+.+|++|.++... ....+.+...++..|+++|...
T Consensus 47 ~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~~~~~~~~~~~~~~~~l~~lh~~~ 106 (155)
T cd05120 47 LLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEVSEEEKEDIAEQLAELLAKLHQLP 106 (155)
T ss_pred HHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 34443 56788888887 6789999999888653 2234667888999999999864
No 439
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=79.52 E-value=1.7 Score=43.57 Aligned_cols=60 Identities=25% Similarity=0.416 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHH---HhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHH
Q psy8745 23 VSQLQSDWQYIETA---LSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIAN 84 (317)
Q Consensus 23 ~~~L~~e~~~L~~~---l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn 84 (317)
.+...+++..+... +.......-|-|+|+.-+|||++ +|+|.||||-.|..+++.=+|.+
T Consensus 317 ~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId--~GnvtLIDfklsRl~~~q~~isy 379 (488)
T COG5072 317 ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID--EGNVTLIDFKLSRLSYSQGIISY 379 (488)
T ss_pred cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee--cCceEEEEeeeeecccCCceeec
Confidence 34455555555543 23445677899999999999998 58999999999998888776654
No 440
>KOG0577|consensus
Probab=78.91 E-value=0.95 Score=47.61 Aligned_cols=36 Identities=28% Similarity=0.341 Sum_probs=30.7
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA 79 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~ 79 (317)
.....|+|++.||||+.+ +|.|.|-||--|++..|+
T Consensus 144 S~~~IHRDiKAGNILLse-~g~VKLaDFGSAsi~~PA 179 (948)
T KOG0577|consen 144 SHNRIHRDIKAGNILLSE-PGLVKLADFGSASIMAPA 179 (948)
T ss_pred HhhHHhhhccccceEecC-CCeeeeccccchhhcCch
Confidence 356789999999999986 788999999999877664
No 441
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=78.80 E-value=1.5 Score=37.98 Aligned_cols=57 Identities=19% Similarity=0.285 Sum_probs=41.2
Q ss_pred chhhhhcC-CCCceEEEecC--ceEEEeecCccCCCCCCCCc-ccHHHHHHHHHhhcccCC
Q psy8745 188 PQILHRAG-LAPRLYAEFDN--GLVYQYVRGVTITPDSIREP-HIHPLVARNMARLHKVHS 244 (317)
Q Consensus 188 ~~~L~~~~-~gp~l~g~F~n--G~~e~fi~g~tL~~~~l~~~-~i~~~IA~~la~~H~~~~ 244 (317)
+..|...| ..|.+++.-++ ..+.+|++|.+|..--.... .+...||+.|+.+|....
T Consensus 51 l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~~~~~~i~~~l~~lH~~gi 111 (199)
T TIGR03724 51 LSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGNDELLREIGRLVGKLHKAGI 111 (199)
T ss_pred HHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHHHHHHHHHHHHHHHHHCCe
Confidence 34455556 46778888777 78899999998864321222 688999999999998654
No 442
>PF10009 DUF2252: Uncharacterized protein conserved in bacteria (DUF2252); InterPro: IPR018721 This domain has no known function.
Probab=78.45 E-value=8.4 Score=38.38 Aligned_cols=49 Identities=20% Similarity=0.212 Sum_probs=38.7
Q ss_pred CCCeeeeecCCCCCCeee-eCCCCeEE--EEeeccccCCchhhhHHHHHHHh
Q psy8745 41 KSPVVFCHNDLLLGNIIY-DETEDKVT--FIDYEYAGVNYQAFDIANHFDEF 89 (317)
Q Consensus 41 ~~~~v~CHnDl~~~NiL~-~~~~~~l~--lIDfEya~~n~~~fDiAn~~~E~ 89 (317)
..+.|++++|+|.+|+=. .+.++.|+ +=|||=+..++..|||--+....
T Consensus 40 ~~~~v~icGD~Hl~NFG~~~~~~~~~vFdiNDFDEa~~gp~~wDl~Rla~Si 91 (385)
T PF10009_consen 40 SGPPVWICGDAHLENFGAFASPEGRVVFDINDFDEALPGPFEWDLKRLATSI 91 (385)
T ss_pred CCCceEEeccchhhccCcccCCCCCEEecCCCCCcCCcCChHHHHHHHHHHH
Confidence 467899999999999943 33345555 77999999999999997766543
No 443
>PRK10271 thiK thiamine kinase; Provisional
Probab=78.44 E-value=5.2 Score=36.02 Aligned_cols=56 Identities=13% Similarity=-0.025 Sum_probs=43.4
Q ss_pred EEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCCCCCCCcchHHHHHHHhhccccCCCc
Q psy8745 209 VYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHSNMKTPKLWSTGKHMLSLIPRTYSNP 269 (317)
Q Consensus 209 ~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~~~~~p~lw~~i~kwl~~~~~~f~d~ 269 (317)
+=+|++|.+++.. .....+|..++++|...+.+..=+++..|.++...+.+...++
T Consensus 2 lv~Wl~Ge~~~~~-----~~~~~La~~l~~LH~~p~~~~~~~l~~~i~~Yw~~l~~~~~~~ 57 (188)
T PRK10271 2 AVDYLPGEVKSYL-----PDTNELAGLLYHLHQQPRFGWRITLLPLLEQYWQQSDPARRTP 57 (188)
T ss_pred cccccCCCcCCCc-----cCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhccccCCH
Confidence 4589999999855 4778899999999997654444469999999999886654443
No 444
>KOG0582|consensus
Probab=78.02 E-value=3.2 Score=42.28 Aligned_cols=27 Identities=30% Similarity=0.505 Sum_probs=23.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeec
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYE 71 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfE 71 (317)
..-.|+|++++|||+++ +|.|.|=||.
T Consensus 145 ~G~IHRdvKAgnILi~~-dG~VkLadFg 171 (516)
T KOG0582|consen 145 NGHIHRDVKAGNILIDS-DGTVKLADFG 171 (516)
T ss_pred cCceecccccccEEEcC-CCcEEEcCce
Confidence 46799999999999987 6889999993
No 445
>KOG0670|consensus
Probab=77.89 E-value=1.6 Score=45.39 Aligned_cols=31 Identities=23% Similarity=0.378 Sum_probs=25.8
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..+.|.|++|.|||++++..-|.|-||--|+
T Consensus 555 c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 555 CGVLHADIKPDNILVNESKNILKLCDFGSAS 585 (752)
T ss_pred cCeeecccCccceEeccCcceeeeccCcccc
Confidence 4689999999999999866667788887665
No 446
>KOG0662|consensus
Probab=77.89 E-value=2.6 Score=38.42 Aligned_cols=27 Identities=22% Similarity=0.434 Sum_probs=23.2
Q ss_pred eecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 47 CHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 47 CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
.|+||+|.|+|++. +|.+.+-||-.|.
T Consensus 123 lhrdlkpqnllin~-ngelkladfglar 149 (292)
T KOG0662|consen 123 LHRDLKPQNLLINR-NGELKLADFGLAR 149 (292)
T ss_pred hhccCCcceEEecc-CCcEEecccchhh
Confidence 46899999999986 7899999997663
No 447
>KOG4717|consensus
Probab=77.58 E-value=2.3 Score=44.27 Aligned_cols=47 Identities=15% Similarity=0.239 Sum_probs=38.9
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHH
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDE 88 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E 88 (317)
..+-+.|+||+|.|+.+.++-|-|.|-||-|+.---|+--|...+..
T Consensus 135 HqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGS 181 (864)
T KOG4717|consen 135 HQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGS 181 (864)
T ss_pred hhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccch
Confidence 44667899999999999887888999999999988888777665443
No 448
>KOG0032|consensus
Probab=77.45 E-value=2.2 Score=42.33 Aligned_cols=40 Identities=18% Similarity=0.312 Sum_probs=32.0
Q ss_pred CeeeeecCCCCCCeeeeCCC---CeEEEEeeccccCCchhhhH
Q psy8745 43 PVVFCHNDLLLGNIIYDETE---DKVTFIDYEYAGVNYQAFDI 82 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~---~~l~lIDfEya~~n~~~fDi 82 (317)
...++|+|++|.|+|+.... +.+.++||-.+.+..+...+
T Consensus 153 ~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~ 195 (382)
T KOG0032|consen 153 SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERL 195 (382)
T ss_pred hCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceE
Confidence 37899999999999996432 37999999999887774433
No 449
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=77.44 E-value=3.5 Score=38.71 Aligned_cols=27 Identities=15% Similarity=0.288 Sum_probs=22.5
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeec
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYE 71 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfE 71 (317)
..++|+|++|.||+++. ++.+.+.|+.
T Consensus 120 ~~iiH~dlkp~Nil~~~-~~~~~l~~~~ 146 (327)
T cd08227 120 MGYVHRSVKASHILISV-DGKVYLSGLR 146 (327)
T ss_pred CCEecCCCChhhEEEec-CCcEEEcccc
Confidence 45899999999999976 5778888874
No 450
>KOG1035|consensus
Probab=77.33 E-value=2.5 Score=47.59 Aligned_cols=32 Identities=28% Similarity=0.291 Sum_probs=28.3
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++.|+||+|.||.+++ .+.|.+.||-.|..
T Consensus 715 ~~giIHRDLKP~NIFLd~-~~~VKIGDFGLAt~ 746 (1351)
T KOG1035|consen 715 DQGIIHRDLKPRNIFLDS-RNSVKIGDFGLATD 746 (1351)
T ss_pred hCceeeccCCcceeEEcC-CCCeeecccccchh
Confidence 356999999999999986 78899999988886
No 451
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=75.29 E-value=5.2 Score=36.15 Aligned_cols=30 Identities=23% Similarity=0.387 Sum_probs=25.3
Q ss_pred eeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 46 FCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 46 ~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
++|+||.+.||++++ ++.+.|-||.++...
T Consensus 124 iiH~~l~~~nill~~-~~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 124 IIHGNLSPSNILLDS-NGQVKLSDFGLSRPI 153 (259)
T ss_dssp EEEST-SGGGEEEET-TTEEEEESTTTGEET
T ss_pred ccccccccccccccc-ccccccccccccccc
Confidence 899999999999987 678999999877654
No 452
>PRK05231 homoserine kinase; Provisional
Probab=75.28 E-value=3.4 Score=38.93 Aligned_cols=34 Identities=15% Similarity=0.168 Sum_probs=27.0
Q ss_pred eEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC
Q psy8745 208 LVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS 244 (317)
Q Consensus 208 ~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~ 244 (317)
.+.+|++|+.+... ++...+.+++.||+||....
T Consensus 99 ~l~~~l~G~~~~~~---~~~~~~~~G~~LA~lH~~~~ 132 (319)
T PRK05231 99 AIVTFLEGKWPRAP---TAAHCAEVGEMLARMHLAGR 132 (319)
T ss_pred EEEEecCCCCCCCC---CHHHHHHHHHHHHHHHhhhh
Confidence 68899999986542 45667889999999998653
No 453
>KOG1989|consensus
Probab=74.65 E-value=3.6 Score=44.32 Aligned_cols=67 Identities=13% Similarity=0.186 Sum_probs=47.1
Q ss_pred chhhhhcCCCCHHHHHHHHHHHHHHHhc-CCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhh
Q psy8745 12 SSRFQALFPGGVSQLQSDWQYIETALSK-TKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFD 81 (317)
Q Consensus 12 ~~~~~~~~p~~~~~L~~e~~~L~~~l~~-~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fD 81 (317)
|.|++..|- .+++.+-+--+-+.+.. .-.+.=+.|+||+..|||++. ++.++|=||--|+-..+..+
T Consensus 134 n~Rlq~~lt--e~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~-~g~~KLCDFGSatt~~~~~~ 201 (738)
T KOG1989|consen 134 NTRLQTRLT--EDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSA-DGNYKLCDFGSATTKILSPT 201 (738)
T ss_pred HHHHhccCC--hHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcC-CCCEEeCcccccccccCCCc
Confidence 888888874 55555545444433332 234556899999999999976 67899999988876655553
No 454
>KOG0586|consensus
Probab=74.54 E-value=1.5 Score=45.76 Aligned_cols=45 Identities=27% Similarity=0.501 Sum_probs=35.9
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHHHhhC
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFDEFAG 91 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~E~~~ 91 (317)
....+||+||+..||+++. +.++.+-||+++.. ||.+..+..||+
T Consensus 172 H~k~ivHrdLk~eNilL~~-~mnikIaDfgfS~~----~~~~~~lqt~cg 216 (596)
T KOG0586|consen 172 HSKNIVHRDLKAENILLDE-NMNIKIADFGFSTF----FDYGLMLQTFCG 216 (596)
T ss_pred hhcceeccccchhhccccc-ccceeeecccccee----ecccccccccCC
Confidence 3468999999999999986 56699999999874 556666666665
No 455
>KOG0661|consensus
Probab=74.19 E-value=3 Score=42.71 Aligned_cols=53 Identities=25% Similarity=0.294 Sum_probs=36.0
Q ss_pred hhcCCCCHHHHHHHHHHHHHHHhcC--CCCeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 16 QALFPGGVSQLQSDWQYIETALSKT--KSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 16 ~~~~p~~~~~L~~e~~~L~~~l~~~--~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
...|+ ...++.-+ ...++.. -....|-|+|++|.|||+.. +.-|.+=||-.|.
T Consensus 104 ~r~fs--e~~irnim---~QilqGL~hiHk~GfFHRDlKPENiLi~~-~~~iKiaDFGLAR 158 (538)
T KOG0661|consen 104 NRLFS--ESDIRNIM---YQILQGLAHIHKHGFFHRDLKPENILISG-NDVIKIADFGLAR 158 (538)
T ss_pred CCcCC--HHHHHHHH---HHHHHHHHHHHhcCcccccCChhheEecc-cceeEeccccccc
Confidence 55565 55555533 3333322 24678999999999999975 5678899997664
No 456
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=74.11 E-value=3 Score=39.19 Aligned_cols=28 Identities=11% Similarity=0.214 Sum_probs=22.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEY 72 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEy 72 (317)
..++|+|++|.||+++. .+.+.+.|+..
T Consensus 120 ~~ivHrDlkp~Nill~~-~~~~~~~~~~~ 147 (328)
T cd08226 120 NGYIHRNIKASHILISG-DGLVSLSGLSH 147 (328)
T ss_pred CCeecCCCCHHHEEEeC-CCcEEEechHH
Confidence 46899999999999976 57788887643
No 457
>KOG0663|consensus
Probab=73.63 E-value=2.1 Score=42.18 Aligned_cols=32 Identities=19% Similarity=0.291 Sum_probs=27.4
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
...-+.|+||++.|+|++. .|.+.+=||-.|.
T Consensus 194 H~~wilHRDLK~SNLLm~~-~G~lKiaDFGLAR 225 (419)
T KOG0663|consen 194 HDNWILHRDLKTSNLLLSH-KGILKIADFGLAR 225 (419)
T ss_pred hhceeEecccchhheeecc-CCcEEecccchhh
Confidence 3568899999999999976 6889999997765
No 458
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=73.60 E-value=4.9 Score=36.64 Aligned_cols=31 Identities=13% Similarity=0.091 Sum_probs=22.6
Q ss_pred eeeeecCCCCCCeeeeCCC------CeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETE------DKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~------~~l~lIDfEya~ 74 (317)
..++|+||+|.||++++.. ..+.+.||..+.
T Consensus 136 ~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~ 172 (274)
T cd05076 136 KNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSF 172 (274)
T ss_pred CCccCCCCCcccEEEeccCcccCccceeeecCCcccc
Confidence 4579999999999996421 236788887553
No 459
>KOG0585|consensus
Probab=72.60 E-value=2.3 Score=43.64 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=27.3
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
..+.|+|++|.|+|+++ .|.|.+=||--+..-
T Consensus 229 QgiiHRDIKPsNLLl~~-~g~VKIsDFGVs~~~ 260 (576)
T KOG0585|consen 229 QGIIHRDIKPSNLLLSS-DGTVKISDFGVSNEF 260 (576)
T ss_pred cCeeccccchhheEEcC-CCcEEeeccceeeec
Confidence 57899999999999987 589999999766643
No 460
>KOG0192|consensus
Probab=72.35 E-value=5.6 Score=39.23 Aligned_cols=33 Identities=21% Similarity=0.297 Sum_probs=26.4
Q ss_pred eeecCCCCCCeeeeCCCCeEEEEeeccccCCch
Q psy8745 46 FCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQ 78 (317)
Q Consensus 46 ~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~ 78 (317)
+.|+||++.|||++.+...+.+=||-.+..-..
T Consensus 164 iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 164 IIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred eeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 999999999999987323788999988765443
No 461
>COG3281 Ble Uncharacterized protein, probably involved in trehalose biosynthesis [Carbohydrate transport and metabolism]
Probab=72.18 E-value=2.1 Score=42.33 Aligned_cols=44 Identities=25% Similarity=0.417 Sum_probs=34.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccc---------cCCchhhhHHHHHHHh
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYA---------GVNYQAFDIANHFDEF 89 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya---------~~n~~~fDiAn~~~E~ 89 (317)
+.=.|+||+-+-+|+. +++.+|||||-= -...|.-|+|..+..+
T Consensus 284 l~RvHGDLHLgQVLvt--~g~~~liDFEGEPsRpl~err~~~sPlrDvAgllRS~ 336 (438)
T COG3281 284 LQRVHGDLHLGQVLVT--PGRALLIDFEGEPSRPLDERRAPDSPLRDVAGLLRSF 336 (438)
T ss_pred HHHHhccceehheeee--CCcEEEEecCCCCCCChhhccCCCCchHHHHHHHHHh
Confidence 3457999999999996 589999999852 3456778888887753
No 462
>KOG0664|consensus
Probab=71.73 E-value=2.4 Score=40.88 Aligned_cols=30 Identities=20% Similarity=0.356 Sum_probs=24.4
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
..+.|+|++|||+|+++ +--+.+-||-.|.
T Consensus 175 A~ILHRDIKPGNLLVNS-NCvLKICDFGLAR 204 (449)
T KOG0664|consen 175 ANILHRDIKPGNLLVNS-NCILKICDFGLAR 204 (449)
T ss_pred cchhhccCCCccEEecc-CceEEeccccccc
Confidence 46789999999999986 4556688987765
No 463
>KOG0579|consensus
Probab=71.40 E-value=4 Score=43.58 Aligned_cols=32 Identities=25% Similarity=0.431 Sum_probs=26.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
.-+.|+||+.||||+.- +|.|.|-||--+.-|
T Consensus 149 ~~iIHRDLKAGNiL~Tl-dGdirLADFGVSAKn 180 (1187)
T KOG0579|consen 149 QNIIHRDLKAGNILLTL-DGDIRLADFGVSAKN 180 (1187)
T ss_pred cchhhhhccccceEEEe-cCcEeeecccccccc
Confidence 46799999999999975 688999999876543
No 464
>KOG3087|consensus
Probab=71.29 E-value=5.1 Score=36.72 Aligned_cols=59 Identities=19% Similarity=0.326 Sum_probs=39.2
Q ss_pred CcchhhhhcCC-CCceEEE--ecCceEEEeecCc---------cCCCCCCCC--cccHHHHHHHHHhhcccCC
Q psy8745 186 PSPQILHRAGL-APRLYAE--FDNGLVYQYVRGV---------TITPDSIRE--PHIHPLVARNMARLHKVHS 244 (317)
Q Consensus 186 ~~~~~L~~~~~-gp~l~g~--F~nG~~e~fi~g~---------tL~~~~l~~--~~i~~~IA~~la~~H~~~~ 244 (317)
+.+..+...|+ +|+||.+ -.|-..=|||+|- ++.++.--. ..+.+.|.+.++++|.-..
T Consensus 62 r~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndi 134 (229)
T KOG3087|consen 62 RLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDI 134 (229)
T ss_pred HHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCe
Confidence 34456667788 8888874 3444566999992 233332222 2578899999999997653
No 465
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=70.59 E-value=2.5 Score=37.00 Aligned_cols=30 Identities=30% Similarity=0.422 Sum_probs=25.4
Q ss_pred eeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 45 VFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 45 v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
.++|+|+.|.||+++.....+.++||..+.
T Consensus 121 ~~~hrd~kp~nil~~~~~~~~~l~dfg~~~ 150 (384)
T COG0515 121 GIIHRDIKPENILLDRDGRVVKLIDFGLAK 150 (384)
T ss_pred CeeccCCCHHHeeecCCCCeEEEeccCcce
Confidence 499999999999998632369999999887
No 466
>cd05169 PIKKc_TOR TOR (Target of rapamycin), catalytic domain; The TOR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TOR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). TOR contains a rapamycin binding domain, a catalytic domain, and a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. It is also called FRAP (FK506 binding protein 12-rapamycin associated protein). TOR is a central component of the eukaryotic growth regulatory network. It controls the expression of many genes transcribed by all three RNA polymerases. It associates with
Probab=69.97 E-value=5.4 Score=37.64 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=28.0
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccc
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYA 73 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya 73 (317)
...++.=+|-+++|||++...|+++-|||.++
T Consensus 179 ~~YilglgDRH~~NIll~~~tG~v~HIDfg~~ 210 (280)
T cd05169 179 VGYILGLGDRHPSNIMIDRLTGKVIHIDFGDC 210 (280)
T ss_pred HHhheeccCCCcceEEEEcCCCCEEEEecHHH
Confidence 45788899999999999987899999999655
No 467
>KOG2268|consensus
Probab=69.92 E-value=7.2 Score=38.78 Aligned_cols=27 Identities=30% Similarity=0.460 Sum_probs=23.9
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeec
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYE 71 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfE 71 (317)
..+.|+|++.=|||+.+ .+.+++|||-
T Consensus 221 ~GlIHgDFNEFNimv~d-d~~i~vIDFP 247 (465)
T KOG2268|consen 221 HGLIHGDFNEFNIMVKD-DDKIVVIDFP 247 (465)
T ss_pred cCceecccchheeEEec-CCCEEEeech
Confidence 47899999999999986 6789999994
No 468
>KOG0604|consensus
Probab=68.85 E-value=5.3 Score=39.02 Aligned_cols=42 Identities=21% Similarity=0.401 Sum_probs=32.1
Q ss_pred CeeeeecCCCCCCeeeeCC--CCeEEEEeeccccCCchhhhHHH
Q psy8745 43 PVVFCHNDLLLGNIIYDET--EDKVTFIDYEYAGVNYQAFDIAN 84 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~--~~~l~lIDfEya~~n~~~fDiAn 84 (317)
..-+.|+|++|.|+|+.++ +-.+.|-||-||.-...-.|+-.
T Consensus 179 ~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~T 222 (400)
T KOG0604|consen 179 SMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMT 222 (400)
T ss_pred hcchhhccCChhheeeecCCCCcceEecccccccccCCCccccC
Confidence 3568999999999999653 23577999999987776555543
No 469
>KOG0591|consensus
Probab=68.64 E-value=7.3 Score=37.82 Aligned_cols=31 Identities=19% Similarity=0.244 Sum_probs=25.4
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
...+.|+|++|+||.++. +|.|.|=||-.+.
T Consensus 146 r~~VmHRDIKPaNIFl~~-~gvvKLGDfGL~r 176 (375)
T KOG0591|consen 146 RGTVMHRDIKPANIFLTA-NGVVKLGDFGLGR 176 (375)
T ss_pred ccceeeccCcchheEEcC-CCceeeccchhHh
Confidence 356899999999999986 6888899986544
No 470
>cd00142 PI3Kc_like Phosphoinositide 3-kinase (PI3K)-like family, catalytic domain; The PI3K-like catalytic domain family is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members of the family include PI3K, phosphoinositide 4-kinase (PI4K), PI3K-related protein kinases (PIKKs), and TRansformation/tRanscription domain-Associated Protein (TRRAP). PI3Ks catalyze the transfer of the gamma-phosphoryl group from ATP to the 3-hydroxyl of the inositol ring of D-myo-phosphatidylinositol (PtdIns) or its derivatives, while PI4K catalyze the phosphorylation of the 4-hydroxyl of PtdIns. PIKKs are protein kinases that catalyze the phosphorylation of serine/threonine residues, especially those that are followed by a glutamine. PI3Ks play an important role in a variety of fundamental cellular processes, including cell motility, the
Probab=68.44 E-value=4.5 Score=36.82 Aligned_cols=39 Identities=21% Similarity=0.243 Sum_probs=32.0
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhh
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAF 80 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~f 80 (317)
...++.=+|-+++|||++..+|.+.-|||.++--..+.+
T Consensus 126 ~~YilglgDRh~~NIli~~~~G~~~hIDfg~~~~~~~~~ 164 (219)
T cd00142 126 AGYILGIGDRHPDNIMIDLDTGKLFHIDFGFIFGKRKKF 164 (219)
T ss_pred HHHHhccCCCCCccEEEECCCCeEEEEeeHHhhCcCcCC
Confidence 356888899999999999768999999998876555443
No 471
>KOG0607|consensus
Probab=68.21 E-value=7.5 Score=38.38 Aligned_cols=49 Identities=20% Similarity=0.251 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCC--CeEEEEeeccccC
Q psy8745 23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETE--DKVTFIDYEYAGV 75 (317)
Q Consensus 23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~--~~l~lIDfEya~~ 75 (317)
...+.+++..-.++|.. ..+.|+||+|.|||-.+.+ ..|.+-|||.++-
T Consensus 178 As~vvkdia~aLdFlH~----kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 178 ASRVVKDIASALDFLHT----KGIAHRDLKPENILCESPNKVSPVKICDFDLGSG 228 (463)
T ss_pred HHHHHHHHHHHHHHHhh----cCcccccCCccceeecCCCCcCceeeeccccccc
Confidence 33444455444445443 5699999999999975421 3578999988763
No 472
>cd05172 PIKKc_DNA-PK DNA-dependent protein kinase (DNA-PK), catalytic domain; The DNA-PK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. DNA-PK is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). DNA-PK is comprised of a regulatory subunit, containing the Ku70/80 subunit, and a catalytic subunit, which contains a NUC194 domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. It is part of a multi-component system involved in non-homologous end joining (NHEJ), a process of repairing double st
Probab=68.08 E-value=8.5 Score=35.63 Aligned_cols=35 Identities=23% Similarity=0.134 Sum_probs=29.5
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
...++.=+|-+++|||++...|++.-|||.++--+
T Consensus 134 ~~YilglgDRH~~NIli~~~tG~v~HIDfg~~f~~ 168 (235)
T cd05172 134 SHWILGIGDRHLSNFLVDLETGGLVGIDFGHAFGT 168 (235)
T ss_pred HhheeeccCCCcccEEEECCCCcEEEEeeHhhhcc
Confidence 45789999999999999866799999999866533
No 473
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=67.96 E-value=5.5 Score=44.49 Aligned_cols=31 Identities=19% Similarity=0.171 Sum_probs=23.8
Q ss_pred eeeeecCCCCCCeeeeCC----------------CCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDET----------------EDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~----------------~~~l~lIDfEya~ 74 (317)
..++|+||+|.|||++.. ...+.|+||..+.
T Consensus 144 k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr 190 (1021)
T PTZ00266 144 ERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSK 190 (1021)
T ss_pred CCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccc
Confidence 458999999999999531 1237899998765
No 474
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=67.93 E-value=4.6 Score=38.10 Aligned_cols=39 Identities=28% Similarity=0.315 Sum_probs=31.7
Q ss_pred EEecCceEEEeec-CccCCCCCCCCcccHHHHHHHHHhhcccCC
Q psy8745 202 AEFDNGLVYQYVR-GVTITPDSIREPHIHPLVARNMARLHKVHS 244 (317)
Q Consensus 202 g~F~nG~~e~fi~-g~tL~~~~l~~~~i~~~IA~~la~~H~~~~ 244 (317)
+.+.++++.+|+. |++|+++ ..-...||..|+++|...+
T Consensus 59 ~~~~~~~~~q~~~~~~~l~~~----~~~~~~ia~~L~~lH~~~~ 98 (269)
T COG0510 59 IANGGVLVAQYWENGRTLTPE----DMNLKKIAHILKKLHNSVP 98 (269)
T ss_pred cccCCceEEeeeccccccCcc----ccchHHHHHHHHHhcCccc
Confidence 5677899999888 5788888 5567779999999999654
No 475
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=67.84 E-value=6.5 Score=37.02 Aligned_cols=47 Identities=17% Similarity=0.208 Sum_probs=32.6
Q ss_pred CceEEEecCceEEEeecCccCCCCCC-------------CCcccHHHHHHHHHhhcccCC
Q psy8745 198 PRLYAEFDNGLVYQYVRGVTITPDSI-------------REPHIHPLVARNMARLHKVHS 244 (317)
Q Consensus 198 p~l~g~F~nG~~e~fi~g~tL~~~~l-------------~~~~i~~~IA~~la~~H~~~~ 244 (317)
|++++.-++..+|++|+|.++..-+. ..+.+...+|+-|+++|.+..
T Consensus 71 P~~~~~~~~~~~y~~i~G~p~~~~~~~~~~~~~~~~~~~~~~~la~~la~~La~LH~i~~ 130 (276)
T cd05152 71 PDWRVHTPELIAYPKLPGVPAATIDPEIGEYVWNFDHKNPPEVFIESLAKALAELHSIPQ 130 (276)
T ss_pred CceeeecCceEEEeccCCCcccccCcccccceecccCCCcCHHHHHHHHHHHHHHhCCCh
Confidence 44444445567899999997753222 123477889999999999865
No 476
>KOG0671|consensus
Probab=67.77 E-value=9.4 Score=38.15 Aligned_cols=33 Identities=24% Similarity=0.415 Sum_probs=24.5
Q ss_pred CeeeeecCCCCCCeeeeCC-------------------CCeEEEEeeccccC
Q psy8745 43 PVVFCHNDLLLGNIIYDET-------------------EDKVTFIDYEYAGV 75 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~-------------------~~~l~lIDfEya~~ 75 (317)
...+.|=||+|.|||+-++ .-.|.+|||--|.+
T Consensus 210 ~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf 261 (415)
T KOG0671|consen 210 DLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATF 261 (415)
T ss_pred hcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcce
Confidence 4789999999999997321 12478999866654
No 477
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=67.66 E-value=6.2 Score=36.64 Aligned_cols=39 Identities=13% Similarity=0.256 Sum_probs=29.4
Q ss_pred CceEEEeecCccCCCCCCCCcccHHHHHHHHHhhcccCC
Q psy8745 206 NGLVYQYVRGVTITPDSIREPHIHPLVARNMARLHKVHS 244 (317)
Q Consensus 206 nG~~e~fi~g~tL~~~~l~~~~i~~~IA~~la~~H~~~~ 244 (317)
..++.||++|.+|..-.-.+..+...|+..|+++|....
T Consensus 118 ~~lvmEyi~G~tL~~~~~~~~~~~~~i~~~l~~lH~~gi 156 (232)
T PRK10359 118 YIMLIEYIEGVELNDMPEISEDVKAKIKASIESLHQHGM 156 (232)
T ss_pred eEEEEEEECCccHHHhhhccHHHHHHHHHHHHHHHHcCC
Confidence 346999999998855433345667799999999998654
No 478
>KOG4236|consensus
Probab=67.59 E-value=3.4 Score=43.14 Aligned_cols=32 Identities=22% Similarity=0.407 Sum_probs=26.4
Q ss_pred eeeeecCCCCCCeeeeCCC--CeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETE--DKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~--~~l~lIDfEya~~ 75 (317)
.-+.|+||+|.|+|+.+.. -++.|-||-||..
T Consensus 683 knIvHCDLKPENVLLas~~~FPQvKlCDFGfARi 716 (888)
T KOG4236|consen 683 KNIVHCDLKPENVLLASASPFPQVKLCDFGFARI 716 (888)
T ss_pred cceeeccCCchheeeccCCCCCceeeccccceee
Confidence 5689999999999996532 3799999999874
No 479
>cd05171 PIKKc_ATM Ataxia telangiectasia mutated (ATM), catalytic domain; The ATM catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATM is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATM contains a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. ATM is critical in the response to DNA double strand breaks (DSBs) caused by radiation. It is activated at the site of a DSB and phosphorylates key substrates that trigger pathways that regulate DNA repair and cell cycle checkpoints at the G1/S, S phase, and G2/M transi
Probab=67.50 E-value=5.1 Score=38.00 Aligned_cols=31 Identities=29% Similarity=0.332 Sum_probs=27.7
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccc
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYA 73 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya 73 (317)
..++.=+|-+++|||++...|.|+-|||.++
T Consensus 180 ~yilglgDRh~~NIll~~~tG~v~hiDf~~~ 210 (279)
T cd05171 180 GYILGLGDRHANNILIDEKTAEVVHIDLGIA 210 (279)
T ss_pred HHhhccCCCCcccEEEEcCcCcEEEEechhh
Confidence 4688889999999999876799999999886
No 480
>PRK10593 hypothetical protein; Provisional
Probab=67.30 E-value=6.5 Score=37.35 Aligned_cols=58 Identities=22% Similarity=0.512 Sum_probs=40.5
Q ss_pred CcchhhhhcC-C-CCceEEEec-------CceEEEeecCccCCCCCCCCc----ccHHHHHHHHHhhcccCC
Q psy8745 186 PSPQILHRAG-L-APRLYAEFD-------NGLVYQYVRGVTITPDSIREP----HIHPLVARNMARLHKVHS 244 (317)
Q Consensus 186 ~~~~~L~~~~-~-gp~l~g~F~-------nG~~e~fi~g~tL~~~~l~~~----~i~~~IA~~la~~H~~~~ 244 (317)
..+..|.+.+ + -|++|+... .+.|-|+|+|.++.... ..+ .+...+|+.||++|....
T Consensus 59 ~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~~~~~-~~~~~~~~l~~~l~~~La~LH~~~~ 129 (297)
T PRK10593 59 WKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSVEAPA-RTPERWEQLKDQIVEGLLAWHRIDS 129 (297)
T ss_pred HHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEecCCCC-CCHHHHHHHHHHHHHHHHHHhCCCh
Confidence 4456677764 3 899998653 46899999999887522 222 234456799999999764
No 481
>KOG1152|consensus
Probab=66.69 E-value=4.7 Score=42.46 Aligned_cols=33 Identities=27% Similarity=0.335 Sum_probs=29.0
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
....+.|+|++-.|+++++ +|-+.||||--|.|
T Consensus 687 h~~~ivhrdikdenvivd~-~g~~klidfgsaa~ 719 (772)
T KOG1152|consen 687 HDQGIVHRDIKDENVIVDS-NGFVKLIDFGSAAY 719 (772)
T ss_pred cccCceecccccccEEEec-CCeEEEeeccchhh
Confidence 5678999999999999987 68899999987765
No 482
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=66.38 E-value=6.9 Score=37.52 Aligned_cols=31 Identities=19% Similarity=0.242 Sum_probs=22.1
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccC
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGV 75 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~ 75 (317)
..++|+|+.+.|++++. +|.+.|=||..+-.
T Consensus 164 ~GlVHgdi~~~nfll~~-~G~v~Lg~F~~~~r 194 (288)
T PF14531_consen 164 YGLVHGDIKPENFLLDQ-DGGVFLGDFSSLVR 194 (288)
T ss_dssp TTEEEST-SGGGEEE-T-TS-EEE--GGGEEE
T ss_pred cceEecccceeeEEEcC-CCCEEEcChHHHee
Confidence 46999999999999987 68999999987653
No 483
>KOG0590|consensus
Probab=66.15 E-value=4.9 Score=42.31 Aligned_cols=39 Identities=26% Similarity=0.410 Sum_probs=32.3
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhh
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFD 81 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fD 81 (317)
...+++|+|+++.|+++.. .+.+.++||--+...--.++
T Consensus 437 h~~GiahrdlK~enll~~~-~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 437 HSMGLAHRDLKLENLLVTE-NGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred HhcCceeccCccccEEEec-CCceEEeecCcceeeccCcc
Confidence 4579999999999999986 57899999988886655554
No 484
>KOG0695|consensus
Probab=64.59 E-value=5.8 Score=39.33 Aligned_cols=79 Identities=22% Similarity=0.280 Sum_probs=60.9
Q ss_pred cccchhhcchhhhhcCCCCHHH-HHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhH
Q psy8745 4 QSGAGLMFSSRFQALFPGGVSQ-LQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDI 82 (317)
Q Consensus 4 ~~~~~~~~~~~~~~~~p~~~~~-L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDi 82 (317)
+-|--+||+-+-+..+|..-+. ...|+.....+|.. -.+.-+||+-.|+|++. +|.+.|-||-.|.-|-.-=|.
T Consensus 333 v~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~----rgiiyrdlkldnvllda-eghikltdygmcke~l~~gd~ 407 (593)
T KOG0695|consen 333 VNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHE----RGIIYRDLKLDNVLLDA-EGHIKLTDYGMCKEGLGPGDT 407 (593)
T ss_pred ecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhh----cCeeeeeccccceEEcc-CCceeecccchhhcCCCCCcc
Confidence 4577889987778888854333 34466555555544 46788999999999986 799999999999988888888
Q ss_pred HHHHH
Q psy8745 83 ANHFD 87 (317)
Q Consensus 83 An~~~ 87 (317)
...||
T Consensus 408 tstfc 412 (593)
T KOG0695|consen 408 TSTFC 412 (593)
T ss_pred ccccc
Confidence 88766
No 485
>KOG0193|consensus
Probab=64.58 E-value=5.6 Score=41.86 Aligned_cols=35 Identities=31% Similarity=0.310 Sum_probs=30.7
Q ss_pred eeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745 44 VVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA 79 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~ 79 (317)
.-+.|.||+.+||++.+ ++.|++=||-.++..-++
T Consensus 507 K~IIHrDLKSnNIFl~~-~~kVkIgDFGLatvk~~w 541 (678)
T KOG0193|consen 507 KNIIHRDLKSNNIFLHE-DLKVKIGDFGLATVKTRW 541 (678)
T ss_pred hhhhhhhccccceEEcc-CCcEEEecccceeeeeee
Confidence 57899999999999976 588999999999987766
No 486
>KOG0666|consensus
Probab=63.98 E-value=5 Score=39.42 Aligned_cols=31 Identities=26% Similarity=0.247 Sum_probs=23.8
Q ss_pred eeeeecCCCCCCeeeeCC---CCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDET---EDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~---~~~l~lIDfEya~ 74 (317)
.-+.|+||+|.|||+..+ .|.|.+=|+-+|.
T Consensus 151 NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR 184 (438)
T KOG0666|consen 151 NWVLHRDLKPANILVMGDGPERGRVKIADLGLAR 184 (438)
T ss_pred hheeeccCCcceEEEeccCCccCeeEeecccHHH
Confidence 456899999999998642 3678888877653
No 487
>KOG0694|consensus
Probab=63.09 E-value=4.9 Score=42.65 Aligned_cols=60 Identities=18% Similarity=0.141 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchhhhHHHHHH
Q psy8745 23 VSQLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQAFDIANHFD 87 (317)
Q Consensus 23 ~~~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~fDiAn~~~ 87 (317)
.-...+|+-.-..+|.. ..+.++||+-.|||+|. +|.+.|.||-.|.-+--.-|-+..||
T Consensus 470 arfyaAev~l~L~fLH~----~~IIYRDlKLdNiLLD~-eGh~kiADFGlcKe~m~~g~~TsTfC 529 (694)
T KOG0694|consen 470 ARFYAAEVVLGLQFLHE----NGIIYRDLKLDNLLLDT-EGHVKIADFGLCKEGMGQGDRTSTFC 529 (694)
T ss_pred HHHHHHHHHHHHHHHHh----cCceeeecchhheEEcc-cCcEEecccccccccCCCCCcccccc
Confidence 44455666655556654 57899999999999987 79999999999987766666666655
No 488
>cd05170 PIKKc_SMG1 Suppressor of morphogenetic effect on genitalia-1 (SMG-1), catalytic domain; The SMG-1 catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. SMG-1 is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). In addition to its catalytic domain, SMG-1 contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain at the C-terminus. SMG-1 plays a critical role in the mRNA surveillance mechanism known as non-sense mediated mRNA decay (NMD). NMD protects the cells from the accumulation of aberrant mRNAs with premature termination codons (PTCs) generated by geno
Probab=62.97 E-value=5.7 Score=38.25 Aligned_cols=31 Identities=29% Similarity=0.380 Sum_probs=27.4
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccc
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYA 73 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya 73 (317)
..|+.=+|-+++|||++...|+++-|||.++
T Consensus 208 ~yilglgDRh~~NIli~~~tG~v~hiDf~~~ 238 (307)
T cd05170 208 GYVIGLGDRHLDNVLIDLKTGEVVHIDYNVC 238 (307)
T ss_pred HHHccCCCCCCccEEEEcCCCcEEEEeeHhh
Confidence 4688889999999999976899999999875
No 489
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=61.62 E-value=16 Score=32.91 Aligned_cols=42 Identities=19% Similarity=0.214 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHhcCCCCeeeeecCCCCCCeeeeCC--CC-eEEEEee
Q psy8745 25 QLQSDWQYIETALSKTKSPVVFCHNDLLLGNIIYDET--ED-KVTFIDY 70 (317)
Q Consensus 25 ~L~~e~~~L~~~l~~~~~~~v~CHnDl~~~NiL~~~~--~~-~l~lIDf 70 (317)
.+.+.++.+.+.+- ..-++.+|+.++||++... +. ++++||-
T Consensus 122 ~~~~~L~~f~~~l~----~~~Iv~~dl~~~NIv~~~~~~~~~~lvlIDG 166 (199)
T PF10707_consen 122 ELRQALDEFKRYLL----DHHIVIRDLNPHNIVVQRRDSGEFRLVLIDG 166 (199)
T ss_pred HHHHHHHHHHHHHH----HcCCeecCCCcccEEEEecCCCceEEEEEeC
Confidence 34444444444442 2345566999999998532 23 6889997
No 490
>cd00892 PIKKc_ATR ATR (Ataxia telangiectasia and Rad3-related), catalytic domain; The ATR catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. ATR is also referred to as Mei-41 (Drosophila), Esr1/Mec1p (Saccharomyces cerevisiae), Rad3 (Schizosaccharomyces pombe), and FRAP-related protein (human). ATR is a member of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily. PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). ATR contains a UME domain of unknown function, a FAT (FRAP, ATM and TRRAP) domain, a catalytic domain, and a FATC domain at the C-terminus. Together with its downstream effector kinase, Chk1, ATR plays a central
Probab=61.54 E-value=6.9 Score=36.26 Aligned_cols=35 Identities=17% Similarity=0.221 Sum_probs=29.2
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
...++.=+|-+++|||++...|.+.-|||.++--+
T Consensus 137 ~~YilgigDRh~~NIli~~~tG~~~HIDfg~~~~~ 171 (237)
T cd00892 137 VGYILGLGDRHGENILFDSNTGDVVHVDFNCLFDK 171 (237)
T ss_pred HHHHhccCCCCcccEEEEcCCCcEEEEehHhhhcc
Confidence 35688889999999999976899999999776543
No 491
>smart00146 PI3Kc Phosphoinositide 3-kinase, catalytic domain. Phosphoinositide 3-kinase isoforms participate in a variety of processes, including cell motility, the Ras pathway, vesicle trafficking and secretion, and apoptosis. These homologues may be either lipid kinases and/or protein kinases: the former phosphorylate the 3-position in the inositol ring of inositol phospholipids. The ataxia telangiectesia-mutated gene produced, the targets of rapamycin (TOR) and the DNA-dependent kinase have not been found to possess lipid kinase activity. Some of this family possess PI-4 kinase activities.
Probab=61.51 E-value=6.6 Score=35.23 Aligned_cols=37 Identities=19% Similarity=0.187 Sum_probs=30.3
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCCchh
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVNYQA 79 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n~~~ 79 (317)
...++.=+|-+++|||++ +.|++.-|||.++--..+.
T Consensus 99 ~~YilglgDRh~~NIli~-~~G~v~hIDfg~~~~~~~~ 135 (202)
T smart00146 99 ITYILGLGDRHNDNIMLD-KTGHLFHIDFGFILGNGPK 135 (202)
T ss_pred HHHHhcCCCCCCCcEEEe-CCCCEEEEechhhhCcccc
Confidence 346778899999999999 5899999999887655543
No 492
>KOG0584|consensus
Probab=59.90 E-value=12 Score=39.58 Aligned_cols=52 Identities=21% Similarity=0.170 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHHHhc-CCCCeeeeecCCCCCCeeeeCCCCeEEEEeecccc
Q psy8745 23 VSQLQSDWQYIETALSK-TKSPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAG 74 (317)
Q Consensus 23 ~~~L~~e~~~L~~~l~~-~~~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~ 74 (317)
+-.++.+...|.+-|.- .....=+.|+||++.||.++++.|.|.+=|.-.|.
T Consensus 142 ~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAt 194 (632)
T KOG0584|consen 142 IKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLAT 194 (632)
T ss_pred HHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHH
Confidence 34555555444333321 11223458999999999999888999998876654
No 493
>cd05164 PIKKc Phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily, catalytic domain; The PIKK catalytic domain subfamily is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. Members include ATM (Ataxia telangiectasia mutated), ATR (Ataxia telangiectasia and Rad3-related), TOR (Target of rapamycin), SMG-1 (Suppressor of morphogenetic effect on genitalia-1), and DNA-PK (DNA-dependent protein kinase). PIKKs have intrinsic serine/threonine kinase activity and are distinguished from other PKs by their unique catalytic domain, similar to that of lipid PI3K, and their large molecular weight (240-470 kDa). They show strong preference for phosphorylating serine/threonine residues followed by a glutamine and are also referred to as (S/T)-Q-directed kinases. They all contain a FATC (FRAP, ATM and TRRAP, C-terminal) d
Probab=59.59 E-value=6.2 Score=36.15 Aligned_cols=35 Identities=23% Similarity=0.263 Sum_probs=29.2
Q ss_pred CCeeeeecCCCCCCeeeeCCCCeEEEEeeccccCC
Q psy8745 42 SPVVFCHNDLLLGNIIYDETEDKVTFIDYEYAGVN 76 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya~~n 76 (317)
...++.=+|-+++|||++...|.+.-|||.++--.
T Consensus 129 ~~YvlglgDRh~~NIli~~~tG~v~hIDf~~~~~~ 163 (222)
T cd05164 129 VGYILGLGDRHLDNILIDRETGEVVHIDFGCIFEK 163 (222)
T ss_pred HHHHhccCCCCCceEEEECCCCcEEEEccHHhhcc
Confidence 35688889999999999987899999999776433
No 494
>KOG1027|consensus
Probab=58.88 E-value=9.3 Score=41.63 Aligned_cols=31 Identities=19% Similarity=0.284 Sum_probs=24.4
Q ss_pred eeeeecCCCCCCeeeeCC----CCeEEEEeecccc
Q psy8745 44 VVFCHNDLLLGNIIYDET----EDKVTFIDYEYAG 74 (317)
Q Consensus 44 ~v~CHnDl~~~NiL~~~~----~~~l~lIDfEya~ 74 (317)
.-+.|+||+|.|||+... ..+..+=||..|-
T Consensus 625 l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 625 LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred cccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 788999999999999652 2356788987764
No 495
>PRK14705 glycogen branching enzyme; Provisional
Probab=58.41 E-value=19 Score=41.14 Aligned_cols=49 Identities=20% Similarity=0.330 Sum_probs=37.3
Q ss_pred CCeeeeecCCCCCCeeeeCC----CCeEEEEeecc---------ccCCchhhhHHHHHHHhh
Q psy8745 42 SPVVFCHNDLLLGNIIYDET----EDKVTFIDYEY---------AGVNYQAFDIANHFDEFA 90 (317)
Q Consensus 42 ~~~v~CHnDl~~~NiL~~~~----~~~l~lIDfEy---------a~~n~~~fDiAn~~~E~~ 90 (317)
.+..=||+|++-|.+|+..+ .+..+|||||= -....|.-|+|-.+..+-
T Consensus 329 ~~~~RIHGD~HLGQVL~t~~D~~~~~~~~IIDFEGEP~RpL~ERR~k~sPLRDVAGMLRSFd 390 (1224)
T PRK14705 329 GQLQRIHGDLHLGQILQVPGAEGQPERWAILDFEGEPLRPIDERNSPDVPLRDVTGMLRSFD 390 (1224)
T ss_pred cceEEEecccccccEEEecCCCCccCCEEEEecCCCCCCChhhhccCCChHHHHHHHHHHHH
Confidence 46677999999999999642 24599999985 234567888888887653
No 496
>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=58.20 E-value=8.2 Score=38.50 Aligned_cols=20 Identities=30% Similarity=0.268 Sum_probs=16.6
Q ss_pred CCCeeeeecCCCCCCeeeeC
Q psy8745 41 KSPVVFCHNDLLLGNIIYDE 60 (317)
Q Consensus 41 ~~~~v~CHnDl~~~NiL~~~ 60 (317)
+...-|.|+||+|+|||+-+
T Consensus 295 p~c~nF~H~DLKPdNILiFd 314 (434)
T PF05445_consen 295 PCCTNFLHVDLKPDNILIFD 314 (434)
T ss_pred CCcceeeecccCcCcEEEec
Confidence 44578999999999999754
No 497
>cd05163 TRRAP TRansformation/tRanscription domain-Associated Protein (TRRAP), pseudokinase domain; The TRRAP catalytic domain is part of a larger superfamily that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and RIO kinases. TRRAP shows some similarity to members of the phosphoinositide 3-kinase-related protein kinase (PIKK) subfamily in that it contains a FATC (FRAP, ATM and TRRAP, C-terminal) domain and has a large molecular weight. Unlike PIKK proteins, however, it contains an inactive PI3K-like pseudokinase domain, which lacks the conserved residues necessary for ATP binding and catalytic activity. TRRAP also contains many motifs that may be critical for protein-protein interactions. TRRAP is a common component of many histone acetyltransferase (HAT) complexes, and is responsible for the recruitment of these complexes to chromatin during transcription, replicat
Probab=57.50 E-value=10 Score=35.57 Aligned_cols=31 Identities=13% Similarity=0.050 Sum_probs=27.2
Q ss_pred CeeeeecCCCCCCeeeeCCCCeEEEEeeccc
Q psy8745 43 PVVFCHNDLLLGNIIYDETEDKVTFIDYEYA 73 (317)
Q Consensus 43 ~~v~CHnDl~~~NiL~~~~~~~l~lIDfEya 73 (317)
..++.=+|-+++||+++.+.|+|+-|||..+
T Consensus 153 gYilglgdRh~~nili~~~tG~v~hiDf~~~ 183 (253)
T cd05163 153 TYILSINNRNPDKIFISRDTGNVYQSDLLPS 183 (253)
T ss_pred HHHhcCCCCCchhEEEEcCCCcEEEEeeeee
Confidence 4678889999999999987899999999754
No 498
>PHA03111 Ser/Thr kinase; Provisional
Probab=57.45 E-value=17 Score=36.16 Aligned_cols=21 Identities=29% Similarity=0.233 Sum_probs=17.0
Q ss_pred CCCeeeeecCCCCCCeeeeCC
Q psy8745 41 KSPVVFCHNDLLLGNIIYDET 61 (317)
Q Consensus 41 ~~~~v~CHnDl~~~NiL~~~~ 61 (317)
+...-|.|+||+|+|||+-++
T Consensus 299 p~c~nF~H~DLKPdNILiFds 319 (444)
T PHA03111 299 PCCDNFLHVDLKPDNILIFDS 319 (444)
T ss_pred CCcceeeeccCCCCcEEEecC
Confidence 445789999999999998543
No 499
>smart00090 RIO RIO-like kinase.
Probab=56.59 E-value=18 Score=33.21 Aligned_cols=55 Identities=24% Similarity=0.309 Sum_probs=37.0
Q ss_pred hhhhhcCC-CCceEEEecCceEEEeecCccCCCCCCCCc--------ccHHHHHHHHHhhcccC
Q psy8745 189 QILHRAGL-APRLYAEFDNGLVYQYVRGVTITPDSIREP--------HIHPLVARNMARLHKVH 243 (317)
Q Consensus 189 ~~L~~~~~-gp~l~g~F~nG~~e~fi~g~tL~~~~l~~~--------~i~~~IA~~la~~H~~~ 243 (317)
..|...++ -|++++.-....|.||++|.+|....+.++ .+...|+..|+.+|...
T Consensus 105 ~~L~~~~i~~p~~~~~~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g 168 (237)
T smart00090 105 QRLYEAGVPVPKPIAWRRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEG 168 (237)
T ss_pred HHHHhcCCCCCeeeEecCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcC
Confidence 33444343 366666556789999999987754333322 57778888889999766
No 500
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=56.49 E-value=6.8 Score=35.51 Aligned_cols=39 Identities=18% Similarity=0.342 Sum_probs=28.8
Q ss_pred eeeeecCCCCC--CeeeeCCCCeEEEEeeccccCCchhhhHHH
Q psy8745 44 VVFCHNDLLLG--NIIYDETEDKVTFIDYEYAGVNYQAFDIAN 84 (317)
Q Consensus 44 ~v~CHnDl~~~--NiL~~~~~~~l~lIDfEya~~n~~~fDiAn 84 (317)
..+-|+.++-. |+++++ +++++||||-|.++...=-+..
T Consensus 124 ~GI~H~El~~~~k~vlv~~--~~~~iIDFd~At~k~~p~N~Tq 164 (201)
T COG2112 124 LGIEHGELSRPWKNVLVND--RDVYIIDFDSATFKKKPRNVTQ 164 (201)
T ss_pred hccchhhhcCCceeEEecC--CcEEEEEccchhhccCCchHHH
Confidence 57788888765 888853 5899999999996655444433
Done!