Query psy8747
Match_columns 214
No_of_seqs 141 out of 1049
Neff 4.7
Searched_HMMs 29240
Date Fri Aug 16 18:10:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8747.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8747hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yic_A 2-oxoglutarate decarbox 100.0 2.4E-47 8.1E-52 380.6 13.3 189 23-213 676-868 (868)
2 2xt6_A 2-oxoglutarate decarbox 100.0 9.8E-47 3.4E-51 383.8 13.2 200 5-213 910-1113(1113)
3 2jgd_A 2-oxoglutarate dehydrog 100.0 6.1E-46 2.1E-50 372.7 17.0 188 23-214 744-932 (933)
4 1qs0_B 2-oxoisovalerate dehydr 99.7 1.6E-17 5.5E-22 148.4 14.3 181 22-212 140-333 (338)
5 1ik6_A Pyruvate dehydrogenase; 99.7 5.8E-17 2E-21 147.7 12.8 148 23-188 188-340 (369)
6 1umd_B E1-beta, 2-OXO acid deh 99.7 5.1E-16 1.8E-20 137.9 12.7 173 23-211 141-318 (324)
7 2bfd_B 2-oxoisovalerate dehydr 99.6 9.2E-16 3.1E-20 137.9 12.5 171 23-211 158-336 (342)
8 2ozl_B PDHE1-B, pyruvate dehyd 99.6 1.7E-15 5.9E-20 136.4 11.2 154 23-192 152-315 (341)
9 1w85_B Pyruvate dehydrogenase 99.6 4.1E-15 1.4E-19 132.3 12.3 152 23-192 140-299 (324)
10 2o1s_A 1-deoxy-D-xylulose-5-ph 98.8 2.2E-08 7.4E-13 96.1 11.3 146 23-189 444-590 (621)
11 3mos_A Transketolase, TK; thia 98.5 2.7E-06 9.1E-11 82.1 15.2 156 23-198 439-597 (616)
12 1yd7_A 2-keto acid:ferredoxin 96.2 0.0013 4.4E-08 60.0 1.2 85 96-188 292-377 (395)
13 2o1x_A 1-deoxy-D-xylulose-5-ph 96.1 0.061 2.1E-06 51.6 12.5 146 23-189 447-593 (629)
14 3ju3_A Probable 2-oxoacid ferr 96.0 0.02 6.7E-07 43.8 7.1 85 97-189 15-104 (118)
15 2c42_A Pyruvate-ferredoxin oxi 93.0 0.21 7.2E-06 52.0 7.9 142 18-164 130-335 (1231)
16 3l84_A Transketolase; TKT, str 88.3 2.6 8.9E-05 40.8 10.2 122 23-164 466-592 (632)
17 2e6k_A Transketolase; structur 86.5 1.7 5.8E-05 41.9 7.7 127 23-167 481-614 (651)
18 1r9j_A Transketolase; domains, 82.8 3.8 0.00013 39.7 8.4 129 23-167 486-618 (673)
19 3m49_A Transketolase; alpha-be 72.2 10 0.00036 37.0 8.0 129 23-164 511-646 (690)
20 1itz_A Transketolase; calvin c 70.8 11 0.00039 36.3 7.9 128 23-165 499-633 (675)
21 1gpu_A Transketolase; transfer 68.1 29 0.00098 33.6 10.0 122 23-162 494-622 (680)
22 2r8o_A Transketolase 1, TK 1; 67.4 10 0.00035 36.6 6.7 126 23-165 486-620 (669)
23 3kom_A Transketolase; rossmann 60.6 26 0.0009 33.9 8.2 130 23-167 487-622 (663)
24 3ro2_B Peptide of nuclear mito 58.8 3.6 0.00012 24.4 1.1 15 154-168 9-23 (28)
25 3rim_A Transketolase, TK; TPP, 56.8 51 0.0017 32.3 9.5 133 23-164 516-654 (700)
26 3uk1_A Transketolase; structur 50.6 38 0.0013 33.2 7.5 129 23-164 532-666 (711)
27 1xrs_A D-lysine 5,6-aminomutas 31.0 31 0.0011 32.9 3.2 120 93-213 149-324 (516)
28 2ab1_A Hypothetical protein; H 28.6 9 0.00031 29.5 -0.7 58 50-118 24-89 (122)
29 3ly1_A Putative histidinol-pho 25.0 2.5E+02 0.0085 22.8 7.5 74 98-175 94-167 (354)
30 3bl9_A Scavenger mRNA-decappin 24.3 85 0.0029 27.9 4.7 62 66-146 4-65 (301)
31 2rmf_A Urocortin, HUCN1; CRF l 23.5 26 0.00089 22.5 0.9 7 36-42 10-16 (40)
32 2l27_B Peptide agonist; CRF, E 23.4 26 0.0009 22.3 0.9 7 36-42 8-14 (38)
33 2apj_A Putative esterase; AT4G 22.0 33 0.0011 29.2 1.5 16 91-106 16-31 (260)
34 3mpo_A Predicted hydrolase of 21.3 1.3E+02 0.0043 24.0 4.9 50 97-146 39-101 (279)
35 3nf5_A Nucleoporin NUP116; nuc 20.5 90 0.0031 25.4 3.8 69 99-171 70-155 (164)
36 3dao_A Putative phosphatse; st 20.0 1.4E+02 0.0047 24.2 4.9 56 98-155 57-127 (283)
No 1
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=2.4e-47 Score=380.62 Aligned_cols=189 Identities=32% Similarity=0.551 Sum_probs=171.9
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCcccccCCCCCceEcccCCCc--cccCcccccEEE
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSI--SERKADSVEKLV 100 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~l~ef~~g~~F~~vi~d~~~--~~~~~~~v~rvv 100 (214)
-||+|++||||+++||+||+|+.+++|+|+|||+||+|||++.++|+++||++| .|+++|++... ...+.++|+|+|
T Consensus 676 pnm~V~~Ps~p~~~~~lLr~a~~~~~~~Pvii~~pk~llR~~~~~~~~~~~~~~-~f~~~ig~~~~~~~l~~g~dv~r~I 754 (868)
T 2yic_A 676 GSMTIAMPSTPANYFHLLRRHGKDGIQRPLIVFTPKSMLRNKAAVSDIRDFTES-KFRSVLEEPMYTDGEGDRNKVTRLL 754 (868)
T ss_dssp TSCEEECCCSHHHHHHHHHHHHHSSCCCCEEEEECSGGGGCTTSCBCHHHHHSC-CCCSEECCHHHHTSSCCGGGCCEEE
T ss_pred CCCEEEEeCCHHHHHHHHHHHHhcCCCCcEEEEechHHhCCCCCCCCccccCCC-CceecCCcceeecccccCCceeEEE
Confidence 499999999999999999999999999999999999999999999999999765 59999987531 013568899999
Q ss_pred EecccchHHHHHHHHhcCCCCceEEEEeeccCCCcHHHHHHHHhcCCCC-cEEEeccCcCCCCcccchHHHHHhhhCC-C
Q psy8747 101 FCSGKVYYDLIKARNDNNLGDKIAVVRVEQISPFPFDLVKKECLRYPNA-KVQWVQEEHKNQGAWTYVQPRFNTTVNG-Q 178 (214)
Q Consensus 101 lCSGKvyydL~~~r~~~~~~~~vAIvRiEQLyPfP~~~l~~~l~~y~na-~~vW~QEEP~NmGAW~~v~~~l~~~~~~-~ 178 (214)
+|+||+||+|.+++++.|. .+++|||+|||||||.+.|.+.+++|+++ +++||||||.|+|+|++|.++|.+.+.. .
T Consensus 755 i~~G~~~~~l~aa~~~~g~-i~v~VIdl~~l~Pld~~~i~~~~~k~~~~~~vv~veE~~~~gG~g~~v~~~l~e~~~~l~ 833 (868)
T 2yic_A 755 LTSGKIYYELAARKAKENR-EDVAIVRIEQLAPLPRRRLAETLDRYPNVKEKFWVQEEPANQGAWPSFGLTLPEILPDHF 833 (868)
T ss_dssp EECSTHHHHHHHHHHHHTC-TTEEEEEECEEESCCHHHHHHHHHTCTTCCEEEEEEEEETTSTTHHHHHHHHHHHCHHHH
T ss_pred EEecHHHHHHHHHHHhCCC-CCEEEEEeeecCCCCHHHHHHHHHhcCCCceEEEEEeCCCCCCcHHHHHHHHHHHhhhcC
Confidence 9999999999999977773 47999999999999999999999999998 8999999999999999999999886531 2
Q ss_pred CceeEecCCCCCCCCCCCHHHHHHHHHHHHHHhhc
Q psy8747 179 RKMTYVGRPTAASPATGSKMQHVKELENLLADFMT 213 (214)
Q Consensus 179 ~~l~yvGRp~saspAtG~~~~H~~eq~~li~~Af~ 213 (214)
.+++|+|||.+++||+|+.+.|..||++||++||+
T Consensus 834 ~~v~~vg~~d~~~p~~g~~~~h~~~~~~~~~~a~~ 868 (868)
T 2yic_A 834 TGLKRISRRAMSAPSSGSSKVHAVEQQEILDTAFG 868 (868)
T ss_dssp TTCEEEEECCCSSSSCSCHHHHHHHHHHHHHHHTC
T ss_pred CCeEEeccCCcCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 46999999999999999999999999999999985
No 2
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=9.8e-47 Score=383.81 Aligned_cols=200 Identities=31% Similarity=0.535 Sum_probs=177.2
Q ss_pred cccccCCCCcccccccCCCCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCcccccCCCCCceEccc
Q psy8747 5 KAHRYPTMTLRDGAQRDKFPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIP 84 (214)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~l~ef~~g~~F~~vi~ 84 (214)
++++|++|+.. -||+|++||||++|||+||+|+.+++|+|+|||+||+|||||.++|+++||.+| .|+++|+
T Consensus 910 ~~E~~l~l~~~-------pnm~V~~Ps~~~~~~~lLr~a~~~~~~~Pvii~~pk~L~R~~~~~~~~~~~~~~-~f~~~ig 981 (1113)
T 2xt6_A 910 RIERFLQLWAE-------GSMTIAMPSTPANYFHLLRRHGKDGIQRPLIVFTPKSMLRNKAAVSDIRDFTES-KFRSVLE 981 (1113)
T ss_dssp CHHHHHHHCCT-------TSCEEECCSSHHHHHHHHHHHHHSSCCCCEEEEECSGGGSCSSSCBCHHHHHSC-CCCSEEC
T ss_pred cHHHHHhcCCC-------CCcEEEecCCHHHHHHHHHHHHhccCCCCEEEEechHHhCCCCCCCcccccCCC-CccccCC
Confidence 34555555543 499999999999999999999999999999999999999999999999999766 6999998
Q ss_pred CCCc--cccCcccccEEEEecccchHHHHHHHHhcCCCCceEEEEeeccCCCcHHHHHHHHhcCCCC-cEEEeccCcCCC
Q psy8747 85 DDSI--SERKADSVEKLVFCSGKVYYDLIKARNDNNLGDKIAVVRVEQISPFPFDLVKKECLRYPNA-KVQWVQEEHKNQ 161 (214)
Q Consensus 85 d~~~--~~~~~~~v~rvvlCSGKvyydL~~~r~~~~~~~~vAIvRiEQLyPfP~~~l~~~l~~y~na-~~vW~QEEP~Nm 161 (214)
+... ...+.++|+|+|+|+||+||+|.+++++.|. .+++|||+|||||||.+.|.+.+++|+++ +++||||||.|+
T Consensus 982 ~~~~~~~l~~g~dv~r~iv~~G~~~~~l~aa~~~~g~-i~v~VIdl~~l~Pld~~~i~~~~~k~~~~~~vv~veE~~~~g 1060 (1113)
T 2xt6_A 982 EPMYTDGEGDRNKVTRLLLTSGKIYYELAARKAKENR-EDVAIVRIEQLAPLPRRRLAETLDRYPNVKEKFWVQEEPANQ 1060 (1113)
T ss_dssp CHHHHTSCCCSTTCCEEEEECSTHHHHHHHHHHHHTC-TTEEEEEESEEESCCHHHHHHHHTTCTTCCEEEEEEEEETTS
T ss_pred cceeeccccCccccCEEEEEECHHHHHHHHHHHhCCC-CCEEEEEeeeecCCCHHHHHHHHHhCCCCceEEEEecCCCCC
Confidence 7431 0134678999999999999999999987773 47999999999999999999999999998 899999999999
Q ss_pred CcccchHHHHHhhhCC-CCceeEecCCCCCCCCCCCHHHHHHHHHHHHHHhhc
Q psy8747 162 GAWTYVQPRFNTTVNG-QRKMTYVGRPTAASPATGSKMQHVKELENLLADFMT 213 (214)
Q Consensus 162 GAW~~v~~~l~~~~~~-~~~l~yvGRp~saspAtG~~~~H~~eq~~li~~Af~ 213 (214)
|+|++|.++|.+.+.. ..+++|+|||.+++||+|+...|..||++||++||+
T Consensus 1061 G~gs~v~~~l~e~~~~l~~~~~~vg~~d~~~p~~g~~~~h~~~~~~~~~~a~~ 1113 (1113)
T 2xt6_A 1061 GAWPSFGLTLPEILPDHFTGLKRISRRAMSAPSSGSSKVHAVEQQEILDTAFG 1113 (1113)
T ss_dssp TTHHHHHHHHHHHSHHHHTTCEEEEECCCSSSSCSCHHHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHHHhhhcCCCeEEEccCCcCCCCCCCHHHHhHHHHHHHHHHhC
Confidence 9999999999886531 246999999999999999999999999999999985
No 3
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=6.1e-46 Score=372.72 Aligned_cols=188 Identities=39% Similarity=0.689 Sum_probs=173.0
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCcccccCCCCCceEcccCCCccccCcccccEEEEe
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVFC 102 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~l~ef~~g~~F~~vi~d~~~~~~~~~~v~rvvlC 102 (214)
-||+|++||||++|||+||+|+++++++|+|||+||+||||+.++|+++||.++ .|+.+|++... ...++|+|||+|
T Consensus 744 pnm~V~~Pst~~e~~~lLr~a~~~~~~~Pvii~~pk~l~r~~~~~~~~~~~~~~-~f~~~ig~~~~--~~g~dV~~vI~~ 820 (933)
T 2jgd_A 744 QNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANG-TFLPAIGEIDE--LDPKGVKRVVMC 820 (933)
T ss_dssp TCCEEECCCSHHHHHHHHHHHHHSSCCCCEEEEECSGGGGCTTCCBCHHHHHHC-CCCSEECCCSC--CCGGGCCEEEEE
T ss_pred CCeEEEecCCHHHHHHHHHHHHHhcCCCcEEEEecchhccCCCCcCCccccCCC-ceeecCCcceE--eecCcceEEEEE
Confidence 499999999999999999999999999999999999999999999999999655 59988987642 236789999999
Q ss_pred cccchHHHHHHHHhcCCCCceEEEEeeccCCCcHHHHHHHHhcCCCC-cEEEeccCcCCCCcccchHHHHHhhhCCCCce
Q psy8747 103 SGKVYYDLIKARNDNNLGDKIAVVRVEQISPFPFDLVKKECLRYPNA-KVQWVQEEHKNQGAWTYVQPRFNTTVNGQRKM 181 (214)
Q Consensus 103 SGKvyydL~~~r~~~~~~~~vAIvRiEQLyPfP~~~l~~~l~~y~na-~~vW~QEEP~NmGAW~~v~~~l~~~~~~~~~l 181 (214)
+|++||+|.++|++.+. ++++|||+|||||||.+.|.+.+++|+|+ +|+||||||.|+|+|++|.++|.+.+....++
T Consensus 821 ~G~v~~~l~aa~~~l~~-~~v~VIdl~~l~Pld~e~i~~~~~k~~~~~~vv~veE~~~~gG~g~~v~~~l~~~~~~~~~v 899 (933)
T 2jgd_A 821 SGKVYYDLLEQRRKNNQ-HDVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASL 899 (933)
T ss_dssp CTTHHHHHHHHHHHTTC-CSEEEEEECEEESCCHHHHHHHHGGGTTCCEEEEEEEEETTSTTHHHHHHHHHTTSCTTCEE
T ss_pred chHHHHHHHHHHHHccc-CCeEEEEeeccCCCCHHHHHHHHHhCCCCceEEEEecCCCcCCHHHHHHHHHHHhcccCCce
Confidence 99999999999988775 48999999999999999999999999999 89999999999999999999998865433579
Q ss_pred eEecCCCCCCCCCCCHHHHHHHHHHHHHHhhcC
Q psy8747 182 TYVGRPTAASPATGSKMQHVKELENLLADFMTL 214 (214)
Q Consensus 182 ~yvGRp~saspAtG~~~~H~~eq~~li~~Af~l 214 (214)
+|+|||.+++||+|+.+.|..||++||++||++
T Consensus 900 ~~vg~~d~~~pa~g~~~~h~~~~~~i~~~a~~~ 932 (933)
T 2jgd_A 900 RYAGRPASASPAVGHMSVHQKQQQDLVNDALNV 932 (933)
T ss_dssp EEEEECCCSSSSCSCHHHHHHHHHHHHHHHHCC
T ss_pred EEEecCCcCCCCcCCHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999974
No 4
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=99.74 E-value=1.6e-17 Score=148.37 Aligned_cols=181 Identities=12% Similarity=0.113 Sum_probs=133.7
Q ss_pred CC-CCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCC---CCcccccCC-------CCCceEcccCCCccc
Q psy8747 22 KF-PPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEA---KSSFDDMIE-------GTEFLRVIPDDSISE 90 (214)
Q Consensus 22 ~~-NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a---~S~l~ef~~-------g~~F~~vi~d~~~~~ 90 (214)
.+ ||.|+.|+||.+++|+||. +.+. +.|.+|+.||.|+|.+.. .++.+++.. .+.|...+++..
T Consensus 140 ~iP~l~V~~Psd~~e~~~~l~~-A~~~-~~Pv~i~~p~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~~--- 214 (338)
T 1qs0_B 140 QVCGLRTVMPSNPYDAKGLLIA-SIEC-DDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAA--- 214 (338)
T ss_dssp TSTTCEEECCCSHHHHHHHHHH-HHHS-SSCEEEEEEGGGSSSCCCSCSSSCCCCSTTSTTCEEESSCCCCCTTCCC---
T ss_pred cCCCCEEEeeCCHHHHHHHHHH-HHhc-CCcEEEEEchHhhcCcccccccCccchhhcccccccCCCCcccccCcee---
Confidence 44 9999999999999999998 5554 899999999999998765 444432211 112332222211
Q ss_pred cCcccccEEEEecccchHHHHHHHHhcCCCCceEEEEeeccCCCcHHHHHHHHhcCCCCcEEEeccCcCCCCcccchHHH
Q psy8747 91 RKADSVEKLVFCSGKVYYDLIKARNDNNLGDKIAVVRVEQISPFPFDLVKKECLRYPNAKVQWVQEEHKNQGAWTYVQPR 170 (214)
Q Consensus 91 ~~~~~v~rvvlCSGKvyydL~~~r~~~~~~~~vAIvRiEQLyPfP~~~l~~~l~~y~na~~vW~QEEP~NmGAW~~v~~~ 170 (214)
.-.+..+-+|+|+|..+++.++..++.|. ++.+|++..|+|||.+.|.+.++++. .++|++|...+.|-|++|...
T Consensus 215 ~~~~g~dv~iva~G~~~~~a~~Aa~~~Gi--~v~vi~~~~l~P~d~~~i~~~~~~~~--~vvvvEe~~~~gG~g~~V~~~ 290 (338)
T 1qs0_B 215 ITRPGNDVSVLTYGTTVYVAQVAAEESGV--DAEVIDLRSLWPLDLDTIVESVKKTG--RCVVVHEATRTCGFGAELVSL 290 (338)
T ss_dssp EEECCSSCEEEECTTHHHHHHHHHHHHCC--CCEEEECSEEESCCHHHHHHHHHHHS--CEEEEESSCSTTSTHHHHHHH
T ss_pred EecCCCCEEEEEeCHHHHHHHHHHHHcCC--CEEEEeecccCCCCHHHHHHHHhcCC--EEEEEecCCcCCcHHHHHHHH
Confidence 11123467999999999999998887553 69999999999999999999999986 589999887777766889888
Q ss_pred HHhhhCC--CCceeEecCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q psy8747 171 FNTTVNG--QRKMTYVGRPTAASPATGSKMQHVKELENLLADFM 212 (214)
Q Consensus 171 l~~~~~~--~~~l~yvGRp~saspAtG~~~~H~~eq~~li~~Af 212 (214)
+.+.... ..++.++|.|....|.. ..+.+.-..++|++.+.
T Consensus 291 l~~~~~~~l~~~v~~ig~~d~~~~~~-l~~~~g~~~~~I~~~i~ 333 (338)
T 1qs0_B 291 VQEHCFHHLEAPIERVTGWDTPYPHA-QEWAYFPGPSRVGAALK 333 (338)
T ss_dssp HHHHSSSSCCSCCEEEECCSSCCCST-THHHHSCCHHHHHHHHH
T ss_pred HHHhcccccCCCeEEEecCCcCCcHH-HHHHHCCCHHHHHHHHH
Confidence 8664211 13678899988776764 66666666677776654
No 5
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=99.71 E-value=5.8e-17 Score=147.69 Aligned_cols=148 Identities=20% Similarity=0.250 Sum_probs=111.7
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCcccc--cCCCCCceEcccCCCccccCcccccEEE
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDD--MIEGTEFLRVIPDDSISERKADSVEKLV 100 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~l~e--f~~g~~F~~vi~d~~~~~~~~~~v~rvv 100 (214)
-||.|+.|+||.+++|+||+.+ + +++|++|+.||.|+|++...-+-++ +.-| .++.+- + ..+.+|
T Consensus 188 Pnl~V~~Psd~~e~~~ll~~A~-~-~~~Pv~i~~p~~l~r~~~~~v~~~~~~~~~G-~~~v~~-~---------g~dv~I 254 (369)
T 1ik6_A 188 PGLVVVMPSTPYNAKGLLKAAI-R-GDDPVVFLEPKILYRAPREEVPEGDYVVEIG-KARVAR-E---------GDDVTL 254 (369)
T ss_dssp TTCEEECCCSHHHHHHHHHHHH-H-SSSCEEEEEEGGGSSCCCEEEECSSCCCCTT-CCEEEE-C---------CSSEEE
T ss_pred CCcEEEecCCHHHHHHHHHHHH-h-CCCCEEEEEehhhhccCCCCcCCCcccccCC-ceEEEE-c---------CCCEEE
Confidence 5999999999999999999965 4 8899999999999998421111112 2222 233332 1 234699
Q ss_pred EecccchHHHHHHHHhcCCCCceEEEEeeccCCCcHHHHHHHHhcCCCCcEEEeccCcCCCCcc-cchHHHHHhhhCC--
Q psy8747 101 FCSGKVYYDLIKARNDNNLGDKIAVVRVEQISPFPFDLVKKECLRYPNAKVQWVQEEHKNQGAW-TYVQPRFNTTVNG-- 177 (214)
Q Consensus 101 lCSGKvyydL~~~r~~~~~~~~vAIvRiEQLyPfP~~~l~~~l~~y~na~~vW~QEEP~NmGAW-~~v~~~l~~~~~~-- 177 (214)
+|+|..+++.++..++.. . ++.+|++..|+|||.+.|.+.++++. .++|+ ||+.++|+| +.|...+.+....
T Consensus 255 ia~G~~v~~a~~Aa~~L~-G-~v~Vi~~~~l~P~d~~~i~~~~~~~~--~vvvv-Ee~~~~GG~g~~v~~~l~~~~~~~l 329 (369)
T 1ik6_A 255 VTYGAVVHKALEAAERVK-A-SVEVVDLQTLNPLDFDTVLKSVSKTG--RLIIA-HDSPKTGGLGAEVRALVAEKALDRL 329 (369)
T ss_dssp EECTTHHHHHHHHHHTSS-S-CEEEEECCEEETTCHHHHHHHHHHHC--CEEEE-EEEESTTSHHHHHHHHHHHHSGGGC
T ss_pred EEeCHHHHHHHHHHHHhC-C-CeEEEeeeecCCCCHHHHHHHHhccC--eEEEE-ecCCcCCcHHHHHHHHHHhhCcccc
Confidence 999999999999998876 5 89999999999999999999999986 58999 999999999 6677777553210
Q ss_pred CCceeEecCCC
Q psy8747 178 QRKMTYVGRPT 188 (214)
Q Consensus 178 ~~~l~yvGRp~ 188 (214)
..++..+|-+.
T Consensus 330 ~~pv~~vg~~d 340 (369)
T 1ik6_A 330 TAPVIRLAGPD 340 (369)
T ss_dssp SSCCEEEEECC
T ss_pred CCCeEEEcCCC
Confidence 12455555433
No 6
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=99.66 E-value=5.1e-16 Score=137.88 Aligned_cols=173 Identities=15% Similarity=0.236 Sum_probs=125.3
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCcccccCCCCCceEcccCCCccccCcccccEEEEe
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVFC 102 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~l~ef~~g~~F~~vi~d~~~~~~~~~~v~rvvlC 102 (214)
-||.|+.|+||..++|+|+..+. ++.|.+|+.||.|.|++.. ++.+ +.|.-.++... .-.+..+.+|+|
T Consensus 141 P~~~V~~P~d~~e~~~~l~~a~~--~~~Pv~i~~p~~l~~~~~~-----~~~~-~~~~~~~Gk~~---~~~~g~dv~iva 209 (324)
T 1umd_B 141 AGLKVVAVSTPYDAKGLLKAAIR--DEDPVVFLEPKRLYRSVKE-----EVPE-EDYTLPIGKAA---LRREGKDLTLIC 209 (324)
T ss_dssp TTCEEEECCSHHHHHHHHHHHHH--CSSCEEEEEEGGGSSSCCE-----ECCS-SCCCCCTTCCE---EEECCSSEEEEE
T ss_pred CCCEEEEeCCHHHHHHHHHHHHh--cCCCEEEEechHhcCCCCC-----CcCC-CCccccCCcce---EEecCCCEEEEE
Confidence 49999999999999999999884 7899999999999987532 2211 12331222110 001235689999
Q ss_pred cccchHHHHHHHHhc---CCCCceEEEEeeccCCCcHHHHHHHHhcCCCCcEEEeccCcCCCCcccchHHHHHhhhCC--
Q psy8747 103 SGKVYYDLIKARNDN---NLGDKIAVVRVEQISPFPFDLVKKECLRYPNAKVQWVQEEHKNQGAWTYVQPRFNTTVNG-- 177 (214)
Q Consensus 103 SGKvyydL~~~r~~~---~~~~~vAIvRiEQLyPfP~~~l~~~l~~y~na~~vW~QEEP~NmGAW~~v~~~l~~~~~~-- 177 (214)
+|..+++.++..++. |+ ++.+|++..|+|||.+.|.+.++++. .++|++|.+.+.|.|++|...+.+....
T Consensus 210 ~G~~~~~a~~Aa~~L~~~Gi--~v~vi~~~~l~P~d~~~i~~~~~~~~--~vv~vEe~~~~gG~g~~v~~~l~~~~~~~l 285 (324)
T 1umd_B 210 YGTVMPEVLQAAAELAKAGV--SAEVLDLRTLMPWDYEAVMNSVAKTG--RVVLVSDAPRHASFVSEVAATIAEDLLDML 285 (324)
T ss_dssp CGGGHHHHHHHHHHHHHTTC--CEEEEECCEEETCCHHHHHHHHHHHS--CEEEEEEEESTTCHHHHHHHHHHHHHGGGC
T ss_pred ecHHHHHHHHHHHHHHhcCC--CEEEEEeceecCCCHHHHHHHHhcCC--eEEEEecCCcCCCHHHHHHHHHHHhCcccc
Confidence 999999998876553 53 69999999999999999999999986 6999999999999999999888664311
Q ss_pred CCceeEecCCCCCCCCCCCHHHHHHHHHHHHHHh
Q psy8747 178 QRKMTYVGRPTAASPATGSKMQHVKELENLLADF 211 (214)
Q Consensus 178 ~~~l~yvGRp~saspAtG~~~~H~~eq~~li~~A 211 (214)
..++..+|.|....|. |..+.+.-.-+.|++.+
T Consensus 286 ~~~v~~vg~~d~~~~~-~l~~~~g~~~~~I~~~i 318 (324)
T 1umd_B 286 LAPPIRVTGFDTPYPY-AQDKLYLPTVTRILNAA 318 (324)
T ss_dssp SSCCEEEEECSSCCCS-TTHHHHSCCHHHHHHHH
T ss_pred CCCeEEEeCCCCCCCH-HHHHHhCcCHHHHHHHH
Confidence 2457889987765554 33333322334444433
No 7
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=99.65 E-value=9.2e-16 Score=137.89 Aligned_cols=171 Identities=12% Similarity=0.100 Sum_probs=119.9
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCcccccC--CCCCceEcccCCCccccCcccccEEE
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMI--EGTEFLRVIPDDSISERKADSVEKLV 100 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~l~ef~--~g~~F~~vi~d~~~~~~~~~~v~rvv 100 (214)
-||.|+.|+||.++||+|+..+ +. ++|.+|++||.|+|.+....+.+++. -| ... ++.+ .-+-+|
T Consensus 158 P~l~V~~Psd~~e~~~~l~~a~-~~-~~Pv~i~~p~~l~r~~~~~~~~~~~~~~~G-~~~-v~~~---------g~dv~i 224 (342)
T 2bfd_B 158 PGIKVVIPRSPFQAKGLLLSCI-ED-KNPCIFFEPKILYRAAAEEVPIEPYNIPLS-QAE-VIQE---------GSDVTL 224 (342)
T ss_dssp TTCEEECCSSHHHHHHHHHHHH-HS-SSCEEEEEEGGGTTSCCEEEESSCCCCCSS-CCE-EEEC---------CSSEEE
T ss_pred CCcEEEeeCCHHHHHHHHHHHH-hc-CCcEEEEecchhcCCCCCCCCCcccceeCC-ceE-Eecc---------CCCEEE
Confidence 3999999999999999999865 43 89999999999999865443333321 11 121 2221 235699
Q ss_pred EecccchHHHHHHHHhc----CCCCceEEEEeeccCCCcHHHHHHHHhcCCCCcEEEeccCcCCCCcccchHHHHHhhhC
Q psy8747 101 FCSGKVYYDLIKARNDN----NLGDKIAVVRVEQISPFPFDLVKKECLRYPNAKVQWVQEEHKNQGAWTYVQPRFNTTVN 176 (214)
Q Consensus 101 lCSGKvyydL~~~r~~~----~~~~~vAIvRiEQLyPfP~~~l~~~l~~y~na~~vW~QEEP~NmGAW~~v~~~l~~~~~ 176 (214)
+|+|..+++.++..++. |+ ++.+|++.+|+|||.+.|.+.++++. .++|++|.+.+.|-+++|...+.+...
T Consensus 225 ia~G~~~~~a~~Aa~~L~~~~Gi--~v~vi~~~~l~P~d~~~i~~~~~~~~--~vv~vEe~~~~gg~g~~v~~~l~~~~~ 300 (342)
T 2bfd_B 225 VAWGTQVHVIREVASMAKEKLGV--SCEVIDLRTIIPWDVDTICKSVIKTG--RLLISHEAPLTGGFASEISSTVQEECF 300 (342)
T ss_dssp EECTTHHHHHHHHHHHHHHHHCC--CEEEEECCEEESCCHHHHHHHHHHHS--CEEEEEEEESTTCHHHHHHHHHHHHHG
T ss_pred EEECHHHHHHHHHHHHHHhhcCC--CEEEEeeeecCCCCHHHHHHHHhcCC--EEEEEEeCccCCcHHHHHHHHHHhhCc
Confidence 99999999999887654 54 69999999999999999999999986 589996665544444888888865421
Q ss_pred C--CCceeEecCCCCCCCCCCCHHHHHHHHHHHHHHh
Q psy8747 177 G--QRKMTYVGRPTAASPATGSKMQHVKELENLLADF 211 (214)
Q Consensus 177 ~--~~~l~yvGRp~saspAtG~~~~H~~eq~~li~~A 211 (214)
. ..++..+|.+....|.. ..+.+.-.-+.|++.+
T Consensus 301 ~~l~~~v~~vg~~d~~~~~~-l~~~~gl~~~~I~~~i 336 (342)
T 2bfd_B 301 LNLEAPISRVCGYDTPFPHI-FEPFYIPDKWKCYDAL 336 (342)
T ss_dssp GGCSSCCEEEEECSSCCCST-THHHHSCCHHHHHHHH
T ss_pred cccCCCeEEEecCCCCChHH-HHHHHCcCHHHHHHHH
Confidence 1 13577888877655532 3333322334444433
No 8
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=99.62 E-value=1.7e-15 Score=136.35 Aligned_cols=154 Identities=11% Similarity=0.070 Sum_probs=112.5
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCc-ccc--c--CCCCCceEcccCCCccccCccccc
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSS-FDD--M--IEGTEFLRVIPDDSISERKADSVE 97 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~-l~e--f--~~g~~F~~vi~d~~~~~~~~~~v~ 97 (214)
-||.|+.|+||.+++|+||+.+ +. ++|++|+.||.++|++..+|+ +.+ + .-| .+.. +.+ ..+
T Consensus 152 P~l~V~~Psd~~e~~~~l~~a~-~~-~~Pv~i~~~~~~~~~~~~v~p~~~~~~~~~~~G-k~~v-~~~---------g~d 218 (341)
T 2ozl_B 152 PGLKVVSPWNSEDAKGLIKSAI-RD-NNPVVVLENELMYGVPFEFPPEAQSKDFLIPIG-KAKI-ERQ---------GTH 218 (341)
T ss_dssp TTCEEECCCSHHHHHHHHHHHH-HS-SSCEEEEECHHHHTCEEECCHHHHSTTCCCCTT-CCEE-EEC---------CSS
T ss_pred CCCEEEEeCCHHHHHHHHHHHH-hc-CCCEEEEEChhhhcCCCCcCCccCCccccccCC-ceEE-ecc---------CCC
Confidence 4999999999999999999954 43 799999999999998765532 221 1 112 1221 221 235
Q ss_pred EEEEecccchHHHHHHHHhcC-CCCceEEEEeeccCCCcHHHHHHHHhcCCCCcEEEeccCcCCCCcc-cchHHHHHh-h
Q psy8747 98 KLVFCSGKVYYDLIKARNDNN-LGDKIAVVRVEQISPFPFDLVKKECLRYPNAKVQWVQEEHKNQGAW-TYVQPRFNT-T 174 (214)
Q Consensus 98 rvvlCSGKvyydL~~~r~~~~-~~~~vAIvRiEQLyPfP~~~l~~~l~~y~na~~vW~QEEP~NmGAW-~~v~~~l~~-~ 174 (214)
-+|+|+|..+++.++..++.+ ...++.+|++++|+|||.+.|.+.+++++ .++|++|... +|.| ++|...+.+ .
T Consensus 219 v~iia~Gs~~~~a~~Aa~~L~~~Gi~v~vv~~~~l~P~d~~~i~~~~~~~~--~vv~vEe~~~-~Gg~g~~v~~~l~~~~ 295 (341)
T 2ozl_B 219 ITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRTIRPMDMETIEASVMKTN--HLVTVEGGWP-QFGVGAEICARIMEGP 295 (341)
T ss_dssp EEEEECSTHHHHHHHHHHHHHTTTCCEEEEECCEEETCCHHHHHHHHHHHS--CEEEECSSCS-TTCHHHHHHHHHHHST
T ss_pred EEEEEeCHHHHHHHHHHHHHHhcCCCeEEEeeeeecCCCHHHHHHHHhcCC--eEEEEecCcc-cCcHHHHHHHHHHhhh
Confidence 799999999999998876431 11379999999999999999999999986 4889955544 5666 788888765 3
Q ss_pred hC--CCCceeEecCCCCCCC
Q psy8747 175 VN--GQRKMTYVGRPTAASP 192 (214)
Q Consensus 175 ~~--~~~~l~yvGRp~sasp 192 (214)
.. -..++..+|.|....|
T Consensus 296 ~~~~l~~~v~~ig~~d~~~~ 315 (341)
T 2ozl_B 296 AFNFLDAPAVRVTGADVPMP 315 (341)
T ss_dssp TGGGCSSCCEEECCCSSCCC
T ss_pred cccccCCCEEEEecCCcCCC
Confidence 21 0246888999876554
No 9
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=99.61 E-value=4.1e-15 Score=132.28 Aligned_cols=152 Identities=15% Similarity=0.151 Sum_probs=112.2
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCccccc--CCCCCceEcccCCCccccCcccccEEE
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDM--IEGTEFLRVIPDDSISERKADSVEKLV 100 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~l~ef--~~g~~F~~vi~d~~~~~~~~~~v~rvv 100 (214)
-||.|+.|+||..+||+|+.-+ + ++.|.+|+.||.|.|.+....+-+++ .-| .+..+- + .-+-+|
T Consensus 140 P~l~V~~Psd~~e~~~~l~~a~-~-~~~Pv~i~~p~~l~r~~~~~~~~~~~~~~~G-k~~~~~-~---------g~dv~i 206 (324)
T 1w85_B 140 PGLKVVIPSTPYDAKGLLISAI-R-DNDPVIFLEHLKLYRSFRQEVPEGEYTIPIG-KADIKR-E---------GKDITI 206 (324)
T ss_dssp TTCEEECCSSHHHHHHHHHHHH-H-SSSCEEEEEETTTSSSCCEECCSSCCCCCTT-CCEEEE-C---------CSSEEE
T ss_pred CCCEEEeeCCHHHHHHHHHHHH-H-cCCCEEEEechHhcCCCCCCCCCccccccCC-ceEEEe-c---------CCCEEE
Confidence 5999999999999999999855 3 78999999999999975432221222 112 232221 1 234689
Q ss_pred EecccchHHHHHHHHhc---CCCCceEEEEeeccCCCcHHHHHHHHhcCCCCcEEEeccCcCCCCcc-cchHHHHHhhhC
Q psy8747 101 FCSGKVYYDLIKARNDN---NLGDKIAVVRVEQISPFPFDLVKKECLRYPNAKVQWVQEEHKNQGAW-TYVQPRFNTTVN 176 (214)
Q Consensus 101 lCSGKvyydL~~~r~~~---~~~~~vAIvRiEQLyPfP~~~l~~~l~~y~na~~vW~QEEP~NmGAW-~~v~~~l~~~~~ 176 (214)
+|+|..++..++..++. |+ ++.+|++..|+|||.+.|.+.++++. .++|+ ||+.++|.| +.+...+.+...
T Consensus 207 va~G~~~~~a~~Aa~~L~~~Gi--~v~vi~~~~l~P~d~~~i~~~~~~~~--~vvvv-Ee~~~~Gg~g~~v~~~l~~~~~ 281 (324)
T 1w85_B 207 IAYGAMVHESLKAAAELEKEGI--SAEVVDLRTVQPLDIETIIGSVEKTG--RAIVV-QEAQRQAGIAANVVAEINERAI 281 (324)
T ss_dssp EECTTHHHHHHHHHHHHHHTTC--CEEEEECSEEESCCHHHHHHHHHHHS--CEEEE-EEEETTSSSHHHHHHHHHHHHG
T ss_pred EEecHHHHHHHHHHHHHHhcCC--CEEEEEeeeecCCCHHHHHHHHhhCC--cEEEE-eCCCcCChHHHHHHHHHHhhCc
Confidence 99999999988876543 53 69999999999999999999999986 48999 888888888 557777755421
Q ss_pred C--CCceeEecCCCCCCC
Q psy8747 177 G--QRKMTYVGRPTAASP 192 (214)
Q Consensus 177 ~--~~~l~yvGRp~sasp 192 (214)
. ..++..+|.|....|
T Consensus 282 ~~l~~~v~~vg~~d~~~~ 299 (324)
T 1w85_B 282 LSLEAPVLRVAAPDTVYP 299 (324)
T ss_dssp GGCSSCCEEEEECSSSSC
T ss_pred cccCCCeEEEecCCcCCC
Confidence 1 135788888765433
No 10
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=98.80 E-value=2.2e-08 Score=96.14 Aligned_cols=146 Identities=13% Similarity=0.061 Sum_probs=105.2
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCcccccCCCCCceEcccCCCccccCcccccEEEEe
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVFC 102 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~l~ef~~g~~F~~vi~d~~~~~~~~~~v~rvvlC 102 (214)
-||.|+.|+||...+++|+. +.+....|.+|+.||..+........ .+|..| .+..+ .+. -+-+|+|
T Consensus 444 P~l~v~~P~d~~e~~~~l~~-a~~~~~~Pv~i~~~r~~~~~~~~~~~-~~~~~G-~~~~~-~~g---------~dv~iva 510 (621)
T 2o1s_A 444 PEMVIMTPSDENECRQMLYT-GYHYNDGPSAVRYPRGNAVGVELTPL-EKLPIG-KGIVK-RRG---------EKLAILN 510 (621)
T ss_dssp TTCEEECCSSHHHHHHHHHH-HHHCCSSCEEEECCSSBCCCCCCCCC-CCCCTT-CCEEE-ECC---------SSEEEEE
T ss_pred CCCEEEecCCHHHHHHHHHH-HHHcCCCCEEEEeCCCCCCCCCCCcc-ccccCC-ceEEe-ecC---------CCEEEEE
Confidence 39999999999999999987 55555799999999998754221112 345434 34433 221 1358999
Q ss_pred cccchHHHHHHHHhcCCCCceEEEEeeccCCCcHHHHHHHHhcCCCCcEEEeccCcCCCCcccc-hHHHHHhhhCCCCce
Q psy8747 103 SGKVYYDLIKARNDNNLGDKIAVVRVEQISPFPFDLVKKECLRYPNAKVQWVQEEHKNQGAWTY-VQPRFNTTVNGQRKM 181 (214)
Q Consensus 103 SGKvyydL~~~r~~~~~~~~vAIvRiEQLyPfP~~~l~~~l~~y~na~~vW~QEEP~NmGAW~~-v~~~l~~~~~~~~~l 181 (214)
+|..++..++. +.|+ ++.+|++-.++|||.+.|.+.++++. .++|| ||...+|.|.- |...+.+-. -..++
T Consensus 511 ~G~~~~~a~~A--~~Gi--~v~Vi~~~~~~P~d~~~i~~~~~~~~--~vv~v-Ee~~~~gg~g~~v~~~l~~~~-~~~~v 582 (621)
T 2o1s_A 511 FGTLMPEAAKV--AESL--NATLVDMRFVKPLDEALILEMAASHE--ALVTV-EENAIMGGAGSGVNEVLMAHR-KPVPV 582 (621)
T ss_dssp ESTTHHHHHHH--HHHH--TCEEEECCEEESCCHHHHHHHHHHCS--EEEEE-EEEESTTSHHHHHHHHHHHTT-CCCCE
T ss_pred ecHHHHHHHHH--cCCC--CEEEEecCccCCCCHHHHHHHHccCC--eEEEE-ECCCCCCCHHHHHHHHHHhcC-CCCCe
Confidence 99999998888 4464 69999999999999999999999764 58888 88888888743 444443321 02457
Q ss_pred eEecCCCC
Q psy8747 182 TYVGRPTA 189 (214)
Q Consensus 182 ~yvGRp~s 189 (214)
..+|-|..
T Consensus 583 ~~ig~~d~ 590 (621)
T 2o1s_A 583 LNIGLPDF 590 (621)
T ss_dssp EEEEECSS
T ss_pred EEEecCCc
Confidence 77776553
No 11
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=98.47 E-value=2.7e-06 Score=82.10 Aligned_cols=156 Identities=12% Similarity=0.066 Sum_probs=112.7
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCcccccCCCCCceEcccCCCccccCcccccEEEEe
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVFC 102 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~l~ef~~g~~F~~vi~d~~~~~~~~~~v~rvvlC 102 (214)
-||.|+.|++|...+++|+..+. .+.|+++..|+.- .|....+-++|..|+ .. |+.+. ++.+-+|+|
T Consensus 439 P~l~V~~P~d~~e~~~~l~~a~~--~~gp~~ir~~r~~--~p~~~~~~~~~~~Gk-a~-vl~eg-------~d~dv~iva 505 (616)
T 3mos_A 439 PTSTVFYPSDGVATEKAVELAAN--TKGICFIRTSRPE--NAIIYNNNEDFQVGQ-AK-VVLKS-------KDDQVTVIG 505 (616)
T ss_dssp TTEEEECCCSHHHHHHHHHHHHT--CCSEEEEECCSSC--CBCCSCTTCCCCTTC-CE-EEECC-------SSEEEEEEC
T ss_pred CCCEEEecCCHHHHHHHHHHHHh--cCCCEEEEEeCCC--CCccCCCcccccCCe-EE-EEEeC-------CCCCEEEEE
Confidence 39999999999999999987663 4689888887652 232223334454442 33 34332 224578999
Q ss_pred cccchHHHHHHHHh---cCCCCceEEEEeeccCCCcHHHHHHHHhcCCCCcEEEeccCcCCCCcccchHHHHHhhhCCCC
Q psy8747 103 SGKVYYDLIKARND---NNLGDKIAVVRVEQISPFPFDLVKKECLRYPNAKVQWVQEEHKNQGAWTYVQPRFNTTVNGQR 179 (214)
Q Consensus 103 SGKvyydL~~~r~~---~~~~~~vAIvRiEQLyPfP~~~l~~~l~~y~na~~vW~QEEP~NmGAW~~v~~~l~~~~~~~~ 179 (214)
+|..++..++..++ .|+ ++.+|++-.|+|||.+.|.+.++++.+ .++.+.|...+-|-.+-|...+.+.. ..
T Consensus 506 ~G~~v~~al~Aa~~L~~~Gi--~v~Vidlr~l~PlD~e~i~~~~~~~~~-~vvvvEe~~~~GG~G~~v~~~l~~~~--~~ 580 (616)
T 3mos_A 506 AGVTLHEALAAAELLKKEKI--NIRVLDPFTIKPLDRKLILDSARATKG-RILTVEDHYYEGGIGEAVSSAVVGEP--GI 580 (616)
T ss_dssp CTHHHHHHHHHHHHHHTTTC--EEEEEECSEEESCCHHHHHHHHHHTTT-EEEEEEEEESTTSHHHHHHHHHTTCT--TC
T ss_pred eCHHHHHHHHHHHHHHhcCC--CEEEEEeCccCCCCHHHHHHHHHhcCC-EEEEEcCCCCCcCHHHHHHHHHHhcC--CC
Confidence 99999888876654 343 799999999999999999999998722 47888888888888888887776532 34
Q ss_pred ceeEecCCCCCCCCCCCHH
Q psy8747 180 KMTYVGRPTAASPATGSKM 198 (214)
Q Consensus 180 ~l~yvGRp~saspAtG~~~ 198 (214)
++..+|-|. -+-.|...
T Consensus 581 ~v~~~g~~~--f~~~g~~~ 597 (616)
T 3mos_A 581 TVTHLAVNR--VPRSGKPA 597 (616)
T ss_dssp EEEEEEECS--CCCCSCHH
T ss_pred CEEEEeCCC--CCCCCCHH
Confidence 688888883 55667654
No 12
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=96.16 E-value=0.0013 Score=59.97 Aligned_cols=85 Identities=22% Similarity=0.334 Sum_probs=0.0
Q ss_pred ccEEEEecccchHHHHHHHHhcCC-CCceEEEEeeccCCCcHHHHHHHHhcCCCCcEEEeccCcCCCCcccchHHHHHhh
Q psy8747 96 VEKLVFCSGKVYYDLIKARNDNNL-GDKIAVVRVEQISPFPFDLVKKECLRYPNAKVQWVQEEHKNQGAWTYVQPRFNTT 174 (214)
Q Consensus 96 v~rvvlCSGKvyydL~~~r~~~~~-~~~vAIvRiEQLyPfP~~~l~~~l~~y~na~~vW~QEEP~NmGAW~~v~~~l~~~ 174 (214)
-+-+|+++|..+...++..++.+. ..++.+|++=.++|||.+.|.+.++++..+ -+=||. .|. +...+...
T Consensus 292 ~dv~iva~G~~~~~~~eA~~~L~~~Gi~v~vi~~r~~~Pld~~~i~~~~~~~~~v---vvvEe~--~G~---l~~~v~~~ 363 (395)
T 1yd7_A 292 AEIGVVATGIVARSALRAVKMLREEGIKAGLLKIETIWPFDFELIERIAERVDKL---YVPEMN--LGQ---LYHLIKEG 363 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEECccHHHHHHHHHHHHHcCCceEEEEeCeecCCCHHHHHHHHhcCCEE---EEEeCC--chH---HHHHHHHH
Confidence 456899999999888877654321 126999999999999999999999877543 344553 343 33344443
Q ss_pred hCCCCceeEecCCC
Q psy8747 175 VNGQRKMTYVGRPT 188 (214)
Q Consensus 175 ~~~~~~l~yvGRp~ 188 (214)
+.....+.++||..
T Consensus 364 ~~~~~~~~~~gk~~ 377 (395)
T 1yd7_A 364 ANGKAEVKLISKIG 377 (395)
T ss_dssp --------------
T ss_pred hcCCCCeEEEeccC
Confidence 33222344555543
No 13
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=96.08 E-value=0.061 Score=51.62 Aligned_cols=146 Identities=15% Similarity=0.172 Sum_probs=97.0
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCcccccCCCCCceEcccCCCccccCcccccEEEEe
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVFC 102 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~l~ef~~g~~F~~vi~d~~~~~~~~~~v~rvvlC 102 (214)
-||.|+.|++|.....+|+.-+.. ..|.++..||..+.... .....++.-|. .. ++.+ .-+-+|++
T Consensus 447 P~l~v~~P~d~~e~~~~~~~a~~~--~~Pv~i~~~r~~~~~~~-~~~~~~~~~G~-~~-~~~~---------g~dv~iva 512 (629)
T 2o1x_A 447 PGVRIGLPKDAAELRGMLKYAQTH--DGPFAIRYPRGNTAQVP-AGTWPDLKWGE-WE-RLKG---------GDDVVILA 512 (629)
T ss_dssp TTCEEECCSSHHHHHHHHHHHHHS--SSCEEEECCSSBCCCCC-TTCCCCCCTTC-CE-EEEC---------CSSEEEEE
T ss_pred CCcEEEecCCHHHHHHHHHHHHhC--CCCEEEEecCCCCCCCc-ccccccccCCc-eE-EEee---------CCCEEEEE
Confidence 499999999999999999875544 69999999988653211 01122232221 22 2222 12367999
Q ss_pred cccchHHHHHHHHhcCCCCceEEEEeeccCCCcHHHHHHHHhcCCCCcEEEeccCcCCCCccc-chHHHHHhhhCCCCce
Q psy8747 103 SGKVYYDLIKARNDNNLGDKIAVVRVEQISPFPFDLVKKECLRYPNAKVQWVQEEHKNQGAWT-YVQPRFNTTVNGQRKM 181 (214)
Q Consensus 103 SGKvyydL~~~r~~~~~~~~vAIvRiEQLyPfP~~~l~~~l~~y~na~~vW~QEEP~NmGAW~-~v~~~l~~~~~~~~~l 181 (214)
+|-.....++..++.. ++.+|.+=-+.|||.+.|.+.++++. -+-+=||..-.|.|. .|...+.+-. -..++
T Consensus 513 ~G~~v~~a~~Aa~~L~---~~~Vi~~~~~~Pld~~~i~~~~~~~~---~vv~vEe~~~~gG~g~~v~~~l~~~~-~~~~v 585 (629)
T 2o1x_A 513 GGKALDYALKAAEDLP---GVGVVNARFVKPLDEEMLREVGGRAR---ALITVEDNTVVGGFGGAVLEALNSMN-LHPTV 585 (629)
T ss_dssp CHHHHHHHHHHHTTCT---TEEEEECCEEESCCHHHHHHHHHHCS---EEEEEEEEESSSSHHHHHHHHHHHTT-CCCEE
T ss_pred ecHHHHHHHHHHHHhc---CCEEEeeCCCCCCcHHHHHHHHhhCC---cEEEEecCCCCCCHHHHHHHHHHHhC-CCCCe
Confidence 9999888888776654 79999999999999999999998753 334456655556553 3444443321 02456
Q ss_pred eEecCCCC
Q psy8747 182 TYVGRPTA 189 (214)
Q Consensus 182 ~yvGRp~s 189 (214)
..+|-|..
T Consensus 586 ~~ig~~d~ 593 (629)
T 2o1x_A 586 RVLGIPDE 593 (629)
T ss_dssp EEEEECSS
T ss_pred EEEeeCCc
Confidence 77777653
No 14
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=96.01 E-value=0.02 Score=43.84 Aligned_cols=85 Identities=15% Similarity=0.167 Sum_probs=55.8
Q ss_pred cEEEEecccchHHHHHHHHh---cCCCCceEEEEeeccCCCcHHHHHHHHhcCCCCcEEEeccCcCCC-Cccc-chHHHH
Q psy8747 97 EKLVFCSGKVYYDLIKARND---NNLGDKIAVVRVEQISPFPFDLVKKECLRYPNAKVQWVQEEHKNQ-GAWT-YVQPRF 171 (214)
Q Consensus 97 ~rvvlCSGKvyydL~~~r~~---~~~~~~vAIvRiEQLyPfP~~~l~~~l~~y~na~~vW~QEEP~Nm-GAW~-~v~~~l 171 (214)
+-+|+|.|-.+....+..+. .|. ++.++++=.++|||.+.|.+.++++..+ -+=|| |. |... .++..+
T Consensus 15 dv~iv~~Gs~~~~a~eA~~~L~~~Gi--~v~vi~~r~~~P~d~~~l~~~~~~~~~v---vvvE~--~~~G~l~~~i~~~~ 87 (118)
T 3ju3_A 15 DITFVTWGSQKGPILDVIEDLKEEGI--SANLLYLKMFSPFPTEFVKNVLSSANLV---IDVES--NYTAQAAQMIKLYT 87 (118)
T ss_dssp SEEEEEEGGGHHHHHHHHHHHHHTTC--CEEEEEECSSCSCCHHHHHHHHTTCSCC---CCCCC--CCCCCHHHHHHHHH
T ss_pred CEEEEEECccHHHHHHHHHHHHHCCC--ceEEEEECeEecCCHHHHHHHHcCCCEE---EEEEC--CCCCcHHHHHHHHc
Confidence 47899999998887765443 353 7999999999999999999999877654 24466 44 5432 233222
Q ss_pred HhhhCCCCceeEecCCCC
Q psy8747 172 NTTVNGQRKMTYVGRPTA 189 (214)
Q Consensus 172 ~~~~~~~~~l~yvGRp~s 189 (214)
.. -....-..|-|||-+
T Consensus 88 ~~-~~~~~i~~~~G~~~~ 104 (118)
T 3ju3_A 88 GI-DIKNKILKYNGRHMT 104 (118)
T ss_dssp CC-CCCCCCCCBTTBCCC
T ss_pred CC-CceeEEeeeCCeeCC
Confidence 11 001223456677754
No 15
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=93.00 E-value=0.21 Score=51.98 Aligned_cols=142 Identities=13% Similarity=0.139 Sum_probs=88.7
Q ss_pred cccCCCCCEEEcCCChhhHHHHHHHh--hhcCCCCceEEeCCcccccCCCC---CCccc---ccCCC---CCce------
Q psy8747 18 AQRDKFPPVSVGTTTPANLFHILRRQ--IALPFRKPLVLMTPKSLLRHPEA---KSSFD---DMIEG---TEFL------ 80 (214)
Q Consensus 18 ~~~~~~NmqV~~pSTpAqyFHlLRRQ--~~r~~rKPLIv~tPKSLLR~~~a---~S~l~---ef~~g---~~F~------ 80 (214)
+..+...|.|..|+||..-|+++..= +.-.++.|.|+|+.+.++.|-.. .-+.+ +|.+. ..|+
T Consensus 130 ~~ar~~G~~vl~pss~QEa~dl~~~Af~lAek~~~PVi~~~Dg~~~sh~~~~vev~~~~~~~~~~~~~~~~~~~~~~~~p 209 (1231)
T 2c42_A 130 YAARQTGFAMLASSSVQEAHDMALVAHLAAIESNVPFMHFFDGFRTSHEIQKIEVLDYADMASLVNQKALAEFRAKSMNP 209 (1231)
T ss_dssp HTTTTSSCEEEECCSHHHHHHHHHHHHHHHHHHCCCEEEEEETTTTTTCEEEEECCCHHHHHHTSCHHHHHHHHHHSCCT
T ss_pred HHHhcCCcEEEECCCHHHHHHHHHHHHHHHHHcCCCEEEEecCcccccceeeeecCCHHHHHhhcChhhhhhccccccCC
Confidence 34455678999999999999988874 23468999999999988877311 11111 11000 0011
Q ss_pred --Ecc---------------------------------------cCC-C-ccccCcccccEEEEecccchHHHHHHHH--
Q psy8747 81 --RVI---------------------------------------PDD-S-ISERKADSVEKLVFCSGKVYYDLIKARN-- 115 (214)
Q Consensus 81 --~vi---------------------------------------~d~-~-~~~~~~~~v~rvvlCSGKvyydL~~~r~-- 115 (214)
++. .+. . .+....+..+.+|++.|-.+..+.+.-+
T Consensus 210 ~~p~~~g~a~~~~~~~~~~e~~~~~~~~~~~~v~~~~~k~~~~~g~~y~~~e~~g~~dAd~vIVa~Gs~~~~~~eAv~~L 289 (1231)
T 2c42_A 210 EHPHVRGTAQNPDIYFQGREAANPYYLKVPGIVAEYMQKVASLTGRSYKLFDYVGAPDAERVIVSMGSSCETIEEVINHL 289 (1231)
T ss_dssp TSCCEESCBCCTTTHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHSCCCCSEEEEECTTCSEEEEECSTHHHHHHHHHHHH
T ss_pred CCceecCCCcCcchhhhhHhhhhhhhHhhHHHHHHHHHHHHHHhcccccceeeecCCCCCEEEEEeCHHHHHHHHHHHHH
Confidence 000 000 0 0000123467899999999877755443
Q ss_pred -hcCCCCceEEEEeeccCCCcHHHHHHHH-hcCCCCcEEEeccCcCCCCcc
Q psy8747 116 -DNNLGDKIAVVRVEQISPFPFDLVKKEC-LRYPNAKVQWVQEEHKNQGAW 164 (214)
Q Consensus 116 -~~~~~~~vAIvRiEQLyPfP~~~l~~~l-~~y~na~~vW~QEEP~NmGAW 164 (214)
+.| .+|.+|+|=.++|||.+.|.+.| ++... |+ |=||-+..|+.
T Consensus 290 ~~~G--~kvgvl~lr~~rPfp~~~i~~~l~~~~k~--i~-VvE~~~~~g~~ 335 (1231)
T 2c42_A 290 AAKG--EKIGLIKVRLYRPFVSEAFFAALPASAKV--IT-VLDRTKEPGAP 335 (1231)
T ss_dssp HTTT--CCEEEEEESEEESCCHHHHHHTSCTTCCE--EE-EEESSCCTTCS
T ss_pred HhcC--CceEEEEEEEeCCCCHHHHHHHHHhcCCE--EE-EEECCCCCCCC
Confidence 334 36999999999999999998888 44332 33 33666777773
No 16
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=88.26 E-value=2.6 Score=40.77 Aligned_cols=122 Identities=11% Similarity=0.134 Sum_probs=79.9
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCcccccCCCCCceEcccCCCccccCcccccEEEEe
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVFC 102 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~l~ef~~g~~F~~vi~d~~~~~~~~~~v~rvvlC 102 (214)
-||.|+.|+++.....+|+.-+. ...|.++..|+.-+ .+.......++..|. .|+.+.. .-+-.|++
T Consensus 466 P~l~V~~P~d~~e~~~~l~~A~~--~~~Pv~ir~~r~~~-~~~~~~~~~~~~~g~---~vl~~~~-------g~dvtiia 532 (632)
T 3l84_A 466 PNFLTFRPADGVENVKAWQIALN--ADIPSAFVLSRQKL-KALNEPVFGDVKNGA---YLLKESK-------EAKFTLLA 532 (632)
T ss_dssp SSCEEECCSSHHHHHHHHHHHHH--CSSCEEEECCSSCB-CCCCCCSBCCGGGSS---EEEECCT-------TCSEEEEE
T ss_pred CCCEEEecCCHHHHHHHHHHHHh--CCCCEEEEEcCCCC-CCCcccccccccccc---EEEEecC-------CCCEEEEE
Confidence 39999999999999999987765 66899999987655 222111223343331 3444320 12357889
Q ss_pred cccchHHHHHHHH---hcCCCCceEEEEeeccCCCcHH--HHHHHHhcCCCCcEEEeccCcCCCCcc
Q psy8747 103 SGKVYYDLIKARN---DNNLGDKIAVVRVEQISPFPFD--LVKKECLRYPNAKVQWVQEEHKNQGAW 164 (214)
Q Consensus 103 SGKvyydL~~~r~---~~~~~~~vAIvRiEQLyPfP~~--~l~~~l~~y~na~~vW~QEEP~NmGAW 164 (214)
+|-....-++..+ +.|+ ++.+|-+=-+.||+.+ ++.+.+.+ + .+-+=||.--. .|
T Consensus 533 ~G~~v~~al~Aa~~L~~~Gi--~~~Vi~~~~i~PlD~~~~~~~~sv~~--~--~vv~vE~~~~~-g~ 592 (632)
T 3l84_A 533 SGSEVWLCLESANELEKQGF--ACNVVSMPCFELFEKQDKAYQERLLK--G--EVIGVEAAHSN-EL 592 (632)
T ss_dssp CGGGHHHHHHHHHHHHHTTC--CEEEEECSBHHHHHTSCHHHHHHHCC--S--EEEEECSSCCG-GG
T ss_pred echHHHHHHHHHHHHHhcCC--CeEEEecCcCCCcchhHHHHHHHhcC--C--CEEEEeCChhh-hH
Confidence 9998776665543 3464 6999999999999886 36666655 2 23455776444 45
No 17
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=86.46 E-value=1.7 Score=41.92 Aligned_cols=127 Identities=13% Similarity=0.105 Sum_probs=81.6
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCc-ccccCCCCCceEcccCCCccccCcccccEEEE
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSS-FDDMIEGTEFLRVIPDDSISERKADSVEKLVF 101 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~-l~ef~~g~~F~~vi~d~~~~~~~~~~v~rvvl 101 (214)
-||.|+.|+++.....+|+.= .+....|.+|..||..+- ....+ .+++..|. .++.+. ++-+-+|+
T Consensus 481 P~l~V~~Pad~~E~~~~l~~A-~~~~~~Pv~i~~~r~~~~--~~~~~~~~~~~~G~---~vl~~g-------~~~dv~iv 547 (651)
T 2e6k_A 481 PNLFVIRPADAYETFYAWLVA-LRRKEGPTALVLTRQAVP--LLSPEKARGLLRGG---YVLEDV-------EEPQGVLV 547 (651)
T ss_dssp TTCEEECCSSHHHHHHHHHHH-HHCCSSCEEEECCSSCBC--CCCHHHHGGGGGSS---EEEECC-------SSCSEEEE
T ss_pred CCcEEEecCCHHHHHHHHHHH-HHcCCCCEEEEEeCCCCC--CCCcchhhhhcCCC---EEEeeC-------CCCCEEEE
Confidence 399999999999999999864 444457999999987652 21111 12243332 344432 11346899
Q ss_pred ecccchHHHHHHHH---hcCCCCceEEEEeeccCCCcHHH---HHHHHhcCCCCcEEEeccCcCCCCcccch
Q psy8747 102 CSGKVYYDLIKARN---DNNLGDKIAVVRVEQISPFPFDL---VKKECLRYPNAKVQWVQEEHKNQGAWTYV 167 (214)
Q Consensus 102 CSGKvyydL~~~r~---~~~~~~~vAIvRiEQLyPfP~~~---l~~~l~~y~na~~vW~QEEP~NmGAW~~v 167 (214)
++|-.....++..+ +.|+ ++.+|.+=-+.||+.+. +.++++... .++ +-||.--.|...++
T Consensus 548 a~G~~v~~al~Aa~~L~~~Gi--~~~Vv~~~~~~p~d~~~~~~~~~v~~~~~--~vv-~vE~~~~~G~~~~v 614 (651)
T 2e6k_A 548 ATGSEVHLALRAQALLREKGV--RVRVVSLPSFELFAAQPEAYRKEVLPPGL--PVV-AVEAGASLGWERYA 614 (651)
T ss_dssp ECTTHHHHHHHHHHHHHHTTC--CEEEEECSCHHHHHTSCHHHHHHHSCTTS--CEE-EECSSCCTTGGGTC
T ss_pred EECHHHHHHHHHHHHHHhcCC--cEEEEecCcCCccccccHHHHHHHhCcCC--eEE-EEeCCccCchHHhC
Confidence 99998776665543 3464 69999999999999985 555544332 233 44776554533344
No 18
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=82.81 E-value=3.8 Score=39.70 Aligned_cols=129 Identities=12% Similarity=0.033 Sum_probs=84.0
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCc-ccccCCCCCceEcccCCCccccCcccccEEEE
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSS-FDDMIEGTEFLRVIPDDSISERKADSVEKLVF 101 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~-l~ef~~g~~F~~vi~d~~~~~~~~~~v~rvvl 101 (214)
-||.|+.|+++.....+|+.=+ +....|.+|..||.-+- ....+ .+.+.-|. .|+.+.+ +-+-+|+
T Consensus 486 P~l~V~~Pad~~e~~~~l~~a~-~~~~~Pv~i~~~r~~~~--~~~~~~~~~~~~Ga---~vl~~g~-------~~dv~li 552 (673)
T 1r9j_A 486 PNLQVIRPSDQTETSGAWAVAL-SSIHTPTVLCLSRQNTE--PQSGSSIEGVRHGA---YSVVDVP-------DLQLVIV 552 (673)
T ss_dssp TTCEEECCSSHHHHHHHHHHHH-HCTTCCEEEECCSSEEC--CCTTCCHHHHHTSC---EEEECCT-------TCSEEEE
T ss_pred CCCEEEeCCCHHHHHHHHHHHH-HhCCCeEEEEEcCCCCC--CCCCcccccccCCC---EEEeeCC-------CCCEEEE
Confidence 4899999999999999998644 44458999999987542 21111 11243332 3554421 1246899
Q ss_pred ecccchHHHHHHHHhcCCCCceEEEEeeccCCCcHHH---HHHHHhcCCCCcEEEeccCcCCCCcccch
Q psy8747 102 CSGKVYYDLIKARNDNNLGDKIAVVRVEQISPFPFDL---VKKECLRYPNAKVQWVQEEHKNQGAWTYV 167 (214)
Q Consensus 102 CSGKvyydL~~~r~~~~~~~~vAIvRiEQLyPfP~~~---l~~~l~~y~na~~vW~QEEP~NmGAW~~v 167 (214)
++|-....-++..+.....-++.+|.+=-+.||+.+. +.+.+.+.. .+| +-||..-.|...++
T Consensus 553 a~G~~v~~al~Aa~~L~~~i~~~Vv~~~sl~pld~~~~~~i~~~~~~~~--~vv-~vE~~~~~g~~~~v 618 (673)
T 1r9j_A 553 ASGSEVSLAVDAAKALSGELRVRVVSMPCQELFDAQPDTYRQAVLPAGV--PVV-SVEAYVSFGWEKYS 618 (673)
T ss_dssp ECGGGHHHHHHHHHHHTTTCCEEEEECSCHHHHHTSCHHHHHHHSCTTS--CEE-EECSSCCTTGGGTC
T ss_pred EechhHHHHHHHHHHHHhcCCEEEEeCCCCchhhcccHHHHHHHhccCC--eEE-EEeCCCccchHHhc
Confidence 9999888777766554211379999999999999875 666665552 344 44666555544444
No 19
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=72.18 E-value=10 Score=36.99 Aligned_cols=129 Identities=14% Similarity=0.241 Sum_probs=81.3
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCC--cccccCCCCCceEcccCCCccccCcccccEEE
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKS--SFDDMIEGTEFLRVIPDDSISERKADSVEKLV 100 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S--~l~ef~~g~~F~~vi~d~~~~~~~~~~v~rvv 100 (214)
-||.|+.|+++.....+|+.-+. ....|.+|..|+.-+-.-.-.+ ...++..|. .|+.+.. ..+-+-.|
T Consensus 511 Pnl~V~~Pad~~E~~~~l~~Ai~-~~~~Pv~ir~~R~~~p~~~~~~~~~~~~~~~G~---~vlr~g~-----~g~~dvti 581 (690)
T 3m49_A 511 PNVSVIRPADGNESVAAWRLALE-STNKPTALVLTRQDLPTLEGAKDDTYEKVAKGA---YVVSASK-----KETADVIL 581 (690)
T ss_dssp TTCEEECCSSHHHHHHHHHHHHH-CSSSCEEEECCSSEEECCHHHHTTHHHHHHTSC---EEEECCS-----SSSCSEEE
T ss_pred CCCEEEeeCCHHHHHHHHHHHHH-cCCCCEEEEeecccCCCCCccccccccccCCCe---EEEEecC-----CCCCCEEE
Confidence 39999999999999999986554 4456999998876442100000 012344442 3554421 01124678
Q ss_pred EecccchHHHHHHHH---hcCCCCceEEEEeeccCCCcH--HHHHHHHhcCCCCcEEEeccCcCCCCcc
Q psy8747 101 FCSGKVYYDLIKARN---DNNLGDKIAVVRVEQISPFPF--DLVKKECLRYPNAKVQWVQEEHKNQGAW 164 (214)
Q Consensus 101 lCSGKvyydL~~~r~---~~~~~~~vAIvRiEQLyPfP~--~~l~~~l~~y~na~~vW~QEEP~NmGAW 164 (214)
+++|-....-++..+ +.|+ ++.+|-+=-+.||.. +++.+.+.. .+...+-+-||.--.| |
T Consensus 582 ia~G~~v~~Al~Aa~~L~~~GI--~~~Vid~~~i~p~D~~d~~~~~~v~~-~~~~~~v~vEe~~~~G-~ 646 (690)
T 3m49_A 582 LATGSEVSLAVEAQKALAVDGV--DASVVSMPSMDRFEAQTAEYKESVLP-KAVTKRFAIEMGATFG-W 646 (690)
T ss_dssp EECTTHHHHHHHHHHHHHHTTC--CEEEEECSCHHHHHTSCHHHHHHHSC-TTCCCEEEECSSCCTT-T
T ss_pred EEechHHHHHHHHHHHHHhcCC--CeEEEecccCCcCccccHHHHHHHhh-ccCCeEEEEECCchhh-H
Confidence 999997776665543 3464 699999988889875 455555542 1234455778887777 5
No 20
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=70.79 E-value=11 Score=36.32 Aligned_cols=128 Identities=15% Similarity=0.153 Sum_probs=79.6
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCC-cccccCCCCCceEcccCCCccccCcccccEEEE
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKS-SFDDMIEGTEFLRVIPDDSISERKADSVEKLVF 101 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S-~l~ef~~g~~F~~vi~d~~~~~~~~~~v~rvvl 101 (214)
-||.|+.|+++.....+|+.= .+....|.++..||.-+ |.... ..+.+.-| . .|+.+.. ..++-+-+|+
T Consensus 499 P~l~V~~Pad~~e~~~~l~~a-~~~~~~Pv~i~~~r~~~--p~~~~~~~~~~~~G-a--~vl~~~~----~G~~~dv~iv 568 (675)
T 1itz_A 499 PNILMLRPADGNETAGAYKVA-VLNRKRPSILALSRQKL--PHLPGTSIEGVEKG-G--YTISDNS----TGNKPDLIVM 568 (675)
T ss_dssp SSCEEECCCSHHHHHHHHHHH-HHCTTSCEEEEECSSCB--CCCTTCCHHHHTTS-S--EEEEECC----STTCCSEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHH-HHhCCCcEEEEecCCCC--CCCCCccccccccC-C--EEEeccc----CCCCCCEEEE
Confidence 499999999999999999764 45446899999887643 21111 11234333 2 3443310 0001346899
Q ss_pred ecccchHHHHHHHH---hcCCCCceEEEEeeccCCCcHHH---HHHHHhcCCCCcEEEeccCcCCCCccc
Q psy8747 102 CSGKVYYDLIKARN---DNNLGDKIAVVRVEQISPFPFDL---VKKECLRYPNAKVQWVQEEHKNQGAWT 165 (214)
Q Consensus 102 CSGKvyydL~~~r~---~~~~~~~vAIvRiEQLyPfP~~~---l~~~l~~y~na~~vW~QEEP~NmGAW~ 165 (214)
++|-.....++..+ +.|+ ++.+|.+=-+.||+.+. +.++++.+ ...+-+-||..- |.|.
T Consensus 569 a~G~~v~~al~Aa~~L~~~Gi--~v~Vv~~~~~~pld~~~~~~~~~v~~~~--~~~vv~vE~~~~-~G~~ 633 (675)
T 1itz_A 569 GTGSELEIAAKAADELRKEGK--TVRVVSFVSWELFDEQSDEYKESVLPAA--VTARISIEAGST-LGWQ 633 (675)
T ss_dssp ECGGGHHHHHHHHHHHHHTTC--CEEEEECSCHHHHHTSCHHHHHHHSCTT--CCCEEEECSSCC-TTTH
T ss_pred EECHHHHHHHHHHHHHHhcCC--cEEEEEeccCcccccchHHHHHHHhccC--CceEEEEECCcc-ccHH
Confidence 99998877665543 3464 69999999999999875 55554433 232334466655 4453
No 21
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=68.10 E-value=29 Score=33.57 Aligned_cols=122 Identities=11% Similarity=0.061 Sum_probs=77.7
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCcccc-cCCCCCceEcccCCCccccCcccccEEEE
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSSFDD-MIEGTEFLRVIPDDSISERKADSVEKLVF 101 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~l~e-f~~g~~F~~vi~d~~~~~~~~~~v~rvvl 101 (214)
-||.|+.|+++.....+|+.=+ +....|.++..||.-+-. ...+-.+ +.-| . .|+.+.+ +-+-+|+
T Consensus 494 P~l~V~~Pad~~e~~~~l~~A~-~~~~~Pv~i~~~r~~~~~--~~~~~~~~~~~G-~--~vl~~g~-------~~dvtiv 560 (680)
T 1gpu_A 494 PNIQVWRPADGNEVSAAYKNSL-ESKHTPSIIALSRQNLPQ--LEGSSIESASKG-G--YVLQDVA-------NPDIILV 560 (680)
T ss_dssp SSCEEECCCSHHHHHHHHHHHH-HCSSCCEEEECCSSCBCC--CTTCCHHHHTTS-C--EEEECCS-------SCSEEEE
T ss_pred CCCEEEecCCHHHHHHHHHHHH-HhCCCcEEEEecCCCCCC--CCCcchhhccCC-C--EEEecCC-------CCCEEEE
Confidence 4999999999999999998644 444589999999864422 1111112 3223 2 3444421 1246899
Q ss_pred ecccchHHHHHHHHh---cCCCCceEEEEeeccCCCcHHH---HHHHHhcCCCCcEEEeccCcCCCC
Q psy8747 102 CSGKVYYDLIKARND---NNLGDKIAVVRVEQISPFPFDL---VKKECLRYPNAKVQWVQEEHKNQG 162 (214)
Q Consensus 102 CSGKvyydL~~~r~~---~~~~~~vAIvRiEQLyPfP~~~---l~~~l~~y~na~~vW~QEEP~NmG 162 (214)
++|-....-++..++ .|+ ++.+|.+=-|.||+.+. +.++++.. ... -+-||..-.|
T Consensus 561 a~G~~v~~al~Aa~~L~~~Gi--~~~Vvd~~~l~pld~~~~~~~~sv~~~~--~~~-v~vE~~~~~g 622 (680)
T 1gpu_A 561 ATGSEVSLSVEAAKTLAAKNI--KARVVSLPDFFTFDKQPLEYRLSVLPDN--VPI-MSVEVLATTC 622 (680)
T ss_dssp ECTHHHHHHHHHHHHHHTTTC--CEEEEECSCHHHHHHSCHHHHHHHSCSS--SCE-EEECSSCSTT
T ss_pred EEcHHHHHHHHHHHHHHhcCC--CEEEEEcCCCCcchhhhHHHHHHHhccC--Cce-EEEeCCcccc
Confidence 999987766655543 354 69999999999998774 44444332 234 3447765544
No 22
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=67.39 E-value=10 Score=36.60 Aligned_cols=126 Identities=12% Similarity=0.096 Sum_probs=80.4
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCCc---ccccCCCCCceEcccCCCccccCcccccEE
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKSS---FDDMIEGTEFLRVIPDDSISERKADSVEKL 99 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S~---l~ef~~g~~F~~vi~d~~~~~~~~~~v~rv 99 (214)
-||.|+.|+++.....+|+.=+ +....|.+|..||..+.. .... .+.+..|. .|+.+.. .+-+-+
T Consensus 486 P~l~V~~Pad~~E~~~~l~~a~-~~~~~Pv~i~~~r~~~~~--~~~~~~~~~~~~~G~---~vl~~~~------g~~dv~ 553 (669)
T 2r8o_A 486 PNMSTWRPCDQVESAVAWKYGV-ERQDGPTALILSRQNLAQ--QERTEEQLANIARGG---YVLKDCA------GQPELI 553 (669)
T ss_dssp TTCEEECCSSHHHHHHHHHHHH-HCSSSCEEEECCSSEECC--CCCCHHHHHHGGGSC---EEEECCS------SSCSEE
T ss_pred CCCEEEecCCHHHHHHHHHHHH-HhCCCcEEEEeCCCCCCC--CCCccchhhhccCCC---EEEeccC------CCCCEE
Confidence 3999999999999999997655 444589999999987632 1111 11233332 3444310 012468
Q ss_pred EEecccchHHHHHHHHh---cCCCCceEEEEeeccCCCcHHH---HHHHHhcCCCCcEEEeccCcCCCCccc
Q psy8747 100 VFCSGKVYYDLIKARND---NNLGDKIAVVRVEQISPFPFDL---VKKECLRYPNAKVQWVQEEHKNQGAWT 165 (214)
Q Consensus 100 vlCSGKvyydL~~~r~~---~~~~~~vAIvRiEQLyPfP~~~---l~~~l~~y~na~~vW~QEEP~NmGAW~ 165 (214)
|+++|-....-++..++ .|+ ++.+|.+=-+.||+.+. +.+.++.. ...+-+-||.-- |.|.
T Consensus 554 iva~G~~v~~al~Aa~~L~~~Gi--~~~Vv~~~~~~pld~~~~~~~~~v~~~~--~~~vv~vE~~~~-~g~~ 620 (669)
T 2r8o_A 554 FIATGSEVELAVAAYEKLTAEGV--KARVVSMPSTDAFDKQDAAYRESVLPKA--VTARVAVEAGIA-DYWY 620 (669)
T ss_dssp EEECGGGHHHHHHHHHHHHHHTC--CEEEEECSCHHHHHTSCHHHHHHHSCTT--CCCEEEEEEEEG-GGGH
T ss_pred EEEECHHHHHHHHHHHHHHhcCC--CeEEEEeccCCccccchHHHHHHhcccc--CceEEEEeCCch-hhHH
Confidence 99999988777665543 364 69999999999998774 55555443 222223366544 4463
No 23
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=60.60 E-value=26 Score=33.93 Aligned_cols=130 Identities=12% Similarity=0.148 Sum_probs=79.3
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCC-CcccccCCCCCceEcccCCCccccCcccccEEEE
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAK-SSFDDMIEGTEFLRVIPDDSISERKADSVEKLVF 101 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~-S~l~ef~~g~~F~~vi~d~~~~~~~~~~v~rvvl 101 (214)
-||.|+.|+++.....+|+.-+ +....|.++..|+.-+-.-.-. .....+..|. .++.+.+ .-+-+|+
T Consensus 487 Pnl~V~~Pad~~e~~~~l~~A~-~~~~~Pv~ir~~r~~~p~~~~~~~~~~~~~~G~---~vl~~~~-------g~dvtii 555 (663)
T 3kom_A 487 PNLSVWRPADTIETMIAWKEAV-KSKDTPSVMVLTRQNLMPVVQTQHQVANIARGG---YLVKDNP-------DAKLTIV 555 (663)
T ss_dssp TTCEEECCCSHHHHHHHHHHHH-HCSSCCEEEECCSSEECCCCCCHHHHHHHTTTC---EEEECCT-------TCSCEEE
T ss_pred CCcEEEeeCCHHHHHHHHHHHH-HhCCCCEEEEccCccCCCcCccccchhcccCce---EEEEecC-------CCCEEEE
Confidence 3999999999999999998665 4456899998887533110000 0112343332 3444321 1235789
Q ss_pred ecccchHHHHHHHH---hcCCCCceEEEEeeccCCCcHHH--HHHHHhcCCCCcEEEeccCcCCCCcccch
Q psy8747 102 CSGKVYYDLIKARN---DNNLGDKIAVVRVEQISPFPFDL--VKKECLRYPNAKVQWVQEEHKNQGAWTYV 167 (214)
Q Consensus 102 CSGKvyydL~~~r~---~~~~~~~vAIvRiEQLyPfP~~~--l~~~l~~y~na~~vW~QEEP~NmGAW~~v 167 (214)
++|-....-++..+ +.|+ ++.+|.+=-+.||+.+. +.+.+.+ ....+-+-|+.--+|-..|+
T Consensus 556 a~G~~v~~al~Aa~~L~~~Gi--~~~Vi~~~si~p~D~~~~~~~~~vl~--~~~~~v~vE~~~~~g~~~~~ 622 (663)
T 3kom_A 556 ATGSEVELAVKVANEFEKKGI--KLNVASIPCVEVFATQAHEYKKTVIK--DDIPAVFVEMAQPDMWYKYM 622 (663)
T ss_dssp ECTTHHHHHHHHHHHHHHTTC--CCEEEECSCHHHHHTSCHHHHHHHSC--TTSCEEEECSSCCGGGGGGC
T ss_pred EecHHHHHHHHHHHHHHhcCC--CeEEEEcCcCCcccccHHHHHHHhcC--CCCeEEEEecCCcccHHHHh
Confidence 99998776655443 3464 69999999999999876 4443432 23223355665555533343
No 24
>3ro2_B Peptide of nuclear mitotic apparatus protein 1; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Homo sapiens}
Probab=58.80 E-value=3.6 Score=24.37 Aligned_cols=15 Identities=20% Similarity=0.530 Sum_probs=13.4
Q ss_pred eccCcCCCCcccchH
Q psy8747 154 VQEEHKNQGAWTYVQ 168 (214)
Q Consensus 154 ~QEEP~NmGAW~~v~ 168 (214)
||+||+-+..|.-+.
T Consensus 9 cqdepeqlddw~ria 23 (28)
T 3ro2_B 9 CQDEPEQLDDWNRIA 23 (28)
T ss_dssp CCCCCCCCCCTTTGG
T ss_pred ccCCcccchhHHHHH
Confidence 999999999998764
No 25
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=56.83 E-value=51 Score=32.29 Aligned_cols=133 Identities=14% Similarity=0.117 Sum_probs=79.7
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCC-CceEEeCCcccccCCCCCCcccccCCCCCceEcccCCCccccCcccccEEEE
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFR-KPLVLMTPKSLLRHPEAKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVF 101 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~r-KPLIv~tPKSLLR~~~a~S~l~ef~~g~~F~~vi~d~~~~~~~~~~v~rvvl 101 (214)
-||.|+.|+++...-.+|+.-+..+-. .|.++..|+.-+-.-.. ++...+..|. .|+.+.+. .....+-+-.|+
T Consensus 516 Pnl~V~~Pad~~e~~~~l~~Ai~~~~~~~Pv~ir~~r~~~~~~~~-~~~~~~~~G~---~vlr~g~~-~~~~~~~dvtii 590 (700)
T 3rim_A 516 PRLSVVRPADANETAYAWRTILARRNGSGPVGLILTRQGVPVLDG-TDAEGVARGG---YVLSDAGG-LQPGEEPDVILI 590 (700)
T ss_dssp TTCEEECCSSHHHHHHHHHHHHTTTTCSSCEEEECCSSEECCCTT-CCHHHHHHSC---EEEECCSC-CCTTCCCSEEEE
T ss_pred CCCEEEeCCCHHHHHHHHHHHHHccCCCCCEEEEeccccCCCcCc-ccccccCCCc---EEEecCCc-cccCCCCCEEEE
Confidence 399999999999999999866544321 69999999875532111 1123344443 36655310 000012246889
Q ss_pred ecccchHHHHHHHHh---cCCCCceEEEEeeccCCCcHH--HHHHHHhcCCCCcEEEeccCcCCCCcc
Q psy8747 102 CSGKVYYDLIKARND---NNLGDKIAVVRVEQISPFPFD--LVKKECLRYPNAKVQWVQEEHKNQGAW 164 (214)
Q Consensus 102 CSGKvyydL~~~r~~---~~~~~~vAIvRiEQLyPfP~~--~l~~~l~~y~na~~vW~QEEP~NmGAW 164 (214)
++|-....-++..++ .|+ ++.+|-+=-+.||..+ ++.+.+.+- +...+-+=||.--.| |
T Consensus 591 a~G~~v~~al~Aa~~L~~~Gi--~~~VVd~~~i~p~D~~~~~~~~~v~~~-~~~~~vtvEe~~~~G-~ 654 (700)
T 3rim_A 591 ATGSEVQLAVAAQTLLADNDI--LARVVSMPCLEWFEAQPYEYRDAVLPP-TVSARVAVEAGVAQC-W 654 (700)
T ss_dssp ECGGGHHHHHHHHHHHHTTTC--CEEEEECSCHHHHHHSCHHHHHHHSCT-TCCCEEEECSSCSGG-G
T ss_pred EechHHHHHHHHHHHHHhcCC--CeEEEEeccccccCcccHHHHHHHhcc-cceEEEEEeCCCchh-H
Confidence 999987766665443 354 6888888777788763 455444331 133344566655555 6
No 26
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=50.60 E-value=38 Score=33.23 Aligned_cols=129 Identities=13% Similarity=0.099 Sum_probs=80.6
Q ss_pred CCCEEEcCCChhhHHHHHHHhhhcCCCCceEEeCCcccccCCCCCC-cccccCCCCCceEcccCCCccccCcccccEEEE
Q psy8747 23 FPPVSVGTTTPANLFHILRRQIALPFRKPLVLMTPKSLLRHPEAKS-SFDDMIEGTEFLRVIPDDSISERKADSVEKLVF 101 (214)
Q Consensus 23 ~NmqV~~pSTpAqyFHlLRRQ~~r~~rKPLIv~tPKSLLR~~~a~S-~l~ef~~g~~F~~vi~d~~~~~~~~~~v~rvvl 101 (214)
-||.|+.|+++...-.+|+.-+. ...|.++..|+.-+-...-.. ...++..|. .|+.+.. . ...+-+-.|+
T Consensus 532 Pnl~V~~Pad~~E~~~~l~~Ai~--~~~Pv~ir~~r~~~p~~~~~~~~~~~i~~G~---~vl~~~~--G-~~~~~dvtii 603 (711)
T 3uk1_A 532 PNLDVWRPADTVETAVAWTYAVA--HQHPSCLIFSRQNLAFNARTDAQLANVEKGG---YVLRDWD--E-EIVARKIILI 603 (711)
T ss_dssp TTCEEECCSSHHHHHHHHHHHHH--SSSCEEEECCSSEECCCCCCHHHHHHGGGSS---EEEECCC--S-SCCSEEEEEE
T ss_pred CCCEEEecCCHHHHHHHHHHHHh--cCCCEEEEeeCCCCCCCCCccccccccCCCe---EEEEecC--C-CCCCCCEEEE
Confidence 39999999999999999987665 568999988876543211100 113344442 2554410 0 0001235788
Q ss_pred ecccchHHHHHHHH---hcCCCCceEEEEeeccCCCcHHH--HHHHHhcCCCCcEEEeccCcCCCCcc
Q psy8747 102 CSGKVYYDLIKARN---DNNLGDKIAVVRVEQISPFPFDL--VKKECLRYPNAKVQWVQEEHKNQGAW 164 (214)
Q Consensus 102 CSGKvyydL~~~r~---~~~~~~~vAIvRiEQLyPfP~~~--l~~~l~~y~na~~vW~QEEP~NmGAW 164 (214)
++|-....-++..+ +.|+ ++.+|-+=-+.||..+. +.+.+.+- ...+-+-||..-.| |
T Consensus 604 a~G~~v~~al~Aa~~L~~~GI--~~~Vid~~si~plD~~~~~~~~sv~~~--~~~~V~vE~~~~~g-~ 666 (711)
T 3uk1_A 604 ATGSEVELAMKAVEPLAQQGI--AARVVSMPSSDVFDRQDAEYRERVLPH--GVRRVAIEAGVTDF-W 666 (711)
T ss_dssp ECTTHHHHHHHHHHHHHHTTE--EEEEEECSCHHHHHTSCHHHHHHHSCT--TSCEEEECSSCSGG-G
T ss_pred EecHHHHHHHHHHHHHHHcCC--CeEEEecCcCCccchhHHHHHHHhhcc--CCeEEEEeCCcccc-H
Confidence 89998776665543 3454 68999999999998764 44444332 22355778876665 6
No 27
>1xrs_A D-lysine 5,6-aminomutase alpha subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.1.19.4
Probab=30.95 E-value=31 Score=32.86 Aligned_cols=120 Identities=20% Similarity=0.311 Sum_probs=72.6
Q ss_pred cccccEEEEecccchHHHHHHHHh--cCCCCceEEEEee-----ccCCCc----------------------HHHHHHHH
Q psy8747 93 ADSVEKLVFCSGKVYYDLIKARND--NNLGDKIAVVRVE-----QISPFP----------------------FDLVKKEC 143 (214)
Q Consensus 93 ~~~v~rvvlCSGKvyydL~~~r~~--~~~~~~vAIvRiE-----QLyPfP----------------------~~~l~~~l 143 (214)
++-+..+++.||.+|=|+.+.|.. .|. |-||+||-= ..-|+- -|++.+++
T Consensus 149 ~~p~iy~ivAtG~i~eDi~qa~aAA~~GA-D~IaVIRttgQSllDyvp~GaT~eG~GGt~aTqenfR~mRkALD~v~~ev 227 (516)
T 1xrs_A 149 SGPLLYVIVATGNIYEDITQAVAAAKQGA-DVIAVIRTTGQSLLDYVPYGATTEGFGGTYATQENFRLMREALDKVGAEV 227 (516)
T ss_dssp SSCEEEEEECCSCHHHHHHHHHHHHHTTC-SEEEECCCTTGGGCSSCCCSCCSCCTTSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEecCchHHHHHHHHHHHHcCC-CEEEEecccchhhhcccCCCCCCCCcCCchhhHHHHHHHHHHHHHHHHHh
Confidence 567889999999999999999965 475 789999942 233443 36777888
Q ss_pred hcCCCC-cEE--EeccCcCCCCcc-----------------------cchHHHHHhhhCC-CCceeEecCCCCCCCCCCC
Q psy8747 144 LRYPNA-KVQ--WVQEEHKNQGAW-----------------------TYVQPRFNTTVNG-QRKMTYVGRPTAASPATGS 196 (214)
Q Consensus 144 ~~y~na-~~v--W~QEEP~NmGAW-----------------------~~v~~~l~~~~~~-~~~l~yvGRp~saspAtG~ 196 (214)
-+|-|. ..+ -|=-|=.=|||+ +||..++.+.+.. -.-+.--|-...-+||-++
T Consensus 228 gRyI~~~nY~SGlcmPEIA~m~A~E~ld~~lnD~~YgiLfRdINm~RtfvDq~~sr~i~a~AgiiintGedNyltTAdA~ 307 (516)
T 1xrs_A 228 GKYIRLCNYCSGLCMPEIAAMGAIERLDVMLNDALYGILFRDINMQRTMIDQNFSRIINGFAGVIINTGEDNYLTTADAF 307 (516)
T ss_dssp TSCCEEEEECCSTTHHHHHHHHHHHTCSEEECCSSHHHHHHCBCHHHHHHHHHHHHHHHHHTTCEEECCTHHHHSSSCTT
T ss_pred CCeeeeeccccccccHHHHHHHHHhhhhhhhhchhhchhccccchhhhHHHHHHHHHHHHhcCeeeecCchhhhhhHHHH
Confidence 888664 211 011111122222 2333333333210 0113334555555777888
Q ss_pred HHHHHHHHHHHHHHhhc
Q psy8747 197 KMQHVKELENLLADFMT 213 (214)
Q Consensus 197 ~~~H~~eq~~li~~Af~ 213 (214)
-..|..--+++|++.|+
T Consensus 308 e~a~tv~~sq~iNe~fa 324 (516)
T 1xrs_A 308 EEAHTVLASQFINEQFA 324 (516)
T ss_dssp TSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888888888887774
No 28
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=28.59 E-value=9 Score=29.46 Aligned_cols=58 Identities=12% Similarity=0.108 Sum_probs=34.8
Q ss_pred CceEEeCCcccccCC---CCCCcccccCCCCCceEcccCCCccccCcccccEEEEecccc-----hHHHHHHHHhcC
Q psy8747 50 KPLVLMTPKSLLRHP---EAKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVFCSGKV-----YYDLIKARNDNN 118 (214)
Q Consensus 50 KPLIv~tPKSLLR~~---~a~S~l~ef~~g~~F~~vi~d~~~~~~~~~~v~rvvlCSGKv-----yydL~~~r~~~~ 118 (214)
||+||+ |....--+ ..+++++|++.. .|..++.. +++-||+-||+- -=++.+.-++.|
T Consensus 24 ~siiv~-p~~~~~w~w~~~g~~~~~~l~~~-~l~~ll~~---------~~evliiGtG~~~~~~~~~~~~~~l~~~g 89 (122)
T 2ab1_A 24 KDCKVW-PGGSRTWDWRETGTEHSPGVQPA-DVKEVVEK---------GVQTLVIGRGMSEALKVPSSTVEYLKKHG 89 (122)
T ss_dssp SEEEEE-TTEEEEECHHHHTCCSSSCCCHH-HHHHHHTT---------CCSEEEEEECSSCCSCCCHHHHHHHHHTT
T ss_pred CCEEEE-CCccccCcccccCcCChhHCCHH-HHHHHhhC---------CCCEEEECCCCCCccCCCHHHHHHHHHcC
Confidence 388776 55542111 126788888764 58887653 366999999963 234444444444
No 29
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=24.97 E-value=2.5e+02 Score=22.85 Aligned_cols=74 Identities=14% Similarity=0.117 Sum_probs=43.6
Q ss_pred EEEEecccchHHHHHHHHhcCCCCceEEEEeeccCCCcHHHHHHHHhcCCCCcEEEeccCcCCCCcccchHHHHHhhh
Q psy8747 98 KLVFCSGKVYYDLIKARNDNNLGDKIAVVRVEQISPFPFDLVKKECLRYPNAKVQWVQEEHKNQGAWTYVQPRFNTTV 175 (214)
Q Consensus 98 rvvlCSGKvyydL~~~r~~~~~~~~vAIvRiEQLyPfP~~~l~~~l~~y~na~~vW~QEEP~NmGAW~~v~~~l~~~~ 175 (214)
+||+. .-.|......-+..|. ++..+.+..=+-+..++|.+.|.++++..++++ +.|.|...-.+-...+.++.
T Consensus 94 ~vl~~-~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~v~l-~~p~nptG~~~~~~~l~~l~ 167 (354)
T 3ly1_A 94 QLVIP-ELTYGDGEHFAKIAGM--KVTKVKMLDNWAFDIEGLKAAVAAYSGPSIVYL-VNPNNPTGTITPADVIEPWI 167 (354)
T ss_dssp EEEEE-SSSCTHHHHHHHHTTC--EEEEECCCTTSCCCHHHHHHHHHTCSSCEEEEE-ESSCTTTCCCCCHHHHHHHH
T ss_pred eEEEC-CCCchHHHHHHHHcCC--EEEEecCCCCCCCCHHHHHHHhccCCCCCEEEE-eCCCCCcCCCcCHHHHHHHH
Confidence 44433 3334444333333443 355555553355677888888887777788887 57888766665555555554
No 30
>3bl9_A Scavenger mRNA-decapping enzyme DCPS; ligand complex, cytoplasm, hydrolase, nonsense-mediated mRNA decay, nucleus, polymorphism, structural genomics; HET: DD2; 1.80A {Homo sapiens} SCOP: d.13.1.3 d.246.1.1 PDB: 3bl7_A* 3bla_A*
Probab=24.28 E-value=85 Score=27.90 Aligned_cols=62 Identities=23% Similarity=0.410 Sum_probs=37.8
Q ss_pred CCCcccccCCCCCceEcccCCCccccCcccccEEEEecccchHHHHHHHHhcCCCCceEEEEeeccCCCcHHHHHHHHhc
Q psy8747 66 AKSSFDDMIEGTEFLRVIPDDSISERKADSVEKLVFCSGKVYYDLIKARNDNNLGDKIAVVRVEQISPFPFDLVKKECLR 145 (214)
Q Consensus 66 a~S~l~ef~~g~~F~~vi~d~~~~~~~~~~v~rvvlCSGKvyydL~~~r~~~~~~~~vAIvRiEQLyPfP~~~l~~~l~~ 145 (214)
+.+.+.+| .|.+|+.++ .-.|.|.--|++= + ..+ .+ ..+-|||-+| =.|||.+.+.+.+..
T Consensus 4 ~~~~l~~F----~~~rvL~~d--------~~~k~i~llG~~~-~--~~~--~~-~~~~AIv~le-k~~f~~~~~~~~~~~ 64 (301)
T 3bl9_A 4 VRLPFSGF----RLQKVLRES--------ARDKIIFLHGKVN-E--ASG--DG-DGEDAVVILE-KTPFQVEQVAQLLTG 64 (301)
T ss_dssp --CCSSCC----EEEEEEEEE--------TTTTEEEEEEECC-C------------CEEEEEEE-ECCCCHHHHHHHHTS
T ss_pred hhhhhhcc----EEEEeccCC--------CCCceEEEEEEeC-C--ccc--cC-CCCCEEEEEE-cCCCChhHHHHHhcc
Confidence 33445555 699999764 2335666689981 0 000 01 1257999999 579999988777766
Q ss_pred C
Q psy8747 146 Y 146 (214)
Q Consensus 146 y 146 (214)
-
T Consensus 65 ~ 65 (301)
T 3bl9_A 65 S 65 (301)
T ss_dssp C
T ss_pred c
Confidence 3
No 31
>2rmf_A Urocortin, HUCN1; CRF ligand, sauvagine, astressin2B, urocortins, urotensins, CRF receptors, amidation, cleavage on PAIR of basic residues, hormone; NMR {Synthetic} SCOP: j.16.1.1
Probab=23.48 E-value=26 Score=22.51 Aligned_cols=7 Identities=57% Similarity=1.094 Sum_probs=5.5
Q ss_pred HHHHHHH
Q psy8747 36 LFHILRR 42 (214)
Q Consensus 36 yFHlLRR 42 (214)
-||+||.
T Consensus 10 TFHlLR~ 16 (40)
T 2rmf_A 10 TFHLLRT 16 (40)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4899985
No 32
>2l27_B Peptide agonist; CRF, ECD1, family B1, alpha helical CRF, membrane P peptide binding protein; NMR {Homo sapiens}
Probab=23.35 E-value=26 Score=22.25 Aligned_cols=7 Identities=43% Similarity=0.895 Sum_probs=5.6
Q ss_pred HHHHHHH
Q psy8747 36 LFHILRR 42 (214)
Q Consensus 36 yFHlLRR 42 (214)
-||+||.
T Consensus 8 TFhlLR~ 14 (38)
T 2l27_B 8 TFNLLRE 14 (38)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4999985
No 33
>2apj_A Putative esterase; AT4G34215, CAR esterase family 6, structural genomics, protein structure initiative, CESG; HET: SEB; 1.60A {Arabidopsis thaliana} SCOP: c.23.10.7
Probab=22.01 E-value=33 Score=29.25 Aligned_cols=16 Identities=13% Similarity=0.252 Sum_probs=12.1
Q ss_pred cCcccccEEEEecccc
Q psy8747 91 RKADSVEKLVFCSGKV 106 (214)
Q Consensus 91 ~~~~~v~rvvlCSGKv 106 (214)
..++++-.|.||+|+-
T Consensus 16 ~~~~~~~~V~L~~GQS 31 (260)
T 2apj_A 16 QSPIPPNQIFILSGQX 31 (260)
T ss_dssp -CCCCCSEEEEEEESH
T ss_pred ccCCCCCeEEEecCcH
Confidence 3456788999999973
No 34
>3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0
Probab=21.34 E-value=1.3e+02 Score=24.00 Aligned_cols=50 Identities=12% Similarity=0.159 Sum_probs=32.0
Q ss_pred cEEEEecccchHHHHHHHHhcCCCC--ce------EEEE-----eeccCCCcHHHHHHHHhcC
Q psy8747 97 EKLVFCSGKVYYDLIKARNDNNLGD--KI------AVVR-----VEQISPFPFDLVKKECLRY 146 (214)
Q Consensus 97 ~rvvlCSGKvyydL~~~r~~~~~~~--~v------AIvR-----iEQLyPfP~~~l~~~l~~y 146 (214)
-++++|||.-+.++....+..+... +. |++. +---.+++.+.+.+.++.+
T Consensus 39 ~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~~ 101 (279)
T 3mpo_A 39 IKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAWA 101 (279)
T ss_dssp CEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHHH
Confidence 3799999999999988887766421 01 1221 1123588888777766543
No 35
>3nf5_A Nucleoporin NUP116; nuclear pore complex, glebs domain, structural genom 2, protein structure initiative; 1.94A {Candida glabrata}
Probab=20.48 E-value=90 Score=25.37 Aligned_cols=69 Identities=12% Similarity=0.244 Sum_probs=41.7
Q ss_pred EEEeccc--chHHHHHH-HHhcCCCCceEEEEeeccCCCc--------------HHHHHHHHhcCCCCcEEEeccCcCCC
Q psy8747 99 LVFCSGK--VYYDLIKA-RNDNNLGDKIAVVRVEQISPFP--------------FDLVKKECLRYPNAKVQWVQEEHKNQ 161 (214)
Q Consensus 99 vvlCSGK--vyydL~~~-r~~~~~~~~vAIvRiEQLyPfP--------------~~~l~~~l~~y~na~~vW~QEEP~Nm 161 (214)
|+|..+. ||-|=... -.-.|+ +.=|.|.||..||.. .+...+.|++-++++|+ +=-..-
T Consensus 70 V~f~~k~v~VYpd~~~KPpvG~GL-NvpA~ITL~~~~P~dk~t~~pi~d~~~~~~~~~i~rLk~~~g~~Fv---sYd~~t 145 (164)
T 3nf5_A 70 VVFQPMSVLLYNNSTNVPEKGKGL-NVRARISCYNCYPLDKSTRKPIKDPNHRIMERYSEKLKKIPHTHFE---SYDPAS 145 (164)
T ss_dssp EEEETTEEEESTTCSCCCCTTSTT-CSCEEEEECSCCCBCTTTCCBCCCTTSTHHHHHHHHHHHCTTCEEE---EEETTT
T ss_pred EEEecCEEEEeCCcCCCCCCCCCc-CcCEEEEEeeeEcCCCCCCccccCcchHHHHHHHHHHhccCCCEEE---EEeCCC
Confidence 6676665 45442110 011255 457999999999965 34566667777778755 222346
Q ss_pred CcccchHHHH
Q psy8747 162 GAWTYVQPRF 171 (214)
Q Consensus 162 GAW~~v~~~l 171 (214)
|.|.|.-.++
T Consensus 146 G~W~F~V~H~ 155 (164)
T 3nf5_A 146 GTYCFTVDHA 155 (164)
T ss_dssp TEEEEEESST
T ss_pred cEEEEEEccc
Confidence 9999954443
No 36
>3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale}
Probab=20.02 E-value=1.4e+02 Score=24.23 Aligned_cols=56 Identities=20% Similarity=0.256 Sum_probs=35.0
Q ss_pred EEEEecccchHHHHHHHHhcCCCCceEEE-----------EeeccCCCcHHHHHHHHhc---C-CCCcEEEec
Q psy8747 98 KLVFCSGKVYYDLIKARNDNNLGDKIAVV-----------RVEQISPFPFDLVKKECLR---Y-PNAKVQWVQ 155 (214)
Q Consensus 98 rvvlCSGKvyydL~~~r~~~~~~~~vAIv-----------RiEQLyPfP~~~l~~~l~~---y-~na~~vW~Q 155 (214)
+|++|||.-+.++....++.+. +..+| ++---.|++.+.+.++++. + ++..+....
T Consensus 57 ~v~iaTGR~~~~~~~~~~~l~~--~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~ 127 (283)
T 3dao_A 57 IFVVCSGRQFSSEFKLFAPIKH--KLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDELPACDYFAAT 127 (283)
T ss_dssp EEEEECSSCHHHHHHHTGGGGG--GCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred EEEEEcCCCHHHHHHHHHHcCC--CcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhcCCceEEEEe
Confidence 7899999999999887766543 11111 1222368888877766543 3 566555444
Done!