Query psy8748
Match_columns 2004
No_of_seqs 1219 out of 3099
Neff 5.8
Searched_HMMs 46136
Date Fri Aug 16 18:13:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8748.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8748hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3613|consensus 100.0 3E-127 6E-132 1242.5 37.3 832 590-1479 700-1578(1749)
2 KOG0271|consensus 100.0 7.5E-42 1.6E-46 392.4 30.0 327 1550-1980 110-479 (480)
3 KOG0286|consensus 100.0 1.4E-40 2.9E-45 373.4 37.9 340 1640-1980 3-343 (343)
4 KOG0271|consensus 100.0 3.1E-38 6.8E-43 362.7 26.7 310 1683-2004 106-458 (480)
5 KOG0318|consensus 100.0 6.8E-35 1.5E-39 346.1 36.1 428 1553-2003 57-579 (603)
6 KOG0272|consensus 100.0 3.2E-35 7E-40 342.7 24.3 283 1689-1980 172-458 (459)
7 KOG0272|consensus 100.0 5.7E-33 1.2E-37 324.1 22.5 279 1556-1938 176-458 (459)
8 KOG0319|consensus 100.0 1.1E-31 2.3E-36 329.1 31.9 393 1553-2003 103-595 (775)
9 cd00200 WD40 WD40 domain, foun 100.0 1.7E-30 3.8E-35 293.2 38.8 287 1685-1980 2-289 (289)
10 KOG0273|consensus 100.0 7.8E-31 1.7E-35 309.1 34.5 280 1692-1982 235-523 (524)
11 KOG0291|consensus 100.0 2.7E-30 5.8E-35 316.2 36.4 302 1683-1993 298-623 (893)
12 KOG0291|consensus 100.0 7.9E-30 1.7E-34 312.0 40.4 300 1683-1984 136-510 (893)
13 KOG0315|consensus 100.0 7.5E-30 1.6E-34 281.9 30.8 289 1705-2003 11-306 (311)
14 KOG0319|consensus 100.0 2E-30 4.4E-35 317.9 28.1 298 1681-1983 312-620 (775)
15 KOG0279|consensus 100.0 1.7E-29 3.7E-34 283.4 32.2 290 1684-1983 7-314 (315)
16 KOG0295|consensus 100.0 3.2E-30 6.9E-35 296.9 26.9 293 1681-1981 97-405 (406)
17 KOG0296|consensus 100.0 5E-29 1.1E-33 287.4 35.2 329 1549-1982 58-398 (399)
18 KOG0279|consensus 100.0 6E-29 1.3E-33 279.0 32.4 290 1551-1940 11-313 (315)
19 KOG0265|consensus 100.0 2.8E-29 6E-34 283.9 28.8 289 1684-1980 39-336 (338)
20 KOG0315|consensus 100.0 8.8E-29 1.9E-33 273.5 31.9 260 1693-1961 41-309 (311)
21 KOG0306|consensus 100.0 1.6E-28 3.4E-33 300.6 36.3 288 1686-1984 367-666 (888)
22 cd00200 WD40 WD40 domain, foun 100.0 7E-28 1.5E-32 272.0 38.4 282 1553-1938 7-289 (289)
23 KOG0285|consensus 100.0 3.7E-29 8.1E-34 286.4 27.2 298 1676-1984 135-441 (460)
24 KOG0318|consensus 100.0 8.1E-28 1.8E-32 286.3 39.1 330 1554-1982 189-602 (603)
25 KOG0284|consensus 100.0 3.8E-30 8.3E-35 299.1 17.0 282 1691-1982 95-380 (464)
26 KOG0286|consensus 100.0 6.9E-28 1.5E-32 271.5 33.0 285 1549-1938 49-343 (343)
27 KOG0293|consensus 100.0 1.9E-28 4.1E-33 284.5 26.8 301 1676-1983 208-514 (519)
28 KOG0645|consensus 100.0 2.3E-27 4.9E-32 265.4 33.6 288 1683-1982 5-311 (312)
29 KOG0263|consensus 100.0 2.4E-28 5.1E-33 303.6 27.1 208 1684-1898 443-651 (707)
30 KOG0266|consensus 100.0 1.2E-27 2.6E-32 301.8 33.8 292 1685-1982 151-454 (456)
31 KOG0284|consensus 100.0 6.5E-29 1.4E-33 289.0 18.7 282 1554-1939 95-379 (464)
32 KOG0273|consensus 100.0 1.2E-27 2.6E-32 282.3 28.5 296 1684-1991 171-491 (524)
33 KOG0282|consensus 100.0 6.9E-29 1.5E-33 294.1 18.0 290 1683-1980 205-503 (503)
34 KOG0263|consensus 100.0 7.3E-28 1.6E-32 299.2 25.5 249 1733-1984 377-651 (707)
35 KOG0266|consensus 100.0 7E-27 1.5E-31 294.8 34.0 285 1554-1939 158-453 (456)
36 PLN00181 protein SPA1-RELATED; 100.0 2.8E-26 6.1E-31 307.6 41.9 240 1692-1939 532-792 (793)
37 PLN00181 protein SPA1-RELATED; 100.0 3.5E-26 7.6E-31 306.7 42.3 283 1687-1981 478-792 (793)
38 KOG0285|consensus 100.0 2.8E-27 6.2E-32 271.0 26.8 287 1549-1939 145-438 (460)
39 KOG0306|consensus 100.0 1E-26 2.2E-31 284.9 33.0 386 1556-2003 66-598 (888)
40 KOG0295|consensus 100.0 5.1E-27 1.1E-31 270.6 27.0 289 1547-1939 100-405 (406)
41 COG5221 DOP1 Dopey and related 100.0 9.8E-28 2.1E-32 298.1 21.6 484 874-1456 906-1461(1618)
42 KOG0276|consensus 100.0 1.9E-26 4.1E-31 277.8 31.7 280 1554-1936 12-295 (794)
43 KOG0276|consensus 100.0 1E-26 2.2E-31 280.1 28.1 286 1685-1978 6-295 (794)
44 KOG0316|consensus 100.0 1.7E-26 3.7E-31 253.6 27.5 291 1681-1982 6-299 (307)
45 KOG0265|consensus 100.0 2.2E-26 4.8E-31 260.4 29.1 290 1545-1938 37-336 (338)
46 KOG0645|consensus 100.0 1.2E-25 2.7E-30 251.6 34.1 289 1551-1940 10-311 (312)
47 KOG0281|consensus 99.9 8.4E-28 1.8E-32 273.7 15.6 246 1685-1945 230-482 (499)
48 KOG0293|consensus 99.9 6.7E-27 1.4E-31 271.7 22.8 290 1548-1940 217-513 (519)
49 KOG0296|consensus 99.9 5.6E-26 1.2E-30 262.3 30.3 308 1684-2003 56-374 (399)
50 KOG0292|consensus 99.9 8E-26 1.7E-30 279.4 28.9 290 1687-1984 4-323 (1202)
51 KOG0292|consensus 99.9 2.1E-25 4.5E-30 275.7 31.7 286 1555-1944 9-325 (1202)
52 KOG0281|consensus 99.9 6.2E-27 1.3E-31 266.6 15.2 275 1691-1986 196-481 (499)
53 KOG0282|consensus 99.9 1.5E-26 3.2E-31 274.5 18.5 285 1551-1938 210-503 (503)
54 KOG0275|consensus 99.9 3.1E-26 6.8E-31 258.5 17.1 283 1690-1980 211-507 (508)
55 KOG0283|consensus 99.9 2.1E-25 4.7E-30 279.6 26.1 211 1678-1939 355-575 (712)
56 KOG0278|consensus 99.9 8.2E-26 1.8E-30 249.7 19.5 289 1686-1986 8-301 (334)
57 KOG3613|consensus 99.9 2E-27 4.3E-32 312.8 7.5 201 26-247 848-1057(1749)
58 KOG0316|consensus 99.9 1.9E-24 4.1E-29 237.6 26.2 282 1552-1938 14-297 (307)
59 KOG0643|consensus 99.9 4.7E-24 1E-28 238.2 28.3 288 1686-1984 4-319 (327)
60 KOG0288|consensus 99.9 3.3E-25 7.1E-30 258.8 19.3 290 1680-1980 163-459 (459)
61 KOG0313|consensus 99.9 3.2E-24 7E-29 248.6 26.8 285 1690-1982 103-418 (423)
62 KOG1407|consensus 99.9 1E-23 2.2E-28 235.2 28.1 277 1686-1973 14-293 (313)
63 KOG0313|consensus 99.9 6E-24 1.3E-28 246.4 26.7 283 1554-1939 104-417 (423)
64 KOG0305|consensus 99.9 7.7E-24 1.7E-28 260.9 28.2 278 1695-1984 180-463 (484)
65 KOG1063|consensus 99.9 1.6E-23 3.4E-28 256.2 28.8 420 1551-1984 50-650 (764)
66 KOG0283|consensus 99.9 5.6E-24 1.2E-28 267.0 24.5 293 1686-1984 260-578 (712)
67 KOG0640|consensus 99.9 7.2E-24 1.6E-28 239.5 22.2 294 1685-1982 105-426 (430)
68 KOG0289|consensus 99.9 4.3E-23 9.3E-28 242.0 28.8 282 1693-1981 220-505 (506)
69 KOG1407|consensus 99.9 7.5E-23 1.6E-27 228.3 28.3 274 1553-1931 18-293 (313)
70 KOG0268|consensus 99.9 2.5E-24 5.4E-29 248.0 16.5 285 1685-1984 59-347 (433)
71 KOG0772|consensus 99.9 2.2E-23 4.8E-28 247.7 24.3 300 1681-1980 156-485 (641)
72 KOG1446|consensus 99.9 5E-22 1.1E-26 227.8 34.4 292 1682-1984 4-305 (311)
73 KOG0274|consensus 99.9 8.9E-23 1.9E-27 259.2 30.8 281 1691-1990 207-490 (537)
74 KOG0278|consensus 99.9 8.2E-24 1.8E-28 234.0 17.5 250 1685-1945 52-302 (334)
75 KOG0274|consensus 99.9 1.8E-22 4E-27 256.3 31.8 249 1688-1952 245-494 (537)
76 KOG1408|consensus 99.9 1.4E-22 3.1E-27 245.9 28.7 273 1706-1984 394-715 (1080)
77 KOG0640|consensus 99.9 2.7E-23 5.9E-28 234.9 20.5 307 1552-1939 109-425 (430)
78 KOG0973|consensus 99.9 1.3E-22 2.8E-27 259.8 29.1 294 1690-1986 11-359 (942)
79 PTZ00421 coronin; Provisional 99.9 7.7E-22 1.7E-26 249.9 36.0 299 1691-1993 19-341 (493)
80 KOG0310|consensus 99.9 1.1E-22 2.4E-27 242.4 26.0 280 1691-1982 25-309 (487)
81 KOG1408|consensus 99.9 1.9E-22 4.1E-27 244.8 28.4 303 1693-2003 261-689 (1080)
82 KOG0300|consensus 99.9 9.6E-23 2.1E-27 230.4 23.8 300 1680-1984 136-478 (481)
83 KOG0288|consensus 99.9 3.2E-23 6.9E-28 242.4 18.9 284 1551-1937 171-458 (459)
84 KOG0308|consensus 99.9 7.5E-23 1.6E-27 248.8 22.5 298 1685-1985 66-396 (735)
85 KOG0772|consensus 99.9 1.9E-22 4.1E-27 239.8 24.7 290 1554-1938 166-485 (641)
86 KOG0643|consensus 99.9 8.9E-22 1.9E-26 220.2 28.6 291 1553-1940 8-317 (327)
87 KOG1539|consensus 99.9 1.3E-21 2.9E-26 243.2 32.4 375 1558-1993 162-617 (910)
88 KOG0275|consensus 99.9 8.1E-23 1.8E-27 231.2 19.5 259 1733-1992 212-477 (508)
89 KOG0277|consensus 99.9 1.6E-22 3.6E-27 224.8 21.6 279 1696-1981 12-308 (311)
90 KOG0973|consensus 99.9 5.3E-22 1.1E-26 254.2 28.5 251 1684-1941 61-356 (942)
91 KOG2106|consensus 99.9 6.4E-21 1.4E-25 226.5 34.6 299 1691-2003 153-497 (626)
92 KOG0299|consensus 99.9 6.1E-22 1.3E-26 234.5 25.5 291 1552-1929 139-444 (479)
93 PTZ00420 coronin; Provisional 99.9 1E-20 2.2E-25 241.3 37.7 277 1710-1991 50-343 (568)
94 KOG0641|consensus 99.9 1E-20 2.2E-25 206.4 31.4 247 1688-1939 85-348 (350)
95 KOG0301|consensus 99.9 1.4E-21 3E-26 239.5 26.7 282 1683-1984 5-290 (745)
96 KOG0299|consensus 99.9 3.6E-21 7.7E-26 228.1 29.0 286 1685-1980 135-454 (479)
97 KOG0308|consensus 99.9 2.3E-22 4.9E-27 244.7 18.4 287 1691-1983 20-328 (735)
98 KOG1446|consensus 99.9 2.2E-20 4.7E-25 214.4 33.5 268 1725-2003 5-281 (311)
99 KOG0641|consensus 99.9 3.8E-20 8.3E-25 202.0 32.9 295 1682-1982 23-349 (350)
100 KOG0294|consensus 99.9 7.9E-21 1.7E-25 216.8 28.2 263 1707-1984 4-283 (362)
101 KOG0650|consensus 99.9 3.4E-21 7.4E-26 232.3 26.5 430 1512-1979 243-732 (733)
102 KOG2096|consensus 99.9 9.4E-21 2E-25 215.5 27.1 296 1685-1984 79-404 (420)
103 KOG0310|consensus 99.9 1E-20 2.2E-25 225.7 27.5 237 1691-1939 67-308 (487)
104 KOG1539|consensus 99.9 3E-20 6.6E-25 231.2 32.2 290 1690-1983 286-649 (910)
105 KOG0268|consensus 99.9 5.3E-22 1.1E-26 229.0 15.5 284 1552-1945 63-350 (433)
106 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 3E-19 6.5E-24 208.8 39.1 277 1704-1992 1-289 (300)
107 KOG0301|consensus 99.9 1E-20 2.2E-25 232.1 27.1 237 1686-1941 51-289 (745)
108 PTZ00421 coronin; Provisional 99.9 6.1E-20 1.3E-24 232.8 34.6 254 1736-1990 22-298 (493)
109 KOG0647|consensus 99.9 2.1E-20 4.6E-25 212.4 26.6 230 1689-1929 69-312 (347)
110 KOG0647|consensus 99.9 1.7E-20 3.7E-25 213.1 24.0 269 1691-1970 26-311 (347)
111 KOG0264|consensus 99.9 1.7E-21 3.8E-26 231.3 14.5 252 1689-1940 121-404 (422)
112 KOG1274|consensus 99.9 9.3E-20 2E-24 229.3 29.2 278 1689-1979 10-297 (933)
113 KOG0277|consensus 99.9 2.1E-20 4.6E-25 208.2 20.4 255 1738-2000 12-281 (311)
114 KOG0305|consensus 99.9 1.4E-19 2.9E-24 223.7 29.1 240 1692-1942 217-463 (484)
115 KOG0650|consensus 99.9 8.5E-21 1.8E-25 228.9 18.0 343 1517-1893 358-732 (733)
116 KOG0264|consensus 99.8 9.7E-20 2.1E-24 216.6 26.0 251 1732-1984 122-406 (422)
117 KOG1036|consensus 99.8 2.2E-19 4.7E-24 205.3 27.4 268 1692-1972 13-294 (323)
118 PTZ00420 coronin; Provisional 99.8 9.6E-19 2.1E-23 223.4 36.4 232 1752-1993 50-303 (568)
119 TIGR03866 PQQ_ABC_repeats PQQ- 99.8 4.5E-18 9.7E-23 198.9 39.3 254 1695-1962 33-300 (300)
120 KOG0289|consensus 99.8 1.3E-19 2.9E-24 213.0 25.4 259 1735-2003 220-482 (506)
121 KOG1063|consensus 99.8 3.9E-19 8.5E-24 218.1 29.4 342 1551-1982 263-699 (764)
122 KOG2055|consensus 99.8 1.9E-19 4.1E-24 213.2 25.3 283 1692-1982 213-512 (514)
123 KOG0639|consensus 99.8 5E-20 1.1E-24 218.1 20.2 282 1689-1981 416-703 (705)
124 KOG0646|consensus 99.8 9.5E-20 2.1E-24 216.6 22.2 267 1714-1991 18-316 (476)
125 KOG1273|consensus 99.8 1.9E-19 4.2E-24 204.8 23.5 286 1695-1990 26-330 (405)
126 KOG0294|consensus 99.8 6.1E-19 1.3E-23 201.5 26.3 265 1680-1960 31-305 (362)
127 KOG2106|consensus 99.8 6.8E-18 1.5E-22 201.2 35.2 303 1693-2003 247-602 (626)
128 KOG4283|consensus 99.8 4.2E-19 9.1E-24 200.5 23.3 283 1689-1981 40-364 (397)
129 KOG2048|consensus 99.8 3.8E-18 8.1E-23 209.8 33.2 241 1693-1941 70-320 (691)
130 KOG1274|consensus 99.8 1.3E-18 2.8E-23 219.2 29.7 246 1731-1983 10-263 (933)
131 KOG2055|consensus 99.8 1.4E-18 3E-23 206.0 26.5 291 1550-1940 208-512 (514)
132 KOG1332|consensus 99.8 1.9E-19 4.2E-24 199.7 17.6 249 1687-1939 6-285 (299)
133 KOG0646|consensus 99.8 9.7E-19 2.1E-23 208.1 24.6 233 1692-1964 81-331 (476)
134 KOG1036|consensus 99.8 8.5E-19 1.9E-23 200.5 22.8 249 1733-1993 12-273 (323)
135 KOG2096|consensus 99.8 1.7E-18 3.6E-23 197.4 24.3 304 1549-1894 80-400 (420)
136 COG2319 FOG: WD40 repeat [Gene 99.8 2E-16 4.4E-21 186.3 42.9 370 1551-1983 61-443 (466)
137 KOG2048|consensus 99.8 7.6E-18 1.6E-22 207.1 30.8 266 1731-2003 22-297 (691)
138 KOG0300|consensus 99.8 7E-19 1.5E-23 199.4 19.6 324 1551-1898 144-478 (481)
139 KOG2445|consensus 99.8 1E-17 2.3E-22 191.0 28.2 285 1689-1998 10-334 (361)
140 KOG0269|consensus 99.8 5.4E-19 1.2E-23 219.0 17.6 286 1693-1984 40-342 (839)
141 KOG0639|consensus 99.8 9.2E-19 2E-23 207.5 17.7 249 1732-1986 417-667 (705)
142 KOG4328|consensus 99.8 6.8E-18 1.5E-22 200.2 24.5 299 1681-1983 175-496 (498)
143 KOG2445|consensus 99.8 2.3E-17 5.1E-22 188.1 25.4 254 1551-1896 9-318 (361)
144 KOG1332|consensus 99.8 4.9E-18 1.1E-22 188.7 18.9 258 1731-1991 8-295 (299)
145 KOG1445|consensus 99.8 1.1E-17 2.5E-22 201.6 22.3 116 1869-1984 630-752 (1012)
146 KOG0267|consensus 99.8 4.3E-19 9.4E-24 218.3 10.4 255 1705-1974 5-260 (825)
147 KOG1273|consensus 99.8 3.2E-17 7E-22 186.9 24.1 281 1558-1940 26-322 (405)
148 KOG0321|consensus 99.8 1.8E-17 4E-22 202.2 23.1 283 1698-1984 55-393 (720)
149 KOG0269|consensus 99.8 5.4E-18 1.2E-22 210.3 18.0 263 1736-2002 41-314 (839)
150 COG2319 FOG: WD40 repeat [Gene 99.8 2.9E-15 6.3E-20 176.6 39.7 290 1687-1985 60-362 (466)
151 KOG0267|consensus 99.8 1.3E-18 2.8E-23 214.2 10.2 240 1684-1932 20-260 (825)
152 KOG4283|consensus 99.7 1.6E-16 3.5E-21 179.8 24.3 265 1731-2002 40-340 (397)
153 KOG0321|consensus 99.7 6.9E-17 1.5E-21 197.2 22.7 291 1688-1981 96-444 (720)
154 KOG4378|consensus 99.7 4.7E-17 1E-21 193.2 20.0 261 1694-1964 36-305 (673)
155 KOG4378|consensus 99.7 1E-16 2.2E-21 190.4 21.5 281 1714-2003 12-299 (673)
156 KOG1538|consensus 99.7 2.8E-16 6E-21 190.6 24.4 273 1694-1983 14-294 (1081)
157 KOG0307|consensus 99.7 1.5E-17 3.2E-22 214.4 13.7 288 1696-1985 10-330 (1049)
158 KOG0302|consensus 99.7 2.1E-16 4.6E-21 184.0 21.4 248 1687-1938 146-436 (440)
159 KOG0322|consensus 99.7 1.2E-16 2.5E-21 179.4 17.6 289 1682-1981 4-322 (323)
160 KOG2919|consensus 99.7 7.6E-16 1.6E-20 176.5 23.4 275 1695-1973 52-361 (406)
161 KOG1240|consensus 99.7 1.6E-15 3.4E-20 195.2 27.6 306 1675-1980 1031-1431(1431)
162 KOG0270|consensus 99.7 4.9E-16 1.1E-20 184.4 21.0 211 1687-1945 238-454 (463)
163 KOG4328|consensus 99.7 1E-15 2.2E-20 182.0 22.2 279 1720-2004 172-470 (498)
164 KOG1517|consensus 99.7 1.5E-15 3.3E-20 192.4 24.5 295 1688-1985 1060-1384(1387)
165 KOG1188|consensus 99.7 7.7E-16 1.7E-20 178.1 19.8 274 1705-1982 41-346 (376)
166 KOG1009|consensus 99.7 4.1E-15 8.8E-20 175.2 25.6 316 1557-1987 15-377 (434)
167 KOG0302|consensus 99.7 1.5E-15 3.3E-20 177.0 21.8 246 1731-1980 148-436 (440)
168 KOG1034|consensus 99.7 3.5E-15 7.6E-20 171.8 23.4 287 1687-1982 33-383 (385)
169 KOG0307|consensus 99.7 5.1E-16 1.1E-20 200.5 16.1 245 1693-1943 65-330 (1049)
170 KOG0270|consensus 99.7 7.6E-15 1.7E-19 174.4 24.4 283 1697-1985 130-452 (463)
171 KOG1963|consensus 99.7 3.4E-14 7.3E-19 180.2 31.4 287 1689-1984 202-540 (792)
172 KOG4227|consensus 99.7 5.7E-15 1.2E-19 171.4 22.1 295 1683-1982 47-387 (609)
173 KOG0642|consensus 99.7 6.5E-16 1.4E-20 187.6 14.8 267 1681-1986 283-565 (577)
174 KOG1587|consensus 99.6 2.9E-14 6.2E-19 181.1 29.0 269 1714-1984 222-518 (555)
175 KOG1963|consensus 99.6 3.9E-14 8.4E-19 179.7 27.8 299 1685-1985 244-586 (792)
176 KOG2919|consensus 99.6 4.7E-14 1E-18 162.0 25.4 235 1693-1931 105-361 (406)
177 PRK11028 6-phosphogluconolacto 99.6 2.8E-13 6E-18 164.4 33.5 283 1708-1995 6-318 (330)
178 KOG1538|consensus 99.6 2.3E-14 5E-19 174.2 23.0 239 1685-1939 46-292 (1081)
179 KOG0644|consensus 99.6 2E-15 4.4E-20 187.6 11.5 290 1685-1991 183-477 (1113)
180 KOG1034|consensus 99.6 7.2E-14 1.6E-18 161.1 22.6 245 1691-1940 88-383 (385)
181 KOG2110|consensus 99.6 1.8E-12 3.8E-17 152.1 33.7 291 1692-1994 5-344 (391)
182 KOG1334|consensus 99.6 9.2E-15 2E-19 174.8 14.2 298 1684-1984 134-468 (559)
183 KOG1007|consensus 99.6 3.2E-14 7E-19 161.4 17.8 284 1685-1984 56-363 (370)
184 KOG0644|consensus 99.6 4.6E-15 9.9E-20 184.6 11.8 281 1554-1944 189-472 (1113)
185 KOG0303|consensus 99.6 1.6E-13 3.4E-18 161.1 23.5 233 1729-1963 76-320 (472)
186 KOG0649|consensus 99.6 7.5E-13 1.6E-17 147.6 27.5 275 1693-1980 11-314 (325)
187 KOG1587|consensus 99.6 8.2E-14 1.8E-18 177.0 22.6 249 1692-1940 242-516 (555)
188 PRK11028 6-phosphogluconolacto 99.6 6.8E-12 1.5E-16 152.3 36.0 244 1693-1940 35-304 (330)
189 KOG0642|consensus 99.6 3.5E-14 7.5E-19 172.8 15.7 261 1552-1904 291-569 (577)
190 KOG1009|consensus 99.5 3.2E-13 7E-18 159.4 21.8 289 1550-1945 60-377 (434)
191 KOG0649|consensus 99.5 1.4E-12 3E-17 145.5 24.2 240 1736-1983 12-275 (325)
192 KOG4227|consensus 99.5 9.7E-13 2.1E-17 153.1 21.5 295 1551-1939 52-386 (609)
193 KOG1517|consensus 99.5 3.5E-12 7.6E-17 162.6 26.2 243 1693-1942 1110-1383(1387)
194 KOG0322|consensus 99.5 6E-13 1.3E-17 150.0 16.7 290 1547-1939 6-322 (323)
195 KOG1523|consensus 99.5 4.2E-12 9.2E-17 146.6 21.9 208 1689-1899 7-239 (361)
196 KOG1524|consensus 99.5 3E-12 6.6E-17 154.1 20.9 208 1705-1937 76-283 (737)
197 PF02239 Cytochrom_D1: Cytochr 99.4 5.8E-11 1.3E-15 146.9 32.3 297 1685-1991 29-356 (369)
198 KOG1524|consensus 99.4 3E-12 6.5E-17 154.1 20.0 262 1690-1978 12-282 (737)
199 KOG2394|consensus 99.4 4.2E-12 9.2E-17 153.6 20.5 191 1795-1987 187-457 (636)
200 KOG0290|consensus 99.4 1.1E-11 2.5E-16 141.2 22.4 246 1735-1984 45-320 (364)
201 KOG2110|consensus 99.4 3.6E-11 7.7E-16 141.3 27.0 237 1734-1984 5-250 (391)
202 PRK01742 tolB translocation pr 99.4 6.6E-12 1.4E-16 158.4 22.8 233 1713-1963 183-426 (429)
203 KOG4497|consensus 99.4 3.4E-11 7.4E-16 138.9 25.4 272 1694-1984 50-393 (447)
204 KOG0290|consensus 99.4 8.2E-12 1.8E-16 142.4 19.8 237 1690-1931 94-357 (364)
205 KOG0771|consensus 99.4 1.6E-11 3.5E-16 146.4 23.1 197 1786-1984 148-356 (398)
206 KOG1007|consensus 99.4 1.1E-11 2.5E-16 141.0 20.6 207 1683-1896 113-361 (370)
207 KOG1445|consensus 99.4 3.6E-12 7.8E-17 155.0 17.1 243 1742-1986 587-848 (1012)
208 KOG0303|consensus 99.4 8.9E-12 1.9E-16 146.6 19.4 207 1776-1985 75-297 (472)
209 KOG1240|consensus 99.4 2.8E-11 6E-16 156.9 25.6 265 1719-1985 1034-1337(1431)
210 KOG0771|consensus 99.4 3.8E-12 8.3E-17 151.7 16.3 197 1696-1897 148-355 (398)
211 KOG1310|consensus 99.4 5.2E-12 1.1E-16 152.4 15.9 221 1684-1904 42-311 (758)
212 KOG2321|consensus 99.4 7E-11 1.5E-15 144.0 24.3 281 1690-1983 49-344 (703)
213 KOG1334|consensus 99.4 6.8E-12 1.5E-16 150.7 15.0 292 1551-1941 138-467 (559)
214 KOG2111|consensus 99.3 6.6E-10 1.4E-14 128.9 29.8 235 1695-1941 8-257 (346)
215 KOG3881|consensus 99.3 6.7E-11 1.4E-15 139.8 21.3 250 1734-1986 55-324 (412)
216 KOG2111|consensus 99.3 2.3E-10 5E-15 132.6 24.7 239 1736-1984 7-258 (346)
217 KOG2139|consensus 99.3 3.9E-10 8.4E-15 132.0 26.3 285 1693-1983 99-432 (445)
218 KOG1523|consensus 99.3 2.2E-10 4.8E-15 132.7 22.9 261 1729-1995 5-291 (361)
219 PRK01742 tolB translocation pr 99.3 1E-10 2.2E-15 147.7 21.6 223 1685-1921 196-426 (429)
220 KOG1272|consensus 99.3 1E-11 2.2E-16 148.5 11.7 271 1692-1978 129-405 (545)
221 KOG1272|consensus 99.3 7E-12 1.5E-16 149.8 9.7 233 1734-1981 129-361 (545)
222 PRK03629 tolB translocation pr 99.3 1.6E-09 3.4E-14 137.0 30.3 234 1714-1963 179-428 (429)
223 KOG1188|consensus 99.3 8.6E-11 1.9E-15 136.9 17.0 191 1794-1985 41-245 (376)
224 PF02239 Cytochrom_D1: Cytochr 99.2 4.1E-09 8.8E-14 130.7 32.0 248 1694-1949 79-356 (369)
225 KOG2321|consensus 99.2 3.4E-10 7.4E-15 138.2 21.1 200 1696-1897 137-344 (703)
226 PRK05137 tolB translocation pr 99.2 3.7E-09 7.9E-14 133.9 30.8 220 1714-1986 182-416 (435)
227 PRK04922 tolB translocation pr 99.2 1.5E-09 3.3E-14 137.3 27.1 233 1714-1962 184-432 (433)
228 PRK02889 tolB translocation pr 99.2 1.1E-09 2.5E-14 138.2 25.6 235 1713-1963 175-425 (427)
229 KOG1409|consensus 99.2 7.9E-10 1.7E-14 129.0 21.6 253 1680-1939 12-269 (404)
230 PF08662 eIF2A: Eukaryotic tra 99.2 9.7E-10 2.1E-14 124.7 21.7 151 1828-1985 9-182 (194)
231 KOG2315|consensus 99.2 7.7E-09 1.7E-13 127.2 30.1 275 1692-1985 34-393 (566)
232 KOG3881|consensus 99.2 1.3E-09 2.8E-14 129.2 21.0 266 1691-1963 54-342 (412)
233 KOG1310|consensus 99.2 1.7E-10 3.6E-15 139.7 13.4 211 1775-1985 43-306 (758)
234 KOG4497|consensus 99.2 1.9E-09 4E-14 124.9 21.1 273 1687-1977 86-427 (447)
235 PF10282 Lactonase: Lactonase, 99.2 2.9E-07 6.2E-12 113.5 41.7 278 1707-1986 2-328 (345)
236 COG5354 Uncharacterized protei 99.1 1.4E-08 3.1E-13 123.6 28.5 279 1694-1987 73-400 (561)
237 PRK05137 tolB translocation pr 99.1 7.4E-09 1.6E-13 131.1 27.6 225 1683-1962 192-432 (435)
238 KOG1354|consensus 99.1 3.8E-09 8.2E-14 123.2 22.0 280 1692-1985 25-362 (433)
239 PRK04922 tolB translocation pr 99.1 1.4E-08 3E-13 128.6 29.1 215 1756-1985 184-414 (433)
240 KOG2394|consensus 99.1 9.4E-10 2E-14 133.8 15.7 196 1702-1919 183-383 (636)
241 PRK03629 tolB translocation pr 99.1 3E-08 6.6E-13 125.5 30.0 214 1757-1985 180-409 (429)
242 KOG2041|consensus 99.1 8E-09 1.7E-13 127.8 23.2 285 1693-1988 15-343 (1189)
243 KOG2314|consensus 99.1 1.5E-08 3.2E-13 123.8 24.5 282 1696-1984 214-575 (698)
244 TIGR03300 assembly_YfgL outer 99.1 1E-07 2.3E-12 118.2 32.7 269 1704-1991 65-347 (377)
245 PRK02889 tolB translocation pr 99.1 1E-08 2.2E-13 129.7 23.9 223 1685-1920 188-424 (427)
246 KOG2139|consensus 99.0 1.4E-08 2.9E-13 119.4 21.8 244 1735-1988 99-389 (445)
247 PF04762 IKI3: IKI3 family; I 99.0 5E-07 1.1E-11 123.2 40.1 290 1691-1984 208-566 (928)
248 TIGR02800 propeller_TolB tol-p 99.0 7.8E-08 1.7E-12 120.4 29.6 232 1713-1960 169-416 (417)
249 KOG0974|consensus 99.0 6.7E-09 1.4E-13 134.8 19.2 275 1692-1984 7-290 (967)
250 KOG2315|consensus 99.0 1.3E-07 2.7E-12 116.8 29.1 251 1696-1962 129-410 (566)
251 PF10282 Lactonase: Lactonase, 99.0 7.8E-07 1.7E-11 109.6 36.4 267 1694-1960 38-345 (345)
252 PRK00178 tolB translocation pr 99.0 1.6E-07 3.4E-12 118.7 30.4 233 1715-1963 180-428 (430)
253 KOG1064|consensus 99.0 1.3E-09 2.7E-14 145.3 11.7 201 1687-1905 2203-2407(2439)
254 TIGR03300 assembly_YfgL outer 99.0 1.2E-07 2.5E-12 117.7 28.5 263 1703-1979 104-376 (377)
255 KOG1354|consensus 99.0 4.5E-08 9.7E-13 114.5 22.6 231 1693-1942 85-361 (433)
256 PRK04792 tolB translocation pr 99.0 1.5E-07 3.4E-12 119.7 28.9 232 1715-1962 199-446 (448)
257 KOG2041|consensus 99.0 1.3E-07 2.8E-12 117.5 26.6 244 1685-1940 64-337 (1189)
258 PF08662 eIF2A: Eukaryotic tra 98.9 4.7E-08 1E-12 111.1 20.9 119 1822-1948 57-186 (194)
259 TIGR02658 TTQ_MADH_Hv methylam 98.9 2.9E-06 6.2E-11 104.2 36.0 263 1714-1990 27-338 (352)
260 KOG4190|consensus 98.9 3.7E-09 8E-14 127.4 10.7 288 1683-1978 726-1032(1034)
261 TIGR02800 propeller_TolB tol-p 98.9 6.1E-07 1.3E-11 112.4 30.3 213 1757-1984 171-399 (417)
262 KOG4547|consensus 98.9 1.2E-07 2.6E-12 117.8 22.3 187 1793-1983 5-221 (541)
263 KOG0280|consensus 98.9 8.3E-08 1.8E-12 110.8 19.4 265 1713-1984 45-335 (339)
264 KOG0309|consensus 98.9 1.8E-08 3.9E-13 125.5 13.9 289 1691-1984 23-341 (1081)
265 COG4946 Uncharacterized protei 98.8 4.2E-06 9.2E-11 101.2 31.7 122 1865-1989 358-484 (668)
266 KOG1409|consensus 98.8 4E-07 8.8E-12 106.9 22.5 196 1693-1896 69-270 (404)
267 KOG4547|consensus 98.8 3.8E-07 8.3E-12 113.5 23.6 191 1744-1941 3-221 (541)
268 PRK00178 tolB translocation pr 98.8 8.8E-07 1.9E-11 112.0 27.2 221 1685-1920 191-427 (430)
269 COG5354 Uncharacterized protei 98.8 1.8E-06 3.9E-11 105.8 27.0 278 1691-1984 31-350 (561)
270 PRK01029 tolB translocation pr 98.8 1.7E-06 3.6E-11 109.8 28.2 239 1714-1964 165-426 (428)
271 COG2706 3-carboxymuconate cycl 98.8 1.5E-05 3.2E-10 95.4 33.8 269 1713-1983 15-322 (346)
272 KOG0974|consensus 98.8 1.4E-07 3.1E-12 122.8 17.9 195 1735-1940 88-288 (967)
273 TIGR02658 TTQ_MADH_Hv methylam 98.7 5.6E-06 1.2E-10 101.7 30.6 237 1700-1948 53-338 (352)
274 PRK01029 tolB translocation pr 98.7 2.5E-06 5.5E-11 108.2 27.8 227 1687-1922 179-426 (428)
275 KOG1064|consensus 98.7 3.8E-08 8.1E-13 131.8 11.3 194 1784-1991 2210-2407(2439)
276 PLN02919 haloacid dehalogenase 98.7 7.2E-06 1.6E-10 114.0 34.1 200 1785-1986 626-892 (1057)
277 PF13360 PQQ_2: PQQ-like domai 98.7 1.1E-05 2.3E-10 93.1 30.1 222 1712-1947 1-237 (238)
278 PRK11138 outer membrane biogen 98.7 5.5E-06 1.2E-10 103.9 29.2 271 1704-1991 69-362 (394)
279 PLN02919 haloacid dehalogenase 98.7 1.2E-05 2.6E-10 111.8 34.4 241 1696-1944 571-892 (1057)
280 PRK11138 outer membrane biogen 98.7 5.8E-06 1.2E-10 103.7 28.6 265 1704-1981 120-393 (394)
281 PRK04792 tolB translocation pr 98.7 1.5E-06 3.2E-11 110.9 23.7 219 1687-1920 212-446 (448)
282 PF04762 IKI3: IKI3 family; I 98.7 6E-06 1.3E-10 112.9 30.4 279 1691-1981 74-378 (928)
283 KOG4532|consensus 98.7 3.2E-06 7E-11 96.8 22.8 259 1713-1985 51-334 (344)
284 COG2706 3-carboxymuconate cycl 98.6 5.9E-05 1.3E-09 90.4 33.0 269 1690-1961 37-345 (346)
285 KOG1912|consensus 98.6 2.1E-06 4.5E-11 108.5 20.7 311 1683-2003 46-473 (1062)
286 KOG0309|consensus 98.6 1.7E-07 3.7E-12 117.1 11.1 291 1554-1896 23-339 (1081)
287 KOG0280|consensus 98.6 2.9E-06 6.2E-11 98.4 19.6 243 1691-1939 68-332 (339)
288 KOG1832|consensus 98.5 8.7E-08 1.9E-12 121.0 6.5 265 1681-1970 1090-1377(1516)
289 PF08450 SGL: SMP-30/Gluconola 98.5 0.00013 2.7E-09 85.7 32.6 219 1739-1970 4-243 (246)
290 PF13360 PQQ_2: PQQ-like domai 98.5 7E-05 1.5E-09 86.3 29.2 221 1755-1986 2-234 (238)
291 KOG2314|consensus 98.4 3.6E-05 7.9E-10 95.1 25.4 224 1697-1932 310-559 (698)
292 KOG4190|consensus 98.4 7.3E-07 1.6E-11 108.2 10.9 250 1727-1982 728-988 (1034)
293 KOG0882|consensus 98.4 4.1E-06 8.8E-11 101.2 17.0 282 1691-1979 8-369 (558)
294 KOG1912|consensus 98.4 9.4E-06 2E-10 102.8 20.2 283 1692-1985 15-367 (1062)
295 PRK04043 tolB translocation pr 98.4 0.00017 3.7E-09 91.5 32.0 173 1804-1986 214-404 (419)
296 COG4946 Uncharacterized protei 98.4 0.00017 3.6E-09 87.9 29.8 172 1703-1886 331-508 (668)
297 COG5170 CDC55 Serine/threonine 98.4 5.6E-06 1.2E-10 96.0 16.7 248 1691-1939 25-366 (460)
298 PF15492 Nbas_N: Neuroblastoma 98.4 5.7E-05 1.2E-09 88.3 24.6 241 1697-1951 2-270 (282)
299 KOG3914|consensus 98.4 3E-06 6.5E-11 101.9 14.5 162 1738-1905 66-232 (390)
300 PRK04043 tolB translocation pr 98.4 0.00011 2.4E-09 93.2 28.3 207 1694-1955 189-414 (419)
301 KOG4714|consensus 98.4 5.6E-06 1.2E-10 94.7 14.7 196 1695-1897 39-255 (319)
302 COG5170 CDC55 Serine/threonine 98.3 7.7E-06 1.7E-10 94.9 15.5 245 1734-1981 26-366 (460)
303 KOG4532|consensus 98.3 3.7E-05 8E-10 88.4 20.6 202 1793-1994 84-294 (344)
304 KOG3914|consensus 98.3 4.4E-06 9.6E-11 100.5 12.2 157 1827-1988 65-229 (390)
305 PF08450 SGL: SMP-30/Gluconola 98.2 0.0016 3.4E-08 76.5 32.2 218 1697-1929 4-244 (246)
306 KOG4714|consensus 98.2 9.4E-06 2E-10 92.9 11.9 166 1684-1855 81-255 (319)
307 cd00216 PQQ_DH Dehydrogenases 98.2 0.00032 7E-09 90.8 27.7 276 1704-1991 61-433 (488)
308 KOG1920|consensus 98.1 0.00037 8E-09 93.2 26.4 271 1693-1981 69-364 (1265)
309 KOG1275|consensus 98.1 3.2E-05 6.9E-10 99.9 16.2 182 1792-1981 146-341 (1118)
310 KOG2114|consensus 98.1 0.00031 6.7E-09 91.1 24.5 225 1694-1958 27-262 (933)
311 KOG2695|consensus 98.1 7.4E-06 1.6E-10 96.6 9.2 151 1796-1950 227-386 (425)
312 KOG4649|consensus 98.0 0.0015 3.3E-08 75.4 25.5 263 1703-1984 62-353 (354)
313 PF15492 Nbas_N: Neuroblastoma 98.0 0.00094 2E-08 78.5 24.2 194 1790-1984 5-261 (282)
314 KOG0882|consensus 98.0 1.7E-05 3.6E-10 96.1 10.0 210 1780-1990 7-239 (558)
315 PF08596 Lgl_C: Lethal giant l 98.0 0.001 2.2E-08 83.7 24.9 212 1680-1894 74-333 (395)
316 KOG2695|consensus 98.0 2.1E-05 4.6E-10 92.9 9.0 150 1840-1994 228-388 (425)
317 PF07433 DUF1513: Protein of u 98.0 0.0049 1.1E-07 74.4 28.8 233 1695-1975 7-278 (305)
318 KOG2066|consensus 97.9 0.00022 4.8E-09 91.9 17.6 183 1692-1897 39-234 (846)
319 KOG1832|consensus 97.9 7.8E-06 1.7E-10 104.1 3.7 218 1725-1968 1092-1317(1516)
320 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.8 0.013 2.9E-07 76.6 32.9 284 1704-1992 69-500 (527)
321 KOG1645|consensus 97.8 0.00054 1.2E-08 82.8 17.9 244 1685-1940 186-461 (463)
322 KOG1920|consensus 97.8 0.0023 5.1E-08 85.9 25.3 210 1782-1998 68-337 (1265)
323 cd00216 PQQ_DH Dehydrogenases 97.8 0.0046 9.9E-08 80.3 28.1 239 1705-1950 111-434 (488)
324 PF00400 WD40: WD domain, G-be 97.8 3.1E-05 6.7E-10 64.6 5.1 38 1683-1720 2-39 (39)
325 KOG2066|consensus 97.7 0.00053 1.2E-08 88.6 16.9 183 1784-1983 41-234 (846)
326 PF06433 Me-amine-dh_H: Methyl 97.7 0.012 2.6E-07 71.8 27.5 270 1714-1994 17-332 (342)
327 PF11768 DUF3312: Protein of u 97.7 0.015 3.3E-07 74.2 29.3 75 1908-1984 257-331 (545)
328 KOG3617|consensus 97.7 0.00038 8.2E-09 89.1 15.1 262 1695-1970 62-373 (1416)
329 PF00400 WD40: WD domain, G-be 97.7 8.2E-05 1.8E-09 62.1 6.4 39 1942-1980 1-39 (39)
330 KOG1645|consensus 97.7 0.0023 4.9E-08 77.7 20.5 256 1716-1983 175-462 (463)
331 PF04841 Vps16_N: Vps16, N-ter 97.7 0.031 6.8E-07 71.1 31.6 267 1698-1989 34-321 (410)
332 PF08596 Lgl_C: Lethal giant l 97.7 0.005 1.1E-07 77.7 24.1 277 1694-1981 3-334 (395)
333 KOG3621|consensus 97.6 0.0067 1.5E-07 78.1 23.7 143 1691-1833 32-179 (726)
334 PF07433 DUF1513: Protein of u 97.6 0.0093 2E-07 72.0 23.0 187 1804-1992 29-257 (305)
335 KOG2114|consensus 97.5 0.0025 5.4E-08 83.1 18.7 194 1789-1985 31-246 (933)
336 PRK02888 nitrous-oxide reducta 97.5 0.032 6.9E-07 72.8 28.6 270 1702-1985 139-477 (635)
337 COG3391 Uncharacterized conser 97.5 0.15 3.3E-06 64.4 34.1 268 1716-1994 13-295 (381)
338 PRK02888 nitrous-oxide reducta 97.4 0.0081 1.8E-07 78.1 21.6 134 1845-1983 214-405 (635)
339 PF04053 Coatomer_WDAD: Coatom 97.4 0.023 5.1E-07 72.7 25.3 222 1732-1982 30-262 (443)
340 PF06433 Me-amine-dh_H: Methyl 97.4 0.078 1.7E-06 65.0 28.0 243 1697-1950 40-330 (342)
341 PF14583 Pectate_lyase22: Olig 97.4 0.14 3E-06 64.0 30.2 274 1697-1982 40-381 (386)
342 PF00930 DPPIV_N: Dipeptidyl p 97.4 0.081 1.8E-06 65.9 28.9 262 1692-1971 42-346 (353)
343 PF03178 CPSF_A: CPSF A subuni 97.4 0.071 1.5E-06 65.4 27.9 219 1714-1937 2-262 (321)
344 KOG1275|consensus 97.4 0.0026 5.6E-08 83.1 15.5 181 1703-1894 146-340 (1118)
345 PF00780 CNH: CNH domain; Int 97.3 0.097 2.1E-06 62.4 27.3 234 1702-1951 5-266 (275)
346 PF04053 Coatomer_WDAD: Coatom 97.3 0.03 6.5E-07 71.7 24.1 226 1685-1940 25-262 (443)
347 PF03178 CPSF_A: CPSF A subuni 97.2 0.059 1.3E-06 66.1 25.2 172 1803-1979 62-262 (321)
348 PF00780 CNH: CNH domain; Int 97.2 0.16 3.4E-06 60.6 27.4 228 1744-1991 5-264 (275)
349 KOG4649|consensus 97.1 0.11 2.4E-06 60.6 23.7 190 1746-1948 23-214 (354)
350 PF14870 PSII_BNR: Photosynthe 97.1 0.41 9E-06 58.6 30.1 274 1692-1979 16-301 (302)
351 PF08553 VID27: VID27 cytoplas 97.1 0.016 3.4E-07 77.9 19.2 136 1712-1853 502-646 (794)
352 PF06977 SdiA-regulated: SdiA- 97.1 0.18 3.9E-06 60.1 26.2 206 1685-1893 14-247 (248)
353 KOG3617|consensus 97.1 0.012 2.6E-07 76.2 17.1 93 1801-1896 39-131 (1416)
354 COG3391 Uncharacterized conser 97.1 0.39 8.6E-06 60.7 30.6 259 1694-1962 32-308 (381)
355 KOG1008|consensus 97.0 0.00044 9.5E-09 87.3 4.1 244 1692-1939 56-334 (783)
356 PF06977 SdiA-regulated: SdiA- 97.0 0.19 4.1E-06 59.9 24.9 201 1776-1979 15-247 (248)
357 PF11768 DUF3312: Protein of u 97.0 0.043 9.2E-07 70.3 20.5 93 1806-1900 239-333 (545)
358 KOG1008|consensus 97.0 0.00025 5.4E-09 89.4 1.0 183 1795-1982 72-275 (783)
359 PF04841 Vps16_N: Vps16, N-ter 96.9 0.26 5.6E-06 63.0 27.5 177 1783-1968 81-275 (410)
360 PF02897 Peptidase_S9_N: Proly 96.9 0.57 1.2E-05 59.4 30.3 244 1694-1945 125-409 (414)
361 KOG3621|consensus 96.8 0.0048 1E-07 79.4 10.2 115 1868-1983 35-155 (726)
362 TIGR03074 PQQ_membr_DH membran 96.7 1.5 3.1E-05 60.2 33.4 200 1704-1903 194-484 (764)
363 COG3386 Gluconolactonase [Carb 96.6 0.29 6.4E-06 60.1 23.9 220 1741-1971 31-274 (307)
364 KOG1897|consensus 96.6 0.89 1.9E-05 61.4 29.1 286 1694-1989 585-907 (1096)
365 PF08553 VID27: VID27 cytoplas 96.6 0.1 2.2E-06 70.4 21.1 136 1844-1981 502-646 (794)
366 PF14870 PSII_BNR: Photosynthe 96.4 1.6 3.4E-05 53.7 27.5 247 1734-1992 16-270 (302)
367 PRK13684 Ycf48-like protein; P 96.3 4.2 9.2E-05 50.7 31.9 275 1692-1982 45-331 (334)
368 PHA02713 hypothetical protein; 96.3 0.21 4.6E-06 66.1 21.4 228 1715-1952 273-545 (557)
369 KOG4441|consensus 96.3 0.2 4.4E-06 66.4 21.0 200 1785-1992 325-555 (571)
370 TIGR03074 PQQ_membr_DH membran 96.2 0.73 1.6E-05 63.0 26.0 198 1793-1991 194-486 (764)
371 COG0823 TolB Periplasmic compo 96.2 0.16 3.4E-06 65.0 18.5 163 1823-1990 191-366 (425)
372 TIGR03075 PQQ_enz_alc_DH PQQ-d 96.2 0.38 8.3E-06 63.4 22.4 192 1793-1987 69-338 (527)
373 PHA02713 hypothetical protein; 96.1 0.22 4.7E-06 66.0 20.2 193 1789-1991 300-541 (557)
374 PF14655 RAB3GAP2_N: Rab3 GTPa 96.1 0.56 1.2E-05 59.7 22.4 85 1864-1949 305-407 (415)
375 COG5276 Uncharacterized conser 96.1 4.7 0.0001 48.6 27.8 276 1693-1982 87-369 (370)
376 KOG1897|consensus 96.0 4 8.7E-05 55.6 30.1 286 1693-1986 488-860 (1096)
377 PRK13616 lipoprotein LpqB; Pro 96.0 0.46 9.9E-06 63.3 22.0 199 1691-1936 348-564 (591)
378 COG0823 TolB Periplasmic compo 96.0 0.43 9.3E-06 61.2 21.0 202 1716-1931 175-390 (425)
379 KOG4640|consensus 95.9 0.03 6.6E-07 71.6 10.1 95 1824-1920 20-115 (665)
380 PF02897 Peptidase_S9_N: Proly 95.9 5.2 0.00011 50.9 30.1 240 1737-1986 126-408 (414)
381 smart00320 WD40 WD40 repeats. 95.8 0.011 2.5E-07 45.8 4.1 37 1684-1720 4-40 (40)
382 KOG2444|consensus 95.8 0.01 2.2E-07 68.3 4.8 143 1839-1984 33-179 (238)
383 smart00320 WD40 WD40 repeats. 95.7 0.025 5.4E-07 43.8 5.6 39 1942-1980 2-40 (40)
384 PHA03098 kelch-like protein; P 95.6 0.35 7.5E-06 63.6 19.0 188 1804-2000 312-528 (534)
385 KOG4441|consensus 95.6 0.56 1.2E-05 62.3 20.7 228 1702-1941 283-547 (571)
386 PF00930 DPPIV_N: Dipeptidyl p 95.6 3.8 8.2E-05 51.3 26.7 263 1701-1982 1-315 (353)
387 KOG2395|consensus 95.5 0.14 3E-06 64.8 13.4 138 1840-1981 350-499 (644)
388 PF05096 Glu_cyclase_2: Glutam 95.4 3 6.4E-05 50.2 23.4 183 1784-1971 46-249 (264)
389 KOG2395|consensus 95.4 0.13 2.9E-06 64.8 12.7 141 1707-1854 349-500 (644)
390 COG3386 Gluconolactonase [Carb 95.3 3.2 7E-05 51.2 24.4 220 1698-1929 30-274 (307)
391 KOG4640|consensus 95.3 0.072 1.6E-06 68.4 10.3 76 1691-1767 19-95 (665)
392 PRK10115 protease 2; Provision 95.2 8.5 0.00018 52.7 30.2 239 1693-1943 127-397 (686)
393 PF14783 BBS2_Mid: Ciliary BBS 94.9 0.76 1.6E-05 48.3 14.5 101 1827-1936 2-110 (111)
394 PF14583 Pectate_lyase22: Olig 94.9 16 0.00034 46.4 31.0 256 1720-1986 16-332 (386)
395 PRK13616 lipoprotein LpqB; Pro 94.9 0.6 1.3E-05 62.2 17.5 148 1825-1982 350-525 (591)
396 PF14655 RAB3GAP2_N: Rab3 GTPa 94.9 2 4.4E-05 54.8 21.3 83 1910-1992 307-408 (415)
397 PF05096 Glu_cyclase_2: Glutam 94.8 11 0.00023 45.6 25.8 195 1726-1930 35-250 (264)
398 PF07995 GSDH: Glucose / Sorbo 94.8 9.8 0.00021 47.4 26.8 238 1694-1935 3-330 (331)
399 PF14727 PHTB1_N: PTHB1 N-term 94.4 22 0.00048 45.8 29.8 272 1703-1985 36-363 (418)
400 KOG2079|consensus 94.3 0.49 1.1E-05 64.2 14.4 99 1795-1895 101-202 (1206)
401 TIGR03118 PEPCTERM_chp_1 conse 94.1 19 0.00041 44.1 26.4 225 1737-1962 25-307 (336)
402 KOG2079|consensus 94.0 0.13 2.9E-06 69.2 8.6 103 1877-1982 98-203 (1206)
403 COG3204 Uncharacterized protei 94.0 5.5 0.00012 48.3 20.7 172 1688-1897 81-264 (316)
404 PLN00033 photosystem II stabil 93.9 26 0.00056 45.0 34.3 148 1827-1979 241-396 (398)
405 PRK13684 Ycf48-like protein; P 93.9 15 0.00033 45.8 25.9 121 1866-1991 172-296 (334)
406 PF10647 Gmad1: Lipoprotein Lp 93.9 2.9 6.3E-05 50.1 18.8 155 1826-1983 25-198 (253)
407 COG3490 Uncharacterized protei 93.8 1.8 3.9E-05 51.8 16.1 163 1831-1993 120-321 (366)
408 PF14783 BBS2_Mid: Ciliary BBS 93.7 2 4.4E-05 45.2 14.7 100 1737-1849 2-109 (111)
409 COG3204 Uncharacterized protei 93.6 6.5 0.00014 47.7 20.5 164 1821-1984 82-265 (316)
410 COG3490 Uncharacterized protei 93.4 7.8 0.00017 46.7 20.4 232 1697-1939 72-347 (366)
411 PF05694 SBP56: 56kDa selenium 93.4 30 0.00064 44.5 26.6 197 1794-1990 88-350 (461)
412 KOG2444|consensus 93.3 0.098 2.1E-06 60.5 5.0 105 1792-1896 69-177 (238)
413 PHA03098 kelch-like protein; P 93.3 2.6 5.5E-05 55.6 18.8 189 1702-1900 293-515 (534)
414 PF05694 SBP56: 56kDa selenium 93.2 24 0.00052 45.3 25.4 225 1745-1971 86-392 (461)
415 COG5276 Uncharacterized conser 93.1 20 0.00044 43.6 23.1 195 1735-1941 87-286 (370)
416 KOG4499|consensus 92.4 8 0.00017 45.5 18.1 135 1825-1962 109-263 (310)
417 PHA02790 Kelch-like protein; P 92.1 4.8 0.00011 52.6 18.7 175 1804-1989 288-476 (480)
418 TIGR02604 Piru_Ver_Nterm putat 91.8 29 0.00064 43.8 24.5 147 1735-1885 14-202 (367)
419 COG1520 FOG: WD40-like repeat 91.2 51 0.0011 41.6 30.3 196 1702-1906 67-278 (370)
420 PF07995 GSDH: Glucose / Sorbo 90.7 19 0.00042 44.9 21.1 232 1737-1977 4-330 (331)
421 TIGR02604 Piru_Ver_Nterm putat 90.7 57 0.0012 41.3 27.1 147 1693-1843 14-202 (367)
422 PRK14131 N-acetylneuraminic ac 90.6 29 0.00063 44.0 22.8 41 1804-1845 107-149 (376)
423 PF14727 PHTB1_N: PTHB1 N-term 90.4 67 0.0014 41.6 27.7 147 1746-1895 37-203 (418)
424 PF12234 Rav1p_C: RAVE protein 90.3 4.7 0.0001 53.9 15.7 113 1867-1982 30-156 (631)
425 KOG2280|consensus 90.1 11 0.00024 50.4 18.4 196 1756-1964 64-271 (829)
426 TIGR03547 muta_rot_YjhT mutatr 90.1 28 0.00062 43.2 21.9 57 1788-1845 59-128 (346)
427 PRK05560 DNA gyrase subunit A; 90.0 87 0.0019 43.9 28.2 256 1700-1962 494-791 (805)
428 PHA02790 Kelch-like protein; P 89.6 8.5 0.00018 50.4 17.5 183 1704-1898 272-472 (480)
429 PF10168 Nup88: Nuclear pore c 89.3 35 0.00076 47.0 23.1 94 1735-1856 85-181 (717)
430 PLN02153 epithiospecifier prot 88.3 34 0.00075 42.6 20.8 190 1703-1899 32-287 (341)
431 PRK05560 DNA gyrase subunit A; 88.1 1.3E+02 0.0027 42.5 27.6 238 1743-1982 495-772 (805)
432 PLN02153 epithiospecifier prot 88.1 42 0.00092 41.8 21.4 183 1804-1991 51-292 (341)
433 KOG2280|consensus 88.0 24 0.00051 47.5 19.2 198 1714-1919 64-268 (829)
434 PF12894 Apc4_WD40: Anaphase-p 87.9 1.2 2.5E-05 40.0 5.4 35 1952-1986 11-45 (47)
435 TIGR03548 mutarot_permut cycli 87.9 37 0.00079 41.9 20.6 107 1792-1900 72-198 (323)
436 PF10433 MMS1_N: Mono-function 87.8 98 0.0021 40.9 25.5 232 1743-1986 219-480 (504)
437 PF15390 DUF4613: Domain of un 87.5 27 0.00059 46.0 18.9 159 1688-1855 15-187 (671)
438 COG1520 FOG: WD40-like repeat 87.4 91 0.002 39.3 29.9 199 1746-1951 68-279 (370)
439 KOG3630|consensus 87.3 4.6 0.0001 55.6 12.6 143 1825-1970 101-261 (1405)
440 KOG4499|consensus 87.3 64 0.0014 38.4 20.0 92 1827-1920 160-263 (310)
441 PLN02193 nitrile-specifier pro 87.1 53 0.0012 43.0 22.3 198 1791-1993 174-420 (470)
442 PF12234 Rav1p_C: RAVE protein 86.7 9.9 0.00022 51.0 15.3 132 1679-1811 16-156 (631)
443 COG4257 Vgb Streptogramin lyas 86.7 85 0.0018 38.2 23.1 240 1737-1984 64-307 (353)
444 PRK14131 N-acetylneuraminic ac 86.5 72 0.0016 40.5 22.4 41 1803-1844 189-230 (376)
445 TIGR01063 gyrA DNA gyrase, A s 85.7 1.8E+02 0.0039 41.0 27.4 240 1699-1940 491-769 (800)
446 COG4257 Vgb Streptogramin lyas 85.7 94 0.002 37.9 20.6 243 1693-1942 62-307 (353)
447 smart00036 CNH Domain found in 85.7 1E+02 0.0022 38.1 27.9 239 1703-1950 12-280 (302)
448 KOG1916|consensus 85.6 0.71 1.5E-05 61.4 4.0 92 1803-1895 153-264 (1283)
449 PF15390 DUF4613: Domain of un 85.6 9.3 0.0002 50.0 13.5 150 1825-1983 20-187 (671)
450 PF12894 Apc4_WD40: Anaphase-p 85.3 2 4.3E-05 38.5 5.5 34 1693-1727 12-45 (47)
451 TIGR03547 muta_rot_YjhT mutatr 85.0 1E+02 0.0022 38.3 22.5 42 1803-1845 168-210 (346)
452 PF10647 Gmad1: Lipoprotein Lp 84.6 95 0.0021 37.4 21.1 200 1784-1991 25-244 (253)
453 TIGR01063 gyrA DNA gyrase, A s 84.3 2E+02 0.0043 40.6 26.5 238 1743-1982 493-769 (800)
454 KOG1900|consensus 84.3 82 0.0018 45.2 22.2 144 1712-1855 97-273 (1311)
455 TIGR03118 PEPCTERM_chp_1 conse 83.9 1.2E+02 0.0026 37.6 26.3 223 1694-1920 24-307 (336)
456 PF08728 CRT10: CRT10; InterP 83.2 17 0.00038 49.2 15.2 145 1836-1981 49-245 (717)
457 COG3292 Predicted periplasmic 82.9 50 0.0011 43.5 18.1 271 1692-1977 164-442 (671)
458 KOG1916|consensus 82.6 1.5 3.3E-05 58.5 5.1 136 1714-1853 111-264 (1283)
459 PRK10115 protease 2; Provision 82.4 2.2E+02 0.0048 39.4 31.5 244 1735-1991 127-402 (686)
460 PF13449 Phytase-like: Esteras 82.0 53 0.0011 40.9 18.1 158 1824-1982 19-249 (326)
461 PF10168 Nup88: Nuclear pore c 81.9 22 0.00048 48.8 15.8 29 1824-1853 84-112 (717)
462 PF08728 CRT10: CRT10; InterP 81.8 23 0.00051 48.1 15.6 104 1792-1895 113-245 (717)
463 KOG3630|consensus 81.7 12 0.00026 52.0 12.7 130 1797-1927 118-260 (1405)
464 COG5167 VID27 Protein involved 81.6 14 0.0003 47.5 12.4 144 1835-1982 478-632 (776)
465 TIGR03548 mutarot_permut cycli 79.7 78 0.0017 39.1 18.5 109 1703-1816 72-199 (323)
466 PRK13979 DNA topoisomerase IV 79.4 3.1E+02 0.0068 39.3 31.2 156 1699-1854 511-689 (957)
467 PLN02193 nitrile-specifier pro 79.4 1.8E+02 0.0039 38.2 22.5 190 1704-1900 176-414 (470)
468 PF08801 Nucleoporin_N: Nup133 79.0 50 0.0011 42.4 17.1 32 1867-1898 190-221 (422)
469 COG1770 PtrB Protease II [Amin 78.5 2.6E+02 0.0057 38.0 26.7 206 1694-1902 130-354 (682)
470 KOG1900|consensus 77.0 17 0.00037 51.4 12.3 139 1843-1984 96-274 (1311)
471 KOG2377|consensus 77.0 31 0.00066 44.1 13.3 141 1786-1929 26-172 (657)
472 COG3823 Glutamine cyclotransfe 76.8 65 0.0014 37.8 14.8 180 1787-1971 50-247 (262)
473 KOG1983|consensus 76.8 40 0.00086 48.2 16.2 230 1693-1944 36-268 (993)
474 COG5290 IkappaB kinase complex 76.3 56 0.0012 44.2 15.7 259 1691-1964 75-348 (1243)
475 PLN00033 photosystem II stabil 75.2 2.6E+02 0.0056 36.2 27.2 142 1789-1937 245-396 (398)
476 COG5167 VID27 Protein involved 75.1 38 0.00083 43.7 13.5 146 1702-1854 477-632 (776)
477 PF11635 Med16: Mediator compl 74.0 1.3E+02 0.0029 41.9 19.9 182 1796-1977 65-345 (753)
478 KOG2247|consensus 73.8 0.66 1.4E-05 58.6 -1.7 148 1824-1976 34-182 (615)
479 PF02333 Phytase: Phytase; In 71.6 3E+02 0.0066 35.4 22.4 183 1794-1984 69-292 (381)
480 KOG4460|consensus 71.6 42 0.0009 43.6 12.7 26 1826-1851 105-130 (741)
481 PF14781 BBS2_N: Ciliary BBSom 70.5 1E+02 0.0022 34.0 13.7 114 1829-1948 3-133 (136)
482 COG4590 ABC-type uncharacteriz 69.3 28 0.00061 44.2 10.5 159 1821-1984 217-388 (733)
483 PF07569 Hira: TUP1-like enhan 69.1 29 0.00063 40.9 10.4 73 1917-1991 17-103 (219)
484 PF14761 HPS3_N: Hermansky-Pud 68.7 1.9E+02 0.0041 34.3 16.4 106 1792-1898 27-165 (215)
485 PF03022 MRJP: Major royal jel 68.5 3E+02 0.0064 34.0 21.0 165 1804-1971 35-254 (287)
486 PF03022 MRJP: Major royal jel 67.7 3.1E+02 0.0066 33.9 20.7 132 1796-1928 81-253 (287)
487 PF08801 Nucleoporin_N: Nup133 67.4 1.5E+02 0.0033 38.2 17.3 33 1952-1984 189-221 (422)
488 KOG2377|consensus 67.0 55 0.0012 41.9 12.3 119 1864-1984 64-187 (657)
489 KOG4460|consensus 67.0 65 0.0014 42.0 13.0 27 1868-1894 105-131 (741)
490 KOG2063|consensus 67.0 2E+02 0.0044 40.5 18.8 67 1700-1767 22-99 (877)
491 KOG2063|consensus 66.6 79 0.0017 44.3 14.9 75 1741-1815 21-100 (877)
492 PF07569 Hira: TUP1-like enhan 66.1 27 0.00058 41.3 9.3 68 1874-1942 18-97 (219)
493 PF13449 Phytase-like: Esteras 65.4 3.5E+02 0.0077 33.8 23.1 144 1783-1927 20-231 (326)
494 PF10214 Rrn6: RNA polymerase 65.1 5.6E+02 0.012 36.0 25.5 116 1824-1941 145-277 (765)
495 PF05935 Arylsulfotrans: Aryls 63.5 3.6E+02 0.0077 35.7 19.8 189 1796-1990 69-309 (477)
496 PF02333 Phytase: Phytase; In 63.3 4.3E+02 0.0094 34.1 24.4 194 1744-1948 66-299 (381)
497 PF14269 Arylsulfotran_2: Aryl 62.6 1.8E+02 0.0039 36.1 15.9 138 1842-1980 21-218 (299)
498 KOG4659|consensus 62.4 4.6E+02 0.01 38.2 20.2 36 1686-1721 341-383 (1899)
499 PF10433 MMS1_N: Mono-function 61.9 5E+02 0.011 34.3 31.5 281 1695-1982 46-388 (504)
500 KOG1898|consensus 61.9 2.7E+02 0.0058 39.6 18.0 132 1801-1939 910-1047(1205)
No 1
>KOG3613|consensus
Probab=100.00 E-value=2.8e-127 Score=1242.53 Aligned_cols=832 Identities=34% Similarity=0.482 Sum_probs=701.6
Q ss_pred eccccCcccccccceEEEEeeeechhhHHHHHHHHHHhhccChHHHHHHHhhcCCCCchHHHHHHHHHHhhhcCCccccc
Q psy8748 590 ATSSAGNSVESTHAHVLLYCGVYDSARTQYTLQTIRNMILPNSRAFLCAAATTALAPRSPILKLLARHRKCLFGRGFHGD 669 (2004)
Q Consensus 590 ~~~~~~~~~~~l~~H~LlY~~~yd~~r~l~a~~~l~~il~~~~~~f~~~~~tt~~~s~~~~~~Ll~rH~~~~~G~~F~g~ 669 (2004)
.+.+++. ++++.+|+++|.+.||+.|+||||.++++|++ |||.|+|++.+||+++.. |+||+.|||+++.||.|||+
T Consensus 700 ~q~~~l~-v~~l~~h~~~~l~~~~~~~~LyaF~~~r~il~-n~~l~~~l~~~ts~d~~s-l~~Ll~rh~~si~Gq~f~~~ 776 (1749)
T KOG3613|consen 700 MQKSLLM-VKELYTHVLYYLQKYDASRTLYAFVVLRGILC-NPRLFVLLVSETSRDSDS-LNNLLNRHRESILGQLFDSG 776 (1749)
T ss_pred hhhhHHH-HHHHhhhHHHHhhhhhhhhhHHHHHhhHhhhh-chHHHHHHhhhcccCcHH-HHHHHHHHHHhhccchhhcc
Confidence 3445555 99999999999999999999999999999999 999999999999997666 89999999999999999999
Q ss_pred cCCCCCCCCCCchHHHHHHHHHHHHHHhhccccCCCCCCHHHHhhchhhhhhhHHHHHHHHHHHHHHHHhcCCcchHHHH
Q psy8748 670 IESTGCTYSRSSMYLEVLISVCLYYIRSYYLNLGQTRLTLEEIAGNRQVQIASVELLSVILSELAGIVRDSGKGIDTYTT 749 (2004)
Q Consensus 670 ~~~~~~~~~~~~~~lEll~~~cL~f~rsyy~~~~~~~~s~~d~~~N~~vq~~s~E~l~~i~~eL~~~~~~~~~~~~~~i~ 749 (2004)
+. +.++.++++|+||+|+++||+|+|+||++. ++++|++|+.+||++|++++|+|+++|.||+.|++.++++|++||.
T Consensus 777 ~~-~~~~~~~~s~~LelLnsl~l~~lr~~~~~~-~l~~t~~dl~~~r~~q~~sIe~l~~l~~el~~v~k~~~~~~~~~i~ 854 (1749)
T KOG3613|consen 777 LP-STENLNKLSMILELLNSLCLSFLRSYYNMI-FLKVTAQDLLGNRKGQVESIEYLTLLFLELAYVLKSSNGKFVEFIS 854 (1749)
T ss_pred Cc-cchhccccchhhhHHHHHHHHHHHHhcccc-cccchHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhcCCcHHHHHH
Confidence 98 778999999999999999999999999942 8899999999999999999999999999999999999888999999
Q ss_pred HHhhhcchhhhhhh--ccccccccccccccCCCcccccccccCCCCCCCccchhhhcccCCCCCCCCcchhhHHHHHHHH
Q psy8748 750 YSKNLSLLQNISVF--VNPFSTDNSTSMMNNDFDDYFVEEKKDGTSTTSTELIDEDVKNNNSGGSGVSSQCLTLQIQLLK 827 (2004)
Q Consensus 750 ~ll~rckvQk~~l~--~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~LL~ 827 (2004)
++|.|||+||+++| ++|+++. ++ +++.+...++ ....+.++.+|-++....+ .+.+|.+||+
T Consensus 855 ~ll~r~K~qk~~l~~llss~~s~------~~-~~~~~~n~k~-------~~~~~~~~S~~l~~d~ql~--~~~~q~~Ll~ 918 (1749)
T KOG3613|consen 855 TLLCRIKLQKVILHSLLSSLCSL------QK-TLGLKDNIKS-------GTLAELILSINLGLDIQLN--EDSLQAELLF 918 (1749)
T ss_pred HHHHhhhhhHHHHHHHHHHHHHh------HH-HhccccccCC-------CccHHHHHhhchhhhhhhc--hhHHHHHHHH
Confidence 99999999999999 8888765 43 5665555553 3344555555544443322 3679999999
Q ss_pred HHHHHHhhcccccccCCCCCCCCCCCCC---C---CCCCCCCCCCCCCCCCCchhHHHHHHHhhccCCCCcchhhhHHHH
Q psy8748 828 LLLSALILEHEVNTKRGEVEPSPPSLSS---V---DLTGNDPKYYPGRIIPQQPMFLCALARALESNPGLRASHQHWTTM 901 (2004)
Q Consensus 828 ll~~~i~le~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~i~~~~~fl~~ll~gL~~~~~~~~~~~~W~~~ 901 (2004)
+++.+|+|||+++..+++.+.+.-.... + ...++..+|.+++++.+|+||+.++++||+++ +++|++|+.+
T Consensus 919 llq~~i~le~~v~~~~e~~~~~~~s~~~~~~~~~~~~~~~ld~~~~~~~~~~~~lfl~~vv~~L~~~---~~~h~~w~~l 995 (1749)
T KOG3613|consen 919 LLQIAIVLEHEVGRLPESRSNSFDSFVSDSLEMLHSGAIRLDQYDDPASILYQGLFLLAVVRALKDG---PGLHPMWLIL 995 (1749)
T ss_pred HHHHHHHHHHHhccccccccccHHHHHHHHHHhchhcCcchhhccCchHHHHHHHHHHHHHHhcccC---CCCCHHHHHH
Confidence 9999999999994433333211111111 1 15578889999999999999999999999888 4699999999
Q ss_pred hhhccccccchhhhHHHHHHHHHHHHHHHHHHHhccccccc----cCCCCChHHHHHHHHHHHHHHHhhhcCCCCCCCCC
Q psy8748 902 LTCALPYLGKSLTTVVKVAIKALCANVDYLAEVYSVQNENK----LKTNIPADYAITQMEALTILCHYCLLDSAQPFNQP 977 (2004)
Q Consensus 902 l~~~LP~~~~sl~~~v~~~v~qlC~~i~~l~~~~~~~~~~~----~~~~~p~~~~itlLegl~~i~H~~Ll~~~~~~~~~ 977 (2004)
|+++|||+|++|+++|+++|+|||||++.+.++|+. ++.+ .+..+|+||++++|||||+|+||||||+++++.+.
T Consensus 996 It~sLp~~~~sL~~~vv~~v~qLcknvd~l~~~~~~-~~~~~~~~~~~~~p~d~~l~~Le~Lt~i~h~cLld~t~q~~~~ 1074 (1749)
T KOG3613|consen 996 ITESLPYFGKSLQRIVVPVVVQLCKNVDRLKKQYES-EYGKSPDDPADYIPPDYLLTLLEGLTEIVHFCLLDDTQQFIHL 1074 (1749)
T ss_pred HHHHHHHHHhhhheeehhhHHHHHHHHHHHHHHHhh-ccCCCCCchhhhCChHHHHHHHHHHHHHHHHhhcccccccccc
Confidence 999999999999999999999999999999999864 4442 55669999999999999999999999999998665
Q ss_pred CCCccccccccccccccccccccCCCCCCccccceeeeecCCC-----CCcccccchhhhhhchhhhHHHHhhhHhHHhh
Q psy8748 978 LHGNVMYHVSEKYNKSLKDISSKANNVGKSGKKIVAVTSLSSG-----DNQCVTEKKRVNQNIYHDGIDTYTTYSKNLSL 1052 (2004)
Q Consensus 978 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~f~n~v~~~~~s~~-----~~~~~~~~~~vaR~~L~~i~~~~~~w~~~i~~ 1052 (2004)
+.+.....++.+ ...--+.|+|.|+++|++.+ .++...+.+..|+.++ ++++ |.+-..+
T Consensus 1075 ~~~~~p~~~~~a-----------~s~~~g~l~~sis~~~~s~s~~~~~ds~~r~~~l~~aq~a~----~ti~-~~~~~~~ 1138 (1749)
T KOG3613|consen 1075 NATPDPSSLSKA-----------RSELFGELINSISSVFLSWSSSNKLDSSEREDGLLIAQSAL----QTIL-LGTRSSY 1138 (1749)
T ss_pred ccCCCcchhhhh-----------hHHHHHHHHHHHHHHHHhhhhccccccccCcchhHHHHHHh----HHHH-HhcchHH
Confidence 521111111111 11134566677777666654 2333333444455444 2111 5555557
Q ss_pred hhhhhcccCccccccchhhhhccccccccccccCCCC----------ccc----------cccccCCcchHHHHHHHHHc
Q psy8748 1053 LQNISVFVNPFSTDNSTSMMNNDFDDYFVEEKKDGTS----------TTS----------TELIAMPIDTLVQTIHQVIR 1112 (2004)
Q Consensus 1053 ~~~il~~l~p~~~~~~~~~l~al~~~~~W~~~~~~~~----------~~s----------~~i~~l~~dti~~~~~~v~~ 1112 (2004)
||+++++++|++++|+..|++|+ |+||..||-..+ +++ +++.+||+|+.+.+++.+++
T Consensus 1139 r~~~l~~lsp~s~~l~~~flaa~--a~~w~~r~~~~~~~~l~i~~~~e~~~~ql~l~tlvss~~V~~~~~~~~tv~~~lk 1216 (1749)
T KOG3613|consen 1139 RQKLLEFLSPDSSHLGEAFLAAY--AFVWEERRLAETTTLLKIIELLEASNEQLDLVTLVSSLSVQPEEKLLSTVKHVLK 1216 (1749)
T ss_pred HHHhHHHhCchHHHHHHHHHHHH--HHHHHhccccccchhhhhhhHhhhhHHHHHHHHHHHhhcccccccceeeeHHHHh
Confidence 99999999999999999999999 999997663322 233 99999999999999999999
Q ss_pred CCCCCCC-C--CcccHHHHHHHHHHHHhhCCcchHHhHHHHHHHHHHhh--cCCCCchhHHHHHHHHHHhhcCCCCC-cc
Q psy8748 1113 STTINME-P--SMRMEVSVLELLLHYIQLTPSTALAESWPSLLLLLREG--PSLSPPSQFILMAILSQFVHRTSAPL-PD 1186 (2004)
Q Consensus 1113 ~~~~~~~-~--~~~~e~~Ll~FL~~Y~~sL~~~~l~eiW~~ll~flKdv--lsn~~p~~l~~l~IL~ekv~~t~f~~-Ed 1186 (2004)
.++++.+ + ...+|.++++|+++|+++++..++.++|.+++.|+||. +++++|++|.++.+|+++|.+++- . ||
T Consensus 1217 ~~~~i~~~~~~~~~~ei~~Le~~~~~~~~vp~~~l~~~~sSLl~~l~e~i~~sl~~~~~flll~~Lndfv~~~~~-~~e~ 1295 (1749)
T KOG3613|consen 1217 LPPAIERSDLAFFSTEIPFLELFYAFVSRVPVPNLRDSWSSLLALLRESIQLSLSAPAVFLLLSTLNDFVSKNPN-MYED 1295 (1749)
T ss_pred cCcccCccchhhcCccchHHHHHHHHhccCcchHHHHHHHHHHHHHHHhHhhccCchHHHHHHHHHHHHHhhCcC-cchh
Confidence 9999988 4 99999999999999999999999999999999999999 999999999999999999999994 5 99
Q ss_pred hhhhhhHHHHHHHHHHHHHhccccccccchhhhcccccccccccCCCCCCCcccccccccccc---cccccchhhHHHHH
Q psy8748 1187 RRDQKDLQDITAKLIESCAGIAGACLEQTTWLRRNLAVKEDELSNSSSDKDSDKCKFKHITVG---TTVAQHSVQALSVL 1263 (2004)
Q Consensus 1187 Kk~rKELqD~~~KlL~a~~~~~~~~leq~~w~~r~~~v~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~al~~L 1263 (2004)
||++|||||++.|+++++..++|+++||++|++|+++++.+.+..- .++..+....++. -.+++|+++|+.++
T Consensus 1296 kk~qrdlqdVt~kil~av~aiaG~sle~ttwl~r~l~vKa~v~dt~----~~~l~d~~~~s~~~~~k~~d~yS~qal~~l 1371 (1749)
T KOG3613|consen 1296 KKDQRDLQDVTSKILEAVGAIAGSSLEQTTWLDRNLEVKALVSDTF----FEDLPDAKSNSVYLLQKKLDVYSVQALFLL 1371 (1749)
T ss_pred hhhhhhHHHHHHHHHHHHHhhcccccchhhhhhcchhhhhhhcchh----hhhhhhhhhhhhHHhhcCCccchHHHHHHH
Confidence 9999999999999999999999999999999999998886422110 0011111111221 14569999999999
Q ss_pred HHHHhhhhcccccCCCchhHHHHHHhHhhhhhcccccccccccchhhHHHHHHHHhhhcCccccchHHHHHHhcCCCccc
Q psy8748 1264 AQLLAPLLDVTYGSQEKERVNTLLTTLMYNVIPYLKNHSQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALF 1343 (2004)
Q Consensus 1264 ~~l~~~l~~l~~~~~E~DRv~~~ls~I~~nviP~lK~k~~~n~~~~~~~~~LL~sLS~~~~~~KaWKk~V~DlFnD~~FF 1343 (2004)
++.++-+.|+.|.++|+||+.++++.|++||+||+|+|+++|+|.+.++++||.+||+|+|++|+|||+++|+|+|++||
T Consensus 1372 ae~l~~lld~~~~sDEk~kv~~lls~v~~~ItPylk~~sa~nap~~~a~~~LLasLSgy~y~rkaWrKe~~eLF~D~~fF 1451 (1749)
T KOG3613|consen 1372 AERLADLLDVVYRSDEKDKVVPLLSIVNYNITPYLKNHSARNAPLFRAGLQLLASLSGYQYTRKAWRKEFLELFLDNSFF 1451 (1749)
T ss_pred HHHHHHHHHHHhccchhhhhhhHHHHHHHhhhHHhccccccccchHHHHHHHHHHHhcCchhHHHHHHHHHHHhcCcchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccChhchhhHHHHHHHHHhcCCCcHHHHHhhcccCCCcccccccChHHHHHHHHHHHHHHHhhhhccCCchhhccChhHH
Q psy8748 1344 QMELRCLRAWKSIVDNLMSQEPATFRDLMTRVSLSQSNSLSLFSNKEQEYEQRAQLLKKLAFVILCSETDQFHKHIPEIT 1423 (2004)
Q Consensus 1344 ~~~~~~l~~W~~II~~w~~~DK~~f~DLL~Rit~~~Sss~~iFtn~e~E~e~Ra~~LKRLAfLIlsse~D~yl~~Lp~I~ 1423 (2004)
+|+.+|+++|++||++||+|||++|+|||.||+.++|++.++|+|+|+|+|+|||+||||||+||+||.|||+.|||+||
T Consensus 1452 qmd~s~l~~W~~Iid~lmt~d~t~f~DLm~ri~~s~s~s~~lftSrd~e~e~ra~~LkRiaf~ifsSp~Dqy~~~lp~iq 1531 (1749)
T KOG3613|consen 1452 QMDLSCLRHWSSIIDHLMTHDKTIFNDLMTRISSSQSGSLNLFTSRDQELEQRAMLLKRIAFLIFSSPLDQYLGYLPDIQ 1531 (1749)
T ss_pred eeeHHHHHHHHHHHHHHHhCCchHHHHHHHHhhcccccceeeeecchHHHHHHHHHHHhhHhheeeCcHHhhhhhchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh-hcCcccccchhhhHHHHHHhhccccccccCCCCCCCCCCceeehhhcc
Q psy8748 1424 GLTEGALI-ESCAGIAGACLEQTTWLRRNLAVKEDELSNSSSDKDSDKSFFFFFFFF 1479 (2004)
Q Consensus 1424 ekl~e~L~-~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1479 (2004)
|+|.++|+ ...+.|+++ +++|.|||.||= |.+|-.+=--.+.++++
T Consensus 1532 Erl~~~Lrv~~~~~lk~~----vFL~~RVLLLR~------Sp~hL~~LWPImv~ELv 1578 (1749)
T KOG3613|consen 1532 ERLADLLRVSQSPKLKKA----VFLFFRVLLLRI------SPDHLTSLWPIMVYELV 1578 (1749)
T ss_pred HHHHHhcccCCCchHHHH----HHHHHHHHHHhc------CHhhcccchHHHHHHHH
Confidence 99999999 445555554 469999999984 44444444445555443
No 2
>KOG0271|consensus
Probab=100.00 E-value=7.5e-42 Score=392.42 Aligned_cols=327 Identities=27% Similarity=0.448 Sum_probs=298.6
Q ss_pred CCCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCC
Q psy8748 1550 APEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKP 1629 (2004)
Q Consensus 1550 a~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~sp 1629 (2004)
+-.+|.+.|-|++|+|+|.+||| |+.|.|+|+||..+ .
T Consensus 110 S~~GH~e~Vl~~~fsp~g~~l~t-GsGD~TvR~WD~~T--------------------e--------------------- 147 (480)
T KOG0271|consen 110 SIAGHGEAVLSVQFSPTGSRLVT-GSGDTTVRLWDLDT--------------------E--------------------- 147 (480)
T ss_pred ccCCCCCcEEEEEecCCCceEEe-cCCCceEEeeccCC--------------------C---------------------
Confidence 34569999999999999999999 99999999999988 1
Q ss_pred CCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEE
Q psy8748 1630 TSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVS 1709 (2004)
Q Consensus 1630 dgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LAS 1709 (2004)
.|.++.+||...|.|++|+|||+.||+
T Consensus 148 -----------------------------------------------------Tp~~t~KgH~~WVlcvawsPDgk~iAS 174 (480)
T KOG0271|consen 148 -----------------------------------------------------TPLFTCKGHKNWVLCVAWSPDGKKIAS 174 (480)
T ss_pred -----------------------------------------------------CcceeecCCccEEEEEEECCCcchhhc
Confidence 135677899999999999999999999
Q ss_pred EeCCCeEEEEECCCCceE-EEeeCCCCceEEEEEec-----CCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCcc
Q psy8748 1710 GSLDGKLIIWDTWTGNKT-QVIPLRSAWVMSVAFAQ-----SGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEG 1783 (2004)
Q Consensus 1710 GS~DGtIrVWDl~Tgk~l-~ti~~Ht~~ItsLafSP-----dg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~ 1783 (2004)
|+.||.|++||.++|+.+ ..+.+|..+|++++|.| ..+++++++.||.|+|||+.. ......+.+|..
T Consensus 175 G~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~------~~~~~~lsgHT~ 248 (480)
T KOG0271|consen 175 GSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKL------GTCVRTLSGHTA 248 (480)
T ss_pred cccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccC------ceEEEEeccCcc
Confidence 999999999999998765 56899999999999976 467999999999999999974 467889999999
Q ss_pred ceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEEC-----------CCCC---------------
Q psy8748 1784 FLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLS-----------PDGQ--------------- 1837 (2004)
Q Consensus 1784 ~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafS-----------Pdg~--------------- 1837 (2004)
.|+|+.|..++.+++|+.|++|++|+...|... +.+.+|...|..++.+ |.++
T Consensus 249 ~VTCvrwGG~gliySgS~DrtIkvw~a~dG~~~-r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~r 327 (480)
T KOG0271|consen 249 SVTCVRWGGEGLIYSGSQDRTIKVWRALDGKLC-RELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALER 327 (480)
T ss_pred ceEEEEEcCCceEEecCCCceEEEEEccchhHH-HhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHH
Confidence 999999999999999999999999999998877 5568999999998876 2233
Q ss_pred ----------EEEEEECCCeEEEEECCC-CeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcC
Q psy8748 1838 ----------YFVTGSVDKSCKLWDFRE-KKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLP 1906 (2004)
Q Consensus 1838 ----------~LaSGS~DGsIrIWDlrs-~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~ 1906 (2004)
.+++|++|+++.+|+... .+++....+|..-|+.+.|+||++++++++.|..|++||.++|+.+..+
T Consensus 328 Y~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasf-- 405 (480)
T KOG0271|consen 328 YEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASF-- 405 (480)
T ss_pred HHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhh--
Confidence 499999999999999764 4578888999999999999999999999999999999999999999988
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Q psy8748 1907 PNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQ 1980 (2004)
Q Consensus 1907 ~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWd 1980 (2004)
.+|-..|..++|+.|.++|++|+.|.++++||+++.+....+.+|.+.|.++.|+|||..+++|+.|..+++|.
T Consensus 406 RGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 406 RGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred hhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999995
No 3
>KOG0286|consensus
Probab=100.00 E-value=1.4e-40 Score=373.36 Aligned_cols=340 Identities=51% Similarity=0.919 Sum_probs=323.5
Q ss_pred hHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEE
Q psy8748 1640 QTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIW 1719 (2004)
Q Consensus 1640 ~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVW 1719 (2004)
+.++++.+..++..++.+.+....+..+...........++.+...++|+||.+.|.++.|++|++++++++.||.+.||
T Consensus 3 ~~~~l~~Eae~L~~qi~~~r~~~~D~~l~q~a~~~~~~~~i~~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvW 82 (343)
T KOG0286|consen 3 ELEQLRQEAEQLKNQIRDARKKLNDVTLAQIAERLESVGRIQMRTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVW 82 (343)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccHHHHhhccccceeeeeeeEEEecccccceeeeEecCCcCeEEeeccCCeEEEE
Confidence 34677888888999998888888888888888888888888999999999999999999999999999999999999999
Q ss_pred ECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEe
Q psy8748 1720 DTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTG 1799 (2004)
Q Consensus 1720 Dl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSg 1799 (2004)
|..+..+.+.++....+|..++|+|.|+++++|+-|+...||++...+........+.+.+|.+.+.++.|.+++.++++
T Consensus 83 Ds~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT~ 162 (343)
T KOG0286|consen 83 DSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILTG 162 (343)
T ss_pred EcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCCCceEec
Confidence 99999999999999999999999999999999999999999999977666677888899999999999999999999999
Q ss_pred ecCCeEEEEECCCCceeEEeeccccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCC
Q psy8748 1800 SGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP-DGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSG 1878 (2004)
Q Consensus 1800 S~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP-dg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg 1878 (2004)
+.|.+..+||+++++.. ..+.+|.+.|.+++++| +++.|++|+.|+..++||++.+.++++|.+|+..|++++|.|+|
T Consensus 163 SGD~TCalWDie~g~~~-~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G 241 (343)
T KOG0286|consen 163 SGDMTCALWDIETGQQT-QVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSG 241 (343)
T ss_pred CCCceEEEEEcccceEE-EEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCC
Confidence 99999999999999988 45579999999999999 99999999999999999999999999999999999999999999
Q ss_pred CEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEE
Q psy8748 1879 LAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSI 1958 (2004)
Q Consensus 1879 ~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsL 1958 (2004)
.-|++|+.|++.++||++..+.+..+.......+|++++|+..|++|++|..|.++.+||.-+++.+..+.+|.++|+++
T Consensus 242 ~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl 321 (343)
T KOG0286|consen 242 DAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCL 321 (343)
T ss_pred CeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEE
Confidence 99999999999999999999999999888888999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCEEEEEECCCeEEEEE
Q psy8748 1959 SLSPNGMALVTSSWDQFVKVWQ 1980 (2004)
Q Consensus 1959 aFSPDg~~LaSgS~DGtIrIWd 1980 (2004)
..+|||..+++|++|.+++||.
T Consensus 322 ~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 322 GVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred EECCCCcEEEecchhHheeecC
Confidence 9999999999999999999994
No 4
>KOG0271|consensus
Probab=100.00 E-value=3.1e-38 Score=362.73 Aligned_cols=310 Identities=24% Similarity=0.364 Sum_probs=278.4
Q ss_pred cccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEE
Q psy8748 1683 MPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYD 1762 (2004)
Q Consensus 1683 ~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWD 1762 (2004)
++...+.||.++|.|++|+|+|..|++|+.|.++++||+.+.....+.++|..+|.|++|+|||+.|++|+.||.|++||
T Consensus 106 rCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwd 185 (480)
T KOG0271|consen 106 RCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWD 185 (480)
T ss_pred eeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEec
Confidence 45668999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcceEEEEEecCccceeeeEEeC------CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCC
Q psy8748 1763 LNNRDSTGAAKVIRELLGYEGFLSSCRFID------DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDG 1836 (2004)
Q Consensus 1763 l~t~~~~~~~k~i~sl~gh~~~Vssvafsd------d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg 1836 (2004)
..+++ ...+.+.+|...|++++|.+ ..++++++.||.|+|||+..+.++ ....+|..+|+|+.|--+
T Consensus 186 pktg~-----~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~-~~lsgHT~~VTCvrwGG~- 258 (480)
T KOG0271|consen 186 PKTGQ-----QIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCV-RTLSGHTASVTCVRWGGE- 258 (480)
T ss_pred CCCCC-----cccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEE-EEeccCccceEEEEEcCC-
Confidence 98764 55678899999999999973 346999999999999999998887 445799999999999744
Q ss_pred CEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEe-----------CCC-------------------------CE
Q psy8748 1837 QYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFH-----------PSG-------------------------LA 1880 (2004)
Q Consensus 1837 ~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafS-----------Pdg-------------------------~~ 1880 (2004)
.++++|+.|++|++|+...|.+.+.+++|...|+.++.+ |.+ ..
T Consensus 259 gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~er 338 (480)
T KOG0271|consen 259 GLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGER 338 (480)
T ss_pred ceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcce
Confidence 489999999999999999999999999999999999876 223 34
Q ss_pred EEEEECCCeEEEEEccCCc-eeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEE
Q psy8748 1881 FATGSEDKTARLFDIRADQ-QIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSIS 1959 (2004)
Q Consensus 1881 LaSgS~DGtIrIWDLrtgk-~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLa 1959 (2004)
+++|+.|+++.+|+-...+ ++... .+|..-|..+.|+||+++||+++.|..|++||.++|+.+..+++|-+.|..++
T Consensus 339 lVSgsDd~tlflW~p~~~kkpi~rm--tgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqva 416 (480)
T KOG0271|consen 339 LVSGSDDFTLFLWNPFKSKKPITRM--TGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVA 416 (480)
T ss_pred eEEecCCceEEEecccccccchhhh--hchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEE
Confidence 9999999999999976544 33333 46678899999999999999999999999999999999999999999999999
Q ss_pred EcCCCCEEEEEECCCeEEEEECCCCeEEEEEEeecCCCCcccccC
Q psy8748 1960 LSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCVN 2004 (2004)
Q Consensus 1960 FSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik~~~~h~~~VtsVN 2004 (2004)
|+.|.++|++|+.|.++++|++.+.+ ...-..+|...|++||
T Consensus 417 wsaDsRLlVS~SkDsTLKvw~V~tkK---l~~DLpGh~DEVf~vD 458 (480)
T KOG0271|consen 417 WSADSRLLVSGSKDSTLKVWDVRTKK---LKQDLPGHADEVFAVD 458 (480)
T ss_pred eccCccEEEEcCCCceEEEEEeeeee---ecccCCCCCceEEEEE
Confidence 99999999999999999999999964 3455557888898876
No 5
>KOG0318|consensus
Probab=100.00 E-value=6.8e-35 Score=346.10 Aligned_cols=428 Identities=17% Similarity=0.232 Sum_probs=307.5
Q ss_pred CCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCc
Q psy8748 1553 PCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSS 1632 (2004)
Q Consensus 1553 ~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgS 1632 (2004)
.|..+++-..|||.|.|+|+ |...|+|||||...-+.++ -..+..+.|....+.. ...-+++....+|.
T Consensus 57 EH~~~vtVAkySPsG~yiAS-GD~sG~vRIWdtt~~~hiL--------Knef~v~aG~I~Di~W--d~ds~RI~avGEGr 125 (603)
T KOG0318|consen 57 EHAHQVTVAKYSPSGFYIAS-GDVSGKVRIWDTTQKEHIL--------KNEFQVLAGPIKDISW--DFDSKRIAAVGEGR 125 (603)
T ss_pred cccceeEEEEeCCCceEEee-cCCcCcEEEEeccCcceee--------eeeeeeccccccccee--CCCCcEEEEEecCc
Confidence 36678999999999999999 9999999999997733333 2233333332222221 11111111111110
Q ss_pred c-hhhhhHhH-----HHHHHHHHHHH-HHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCC
Q psy8748 1633 I-NIYLKLQT-----AELKKELTQLI-DKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSR 1705 (2004)
Q Consensus 1633 i-di~i~~~~-----~ql~k~i~ql~-s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~ 1705 (2004)
- .+.+..|. .++..+-..+- -.++..+.-+..+..++.......++.+ +-..+++.|..-|+|+.|+|||.
T Consensus 126 erfg~~F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPF--KFk~s~r~HskFV~~VRysPDG~ 203 (603)
T KOG0318|consen 126 ERFGHVFLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPF--KFKSSFREHSKFVNCVRYSPDGS 203 (603)
T ss_pred cceeEEEEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCe--eeeecccccccceeeEEECCCCC
Confidence 0 00000000 00000000000 0000011111111122222222333333 34568899999999999999999
Q ss_pred EEEEEeCCCeEEEEECCCCceEEEee---CCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecC-
Q psy8748 1706 HCVSGSLDGKLIIWDTWTGNKTQVIP---LRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGY- 1781 (2004)
Q Consensus 1706 ~LASGS~DGtIrVWDl~Tgk~l~ti~---~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh- 1781 (2004)
++|++|.||+|.+||-.+|+.+..+. +|.+.|.++.|+||+..+++++.|.++++||+.+.. ..+++...
T Consensus 204 ~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~s------lv~t~~~~~ 277 (603)
T KOG0318|consen 204 RFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNS------LVSTWPMGS 277 (603)
T ss_pred eEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccc------eEEEeecCC
Confidence 99999999999999999999999997 899999999999999999999999999999998753 33333322
Q ss_pred --ccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEE
Q psy8748 1782 --EGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCV 1859 (2004)
Q Consensus 1782 --~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I 1859 (2004)
.+....+.|. ++.+++.+.+|.|.+++...+.. .....+|...|+++..++++++|++|+.||.|.-||..++..-
T Consensus 278 ~v~dqqvG~lWq-kd~lItVSl~G~in~ln~~d~~~-~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~ 355 (603)
T KOG0318|consen 278 TVEDQQVGCLWQ-KDHLITVSLSGTINYLNPSDPSV-LKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSD 355 (603)
T ss_pred chhceEEEEEEe-CCeEEEEEcCcEEEEecccCCCh-hheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCcccc
Confidence 2233445555 77899999999999999999984 4677899999999999999999999999999999997643210
Q ss_pred -----------EEEe--------------------------------------------------------------c--
Q psy8748 1860 -----------QTFF--------------------------------------------------------------G-- 1864 (2004)
Q Consensus 1860 -----------~tl~--------------------------------------------------------------~-- 1864 (2004)
..+. .
T Consensus 356 ~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~ 435 (603)
T KOG0318|consen 356 RLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQT 435 (603)
T ss_pred ccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCC
Confidence 0000 0
Q ss_pred ------CCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy8748 1865 ------HEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWD 1938 (2004)
Q Consensus 1865 ------h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWD 1938 (2004)
......+++++|+++.+++|+.||+|++|.+..+..........|..++++++++||+.|||+|+..+.+.+||
T Consensus 436 ~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd 515 (603)
T KOG0318|consen 436 KVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYD 515 (603)
T ss_pred cceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEE
Confidence 01124568899999999999999999999998776555545567889999999999999999999999999999
Q ss_pred CCCCeeeEE-EccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEEeecCCCCccccc
Q psy8748 1939 LLKTTHNGV-LSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003 (2004)
Q Consensus 1939 L~tge~l~t-L~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik~~~~h~~~VtsV 2003 (2004)
+.+.+.... +.-|..+|.+++|+|+..++|+|+-|-.|.||+++.... .+....+|..+|+.+
T Consensus 516 ~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~--~i~iknAH~~gVn~v 579 (603)
T KOG0318|consen 516 VASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAK--HIIIKNAHLGGVNSV 579 (603)
T ss_pred cccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhh--heEeccccccCceeE
Confidence 988877433 345999999999999999999999999999999998754 366678898887764
No 6
>KOG0272|consensus
Probab=100.00 E-value=3.2e-35 Score=342.68 Aligned_cols=283 Identities=29% Similarity=0.496 Sum_probs=266.0
Q ss_pred cccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecC--CCEEEEeecCCeEEEEEcCCC
Q psy8748 1689 KGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQS--GNFVACGGMDNMCTVYDLNNR 1766 (2004)
Q Consensus 1689 ~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPd--g~~LaSGS~DGtIrVWDl~t~ 1766 (2004)
-|-+.+|..+.||.|++.||||+.+|.++||+..+...+.++.+|.+.|.++.|+|. +..+++|+.||++++|++++.
T Consensus 172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e 251 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQE 251 (459)
T ss_pred ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCC
Confidence 456789999999999999999999999999999999999999999999999999996 669999999999999999753
Q ss_pred CCCCcceEEEEEecCccceeeeEEeCCC-cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECC
Q psy8748 1767 DSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVD 1845 (2004)
Q Consensus 1767 ~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~D 1845 (2004)
..+..+.+|...|..++|++++ ++.+++.|.+-++||++++..+ ....+|...|.+++|++||..+++||.|
T Consensus 252 ------~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~El-L~QEGHs~~v~~iaf~~DGSL~~tGGlD 324 (459)
T KOG0272|consen 252 ------TPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSEL-LLQEGHSKGVFSIAFQPDGSLAATGGLD 324 (459)
T ss_pred ------cchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhh-HhhcccccccceeEecCCCceeeccCcc
Confidence 5677889999999999999655 5889999999999999999876 3457999999999999999999999999
Q ss_pred CeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcC-CCCE
Q psy8748 1846 KSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSS-SGRY 1924 (2004)
Q Consensus 1846 GsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSP-dG~~ 1924 (2004)
..-+|||++++.++..+.+|..+|.+++|+|+|..+++|+.|++++|||++..+...++ +.|..-|+.+.|+| .|.+
T Consensus 325 ~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~i--pAH~nlVS~Vk~~p~~g~f 402 (459)
T KOG0272|consen 325 SLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTI--PAHSNLVSQVKYSPQEGYF 402 (459)
T ss_pred chhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceec--ccccchhhheEecccCCeE
Confidence 99999999999999999999999999999999999999999999999999988886666 67888999999999 7899
Q ss_pred EEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Q psy8748 1925 IFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQ 1980 (2004)
Q Consensus 1925 LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWd 1980 (2004)
|++++.|++++||...++.+++.+.||.+.|.++++++|+.+++|++.|+++++|.
T Consensus 403 L~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 403 LVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 99999999999999999999999999999999999999999999999999999995
No 7
>KOG0272|consensus
Probab=100.00 E-value=5.7e-33 Score=324.05 Aligned_cols=279 Identities=26% Similarity=0.397 Sum_probs=256.6
Q ss_pred CCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCcchh
Q psy8748 1556 EQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSSINI 1635 (2004)
Q Consensus 1556 ~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgSidi 1635 (2004)
.+|..+.||+|++.||| |+.+|.++||+... +
T Consensus 176 rPis~~~fS~ds~~laT-~swsG~~kvW~~~~-------------~---------------------------------- 207 (459)
T KOG0272|consen 176 RPISGCSFSRDSKHLAT-GSWSGLVKVWSVPQ-------------C---------------------------------- 207 (459)
T ss_pred CcceeeEeecCCCeEEE-eecCCceeEeecCC-------------c----------------------------------
Confidence 36999999999999999 99999999999877 0
Q ss_pred hhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCC--CCEEEEEeCC
Q psy8748 1636 YLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGD--SRHCVSGSLD 1713 (2004)
Q Consensus 1636 ~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPD--G~~LASGS~D 1713 (2004)
..+.+|.||++.|.++.|+|. +..+|||+.|
T Consensus 208 -----------------------------------------------~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~D 240 (459)
T KOG0272|consen 208 -----------------------------------------------NLLQTLRGHTSRVGAAVFHPVDSDLNLATASAD 240 (459)
T ss_pred -----------------------------------------------ceeEEEeccccceeeEEEccCCCccceeeeccC
Confidence 024568899999999999996 5689999999
Q ss_pred CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCC
Q psy8748 1714 GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD 1793 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd 1793 (2004)
|++++|++.+...+..+.+|...|..++|+|+|++|++++.|.+-++||+.++ .......||...|.+++|..+
T Consensus 241 gtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk------~ElL~QEGHs~~v~~iaf~~D 314 (459)
T KOG0272|consen 241 GTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETK------SELLLQEGHSKGVFSIAFQPD 314 (459)
T ss_pred CceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccc------hhhHhhcccccccceeEecCC
Confidence 99999999999999999999999999999999999999999999999999865 344556799999999999855
Q ss_pred -CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEE
Q psy8748 1794 -TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSV 1872 (2004)
Q Consensus 1794 -~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsI 1872 (2004)
..+++|+.|..-++||+++|.++ -++.+|..+|.+++|+|+|..+++|+.|++++|||++....+.++.+|..-|+.+
T Consensus 315 GSL~~tGGlD~~~RvWDlRtgr~i-m~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~V 393 (459)
T KOG0272|consen 315 GSLAATGGLDSLGRVWDLRTGRCI-MFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQV 393 (459)
T ss_pred CceeeccCccchhheeecccCcEE-EEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhhe
Confidence 55778999999999999999998 4567899999999999999999999999999999999999999999999999999
Q ss_pred EEeC-CCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy8748 1873 CFHP-SGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWD 1938 (2004)
Q Consensus 1873 afSP-dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWD 1938 (2004)
+|+| .|.+|++++.|+++++|..+++.++..+ .+|.+.|.++.+++++.++++++.|.++++|.
T Consensus 394 k~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksL--aGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 394 KYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSL--AGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EecccCCeEEEEcccCcceeeecCCCcccchhh--cCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 9999 7889999999999999999999999888 57778999999999999999999999999995
No 8
>KOG0319|consensus
Probab=100.00 E-value=1.1e-31 Score=329.10 Aligned_cols=393 Identities=22% Similarity=0.324 Sum_probs=304.4
Q ss_pred CCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeeccccccccc-ccCccccc-cccCCC
Q psy8748 1553 PCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMS-QEPATFRD-LMMKPT 1630 (2004)
Q Consensus 1553 ~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s-~~~~~f~~-ll~spd 1630 (2004)
.|..+|--|+|+|.|..||+ |+.||.++|||+.. +.+...++|+..-+.. .+.+.+.. ++. .
T Consensus 103 ~He~Pvi~ma~~~~g~LlAt-ggaD~~v~VWdi~~-------------~~~th~fkG~gGvVssl~F~~~~~~~lL~--s 166 (775)
T KOG0319|consen 103 IHEAPVITMAFDPTGTLLAT-GGADGRVKVWDIKN-------------GYCTHSFKGHGGVVSSLLFHPHWNRWLLA--S 166 (775)
T ss_pred ccCCCeEEEEEcCCCceEEe-ccccceEEEEEeeC-------------CEEEEEecCCCceEEEEEeCCccchhhee--e
Confidence 38999999999999999999 99999999999998 7777778776553333 01111101 001 1
Q ss_pred CcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEE
Q psy8748 1631 SSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSG 1710 (2004)
Q Consensus 1631 gSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASG 1710 (2004)
+..+..++.|+ ... +-.+.+.+.+|...|++++|++|+.-++++
T Consensus 167 g~~D~~v~vwn-----------------------------------l~~-~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~ 210 (775)
T KOG0319|consen 167 GATDGTVRVWN-----------------------------------LND-KRTCLHTMILHKSAVTSLAFSEDSLELLSV 210 (775)
T ss_pred cCCCceEEEEE-----------------------------------ccc-CchHHHHHHhhhhheeeeeeccCCceEEEe
Confidence 11111111110 000 011577889999999999999999999999
Q ss_pred eCCCeEEEEECCCCceEEEeeCCCCceEEEEEecC-----CCEEEEeecCCeEEEEEcCCCCCCC---------------
Q psy8748 1711 SLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQS-----GNFVACGGMDNMCTVYDLNNRDSTG--------------- 1770 (2004)
Q Consensus 1711 S~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPd-----g~~LaSGS~DGtIrVWDl~t~~~~~--------------- 1770 (2004)
|.|..+.|||+.+.+...+.+.. ..+-++.+-++ +.+++++|.+|.+++||.+++....
T Consensus 211 ~RDkvi~vwd~~~~~~l~~lp~y-e~~E~vv~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~ 289 (775)
T KOG0319|consen 211 GRDKVIIVWDLVQYKKLKTLPLY-ESLESVVRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLA 289 (775)
T ss_pred ccCcEEEEeehhhhhhhheechh-hheeeEEEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhccee
Confidence 99999999999777776666533 33666666665 6688888888888888876432100
Q ss_pred ----------------------c------------------------------------------ceEEEEEecCcccee
Q psy8748 1771 ----------------------A------------------------------------------AKVIRELLGYEGFLS 1786 (2004)
Q Consensus 1771 ----------------------~------------------------------------------~k~i~sl~gh~~~Vs 1786 (2004)
. ......+.+|...+.
T Consensus 290 ~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vl 369 (775)
T KOG0319|consen 290 IESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVL 369 (775)
T ss_pred ccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhhee
Confidence 0 000123456777777
Q ss_pred eeE-EeCCCcEEEeecCCeEEEEECCCCcee---EEeeccccCCeEEEEECCCC-CEEEEEECCCeEEEEECCCCeE---
Q psy8748 1787 SCR-FIDDTTLLTGSGDMKIVTWNLETGQRI---HEVAQAHIGDVVSISLSPDG-QYFVTGSVDKSCKLWDFREKKC--- 1858 (2004)
Q Consensus 1787 sva-fsdd~~LlSgS~DGtI~IWDl~tg~~i---~~il~~h~~~ItsLafSPdg-~~LaSGS~DGsIrIWDlrs~k~--- 1858 (2004)
++. |..+..+++|+.|.++++|.++.+... .....+|...|.+++++..+ .+|++++.|+++++|++...+.
T Consensus 370 SL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~ 449 (775)
T KOG0319|consen 370 SLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAF 449 (775)
T ss_pred eeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccc
Confidence 776 445557999999999999988544322 23356899999999997754 4899999999999999976221
Q ss_pred --EE----EEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCC
Q psy8748 1859 --VQ----TFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDN 1932 (2004)
Q Consensus 1859 --I~----tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDG 1932 (2004)
+. +...|...|+|++++|+.+.+++||.|.+.++|++.......++ .+|..++.++.|++..+.+++++.|+
T Consensus 450 ~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vL--sGH~RGvw~V~Fs~~dq~laT~SgD~ 527 (775)
T KOG0319|consen 450 PIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVL--SGHTRGVWCVSFSKNDQLLATCSGDK 527 (775)
T ss_pred cceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEe--eCCccceEEEEeccccceeEeccCCc
Confidence 11 23479999999999999999999999999999999988888777 57888999999999999999999999
Q ss_pred eEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEEeecCCCCccccc
Q psy8748 1933 NVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003 (2004)
Q Consensus 1933 sIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik~~~~h~~~VtsV 2003 (2004)
+|+||.+.+..+++++.||...|..+.|-.+|..|+||+.||-|++|+++++. ++++++.|...|+.+
T Consensus 528 TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~e---C~~tlD~H~DrvWaL 595 (775)
T KOG0319|consen 528 TVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNE---CEMTLDAHNDRVWAL 595 (775)
T ss_pred eEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchh---hhhhhhhccceeEEE
Confidence 99999999999999999999999999999999999999999999999999984 577788898888764
No 9
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=1.7e-30 Score=293.18 Aligned_cols=287 Identities=35% Similarity=0.617 Sum_probs=256.4
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcC
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLN 1764 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~ 1764 (2004)
.+.+++|.++|++++|+|+++++++++.||.|++|++.+++....+..|...+..+.|+++++.+++++.+|.|++|++.
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~ 81 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLE 81 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcC
Confidence 45678999999999999999999999999999999999998888889999999999999999999999999999999997
Q ss_pred CCCCCCcceEEEEEecCccceeeeEEeCCCcEEE-eecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEE
Q psy8748 1765 NRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLT-GSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGS 1843 (2004)
Q Consensus 1765 t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlS-gS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS 1843 (2004)
.+ .....+..+...+.++.|.+++.+++ ++.+|.|.+||+.+++....+ ..|...+.+++|+|++.++++++
T Consensus 82 ~~------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~ 154 (289)
T cd00200 82 TG------ECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTL-RGHTDWVNSVAFSPDGTFVASSS 154 (289)
T ss_pred cc------cceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEe-ccCCCcEEEEEEcCcCCEEEEEc
Confidence 54 34455667788899999997755554 555999999999987766444 47888999999999999988888
Q ss_pred CCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCC
Q psy8748 1844 VDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGR 1923 (2004)
Q Consensus 1844 ~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~ 1923 (2004)
.||.|++||++.++.+..+..|...+.+++|+|+++.+++++.||.|++||+++++....+. .+...+.+++|++++.
T Consensus 155 ~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~~~~~~ 232 (289)
T cd00200 155 QDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLR--GHENGVNSVAFSPDGY 232 (289)
T ss_pred CCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchh--hcCCceEEEEEcCCCc
Confidence 89999999999888888888999999999999999999999999999999999887776663 4456899999999999
Q ss_pred EEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Q psy8748 1924 YIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQ 1980 (2004)
Q Consensus 1924 ~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWd 1980 (2004)
++++++.||.|++||+.+++....+.+|...|.+++|++++.++++++.||.|++|+
T Consensus 233 ~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 233 LLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 999988899999999999999999999999999999999999999999999999996
No 10
>KOG0273|consensus
Probab=100.00 E-value=7.8e-31 Score=309.06 Aligned_cols=280 Identities=22% Similarity=0.377 Sum_probs=256.0
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCc
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGA 1771 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~ 1771 (2004)
...|++++|+.+|..||+|+.||.+++|+ .+|..+.++..|.++|.++.|+.+|++|++++.||++.+||..++
T Consensus 235 nkdVT~L~Wn~~G~~LatG~~~G~~riw~-~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g----- 308 (524)
T KOG0273|consen 235 NKDVTSLDWNNDGTLLATGSEDGEARIWN-KDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTG----- 308 (524)
T ss_pred cCCcceEEecCCCCeEEEeecCcEEEEEe-cCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCc-----
Confidence 46899999999999999999999999999 588899999999999999999999999999999999999998754
Q ss_pred ceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy8748 1772 AKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLW 1851 (2004)
Q Consensus 1772 ~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIW 1851 (2004)
.....+.-|......+.|.++..|++++.||.|+++.+.....+.++ .+|.++|.++.|+|.|.+|++++.|++++||
T Consensus 309 -~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~-~GH~g~V~alk~n~tg~LLaS~SdD~TlkiW 386 (524)
T KOG0273|consen 309 -TVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTF-IGHHGEVNALKWNPTGSLLASCSDDGTLKIW 386 (524)
T ss_pred -eEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceee-ecccCceEEEEECCCCceEEEecCCCeeEee
Confidence 44555556666667889999999999999999999999888877555 5699999999999999999999999999999
Q ss_pred ECCCCeEEEEEecCCCCeEEEEEeCCC---------CEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCC
Q psy8748 1852 DFREKKCVQTFFGHEADVNSVCFHPSG---------LAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSG 1922 (2004)
Q Consensus 1852 Dlrs~k~I~tl~~h~s~ItsIafSPdg---------~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG 1922 (2004)
..........+.+|...|..+.|+|+| ..+++++.|++|++||+..+.++..+. .|..+|.+++|+|+|
T Consensus 387 s~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~--kH~~pVysvafS~~g 464 (524)
T KOG0273|consen 387 SMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLM--KHQEPVYSVAFSPNG 464 (524)
T ss_pred ecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeec--cCCCceEEEEecCCC
Confidence 999999999999999999999999965 468999999999999999999999984 566899999999999
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1923 RYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1923 ~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
+|+|+|+.||.|.+|+.++++..+.+.+ .+.|..++|+.+|..|..+-.||.+++-|+.
T Consensus 465 ~ylAsGs~dg~V~iws~~~~~l~~s~~~-~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 465 RYLASGSLDGCVHIWSTKTGKLVKSYQG-TGGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred cEEEecCCCCeeEeccccchheeEeecC-CCeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 9999999999999999999999999875 5569999999999999999999999998874
No 11
>KOG0291|consensus
Probab=99.98 E-value=2.7e-30 Score=316.16 Aligned_cols=302 Identities=19% Similarity=0.350 Sum_probs=264.0
Q ss_pred cccccccccccceeEEEEeCCCCEEEEEeCC-CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEE
Q psy8748 1683 MPKKSLKGHINKVNSVHYSGDSRHCVSGSLD-GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVY 1761 (2004)
Q Consensus 1683 ~pi~sL~GHt~~VtsLaFSPDG~~LASGS~D-GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVW 1761 (2004)
..++.|.--..+|..++|+..|.+||.|+.. |.+-||++.+...+...++|...+.+++++|||+++++|+.||.|+||
T Consensus 298 ~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvW 377 (893)
T KOG0291|consen 298 NLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVW 377 (893)
T ss_pred eEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEE
Confidence 3455555566789999999999999998875 899999999999999999999999999999999999999999999999
Q ss_pred EcCCCCCCCcceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEE
Q psy8748 1762 DLNNRDSTGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFV 1840 (2004)
Q Consensus 1762 Dl~t~~~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~La 1840 (2004)
|... .-+..++..|...++.+.|. .++.+++.+-||+|+.||+.......++.....-...|++..|.|..++
T Consensus 378 n~~S------gfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~ 451 (893)
T KOG0291|consen 378 NTQS------GFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVC 451 (893)
T ss_pred eccC------ceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEE
Confidence 9974 36888999999999999999 5566899999999999999999888777666777789999999999999
Q ss_pred EEECCC-eEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCc-eeEEEcCCCCCCCeEEEEE
Q psy8748 1841 TGSVDK-SCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQ-QIATYLPPNKNSGFTSCAV 1918 (2004)
Q Consensus 1841 SGS~DG-sIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk-~i~t~~~~~~~s~ItsLaf 1918 (2004)
+|+.|. .|++|++.+|+.+..+.+|+++|.+++|+|.++.+++++.|.+|++||+-... ...++ .....+..++|
T Consensus 452 AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl---~i~sdvl~vsf 528 (893)
T KOG0291|consen 452 AGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETL---EIRSDVLAVSF 528 (893)
T ss_pred eeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeE---eeccceeEEEE
Confidence 998886 59999999999999999999999999999999999999999999999986442 33333 33456899999
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCeeeEEEcc--------------------CCCCeEEEEEcCCCCEEEEEECCCeEEE
Q psy8748 1919 SSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSG--------------------HENRVTSISLSPNGMALVTSSWDQFVKV 1978 (2004)
Q Consensus 1919 SPdG~~LaSGSsDGsIrIWDL~tge~l~tL~g--------------------Hs~~VtsLaFSPDg~~LaSgS~DGtIrI 1978 (2004)
.|+|+.+++++-||.|.+||...+.....+.+ .....+.+++++||.++++||..+.|++
T Consensus 529 rPdG~elaVaTldgqItf~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCi 608 (893)
T KOG0291|consen 529 RPDGKELAVATLDGQITFFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICI 608 (893)
T ss_pred cCCCCeEEEEEecceEEEEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEE
Confidence 99999999999999999999987666644432 2356899999999999999999999999
Q ss_pred EECCCCeEEEEEEee
Q psy8748 1979 WQESNTIVWKVLKVY 1993 (2004)
Q Consensus 1979 Wdlstg~l~k~Ik~~ 1993 (2004)
|++.++..++..+.-
T Consensus 609 Y~v~~~vllkkfqiS 623 (893)
T KOG0291|consen 609 YDVPEGVLLKKFQIS 623 (893)
T ss_pred EECchhheeeeEEec
Confidence 999999777666643
No 12
>KOG0291|consensus
Probab=99.98 E-value=7.9e-30 Score=312.04 Aligned_cols=300 Identities=25% Similarity=0.439 Sum_probs=249.7
Q ss_pred cccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCce--EEEeeCCCCceEEEEEecCCCEEEEeecCCeEEE
Q psy8748 1683 MPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNK--TQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTV 1760 (2004)
Q Consensus 1683 ~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~--l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrV 1760 (2004)
...+++.||-+.|.++.|+.|.++|++|+.|.++++|++...+. ...+.+|.++|.+.-|..+...+++.+.||.+.+
T Consensus 136 vl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~~~~~l~gHkd~VvacfF~~~~~~l~tvskdG~l~~ 215 (893)
T KOG0291|consen 136 VLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNLFTYALNGHKDYVVACFFGANSLDLYTVSKDGALFV 215 (893)
T ss_pred eEeeeecCCccceeEEEeccCCceEEeccccceEEEEEeccccccceEeccCCCcceEEEEeccCcceEEEEecCceEEE
Confidence 34667889999999999999999999999999999999887665 5667899999999999999999999999999999
Q ss_pred EEcCCCCCC-------------------Cc-------ceEE-EE-Eec--------------------------------
Q psy8748 1761 YDLNNRDST-------------------GA-------AKVI-RE-LLG-------------------------------- 1780 (2004)
Q Consensus 1761 WDl~t~~~~-------------------~~-------~k~i-~s-l~g-------------------------------- 1780 (2004)
|..+..... .. .... +. +..
T Consensus 216 W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP 295 (893)
T KOG0291|consen 216 WTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELP 295 (893)
T ss_pred EEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEEEecCCeeEEEecC
Confidence 998721000 00 0000 00 000
Q ss_pred ----------CccceeeeEEe-CCCcEEEeec-CCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeE
Q psy8748 1781 ----------YEGFLSSCRFI-DDTTLLTGSG-DMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSC 1848 (2004)
Q Consensus 1781 ----------h~~~Vssvafs-dd~~LlSgS~-DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsI 1848 (2004)
....|..+.|+ .++.++.|+. -|.+.+|+..+...+.+ ..+|...+++++++|||+++++|+.||.|
T Consensus 296 ~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlK-QQgH~~~i~~l~YSpDgq~iaTG~eDgKV 374 (893)
T KOG0291|consen 296 DFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLK-QQGHSDRITSLAYSPDGQLIATGAEDGKV 374 (893)
T ss_pred CceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeee-ccccccceeeEEECCCCcEEEeccCCCcE
Confidence 11222233333 2333444443 37888888877766644 36899999999999999999999999999
Q ss_pred EEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEE
Q psy8748 1849 KLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCG 1928 (2004)
Q Consensus 1849 rIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSG 1928 (2004)
+|||...+-|..++..|...|+.+.|+..|+.+++++-||+|+.||+...+...++..+.. ....|++.+|.|..+++|
T Consensus 375 KvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p-~QfscvavD~sGelV~AG 453 (893)
T KOG0291|consen 375 KVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEP-IQFSCVAVDPSGELVCAG 453 (893)
T ss_pred EEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCc-eeeeEEEEcCCCCEEEee
Confidence 9999999999999999999999999999999999999999999999999999999976543 567899999999999999
Q ss_pred eCCC-eEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1929 SDDN-NVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1929 SsDG-sIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
+.|. .|.+|++.+|+.+..+.||.++|.+++|+|++..|+++++|.+|++|++-+.
T Consensus 454 ~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 454 AQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred ccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeecc
Confidence 9885 6999999999999999999999999999999999999999999999998543
No 13
>KOG0315|consensus
Probab=99.97 E-value=7.5e-30 Score=281.89 Aligned_cols=289 Identities=22% Similarity=0.390 Sum_probs=252.0
Q ss_pred CEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccc
Q psy8748 1705 RHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGF 1784 (2004)
Q Consensus 1705 ~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~ 1784 (2004)
-+|+++|.|.+|++|...+|.+.++++..++.|..+...|+++.|++++.. .|++||+++.. ...+.++.+|.+.
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~q-hvRlyD~~S~n----p~Pv~t~e~h~kN 85 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQ-HVRLYDLNSNN----PNPVATFEGHTKN 85 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCC-eeEEEEccCCC----CCceeEEeccCCc
Confidence 479999999999999999999999999889999999999999999999865 59999998764 3477889999999
Q ss_pred eeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEe
Q psy8748 1785 LSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFF 1863 (2004)
Q Consensus 1785 Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~ 1863 (2004)
|..+.|. ++..+++|++||+++|||++...+... ..|..+|+++..+|+...|++|..+|.|++||+....+...+.
T Consensus 86 VtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~--~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~li 163 (311)
T KOG0315|consen 86 VTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRN--YQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELI 163 (311)
T ss_pred eEEEEEeecCeEEEecCCCceEEEEeccCcccchh--ccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccC
Confidence 9999998 455699999999999999998555433 3677999999999999999999999999999999887665553
Q ss_pred -cCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEE----cCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy8748 1864 -GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATY----LPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWD 1938 (2004)
Q Consensus 1864 -~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~----~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWD 1938 (2004)
.....|.++...|||.+++.+...|+.++|++-+......+ ....|.+.+..+.+|||+++|++++.|.+++||+
T Consensus 164 Pe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn 243 (311)
T KOG0315|consen 164 PEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWN 243 (311)
T ss_pred CCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEe
Confidence 34568999999999999999999999999998765433222 2356778899999999999999999999999999
Q ss_pred CCCC-eeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEEeecCCCCccccc
Q psy8748 1939 LLKT-THNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003 (2004)
Q Consensus 1939 L~tg-e~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik~~~~h~~~VtsV 2003 (2004)
..+. +....+.+|...+.+.+||.||.||++|+.|+.+++|++..+ +.++.+++|.++-.|+
T Consensus 244 ~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~---k~v~qy~gh~K~~vc~ 306 (311)
T KOG0315|consen 244 TDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAG---KEVRQYQGHHKAAVCV 306 (311)
T ss_pred cCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccC---ceeeecCCcccccEEE
Confidence 9887 666778999999999999999999999999999999999998 4567788887766664
No 14
>KOG0319|consensus
Probab=99.97 E-value=2e-30 Score=317.92 Aligned_cols=298 Identities=21% Similarity=0.354 Sum_probs=266.1
Q ss_pred cccccccccccccceeEEEEe-CCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEE
Q psy8748 1681 KLMPKKSLKGHINKVNSVHYS-GDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCT 1759 (2004)
Q Consensus 1681 k~~pi~sL~GHt~~VtsLaFS-PDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIr 1759 (2004)
...+.+.+-|..+.|.+++|- |+.+++|.+++.+.+++++..+..+. .+.+|+..|.++....+|.+|++|+.|.+++
T Consensus 312 ~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~-ii~GH~e~vlSL~~~~~g~llat~sKD~svi 390 (775)
T KOG0319|consen 312 ELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQ-IIPGHTEAVLSLDVWSSGDLLATGSKDKSVI 390 (775)
T ss_pred ccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceE-EEeCchhheeeeeecccCcEEEEecCCceEE
Confidence 445677888999999999986 67889999999999999998777665 7899999999999666788999999999999
Q ss_pred EEEcCCCCCCCcceEEEEEecCccceeeeEEeCC--CcEEEeecCCeEEEEECCCCce----eE----EeeccccCCeEE
Q psy8748 1760 VYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD--TTLLTGSGDMKIVTWNLETGQR----IH----EVAQAHIGDVVS 1829 (2004)
Q Consensus 1760 VWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd--~~LlSgS~DGtI~IWDl~tg~~----i~----~il~~h~~~Its 1829 (2004)
+|.++++. ..........+|...+.+++++.. ..|++++.|+++++|++...+. +. .....|...|.|
T Consensus 391 lWr~~~~~--~~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~ 468 (775)
T KOG0319|consen 391 LWRLNNNC--SKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINC 468 (775)
T ss_pred EEEecCCc--chhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccc
Confidence 99995432 244556677899999999999743 4699999999999999976221 11 123579999999
Q ss_pred EEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCC
Q psy8748 1830 ISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNK 1909 (2004)
Q Consensus 1830 LafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~ 1909 (2004)
++++|+.+.+++|+.|.+.+||++.+.....++.+|...|+|+.|+|..+.++++|.|++|+||.+.++.++.++ .+|
T Consensus 469 Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~--eGH 546 (775)
T KOG0319|consen 469 VAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTF--EGH 546 (775)
T ss_pred eEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeee--cCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 577
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q psy8748 1910 NSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESN 1983 (2004)
Q Consensus 1910 ~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlst 1983 (2004)
...|..+.|-.+|..|++++.||-|++|++++++|..++.+|.++|++++.++.+.+++||+.||.|.+|.-.+
T Consensus 547 ~~aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~wkD~T 620 (775)
T KOG0319|consen 547 TSAVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFWKDVT 620 (775)
T ss_pred cceeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEeecCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999997654
No 15
>KOG0279|consensus
Probab=99.97 E-value=1.7e-29 Score=283.39 Aligned_cols=290 Identities=25% Similarity=0.395 Sum_probs=253.4
Q ss_pred ccccccccccceeEEEEeCC-CCEEEEEeCCCeEEEEECC-----CCceEEEeeCCCCceEEEEEecCCCEEEEeecCCe
Q psy8748 1684 PKKSLKGHINKVNSVHYSGD-SRHCVSGSLDGKLIIWDTW-----TGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNM 1757 (2004)
Q Consensus 1684 pi~sL~GHt~~VtsLaFSPD-G~~LASGS~DGtIrVWDl~-----Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGt 1757 (2004)
...+|.+|++.|+.++..+. .+.+++++.|.++.+|++. .|...+.+.+|...|..+..++||++.++++.||.
T Consensus 7 l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~ 86 (315)
T KOG0279|consen 7 LRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGT 86 (315)
T ss_pred eeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccccce
Confidence 45678999999999999986 5688999999999999764 46778899999999999999999999999999999
Q ss_pred EEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCC-CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCC-
Q psy8748 1758 CTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD-TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPD- 1835 (2004)
Q Consensus 1758 IrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd-~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPd- 1835 (2004)
+++||+.++ +..+.+.+|...|.+++++++ .++++|+.|.+|++|+...+......-..+.+.|.|+.|+|+
T Consensus 87 lrlWDl~~g------~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~ 160 (315)
T KOG0279|consen 87 LRLWDLATG------ESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNE 160 (315)
T ss_pred EEEEEecCC------cEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCC
Confidence 999999864 567889999999999999955 569999999999999998665553333334888999999997
Q ss_pred -CCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeE
Q psy8748 1836 -GQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFT 1914 (2004)
Q Consensus 1836 -g~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~It 1914 (2004)
..+|++++.|++|++||+++.+....+.+|.+.++.++++|||...++|+.||.+.+||++.++.+..+ .+...|.
T Consensus 161 ~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl---~a~~~v~ 237 (315)
T KOG0279|consen 161 SNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSL---EAFDIVN 237 (315)
T ss_pred CCcEEEEccCCceEEEEccCCcchhhccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEec---cCCCeEe
Confidence 679999999999999999999999999999999999999999999999999999999999999998777 5567899
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEcc----C-----CCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q psy8748 1915 SCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSG----H-----ENRVTSISLSPNGMALVTSSWDQFVKVWQESN 1983 (2004)
Q Consensus 1915 sLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~g----H-----s~~VtsLaFSPDg~~LaSgS~DGtIrIWdlst 1983 (2004)
+++|+|+...|+.+.. ..|+|||+.++.++..++. . .-...+++|++||..|++|..|+.|++|.+..
T Consensus 238 sl~fspnrywL~~at~-~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~~ 314 (315)
T KOG0279|consen 238 SLCFSPNRYWLCAATA-TSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVAK 314 (315)
T ss_pred eEEecCCceeEeeccC-CceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEeec
Confidence 9999998877777654 4599999999888776642 1 22357789999999999999999999998753
No 16
>KOG0295|consensus
Probab=99.97 E-value=3.2e-30 Score=296.86 Aligned_cols=293 Identities=28% Similarity=0.441 Sum_probs=272.5
Q ss_pred cccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEE
Q psy8748 1681 KLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTV 1760 (2004)
Q Consensus 1681 k~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrV 1760 (2004)
++.....+.||..+|+.+-|+|+-..+++++.|++|++||..+|+....+++|...+.++.|+..|+++++++.|-.+++
T Consensus 97 Rp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~L 176 (406)
T KOG0295|consen 97 RPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKL 176 (406)
T ss_pred CCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhh
Confidence 34456788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCcceEEEEEecCccceeeeEEeC-CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEE
Q psy8748 1761 YDLNNRDSTGAAKVIRELLGYEGFLSSCRFID-DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYF 1839 (2004)
Q Consensus 1761 WDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd-d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~L 1839 (2004)
||.+. ....++...+|...+.++.|.+ ++++++++.|.+|+.|++.+|.++.. +.+|...|..+..+.||..+
T Consensus 177 Wd~~~-----~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t-~~~h~ewvr~v~v~~DGti~ 250 (406)
T KOG0295|consen 177 WDFDT-----FFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKT-FPGHSEWVRMVRVNQDGTII 250 (406)
T ss_pred eeHHH-----HHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEe-ccCchHhEEEEEecCCeeEE
Confidence 99975 3567788889999999999984 56799999999999999999999854 57899999999999999999
Q ss_pred EEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCC---------------CCEEEEEECCCeEEEEEccCCceeEEE
Q psy8748 1840 VTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPS---------------GLAFATGSEDKTARLFDIRADQQIATY 1904 (2004)
Q Consensus 1840 aSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPd---------------g~~LaSgS~DGtIrIWDLrtgk~i~t~ 1904 (2004)
++++.|.++++|-+.++++...++.|+.+|.|++|.|. +.++.+++.|++|++||+.++.++.++
T Consensus 251 As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL 330 (406)
T KOG0295|consen 251 ASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTL 330 (406)
T ss_pred EecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEE
Confidence 99999999999999999988999999999999999873 258999999999999999999999888
Q ss_pred cCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Q psy8748 1905 LPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQE 1981 (2004)
Q Consensus 1905 ~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdl 1981 (2004)
.+|...|..++|+|.|+||+++.+|+++++||++++++.+.+..|..-|+++.|+.+..++++|+-|.++++|.-
T Consensus 331 --~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 331 --VGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred --ecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeec
Confidence 567789999999999999999999999999999999999999999999999999999999999999999999964
No 17
>KOG0296|consensus
Probab=99.97 E-value=5e-29 Score=287.40 Aligned_cols=329 Identities=21% Similarity=0.277 Sum_probs=288.2
Q ss_pred CCCCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccC
Q psy8748 1549 NAPEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMK 1628 (2004)
Q Consensus 1549 ~a~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~s 1628 (2004)
+.-..|++.|.+++.+|+.+++|| |+.|-.-.+|+..+ +.
T Consensus 58 ~tF~~H~~svFavsl~P~~~l~aT-GGgDD~AflW~~~~-------------ge-------------------------- 97 (399)
T KOG0296|consen 58 VTFDKHTDSVFAVSLHPNNNLVAT-GGGDDLAFLWDIST-------------GE-------------------------- 97 (399)
T ss_pred eehhhcCCceEEEEeCCCCceEEe-cCCCceEEEEEccC-------------Cc--------------------------
Confidence 334459999999999999999999 99998999999877 11
Q ss_pred CCCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEE
Q psy8748 1629 PTSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCV 1708 (2004)
Q Consensus 1629 pdgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LA 1708 (2004)
....+.||++.|+++.||.||.+||
T Consensus 98 -------------------------------------------------------~~~eltgHKDSVt~~~FshdgtlLA 122 (399)
T KOG0296|consen 98 -------------------------------------------------------FAGELTGHKDSVTCCSFSHDGTLLA 122 (399)
T ss_pred -------------------------------------------------------ceeEecCCCCceEEEEEccCceEEE
Confidence 1234678999999999999999999
Q ss_pred EEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeee
Q psy8748 1709 SGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSC 1788 (2004)
Q Consensus 1709 SGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssv 1788 (2004)
||+.+|.|+||+..+|.....+...-..|.=+.|+|.+..|+.|+.||.+.+|.+.+. ...+.+.+|...+++-
T Consensus 123 TGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~------~~~kv~~Gh~~~ct~G 196 (399)
T KOG0296|consen 123 TGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQ------ALCKVMSGHNSPCTCG 196 (399)
T ss_pred ecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCc------ceeeEecCCCCCcccc
Confidence 9999999999999999998888766677888999999999999999999999999753 5667888999999999
Q ss_pred EEeC-CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEe----
Q psy8748 1789 RFID-DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFF---- 1863 (2004)
Q Consensus 1789 afsd-d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~---- 1863 (2004)
.|.+ +.+++++..||+|++||..+++.++++........+++.++..+..++.|..++.+++....+++.+....
T Consensus 197 ~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~ 276 (399)
T KOG0296|consen 197 EFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVP 276 (399)
T ss_pred cccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCc
Confidence 9885 45699999999999999999999988866667778899999999999999999999999999998877766
Q ss_pred ----cCCCCeEEEEEeC---CCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q psy8748 1864 ----GHEADVNSVCFHP---SGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHV 1936 (2004)
Q Consensus 1864 ----~h~s~ItsIafSP---dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrI 1936 (2004)
.+...+.|+.+.| .-.+.++|+.||+|.|||+...+....+ .|..+|+.+.|-+ ..+|++++.+|.|+.
T Consensus 277 ~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c---~he~~V~~l~w~~-t~~l~t~c~~g~v~~ 352 (399)
T KOG0296|consen 277 ELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHIC---EHEDGVTKLKWLN-TDYLLTACANGKVRQ 352 (399)
T ss_pred cccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhheec---cCCCceEEEEEcC-cchheeeccCceEEe
Confidence 3444555555554 5567899999999999999887776666 4556799999998 889999999999999
Q ss_pred EECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1937 WDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1937 WDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
||.++|+++..+.||...|.+++++|++++++|+|.|++.+||+..
T Consensus 353 wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 353 WDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred eeccccceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 9999999999999999999999999999999999999999999875
No 18
>KOG0279|consensus
Probab=99.97 E-value=6e-29 Score=279.05 Aligned_cols=290 Identities=25% Similarity=0.395 Sum_probs=247.7
Q ss_pred CCCCCCCeEEEEEccCCC-EEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCC
Q psy8748 1551 PEPCKEQRNAVSFHACST-LLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKP 1629 (2004)
Q Consensus 1551 ~e~Hk~~VtsVsFSPdGk-~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~sp 1629 (2004)
.+.|++.|+.++..+.+. .|.+ ++.|.++.+|++.. +. ..
T Consensus 11 l~gh~d~Vt~la~~~~~~~~l~s-asrDk~ii~W~L~~--------------------dd----------~~-------- 51 (315)
T KOG0279|consen 11 LEGHTDWVTALAIKIKNSDILVS-ASRDKTIIVWKLTS--------------------DD----------IK-------- 51 (315)
T ss_pred ecCCCceEEEEEeecCCCceEEE-cccceEEEEEEecc--------------------Cc----------cc--------
Confidence 457999999999999955 5555 99999999999977 00 00
Q ss_pred CCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEE
Q psy8748 1630 TSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVS 1709 (2004)
Q Consensus 1630 dgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LAS 1709 (2004)
-..+++.+.||...|..++.++||++.++
T Consensus 52 ---------------------------------------------------~G~~~r~~~GHsH~v~dv~~s~dg~~alS 80 (315)
T KOG0279|consen 52 ---------------------------------------------------YGVPVRRLTGHSHFVSDVVLSSDGNFALS 80 (315)
T ss_pred ---------------------------------------------------cCceeeeeeccceEecceEEccCCceEEe
Confidence 01256788999999999999999999999
Q ss_pred EeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEec--Cccceee
Q psy8748 1710 GSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLG--YEGFLSS 1787 (2004)
Q Consensus 1710 GS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~g--h~~~Vss 1787 (2004)
++.||++++||+.+|+..+.|.+|...|.+++|++|.+.+++|+.|.+|++|++-.. ...+... +.+.|.|
T Consensus 81 ~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~-------ck~t~~~~~~~~WVsc 153 (315)
T KOG0279|consen 81 ASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV-------CKYTIHEDSHREWVSC 153 (315)
T ss_pred ccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeeccc-------EEEEEecCCCcCcEEE
Confidence 999999999999999999999999999999999999999999999999999998542 2333332 3789999
Q ss_pred eEEeCCC---cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEec
Q psy8748 1788 CRFIDDT---TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFG 1864 (2004)
Q Consensus 1788 vafsdd~---~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~ 1864 (2004)
+.|+|+. .+++++.|++|++||+++.+.. ..+.+|.+.++.++++|||...++|+.||.+.+||++.++.+..+ +
T Consensus 154 vrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~-~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl-~ 231 (315)
T KOG0279|consen 154 VRFSPNESNPIIVSASWDKTVKVWNLRNCQLR-TTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSL-E 231 (315)
T ss_pred EEEcCCCCCcEEEEccCCceEEEEccCCcchh-hccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEec-c
Confidence 9999763 5999999999999999987766 445689999999999999999999999999999999999998777 6
Q ss_pred CCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCC-------CCCeEEEEEcCCCCEEEEEeCCCeEEEE
Q psy8748 1865 HEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNK-------NSGFTSCAVSSSGRYIFCGSDDNNVHVW 1937 (2004)
Q Consensus 1865 h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~-------~s~ItsLafSPdG~~LaSGSsDGsIrIW 1937 (2004)
|...|.+++|+|+...|+.+. +..|+|||+.++..+..+..... .....+++|++||..|++|..|+.|++|
T Consensus 232 a~~~v~sl~fspnrywL~~at-~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~ 310 (315)
T KOG0279|consen 232 AFDIVNSLCFSPNRYWLCAAT-ATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVW 310 (315)
T ss_pred CCCeEeeEEecCCceeEeecc-CCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEE
Confidence 789999999999987777665 55699999999888766643322 2345688999999999999999999999
Q ss_pred ECC
Q psy8748 1938 DLL 1940 (2004)
Q Consensus 1938 DL~ 1940 (2004)
.+.
T Consensus 311 qv~ 313 (315)
T KOG0279|consen 311 QVA 313 (315)
T ss_pred Eee
Confidence 874
No 19
>KOG0265|consensus
Probab=99.97 E-value=2.8e-29 Score=283.87 Aligned_cols=289 Identities=22% Similarity=0.384 Sum_probs=256.6
Q ss_pred ccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECC-CCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEE
Q psy8748 1684 PKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTW-TGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYD 1762 (2004)
Q Consensus 1684 pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~-Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWD 1762 (2004)
|...+.||.+.|+.+.|+|+|.+||+||.|..|.+|++. .-+....+++|.+.|..+.|.+|++.+++++.|.+++.||
T Consensus 39 p~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD 118 (338)
T KOG0265|consen 39 PIMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWD 118 (338)
T ss_pred hhhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEe
Confidence 566788999999999999999999999999999999954 4466778899999999999999999999999999999999
Q ss_pred cCCCCCCCcceEEEEEecCccceeeeEEeCC--CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEE
Q psy8748 1763 LNNRDSTGAAKVIRELLGYEGFLSSCRFIDD--TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFV 1840 (2004)
Q Consensus 1763 l~t~~~~~~~k~i~sl~gh~~~Vssvafsdd--~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~La 1840 (2004)
.+++ +..+...+|...+..+.-..- ..+.+++.||++++||+++...++.+ ..+.+++++.|..++..++
T Consensus 119 ~~tG------~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~--~~kyqltAv~f~d~s~qv~ 190 (338)
T KOG0265|consen 119 AETG------KRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF--ENKYQLTAVGFKDTSDQVI 190 (338)
T ss_pred cccc------eeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcc--ccceeEEEEEeccccccee
Confidence 9865 667788889999988885433 34778899999999999988877554 3456799999999999999
Q ss_pred EEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCC----ceeEEEcCCCCC--CCeE
Q psy8748 1841 TGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRAD----QQIATYLPPNKN--SGFT 1914 (2004)
Q Consensus 1841 SGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtg----k~i~t~~~~~~~--s~It 1914 (2004)
+|+-|+.|++||++.+.....+.+|.++|+.+..+++|.++.+-+.|.++++||++-. +++..+....|. ....
T Consensus 191 sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL 270 (338)
T KOG0265|consen 191 SGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLL 270 (338)
T ss_pred eccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcc
Confidence 9999999999999999999999999999999999999999999999999999999753 346666554443 3456
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Q psy8748 1915 SCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQ 1980 (2004)
Q Consensus 1915 sLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWd 1980 (2004)
.++|+|+++.+.+|+.|..+++||......+..+.||.+.|.+++|+|...+|.+++.|.+|++=.
T Consensus 271 ~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lge 336 (338)
T KOG0265|consen 271 KCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLGE 336 (338)
T ss_pred eeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEeec
Confidence 789999999999999999999999999899999999999999999999999999999999998643
No 20
>KOG0315|consensus
Probab=99.97 E-value=8.8e-29 Score=273.49 Aligned_cols=260 Identities=19% Similarity=0.349 Sum_probs=230.1
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECCCCc--eEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCC
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGN--KTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTG 1770 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk--~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~ 1770 (2004)
+.|+.+.+.||++.||+++. -.|++||+.++. .+.++.+|+..|+++.|..+|+.+++|+.||+++|||++..
T Consensus 41 sqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~---- 115 (311)
T KOG0315|consen 41 SQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSL---- 115 (311)
T ss_pred cceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCc----
Confidence 57889999999999999986 579999999875 58899999999999999999999999999999999999763
Q ss_pred cceEEEEEecCccceeeeEEeCC-CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEE
Q psy8748 1771 AAKVIRELLGYEGFLSSCRFIDD-TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCK 1849 (2004)
Q Consensus 1771 ~~k~i~sl~gh~~~Vssvafsdd-~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIr 1849 (2004)
.......+..+|.++..+++ ..+++|..+|.|++||+....+...........|.++.+.|||.+++.+...|..+
T Consensus 116 ---~~qR~~~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cy 192 (311)
T KOG0315|consen 116 ---SCQRNYQHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCY 192 (311)
T ss_pred ---ccchhccCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEE
Confidence 23445556789999988865 46999999999999999998887777777778899999999999999999999999
Q ss_pred EEECCCC------eEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCC
Q psy8748 1850 LWDFREK------KCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGR 1923 (2004)
Q Consensus 1850 IWDlrs~------k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~ 1923 (2004)
+|++-.. +++..++.|.+.+..+.++|++++|++++.|.+++||+..+. ........++...+..++||.||.
T Consensus 193 vW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~-~kle~~l~gh~rWvWdc~FS~dg~ 271 (311)
T KOG0315|consen 193 VWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDF-FKLELVLTGHQRWVWDCAFSADGE 271 (311)
T ss_pred EEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceEEEEecCCc-eeeEEEeecCCceEEeeeeccCcc
Confidence 9998653 456778899999999999999999999999999999999887 444444567778999999999999
Q ss_pred EEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEc
Q psy8748 1924 YIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLS 1961 (2004)
Q Consensus 1924 ~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFS 1961 (2004)
||++|+.|+.+++||+..++.+....+|.....|++..
T Consensus 272 YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 272 YLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred EEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence 99999999999999999999999999999888887763
No 21
>KOG0306|consensus
Probab=99.97 E-value=1.6e-28 Score=300.61 Aligned_cols=288 Identities=23% Similarity=0.415 Sum_probs=257.5
Q ss_pred ccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCC
Q psy8748 1686 KSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNN 1765 (2004)
Q Consensus 1686 ~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t 1765 (2004)
.++.||...|+++++|.+...+++|+ .+.+++|+..++++++++... .+.+..|.|.++++++|...|.+.+||+..
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sga-~~SikiWn~~t~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS 443 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASGA-GESIKIWNRDTLKCIRTITCG--YILASKFVPGDRYIVLGTKNGELQVFDLAS 443 (888)
T ss_pred eeeccchhheeEEEeecCceeeeecC-CCcEEEEEccCcceeEEeccc--cEEEEEecCCCceEEEeccCCceEEEEeeh
Confidence 46789999999999999988888876 578999999999999998754 789999999999999999999999999975
Q ss_pred CCCCCcceEEEEEecCccceeeeEEeCCC-cEEEeecCCeEEEEECCC-----CceeE--E----eeccccCCeEEEEEC
Q psy8748 1766 RDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLET-----GQRIH--E----VAQAHIGDVVSISLS 1833 (2004)
Q Consensus 1766 ~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~DGtI~IWDl~t-----g~~i~--~----il~~h~~~ItsLafS 1833 (2004)
. ........|.+.++.++..+++ .+++|+.|.+|++||..- |.... . ..-.....|.|+.++
T Consensus 444 ~------~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~S 517 (888)
T KOG0306|consen 444 A------SLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVS 517 (888)
T ss_pred h------hhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEc
Confidence 3 4556677899999999998655 599999999999999742 11111 1 112345789999999
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCe
Q psy8748 1834 PDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGF 1913 (2004)
Q Consensus 1834 Pdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~I 1913 (2004)
|||++++++--|+++++|-+++-+....+.+|.-||.|+..+||++.+++||.|.+|++|-++-|.+-..+ ..|...|
T Consensus 518 pdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~--fAHdDSv 595 (888)
T KOG0306|consen 518 PDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSF--FAHDDSV 595 (888)
T ss_pred CCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhh--hcccCce
Confidence 99999999999999999999999999999999999999999999999999999999999999999998887 4677889
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1914 TSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1914 tsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
.++.|-|+...+++++.||.|+-||..+.+.+.++.+|...|++++.+|+|.+++++|.|..|++|.....
T Consensus 596 m~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE~tde 666 (888)
T KOG0306|consen 596 MSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWERTDE 666 (888)
T ss_pred eEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEEeccCCceeEeeeccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999998774
No 22
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.97 E-value=7e-28 Score=271.99 Aligned_cols=282 Identities=34% Similarity=0.558 Sum_probs=246.0
Q ss_pred CCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCc
Q psy8748 1553 PCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSS 1632 (2004)
Q Consensus 1553 ~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgS 1632 (2004)
.|+++|++++|+|+|++|++ |+.||.+++|+..+ .+
T Consensus 7 ~h~~~i~~~~~~~~~~~l~~-~~~~g~i~i~~~~~-------------~~------------------------------ 42 (289)
T cd00200 7 GHTGGVTCVAFSPDGKLLAT-GSGDGTIKVWDLET-------------GE------------------------------ 42 (289)
T ss_pred ccCCCEEEEEEcCCCCEEEE-eecCcEEEEEEeeC-------------CC------------------------------
Confidence 58889999999999999999 99999999999877 11
Q ss_pred chhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEeC
Q psy8748 1633 INIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSL 1712 (2004)
Q Consensus 1633 idi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~ 1712 (2004)
....+.+|...+.++.|+++++++++++.
T Consensus 43 ---------------------------------------------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 71 (289)
T cd00200 43 ---------------------------------------------------LLRTLKGHTGPVRDVAASADGTYLASGSS 71 (289)
T ss_pred ---------------------------------------------------cEEEEecCCcceeEEEECCCCCEEEEEcC
Confidence 01234457788899999999999999999
Q ss_pred CCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC
Q psy8748 1713 DGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID 1792 (2004)
Q Consensus 1713 DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd 1792 (2004)
||.|++||+.+++....+..|...|.++.|+++++++++++.+|.|.+|++.+. .....+..|...+.++.+.+
T Consensus 72 ~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~i~~~~~~~ 145 (289)
T cd00200 72 DKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETG------KCLTTLRGHTDWVNSVAFSP 145 (289)
T ss_pred CCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCc------EEEEEeccCCCcEEEEEEcC
Confidence 999999999998888889999999999999999899999888999999999743 44555667888999999998
Q ss_pred CCcEEEe-ecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEE
Q psy8748 1793 DTTLLTG-SGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNS 1871 (2004)
Q Consensus 1793 d~~LlSg-S~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~Its 1871 (2004)
++.++++ +.+|.|++||+++++....+ ..|...+.+++|+|+++.+++++.||.|++||++.++.+..+..|...+.+
T Consensus 146 ~~~~l~~~~~~~~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~ 224 (289)
T cd00200 146 DGTFVASSSQDGTIKLWDLRTGKCVATL-TGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNS 224 (289)
T ss_pred cCCEEEEEcCCCcEEEEEccccccceeE-ecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEE
Confidence 6655554 45999999999987776444 577789999999999999999999999999999998888888888999999
Q ss_pred EEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy8748 1872 VCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWD 1938 (2004)
Q Consensus 1872 IafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWD 1938 (2004)
++|+|++.++++++.||.|++||+.+++....+. .+...+.+++|+++++++++++.||.|++|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 225 VAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLS--GHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEcc--ccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 9999998888888889999999999888777764 5567899999999999999999999999996
No 23
>KOG0285|consensus
Probab=99.97 E-value=3.7e-29 Score=286.38 Aligned_cols=298 Identities=24% Similarity=0.390 Sum_probs=269.3
Q ss_pred CCCcccccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecC
Q psy8748 1676 DAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMD 1755 (2004)
Q Consensus 1676 ~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~D 1755 (2004)
+.++.+|+..+++.||.+.|.|+++.|-.+++++|+.|++|+|||+.+|+...++.+|...|..+++++...|+++++.|
T Consensus 135 PeWHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~ged 214 (460)
T KOG0285|consen 135 PEWHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGED 214 (460)
T ss_pred ccccCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCC
Confidence 45667888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCC-CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC
Q psy8748 1756 NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD-TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP 1834 (2004)
Q Consensus 1756 GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd-~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP 1834 (2004)
+.|+.||++.. +.++.+.||-..|.|+...+. +.+++|+.|..+++||+++...+ ..+.+|..+|.++.+.|
T Consensus 215 k~VKCwDLe~n------kvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V-~~l~GH~~~V~~V~~~~ 287 (460)
T KOG0285|consen 215 KQVKCWDLEYN------KVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASV-HVLSGHTNPVASVMCQP 287 (460)
T ss_pred CeeEEEechhh------hhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceE-EEecCCCCcceeEEeec
Confidence 99999999854 678889999999999998864 56999999999999999999888 44579999999999999
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeE
Q psy8748 1835 DGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFT 1914 (2004)
Q Consensus 1835 dg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~It 1914 (2004)
-...+++|+.|++|++||++.++...++..|...+++++.+|....|++++.| .|+-|++..|..+..+ .++...+.
T Consensus 288 ~dpqvit~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nl--sgh~~iin 364 (460)
T KOG0285|consen 288 TDPQVITGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNL--SGHNAIIN 364 (460)
T ss_pred CCCceEEecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhcc--ccccceee
Confidence 88899999999999999999999999999999999999999999999999877 5999999988887774 56778889
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEcc--------CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1915 SCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSG--------HENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1915 sLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~g--------Hs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
+++...|| ++++|+++|.+.+||.++|...+.... .+..|.+.+|...|..|++|..|.+|++|.-++.
T Consensus 365 tl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~keDe~ 441 (460)
T KOG0285|consen 365 TLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKEDEH 441 (460)
T ss_pred eeeeccCc-eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEecccc
Confidence 99988765 678899999999999998876655521 3457899999999999999999999999987654
No 24
>KOG0318|consensus
Probab=99.97 E-value=8.1e-28 Score=286.26 Aligned_cols=330 Identities=17% Similarity=0.239 Sum_probs=266.7
Q ss_pred CCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCcc
Q psy8748 1554 CKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSSI 1633 (2004)
Q Consensus 1554 Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgSi 1633 (2004)
|+.-|+||+|||||.+.|| .+.||+|.++|-.+ +..+..+..
T Consensus 189 HskFV~~VRysPDG~~Fat-~gsDgki~iyDGkt-------------ge~vg~l~~------------------------ 230 (603)
T KOG0318|consen 189 HSKFVNCVRYSPDGSRFAT-AGSDGKIYIYDGKT-------------GEKVGELED------------------------ 230 (603)
T ss_pred cccceeeEEECCCCCeEEE-ecCCccEEEEcCCC-------------ccEEEEecC------------------------
Confidence 7778999999999999999 99999999999877 443333321
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEeCC
Q psy8748 1634 NIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLD 1713 (2004)
Q Consensus 1634 di~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~D 1713 (2004)
-.+|++.|.+++|+||++.++|++.|
T Consensus 231 ------------------------------------------------------~~aHkGsIfalsWsPDs~~~~T~SaD 256 (603)
T KOG0318|consen 231 ------------------------------------------------------SDAHKGSIFALSWSPDSTQFLTVSAD 256 (603)
T ss_pred ------------------------------------------------------CCCccccEEEEEECCCCceEEEecCC
Confidence 12599999999999999999999999
Q ss_pred CeEEEEECCCCceEEE-------------------------------------------eeCCCCceEEEEEecCCCEEE
Q psy8748 1714 GKLIIWDTWTGNKTQV-------------------------------------------IPLRSAWVMSVAFAQSGNFVA 1750 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~t-------------------------------------------i~~Ht~~ItsLafSPdg~~La 1750 (2004)
.+++|||+.+.+.+++ +.+|...|+++..++++.+|+
T Consensus 257 kt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~ 336 (603)
T KOG0318|consen 257 KTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIY 336 (603)
T ss_pred ceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEE
Confidence 9999999876544332 347888999999999999999
Q ss_pred EeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCcee-----------E--
Q psy8748 1751 CGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRI-----------H-- 1817 (2004)
Q Consensus 1751 SGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i-----------~-- 1817 (2004)
+|+.||.|.-|+...+... ...-.+|...|.++.-...+.+++.+.|.++++.++..+... .
T Consensus 337 SgsyDG~I~~W~~~~g~~~-----~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~l 411 (603)
T KOG0318|consen 337 SGSYDGHINSWDSGSGTSD-----RLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGL 411 (603)
T ss_pred eeccCceEEEEecCCcccc-----ccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeE
Confidence 9999999999999765311 112256888888888888888999999999999876432100 0
Q ss_pred -----------------Eeec--------cccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeE--EEEEecCCCCeE
Q psy8748 1818 -----------------EVAQ--------AHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKC--VQTFFGHEADVN 1870 (2004)
Q Consensus 1818 -----------------~il~--------~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~--I~tl~~h~s~It 1870 (2004)
.++. .-.....+++++|++..+++|+.||.|++|.+..+.. ......|.++|+
T Consensus 412 av~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT 491 (603)
T KOG0318|consen 412 AVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAIT 491 (603)
T ss_pred EEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCce
Confidence 0011 1122456889999999999999999999999987543 345568999999
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCee-eEEEc
Q psy8748 1871 SVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTH-NGVLS 1949 (2004)
Q Consensus 1871 sIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~-l~tL~ 1949 (2004)
+++|+||+.+|++|...+++.+||..+.+..... -.-|...|.+++|+|+..++|+|+-|-.|.||++.+... +....
T Consensus 492 ~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~-w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~kP~~~i~ikn 570 (603)
T KOG0318|consen 492 DVAYSPDGAYLAAGDASRKVVLYDVASREVKTNR-WAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVKKPAKHIIIKN 570 (603)
T ss_pred EEEECCCCcEEEEeccCCcEEEEEcccCceecce-eeeeeeeEEEEEeCCCceEEEeccccceEEEEEccChhhheEecc
Confidence 9999999999999999999999999887763222 233668899999999999999999999999999977543 44446
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1950 GHENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1950 gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
+|...|+.+.|- |...+++.|.|..|++|++.
T Consensus 571 AH~~gVn~v~wl-de~tvvSsG~Da~iK~W~v~ 602 (603)
T KOG0318|consen 571 AHLGGVNSVAWL-DESTVVSSGQDANIKVWNVT 602 (603)
T ss_pred ccccCceeEEEe-cCceEEeccCcceeEEeccc
Confidence 799999999997 44579999999999999874
No 25
>KOG0284|consensus
Probab=99.97 E-value=3.8e-30 Score=299.14 Aligned_cols=282 Identities=26% Similarity=0.435 Sum_probs=250.9
Q ss_pred cccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCC
Q psy8748 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTG 1770 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~ 1770 (2004)
-.-+|..+.|.|+|+.|++|+..|.+.+|+..+.........|+.+|+++.|+++|.++++|+.+|.|++|+.+-
T Consensus 95 vkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnm----- 169 (464)
T KOG0284|consen 95 VKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNM----- 169 (464)
T ss_pred cccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccch-----
Confidence 345899999999999999999999999999865555555678999999999999999999999999999999853
Q ss_pred cceEEEEEecCc-cceeeeEEeC-CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeE
Q psy8748 1771 AAKVIRELLGYE-GFLSSCRFID-DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSC 1848 (2004)
Q Consensus 1771 ~~k~i~sl~gh~-~~Vssvafsd-d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsI 1848 (2004)
..++.+..|. ..|.+++|++ +..|+++++||.|+|||....+.. ..+.+|.-.|.+++|+|....+++|+.|..|
T Consensus 170 --nnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee-~vL~GHgwdVksvdWHP~kgLiasgskDnlV 246 (464)
T KOG0284|consen 170 --NNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEE-RVLRGHGWDVKSVDWHPTKGLIASGSKDNLV 246 (464)
T ss_pred --hhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchh-heeccCCCCcceeccCCccceeEEccCCcee
Confidence 3344445554 8899999994 567999999999999999877665 3458999999999999999999999999999
Q ss_pred EEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcC-CCCEEEE
Q psy8748 1849 KLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSS-SGRYIFC 1927 (2004)
Q Consensus 1849 rIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSP-dG~~LaS 1927 (2004)
++||.+++.++.++.+|+..|..+.|++++++|+++|.|..++++|+++.+.+..+ .+|...++++.|+| ...++.+
T Consensus 247 KlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~--r~Hkkdv~~~~WhP~~~~lfts 324 (464)
T KOG0284|consen 247 KLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTY--RGHKKDVTSLTWHPLNESLFTS 324 (464)
T ss_pred EeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHh--hcchhhheeeccccccccceee
Confidence 99999999999999999999999999999999999999999999999988887777 46778899999999 6678899
Q ss_pred EeCCCeEEEEECCCCeeeEEE-ccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1928 GSDDNNVHVWDLLKTTHNGVL-SGHENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1928 GSsDGsIrIWDL~tge~l~tL-~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
|+.||.|..|.+...+++..+ .+|.+.|++++|+|-|..|++|+.|.++++|...
T Consensus 325 gg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~ 380 (464)
T KOG0284|consen 325 GGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN 380 (464)
T ss_pred ccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence 999999999999855555554 5799999999999999999999999999999764
No 26
>KOG0286|consensus
Probab=99.97 E-value=6.9e-28 Score=271.55 Aligned_cols=285 Identities=21% Similarity=0.352 Sum_probs=250.3
Q ss_pred CCCCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccC
Q psy8748 1549 NAPEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMK 1628 (2004)
Q Consensus 1549 ~a~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~s 1628 (2004)
....+|...|.+|.|++|.++|+| ++.||.+.|||.-+ .....
T Consensus 49 r~LkGH~~Ki~~~~ws~Dsr~ivS-aSqDGklIvWDs~T-------------tnK~h----------------------- 91 (343)
T KOG0286|consen 49 RTLKGHLNKIYAMDWSTDSRRIVS-ASQDGKLIVWDSFT-------------TNKVH----------------------- 91 (343)
T ss_pred EEecccccceeeeEecCCcCeEEe-eccCCeEEEEEccc-------------cccee-----------------------
Confidence 445679999999999999999999 99999999999877 11111
Q ss_pred CCCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEE
Q psy8748 1629 PTSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCV 1708 (2004)
Q Consensus 1629 pdgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LA 1708 (2004)
.+.--...|..++|+|.|+++|
T Consensus 92 ----------------------------------------------------------aipl~s~WVMtCA~sPSg~~VA 113 (343)
T KOG0286|consen 92 ----------------------------------------------------------AIPLPSSWVMTCAYSPSGNFVA 113 (343)
T ss_pred ----------------------------------------------------------EEecCceeEEEEEECCCCCeEE
Confidence 1111345789999999999999
Q ss_pred EEeCCCeEEEEECCCC------ceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCc
Q psy8748 1709 SGSLDGKLIIWDTWTG------NKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYE 1782 (2004)
Q Consensus 1709 SGS~DGtIrVWDl~Tg------k~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~ 1782 (2004)
+||-|+...||++.+. +..+.+.+|++.+.|+.|-+ ...|++++.|.++.+||++++ .....+.+|.
T Consensus 114 cGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~ilT~SGD~TCalWDie~g------~~~~~f~GH~ 186 (343)
T KOG0286|consen 114 CGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHILTGSGDMTCALWDIETG------QQTQVFHGHT 186 (343)
T ss_pred ecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCceEecCCCceEEEEEcccc------eEEEEecCCc
Confidence 9999999999999855 44567899999999999986 667899999999999999865 6778899999
Q ss_pred cceeeeEEeC--CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEE
Q psy8748 1783 GFLSSCRFID--DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQ 1860 (2004)
Q Consensus 1783 ~~Vssvafsd--d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~ 1860 (2004)
+.|.++.+.+ .+.+++|+.|+..++||++.+.+. +.+.+|...|.+++|.|+|.-|++|+.|++.++||++..+.+.
T Consensus 187 gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~-qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a 265 (343)
T KOG0286|consen 187 GDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCV-QTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELA 265 (343)
T ss_pred ccEEEEecCCCCCCeEEecccccceeeeeccCccee-EeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEe
Confidence 9999999986 456999999999999999999887 5568999999999999999999999999999999999988887
Q ss_pred EEec--CCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy8748 1861 TFFG--HEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWD 1938 (2004)
Q Consensus 1861 tl~~--h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWD 1938 (2004)
.+.. ...+|++++|+..|+++++|..|.++.+||.-.++....+ .+|...|+|+..+|||.-+++|+.|..++||.
T Consensus 266 ~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L--~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 266 VYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVL--AGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred eeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEe--eccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 7753 2457999999999999999999999999999988888877 47778999999999999999999999999994
No 27
>KOG0293|consensus
Probab=99.96 E-value=1.9e-28 Score=284.48 Aligned_cols=301 Identities=20% Similarity=0.350 Sum_probs=250.5
Q ss_pred CCCcccccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCC---ceEEEeeCCCCceEEEEEecCCCEEEEe
Q psy8748 1676 DAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTG---NKTQVIPLRSAWVMSVAFAQSGNFVACG 1752 (2004)
Q Consensus 1676 ~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tg---k~l~ti~~Ht~~ItsLafSPdg~~LaSG 1752 (2004)
....++.+..+.+..|++.|+-+.||++|+|||+++.|.+..+|++... +..+++.+|..+|..+.|+||.++++++
T Consensus 208 ~~~qip~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaC 287 (519)
T KOG0293|consen 208 GRLQIPSQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLAC 287 (519)
T ss_pred CcccCCchhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEec
Confidence 3445567778899999999999999999999999999999999987654 3467788999999999999999999999
Q ss_pred ecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCC-cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEE
Q psy8748 1753 GMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSIS 1831 (2004)
Q Consensus 1753 S~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLa 1831 (2004)
+.+..+++||+.+++...... .++...+.+++|.+++ .+++|+.|+.+..||.+.... ..........|.+++
T Consensus 288 g~~e~~~lwDv~tgd~~~~y~-----~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~~-~~W~gvr~~~v~dla 361 (519)
T KOG0293|consen 288 GFDEVLSLWDVDTGDLRHLYP-----SGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNIL-GNWEGVRDPKVHDLA 361 (519)
T ss_pred CchHheeeccCCcchhhhhcc-----cCcCCCcceeEEccCCceeEecCCCCcEEEecCCcchh-hcccccccceeEEEE
Confidence 999999999999875322111 1245677788887554 599999999999999975442 222222345699999
Q ss_pred ECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCC
Q psy8748 1832 LSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNS 1911 (2004)
Q Consensus 1832 fSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s 1911 (2004)
..+||+++++.+.|..|++|+..+......+ ....+|++++.+.+++++++.-.+..+++||+...+.+.++..+....
T Consensus 362 it~Dgk~vl~v~~d~~i~l~~~e~~~dr~li-se~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~ 440 (519)
T KOG0293|consen 362 ITYDGKYVLLVTVDKKIRLYNREARVDRGLI-SEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGH 440 (519)
T ss_pred EcCCCcEEEEEecccceeeechhhhhhhccc-cccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccc
Confidence 9999999999999999999998876554333 456789999999999999999999999999999888888886555444
Q ss_pred CeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcC-CCCEEEEEECCCeEEEEECCC
Q psy8748 1912 GFTSCAVSS-SGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSP-NGMALVTSSWDQFVKVWQESN 1983 (2004)
Q Consensus 1912 ~ItsLafSP-dG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSP-Dg~~LaSgS~DGtIrIWdlst 1983 (2004)
-+..-+|.- +..++++|++|+.|+||+..+|+++..+.||...|++++|+| +..++|+||+||+||||....
T Consensus 441 fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 441 FIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred eEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 455556655 558999999999999999999999999999999999999999 456799999999999998875
No 28
>KOG0645|consensus
Probab=99.96 E-value=2.3e-27 Score=265.43 Aligned_cols=288 Identities=23% Similarity=0.347 Sum_probs=245.4
Q ss_pred cccccccccccceeEEEEeCC-CCEEEEEeCCCeEEEEECCCCc---eEEEe-eCCCCceEEEEEecCCCEEEEeecCCe
Q psy8748 1683 MPKKSLKGHINKVNSVHYSGD-SRHCVSGSLDGKLIIWDTWTGN---KTQVI-PLRSAWVMSVAFAQSGNFVACGGMDNM 1757 (2004)
Q Consensus 1683 ~pi~sL~GHt~~VtsLaFSPD-G~~LASGS~DGtIrVWDl~Tgk---~l~ti-~~Ht~~ItsLafSPdg~~LaSGS~DGt 1757 (2004)
...+.+.||+++|..++|+|- |..||+||.|+.|++|+...+. +...+ .+|+..|++++|+|.|++|++|+.|.+
T Consensus 5 ~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t 84 (312)
T KOG0645|consen 5 ILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDAT 84 (312)
T ss_pred eeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccce
Confidence 346788999999999999997 8899999999999999987532 33333 469999999999999999999999999
Q ss_pred EEEEEcCCCCCCCcceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCcee--EEeeccccCCeEEEEECC
Q psy8748 1758 CTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRI--HEVAQAHIGDVVSISLSP 1834 (2004)
Q Consensus 1758 IrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i--~~il~~h~~~ItsLafSP 1834 (2004)
+.||.-..+ .++....+.||...|.+++|+ ++++|++++.|..|.+|.+..+... ..++..|...|..+.|||
T Consensus 85 ~~Iw~k~~~----efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHP 160 (312)
T KOG0645|consen 85 VVIWKKEDG----EFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHP 160 (312)
T ss_pred EEEeecCCC----ceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcC
Confidence 999986543 678899999999999999999 5667999999999999999855432 355789999999999999
Q ss_pred CCCEEEEEECCCeEEEEECC---CCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCC
Q psy8748 1835 DGQYFVTGSVDKSCKLWDFR---EKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNS 1911 (2004)
Q Consensus 1835 dg~~LaSGS~DGsIrIWDlr---s~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s 1911 (2004)
...+|++++.|++|++|+-. +..++.++.+|...|.+++|++.|..+++++.|++++||...+. ....+..
T Consensus 161 t~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~------~~~~~sr 234 (312)
T KOG0645|consen 161 TEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTD------LSGMHSR 234 (312)
T ss_pred CcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccC------cchhccc
Confidence 99999999999999999866 45789999999999999999999999999999999999986622 2234456
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEECCCCe------ee-EEEccCCCCeEEEEEcCC-CCEEEEEECCCeEEEEECC
Q psy8748 1912 GFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTT------HN-GVLSGHENRVTSISLSPN-GMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1912 ~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge------~l-~tL~gHs~~VtsLaFSPD-g~~LaSgS~DGtIrIWdls 1982 (2004)
.+..+.|. ...|++|+.|+.|++|.-.... .+ +.-..|...|+++.|.|. .++|++||+||.|++|.+.
T Consensus 235 ~~Y~v~W~--~~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 235 ALYDVPWD--NGVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred ceEeeeec--ccceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 78889998 5689999999999999765421 11 123569999999999994 7889999999999999875
No 29
>KOG0263|consensus
Probab=99.96 E-value=2.4e-28 Score=303.56 Aligned_cols=208 Identities=26% Similarity=0.453 Sum_probs=196.2
Q ss_pred ccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEc
Q psy8748 1684 PKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDL 1763 (2004)
Q Consensus 1684 pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl 1763 (2004)
..++|.||+++|..+.|+|+.++|++++.|+++|+|.+.+...+..+++|..+|.++.|+|.|-++++++.|++-++|..
T Consensus 443 ~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~ 522 (707)
T KOG0263|consen 443 TSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWST 522 (707)
T ss_pred eeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeec
Confidence 34569999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcceEEEEEecCccceeeeEEeCC-CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEE
Q psy8748 1764 NNRDSTGAAKVIRELLGYEGFLSSCRFIDD-TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTG 1842 (2004)
Q Consensus 1764 ~t~~~~~~~k~i~sl~gh~~~Vssvafsdd-~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSG 1842 (2004)
+. ....+.+.+|-..+.|+.|+++ +++++|+.|.+|++||+.+|..+ +++.+|.++|++++|+|+|++|++|
T Consensus 523 d~------~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~V-RiF~GH~~~V~al~~Sp~Gr~LaSg 595 (707)
T KOG0263|consen 523 DH------NKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSV-RIFTGHKGPVTALAFSPCGRYLASG 595 (707)
T ss_pred cc------CCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEE-EEecCCCCceEEEEEcCCCceEeec
Confidence 75 3667888999999999999965 57999999999999999999997 6678999999999999999999999
Q ss_pred ECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCC
Q psy8748 1843 SVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRAD 1898 (2004)
Q Consensus 1843 S~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtg 1898 (2004)
+.||.|.+||+.++..+..+.+|.+.|.++.|+.+|..|++|+.|.+|++||+..-
T Consensus 596 ~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 596 DEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred ccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 99999999999999999999999999999999999999999999999999998643
No 30
>KOG0266|consensus
Probab=99.96 E-value=1.2e-27 Score=301.78 Aligned_cols=292 Identities=28% Similarity=0.521 Sum_probs=260.7
Q ss_pred ccccccc-ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCc--eEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEE
Q psy8748 1685 KKSLKGH-INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGN--KTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVY 1761 (2004)
Q Consensus 1685 i~sL~GH-t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk--~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVW 1761 (2004)
...+.+| ...|.++.|+++|+++++++.|+.+++|+..+++ ..+.+.+|...|.+++|+|++.++++++.|++|++|
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriw 230 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIW 230 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEe
Confidence 4455554 8899999999999999999999999999998777 677778999999999999999999999999999999
Q ss_pred EcCCCCCCCcceEEEEEecCccceeeeEEeCCC-cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEE
Q psy8748 1762 DLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFV 1840 (2004)
Q Consensus 1762 Dl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~La 1840 (2004)
|+.. .....+.+.+|...+.+++|++.+ .+++|+.|++|++||++++++. ..+.+|.+.|++++|++++++++
T Consensus 231 d~~~-----~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~-~~l~~hs~~is~~~f~~d~~~l~ 304 (456)
T KOG0266|consen 231 DLKD-----DGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECV-RKLKGHSDGISGLAFSPDGNLLV 304 (456)
T ss_pred eccC-----CCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEE-EeeeccCCceEEEEECCCCCEEE
Confidence 9943 347788999999999999999655 7999999999999999998877 55689999999999999999999
Q ss_pred EEECCCeEEEEECCCCe--EEEEEecCCCC--eEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCC-CCeEE
Q psy8748 1841 TGSVDKSCKLWDFREKK--CVQTFFGHEAD--VNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKN-SGFTS 1915 (2004)
Q Consensus 1841 SGS~DGsIrIWDlrs~k--~I~tl~~h~s~--ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~-s~Its 1915 (2004)
+++.||.|++||+.++. ++..+.++... +++++|+|++.++++++.|+.+++||+..+.....+..+... ..+.+
T Consensus 305 s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~ 384 (456)
T KOG0266|consen 305 SASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFS 384 (456)
T ss_pred EcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCcceeEec
Confidence 99999999999999998 56677666555 999999999999999999999999999999998888655443 24455
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccC-CCCeEEEEEcCCCCEEEEEE--CCCeEEEEECC
Q psy8748 1916 CAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGH-ENRVTSISLSPNGMALVTSS--WDQFVKVWQES 1982 (2004)
Q Consensus 1916 LafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gH-s~~VtsLaFSPDg~~LaSgS--~DGtIrIWdls 1982 (2004)
...++.|.++++|+.|+.|++||..++..+..+.+| ...+..+++++...++++++ .|+.|++|..+
T Consensus 385 ~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 385 PTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred ccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecCC
Confidence 566789999999999999999999999999999999 89999999999999999998 79999999865
No 31
>KOG0284|consensus
Probab=99.96 E-value=6.5e-29 Score=288.97 Aligned_cols=282 Identities=23% Similarity=0.406 Sum_probs=245.6
Q ss_pred CCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCcc
Q psy8748 1554 CKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSSI 1633 (2004)
Q Consensus 1554 Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgSi 1633 (2004)
-+-+|..|.|.|+|+.|.+ |+..|.+.+|+..+ ..|
T Consensus 95 vkc~V~~v~WtPeGRRLlt-gs~SGEFtLWNg~~--------------------------------fnF----------- 130 (464)
T KOG0284|consen 95 VKCPVNVVRWTPEGRRLLT-GSQSGEFTLWNGTS--------------------------------FNF----------- 130 (464)
T ss_pred cccceeeEEEcCCCceeEe-ecccccEEEecCce--------------------------------eeH-----------
Confidence 4446999999999999999 99999999999755 011
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEeCC
Q psy8748 1634 NIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLD 1713 (2004)
Q Consensus 1634 di~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~D 1713 (2004)
...++.|..+|+++.|+++|.++++|+.+
T Consensus 131 ---------------------------------------------------EtilQaHDs~Vr~m~ws~~g~wmiSgD~g 159 (464)
T KOG0284|consen 131 ---------------------------------------------------ETILQAHDSPVRTMKWSHNGTWMISGDKG 159 (464)
T ss_pred ---------------------------------------------------HHHhhhhcccceeEEEccCCCEEEEcCCC
Confidence 11345699999999999999999999999
Q ss_pred CeEEEEECCCCceEEEeeC-CCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC
Q psy8748 1714 GKLIIWDTWTGNKTQVIPL-RSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID 1792 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~ti~~-Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd 1792 (2004)
|.|++|+..-. .+..+.. |...|++++|+|+...|++++.||+|+|||.... +..+.+.+|.-.+.++.|++
T Consensus 160 G~iKyWqpnmn-nVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~------kee~vL~GHgwdVksvdWHP 232 (464)
T KOG0284|consen 160 GMIKYWQPNMN-NVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMP------KEERVLRGHGWDVKSVDWHP 232 (464)
T ss_pred ceEEecccchh-hhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCC------chhheeccCCCCcceeccCC
Confidence 99999996443 3444444 5589999999999999999999999999999754 33455689999999999996
Q ss_pred C-CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEE
Q psy8748 1793 D-TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNS 1871 (2004)
Q Consensus 1793 d-~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~Its 1871 (2004)
. +.+++|+.|..|++||.+++.++.. ..+|+..|..+.|++++++|++++.|..++++|+++.+.+.++++|+..+++
T Consensus 233 ~kgLiasgskDnlVKlWDprSg~cl~t-lh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~ 311 (464)
T KOG0284|consen 233 TKGLIASGSKDNLVKLWDPRSGSCLAT-LHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTS 311 (464)
T ss_pred ccceeEEccCCceeEeecCCCcchhhh-hhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhhee
Confidence 5 5688999999999999999999854 4689999999999999999999999999999999988889999999999999
Q ss_pred EEEeC-CCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1872 VCFHP-SGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1872 IafSP-dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
+.|+| ...+|.+|+.||.|..|.+...+.+..+ ...|...|.+++|+|-|.+|++|+.|.++++|.-
T Consensus 312 ~~WhP~~~~lftsgg~Dgsvvh~~v~~~~p~~~i-~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r 379 (464)
T KOG0284|consen 312 LTWHPLNESLFTSGGSDGSVVHWVVGLEEPLGEI-PPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTR 379 (464)
T ss_pred eccccccccceeeccCCCceEEEeccccccccCC-CcccccceeeeeccccceeEeecCCCcceeeecc
Confidence 99999 5678999999999999999855555444 4678899999999999999999999999999975
No 32
>KOG0273|consensus
Probab=99.96 E-value=1.2e-27 Score=282.33 Aligned_cols=296 Identities=23% Similarity=0.369 Sum_probs=253.9
Q ss_pred ccccccccccceeEEEEeCCCC-EEEEEeCCCeEEEEECCCC--c--eEEEee----------CCCCceEEEEEecCCCE
Q psy8748 1684 PKKSLKGHINKVNSVHYSGDSR-HCVSGSLDGKLIIWDTWTG--N--KTQVIP----------LRSAWVMSVAFAQSGNF 1748 (2004)
Q Consensus 1684 pi~sL~GHt~~VtsLaFSPDG~-~LASGS~DGtIrVWDl~Tg--k--~l~ti~----------~Ht~~ItsLafSPdg~~ 1748 (2004)
..+.+. |+.+|.+.+|+|-.. .+++|+.|-..++|++... . ....++ ..+..|++++|+.+|..
T Consensus 171 ~~kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~ 249 (524)
T KOG0273|consen 171 KAKVLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTL 249 (524)
T ss_pred ceeecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCe
Confidence 344555 999999999999666 8999999999999998741 1 111111 12356999999999999
Q ss_pred EEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCe
Q psy8748 1749 VACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDV 1827 (2004)
Q Consensus 1749 LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~I 1827 (2004)
|++|+.||.+++|+... .....+..|.++|.++.|. .++++++++.||++.+||..++.....+ .-|..+-
T Consensus 250 LatG~~~G~~riw~~~G-------~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f-~~~s~~~ 321 (524)
T KOG0273|consen 250 LATGSEDGEARIWNKDG-------NLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQF-EFHSAPA 321 (524)
T ss_pred EEEeecCcEEEEEecCc-------hhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEee-eeccCCc
Confidence 99999999999999854 5567788899999999999 5668999999999999999999877444 4566665
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCC
Q psy8748 1828 VSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPP 1907 (2004)
Q Consensus 1828 tsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~ 1907 (2004)
..+.|-. ...|++.+.||.|+++.+....++.++.+|.++|.++.|.|.|..|++++.|++++||++........+ .
T Consensus 322 lDVdW~~-~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l--~ 398 (524)
T KOG0273|consen 322 LDVDWQS-NDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDL--Q 398 (524)
T ss_pred cceEEec-CceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhh--h
Confidence 6788864 456899999999999999999999999999999999999999999999999999999999887777666 4
Q ss_pred CCCCCeEEEEEcCCC---------CEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEE
Q psy8748 1908 NKNSGFTSCAVSSSG---------RYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKV 1978 (2004)
Q Consensus 1908 ~~~s~ItsLafSPdG---------~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrI 1978 (2004)
.|...|..+.|+|.| ..+++++.|++|++||+..+.++..+..|..+|.+++|+|+|+++|+|+.||.|.+
T Consensus 399 ~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~i 478 (524)
T KOG0273|consen 399 AHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHI 478 (524)
T ss_pred hhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEe
Confidence 666789999999964 46899999999999999999999999999999999999999999999999999999
Q ss_pred EECCCCeEEEEEE
Q psy8748 1979 WQESNTIVWKVLK 1991 (2004)
Q Consensus 1979 Wdlstg~l~k~Ik 1991 (2004)
|+...++.++..+
T Consensus 479 ws~~~~~l~~s~~ 491 (524)
T KOG0273|consen 479 WSTKTGKLVKSYQ 491 (524)
T ss_pred ccccchheeEeec
Confidence 9999986655443
No 33
>KOG0282|consensus
Probab=99.96 E-value=6.9e-29 Score=294.10 Aligned_cols=290 Identities=21% Similarity=0.430 Sum_probs=249.5
Q ss_pred cccccccccccceeEEEEeC-CCCEEEEEeCCCeEEEEECCC-CceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEE
Q psy8748 1683 MPKKSLKGHINKVNSVHYSG-DSRHCVSGSLDGKLIIWDTWT-GNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTV 1760 (2004)
Q Consensus 1683 ~pi~sL~GHt~~VtsLaFSP-DG~~LASGS~DGtIrVWDl~T-gk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrV 1760 (2004)
..++.+.||+.+|+++.|.| .+.+|++||.|+.|+||++.. +++++++.+|..+|.+++|+++|..+++++.|+.+++
T Consensus 205 k~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKl 284 (503)
T KOG0282|consen 205 KLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKL 284 (503)
T ss_pred hheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeee
Confidence 34568999999999999999 888999999999999999887 8999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCcceEEEEEecCccceeeeEEeCCC--cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCE
Q psy8748 1761 YDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT--TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQY 1838 (2004)
Q Consensus 1761 WDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~--~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~ 1838 (2004)
||++++. +... ......+.|+.|.+++ .+++|+.|+.|+.||+++++.+.. ...|-+.|..+.|-++|++
T Consensus 285 wDtETG~------~~~~-f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqe-Yd~hLg~i~~i~F~~~g~r 356 (503)
T KOG0282|consen 285 WDTETGQ------VLSR-FHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQE-YDRHLGAILDITFVDEGRR 356 (503)
T ss_pred eccccce------EEEE-EecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHH-HHhhhhheeeeEEccCCce
Confidence 9999764 2222 2335667888888554 699999999999999999997744 4788999999999999999
Q ss_pred EEEEECCCeEEEEECCCCeEEEEEe-cCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCce---eEEEcCCCCCCCeE
Q psy8748 1839 FVTGSVDKSCKLWDFREKKCVQTFF-GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQ---IATYLPPNKNSGFT 1914 (2004)
Q Consensus 1839 LaSGS~DGsIrIWDlrs~k~I~tl~-~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~---i~t~~~~~~~s~It 1914 (2004)
+++.+.|++++||+.+.+..++... .+.....|+..+|+++++++-+.|+.|.+|.+...-. ...+..+...+.-.
T Consensus 357 FissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~ 436 (503)
T KOG0282|consen 357 FISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSC 436 (503)
T ss_pred EeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCcee
Confidence 9999999999999999877665443 2334577899999999999999999999998753222 22333333345567
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCC-CCEEEEEECCCeEEEEE
Q psy8748 1915 SCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPN-GMALVTSSWDQFVKVWQ 1980 (2004)
Q Consensus 1915 sLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPD-g~~LaSgS~DGtIrIWd 1980 (2004)
.+.|||||++|++|+.||.+.+||.++.+.+..+++|.+.+..+.|+|. ...+|+||.||.|++|+
T Consensus 437 ~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 437 QVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred eEEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 8999999999999999999999999999999999999999999999995 45799999999999996
No 34
>KOG0263|consensus
Probab=99.96 E-value=7.3e-28 Score=299.22 Aligned_cols=249 Identities=30% Similarity=0.553 Sum_probs=227.6
Q ss_pred CCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCC-------------------------CCCcceEEEEEecCccceee
Q psy8748 1733 RSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRD-------------------------STGAAKVIRELLGYEGFLSS 1787 (2004)
Q Consensus 1733 Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~-------------------------~~~~~k~i~sl~gh~~~Vss 1787 (2004)
....++|..|++++..+|.|..|..|++|.+...+ ........+.+.+|.++|..
T Consensus 377 t~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg 456 (707)
T KOG0263|consen 377 TYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYG 456 (707)
T ss_pred cCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceee
Confidence 34568999999999999999999999999987411 01122345668999999999
Q ss_pred eEEeCCC-cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCC
Q psy8748 1788 CRFIDDT-TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHE 1866 (2004)
Q Consensus 1788 vafsdd~-~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~ 1866 (2004)
+.|++++ .+++++.|+++++|.+.+..++... .+|..+|+++.|+|-|-+|++++.|++.++|......+.+.+.+|-
T Consensus 457 ~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y-~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghl 535 (707)
T KOG0263|consen 457 CSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIY-KGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHL 535 (707)
T ss_pred eeecccccceeeccCCcceeeeecccceeEEEe-cCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccc
Confidence 9999765 5888999999999999999888544 6999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeE
Q psy8748 1867 ADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNG 1946 (2004)
Q Consensus 1867 s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~ 1946 (2004)
+.|.|+.|+|++.|+++||.|.+|++||+.+|..++.| .+|..+|++++|+|+|++|++|+.||.|.+||+.++..+.
T Consensus 536 sDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF--~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~ 613 (707)
T KOG0263|consen 536 SDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIF--TGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVK 613 (707)
T ss_pred cccceEEECCcccccccCCCCceEEEEEcCCCcEEEEe--cCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchh
Confidence 99999999999999999999999999999999999999 4688999999999999999999999999999999999999
Q ss_pred EEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1947 VLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1947 tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
.+.+|++.|.++.|+.+|..||+||.|.+|++||+...
T Consensus 614 ~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 614 QLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred hhhcccCceeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 99999999999999999999999999999999998764
No 35
>KOG0266|consensus
Probab=99.96 E-value=7e-27 Score=294.84 Aligned_cols=285 Identities=27% Similarity=0.448 Sum_probs=247.6
Q ss_pred CCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCcc
Q psy8748 1554 CKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSSI 1633 (2004)
Q Consensus 1554 Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgSi 1633 (2004)
|...|+++.|||+|++|++ ++.|+.+++|+... .+.
T Consensus 158 ~~~sv~~~~fs~~g~~l~~-~~~~~~i~~~~~~~-------------~~~------------------------------ 193 (456)
T KOG0266|consen 158 ECPSVTCVDFSPDGRALAA-ASSDGLIRIWKLEG-------------IKS------------------------------ 193 (456)
T ss_pred ccCceEEEEEcCCCCeEEE-ccCCCcEEEeeccc-------------ccc------------------------------
Confidence 4778999999999999999 99999999999855 000
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEeCC
Q psy8748 1634 NIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLD 1713 (2004)
Q Consensus 1634 di~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~D 1713 (2004)
...+.+.+|...|++++|+|+++++++|+.|
T Consensus 194 -------------------------------------------------~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D 224 (456)
T KOG0266|consen 194 -------------------------------------------------NLLRELSGHTRGVSDVAFSPDGSYLLSGSDD 224 (456)
T ss_pred -------------------------------------------------hhhccccccccceeeeEECCCCcEEEEecCC
Confidence 0123446799999999999999999999999
Q ss_pred CeEEEEEC-CCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC
Q psy8748 1714 GKLIIWDT-WTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID 1792 (2004)
Q Consensus 1714 GtIrVWDl-~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd 1792 (2004)
++|+|||+ ..+..++++.+|...|++++|+|+++.+++|+.|++|++||+++ .+....+.+|.+.+++++|..
T Consensus 225 ~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~------~~~~~~l~~hs~~is~~~f~~ 298 (456)
T KOG0266|consen 225 KTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRT------GECVRKLKGHSDGISGLAFSP 298 (456)
T ss_pred ceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccC------CeEEEeeeccCCceEEEEECC
Confidence 99999999 55689999999999999999999999999999999999999985 478889999999999999995
Q ss_pred -CCcEEEeecCCeEEEEECCCCce--eEEeeccccC--CeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCC
Q psy8748 1793 -DTTLLTGSGDMKIVTWNLETGQR--IHEVAQAHIG--DVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEA 1867 (2004)
Q Consensus 1793 -d~~LlSgS~DGtI~IWDl~tg~~--i~~il~~h~~--~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s 1867 (2004)
+..+++++.||.|++||..++.. .... .++.. .+++++|+|++.++++++.|+.+++||++.+.....+.+|..
T Consensus 299 d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~ 377 (456)
T KOG0266|consen 299 DGNLLVSASYDGTIRVWDLETGSKLCLKLL-SGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSN 377 (456)
T ss_pred CCCEEEEcCCCccEEEEECCCCceeeeecc-cCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCC
Confidence 45688888899999999999983 3333 33333 599999999999999999999999999999999999998887
Q ss_pred C---eEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEe--CCCeEEEEEC
Q psy8748 1868 D---VNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGS--DDNNVHVWDL 1939 (2004)
Q Consensus 1868 ~---ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGS--sDGsIrIWDL 1939 (2004)
. +.+...++.+.++++|+.|+.|.+||+.++..+..+..+. ...+..+.+++..+++++++ .|+.+++|..
T Consensus 378 ~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~-~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~ 453 (456)
T KOG0266|consen 378 LVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHS-KAAVSDLSSHPTENLIASSSFEGDGLIRLWKY 453 (456)
T ss_pred cceeEecccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCC-CCceeccccCCCcCeeeecCcCCCceEEEecC
Confidence 5 3344557789999999999999999999988777774432 67889999999999999998 6899999975
No 36
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=2.8e-26 Score=307.58 Aligned_cols=240 Identities=18% Similarity=0.292 Sum_probs=202.8
Q ss_pred ccceeEEEEeC-CCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEec-CCCEEEEeecCCeEEEEEcCCCCCC
Q psy8748 1692 INKVNSVHYSG-DSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQ-SGNFVACGGMDNMCTVYDLNNRDST 1769 (2004)
Q Consensus 1692 t~~VtsLaFSP-DG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSP-dg~~LaSGS~DGtIrVWDl~t~~~~ 1769 (2004)
...|.+++|++ ++.+|++++.||+|++||+.+++.+..+.+|.+.|++++|+| ++.+|++|+.||.|++||+..+.
T Consensus 532 ~~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~-- 609 (793)
T PLN00181 532 RSKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGV-- 609 (793)
T ss_pred cCceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCc--
Confidence 35789999987 578999999999999999999999999999999999999997 78999999999999999997642
Q ss_pred CcceEEEEEecCccceeeeEEe--CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCe
Q psy8748 1770 GAAKVIRELLGYEGFLSSCRFI--DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKS 1847 (2004)
Q Consensus 1770 ~~~k~i~sl~gh~~~Vssvafs--dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGs 1847 (2004)
....+.. ...+.++.|. ++..+++|+.||.|++||++++........+|...|.++.|. ++.++++++.||.
T Consensus 610 ----~~~~~~~-~~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ 683 (793)
T PLN00181 610 ----SIGTIKT-KANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNT 683 (793)
T ss_pred ----EEEEEec-CCCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCE
Confidence 3333433 3567888885 356799999999999999988764334556899999999997 7889999999999
Q ss_pred EEEEECCC------CeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcC-----------CCCC
Q psy8748 1848 CKLWDFRE------KKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLP-----------PNKN 1910 (2004)
Q Consensus 1848 IrIWDlrs------~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~-----------~~~~ 1910 (2004)
|++||++. ...+..+.+|...+.+++|++++.+|++|+.||.|++|+.........+.. ..+.
T Consensus 684 ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 763 (793)
T PLN00181 684 LKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDAS 763 (793)
T ss_pred EEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCC
Confidence 99999974 356788899999999999999999999999999999999876654433211 2234
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1911 SGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1911 s~ItsLafSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
..|.+++|++++.++++|+.||.|+||++
T Consensus 764 ~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 764 QFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred cEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 56899999999999999999999999996
No 37
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96 E-value=3.5e-26 Score=306.71 Aligned_cols=283 Identities=18% Similarity=0.294 Sum_probs=235.7
Q ss_pred cccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCC----c----eEEEeeCCCCceEEEEEec-CCCEEEEeecCCe
Q psy8748 1687 SLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTG----N----KTQVIPLRSAWVMSVAFAQ-SGNFVACGGMDNM 1757 (2004)
Q Consensus 1687 sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tg----k----~l~ti~~Ht~~ItsLafSP-dg~~LaSGS~DGt 1757 (2004)
.+.+|.+.|++++|+|+|+++|+|+.||.|+|||..+. . ....+. +...|.+++|++ ++.++++++.||.
T Consensus 478 ~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~ 556 (793)
T PLN00181 478 DLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGV 556 (793)
T ss_pred cccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCe
Confidence 35669999999999999999999999999999997542 1 112223 346799999987 4789999999999
Q ss_pred EEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC--CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEEC-C
Q psy8748 1758 CTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID--DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLS-P 1834 (2004)
Q Consensus 1758 IrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd--d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafS-P 1834 (2004)
|++||+.++ .....+.+|.+.|.++.|++ +..+++|+.||.|++||+.++..+..+. +...+.++.|+ +
T Consensus 557 v~lWd~~~~------~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~--~~~~v~~v~~~~~ 628 (793)
T PLN00181 557 VQVWDVARS------QLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIK--TKANICCVQFPSE 628 (793)
T ss_pred EEEEECCCC------eEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEe--cCCCeEEEEEeCC
Confidence 999999753 45677788999999999984 4679999999999999999988775552 34679999995 5
Q ss_pred CCCEEEEEECCCeEEEEECCCCe-EEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCC------ceeEEEcCC
Q psy8748 1835 DGQYFVTGSVDKSCKLWDFREKK-CVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRAD------QQIATYLPP 1907 (2004)
Q Consensus 1835 dg~~LaSGS~DGsIrIWDlrs~k-~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtg------k~i~t~~~~ 1907 (2004)
+|.++++|+.||.|++||+++.. .+..+.+|...|.++.|. ++.++++++.||+|++||++.+ +.+..+ .
T Consensus 629 ~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~--~ 705 (793)
T PLN00181 629 SGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSF--M 705 (793)
T ss_pred CCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEE--c
Confidence 79999999999999999998765 467778999999999997 6789999999999999999753 344555 3
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEE-------------ccCCCCeEEEEEcCCCCEEEEEECCC
Q psy8748 1908 NKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVL-------------SGHENRVTSISLSPNGMALVTSSWDQ 1974 (2004)
Q Consensus 1908 ~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL-------------~gHs~~VtsLaFSPDg~~LaSgS~DG 1974 (2004)
+|...+.+++|++++.+|++|+.||.|++|+.....+...+ ..|...|.+++|++++..|++|+.||
T Consensus 706 gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG 785 (793)
T PLN00181 706 GHTNVKNFVGLSVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTG 785 (793)
T ss_pred CCCCCeeEEEEcCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCC
Confidence 56677899999999999999999999999998665443222 23456799999999999999999999
Q ss_pred eEEEEEC
Q psy8748 1975 FVKVWQE 1981 (2004)
Q Consensus 1975 tIrIWdl 1981 (2004)
.|+||++
T Consensus 786 ~I~i~~~ 792 (793)
T PLN00181 786 NIKILEM 792 (793)
T ss_pred cEEEEec
Confidence 9999986
No 38
>KOG0285|consensus
Probab=99.96 E-value=2.8e-27 Score=271.04 Aligned_cols=287 Identities=21% Similarity=0.340 Sum_probs=255.5
Q ss_pred CCCCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccC
Q psy8748 1549 NAPEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMK 1628 (2004)
Q Consensus 1549 ~a~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~s 1628 (2004)
.+..+|-+.|+||++.|-.+|++| |+.|++|+|||+.+ +.
T Consensus 145 rVi~gHlgWVr~vavdP~n~wf~t-gs~DrtikIwDlat-------------g~-------------------------- 184 (460)
T KOG0285|consen 145 RVISGHLGWVRSVAVDPGNEWFAT-GSADRTIKIWDLAT-------------GQ-------------------------- 184 (460)
T ss_pred hhhhhccceEEEEeeCCCceeEEe-cCCCceeEEEEccc-------------Ce--------------------------
Confidence 345569999999999999999999 99999999999988 22
Q ss_pred CCCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEE
Q psy8748 1629 PTSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCV 1708 (2004)
Q Consensus 1629 pdgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LA 1708 (2004)
.+.+|.||...|..+++|+-..|++
T Consensus 185 -------------------------------------------------------LkltltGhi~~vr~vavS~rHpYlF 209 (460)
T KOG0285|consen 185 -------------------------------------------------------LKLTLTGHIETVRGVAVSKRHPYLF 209 (460)
T ss_pred -------------------------------------------------------EEEeecchhheeeeeeecccCceEE
Confidence 1345677999999999999999999
Q ss_pred EEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeee
Q psy8748 1709 SGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSC 1788 (2004)
Q Consensus 1709 SGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssv 1788 (2004)
+++.|+.|+.||++..+.++.+.+|-..|+|++.+|.-+.|++|+.|..++|||+++. ..+..+.||...|..+
T Consensus 210 s~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr------~~V~~l~GH~~~V~~V 283 (460)
T KOG0285|consen 210 SAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTR------ASVHVLSGHTNPVASV 283 (460)
T ss_pred EecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeeccc------ceEEEecCCCCcceeE
Confidence 9999999999999999999999999999999999999999999999999999999864 5677889999999999
Q ss_pred EEeC-CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCC
Q psy8748 1789 RFID-DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEA 1867 (2004)
Q Consensus 1789 afsd-d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s 1867 (2004)
.+.+ +..+++|+.|++|++||+..|+.... ...|...+.+++.+|....|++++.| .|+-|++..+..+..+.+|..
T Consensus 284 ~~~~~dpqvit~S~D~tvrlWDl~agkt~~t-lt~hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsgh~~ 361 (460)
T KOG0285|consen 284 MCQPTDPQVITGSHDSTVRLWDLRAGKTMIT-LTHHKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSGHNA 361 (460)
T ss_pred EeecCCCceEEecCCceEEEeeeccCceeEe-eecccceeeEEecCCchhhhhccCCc-cceeccCCccchhhccccccc
Confidence 8874 66899999999999999999988744 46889999999999999999999877 699999999999999999999
Q ss_pred CeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEc---CC---CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1868 DVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYL---PP---NKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1868 ~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~---~~---~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
-|++++...|| ++++|+.+|.+.+||.++|....... .+ ....+|.+.+|+..|..|++|..|.+|++|.-
T Consensus 362 iintl~~nsD~-v~~~G~dng~~~fwdwksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~ke 438 (460)
T KOG0285|consen 362 IINTLSVNSDG-VLVSGGDNGSIMFWDWKSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYKE 438 (460)
T ss_pred eeeeeeeccCc-eEEEcCCceEEEEEecCcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEec
Confidence 99999998877 78899999999999999887655441 11 12356899999999999999999999999974
No 39
>KOG0306|consensus
Probab=99.96 E-value=1e-26 Score=284.95 Aligned_cols=386 Identities=20% Similarity=0.266 Sum_probs=307.0
Q ss_pred CCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccc-cCCCCcch
Q psy8748 1556 EQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLM-MKPTSSIN 1634 (2004)
Q Consensus 1556 ~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll-~spdgSid 1634 (2004)
..|+|+.-+|++-.||. |-.||.|+||+..+ ....-++.||..++.. ..|...- .-..|+.+
T Consensus 66 ~evt~l~~~~d~l~lAV-GYaDGsVqif~~~s-------------~~~~~tfngHK~AVt~---l~fd~~G~rlaSGskD 128 (888)
T KOG0306|consen 66 AEVTCLRSSDDILLLAV-GYADGSVQIFSLES-------------EEILITFNGHKAAVTT---LKFDKIGTRLASGSKD 128 (888)
T ss_pred ceEEEeeccCCcceEEE-EecCceEEeeccCC-------------CceeeeecccccceEE---EEEcccCceEeecCCC
Confidence 47999999999999998 99999999999987 3455566676666654 1110000 00011111
Q ss_pred hhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEeCCC
Q psy8748 1635 IYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDG 1714 (2004)
Q Consensus 1635 i~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DG 1714 (2004)
..+..|. . +.-.-...|+||.+.|+..-|..+.+++++.|.|+
T Consensus 129 t~IIvwD----------------------------l---------V~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs 171 (888)
T KOG0306|consen 129 TDIIVWD----------------------------L---------VGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDS 171 (888)
T ss_pred ccEEEEE----------------------------e---------ccceeeEEeecchHHHhHHhccCCCeEEEEeccCc
Confidence 2112220 0 01123567999999999999999889999999999
Q ss_pred eEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCC--------------------------
Q psy8748 1715 KLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDS-------------------------- 1768 (2004)
Q Consensus 1715 tIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~-------------------------- 1768 (2004)
.|++||+.+..+..+.-.|.+.|.++++++ +.+++++.|+.+++|++.....
T Consensus 172 ~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~--~~lvt~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~ 249 (888)
T KOG0306|consen 172 MIKFWDLETQHCFETHVDHRGEIWALVLDE--KLLVTAGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREIN 249 (888)
T ss_pred eEEEEecccceeeeEEecccceEEEEEEec--ceEEEEecCCceEEEEeecccccccccccceeeccceeeeccCCceeE
Confidence 999999999999999999999999999986 8999999999999999811000
Q ss_pred ---------------------------------------------C----------------------------------
Q psy8748 1769 ---------------------------------------------T---------------------------------- 1769 (2004)
Q Consensus 1769 ---------------------------------------------~---------------------------------- 1769 (2004)
.
T Consensus 250 l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~ 329 (888)
T KOG0306|consen 250 LVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKKLKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVT 329 (888)
T ss_pred EeecCcccEEEEecchhhhhheeecCHHHHHHHHHHHHHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEE
Confidence 0
Q ss_pred ---Ccc-------------------e---------EEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEE
Q psy8748 1770 ---GAA-------------------K---------VIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHE 1818 (2004)
Q Consensus 1770 ---~~~-------------------k---------~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~ 1818 (2004)
... . ....+.+|...|..+++++++.++..+..+.+++|+..+.+++.+
T Consensus 330 ~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~i~~~GHR~dVRsl~vS~d~~~~~Sga~~SikiWn~~t~kciRT 409 (888)
T KOG0306|consen 330 PSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSNIEIGGHRSDVRSLCVSSDSILLASGAGESIKIWNRDTLKCIRT 409 (888)
T ss_pred ecCCcceeEEEeecCceEEEEeccCCCCCccccccceeeeccchhheeEEEeecCceeeeecCCCcEEEEEccCcceeEE
Confidence 000 0 002234677778888888888888888899999999999999977
Q ss_pred eeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccC-
Q psy8748 1819 VAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRA- 1897 (2004)
Q Consensus 1819 il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrt- 1897 (2004)
+. .+.+.+..|-|.++++++|...|.+.+||+.+...+.++.+|.+.|+.++.+||+..+++||.|.+|++||..-
T Consensus 410 i~---~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~ 486 (888)
T KOG0306|consen 410 IT---CGYILASKFVPGDRYIVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLV 486 (888)
T ss_pred ec---cccEEEEEecCCCceEEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEE
Confidence 73 33789999999999999999999999999999999999999999999999999999999999999999999742
Q ss_pred ----CceeEEEcC-----CCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEE
Q psy8748 1898 ----DQQIATYLP-----PNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALV 1968 (2004)
Q Consensus 1898 ----gk~i~t~~~-----~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~La 1968 (2004)
+.....+.. -.-...|.|+.+||||+++++|--|++++||-+.+.+..-.+.||.-+|.++.++||++.++
T Consensus 487 ~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSkliv 566 (888)
T KOG0306|consen 487 VSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIV 566 (888)
T ss_pred eccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEE
Confidence 111110100 11235689999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCCeEEEEECCCCeEEEEEEeecCCCCccccc
Q psy8748 1969 TSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003 (2004)
Q Consensus 1969 SgS~DGtIrIWdlstg~l~k~Ik~~~~h~~~VtsV 2003 (2004)
|||.|..|+||-++=|.+ -+.+-+|...|+||
T Consensus 567 TgSADKnVKiWGLdFGDC---HKS~fAHdDSvm~V 598 (888)
T KOG0306|consen 567 TGSADKNVKIWGLDFGDC---HKSFFAHDDSVMSV 598 (888)
T ss_pred eccCCCceEEeccccchh---hhhhhcccCceeEE
Confidence 999999999999998854 45566788888775
No 40
>KOG0295|consensus
Probab=99.95 E-value=5.1e-27 Score=270.62 Aligned_cols=289 Identities=25% Similarity=0.363 Sum_probs=258.3
Q ss_pred CCCCCCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccc
Q psy8748 1547 PTNAPEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLM 1626 (2004)
Q Consensus 1547 pt~a~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll 1626 (2004)
.....++|..+|+.+-|+|+--.+|+ ++.|++|++||..+ +.
T Consensus 100 l~~~l~g~r~~vt~v~~hp~~~~v~~-as~d~tikv~D~~t-------------g~------------------------ 141 (406)
T KOG0295|consen 100 LVQKLAGHRSSVTRVIFHPSEALVVS-ASEDATIKVFDTET-------------GE------------------------ 141 (406)
T ss_pred chhhhhccccceeeeeeccCceEEEE-ecCCceEEEEEccc-------------hh------------------------
Confidence 34445568889999999999999999 99999999999877 11
Q ss_pred cCCCCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCE
Q psy8748 1627 MKPTSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRH 1706 (2004)
Q Consensus 1627 ~spdgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~ 1706 (2004)
....|+||++.|.+++|+..|++
T Consensus 142 ---------------------------------------------------------~e~~LrGHt~sv~di~~~a~Gk~ 164 (406)
T KOG0295|consen 142 ---------------------------------------------------------LERSLRGHTDSVFDISFDASGKY 164 (406)
T ss_pred ---------------------------------------------------------hhhhhhccccceeEEEEecCccE
Confidence 12357889999999999999999
Q ss_pred EEEEeCCCeEEEEECCC-CceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccce
Q psy8748 1707 CVSGSLDGKLIIWDTWT-GNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFL 1785 (2004)
Q Consensus 1707 LASGS~DGtIrVWDl~T-gk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~V 1785 (2004)
+|+++.|-.+++||..+ .++++...+|...|.+++|-|.|+++++++.|.+|+.|+++++ ..+.++.+|...+
T Consensus 165 l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg------~cv~t~~~h~ewv 238 (406)
T KOG0295|consen 165 LATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTG------YCVKTFPGHSEWV 238 (406)
T ss_pred EEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccc------eeEEeccCchHhE
Confidence 99999999999999887 5777888899999999999999999999999999999999865 6788999999999
Q ss_pred eeeEEeCCC-cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCC---------------CCEEEEEECCCeEE
Q psy8748 1786 SSCRFIDDT-TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPD---------------GQYFVTGSVDKSCK 1849 (2004)
Q Consensus 1786 ssvafsdd~-~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPd---------------g~~LaSGS~DGsIr 1849 (2004)
..+....++ .+++++.|.++++|-..++++. ..+..|..+|.|++|.|. +.++.+++.|++|+
T Consensus 239 r~v~v~~DGti~As~s~dqtl~vW~~~t~~~k-~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk 317 (406)
T KOG0295|consen 239 RMVRVNQDGTIIASCSNDQTLRVWVVATKQCK-AELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIK 317 (406)
T ss_pred EEEEecCCeeEEEecCCCceEEEEEeccchhh-hhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEE
Confidence 999988554 5778899999999999998766 445789999999999772 25899999999999
Q ss_pred EEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEe
Q psy8748 1850 LWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGS 1929 (2004)
Q Consensus 1850 IWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGS 1929 (2004)
+||+.++.++.++.+|...|..++|+|.|+||+++..|+++++||+++++++..+. .|..-++++.|+.+..++++|+
T Consensus 318 ~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~--ah~hfvt~lDfh~~~p~VvTGs 395 (406)
T KOG0295|consen 318 IWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLE--AHEHFVTSLDFHKTAPYVVTGS 395 (406)
T ss_pred EEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccC--CCcceeEEEecCCCCceEEecc
Confidence 99999999999999999999999999999999999999999999999999998885 4556799999999999999999
Q ss_pred CCCeEEEEEC
Q psy8748 1930 DDNNVHVWDL 1939 (2004)
Q Consensus 1930 sDGsIrIWDL 1939 (2004)
-|.++++|.-
T Consensus 396 Vdqt~KvwEc 405 (406)
T KOG0295|consen 396 VDQTVKVWEC 405 (406)
T ss_pred ccceeeeeec
Confidence 9999999974
No 41
>COG5221 DOP1 Dopey and related predicted leucine zipper transcription factors [Transcription]
Probab=99.95 E-value=9.8e-28 Score=298.15 Aligned_cols=484 Identities=14% Similarity=0.125 Sum_probs=340.5
Q ss_pred chhHHHHHHHhhccCCCCc-chhhhHHHHhhhccccccchhhhHHHHHHHHHHHHHHHHHHHhccccccccCCCCChHHH
Q psy8748 874 QPMFLCALARALESNPGLR-ASHQHWTTMLTCALPYLGKSLTTVVKVAIKALCANVDYLAEVYSVQNENKLKTNIPADYA 952 (2004)
Q Consensus 874 ~~~fl~~ll~gL~~~~~~~-~~~~~W~~~l~~~LP~~~~sl~~~v~~~v~qlC~~i~~l~~~~~~~~~~~~~~~~p~~~~ 952 (2004)
-.|++.-++.+..-.-.+. ....+.+-++.+.+-|++.++|+++.+++..+-...+.+-..+. .....-.|-+..
T Consensus 906 h~~lv~flv~~~~ndg~sp~~~I~k~l~lL~~~~~l~~~sifr~~~~~~~S~i~~v~~~~l~~p----~~v~~yapv~~~ 981 (1618)
T COG5221 906 HRMLVHFLVNRKENDGRSPDMEIIKILELLVRGGILSGSSIFRVMNSVDLSRIVDVAKENLDDP----AIVLGYAPVIKH 981 (1618)
T ss_pred HHHHHHHHhhhhhccCCCcchHHHHHHHHHHhccchhcccHHHHHhhhHHHHHHHHHHHhccCc----ccccCchhHHHH
Confidence 3577777777665431222 46778999999999999999999999999987555554333222 112233677888
Q ss_pred HHHHHHHHHHHHhhhcCCCCCCCCCCCCccccccccccccccccccccCCC--CCCccccceeeeecCCCC--Ccccccc
Q psy8748 953 ITQMEALTILCHYCLLDSAQPFNQPLHGNVMYHVSEKYNKSLKDISSKANN--VGKSGKKIVAVTSLSSGD--NQCVTEK 1028 (2004)
Q Consensus 953 itlLegl~~i~H~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~~~~f~n~v~~~~~s~~~--~~~~~~~ 1028 (2004)
+.=|++|--+||--|+..+.- +. -++.+ ..++.+|.|++||.|+.- ....+.|
T Consensus 982 ~g~l~~l~el~s~~l~~~~y~-~~----------------------f~~snl~~~~~i~~V~SnVfss~sSneeskiq~r 1038 (1618)
T COG5221 982 SGNLAALQELCSILLSQCFYY-HS----------------------FLESNLSLTRLIRKVMSNVFSSLSSNEESKIQNR 1038 (1618)
T ss_pred hccHHHHHHHHHHHHHhhhcc-cC----------------------chhccccHHHHHHHHHHHhhhccccCcccchhhh
Confidence 888888888899877764332 11 11222 348999999999998851 1112222
Q ss_pred hhhhhhchhhhHHHHhh---hHhH------------Hh----hhhh---------------hhcccCcccccc--chhhh
Q psy8748 1029 KRVNQNIYHDGIDTYTT---YSKN------------LS----LLQN---------------ISVFVNPFSTDN--STSMM 1072 (2004)
Q Consensus 1029 ~~vaR~~L~~i~~~~~~---w~~~------------i~----~~~~---------------il~~l~p~~~~~--~~~~l 1072 (2004)
+.- =-..-+.++++-+ |.-. +. .|.+ |++.+--|..|. .....
T Consensus 1039 d~~-L~~~~~ai~~~ll~~~wh~i~~~~~Dkssk~~~nnSy~fk~~s~~llee~~~~Eple~~e~l~~i~~~n~~t~~~~ 1117 (1618)
T COG5221 1039 DFG-LMIVSEAITSMLLKRGWHGILPAFIDKSSKFIFNNSYFFKNQSVDLLEEERGREPLEIAEMLQGIEHHNALTLSSS 1117 (1618)
T ss_pred HHH-HHHHHHHHHHHHHHHhhccccchhcchhHHHHhcchHHHHHHHHHHHHHHhcCCHHHHHHHHHHHhhccceeEEee
Confidence 200 0003334444444 5411 00 0111 111121111111 11122
Q ss_pred hccccccccccccCCCCccccccccCCcchHHHHH---------HHHHcCCCCCCCC--------------CcccHHHHH
Q psy8748 1073 NNDFDDYFVEEKKDGTSTTSTELIAMPIDTLVQTI---------HQVIRSTTINMEP--------------SMRMEVSVL 1129 (2004)
Q Consensus 1073 ~al~~~~~W~~~~~~~~~~s~~i~~l~~dti~~~~---------~~v~~~~~~~~~~--------------~~~~e~~Ll 1129 (2004)
+-+ ++..|.. ++++.+ .+-|+++++++-- +-..-..+.
T Consensus 1118 ~~l------~~~~p~~-------------~V~~l~~~~~~r~~~~as~~~~~~~~~~~t~l~~~~c~p~~~sr~~gE~i~ 1178 (1618)
T COG5221 1118 TCL------QEEAPRT-------------SVRILALKLSTRKELSASLFRKVPIKFVETILEGSPCIPFLMSRDFGEQIY 1178 (1618)
T ss_pred eee------cCCCCce-------------eHHHHHHHHHHhhhhhhhhccCCCccceeeeeccCccchHHHHHhhhhHHH
Confidence 222 5666777 777764 3445556565422 233345899
Q ss_pred HHHHHHHhhCCcchHHhHHHHHHHHHHhhcCCCC------chhHHHHHHHHHHhhcCCCCCcchhhhhhHHHHHHHHHHH
Q psy8748 1130 ELLLHYIQLTPSTALAESWPSLLLLLREGPSLSP------PSQFILMAILSQFVHRTSAPLPDRRDQKDLQDITAKLIES 1203 (2004)
Q Consensus 1130 ~FL~~Y~~sL~~~~l~eiW~~ll~flKdvlsn~~------p~~l~~l~IL~ekv~~t~f~~EdKk~rKELqD~~~KlL~a 1203 (2004)
.|+..|++...+.++. +.++++.++||+..|.+ -.++.+.+..+-|...+.| ++|++.++|++|.+.+++..
T Consensus 1179 ~~i~n~v~~~~~s~~~-F~~~ll~~~rEva~n~N~y~d~~g~~lk~v~~~aGk~s~p~f-t~~fl~~~~~~~~~f~~~~s 1256 (1618)
T COG5221 1179 ISIMNLVSNNGTSVFK-FLSTLLQVMREVAENMNVYNDSKGLLLKIVSYRAGKDSAPLF-TLNFLLGLDLGESDFALVQS 1256 (1618)
T ss_pred HHHHHHHHhhhHHHHH-HHHHHHHHHHHHHHHHhHHHHhhhHHHHHHHhhcCCCcccch-hHHHHhhhhhhhhHHHHHHH
Confidence 9999999999999988 99999999999988876 4556677888899999998 99999999999999999998
Q ss_pred HHhccccccccchhhhcccccccccccCCCCCCCcccccccccccccccccchhhHHHHHHHHHhhhhcccccCCCchhH
Q psy8748 1204 CAGIAGACLEQTTWLRRNLAVKEDELSNSSSDKDSDKCKFKHITVGTTVAQHSVQALSVLAQLLAPLLDVTYGSQEKERV 1283 (2004)
Q Consensus 1204 ~~~~~~~~leq~~w~~r~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~L~~l~~~l~~l~~~~~E~DRv 1283 (2004)
++-. .+--.++.+ ++..... .....++.++-..-+.||+
T Consensus 1257 ~~~n------s~~l~~k~l----D~~~~~~-------------------------------f~~~~v~~Iv~~~~~edKf 1295 (1618)
T COG5221 1257 VILN------SVYLLQKKL----DLKTRNG-------------------------------FKDYEVEVIVLERLTEDKF 1295 (1618)
T ss_pred HHHh------HHHHHHhcC----Chhhhcc-------------------------------chhhhhhHHHHhhhchhHH
Confidence 8852 111112221 1110000 0011111111122346999
Q ss_pred HHHHHhHhhhhh-cccccc-cccccchhhHHHHHHHHhhhcCccccchHHHHHHhcCCCcccccChhchhhHHHHHHHHH
Q psy8748 1284 NTLLTTLMYNVI-PYLKNH-SQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLM 1361 (2004)
Q Consensus 1284 ~~~ls~I~~nvi-P~lK~k-~~~n~~~~~~~~~LL~sLS~~~~~~KaWKk~V~DlFnD~~FF~~~~~~l~~W~~II~~w~ 1361 (2004)
++.+.+|+..++ |++|.+ ++..++.+.+. |+..+|+.+..+|.||+++.|+|||.+||.-+.+.+.+-.+.+....
T Consensus 1296 ~~t~~siVn~~iTp~Ik~~~~~~~l~~y~l~--LlavlS~~g~~vKsWr~~f~EiFnd~~lf~~gsDQl~kks~~~~~v~ 1373 (1618)
T COG5221 1296 QRTVLSIVNSLITPIIKLVNSSLGLKNYGLN--LLAVLSERGLEVKSWRKEFVEIFNDLDLFIYGSDQLHKKSSLMRKVV 1373 (1618)
T ss_pred HHHHHHHHHHHhhhheecccccccccchhHH--HHHHHHhcchhHHHHHHHHHHHhccCceEEeccHHHhhhchheeehh
Confidence 999999999988 999999 58899999888 99999999999999999999999999999999888644445555557
Q ss_pred hcCCCcHHHHHhhcccCCCcccccccChHHHHHHHHHHHHHHHhhhhccCCchhhccChhHHHHHHHHHhhcCcccccch
Q psy8748 1362 SQEPATFRDLMTRVSLSQSNSLSLFSNKEQEYEQRAQLLKKLAFVILCSETDQFHKHIPEITGLTEGALIESCAGIAGAC 1441 (2004)
Q Consensus 1362 ~~DK~~f~DLL~Rit~~~Sss~~iFtn~e~E~e~Ra~~LKRLAfLIlsse~D~yl~~Lp~I~ekl~e~L~~~~~~l~~~~ 1441 (2004)
-.|+.++.||+.|+... -.++|.++++|++.|++||+||+|++|++|.|+|+.++|.++|+|..++.+.+.+++..|
T Consensus 1374 ~e~~SilnDLi~~~dsg---liTff~s~ds~~~~k~~nl~rIsyl~~ssP~d~fl~~~~~LI~~I~~l~~sp~~klkk~~ 1450 (1618)
T COG5221 1374 VEDPSILNDLIVRLDSG---LITFFVSQDSDANNKTLNLKRISYLIFSSPYDYFLGFSLKLIEKIATLMNSPSSKLKKEV 1450 (1618)
T ss_pred ccChHHHHHHHHHhcCC---ceEEEecchhhhhhhhhhhhheeEEEEeCchHhhhhccHHHHHHHHHHhcCcchhhhhHH
Confidence 77888899999999852 334789999999999999999999999999999999999999999999999999999988
Q ss_pred hhhHHHHHHhhcccc
Q psy8748 1442 LEQTTWLRRNLAVKE 1456 (2004)
Q Consensus 1442 ~~~~~~~~~~l~~~~ 1456 (2004)
+ +|.|||.+|-
T Consensus 1451 f----ll~r~L~Lr~ 1461 (1618)
T COG5221 1451 F----LLSRMLILRI 1461 (1618)
T ss_pred H----HHHHHHHHHh
Confidence 6 7999999985
No 42
>KOG0276|consensus
Probab=99.95 E-value=1.9e-26 Score=277.76 Aligned_cols=280 Identities=22% Similarity=0.344 Sum_probs=248.0
Q ss_pred CCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCcc
Q psy8748 1554 CKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSSI 1633 (2004)
Q Consensus 1554 Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgSi 1633 (2004)
++..|.||+|||.-.|+.. +-+.|.|.||+.++ ....+.
T Consensus 12 rSdRVKsVd~HPtePw~la-~LynG~V~IWnyet-------------qtmVks--------------------------- 50 (794)
T KOG0276|consen 12 RSDRVKSVDFHPTEPWILA-ALYNGDVQIWNYET-------------QTMVKS--------------------------- 50 (794)
T ss_pred cCCceeeeecCCCCceEEE-eeecCeeEEEeccc-------------ceeeee---------------------------
Confidence 6678999999999999999 99999999999988 111111
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEeCC
Q psy8748 1634 NIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLD 1713 (2004)
Q Consensus 1634 di~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~D 1713 (2004)
+.-..-+|++..|-...+++++|++|
T Consensus 51 ------------------------------------------------------feV~~~PvRa~kfiaRknWiv~GsDD 76 (794)
T KOG0276|consen 51 ------------------------------------------------------FEVSEVPVRAAKFIARKNWIVTGSDD 76 (794)
T ss_pred ------------------------------------------------------eeecccchhhheeeeccceEEEecCC
Confidence 11123467788888889999999999
Q ss_pred CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC-
Q psy8748 1714 GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID- 1792 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd- 1792 (2004)
+.|+||+..+++.++.+..|.+.|++++.+|...++++++.|-.|++|+.+. ...+.+.+.||...|.+++|.+
T Consensus 77 ~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~-----~wa~~qtfeGH~HyVMqv~fnPk 151 (794)
T KOG0276|consen 77 MQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWEN-----EWACEQTFEGHEHYVMQVAFNPK 151 (794)
T ss_pred ceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccC-----ceeeeeEEcCcceEEEEEEecCC
Confidence 9999999999999999999999999999999999999999999999999986 5688899999999999999985
Q ss_pred -CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCC--CCEEEEEECCCeEEEEECCCCeEEEEEecCCCCe
Q psy8748 1793 -DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPD--GQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADV 1869 (2004)
Q Consensus 1793 -d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPd--g~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~I 1869 (2004)
.+.+++++-|++|++|.+.+..+..+. .+|...|.|+.+-+. ..++++|++|..|+|||..+..+++++.+|...|
T Consensus 152 D~ntFaS~sLDrTVKVWslgs~~~nfTl-~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nv 230 (794)
T KOG0276|consen 152 DPNTFASASLDRTVKVWSLGSPHPNFTL-EGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNV 230 (794)
T ss_pred CccceeeeeccccEEEEEcCCCCCceee-eccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccc
Confidence 467999999999999999988877554 699999999999874 4699999999999999999999999999999999
Q ss_pred EEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q psy8748 1870 NSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHV 1936 (2004)
Q Consensus 1870 tsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrI 1936 (2004)
..++|+|.-..+++|++||+++||+-.+.+...++... ...+.|++-.+.++.+++|.++|.|.+
T Consensus 231 s~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~g--leRvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 231 SFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYG--LERVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred eEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcC--CceEEEEeecCCCCeEEEeccCCcEEE
Confidence 99999999999999999999999999888777666433 367999999998889999988887654
No 43
>KOG0276|consensus
Probab=99.95 E-value=1e-26 Score=280.15 Aligned_cols=286 Identities=20% Similarity=0.322 Sum_probs=264.3
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcC
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLN 1764 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~ 1764 (2004)
.+.+..|+.+|.++.|+|...+++++-.+|.|.|||.++...++.+....-+|++..|-...+++++|+.|..|+||+.+
T Consensus 6 krk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnyn 85 (794)
T KOG0276|consen 6 KRKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYN 85 (794)
T ss_pred hhHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEecc
Confidence 45667799999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcceEEEEEecCccceeeeEEeCC-CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC-CCCEEEEE
Q psy8748 1765 NRDSTGAAKVIRELLGYEGFLSSCRFIDD-TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP-DGQYFVTG 1842 (2004)
Q Consensus 1765 t~~~~~~~k~i~sl~gh~~~Vssvafsdd-~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP-dg~~LaSG 1842 (2004)
+. ..+..+..|.+.+.+++.++. .+++++++|-.|++||.+.+-.....+.+|...|.+++|+| |.+.|+++
T Consensus 86 t~------ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~ 159 (794)
T KOG0276|consen 86 TG------EKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASA 159 (794)
T ss_pred cc------eeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeee
Confidence 64 678889999999999999865 57999999999999999998888888999999999999999 67799999
Q ss_pred ECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCC--CCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcC
Q psy8748 1843 SVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPS--GLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSS 1920 (2004)
Q Consensus 1843 S~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPd--g~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSP 1920 (2004)
+-|++|++|.+.+..+..++.+|...|+|+++-+. ..++++|+.|.+|+|||.++..++.++ .+|...|..+.|+|
T Consensus 160 sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TL--eGHt~Nvs~v~fhp 237 (794)
T KOG0276|consen 160 SLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTL--EGHTNNVSFVFFHP 237 (794)
T ss_pred eccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHh--hcccccceEEEecC
Confidence 99999999999999999999999999999999884 468999999999999999999999988 46667899999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEE
Q psy8748 1921 SGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKV 1978 (2004)
Q Consensus 1921 dG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrI 1978 (2004)
.-.++++|++||+++||+..+.+...++.-.-++|++++-.+.+..++.|.+.|.|.+
T Consensus 238 ~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 238 ELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred CCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCCCCeEEEeccCCcEEE
Confidence 9999999999999999999999999888888899999999998888888887776543
No 44
>KOG0316|consensus
Probab=99.95 E-value=1.7e-26 Score=253.60 Aligned_cols=291 Identities=23% Similarity=0.348 Sum_probs=256.1
Q ss_pred cccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEE
Q psy8748 1681 KLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTV 1760 (2004)
Q Consensus 1681 k~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrV 1760 (2004)
+....+.|.+|.++|+.+.|+-||+|.+++|.|.+|++|+...|..++++.+|...|..++.+.|+..+++|+.|..|.+
T Consensus 6 ptkr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~v 85 (307)
T KOG0316|consen 6 PTKRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQV 85 (307)
T ss_pred cchhceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEE
Confidence 34456778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCCcceEEEEEecCccceeeeEEeCCC-cEEEeecCCeEEEEECCCCce-eEEeeccccCCeEEEEECCCCCE
Q psy8748 1761 YDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQR-IHEVAQAHIGDVVSISLSPDGQY 1838 (2004)
Q Consensus 1761 WDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~~-i~~il~~h~~~ItsLafSPdg~~ 1838 (2004)
||++++ +..+.+.+|.+.|..+.|..+. .+++|+.|..+++||-++... ..+++......|.++... +..
T Consensus 86 wDV~TG------kv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~--~he 157 (307)
T KOG0316|consen 86 WDVNTG------KVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVA--EHE 157 (307)
T ss_pred EEcccC------eeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEec--ccE
Confidence 999865 7889999999999999999654 588899999999999986542 224566777889999886 678
Q ss_pred EEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEE
Q psy8748 1839 FVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAV 1918 (2004)
Q Consensus 1839 LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLaf 1918 (2004)
+++|+.||+++.||++.|+....+. ..+|+|++|+++++..++++.|+++++.|-.+|+.+..+..+.....-..+++
T Consensus 158 IvaGS~DGtvRtydiR~G~l~sDy~--g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l 235 (307)
T KOG0316|consen 158 IVAGSVDGTVRTYDIRKGTLSSDYF--GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCL 235 (307)
T ss_pred EEeeccCCcEEEEEeecceeehhhc--CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeee
Confidence 9999999999999999998766554 46899999999999999999999999999999999988876555555567888
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCC-eEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1919 SSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENR-VTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1919 SPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~-VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
.....++++|++||.|++||+.....+..+..|... |++++++|....+++++. +.+..|.-.
T Consensus 236 ~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~-~~~~~~~~~ 299 (307)
T KOG0316|consen 236 NQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATG-HGDLFWYQE 299 (307)
T ss_pred cccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecC-Cceeceeeh
Confidence 888899999999999999999999999999988888 899999998888888774 456666543
No 45
>KOG0265|consensus
Probab=99.95 E-value=2.2e-26 Score=260.45 Aligned_cols=290 Identities=21% Similarity=0.380 Sum_probs=245.2
Q ss_pred CCCCCCCCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccc
Q psy8748 1545 DIPTNAPEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRD 1624 (2004)
Q Consensus 1545 ~~pt~a~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ 1624 (2004)
..|.....+|++.|..+.|+|+|.++|| |+.|+.|.+|++.. + + .
T Consensus 37 ~ap~m~l~gh~geI~~~~F~P~gs~~aS-gG~Dr~I~LWnv~g--------------------d-------c--e----- 81 (338)
T KOG0265|consen 37 QAPIMLLPGHKGEIYTIKFHPDGSCFAS-GGSDRAIVLWNVYG--------------------D-------C--E----- 81 (338)
T ss_pred cchhhhcCCCcceEEEEEECCCCCeEee-cCCcceEEEEeccc--------------------c-------c--c-----
Confidence 3455566779999999999999999999 99999999999866 0 0 0
Q ss_pred cccCCCCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCC
Q psy8748 1625 LMMKPTSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDS 1704 (2004)
Q Consensus 1625 ll~spdgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG 1704 (2004)
-..+++||.++|..+.|.+|+
T Consensus 82 -----------------------------------------------------------N~~~lkgHsgAVM~l~~~~d~ 102 (338)
T KOG0265|consen 82 -----------------------------------------------------------NFWVLKGHSGAVMELHGMRDG 102 (338)
T ss_pred -----------------------------------------------------------ceeeeccccceeEeeeeccCC
Confidence 022456899999999999999
Q ss_pred CEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCC-EEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCcc
Q psy8748 1705 RHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGN-FVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEG 1783 (2004)
Q Consensus 1705 ~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~-~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~ 1783 (2004)
..++++|.|++|+.||.++|+..+.+++|...|.++.-+.-|. .+.+|+.||++++||++..+.... .....
T Consensus 103 s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t-------~~~ky 175 (338)
T KOG0265|consen 103 SHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKT-------FENKY 175 (338)
T ss_pred CEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhc-------cccce
Confidence 9999999999999999999999999999999999998655554 667888999999999986542221 12244
Q ss_pred ceeeeEEeC-CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCC----CeE
Q psy8748 1784 FLSSCRFID-DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFRE----KKC 1858 (2004)
Q Consensus 1784 ~Vssvafsd-d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs----~k~ 1858 (2004)
.++++.|.+ ...+++|+-|+.|++||++.+... .+..+|.+.|+.+..+++|.++.+-+.|.++++||++. ..+
T Consensus 176 qltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~-~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~ 254 (338)
T KOG0265|consen 176 QLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGL-YTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRC 254 (338)
T ss_pred eEEEEEecccccceeeccccCceeeeccccCcce-EEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCce
Confidence 577888885 457999999999999999988877 45689999999999999999999999999999999984 345
Q ss_pred EEEEecCCC----CeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeE
Q psy8748 1859 VQTFFGHEA----DVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNV 1934 (2004)
Q Consensus 1859 I~tl~~h~s----~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsI 1934 (2004)
+..+.+|.. ....++|+|+++.+.+|+.|..+++||......+..+ ++|.+.|.+++|+|...+|.+++.|.+|
T Consensus 255 v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lykl--pGh~gsvn~~~Fhp~e~iils~~sdk~i 332 (338)
T KOG0265|consen 255 VKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKL--PGHYGSVNEVDFHPTEPIILSCSSDKTI 332 (338)
T ss_pred EEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEc--CCcceeEEEeeecCCCcEEEEeccCcee
Confidence 777766543 3457899999999999999999999999877777666 7888999999999999999999999999
Q ss_pred EEEE
Q psy8748 1935 HVWD 1938 (2004)
Q Consensus 1935 rIWD 1938 (2004)
++=.
T Consensus 333 ~lge 336 (338)
T KOG0265|consen 333 YLGE 336 (338)
T ss_pred Eeec
Confidence 8743
No 46
>KOG0645|consensus
Probab=99.95 E-value=1.2e-25 Score=251.59 Aligned_cols=289 Identities=21% Similarity=0.305 Sum_probs=238.4
Q ss_pred CCCCCCCeEEEEEccC-CCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCC
Q psy8748 1551 PEPCKEQRNAVSFHAC-STLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKP 1629 (2004)
Q Consensus 1551 ~e~Hk~~VtsVsFSPd-Gk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~sp 1629 (2004)
..+|++.|..++|+|- |..||| |+.|..||||+... +.. |
T Consensus 10 ~~gh~~r~W~~awhp~~g~ilAs-cg~Dk~vriw~~~~-------------~~s---~---------------------- 50 (312)
T KOG0645|consen 10 LSGHKDRVWSVAWHPGKGVILAS-CGTDKAVRIWSTSS-------------GDS---W---------------------- 50 (312)
T ss_pred ecCCCCcEEEEEeccCCceEEEe-ecCCceEEEEecCC-------------CCc---E----------------------
Confidence 3468989999999999 999999 99999999999874 000 0
Q ss_pred CCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccc-cccccceeEEEEeCCCCEEE
Q psy8748 1630 TSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSL-KGHINKVNSVHYSGDSRHCV 1708 (2004)
Q Consensus 1630 dgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL-~GHt~~VtsLaFSPDG~~LA 1708 (2004)
.++..| .+|+..|++++|+|.|++||
T Consensus 51 -----------------------------------------------------~ck~vld~~hkrsVRsvAwsp~g~~La 77 (312)
T KOG0645|consen 51 -----------------------------------------------------TCKTVLDDGHKRSVRSVAWSPHGRYLA 77 (312)
T ss_pred -----------------------------------------------------EEEEeccccchheeeeeeecCCCcEEE
Confidence 011111 25999999999999999999
Q ss_pred EEeCCCeEEEEECCCC--ceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCcccee
Q psy8748 1709 SGSLDGKLIIWDTWTG--NKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLS 1786 (2004)
Q Consensus 1709 SGS~DGtIrVWDl~Tg--k~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vs 1786 (2004)
+|+.|.++.||.-..+ +++..+.+|...|.|++|+++|++|++++.|..|-+|.++..+ .+.+...+.+|...|.
T Consensus 78 ~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~dedd---Efec~aVL~~HtqDVK 154 (312)
T KOG0645|consen 78 SASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDD---EFECIAVLQEHTQDVK 154 (312)
T ss_pred EeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCC---cEEEEeeecccccccc
Confidence 9999999999976544 6788899999999999999999999999999999999998543 7888999999999999
Q ss_pred eeEEeCC-CcEEEeecCCeEEEEECCCCc--eeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEe
Q psy8748 1787 SCRFIDD-TTLLTGSGDMKIVTWNLETGQ--RIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFF 1863 (2004)
Q Consensus 1787 svafsdd-~~LlSgS~DGtI~IWDl~tg~--~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~ 1863 (2004)
.+.|++. ..|++++.|.+|++|+-..+. .....+.+|...|.+++|++.|..+++++.|++++||.....- -.
T Consensus 155 ~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~~~~----~~ 230 (312)
T KOG0645|consen 155 HVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSRLVSCSDDGTVSIWRLYTDL----SG 230 (312)
T ss_pred EEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCceEEEecCCcceEeeeeccCc----ch
Confidence 9999975 568999999999999876322 2234568899999999999999999999999999999865321 12
Q ss_pred cCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEE-----cCCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEE
Q psy8748 1864 GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATY-----LPPNKNSGFTSCAVSSS-GRYIFCGSDDNNVHVW 1937 (2004)
Q Consensus 1864 ~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~-----~~~~~~s~ItsLafSPd-G~~LaSGSsDGsIrIW 1937 (2004)
.|..++..+.|. + ..|++++.|+.|++|.-...-.-..+ ....|...|++++|.|. .+.|++|+.||.|++|
T Consensus 231 ~~sr~~Y~v~W~-~-~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W 308 (312)
T KOG0645|consen 231 MHSRALYDVPWD-N-GVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFW 308 (312)
T ss_pred hcccceEeeeec-c-cceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEE
Confidence 467889999998 4 47999999999999986542111111 22456678999999994 7899999999999999
Q ss_pred ECC
Q psy8748 1938 DLL 1940 (2004)
Q Consensus 1938 DL~ 1940 (2004)
.+.
T Consensus 309 ~l~ 311 (312)
T KOG0645|consen 309 ELE 311 (312)
T ss_pred Eec
Confidence 864
No 47
>KOG0281|consensus
Probab=99.95 E-value=8.4e-28 Score=273.67 Aligned_cols=246 Identities=23% Similarity=0.414 Sum_probs=213.4
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcC
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLN 1764 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~ 1764 (2004)
.+.|.||++.|.|+.|. .+.+++|+.|.+|+|||+.+|+.+.++-+|...|..+.|+ +.++++++.|..|.+||+.
T Consensus 230 ~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~--ng~mvtcSkDrsiaVWdm~ 305 (499)
T KOG0281|consen 230 LKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFS--NGYMVTCSKDRSIAVWDMA 305 (499)
T ss_pred HHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEe--CCEEEEecCCceeEEEecc
Confidence 45678999999999986 5699999999999999999999999999999999999998 7899999999999999998
Q ss_pred CCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEEC
Q psy8748 1765 NRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSV 1844 (2004)
Q Consensus 1765 t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~ 1844 (2004)
... .....+.+.||...|..+.|.+. ++++++.|.+|++|++.+++.+ ..+.+|...|-|+.+. |+++++|+.
T Consensus 306 sps---~it~rrVLvGHrAaVNvVdfd~k-yIVsASgDRTikvW~~st~efv-Rtl~gHkRGIAClQYr--~rlvVSGSS 378 (499)
T KOG0281|consen 306 SPT---DITLRRVLVGHRAAVNVVDFDDK-YIVSASGDRTIKVWSTSTCEFV-RTLNGHKRGIACLQYR--DRLVVSGSS 378 (499)
T ss_pred Cch---HHHHHHHHhhhhhheeeeccccc-eEEEecCCceEEEEeccceeee-hhhhcccccceehhcc--CeEEEecCC
Confidence 653 44555678899999999988655 9999999999999999999988 5568999999999885 899999999
Q ss_pred CCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEE-------EcCCCCCCCeEEEE
Q psy8748 1845 DKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIAT-------YLPPNKNSGFTSCA 1917 (2004)
Q Consensus 1845 DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t-------~~~~~~~s~ItsLa 1917 (2004)
|.+|++||+..|.+++.+.+|+.-|.|+.|. .+.+++|+.||+|++||+..+..... .....|.+.|..+.
T Consensus 379 DntIRlwdi~~G~cLRvLeGHEeLvRciRFd--~krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQ 456 (499)
T KOG0281|consen 379 DNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQ 456 (499)
T ss_pred CceEEEEeccccHHHHHHhchHHhhhheeec--CceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEe
Confidence 9999999999999999999999999999995 56899999999999999987654311 12234556788888
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCCeee
Q psy8748 1918 VSSSGRYIFCGSDDNNVHVWDLLKTTHN 1945 (2004)
Q Consensus 1918 fSPdG~~LaSGSsDGsIrIWDL~tge~l 1945 (2004)
|. ...+++++.|.+|.|||..++.+-
T Consensus 457 FD--~fqIvsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 457 FD--EFQIISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred ec--ceEEEeccCCCeEEEEEcCCCCcc
Confidence 84 578999999999999999776554
No 48
>KOG0293|consensus
Probab=99.95 E-value=6.7e-27 Score=271.73 Aligned_cols=290 Identities=23% Similarity=0.327 Sum_probs=242.2
Q ss_pred CCCCCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCcccccccc
Q psy8748 1548 TNAPEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMM 1627 (2004)
Q Consensus 1548 t~a~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~ 1627 (2004)
+.....|+..|+-+.||++|+|||| |+.|.+..||++.. +.
T Consensus 217 ~qil~~htdEVWfl~FS~nGkyLAs-aSkD~Taiiw~v~~--------------------d~------------------ 257 (519)
T KOG0293|consen 217 WQILQDHTDEVWFLQFSHNGKYLAS-ASKDSTAIIWIVVY--------------------DV------------------ 257 (519)
T ss_pred hhhHhhCCCcEEEEEEcCCCeeEee-ccCCceEEEEEEec--------------------Cc------------------
Confidence 3445569999999999999999999 99999999999866 11
Q ss_pred CCCCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEE
Q psy8748 1628 KPTSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHC 1707 (2004)
Q Consensus 1628 spdgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~L 1707 (2004)
.++..+++.||..+|..+.||||.++|
T Consensus 258 -----------------------------------------------------~~kl~~tlvgh~~~V~yi~wSPDdryL 284 (519)
T KOG0293|consen 258 -----------------------------------------------------HFKLKKTLVGHSQPVSYIMWSPDDRYL 284 (519)
T ss_pred -----------------------------------------------------ceeeeeeeecccCceEEEEECCCCCeE
Confidence 012366788999999999999999999
Q ss_pred EEEeCCCeEEEEECCCCceEEEeeC-CCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecC-ccce
Q psy8748 1708 VSGSLDGKLIIWDTWTGNKTQVIPL-RSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGY-EGFL 1785 (2004)
Q Consensus 1708 ASGS~DGtIrVWDl~Tgk~l~ti~~-Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh-~~~V 1785 (2004)
++|+.|..+++||+.+|...+.+.. +...+.+++|.|||..+++|+.|+.|..||++... .....+. ...+
T Consensus 285 laCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~-------~~~W~gvr~~~v 357 (519)
T KOG0293|consen 285 LACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNI-------LGNWEGVRDPKV 357 (519)
T ss_pred EecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcch-------hhccccccccee
Confidence 9999999999999999999887753 56789999999999999999999999999997642 1111121 2456
Q ss_pred eeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEec
Q psy8748 1786 SSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFG 1864 (2004)
Q Consensus 1786 ssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~ 1864 (2004)
.+++.. ++..+++.+.|..|++|+.++......+ ....+|++++.+.+++++++.-.+..|++||+...+.++.+.+
T Consensus 358 ~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~li--se~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~G 435 (519)
T KOG0293|consen 358 HDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLI--SEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFG 435 (519)
T ss_pred EEEEEcCCCcEEEEEecccceeeechhhhhhhccc--cccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhc
Confidence 777776 5566888899999999998876544222 4456899999999999999999999999999999888889988
Q ss_pred CCCC--eEEEEEeC-CCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECC
Q psy8748 1865 HEAD--VNSVCFHP-SGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSS-SGRYIFCGSDDNNVHVWDLL 1940 (2004)
Q Consensus 1865 h~s~--ItsIafSP-dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSP-dG~~LaSGSsDGsIrIWDL~ 1940 (2004)
|... +..-||-. +..++++|++|++|+||+..+++.+..+ .+|...|.|++|+| +-.++|+|++||+|+||...
T Consensus 436 hkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~L--sGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 436 HKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVL--SGHSKTVNCVSWNPADPEMFASASDDGTIRIWGPS 513 (519)
T ss_pred ccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEee--cCCcceeeEEecCCCCHHHhhccCCCCeEEEecCC
Confidence 8754 44445544 5579999999999999999999999988 57778999999999 55788999999999999864
No 49
>KOG0296|consensus
Probab=99.95 E-value=5.6e-26 Score=262.33 Aligned_cols=308 Identities=18% Similarity=0.268 Sum_probs=262.1
Q ss_pred ccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEc
Q psy8748 1684 PKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDL 1763 (2004)
Q Consensus 1684 pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl 1763 (2004)
....+..|++.|.+++.+|+.++++|||.|..-.+|++.+|.....+.+|+..|+++.|+.+|.+|++|+.+|.|+||..
T Consensus 56 S~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~ 135 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKV 135 (399)
T ss_pred ceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEc
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCcceEEEEEecCccceeeeEEeCCC-cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEE
Q psy8748 1764 NNRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTG 1842 (2004)
Q Consensus 1764 ~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSG 1842 (2004)
.++. ....+...-..+..+.|++.. .+++|+.||.+..|.+.++... +++.+|..++++=.|.|+|+.+++|
T Consensus 136 stg~------~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~-kv~~Gh~~~ct~G~f~pdGKr~~tg 208 (399)
T KOG0296|consen 136 STGG------EQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALC-KVMSGHNSPCTCGEFIPDGKRILTG 208 (399)
T ss_pred ccCc------eEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCccee-eEecCCCCCcccccccCCCceEEEE
Confidence 8753 333444455667778888654 5888999999999999987444 6778999999999999999999999
Q ss_pred ECCCeEEEEECCCCeEEEEEecC-CCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcC------CCCCC---C
Q psy8748 1843 SVDKSCKLWDFREKKCVQTFFGH-EADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLP------PNKNS---G 1912 (2004)
Q Consensus 1843 S~DGsIrIWDlrs~k~I~tl~~h-~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~------~~~~s---~ 1912 (2004)
..||+|++|+..+++++..+... .....++.++..+..++.|+.++.+++-+..+|+.+..... ..+.. .
T Consensus 209 y~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~es 288 (399)
T KOG0296|consen 209 YDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDES 288 (399)
T ss_pred ecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhh
Confidence 99999999999999998887633 34678899999999999999999999999988888776642 11222 3
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEEe
Q psy8748 1913 FTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKV 1992 (2004)
Q Consensus 1913 ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik~ 1992 (2004)
|.++.++..-.+.|+|+-||+|.|||+...+..+.+. |...|+.+.|-+ ..+|++++.||.|+.||..+|++ .-.
T Consensus 289 ve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~-he~~V~~l~w~~-t~~l~t~c~~g~v~~wDaRtG~l---~~~ 363 (399)
T KOG0296|consen 289 VESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICE-HEDGVTKLKWLN-TDYLLTACANGKVRQWDARTGQL---KFT 363 (399)
T ss_pred hhhcccccccchhhcccccceEEEEecccchhheecc-CCCceEEEEEcC-cchheeeccCceEEeeeccccce---EEE
Confidence 4445555567789999999999999998887766665 888999999998 78999999999999999999954 556
Q ss_pred ecCCCCccccc
Q psy8748 1993 YNLEKKTIFCV 2003 (2004)
Q Consensus 1993 ~~~h~~~VtsV 2003 (2004)
+.+|..+|.++
T Consensus 364 y~GH~~~Il~f 374 (399)
T KOG0296|consen 364 YTGHQMGILDF 374 (399)
T ss_pred EecCchheeEE
Confidence 67888777653
No 50
>KOG0292|consensus
Probab=99.94 E-value=8e-26 Score=279.38 Aligned_cols=290 Identities=19% Similarity=0.360 Sum_probs=257.7
Q ss_pred cccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCC
Q psy8748 1687 SLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNR 1766 (2004)
Q Consensus 1687 sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~ 1766 (2004)
.+...+.+|..++|+|...+++++-..|.|++||.+-+.++..|..|+++|++++|+|++.++++||.|-.|+||++...
T Consensus 4 kfEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~r 83 (1202)
T KOG0292|consen 4 KFESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTR 83 (1202)
T ss_pred hhhcccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccc
Confidence 34556788999999999999999999999999999999999999999999999999999999999999999999999754
Q ss_pred CCCCcceEEEEEecCccceeeeEEeCC-CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECC
Q psy8748 1767 DSTGAAKVIRELLGYEGFLSSCRFIDD-TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVD 1845 (2004)
Q Consensus 1767 ~~~~~~k~i~sl~gh~~~Vssvafsdd-~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~D 1845 (2004)
++..++.||-+.|..+.|+.. ..++++++|.+|+||+..+++++ .+..+|...|.|..|+|....+++++-|
T Consensus 84 ------rclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~i-avltGHnHYVMcAqFhptEDlIVSaSLD 156 (1202)
T KOG0292|consen 84 ------RCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCI-AVLTGHNHYVMCAQFHPTEDLIVSASLD 156 (1202)
T ss_pred ------eehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceE-EEEecCceEEEeeccCCccceEEEeccc
Confidence 677889999999999999854 56999999999999999999998 5668999999999999999999999999
Q ss_pred CeEEEEECCC--------C-------------------e--EEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEcc
Q psy8748 1846 KSCKLWDFRE--------K-------------------K--CVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIR 1896 (2004)
Q Consensus 1846 GsIrIWDlrs--------~-------------------k--~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLr 1896 (2004)
.+|++||+.. + . ....+.+|...|+-++|+|.-..+++|+.|..|++|.+.
T Consensus 157 QTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmn 236 (1202)
T KOG0292|consen 157 QTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMN 236 (1202)
T ss_pred ceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEec
Confidence 9999999752 1 0 123456899999999999999999999999999999987
Q ss_pred CCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeE
Q psy8748 1897 ADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFV 1976 (2004)
Q Consensus 1897 tgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtI 1976 (2004)
..+.-..-...+|...|.++-|+|..++|++.++|++|+|||+.+.+.+.+++...++.+.++-+|..+++++|- |+-+
T Consensus 237 etKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAgH-DsGm 315 (1202)
T KOG0292|consen 237 ETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAGH-DSGM 315 (1202)
T ss_pred cccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeeeec-CCce
Confidence 665544444567888999999999999999999999999999999999999988889999999999998766655 6667
Q ss_pred EEEECCCC
Q psy8748 1977 KVWQESNT 1984 (2004)
Q Consensus 1977 rIWdlstg 1984 (2004)
.+|.++..
T Consensus 316 ~VFkleRE 323 (1202)
T KOG0292|consen 316 IVFKLERE 323 (1202)
T ss_pred EEEEEccc
Confidence 78888744
No 51
>KOG0292|consensus
Probab=99.94 E-value=2.1e-25 Score=275.74 Aligned_cols=286 Identities=23% Similarity=0.344 Sum_probs=250.0
Q ss_pred CCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCcch
Q psy8748 1555 KEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSSIN 1634 (2004)
Q Consensus 1555 k~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgSid 1634 (2004)
+..|-.++|||.--|+.+ +-..|.|.+||..- +.
T Consensus 9 SsRvKglsFHP~rPwILt-slHsG~IQlWDYRM-------------~t-------------------------------- 42 (1202)
T KOG0292|consen 9 SSRVKGLSFHPKRPWILT-SLHSGVIQLWDYRM-------------GT-------------------------------- 42 (1202)
T ss_pred cccccceecCCCCCEEEE-eecCceeeeehhhh-------------hh--------------------------------
Confidence 346889999999999999 99999999999865 11
Q ss_pred hhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEeCCC
Q psy8748 1635 IYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDG 1714 (2004)
Q Consensus 1635 i~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DG 1714 (2004)
.+..+.+|.++|+.++|+|++.++++||+|.
T Consensus 43 -------------------------------------------------li~rFdeHdGpVRgv~FH~~qplFVSGGDDy 73 (1202)
T KOG0292|consen 43 -------------------------------------------------LIDRFDEHDGPVRGVDFHPTQPLFVSGGDDY 73 (1202)
T ss_pred -------------------------------------------------HHhhhhccCCccceeeecCCCCeEEecCCcc
Confidence 1334667999999999999999999999999
Q ss_pred eEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC-C
Q psy8748 1715 KLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID-D 1793 (2004)
Q Consensus 1715 tIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd-d 1793 (2004)
.|+||+.++.+++.++.+|-+.|+.+.|++.-.++++++.|.+|+||++.++ +.+..+.||...|.|..|++ .
T Consensus 74 kIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr------~~iavltGHnHYVMcAqFhptE 147 (1202)
T KOG0292|consen 74 KIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSR------KCIAVLTGHNHYVMCAQFHPTE 147 (1202)
T ss_pred EEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCC------ceEEEEecCceEEEeeccCCcc
Confidence 9999999999999999999999999999999999999999999999999864 67889999999999999998 6
Q ss_pred CcEEEeecCCeEEEEECCC--------C--------------------ceeEEeeccccCCeEEEEECCCCCEEEEEECC
Q psy8748 1794 TTLLTGSGDMKIVTWNLET--------G--------------------QRIHEVAQAHIGDVVSISLSPDGQYFVTGSVD 1845 (2004)
Q Consensus 1794 ~~LlSgS~DGtI~IWDl~t--------g--------------------~~i~~il~~h~~~ItsLafSPdg~~LaSGS~D 1845 (2004)
+.+++++-|.+|++||+.. + ..+..+..+|...|.-++|+|.-..|++|++|
T Consensus 148 DlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DD 227 (1202)
T KOG0292|consen 148 DLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADD 227 (1202)
T ss_pred ceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCc
Confidence 6799999999999999852 1 12345578999999999999999999999999
Q ss_pred CeEEEEECCCCeE--EEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCC
Q psy8748 1846 KSCKLWDFREKKC--VQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGR 1923 (2004)
Q Consensus 1846 GsIrIWDlrs~k~--I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~ 1923 (2004)
..|++|.+...+. +.+..+|...|.++-|+|..+.+++.|+|+.|+|||+...+.+.++.. .....+.++.+|..+
T Consensus 228 RqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrr--endRFW~laahP~lN 305 (1202)
T KOG0292|consen 228 RQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRR--ENDRFWILAAHPELN 305 (1202)
T ss_pred ceeeEEEeccccceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeec--cCCeEEEEEecCCcc
Confidence 9999999876542 566789999999999999999999999999999999999988888853 346789999999999
Q ss_pred EEEEEeCCCeEEEEECCCCee
Q psy8748 1924 YIFCGSDDNNVHVWDLLKTTH 1944 (2004)
Q Consensus 1924 ~LaSGSsDGsIrIWDL~tge~ 1944 (2004)
++++|. |+-+.+|.+....+
T Consensus 306 LfAAgH-DsGm~VFkleRErp 325 (1202)
T KOG0292|consen 306 LFAAGH-DSGMIVFKLERERP 325 (1202)
T ss_pred eeeeec-CCceEEEEEcccCc
Confidence 998885 55577777754443
No 52
>KOG0281|consensus
Probab=99.94 E-value=6.2e-27 Score=266.64 Aligned_cols=275 Identities=22% Similarity=0.392 Sum_probs=241.8
Q ss_pred cccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCC
Q psy8748 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTG 1770 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~ 1770 (2004)
...+|.|+.+. ...+++|..|++|+|||..+..+...+.+|++.|.|+.|. .+.+++|+.|.+|++||++++
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd--~rviisGSSDsTvrvWDv~tg---- 267 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYD--ERVIVSGSSDSTVRVWDVNTG---- 267 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeecc--ceEEEecCCCceEEEEeccCC----
Confidence 56789999975 5579999999999999999999999999999999999996 669999999999999999876
Q ss_pred cceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCce--eEEeeccccCCeEEEEECCCCCEEEEEECCCeE
Q psy8748 1771 AAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQR--IHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSC 1848 (2004)
Q Consensus 1771 ~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~--i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsI 1848 (2004)
+.+.++.+|...|..+.|+ ++++++++.|..+.+||+..... ....+.+|...|..+.|+ .+++++++.|.+|
T Consensus 268 --e~l~tlihHceaVLhlrf~-ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTi 342 (499)
T KOG0281|consen 268 --EPLNTLIHHCEAVLHLRFS-NGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTI 342 (499)
T ss_pred --chhhHHhhhcceeEEEEEe-CCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceE
Confidence 5667788899999998886 45899999999999999987653 234467999999999996 6699999999999
Q ss_pred EEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEE
Q psy8748 1849 KLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCG 1928 (2004)
Q Consensus 1849 rIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSG 1928 (2004)
++|++.+++.++++.+|...|.|+.+ .|+++++|+.|.+|++||+..|.++..+ .+|..-|.|+.|. .+.+++|
T Consensus 343 kvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvL--eGHEeLvRciRFd--~krIVSG 416 (499)
T KOG0281|consen 343 KVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVL--EGHEELVRCIRFD--NKRIVSG 416 (499)
T ss_pred EEEeccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHH--hchHHhhhheeec--Cceeeec
Confidence 99999999999999999999999887 5789999999999999999999998877 5676789999995 6789999
Q ss_pred eCCCeEEEEECCCCe---------eeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeE
Q psy8748 1929 SDDNNVHVWDLLKTT---------HNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIV 1986 (2004)
Q Consensus 1929 SsDGsIrIWDL~tge---------~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l 1986 (2004)
..||+|++||+..+. ++.++..|.++|..+.| |...+++++.|.+|-|||+.++-.
T Consensus 417 aYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl~~~~ 481 (499)
T KOG0281|consen 417 AYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFLNGPP 481 (499)
T ss_pred cccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcCCCCc
Confidence 999999999997654 33445679999999999 667899999999999999988754
No 53
>KOG0282|consensus
Probab=99.94 E-value=1.5e-26 Score=274.50 Aligned_cols=285 Identities=20% Similarity=0.336 Sum_probs=245.9
Q ss_pred CCCCCCCeEEEEEcc-CCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCC
Q psy8748 1551 PEPCKEQRNAVSFHA-CSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKP 1629 (2004)
Q Consensus 1551 ~e~Hk~~VtsVsFSP-dGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~sp 1629 (2004)
-.+|..+|+++.|.| .|.+|++ |+.|+.|+||++-. ++
T Consensus 210 ~~gH~kgvsai~~fp~~~hLlLS-~gmD~~vklW~vy~--------------------~~-------------------- 248 (503)
T KOG0282|consen 210 LSGHTKGVSAIQWFPKKGHLLLS-GGMDGLVKLWNVYD--------------------DR-------------------- 248 (503)
T ss_pred ccCCccccchhhhccceeeEEEe-cCCCceEEEEEEec--------------------Cc--------------------
Confidence 345889999999999 8999999 99999999999866 11
Q ss_pred CCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEE
Q psy8748 1630 TSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVS 1709 (2004)
Q Consensus 1630 dgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LAS 1709 (2004)
.+++++.||..+|.+++|+.+|..+++
T Consensus 249 -----------------------------------------------------~~lrtf~gH~k~Vrd~~~s~~g~~fLS 275 (503)
T KOG0282|consen 249 -----------------------------------------------------RCLRTFKGHRKPVRDASFNNCGTSFLS 275 (503)
T ss_pred -----------------------------------------------------ceehhhhcchhhhhhhhccccCCeeee
Confidence 135677889999999999999999999
Q ss_pred EeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCC-CEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeee
Q psy8748 1710 GSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSG-NFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSC 1788 (2004)
Q Consensus 1710 GS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg-~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssv 1788 (2004)
+|.|+.|++||+++|++...+.. ...++|+.|+|++ +.+++|+.|+.|+.||++++ +.++.+..|-+.+..+
T Consensus 276 ~sfD~~lKlwDtETG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~------kvvqeYd~hLg~i~~i 348 (503)
T KOG0282|consen 276 ASFDRFLKLWDTETGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSG------KVVQEYDRHLGAILDI 348 (503)
T ss_pred eecceeeeeeccccceEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEEEeccch------HHHHHHHhhhhheeee
Confidence 99999999999999999998874 4568999999998 89999999999999999865 4566777788899999
Q ss_pred EEeCC-CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC---eEEEEEec
Q psy8748 1789 RFIDD-TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREK---KCVQTFFG 1864 (2004)
Q Consensus 1789 afsdd-~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~---k~I~tl~~ 1864 (2004)
.|.++ .++++.++|+.+++|+.+.+-.+..+...+.....++..+|++++++.-+.|+.|.++.+... ...+.+.+
T Consensus 349 ~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feG 428 (503)
T KOG0282|consen 349 TFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEG 428 (503)
T ss_pred EEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcc
Confidence 99865 569999999999999999988877666666677889999999999999999999999986532 22345566
Q ss_pred CC--CCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEE
Q psy8748 1865 HE--ADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSS-GRYIFCGSDDNNVHVWD 1938 (2004)
Q Consensus 1865 h~--s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPd-G~~LaSGSsDGsIrIWD 1938 (2004)
|. +.-..+.|||||.+|++|+.||.+.+||.++-+.+.++. .|...+..+.|+|. ...+|+++.||.|++||
T Consensus 429 h~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lk--ah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 429 HSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLK--AHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred eeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhccc--cCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 65 345678999999999999999999999999999888874 55688999999994 56899999999999996
No 54
>KOG0275|consensus
Probab=99.94 E-value=3.1e-26 Score=258.53 Aligned_cols=283 Identities=23% Similarity=0.429 Sum_probs=250.0
Q ss_pred ccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe--------eCCCCceEEEEEecCCCEEEEeecCCeEEEE
Q psy8748 1690 GHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVI--------PLRSAWVMSVAFAQSGNFVACGGMDNMCTVY 1761 (2004)
Q Consensus 1690 GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti--------~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVW 1761 (2004)
|...-+.|..|||||+||++|+.||.|.|||..+|+....+ --++.+|.|++|+.|...+++|+.||.|++|
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW 290 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW 290 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence 34566889999999999999999999999999999776543 3478899999999999999999999999999
Q ss_pred EcCCCCCCCcceEEEEEe-cCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEE
Q psy8748 1762 DLNNRDSTGAAKVIRELL-GYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYF 1839 (2004)
Q Consensus 1762 Dl~t~~~~~~~k~i~sl~-gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~L 1839 (2004)
.+.++. +++.+. .|...++++.|+ ++..+++++.|.++++.-+++|+++.. +.+|...|+...|.++|..+
T Consensus 291 ri~tG~------ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKE-frGHsSyvn~a~ft~dG~~i 363 (508)
T KOG0275|consen 291 RIETGQ------CLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKE-FRGHSSYVNEATFTDDGHHI 363 (508)
T ss_pred EEecch------HHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHH-hcCccccccceEEcCCCCeE
Confidence 998764 334443 788999999999 556799999999999999999999844 57999999999999999999
Q ss_pred EEEECCCeEEEEECCCCeEEEEEec--CCCCeEEEEEeC-CCCEEEEEECCCeEEEEEccCCceeEEEcCC-CCCCCeEE
Q psy8748 1840 VTGSVDKSCKLWDFREKKCVQTFFG--HEADVNSVCFHP-SGLAFATGSEDKTARLFDIRADQQIATYLPP-NKNSGFTS 1915 (2004)
Q Consensus 1840 aSGS~DGsIrIWDlrs~k~I~tl~~--h~s~ItsIafSP-dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~-~~~s~Its 1915 (2004)
++++.||+|++|+.++.+++.+++. ...+|+++...| +...++++...++|+|.++. |+.+..+... ...+...+
T Consensus 364 isaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~ 442 (508)
T KOG0275|consen 364 ISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFIN 442 (508)
T ss_pred EEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEE
Confidence 9999999999999999999988864 345788888877 55689999999999999986 7777777433 33466788
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Q psy8748 1916 CAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQ 1980 (2004)
Q Consensus 1916 LafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWd 1980 (2004)
++.+|.|.++++.+.|+.++.|.+.+|+...++..|...|.+++-+|..+.+++-+.||.+++|.
T Consensus 443 ~~lSpkGewiYcigED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 443 AILSPKGEWIYCIGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred EEecCCCcEEEEEccCcEEEEEEeecCceeeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999995
No 55
>KOG0283|consensus
Probab=99.94 E-value=2.1e-25 Score=279.61 Aligned_cols=211 Identities=23% Similarity=0.404 Sum_probs=177.6
Q ss_pred CcccccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEec-CCCEEEEeecCC
Q psy8748 1678 PKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQ-SGNFVACGGMDN 1756 (2004)
Q Consensus 1678 ~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSP-dg~~LaSGS~DG 1756 (2004)
..+.-.|.+.+.||++.|.++.||.+ ++|++++.|.+|++|++....++..|. |...|+|++|+| |.++|++|+-||
T Consensus 355 f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~ 432 (712)
T KOG0283|consen 355 FVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDG 432 (712)
T ss_pred ccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeeccccc
Confidence 34466789999999999999999965 589999999999999999999999887 999999999999 788999999999
Q ss_pred eEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCC
Q psy8748 1757 MCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDG 1836 (2004)
Q Consensus 1757 tIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg 1836 (2004)
.|++|++.. ..|..|. ....-|++++|.|||
T Consensus 433 KvRiWsI~d-------------------------------------~~Vv~W~------------Dl~~lITAvcy~PdG 463 (712)
T KOG0283|consen 433 KVRLWSISD-------------------------------------KKVVDWN------------DLRDLITAVCYSPDG 463 (712)
T ss_pred ceEEeecCc-------------------------------------CeeEeeh------------hhhhhheeEEeccCC
Confidence 999999853 2334443 112558999999999
Q ss_pred CEEEEEECCCeEEEEECCCCeEEEEEec--------CCCCeEEEEEeCC-CCEEEEEECCCeEEEEEccCCceeEEEcCC
Q psy8748 1837 QYFVTGSVDKSCKLWDFREKKCVQTFFG--------HEADVNSVCFHPS-GLAFATGSEDKTARLFDIRADQQIATYLPP 1907 (2004)
Q Consensus 1837 ~~LaSGS~DGsIrIWDlrs~k~I~tl~~--------h~s~ItsIafSPd-g~~LaSgS~DGtIrIWDLrtgk~i~t~~~~ 1907 (2004)
+..++|+.+|.+++|+....+....+.- ....|+++.|.|. ...+++.+.|..|+|||.++...+.++...
T Consensus 464 k~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~ 543 (712)
T KOG0283|consen 464 KGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGF 543 (712)
T ss_pred ceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhccc
Confidence 9999999999999999988776554421 1237999999984 345888889999999999888888888765
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1908 NKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1908 ~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
.....-....|+.||++|++|++|..|++|+.
T Consensus 544 ~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~ 575 (712)
T KOG0283|consen 544 RNTSSQISASFSSDGKHIVSASEDSWVYIWKN 575 (712)
T ss_pred ccCCcceeeeEccCCCEEEEeecCceEEEEeC
Confidence 55555677899999999999999999999997
No 56
>KOG0278|consensus
Probab=99.94 E-value=8.2e-26 Score=249.73 Aligned_cols=289 Identities=20% Similarity=0.318 Sum_probs=258.6
Q ss_pred ccccccccceeEEEEe---CCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEE
Q psy8748 1686 KSLKGHINKVNSVHYS---GDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYD 1762 (2004)
Q Consensus 1686 ~sL~GHt~~VtsLaFS---PDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWD 1762 (2004)
.+-.||+.+|-.++|| |+|-+|++++.||.-.+-+-++|.-+.++.+|.+.|.+.+.+.+...-++++.|-+-++||
T Consensus 8 l~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~ 87 (334)
T KOG0278|consen 8 LTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWD 87 (334)
T ss_pred eEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhh
Confidence 3567999999999999 5888999999999999999999999999999999999999998888999999999999999
Q ss_pred cCCCCCCCcceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEE
Q psy8748 1763 LNNRDSTGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVT 1841 (2004)
Q Consensus 1763 l~t~~~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaS 1841 (2004)
.-++.... ...|...|..++|+ +.+++++|+.+..+++||++..+.....+.+|.+.|..+.|....+.|++
T Consensus 88 a~tgdelh-------sf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLS 160 (334)
T KOG0278|consen 88 AVTGDELH-------SFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILS 160 (334)
T ss_pred hhhhhhhh-------hhhhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEe
Confidence 87764222 23577889999999 45679999999999999999887776777899999999999999999999
Q ss_pred EECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCC
Q psy8748 1842 GSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSS 1921 (2004)
Q Consensus 1842 GS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPd 1921 (2004)
++.|++|++||.+++..++++. ...+|+++.++++|.++.++ ..+.|.+||..+...+..+..+ ..|.+...+|+
T Consensus 161 Sadd~tVRLWD~rTgt~v~sL~-~~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P---~nV~SASL~P~ 235 (334)
T KOG0278|consen 161 SADDKTVRLWDHRTGTEVQSLE-FNSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMP---CNVESASLHPK 235 (334)
T ss_pred eccCCceEEEEeccCcEEEEEe-cCCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCc---cccccccccCC
Confidence 9999999999999999998884 47889999999999877665 5778999999999988888544 45899999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeEEE-ccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeE
Q psy8748 1922 GRYIFCGSDDNNVHVWDLLKTTHNGVL-SGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIV 1986 (2004)
Q Consensus 1922 G~~LaSGSsDGsIrIWDL~tge~l~tL-~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l 1986 (2004)
...+++|+.|+.++.||..+++.+..+ ++|.++|.|+.|+|||..-++|+.||+|++|...-++.
T Consensus 236 k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 236 KEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGKT 301 (334)
T ss_pred CceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCCc
Confidence 999999999999999999999999886 89999999999999999999999999999999876643
No 57
>KOG3613|consensus
Probab=99.94 E-value=2e-27 Score=312.84 Aligned_cols=201 Identities=32% Similarity=0.402 Sum_probs=169.7
Q ss_pred hHHHHHHHHHhhhchhhHHHHHHHHHHHHhcc-CccccccCC-cchHHhhhcCCCccc-cccCCCCCCCCCcchhhHHHH
Q psy8748 26 NHVCYLADLLGRCKVQKVTLHCILASVISAAR-KPAKVAVGG-NFVQEILSFNSVEDE-DVKNNNSGGSGVSSQCLTLQI 102 (2004)
Q Consensus 26 ~~~~~~~~~l~~~k~q~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~q~ 102 (2004)
.++.||++||.|||+|||++|||+|+|++.++ +..+.+.++ ...+++++.|-.++. .+++ ++|+
T Consensus 848 ~~~~~i~~ll~r~K~qk~~l~~llss~~s~~~~~~~~~n~k~~~~~~~~~S~~l~~d~ql~~~-------------~~q~ 914 (1749)
T KOG3613|consen 848 KFVEFISTLLCRIKLQKVILHSLLSSLCSLQKTLGLKDNIKSGTLAELILSINLGLDIQLNED-------------SLQA 914 (1749)
T ss_pred cHHHHHHHHHHhhhhhHHHHHHHHHHHHHhHHHhccccccCCCccHHHHHhhchhhhhhhchh-------------HHHH
Confidence 46889999999999999999999999999887 666666655 667777775554443 3335 8999
Q ss_pred HHHHHHHHHHhHhhhhcccCCCCCCCCCCccccccCCCCC------CCCCCcccCCCcchHHHHHHHhccCcCccccchh
Q psy8748 103 QLLKLLLSALILEHEVNTKRGEVEPSPPSLSSVDLTGNDP------KYYPGRIIPQQPMFLCALARALESNPGLRASHQH 176 (2004)
Q Consensus 103 ~ll~~~~~~~~le~~~~~~~~~~~~~~~~~~~~~~~~~~~------~y~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 176 (2004)
+||+|++.+|+|||+|+..+++.+.++.+|..+-+.-... +|++++++.+|+||++||+|||++ + +++||+
T Consensus 915 ~Ll~llq~~i~le~~v~~~~e~~~~~~~s~~~~~~~~~~~~~~~ld~~~~~~~~~~~~lfl~~vv~~L~~-~--~~~h~~ 991 (1749)
T KOG3613|consen 915 ELLFLLQIAIVLEHEVGRLPESRSNSFDSFVSDSLEMLHSGAIRLDQYDDPASILYQGLFLLAVVRALKD-G--PGLHPM 991 (1749)
T ss_pred HHHHHHHHHHHHHHHhccccccccccHHHHHHHHHHhchhcCcchhhccCchHHHHHHHHHHHHHHhccc-C--CCCCHH
Confidence 9999999999999999999999998888655554433332 999999999999999999999977 3 999999
Q ss_pred hhHHhhhcccccCccccchHHHHHHHHHhcHHHHHHHHhhhcccccccccccccccccCcchhhccccccc
Q psy8748 177 WTTMLTCALPYLGKSLTTVVKVAIKALCANVDYLAEVYSVQNENKLKTKYAHSELSNISDTLFSKISDGKR 247 (2004)
Q Consensus 177 w~~~~~~~l~~~~~~l~~~~~~~~~~~c~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (2004)
|+.+||.+|||+||||+|+|+++++|||+|+|++.++|+.+. .+|-.++=..+||||+++.+||--
T Consensus 992 w~~lIt~sLp~~~~sL~~~vv~~v~qLcknvd~l~~~~~~~~-----~~~~~~~~~~~p~d~~l~~Le~Lt 1057 (1749)
T KOG3613|consen 992 WLILITESLPYFGKSLQRIVVPVVVQLCKNVDRLKKQYESEY-----GKSPDDPADYIPPDYLLTLLEGLT 1057 (1749)
T ss_pred HHHHHHHHHHHHHhhhheeehhhHHHHHHHHHHHHHHHhhcc-----CCCCCchhhhCChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999998643 233344444899999999998854
No 58
>KOG0316|consensus
Probab=99.93 E-value=1.9e-24 Score=237.62 Aligned_cols=282 Identities=21% Similarity=0.271 Sum_probs=240.3
Q ss_pred CCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCC
Q psy8748 1552 EPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTS 1631 (2004)
Q Consensus 1552 e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdg 1631 (2004)
..|+++|+++.|+-||+|..+ ++.|.+||+|+... +.+
T Consensus 14 ~~~qgaV~avryN~dGnY~lt-cGsdrtvrLWNp~r-------------g~l---------------------------- 51 (307)
T KOG0316|consen 14 DCAQGAVRAVRYNVDGNYCLT-CGSDRTVRLWNPLR-------------GAL---------------------------- 51 (307)
T ss_pred cccccceEEEEEccCCCEEEE-cCCCceEEeecccc-------------cce----------------------------
Confidence 348889999999999999999 99999999999766 222
Q ss_pred cchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEe
Q psy8748 1632 SINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGS 1711 (2004)
Q Consensus 1632 Sidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS 1711 (2004)
++++.||...|..++.+.|...+++||
T Consensus 52 -----------------------------------------------------iktYsghG~EVlD~~~s~Dnskf~s~G 78 (307)
T KOG0316|consen 52 -----------------------------------------------------IKTYSGHGHEVLDAALSSDNSKFASCG 78 (307)
T ss_pred -----------------------------------------------------eeeecCCCceeeeccccccccccccCC
Confidence 445667888999999999999999999
Q ss_pred CCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe
Q psy8748 1712 LDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI 1791 (2004)
Q Consensus 1712 ~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs 1791 (2004)
.|..+.+||+.+|+..+.+.+|.+.|+.+.|+.+...+++|+.|..+++||.+.. ..++++.+....+.|.++...
T Consensus 79 gDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~----s~ePiQildea~D~V~Si~v~ 154 (307)
T KOG0316|consen 79 GDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSR----SFEPIQILDEAKDGVSSIDVA 154 (307)
T ss_pred CCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccC----CCCccchhhhhcCceeEEEec
Confidence 9999999999999999999999999999999999999999999999999999875 456666677777777777653
Q ss_pred CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeE-
Q psy8748 1792 DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVN- 1870 (2004)
Q Consensus 1792 dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~It- 1870 (2004)
+..+++|+.||+++.||++.|+.... ....+|+|++|++++++.++++.|+++++.|-.+|+.+..+++|...-.
T Consensus 155 -~heIvaGS~DGtvRtydiR~G~l~sD---y~g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eyk 230 (307)
T KOG0316|consen 155 -EHEIVAGSVDGTVRTYDIRKGTLSSD---YFGHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYK 230 (307)
T ss_pred -ccEEEeeccCCcEEEEEeecceeehh---hcCCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceee
Confidence 55799999999999999999987633 3456899999999999999999999999999999999999999976543
Q ss_pred -EEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy8748 1871 -SVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWD 1938 (2004)
Q Consensus 1871 -sIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWD 1938 (2004)
..++.....++++|++||.|++||+.....+..+.... .-.++.+.++|....++++... .+..|-
T Consensus 231 ldc~l~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~-~v~v~dl~~hp~~~~f~~A~~~-~~~~~~ 297 (307)
T KOG0316|consen 231 LDCCLNQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVS-TVIVTDLSCHPTMDDFITATGH-GDLFWY 297 (307)
T ss_pred eeeeecccceeEEeccCCceEEEEEeccceeeeeeccCC-ceeEEeeecccCccceeEecCC-ceecee
Confidence 44667777899999999999999999988888874332 2347899999987777776544 455554
No 59
>KOG0643|consensus
Probab=99.93 E-value=4.7e-24 Score=238.24 Aligned_cols=288 Identities=18% Similarity=0.307 Sum_probs=241.0
Q ss_pred ccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCC
Q psy8748 1686 KSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNN 1765 (2004)
Q Consensus 1686 ~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t 1765 (2004)
..|+||..+++.+.|+.+|.+|.+++.|.+..||-..+|+.+.++.+|.+.|.|+..+.+.+.+++|+.|.++++||+++
T Consensus 4 i~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~t 83 (327)
T KOG0643|consen 4 ILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVET 83 (327)
T ss_pred cccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCC
Confidence 35789999999999999999999999999999999889999999999999999999999999999999999999999987
Q ss_pred CCCCCcceEEEEEecCccceeeeEEeCCCcEEEeec------CCeEEEEECCC-------CceeEEeeccccCCeEEEEE
Q psy8748 1766 RDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSG------DMKIVTWNLET-------GQRIHEVAQAHIGDVVSISL 1832 (2004)
Q Consensus 1766 ~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~------DGtI~IWDl~t-------g~~i~~il~~h~~~ItsLaf 1832 (2004)
++ .+.. ......+..+.|+.++.++..+. .+.|.++|++. .++..++ ..+...++..-|
T Consensus 84 Gk------~la~-~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI-~t~~skit~a~W 155 (327)
T KOG0643|consen 84 GK------QLAT-WKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKI-PTPDSKITSALW 155 (327)
T ss_pred Cc------EEEE-eecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEe-cCCccceeeeee
Confidence 64 2222 23456788889986655444433 36799999983 3334333 456688999999
Q ss_pred CCCCCEEEEEECCCeEEEEECCCCe-EEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCC
Q psy8748 1833 SPDGQYFVTGSVDKSCKLWDFREKK-CVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNS 1911 (2004)
Q Consensus 1833 SPdg~~LaSGS~DGsIrIWDlrs~k-~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s 1911 (2004)
.|-+.+|++|..||.|.+||.+++. .+.....|...|+.+++++|..++++++.|.+-++||..+...+.++. ...
T Consensus 156 g~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~---te~ 232 (327)
T KOG0643|consen 156 GPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYT---TER 232 (327)
T ss_pred cccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEee---ecc
Confidence 9999999999999999999999974 456667899999999999999999999999999999999999999884 346
Q ss_pred CeEEEEEcCCCCEEEEEeCCCe--E------------EEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEE
Q psy8748 1912 GFTSCAVSSSGRYIFCGSDDNN--V------------HVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVK 1977 (2004)
Q Consensus 1912 ~ItsLafSPdG~~LaSGSsDGs--I------------rIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIr 1977 (2004)
++.+.+++|...+++.|+...- | ++|++-..+.+..+++|-++|++++|+|+|+..++||.||.|+
T Consensus 233 PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR 312 (327)
T KOG0643|consen 233 PVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVR 312 (327)
T ss_pred cccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEE
Confidence 7999999998888877754321 2 2223223345667789999999999999999999999999999
Q ss_pred EEECCCC
Q psy8748 1978 VWQESNT 1984 (2004)
Q Consensus 1978 IWdlstg 1984 (2004)
+..++..
T Consensus 313 ~h~Fd~~ 319 (327)
T KOG0643|consen 313 LHHFDSN 319 (327)
T ss_pred EEEeccc
Confidence 9877654
No 60
>KOG0288|consensus
Probab=99.93 E-value=3.3e-25 Score=258.80 Aligned_cols=290 Identities=21% Similarity=0.363 Sum_probs=253.4
Q ss_pred ccccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCc--eEEEeeCCCCceEEEEEecCCCEEEEeecCCe
Q psy8748 1680 VKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGN--KTQVIPLRSAWVMSVAFAQSGNFVACGGMDNM 1757 (2004)
Q Consensus 1680 lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk--~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGt 1757 (2004)
++......+..|.+.|..+.|-++...|++||.|..|++|+...++ .+.++.+..+.|+++.|.+++..+++++.|+.
T Consensus 163 lpS~~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~ 242 (459)
T KOG0288|consen 163 LPSRALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKN 242 (459)
T ss_pred cchhhhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCc
Confidence 4556677899999999999999998999999999999999987665 66778888899999999999999999999999
Q ss_pred EEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCc-EEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCC
Q psy8748 1758 CTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTT-LLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDG 1836 (2004)
Q Consensus 1758 IrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~-LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg 1836 (2004)
+++|+++.. ....++.+|.+.++++.|..+.. +++|+.|.+|+.||+....+...++.+ ..+..|+.+ +
T Consensus 243 ~r~Wnvd~~------r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~--S~cnDI~~~--~ 312 (459)
T KOG0288|consen 243 LRLWNVDSL------RLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPG--SQCNDIVCS--I 312 (459)
T ss_pred eeeeeccch------hhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecccccc--ccccceEec--c
Confidence 999999754 56678889999999999986554 999999999999999998887666433 335555554 5
Q ss_pred CEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCC--CCCeE
Q psy8748 1837 QYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNK--NSGFT 1914 (2004)
Q Consensus 1837 ~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~--~s~It 1914 (2004)
..+++|..|++|++||.+...+......+. .|+++..+++|..+.+++.|.++.+.|+++......+...+. ....+
T Consensus 313 ~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwt 391 (459)
T KOG0288|consen 313 SDVISGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWT 391 (459)
T ss_pred eeeeecccccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccc
Confidence 678899999999999999999988887655 999999999999999999999999999999888877754432 24578
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCC--CeEEEEEcCCCCEEEEEECCCeEEEEE
Q psy8748 1915 SCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHEN--RVTSISLSPNGMALVTSSWDQFVKVWQ 1980 (2004)
Q Consensus 1915 sLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~--~VtsLaFSPDg~~LaSgS~DGtIrIWd 1980 (2004)
.+.|||++.|+++|+.||.|+||++.++++.+.+..... .|++++|+|.|..+++++.++.+.+|.
T Consensus 392 rvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 392 RVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred eeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEecC
Confidence 999999999999999999999999999999999876544 599999999999999999999999993
No 61
>KOG0313|consensus
Probab=99.93 E-value=3.2e-24 Score=248.64 Aligned_cols=285 Identities=24% Similarity=0.353 Sum_probs=240.7
Q ss_pred ccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCC---EEEEeecCCeEEEEEcCCC
Q psy8748 1690 GHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGN---FVACGGMDNMCTVYDLNNR 1766 (2004)
Q Consensus 1690 GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~---~LaSGS~DGtIrVWDl~t~ 1766 (2004)
-|.+.|.++... ++++++|++||.+++|| ..|+....+.+|.++|.+++|.-... .|++++.|.++++|.++.+
T Consensus 103 ~hdDWVSsv~~~--~~~IltgsYDg~~riWd-~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~ 179 (423)
T KOG0313|consen 103 LHDDWVSSVKGA--SKWILTGSYDGTSRIWD-LKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVG 179 (423)
T ss_pred cchhhhhhhccc--CceEEEeecCCeeEEEe-cCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCc
Confidence 389999999987 78999999999999999 58999999999999999999865433 6999999999999999876
Q ss_pred CCCCcceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCc------------------------eeEEeec
Q psy8748 1767 DSTGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQ------------------------RIHEVAQ 1821 (2004)
Q Consensus 1767 ~~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~------------------------~i~~il~ 1821 (2004)
+.. .+......||...|.++... ++.++++|+.|..|.+|+..+.. .....+.
T Consensus 180 ~~~--~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~ 257 (423)
T KOG0313|consen 180 ENK--VKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLE 257 (423)
T ss_pred hhh--hhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEec
Confidence 432 23333445999999999965 66789999999999999932110 1123367
Q ss_pred cccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCce-
Q psy8748 1822 AHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQ- 1900 (2004)
Q Consensus 1822 ~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~- 1900 (2004)
+|..+|.++.|++ ...+++++.|.+|+.||+.++..+.++.+ ...+.|+.++|..+.+++|+.|..+++||.+++.-
T Consensus 258 GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs 335 (423)
T KOG0313|consen 258 GHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGS 335 (423)
T ss_pred ccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccceeeecCCCCceeecCCCCCCCc
Confidence 8999999999997 67899999999999999999998887754 56799999999999999999999999999987643
Q ss_pred eEEEcCCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEECCCCe-eeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEE
Q psy8748 1901 IATYLPPNKNSGFTSCAVSSS-GRYIFCGSDDNNVHVWDLLKTT-HNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKV 1978 (2004)
Q Consensus 1901 i~t~~~~~~~s~ItsLafSPd-G~~LaSGSsDGsIrIWDL~tge-~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrI 1978 (2004)
+......+|...|..+.|+|. ...|++|+.||++++||+++.. ++..+.+|.+.|.++.|. ++..+++||.|.+|+|
T Consensus 336 ~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~-~~~~IvSGGaD~~l~i 414 (423)
T KOG0313|consen 336 VVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWN-EGGLIVSGGADNKLRI 414 (423)
T ss_pred eeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEecc-CCceEEeccCcceEEE
Confidence 344445678889999999995 5668899999999999999887 999999999999999997 5568999999999999
Q ss_pred EECC
Q psy8748 1979 WQES 1982 (2004)
Q Consensus 1979 Wdls 1982 (2004)
+.-.
T Consensus 415 ~~~~ 418 (423)
T KOG0313|consen 415 FKGS 418 (423)
T ss_pred eccc
Confidence 9754
No 62
>KOG1407|consensus
Probab=99.93 E-value=1e-23 Score=235.18 Aligned_cols=277 Identities=19% Similarity=0.233 Sum_probs=243.8
Q ss_pred ccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE--eeCCCCceEEEEEec-CCCEEEEeecCCeEEEEE
Q psy8748 1686 KSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQV--IPLRSAWVMSVAFAQ-SGNFVACGGMDNMCTVYD 1762 (2004)
Q Consensus 1686 ~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~t--i~~Ht~~ItsLafSP-dg~~LaSGS~DGtIrVWD 1762 (2004)
+.+++|...|.+++|+.+|..|++|+.|+++.||++..++.... ..+|.+.|-.++|+| +.+.+++++.|..|++||
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd 93 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD 93 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence 67889999999999999999999999999999999987755443 468999999999998 567999999999999999
Q ss_pred cCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEE
Q psy8748 1763 LNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTG 1842 (2004)
Q Consensus 1763 l~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSG 1842 (2004)
+..+ +.........+.+....+.+++++++++.|..|.+.|.++.+..... .....+.-++|+-++.+|+..
T Consensus 94 ~r~~------k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~--~~~~e~ne~~w~~~nd~Fflt 165 (313)
T KOG1407|consen 94 IRSG------KCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEE--QFKFEVNEISWNNSNDLFFLT 165 (313)
T ss_pred eccC------cEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehh--cccceeeeeeecCCCCEEEEe
Confidence 9854 45555556666677666778889999999999999999988776443 445668889999888888877
Q ss_pred ECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCC
Q psy8748 1843 SVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSG 1922 (2004)
Q Consensus 1843 S~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG 1922 (2004)
...|.|.|.....-+++..+++|.....||.|+|+|++|++|+.|..+.+||+...-+...+ .....+|..+.|+.||
T Consensus 166 ~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~i--sRldwpVRTlSFS~dg 243 (313)
T KOG1407|consen 166 NGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCI--SRLDWPVRTLSFSHDG 243 (313)
T ss_pred cCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheee--ccccCceEEEEeccCc
Confidence 77899999999999999999999999999999999999999999999999999988777777 4556789999999999
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECC
Q psy8748 1923 RYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWD 1973 (2004)
Q Consensus 1923 ~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~D 1973 (2004)
++||+|++|..|-|=++++|..+..+. +.++-..++|+|...+||-+++|
T Consensus 244 ~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 244 RMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred ceeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCCCceeeEEecC
Confidence 999999999999999999999999887 78999999999999999988765
No 63
>KOG0313|consensus
Probab=99.92 E-value=6e-24 Score=246.44 Aligned_cols=283 Identities=27% Similarity=0.405 Sum_probs=239.2
Q ss_pred CCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCcc
Q psy8748 1554 CKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSSI 1633 (2004)
Q Consensus 1554 Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgSi 1633 (2004)
|.+.|.+|... ++++.| |++||+++|||... +
T Consensus 104 hdDWVSsv~~~--~~~Ilt-gsYDg~~riWd~~G--------------k------------------------------- 135 (423)
T KOG0313|consen 104 HDDWVSSVKGA--SKWILT-GSYDGTSRIWDLKG--------------K------------------------------- 135 (423)
T ss_pred chhhhhhhccc--CceEEE-eecCCeeEEEecCC--------------c-------------------------------
Confidence 88899999998 899999 99999999999765 1
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCC---CCEEEEE
Q psy8748 1634 NIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGD---SRHCVSG 1710 (2004)
Q Consensus 1634 di~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPD---G~~LASG 1710 (2004)
..+.+.||+++|.+++|.-. ...++++
T Consensus 136 --------------------------------------------------~~~~~~Ght~~ik~v~~v~~n~~~~~fvsa 165 (423)
T KOG0313|consen 136 --------------------------------------------------SIKTIVGHTGPIKSVAWVIKNSSSCLFVSA 165 (423)
T ss_pred --------------------------------------------------eEEEEecCCcceeeeEEEecCCccceEEEe
Confidence 23456789999998888632 2369999
Q ss_pred eCCCeEEEEECCCCceE----EEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCC-------------------
Q psy8748 1711 SLDGKLIIWDTWTGNKT----QVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRD------------------- 1767 (2004)
Q Consensus 1711 S~DGtIrVWDl~Tgk~l----~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~------------------- 1767 (2004)
+.|.++++|.++.++.. ..-.+|...|.++...++|..+++|+.|..+++|+.....
T Consensus 166 s~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~ 245 (423)
T KOG0313|consen 166 SMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREK 245 (423)
T ss_pred cCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhh
Confidence 99999999998877543 2335899999999999999999999999999999933211
Q ss_pred CCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCe
Q psy8748 1768 STGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKS 1847 (2004)
Q Consensus 1768 ~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGs 1847 (2004)
.......+..+.+|...|.++.|.+...+++++.|.+|+.||+.++.....+. ....+.|+..+|..+++++|+.|..
T Consensus 246 ~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~--~~ksl~~i~~~~~~~Ll~~gssdr~ 323 (423)
T KOG0313|consen 246 EGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLT--TNKSLNCISYSPLSKLLASGSSDRH 323 (423)
T ss_pred cccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccceeeee--cCcceeEeecccccceeeecCCCCc
Confidence 11234456778999999999999999999999999999999999999886663 4567999999999999999999999
Q ss_pred EEEEECCCCe---EEEEEecCCCCeEEEEEeCCC-CEEEEEECCCeEEEEEccCCc-eeEEEcCCCCCCCeEEEEEcCCC
Q psy8748 1848 CKLWDFREKK---CVQTFFGHEADVNSVCFHPSG-LAFATGSEDKTARLFDIRADQ-QIATYLPPNKNSGFTSCAVSSSG 1922 (2004)
Q Consensus 1848 IrIWDlrs~k---~I~tl~~h~s~ItsIafSPdg-~~LaSgS~DGtIrIWDLrtgk-~i~t~~~~~~~s~ItsLafSPdG 1922 (2004)
|++||.+++. ....+.+|...|.++.|+|.. ..|++|+.||++++||+++.+ .+..+ ..|...|.++.|. ++
T Consensus 324 irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI--~~h~DKvl~vdW~-~~ 400 (423)
T KOG0313|consen 324 IRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDI--AGHNDKVLSVDWN-EG 400 (423)
T ss_pred eeecCCCCCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceee--ccCCceEEEEecc-CC
Confidence 9999998653 456788999999999999955 468999999999999999887 67666 5667889999997 46
Q ss_pred CEEEEEeCCCeEEEEEC
Q psy8748 1923 RYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1923 ~~LaSGSsDGsIrIWDL 1939 (2004)
..|++|+.|++|+|+..
T Consensus 401 ~~IvSGGaD~~l~i~~~ 417 (423)
T KOG0313|consen 401 GLIVSGGADNKLRIFKG 417 (423)
T ss_pred ceEEeccCcceEEEecc
Confidence 78999999999999874
No 64
>KOG0305|consensus
Probab=99.92 E-value=7.7e-24 Score=260.86 Aligned_cols=278 Identities=23% Similarity=0.404 Sum_probs=244.0
Q ss_pred eeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceE
Q psy8748 1695 VNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKV 1774 (2004)
Q Consensus 1695 VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~ 1774 (2004)
.+-+.|+ ..+.+|+|. +..|++|+..++........+...|+++.|+++|.+|++|..+|.|.+||.... +.
T Consensus 180 ~nlldWs-s~n~laVal-g~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~------k~ 251 (484)
T KOG0305|consen 180 LNLLDWS-SANVLAVAL-GQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQ------KK 251 (484)
T ss_pred hhHhhcc-cCCeEEEEe-cceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhc------cc
Confidence 3457788 344566664 458999999999977777777899999999999999999999999999998754 34
Q ss_pred EEEEec-CccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy8748 1775 IRELLG-YEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDF 1853 (2004)
Q Consensus 1775 i~sl~g-h~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDl 1853 (2004)
...+.+ |...|.+++|. ...+.+|+.+|.|..+|++..+.......+|...|..++|++|++++++|+.|+.+.|||.
T Consensus 252 ~~~~~~~h~~rvg~laW~-~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~ 330 (484)
T KOG0305|consen 252 TRTLRGSHASRVGSLAWN-SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDG 330 (484)
T ss_pred cccccCCcCceeEEEecc-CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccC
Confidence 455556 89999999998 6778999999999999999888776667889999999999999999999999999999999
Q ss_pred CCCeEEEEEecCCCCeEEEEEeC-CCCEEEEEE--CCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEE--
Q psy8748 1854 REKKCVQTFFGHEADVNSVCFHP-SGLAFATGS--EDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCG-- 1928 (2004)
Q Consensus 1854 rs~k~I~tl~~h~s~ItsIafSP-dg~~LaSgS--~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSG-- 1928 (2004)
....+...+..|...|.+++|+| ....||+|+ .|+.|++||..++..+... .....|..+.|++..+-|+++
T Consensus 331 ~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~v---dtgsQVcsL~Wsk~~kEi~sthG 407 (484)
T KOG0305|consen 331 LSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSV---DTGSQVCSLIWSKKYKELLSTHG 407 (484)
T ss_pred CCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccc---ccCCceeeEEEcCCCCEEEEecC
Confidence 88889999999999999999999 566788865 5899999999999988776 455789999999998777754
Q ss_pred eCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1929 SDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1929 SsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
..++.|.||+..+.+.+..+.+|..+|..++++|||..+++|+.|.++++|++-+.
T Consensus 408 ~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 408 YSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred CCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 45778999999999999999999999999999999999999999999999998764
No 65
>KOG1063|consensus
Probab=99.92 E-value=1.6e-23 Score=256.19 Aligned_cols=420 Identities=17% Similarity=0.251 Sum_probs=282.2
Q ss_pred CCCCCCCeEEEEEccCCC---EEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCcccccccc
Q psy8748 1551 PEPCKEQRNAVSFHACST---LLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMM 1627 (2004)
Q Consensus 1551 ~e~Hk~~VtsVsFSPdGk---~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~ 1627 (2004)
..+|+..|+|+.+-|+.+ +++| |+.||.|++|.+.. ....+..+++++...+.+...........
T Consensus 50 l~GH~a~VnC~~~l~~s~~~a~~vs-G~sD~~v~lW~l~~-----------~~~~~i~~~~g~~~~~~cv~a~~~~~~~~ 117 (764)
T KOG1063|consen 50 LDGHVARVNCVHWLPTSEIVAEMVS-GDSDGRVILWKLRD-----------EYLIKIYTIQGHCKECVCVVARSSVMTCK 117 (764)
T ss_pred ccCCccceEEEEEcccccccceEEE-ccCCCcEEEEEEee-----------hheEEEEeecCcceeEEEEEeeeeEEEee
Confidence 456999999999999998 8999 99999999999974 12344555555433322211111000001
Q ss_pred CCCCcchhhhhHhHH-----HHHHHHHHH----HHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEE
Q psy8748 1628 KPTSSINIYLKLQTA-----ELKKELTQL----IDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSV 1698 (2004)
Q Consensus 1628 spdgSidi~i~~~~~-----ql~k~i~ql----~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsL 1698 (2004)
..++.+..+-....+ .++...... .........-..................-++....++.||++.|.++
T Consensus 118 ~ad~~v~vw~~~~~e~~~~~~~rf~~k~~ipLcL~~~~~~~~~lla~Ggs~~~v~~~s~~~d~f~~v~el~GH~DWIrsl 197 (764)
T KOG1063|consen 118 AADGTVSVWDKQQDEVFLLAVLRFEIKEAIPLCLAALKNNKTFLLACGGSKFVVDLYSSSADSFARVAELEGHTDWIRSL 197 (764)
T ss_pred ccCceEEEeecCCCceeeehheehhhhhHhhHHHhhhccCCcEEEEecCcceEEEEeccCCcceeEEEEeeccchhhhhh
Confidence 233333332221111 111122221 21111000000000001100011111122667888999999999999
Q ss_pred EEeCCCC---EEEEEeCCCeEEEEECCCCc---------------------eEEE----------eeCCCCceEEEEEec
Q psy8748 1699 HYSGDSR---HCVSGSLDGKLIIWDTWTGN---------------------KTQV----------IPLRSAWVMSVAFAQ 1744 (2004)
Q Consensus 1699 aFSPDG~---~LASGS~DGtIrVWDl~Tgk---------------------~l~t----------i~~Ht~~ItsLafSP 1744 (2004)
+|...+. +||++|.|..||||.+.-+. .... +.+|+++|+++.|+|
T Consensus 198 ~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeDWV~sv~W~p 277 (764)
T KOG1063|consen 198 AFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVFMILEEIQYRISFEALLMGHEDWVYSVWWHP 277 (764)
T ss_pred hhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCceeeeeeeEEEEEehhhhhcCcccceEEEEEcc
Confidence 9986444 89999999999999754222 1111 238999999999999
Q ss_pred CCCEEEEeecCCeEEEEEcCCCCCCCcce-EEEEEecCccceeeeEEeC-CCcEEEeecCCeEEEEECCCCc--eeEEee
Q psy8748 1745 SGNFVACGGMDNMCTVYDLNNRDSTGAAK-VIRELLGYEGFLSSCRFID-DTTLLTGSGDMKIVTWNLETGQ--RIHEVA 1820 (2004)
Q Consensus 1745 dg~~LaSGS~DGtIrVWDl~t~~~~~~~k-~i~sl~gh~~~Vssvafsd-d~~LlSgS~DGtI~IWDl~tg~--~i~~il 1820 (2004)
.+..|++++.|.++.+|..++........ .+....+.......+.|++ ++.+++-+..|..++|...... ......
T Consensus 278 ~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~hlWkt~d~~~w~~~~~i 357 (764)
T KOG1063|consen 278 EGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFHLWKTKDKTFWTQEPVI 357 (764)
T ss_pred chhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEEEEeccCccceeecccc
Confidence 99999999999999999887542111111 1112223344566666764 4568888899999999833221 223346
Q ss_pred ccccCCeEEEEECCCCCEEEEEECCCeEEEEECC-------------------------C----------CeE-------
Q psy8748 1821 QAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFR-------------------------E----------KKC------- 1858 (2004)
Q Consensus 1821 ~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlr-------------------------s----------~k~------- 1858 (2004)
.+|.+.|++++|+|.|.++++.+.|-+-|+|-.- + .+.
T Consensus 358 SGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~FVSgAdEKVlRvF~aP 437 (764)
T KOG1063|consen 358 SGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQFVSGADEKVLRVFEAP 437 (764)
T ss_pred ccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCceeeecccceeeeeecCc
Confidence 7899999999999999999999988766665211 0 000
Q ss_pred --------------------------------------------------------------------------------
Q psy8748 1859 -------------------------------------------------------------------------------- 1858 (2004)
Q Consensus 1859 -------------------------------------------------------------------------------- 1858 (2004)
T Consensus 438 k~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ePP~EdqLq~~tLwPE 517 (764)
T KOG1063|consen 438 KSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELTEPPTEDQLQQNTLWPE 517 (764)
T ss_pred HHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhccCCChHHHHHHhccchh
Confidence
Q ss_pred EEEEecCCCCeEEEEEeCCCCEEEEEECCC-----eEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCe
Q psy8748 1859 VQTFFGHEADVNSVCFHPSGLAFATGSEDK-----TARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNN 1933 (2004)
Q Consensus 1859 I~tl~~h~s~ItsIafSPdg~~LaSgS~DG-----tIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGs 1933 (2004)
+..+.+|...|.+++.+|+|+.+++++... .|++|+..+......+ ..|.-.|+.++|+|||++|++.+.|.+
T Consensus 518 v~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L--~~HsLTVT~l~FSpdg~~LLsvsRDRt 595 (764)
T KOG1063|consen 518 VHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQEL--EGHSLTVTRLAFSPDGRYLLSVSRDRT 595 (764)
T ss_pred hHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhhee--cccceEEEEEEECCCCcEEEEeecCce
Confidence 011124788899999999999999998654 4999999988887755 567788999999999999999999999
Q ss_pred EEEEECCCCee----eEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1934 VHVWDLLKTTH----NGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1934 IrIWDL~tge~----l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
+.+|....... ....+.|+.-|.+..|+|++.+++|++.|.+|++|...++
T Consensus 596 ~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 596 VSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred EEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCc
Confidence 99998744322 2336789999999999999999999999999999999887
No 66
>KOG0283|consensus
Probab=99.92 E-value=5.6e-24 Score=267.00 Aligned_cols=293 Identities=19% Similarity=0.337 Sum_probs=221.4
Q ss_pred cccc-ccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCC----------CceEEEEEec---CCC--EE
Q psy8748 1686 KSLK-GHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRS----------AWVMSVAFAQ---SGN--FV 1749 (2004)
Q Consensus 1686 ~sL~-GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht----------~~ItsLafSP---dg~--~L 1749 (2004)
..+. +|.+.|+++.||+||+|||+||.||.|+||.+...+....-.+.. +.+..+.-++ .++ ..
T Consensus 260 Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 260 QEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred eccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 3455 899999999999999999999999999999876533311110000 0011111111 001 11
Q ss_pred EEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEE
Q psy8748 1750 ACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVS 1829 (2004)
Q Consensus 1750 aSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~Its 1829 (2004)
-.+..... .+.... ......+++..+.||.+.|..+.|+.+++|++++.|.+|++|++....++..+ .|...|+|
T Consensus 340 ~~~~~s~~-~~~p~~--~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F--~HndfVTc 414 (712)
T KOG0283|consen 340 RKGSQSPC-VLLPLK--AFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVF--SHNDFVTC 414 (712)
T ss_pred ccccCCcc-ccCCCc--cccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEE--ecCCeeEE
Confidence 11111111 111111 11223466788999999999999999999999999999999999999998666 79999999
Q ss_pred EEECC-CCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCC
Q psy8748 1830 ISLSP-DGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPN 1908 (2004)
Q Consensus 1830 LafSP-dg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~ 1908 (2004)
++|+| |.++|++|+-||.|+||++...+.+. +..-..-|++++|.|||++.++|+.+|.+++|+....+....+....
T Consensus 415 VaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~-W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~ 493 (712)
T KOG0283|consen 415 VAFNPVDDRYFISGSLDGKVRLWSISDKKVVD-WNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRL 493 (712)
T ss_pred EEecccCCCcEeecccccceEEeecCcCeeEe-ehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEee
Confidence 99999 88999999999999999998877554 44455889999999999999999999999999998777665552221
Q ss_pred C------CCCeEEEEEcCC-CCEEEEEeCCCeEEEEECCCCeeeEEEccCCC--CeEEEEEcCCCCEEEEEECCCeEEEE
Q psy8748 1909 K------NSGFTSCAVSSS-GRYIFCGSDDNNVHVWDLLKTTHNGVLSGHEN--RVTSISLSPNGMALVTSSWDQFVKVW 1979 (2004)
Q Consensus 1909 ~------~s~ItsLafSPd-G~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~--~VtsLaFSPDg~~LaSgS~DGtIrIW 1979 (2004)
+ ...|+.+.|.|. ...+++.+.|..|||||.++..++..++|+.. .-....|+.||++|+++++|..|++|
T Consensus 494 ~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW 573 (712)
T KOG0283|consen 494 HNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIW 573 (712)
T ss_pred ccCccccCceeeeeEecCCCCCeEEEecCCCceEEEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEE
Confidence 1 236999999984 34577778999999999988888888887543 34566899999999999999999999
Q ss_pred ECCCC
Q psy8748 1980 QESNT 1984 (2004)
Q Consensus 1980 dlstg 1984 (2004)
+.+..
T Consensus 574 ~~~~~ 578 (712)
T KOG0283|consen 574 KNDSF 578 (712)
T ss_pred eCCCC
Confidence 98543
No 67
>KOG0640|consensus
Probab=99.92 E-value=7.2e-24 Score=239.52 Aligned_cols=294 Identities=23% Similarity=0.359 Sum_probs=246.7
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCC------------C------ceEEEeeCCCCceEEEEEecCC
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWT------------G------NKTQVIPLRSAWVMSVAFAQSG 1746 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~T------------g------k~l~ti~~Ht~~ItsLafSPdg 1746 (2004)
...+..|++++++-+|++||.++|||+.|..|+|.|++. | -.++++..|...|+++.|+|..
T Consensus 105 t~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre 184 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRE 184 (430)
T ss_pred eEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchh
Confidence 456788999999999999999999999999999999761 1 2456778899999999999999
Q ss_pred CEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCC-cEEEeecCCeEEEEECCCCceeEEe--eccc
Q psy8748 1747 NFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQRIHEV--AQAH 1823 (2004)
Q Consensus 1747 ~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~~i~~i--l~~h 1823 (2004)
..|++|+.|++|++||+.........+. ......+.++.|++++ ++++|+....+++||+++-++.... ...|
T Consensus 185 ~ILiS~srD~tvKlFDfsK~saKrA~K~----~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qh 260 (430)
T KOG0640|consen 185 TILISGSRDNTVKLFDFSKTSAKRAFKV----FQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQH 260 (430)
T ss_pred heEEeccCCCeEEEEecccHHHHHHHHH----hhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCccccc
Confidence 9999999999999999976532222222 2335678899999654 5778888899999999998876443 3578
Q ss_pred cCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEe-cCC-CCeEEEEEeCCCCEEEEEECCCeEEEEEccCCcee
Q psy8748 1824 IGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFF-GHE-ADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQI 1901 (2004)
Q Consensus 1824 ~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~-~h~-s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i 1901 (2004)
.+.|+++.+++.|++.++|+.||.|++||--+++++.++. .|. ..|.+..|..+|+++++.+.|..+++|.+.+++.+
T Consensus 261 t~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l 340 (430)
T KOG0640|consen 261 TGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRML 340 (430)
T ss_pred ccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceE
Confidence 8999999999999999999999999999999999988874 454 47899999999999999999999999999999999
Q ss_pred EEEcCCCCCC---CeEEEEEcCCCCEEEEEeC-CCeEEEEECCCCeeeEEE-ccCCCCeEEEEEcCCCCEEEEEECCCeE
Q psy8748 1902 ATYLPPNKNS---GFTSCAVSSSGRYIFCGSD-DNNVHVWDLLKTTHNGVL-SGHENRVTSISLSPNGMALVTSSWDQFV 1976 (2004)
Q Consensus 1902 ~t~~~~~~~s---~ItsLafSPdG~~LaSGSs-DGsIrIWDL~tge~l~tL-~gHs~~VtsLaFSPDg~~LaSgS~DGtI 1976 (2004)
..+...+..+ --+...|+....|++.-++ .+.+.-||.+++..+..+ .+|.+.+..+.-+|.+..+++|+.|..+
T Consensus 341 ~~YtGAg~tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~ra 420 (430)
T KOG0640|consen 341 KEYTGAGTTGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRA 420 (430)
T ss_pred EEEecCCcccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeeccccee
Confidence 9986553322 2345667777888777654 578999999998777655 5899999999999999999999999999
Q ss_pred EEEECC
Q psy8748 1977 KVWQES 1982 (2004)
Q Consensus 1977 rIWdls 1982 (2004)
++|--.
T Consensus 421 RFWyrr 426 (430)
T KOG0640|consen 421 RFWYRR 426 (430)
T ss_pred eeeeec
Confidence 999654
No 68
>KOG0289|consensus
Probab=99.92 E-value=4.3e-23 Score=241.99 Aligned_cols=282 Identities=20% Similarity=0.289 Sum_probs=251.9
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcc
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAA 1772 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~ 1772 (2004)
.+|.++...|....++|||.|..+.++|..+++.+..+++|...|+.+.|+++...+++++.|..|+||......
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s----- 294 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS----- 294 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccccc-----
Confidence 578888888887899999999999999999999999999999999999999999999999999999999986532
Q ss_pred eEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeec-cccCCeEEEEECCCCCEEEEEECCCeEEE
Q psy8748 1773 KVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQ-AHIGDVVSISLSPDGQYFVTGSVDKSCKL 1850 (2004)
Q Consensus 1773 k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~-~h~~~ItsLafSPdg~~LaSGS~DGsIrI 1850 (2004)
.......|...|+.+..+ .+.++++++.||+..+.|++++..+..... ...-.+++.+|||||..|.+|+.||.++|
T Consensus 295 -~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vki 373 (506)
T KOG0289|consen 295 -EPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKI 373 (506)
T ss_pred -CccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEE
Confidence 344566788899998887 466899999999999999999998866543 23456899999999999999999999999
Q ss_pred EECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeC
Q psy8748 1851 WDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSD 1930 (2004)
Q Consensus 1851 WDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSs 1930 (2004)
||+.++..+..|.+|.++|..++|+.+|-++++++.|+.|++||+|..+...++..... .++.++.|++.|.++++++.
T Consensus 374 wdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~-~~v~s~~fD~SGt~L~~~g~ 452 (506)
T KOG0289|consen 374 WDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEK-KEVNSLSFDQSGTYLGIAGS 452 (506)
T ss_pred EEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeecccc-ccceeEEEcCCCCeEEeecc
Confidence 99999999999999999999999999999999999999999999999998888876554 47999999999999999988
Q ss_pred CCeEEEEEC--CCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Q psy8748 1931 DNNVHVWDL--LKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQE 1981 (2004)
Q Consensus 1931 DGsIrIWDL--~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdl 1981 (2004)
|=+|++++- .++.++..+..|.+..+++.|..+..+++++|.|..++++.+
T Consensus 453 ~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 453 DLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred eeEEEEEecccccceeeehhhhcccccceeeecccceEEeeccchhheEEeec
Confidence 777777763 467888888899999999999999999999999999988865
No 69
>KOG1407|consensus
Probab=99.92 E-value=7.5e-23 Score=228.29 Aligned_cols=274 Identities=20% Similarity=0.331 Sum_probs=231.5
Q ss_pred CCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCc
Q psy8748 1553 PCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSS 1632 (2004)
Q Consensus 1553 ~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgS 1632 (2004)
.|.+.|++|+|+.+|.+||+ |+.|+++++|++.. ++..+
T Consensus 18 ~~~~~v~Sv~wn~~g~~las-gs~dktv~v~n~e~-------------~r~~~--------------------------- 56 (313)
T KOG1407|consen 18 GHVQKVHSVAWNCDGTKLAS-GSFDKTVSVWNLER-------------DRFRK--------------------------- 56 (313)
T ss_pred hhhhcceEEEEcccCceeee-cccCCceEEEEecc-------------hhhhh---------------------------
Confidence 38889999999999999999 99999999999877 11000
Q ss_pred chhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeC-CCCEEEEEe
Q psy8748 1633 INIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSG-DSRHCVSGS 1711 (2004)
Q Consensus 1633 idi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSP-DG~~LASGS 1711 (2004)
....+||++.|-.++|+| ....+++++
T Consensus 57 ----------------------------------------------------~~~~~gh~~svdql~w~~~~~d~~atas 84 (313)
T KOG1407|consen 57 ----------------------------------------------------ELVYRGHTDSVDQLCWDPKHPDLFATAS 84 (313)
T ss_pred ----------------------------------------------------hhcccCCCcchhhheeCCCCCcceEEec
Confidence 113567999999999997 556899999
Q ss_pred CCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe
Q psy8748 1712 LDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI 1791 (2004)
Q Consensus 1712 ~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs 1791 (2004)
.|.+|++||+..+++...+....+.| -++|+|+|+++++++.|..|...|.++.+. .. .......+.-+.|.
T Consensus 85 ~dk~ir~wd~r~~k~~~~i~~~~eni-~i~wsp~g~~~~~~~kdD~it~id~r~~~~------~~-~~~~~~e~ne~~w~ 156 (313)
T KOG1407|consen 85 GDKTIRIWDIRSGKCTARIETKGENI-NITWSPDGEYIAVGNKDDRITFIDARTYKI------VN-EEQFKFEVNEISWN 156 (313)
T ss_pred CCceEEEEEeccCcEEEEeeccCcce-EEEEcCCCCEEEEecCcccEEEEEecccce------ee-hhcccceeeeeeec
Confidence 99999999999999999988766665 478999999999999999999999976432 11 12223344555665
Q ss_pred -CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeE
Q psy8748 1792 -DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVN 1870 (2004)
Q Consensus 1792 -dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~It 1870 (2004)
+++.++.....|.|.|.....-+.+.. +..|.....|+.|+|+|++|++|+.|..+.+||+...-+++.+..+.-+|+
T Consensus 157 ~~nd~Fflt~GlG~v~ILsypsLkpv~s-i~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVR 235 (313)
T KOG1407|consen 157 NSNDLFFLTNGLGCVEILSYPSLKPVQS-IKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVR 235 (313)
T ss_pred CCCCEEEEecCCceEEEEeccccccccc-cccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceE
Confidence 555677777779999999887777744 478999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCC
Q psy8748 1871 SVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDD 1931 (2004)
Q Consensus 1871 sIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsD 1931 (2004)
.+.|+.+|++|++|++|..|-|=++.+|..+..+ .+.++...++|+|...+||.+++|
T Consensus 236 TlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI---~~~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 236 TLSFSHDGRMLASASEDHFIDIAEVETGDRVWEI---PCEGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred EEEeccCcceeeccCccceEEeEecccCCeEEEe---eccCCceeEEecCCCceeeEEecC
Confidence 9999999999999999999999999999999988 455678899999999999987764
No 70
>KOG0268|consensus
Probab=99.91 E-value=2.5e-24 Score=247.99 Aligned_cols=285 Identities=17% Similarity=0.319 Sum_probs=231.2
Q ss_pred cccccccccceeEEEEeCCC-CEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEc
Q psy8748 1685 KKSLKGHINKVNSVHYSGDS-RHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDL 1763 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG-~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl 1763 (2004)
+..|.||.++|.|++=+|.. ..+++|+.||.|++||+.+..+..++..|.+.|.++++.. ..++++|.|.+|+.|.+
T Consensus 59 v~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~ 136 (433)
T KOG0268|consen 59 VGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKI 136 (433)
T ss_pred hhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeec
Confidence 56789999999999999977 6899999999999999999999999999999999999985 78899999999999998
Q ss_pred CCCCCCCcceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCC-CCEEEE
Q psy8748 1764 NNRDSTGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPD-GQYFVT 1841 (2004)
Q Consensus 1764 ~t~~~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPd-g~~LaS 1841 (2004)
+.. ...++.+ ...+..+... .++.++++|. .|.|||......+..+ .-....|.++.|+|. ...|++
T Consensus 137 ~~~-------p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~sm-swG~Dti~svkfNpvETsILas 205 (433)
T KOG0268|consen 137 DGP-------PLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSM-SWGADSISSVKFNPVETSILAS 205 (433)
T ss_pred cCC-------cceeeec-cccccccccccccccccccCc--eeeecccccCCcccee-ecCCCceeEEecCCCcchheee
Confidence 652 3344433 2333334333 2345666654 5899999887777554 344567999999995 456777
Q ss_pred EECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCC
Q psy8748 1842 GSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSS 1921 (2004)
Q Consensus 1842 GS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPd 1921 (2004)
++.|+.|.+||++++.+++.+. ....-+.|+|+|.+-.|++|++|..++.||++........ ..+|.+.|..++|+|.
T Consensus 206 ~~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v-~~dhvsAV~dVdfspt 283 (433)
T KOG0268|consen 206 CASDRSIVLYDLRQASPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNV-HKDHVSAVMDVDFSPT 283 (433)
T ss_pred eccCCceEEEecccCCccceee-eeccccceecCccccceeeccccccceehhhhhhcccchh-hcccceeEEEeccCCC
Confidence 7799999999999999887763 3456688999998888999999999999999876554332 2567789999999999
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeEEEc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1922 GRYIFCGSDDNNVHVWDLLKTTHNGVLS-GHENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1922 G~~LaSGSsDGsIrIWDL~tge~l~tL~-gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
|+-+++|+.|.+|+||.+..+.-...+. ..-..|.++.|+.|.+++++|++|+.|++|.....
T Consensus 284 G~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~As 347 (433)
T KOG0268|consen 284 GQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKAS 347 (433)
T ss_pred cchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchh
Confidence 9999999999999999997765443331 12356999999999999999999999999998754
No 71
>KOG0772|consensus
Probab=99.91 E-value=2.2e-23 Score=247.70 Aligned_cols=300 Identities=18% Similarity=0.221 Sum_probs=238.9
Q ss_pred cccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCce----EEEe-eCCCCceEEEEEecCCCEEEEeecC
Q psy8748 1681 KLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNK----TQVI-PLRSAWVMSVAFAQSGNFVACGGMD 1755 (2004)
Q Consensus 1681 k~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~----l~ti-~~Ht~~ItsLafSPdg~~LaSGS~D 1755 (2004)
+...-..|++|+..|.++++.|.|-.+++||.|.+|++||+..... .+.+ ......|.++.|++.|..|++.+..
T Consensus 156 P~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~ 235 (641)
T KOG0772|consen 156 PGSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGS 235 (641)
T ss_pred CccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecC
Confidence 4445567899999999999999999999999999999999864321 1222 2345579999999999999999888
Q ss_pred CeEEEEEcCCCCCCC------cceEEEEEecCccceeeeEEeCCC--cEEEeecCCeEEEEECCCCceeEEee-----cc
Q psy8748 1756 NMCTVYDLNNRDSTG------AAKVIRELLGYEGFLSSCRFIDDT--TLLTGSGDMKIVTWNLETGQRIHEVA-----QA 1822 (2004)
Q Consensus 1756 GtIrVWDl~t~~~~~------~~k~i~sl~gh~~~Vssvafsdd~--~LlSgS~DGtI~IWDl~tg~~i~~il-----~~ 1822 (2004)
...+++|-+...... -........||...++|.+|++.+ .|++++.||++++||++..+....++ .+
T Consensus 236 aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g 315 (641)
T KOG0772|consen 236 AQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGG 315 (641)
T ss_pred cceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCC
Confidence 999999976532111 111233456788899999999654 59999999999999998755333332 23
Q ss_pred ccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeE---EEEEecCCC--CeEEEEEeCCCCEEEEEECCCeEEEEEccC
Q psy8748 1823 HIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKC---VQTFFGHEA--DVNSVCFHPSGLAFATGSEDKTARLFDIRA 1897 (2004)
Q Consensus 1823 h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~---I~tl~~h~s--~ItsIafSPdg~~LaSgS~DGtIrIWDLrt 1897 (2004)
..-.++.++|+++|++|++|+.||.|.+|+...... ...-.+|.. .|+||.|+++|++|++-+.|+++++||++.
T Consensus 316 ~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq 395 (641)
T KOG0772|consen 316 KRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQ 395 (641)
T ss_pred cccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccc
Confidence 445689999999999999999999999999764322 233346766 899999999999999999999999999997
Q ss_pred Cce-eEEEcCCCCCCCeEEEEEcCCCCEEEEEeC------CCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEE
Q psy8748 1898 DQQ-IATYLPPNKNSGFTSCAVSSSGRYIFCGSD------DNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTS 1970 (2004)
Q Consensus 1898 gk~-i~t~~~~~~~s~ItsLafSPdG~~LaSGSs------DGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSg 1970 (2004)
.+. +..+..-.....-+.++|||+.++|++|+. .|.+.+||..+...+..+.-....|..+.|+|.-+.|+.|
T Consensus 396 ~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~g 475 (641)
T KOG0772|consen 396 FKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAG 475 (641)
T ss_pred cccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeee
Confidence 654 333333333455678999999999999864 5789999999999999988778899999999999999999
Q ss_pred ECCCeEEEEE
Q psy8748 1971 SWDQFVKVWQ 1980 (2004)
Q Consensus 1971 S~DGtIrIWd 1980 (2004)
+.||.+++|=
T Consensus 476 sgdG~~~vyY 485 (641)
T KOG0772|consen 476 SGDGTAHVYY 485 (641)
T ss_pred cCCCceEEEE
Confidence 9999999973
No 72
>KOG1446|consensus
Probab=99.91 E-value=5e-22 Score=227.79 Aligned_cols=292 Identities=22% Similarity=0.356 Sum_probs=247.9
Q ss_pred ccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeec--CCeEE
Q psy8748 1682 LMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGM--DNMCT 1759 (2004)
Q Consensus 1682 ~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~--DGtIr 1759 (2004)
+++.+.+..-.+.|+++.|+++|.++++++.|.++++||..+|+..+++..+...|..++|....+.++.++. |.+|+
T Consensus 4 ~~~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIr 83 (311)
T KOG1446|consen 4 FRPAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIR 83 (311)
T ss_pred cccccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceE
Confidence 4566677778899999999999999999999999999999999999999999889999999888888877776 88999
Q ss_pred EEEcCCCCCCCcceEEEEEecCccceeeeEEeC-CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCE
Q psy8748 1760 VYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID-DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQY 1838 (2004)
Q Consensus 1760 VWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd-d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~ 1838 (2004)
..++.+. +.++-+.||...|..+..++ ++.+++++.|++|++||++..++...+. ...-..++|+|+|-+
T Consensus 84 yLsl~dN------kylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~---~~~~pi~AfDp~GLi 154 (311)
T KOG1446|consen 84 YLSLHDN------KYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLN---LSGRPIAAFDPEGLI 154 (311)
T ss_pred EEEeecC------ceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEe---cCCCcceeECCCCcE
Confidence 9999754 78899999999999999985 4679999999999999999877764442 223346789999999
Q ss_pred EEEEECCCeEEEEECCCC--eEEEEEe---cCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCe
Q psy8748 1839 FVTGSVDKSCKLWDFREK--KCVQTFF---GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGF 1913 (2004)
Q Consensus 1839 LaSGS~DGsIrIWDlrs~--k~I~tl~---~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~I 1913 (2004)
+|++...+.|++||++.- .+..++. +.....+.+.|+|||++++.++..+.+++.|.-+|....++........+
T Consensus 155 fA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~ 234 (311)
T KOG1446|consen 155 FALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNL 234 (311)
T ss_pred EEEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCc
Confidence 999998889999999853 3344443 34677899999999999999999999999999999988888655443322
Q ss_pred -EEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEcc-CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1914 -TSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSG-HENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1914 -tsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~g-Hs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
...+|+||++++++|+.||+|++|+++++..+..+.+ +.+++.++.|+|.-.++++++ ..+-+|-.+..
T Consensus 235 ~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~--s~l~fw~p~~~ 305 (311)
T KOG1446|consen 235 PLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSAS--SNLVFWLPDED 305 (311)
T ss_pred ceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecC--ceEEEEecccc
Confidence 5778999999999999999999999999999999988 799999999999877776665 67888876643
No 73
>KOG0274|consensus
Probab=99.91 E-value=8.9e-23 Score=259.17 Aligned_cols=281 Identities=25% Similarity=0.393 Sum_probs=246.9
Q ss_pred cccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE-eeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCC
Q psy8748 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQV-IPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDST 1769 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~t-i~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~ 1769 (2004)
|...|.+..|. +.++++++.|++|.+||..++..+.. +.+|.+.|.++++...++.+++|+.|.++++||..++
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg--- 281 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTG--- 281 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCC---
Confidence 67788899988 66899999999999999999999888 9999999999999888899999999999999998754
Q ss_pred CcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEE
Q psy8748 1770 GAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCK 1849 (2004)
Q Consensus 1770 ~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIr 1849 (2004)
.+...+.+|...+.++... +..+++|+.|.+|++|++.++..+... .+|.+.|.++..+ +.++++|+.||+|+
T Consensus 282 ---~C~~~l~gh~stv~~~~~~-~~~~~sgs~D~tVkVW~v~n~~~l~l~-~~h~~~V~~v~~~--~~~lvsgs~d~~v~ 354 (537)
T KOG0274|consen 282 ---ECTHSLQGHTSSVRCLTID-PFLLVSGSRDNTVKVWDVTNGACLNLL-RGHTGPVNCVQLD--EPLLVSGSYDGTVK 354 (537)
T ss_pred ---cEEEEecCCCceEEEEEcc-CceEeeccCCceEEEEeccCcceEEEe-ccccccEEEEEec--CCEEEEEecCceEE
Confidence 6778888999998887653 446777899999999999999988544 5699999999998 88999999999999
Q ss_pred EEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCC-ceeEEEcCCCCCCCeEEEEEcCCCCEEEEE
Q psy8748 1850 LWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRAD-QQIATYLPPNKNSGFTSCAVSSSGRYIFCG 1928 (2004)
Q Consensus 1850 IWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtg-k~i~t~~~~~~~s~ItsLafSPdG~~LaSG 1928 (2004)
+||..+++++.++.+|...|.++.+.+. +++++|+.|++|++||+++. +++..+. +|..-+.. ....+++|+++
T Consensus 355 VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~--~h~~~v~~--l~~~~~~Lvs~ 429 (537)
T KOG0274|consen 355 VWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQ--GHTSLVSS--LLLRDNFLVSS 429 (537)
T ss_pred EEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhc--CCcccccc--cccccceeEec
Confidence 9999999999999999999999988765 79999999999999999999 7887773 44344433 34468899999
Q ss_pred eCCCeEEEEECCCCeeeEEEcc-CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy8748 1929 SDDNNVHVWDLLKTTHNGVLSG-HENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVL 1990 (2004)
Q Consensus 1929 SsDGsIrIWDL~tge~l~tL~g-Hs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~I 1990 (2004)
+.||+|++||..+++++..+.+ |.+.|+.+++. ...+++++.||.+++||+.++...+.+
T Consensus 430 ~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~~~~l 490 (537)
T KOG0274|consen 430 SADGTIKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTLIRTL 490 (537)
T ss_pred cccccEEEeecccCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCchhhhh
Confidence 9999999999999999999998 67889998886 567999999999999999998765543
No 74
>KOG0278|consensus
Probab=99.91 E-value=8.2e-24 Score=234.01 Aligned_cols=250 Identities=23% Similarity=0.432 Sum_probs=220.6
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcC
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLN 1764 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~ 1764 (2004)
+.++.||.+.|++.+.+.+...-|+++.|-+-+|||.-+|..++.+. |..-|.+++|+.|.++|++|+.+..++|||++
T Consensus 52 igtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln 130 (334)
T KOG0278|consen 52 IGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLN 130 (334)
T ss_pred EEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhcc
Confidence 45688999999999999999999999999999999999999998886 77789999999999999999999999999998
Q ss_pred CCCCCCcceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEE
Q psy8748 1765 NRDSTGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGS 1843 (2004)
Q Consensus 1765 t~~~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS 1843 (2004)
..+ .....+.+|.+.|..+.|. .+..+++++.|++|++||.+++..+..+. ....|+++.++++|+++.++
T Consensus 131 ~p~-----App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~--~~s~VtSlEvs~dG~ilTia- 202 (334)
T KOG0278|consen 131 RPK-----APPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLE--FNSPVTSLEVSQDGRILTIA- 202 (334)
T ss_pred CCC-----CCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEe--cCCCCcceeeccCCCEEEEe-
Confidence 754 4456778899999999887 56678888999999999999999987774 45679999999999877665
Q ss_pred CCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCC
Q psy8748 1844 VDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGR 1923 (2004)
Q Consensus 1844 ~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~ 1923 (2004)
..+.|.+||..+...++.+. ....|.+...+|+...+++|+.|+.++.||..++..+..+ ..+|.++|.|+.|+|+|.
T Consensus 203 ~gssV~Fwdaksf~~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~-nkgh~gpVhcVrFSPdGE 280 (334)
T KOG0278|consen 203 YGSSVKFWDAKSFGLLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSY-NKGHFGPVHCVRFSPDGE 280 (334)
T ss_pred cCceeEEeccccccceeecc-CccccccccccCCCceEEecCcceEEEEEeccCCceeeec-ccCCCCceEEEEECCCCc
Confidence 46789999999988887774 4567999999999999999999999999999999998886 357779999999999999
Q ss_pred EEEEEeCCCeEEEEECCCCeee
Q psy8748 1924 YIFCGSDDNNVHVWDLLKTTHN 1945 (2004)
Q Consensus 1924 ~LaSGSsDGsIrIWDL~tge~l 1945 (2004)
..++|+.||+|++|.+..++..
T Consensus 281 ~yAsGSEDGTirlWQt~~~~~~ 302 (334)
T KOG0278|consen 281 LYASGSEDGTIRLWQTTPGKTY 302 (334)
T ss_pred eeeccCCCceEEEEEecCCCch
Confidence 9999999999999998665543
No 75
>KOG0274|consensus
Probab=99.91 E-value=1.8e-22 Score=256.31 Aligned_cols=249 Identities=28% Similarity=0.468 Sum_probs=220.7
Q ss_pred ccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCC
Q psy8748 1688 LKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRD 1767 (2004)
Q Consensus 1688 L~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~ 1767 (2004)
+.||.+.|++++|..-+.++++|+.|.+++|||..+|++...+.+|.+.|.++... +..+++|+.|.+|++|+++++
T Consensus 245 l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~--~~~~~sgs~D~tVkVW~v~n~- 321 (537)
T KOG0274|consen 245 LVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTID--PFLLVSGSRDNTVKVWDVTNG- 321 (537)
T ss_pred ccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEcc--CceEeeccCCceEEEEeccCc-
Confidence 67899999999998878899999999999999999999999999999999988875 678888999999999999854
Q ss_pred CCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCe
Q psy8748 1768 STGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKS 1847 (2004)
Q Consensus 1768 ~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGs 1847 (2004)
..+..+.+|.+.|.++... ++.+++|+.||.|++||+.+++++.. +.+|.+.|.++.+... ..+++|+.|+.
T Consensus 322 -----~~l~l~~~h~~~V~~v~~~-~~~lvsgs~d~~v~VW~~~~~~cl~s-l~gH~~~V~sl~~~~~-~~~~Sgs~D~~ 393 (537)
T KOG0274|consen 322 -----ACLNLLRGHTGPVNCVQLD-EPLLVSGSYDGTVKVWDPRTGKCLKS-LSGHTGRVYSLIVDSE-NRLLSGSLDTT 393 (537)
T ss_pred -----ceEEEeccccccEEEEEec-CCEEEEEecCceEEEEEhhhceeeee-ecCCcceEEEEEecCc-ceEEeeeeccc
Confidence 5667777799999999987 88999999999999999999999854 4679999999988765 89999999999
Q ss_pred EEEEECCCC-eEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEE
Q psy8748 1848 CKLWDFREK-KCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIF 1926 (2004)
Q Consensus 1848 IrIWDlrs~-k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~La 1926 (2004)
|++||+++. +++.++.+|..-+.++.+ .++++++++.||+|++||..++++...+... +...+..+++. ...++
T Consensus 394 IkvWdl~~~~~c~~tl~~h~~~v~~l~~--~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~-~~~~v~~l~~~--~~~il 468 (537)
T KOG0274|consen 394 IKVWDLRTKRKCIHTLQGHTSLVSSLLL--RDNFLVSSSADGTIKLWDAEEGECLRTLEGR-HVGGVSALALG--KEEIL 468 (537)
T ss_pred eEeecCCchhhhhhhhcCCccccccccc--ccceeEeccccccEEEeecccCceeeeeccC-CcccEEEeecC--cceEE
Confidence 999999999 999999999998876665 5679999999999999999999999988654 45678887776 46788
Q ss_pred EEeCCCeEEEEECCCCeeeEEEccCC
Q psy8748 1927 CGSDDNNVHVWDLLKTTHNGVLSGHE 1952 (2004)
Q Consensus 1927 SGSsDGsIrIWDL~tge~l~tL~gHs 1952 (2004)
+++.||.+++||+++++....+-.+.
T Consensus 469 ~s~~~~~~~l~dl~~~~~~~~l~~~~ 494 (537)
T KOG0274|consen 469 CSSDDGSVKLWDLRSGTLIRTLLSTD 494 (537)
T ss_pred EEecCCeeEEEecccCchhhhhhhcc
Confidence 99999999999999999888774333
No 76
>KOG1408|consensus
Probab=99.91 E-value=1.4e-22 Score=245.87 Aligned_cols=273 Identities=18% Similarity=0.281 Sum_probs=227.6
Q ss_pred EEEEEeCCCeEEEEECCCCceEEEee-------------------------------------CCCCceEEEEEecCCCE
Q psy8748 1706 HCVSGSLDGKLIIWDTWTGNKTQVIP-------------------------------------LRSAWVMSVAFAQSGNF 1748 (2004)
Q Consensus 1706 ~LASGS~DGtIrVWDl~Tgk~l~ti~-------------------------------------~Ht~~ItsLafSPdg~~ 1748 (2004)
.++|++.||+|++||+..+..-..+. .....+++++.+|+|++
T Consensus 394 cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqh 473 (1080)
T KOG1408|consen 394 CFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQH 473 (1080)
T ss_pred ceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcce
Confidence 48999999999999987532111100 11235899999999999
Q ss_pred EEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC----CCcEEEeecCCeEEEEECCCCceeEEeecccc
Q psy8748 1749 VACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID----DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHI 1824 (2004)
Q Consensus 1749 LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd----d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~ 1824 (2004)
|++|..-|.++||++... ........|...|.|+.|+. ...+++++.|..|.+||....-.+...+.+|.
T Consensus 474 LAsGDr~GnlrVy~Lq~l------~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HS 547 (1080)
T KOG1408|consen 474 LASGDRGGNLRVYDLQEL------EYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHS 547 (1080)
T ss_pred ecccCccCceEEEEehhh------hhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccc
Confidence 999999999999999753 44556778999999999984 34588999999999999998877777789999
Q ss_pred CCeEEEEECCCC--CEEEEEECCCeEEEEECCCCeEEEEEec-----CCCCeEEEEEeCCCCEEEEEECCCeEEEEEccC
Q psy8748 1825 GDVVSISLSPDG--QYFVTGSVDKSCKLWDFREKKCVQTFFG-----HEADVNSVCFHPSGLAFATGSEDKTARLFDIRA 1897 (2004)
Q Consensus 1825 ~~ItsLafSPdg--~~LaSGS~DGsIrIWDlrs~k~I~tl~~-----h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrt 1897 (2004)
..|+++.|.-.| ..+++++.|..|.+--.+.......+.. ....+..++..|+.+++++++.|..|+|||+.+
T Consensus 548 ssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~s 627 (1080)
T KOG1408|consen 548 SSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIES 627 (1080)
T ss_pred cceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccc
Confidence 999999998876 6788999998876543332111122222 235688999999999999999999999999999
Q ss_pred CceeEEEcCC-CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeE
Q psy8748 1898 DQQIATYLPP-NKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFV 1976 (2004)
Q Consensus 1898 gk~i~t~~~~-~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtI 1976 (2004)
++....|... .+.+....+..+|.|.|+++.+.|.++.++|..+|+++....||...|+++.|.+|.+.|++.+.||.|
T Consensus 628 gKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCI 707 (1080)
T KOG1408|consen 628 GKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCI 707 (1080)
T ss_pred cceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceE
Confidence 9999999654 344778899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCC
Q psy8748 1977 KVWQESNT 1984 (2004)
Q Consensus 1977 rIWdlstg 1984 (2004)
.||.+...
T Consensus 708 FvW~lp~~ 715 (1080)
T KOG1408|consen 708 FVWKLPLT 715 (1080)
T ss_pred EEEECchh
Confidence 99998753
No 77
>KOG0640|consensus
Probab=99.91 E-value=2.7e-23 Score=234.90 Aligned_cols=307 Identities=20% Similarity=0.309 Sum_probs=243.2
Q ss_pred CCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCC
Q psy8748 1552 EPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTS 1631 (2004)
Q Consensus 1552 e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdg 1631 (2004)
..||+++++-+|||||.++|| |+.|-.|+|.|+.. +|. +. .+
T Consensus 109 t~HK~~cR~aafs~DG~lvAT-GsaD~SIKildver--mla---------------ks--------~~------------ 150 (430)
T KOG0640|consen 109 TSHKSPCRAAAFSPDGSLVAT-GSADASIKILDVER--MLA---------------KS--------KP------------ 150 (430)
T ss_pred eecccceeeeeeCCCCcEEEc-cCCcceEEEeehhh--hhh---------------hc--------ch------------
Confidence 349999999999999999999 99999999999965 222 00 00
Q ss_pred cchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEe
Q psy8748 1632 SINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGS 1711 (2004)
Q Consensus 1632 Sidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS 1711 (2004)
.+. ........-..+++|-.|.+.|+++.|+|....|++|+
T Consensus 151 ------------------------~em---------------~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS~s 191 (430)
T KOG0640|consen 151 ------------------------KEM---------------ISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILISGS 191 (430)
T ss_pred ------------------------hhh---------------ccCCcccCCceEeehhhccCcccceeecchhheEEecc
Confidence 000 00000011234778999999999999999999999999
Q ss_pred CCCeEEEEECCCCceEEEee--CCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeE
Q psy8748 1712 LDGKLIIWDTWTGNKTQVIP--LRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCR 1789 (2004)
Q Consensus 1712 ~DGtIrVWDl~Tgk~l~ti~--~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssva 1789 (2004)
.|++|++||+......+.++ ....+|.++.|+|.|.++++|.....+++||+++.++ +.....-.+|.+.|+++.
T Consensus 192 rD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qc---fvsanPd~qht~ai~~V~ 268 (430)
T KOG0640|consen 192 RDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQC---FVSANPDDQHTGAITQVR 268 (430)
T ss_pred CCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeE---eeecCcccccccceeEEE
Confidence 99999999987654333332 3456899999999999999999999999999987542 222224456889999999
Q ss_pred EeCC-CcEEEeecCCeEEEEECCCCceeEEeeccccC-CeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCC
Q psy8748 1790 FIDD-TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIG-DVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEA 1867 (2004)
Q Consensus 1790 fsdd-~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~-~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s 1867 (2004)
+++. +..++++.||.|++||--+++++..+...|.+ .|.+..|..+|+++++.+.|..+++|.+.+++++..+.+-..
T Consensus 269 Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~ 348 (430)
T KOG0640|consen 269 YSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGT 348 (430)
T ss_pred ecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCc
Confidence 9965 45788999999999999999999888777765 588899999999999999999999999999999998875421
Q ss_pred -----CeEEEEEeCCCCEEEEEEC-CCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1868 -----DVNSVCFHPSGLAFATGSE-DKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1868 -----~ItsIafSPdg~~LaSgS~-DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
--+...|+....+++.-.+ .+.+.-||.++......+ ..+|++.+.++.-+|.+.-+++|+.|..+++|--
T Consensus 349 tgrq~~rtqAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~-slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyr 425 (430)
T KOG0640|consen 349 TGRQKHRTQAVFNHTEDYVLFPDEASNSLCSWDARTADRVALL-SLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYR 425 (430)
T ss_pred ccchhhhhhhhhcCccceEEccccccCceeeccccchhhhhhc-ccCCCCCceEEEeCCCCCceeeecccceeeeeee
Confidence 1233456766777665543 567999999988776555 3578899999999999999999999999999964
No 78
>KOG0973|consensus
Probab=99.91 E-value=1.3e-22 Score=259.77 Aligned_cols=294 Identities=19% Similarity=0.292 Sum_probs=245.1
Q ss_pred ccccceeEEEEeCCCCEEEEEe--CCCeEEEEECCC------------CceEEEeeCCCCceEEEEEecCCCEEEEeecC
Q psy8748 1690 GHINKVNSVHYSGDSRHCVSGS--LDGKLIIWDTWT------------GNKTQVIPLRSAWVMSVAFAQSGNFVACGGMD 1755 (2004)
Q Consensus 1690 GHt~~VtsLaFSPDG~~LASGS--~DGtIrVWDl~T------------gk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~D 1755 (2004)
.+...|.+++.+|||..++||| .||.++||+... .+.+.....|.+.|.|+.|++||.+|++|+.|
T Consensus 11 H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD 90 (942)
T KOG0973|consen 11 HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDD 90 (942)
T ss_pred cCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCc
Confidence 3456799999999999999999 899999997542 23345567899999999999999999999999
Q ss_pred CeEEEEEcCCC------------CCCCcceEEEEEecCccceeeeEEeCC-CcEEEeecCCeEEEEECCCCceeEEeecc
Q psy8748 1756 NMCTVYDLNNR------------DSTGAAKVIRELLGYEGFLSSCRFIDD-TTLLTGSGDMKIVTWNLETGQRIHEVAQA 1822 (2004)
Q Consensus 1756 GtIrVWDl~t~------------~~~~~~k~i~sl~gh~~~Vssvafsdd-~~LlSgS~DGtI~IWDl~tg~~i~~il~~ 1822 (2004)
+.|.+|+.... ......+....+.+|...|..+.|+++ .++++++.|+.|.+||..+.+.+ +.+.+
T Consensus 91 ~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~-~vl~~ 169 (942)
T KOG0973|consen 91 RLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELL-KVLRG 169 (942)
T ss_pred ceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceee-eeeec
Confidence 99999998731 112345678889999999999999965 46889999999999999999555 67789
Q ss_pred ccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCC------CCeEEEEEeCCCCEEEEEEC----CCeEEE
Q psy8748 1823 HIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHE------ADVNSVCFHPSGLAFATGSE----DKTARL 1892 (2004)
Q Consensus 1823 h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~------s~ItsIafSPdg~~LaSgS~----DGtIrI 1892 (2004)
|.+.|..+.|+|-|++|++-+.|++|+||++.+....+.+.++- ..+..+.|+|||.+|++... -..+.|
T Consensus 170 H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~I 249 (942)
T KOG0973|consen 170 HQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAI 249 (942)
T ss_pred ccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEE
Confidence 99999999999999999999999999999988877777775543 35788999999999998643 336888
Q ss_pred EEccCCceeEEEcCCCCCCCeEEEEEcCC-----CC------------EEEEEeCCCeEEEEECCCCeeeEEEc-cCCCC
Q psy8748 1893 FDIRADQQIATYLPPNKNSGFTSCAVSSS-----GR------------YIFCGSDDNNVHVWDLLKTTHNGVLS-GHENR 1954 (2004)
Q Consensus 1893 WDLrtgk~i~t~~~~~~~s~ItsLafSPd-----G~------------~LaSGSsDGsIrIWDL~tge~l~tL~-gHs~~ 1954 (2004)
.+-.+.+.-..+ -+|..++.+++|+|. .+ .+|+|+.|++|-||.....+++.... -....
T Consensus 250 ieR~tWk~~~~L--vGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~S 327 (942)
T KOG0973|consen 250 IERGTWKVDKDL--VGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKS 327 (942)
T ss_pred EecCCceeeeee--ecCCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCc
Confidence 888777766666 466679999999982 11 67899999999999998777776553 24678
Q ss_pred eEEEEEcCCCCEEEEEECCCeEEEEECCCCeE
Q psy8748 1955 VTSISLSPNGMALVTSSWDQFVKVWQESNTIV 1986 (2004)
Q Consensus 1955 VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l 1986 (2004)
|.+++|+|||..|+.|+.||+|.++.++..+.
T Consensus 328 I~DmsWspdG~~LfacS~DGtV~~i~Fee~El 359 (942)
T KOG0973|consen 328 IVDMSWSPDGFSLFACSLDGTVALIHFEEKEL 359 (942)
T ss_pred eeeeeEcCCCCeEEEEecCCeEEEEEcchHHh
Confidence 99999999999999999999999999987543
No 79
>PTZ00421 coronin; Provisional
Probab=99.91 E-value=7.7e-22 Score=249.95 Aligned_cols=299 Identities=14% Similarity=0.188 Sum_probs=228.1
Q ss_pred cccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceE-------------EEeeCCCCceEEEEEec-CCCEEEEeecCC
Q psy8748 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKT-------------QVIPLRSAWVMSVAFAQ-SGNFVACGGMDN 1756 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l-------------~ti~~Ht~~ItsLafSP-dg~~LaSGS~DG 1756 (2004)
|-..|+....++|+..+++++.+.....|+...+..+ ..+.+|.+.|.+++|+| ++++|++|+.||
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg 98 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG 98 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC
Confidence 4556677777778777777777777777775443222 13678999999999999 889999999999
Q ss_pred eEEEEEcCCCCCC-CcceEEEEEecCccceeeeEEeCC--CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEEC
Q psy8748 1757 MCTVYDLNNRDST-GAAKVIRELLGYEGFLSSCRFIDD--TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLS 1833 (2004)
Q Consensus 1757 tIrVWDl~t~~~~-~~~k~i~sl~gh~~~Vssvafsdd--~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafS 1833 (2004)
.|++|++...... ........+.+|...|.++.|++. +.+++++.|+.|++||+.+++... .+.+|...|.+++|+
T Consensus 99 tIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~-~l~~h~~~V~sla~s 177 (493)
T PTZ00421 99 TIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVE-VIKCHSDQITSLEWN 177 (493)
T ss_pred EEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEE-EEcCCCCceEEEEEE
Confidence 9999999764311 122346678899999999999964 479999999999999999987764 446788999999999
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCC-eEEEEEeCCCCEEEEEE----CCCeEEEEEccCCceeEEEcCCC
Q psy8748 1834 PDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEAD-VNSVCFHPSGLAFATGS----EDKTARLFDIRADQQIATYLPPN 1908 (2004)
Q Consensus 1834 Pdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~-ItsIafSPdg~~LaSgS----~DGtIrIWDLrtgk~i~t~~~~~ 1908 (2004)
|+|++|++++.||.|++||+++++.+..+.+|.+. +..+.|.+++..+++++ .|+.|++||+++...........
T Consensus 178 pdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d 257 (493)
T PTZ00421 178 LDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLD 257 (493)
T ss_pred CCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccC
Confidence 99999999999999999999999999888888765 45678999888877654 47899999998765443332223
Q ss_pred CCCCeEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeeeEEEcc-CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeE
Q psy8748 1909 KNSGFTSCAVSSSGRYIFCGS-DDNNVHVWDLLKTTHNGVLSG-HENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIV 1986 (2004)
Q Consensus 1909 ~~s~ItsLafSPdG~~LaSGS-sDGsIrIWDL~tge~l~tL~g-Hs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l 1986 (2004)
....+....|+++++++++|+ .||.|++||+.+++....... +..++.+++|.|....=+ ..--..|+|.+....
T Consensus 258 ~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk~~~dv--~~~Ei~r~~~l~~~~- 334 (493)
T PTZ00421 258 QSSALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPKWSLDT--RKCEIARFYALTYHS- 334 (493)
T ss_pred CCCceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEecccccccc--cceeeeEEEEecCCe-
Confidence 334566778999999999887 599999999999988776543 456788999988532211 112245777776543
Q ss_pred EEEEEee
Q psy8748 1987 WKVLKVY 1993 (2004)
Q Consensus 1987 ~k~Ik~~ 1993 (2004)
++.+...
T Consensus 335 i~pis~~ 341 (493)
T PTZ00421 335 LYTIQML 341 (493)
T ss_pred EEEEEEE
Confidence 4555543
No 80
>KOG0310|consensus
Probab=99.91 E-value=1.1e-22 Score=242.40 Aligned_cols=280 Identities=24% Similarity=0.351 Sum_probs=239.6
Q ss_pred cccceeEEEEeCCCCE-EEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCC
Q psy8748 1691 HINKVNSVHYSGDSRH-CVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDST 1769 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~-LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~ 1769 (2004)
-.+.|.+++|+|...+ +|+.+ .-.+.+|+..+......+......|++++|..||+++++|+..|.|++||+.+
T Consensus 25 e~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~---- 99 (487)
T KOG0310|consen 25 EHNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKS---- 99 (487)
T ss_pred ccCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEecccc----
Confidence 3478999999996553 44443 35799999888888887888888899999999999999999999999999653
Q ss_pred CcceEEEEEecCccceeeeEEeC--CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCC-CCEEEEEECCC
Q psy8748 1770 GAAKVIRELLGYEGFLSSCRFID--DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPD-GQYFVTGSVDK 1846 (2004)
Q Consensus 1770 ~~~k~i~sl~gh~~~Vssvafsd--d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPd-g~~LaSGS~DG 1846 (2004)
....+.+.+|..++....|++ +..+++|++|+.+++||+.+... .....+|.+.|.|.+|+|. +..+++|+.||
T Consensus 100 --r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v-~~~l~~htDYVR~g~~~~~~~hivvtGsYDg 176 (487)
T KOG0310|consen 100 --RVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYV-QAELSGHTDYVRCGDISPANDHIVVTGSYDG 176 (487)
T ss_pred --HHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEE-EEEecCCcceeEeeccccCCCeEEEecCCCc
Confidence 346677889999999999984 45688899999999999999885 4567899999999999995 55899999999
Q ss_pred eEEEEECCCC-eEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEE
Q psy8748 1847 SCKLWDFREK-KCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYI 1925 (2004)
Q Consensus 1847 sIrIWDlrs~-k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~L 1925 (2004)
.|++||.+.. ..+..+ .|..+|..+.+-|.|..+++++ ...|++||+.+|....... ..|...|+|+++..++..|
T Consensus 177 ~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAg-Gn~vkVWDl~~G~qll~~~-~~H~KtVTcL~l~s~~~rL 253 (487)
T KOG0310|consen 177 KVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAG-GNSVKVWDLTTGGQLLTSM-FNHNKTVTCLRLASDSTRL 253 (487)
T ss_pred eEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcC-CCeEEEEEecCCceehhhh-hcccceEEEEEeecCCceE
Confidence 9999999987 555555 7999999999999999999987 5689999999776654443 2377899999999999999
Q ss_pred EEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1926 FCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1926 aSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
++|+-||.|++||+.+.+.+..+. -.++|.+++.+|+++.++.|..||.+.+=+..
T Consensus 254 lS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~rr~~ 309 (487)
T KOG0310|consen 254 LSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRRE 309 (487)
T ss_pred eecccccceEEEEccceEEEEeee-cccceeeEEecCCCceEEEecccceeeeehhh
Confidence 999999999999999999988886 57899999999999999999999998877443
No 81
>KOG1408|consensus
Probab=99.91 E-value=1.9e-22 Score=244.83 Aligned_cols=303 Identities=17% Similarity=0.257 Sum_probs=230.4
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeC-C-----------------------CCceEEEEEecCCCE
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPL-R-----------------------SAWVMSVAFAQSGNF 1748 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~-H-----------------------t~~ItsLafSPdg~~ 1748 (2004)
..-+||+.+ .+++++|+.+|.|++|+..+-....+++. | -....++.|++....
T Consensus 261 TnAnCIcVs--~r~I~cgCa~g~vrlFnp~tL~y~~Tlpr~halg~d~a~~~q~~~~~s~~~~a~fPD~IA~~Fdet~~k 338 (1080)
T KOG1408|consen 261 TNANCICVS--SRLIACGCAKGMVRLFNPETLDYAGTLPRSHALGSDTANLSQPEPKNSESSPAIFPDAIACQFDETTDK 338 (1080)
T ss_pred cccceeeee--cceEEEeeccceeeecCcchhhhccccccccccccchhhcccccccccccCcccCCceeEEEecCCCce
Confidence 344567765 67999999999999998776544433321 0 012346789999999
Q ss_pred EEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe------------CCCcEEEeecCCeEEEEECCCCc--
Q psy8748 1749 VACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI------------DDTTLLTGSGDMKIVTWNLETGQ-- 1814 (2004)
Q Consensus 1749 LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs------------dd~~LlSgS~DGtI~IWDl~tg~-- 1814 (2004)
+.+...|..++|||++... ..........|...|+.+.-. +.+.|++++.||+|++||+..+.
T Consensus 339 lscVYndhSlYvWDvrD~~---kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn 415 (1080)
T KOG1408|consen 339 LSCVYNDHSLYVWDVRDVN---KVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNN 415 (1080)
T ss_pred EEEEEcCceEEEEeccccc---cccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeeccccccc
Confidence 9999999999999998654 222334445566666655433 34569999999999999987521
Q ss_pred -eeEE---------e------------------------eccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEE
Q psy8748 1815 -RIHE---------V------------------------AQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQ 1860 (2004)
Q Consensus 1815 -~i~~---------i------------------------l~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~ 1860 (2004)
..++ + ..+....+.+++++|+|++|++|...|++++||+...+...
T Consensus 416 ~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~ 495 (1080)
T KOG1408|consen 416 QVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTC 495 (1080)
T ss_pred ceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhh
Confidence 1000 0 01223468999999999999999999999999999988888
Q ss_pred EEecCCCCeEEEEEeC---CCCEEEEEECCCeEEEEEccCCcee-E------------EE--------------------
Q psy8748 1861 TFFGHEADVNSVCFHP---SGLAFATGSEDKTARLFDIRADQQI-A------------TY-------------------- 1904 (2004)
Q Consensus 1861 tl~~h~s~ItsIafSP---dg~~LaSgS~DGtIrIWDLrtgk~i-~------------t~-------------------- 1904 (2004)
.+.+|+..|.|+.|+. ..++|++++.|.-|+|||....-.+ . +|
T Consensus 496 ~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimF 575 (1080)
T KOG1408|consen 496 FMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMF 575 (1080)
T ss_pred heecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhhe
Confidence 8999999999999986 3467999999999999997421110 0 00
Q ss_pred ------------cCC---CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEcc---CCCCeEEEEEcCCCCE
Q psy8748 1905 ------------LPP---NKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSG---HENRVTSISLSPNGMA 1966 (2004)
Q Consensus 1905 ------------~~~---~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~g---Hs~~VtsLaFSPDg~~ 1966 (2004)
... -....+..++..|..+++++++.|..|+|||+.+|+..+.+++ |.+....+...|.|.|
T Consensus 576 r~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY 655 (1080)
T KOG1408|consen 576 RVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIY 655 (1080)
T ss_pred ehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccE
Confidence 000 0123466788999999999999999999999999999999975 7788999999999999
Q ss_pred EEEEECCCeEEEEECCCCeEEEEEEeecCCCCccccc
Q psy8748 1967 LVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003 (2004)
Q Consensus 1967 LaSgS~DGtIrIWdlstg~l~k~Ik~~~~h~~~VtsV 2003 (2004)
+++...|.++.++|+.+|++ +..+.+|...|+.+
T Consensus 656 ~atScsdktl~~~Df~sgEc---vA~m~GHsE~VTG~ 689 (1080)
T KOG1408|consen 656 LATSCSDKTLCFVDFVSGEC---VAQMTGHSEAVTGV 689 (1080)
T ss_pred EEEeecCCceEEEEeccchh---hhhhcCcchheeee
Confidence 99999999999999999854 55666788777754
No 82
>KOG0300|consensus
Probab=99.90 E-value=9.6e-23 Score=230.36 Aligned_cols=300 Identities=25% Similarity=0.408 Sum_probs=253.1
Q ss_pred ccccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEE
Q psy8748 1680 VKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCT 1759 (2004)
Q Consensus 1680 lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIr 1759 (2004)
..+...+.+.||.++|+.++.......+.+++.|.+-+||.+++|+++..+.+|.+.|+++.|++.+.++++++.|++-.
T Consensus 136 ~~~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taH 215 (481)
T KOG0300|consen 136 VKFRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAH 215 (481)
T ss_pred eeEeehhhhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchH
Confidence 46677889999999999999988777899999999999999999999999999999999999999999999999999999
Q ss_pred EEEc------CCCCC------------------------C----CcceEEEEEecCccceeeeEEe-CCCcEEEeecCCe
Q psy8748 1760 VYDL------NNRDS------------------------T----GAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMK 1804 (2004)
Q Consensus 1760 VWDl------~t~~~------------------------~----~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGt 1804 (2004)
||.. ..... . .....+..+.+|...+.++.|. .+..+++++.|.+
T Consensus 216 IW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRT 295 (481)
T KOG0300|consen 216 IWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRT 295 (481)
T ss_pred HHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeecccc
Confidence 9972 11000 0 0112345677899999999997 5567999999999
Q ss_pred EEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC-eEEEEEecCCCCeEEEEEeCCCCEEEE
Q psy8748 1805 IVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREK-KCVQTFFGHEADVNSVCFHPSGLAFAT 1883 (2004)
Q Consensus 1805 I~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~-k~I~tl~~h~s~ItsIafSPdg~~LaS 1883 (2004)
-.+||+++|..+ ..+.+|....+.++-+|..+++++++.|.+.++||++.. ..+..|.+|...|+++.|..+. .+++
T Consensus 296 AnlwDVEtge~v-~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd-~vVS 373 (481)
T KOG0300|consen 296 ANLWDVETGEVV-NILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDD-RVVS 373 (481)
T ss_pred ceeeeeccCcee-ccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCC-ceee
Confidence 999999999988 566899999999999999999999999999999999854 4577899999999999998765 5889
Q ss_pred EECCCeEEEEEccCCce-eEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee----EEEccCCCCeEEE
Q psy8748 1884 GSEDKTARLFDIRADQQ-IATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHN----GVLSGHENRVTSI 1958 (2004)
Q Consensus 1884 gS~DGtIrIWDLrtgk~-i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l----~tL~gHs~~VtsL 1958 (2004)
|+.|.+|++||+++.+. +.++ ....++..++++..+..|+.-.++..|++||+...... ..-++|..-|+|+
T Consensus 374 gSDDrTvKvWdLrNMRsplATI---RtdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~ 450 (481)
T KOG0300|consen 374 GSDDRTVKVWDLRNMRSPLATI---RTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCC 450 (481)
T ss_pred cCCCceEEEeeeccccCcceee---ecCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeee
Confidence 99999999999987654 3444 23467889999998899999999999999998543322 1235899999999
Q ss_pred EEcCCC--CEEEEEECCCeEEEEECCCC
Q psy8748 1959 SLSPNG--MALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1959 aFSPDg--~~LaSgS~DGtIrIWdlstg 1984 (2004)
+|..+. .-|++||.|..+.-|++...
T Consensus 451 AW~eehp~cnLftcGFDR~v~gW~in~p 478 (481)
T KOG0300|consen 451 AWLEEHPACNLFTCGFDRMVAGWKINTP 478 (481)
T ss_pred eccccCcccccccccccceeeeeEeccc
Confidence 997543 45899999999999998764
No 83
>KOG0288|consensus
Probab=99.90 E-value=3.2e-23 Score=242.36 Aligned_cols=284 Identities=22% Similarity=0.334 Sum_probs=239.9
Q ss_pred CCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCC
Q psy8748 1551 PEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPT 1630 (2004)
Q Consensus 1551 ~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spd 1630 (2004)
..-|.++|+.+.|-++..+||+ |+.|..|++|++.. .+
T Consensus 171 ld~h~gev~~v~~l~~sdtlat-gg~Dr~Ik~W~v~~-------------~k---------------------------- 208 (459)
T KOG0288|consen 171 LDAHEGEVHDVEFLRNSDTLAT-GGSDRIIKLWNVLG-------------EK---------------------------- 208 (459)
T ss_pred hhccccccceeEEccCcchhhh-cchhhhhhhhhccc-------------ch----------------------------
Confidence 3448889999999999999999 99999999999866 00
Q ss_pred CcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEE
Q psy8748 1631 SSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSG 1710 (2004)
Q Consensus 1631 gSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASG 1710 (2004)
...+.+|.|-.++|+++.|.+++++++++
T Consensus 209 ---------------------------------------------------~~~~~tLaGs~g~it~~d~d~~~~~~iAa 237 (459)
T KOG0288|consen 209 ---------------------------------------------------SELISTLAGSLGNITSIDFDSDNKHVIAA 237 (459)
T ss_pred ---------------------------------------------------hhhhhhhhccCCCcceeeecCCCceEEee
Confidence 00234566777899999999999999999
Q ss_pred eCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEE
Q psy8748 1711 SLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRF 1790 (2004)
Q Consensus 1711 S~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvaf 1790 (2004)
+.|+.+++|++.+++...++.+|.+.|+++.|......+++|+.|.+|+.||+.... +.++... ...+..+..
T Consensus 238 s~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~------C~kt~l~-~S~cnDI~~ 310 (459)
T KOG0288|consen 238 SNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAY------CSKTVLP-GSQCNDIVC 310 (459)
T ss_pred cCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhh------eeccccc-cccccceEe
Confidence 999999999999999999999999999999998877779999999999999997643 2222211 112222222
Q ss_pred eCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecC----C
Q psy8748 1791 IDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGH----E 1866 (2004)
Q Consensus 1791 sdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h----~ 1866 (2004)
. ...+++|-.|+.|++||+++......+ ...+.|+++..+++|..+.+++.|.++.++|+++.+....+.+. .
T Consensus 311 ~-~~~~~SgH~DkkvRfwD~Rs~~~~~sv--~~gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~a 387 (459)
T KOG0288|consen 311 S-ISDVISGHFDKKVRFWDIRSADKTRSV--PLGGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCA 387 (459)
T ss_pred c-ceeeeecccccceEEEeccCCceeeEe--ecCcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccc
Confidence 2 446788999999999999999887665 34458999999999999999999999999999999887777543 2
Q ss_pred CCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEE
Q psy8748 1867 ADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVW 1937 (2004)
Q Consensus 1867 s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIW 1937 (2004)
...+.+.|+|++.|+++|+.||.|+||++.++++............|++++|+|.|..+++++.++.+.+|
T Consensus 388 sDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 388 SDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred cccceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 35889999999999999999999999999999999888776666689999999999999999999999999
No 84
>KOG0308|consensus
Probab=99.90 E-value=7.5e-23 Score=248.84 Aligned_cols=298 Identities=17% Similarity=0.328 Sum_probs=236.7
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCC--ceEEEeeCCCCceEEEEE-ecCCCEEEEeecCCeEEEE
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTG--NKTQVIPLRSAWVMSVAF-AQSGNFVACGGMDNMCTVY 1761 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tg--k~l~ti~~Ht~~ItsLaf-SPdg~~LaSGS~DGtIrVW 1761 (2004)
...+..|.+.|++++...+|+.|++++.|-+|++|+...+ -+..++..|.+.|.|+++ .++...+++||-|+.|.+|
T Consensus 66 ~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflW 145 (735)
T KOG0308|consen 66 IASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLW 145 (735)
T ss_pred hhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEE
Confidence 3456679999999999999999999999999999999887 577788899999999999 7788899999999999999
Q ss_pred EcCCCCC--CCcc--eEEEEEe-cCccceeeeEEeCCC-cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCC
Q psy8748 1762 DLNNRDS--TGAA--KVIRELL-GYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPD 1835 (2004)
Q Consensus 1762 Dl~t~~~--~~~~--k~i~sl~-gh~~~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPd 1835 (2004)
|++.+.. .... .....+. |+...+.+++..+.+ .+++|+..+.+++||.++++.+.++ .+|...|.++..++|
T Consensus 146 Din~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkL-rGHTdNVr~ll~~dD 224 (735)
T KOG0308|consen 146 DINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKL-RGHTDNVRVLLVNDD 224 (735)
T ss_pred EccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeee-eccccceEEEEEcCC
Confidence 9997632 1111 1112222 677788888877554 5778889999999999999988666 499999999999999
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEE
Q psy8748 1836 GQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTS 1915 (2004)
Q Consensus 1836 g~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~Its 1915 (2004)
|+.+++++.||+|++||+...+++.++..|...|+++..+|+-.++++|+.||.|..=|+++......+... ..++..
T Consensus 225 Gt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~--daPv~~ 302 (735)
T KOG0308|consen 225 GTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKE--DAPVLK 302 (735)
T ss_pred CCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecC--CCchhh
Confidence 999999999999999999999999999999999999999999999999999999999999985333222212 245666
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCe-------eeEEEc---c--------------CCCCeEEEEEcCCCCEEEEEE
Q psy8748 1916 CAVSSSGRYIFCGSDDNNVHVWDLLKTT-------HNGVLS---G--------------HENRVTSISLSPNGMALVTSS 1971 (2004)
Q Consensus 1916 LafSPdG~~LaSGSsDGsIrIWDL~tge-------~l~tL~---g--------------Hs~~VtsLaFSPDg~~LaSgS 1971 (2004)
+..+.+.+-+-+++.|+.|+-|...-.. +..... . ....|..-+.-.|.++++|-.
T Consensus 303 l~~~~~~~~~WvtTtds~I~rW~~~~~~~l~~s~~~~~~~T~~~~~~~~~~~tp~~vi~Gg~ai~k~~mL~dkRhVlTkD 382 (735)
T KOG0308|consen 303 LHLHEHDNSVWVTTTDSSIKRWKLEPDIALSVSGDLDFFSTDSNNHSCDLTNTPDSVIPGGAAIKKHAMLNDKRHVLTKD 382 (735)
T ss_pred hhhccccCCceeeeccccceecCCccccccccCCCCCcccccCCCccccccCCCceeccCchhhhhhhhhcCcceEeeec
Confidence 7777655555777889999999753211 111000 0 112344445556888999999
Q ss_pred CCCeEEEEECCCCe
Q psy8748 1972 WDQFVKVWQESNTI 1985 (2004)
Q Consensus 1972 ~DGtIrIWdlstg~ 1985 (2004)
.+|.+.+||+-...
T Consensus 383 a~gnv~lwDIl~~~ 396 (735)
T KOG0308|consen 383 AKGNVALWDILACV 396 (735)
T ss_pred CCCCEEEEEeeeee
Confidence 99999999998754
No 85
>KOG0772|consensus
Probab=99.90 E-value=1.9e-22 Score=239.82 Aligned_cols=290 Identities=23% Similarity=0.329 Sum_probs=224.2
Q ss_pred CCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCcc
Q psy8748 1554 CKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSSI 1633 (2004)
Q Consensus 1554 Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgSi 1633 (2004)
|+..|.++++.|.|-+++| |+.|.+|+.||.+. ++...+.++.+
T Consensus 166 gtk~Vsal~~Dp~GaR~~s-Gs~Dy~v~~wDf~g---------Mdas~~~fr~l-------------------------- 209 (641)
T KOG0772|consen 166 GTKIVSALAVDPSGARFVS-GSLDYTVKFWDFQG---------MDASMRSFRQL-------------------------- 209 (641)
T ss_pred CceEEEEeeecCCCceeee-ccccceEEEEeccc---------ccccchhhhcc--------------------------
Confidence 6667999999999999999 99999999999987 11111101000
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEeCC
Q psy8748 1634 NIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLD 1713 (2004)
Q Consensus 1634 di~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~D 1713 (2004)
...-...|+++.|++.|..|++.+..
T Consensus 210 ------------------------------------------------------~P~E~h~i~sl~ys~Tg~~iLvvsg~ 235 (641)
T KOG0772|consen 210 ------------------------------------------------------QPCETHQINSLQYSVTGDQILVVSGS 235 (641)
T ss_pred ------------------------------------------------------CcccccccceeeecCCCCeEEEEecC
Confidence 01133579999999999988888878
Q ss_pred CeEEEEECCCCceEEE-------------eeCCCCceEEEEEecCC-CEEEEeecCCeEEEEEcCCCCCCCcceEEEE--
Q psy8748 1714 GKLIIWDTWTGNKTQV-------------IPLRSAWVMSVAFAQSG-NFVACGGMDNMCTVYDLNNRDSTGAAKVIRE-- 1777 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~t-------------i~~Ht~~ItsLafSPdg-~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~s-- 1777 (2004)
...+|+|- .|..+.. .++|...++|.+|+|+. ..+++++.||++++|++++... ..++++.
T Consensus 236 aqakl~DR-dG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~--q~qVik~k~ 312 (641)
T KOG0772|consen 236 AQAKLLDR-DGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKS--QLQVIKTKP 312 (641)
T ss_pred cceeEEcc-CCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchh--heeEEeecc
Confidence 89999984 4433222 25789999999999965 5889999999999999987542 2222222
Q ss_pred EecCccceeeeEEeCC-CcEEEeecCCeEEEEECCCC--ceeEEeeccccC--CeEEEEECCCCCEEEEEECCCeEEEEE
Q psy8748 1778 LLGYEGFLSSCRFIDD-TTLLTGSGDMKIVTWNLETG--QRIHEVAQAHIG--DVVSISLSPDGQYFVTGSVDKSCKLWD 1852 (2004)
Q Consensus 1778 l~gh~~~Vssvafsdd-~~LlSgS~DGtI~IWDl~tg--~~i~~il~~h~~--~ItsLafSPdg~~LaSGS~DGsIrIWD 1852 (2004)
..+..-.++.|+|+.+ ..+++|+.||.|.+|+.... .....+...|.. .|+|+.|+++|++|++-+.|+++++||
T Consensus 313 ~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWD 392 (641)
T KOG0772|consen 313 AGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWD 392 (641)
T ss_pred CCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeee
Confidence 2344557788999855 55888999999999997543 233445667877 899999999999999999999999999
Q ss_pred CCCCe-EEEEEecC--CCCeEEEEEeCCCCEEEEEEC------CCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCC
Q psy8748 1853 FREKK-CVQTFFGH--EADVNSVCFHPSGLAFATGSE------DKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGR 1923 (2004)
Q Consensus 1853 lrs~k-~I~tl~~h--~s~ItsIafSPdg~~LaSgS~------DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~ 1923 (2004)
+++.+ ++....+. ..+-+.++|+|+.++|++|+. .|++.+||..+...+.++... ...|..+.|+|.-+
T Consensus 393 Lrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~--~aSvv~~~WhpkLN 470 (641)
T KOG0772|consen 393 LRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS--TASVVRCLWHPKLN 470 (641)
T ss_pred ccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCC--CceEEEEeecchhh
Confidence 99754 44444332 345678899999999999874 578999999999998888554 46789999999999
Q ss_pred EEEEEeCCCeEEEEE
Q psy8748 1924 YIFCGSDDNNVHVWD 1938 (2004)
Q Consensus 1924 ~LaSGSsDGsIrIWD 1938 (2004)
.|++|+.||.+++|=
T Consensus 471 Qi~~gsgdG~~~vyY 485 (641)
T KOG0772|consen 471 QIFAGSGDGTAHVYY 485 (641)
T ss_pred heeeecCCCceEEEE
Confidence 999999999999873
No 86
>KOG0643|consensus
Probab=99.90 E-value=8.9e-22 Score=220.20 Aligned_cols=291 Identities=21% Similarity=0.303 Sum_probs=239.1
Q ss_pred CCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCc
Q psy8748 1553 PCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSS 1632 (2004)
Q Consensus 1553 ~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgS 1632 (2004)
+|..++|.+.|+.+|.+|+| ++.|.+..||--.. |+
T Consensus 8 GHERplTqiKyN~eGDLlFs-caKD~~~~vw~s~n-------------Ge------------------------------ 43 (327)
T KOG0643|consen 8 GHERPLTQIKYNREGDLLFS-CAKDSTPTVWYSLN-------------GE------------------------------ 43 (327)
T ss_pred cCccccceEEecCCCcEEEE-ecCCCCceEEEecC-------------Cc------------------------------
Confidence 47778999999999999999 99999999997644 11
Q ss_pred chhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEeC
Q psy8748 1633 INIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSL 1712 (2004)
Q Consensus 1633 idi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~ 1712 (2004)
.+-++.||++.|+|++.+-+.++++||+.
T Consensus 44 ---------------------------------------------------rlGty~GHtGavW~~Did~~s~~liTGSA 72 (327)
T KOG0643|consen 44 ---------------------------------------------------RLGTYDGHTGAVWCCDIDWDSKHLITGSA 72 (327)
T ss_pred ---------------------------------------------------eeeeecCCCceEEEEEecCCcceeeeccc
Confidence 23457789999999999999999999999
Q ss_pred CCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeec-----CCeEEEEEcCCCCCC-CcceEEEEEecCcccee
Q psy8748 1713 DGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGM-----DNMCTVYDLNNRDST-GAAKVIRELLGYEGFLS 1786 (2004)
Q Consensus 1713 DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~-----DGtIrVWDl~t~~~~-~~~k~i~sl~gh~~~Vs 1786 (2004)
|.++++||+++|+.+..++. ..+|..+.|+++|++++.... .+.|.++|++..... ....+...+..+...++
T Consensus 73 D~t~kLWDv~tGk~la~~k~-~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit 151 (327)
T KOG0643|consen 73 DQTAKLWDVETGKQLATWKT-NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKIT 151 (327)
T ss_pred cceeEEEEcCCCcEEEEeec-CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCcccee
Confidence 99999999999999999884 567999999999998887654 478999999864422 23344666777778888
Q ss_pred eeEEeC-CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecC
Q psy8748 1787 SCRFID-DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGH 1865 (2004)
Q Consensus 1787 svafsd-d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h 1865 (2004)
.+.|.+ +..+++|..||.|.+||.++|.........|...|+.++++++..++++++.|.+-++||.++-+.++++. .
T Consensus 152 ~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~-t 230 (327)
T KOG0643|consen 152 SALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYT-T 230 (327)
T ss_pred eeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEEEee-e
Confidence 888885 55689999999999999999988878778899999999999999999999999999999999999988885 4
Q ss_pred CCCeEEEEEeCCCCEEEEEECCCe--EEEEEccCCceeEEE----------cCCCCCCCeEEEEEcCCCCEEEEEeCCCe
Q psy8748 1866 EADVNSVCFHPSGLAFATGSEDKT--ARLFDIRADQQIATY----------LPPNKNSGFTSCAVSSSGRYIFCGSDDNN 1933 (2004)
Q Consensus 1866 ~s~ItsIafSPdg~~LaSgS~DGt--IrIWDLrtgk~i~t~----------~~~~~~s~ItsLafSPdG~~LaSGSsDGs 1933 (2004)
..+|++.+++|...+++.|+.... |.-=+.+.|+....| ...+|-++|++++|+|+|+..++|+.||.
T Consensus 231 e~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~ 310 (327)
T KOG0643|consen 231 ERPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGY 310 (327)
T ss_pred cccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCce
Confidence 789999999998777777654322 222222333222221 22577899999999999999999999999
Q ss_pred EEEEECC
Q psy8748 1934 VHVWDLL 1940 (2004)
Q Consensus 1934 IrIWDL~ 1940 (2004)
|++.-..
T Consensus 311 VR~h~Fd 317 (327)
T KOG0643|consen 311 VRLHHFD 317 (327)
T ss_pred EEEEEec
Confidence 9998653
No 87
>KOG1539|consensus
Probab=99.90 E-value=1.3e-21 Score=243.18 Aligned_cols=375 Identities=17% Similarity=0.254 Sum_probs=283.9
Q ss_pred eEEEEEccC--CCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCcccccccc--CCCCcc
Q psy8748 1558 RNAVSFHAC--STLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMM--KPTSSI 1633 (2004)
Q Consensus 1558 VtsVsFSPd--Gk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~--spdgSi 1633 (2004)
|+++ +||. -+.+.. |+.+|.+.+|++.+ ++.+.++++...++.+-.+...=++.. ..+|.+
T Consensus 162 Ital-~HP~TYLNKIvv-Gs~~G~lql~Nvrt-------------~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~V 226 (910)
T KOG1539|consen 162 ITAL-LHPSTYLNKIVV-GSSQGRLQLWNVRT-------------GKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTV 226 (910)
T ss_pred eeeE-ecchhheeeEEE-eecCCcEEEEEecc-------------CcEEEEecccccceeEeccCCcceEEEEeccCceE
Confidence 6655 5665 223444 99999999999999 788888887777666644322211100 001110
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCE-EEEEeC
Q psy8748 1634 NIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRH-CVSGSL 1712 (2004)
Q Consensus 1634 di~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~-LASGS~ 1712 (2004)
-+ -+.. .-+.+.+++.-.++|++++|.-||.. +|+|+.
T Consensus 227 ii------------------------------------fNlK-----~dkil~sFk~d~g~VtslSFrtDG~p~las~~~ 265 (910)
T KOG1539|consen 227 II------------------------------------FNLK-----FDKILMSFKQDWGRVTSLSFRTDGNPLLASGRS 265 (910)
T ss_pred EE------------------------------------EEcc-----cCcEEEEEEccccceeEEEeccCCCeeEEeccC
Confidence 00 0000 11224445544699999999999984 677777
Q ss_pred CCeEEEEECCCCceEEEee-CCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe
Q psy8748 1713 DGKLIIWDTWTGNKTQVIP-LRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI 1791 (2004)
Q Consensus 1713 DGtIrVWDl~Tgk~l~ti~-~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs 1791 (2004)
.|.+.+||++..+.+.... .|.+.|....|.+....+++++.|..+++|-.++++. ..+..+...||..+..++.|.
T Consensus 266 ~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg--~pR~LR~R~GHs~Pp~~irfy 343 (910)
T KOG1539|consen 266 NGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDG--VPRLLRSRGGHSAPPSCIRFY 343 (910)
T ss_pred CceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCC--cchheeeccCCCCCchheeee
Confidence 8999999999988877765 7989999999999999999999999999998885542 245555666677776666665
Q ss_pred --CCCcEEEeecCCeEEEE-------------------------------------------------------------
Q psy8748 1792 --DDTTLLTGSGDMKIVTW------------------------------------------------------------- 1808 (2004)
Q Consensus 1792 --dd~~LlSgS~DGtI~IW------------------------------------------------------------- 1808 (2004)
.+..+++++.|++.+.+
T Consensus 344 ~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~ 423 (910)
T KOG1539|consen 344 GSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRS 423 (910)
T ss_pred ccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcce
Confidence 22335555555544444
Q ss_pred ----ECCCCceeEEee-----ccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEE---ecCCCCeEEEEEeC
Q psy8748 1809 ----NLETGQRIHEVA-----QAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTF---FGHEADVNSVCFHP 1876 (2004)
Q Consensus 1809 ----Dl~tg~~i~~il-----~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl---~~h~s~ItsIafSP 1876 (2004)
+.+....-...+ +.....+++++.++.|++.+.|+..|.|-+|++.+|-....+ ..|.++|++++...
T Consensus 424 ~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~ 503 (910)
T KOG1539|consen 424 AYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDG 503 (910)
T ss_pred EEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecC
Confidence 333222111111 112356889999999999999999999999999999888888 58999999999999
Q ss_pred CCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeE
Q psy8748 1877 SGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVT 1956 (2004)
Q Consensus 1877 dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~Vt 1956 (2004)
-++.+++++.+|.+.+||..+......+. -...+.++..+.....++++.+|-.|+++|+.+.+.++.+.+|.+.|+
T Consensus 504 ~n~~~vsa~~~Gilkfw~f~~k~l~~~l~---l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nrit 580 (910)
T KOG1539|consen 504 TNRLLVSAGADGILKFWDFKKKVLKKSLR---LGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRIT 580 (910)
T ss_pred CCceEEEccCcceEEEEecCCcceeeeec---cCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhcccccee
Confidence 99999999999999999999887666663 335688888998889999999999999999999999999999999999
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEEee
Q psy8748 1957 SISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVY 1993 (2004)
Q Consensus 1957 sLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik~~ 1993 (2004)
+++|||||++|++++.|++|++||+.++.++..+..-
T Consensus 581 d~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd 617 (910)
T KOG1539|consen 581 DMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVD 617 (910)
T ss_pred eeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecC
Confidence 9999999999999999999999999999877766543
No 88
>KOG0275|consensus
Probab=99.90 E-value=8.1e-23 Score=231.16 Aligned_cols=259 Identities=20% Similarity=0.341 Sum_probs=227.5
Q ss_pred CCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCc--ceEEEEEecCccceeeeEEeCC-CcEEEeecCCeEEEEE
Q psy8748 1733 RSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGA--AKVIRELLGYEGFLSSCRFIDD-TTLLTGSGDMKIVTWN 1809 (2004)
Q Consensus 1733 Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~--~k~i~sl~gh~~~Vssvafsdd-~~LlSgS~DGtI~IWD 1809 (2004)
....+.|..|+|||+++++|+.||.|.+|++.+++.... ......+.-+...+.|+.|+.+ ..+++|+.||.|++|.
T Consensus 212 ~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWr 291 (508)
T KOG0275|consen 212 QKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWR 291 (508)
T ss_pred cccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEE
Confidence 455688999999999999999999999999987753322 2233455667889999999954 5689999999999999
Q ss_pred CCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCe
Q psy8748 1810 LETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKT 1889 (2004)
Q Consensus 1810 l~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGt 1889 (2004)
+.+|.++.++-..|...|+|+.|+.|+..+++++.|.++++.-+++|++++.+++|.+.|+...|.++|.++++++.||+
T Consensus 292 i~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgt 371 (508)
T KOG0275|consen 292 IETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGT 371 (508)
T ss_pred EecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCcc
Confidence 99999998888899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEccCCceeEEEcCCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCeeeEEEcc---CCCCeEEEEEcCCCC
Q psy8748 1890 ARLFDIRADQQIATYLPPNKNSGFTSCAVSS-SGRYIFCGSDDNNVHVWDLLKTTHNGVLSG---HENRVTSISLSPNGM 1965 (2004)
Q Consensus 1890 IrIWDLrtgk~i~t~~~~~~~s~ItsLafSP-dG~~LaSGSsDGsIrIWDL~tge~l~tL~g---Hs~~VtsLaFSPDg~ 1965 (2004)
|++|+.++..+..++...+...+|..+..-| +...++++...++|+|.++ .|+.++.+.. ..+...+.+.+|.|.
T Consensus 372 vkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNrsntv~imn~-qGQvVrsfsSGkREgGdFi~~~lSpkGe 450 (508)
T KOG0275|consen 372 VKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNRSNTVYIMNM-QGQVVRSFSSGKREGGDFINAILSPKGE 450 (508)
T ss_pred EEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcCCCeEEEEec-cceEEeeeccCCccCCceEEEEecCCCc
Confidence 9999999999999998888888899988888 4568888889999999997 6777777743 345677788999999
Q ss_pred EEEEEECCCeEEEEECCCCeEEEEEEe
Q psy8748 1966 ALVTSSWDQFVKVWQESNTIVWKVLKV 1992 (2004)
Q Consensus 1966 ~LaSgS~DGtIrIWdlstg~l~k~Ik~ 1992 (2004)
++++.+.|+.++.|...+|+.-+.+.+
T Consensus 451 wiYcigED~vlYCF~~~sG~LE~tl~V 477 (508)
T KOG0275|consen 451 WIYCIGEDGVLYCFSVLSGKLERTLPV 477 (508)
T ss_pred EEEEEccCcEEEEEEeecCceeeeeec
Confidence 999999999999999999976554443
No 89
>KOG0277|consensus
Probab=99.90 E-value=1.6e-22 Score=224.80 Aligned_cols=279 Identities=20% Similarity=0.282 Sum_probs=228.7
Q ss_pred eEEEEeC-CCCEEEEE-------eCCCeEEEEECCCCceEEEeeC--CCCceEEEEEecC-CCEEEEeecCCeEEEEEcC
Q psy8748 1696 NSVHYSG-DSRHCVSG-------SLDGKLIIWDTWTGNKTQVIPL--RSAWVMSVAFAQS-GNFVACGGMDNMCTVYDLN 1764 (2004)
Q Consensus 1696 tsLaFSP-DG~~LASG-------S~DGtIrVWDl~Tgk~l~ti~~--Ht~~ItsLafSPd-g~~LaSGS~DGtIrVWDl~ 1764 (2004)
.++.||| -.++||.+ ...|++.|.++..++.+..... -.+.+..++|+++ .+.+++++.||.+++||..
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~ 91 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT 91 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence 4788888 22233332 1258999999876555544432 3567999999985 5688899999999999964
Q ss_pred CCCCCCcceEEEEEecCccceeeeEEeC--CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC-CCCEEEE
Q psy8748 1765 NRDSTGAAKVIRELLGYEGFLSSCRFID--DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP-DGQYFVT 1841 (2004)
Q Consensus 1765 t~~~~~~~k~i~sl~gh~~~Vssvafsd--d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP-dg~~LaS 1841 (2004)
. ...++..++.|...|.++.|.. ...+++++.||+|++|+...++.+.+ +.+|...|...+|+| .++.+++
T Consensus 92 ~-----~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~T-f~gh~~~Iy~a~~sp~~~nlfas 165 (311)
T KOG0277|consen 92 M-----PSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQT-FNGHNSCIYQAAFSPHIPNLFAS 165 (311)
T ss_pred C-----CCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEe-ecCCccEEEEEecCCCCCCeEEE
Confidence 3 3457788889999999999984 44588889999999999999888855 578999999999999 6789999
Q ss_pred EECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeC-CCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcC
Q psy8748 1842 GSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHP-SGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSS 1920 (2004)
Q Consensus 1842 GS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSP-dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSP 1920 (2004)
++.||.+++||++.......+..|...|.|+.|+. +.+.+++|+.|+.|++||+++-+.. .+...+|.-.|..+.|||
T Consensus 166 ~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~p-l~eL~gh~~AVRkvk~Sp 244 (311)
T KOG0277|consen 166 ASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTP-LFELNGHGLAVRKVKFSP 244 (311)
T ss_pred ccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhcccc-ceeecCCceEEEEEecCc
Confidence 99999999999986555555889999999999998 6778999999999999999976643 233367788999999999
Q ss_pred C-CCEEEEEeCCCeEEEEECCC-CeeeEEEccCCCCeEEEEEcC-CCCEEEEEECCCeEEEEEC
Q psy8748 1921 S-GRYIFCGSDDNNVHVWDLLK-TTHNGVLSGHENRVTSISLSP-NGMALVTSSWDQFVKVWQE 1981 (2004)
Q Consensus 1921 d-G~~LaSGSsDGsIrIWDL~t-ge~l~tL~gHs~~VtsLaFSP-Dg~~LaSgS~DGtIrIWdl 1981 (2004)
. ...|++++.|-+++|||... ...+.+...|+.-|.++.|++ ++.++|++|.|+.++||+.
T Consensus 245 h~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 245 HHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred chhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 4 56889999999999999874 445666778999999999987 6778999999999999984
No 90
>KOG0973|consensus
Probab=99.90 E-value=5.3e-22 Score=254.15 Aligned_cols=251 Identities=18% Similarity=0.279 Sum_probs=209.3
Q ss_pred ccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCC-------C-----------ceEEEeeCCCCceEEEEEecC
Q psy8748 1684 PKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWT-------G-----------NKTQVIPLRSAWVMSVAFAQS 1745 (2004)
Q Consensus 1684 pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~T-------g-----------k~l~ti~~Ht~~ItsLafSPd 1745 (2004)
.+..+..|.+.|+|+.|+|||++||+|++|+.|.||+... | +....+.+|...|..++|+|+
T Consensus 61 ~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~ 140 (942)
T KOG0973|consen 61 HLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD 140 (942)
T ss_pred hheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCC
Confidence 3556778999999999999999999999999999998662 1 245677899999999999999
Q ss_pred CCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCC-CcEEEeecCCeEEEEECCCCceeEEeecc--
Q psy8748 1746 GNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD-TTLLTGSGDMKIVTWNLETGQRIHEVAQA-- 1822 (2004)
Q Consensus 1746 g~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd-~~LlSgS~DGtI~IWDl~tg~~i~~il~~-- 1822 (2004)
+.++++++.|++|.+|+..+ +.....+.+|.+.|..+.|.+- .++++-+.|++|++|+..+....+.+...
T Consensus 141 ~~~lvS~s~DnsViiwn~~t------F~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~ 214 (942)
T KOG0973|consen 141 DSLLVSVSLDNSVIIWNAKT------FELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFE 214 (942)
T ss_pred ccEEEEecccceEEEEcccc------ceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchh
Confidence 99999999999999999874 4778899999999999999964 56888899999999998775555444222
Q ss_pred ---ccCCeEEEEECCCCCEEEEEEC----CCeEEEEECCCCeEEEEEecCCCCeEEEEEeCC-----CC-----------
Q psy8748 1823 ---HIGDVVSISLSPDGQYFVTGSV----DKSCKLWDFREKKCVQTFFGHEADVNSVCFHPS-----GL----------- 1879 (2004)
Q Consensus 1823 ---h~~~ItsLafSPdg~~LaSGS~----DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPd-----g~----------- 1879 (2004)
....+..+.|+|||.+|++... -.++.|.+-.+.+.-..+.+|..++.++.|+|. .+
T Consensus 215 ~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~~~y 294 (942)
T KOG0973|consen 215 ESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPNCYY 294 (942)
T ss_pred hCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCCcce
Confidence 2234778999999999998642 236999998888888899999999999999981 11
Q ss_pred -EEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy8748 1880 -AFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLK 1941 (2004)
Q Consensus 1880 -~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~t 1941 (2004)
.+++|+.|+.|.||.....+++.... .-....|..++|+|||..|++++.||+|.++.+..
T Consensus 295 ~i~AvgSqDrSlSVW~T~~~RPl~vi~-~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fee 356 (942)
T KOG0973|consen 295 CIAAVGSQDRSLSVWNTALPRPLFVIH-NLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFEE 356 (942)
T ss_pred EEEEEecCCccEEEEecCCCCchhhhh-hhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcch
Confidence 57899999999999987666654442 22346799999999999999999999999999864
No 91
>KOG2106|consensus
Probab=99.89 E-value=6.4e-21 Score=226.53 Aligned_cols=299 Identities=19% Similarity=0.250 Sum_probs=233.4
Q ss_pred cccceeEEEEeC--CCCEEEEE--eCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCC
Q psy8748 1691 HINKVNSVHYSG--DSRHCVSG--SLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNR 1766 (2004)
Q Consensus 1691 Ht~~VtsLaFSP--DG~~LASG--S~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~ 1766 (2004)
-..+|.|++||+ .|.++... +.+..+.|||...+......+..+..|....|+|.+..+++....|.+..|+.+.+
T Consensus 153 f~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~ 232 (626)
T KOG2106|consen 153 FDRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGG 232 (626)
T ss_pred ccccceeeeecccCCCceEEEecCCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCC
Confidence 446899999997 34455443 34567999999999988888888889999999998776666666889999998765
Q ss_pred CCCCcceEEEEEec-CccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECC
Q psy8748 1767 DSTGAAKVIRELLG-YEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVD 1845 (2004)
Q Consensus 1767 ~~~~~~k~i~sl~g-h~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~D 1845 (2004)
.. .+....+.+ ....|.|+.|.+++.+++|..+|.|.+|+..+.+...... .|.+.|.+++.-.+|.++- |+.|
T Consensus 233 ~l---~k~~~~fek~ekk~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~-aH~ggv~~L~~lr~GtllS-GgKD 307 (626)
T KOG2106|consen 233 SL---VKRQGIFEKREKKFVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVH-AHDGGVFSLCMLRDGTLLS-GGKD 307 (626)
T ss_pred ce---EEEeeccccccceEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEee-ecCCceEEEEEecCccEee-cCcc
Confidence 42 222222222 2378999999999999999999999999998877776666 9999999999999987555 9999
Q ss_pred CeEEEEECCCCe----------------------------------------EEEEEecCCCCeEEEEEeCCCCEEEEEE
Q psy8748 1846 KSCKLWDFREKK----------------------------------------CVQTFFGHEADVNSVCFHPSGLAFATGS 1885 (2004)
Q Consensus 1846 GsIrIWDlrs~k----------------------------------------~I~tl~~h~s~ItsIafSPdg~~LaSgS 1885 (2004)
..|..||-.-.+ ......+|....+.++.+|+.+.+++++
T Consensus 308 Rki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~g 387 (626)
T KOG2106|consen 308 RKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCG 387 (626)
T ss_pred ceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeecc
Confidence 999999832100 0111236778889999999999999999
Q ss_pred CCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCC
Q psy8748 1886 EDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGM 1965 (2004)
Q Consensus 1886 ~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~ 1965 (2004)
.|+.+++|+ ..+...+... ..+..|+.|+|.| .+++|+..|...+.|.++...+..-.. ..+++.++|+|+|.
T Consensus 388 qdk~v~lW~--~~k~~wt~~~---~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~ 460 (626)
T KOG2106|consen 388 QDKHVRLWN--DHKLEWTKII---EDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGA 460 (626)
T ss_pred CcceEEEcc--CCceeEEEEe---cCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCC
Confidence 999999999 4555555432 3568899999999 999999999999999998655554444 88999999999999
Q ss_pred EEEEEECCCeEEEEECCCC-eEEEEEEeecCCCCccccc
Q psy8748 1966 ALVTSSWDQFVKVWQESNT-IVWKVLKVYNLEKKTIFCV 2003 (2004)
Q Consensus 1966 ~LaSgS~DGtIrIWdlstg-~l~k~Ik~~~~h~~~VtsV 2003 (2004)
+||.|+.|+.|++|.++.+ ..+........ ..|+-+
T Consensus 461 ~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~g--s~ithL 497 (626)
T KOG2106|consen 461 FLAVGSHDNHIYIYRVSANGRKYSRVGKCSG--SPITHL 497 (626)
T ss_pred EEEEecCCCeEEEEEECCCCcEEEEeeeecC--ceeEEe
Confidence 9999999999999999754 44444443332 455443
No 92
>KOG0299|consensus
Probab=99.89 E-value=6.1e-22 Score=234.54 Aligned_cols=291 Identities=21% Similarity=0.253 Sum_probs=232.4
Q ss_pred CCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceee-EeecccccccccccCccccccccCCC
Q psy8748 1552 EPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCL-RAWKSIVDNLMSQEPATFRDLMMKPT 1630 (2004)
Q Consensus 1552 e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~l-kt~~g~~~~V~s~~~~~f~~ll~spd 1630 (2004)
.+|...|+||+++|++++.++ ++.||+|.-|++.+ ++.. ..|+. +
T Consensus 139 ~~H~~s~~~vals~d~~~~fs-ask~g~i~kw~v~t-------------gk~~~~i~~~--------------------~ 184 (479)
T KOG0299|consen 139 GKHQLSVTSVALSPDDKRVFS-ASKDGTILKWDVLT-------------GKKDRYIIER--------------------D 184 (479)
T ss_pred ccccCcceEEEeeccccceee-cCCCcceeeeehhc-------------Cccccccccc--------------------c
Confidence 457888999999999999999 99999999999988 3211 11110 0
Q ss_pred CcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEE
Q psy8748 1631 SSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSG 1710 (2004)
Q Consensus 1631 gSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASG 1710 (2004)
++ .... ..+.++.. ++|...|.+++.|+||+|||+|
T Consensus 185 ----------------ev------~k~~--------------------~~~~k~~r--~~h~keil~~avS~Dgkylatg 220 (479)
T KOG0299|consen 185 ----------------EV------LKSH--------------------GNPLKESR--KGHVKEILTLAVSSDGKYLATG 220 (479)
T ss_pred ----------------hh------hhhc--------------------cCCCCccc--ccccceeEEEEEcCCCcEEEec
Confidence 00 0000 00111111 4899999999999999999999
Q ss_pred eCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEE
Q psy8748 1711 SLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRF 1790 (2004)
Q Consensus 1711 S~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvaf 1790 (2004)
+.|..|.||+..+++.++.+++|.+.|.+++|-.....+++++.|+.|++|+++. ...+.++.+|.+.|..+..
T Consensus 221 g~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~------~s~vetlyGHqd~v~~Ida 294 (479)
T KOG0299|consen 221 GRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQ------LSYVETLYGHQDGVLGIDA 294 (479)
T ss_pred CCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhH------hHHHHHHhCCccceeeech
Confidence 9999999999999999999999999999999998889999999999999999974 4667789999999999988
Q ss_pred eCCCcEEE-eecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEe-cC---
Q psy8748 1791 IDDTTLLT-GSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFF-GH--- 1865 (2004)
Q Consensus 1791 sdd~~LlS-gS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~-~h--- 1865 (2004)
..-.++++ |+.|+++++|++..... .++.++.+.+-|++|-. ...|++|+.+|.|.+|++-..+++.+.. +|
T Consensus 295 L~reR~vtVGgrDrT~rlwKi~eesq--lifrg~~~sidcv~~In-~~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~ 371 (479)
T KOG0299|consen 295 LSRERCVTVGGRDRTVRLWKIPEESQ--LIFRGGEGSIDCVAFIN-DEHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVI 371 (479)
T ss_pred hcccceEEeccccceeEEEeccccce--eeeeCCCCCeeeEEEec-ccceeeccCCceEEEeeecccCceeEeecccccc
Confidence 87666655 55999999999965444 35668888999999984 5679999999999999999888776653 12
Q ss_pred --------CCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCce-eEEEcCCCCCCCeEEEEEcCCCCEEEEEe
Q psy8748 1866 --------EADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQ-IATYLPPNKNSGFTSCAVSSSGRYIFCGS 1929 (2004)
Q Consensus 1866 --------~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~-i~t~~~~~~~s~ItsLafSPdG~~LaSGS 1929 (2004)
...|++++..|..+++++|+.+|.|++|-+..+-. +..+..-.-.+-|+.++|+++|+.+++|.
T Consensus 372 ~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivagi 444 (479)
T KOG0299|consen 372 PELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAGI 444 (479)
T ss_pred CCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEec
Confidence 23789999999999999999999999999987722 22222223456799999999999877764
No 93
>PTZ00420 coronin; Provisional
Probab=99.89 E-value=1e-20 Score=241.34 Aligned_cols=277 Identities=14% Similarity=0.194 Sum_probs=209.8
Q ss_pred EeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecC-CCEEEEeecCCeEEEEEcCCCCCC--CcceEEEEEecCcccee
Q psy8748 1710 GSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQS-GNFVACGGMDNMCTVYDLNNRDST--GAAKVIRELLGYEGFLS 1786 (2004)
Q Consensus 1710 GS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPd-g~~LaSGS~DGtIrVWDl~t~~~~--~~~k~i~sl~gh~~~Vs 1786 (2004)
||.+|.|++|+......+..+.+|.+.|.+++|+|+ +++|++|+.||.|++|++...... ........+.+|...|.
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~ 129 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKIS 129 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEE
Confidence 667889999998888888889999999999999996 789999999999999999754211 11123446778999999
Q ss_pred eeEEeCCCc--EEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEec
Q psy8748 1787 SCRFIDDTT--LLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFG 1864 (2004)
Q Consensus 1787 svafsdd~~--LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~ 1864 (2004)
++.|++... +++++.||.|++||+++++....+ .+...|.+++|+++|.+|++++.|+.|++||+++++.+..+.+
T Consensus 130 sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i--~~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~g 207 (568)
T PTZ00420 130 IIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQI--NMPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHI 207 (568)
T ss_pred EEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEE--ecCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 999997553 568899999999999998876554 3567899999999999999999999999999999999999999
Q ss_pred CCCCeEEE-----EEeCCCCEEEEEECCC----eEEEEEccC-CceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeE
Q psy8748 1865 HEADVNSV-----CFHPSGLAFATGSEDK----TARLFDIRA-DQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNV 1934 (2004)
Q Consensus 1865 h~s~ItsI-----afSPdg~~LaSgS~DG----tIrIWDLrt-gk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsI 1934 (2004)
|.+.+.+. .|++++.++++++.|+ .|++||+++ ++.+.........+.+......++|.++++|+.|+.|
T Consensus 208 H~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tI 287 (568)
T PTZ00420 208 HDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNC 287 (568)
T ss_pred ccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeE
Confidence 98765433 3458888999988774 799999995 5555555434433334444445568999999999999
Q ss_pred EEEECCCCeeeEEEc--cCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEE
Q psy8748 1935 HVWDLLKTTHNGVLS--GHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLK 1991 (2004)
Q Consensus 1935 rIWDL~tge~l~tL~--gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik 1991 (2004)
++|++..+.. ..+. .+..++.+++|.|....=+.. --..|+|.+.....++.+.
T Consensus 288 r~~e~~~~~~-~~l~~~~s~~p~~g~~f~Pkr~~dv~~--cEi~R~~kl~~~~~i~pis 343 (568)
T PTZ00420 288 RYYQHSLGSI-RKVNEYKSCSPFRSFGFLPKQICDVYK--CEIGRVYKNENNSSIRPIS 343 (568)
T ss_pred EEEEccCCcE-EeecccccCCCccceEEccccccCchh--hhHhHHhhhcCCCeEEEEE
Confidence 9999977643 2222 256788999999974321111 1234566665433344444
No 94
>KOG0641|consensus
Probab=99.89 E-value=1e-20 Score=206.40 Aligned_cols=247 Identities=21% Similarity=0.376 Sum_probs=201.1
Q ss_pred ccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCce-----EEEeeCCCCceEEEEEecC----CCEEEEeecCCeE
Q psy8748 1688 LKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNK-----TQVIPLRSAWVMSVAFAQS----GNFVACGGMDNMC 1758 (2004)
Q Consensus 1688 L~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~-----l~ti~~Ht~~ItsLafSPd----g~~LaSGS~DGtI 1758 (2004)
-+.|.+.|.|.+|||+|+++++|+.|++|++.-+....+ -..+..|.+.|..++|..+ +..|++++ -|..
T Consensus 85 ~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~g-agdc 163 (350)
T KOG0641|consen 85 NKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAG-AGDC 163 (350)
T ss_pred ccccCccEEEEEecCccCeEEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecC-CCcc
Confidence 356999999999999999999999999999986543322 2356789999999999754 34666654 3445
Q ss_pred EEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeecc-c-----cCCeEEEEE
Q psy8748 1759 TVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQA-H-----IGDVVSISL 1832 (2004)
Q Consensus 1759 rVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~-h-----~~~ItsLaf 1832 (2004)
++|-.+-+ .......+.+|.+.|..+...++-.+++|+.|.+|++||++-..++...-.. | ...|.++++
T Consensus 164 ~iy~tdc~----~g~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~v 239 (350)
T KOG0641|consen 164 KIYITDCG----RGQGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAV 239 (350)
T ss_pred eEEEeecC----CCCcceeecCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEE
Confidence 55544332 3466778899999999988888999999999999999999988777554211 1 256899999
Q ss_pred CCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCC--ceeEEEcCCCCC
Q psy8748 1833 SPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRAD--QQIATYLPPNKN 1910 (2004)
Q Consensus 1833 SPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtg--k~i~t~~~~~~~ 1910 (2004)
.|.|+++++|-.|....+||++.++.++.+..|...|+|+.|+|...++++++.|.+|++-|+... ..+.......|.
T Consensus 240 dpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehk 319 (350)
T KOG0641|consen 240 DPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHK 319 (350)
T ss_pred CCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEecc
Confidence 999999999999999999999999999999999999999999999999999999999999998732 112222234566
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1911 SGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1911 s~ItsLafSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
..+..+.|+|..--+++.+.|.++.+|-+
T Consensus 320 dk~i~~rwh~~d~sfisssadkt~tlwa~ 348 (350)
T KOG0641|consen 320 DKAIQCRWHPQDFSFISSSADKTATLWAL 348 (350)
T ss_pred CceEEEEecCccceeeeccCcceEEEecc
Confidence 77888999999989999999999999975
No 95
>KOG0301|consensus
Probab=99.89 E-value=1.4e-21 Score=239.53 Aligned_cols=282 Identities=23% Similarity=0.352 Sum_probs=240.0
Q ss_pred cccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceE--EEeeCCCCceEE-EEEec-CCCEEEEeecCCeE
Q psy8748 1683 MPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKT--QVIPLRSAWVMS-VAFAQ-SGNFVACGGMDNMC 1758 (2004)
Q Consensus 1683 ~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l--~ti~~Ht~~Its-LafSP-dg~~LaSGS~DGtI 1758 (2004)
+..+++.||...|..+++.+. .+++++|.||++++|+-..++.+ ..+.+|.+.|.. +++.+ ++-.+++|+.|+.|
T Consensus 5 ~ls~~l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i 83 (745)
T KOG0301|consen 5 KLSHELEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTI 83 (745)
T ss_pred eeEEEeccCccchheeEecCC-eEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceE
Confidence 346789999999999998654 48999999999999997555444 346778888877 88886 45579999999999
Q ss_pred EEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCE
Q psy8748 1759 TVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQY 1838 (2004)
Q Consensus 1759 rVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~ 1838 (2004)
.+|..... .....+.+|...|+++....+..+++|+.|.++++|-...-.. ...+|...|++++.-|++ .
T Consensus 84 ~v~~~~~~------~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~TakvW~~~~l~~---~l~gH~asVWAv~~l~e~-~ 153 (745)
T KOG0301|consen 84 IVFKLSQA------EPLYTLKGHKSNVCSLSIGEDGTLISGSWDSTAKVWRIGELVY---SLQGHTASVWAVASLPEN-T 153 (745)
T ss_pred EEEecCCC------CchhhhhccccceeeeecCCcCceEecccccceEEecchhhhc---ccCCcchheeeeeecCCC-c
Confidence 99998753 5677889999999999988777799999999999998754332 267999999999999988 8
Q ss_pred EEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEE
Q psy8748 1839 FVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAV 1918 (2004)
Q Consensus 1839 LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLaf 1918 (2004)
+++|+.|.+|++|.- ++.++++.+|.+.|+++++-+++ .|++++.||.|+.|++ +|.++... .+|..-+.+++.
T Consensus 154 ~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~l~~~--~ghtn~vYsis~ 227 (745)
T KOG0301|consen 154 YVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEVLLEM--HGHTNFVYSISM 227 (745)
T ss_pred EEeccCcceeeeccC--CchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCceeeee--eccceEEEEEEe
Confidence 899999999999985 77889999999999999999876 5888999999999999 57777666 577788999998
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1919 SSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1919 SPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
..++..++++++|++++||+.. ++...+.-....|+++.+-++|+ +++|+.||.||||..+..
T Consensus 228 ~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k~ 290 (745)
T KOG0301|consen 228 ALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDKD 290 (745)
T ss_pred cCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEeccc
Confidence 8889999999999999999965 77888876667899999998887 778888999999988753
No 96
>KOG0299|consensus
Probab=99.89 E-value=3.6e-21 Score=228.11 Aligned_cols=286 Identities=24% Similarity=0.381 Sum_probs=238.3
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE-e-----------------eCCCCceEEEEEecCC
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQV-I-----------------PLRSAWVMSVAFAQSG 1746 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~t-i-----------------~~Ht~~ItsLafSPdg 1746 (2004)
...+..|.-.|.+++++|++.+.++++.||+|.=|++.+|+.... + +.|...|.+++.++||
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dg 214 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDG 214 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCC
Confidence 567788999999999999999999999999999999988874411 1 2677889999999999
Q ss_pred CEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCC-CcEEEeecCCeEEEEECCCCceeEEeeccccC
Q psy8748 1747 NFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD-TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIG 1825 (2004)
Q Consensus 1747 ~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd-~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~ 1825 (2004)
++|++|+.|..|.||+.++. ..+..+.+|.+.|.+++|-.+ +.+++++.|+.|++|+++....+ ..+.+|.+
T Consensus 215 kylatgg~d~~v~Iw~~~t~------ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~v-etlyGHqd 287 (479)
T KOG0299|consen 215 KYLATGGRDRHVQIWDCDTL------EHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYV-ETLYGHQD 287 (479)
T ss_pred cEEEecCCCceEEEecCccc------chhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHH-HHHhCCcc
Confidence 99999999999999999865 455668999999999999854 56999999999999999887766 44579999
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEc
Q psy8748 1826 DVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYL 1905 (2004)
Q Consensus 1826 ~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~ 1905 (2004)
.|.++....-++.+-+|+.|+++++|++.... ...+.++.+.+-|++|-.+ .+|++|+.+|.|.+|++.+.+++.+..
T Consensus 288 ~v~~IdaL~reR~vtVGgrDrT~rlwKi~ees-qlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~ 365 (479)
T KOG0299|consen 288 GVLGIDALSRERCVTVGGRDRTVRLWKIPEES-QLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSR 365 (479)
T ss_pred ceeeechhcccceEEeccccceeEEEeccccc-eeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeecccCceeEee
Confidence 99999998888889999999999999995433 4566788999999999855 489999999999999999888877663
Q ss_pred CCCC----------CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC----eeeEEEccCCCCeEEEEEcCCCCEEEEE-
Q psy8748 1906 PPNK----------NSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKT----THNGVLSGHENRVTSISLSPNGMALVTS- 1970 (2004)
Q Consensus 1906 ~~~~----------~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tg----e~l~tL~gHs~~VtsLaFSPDg~~LaSg- 1970 (2004)
..++ ...|++++..|..+++++|+.+|.|++|-+..+ .++..+. -.+.|++++|+++|+.+++|
T Consensus 366 ~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~ivagi 444 (479)
T KOG0299|consen 366 LAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIVAGI 444 (479)
T ss_pred ccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEEEec
Confidence 3221 237899999999999999999999999998776 3444444 57889999999999966555
Q ss_pred ECCCeEEEEE
Q psy8748 1971 SWDQFVKVWQ 1980 (2004)
Q Consensus 1971 S~DGtIrIWd 1980 (2004)
|....+-=|-
T Consensus 445 GkEhRlGRW~ 454 (479)
T KOG0299|consen 445 GKEHRLGRWW 454 (479)
T ss_pred ccccccceee
Confidence 5555554443
No 97
>KOG0308|consensus
Probab=99.88 E-value=2.3e-22 Score=244.70 Aligned_cols=287 Identities=20% Similarity=0.392 Sum_probs=241.1
Q ss_pred ccccee---EEEEe-CCCCEEEEEeCCCeEEEEECCCCc------eEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEE
Q psy8748 1691 HINKVN---SVHYS-GDSRHCVSGSLDGKLIIWDTWTGN------KTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTV 1760 (2004)
Q Consensus 1691 Ht~~Vt---sLaFS-PDG~~LASGS~DGtIrVWDl~Tgk------~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrV 1760 (2004)
|...|. .+..+ |.++||+|||.||.|++|++.... ....+..|.++|..+....+++.|++++.|-+|++
T Consensus 20 n~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~ 99 (735)
T KOG0308|consen 20 NRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKV 99 (735)
T ss_pred ccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEE
Confidence 555555 44444 577899999999999999876432 35677889999999999999999999999999999
Q ss_pred EEcCCCCCCCcceEEEEEecCccceeeeEEe--CCCcEEEeecCCeEEEEECCCCce--eE--------EeeccccCCeE
Q psy8748 1761 YDLNNRDSTGAAKVIRELLGYEGFLSSCRFI--DDTTLLTGSGDMKIVTWNLETGQR--IH--------EVAQAHIGDVV 1828 (2004)
Q Consensus 1761 WDl~t~~~~~~~k~i~sl~gh~~~Vssvafs--dd~~LlSgS~DGtI~IWDl~tg~~--i~--------~il~~h~~~It 1828 (2004)
|+..... .-+...+..|.+.|.|+++. +...+++|+-|+.|.+||++++.. +. ....++...|.
T Consensus 100 W~~~~~~----~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siY 175 (735)
T KOG0308|consen 100 WNAHKDN----TFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIY 175 (735)
T ss_pred eecccCc----chhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCcccee
Confidence 9997642 23456677899999999994 445688999999999999997732 11 11237888999
Q ss_pred EEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCC
Q psy8748 1829 SISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPN 1908 (2004)
Q Consensus 1829 sLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~ 1908 (2004)
+++.++.|..|++|+..+.+++||.++++.+..+.+|...|.++..++||..+++++.||+|++||+...+++.++. .
T Consensus 176 SLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~--v 253 (735)
T KOG0308|consen 176 SLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYI--V 253 (735)
T ss_pred eeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEE--e
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999985 4
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q psy8748 1909 KNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESN 1983 (2004)
Q Consensus 1909 ~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlst 1983 (2004)
|...+.++..+|+-.++++|+.||.|..=|+++......+-....+|..+..+.+.+-+-+++.|+.|+-|...-
T Consensus 254 H~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~~~ 328 (735)
T KOG0308|consen 254 HKEGVWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKLEP 328 (735)
T ss_pred ccCceEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhhhccccCCceeeeccccceecCCcc
Confidence 556699999999999999999999999999998654444444667788888876555567888899999997764
No 98
>KOG1446|consensus
Probab=99.88 E-value=2.2e-20 Score=214.44 Aligned_cols=268 Identities=23% Similarity=0.348 Sum_probs=219.2
Q ss_pred ceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe-CCCcEEEeec--
Q psy8748 1725 NKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSG-- 1801 (2004)
Q Consensus 1725 k~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~-- 1801 (2004)
+..+.+....+.|.++.|+++|.++++++.|..+++||..++ +..+.+..+.-.+..+.|. ..+.++.++.
T Consensus 5 ~~ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g------~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~ 78 (311)
T KOG1446|consen 5 RPAKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSG------KQVKTINSKKYGVDLACFTHHSNTVIHSSTKE 78 (311)
T ss_pred ccccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCC------ceeeEeecccccccEEEEecCCceEEEccCCC
Confidence 334445556788999999999999999999999999999765 5566666666677777776 4445665555
Q ss_pred CCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEE
Q psy8748 1802 DMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAF 1881 (2004)
Q Consensus 1802 DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~L 1881 (2004)
|.+|+..++.+++.+ +.+.+|...|.+++.+|-+..+++++.|++|++||++..++...+..... ..++|.|+|-++
T Consensus 79 d~tIryLsl~dNkyl-RYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~--pi~AfDp~GLif 155 (311)
T KOG1446|consen 79 DDTIRYLSLHDNKYL-RYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR--PIAAFDPEGLIF 155 (311)
T ss_pred CCceEEEEeecCceE-EEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCC--cceeECCCCcEE
Confidence 889999999999988 67799999999999999999999999999999999998877666644333 357899999999
Q ss_pred EEEECCCeEEEEEccCC--ceeEEEcCC-CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCe---
Q psy8748 1882 ATGSEDKTARLFDIRAD--QQIATYLPP-NKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRV--- 1955 (2004)
Q Consensus 1882 aSgS~DGtIrIWDLrtg--k~i~t~~~~-~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~V--- 1955 (2004)
|++...+.|++||++.. .+..++... +.....+.+.|+|||++++.++..+.+++.|.-+|....++.++...-
T Consensus 156 A~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~ 235 (311)
T KOG1446|consen 156 ALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLP 235 (311)
T ss_pred EEecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcc
Confidence 99988889999999864 334444333 445778999999999999999999999999999999999988765443
Q ss_pred EEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEEeecCCCCccccc
Q psy8748 1956 TSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003 (2004)
Q Consensus 1956 tsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik~~~~h~~~VtsV 2003 (2004)
.+.+|+||++++++|+.||+|.+|++++|......+.. +.+.+.|+
T Consensus 236 ~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~--~~~~~~~~ 281 (311)
T KOG1446|consen 236 LSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGP--NGGPVSCV 281 (311)
T ss_pred eeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCC--CCCCcccc
Confidence 67789999999999999999999999999765554433 56666665
No 99
>KOG0641|consensus
Probab=99.88 E-value=3.8e-20 Score=202.00 Aligned_cols=295 Identities=23% Similarity=0.384 Sum_probs=237.4
Q ss_pred ccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECC------CCc---------eEEEeeCCCCceEEEEEecCC
Q psy8748 1682 LMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTW------TGN---------KTQVIPLRSAWVMSVAFAQSG 1746 (2004)
Q Consensus 1682 ~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~------Tgk---------~l~ti~~Ht~~ItsLafSPdg 1746 (2004)
+..+..| ..+..|++++|+|.|.+.++|+..++++|.-.. .+. ..+.-+.|.+.|+|.+|+|+|
T Consensus 23 f~~i~~l-~dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~g 101 (350)
T KOG0641|consen 23 FEAINIL-EDSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCG 101 (350)
T ss_pred eEEEEEe-cchhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCcc
Confidence 3344334 356789999999999999999999999987432 111 112235689999999999999
Q ss_pred CEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCC----c-EEE-eecCCeEEEEECCCCceeEEee
Q psy8748 1747 NFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT----T-LLT-GSGDMKIVTWNLETGQRIHEVA 1820 (2004)
Q Consensus 1747 ~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~----~-LlS-gS~DGtI~IWDl~tg~~i~~il 1820 (2004)
..+++|+.|.+|++..++....... .....+.-|.+.|..++|.++. . +++ |..|..|++-|..+|+..+ .+
T Consensus 102 eliatgsndk~ik~l~fn~dt~~~~-g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~-a~ 179 (350)
T KOG0641|consen 102 ELIATGSNDKTIKVLPFNADTCNAT-GHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFH-AL 179 (350)
T ss_pred CeEEecCCCceEEEEeccccccccc-CcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcce-ee
Confidence 9999999999999998875432222 2234567789999999998542 3 443 3456778888888888774 45
Q ss_pred ccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEec--C-----CCCeEEEEEeCCCCEEEEEECCCeEEEE
Q psy8748 1821 QAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFG--H-----EADVNSVCFHPSGLAFATGSEDKTARLF 1893 (2004)
Q Consensus 1821 ~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~--h-----~s~ItsIafSPdg~~LaSgS~DGtIrIW 1893 (2004)
.+|.+.|.++ ++-+|-.+++|+.|.+|++||++-..++.++.. | ...|.+++..|.|+.+++|-.|....+|
T Consensus 180 sghtghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~ly 258 (350)
T KOG0641|consen 180 SGHTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLY 258 (350)
T ss_pred cCCcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEE
Confidence 7899988886 334688999999999999999998888877642 1 2578999999999999999999999999
Q ss_pred EccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC----eeeEEEccCCCCeEEEEEcCCCCEEEE
Q psy8748 1894 DIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKT----THNGVLSGHENRVTSISLSPNGMALVT 1969 (2004)
Q Consensus 1894 DLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tg----e~l~tL~gHs~~VtsLaFSPDg~~LaS 1969 (2004)
|++.++.+..+ ..|...|.|+.|+|...|+++++.|..|++-|+... -++.....|.+.+..+.|+|..--+++
T Consensus 259 dirg~r~iq~f--~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfis 336 (350)
T KOG0641|consen 259 DIRGGRMIQRF--HPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFIS 336 (350)
T ss_pred EeeCCceeeee--CCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeee
Confidence 99999999998 566788999999999999999999999999998532 233445679999999999999999999
Q ss_pred EECCCeEEEEECC
Q psy8748 1970 SSWDQFVKVWQES 1982 (2004)
Q Consensus 1970 gS~DGtIrIWdls 1982 (2004)
.+.|.++.+|.+.
T Consensus 337 ssadkt~tlwa~~ 349 (350)
T KOG0641|consen 337 SSADKTATLWALN 349 (350)
T ss_pred ccCcceEEEeccC
Confidence 9999999999765
No 100
>KOG0294|consensus
Probab=99.88 E-value=7.9e-21 Score=216.79 Aligned_cols=263 Identities=22% Similarity=0.384 Sum_probs=215.9
Q ss_pred EEEEeCCCeEEEEECCCC------------ceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceE
Q psy8748 1707 CVSGSLDGKLIIWDTWTG------------NKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKV 1774 (2004)
Q Consensus 1707 LASGS~DGtIrVWDl~Tg------------k~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~ 1774 (2004)
+++|++...|.-+++.-. ..+..+..|.++|++++.+ +.++++|+.|.+|++||+... ..
T Consensus 4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~------~q 75 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKR------KQ 75 (362)
T ss_pred EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccch------hh
Confidence 566777666666654311 2245567899999999987 999999999999999999864 44
Q ss_pred EEEEecCccceeeeEEeCCC---cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy8748 1775 IRELLGYEGFLSSCRFIDDT---TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLW 1851 (2004)
Q Consensus 1775 i~sl~gh~~~Vssvafsdd~---~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIW 1851 (2004)
...+..|.+.++++.|.... .+++|+.||.|.+|+......+ ..+++|.+.|+.++++|.|++-++.+.|+.++.|
T Consensus 76 lg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~-~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~W 154 (362)
T KOG0294|consen 76 LGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELL-KSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTW 154 (362)
T ss_pred hcceeccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEe-eeecccccccceeEecCCCceEEEEcCCceeeee
Confidence 56677899999999998654 7999999999999999988666 5568999999999999999999999999999999
Q ss_pred ECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCC
Q psy8748 1852 DFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDD 1931 (2004)
Q Consensus 1852 Dlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsD 1931 (2004)
|+-.|+.-.... -......+.|+|.|.+|+.++.+ .|-+|.+.+.+.......+ ..+.|+.|. ++.++++|.+|
T Consensus 155 NLV~Gr~a~v~~-L~~~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~~~---~r~l~~~~l-~~~~L~vG~d~ 228 (362)
T KOG0294|consen 155 NLVRGRVAFVLN-LKNKATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIENP---KRILCATFL-DGSELLVGGDN 228 (362)
T ss_pred hhhcCccceeec-cCCcceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhhcc---ccceeeeec-CCceEEEecCC
Confidence 998887544442 23334459999999999988865 5999999877766555333 335555554 57789999999
Q ss_pred CeEEEEECCCCeeeEEEccCCCCeEEEEE--cCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1932 NNVHVWDLLKTTHNGVLSGHENRVTSISL--SPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1932 GsIrIWDL~tge~l~tL~gHs~~VtsLaF--SPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
+.|.+||..+..+...+.+|..+|.++.+ .|++.+|+|+|.||.|+|||++..
T Consensus 229 ~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 229 EWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDME 283 (362)
T ss_pred ceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEcccc
Confidence 99999999999999999999999999985 467899999999999999999865
No 101
>KOG0650|consensus
Probab=99.88 E-value=3.4e-21 Score=232.35 Aligned_cols=430 Identities=18% Similarity=0.258 Sum_probs=295.6
Q ss_pred CCccccccccccCCC------CCCccCCCCCCCCCCCCCCCCCCCCCC-CCCCeEEEEEccCCCEEEEeecCCCeEEEEE
Q psy8748 1512 SGSKSVLKKRWRKPR------TPNNYNVQGDASNPADTADIPTNAPEP-CKEQRNAVSFHACSTLLASLSSYQYTRKAWK 1584 (2004)
Q Consensus 1512 ~~s~~~L~~r~~k~~------~~~~yni~p~~~~~~ds~~~pt~a~e~-Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWD 1584 (2004)
..+++.++..|.+.. .+..|.+|......+....+....+.+ ..-+-+.-+|+|.-+||.. +..-+-|+
T Consensus 243 ~rmv~Air~Gwik~~~r~kee~~~~ydLW~~dd~~e~l~r~~~~~paPKl~lP~heESYNPP~EYL~~----~eE~~~we 318 (733)
T KOG0650|consen 243 SRMVHAIRKGWIKTDPREKEENYKFYDLWADDDTGEQLDRHLDLVPAPKLALPGHEESYNPPEEYLFD----EEEKKAWE 318 (733)
T ss_pred HHHHHHHHhccccCCccccccCccccceeccCCchhhhhcccccCCccccCCCCcccccCCchhhccC----HHHhhhhh
Confidence 445555555555441 223678887653333333222222222 3334566899999999998 44445566
Q ss_pred ccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhc
Q psy8748 1585 KDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSSINIYLKLQTAELKKELTQLIDKCKEEQAKQAD 1664 (2004)
Q Consensus 1585 v~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~ 1664 (2004)
-.. ...+...+.+..|..+-..|. |-+.-.+...+++.-.+ +...+.....
T Consensus 319 ~~E----------------------~~~R~l~F~P~ky~sLR~VPa-----Y~r~irErFeRcLDLYL--~PR~rK~rln 369 (733)
T KOG0650|consen 319 EAE----------------------PEDRKLNFIPQKYKSLRKVPA-----YERSIRERFERCLDLYL--APRVRKMRLN 369 (733)
T ss_pred hcc----------------------ccccccccccccchhhhcchh-----HHHHHHHHHHHhHHhhh--Ccccccceec
Confidence 333 122333333333322222221 22222222233222222 3445555666
Q ss_pred cccccccCCCCCCCccccc---ccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEE
Q psy8748 1665 TKLEDVTASMPDAPKVKLM---PKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVA 1741 (2004)
Q Consensus 1665 ~~~se~~~s~~~~~~lk~~---pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLa 1741 (2004)
.+.+.....++.+..+... +...++||++.|+||...|.|.+|++|+.||+|+||.+.+|++++++.. .+.|.|++
T Consensus 370 iDpe~LiPkLPsp~dLrPFPt~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~-d~~I~~va 448 (733)
T KOG0650|consen 370 IDPESLIPKLPSPKDLRPFPTRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQF-DSEIRSVA 448 (733)
T ss_pred CCHHHhcccCCChhhcCCCcceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEee-cceeEEEE
Confidence 7777788888877776544 4557899999999999999999999999999999999999999998874 45799999
Q ss_pred EecCCC--EEEEeecCCeEEEEEcCCCCC-----------------C--------------CcceEEEEEecCccceeee
Q psy8748 1742 FAQSGN--FVACGGMDNMCTVYDLNNRDS-----------------T--------------GAAKVIRELLGYEGFLSSC 1788 (2004)
Q Consensus 1742 fSPdg~--~LaSGS~DGtIrVWDl~t~~~-----------------~--------------~~~k~i~sl~gh~~~Vssv 1788 (2004)
|+|.++ .|+++- .+.+.+-+..-+.. . .....+.....|...|..+
T Consensus 449 w~P~~~~~vLAvA~-~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~v 527 (733)
T KOG0650|consen 449 WNPLSDLCVLAVAV-GECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQV 527 (733)
T ss_pred ecCCCCceeEEEEe-cCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCcccee
Confidence 999765 334333 33344443221100 0 0011133445677888999
Q ss_pred EEe-CCCcEEEeec---CCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEec
Q psy8748 1789 RFI-DDTTLLTGSG---DMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFG 1864 (2004)
Q Consensus 1789 afs-dd~~LlSgS~---DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~ 1864 (2004)
.|+ .+.+|++... ...|.|+++...... .-+....+.|.++.|+|...+|++++. ..|+|||+.....++.+..
T Consensus 528 tWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ-~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~t 605 (733)
T KOG0650|consen 528 TWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQ-SPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLT 605 (733)
T ss_pred eeecCCceEEEeccCCCcceEEEEeccccccc-CchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhc
Confidence 998 4556666544 357889998766544 334456778999999999999998884 6899999998888877777
Q ss_pred CCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC----
Q psy8748 1865 HEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLL---- 1940 (2004)
Q Consensus 1865 h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~---- 1940 (2004)
....|..++.+|.|..++.|+.|+++..||+.-.....+.. ..|...++.++|++.-.++++|+.||++.||.-.
T Consensus 606 g~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~l-r~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~D 684 (733)
T KOG0650|consen 606 GSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTL-RLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYND 684 (733)
T ss_pred CCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHh-hhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehh
Confidence 77889999999999999999999999999998654433322 4566789999999999999999999999998532
Q ss_pred ---C--CeeeEEEccCCCC----eEEEEEcCCCCEEEEEECCCeEEEE
Q psy8748 1941 ---K--TTHNGVLSGHENR----VTSISLSPNGMALVTSSWDQFVKVW 1979 (2004)
Q Consensus 1941 ---t--ge~l~tL~gHs~~----VtsLaFSPDg~~LaSgS~DGtIrIW 1979 (2004)
+ --+++.+.+|... |.++.|+|...+|+++|.||+|++|
T Consensus 685 l~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 685 LLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred hhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 1 2356778888766 9999999999999999999999998
No 102
>KOG2096|consensus
Probab=99.88 E-value=9.4e-21 Score=215.48 Aligned_cols=296 Identities=21% Similarity=0.285 Sum_probs=217.8
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEE--E--eeCCCCceEEEEEecCCCEEE-EeecCCeEE
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQ--V--IPLRSAWVMSVAFAQSGNFVA-CGGMDNMCT 1759 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~--t--i~~Ht~~ItsLafSPdg~~La-SGS~DGtIr 1759 (2004)
...|+||.+.|++++|+.||++|||++.|++|++|++++..... . ....-+.-+.+.|.||-+-++ .+.....++
T Consensus 79 ~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~ 158 (420)
T KOG2096|consen 79 VSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLC 158 (420)
T ss_pred hhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEE
Confidence 45799999999999999999999999999999999988743211 1 111223567889999977554 445556899
Q ss_pred EEEcCCCCCCCcc-e--EEE---EEecCccceeeeEEeC-CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEE
Q psy8748 1760 VYDLNNRDSTGAA-K--VIR---ELLGYEGFLSSCRFID-DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISL 1832 (2004)
Q Consensus 1760 VWDl~t~~~~~~~-k--~i~---sl~gh~~~Vssvafsd-d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLaf 1832 (2004)
+|.+......... . ... -...|.-.+..+-..+ ..++++++.|..|.+|+++ |+.+..+ ......-+..++
T Consensus 159 vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~i-dtnq~~n~~aav 236 (420)
T KOG2096|consen 159 VYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSI-DTNQSSNYDAAV 236 (420)
T ss_pred EEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeee-ccccccccceee
Confidence 9988654321110 0 000 1112333333333333 3458889999999999998 7777555 344455667899
Q ss_pred CCCCCEEEEEECCCeEEEEECC---CC-----eEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCC------
Q psy8748 1833 SPDGQYFVTGSVDKSCKLWDFR---EK-----KCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRAD------ 1898 (2004)
Q Consensus 1833 SPdg~~LaSGS~DGsIrIWDlr---s~-----k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtg------ 1898 (2004)
+|+|+++++++-.-.|++|..- +| ..+..+.+|...|..++|+++...+++.+.||++++||++-.
T Consensus 237 SP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qD 316 (420)
T KOG2096|consen 237 SPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQD 316 (420)
T ss_pred CCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeeccceEecCCC
Confidence 9999999999999999999863 22 235567899999999999999999999999999999997521
Q ss_pred -ceeEEEc--CCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEE-ccCCCCeEEEEEcCCCCEEEEEECCC
Q psy8748 1899 -QQIATYL--PPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVL-SGHENRVTSISLSPNGMALVTSSWDQ 1974 (2004)
Q Consensus 1899 -k~i~t~~--~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL-~gHs~~VtsLaFSPDg~~LaSgS~DG 1974 (2004)
+.+.... .....+.-..+..+|+|+.|+.+. ...+++|..++|+....+ ..|...|++++|+++|+++++|| |.
T Consensus 317 pk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr 394 (420)
T KOG2096|consen 317 PKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DR 394 (420)
T ss_pred chHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeeec-ce
Confidence 1112211 112233455899999999988764 557999999998887776 46999999999999999999999 78
Q ss_pred eEEEEECCCC
Q psy8748 1975 FVKVWQESNT 1984 (2004)
Q Consensus 1975 tIrIWdlstg 1984 (2004)
.++++.-..|
T Consensus 395 ~vrv~~ntpg 404 (420)
T KOG2096|consen 395 YVRVIRNTPG 404 (420)
T ss_pred eeeeecCCCc
Confidence 8999874444
No 103
>KOG0310|consensus
Probab=99.87 E-value=1e-20 Score=225.74 Aligned_cols=237 Identities=21% Similarity=0.319 Sum_probs=206.1
Q ss_pred cccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecC-CCEEEEeecCCeEEEEEcCCCCCC
Q psy8748 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQS-GNFVACGGMDNMCTVYDLNNRDST 1769 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPd-g~~LaSGS~DGtIrVWDl~t~~~~ 1769 (2004)
-.+.|.++.|-.||+++|+|+..|.|+|||.++...++.+..|..+|..+.|+|+ +..+++|+.|+.+++||+.+.
T Consensus 67 Fk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a--- 143 (487)
T KOG0310|consen 67 FKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTA--- 143 (487)
T ss_pred hccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCc---
Confidence 4468999999999999999999999999998777788889999999999999995 457788999999999999864
Q ss_pred CcceEEEEEecCccceeeeEEeCC--CcEEEeecCCeEEEEECCCC-ceeEEeeccccCCeEEEEECCCCCEEEEEECCC
Q psy8748 1770 GAAKVIRELLGYEGFLSSCRFIDD--TTLLTGSGDMKIVTWNLETG-QRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDK 1846 (2004)
Q Consensus 1770 ~~~k~i~sl~gh~~~Vssvafsdd--~~LlSgS~DGtI~IWDl~tg-~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DG 1846 (2004)
.....+.+|.+.|.|..+++. ..+++|+.||.|++||.+.. ..+.. ..|..+|..+.+-|.|..+++++ ..
T Consensus 144 ---~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~e--lnhg~pVe~vl~lpsgs~iasAg-Gn 217 (487)
T KOG0310|consen 144 ---YVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVE--LNHGCPVESVLALPSGSLIASAG-GN 217 (487)
T ss_pred ---EEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEE--ecCCCceeeEEEcCCCCEEEEcC-CC
Confidence 246689999999999999965 45999999999999999987 44433 47899999999999999999887 46
Q ss_pred eEEEEECCCCe-EEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEE
Q psy8748 1847 SCKLWDFREKK-CVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYI 1925 (2004)
Q Consensus 1847 sIrIWDlrs~k-~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~L 1925 (2004)
.|++||+.+|. .+.....|...|+|+++..++..|++|+-||.|++||+.+.+.+..+.. .++|.+++.+|++..+
T Consensus 218 ~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~---~~pvLsiavs~dd~t~ 294 (487)
T KOG0310|consen 218 SVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKY---PGPVLSIAVSPDDQTV 294 (487)
T ss_pred eEEEEEecCCceehhhhhcccceEEEEEeecCCceEeecccccceEEEEccceEEEEeeec---ccceeeEEecCCCceE
Confidence 89999999554 4445555999999999999999999999999999999988888888744 3679999999999999
Q ss_pred EEEeCCCeEEEEEC
Q psy8748 1926 FCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1926 aSGSsDGsIrIWDL 1939 (2004)
++|..||.+.+-+.
T Consensus 295 viGmsnGlv~~rr~ 308 (487)
T KOG0310|consen 295 VIGMSNGLVSIRRR 308 (487)
T ss_pred EEecccceeeeehh
Confidence 99999998877644
No 104
>KOG1539|consensus
Probab=99.87 E-value=3e-20 Score=231.21 Aligned_cols=290 Identities=19% Similarity=0.307 Sum_probs=234.3
Q ss_pred ccccceeEEEEeCCCCEEEEEeCCCeEEEEECC--CC--ceEEEeeCCCCceEEEEEe-cCCCEEEEeecCCeEEEEEcC
Q psy8748 1690 GHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTW--TG--NKTQVIPLRSAWVMSVAFA-QSGNFVACGGMDNMCTVYDLN 1764 (2004)
Q Consensus 1690 GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~--Tg--k~l~ti~~Ht~~ItsLafS-Pdg~~LaSGS~DGtIrVWDl~ 1764 (2004)
.|.+.|....|-|....+++++.|+.+++|=.. +| +.++.-.+|..+..|+.|. .+|.++.+++.|++.+.+++.
T Consensus 286 ah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~ 365 (910)
T KOG1539|consen 286 AHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVI 365 (910)
T ss_pred cccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhh
Confidence 478899999999999999999999999988544 44 4566667899999999998 578899999999988777653
Q ss_pred CCCC---------------CCcc-------eEE-------------------------------------------EEEe
Q psy8748 1765 NRDS---------------TGAA-------KVI-------------------------------------------RELL 1779 (2004)
Q Consensus 1765 t~~~---------------~~~~-------k~i-------------------------------------------~sl~ 1779 (2004)
.... .... ..+ ..+.
T Consensus 366 ~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~ 445 (910)
T KOG1539|consen 366 SESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFK 445 (910)
T ss_pred HHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCcccc
Confidence 2100 0000 000 0000
Q ss_pred cCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEe--eccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1780 GYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEV--AQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREK 1856 (2004)
Q Consensus 1780 gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~i--l~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~ 1856 (2004)
.....+.+++.+ -++..+.|...|.|-+|++.+|-....+ ...|.++|++++.+.-++.+++++.+|.+++||....
T Consensus 446 ~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k 525 (910)
T KOG1539|consen 446 KDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKK 525 (910)
T ss_pred ccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCc
Confidence 112344555554 3566788899999999999999877555 3579999999999998999999999999999999988
Q ss_pred eEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q psy8748 1857 KCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHV 1936 (2004)
Q Consensus 1857 k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrI 1936 (2004)
..+..+. -...+.++..+.....++.+..|-.|+++|..+.+.++.+ .+|...|+.++|||||++|++++.|++|++
T Consensus 526 ~l~~~l~-l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f--~gh~nritd~~FS~DgrWlisasmD~tIr~ 602 (910)
T KOG1539|consen 526 VLKKSLR-LGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREF--WGHGNRITDMTFSPDGRWLISASMDSTIRT 602 (910)
T ss_pred ceeeeec-cCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHh--hccccceeeeEeCCCCcEEEEeecCCcEEE
Confidence 8776663 4677889999998889999999999999999998888888 466788999999999999999999999999
Q ss_pred EECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECC-CeEEEEECCC
Q psy8748 1937 WDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWD-QFVKVWQESN 1983 (2004)
Q Consensus 1937 WDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~D-GtIrIWdlst 1983 (2004)
||+.++.++..+. -..+.+++.|+|+|.+||+...| .-|++|.-..
T Consensus 603 wDlpt~~lID~~~-vd~~~~sls~SPngD~LAT~Hvd~~gIylWsNks 649 (910)
T KOG1539|consen 603 WDLPTGTLIDGLL-VDSPCTSLSFSPNGDFLATVHVDQNGIYLWSNKS 649 (910)
T ss_pred EeccCcceeeeEe-cCCcceeeEECCCCCEEEEEEecCceEEEEEchh
Confidence 9999999988775 46789999999999999999988 6799997554
No 105
>KOG0268|consensus
Probab=99.87 E-value=5.3e-22 Score=228.97 Aligned_cols=284 Identities=19% Similarity=0.282 Sum_probs=232.3
Q ss_pred CCCCCCeEEEEEccCC-CEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCC
Q psy8748 1552 EPCKEQRNAVSFHACS-TLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPT 1630 (2004)
Q Consensus 1552 e~Hk~~VtsVsFSPdG-k~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spd 1630 (2004)
.+|.++|.|++=+|.. ..+|| |+.||.|+|||+..+
T Consensus 63 ~gHrdGV~~lakhp~~ls~~aS-Gs~DG~VkiWnlsqR------------------------------------------ 99 (433)
T KOG0268|consen 63 DGHRDGVSCLAKHPNKLSTVAS-GSCDGEVKIWNLSQR------------------------------------------ 99 (433)
T ss_pred cccccccchhhcCcchhhhhhc-cccCceEEEEehhhh------------------------------------------
Confidence 5699999999999998 88999 999999999998771
Q ss_pred CcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEE
Q psy8748 1631 SSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSG 1710 (2004)
Q Consensus 1631 gSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASG 1710 (2004)
.+...++.|.+.|+.|++.. ..++++
T Consensus 100 ----------------------------------------------------~~~~~f~AH~G~V~Gi~v~~--~~~~tv 125 (433)
T KOG0268|consen 100 ----------------------------------------------------ECIRTFKAHEGLVRGICVTQ--TSFFTV 125 (433)
T ss_pred ----------------------------------------------------hhhheeecccCceeeEEecc--cceEEe
Confidence 02345678999999999986 679999
Q ss_pred eCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEE
Q psy8748 1711 SLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRF 1790 (2004)
Q Consensus 1711 S~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvaf 1790 (2004)
|.|.+|+.|.+.- ...+++.+ .+.+..+.-+..++.++++|. .|.|||.... .++..+.-..+.+.++.|
T Consensus 126 gdDKtvK~wk~~~-~p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~------~Pv~smswG~Dti~svkf 195 (433)
T KOG0268|consen 126 GDDKTVKQWKIDG-PPLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRD------NPVSSMSWGADSISSVKF 195 (433)
T ss_pred cCCcceeeeeccC-Ccceeeec-cccccccccccccccccccCc--eeeecccccC------CccceeecCCCceeEEec
Confidence 9999999998644 46666654 345777777777888888875 4999998643 445566667788899999
Q ss_pred eCC--CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC-eEEEEEecCCC
Q psy8748 1791 IDD--TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREK-KCVQTFFGHEA 1867 (2004)
Q Consensus 1791 sdd--~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~-k~I~tl~~h~s 1867 (2004)
++. +.|++++.|+.|.+||++++..+.++... ..-..|+|+|++-.|++|+.|..++.||++.. .++....+|.+
T Consensus 196 NpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~--mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvs 273 (433)
T KOG0268|consen 196 NPVETSILASCASDRSIVLYDLRQASPLKKVILT--MRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVS 273 (433)
T ss_pred CCCcchheeeeccCCceEEEecccCCccceeeee--ccccceecCccccceeeccccccceehhhhhhcccchhhcccce
Confidence 854 45778889999999999999988777433 34578999998889999999999999999864 45777889999
Q ss_pred CeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee
Q psy8748 1868 DVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHN 1945 (2004)
Q Consensus 1868 ~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l 1945 (2004)
.|.+++|+|.|+-|++||.|.+|+||..+.+.....+-. ..-..|.|+.|+.|.+|+++|++|+.|++|...-.+.+
T Consensus 274 AV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYht-kRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~Asekl 350 (433)
T KOG0268|consen 274 AVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHT-KRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKASEKL 350 (433)
T ss_pred eEEEeccCCCcchhccccccceEEEeecCCCcchhhhhH-hhhheeeEEEEeccccEEEecCCCcceeeeecchhhhc
Confidence 999999999999999999999999999987766544421 12245899999999999999999999999987554443
No 106
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.87 E-value=3e-19 Score=208.81 Aligned_cols=277 Identities=19% Similarity=0.215 Sum_probs=208.1
Q ss_pred CCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEE-EEeecCCeEEEEEcCCCCCCCcceEEEEEecCc
Q psy8748 1704 SRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFV-ACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYE 1782 (2004)
Q Consensus 1704 G~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~L-aSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~ 1782 (2004)
+..+++++.||.|++||..+++....+..+.. +.+++|+|+++.+ ++++.++.|++||..+++ ....+..+.
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~------~~~~~~~~~ 73 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGE------VIGTLPSGP 73 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCc------EEEeccCCC
Confidence 35688999999999999999998888886654 6789999999876 567788999999987643 223333332
Q ss_pred cceeeeEEeCCC-cEEE-eecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCC-eEEEEECCCCeEE
Q psy8748 1783 GFLSSCRFIDDT-TLLT-GSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDK-SCKLWDFREKKCV 1859 (2004)
Q Consensus 1783 ~~Vssvafsdd~-~LlS-gS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DG-sIrIWDlrs~k~I 1859 (2004)
. +..+.+++++ .+++ +..++.|++||+.+++.+..+. +...+.+++|+|+|+++++++.++ .+.+||.++++..
T Consensus 74 ~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~--~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~ 150 (300)
T TIGR03866 74 D-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIP--VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIV 150 (300)
T ss_pred C-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEee--CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEE
Confidence 2 3556676554 4544 4568999999999877664442 234468899999999999988775 4677899888766
Q ss_pred EEEecCCCCeEEEEEeCCCCEEEEEE-CCCeEEEEEccCCceeEEEcCCC-----CCCCeEEEEEcCCCCEEEEE-eCCC
Q psy8748 1860 QTFFGHEADVNSVCFHPSGLAFATGS-EDKTARLFDIRADQQIATYLPPN-----KNSGFTSCAVSSSGRYIFCG-SDDN 1932 (2004)
Q Consensus 1860 ~tl~~h~s~ItsIafSPdg~~LaSgS-~DGtIrIWDLrtgk~i~t~~~~~-----~~s~ItsLafSPdG~~LaSG-SsDG 1932 (2004)
..... ...+.+++|+|++.++++++ .+|.|++||+.+++....+.... .......++|+|+|++++++ +.++
T Consensus 151 ~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~ 229 (300)
T TIGR03866 151 DNVLV-DQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPAN 229 (300)
T ss_pred EEEEc-CCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCC
Confidence 55432 34567899999999886554 58999999999987766553211 11123568899999986554 4567
Q ss_pred eEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEE-ECCCeEEEEECCCCeEEEEEEe
Q psy8748 1933 NVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTS-SWDQFVKVWQESNTIVWKVLKV 1992 (2004)
Q Consensus 1933 sIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSg-S~DGtIrIWdlstg~l~k~Ik~ 1992 (2004)
.+.+||+.+++....+. +...+.+++|+|+|.+|+++ +.+|.|++||+.+++..+.++.
T Consensus 230 ~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~ 289 (300)
T TIGR03866 230 RVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKV 289 (300)
T ss_pred eEEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEc
Confidence 89999999888776553 45679999999999999886 5689999999999987676663
No 107
>KOG0301|consensus
Probab=99.87 E-value=1e-20 Score=232.06 Aligned_cols=237 Identities=22% Similarity=0.370 Sum_probs=203.1
Q ss_pred ccccccccceeE-EEEeC-CCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEc
Q psy8748 1686 KSLKGHINKVNS-VHYSG-DSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDL 1763 (2004)
Q Consensus 1686 ~sL~GHt~~Vts-LaFSP-DG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl 1763 (2004)
+.+.+|.+-|.+ ++|-+ ++..+++|+.|++|.+|..........+++|...|.++....++. +++|+.|.++++|..
T Consensus 51 ~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~~ 129 (745)
T KOG0301|consen 51 HAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWRI 129 (745)
T ss_pred eecccCcceeeccceeccccCcceEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEecc
Confidence 345567777777 88875 555799999999999999999999999999999999999887777 999999999999987
Q ss_pred CCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEE
Q psy8748 1764 NNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGS 1843 (2004)
Q Consensus 1764 ~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS 1843 (2004)
.. ....+.+|...|+.+...+.+.+++|+.|..|++|.- ++.+ +.+.+|.+.|..+++-+++ .|++++
T Consensus 130 ~~--------l~~~l~gH~asVWAv~~l~e~~~vTgsaDKtIklWk~--~~~l-~tf~gHtD~VRgL~vl~~~-~flScs 197 (745)
T KOG0301|consen 130 GE--------LVYSLQGHTASVWAVASLPENTYVTGSADKTIKLWKG--GTLL-KTFSGHTDCVRGLAVLDDS-HFLSCS 197 (745)
T ss_pred hh--------hhcccCCcchheeeeeecCCCcEEeccCcceeeeccC--Cchh-hhhccchhheeeeEEecCC-CeEeec
Confidence 53 3445899999999999999999999999999999986 3444 5567899999999999764 588999
Q ss_pred CCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCC
Q psy8748 1844 VDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGR 1923 (2004)
Q Consensus 1844 ~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~ 1923 (2004)
.||.|+.|++ +++++..+.+|..-|.++....++..++++++|++++||+.. .+...+..+. ..++++.+-++|+
T Consensus 198 NDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPt--tsiWsa~~L~NgD 272 (745)
T KOG0301|consen 198 NDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPT--TSIWSAKVLLNGD 272 (745)
T ss_pred CCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCc--cceEEEEEeeCCC
Confidence 9999999999 788899999999999999988888899999999999999976 6666664443 4688888888887
Q ss_pred EEEEEeCCCeEEEEECCC
Q psy8748 1924 YIFCGSDDNNVHVWDLLK 1941 (2004)
Q Consensus 1924 ~LaSGSsDGsIrIWDL~t 1941 (2004)
|++|+.||.||||....
T Consensus 273 -Ivvg~SDG~VrVfT~~k 289 (745)
T KOG0301|consen 273 -IVVGGSDGRVRVFTVDK 289 (745)
T ss_pred -EEEeccCceEEEEEecc
Confidence 66788999999998753
No 108
>PTZ00421 coronin; Provisional
Probab=99.87 E-value=6.1e-20 Score=232.80 Aligned_cols=254 Identities=16% Similarity=0.176 Sum_probs=194.0
Q ss_pred ceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCC-------CcceEEEEEecCccceeeeEEeC--CCcEEEeecCCeEE
Q psy8748 1736 WVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDST-------GAAKVIRELLGYEGFLSSCRFID--DTTLLTGSGDMKIV 1806 (2004)
Q Consensus 1736 ~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~-------~~~k~i~sl~gh~~~Vssvafsd--d~~LlSgS~DGtI~ 1806 (2004)
.|.....++++..+++++.+.....|+...+... ........+.+|.+.|.++.|++ +..+++|+.||.|+
T Consensus 22 ~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIk 101 (493)
T PTZ00421 22 NVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIM 101 (493)
T ss_pred ccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEE
Confidence 3444455556666666666666666665432100 00011234678999999999986 45799999999999
Q ss_pred EEECCCCce------eEEeeccccCCeEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCC
Q psy8748 1807 TWNLETGQR------IHEVAQAHIGDVVSISLSPDG-QYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGL 1879 (2004)
Q Consensus 1807 IWDl~tg~~------i~~il~~h~~~ItsLafSPdg-~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~ 1879 (2004)
+||+.++.. ....+.+|...|.+++|+|++ ++|++|+.||.|++||+++++.+..+.+|...|.+++|+|+|.
T Consensus 102 IWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~ 181 (493)
T PTZ00421 102 GWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGS 181 (493)
T ss_pred EEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCC
Confidence 999976531 123457899999999999975 6999999999999999999999999999999999999999999
Q ss_pred EEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEe----CCCeEEEEECCCCe-eeEEEccC-CC
Q psy8748 1880 AFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGS----DDNNVHVWDLLKTT-HNGVLSGH-EN 1953 (2004)
Q Consensus 1880 ~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGS----sDGsIrIWDL~tge-~l~tL~gH-s~ 1953 (2004)
+|++++.||+|++||+++++.+..+..+.. .....+.|.+++..+++++ .|+.|++||+++.. +......+ ..
T Consensus 182 lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~-~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~ 260 (493)
T PTZ00421 182 LLCTTSKDKKLNIIDPRDGTIVSSVEAHAS-AKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSS 260 (493)
T ss_pred EEEEecCCCEEEEEECCCCcEEEEEecCCC-CcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCC
Confidence 999999999999999999988877643321 2345678899888777654 47899999998754 33333333 34
Q ss_pred CeEEEEEcCCCCEEEEEE-CCCeEEEEECCCCeEEEEE
Q psy8748 1954 RVTSISLSPNGMALVTSS-WDQFVKVWQESNTIVWKVL 1990 (2004)
Q Consensus 1954 ~VtsLaFSPDg~~LaSgS-~DGtIrIWdlstg~l~k~I 1990 (2004)
.+....|++++.+|++|| .||.|++|++.++......
T Consensus 261 ~~~~~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~ 298 (493)
T PTZ00421 261 ALFIPFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCS 298 (493)
T ss_pred ceEEEEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEe
Confidence 566678899999999988 4999999999998765544
No 109
>KOG0647|consensus
Probab=99.87 E-value=2.1e-20 Score=212.40 Aligned_cols=230 Identities=20% Similarity=0.258 Sum_probs=179.6
Q ss_pred cccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCC--EEEEeecCCeEEEEEcCCC
Q psy8748 1689 KGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGN--FVACGGMDNMCTVYDLNNR 1766 (2004)
Q Consensus 1689 ~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~--~LaSGS~DGtIrVWDl~t~ 1766 (2004)
..|.++|.+++|+.||..+++|+.|+.+++||+.++ ....+..|.++|.++.|-+... .|++|+.|.+|+.||.+..
T Consensus 69 ~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~ 147 (347)
T KOG0647|consen 69 QSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSS 147 (347)
T ss_pred hccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCC
Confidence 458899999999999999999999999999999999 5566788999999999988665 8999999999999999754
Q ss_pred CCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEe-eccccCCeEEEEECCCCCEEEEEECC
Q psy8748 1767 DSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEV-AQAHIGDVVSISLSPDGQYFVTGSVD 1845 (2004)
Q Consensus 1767 ~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~i-l~~h~~~ItsLafSPdg~~LaSGS~D 1845 (2004)
. .+.++. ....+.++.. ....+++++.++.|.+|+++.+....+. .....-.+.|++..++....+.|+-+
T Consensus 148 ~------pv~t~~-LPeRvYa~Dv-~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiE 219 (347)
T KOG0647|consen 148 N------PVATLQ-LPERVYAADV-LYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIE 219 (347)
T ss_pred C------eeeeee-ccceeeehhc-cCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeec
Confidence 2 111111 1222222221 2346888999999999999776543222 22344568899999988888999999
Q ss_pred CeEEEEECCCC--eEEEEEecCC---------CCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeE
Q psy8748 1846 KSCKLWDFREK--KCVQTFFGHE---------ADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFT 1914 (2004)
Q Consensus 1846 GsIrIWDlrs~--k~I~tl~~h~---------s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~It 1914 (2004)
|.+.|..+..+ +.-..++.|. ..|++|+|+|....|++++.||++.+||-.....+... +.+..+|+
T Consensus 220 Grv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s--~~~~qpIt 297 (347)
T KOG0647|consen 220 GRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTS--ETHPQPIT 297 (347)
T ss_pred ceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhcc--CcCCCccc
Confidence 99999988876 3334455554 25788999998889999999999999998766666554 45668899
Q ss_pred EEEEcCCCCEEEEEe
Q psy8748 1915 SCAVSSSGRYIFCGS 1929 (2004)
Q Consensus 1915 sLafSPdG~~LaSGS 1929 (2004)
+++|+.+|.+++.+.
T Consensus 298 cc~fn~~G~ifaYA~ 312 (347)
T KOG0647|consen 298 CCSFNRNGSIFAYAL 312 (347)
T ss_pred eeEecCCCCEEEEEe
Confidence 999999999888653
No 110
>KOG0647|consensus
Probab=99.86 E-value=1.7e-20 Score=213.10 Aligned_cols=269 Identities=16% Similarity=0.253 Sum_probs=217.3
Q ss_pred cccceeEEEEeC-CCCEEEEEeCCCeEEEEECCC-CceE-EEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCC
Q psy8748 1691 HINKVNSVHYSG-DSRHCVSGSLDGKLIIWDTWT-GNKT-QVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRD 1767 (2004)
Q Consensus 1691 Ht~~VtsLaFSP-DG~~LASGS~DGtIrVWDl~T-gk~l-~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~ 1767 (2004)
-.+.|.+++||| ...+++.|+.||+||+|+++. |... +....|.++|.+++|+.||..+++|+.|+.+++||+.+++
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q 105 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ 105 (347)
T ss_pred cccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC
Confidence 357899999999 555667899999999999987 3333 3345689999999999999999999999999999998653
Q ss_pred CCCcceEEEEEecCccceeeeEEeCCC---cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEEC
Q psy8748 1768 STGAAKVIRELLGYEGFLSSCRFIDDT---TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSV 1844 (2004)
Q Consensus 1768 ~~~~~k~i~sl~gh~~~Vssvafsdd~---~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~ 1844 (2004)
......|.+.+..+.|.++. .+++|+.|.+|+.||.+....+..+ ...+.+.++..- ...++++..
T Consensus 106 -------~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~--~LPeRvYa~Dv~--~pm~vVata 174 (347)
T KOG0647|consen 106 -------VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATL--QLPERVYAADVL--YPMAVVATA 174 (347)
T ss_pred -------eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeee--eccceeeehhcc--CceeEEEec
Confidence 45667799999999998543 4899999999999999988887665 345667776653 567889999
Q ss_pred CCeEEEEECCCCeEEEEE--ecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCcee--EEEcCCC-------CCCCe
Q psy8748 1845 DKSCKLWDFREKKCVQTF--FGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQI--ATYLPPN-------KNSGF 1913 (2004)
Q Consensus 1845 DGsIrIWDlrs~k~I~tl--~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i--~t~~~~~-------~~s~I 1913 (2004)
++.|.+|+++++...... ...+-.++|++..++....+.|+-+|.+.|..+..+... ..|..+. .-..|
T Consensus 175 ~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaV 254 (347)
T KOG0647|consen 175 ERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAV 254 (347)
T ss_pred CCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEe
Confidence 999999999766432211 123446899999999888899999999999999876332 2222111 12457
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEE
Q psy8748 1914 TSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTS 1970 (2004)
Q Consensus 1914 tsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSg 1970 (2004)
.+++|+|.-..|++++.||++.+||-.....++....|..+|++.+|+.+|.++|-+
T Consensus 255 Nsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA 311 (347)
T KOG0647|consen 255 NSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYA 311 (347)
T ss_pred cceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCEEEEE
Confidence 899999999999999999999999988888888888999999999999999988765
No 111
>KOG0264|consensus
Probab=99.86 E-value=1.7e-21 Score=231.31 Aligned_cols=252 Identities=17% Similarity=0.322 Sum_probs=206.0
Q ss_pred cccccceeEEEEeCCCC-EEEEEeCCCeEEEEECCCCce----------EEEeeCCCCceEEEEEecCC-CEEEEeecCC
Q psy8748 1689 KGHINKVNSVHYSGDSR-HCVSGSLDGKLIIWDTWTGNK----------TQVIPLRSAWVMSVAFAQSG-NFVACGGMDN 1756 (2004)
Q Consensus 1689 ~GHt~~VtsLaFSPDG~-~LASGS~DGtIrVWDl~Tgk~----------l~ti~~Ht~~ItsLafSPdg-~~LaSGS~DG 1756 (2004)
--|.+.|+.+.+-|... .+|+++..+.|.|||..+... -.++.+|...-++++|++.. -.+++|+.|+
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~ 200 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDH 200 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCC
Confidence 45999999999999555 677788899999999764321 12677888878899999854 5899999999
Q ss_pred eEEEEEcCCCCCC-CcceEEEEEecCccceeeeEEe--CCCcEEEeecCCeEEEEECCC-CceeEEeeccccCCeEEEEE
Q psy8748 1757 MCTVYDLNNRDST-GAAKVIRELLGYEGFLSSCRFI--DDTTLLTGSGDMKIVTWNLET-GQRIHEVAQAHIGDVVSISL 1832 (2004)
Q Consensus 1757 tIrVWDl~t~~~~-~~~k~i~sl~gh~~~Vssvafs--dd~~LlSgS~DGtI~IWDl~t-g~~i~~il~~h~~~ItsLaf 1832 (2004)
.|.+||+...... ........+.+|...|..++|. ....|.+++.|+.+.+||.++ .........+|.++|.|++|
T Consensus 201 ~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~f 280 (422)
T KOG0264|consen 201 TICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAF 280 (422)
T ss_pred cEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEe
Confidence 9999999875542 3355667788999999999998 456799999999999999996 23333556789999999999
Q ss_pred CC-CCCEEEEEECCCeEEEEECCCC-eEEEEEecCCCCeEEEEEeCC-CCEEEEEECCCeEEEEEccCCce---------
Q psy8748 1833 SP-DGQYFVTGSVDKSCKLWDFREK-KCVQTFFGHEADVNSVCFHPS-GLAFATGSEDKTARLFDIRADQQ--------- 1900 (2004)
Q Consensus 1833 SP-dg~~LaSGS~DGsIrIWDlrs~-k~I~tl~~h~s~ItsIafSPd-g~~LaSgS~DGtIrIWDLrtgk~--------- 1900 (2004)
+| ++..||+|+.|++|++||+|+. +++.++.+|...|.++.|+|. ...+++++.|+.+.+||+..-..
T Consensus 281 np~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~d 360 (422)
T KOG0264|consen 281 NPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAED 360 (422)
T ss_pred CCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhcc
Confidence 99 6678899999999999999975 467889999999999999995 46788999999999999864222
Q ss_pred ---eEEEcCCCCCCCeEEEEEcCCCCE-EEEEeCCCeEEEEECC
Q psy8748 1901 ---IATYLPPNKNSGFTSCAVSSSGRY-IFCGSDDNNVHVWDLL 1940 (2004)
Q Consensus 1901 ---i~t~~~~~~~s~ItsLafSPdG~~-LaSGSsDGsIrIWDL~ 1940 (2004)
...|...+|...|..+.|+|+..+ |++.+.|+.+.||...
T Consensus 361 gppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 361 GPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 223666788889999999997765 5677889999999974
No 112
>KOG1274|consensus
Probab=99.85 E-value=9.3e-20 Score=229.33 Aligned_cols=278 Identities=19% Similarity=0.306 Sum_probs=227.2
Q ss_pred cccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCC-ceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCC
Q psy8748 1689 KGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTG-NKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRD 1767 (2004)
Q Consensus 1689 ~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tg-k~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~ 1767 (2004)
.+|+++-+.++|.|+|.+|++++.||.|++|+.... +....+..+...|.+++.. ++.|++|+.+++|.+|.+..++
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~~ 87 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFPSGE 87 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeec--ccceEEeeccceEEEeeCCCCC
Confidence 469999999999999999999999999999987665 5555555577777777654 6799999999999999998764
Q ss_pred CCCcceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCC
Q psy8748 1768 STGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDK 1846 (2004)
Q Consensus 1768 ~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DG 1846 (2004)
.. ..+....-.+.+++++ ++..+++|+.|-.|++.+..+.... ..+.+|.++|.++.|+|++++|++.+.||
T Consensus 88 ~~------~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~-~~lrgh~apVl~l~~~p~~~fLAvss~dG 160 (933)
T KOG1274|consen 88 ED------TILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQE-KVLRGHDAPVLQLSYDPKGNFLAVSSCDG 160 (933)
T ss_pred cc------ceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchh-eeecccCCceeeeeEcCCCCEEEEEecCc
Confidence 21 1223345577888888 4567888999999999999887766 45689999999999999999999999999
Q ss_pred eEEEEECCCCeEEEEEecC--------CCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEE
Q psy8748 1847 SCKLWDFREKKCVQTFFGH--------EADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAV 1918 (2004)
Q Consensus 1847 sIrIWDlrs~k~I~tl~~h--------~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLaf 1918 (2004)
.|++||+.++....++.+- ...+..++|+|+|..+++.+.|+.|++|+..++.....+....+...+.++.|
T Consensus 161 ~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~w 240 (933)
T KOG1274|consen 161 KVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQW 240 (933)
T ss_pred eEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEE
Confidence 9999999988776665421 34567789999988888888999999999999999888877777677999999
Q ss_pred cCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEE
Q psy8748 1919 SSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVW 1979 (2004)
Q Consensus 1919 SPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIW 1979 (2004)
+|+|.|||+++.||.|.|||+.+.+. ......|++++|.|+++.+-.-..-|...+|
T Consensus 241 sPnG~YiAAs~~~g~I~vWnv~t~~~----~~~~~~Vc~~aw~p~~n~it~~~~~g~~~~~ 297 (933)
T KOG1274|consen 241 SPNGKYIAASTLDGQILVWNVDTHER----HEFKRAVCCEAWKPNANAITLITALGTLGVS 297 (933)
T ss_pred cCCCcEEeeeccCCcEEEEecccchh----ccccceeEEEecCCCCCeeEEEeeccccccC
Confidence 99999999999999999999987222 2234679999999998876555555544444
No 113
>KOG0277|consensus
Probab=99.85 E-value=2.1e-20 Score=208.18 Aligned_cols=255 Identities=24% Similarity=0.360 Sum_probs=202.7
Q ss_pred EEEEEecC-CCEEEEee-------cCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC--CCcEEEeecCCeEEE
Q psy8748 1738 MSVAFAQS-GNFVACGG-------MDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID--DTTLLTGSGDMKIVT 1807 (2004)
Q Consensus 1738 tsLafSPd-g~~LaSGS-------~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd--d~~LlSgS~DGtI~I 1807 (2004)
+++.|+|- .++|+++. ..|.+.|.++.... .... .....-.+.+..++|+. .+.+++++.||.+++
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~---gi~e-~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl 87 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPK---GIQE-CQSYDTEDGLFDVAWSENHENQVIAASGDGSLRL 87 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCC---CeEE-EEeeecccceeEeeecCCCcceEEEEecCceEEE
Confidence 67889983 34444432 35889999886332 1122 22233456778888884 467999999999999
Q ss_pred EECCCCceeEEeeccccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeC-CCCEEEEEE
Q psy8748 1808 WNLETGQRIHEVAQAHIGDVVSISLSP-DGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHP-SGLAFATGS 1885 (2004)
Q Consensus 1808 WDl~tg~~i~~il~~h~~~ItsLafSP-dg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSP-dg~~LaSgS 1885 (2004)
||..........++.|...|.++.|++ .+..+++++.||+|++||...++.+.++.+|...|....|+| .++.+++++
T Consensus 88 ~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~S 167 (311)
T KOG0277|consen 88 FDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASAS 167 (311)
T ss_pred eccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEcc
Confidence 997766655566789999999999998 556788899999999999999999999999999999999999 678999999
Q ss_pred CCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCC-eeeEEEccCCCCeEEEEEcCC
Q psy8748 1886 EDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSS-SGRYIFCGSDDNNVHVWDLLKT-THNGVLSGHENRVTSISLSPN 1963 (2004)
Q Consensus 1886 ~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSP-dG~~LaSGSsDGsIrIWDL~tg-e~l~tL~gHs~~VtsLaFSPD 1963 (2004)
.||++++||++.......+ +.|...+.++.|+. +.+.+++|+.|+.|++||+++. .++..+.+|.-.|..+.|||.
T Consensus 168 gd~~l~lwdvr~~gk~~~i--~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph 245 (311)
T KOG0277|consen 168 GDGTLRLWDVRSPGKFMSI--EAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPH 245 (311)
T ss_pred CCceEEEEEecCCCceeEE--EeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcc
Confidence 9999999999865444444 45667899999998 6778999999999999999875 467888999999999999995
Q ss_pred -CCEEEEEECCCeEEEEECCCCeEEEEEEeecCCCCcc
Q psy8748 1964 -GMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTI 2000 (2004)
Q Consensus 1964 -g~~LaSgS~DGtIrIWdlstg~l~k~Ik~~~~h~~~V 2000 (2004)
...|++++.|-++||||...+. ..+.+++.|..=|
T Consensus 246 ~~~lLaSasYDmT~riw~~~~~d--s~~e~~~~HtEFv 281 (311)
T KOG0277|consen 246 HASLLASASYDMTVRIWDPERQD--SAIETVDHHTEFV 281 (311)
T ss_pred hhhHhhhccccceEEecccccch--hhhhhhhccceEE
Confidence 5679999999999999998543 3344444454433
No 114
>KOG0305|consensus
Probab=99.85 E-value=1.4e-19 Score=223.67 Aligned_cols=240 Identities=20% Similarity=0.329 Sum_probs=209.4
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeC-CCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCC
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPL-RSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTG 1770 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~-Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~ 1770 (2004)
.+.|+++.|+++|++|++|..+|.|.|||..+.+.+..+.+ |...|-+++|. +..+.+|+.+|.|..+|++..+.
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~-- 292 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQH-- 292 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchh--
Confidence 57899999999999999999999999999999999999998 99999999998 88999999999999999987542
Q ss_pred cceEEEEEecCccceeeeEEeC-CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC-CCCEEEEEE--CCC
Q psy8748 1771 AAKVIRELLGYEGFLSSCRFID-DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP-DGQYFVTGS--VDK 1846 (2004)
Q Consensus 1771 ~~k~i~sl~gh~~~Vssvafsd-d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP-dg~~LaSGS--~DG 1846 (2004)
....+.+|...|..+.|+. +.++++|+.|+.+.|||........ .+..|...|.+++|+| ....||+|+ .|+
T Consensus 293 ---~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~-~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~ 368 (484)
T KOG0305|consen 293 ---VVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKF-TFTEHTAAVKALAWCPWQSGLLATGGGSADR 368 (484)
T ss_pred ---hhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccE-EEeccceeeeEeeeCCCccCceEEcCCCccc
Confidence 2223788999999999995 5569999999999999996666654 4478999999999999 667888875 689
Q ss_pred eEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEE--ECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCE
Q psy8748 1847 SCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATG--SEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRY 1924 (2004)
Q Consensus 1847 sIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSg--S~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~ 1924 (2004)
.|++||..++..+..+. ....|.++.|++..+-|+++ ..++.|.||+..+.+.+..+ .+|...|..++++|||..
T Consensus 369 ~i~fwn~~~g~~i~~vd-tgsQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l--~gH~~RVl~la~SPdg~~ 445 (484)
T KOG0305|consen 369 CIKFWNTNTGARIDSVD-TGSQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAEL--LGHTSRVLYLALSPDGET 445 (484)
T ss_pred EEEEEEcCCCcEecccc-cCCceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeee--cCCcceeEEEEECCCCCE
Confidence 99999999999888774 46789999999988776664 45678999999998888777 467788999999999999
Q ss_pred EEEEeCCCeEEEEECCCC
Q psy8748 1925 IFCGSDDNNVHVWDLLKT 1942 (2004)
Q Consensus 1925 LaSGSsDGsIrIWDL~tg 1942 (2004)
+++|+.|.++++|++-..
T Consensus 446 i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 446 IVTGAADETLRFWNLFDE 463 (484)
T ss_pred EEEecccCcEEeccccCC
Confidence 999999999999998654
No 115
>KOG0650|consensus
Probab=99.85 E-value=8.5e-21 Score=228.94 Aligned_cols=343 Identities=18% Similarity=0.208 Sum_probs=246.8
Q ss_pred cccccccCCCCC-CccCCCCCCCCCCCCCCCCCCCCC---CCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCccccc
Q psy8748 1517 VLKKRWRKPRTP-NNYNVQGDASNPADTADIPTNAPE---PCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLL 1592 (2004)
Q Consensus 1517 ~L~~r~~k~~~~-~~yni~p~~~~~~ds~~~pt~a~e---~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~ 1592 (2004)
-|++|.++...+ ++.++.|.++++.++.++|+...- +|++.|+|++.+|.|.|||+ |+.||+||||++.+
T Consensus 358 YL~PR~rK~rlniDpe~LiPkLPsp~dLrPFPt~~~lvyrGHtg~Vr~iSvdp~G~wlas-GsdDGtvriWEi~T----- 431 (733)
T KOG0650|consen 358 YLAPRVRKMRLNIDPESLIPKLPSPKDLRPFPTRCALVYRGHTGLVRSISVDPSGEWLAS-GSDDGTVRIWEIAT----- 431 (733)
T ss_pred hhCcccccceecCCHHHhcccCCChhhcCCCcceeeeeEeccCCeEEEEEecCCcceeee-cCCCCcEEEEEeec-----
Confidence 467777876655 778899999999999999987664 49999999999999999999 99999999999999
Q ss_pred chhhhcccceeeEeecccccccccccCccccccccCCCCcchhhhhHhHHH-------HH--HHHHHHHHHhHHHhhhhh
Q psy8748 1593 DPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSSINIYLKLQTAE-------LK--KELTQLIDKCKEEQAKQA 1663 (2004)
Q Consensus 1593 ~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgSidi~i~~~~~q-------l~--k~i~ql~s~l~~~~~~~~ 1663 (2004)
++|++++.... .++.++|.|.+.+.+.+..-... .. .+.....+.+... .
T Consensus 432 --------gRcvr~~~~d~---------~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~~e~~~t~ell~~~----~ 490 (733)
T KOG0650|consen 432 --------GRCVRTVQFDS---------EIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGDRLEVGPTKELLASA----P 490 (733)
T ss_pred --------ceEEEEEeecc---------eeEEEEecCCCCceeEEEEecCceEEeCccccchhhhcchhhhhhcC----C
Confidence 99998886522 12233444444222221111000 00 0000000000000 0
Q ss_pred ccccccccCCCCCCCc--ccccccccccccccceeEEEEeCCCCEEEEEeCC---CeEEEEECCCCceEEEeeCCCCceE
Q psy8748 1664 DTKLEDVTASMPDAPK--VKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLD---GKLIIWDTWTGNKTQVIPLRSAWVM 1738 (2004)
Q Consensus 1664 ~~~~se~~~s~~~~~~--lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~D---GtIrVWDl~Tgk~l~ti~~Ht~~It 1738 (2004)
................ -.-.-++..-.|...|+.+.|+..|.||++...+ ..|.|+++..+.....|....+.|.
T Consensus 491 ~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq 570 (733)
T KOG0650|consen 491 NESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQ 570 (733)
T ss_pred CccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCcee
Confidence 0000000000000000 0001133445689999999999999999987654 5699999988877777777788899
Q ss_pred EEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC-CCcEEEeecCCeEEEEECCCCceeE
Q psy8748 1739 SVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID-DTTLLTGSGDMKIVTWNLETGQRIH 1817 (2004)
Q Consensus 1739 sLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd-d~~LlSgS~DGtI~IWDl~tg~~i~ 1817 (2004)
++.|+|...++++++.. .|++||+... ...+.+......+..++.++ +..++.|+.|+.++.+|+.-+....
T Consensus 571 ~v~FHPs~p~lfVaTq~-~vRiYdL~kq------elvKkL~tg~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPy 643 (733)
T KOG0650|consen 571 RVKFHPSKPYLFVATQR-SVRIYDLSKQ------ELVKKLLTGSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPY 643 (733)
T ss_pred EEEecCCCceEEEEecc-ceEEEehhHH------HHHHHHhcCCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchh
Confidence 99999999999888764 5999999753 33444555566778888875 5679999999999999999887776
Q ss_pred EeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECC------CC---eEEEEEecCCCC----eEEEEEeCCCCEEEEE
Q psy8748 1818 EVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFR------EK---KCVQTFFGHEAD----VNSVCFHPSGLAFATG 1884 (2004)
Q Consensus 1818 ~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlr------s~---k~I~tl~~h~s~----ItsIafSPdg~~LaSg 1884 (2004)
+....|...+++++||+.-.+|++|+.||++.|+.-. .. -+++.+.+|... |....|+|...+++++
T Consensus 644 k~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsA 723 (733)
T KOG0650|consen 644 KTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSA 723 (733)
T ss_pred HHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEec
Confidence 7778899999999999999999999999999998532 11 246677788655 8899999999999999
Q ss_pred ECCCeEEEE
Q psy8748 1885 SEDKTARLF 1893 (2004)
Q Consensus 1885 S~DGtIrIW 1893 (2004)
+.||+|++|
T Consensus 724 GAd~tirlf 732 (733)
T KOG0650|consen 724 GADGTIRLF 732 (733)
T ss_pred CCCceEEee
Confidence 999999998
No 116
>KOG0264|consensus
Probab=99.85 E-value=9.7e-20 Score=216.59 Aligned_cols=251 Identities=24% Similarity=0.368 Sum_probs=205.5
Q ss_pred CCCCceEEEEEecCC-CEEEEeecCCeEEEEEcCCCCCCC----cceEEEEEecCccceeeeEEe--CCCcEEEeecCCe
Q psy8748 1732 LRSAWVMSVAFAQSG-NFVACGGMDNMCTVYDLNNRDSTG----AAKVIRELLGYEGFLSSCRFI--DDTTLLTGSGDMK 1804 (2004)
Q Consensus 1732 ~Ht~~ItsLafSPdg-~~LaSGS~DGtIrVWDl~t~~~~~----~~k~i~sl~gh~~~Vssvafs--dd~~LlSgS~DGt 1804 (2004)
.|.+.|+.+.+.|.. ..+++++..+.|.|||..+..... .......+.+|.+.-.++.|+ ....+++++.|+.
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~ 201 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHT 201 (422)
T ss_pred cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCc
Confidence 488999999999965 466777888999999997653322 234445778888877778887 4567999999999
Q ss_pred EEEEECCCCce------eEEeeccccCCeEEEEECC-CCCEEEEEECCCeEEEEECC--CCeEEEEEecCCCCeEEEEEe
Q psy8748 1805 IVTWNLETGQR------IHEVAQAHIGDVVSISLSP-DGQYFVTGSVDKSCKLWDFR--EKKCVQTFFGHEADVNSVCFH 1875 (2004)
Q Consensus 1805 I~IWDl~tg~~------i~~il~~h~~~ItsLafSP-dg~~LaSGS~DGsIrIWDlr--s~k~I~tl~~h~s~ItsIafS 1875 (2004)
|++||+..... ....+.+|...|..++|++ +...|++++.|+.+.|||+| +.++.....+|.++|+|++|+
T Consensus 202 i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fn 281 (422)
T KOG0264|consen 202 ICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFN 281 (422)
T ss_pred EEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeC
Confidence 99999975443 3455789999999999999 56688999999999999999 566677788999999999999
Q ss_pred C-CCCEEEEEECCCeEEEEEccCCce-eEEEcCCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEECCCC----------
Q psy8748 1876 P-SGLAFATGSEDKTARLFDIRADQQ-IATYLPPNKNSGFTSCAVSSS-GRYIFCGSDDNNVHVWDLLKT---------- 1942 (2004)
Q Consensus 1876 P-dg~~LaSgS~DGtIrIWDLrtgk~-i~t~~~~~~~s~ItsLafSPd-G~~LaSGSsDGsIrIWDL~tg---------- 1942 (2004)
| ++..|++|+.|++|.+||+|+.+. +.++ .+|...|.++.|+|. ...+++++.|+.+.|||+...
T Consensus 282 p~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~--e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~ 359 (422)
T KOG0264|consen 282 PFNEFILATGSADKTVALWDLRNLNKPLHTF--EGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAE 359 (422)
T ss_pred CCCCceEEeccCCCcEEEeechhcccCceec--cCCCcceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhc
Confidence 9 667789999999999999998655 3333 677889999999995 568888999999999999542
Q ss_pred ----eeeEEEccCCCCeEEEEEcCCCCE-EEEEECCCeEEEEECCCC
Q psy8748 1943 ----THNGVLSGHENRVTSISLSPNGMA-LVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1943 ----e~l~tL~gHs~~VtsLaFSPDg~~-LaSgS~DGtIrIWdlstg 1984 (2004)
+.+..-.||...|..+.|+|+..+ ++|.+.|+.+.||+....
T Consensus 360 dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s~~ 406 (422)
T KOG0264|consen 360 DGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMAEN 406 (422)
T ss_pred cCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecccc
Confidence 234566789999999999998776 677899999999998853
No 117
>KOG1036|consensus
Probab=99.85 E-value=2.2e-19 Score=205.27 Aligned_cols=268 Identities=19% Similarity=0.267 Sum_probs=217.9
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCc
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGA 1771 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~ 1771 (2004)
.+.|.++.|+|.++.|++++.||.+++||+........++ |..++.+++|.+ ...+++|+.||.|+.+|++++.
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~---- 86 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGN---- 86 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccC-CceEEEeccCceEEEEEecCCc----
Confidence 5789999999999999999999999999998875555554 889999999985 6788999999999999998753
Q ss_pred ceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEE
Q psy8748 1772 AKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKL 1850 (2004)
Q Consensus 1772 ~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrI 1850 (2004)
...+..|...+.|+.+. ..+.+++|++|+.|++||.+........ .....|.++... |+.|++|+.|..+.+
T Consensus 87 ---~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~--d~~kkVy~~~v~--g~~LvVg~~~r~v~i 159 (323)
T KOG1036|consen 87 ---EDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTF--DQGKKVYCMDVS--GNRLVVGTSDRKVLI 159 (323)
T ss_pred ---ceeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccc--ccCceEEEEecc--CCEEEEeecCceEEE
Confidence 34456788999999998 4567999999999999999875444333 334478888776 789999999999999
Q ss_pred EECCCCeEEEEE--ecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCC----ceeEEEcCCC-------CCCCeEEEE
Q psy8748 1851 WDFREKKCVQTF--FGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRAD----QQIATYLPPN-------KNSGFTSCA 1917 (2004)
Q Consensus 1851 WDlrs~k~I~tl--~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtg----k~i~t~~~~~-------~~s~ItsLa 1917 (2004)
||+++....... ...+..++|+++.|++.-+++++-||+|.+=.++.. +....|..+. ...+|.+++
T Consensus 160 yDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~ 239 (323)
T KOG1036|consen 160 YDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIA 239 (323)
T ss_pred EEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeE
Confidence 999976543322 234567899999998888999999999988766554 2222221111 124688999
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEEC
Q psy8748 1918 VSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSW 1972 (2004)
Q Consensus 1918 fSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~ 1972 (2004)
|+|-...+++|+.||.|.+||+.+.+.+..+......|..++|+.+|..||.++.
T Consensus 240 Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 240 FHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred eccccceEEecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence 9999999999999999999999999999988888888999999999999999864
No 118
>PTZ00420 coronin; Provisional
Probab=99.85 E-value=9.6e-19 Score=223.39 Aligned_cols=232 Identities=16% Similarity=0.258 Sum_probs=181.4
Q ss_pred eecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCC--CcEEEeecCCeEEEEECCCCce-------eEEeecc
Q psy8748 1752 GGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD--TTLLTGSGDMKIVTWNLETGQR-------IHEVAQA 1822 (2004)
Q Consensus 1752 GS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd--~~LlSgS~DGtI~IWDl~tg~~-------i~~il~~ 1822 (2004)
|+.+|.|++|+.... .....+.+|.+.|.++.|++. ..+++|+.||.|++||+.++.. ....+.+
T Consensus 50 GG~~gvI~L~~~~r~------~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~g 123 (568)
T PTZ00420 50 GGLIGAIRLENQMRK------PPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKG 123 (568)
T ss_pred CCceeEEEeeecCCC------ceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeec
Confidence 566788999987542 456778899999999999964 6799999999999999986432 1123568
Q ss_pred ccCCeEEEEECCCCCE-EEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCcee
Q psy8748 1823 HIGDVVSISLSPDGQY-FVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQI 1901 (2004)
Q Consensus 1823 h~~~ItsLafSPdg~~-LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i 1901 (2004)
|...|.+++|+|++.. +++++.||.|++||+++++.+..+. |...|.+++|+|+|.+|++++.|+.|++||+++++.+
T Consensus 124 H~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i 202 (568)
T PTZ00420 124 HKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIA 202 (568)
T ss_pred CCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEE
Confidence 9999999999998875 5688999999999999998777764 5678999999999999999999999999999999888
Q ss_pred EEEcCCCCCCCe-----EEEEEcCCCCEEEEEeCCC----eEEEEECCC-CeeeEEEc--cCCCCeEEEEEcCCCCEEEE
Q psy8748 1902 ATYLPPNKNSGF-----TSCAVSSSGRYIFCGSDDN----NVHVWDLLK-TTHNGVLS--GHENRVTSISLSPNGMALVT 1969 (2004)
Q Consensus 1902 ~t~~~~~~~s~I-----tsLafSPdG~~LaSGSsDG----sIrIWDL~t-ge~l~tL~--gHs~~VtsLaFSPDg~~LaS 1969 (2004)
..+.. |.+.+ ....|++++.+|++++.|+ +|++||+++ +.++..+. .+.+.+......++|.++++
T Consensus 203 ~tl~g--H~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~ls 280 (568)
T PTZ00420 203 SSFHI--HDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLI 280 (568)
T ss_pred EEEec--ccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEE
Confidence 77743 33332 2334568999999887764 799999985 55555543 23344444445567999999
Q ss_pred EECCCeEEEEECCCCeEEEEEEee
Q psy8748 1970 SSWDQFVKVWQESNTIVWKVLKVY 1993 (2004)
Q Consensus 1970 gS~DGtIrIWdlstg~l~k~Ik~~ 1993 (2004)
|+.|+.|++|++..+. ...+..+
T Consensus 281 GkGD~tIr~~e~~~~~-~~~l~~~ 303 (568)
T PTZ00420 281 GKGDGNCRYYQHSLGS-IRKVNEY 303 (568)
T ss_pred EECCCeEEEEEccCCc-EEeeccc
Confidence 9999999999998774 3334433
No 119
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.85 E-value=4.5e-18 Score=198.91 Aligned_cols=254 Identities=15% Similarity=0.139 Sum_probs=188.7
Q ss_pred eeEEEEeCCCCEE-EEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEe-ecCCeEEEEEcCCCCCCCcc
Q psy8748 1695 VNSVHYSGDSRHC-VSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACG-GMDNMCTVYDLNNRDSTGAA 1772 (2004)
Q Consensus 1695 VtsLaFSPDG~~L-ASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSG-S~DGtIrVWDl~t~~~~~~~ 1772 (2004)
+.+++|+|+++.+ ++++.++.|++||..+++....+..+.. +..++|+|+++.++++ +.++.+++||+.+.
T Consensus 33 ~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~------ 105 (300)
T TIGR03866 33 PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETR------ 105 (300)
T ss_pred CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCC------
Confidence 5679999999976 5677889999999999988877765544 5678999999977654 56899999999753
Q ss_pred eEEEEEecCccceeeeEEeCCCc-EEEeecCC-eEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEE-CCCeEE
Q psy8748 1773 KVIRELLGYEGFLSSCRFIDDTT-LLTGSGDM-KIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGS-VDKSCK 1849 (2004)
Q Consensus 1773 k~i~sl~gh~~~Vssvafsdd~~-LlSgS~DG-tI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS-~DGsIr 1849 (2004)
.....+. ....+..+.+.+++. ++++..++ .+.+||..+++...... ....+.+++|+++++++++++ .+|.|+
T Consensus 106 ~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~ 182 (300)
T TIGR03866 106 KVLAEIP-VGVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVL--VDQRPRFAEFTADGKELWVSSEIGGTVS 182 (300)
T ss_pred eEEeEee-CCCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEE--cCCCccEEEECCCCCEEEEEcCCCCEEE
Confidence 2233332 223356778876554 55565554 57788998877654442 233467899999999886554 589999
Q ss_pred EEECCCCeEEEEEecCC-------CCeEEEEEeCCCCEEEEE-ECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCC
Q psy8748 1850 LWDFREKKCVQTFFGHE-------ADVNSVCFHPSGLAFATG-SEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSS 1921 (2004)
Q Consensus 1850 IWDlrs~k~I~tl~~h~-------s~ItsIafSPdg~~LaSg-S~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPd 1921 (2004)
+||+++++.+..+..+. .....++|+|++++++++ +.++.+.+||.++++...... ....+.+++|+|+
T Consensus 183 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~~~~~~---~~~~~~~~~~~~~ 259 (300)
T TIGR03866 183 VIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEVLDYLL---VGQRVWQLAFTPD 259 (300)
T ss_pred EEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEE---eCCCcceEEECCC
Confidence 99999988776654221 123468899999986554 456789999999887765542 2246889999999
Q ss_pred CCEEEEEe-CCCeEEEEECCCCeeeEEEccCCCCeEEEEEcC
Q psy8748 1922 GRYIFCGS-DDNNVHVWDLLKTTHNGVLSGHENRVTSISLSP 1962 (2004)
Q Consensus 1922 G~~LaSGS-sDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSP 1962 (2004)
|++|++++ .+|.|++||+.+++++..+... ...++++++|
T Consensus 260 g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~~~ 300 (300)
T TIGR03866 260 EKYLLTTNGVSNDVSVIDVAALKVIKSIKVG-RLPWGVVVRP 300 (300)
T ss_pred CCEEEEEcCCCCeEEEEECCCCcEEEEEEcc-cccceeEeCC
Confidence 99998864 5899999999999999988754 5568888865
No 120
>KOG0289|consensus
Probab=99.84 E-value=1.3e-19 Score=212.96 Aligned_cols=259 Identities=22% Similarity=0.410 Sum_probs=224.4
Q ss_pred CceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCC-cEEEeecCCeEEEEECCCC
Q psy8748 1735 AWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLETG 1813 (2004)
Q Consensus 1735 ~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg 1813 (2004)
..+.++...+..+.+.+|+.|..+.++|...+ .....+.||...|+.+.++++. .+++++.|..|++|.....
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~------q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~ 293 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSN------QILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLS 293 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchh------hhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccc
Confidence 35788888888789999999999999998754 5677889999999999999665 4888999999999998776
Q ss_pred ceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEec--CCCCeEEEEEeCCCCEEEEEECCCeEE
Q psy8748 1814 QRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFG--HEADVNSVCFHPSGLAFATGSEDKTAR 1891 (2004)
Q Consensus 1814 ~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~--h~s~ItsIafSPdg~~LaSgS~DGtIr 1891 (2004)
... .....|..+|+.+..+|.|.||++++.||+..+.|++++..+..... ..-.+++.+|+|||..|.+|..||.|+
T Consensus 294 s~~-~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vk 372 (506)
T KOG0289|consen 294 SEP-TSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVK 372 (506)
T ss_pred cCc-cccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEE
Confidence 654 45678999999999999999999999999999999999988766543 334689999999999999999999999
Q ss_pred EEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccC-CCCeEEEEEcCCCCEEEEE
Q psy8748 1892 LFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGH-ENRVTSISLSPNGMALVTS 1970 (2004)
Q Consensus 1892 IWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gH-s~~VtsLaFSPDg~~LaSg 1970 (2004)
|||+.++.....| ++|.++|..++|+.+|.|++++++|+.|++||+++.+..+++.-. ..+|.++.|.+.|.+|+.+
T Consensus 373 iwdlks~~~~a~F--pght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~ 450 (506)
T KOG0289|consen 373 IWDLKSQTNVAKF--PGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIA 450 (506)
T ss_pred EEEcCCccccccC--CCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEee
Confidence 9999999888777 568899999999999999999999999999999999888877543 3479999999999999999
Q ss_pred ECCCeEEEEECCCCeEEEEEEeecCCCCccccc
Q psy8748 1971 SWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003 (2004)
Q Consensus 1971 S~DGtIrIWdlstg~l~k~Ik~~~~h~~~VtsV 2003 (2004)
|.|=+|++++-.+. .|..+..+..|.+-.++|
T Consensus 451 g~~l~Vy~~~k~~k-~W~~~~~~~~~sg~st~v 482 (506)
T KOG0289|consen 451 GSDLQVYICKKKTK-SWTEIKELADHSGLSTGV 482 (506)
T ss_pred cceeEEEEEecccc-cceeeehhhhccccccee
Confidence 98877777776554 599999888887655554
No 121
>KOG1063|consensus
Probab=99.84 E-value=3.9e-19 Score=218.08 Aligned_cols=342 Identities=18% Similarity=0.260 Sum_probs=266.1
Q ss_pred CCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCC
Q psy8748 1551 PEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPT 1630 (2004)
Q Consensus 1551 ~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spd 1630 (2004)
-.+|.+.|.++.|+|.|..|.+ ++.|.++.||.-.+ .. ..|.. ..
T Consensus 263 l~GHeDWV~sv~W~p~~~~LLS-ASaDksmiiW~pd~-------------~t--GiWv~-----------~v-------- 307 (764)
T KOG1063|consen 263 LMGHEDWVYSVWWHPEGLDLLS-ASADKSMIIWKPDE-------------NT--GIWVD-----------VV-------- 307 (764)
T ss_pred hcCcccceEEEEEccchhhhee-cccCcceEEEecCC-------------cc--ceEEE-----------EE--------
Confidence 3479999999999999998888 99999999999877 00 01100 00
Q ss_pred CcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEE
Q psy8748 1631 SSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSG 1710 (2004)
Q Consensus 1631 gSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASG 1710 (2004)
....+.|..++-.+.-|+|++..+++-
T Consensus 308 -----------------------------------------------------RlGe~gg~a~GF~g~lw~~n~~~ii~~ 334 (764)
T KOG1063|consen 308 -----------------------------------------------------RLGEVGGSAGGFWGGLWSPNSNVIIAH 334 (764)
T ss_pred -----------------------------------------------------EeecccccccceeeEEEcCCCCEEEEe
Confidence 011122455678899999999999999
Q ss_pred eCCCeEEEEECCCC---ceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceee
Q psy8748 1711 SLDGKLIIWDTWTG---NKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSS 1787 (2004)
Q Consensus 1711 S~DGtIrVWDl~Tg---k~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vss 1787 (2004)
|..|..++|..++. .....+.+|.+.|.+++|+|.|.++++++.|.+-+++---..+ .....+...+-|.....|
T Consensus 335 g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q--~~wHEiaRPQiHGyDl~c 412 (764)
T KOG1063|consen 335 GRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQ--QEWHEIARPQIHGYDLTC 412 (764)
T ss_pred cccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccc--cceeeeccccccccccee
Confidence 99999999983332 2334568999999999999999999999999999998765222 124445555668888999
Q ss_pred eEEeC-CCcEEEeecCCeEEEEECCC-------------------------------------------Cce----e---
Q psy8748 1788 CRFID-DTTLLTGSGDMKIVTWNLET-------------------------------------------GQR----I--- 1816 (2004)
Q Consensus 1788 vafsd-d~~LlSgS~DGtI~IWDl~t-------------------------------------------g~~----i--- 1816 (2004)
+.+.+ +..+++|.+...+++|+... |.. .
T Consensus 413 ~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~ 492 (764)
T KOG1063|consen 413 LSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETP 492 (764)
T ss_pred eehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecc
Confidence 99988 66688888888888886421 000 0
Q ss_pred -------------------------EEeeccccCCeEEEEECCCCCEEEEEECCC-----eEEEEECCCCeEEEEEecCC
Q psy8748 1817 -------------------------HEVAQAHIGDVVSISLSPDGQYFVTGSVDK-----SCKLWDFREKKCVQTFFGHE 1866 (2004)
Q Consensus 1817 -------------------------~~il~~h~~~ItsLafSPdg~~LaSGS~DG-----sIrIWDlrs~k~I~tl~~h~ 1866 (2004)
...+.+|...|.+++.+|+|+++++++... .|++|+..+...+..+.+|.
T Consensus 493 ~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~Hs 572 (764)
T KOG1063|consen 493 LAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHS 572 (764)
T ss_pred cccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccc
Confidence 001357888999999999999999988654 59999999998888999999
Q ss_pred CCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeE-EE-cCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC--
Q psy8748 1867 ADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIA-TY-LPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKT-- 1942 (2004)
Q Consensus 1867 s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~-t~-~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tg-- 1942 (2004)
-.|+.++|+|||++|++.+.|.++.+|....+.... .+ ....|..-|..+.|+|++.++++++.|.+|++|.....
T Consensus 573 LTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d 652 (764)
T KOG1063|consen 573 LTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDLRD 652 (764)
T ss_pred eEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEeccCchh
Confidence 999999999999999999999999999975432211 11 14567778999999999999999999999999998776
Q ss_pred eeeEE--EccCCCCeEEEEEcC-----CCCEEEEEECCCeEEEEECC
Q psy8748 1943 THNGV--LSGHENRVTSISLSP-----NGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1943 e~l~t--L~gHs~~VtsLaFSP-----Dg~~LaSgS~DGtIrIWdls 1982 (2004)
+.+.. ...+...|+.++|.| .+..++.|-..|.|.+|+..
T Consensus 653 ~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 653 KYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred hhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence 43333 345889999999976 23367888889999999966
No 122
>KOG2055|consensus
Probab=99.84 E-value=1.9e-19 Score=213.22 Aligned_cols=283 Identities=19% Similarity=0.278 Sum_probs=228.2
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECC--CCceEEEeeCCCCceEEEEEecCCC-EEEEeecCCeEEEEEcCCCCC
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTW--TGNKTQVIPLRSAWVMSVAFAQSGN-FVACGGMDNMCTVYDLNNRDS 1768 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~--Tgk~l~ti~~Ht~~ItsLafSPdg~-~LaSGS~DGtIrVWDl~t~~~ 1768 (2004)
.++|+++.|+|....+++||.||+++||.+. ....++.+.....+|.+.+|.|+|. .+++++.....+.||+.+.+
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak- 291 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAK- 291 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeeccccc-
Confidence 5789999999999999999999999999764 3456777777889999999999999 99999999999999998753
Q ss_pred CCcceEEEEEecCc-cceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCC
Q psy8748 1769 TGAAKVIRELLGYE-GFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDK 1846 (2004)
Q Consensus 1769 ~~~~k~i~sl~gh~-~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DG 1846 (2004)
...+....++. ..+.....+ +++.++..+..|.|.+....+++.+..+ .-.+.|..++|+.+++.|++++.+|
T Consensus 292 ---~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~--KieG~v~~~~fsSdsk~l~~~~~~G 366 (514)
T KOG2055|consen 292 ---VTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSF--KIEGVVSDFTFSSDSKELLASGGTG 366 (514)
T ss_pred ---cccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhhee--eeccEEeeEEEecCCcEEEEEcCCc
Confidence 22223333333 223333333 5667889999999999999999888666 4567899999999999999999999
Q ss_pred eEEEEECCCCeEEEEEecCCC-CeEEEEEeCCCCEEEEEECCCeEEEEEccCC------ceeEEEcCCCCCCCeEEEEEc
Q psy8748 1847 SCKLWDFREKKCVQTFFGHEA-DVNSVCFHPSGLAFATGSEDKTARLFDIRAD------QQIATYLPPNKNSGFTSCAVS 1919 (2004)
Q Consensus 1847 sIrIWDlrs~k~I~tl~~h~s-~ItsIafSPdg~~LaSgS~DGtIrIWDLrtg------k~i~t~~~~~~~s~ItsLafS 1919 (2004)
.|++||++...++..+....+ .-+++|.++++.+|++|+..|.|.|||.++. +++..+ .+-...|+++.|+
T Consensus 367 eV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~--dNLtt~Itsl~Fn 444 (514)
T KOG2055|consen 367 EVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTV--DNLTTAITSLQFN 444 (514)
T ss_pred eEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhh--hhhheeeeeeeeC
Confidence 999999999998888864332 3457788899999999999999999996532 222222 3445679999999
Q ss_pred CCCCEEEEEeC--CCeEEEEECCCCeeeEEEcc---CCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1920 SSGRYIFCGSD--DNNVHVWDLLKTTHNGVLSG---HENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1920 PdG~~LaSGSs--DGsIrIWDL~tge~l~tL~g---Hs~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
+|+.+||.++. +..+++-.+.+......+.. .-+.|+|++|+|.|.++|.|..+|.|.+|.+.
T Consensus 445 ~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 445 HDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred cchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 99999998875 56799999887776666543 33568999999999999999999999999874
No 123
>KOG0639|consensus
Probab=99.84 E-value=5e-20 Score=218.10 Aligned_cols=282 Identities=21% Similarity=0.320 Sum_probs=231.9
Q ss_pred cccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCc---eEEEee--CCCCceEEEEEecCCCEEEEeecCCeEEEEEc
Q psy8748 1689 KGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGN---KTQVIP--LRSAWVMSVAFAQSGNFVACGGMDNMCTVYDL 1763 (2004)
Q Consensus 1689 ~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk---~l~ti~--~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl 1763 (2004)
-.|..-|.++++|...++++|||. |.|+|||+.... .+..+. .....|+++...|||+.|++|+.-.++.|||+
T Consensus 416 L~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWDL 494 (705)
T KOG0639|consen 416 LAHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDL 494 (705)
T ss_pred hccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCccccccccCcccceeeeEecCCCceEEeccccceeeeeec
Confidence 358899999999999999999986 789999986542 222222 24578999999999999999999999999999
Q ss_pred CCCCCCCcceEEEEEecCccceeeeEEeCC-CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEE
Q psy8748 1764 NNRDSTGAAKVIRELLGYEGFLSSCRFIDD-TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTG 1842 (2004)
Q Consensus 1764 ~t~~~~~~~k~i~sl~gh~~~Vssvafsdd-~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSG 1842 (2004)
.... ..+...+......+..++.+++ +..++++.||.|.+||+.+...+ +.+.+|.+.+.||.++++|..|++|
T Consensus 495 AapT----prikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~V-rqfqGhtDGascIdis~dGtklWTG 569 (705)
T KOG0639|consen 495 AAPT----PRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLV-RQFQGHTDGASCIDISKDGTKLWTG 569 (705)
T ss_pred cCCC----cchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceee-ecccCCCCCceeEEecCCCceeecC
Confidence 7642 2233333333344555666655 45788999999999999987766 5568999999999999999999999
Q ss_pred ECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCC
Q psy8748 1843 SVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSG 1922 (2004)
Q Consensus 1843 S~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG 1922 (2004)
+-|++|+.||+++++.+... .....|.++.++|++.++++|-.++.+.+....... ++..+.|...|.++.|.+.|
T Consensus 570 GlDntvRcWDlregrqlqqh-dF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~---kyqlhlheScVLSlKFa~cG 645 (705)
T KOG0639|consen 570 GLDNTVRCWDLREGRQLQQH-DFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPE---KYQLHLHESCVLSLKFAYCG 645 (705)
T ss_pred CCccceeehhhhhhhhhhhh-hhhhhheecccCCCccceeeecccCcEEEEecCCcc---ceeecccccEEEEEEecccC
Confidence 99999999999998765543 335789999999999999999999999888865333 33346777889999999999
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Q psy8748 1923 RYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQE 1981 (2004)
Q Consensus 1923 ~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdl 1981 (2004)
+++++.+.|+-+..|...-|..+...+ ....|.++.++.|.++++||+.|....||.+
T Consensus 646 kwfvStGkDnlLnawrtPyGasiFqsk-E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 646 KWFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred ceeeecCchhhhhhccCccccceeecc-ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 999999999999999998888877765 4678999999999999999999988888865
No 124
>KOG0646|consensus
Probab=99.84 E-value=9.5e-20 Score=216.59 Aligned_cols=267 Identities=22% Similarity=0.349 Sum_probs=214.2
Q ss_pred CeEEEEECCCCceEEEeeCCC-CceEEEEEecCCCEEEEee-cCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe
Q psy8748 1714 GKLIIWDTWTGNKTQVIPLRS-AWVMSVAFAQSGNFVACGG-MDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI 1791 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~ti~~Ht-~~ItsLafSPdg~~LaSGS-~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs 1791 (2004)
.++.+||+.+|.....+++.. ..-.++..- .+.+++++. ....+.+|.+....... ...-..+.+.++..+
T Consensus 18 ~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~------q~~v~Pg~v~al~s~ 90 (476)
T KOG0646|consen 18 INCIVWDLRTGTSLLQYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVV------QYIVLPGPVHALASS 90 (476)
T ss_pred cceeEEecCCCceeEEecCcccccchhhhhh-chhheeeecccCccccccccCchhhhh------hhcccccceeeeecC
Confidence 569999999999999888652 222222211 235555554 44689999987543111 223345678888888
Q ss_pred CCCcEEEee-cCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECC---------CCeEEEE
Q psy8748 1792 DDTTLLTGS-GDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFR---------EKKCVQT 1861 (2004)
Q Consensus 1792 dd~~LlSgS-~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlr---------s~k~I~t 1861 (2004)
+.+.++.++ ..|.|++|.+.+|..+. ++.+|-..|+|+.|+-||.+|++|+.||.|.+|++. +.++...
T Consensus 91 n~G~~l~ag~i~g~lYlWelssG~LL~-v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~ 169 (476)
T KOG0646|consen 91 NLGYFLLAGTISGNLYLWELSSGILLN-VLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHI 169 (476)
T ss_pred CCceEEEeecccCcEEEEEeccccHHH-HHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceee
Confidence 777655555 99999999999999884 448999999999999999999999999999999763 3467888
Q ss_pred EecCCCCeEEEEEeCC--CCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1862 FFGHEADVNSVCFHPS--GLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1862 l~~h~s~ItsIafSPd--g~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
+..|.-+|+.+...+. ..+++++|.|.++++||+..+..+.++..+ ..+.+++.+|-++.+++|+.+|.|.+.++
T Consensus 170 f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp---~si~av~lDpae~~~yiGt~~G~I~~~~~ 246 (476)
T KOG0646|consen 170 FSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFP---SSIKAVALDPAERVVYIGTEEGKIFQNLL 246 (476)
T ss_pred eccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecC---CcceeEEEcccccEEEecCCcceEEeeeh
Confidence 9999999999988765 457999999999999999999998888554 56899999999999999999999999887
Q ss_pred CC----------------CeeeEEEccCCC--CeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEE
Q psy8748 1940 LK----------------TTHNGVLSGHEN--RVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLK 1991 (2004)
Q Consensus 1940 ~t----------------ge~l~tL~gHs~--~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik 1991 (2004)
.. +..+..+.||.+ .|+|++++-||..|++|+.||.|+|||+.+.++++.+.
T Consensus 247 ~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~ 316 (476)
T KOG0646|consen 247 FKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQ 316 (476)
T ss_pred hcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHh
Confidence 43 234556778988 99999999999999999999999999999986665555
No 125
>KOG1273|consensus
Probab=99.84 E-value=1.9e-19 Score=204.82 Aligned_cols=286 Identities=13% Similarity=0.261 Sum_probs=224.1
Q ss_pred eeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceE
Q psy8748 1695 VNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKV 1774 (2004)
Q Consensus 1695 VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~ 1774 (2004)
-.|+.|++.|.+||+|+.||.|.|||+.|....+.+.+|..+|++++|+++|+.|++++.|..|++||+..+. .
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs------~ 99 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGS------P 99 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCC------c
Confidence 7899999999999999999999999999999888999999999999999999999999999999999998763 2
Q ss_pred EEEEecCccceeeeEEeCC--CcEEEeecCCeEEEEECCCCceeEEeec-cc----cCCeEEEEECCCCCEEEEEECCCe
Q psy8748 1775 IRELLGYEGFLSSCRFIDD--TTLLTGSGDMKIVTWNLETGQRIHEVAQ-AH----IGDVVSISLSPDGQYFVTGSVDKS 1847 (2004)
Q Consensus 1775 i~sl~gh~~~Vssvafsdd--~~LlSgS~DGtI~IWDl~tg~~i~~il~-~h----~~~ItsLafSPdg~~LaSGS~DGs 1847 (2004)
.+. .....+|..+.|++. +.+++.-.+..-.+.++..+.. ..+. .. .....+..|++.|+++++|...|.
T Consensus 100 l~r-irf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h--~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGk 176 (405)
T KOG1273|consen 100 LKR-IRFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKH--SVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGK 176 (405)
T ss_pred eeE-EEccCccceeeeccccCCeEEEEEecCCcEEEEecCCce--eeccCCCccccccccccccccCCCCEEEEecCcce
Confidence 222 234678888888854 3455554444445555544222 1111 11 111233468899999999999999
Q ss_pred EEEEECCCCeEEEEEecCC-CCeEEEEEeCCCCEEEEEECCCeEEEEEccCCcee---------EEEcCCCCCCCeEEEE
Q psy8748 1848 CKLWDFREKKCVQTFFGHE-ADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQI---------ATYLPPNKNSGFTSCA 1917 (2004)
Q Consensus 1848 IrIWDlrs~k~I~tl~~h~-s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i---------~t~~~~~~~s~ItsLa 1917 (2004)
+.++|..+.+++..++-.. ..|..+.++..|+.|+..+.|..|+.|+++.-... .++..--....-.+++
T Consensus 177 llv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~cc 256 (405)
T KOG1273|consen 177 LLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKKCC 256 (405)
T ss_pred EEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhhee
Confidence 9999999999998887666 78999999999999999999999999998621111 1111111223456899
Q ss_pred EcCCCCEEEEEeCC-CeEEEEECCCCeeeEEEccCC-CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy8748 1918 VSSSGRYIFCGSDD-NNVHVWDLLKTTHNGVLSGHE-NRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVL 1990 (2004)
Q Consensus 1918 fSPdG~~LaSGSsD-GsIrIWDL~tge~l~tL~gHs-~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~I 1990 (2004)
|+.+|.|+++|+.. ..++||....|..++.+.|.. ....++.|+|-...+++- ..|.|+||.......|..+
T Consensus 257 fs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~~~enwsaf 330 (405)
T KOG1273|consen 257 FSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAVVQVENWSAF 330 (405)
T ss_pred ecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEEeecccchhhc
Confidence 99999999988753 569999999999999999877 568899999999888887 6899999998776666544
No 126
>KOG0294|consensus
Probab=99.83 E-value=6.1e-19 Score=201.52 Aligned_cols=265 Identities=17% Similarity=0.300 Sum_probs=215.3
Q ss_pred ccccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCC--EEEEeecCCe
Q psy8748 1680 VKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGN--FVACGGMDNM 1757 (2004)
Q Consensus 1680 lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~--~LaSGS~DGt 1757 (2004)
..+.+...+..|.+.|+++|.+ +.|+|+||.|-+|+|||..+...+..+-.|.+.|+++.|.+.-. .|++|+.||.
T Consensus 31 ~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~ 108 (362)
T KOG0294|consen 31 PTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGH 108 (362)
T ss_pred eeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCc
Confidence 4556788899999999999976 89999999999999999999999999999999999999998765 9999999999
Q ss_pred EEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCc-EEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCC
Q psy8748 1758 CTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTT-LLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDG 1836 (2004)
Q Consensus 1758 IrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~-LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg 1836 (2004)
|.+|+.. .+.....+.+|.+.|+.++.++.+. .++.+.|+.++.||+-+|+.-...... ...+.+.|+|.|
T Consensus 109 i~iw~~~------~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~--~~at~v~w~~~G 180 (362)
T KOG0294|consen 109 IIIWRVG------SWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK--NKATLVSWSPQG 180 (362)
T ss_pred EEEEEcC------CeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC--CcceeeEEcCCC
Confidence 9999986 4688899999999999999998776 567899999999999998865444323 334559999999
Q ss_pred CEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEE
Q psy8748 1837 QYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSC 1916 (2004)
Q Consensus 1837 ~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsL 1916 (2004)
.+|+.++.+ .|-||.+.+......+.. ...+.|+.|. ++..+++|+.|+.|.+||..+..+...+ ..|...|..+
T Consensus 181 d~F~v~~~~-~i~i~q~d~A~v~~~i~~-~~r~l~~~~l-~~~~L~vG~d~~~i~~~D~ds~~~~~~~--~AH~~RVK~i 255 (362)
T KOG0294|consen 181 DHFVVSGRN-KIDIYQLDNASVFREIEN-PKRILCATFL-DGSELLVGGDNEWISLKDTDSDTPLTEF--LAHENRVKDI 255 (362)
T ss_pred CEEEEEecc-EEEEEecccHhHhhhhhc-cccceeeeec-CCceEEEecCCceEEEeccCCCccceee--ecchhheeee
Confidence 999998865 699999887765554432 3456677665 5668999999999999999987777766 4666778887
Q ss_pred EE--cCCCCEEEEEeCCCeEEEEECCCC-----eeeEEEccCCCCeEEEEE
Q psy8748 1917 AV--SSSGRYIFCGSDDNNVHVWDLLKT-----THNGVLSGHENRVTSISL 1960 (2004)
Q Consensus 1917 af--SPdG~~LaSGSsDGsIrIWDL~tg-----e~l~tL~gHs~~VtsLaF 1960 (2004)
.+ .|++.+|++++.||.|+|||++.. +.+..+.. ..+++|+..
T Consensus 256 ~~~~~~~~~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n~-~~RltCl~~ 305 (362)
T KOG0294|consen 256 ASYTNPEHEYLVTASSDGFIKVWDIDMETKKRPTLLAELNT-NVRLTCLRV 305 (362)
T ss_pred EEEecCCceEEEEeccCceEEEEEccccccCCcceeEEeec-CCccceeee
Confidence 74 457889999999999999998655 23333332 455666654
No 127
>KOG2106|consensus
Probab=99.83 E-value=6.8e-18 Score=201.16 Aligned_cols=303 Identities=17% Similarity=0.229 Sum_probs=233.2
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCC----
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDS---- 1768 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~---- 1768 (2004)
.-|.|++|.++|+ ++||..+|.|.||+..+.+..+....|++.|.+++...+|..+- |+.|..|..||-+-...
T Consensus 247 k~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd~~y~k~r~~e 324 (626)
T KOG2106|consen 247 KFVLCVTFLENGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLS-GGKDRKIILWDDNYRKLRETE 324 (626)
T ss_pred eEEEEEEEcCCCC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEee-cCccceEEecccccccccccc
Confidence 4689999999997 88999999999999888787777779999999999998888766 99999999999321110
Q ss_pred ----CCcce--------------------------EEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeE
Q psy8748 1769 ----TGAAK--------------------------VIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIH 1817 (2004)
Q Consensus 1769 ----~~~~k--------------------------~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~ 1817 (2004)
.+..+ ......+|......++.. ..+.+++++.|+.+++|+ ..+...
T Consensus 325 lPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~w 402 (626)
T KOG2106|consen 325 LPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEW 402 (626)
T ss_pred CchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeE
Confidence 00000 011223444555555555 345799999999999999 334333
Q ss_pred EeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccC
Q psy8748 1818 EVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRA 1897 (2004)
Q Consensus 1818 ~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrt 1897 (2004)
.. ....++.|+.|+|.| .++.|+..|...+.|.++...+..-.. ..++++++|+|+|.+|++|+.|+.|++|.+..
T Consensus 403 t~--~~~d~~~~~~fhpsg-~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~ 478 (626)
T KOG2106|consen 403 TK--IIEDPAECADFHPSG-VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSA 478 (626)
T ss_pred EE--EecCceeEeeccCcc-eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECC
Confidence 32 345778999999999 999999999999999998665554444 89999999999999999999999999999987
Q ss_pred CceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEE--------------E----ccCCCCeEEEE
Q psy8748 1898 DQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGV--------------L----SGHENRVTSIS 1959 (2004)
Q Consensus 1898 gk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~t--------------L----~gHs~~VtsLa 1959 (2004)
+..........+...|+.+.|++|++++.+-+.|-.|..|.......... + ..|...|..++
T Consensus 479 ~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW~t~~c~lGF~v~g~s~~t~i~a~~ 558 (626)
T KOG2106|consen 479 NGRKYSRVGKCSGSPITHLDWSSDSQFLVSNSGDYEILYWKPSECKQITSVKDVKWATYTCTLGFEVFGGSDGTDINAVA 558 (626)
T ss_pred CCcEEEEeeeecCceeEEeeecCCCceEEeccCceEEEEEccccCcccceecceeeeeeEEEEEEEEecccCCchHHHhh
Confidence 66655555555558999999999999999999999999994322111111 1 13556677778
Q ss_pred EcCCCCEEEEEECCCeEEEEECCCCeEEEEEEeecCCCCccccc
Q psy8748 1960 LSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003 (2004)
Q Consensus 1960 FSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik~~~~h~~~VtsV 2003 (2004)
-+.+.+++++|.+.|+|++|...-...-...-.+..|.+.|+||
T Consensus 559 rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he~~ghs~~vt~V 602 (626)
T KOG2106|consen 559 RSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHEYGGHSSHVTNV 602 (626)
T ss_pred hhhhhhhhhccccCceEEEEccccCCCcccceeeccccceeEEE
Confidence 88889999999999999999987554445555667788888876
No 128
>KOG4283|consensus
Probab=99.83 E-value=4.2e-19 Score=200.46 Aligned_cols=283 Identities=19% Similarity=0.294 Sum_probs=217.7
Q ss_pred cccccceeEEEEeC-CCCEEEEEeCCCeEEEEECCCCce----------EE-----EeeCCCCceEEEEEec-CCCEEEE
Q psy8748 1689 KGHINKVNSVHYSG-DSRHCVSGSLDGKLIIWDTWTGNK----------TQ-----VIPLRSAWVMSVAFAQ-SGNFVAC 1751 (2004)
Q Consensus 1689 ~GHt~~VtsLaFSP-DG~~LASGS~DGtIrVWDl~Tgk~----------l~-----ti~~Ht~~ItsLafSP-dg~~LaS 1751 (2004)
+.|.+.|+++.+.+ .|+|+++|+.||.|.|||++.... .. .-.+|...|.++.|-| |...+.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 45899999999997 788999999999999999875431 11 1135788899999999 6668889
Q ss_pred eecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC----CCcEEEeecCCeEEEEECCCCceeEEeeccccCCe
Q psy8748 1752 GGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID----DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDV 1827 (2004)
Q Consensus 1752 GS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd----d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~I 1827 (2004)
++.|.+++|||.++.+... .....+.|..-++++ ...+++|+.+-.|++.|+.+|... ..+.+|.+.|
T Consensus 120 sSFDhtlKVWDtnTlQ~a~-------~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~s-H~LsGHr~~v 191 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQEAV-------DFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFS-HTLSGHRDGV 191 (397)
T ss_pred ccccceEEEeecccceeeE-------EeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcce-eeeccccCce
Confidence 9999999999998753211 122334444444442 234778888999999999999987 4558999999
Q ss_pred EEEEECCCCC-EEEEEECCCeEEEEECCCC-eEEEEE--------------ecCCCCeEEEEEeCCCCEEEEEECCCeEE
Q psy8748 1828 VSISLSPDGQ-YFVTGSVDKSCKLWDFREK-KCVQTF--------------FGHEADVNSVCFHPSGLAFATGSEDKTAR 1891 (2004)
Q Consensus 1828 tsLafSPdg~-~LaSGS~DGsIrIWDlrs~-k~I~tl--------------~~h~s~ItsIafSPdg~~LaSgS~DGtIr 1891 (2004)
.++.|+|... .|++|+.||.|++||++.. .+...+ ..|.+.+.+++|..++.++++++.|.+++
T Consensus 192 laV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r 271 (397)
T KOG4283|consen 192 LAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIR 271 (397)
T ss_pred EEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceE
Confidence 9999999776 5678999999999999854 223222 35778899999999999999999999999
Q ss_pred EEEccCCceeEEE-cCCCCC----CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCE
Q psy8748 1892 LFDIRADQQIATY-LPPNKN----SGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMA 1966 (2004)
Q Consensus 1892 IWDLrtgk~i~t~-~~~~~~----s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~ 1966 (2004)
+|+..+|+....- ....+. -.+. +. +-+...++---.++.+.++++-.+..+..+..|-..|.+.++-|+-..
T Consensus 272 ~wn~~~G~ntl~~~g~~~~n~~~~~~~~-~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~ 349 (397)
T KOG4283|consen 272 VWNMESGRNTLREFGPIIHNQTTSFAVH-IQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQ 349 (397)
T ss_pred EeecccCcccccccccccccccccceEE-Ee-ecccceEEEEecCCeEEEEEccCceEEEeeecccceeeEEeecCchhh
Confidence 9999887653222 111111 1111 22 223344444445689999999999999999999999999999999889
Q ss_pred EEEEECCCeEEEEEC
Q psy8748 1967 LVTSSWDQFVKVWQE 1981 (2004)
Q Consensus 1967 LaSgS~DGtIrIWdl 1981 (2004)
..+|..|+.|..|..
T Consensus 350 ~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 350 CFTGDMNGNIYMWSP 364 (397)
T ss_pred hhccccCCccccccc
Confidence 999999999999976
No 129
>KOG2048|consensus
Probab=99.83 E-value=3.8e-18 Score=209.79 Aligned_cols=241 Identities=17% Similarity=0.239 Sum_probs=199.9
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcc
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAA 1772 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~ 1772 (2004)
+.|.+++|+ ++..|.+.+.+|.|.-||+.+++....+....+.|.+++.+|.+..++.|+.||.+..++...+ ..
T Consensus 70 rsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~----~I 144 (691)
T KOG2048|consen 70 RSIESLAWA-EGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPD----KI 144 (691)
T ss_pred CceeeEEEc-cCCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCc----eE
Confidence 578899999 4556888889999999999999999999999999999999999999999999997777776543 33
Q ss_pred eEEEEEecCccceeeeEEeCCCc-EEEeecCCeEEEEECCCCceeEEee-------ccccCCeEEEEECCCCCEEEEEEC
Q psy8748 1773 KVIRELLGYEGFLSSCRFIDDTT-LLTGSGDMKIVTWNLETGQRIHEVA-------QAHIGDVVSISLSPDGQYFVTGSV 1844 (2004)
Q Consensus 1773 k~i~sl~gh~~~Vssvafsdd~~-LlSgS~DGtI~IWDl~tg~~i~~il-------~~h~~~ItsLafSPdg~~LaSGS~ 1844 (2004)
...+.+....+.+.++.|.++.. +++|+.||.|++||..+++..+... .....-|+++.|-.+ ..+++|..
T Consensus 145 ~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd-~tI~sgDS 223 (691)
T KOG2048|consen 145 TYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRD-STIASGDS 223 (691)
T ss_pred EEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeec-CcEEEecC
Confidence 44455556678999999997776 9999999999999999998775221 112334777887755 46899999
Q ss_pred CCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCce--eEEEcCCCCCCCeEEEEEcCCC
Q psy8748 1845 DKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQ--IATYLPPNKNSGFTSCAVSSSG 1922 (2004)
Q Consensus 1845 DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~--i~t~~~~~~~s~ItsLafSPdG 1922 (2004)
.|+|.+||...+..+..+..|...|.+++..++++++++++.|++|..|...+++. +.......|...+.+++..++
T Consensus 224 ~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~av~~~- 302 (691)
T KOG2048|consen 224 AGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSMAVIEN- 302 (691)
T ss_pred CceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceeeeeecc-
Confidence 99999999999999999999999999999999999999999999999998876644 222233456677899998876
Q ss_pred CEEEEEeCCCeEEEEECCC
Q psy8748 1923 RYIFCGSDDNNVHVWDLLK 1941 (2004)
Q Consensus 1923 ~~LaSGSsDGsIrIWDL~t 1941 (2004)
.+++|+.|+.+.+-..+.
T Consensus 303 -~l~sgG~d~~l~i~~s~~ 320 (691)
T KOG2048|consen 303 -ALISGGRDFTLAICSSRE 320 (691)
T ss_pred -eEEecceeeEEEEccccc
Confidence 899999999999877654
No 130
>KOG1274|consensus
Probab=99.83 E-value=1.3e-18 Score=219.17 Aligned_cols=246 Identities=19% Similarity=0.278 Sum_probs=207.3
Q ss_pred eCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEEC
Q psy8748 1731 PLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNL 1810 (2004)
Q Consensus 1731 ~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl 1810 (2004)
..|+..-+.++|.|+|.+|++++.||.|++|+..... .....+..+...+.+++.. .++|++|+.+++|..|.+
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~-----e~P~ti~~~g~~v~~ia~~-s~~f~~~s~~~tv~~y~f 83 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDE-----EEPETIDISGELVSSIACY-SNHFLTGSEQNTVLRYKF 83 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcc-----cCCchhhccCceeEEEeec-ccceEEeeccceEEEeeC
Confidence 3578889999999999999999999999999986542 1111122255566666554 448999999999999999
Q ss_pred CCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeE
Q psy8748 1811 ETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTA 1890 (2004)
Q Consensus 1811 ~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtI 1890 (2004)
.+++.- .++....-++.+++|+.+|++++.|+.|-.|++.+..+......+++|.++|.++.|+|++++|++.+.||.|
T Consensus 84 ps~~~~-~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v 162 (933)
T KOG1274|consen 84 PSGEED-TILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKV 162 (933)
T ss_pred CCCCcc-ceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceE
Confidence 887654 3445567789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEccCCceeEEEcCCCC------CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEcc--CCCCeEEEEEcC
Q psy8748 1891 RLFDIRADQQIATYLPPNK------NSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSG--HENRVTSISLSP 1962 (2004)
Q Consensus 1891 rIWDLrtgk~i~t~~~~~~------~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~g--Hs~~VtsLaFSP 1962 (2004)
++||+.++....++..-.. ...+..++|+|+|..+++...|+.|.+|+...++....+.. +...+.++.|+|
T Consensus 163 ~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsP 242 (933)
T KOG1274|consen 163 QIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSP 242 (933)
T ss_pred EEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcC
Confidence 9999998877655532111 34567899999988888888999999999999999988854 455599999999
Q ss_pred CCCEEEEEECCCeEEEEECCC
Q psy8748 1963 NGMALVTSSWDQFVKVWQESN 1983 (2004)
Q Consensus 1963 Dg~~LaSgS~DGtIrIWdlst 1983 (2004)
+|+|||+++.||.|.|||.++
T Consensus 243 nG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 243 NGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred CCcEEeeeccCCcEEEEeccc
Confidence 999999999999999999994
No 131
>KOG2055|consensus
Probab=99.82 E-value=1.4e-18 Score=206.02 Aligned_cols=291 Identities=20% Similarity=0.284 Sum_probs=228.2
Q ss_pred CCCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCC
Q psy8748 1550 APEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKP 1629 (2004)
Q Consensus 1550 a~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~sp 1629 (2004)
+..+-.++|++|.|||.-..|.+ ++.||+++|+.++. +. .+
T Consensus 208 a~~ps~~~I~sv~FHp~~plllv-aG~d~~lrifqvDG--------------------k~---------N~--------- 248 (514)
T KOG2055|consen 208 AAHPSHGGITSVQFHPTAPLLLV-AGLDGTLRIFQVDG--------------------KV---------NP--------- 248 (514)
T ss_pred cCCcCcCCceEEEecCCCceEEE-ecCCCcEEEEEecC--------------------cc---------Ch---------
Confidence 33444568999999999999999 99999999999977 00 00
Q ss_pred CCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCC-EEE
Q psy8748 1630 TSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSR-HCV 1708 (2004)
Q Consensus 1630 dgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~-~LA 1708 (2004)
.++.+.--..+|.+.+|.|+|. .++
T Consensus 249 ------------------------------------------------------~lqS~~l~~fPi~~a~f~p~G~~~i~ 274 (514)
T KOG2055|consen 249 ------------------------------------------------------KLQSIHLEKFPIQKAEFAPNGHSVIF 274 (514)
T ss_pred ------------------------------------------------------hheeeeeccCccceeeecCCCceEEE
Confidence 0112222346888999999999 899
Q ss_pred EEeCCCeEEEEECCCCceEEE--eeCCC-CceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccce
Q psy8748 1709 SGSLDGKLIIWDTWTGNKTQV--IPLRS-AWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFL 1785 (2004)
Q Consensus 1709 SGS~DGtIrVWDl~Tgk~l~t--i~~Ht-~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~V 1785 (2004)
++|....++.||+.+++.... ..++. ..+.....++++++|+..|..|.|.+....+++..... ...+.+
T Consensus 275 ~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~-------KieG~v 347 (514)
T KOG2055|consen 275 TSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSF-------KIEGVV 347 (514)
T ss_pred ecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhhee-------eeccEE
Confidence 999999999999988865443 33333 45777888999999999999999999988765432222 235677
Q ss_pred eeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECC------CCeE
Q psy8748 1786 SSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFR------EKKC 1858 (2004)
Q Consensus 1786 ssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlr------s~k~ 1858 (2004)
..+.|+ ++..+++++.+|.|++||++...++++......-.-++++.++++.+|++|+..|.|.|||.+ ..++
T Consensus 348 ~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkP 427 (514)
T KOG2055|consen 348 SDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKP 427 (514)
T ss_pred eeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCc
Confidence 788887 455688899999999999999988877765554456778888999999999999999999965 3456
Q ss_pred EEEEecCCCCeEEEEEeCCCCEEEEEEC--CCeEEEEEccCCceeEEEcCCC-CCCCeEEEEEcCCCCEEEEEeCCCeEE
Q psy8748 1859 VQTFFGHEADVNSVCFHPSGLAFATGSE--DKTARLFDIRADQQIATYLPPN-KNSGFTSCAVSSSGRYIFCGSDDNNVH 1935 (2004)
Q Consensus 1859 I~tl~~h~s~ItsIafSPdg~~LaSgS~--DGtIrIWDLrtgk~i~t~~~~~-~~s~ItsLafSPdG~~LaSGSsDGsIr 1935 (2004)
+..+......|+++.|++++..++.+|. +..+++-.+.+......+...+ .-+.++|++|+|.|.++|.|..+|.+.
T Consensus 428 ik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~ 507 (514)
T KOG2055|consen 428 IKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVH 507 (514)
T ss_pred hhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEeccceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCcee
Confidence 7777777788999999999999888775 5668888877665555553332 235689999999999999999999999
Q ss_pred EEECC
Q psy8748 1936 VWDLL 1940 (2004)
Q Consensus 1936 IWDL~ 1940 (2004)
+|.+.
T Consensus 508 l~kL~ 512 (514)
T KOG2055|consen 508 LFKLH 512 (514)
T ss_pred eEeec
Confidence 99864
No 132
>KOG1332|consensus
Probab=99.82 E-value=1.9e-19 Score=199.75 Aligned_cols=249 Identities=21% Similarity=0.246 Sum_probs=207.1
Q ss_pred cccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCC---ceEEEeeCCCCceEEEEEec--CCCEEEEeecCCeEEEE
Q psy8748 1687 SLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTG---NKTQVIPLRSAWVMSVAFAQ--SGNFVACGGMDNMCTVY 1761 (2004)
Q Consensus 1687 sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tg---k~l~ti~~Ht~~ItsLafSP--dg~~LaSGS~DGtIrVW 1761 (2004)
.-.+|.+.|.++...--|+.|||++.|++|+|+..... +.+.++.+|.++|..++|.. .|.+|++++.||.|.||
T Consensus 6 idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiW 85 (299)
T KOG1332|consen 6 IDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIW 85 (299)
T ss_pred hhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEE
Confidence 34579999999998888999999999999999998764 45778899999999999965 79999999999999999
Q ss_pred EcCCCCCCCcceEEEEEecCccceeeeEEeCCCc---EEEeecCCeEEEEECCCC--ceeEEeeccccCCeEEEEECCC-
Q psy8748 1762 DLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTT---LLTGSGDMKIVTWNLETG--QRIHEVAQAHIGDVVSISLSPD- 1835 (2004)
Q Consensus 1762 Dl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~---LlSgS~DGtI~IWDl~tg--~~i~~il~~h~~~ItsLafSPd- 1835 (2004)
.-.++ ..........|...+.+++|.+..+ |++++.||.|.+.+.+.. ....++...|...|++++|.|.
T Consensus 86 ke~~g----~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~ 161 (299)
T KOG1332|consen 86 KEENG----RWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPAS 161 (299)
T ss_pred ecCCC----chhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcC
Confidence 98765 4455566778999999999987664 889999999999988754 3444567789999999999984
Q ss_pred --C-----------CEEEEEECCCeEEEEECCCCe--EEEEEecCCCCeEEEEEeCCC----CEEEEEECCCeEEEEEcc
Q psy8748 1836 --G-----------QYFVTGSVDKSCKLWDFREKK--CVQTFFGHEADVNSVCFHPSG----LAFATGSEDKTARLFDIR 1896 (2004)
Q Consensus 1836 --g-----------~~LaSGS~DGsIrIWDlrs~k--~I~tl~~h~s~ItsIafSPdg----~~LaSgS~DGtIrIWDLr 1896 (2004)
| +.|++|+.|..|+||+..++. .-.++.+|.+.|+.++|.|.- .++++++.||++.||..+
T Consensus 162 ~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~ 241 (299)
T KOG1332|consen 162 APGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKD 241 (299)
T ss_pred CCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEec
Confidence 4 579999999999999998753 345588999999999999953 469999999999999876
Q ss_pred CCceeEE-EcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1897 ADQQIAT-YLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1897 tgk~i~t-~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
......+ .........+..+.|+..|++|++++.|+.|.+|.-
T Consensus 242 ~e~e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke 285 (299)
T KOG1332|consen 242 EEYEPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKE 285 (299)
T ss_pred CccCcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEe
Confidence 3322111 112234567899999999999999999999999974
No 133
>KOG0646|consensus
Probab=99.82 E-value=9.7e-19 Score=208.09 Aligned_cols=233 Identities=20% Similarity=0.355 Sum_probs=194.2
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCc
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGA 1771 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~ 1771 (2004)
.++|.|++-+|+|.+|+.|+..|.|++|.+.+|..+..+..|-..|+|+.|+.||.+|++|+.||.|.+|.+..
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~------ 154 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTD------ 154 (476)
T ss_pred ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEe------
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999742
Q ss_pred ceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCC--CCEEEEEECCCeEE
Q psy8748 1772 AKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPD--GQYFVTGSVDKSCK 1849 (2004)
Q Consensus 1772 ~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPd--g~~LaSGS~DGsIr 1849 (2004)
++.+..++ +-... ..+..|.-+|+++...+. ..++++++.|.+++
T Consensus 155 ------------------------lv~a~~~~--------~~~p~-~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k 201 (476)
T KOG0646|consen 155 ------------------------LVSADNDH--------SVKPL-HIFSDHTLSITDLQIGSGGTNARLYTASEDRTIK 201 (476)
T ss_pred ------------------------ecccccCC--------Cccce-eeeccCcceeEEEEecCCCccceEEEecCCceEE
Confidence 12222222 11122 345678888999888764 45899999999999
Q ss_pred EEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCc----------------eeEEEcCCCCCCCe
Q psy8748 1850 LWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQ----------------QIATYLPPNKNSGF 1913 (2004)
Q Consensus 1850 IWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk----------------~i~t~~~~~~~s~I 1913 (2004)
+||+..+..+.++ .....+.+++.+|.+..+++|+.+|.|.+.++.+.. .+..+..+.....|
T Consensus 202 ~wdlS~g~LLlti-~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~I 280 (476)
T KOG0646|consen 202 LWDLSLGVLLLTI-TFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAI 280 (476)
T ss_pred EEEeccceeeEEE-ecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcce
Confidence 9999999888777 456789999999999999999999999999875432 12223322333489
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCC
Q psy8748 1914 TSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNG 1964 (2004)
Q Consensus 1914 tsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg 1964 (2004)
+|++++-||..|++|+.||.|+|||+.+.++++++....++|+.+.+.|-.
T Consensus 281 TcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~~ 331 (476)
T KOG0646|consen 281 TCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPLE 331 (476)
T ss_pred eEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeeccc
Confidence 999999999999999999999999999999999988778999999996643
No 134
>KOG1036|consensus
Probab=99.82 E-value=8.5e-19 Score=200.47 Aligned_cols=249 Identities=22% Similarity=0.289 Sum_probs=207.3
Q ss_pred CCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCC
Q psy8748 1733 RSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLET 1812 (2004)
Q Consensus 1733 Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~t 1812 (2004)
....|.++.|+|.++.|+++++||.+++|++... ..+....|..++.+++|.+...+++|+-||.|+.+|+++
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~-------~l~~~~~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~ 84 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPAN-------SLKLKFKHGAPLLDCAFADESTIVTGGLDGQVRRYDLNT 84 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEeccCcEEEEeccch-------hhhhheecCCceeeeeccCCceEEEeccCceEEEEEecC
Confidence 3567999999999999999999999999999754 234455688999999999999999999999999999999
Q ss_pred CceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEE
Q psy8748 1813 GQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARL 1892 (2004)
Q Consensus 1813 g~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrI 1892 (2004)
+... ....|...|.|+.+.+....+++|+.|++|++||.+.......+.. ...|.++... |+.|++|+.|..|.+
T Consensus 85 ~~~~--~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~-~kkVy~~~v~--g~~LvVg~~~r~v~i 159 (323)
T KOG1036|consen 85 GNED--QIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQ-GKKVYCMDVS--GNRLVVGTSDRKVLI 159 (323)
T ss_pred Ccce--eeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccccccc-CceEEEEecc--CCEEEEeecCceEEE
Confidence 8764 4568999999999999999999999999999999997655555533 3478877764 668999999999999
Q ss_pred EEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC----eeeEEEccCCC---------CeEEEE
Q psy8748 1893 FDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKT----THNGVLSGHEN---------RVTSIS 1959 (2004)
Q Consensus 1893 WDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tg----e~l~tL~gHs~---------~VtsLa 1959 (2004)
||+++...........-...+.|+++-|++.=+++++-||+|.+=.+... .....++.|.. +|++++
T Consensus 160 yDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~ 239 (323)
T KOG1036|consen 160 YDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIA 239 (323)
T ss_pred EEcccccchhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeE
Confidence 99998877665545555677899999998888999999999988766554 44455666643 699999
Q ss_pred EcCCCCEEEEEECCCeEEEEECCCCeEEEEEEee
Q psy8748 1960 LSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVY 1993 (2004)
Q Consensus 1960 FSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik~~ 1993 (2004)
|+|-...|+|||.||.|.+||+.+.+.++.+..+
T Consensus 240 Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~ 273 (323)
T KOG1036|consen 240 FHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKY 273 (323)
T ss_pred eccccceEEecCCCceEEEccCcchhhhhhccCC
Confidence 9999889999999999999999988655544443
No 135
>KOG2096|consensus
Probab=99.81 E-value=1.7e-18 Score=197.36 Aligned_cols=304 Identities=19% Similarity=0.229 Sum_probs=208.7
Q ss_pred CCCCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccC
Q psy8748 1549 NAPEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMK 1628 (2004)
Q Consensus 1549 ~a~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~s 1628 (2004)
++..+|++.|++|+||.||++||| .+.|++||+|++.+ +.+ ...++++.--.+.. -..+.++
T Consensus 80 ~~LKgH~~~vt~~~FsSdGK~lat-~~~Dr~Ir~w~~~D--F~~------~eHr~~R~nve~dh---------pT~V~Fa 141 (420)
T KOG2096|consen 80 SVLKGHKKEVTDVAFSSDGKKLAT-ISGDRSIRLWDVRD--FEN------KEHRCIRQNVEYDH---------PTRVVFA 141 (420)
T ss_pred hhhhccCCceeeeEEcCCCceeEE-EeCCceEEEEecch--hhh------hhhhHhhccccCCC---------ceEEEEC
Confidence 345569999999999999999999 99999999999977 111 11233322111111 1122345
Q ss_pred CCCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCC---CCCcccccccccccccccceeEEEEeCCCC
Q psy8748 1629 PTSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMP---DAPKVKLMPKKSLKGHINKVNSVHYSGDSR 1705 (2004)
Q Consensus 1629 pdgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~---~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~ 1705 (2004)
||+...++..... ............. ......+.....-+.|.-.|..+-...++.
T Consensus 142 pDc~s~vv~~~~g---------------------~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k 200 (420)
T KOG2096|consen 142 PDCKSVVVSVKRG---------------------NKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAK 200 (420)
T ss_pred CCcceEEEEEccC---------------------CEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCce
Confidence 5543222111000 0000000000000 111112222222344777888888888999
Q ss_pred EEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCC--CCCcceEEEEEecCcc
Q psy8748 1706 HCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRD--STGAAKVIRELLGYEG 1783 (2004)
Q Consensus 1706 ~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~--~~~~~k~i~sl~gh~~ 1783 (2004)
+|++++.|..|.+|+++ |+.+..+......-+..+.+|+|+++++++..-.|++|.+--.+ ..........+.||..
T Consensus 201 ~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~s 279 (420)
T KOG2096|consen 201 YIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQS 279 (420)
T ss_pred EEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchh
Confidence 99999999999999997 99999998877777888999999999999999999999874322 1223344567889999
Q ss_pred ceeeeEEeCC-CcEEEeecCCeEEEEECCCC----ceeEE------eeccccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy8748 1784 FLSSCRFIDD-TTLLTGSGDMKIVTWNLETG----QRIHE------VAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWD 1852 (2004)
Q Consensus 1784 ~Vssvafsdd-~~LlSgS~DGtI~IWDl~tg----~~i~~------il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWD 1852 (2004)
.|...+|+++ .++++.+.||.+++||.+-. +-... ......+.-..+..+|+|+.|+.+. ...+++|.
T Consensus 280 aV~~~aFsn~S~r~vtvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~-gs~l~~~~ 358 (420)
T KOG2096|consen 280 AVLAAAFSNSSTRAVTVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSF-GSDLKVFA 358 (420)
T ss_pred heeeeeeCCCcceeEEEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeec-CCceEEEE
Confidence 9999999965 46999999999999997531 11100 1112233445899999999888765 45799999
Q ss_pred CCCCeEEEEEe-cCCCCeEEEEEeCCCCEEEEEECCCeEEEEE
Q psy8748 1853 FREKKCVQTFF-GHEADVNSVCFHPSGLAFATGSEDKTARLFD 1894 (2004)
Q Consensus 1853 lrs~k~I~tl~-~h~s~ItsIafSPdg~~LaSgS~DGtIrIWD 1894 (2004)
.++++....+. .|...|.+++|+++|+++++++ |..++++.
T Consensus 359 se~g~~~~~~e~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 359 SEDGKDYPELEDIHSTTISSISYSSDGKYIATCG-DRYVRVIR 400 (420)
T ss_pred cccCccchhHHHhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence 99887665553 6889999999999999999997 77888875
No 136
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.81 E-value=2e-16 Score=186.34 Aligned_cols=370 Identities=29% Similarity=0.496 Sum_probs=270.1
Q ss_pred CCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccce-eeEeecccccccccccCcccccccc-C
Q psy8748 1551 PEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELR-CLRAWKSIVDNLMSQEPATFRDLMM-K 1628 (2004)
Q Consensus 1551 ~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr-~lkt~~g~~~~V~s~~~~~f~~ll~-s 1628 (2004)
...|...+.++.|++.+..++. ++.|+.+.+|+... .. ....+.+... ..+..+.. .
T Consensus 61 ~~~~~~~i~~~~~~~~~~~~~~-~~~d~~~~~~~~~~-------------~~~~~~~~~~~~~-------~~~~~~~~~~ 119 (466)
T COG2319 61 LRGHEDSITSIAFSPDGELLLS-GSSDGTIKLWDLDN-------------GEKLIKSLEGLHD-------SSVSKLALSS 119 (466)
T ss_pred eeeccceEEEEEECCCCcEEEE-ecCCCcEEEEEcCC-------------CceeEEEEeccCC-------CceeeEEEEC
Confidence 3457888999999999999999 88999999999988 21 2333332111 00000000 1
Q ss_pred CCCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcc--cccccccccccccceeEEEEeCCCCE
Q psy8748 1629 PTSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKV--KLMPKKSLKGHINKVNSVHYSGDSRH 1706 (2004)
Q Consensus 1629 pdgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~l--k~~pi~sL~GHt~~VtsLaFSPDG~~ 1706 (2004)
+++.. . . .........-..... .......+.+|...|.+++|+|++.+
T Consensus 120 ~~~~~-~-------------------~----------~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 169 (466)
T COG2319 120 PDGNS-I-------------------L----------LASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKL 169 (466)
T ss_pred CCcce-E-------------------E----------eccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCE
Confidence 11100 0 0 000000000000011 13456778899999999999999999
Q ss_pred EEEEeC-CCeEEEEECCCCceEEEeeCCCCceEEEEEecCCC-EEEEeecCCeEEEEEcCCCCCCCcceEEE-EEecCcc
Q psy8748 1707 CVSGSL-DGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGN-FVACGGMDNMCTVYDLNNRDSTGAAKVIR-ELLGYEG 1783 (2004)
Q Consensus 1707 LASGS~-DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~-~LaSGS~DGtIrVWDl~t~~~~~~~k~i~-sl~gh~~ 1783 (2004)
+++++. |+.+++|+..++.....+.+|...|.+++|+|++. .+++++.|+.|++|+...+ .... .+.+|..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~------~~~~~~~~~~~~ 243 (466)
T COG2319 170 LASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTG------KLLRSTLSGHSD 243 (466)
T ss_pred EEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCC------cEEeeecCCCCc
Confidence 998886 99999999999999999999999999999999998 5555599999999977632 3333 5666666
Q ss_pred ceeeeEEeCCC-cEEEeecCCeEEEEECCCCce-eEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEE
Q psy8748 1784 FLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQR-IHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQT 1861 (2004)
Q Consensus 1784 ~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~~-i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~t 1861 (2004)
.. ...|.+++ .+++++.|+.+++||...... .... ..|...+.++.|+|++..+++++.|+.+.+||.........
T Consensus 244 ~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 321 (466)
T COG2319 244 SV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTL-SGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSS 321 (466)
T ss_pred ce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEE-ecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEE
Confidence 64 33666554 777899999999999987765 3333 67789999999999888888899999999999988876666
Q ss_pred Ee--cCCCCeEEEEEeCCCCEEEEE-ECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEE-EeCCCeEEEE
Q psy8748 1862 FF--GHEADVNSVCFHPSGLAFATG-SEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFC-GSDDNNVHVW 1937 (2004)
Q Consensus 1862 l~--~h~s~ItsIafSPdg~~LaSg-S~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaS-GSsDGsIrIW 1937 (2004)
.. .|...+..+.|.+++..++.+ ..|+.+.+|+........... . ...+..+.+.+ ...+.. +..++.+.+|
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 397 (466)
T COG2319 322 LTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGKPLKTLE--G-HSNVLSVSFSP-DGRVVSSGSTDGTVRLW 397 (466)
T ss_pred eeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCceeEEec--C-CceEEEEEECC-CCCEEEEecCCCceEEE
Confidence 65 777789999993332456555 678999999998877222221 1 12278888888 544444 6889999999
Q ss_pred ECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q psy8748 1938 DLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESN 1983 (2004)
Q Consensus 1938 DL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlst 1983 (2004)
+............+...+....+++++..+++++.++.+++|+...
T Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (466)
T COG2319 398 DLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLKT 443 (466)
T ss_pred ecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEEEEeccC
Confidence 9998888877765547899999999999999999999999999988
No 137
>KOG2048|consensus
Probab=99.81 E-value=7.6e-18 Score=207.15 Aligned_cols=266 Identities=17% Similarity=0.262 Sum_probs=222.7
Q ss_pred eCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEe-cCccceeeeEEeCCCcEEEeecCCeEEEEE
Q psy8748 1731 PLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELL-GYEGFLSSCRFIDDTTLLTGSGDMKIVTWN 1809 (2004)
Q Consensus 1731 ~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~-gh~~~Vssvafsdd~~LlSgS~DGtI~IWD 1809 (2004)
.-....|.+++|+.+.+.||.+-.+|.|.+|++... .-....+. +....+.+++|.+++++++.+.+|.|..||
T Consensus 22 d~~Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~-----w~~~~vi~g~~drsIE~L~W~e~~RLFS~g~sg~i~EwD 96 (691)
T KOG2048|consen 22 DYKPSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNN-----WFLEPVIHGPEDRSIESLAWAEGGRLFSSGLSGSITEWD 96 (691)
T ss_pred eeeccceEEEEEeccCCceeeeccCCcEEEEccCCC-----ceeeEEEecCCCCceeeEEEccCCeEEeecCCceEEEEe
Confidence 335678999999999999999999999999999763 23333444 446689999999999999999999999999
Q ss_pred CCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEE--EEecCCCCeEEEEEeCCCCEEEEEECC
Q psy8748 1810 LETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQ--TFFGHEADVNSVCFHPSGLAFATGSED 1887 (2004)
Q Consensus 1810 l~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~--tl~~h~s~ItsIafSPdg~~LaSgS~D 1887 (2004)
+.+++....+ ....+.|++++.+|.+..+++|++||.+..++...++... .+...++.|.++.|+|++..+++|+.|
T Consensus 97 l~~lk~~~~~-d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~D 175 (691)
T KOG2048|consen 97 LHTLKQKYNI-DSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSID 175 (691)
T ss_pred cccCceeEEe-cCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccC
Confidence 9999887544 5678899999999999999999999988888887776533 334456899999999999999999999
Q ss_pred CeEEEEEccCCceeEEEc-----C-CCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEc
Q psy8748 1888 KTARLFDIRADQQIATYL-----P-PNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLS 1961 (2004)
Q Consensus 1888 GtIrIWDLrtgk~i~t~~-----~-~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFS 1961 (2004)
|.|++||..++....... . .....-|.++.|-. ...|++|+..|+|.+||...+..+..+..|.+.|.+++..
T Consensus 176 g~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lr-d~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~ 254 (691)
T KOG2048|consen 176 GVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLR-DSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVA 254 (691)
T ss_pred ceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEee-cCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEc
Confidence 999999999988766221 1 11223466666664 4579999999999999999999999999999999999999
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeE-EEEEEeecCCCCccccc
Q psy8748 1962 PNGMALVTSSWDQFVKVWQESNTIV-WKVLKVYNLEKKTIFCV 2003 (2004)
Q Consensus 1962 PDg~~LaSgS~DGtIrIWdlstg~l-~k~Ik~~~~h~~~VtsV 2003 (2004)
+++.+++++|.|+.|.-|...+.+. |......+.|...|.++
T Consensus 255 ~~~d~vfsaGvd~~ii~~~~~~~~~~wv~~~~r~~h~hdvrs~ 297 (691)
T KOG2048|consen 255 DNEDRVFSAGVDPKIIQYSLTTNKSEWVINSRRDLHAHDVRSM 297 (691)
T ss_pred CCCCeEEEccCCCceEEEEecCCccceeeeccccCCcccceee
Confidence 9999999999999999999877644 88888888888887765
No 138
>KOG0300|consensus
Probab=99.81 E-value=7e-19 Score=199.40 Aligned_cols=324 Identities=16% Similarity=0.232 Sum_probs=238.3
Q ss_pred CCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCcccccccc--C
Q psy8748 1551 PEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMM--K 1628 (2004)
Q Consensus 1551 ~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~--s 1628 (2004)
-++|+++|+.|+.......+.+ ++.|.+-+||.+.+ ++|+..+.||...+.+-..-.-..++. +
T Consensus 144 ~~GHkDGiW~Vaa~~tqpi~gt-ASADhTA~iWs~Es-------------g~CL~~Y~GH~GSVNsikfh~s~~L~lTaS 209 (481)
T KOG0300|consen 144 LEGHKDGIWHVAADSTQPICGT-ASADHTARIWSLES-------------GACLATYTGHTGSVNSIKFHNSGLLLLTAS 209 (481)
T ss_pred hcccccceeeehhhcCCcceee-cccccceeEEeecc-------------ccceeeecccccceeeEEeccccceEEEcc
Confidence 3569999999999998889999 99999999999999 999999999988776522222222222 2
Q ss_pred CCCcchhhhhHhHHHHHHHHHHHH---HHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCC
Q psy8748 1629 PTSSINIYLKLQTAELKKELTQLI---DKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSR 1705 (2004)
Q Consensus 1629 pdgSidi~i~~~~~ql~k~i~ql~---s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~ 1705 (2004)
.|++..+ |......+..+-. ....+......+..............+---.|+..|.||.+.|.+..|-..|+
T Consensus 210 GD~taHI----W~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~ 285 (481)
T KOG0300|consen 210 GDETAHI----WKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQ 285 (481)
T ss_pred CCcchHH----HHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcc
Confidence 2333222 2111000110000 00000000000000000000001111111236788999999999999999999
Q ss_pred EEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccce
Q psy8748 1706 HCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFL 1785 (2004)
Q Consensus 1706 ~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~V 1785 (2004)
.+++++.|.+-.+||+++|..+..+.+|....+.++-+|..+++++.+.|.+.++||++. ....+..+.||...+
T Consensus 286 Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRe-----aI~sV~VFQGHtdtV 360 (481)
T KOG0300|consen 286 QMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFRE-----AIQSVAVFQGHTDTV 360 (481)
T ss_pred eeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchh-----hcceeeeecccccce
Confidence 999999999999999999999999999999999999999999999999999999999974 456678899999999
Q ss_pred eeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEE----EE
Q psy8748 1786 SSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCV----QT 1861 (2004)
Q Consensus 1786 ssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I----~t 1861 (2004)
+++.|..+..+++|++|.+|++||++........+ ....++..++++..+..++.--.+..|++||++....- ..
T Consensus 361 TS~vF~~dd~vVSgSDDrTvKvWdLrNMRsplATI-RtdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrts 439 (481)
T KOG0300|consen 361 TSVVFNTDDRVVSGSDDRTVKVWDLRNMRSPLATI-RTDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTS 439 (481)
T ss_pred eEEEEecCCceeecCCCceEEEeeeccccCcceee-ecCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCccc
Confidence 99999999999999999999999998766443222 34567889999988888988888899999999755432 23
Q ss_pred EecCCCCeEEEEEeCCCC--EEEEEECCCeEEEEEccCC
Q psy8748 1862 FFGHEADVNSVCFHPSGL--AFATGSEDKTARLFDIRAD 1898 (2004)
Q Consensus 1862 l~~h~s~ItsIafSPdg~--~LaSgS~DGtIrIWDLrtg 1898 (2004)
-.+|..-|.|++|..+.. -+++++.|..+.-|.+...
T Consensus 440 RqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p 478 (481)
T KOG0300|consen 440 RQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTP 478 (481)
T ss_pred ccccceeeeeeeccccCcccccccccccceeeeeEeccc
Confidence 358889999999986543 4788889999999998643
No 139
>KOG2445|consensus
Probab=99.80 E-value=1e-17 Score=190.99 Aligned_cols=285 Identities=17% Similarity=0.290 Sum_probs=214.8
Q ss_pred cccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCC----ceEEEeeCCCCceEEEEEec--CCCEEEEeecCCeEEEEE
Q psy8748 1689 KGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTG----NKTQVIPLRSAWVMSVAFAQ--SGNFVACGGMDNMCTVYD 1762 (2004)
Q Consensus 1689 ~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tg----k~l~ti~~Ht~~ItsLafSP--dg~~LaSGS~DGtIrVWD 1762 (2004)
.+|.+-|+|+.|.+.|+.+|+|+.|++|+|||..+. .+....+.|.+.|..+.|.+ -|+.+++++.|+++.||.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 579999999999999999999999999999996543 34556788999999999965 489999999999999998
Q ss_pred cCCCCCC---CcceEEEEEecCccceeeeEEeCCC---cEEEeecCCeEEEEECCCCceeE------Ee------ecccc
Q psy8748 1763 LNNRDST---GAAKVIRELLGYEGFLSSCRFIDDT---TLLTGSGDMKIVTWNLETGQRIH------EV------AQAHI 1824 (2004)
Q Consensus 1763 l~t~~~~---~~~k~i~sl~gh~~~Vssvafsdd~---~LlSgS~DGtI~IWDl~tg~~i~------~i------l~~h~ 1824 (2004)
-...... .......++......+..+.|.+.. .+++++.||.++||+.-..-.+. .+ ...+.
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~ 169 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNK 169 (361)
T ss_pred ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccccc
Confidence 6432211 2344556777888899999998654 48999999999999865432211 11 12355
Q ss_pred CCeEEEEECC---CCCEEEEEECC-----CeEEEEECCCC----eEEEEEecCCCCeEEEEEeCCC----CEEEEEECCC
Q psy8748 1825 GDVVSISLSP---DGQYFVTGSVD-----KSCKLWDFREK----KCVQTFFGHEADVNSVCFHPSG----LAFATGSEDK 1888 (2004)
Q Consensus 1825 ~~ItsLafSP---dg~~LaSGS~D-----GsIrIWDlrs~----k~I~tl~~h~s~ItsIafSPdg----~~LaSgS~DG 1888 (2004)
....|+.|+| ...+|++|+.+ +.++||....+ ..+.++.+|..+|+.++|.|+- ..+++++.||
T Consensus 170 ~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~kDg 249 (361)
T KOG2445|consen 170 QPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATKDG 249 (361)
T ss_pred CcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeecCc
Confidence 6788999997 34678888866 47888876543 3466778999999999999952 4589999999
Q ss_pred eEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEE
Q psy8748 1889 TARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALV 1968 (2004)
Q Consensus 1889 tIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~La 1968 (2004)
|+||.++...... .. .. + ..|+ .-+. -.-+.+..+.+|.+.|..+.|+-.|..|+
T Consensus 250 -v~I~~v~~~~s~i-~~-ee----~----~~~~--------~~~~------l~v~~vs~~~~H~~~VWrv~wNmtGtiLs 304 (361)
T KOG2445|consen 250 -VRIFKVKVARSAI-EE-EE----V----LAPD--------LMTD------LPVEKVSELDDHNGEVWRVRWNMTGTILS 304 (361)
T ss_pred -EEEEEEeeccchh-hh-hc----c----cCCC--------Cccc------cceEEeeeccCCCCceEEEEEeeeeeEEe
Confidence 9999987432211 10 00 0 0111 0011 12244566788999999999999999999
Q ss_pred EEECCCeEEEEECCCCeEEEEEEeecCCCC
Q psy8748 1969 TSSWDQFVKVWQESNTIVWKVLKVYNLEKK 1998 (2004)
Q Consensus 1969 SgS~DGtIrIWdlstg~l~k~Ik~~~~h~~ 1998 (2004)
+.|.||.||+|+..-...|+++..+...+.
T Consensus 305 StGdDG~VRLWkany~n~~kC~sv~~~e~~ 334 (361)
T KOG2445|consen 305 STGDDGCVRLWKANYNNLWKCTSVLKAEGS 334 (361)
T ss_pred ecCCCceeeehhhhhhhhheeeeEEeccCC
Confidence 999999999999988778888888876654
No 140
>KOG0269|consensus
Probab=99.80 E-value=5.4e-19 Score=219.00 Aligned_cols=286 Identities=21% Similarity=0.309 Sum_probs=221.8
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECCCC----ceEEEeeCC---CCceEEEEEec-CCCEEEEeecCCeEEEEEcC
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTG----NKTQVIPLR---SAWVMSVAFAQ-SGNFVACGGMDNMCTVYDLN 1764 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tg----k~l~ti~~H---t~~ItsLafSP-dg~~LaSGS~DGtIrVWDl~ 1764 (2004)
...++|...++-..++.+|. ..++|+.+... ++...+... ...+..+.|.. +.++|++++..|.|.+||+.
T Consensus 40 ~~~nAIs~nr~~~qiv~AGr-s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdln 118 (839)
T KOG0269|consen 40 AKANAISVNRDINQIVVAGR-SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLN 118 (839)
T ss_pred cccceEeecCCcceeEEecc-cceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecC
Confidence 45667777788888888876 36777765432 222222211 12356678875 57899999999999999997
Q ss_pred CCCCCCcceEEEEEecCccceeeeEEe--CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC-CCCEEEE
Q psy8748 1765 NRDSTGAAKVIRELLGYEGFLSSCRFI--DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP-DGQYFVT 1841 (2004)
Q Consensus 1765 t~~~~~~~k~i~sl~gh~~~Vssvafs--dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP-dg~~LaS 1841 (2004)
.. ...+.+..+..|...+.++.|+ ..+.+++|+.||.|++||++..+..... .+....|..++|+| .+..|++
T Consensus 119 k~---~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~-~~nSESiRDV~fsp~~~~~F~s 194 (839)
T KOG0269|consen 119 KS---IRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTF-RSNSESIRDVKFSPGYGNKFAS 194 (839)
T ss_pred cc---ccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccc-cccchhhhceeeccCCCceEEE
Confidence 53 1234455677899999999998 4567999999999999999988776444 45777899999999 6789999
Q ss_pred EECCCeEEEEECCCC-eEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcC
Q psy8748 1842 GSVDKSCKLWDFREK-KCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSS 1920 (2004)
Q Consensus 1842 GS~DGsIrIWDlrs~-k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSP 1920 (2004)
+.+.|.+..||++.. ++...+.+|.++|.|+.|+|++.+|++||.|+.|+|||+.+.+...... -....++.++.|-|
T Consensus 195 ~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~t-InTiapv~rVkWRP 273 (839)
T KOG0269|consen 195 IHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHT-INTIAPVGRVKWRP 273 (839)
T ss_pred ecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeE-Eeecceeeeeeecc
Confidence 999999999999965 4567788999999999999999999999999999999998655433222 13346799999999
Q ss_pred CCCE-EEEEe--CCCeEEEEECCC-CeeeEEEccCCCCeEEEEEcC-CCCEEEEEECCCeEEEEECCCC
Q psy8748 1921 SGRY-IFCGS--DDNNVHVWDLLK-TTHNGVLSGHENRVTSISLSP-NGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1921 dG~~-LaSGS--sDGsIrIWDL~t-ge~l~tL~gHs~~VtsLaFSP-Dg~~LaSgS~DGtIrIWdlstg 1984 (2004)
...+ |++++ .|-.|+|||++. .-+..++..|...++.++|.. |...+.+++.||+|..-.++++
T Consensus 274 ~~~~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~kna 342 (839)
T KOG0269|consen 274 ARSYHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFKNA 342 (839)
T ss_pred CccchhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHHHhhhhcc
Confidence 7654 55544 377899999965 456678889999999999965 6678999999999877666554
No 141
>KOG0639|consensus
Probab=99.79 E-value=9.2e-19 Score=207.51 Aligned_cols=249 Identities=20% Similarity=0.379 Sum_probs=205.6
Q ss_pred CCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEEC
Q psy8748 1732 LRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNL 1810 (2004)
Q Consensus 1732 ~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl 1810 (2004)
.|..-|.+++++...+++++|+. |.|+|||+........... .........+.+|... ++..+++|+.-.++.|||+
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k~Pvsq-Ldcl~rdnyiRSckL~pdgrtLivGGeastlsiWDL 494 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNKSPVSQ-LDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWDL 494 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCCCcccc-ccccCcccceeeeEecCCCceEEeccccceeeeeec
Confidence 47888899999988999999985 5699999976532222221 1222345667777766 5556999999999999999
Q ss_pred CCCceeEEe-eccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCe
Q psy8748 1811 ETGQRIHEV-AQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKT 1889 (2004)
Q Consensus 1811 ~tg~~i~~i-l~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGt 1889 (2004)
.......+. +........+++.+||.+..+++..||.|.|||+.+...++.+.+|.+.+.||.++++|..|.+|+-|.+
T Consensus 495 AapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDnt 574 (705)
T KOG0639|consen 495 AAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNT 574 (705)
T ss_pred cCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccc
Confidence 876543222 2233345678999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEE
Q psy8748 1890 ARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVT 1969 (2004)
Q Consensus 1890 IrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaS 1969 (2004)
|+.||+++++.+... .....|.++..+|++.++++|..++.+.|.... +.....+.-|..-|.++.|.+-|+++++
T Consensus 575 vRcWDlregrqlqqh---dF~SQIfSLg~cP~~dWlavGMens~vevlh~s-kp~kyqlhlheScVLSlKFa~cGkwfvS 650 (705)
T KOG0639|consen 575 VRCWDLREGRQLQQH---DFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTS-KPEKYQLHLHESCVLSLKFAYCGKWFVS 650 (705)
T ss_pred eeehhhhhhhhhhhh---hhhhhheecccCCCccceeeecccCcEEEEecC-CccceeecccccEEEEEEecccCceeee
Confidence 999999998887665 445679999999999999999999999999864 4445566779999999999999999999
Q ss_pred EECCCeEEEEECCCCeE
Q psy8748 1970 SSWDQFVKVWQESNTIV 1986 (2004)
Q Consensus 1970 gS~DGtIrIWdlstg~l 1986 (2004)
.|.|+.+..|...-|..
T Consensus 651 tGkDnlLnawrtPyGas 667 (705)
T KOG0639|consen 651 TGKDNLLNAWRTPYGAS 667 (705)
T ss_pred cCchhhhhhccCccccc
Confidence 99999999999988753
No 142
>KOG4328|consensus
Probab=99.79 E-value=6.8e-18 Score=200.19 Aligned_cols=299 Identities=19% Similarity=0.250 Sum_probs=225.3
Q ss_pred cccccccccccccceeEEEEeCCCC--EEEEEeCCCeEEEEECCC----CceEEEeeCCCCceEEEEEecC-CCEEEEee
Q psy8748 1681 KLMPKKSLKGHINKVNSVHYSGDSR--HCVSGSLDGKLIIWDTWT----GNKTQVIPLRSAWVMSVAFAQS-GNFVACGG 1753 (2004)
Q Consensus 1681 k~~pi~sL~GHt~~VtsLaFSPDG~--~LASGS~DGtIrVWDl~T----gk~l~ti~~Ht~~ItsLafSPd-g~~LaSGS 1753 (2004)
......+.+-|.++|++++|+|... .+|+|...|+|-+||+.+ ...+..+..|.++|.++.|+|. ...+++.+
T Consensus 175 ~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssS 254 (498)
T KOG4328|consen 175 DYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSS 254 (498)
T ss_pred cceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeec
Confidence 3445667778999999999999554 788898999999999952 2345667889999999999994 56899999
Q ss_pred cCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC-CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEE
Q psy8748 1754 MDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID-DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISL 1832 (2004)
Q Consensus 1754 ~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd-d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLaf 1832 (2004)
.||+|+.-|+++.. ...+.........+..+.++. +..++.++.=|...+||.+++........-|...|.++++
T Consensus 255 yDGtiR~~D~~~~i----~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~ 330 (498)
T KOG4328|consen 255 YDGTIRLQDFEGNI----SEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVAL 330 (498)
T ss_pred cCceeeeeeecchh----hHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeec
Confidence 99999999998652 222233333444566666663 4457777777899999999887755556678889999999
Q ss_pred CCCC-CEEEEEECCCeEEEEECCCCe----EEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEcc----CCceeEE
Q psy8748 1833 SPDG-QYFVTGSVDKSCKLWDFREKK----CVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIR----ADQQIAT 1903 (2004)
Q Consensus 1833 SPdg-~~LaSGS~DGsIrIWDlrs~k----~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLr----tgk~i~t 1903 (2004)
+|.. .++++++.|++.+|||++.-. +......|...|.+..|+|.+-.+++.+.|..|+|||.. ......+
T Consensus 331 NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~ 410 (498)
T KOG4328|consen 331 NPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGT 410 (498)
T ss_pred CCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccce
Confidence 9954 578999999999999998532 233445899999999999988789999999999999983 2333333
Q ss_pred EcCCCCC-C--CeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCC-CeEEE-EEcCCCCEEEEE-ECCCeEE
Q psy8748 1904 YLPPNKN-S--GFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHEN-RVTSI-SLSPNGMALVTS-SWDQFVK 1977 (2004)
Q Consensus 1904 ~~~~~~~-s--~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~-~VtsL-aFSPDg~~LaSg-S~DGtIr 1977 (2004)
+...... . ......|.|+..+|++|-.-..|-|||-..++.+..+..... .|.++ .|+|-+..+++| +..|.|+
T Consensus 411 I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~ 490 (498)
T KOG4328|consen 411 IPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIY 490 (498)
T ss_pred eeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceEE
Confidence 3211111 1 233568999999999999999999999988887777644333 45554 799988855554 5678899
Q ss_pred EEECCC
Q psy8748 1978 VWQESN 1983 (2004)
Q Consensus 1978 IWdlst 1983 (2004)
||.-++
T Consensus 491 vft~k~ 496 (498)
T KOG4328|consen 491 VFTNKK 496 (498)
T ss_pred EEecCC
Confidence 887654
No 143
>KOG2445|consensus
Probab=99.78 E-value=2.3e-17 Score=188.14 Aligned_cols=254 Identities=17% Similarity=0.244 Sum_probs=192.9
Q ss_pred CCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCC
Q psy8748 1551 PEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPT 1630 (2004)
Q Consensus 1551 ~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spd 1630 (2004)
...|++-|++|.|.+-|+++|+ |+.|++++|||... +. .
T Consensus 9 ~s~h~DlihdVs~D~~GRRmAt-CSsDq~vkI~d~~~--------------------~s----------~---------- 47 (361)
T KOG2445|consen 9 DSGHKDLIHDVSFDFYGRRMAT-CSSDQTVKIWDSTS--------------------DS----------G---------- 47 (361)
T ss_pred ccCCcceeeeeeecccCceeee-ccCCCcEEEEeccC--------------------CC----------C----------
Confidence 3468889999999999999999 99999999999755 00 0
Q ss_pred CcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeC--CCCEEE
Q psy8748 1631 SSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSG--DSRHCV 1708 (2004)
Q Consensus 1631 gSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSP--DG~~LA 1708 (2004)
.|.+....+.|.+.|..+.|.+ -|+.+|
T Consensus 48 --------------------------------------------------~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA 77 (361)
T KOG2445|consen 48 --------------------------------------------------TWSCTSSWRAHDGSIWRVVWAHPEFGQVVA 77 (361)
T ss_pred --------------------------------------------------ceEEeeeEEecCCcEEEEEecCccccceEE
Confidence 1122344567999999999974 689999
Q ss_pred EEeCCCeEEEEECC-----C-C---ceEEEeeCCCCceEEEEEecC--CCEEEEeecCCeEEEEEcCCCCCCCcceEEEE
Q psy8748 1709 SGSLDGKLIIWDTW-----T-G---NKTQVIPLRSAWVMSVAFAQS--GNFVACGGMDNMCTVYDLNNRDSTGAAKVIRE 1777 (2004)
Q Consensus 1709 SGS~DGtIrVWDl~-----T-g---k~l~ti~~Ht~~ItsLafSPd--g~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~s 1777 (2004)
+++.|+++.||.-. . | ....++....+.|++++|.|. |-.+++++.||.++||+...............
T Consensus 78 ~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~E 157 (361)
T KOG2445|consen 78 TCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHE 157 (361)
T ss_pred EEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhh
Confidence 99999999999641 1 1 233455667788999999984 77999999999999999876433333333332
Q ss_pred Ee-------cCccceeeeEEeCCC----cEEEeecC-----CeEEEEECCCCc-eeEE--eeccccCCeEEEEECCC---
Q psy8748 1778 LL-------GYEGFLSSCRFIDDT----TLLTGSGD-----MKIVTWNLETGQ-RIHE--VAQAHIGDVVSISLSPD--- 1835 (2004)
Q Consensus 1778 l~-------gh~~~Vssvafsdd~----~LlSgS~D-----GtI~IWDl~tg~-~i~~--il~~h~~~ItsLafSPd--- 1835 (2004)
+. .+.....|+.|.++. .+++|+.+ +.++||....+. .... .+.+|..+|++++|.|+
T Consensus 158 i~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr 237 (361)
T KOG2445|consen 158 IQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGR 237 (361)
T ss_pred hhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCC
Confidence 22 355667788888543 36666555 488898876554 2222 24589999999999995
Q ss_pred -CCEEEEEECCCeEEEEECCCC--------------------eEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEE
Q psy8748 1836 -GQYFVTGSVDKSCKLWDFREK--------------------KCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFD 1894 (2004)
Q Consensus 1836 -g~~LaSGS~DGsIrIWDlrs~--------------------k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWD 1894 (2004)
-..+++++.|| |+||.++.. +.+..+..|++.|..+.|+-.|..|.+.|.||.|++|.
T Consensus 238 ~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWk 316 (361)
T KOG2445|consen 238 SYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWK 316 (361)
T ss_pred ceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehh
Confidence 24799999999 999998731 23455678999999999999999999999999999997
Q ss_pred cc
Q psy8748 1895 IR 1896 (2004)
Q Consensus 1895 Lr 1896 (2004)
..
T Consensus 317 an 318 (361)
T KOG2445|consen 317 AN 318 (361)
T ss_pred hh
Confidence 54
No 144
>KOG1332|consensus
Probab=99.78 E-value=4.9e-18 Score=188.74 Aligned_cols=258 Identities=22% Similarity=0.327 Sum_probs=211.1
Q ss_pred eCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC---CCcEEEeecCCeEEE
Q psy8748 1731 PLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID---DTTLLTGSGDMKIVT 1807 (2004)
Q Consensus 1731 ~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd---d~~LlSgS~DGtI~I 1807 (2004)
..|.+.|.++...--|+.|++++.|+.|+|+..++.. ....+.++.+|.+++..+.|.. ++.|++++.||.|.+
T Consensus 8 t~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~---~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIi 84 (299)
T KOG1332|consen 8 TQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNG---QSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVII 84 (299)
T ss_pred hhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCC---CceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEE
Confidence 4688888888888889999999999999999998753 3577889999999999999984 567999999999999
Q ss_pred EECCCCceeEE-eeccccCCeEEEEECCC--CCEEEEEECCCeEEEEECCCC---eEEEEEecCCCCeEEEEEeCC---C
Q psy8748 1808 WNLETGQRIHE-VAQAHIGDVVSISLSPD--GQYFVTGSVDKSCKLWDFREK---KCVQTFFGHEADVNSVCFHPS---G 1878 (2004)
Q Consensus 1808 WDl~tg~~i~~-il~~h~~~ItsLafSPd--g~~LaSGS~DGsIrIWDlrs~---k~I~tl~~h~s~ItsIafSPd---g 1878 (2004)
|.-..++-... ....|...|++++|.|. |-.|++++.||.|.|.+.+.. ...+....|.-.|++++|.|. |
T Consensus 85 Wke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g 164 (299)
T KOG1332|consen 85 WKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPG 164 (299)
T ss_pred EecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCcCCCc
Confidence 99988853321 24578999999999995 558999999999999988754 223345689999999999985 4
Q ss_pred -----------CEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCC----CEEEEEeCCCeEEEEECCCC-
Q psy8748 1879 -----------LAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSG----RYIFCGSDDNNVHVWDLLKT- 1942 (2004)
Q Consensus 1879 -----------~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG----~~LaSGSsDGsIrIWDL~tg- 1942 (2004)
+.|++|+.|..|+||+..++.-........|...++.++|.|.- .+|++++.||++.||.....
T Consensus 165 ~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwVRDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~ 244 (299)
T KOG1332|consen 165 SLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWVRDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEY 244 (299)
T ss_pred cccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhhhhhhhccccCCCceeeEEecCCCcEEEEEecCcc
Confidence 56999999999999999887544444456788999999999953 58999999999999986522
Q ss_pred -e-eeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEE
Q psy8748 1943 -T-HNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLK 1991 (2004)
Q Consensus 1943 -e-~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik 1991 (2004)
. ....+......+..+.|+..|+.|+.++.|+.|.+|.-+....|+.+.
T Consensus 245 e~wk~tll~~f~~~~w~vSWS~sGn~LaVs~GdNkvtlwke~~~Gkw~~v~ 295 (299)
T KOG1332|consen 245 EPWKKTLLEEFPDVVWRVSWSLSGNILAVSGGDNKVTLWKENVDGKWEEVG 295 (299)
T ss_pred CcccccccccCCcceEEEEEeccccEEEEecCCcEEEEEEeCCCCcEEEcc
Confidence 1 122234456789999999999999999999999999988776777654
No 145
>KOG1445|consensus
Probab=99.77 E-value=1.1e-17 Score=201.58 Aligned_cols=116 Identities=20% Similarity=0.353 Sum_probs=98.6
Q ss_pred eEEEEEeC-CCCEEEEEECCCeEEEEEccCCceeEEE-----cCCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCC
Q psy8748 1869 VNSVCFHP-SGLAFATGSEDKTARLFDIRADQQIATY-----LPPNKNSGFTSCAVSS-SGRYIFCGSDDNNVHVWDLLK 1941 (2004)
Q Consensus 1869 ItsIafSP-dg~~LaSgS~DGtIrIWDLrtgk~i~t~-----~~~~~~s~ItsLafSP-dG~~LaSGSsDGsIrIWDL~t 1941 (2004)
|+.+.|.| |...+++++.||.|++|.+..+...... ....|...|+++.|+| -.+.|++++.|.+|++||+.+
T Consensus 630 vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~ 709 (1012)
T KOG1445|consen 630 VTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLAN 709 (1012)
T ss_pred eeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhh
Confidence 55677777 5677999999999999998754332111 1234667899999999 567899999999999999999
Q ss_pred CeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1942 TTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1942 ge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
++....+.+|.+.|.+++|+|+|+.+++.+.||+|++|+...+
T Consensus 710 ~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~ 752 (1012)
T KOG1445|consen 710 AKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSR 752 (1012)
T ss_pred hhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCC
Confidence 9999999999999999999999999999999999999998765
No 146
>KOG0267|consensus
Probab=99.77 E-value=4.3e-19 Score=218.27 Aligned_cols=255 Identities=25% Similarity=0.426 Sum_probs=221.5
Q ss_pred CEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccc
Q psy8748 1705 RHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGF 1784 (2004)
Q Consensus 1705 ~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~ 1784 (2004)
.+++.+..+-.+++||.+. +-.|...+.++..-..++.+++|+.|..+-+|.+... ..+..+.+|...
T Consensus 5 ~~~m~~~~~t~Lr~~~~~~------~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp------~~i~S~~~hesp 72 (825)
T KOG0267|consen 5 EFLMKTKRATKLRVWDTRE------FVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKP------NAITSLTGHESP 72 (825)
T ss_pred cccceeeeeeccccccchh------hhhhhhhhceeeeeccceeeccCCCceeeccccccCC------chhheeeccCCc
Confidence 3445555566788888533 3457777888877667889999999999999998654 333458899999
Q ss_pred eeeeEEeCCC-cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEe
Q psy8748 1785 LSSCRFIDDT-TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFF 1863 (2004)
Q Consensus 1785 Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~ 1863 (2004)
|.++.|.... .+++|+.+|+|++||++.++.+. .+.+|...+.++.|+|-+.+++.|+.|+.+++||.+...+...+.
T Consensus 73 IeSl~f~~~E~LlaagsasgtiK~wDleeAk~vr-tLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~ 151 (825)
T KOG0267|consen 73 IESLTFDTSERLLAAGSASGTIKVWDLEEAKIVR-TLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYK 151 (825)
T ss_pred ceeeecCcchhhhcccccCCceeeeehhhhhhhh-hhhccccCcceeeeccceEEeccccccccceehhhhccCceeeec
Confidence 9999999655 57788899999999999988774 457899999999999999999999999999999999888999999
Q ss_pred cCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy8748 1864 GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTT 1943 (2004)
Q Consensus 1864 ~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge 1943 (2004)
+|...+.++.|+|+|.+++.|+.|..++|||...|+....| ..|.+.+..+.|+|..-.++.|+.|+++++||+++.+
T Consensus 152 s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef--~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe 229 (825)
T KOG0267|consen 152 SHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEF--KSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFE 229 (825)
T ss_pred CCcceeEEEeecCCCceeeccCCcceeeeeccccccccccc--ccccccccccccCchhhhhccCCCCceeeeeccceeE
Confidence 99999999999999999999999999999999999999888 4566788999999999999999999999999999999
Q ss_pred eeEEEccCCCCeEEEEEcCCCCEEEEEECCC
Q psy8748 1944 HNGVLSGHENRVTSISLSPNGMALVTSSWDQ 1974 (2004)
Q Consensus 1944 ~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DG 1974 (2004)
.+.........|.+.+|+++++.+++|..+.
T Consensus 230 ~I~s~~~~~~~v~~~~fn~~~~~~~~G~q~s 260 (825)
T KOG0267|consen 230 VISSGKPETDGVRSLAFNPDGKIVLSGEQIS 260 (825)
T ss_pred EeeccCCccCCceeeeecCCceeeecCchhh
Confidence 9988888889999999999999888886553
No 147
>KOG1273|consensus
Probab=99.77 E-value=3.2e-17 Score=186.94 Aligned_cols=281 Identities=15% Similarity=0.231 Sum_probs=207.6
Q ss_pred eEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCcchhhh
Q psy8748 1558 RNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSSINIYL 1637 (2004)
Q Consensus 1558 VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgSidi~i 1637 (2004)
-+|+.||+.|.+||+ |+.||.|.|||..++ +
T Consensus 26 a~~~~Fs~~G~~lAv-Gc~nG~vvI~D~~T~-------------~----------------------------------- 56 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAV-GCANGRVVIYDFDTF-------------R----------------------------------- 56 (405)
T ss_pred cceEEeccCcceeee-eccCCcEEEEEcccc-------------c-----------------------------------
Confidence 789999999999999 999999999999881 0
Q ss_pred hHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEeCCCeEE
Q psy8748 1638 KLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLI 1717 (2004)
Q Consensus 1638 ~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIr 1717 (2004)
+-+.|.+|..+|++++||+||+.|+|++.|..|.
T Consensus 57 ----------------------------------------------iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~ 90 (405)
T KOG1273|consen 57 ----------------------------------------------IARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIK 90 (405)
T ss_pred ----------------------------------------------hhhhhhccccceeEEEecCCCCEeeeecCCceeE
Confidence 1234667999999999999999999999999999
Q ss_pred EEECCCCceEEEeeCCCCceEEEEEecCCC-EEEEeecCCeEEEEEcCCCCCCCcceEEEE-EecCcc-ceeeeEEe-CC
Q psy8748 1718 IWDTWTGNKTQVIPLRSAWVMSVAFAQSGN-FVACGGMDNMCTVYDLNNRDSTGAAKVIRE-LLGYEG-FLSSCRFI-DD 1793 (2004)
Q Consensus 1718 VWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~-~LaSGS~DGtIrVWDl~t~~~~~~~k~i~s-l~gh~~-~Vssvafs-dd 1793 (2004)
+||+..|..++.+. ..++|..+.|+|... ..++.-.+..-.+-++..+. ...... -.+... ...+..|. .+
T Consensus 91 lwDl~~gs~l~rir-f~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~----h~~Lp~d~d~dln~sas~~~fdr~g 165 (405)
T KOG1273|consen 91 LWDLLKGSPLKRIR-FDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPK----HSVLPKDDDGDLNSSASHGVFDRRG 165 (405)
T ss_pred EEeccCCCceeEEE-ccCccceeeeccccCCeEEEEEecCCcEEEEecCCc----eeeccCCCccccccccccccccCCC
Confidence 99999999888887 567899999999543 44444444445555554321 011000 001111 11122333 56
Q ss_pred CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCe-------E--EEEEe-
Q psy8748 1794 TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKK-------C--VQTFF- 1863 (2004)
Q Consensus 1794 ~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k-------~--I~tl~- 1863 (2004)
.++++|+..|.+.++|..+-+++..........|..+.++..|++|+.-+.|+.|+.|+++.-. . .+.+.
T Consensus 166 ~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qD 245 (405)
T KOG1273|consen 166 KYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQD 245 (405)
T ss_pred CEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhcccCccCCcChhHHHHH
Confidence 7899999999999999999988766544445779999999999999999999999999986311 1 01111
Q ss_pred -cCCCCeEEEEEeCCCCEEEEEEC-CCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy8748 1864 -GHEADVNSVCFHPSGLAFATGSE-DKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLL 1940 (2004)
Q Consensus 1864 -~h~s~ItsIafSPdg~~LaSgS~-DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~ 1940 (2004)
-....-.+++|+.+|.|++.|+. -..++||....|..++.+.. ..+.....+.|+|-...+++- ..|.+++|...
T Consensus 246 vVNk~~Wk~ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG-~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~~ 322 (405)
T KOG1273|consen 246 VVNKLQWKKCCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHG-TKGEELLDVNWHPVRPIIASI-ASGVVYIWAVV 322 (405)
T ss_pred HHhhhhhhheeecCCccEEEeccccceeEEEEecCCcceeeeecC-Cchhheeecccccceeeeeec-cCCceEEEEee
Confidence 01223457899999999888774 34699999999988877732 223567789999988877776 78999999863
No 148
>KOG0321|consensus
Probab=99.77 E-value=1.8e-17 Score=202.15 Aligned_cols=283 Identities=19% Similarity=0.275 Sum_probs=210.3
Q ss_pred EEEeC---CCCEEEEEeCCCeEEEEECCCCceE------EEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCC
Q psy8748 1698 VHYSG---DSRHCVSGSLDGKLIIWDTWTGNKT------QVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDS 1768 (2004)
Q Consensus 1698 LaFSP---DG~~LASGS~DGtIrVWDl~Tgk~l------~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~ 1768 (2004)
..|++ ....|+.+..||.|.++|....... .....|...|.++.|.|....|++++.|.++++||+.....
T Consensus 55 ~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l 134 (720)
T KOG0321|consen 55 DSFSAAPNKEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRL 134 (720)
T ss_pred ccccCCCCccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeecccee
Confidence 55553 3457899999999999997654332 44567999999999999777999999999999999986532
Q ss_pred CCcceEEEEEecCccceeeeEEeCC--CcEEEeecCCeEEEEECCCCcee------------------------E--Eee
Q psy8748 1769 TGAAKVIRELLGYEGFLSSCRFIDD--TTLLTGSGDMKIVTWNLETGQRI------------------------H--EVA 1820 (2004)
Q Consensus 1769 ~~~~k~i~sl~gh~~~Vssvafsdd--~~LlSgS~DGtI~IWDl~tg~~i------------------------~--~il 1820 (2004)
.-...+.+|.+.+.+++|.+. ..|++|+.||.|.+||++-...- . ...
T Consensus 135 ----~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~ 210 (720)
T KOG0321|consen 135 ----VGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKW 210 (720)
T ss_pred ----ecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhcccccc
Confidence 222358899999999999854 46999999999999998643200 0 001
Q ss_pred ccccCCeEE---EEECCCCCEEEEEEC-CCeEEEEECCCCeEEEE--------EecC---CCCeEEEEEeCCCCEEEEEE
Q psy8748 1821 QAHIGDVVS---ISLSPDGQYFVTGSV-DKSCKLWDFREKKCVQT--------FFGH---EADVNSVCFHPSGLAFATGS 1885 (2004)
Q Consensus 1821 ~~h~~~Its---LafSPdg~~LaSGS~-DGsIrIWDlrs~k~I~t--------l~~h---~s~ItsIafSPdg~~LaSgS 1885 (2004)
..+...|.+ +.+..|...|++++. |+.|++||++....... +..| ...+.++.....|.++++.+
T Consensus 211 kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsC 290 (720)
T KOG0321|consen 211 KAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASC 290 (720)
T ss_pred ccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCCeEEEEe
Confidence 223344444 555668888888887 99999999986543222 2223 33577888888899999988
Q ss_pred CCCeEEEEEccCCceeEEEcCCCC--CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCee-eEEEccCCCCeEEEEEcC
Q psy8748 1886 EDKTARLFDIRADQQIATYLPPNK--NSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTH-NGVLSGHENRVTSISLSP 1962 (2004)
Q Consensus 1886 ~DGtIrIWDLrtgk~i~t~~~~~~--~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~-l~tL~gHs~~VtsLaFSP 1962 (2004)
.|+.|++||+.+...-......++ ..-...-..+|++.++++|+.|+..++|.+.+.+. ...+.+|...|++++|.|
T Consensus 291 tD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~p 370 (720)
T KOG0321|consen 291 TDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLP 370 (720)
T ss_pred cCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeecc
Confidence 999999999986544332222221 12233446789999999999999999999987554 456689999999999987
Q ss_pred C-CCEEEEEECCCeEEEEECCCC
Q psy8748 1963 N-GMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1963 D-g~~LaSgS~DGtIrIWdlstg 1984 (2004)
. -.-+++|++|..+++|++..+
T Consensus 371 S~~t~v~TcSdD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 371 SATTPVATCSDDFRVKIWRLSNG 393 (720)
T ss_pred ccCCCceeeccCcceEEEeccCc
Confidence 3 234788899999999999765
No 149
>KOG0269|consensus
Probab=99.76 E-value=5.4e-18 Score=210.26 Aligned_cols=263 Identities=18% Similarity=0.270 Sum_probs=198.5
Q ss_pred ceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEE-EEEecCccceeeeEEe--CCCcEEEeecCCeEEEEECCC
Q psy8748 1736 WVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVI-RELLGYEGFLSSCRFI--DDTTLLTGSGDMKIVTWNLET 1812 (2004)
Q Consensus 1736 ~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i-~sl~gh~~~Vssvafs--dd~~LlSgS~DGtI~IWDl~t 1812 (2004)
...+|...++-..++.++.. .+++|.++........... +........+..+.|. .++.+++++..|.|.+||+..
T Consensus 41 ~~nAIs~nr~~~qiv~AGrs-~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk 119 (839)
T KOG0269|consen 41 KANAISVNRDINQIVVAGRS-LLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNK 119 (839)
T ss_pred ccceEeecCCcceeEEeccc-ceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCc
Confidence 35566677777777777754 5788887654322211111 1111111223345555 456799999999999999987
Q ss_pred --CceeEEeeccccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeC-CCCEEEEEECCC
Q psy8748 1813 --GQRIHEVAQAHIGDVVSISLSP-DGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHP-SGLAFATGSEDK 1888 (2004)
Q Consensus 1813 --g~~i~~il~~h~~~ItsLafSP-dg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSP-dg~~LaSgS~DG 1888 (2004)
.+.....+..|...+.++.|++ ..++|++|+.||.|++||++..+...++.+....|+.+.|+| .+.+|+++...|
T Consensus 120 ~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG 199 (839)
T KOG0269|consen 120 SIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSG 199 (839)
T ss_pred cccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCc
Confidence 2233345789999999999998 567899999999999999999999999999999999999999 678899999999
Q ss_pred eEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEcc-CCCCeEEEEEcCCCCE-
Q psy8748 1889 TARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSG-HENRVTSISLSPNGMA- 1966 (2004)
Q Consensus 1889 tIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~g-Hs~~VtsLaFSPDg~~- 1966 (2004)
.+++||++..... .+....|.+.|.|+.|+|++.+||+|+.|+.|+|||+.+.+......- ...+|.++.|-|...+
T Consensus 200 ~lqlWDlRqp~r~-~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~~~h 278 (839)
T KOG0269|consen 200 YLQLWDLRQPDRC-EKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPARSYH 278 (839)
T ss_pred eEEEeeccCchhH-HHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCccch
Confidence 9999999865442 223357889999999999999999999999999999976554333222 3568999999997665
Q ss_pred EEEEE--CCCeEEEEECCCCeEEEEEEeecCCCCcccc
Q psy8748 1967 LVTSS--WDQFVKVWQESNTIVWKVLKVYNLEKKTIFC 2002 (2004)
Q Consensus 1967 LaSgS--~DGtIrIWdlstg~l~k~Ik~~~~h~~~Vts 2002 (2004)
|++++ .|-.|+|||+... +-...++..|...++.
T Consensus 279 LAtcsmv~dtsV~VWDvrRP--YIP~~t~~eH~~~vt~ 314 (839)
T KOG0269|consen 279 LATCSMVVDTSVHVWDVRRP--YIPYATFLEHTDSVTG 314 (839)
T ss_pred hhhhhccccceEEEEeeccc--cccceeeeccCccccc
Confidence 66664 4889999999875 4566777777776654
No 150
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.76 E-value=2.9e-15 Score=176.55 Aligned_cols=290 Identities=33% Similarity=0.559 Sum_probs=236.1
Q ss_pred cccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCc-eEEEeeCCC-CceEEEEE-ecCCC-EEEEeec-CCeEEEE
Q psy8748 1687 SLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGN-KTQVIPLRS-AWVMSVAF-AQSGN-FVACGGM-DNMCTVY 1761 (2004)
Q Consensus 1687 sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk-~l~ti~~Ht-~~ItsLaf-SPdg~-~LaSGS~-DGtIrVW 1761 (2004)
.+.+|...|.++.|.+.+..++.++.|+.+.+|+...+. ....+..+. ..+..+.+ ++++. .++..+. |+.+.+|
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 139 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEKLIKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLW 139 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCceeEEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEE
Confidence 567899999999999999999999999999999998887 666666644 37777777 77777 5555444 8999999
Q ss_pred EcCCCCCCCcceEEEEEecCccceeeeEEeCCC-cEEEeec-CCeEEEEECCCCceeEEeeccccCCeEEEEECCCCC-E
Q psy8748 1762 DLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSG-DMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQ-Y 1838 (2004)
Q Consensus 1762 Dl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~-DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~-~ 1838 (2004)
+... ..........|...+..+.|.++. .+++++. ++.+++|+...+.... ...+|...+.+++|+|++. .
T Consensus 140 ~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~ 213 (466)
T COG2319 140 DLST-----PGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLS-TLAGHTDPVSSLAFSPDGGLL 213 (466)
T ss_pred EecC-----CCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEE-eeccCCCceEEEEEcCCcceE
Confidence 9974 246677888899999999999777 4666664 9999999999866653 3456899999999999998 5
Q ss_pred EEEEECCCeEEEEECCCCeEEE-EEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCce-eEEEcCCCCCCCeEEE
Q psy8748 1839 FVTGSVDKSCKLWDFREKKCVQ-TFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQ-IATYLPPNKNSGFTSC 1916 (2004)
Q Consensus 1839 LaSGS~DGsIrIWDlrs~k~I~-tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~-i~t~~~~~~~s~ItsL 1916 (2004)
+++++.|+.|++||...+.... .+.+|.... ...|++++..+++++.|+.+++|+.+.... .... ..+...+.++
T Consensus 214 ~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--~~~~~~v~~~ 290 (466)
T COG2319 214 IASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTL--SGHSSSVLSV 290 (466)
T ss_pred EEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEE--ecCCccEEEE
Confidence 5555899999999998787777 677887775 448999998899999999999999987665 4443 4556789999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEc--cCCCCeEEEEEcCCCCEEEEE-ECCCeEEEEECCCCe
Q psy8748 1917 AVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLS--GHENRVTSISLSPNGMALVTS-SWDQFVKVWQESNTI 1985 (2004)
Q Consensus 1917 afSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~--gHs~~VtsLaFSPDg~~LaSg-S~DGtIrIWdlstg~ 1985 (2004)
.|+|++..+++++.|+.+.+||..+........ .|...+..+.|.+++..++.+ ..|+.+.+|+.....
T Consensus 291 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 362 (466)
T COG2319 291 AFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIRLWDLRTGK 362 (466)
T ss_pred EECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEEeeecCCCc
Confidence 999998888889999999999998887777665 788889999994333566666 688999999998875
No 151
>KOG0267|consensus
Probab=99.75 E-value=1.3e-18 Score=214.18 Aligned_cols=240 Identities=27% Similarity=0.458 Sum_probs=215.0
Q ss_pred ccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEc
Q psy8748 1684 PKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDL 1763 (2004)
Q Consensus 1684 pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl 1763 (2004)
..+.+..|...|.++..-..++.+++||.|..+-+|.+.....+..+.+|..+|.++.|+++...|++|+.+|+|++||+
T Consensus 20 ~~~~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDl 99 (825)
T KOG0267|consen 20 DTREFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDL 99 (825)
T ss_pred cchhhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhcccccCCceeeeeh
Confidence 34567789999999998778899999999999999999888888889999999999999999999999999999999999
Q ss_pred CCCCCCCcceEEEEEecCccceeeeEEeCCC-cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEE
Q psy8748 1764 NNRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTG 1842 (2004)
Q Consensus 1764 ~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSG 1842 (2004)
+. .+.++++.+|...+..+.|++-. +++.|+.|+.+++||++...+.+. +.+|...+.++.|+|+|++++.|
T Consensus 100 ee------Ak~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~-~~s~~~vv~~l~lsP~Gr~v~~g 172 (825)
T KOG0267|consen 100 EE------AKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHT-YKSHTRVVDVLRLSPDGRWVASG 172 (825)
T ss_pred hh------hhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceee-ecCCcceeEEEeecCCCceeecc
Confidence 84 46677899999999999999755 466788999999999998777744 46699999999999999999999
Q ss_pred ECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCC
Q psy8748 1843 SVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSG 1922 (2004)
Q Consensus 1843 S~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG 1922 (2004)
+.|..++|||...|+....|..|.+.+..+.|+|..-.++.|+.|+++++||+++...+..... ...+|.+.+|+|+|
T Consensus 173 ~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~--~~~~v~~~~fn~~~ 250 (825)
T KOG0267|consen 173 GEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKP--ETDGVRSLAFNPDG 250 (825)
T ss_pred CCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEeeccCC--ccCCceeeeecCCc
Confidence 9999999999999999999999999999999999999999999999999999998877766643 35789999999999
Q ss_pred CEEEEEeCCC
Q psy8748 1923 RYIFCGSDDN 1932 (2004)
Q Consensus 1923 ~~LaSGSsDG 1932 (2004)
..+++|....
T Consensus 251 ~~~~~G~q~s 260 (825)
T KOG0267|consen 251 KIVLSGEQIS 260 (825)
T ss_pred eeeecCchhh
Confidence 9999987654
No 152
>KOG4283|consensus
Probab=99.75 E-value=1.6e-16 Score=179.83 Aligned_cols=265 Identities=23% Similarity=0.282 Sum_probs=192.2
Q ss_pred eCCCCceEEEEEec-CCCEEEEeecCCeEEEEEcCCCCCCCcce------E---EEEEecCccceeeeEEe--CCCcEEE
Q psy8748 1731 PLRSAWVMSVAFAQ-SGNFVACGGMDNMCTVYDLNNRDSTGAAK------V---IRELLGYEGFLSSCRFI--DDTTLLT 1798 (2004)
Q Consensus 1731 ~~Ht~~ItsLafSP-dg~~LaSGS~DGtIrVWDl~t~~~~~~~k------~---i~sl~gh~~~Vssvafs--dd~~LlS 1798 (2004)
..|.+.|.++...+ .|+++++|+.||.|.+||+++........ + .....+|.-.|..+.|. +.+.+.+
T Consensus 40 r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFts 119 (397)
T KOG4283|consen 40 RPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTS 119 (397)
T ss_pred ccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeec
Confidence 45788999999987 68999999999999999998643211111 1 11234566778888886 6678999
Q ss_pred eecCCeEEEEECCCCceeEEeeccccCCeEEEEECCC---CCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEe
Q psy8748 1799 GSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPD---GQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFH 1875 (2004)
Q Consensus 1799 gS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPd---g~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafS 1875 (2004)
++-|.++++||.++-+....+ ...+.|.+-+++|- .-++++|..|-.|++.|+.+|.....+.+|.+.|.++.|+
T Consensus 120 sSFDhtlKVWDtnTlQ~a~~F--~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Ws 197 (397)
T KOG4283|consen 120 SSFDHTLKVWDTNTLQEAVDF--KMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWS 197 (397)
T ss_pred ccccceEEEeecccceeeEEe--ecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEec
Confidence 999999999999998876554 45677888888883 4478888889999999999999999999999999999999
Q ss_pred CCCCE-EEEEECCCeEEEEEccCC-ceeEEE------------cCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy8748 1876 PSGLA-FATGSEDKTARLFDIRAD-QQIATY------------LPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLK 1941 (2004)
Q Consensus 1876 Pdg~~-LaSgS~DGtIrIWDLrtg-k~i~t~------------~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~t 1941 (2004)
|...+ +++|+.||.|++||++.. .+...+ ....|.+.+..++|..+|.++++.+.|..+++|+..+
T Consensus 198 p~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~ 277 (397)
T KOG4283|consen 198 PSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMES 277 (397)
T ss_pred cCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeeccc
Confidence 97766 788999999999999754 222222 1344667789999999999999999999999999987
Q ss_pred CeeeEEEc---cCCCC----eEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEEeecCCCCcccc
Q psy8748 1942 TTHNGVLS---GHENR----VTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFC 2002 (2004)
Q Consensus 1942 ge~l~tL~---gHs~~----VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik~~~~h~~~Vts 2002 (2004)
|+....-. .|... +. +. +-+...++---.|+.+.++++-.+.. ++.++.|.+.|.|
T Consensus 278 G~ntl~~~g~~~~n~~~~~~~~-~~-~~~s~vfv~~p~~~~lall~~~sgs~---ir~l~~h~k~i~c 340 (397)
T KOG4283|consen 278 GRNTLREFGPIIHNQTTSFAVH-IQ-SMDSDVFVLFPNDGSLALLNLLEGSF---VRRLSTHLKRINC 340 (397)
T ss_pred CcccccccccccccccccceEE-Ee-ecccceEEEEecCCeEEEEEccCceE---EEeeecccceeeE
Confidence 76432211 11111 11 22 22333444444456677777766643 3334444444443
No 153
>KOG0321|consensus
Probab=99.74 E-value=6.9e-17 Score=197.21 Aligned_cols=291 Identities=19% Similarity=0.238 Sum_probs=205.6
Q ss_pred ccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE--eeCCCCceEEEEEecC-CCEEEEeecCCeEEEEEcC
Q psy8748 1688 LKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQV--IPLRSAWVMSVAFAQS-GNFVACGGMDNMCTVYDLN 1764 (2004)
Q Consensus 1688 L~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~t--i~~Ht~~ItsLafSPd-g~~LaSGS~DGtIrVWDl~ 1764 (2004)
...|.+.|.++.|-|....|++++.|.++++||+++++.... +.+|.+.|.++||++. ...|++|+.||.|.|||+.
T Consensus 96 ~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R 175 (720)
T KOG0321|consen 96 PLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCR 175 (720)
T ss_pred cccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEe
Confidence 456999999999999667899999999999999999988876 8899999999999995 5688999999999999987
Q ss_pred CCCCC--------------C---cc----eEEEEEecC----ccceeeeEEeCCCcEEEeec-CCeEEEEECCCCceeEE
Q psy8748 1765 NRDST--------------G---AA----KVIRELLGY----EGFLSSCRFIDDTTLLTGSG-DMKIVTWNLETGQRIHE 1818 (2004)
Q Consensus 1765 t~~~~--------------~---~~----k~i~sl~gh----~~~Vssvafsdd~~LlSgS~-DGtI~IWDl~tg~~i~~ 1818 (2004)
..... . .. +.+.....+ .+.|+.+.|-++..+++++. |+.|++||++.......
T Consensus 176 ~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r 255 (720)
T KOG0321|consen 176 CNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYR 255 (720)
T ss_pred ccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccc
Confidence 43210 0 00 001111112 23456677778888998887 99999999987654432
Q ss_pred e-------eccc---cCCeEEEEECCCCCEEEEEECCCeEEEEECCCCe--EEEEEecCCCC--eEEEEEeCCCCEEEEE
Q psy8748 1819 V-------AQAH---IGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKK--CVQTFFGHEAD--VNSVCFHPSGLAFATG 1884 (2004)
Q Consensus 1819 i-------l~~h---~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k--~I~tl~~h~s~--ItsIafSPdg~~LaSg 1884 (2004)
. +..| .-.++++..+..|.++++.+.|+.|++|++.... ++..+.++... -..-..+|++.++++|
T Consensus 256 ~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~Sg 335 (720)
T KOG0321|consen 256 QEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSG 335 (720)
T ss_pred cCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCceEecc
Confidence 2 1112 3357888888889999999999999999997543 23333333211 1223468999999999
Q ss_pred ECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEECCCCee--------------eEEEc
Q psy8748 1885 SEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSG-RYIFCGSDDNNVHVWDLLKTTH--------------NGVLS 1949 (2004)
Q Consensus 1885 S~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG-~~LaSGSsDGsIrIWDL~tge~--------------l~tL~ 1949 (2004)
+.|+..++|.+.+........ .+|...|++++|.|.. .-++++++|.++++|++.++-. ...++
T Consensus 336 Ssd~~ayiw~vs~~e~~~~~l-~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~l~e~~~adk~s~v~~~~~rfk 414 (720)
T KOG0321|consen 336 SSDEQAYIWVVSSPEAPPALL-LGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNGLEEIYAADKDSIVYEYSRRFK 414 (720)
T ss_pred CCCcceeeeeecCccCChhhh-hCcceEEEEEeeccccCCCceeeccCcceEEEeccCchhhccccccchhhhhhhhhhh
Confidence 999999999998766544332 4667789999999832 3466669999999999865422 22345
Q ss_pred cCCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Q psy8748 1950 GHENRVTSISLSPNGMALVTSSWDQFVKVWQE 1981 (2004)
Q Consensus 1950 gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdl 1981 (2004)
+|...+..+.++-.+.+.... .+..++|..
T Consensus 415 ~~~p~~~nv~ss~~~t~~~pR--~~~~r~~ss 444 (720)
T KOG0321|consen 415 GHLPQVLNVNSSLRKTYKDPR--EGMNRISSS 444 (720)
T ss_pred ccccccccccccccccccchh--hhccccccC
Confidence 566666666554433332222 344555543
No 154
>KOG4378|consensus
Probab=99.74 E-value=4.7e-17 Score=193.21 Aligned_cols=261 Identities=20% Similarity=0.269 Sum_probs=206.4
Q ss_pred ceeEEEEeCCCC-EEEEEeCCCeEEEEECCCCc---eEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCC
Q psy8748 1694 KVNSVHYSGDSR-HCVSGSLDGKLIIWDTWTGN---KTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDST 1769 (2004)
Q Consensus 1694 ~VtsLaFSPDG~-~LASGS~DGtIrVWDl~Tgk---~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~ 1769 (2004)
+|.++.|+.... .+++.+.|..+++|. +.|+ ....-+.....-.|+.......++++||..|.|+|||++.
T Consensus 36 g~~s~~w~~~n~lvvas~~gdk~~~~~~-K~g~~~~Vp~~~k~~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~---- 110 (673)
T KOG4378|consen 36 GDFSFNWQRRNFLVVASMAGDKVMRIKE-KDGKTPEVPRVRKLTGDNAFCVACASQSLYEISGGQSGCVKIWDLRA---- 110 (673)
T ss_pred cceeeeccccceEEEeecCCceeEEEec-ccCCCCccceeeccccchHHHHhhhhcceeeeccCcCceeeehhhHH----
Confidence 488999987654 233445688899996 3333 2222222223445555555568999999999999999973
Q ss_pred CcceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCC-EEEEEECCCe
Q psy8748 1770 GAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQ-YFVTGSVDKS 1847 (2004)
Q Consensus 1770 ~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~-~LaSGS~DGs 1847 (2004)
..+.+.+.+|...|+++.|. .+.++++++..|.|.+....++.....+..+....|.-+.|++..+ +|.+++.+|.
T Consensus 111 --kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~ 188 (673)
T KOG4378|consen 111 --KLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGA 188 (673)
T ss_pred --HHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCe
Confidence 35667788999999999998 5667999999999999999998877666545556677899999766 5667889999
Q ss_pred EEEEECCCCeEEEEE-ecCCCCeEEEEEeCC-CCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEE
Q psy8748 1848 CKLWDFREKKCVQTF-FGHEADVNSVCFHPS-GLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYI 1925 (2004)
Q Consensus 1848 IrIWDlrs~k~I~tl-~~h~s~ItsIafSPd-g~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~L 1925 (2004)
|.+||+....++..+ ..|..+...|+|+|. ..+|++.+.|.+|.+||++..+....+. ...+.+.++|+++|.+|
T Consensus 189 VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~---y~~Plstvaf~~~G~~L 265 (673)
T KOG4378|consen 189 VTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT---YSHPLSTVAFSECGTYL 265 (673)
T ss_pred EEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceee---ecCCcceeeecCCceEE
Confidence 999999877766554 579999999999994 5678899999999999999776665553 23568899999999999
Q ss_pred EEEeCCCeEEEEECCC-CeeeEEEccCCCCeEEEEEcCCC
Q psy8748 1926 FCGSDDNNVHVWDLLK-TTHNGVLSGHENRVTSISLSPNG 1964 (2004)
Q Consensus 1926 aSGSsDGsIrIWDL~t-ge~l~tL~gHs~~VtsLaFSPDg 1964 (2004)
++|+..|.|..||++. ..++..+.+|...|++++|-+..
T Consensus 266 ~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 266 CAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred EeecCCceEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence 9999999999999975 55788889999999999997754
No 155
>KOG4378|consensus
Probab=99.73 E-value=1e-16 Score=190.40 Aligned_cols=281 Identities=14% Similarity=0.166 Sum_probs=215.3
Q ss_pred CeEEEEECCCCceEEEeeCCC--CceEEEEEecCCC-EEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEE
Q psy8748 1714 GKLIIWDTWTGNKTQVIPLRS--AWVMSVAFAQSGN-FVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRF 1790 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~ti~~Ht--~~ItsLafSPdg~-~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvaf 1790 (2004)
..+++||+........+..|+ ..+.+++|..... .+++.+.|..+++|.-... ...........+. .-.|+..
T Consensus 12 d~~kl~D~s~~~~~~~~~~~t~~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~--~~~Vp~~~k~~gd--~~~Cv~~ 87 (673)
T KOG4378|consen 12 DKTKLSDFSDLETKSEYVHQTAEPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGK--TPEVPRVRKLTGD--NAFCVAC 87 (673)
T ss_pred CceEEeecccccCccccccCCCCCcceeeeccccceEEEeecCCceeEEEecccCC--CCccceeeccccc--hHHHHhh
Confidence 479999988765555444332 2489999987654 2334456778889976543 2233333333333 2233333
Q ss_pred e-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecC-CCC
Q psy8748 1791 I-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGH-EAD 1868 (2004)
Q Consensus 1791 s-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h-~s~ 1868 (2004)
. ..-++++|+..+.|+|||++ .+.+++..++|...|+++.++....+|++++..|.|.|..+.++.....+... ...
T Consensus 88 ~s~S~y~~sgG~~~~Vkiwdl~-~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqs 166 (673)
T KOG4378|consen 88 ASQSLYEISGGQSGCVKIWDLR-AKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQS 166 (673)
T ss_pred hhcceeeeccCcCceeeehhhH-HHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCe
Confidence 2 23568999999999999999 56666788999999999999999999999999999999999988877777544 345
Q ss_pred eEEEEEeCCCCE-EEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEECCCCeeeE
Q psy8748 1869 VNSVCFHPSGLA-FATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSS-GRYIFCGSDDNNVHVWDLLKTTHNG 1946 (2004)
Q Consensus 1869 ItsIafSPdg~~-LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPd-G~~LaSGSsDGsIrIWDL~tge~l~ 1946 (2004)
|+-+.|++..++ |.+++.+|.|.+||+........+. ..|..+...++|+|. ..+|++.+.|..|.+||........
T Consensus 167 vRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~-~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~ 245 (673)
T KOG4378|consen 167 VRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHAS-EAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTD 245 (673)
T ss_pred EEEeecccccceeeEeeccCCeEEEEeccCCCcccchh-hhccCCcCcceecCCccceEEEecccceEEEeecccccccc
Confidence 678999997665 6678899999999998766665553 466778889999994 5677888999999999998776666
Q ss_pred EEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEEeecCCCCccccc
Q psy8748 1947 VLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003 (2004)
Q Consensus 1947 tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik~~~~h~~~VtsV 2003 (2004)
.+. ...+.+.++|.++|.+|+.|+..|.|..||+...+ ..+.+..+|...|+||
T Consensus 246 ~l~-y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k--~Pv~v~sah~~sVt~v 299 (673)
T KOG4378|consen 246 RLT-YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTK--APVAVRSAHDASVTRV 299 (673)
T ss_pred eee-ecCCcceeeecCCceEEEeecCCceEEEEecccCC--CCceEeeecccceeEE
Confidence 664 46789999999999999999999999999998764 5577777888888886
No 156
>KOG1538|consensus
Probab=99.73 E-value=2.8e-16 Score=190.57 Aligned_cols=273 Identities=17% Similarity=0.260 Sum_probs=220.0
Q ss_pred ceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcce
Q psy8748 1694 KVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAK 1773 (2004)
Q Consensus 1694 ~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k 1773 (2004)
.|+.++|-|||..|+.+. +..+.+||..+|..+.++++|.+.|++++|+.||+.+++|+.|..|.+|+-.-..
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG------ 86 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEG------ 86 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccc------
Confidence 899999999999877765 4579999999999999999999999999999999999999999999999864311
Q ss_pred EEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy8748 1774 VIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDF 1853 (2004)
Q Consensus 1774 ~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDl 1853 (2004)
.-...|.+.|.|+.|.+-+..++.+.=...-+|......... ......+.+++|..||.+++.|-.+|+|.+-+-
T Consensus 87 --~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K---~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk 161 (1081)
T KOG1538|consen 87 --ILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSK---HKSSSRIICCSWTNDGQYLALGMFNGTISIRNK 161 (1081)
T ss_pred --eeeeccCCeeeEeecCchHHHhhhcchhhccccChhhhhHHh---hhhheeEEEeeecCCCcEEEEeccCceEEeecC
Confidence 123468999999999987776655555667788876554431 123456889999999999999999999999864
Q ss_pred CCCeEEEEE---ecCCCCeEEEEEeCCC-----CEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEE
Q psy8748 1854 REKKCVQTF---FGHEADVNSVCFHPSG-----LAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYI 1925 (2004)
Q Consensus 1854 rs~k~I~tl---~~h~s~ItsIafSPdg-----~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~L 1925 (2004)
. ++....+ -+.+++|++++|+|.. ..+++.....++.+|.+. |+.+.+-. .-.-...|+.+.++|.|+
T Consensus 162 ~-gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r--~L~FdP~CisYf~NGEy~ 237 (1081)
T KOG1538|consen 162 N-GEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQLS-GKQIGKDR--ALNFDPCCISYFTNGEYI 237 (1081)
T ss_pred C-CCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEEec-ceeecccc--cCCCCchhheeccCCcEE
Confidence 3 3332233 2467899999999953 467788888888888876 44443221 112335788999999999
Q ss_pred EEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q psy8748 1926 FCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESN 1983 (2004)
Q Consensus 1926 aSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlst 1983 (2004)
..|+.|+.+++|- +.|..+.++......|+.++..|++++++.|+.||+|.-|++-.
T Consensus 238 LiGGsdk~L~~fT-R~GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GCqDGTiACyNl~f 294 (1081)
T KOG1538|consen 238 LLGGSDKQLSLFT-RDGVRLGTVGEQDSWIWTVQAKPNSQYVVVGCQDGTIACYNLIF 294 (1081)
T ss_pred EEccCCCceEEEe-ecCeEEeeccccceeEEEEEEccCCceEEEEEccCeeehhhhHH
Confidence 9999999999997 67888888877888999999999999999999999999998754
No 157
>KOG0307|consensus
Probab=99.72 E-value=1.5e-17 Score=214.35 Aligned_cols=288 Identities=18% Similarity=0.293 Sum_probs=223.0
Q ss_pred eEEEEeCCCC-EEEEEe----------CCCeEEEEECC--CCc----eEEEeeCCCCceEEEEEecCCCE----EEEeec
Q psy8748 1696 NSVHYSGDSR-HCVSGS----------LDGKLIIWDTW--TGN----KTQVIPLRSAWVMSVAFAQSGNF----VACGGM 1754 (2004)
Q Consensus 1696 tsLaFSPDG~-~LASGS----------~DGtIrVWDl~--Tgk----~l~ti~~Ht~~ItsLafSPdg~~----LaSGS~ 1754 (2004)
..++|+|++. ++++|. .+.++-+|.+. +.. .+..+. .....+.++|.+.|.. |+.|..
T Consensus 10 a~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~-s~~rF~kL~W~~~g~~~~GlIaGG~e 88 (1049)
T KOG0307|consen 10 ATFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQ-SSNRFNKLAWGSYGSHSHGLIAGGLE 88 (1049)
T ss_pred ceEEecCCCchhhHHHhhhhccccccccccccceeeecccCcccccccccccc-ccccceeeeecccCCCccceeecccc
Confidence 3678999887 555542 24556666443 322 222222 2345789999987765 888999
Q ss_pred CCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC--CCcEEEeecCCeEEEEECCCCceeEEe-eccccCCeEEEE
Q psy8748 1755 DNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID--DTTLLTGSGDMKIVTWNLETGQRIHEV-AQAHIGDVVSIS 1831 (2004)
Q Consensus 1755 DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd--d~~LlSgS~DGtI~IWDl~tg~~i~~i-l~~h~~~ItsLa 1831 (2004)
||.|.+|+............+.....|.+.|..+.|+. ++.+++|+.||.|.|||++.-+..... .....+.|.+++
T Consensus 89 dG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~ls 168 (1049)
T KOG0307|consen 89 DGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLS 168 (1049)
T ss_pred CCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEec
Confidence 99999999876433345666778889999999999984 457999999999999999875544333 223567899999
Q ss_pred ECCC-CCEEEEEECCCeEEEEECCCCeEEEEEecCCC--CeEEEEEeCCC-CEEEEEECCC---eEEEEEccCCceeEEE
Q psy8748 1832 LSPD-GQYFVTGSVDKSCKLWDFREKKCVQTFFGHEA--DVNSVCFHPSG-LAFATGSEDK---TARLFDIRADQQIATY 1904 (2004)
Q Consensus 1832 fSPd-g~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s--~ItsIafSPdg-~~LaSgS~DG---tIrIWDLrtgk~i~t~ 1904 (2004)
|+.. ...|++++.+|.+.|||++..+.+..+..+.. .+..+.|+|++ ..+++++.|. .|.+||+|.-....+.
T Consensus 169 WNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDlR~assP~k~ 248 (1049)
T KOG0307|consen 169 WNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDLRFASSPLKI 248 (1049)
T ss_pred cchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecccccCCchhh
Confidence 9874 45788899999999999999988877765544 47789999976 3466666654 5999999865544333
Q ss_pred cCCCCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCC-EEEEEECCCeEEEEECC
Q psy8748 1905 LPPNKNSGFTSCAVSSSG-RYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGM-ALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1905 ~~~~~~s~ItsLafSPdG-~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~-~LaSgS~DGtIrIWdls 1982 (2004)
. .+|..+|.++.|++.+ +++++++.|++|.+|+..+++.+..+....+.+..+.|+|... .++.++-||.|.||.+.
T Consensus 249 ~-~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~ 327 (1049)
T KOG0307|consen 249 L-EGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKISIYSLQ 327 (1049)
T ss_pred h-cccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccceeeeeee
Confidence 2 5778899999999965 8999999999999999999999999998889999999999665 78888999999999998
Q ss_pred CCe
Q psy8748 1983 NTI 1985 (2004)
Q Consensus 1983 tg~ 1985 (2004)
++.
T Consensus 328 ~~~ 330 (1049)
T KOG0307|consen 328 GTD 330 (1049)
T ss_pred cCC
Confidence 764
No 158
>KOG0302|consensus
Probab=99.72 E-value=2.1e-16 Score=184.00 Aligned_cols=248 Identities=18% Similarity=0.246 Sum_probs=191.1
Q ss_pred cccccccceeEEEEeCCC--CEEEEEeCCCeEEEEECC----------------CCceEEEeeCCCCceEEEEEecC-CC
Q psy8748 1687 SLKGHINKVNSVHYSGDS--RHCVSGSLDGKLIIWDTW----------------TGNKTQVIPLRSAWVMSVAFAQS-GN 1747 (2004)
Q Consensus 1687 sL~GHt~~VtsLaFSPDG--~~LASGS~DGtIrVWDl~----------------Tgk~l~ti~~Ht~~ItsLafSPd-g~ 1747 (2004)
..-+|.+.|+.+.-++-+ .+.++-+..|.|.|||+. ..+.+.++.+|.+.=++++|+|- ..
T Consensus 146 ~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g 225 (440)
T KOG0302|consen 146 KSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTG 225 (440)
T ss_pred cccccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccc
Confidence 445688999998888754 467777889999999974 23556778899999999999994 34
Q ss_pred EEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC--CCcEEEeecCCeEEEEECCCCce-eEEeecccc
Q psy8748 1748 FVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID--DTTLLTGSGDMKIVTWNLETGQR-IHEVAQAHI 1824 (2004)
Q Consensus 1748 ~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd--d~~LlSgS~DGtI~IWDl~tg~~-i~~il~~h~ 1824 (2004)
.+++|..-+.|++|...++. -..-...+.+|...|..+.|++ ++.|++|+.||.|+|||++.+.. .....+.|.
T Consensus 226 ~LlsGDc~~~I~lw~~~~g~---W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~ 302 (440)
T KOG0302|consen 226 RLLSGDCVKGIHLWEPSTGS---WKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHN 302 (440)
T ss_pred ccccCccccceEeeeeccCc---eeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccC
Confidence 58888888999999988753 1222345667999999999985 45699999999999999998832 222347899
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCC---CeEEEEEecCCCCeEEEEEeC-CCCEEEEEECCCeEEEEEccCCce
Q psy8748 1825 GDVVSISLSPDGQYFVTGSVDKSCKLWDFRE---KKCVQTFFGHEADVNSVCFHP-SGLAFATGSEDKTARLFDIRADQQ 1900 (2004)
Q Consensus 1825 ~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs---~k~I~tl~~h~s~ItsIafSP-dg~~LaSgS~DGtIrIWDLrtgk~ 1900 (2004)
+.|.-+.|+....+|++|+.||+++|||+++ ++++..++.|..+|+++.|+| +...|++++.|..|.+||+....-
T Consensus 303 sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D 382 (440)
T KOG0302|consen 303 SDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEAD 382 (440)
T ss_pred CceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCC
Confidence 9999999999888999999999999999985 567899999999999999999 456788899999999999853221
Q ss_pred ----------------eEEEcCCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEE
Q psy8748 1901 ----------------IATYLPPNKNSGFTSCAVSSS-GRYIFCGSDDNNVHVWD 1938 (2004)
Q Consensus 1901 ----------------i~t~~~~~~~s~ItsLafSPd-G~~LaSGSsDGsIrIWD 1938 (2004)
...+..+.....+..+.|++. ..++++.+.|| +.||.
T Consensus 383 ~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVfk 436 (440)
T KOG0302|consen 383 EEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVFK 436 (440)
T ss_pred hhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc-eeEEE
Confidence 001111222345677889885 34677777777 55553
No 159
>KOG0322|consensus
Probab=99.72 E-value=1.2e-16 Score=179.43 Aligned_cols=289 Identities=16% Similarity=0.238 Sum_probs=208.0
Q ss_pred ccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEee-CCCCceEEEEEecCCCEEEEeecCCeEEE
Q psy8748 1682 LMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIP-LRSAWVMSVAFAQSGNFVACGGMDNMCTV 1760 (2004)
Q Consensus 1682 ~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~-~Ht~~ItsLafSPdg~~LaSGS~DGtIrV 1760 (2004)
..|..+|++|.+.|+++.|..+++ |.+|..-|.|++|++.+.+....+. .+...|+.+.--|+ ..+.+-+.|+.+.+
T Consensus 4 PdP~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~l 81 (323)
T KOG0322|consen 4 PDPFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLIL 81 (323)
T ss_pred CCCeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEE
Confidence 346778889999999999988775 8999999999999999998888888 56778888888876 67888999999999
Q ss_pred EEcCCCCCCCcceEEEEEecCccceeeeEEe-----CCC----c-EEEeecCC-eEEEEECCCCceeEEe---eccccCC
Q psy8748 1761 YDLNNRDSTGAAKVIRELLGYEGFLSSCRFI-----DDT----T-LLTGSGDM-KIVTWNLETGQRIHEV---AQAHIGD 1826 (2004)
Q Consensus 1761 WDl~t~~~~~~~k~i~sl~gh~~~Vssvafs-----dd~----~-LlSgS~DG-tI~IWDl~tg~~i~~i---l~~h~~~ 1826 (2004)
|++.... .-.+..+ .+.++.|. .+. . ++.-+... .+.+-|......+... ..+..+.
T Consensus 82 w~ia~s~----~i~i~Si-----~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgs 152 (323)
T KOG0322|consen 82 WTIAYSA----FISIHSI-----VVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGS 152 (323)
T ss_pred EEccCcc----eEEEeee-----eccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCc
Confidence 9997532 1222221 12222221 111 1 11111110 1122222111111000 1234566
Q ss_pred eEEEEECC-CCC--EEEEEECCCeEEEEECCCCeEE----------EEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEE
Q psy8748 1827 VVSISLSP-DGQ--YFVTGSVDKSCKLWDFREKKCV----------QTFFGHEADVNSVCFHPSGLAFATGSEDKTARLF 1893 (2004)
Q Consensus 1827 ItsLafSP-dg~--~LaSGS~DGsIrIWDlrs~k~I----------~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIW 1893 (2004)
++|..+.. ++. ++++|..+|.+.+||+.++..+ .....|..+|.++.+.+.-..=++|+.+..+..|
T Consensus 153 vmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~ 232 (323)
T KOG0322|consen 153 VMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMY 232 (323)
T ss_pred eeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceee
Confidence 77777544 333 5678889999999999987433 3334688999999998866666788888889999
Q ss_pred EccCC--ceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEE
Q psy8748 1894 DIRAD--QQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSS 1971 (2004)
Q Consensus 1894 DLrtg--k~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS 1971 (2004)
++... .........-.+.++..+.+-||++.+|+++.||+||||+.++..++..++.|.+.|.+++|+|+...+|+++
T Consensus 233 Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaas 312 (323)
T KOG0322|consen 233 SLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAAS 312 (323)
T ss_pred eeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhcc
Confidence 88643 2211111112235688899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEEC
Q psy8748 1972 WDQFVKVWQE 1981 (2004)
Q Consensus 1972 ~DGtIrIWdl 1981 (2004)
.|++|.+|++
T Consensus 313 kD~rISLWkL 322 (323)
T KOG0322|consen 313 KDARISLWKL 322 (323)
T ss_pred CCceEEeeec
Confidence 9999999986
No 160
>KOG2919|consensus
Probab=99.71 E-value=7.6e-16 Score=176.52 Aligned_cols=275 Identities=20% Similarity=0.233 Sum_probs=209.4
Q ss_pred eeEEEEeCCCCEEEEEeCCCeEEEEECCCC----c--------eEEEee-CCCCceEEEEEe-------cCCCEEEEeec
Q psy8748 1695 VNSVHYSGDSRHCVSGSLDGKLIIWDTWTG----N--------KTQVIP-LRSAWVMSVAFA-------QSGNFVACGGM 1754 (2004)
Q Consensus 1695 VtsLaFSPDG~~LASGS~DGtIrVWDl~Tg----k--------~l~ti~-~Ht~~ItsLafS-------Pdg~~LaSGS~ 1754 (2004)
...+.|+|||..|++-+.|..+.+|++... + ....++ .....|...+|- |+.+++++.+.
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr 131 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR 131 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence 346889999999999999999999987421 0 011111 234568888885 56789999999
Q ss_pred CCeEEEEEcCCCCCCCcceEEEEEecCcc---ceeeeEEeCCCcEEEeecCCeEEEEEC-CCCceeEE---e---ecccc
Q psy8748 1755 DNMCTVYDLNNRDSTGAAKVIRELLGYEG---FLSSCRFIDDTTLLTGSGDMKIVTWNL-ETGQRIHE---V---AQAHI 1824 (2004)
Q Consensus 1755 DGtIrVWDl~t~~~~~~~k~i~sl~gh~~---~Vssvafsdd~~LlSgS~DGtI~IWDl-~tg~~i~~---i---l~~h~ 1824 (2004)
+.-|++||.-+++..... ....|.. ...++.|++++.-+.++....|+++|+ +.|..... . ..+..
T Consensus 132 ~~PIh~wdaftG~lraSy----~~ydh~de~taAhsL~Fs~DGeqlfaGykrcirvFdt~RpGr~c~vy~t~~~~k~gq~ 207 (406)
T KOG2919|consen 132 DQPIHLWDAFTGKLRASY----RAYDHQDEYTAAHSLQFSPDGEQLFAGYKRCIRVFDTSRPGRDCPVYTTVTKGKFGQK 207 (406)
T ss_pred cCceeeeeccccccccch----hhhhhHHhhhhheeEEecCCCCeEeecccceEEEeeccCCCCCCcchhhhhccccccc
Confidence 999999999876432222 2222322 345788988888777888899999999 44432211 1 12346
Q ss_pred CCeEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEEC-CCeEEEEEccCCce-e
Q psy8748 1825 GDVVSISLSP-DGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSE-DKTARLFDIRADQQ-I 1901 (2004)
Q Consensus 1825 ~~ItsLafSP-dg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~-DGtIrIWDLrtgk~-i 1901 (2004)
+-|.|++|+| +.+.+++|+....+-||.-..+.++..+.+|.+.|+.++|.++|+.|++|.. |.+|..||++..+. +
T Consensus 208 giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv 287 (406)
T KOG2919|consen 208 GIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPV 287 (406)
T ss_pred ceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchh
Confidence 7789999999 4559999999999999998889999999999999999999999999999886 67899999986543 2
Q ss_pred EEEcCCCC-CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeeeEEEccCCCCeEEEEEcCCCCEEEEEECC
Q psy8748 1902 ATYLPPNK-NSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLK-TTHNGVLSGHENRVTSISLSPNGMALVTSSWD 1973 (2004)
Q Consensus 1902 ~t~~~~~~-~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~t-ge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~D 1973 (2004)
..+..+.. ...-.-....|+|++|++|+.||.|++||+++ +..+..+..|+..++.++++|--.++++++..
T Consensus 288 ~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGq 361 (406)
T KOG2919|consen 288 YALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQ 361 (406)
T ss_pred hhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCc
Confidence 22221111 12233456778999999999999999999988 77788888899999999999998888888744
No 161
>KOG1240|consensus
Probab=99.70 E-value=1.6e-15 Score=195.17 Aligned_cols=306 Identities=19% Similarity=0.294 Sum_probs=219.8
Q ss_pred CCCCcccccccccccccccceeEEEEeCCC-CEEEEEeCCCeEEEEECCCC-------ceEEEeeCCCCceEEEEEecCC
Q psy8748 1675 PDAPKVKLMPKKSLKGHINKVNSVHYSGDS-RHCVSGSLDGKLIIWDTWTG-------NKTQVIPLRSAWVMSVAFAQSG 1746 (2004)
Q Consensus 1675 ~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG-~~LASGS~DGtIrVWDl~Tg-------k~l~ti~~Ht~~ItsLafSPdg 1746 (2004)
+.+++.++..+..|..|...|..++.++.. .+++|||.||+|++||...- +...++......+.++...+.+
T Consensus 1031 ~~gW~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~ 1110 (1431)
T KOG1240|consen 1031 PPGWNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNG 1110 (1431)
T ss_pred CCCCCccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCC
Confidence 334566777888999999999999998655 89999999999999997642 2233445467889999999999
Q ss_pred CEEEEeecCCeEEEEEcCCCCCCC-cceEE--EEEecCccceeeeEEe--CCC-cEEEeecCCeEEEEECCCCceeEEe-
Q psy8748 1747 NFVACGGMDNMCTVYDLNNRDSTG-AAKVI--RELLGYEGFLSSCRFI--DDT-TLLTGSGDMKIVTWNLETGQRIHEV- 1819 (2004)
Q Consensus 1747 ~~LaSGS~DGtIrVWDl~t~~~~~-~~k~i--~sl~gh~~~Vssvafs--dd~-~LlSgS~DGtI~IWDl~tg~~i~~i- 1819 (2004)
+.+++++.||.|.+.+++...... ..... ......+..+..-+|. ... .++.++..+.|..||.+........
T Consensus 1111 ~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk 1190 (1431)
T KOG1240|consen 1111 DQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLK 1190 (1431)
T ss_pred CeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhh
Confidence 999999999999999998632111 11111 1122222333333343 233 6888999999999999876654333
Q ss_pred eccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEe-cCCCCeEEEEEeCCC---CEEEEEE--CCCeEEEE
Q psy8748 1820 AQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFF-GHEADVNSVCFHPSG---LAFATGS--EDKTARLF 1893 (2004)
Q Consensus 1820 l~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~-~h~s~ItsIafSPdg---~~LaSgS--~DGtIrIW 1893 (2004)
.....|.|++++.+|.++++++|+..|.+.+||++-+.++..+. ++..+|+.+..+|-. ...++++ ..+.|.+|
T Consensus 1191 ~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~w 1270 (1431)
T KOG1240|consen 1191 NQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTW 1270 (1431)
T ss_pred cCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeee
Confidence 23345789999999999999999999999999999998887764 455788888887732 3444444 46789999
Q ss_pred EccCCceeEEEcCC-----------------CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee-----------
Q psy8748 1894 DIRADQQIATYLPP-----------------NKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHN----------- 1945 (2004)
Q Consensus 1894 DLrtgk~i~t~~~~-----------------~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l----------- 1945 (2004)
++.+|.+...+... .+.-....+.+...+.++.+|+.|+.|+.||....+..
T Consensus 1271 n~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~ 1350 (1431)
T KOG1240|consen 1271 NMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSY 1350 (1431)
T ss_pred ecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccc
Confidence 99998776665332 11112334455556778999999999999997321111
Q ss_pred -------------------------------------EEE--------ccCCCCeEEEEEcCC-CCEEEEEECCCeEEEE
Q psy8748 1946 -------------------------------------GVL--------SGHENRVTSISLSPN-GMALVTSSWDQFVKVW 1979 (2004)
Q Consensus 1946 -------------------------------------~tL--------~gHs~~VtsLaFSPD-g~~LaSgS~DGtIrIW 1979 (2004)
... ..|.+.|+++++... ..+|++++.||.|+||
T Consensus 1351 ~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiW 1430 (1431)
T KOG1240|consen 1351 STNSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIW 1430 (1431)
T ss_pred cccchhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeec
Confidence 000 137778999988653 4689999999999999
Q ss_pred E
Q psy8748 1980 Q 1980 (2004)
Q Consensus 1980 d 1980 (2004)
.
T Consensus 1431 k 1431 (1431)
T KOG1240|consen 1431 K 1431 (1431)
T ss_pred C
Confidence 4
No 162
>KOG0270|consensus
Probab=99.70 E-value=4.9e-16 Score=184.37 Aligned_cols=211 Identities=19% Similarity=0.311 Sum_probs=165.9
Q ss_pred cccccccceeEEEEeCCC-CEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecC-CCEEEEeecCCeEEEEEcC
Q psy8748 1687 SLKGHINKVNSVHYSGDS-RHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQS-GNFVACGGMDNMCTVYDLN 1764 (2004)
Q Consensus 1687 sL~GHt~~VtsLaFSPDG-~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPd-g~~LaSGS~DGtIrVWDl~ 1764 (2004)
.-.+|++.|.+++|+.+- ..||+||.|.+|++||+.+|++..++..|+..|.++.|+|. ..+|++|+.||+|.+.|.+
T Consensus 238 ~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R 317 (463)
T KOG0270|consen 238 SASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCR 317 (463)
T ss_pred ccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeecc
Confidence 346799999999999754 47899999999999999999999999999999999999995 6789999999999999986
Q ss_pred CCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCC-CCEEEEEE
Q psy8748 1765 NRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPD-GQYFVTGS 1843 (2004)
Q Consensus 1765 t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPd-g~~LaSGS 1843 (2004)
.... . =+-| ...+.|-.++|+|. ...+++++
T Consensus 318 ~~~~-------------s----------------------~~~w-------------k~~g~VEkv~w~~~se~~f~~~t 349 (463)
T KOG0270|consen 318 DPSN-------------S----------------------GKEW-------------KFDGEVEKVAWDPHSENSFFVST 349 (463)
T ss_pred Cccc-------------c----------------------CceE-------------EeccceEEEEecCCCceeEEEec
Confidence 3110 0 0112 12356778888884 45788889
Q ss_pred CCCeEEEEECCCC-eEEEEEecCCCCeEEEEEeCC-CCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCC
Q psy8748 1844 VDKSCKLWDFREK-KCVQTFFGHEADVNSVCFHPS-GLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSS 1921 (2004)
Q Consensus 1844 ~DGsIrIWDlrs~-k~I~tl~~h~s~ItsIafSPd-g~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPd 1921 (2004)
.||+++-+|+|.. +++.++..|.++|.++++++. ...+++++.|+.|++|++............-.-+...|.++.|+
T Consensus 350 ddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~ 429 (463)
T KOG0270|consen 350 DDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPD 429 (463)
T ss_pred CCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCC
Confidence 9999999999975 899999999999999999984 45788999999999999875544332222222234667778886
Q ss_pred C-CEEEEEeCCCeEEEEECCCCeee
Q psy8748 1922 G-RYIFCGSDDNNVHVWDLLKTTHN 1945 (2004)
Q Consensus 1922 G-~~LaSGSsDGsIrIWDL~tge~l 1945 (2004)
- -+++.|+..+.++|||+.+...+
T Consensus 430 ~a~~la~GG~k~~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 430 VAFTLAFGGEKAVLRVWDIFTNSPV 454 (463)
T ss_pred cceEEEecCccceEEEeecccChhH
Confidence 4 46778888889999999776554
No 163
>KOG4328|consensus
Probab=99.69 E-value=1e-15 Score=182.01 Aligned_cols=279 Identities=20% Similarity=0.233 Sum_probs=214.2
Q ss_pred ECCCCceEEEeeCCCCceEEEEEecCC--CEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCC--Cc
Q psy8748 1720 DTWTGNKTQVIPLRSAWVMSVAFAQSG--NFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD--TT 1795 (2004)
Q Consensus 1720 Dl~Tgk~l~ti~~Ht~~ItsLafSPdg--~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd--~~ 1795 (2004)
|+.+-.....++.+.+.|++++|+|.. +.+++|...|.|-+||+...+ .....+..+..|...|.++.|++. ..
T Consensus 172 ~l~~~~~~~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~--~d~d~v~~f~~hs~~Vs~l~F~P~n~s~ 249 (498)
T KOG4328|consen 172 DLDDYRILNVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQE--KDKDGVYLFTPHSGPVSGLKFSPANTSQ 249 (498)
T ss_pred ccccceecceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCC--CccCceEEeccCCccccceEecCCChhh
Confidence 344445555667788999999999964 588889999999999996332 233455677889999999999954 56
Q ss_pred EEEeecCCeEEEEECCCCceeEEeec--cccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeE-EEEEecCCCCeEEE
Q psy8748 1796 LLTGSGDMKIVTWNLETGQRIHEVAQ--AHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKC-VQTFFGHEADVNSV 1872 (2004)
Q Consensus 1796 LlSgS~DGtI~IWDl~tg~~i~~il~--~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~-I~tl~~h~s~ItsI 1872 (2004)
+++.+.||+|+.-|++.+..- .++. .....+.++.|+.+...++.|+.=|...+||++.+.. ...+.-|...|.++
T Consensus 250 i~ssSyDGtiR~~D~~~~i~e-~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv 328 (498)
T KOG4328|consen 250 IYSSSYDGTIRLQDFEGNISE-EVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSV 328 (498)
T ss_pred eeeeccCceeeeeeecchhhH-HHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhccccee
Confidence 999999999999999876432 1111 2344567788888888888888888999999997765 56667788899999
Q ss_pred EEeCCC-CEEEEEECCCeEEEEEccCCceeE--EEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC----CCCeee
Q psy8748 1873 CFHPSG-LAFATGSEDKTARLFDIRADQQIA--TYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL----LKTTHN 1945 (2004)
Q Consensus 1873 afSPdg-~~LaSgS~DGtIrIWDLrtgk~i~--t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL----~tge~l 1945 (2004)
+++|.. .++++++.|++.+|||++.-.... .+..-.|...|.+..|||+|-.|++.+.|..|+|||. ....+.
T Consensus 329 ~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~ 408 (498)
T KOG4328|consen 329 ALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPL 408 (498)
T ss_pred ecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCcc
Confidence 999954 568999999999999998644333 2444577788999999998888999999999999998 344444
Q ss_pred EEEccCCC------CeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEEeecCCCCcccccC
Q psy8748 1946 GVLSGHEN------RVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCVN 2004 (2004)
Q Consensus 1946 ~tL~gHs~------~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik~~~~h~~~VtsVN 2004 (2004)
..+. |.. ......|.|+..++++|..-..|-|||-++++.. .+.+.....+|.|+|
T Consensus 409 ~~I~-Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v--~el~~P~~~tI~~vn 470 (498)
T KOG4328|consen 409 GTIP-HNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMV--CELHDPESSTIPSVN 470 (498)
T ss_pred ceee-ccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEe--eeccCccccccccce
Confidence 4443 221 2455689999999999999999999999998633 344555566777765
No 164
>KOG1517|consensus
Probab=99.69 E-value=1.5e-15 Score=192.39 Aligned_cols=295 Identities=15% Similarity=0.229 Sum_probs=221.4
Q ss_pred ccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCC---CCceEEEEEec--CCCEEEEeecCCeEEEEE
Q psy8748 1688 LKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLR---SAWVMSVAFAQ--SGNFVACGGMDNMCTVYD 1762 (2004)
Q Consensus 1688 L~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~H---t~~ItsLafSP--dg~~LaSGS~DGtIrVWD 1762 (2004)
+.+....-..+.|+|-...++++...-.|+|||.+.++....|..+ ...|+.+++-. |...+++|+.||.|+||+
T Consensus 1060 ~~~n~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~~~~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk 1139 (1387)
T KOG1517|consen 1060 MTGNNQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGAFPDTRVSDLELINEQDDALLLTASSDGVIRIWK 1139 (1387)
T ss_pred HhcCCCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCCCCCCccceeeeecccchhheeeeccCceEEEec
Confidence 3344446678889999999999987789999999999998887654 46789999865 456899999999999997
Q ss_pred cCCCCCCCcceEEEEEec-------CccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC
Q psy8748 1763 LNNRDSTGAAKVIRELLG-------YEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP 1834 (2004)
Q Consensus 1763 l~t~~~~~~~k~i~sl~g-------h~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP 1834 (2004)
--.... ...+.+....+ ..+.-.-+.|. ..+.++++|+-..|+|||.........+..+....|+++.-+-
T Consensus 1140 ~y~~~~-~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~ 1218 (1387)
T KOG1517|consen 1140 DYADKW-KKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADL 1218 (1387)
T ss_pred cccccc-CCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccc
Confidence 532210 12222222222 11222233444 4567888888899999999998888777777777788876654
Q ss_pred -CCCEEEEEECCCeEEEEECCCCe---EEEEEecCCCC--eEEEEEeCCCCE-EEEEECCCeEEEEEccCCceeEEEcCC
Q psy8748 1835 -DGQYFVTGSVDKSCKLWDFREKK---CVQTFFGHEAD--VNSVCFHPSGLA-FATGSEDKTARLFDIRADQQIATYLPP 1907 (2004)
Q Consensus 1835 -dg~~LaSGS~DGsIrIWDlrs~k---~I~tl~~h~s~--ItsIafSPdg~~-LaSgS~DGtIrIWDLrtgk~i~t~~~~ 1907 (2004)
.|+.+++|..||.|++||.+... .+...+.|... |..+.+-+.|-. +++|+.||.|++||++.......+...
T Consensus 1219 ~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv 1298 (1387)
T KOG1517|consen 1219 VHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIV 1298 (1387)
T ss_pred cCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceee
Confidence 57999999999999999988543 46777888877 999999987654 999999999999999974222221111
Q ss_pred CC---CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEcc-------CCCCeEEEEEcCCCCEEEEEECCCeEE
Q psy8748 1908 NK---NSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSG-------HENRVTSISLSPNGMALVTSSWDQFVK 1977 (2004)
Q Consensus 1908 ~~---~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~g-------Hs~~VtsLaFSPDg~~LaSgS~DGtIr 1977 (2004)
.+ ++..+++..+++...+|+|+. +.|+||++ .|+.+..++. ..+.+.+++|+|..-.+|+|+.|.+|.
T Consensus 1299 ~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~-~G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~ 1376 (1387)
T KOG1517|consen 1299 AHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSL-SGEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVS 1376 (1387)
T ss_pred eccccCccceeeeeccCCCeeeecCc-ceEEEEec-ChhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCceEE
Confidence 11 235899999999999999998 99999997 4444444432 345689999999999999999999999
Q ss_pred EEECCCCe
Q psy8748 1978 VWQESNTI 1985 (2004)
Q Consensus 1978 IWdlstg~ 1985 (2004)
||...++.
T Consensus 1377 iYs~~k~~ 1384 (1387)
T KOG1517|consen 1377 IYSCEKPR 1384 (1387)
T ss_pred EeecCCcC
Confidence 99987753
No 165
>KOG1188|consensus
Probab=99.69 E-value=7.7e-16 Score=178.13 Aligned_cols=274 Identities=16% Similarity=0.254 Sum_probs=201.2
Q ss_pred CEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEec--CCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCc
Q psy8748 1705 RHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQ--SGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYE 1782 (2004)
Q Consensus 1705 ~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSP--dg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~ 1782 (2004)
..+|++...|.|++||..+|+.+..++++...+..+.|.. ....+.+|+.||+|++||++.... .......++.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e----~a~~~~~~~~ 116 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAE----SARISWTQQS 116 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchh----hhheeccCCC
Confidence 5688888999999999999999999999999999999987 467899999999999999987532 1122223333
Q ss_pred -cceeeeEEe-CCCcEEEee----cCCeEEEEECCCCce-eEEeeccccCCeEEEEECC-CCCEEEEEECCCeEEEEECC
Q psy8748 1783 -GFLSSCRFI-DDTTLLTGS----GDMKIVTWNLETGQR-IHEVAQAHIGDVVSISLSP-DGQYFVTGSVDKSCKLWDFR 1854 (2004)
Q Consensus 1783 -~~Vssvafs-dd~~LlSgS----~DGtI~IWDl~tg~~-i~~il~~h~~~ItsLafSP-dg~~LaSGS~DGsIrIWDlr 1854 (2004)
....++... .++.+++|+ .+-.|.+||++..+. +......|...|++++|+| +.+.|++|+.||-|.+||++
T Consensus 117 ~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~ 196 (376)
T KOG1188|consen 117 GTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTK 196 (376)
T ss_pred CCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecC
Confidence 345555554 344455554 356899999998877 6667789999999999999 56799999999999999997
Q ss_pred CCe---EEEEEecCCCCeEEEEEeCCC-CEEEEEECCCeEEEEEccCCceeEEEcCCCCC----------CCeEEEEEcC
Q psy8748 1855 EKK---CVQTFFGHEADVNSVCFHPSG-LAFATGSEDKTARLFDIRADQQIATYLPPNKN----------SGFTSCAVSS 1920 (2004)
Q Consensus 1855 s~k---~I~tl~~h~s~ItsIafSPdg-~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~----------s~ItsLafSP 1920 (2004)
... .+.....+...|.++.|..++ +.+++-+..++..+|+++.+.....+..+... ..+.......
T Consensus 197 ~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~~~~~ 276 (376)
T KOG1188|consen 197 KDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINEHSPG 276 (376)
T ss_pred CCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeecccCC
Confidence 543 233334677889999999877 45888888999999999988866555333111 1111121122
Q ss_pred CCCEEEEEeC-CCeEEEEECC---C---CeeeEEEcc-CCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1921 SGRYIFCGSD-DNNVHVWDLL---K---TTHNGVLSG-HENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1921 dG~~LaSGSs-DGsIrIWDL~---t---ge~l~tL~g-Hs~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
++...+.++. -|...++-+. + .+.+..+.+ |..-|.++.|...+.++.|||.||.+.+|..+
T Consensus 277 ~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk~~ 346 (376)
T KOG1188|consen 277 DKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWKVE 346 (376)
T ss_pred CcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEecC
Confidence 4445554444 5555555432 2 334455555 77788999999999999999999999999954
No 166
>KOG1009|consensus
Probab=99.68 E-value=4.1e-15 Score=175.16 Aligned_cols=316 Identities=19% Similarity=0.224 Sum_probs=211.2
Q ss_pred CeEEEEEccCCC-EEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCcchh
Q psy8748 1557 QRNAVSFHACST-LLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSSINI 1635 (2004)
Q Consensus 1557 ~VtsVsFSPdGk-~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgSidi 1635 (2004)
+|.++.|.+++. .||| |+.|..||||.+.. +. ++ +
T Consensus 15 pv~s~dfq~n~~~~laT-~G~D~~iriW~v~r-------------~~-----~~---------------------~---- 50 (434)
T KOG1009|consen 15 PVYSVDFQKNSLNKLAT-AGGDKDIRIWKVNR-------------SE-----PG---------------------G---- 50 (434)
T ss_pred ceEEEEeccCcccceec-ccCccceeeeeeee-------------cC-----CC---------------------C----
Confidence 799999999988 9999 99999999999977 00 00 0
Q ss_pred hhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEeCCCe
Q psy8748 1636 YLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGK 1715 (2004)
Q Consensus 1636 ~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGt 1715 (2004)
...+..-...|..|+..|+++.|+|+|..||+|+++|.
T Consensus 51 ------------------------------------------~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~ 88 (434)
T KOG1009|consen 51 ------------------------------------------GDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGE 88 (434)
T ss_pred ------------------------------------------CceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCce
Confidence 00112235678889999999999999999999999999
Q ss_pred EEEEECC--------C--------CceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEe
Q psy8748 1716 LIIWDTW--------T--------GNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELL 1779 (2004)
Q Consensus 1716 IrVWDl~--------T--------gk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~ 1779 (2004)
|.+|... + ........+|...|+.++|+|++.++++++.|..+++||+..+ .......
T Consensus 89 v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G------~l~~~~~ 162 (434)
T KOG1009|consen 89 VFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAG------QLLAILD 162 (434)
T ss_pred EEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccc------eeEeecc
Confidence 9999755 2 1223456789999999999999999999999999999999754 6677788
Q ss_pred cCccceeeeEEeCCC-cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeE
Q psy8748 1780 GYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKC 1858 (2004)
Q Consensus 1780 gh~~~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~ 1858 (2004)
.|...+..++|.+-+ ++++-+.|...+.+.+...+.+.... + ..+..-++++. .....++|.-++.
T Consensus 163 dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~--~-~~m~~~~~~~~--------e~~s~rLfhDeTl-- 229 (434)
T KOG1009|consen 163 DHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHG--L-DIMPAKAFNER--------EGKSTRLFHDETL-- 229 (434)
T ss_pred ccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeee--e-eEeeecccCCC--------CcceeeeeecCch--
Confidence 899999999998654 46667777766666655444332210 0 00001111110 1112233322211
Q ss_pred EEEEecCCCCeEEEEEeCCCCEEEEEEC----CCe-----EEEEEccCCce-eEEEcCCCCCCCeEEEEEcC--------
Q psy8748 1859 VQTFFGHEADVNSVCFHPSGLAFATGSE----DKT-----ARLFDIRADQQ-IATYLPPNKNSGFTSCAVSS-------- 1920 (2004)
Q Consensus 1859 I~tl~~h~s~ItsIafSPdg~~LaSgS~----DGt-----IrIWDLrtgk~-i~t~~~~~~~s~ItsLafSP-------- 1920 (2004)
..-...++|+|+|..+++... +|. .++|+-+..+. ...+ +........+.++|
T Consensus 230 -------ksFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~~l--p~~~k~~lavr~~pVy~elrp~ 300 (434)
T KOG1009|consen 230 -------KSFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAARL--PSPKKPALAVRFSPVYYELRPL 300 (434)
T ss_pred -------hhhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCceeec--CCCCcceEEEEeeeeEEEeccc
Confidence 112345667777777666432 222 23443322111 1111 11122233333332
Q ss_pred ----------CCCEEEEEeCCCeEEEEECCCCeeeEEEc-cCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEE
Q psy8748 1921 ----------SGRYIFCGSDDNNVHVWDLLKTTHNGVLS-GHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVW 1987 (2004)
Q Consensus 1921 ----------dG~~LaSGSsDGsIrIWDL~tge~l~tL~-gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~ 1987 (2004)
-+-.+++++ ...|++||..+..++.... -|-..|++++|++||..++..+.||...+-.++..++-
T Consensus 301 ~~~~~~~~lpyrlvfaiAt-~~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtfe~~elg 377 (434)
T KOG1009|consen 301 SSEKFLFVLPYRLVFAIAT-KNSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTFEPWELG 377 (434)
T ss_pred cccccccccccceEEEEee-cceEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEEcchhcc
Confidence 233455554 4579999999988887764 48899999999999999999999999998888776543
No 167
>KOG0302|consensus
Probab=99.68 E-value=1.5e-15 Score=177.01 Aligned_cols=246 Identities=22% Similarity=0.319 Sum_probs=187.9
Q ss_pred eCCCCceEEEEEecCC--CEEEEeecCCeEEEEEcCCCC----------CCCcceEEEEEecCccceeeeEEeC--CCcE
Q psy8748 1731 PLRSAWVMSVAFAQSG--NFVACGGMDNMCTVYDLNNRD----------STGAAKVIRELLGYEGFLSSCRFID--DTTL 1796 (2004)
Q Consensus 1731 ~~Ht~~ItsLafSPdg--~~LaSGS~DGtIrVWDl~t~~----------~~~~~k~i~sl~gh~~~Vssvafsd--d~~L 1796 (2004)
..|.+.+..+.-++-+ .+.++-+..|.|.||++...- .....+.+.++.+|.+.-..+.|++ .+.+
T Consensus 148 i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~~l~~~~~~~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~L 227 (440)
T KOG0302|consen 148 IPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLNALSEPGLEVKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRL 227 (440)
T ss_pred cccccccceeeecccCCcceeeeecccCcEEEEEchhhhhhhcCccccccccccCceEEecccCccceeeeccccccccc
Confidence 3466667666666644 355556778999999986421 1234566778888998889999986 4568
Q ss_pred EEeecCCeEEEEECCCCceeEE--eeccccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCC---eEEEEEecCCCCeE
Q psy8748 1797 LTGSGDMKIVTWNLETGQRIHE--VAQAHIGDVVSISLSP-DGQYFVTGSVDKSCKLWDFREK---KCVQTFFGHEADVN 1870 (2004)
Q Consensus 1797 lSgS~DGtI~IWDl~tg~~i~~--il~~h~~~ItsLafSP-dg~~LaSGS~DGsIrIWDlrs~---k~I~tl~~h~s~It 1870 (2004)
++|..-+.|++|...+|..... -+.+|...|-.++|+| ....|++|+.||+|+|||+|.+ .++. .+.|.+.|+
T Consensus 228 lsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~-~kAh~sDVN 306 (440)
T KOG0302|consen 228 LSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVS-TKAHNSDVN 306 (440)
T ss_pred ccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeE-eeccCCcee
Confidence 9999999999999988765432 2557999999999999 4568999999999999999987 3343 379999999
Q ss_pred EEEEeCCCCEEEEEECCCeEEEEEccCC---ceeEEEcCCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCe---
Q psy8748 1871 SVCFHPSGLAFATGSEDKTARLFDIRAD---QQIATYLPPNKNSGFTSCAVSS-SGRYIFCGSDDNNVHVWDLLKTT--- 1943 (2004)
Q Consensus 1871 sIafSPdg~~LaSgS~DGtIrIWDLrtg---k~i~t~~~~~~~s~ItsLafSP-dG~~LaSGSsDGsIrIWDL~tge--- 1943 (2004)
.|.|+..-.+|++|+.||+++|||+++. +.+..| ..|..+|+++.|+| +...|++++.|.+|.+||+....
T Consensus 307 VISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~f--k~Hk~pItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~e 384 (440)
T KOG0302|consen 307 VISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATF--KYHKAPITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEE 384 (440)
T ss_pred eEEccCCcceeeecCCCceEEEEEhhhccCCCcceeE--EeccCCeeEEEeccccCceEEeccCCCcEEEEEeeccCChh
Confidence 9999998889999999999999999864 455666 46778999999999 45678888999999999984211
Q ss_pred -------------eeEEEccC--CCCeEEEEEcCC-CCEEEEEECCCeEEEEE
Q psy8748 1944 -------------HNGVLSGH--ENRVTSISLSPN-GMALVTSSWDQFVKVWQ 1980 (2004)
Q Consensus 1944 -------------~l~tL~gH--s~~VtsLaFSPD-g~~LaSgS~DGtIrIWd 1980 (2004)
+.+.+--| ...|..+.|++. ..++++.+.|| +.||.
T Consensus 385 e~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dG-fnVfk 436 (440)
T KOG0302|consen 385 EIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDG-FNVFK 436 (440)
T ss_pred hhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEecccc-eeEEE
Confidence 11122234 346889999985 34678888888 55654
No 168
>KOG1034|consensus
Probab=99.68 E-value=3.5e-15 Score=171.77 Aligned_cols=287 Identities=20% Similarity=0.280 Sum_probs=216.1
Q ss_pred cccccccceeEEEEeC-----CCCEEEEEeCCCeEEEEECCCCc---eEEEee--CCCCceEEEEEecC----CCEEEEe
Q psy8748 1687 SLKGHINKVNSVHYSG-----DSRHCVSGSLDGKLIIWDTWTGN---KTQVIP--LRSAWVMSVAFAQS----GNFVACG 1752 (2004)
Q Consensus 1687 sL~GHt~~VtsLaFSP-----DG~~LASGS~DGtIrVWDl~Tgk---~l~ti~--~Ht~~ItsLafSPd----g~~LaSG 1752 (2004)
...+|..+|..++|++ ..+.+|++|. ..+.+|...... .++.+. .|......++|+-+ ..++++|
T Consensus 33 l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~ 111 (385)
T KOG1034|consen 33 LKEDHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAG 111 (385)
T ss_pred hhccCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEee
Confidence 4557899999999984 3346777765 478888765432 333332 36677888889764 3489999
Q ss_pred ecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCC--cEEEeecCCeEEEEECCCCceeEEe--eccccCCeE
Q psy8748 1753 GMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT--TLLTGSGDMKIVTWNLETGQRIHEV--AQAHIGDVV 1828 (2004)
Q Consensus 1753 S~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~--~LlSgS~DGtI~IWDl~tg~~i~~i--l~~h~~~It 1828 (2004)
|.-|.|+|.|+..+ +....+.+|...|..+.+.+.+ .+++++.|..|++||+++..++..+ ..+|.+.|.
T Consensus 112 G~~GvIrVid~~~~------~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVL 185 (385)
T KOG1034|consen 112 GYLGVIRVIDVVSG------QCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVL 185 (385)
T ss_pred cceeEEEEEecchh------hhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEE
Confidence 99999999999754 5667888999999999999766 7999999999999999999988555 468999999
Q ss_pred EEEECCCCCEEEEEECCCeEEEEECCCCeEEE----------------------------EEecCCCCeEEEEEeCCCCE
Q psy8748 1829 SISLSPDGQYFVTGSVDKSCKLWDFREKKCVQ----------------------------TFFGHEADVNSVCFHPSGLA 1880 (2004)
Q Consensus 1829 sLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~----------------------------tl~~h~s~ItsIafSPdg~~ 1880 (2004)
++.|+.+|.+++++|.|.+|++|++...+... +-.-|...|.|+.|. |++
T Consensus 186 SvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ 263 (385)
T KOG1034|consen 186 SVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDF 263 (385)
T ss_pred EEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccccccccccchHHHHHHH--hhh
Confidence 99999999999999999999999997322100 112356666777775 468
Q ss_pred EEEEECCCeEEEEEcc-CCce-------------eEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee-
Q psy8748 1881 FATGSEDKTARLFDIR-ADQQ-------------IATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHN- 1945 (2004)
Q Consensus 1881 LaSgS~DGtIrIWDLr-tgk~-------------i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l- 1945 (2004)
+++-+.++.|..|... -++. ...+..+...-.....+|++-+++||.|...|.|++||++..++.
T Consensus 264 ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~ 343 (385)
T KOG1034|consen 264 ILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPK 343 (385)
T ss_pred eeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCcc
Confidence 9998889999999872 1111 122222221222334566777899999999999999999877663
Q ss_pred -EEEc--cCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1946 -GVLS--GHENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1946 -~tL~--gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
.++. .....|...+|+.||..|+...+||+|.-||.-
T Consensus 344 ~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 344 CTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred CceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 1222 234579999999999999999999999999853
No 169
>KOG0307|consensus
Probab=99.66 E-value=5.1e-16 Score=200.46 Aligned_cols=245 Identities=16% Similarity=0.268 Sum_probs=196.0
Q ss_pred cceeEEEEeCCCCE----EEEEeCCCeEEEEECCC---C---ceEEEeeCCCCceEEEEEecCC-CEEEEeecCCeEEEE
Q psy8748 1693 NKVNSVHYSGDSRH----CVSGSLDGKLIIWDTWT---G---NKTQVIPLRSAWVMSVAFAQSG-NFVACGGMDNMCTVY 1761 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~----LASGS~DGtIrVWDl~T---g---k~l~ti~~Ht~~ItsLafSPdg-~~LaSGS~DGtIrVW 1761 (2004)
.+-+.++|.+.|.. ||.|..||.|.+||... + ..+.+...|++.|..+.|++.+ +.+++|+.||.|.||
T Consensus 65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iW 144 (1049)
T KOG0307|consen 65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIW 144 (1049)
T ss_pred ccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEe
Confidence 46779999987765 89999999999999765 2 3345667899999999999965 599999999999999
Q ss_pred EcCCCCCCCcceEEEEEecCccceeeeEEeCC--CcEEEeecCCeEEEEECCCCceeEEeecccc-CCeEEEEECCCCC-
Q psy8748 1762 DLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD--TTLLTGSGDMKIVTWNLETGQRIHEVAQAHI-GDVVSISLSPDGQ- 1837 (2004)
Q Consensus 1762 Dl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd--~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~-~~ItsLafSPdg~- 1837 (2004)
|+.+.+...... .....+.|.+++|... ..|++++.+|.+.|||++..+.+..+..... ..+..++|||++.
T Consensus 145 Dlnn~~tP~~~~----~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aT 220 (1049)
T KOG0307|consen 145 DLNKPETPFTPG----SQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHAT 220 (1049)
T ss_pred ccCCcCCCCCCC----CCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCce
Confidence 998754322221 2335678899999843 4588899999999999999877655533222 4578999999764
Q ss_pred EEEEEECCC---eEEEEECCCC-eEEEEEecCCCCeEEEEEeCCC-CEEEEEECCCeEEEEEccCCceeEEEcCCCCCCC
Q psy8748 1838 YFVTGSVDK---SCKLWDFREK-KCVQTFFGHEADVNSVCFHPSG-LAFATGSEDKTARLFDIRADQQIATYLPPNKNSG 1912 (2004)
Q Consensus 1838 ~LaSGS~DG---sIrIWDlrs~-k~I~tl~~h~s~ItsIafSPdg-~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ 1912 (2004)
.+++++.|. .|.+||+|.. .+++.+.+|...|.++.|++.+ .++++++.|++|.+|+.++++.+..+.. ...+
T Consensus 221 ql~~As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~--~~nW 298 (1049)
T KOG0307|consen 221 QLLVASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPA--QGNW 298 (1049)
T ss_pred eeeeecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCC--CCcc
Confidence 566666543 5999999854 4677788999999999999965 7899999999999999999999988843 5578
Q ss_pred eEEEEEcCCCC-EEEEEeCCCeEEEEECCCCe
Q psy8748 1913 FTSCAVSSSGR-YIFCGSDDNNVHVWDLLKTT 1943 (2004)
Q Consensus 1913 ItsLafSPdG~-~LaSGSsDGsIrIWDL~tge 1943 (2004)
+..+.|+|... .+++++-||.|.||.+....
T Consensus 299 ~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 299 CFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred eeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 99999999665 88899999999999986544
No 170
>KOG0270|consensus
Probab=99.66 E-value=7.6e-15 Score=174.42 Aligned_cols=283 Identities=18% Similarity=0.304 Sum_probs=199.9
Q ss_pred EEEEeCCCCEEEEEeCC---Ce--EEEEECCCCceEEEeeCC----CCceEEEEEec-------CCCEEEEeecCCeEEE
Q psy8748 1697 SVHYSGDSRHCVSGSLD---GK--LIIWDTWTGNKTQVIPLR----SAWVMSVAFAQ-------SGNFVACGGMDNMCTV 1760 (2004)
Q Consensus 1697 sLaFSPDG~~LASGS~D---Gt--IrVWDl~Tgk~l~ti~~H----t~~ItsLafSP-------dg~~LaSGS~DGtIrV 1760 (2004)
.+..-|+...++++-.+ .. ++||+-... .. +-.| ...-.|+.|.. .|++++.|+.|..|.|
T Consensus 130 e~~V~psDnlIl~ar~eddvs~LEvYVyn~~e~-nl--YvHHD~ilpafPLC~ewld~~~~~~~~gNyvAiGtmdp~IeI 206 (463)
T KOG0270|consen 130 EEQVKPSDNLILCARNEDDVSYLEVYVYNEEEE-NL--YVHHDFILPAFPLCIEWLDHGSKSGGAGNYVAIGTMDPEIEI 206 (463)
T ss_pred cceeccCCcEEEEeeccCCceEEEEEEEcCCCc-ce--eEecceeccCcchhhhhhhcCCCCCCCcceEEEeccCceeEE
Confidence 45555766777766543 22 455553221 11 1112 23345677743 2689999999999999
Q ss_pred EEcCCCCCCCcce---------------EEEEEecCccceeeeEEeC--CCcEEEeecCCeEEEEECCCCceeEEeeccc
Q psy8748 1761 YDLNNRDSTGAAK---------------VIRELLGYEGFLSSCRFID--DTTLLTGSGDMKIVTWNLETGQRIHEVAQAH 1823 (2004)
Q Consensus 1761 WDl~t~~~~~~~k---------------~i~sl~gh~~~Vssvafsd--d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h 1823 (2004)
||++-.....+.- ......+|.+.+..+.|.. .+.+++|+.|.+|++||+.++++...+ ..|
T Consensus 207 WDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~-~~~ 285 (463)
T KOG0270|consen 207 WDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSI-THH 285 (463)
T ss_pred eccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceeh-hhc
Confidence 9987533211111 0111235777777787774 456999999999999999999998544 578
Q ss_pred cCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCC-CEEEEEECCCeEEEEEccCC-ce
Q psy8748 1824 IGDVVSISLSP-DGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSG-LAFATGSEDKTARLFDIRAD-QQ 1900 (2004)
Q Consensus 1824 ~~~ItsLafSP-dg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg-~~LaSgS~DGtIrIWDLrtg-k~ 1900 (2004)
.+.|.++.|+| ....+++|+.||+|.+.|.|........-.-.+.|-.++|.|.. ..++++..||+|+-+|+|.. ++
T Consensus 286 ~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~ 365 (463)
T KOG0270|consen 286 GKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKP 365 (463)
T ss_pred CCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCceeEEEecCCceEEeeecCCCCCc
Confidence 99999999999 56789999999999999999533222222345789999999954 56888889999999999976 66
Q ss_pred eEEEcCCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEECCCCeeeEE--EccCCCCeEEEEEcCCCC-EEEEEECCCeE
Q psy8748 1901 IATYLPPNKNSGFTSCAVSSS-GRYIFCGSDDNNVHVWDLLKTTHNGV--LSGHENRVTSISLSPNGM-ALVTSSWDQFV 1976 (2004)
Q Consensus 1901 i~t~~~~~~~s~ItsLafSPd-G~~LaSGSsDGsIrIWDL~tge~l~t--L~gHs~~VtsLaFSPDg~-~LaSgS~DGtI 1976 (2004)
+.+. ..|..+|.+++++.. -.++++++.|+.|++|++........ -...-++..|.++.|+-. .++.||..+.+
T Consensus 366 vwt~--~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~ 443 (463)
T KOG0270|consen 366 VWTL--KAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVL 443 (463)
T ss_pred eeEE--EeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCCcceEEEecCccceE
Confidence 6666 567789999999984 46788999999999999864433211 111123467777777654 57778888899
Q ss_pred EEEECCCCe
Q psy8748 1977 KVWQESNTI 1985 (2004)
Q Consensus 1977 rIWdlstg~ 1985 (2004)
+|||+.+..
T Consensus 444 ~vwd~~~~~ 452 (463)
T KOG0270|consen 444 RVWDIFTNS 452 (463)
T ss_pred EEeecccCh
Confidence 999998764
No 171
>KOG1963|consensus
Probab=99.66 E-value=3.4e-14 Score=180.19 Aligned_cols=287 Identities=15% Similarity=0.243 Sum_probs=207.0
Q ss_pred cccccceeEEEEeCCCCEEEEEeCCCeEEEEECCC--C--ceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcC
Q psy8748 1689 KGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWT--G--NKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLN 1764 (2004)
Q Consensus 1689 ~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~T--g--k~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~ 1764 (2004)
..|+..++|.++||+++++|+|..||.|.+|.--. + ...+.++-|...|.++.|+++|.+|.+||..|.+.+|.+.
T Consensus 202 ~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~ 281 (792)
T KOG1963|consen 202 VHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLE 281 (792)
T ss_pred hhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeec
Confidence 35788899999999999999999999999995322 2 3445678899999999999999999999999999999998
Q ss_pred CCCCCCcceEEEEEecCccceeeeEEeCCC-cEEEeecCCeEEEEECCCCceeEEe----------eccccCCeEEEEEC
Q psy8748 1765 NRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQRIHEV----------AQAHIGDVVSISLS 1833 (2004)
Q Consensus 1765 t~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~~i~~i----------l~~h~~~ItsLafS 1833 (2004)
+++ .+-+..-.+.+..+.+++++ .......|..|.+....+......+ .....+-.+.++++
T Consensus 282 T~~-------kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~id 354 (792)
T KOG1963|consen 282 TGK-------KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSID 354 (792)
T ss_pred CCC-------cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEc
Confidence 753 23344456788888888554 5667788999999877554332221 11124456778999
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeEEEEEe-----c------CCCCeEEEEEeCCCCEEEEEEC--------CC--eEEE
Q psy8748 1834 PDGQYFVTGSVDKSCKLWDFREKKCVQTFF-----G------HEADVNSVCFHPSGLAFATGSE--------DK--TARL 1892 (2004)
Q Consensus 1834 Pdg~~LaSGS~DGsIrIWDlrs~k~I~tl~-----~------h~s~ItsIafSPdg~~LaSgS~--------DG--tIrI 1892 (2004)
|..+.++-.+..|.|.+||+-+...+..+. . +...++.++.+-.|+++++.-. || .+++
T Consensus 355 pr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e~~LKF 434 (792)
T KOG1963|consen 355 PRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGEVSLKF 434 (792)
T ss_pred CCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCceEEEEE
Confidence 977788888899999999998776655543 1 1234677777778988888642 33 4778
Q ss_pred EEccCCce----eEEEcCCCCCCCeEE-EEEcCCCC-EEEEEeCCCeEEEEECCC----------CeeeEEEccCCCCeE
Q psy8748 1893 FDIRADQQ----IATYLPPNKNSGFTS-CAVSSSGR-YIFCGSDDNNVHVWDLLK----------TTHNGVLSGHENRVT 1956 (2004)
Q Consensus 1893 WDLrtgk~----i~t~~~~~~~s~Its-LafSPdG~-~LaSGSsDGsIrIWDL~t----------ge~l~tL~gHs~~Vt 1956 (2004)
|-...... ...+.. +|...+.. +..++... ..++++.||.++||-+.. +.+...-.-|..+++
T Consensus 435 W~~n~~~kt~~L~T~I~~-PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~ 513 (792)
T KOG1963|consen 435 WQYNPNSKTFILNTKINN-PHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSYHKTPIT 513 (792)
T ss_pred EEEcCCcceeEEEEEEec-CCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeeccccCccc
Confidence 87654332 233333 34444443 44444333 789999999999998732 233333334789999
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1957 SISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1957 sLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
..+|+.||. +++++.|++|.+||..+.
T Consensus 514 a~~fs~dGs-lla~s~~~~Itiwd~~~~ 540 (792)
T KOG1963|consen 514 ALCFSQDGS-LLAVSFDDTITIWDYDTK 540 (792)
T ss_pred chhhcCCCc-EEEEecCCEEEEecCCCh
Confidence 999999996 555666889999999883
No 172
>KOG4227|consensus
Probab=99.66 E-value=5.7e-15 Score=171.35 Aligned_cols=295 Identities=19% Similarity=0.245 Sum_probs=217.1
Q ss_pred cccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCC------CceEEEee-CCCCceEEEEEecCCCEEEEeecC
Q psy8748 1683 MPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWT------GNKTQVIP-LRSAWVMSVAFAQSGNFVACGGMD 1755 (2004)
Q Consensus 1683 ~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~T------gk~l~ti~-~Ht~~ItsLafSPdg~~LaSGS~D 1755 (2004)
.+.+.+.+|.+.|+++.||.++++|++||.|..+++|++.. .+.+.... .|...|.|++|...+.++++|+.+
T Consensus 47 ~~qKD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~ 126 (609)
T KOG4227|consen 47 FCQKDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERW 126 (609)
T ss_pred hhhhhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCc
Confidence 35667889999999999999999999999999999998753 24444433 356899999999999999999999
Q ss_pred CeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC-CCcEEEeecCCeEEEEECCCCce-eEEe-eccccCCeEEEEE
Q psy8748 1756 NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID-DTTLLTGSGDMKIVTWNLETGQR-IHEV-AQAHIGDVVSISL 1832 (2004)
Q Consensus 1756 GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd-d~~LlSgS~DGtI~IWDl~tg~~-i~~i-l~~h~~~ItsLaf 1832 (2004)
|+|...|+++.+. -.+.......+.|..+..++ ++.+++.+.+|.|.+||.+.... ...+ .........++.|
T Consensus 127 ~~VI~HDiEt~qs----i~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F 202 (609)
T KOG4227|consen 127 GTVIKHDIETKQS----IYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEF 202 (609)
T ss_pred ceeEeeeccccee----eeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeee
Confidence 9999999986531 11112222344677776664 56789999999999999987652 2111 2234556788899
Q ss_pred CCC-CCEEEEEECCCeEEEEECCCCeE-EEE---EecC---CCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEE
Q psy8748 1833 SPD-GQYFVTGSVDKSCKLWDFREKKC-VQT---FFGH---EADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATY 1904 (2004)
Q Consensus 1833 SPd-g~~LaSGS~DGsIrIWDlrs~k~-I~t---l~~h---~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~ 1904 (2004)
+|. ..+|++.+..|.+.+||.+.... +.. +.+. ...-.++.|+|+|+.|++--....-..||+.+.++....
T Consensus 203 ~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~V~k 282 (609)
T KOG4227|consen 203 HPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCFVLK 282 (609)
T ss_pred cCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccceeEe
Confidence 995 45778888889999999985432 111 1111 223367889999999998877777788898875554322
Q ss_pred cCCCC-----CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC----------C-------------eeeEEEccCCCCeE
Q psy8748 1905 LPPNK-----NSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLK----------T-------------THNGVLSGHENRVT 1956 (2004)
Q Consensus 1905 ~~~~~-----~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~t----------g-------------e~l~tL~gHs~~Vt 1956 (2004)
..++. ...+.+++|..|.. +++|+.+-.|++|.+.. | ..+..+++|..-+.
T Consensus 283 ~D~N~~GY~N~~T~KS~~F~~D~~-v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~N 361 (609)
T KOG4227|consen 283 SDHNPNGYCNIKTIKSMTFIDDYT-VATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPN 361 (609)
T ss_pred ccCCCCcceeeeeeeeeeeeccee-eeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEeccccccc
Confidence 22122 12356677775544 99999999999998732 1 12355789999999
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1957 SISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1957 sLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
.+.|+|...+|++.|-...+++|.--
T Consensus 362 QVRF~~H~~~l~SSGVE~~~KlWS~~ 387 (609)
T KOG4227|consen 362 QVRFSQHNNLLVSSGVENSFKLWSDH 387 (609)
T ss_pred ceeecCCcceEeccchhhheeccccc
Confidence 99999999999999999999999754
No 173
>KOG0642|consensus
Probab=99.65 E-value=6.5e-16 Score=187.56 Aligned_cols=267 Identities=17% Similarity=0.231 Sum_probs=206.5
Q ss_pred cccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCC--------CceEEEeeCCCCceEEEEEecCCCEEEEe
Q psy8748 1681 KLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWT--------GNKTQVIPLRSAWVMSVAFAQSGNFVACG 1752 (2004)
Q Consensus 1681 k~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~T--------gk~l~ti~~Ht~~ItsLafSPdg~~LaSG 1752 (2004)
+|.+..++..|.+.|+.++|.|....|++++.||+|++|++.. -+.+.++.+|.++|.|++..+++..+++|
T Consensus 283 ~w~ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysg 362 (577)
T KOG0642|consen 283 KWNIKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSG 362 (577)
T ss_pred ecceeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEee
Confidence 4566678999999999999999999999999999999999832 25677899999999999999999999999
Q ss_pred ecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEE
Q psy8748 1753 GMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISL 1832 (2004)
Q Consensus 1753 S~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLaf 1832 (2004)
+.||+|+.|++.... .. +|......+...+.+|.+.|+.+++
T Consensus 363 g~Dg~I~~w~~p~n~-----dp---------------------------------~ds~dp~vl~~~l~Ghtdavw~l~~ 404 (577)
T KOG0642|consen 363 GIDGTIRCWNLPPNQ-----DP---------------------------------DDSYDPSVLSGTLLGHTDAVWLLAL 404 (577)
T ss_pred ccCceeeeeccCCCC-----Cc---------------------------------ccccCcchhccceeccccceeeeee
Confidence 999999999986211 00 1111112223445699999999999
Q ss_pred CCCCCEEEEEECCCeEEEEECCCCeEEEEEecC--CCCeEEEEEeCCC-CEEEEEECCCeEEEEEccCCceeEEEcCCC-
Q psy8748 1833 SPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGH--EADVNSVCFHPSG-LAFATGSEDKTARLFDIRADQQIATYLPPN- 1908 (2004)
Q Consensus 1833 SPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h--~s~ItsIafSPdg-~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~- 1908 (2004)
+.....|++++.||+++.|+.....+ .++... .+...++.+-... .+.++...-|.-.++++.....+..+....
T Consensus 405 s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~ 483 (577)
T KOG0642|consen 405 SSTKDRLLSCSSDGTVRLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSAS 483 (577)
T ss_pred cccccceeeecCCceEEeeccCCcCc-cccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCC
Confidence 99988999999999999999876665 333322 2233455554433 233333334444455555555544442221
Q ss_pred ----CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1909 ----KNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1909 ----~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
....+..+.++|.+.+.+++..|+.|+++|..++..+....+|...++++++.|+|.+|++++.||.|++|++...
T Consensus 484 ~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k 563 (577)
T KOG0642|consen 484 PGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVK 563 (577)
T ss_pred CcccccCccceEEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccch
Confidence 1245778899999999999999999999999999999999999999999999999999999999999999999775
Q ss_pred eE
Q psy8748 1985 IV 1986 (2004)
Q Consensus 1985 ~l 1986 (2004)
.+
T Consensus 564 ~~ 565 (577)
T KOG0642|consen 564 TC 565 (577)
T ss_pred he
Confidence 43
No 174
>KOG1587|consensus
Probab=99.65 E-value=2.9e-14 Score=181.10 Aligned_cols=269 Identities=18% Similarity=0.220 Sum_probs=200.5
Q ss_pred CeEEEEECCCCceEEEeeCCCCceEEEEEec-CCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC
Q psy8748 1714 GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQ-SGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID 1792 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSP-dg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd 1792 (2004)
+.+.||+++........-.....|++++|+| +.+.++.|+.+|.|.+||+..+..............|...+..+.|..
T Consensus 222 ~~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~ 301 (555)
T KOG1587|consen 222 GVLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQ 301 (555)
T ss_pred ceEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEec
Confidence 5799999988744444444567899999999 567888899999999999988765433444455667888999999873
Q ss_pred ---CCcEEEeecCCeEEEEECCCCceeEEe-----e------ccccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCe
Q psy8748 1793 ---DTTLLTGSGDMKIVTWNLETGQRIHEV-----A------QAHIGDVVSISLSP-DGQYFVTGSVDKSCKLWDFREKK 1857 (2004)
Q Consensus 1793 ---d~~LlSgS~DGtI~IWDl~tg~~i~~i-----l------~~h~~~ItsLafSP-dg~~LaSGS~DGsIrIWDlrs~k 1857 (2004)
+..+++++.||.|+.|+++.-...... . ......+++++|.+ +.+.|++|+.+|.|.--+....+
T Consensus 302 ~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~ 381 (555)
T KOG1587|consen 302 NEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYT 381 (555)
T ss_pred cCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCc
Confidence 245999999999999988653321111 0 12234688999988 56689999999998874433221
Q ss_pred --------EEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEcc-CCceeEEEcCCCCCCCeEEEEEcCCC-CEEEE
Q psy8748 1858 --------CVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIR-ADQQIATYLPPNKNSGFTSCAVSSSG-RYIFC 1927 (2004)
Q Consensus 1858 --------~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLr-tgk~i~t~~~~~~~s~ItsLafSPdG-~~LaS 1927 (2004)
.+..+..|.++|+++.++|-+..++..+.|.+++||... ...++..+ ..+...+++++|||.. ..+++
T Consensus 382 ~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~--~~~~~~v~~vaWSptrpavF~~ 459 (555)
T KOG1587|consen 382 PAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSL--DSSPDYVTDVAWSPTRPAVFAT 459 (555)
T ss_pred ccccccccccccccccCcceEeeecCCCccceeeeeccceeEeccccCCCCcchhh--hhccceeeeeEEcCcCceEEEE
Confidence 233556788999999999977665555559999999977 44444444 3334559999999955 57778
Q ss_pred EeCCCeEEEEECCC--CeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1928 GSDDNNVHVWDLLK--TTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1928 GSsDGsIrIWDL~t--ge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
+..||.|.+||+.. ..++.+...+....+.+.|++.|+.|+.|+..|.+.+|++...
T Consensus 460 ~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~~ 518 (555)
T KOG1587|consen 460 VDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSES 518 (555)
T ss_pred EcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCch
Confidence 88899999999954 4455555556677788899999999999999999999999754
No 175
>KOG1963|consensus
Probab=99.63 E-value=3.9e-14 Score=179.66 Aligned_cols=299 Identities=15% Similarity=0.225 Sum_probs=204.4
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcC
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLN 1764 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~ 1764 (2004)
.+.++-|.+.|++++|+++|.+|++||..|.+.+|.+.+++ .+-++.-.++|..+.++||++..+....|..|.+....
T Consensus 244 ~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~ 322 (792)
T KOG1963|consen 244 CTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKAS 322 (792)
T ss_pred ceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEecc
Confidence 34567799999999999999999999999999999999998 55567788999999999999999999999999999875
Q ss_pred CCCCCCcceEEEE-----EecCccceeeeEEeC-CCcEEEeecCCeEEEEECCCCceeEEee----c------cccCCeE
Q psy8748 1765 NRDSTGAAKVIRE-----LLGYEGFLSSCRFID-DTTLLTGSGDMKIVTWNLETGQRIHEVA----Q------AHIGDVV 1828 (2004)
Q Consensus 1765 t~~~~~~~k~i~s-----l~gh~~~Vssvafsd-d~~LlSgS~DGtI~IWDl~tg~~i~~il----~------~h~~~It 1828 (2004)
+.........+.. .....+-.+.+.+.+ .+.++-.+..|.|.+||+-+...+.++. . .+...++
T Consensus 323 dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~it 402 (792)
T KOG1963|consen 323 DLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGIT 402 (792)
T ss_pred chhhhhhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeee
Confidence 5332111111111 111234455555655 4568888999999999998877664441 1 1233467
Q ss_pred EEEECCCCCEEEEEE--------CCC--eEEEEECCCCeEE-----EEEecCCCCeEEEEEeC-C-CCEEEEEECCCeEE
Q psy8748 1829 SISLSPDGQYFVTGS--------VDK--SCKLWDFREKKCV-----QTFFGHEADVNSVCFHP-S-GLAFATGSEDKTAR 1891 (2004)
Q Consensus 1829 sLafSPdg~~LaSGS--------~DG--sIrIWDlrs~k~I-----~tl~~h~s~ItsIafSP-d-g~~LaSgS~DGtIr 1891 (2004)
+++.+..|.+++++- .|| .+++|-......- .....|+..+...++.+ . ...+++++.||.++
T Consensus 403 av~~~~~gs~maT~E~~~d~~~~~~~e~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~K 482 (792)
T KOG1963|consen 403 AVARSRFGSWMATLEARIDKFNFFDGEVSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFK 482 (792)
T ss_pred eehhhccceEEEEeeeeehhhhccCceEEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEE
Confidence 777777898888864 233 5788976544321 22246777666666654 2 33799999999999
Q ss_pred EEEccCCcee--------EEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeeeEEEccCCCCeEEEEEcC
Q psy8748 1892 LFDIRADQQI--------ATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLK-TTHNGVLSGHENRVTSISLSP 1962 (2004)
Q Consensus 1892 IWDLrtgk~i--------~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~t-ge~l~tL~gHs~~VtsLaFSP 1962 (2004)
+|-+...+.+ ......-+..+++.++|+.||..+++| .+++|.+||..+ .+..........++..+.|..
T Consensus 483 iW~~~~~~n~~k~~s~W~c~~i~sy~k~~i~a~~fs~dGslla~s-~~~~Itiwd~~~~~~l~~~~~~~~~~~~~~~~~~ 561 (792)
T KOG1963|consen 483 IWVFTDDSNIYKKSSNWTCKAIGSYHKTPITALCFSQDGSLLAVS-FDDTITIWDYDTKNELLCTEGSRNWPIAELLFTA 561 (792)
T ss_pred EEEEecccccCcCccceEEeeeeccccCcccchhhcCCCcEEEEe-cCCEEEEecCCChhhhhccccccccchHhHhhhc
Confidence 9998432221 122223467789999999999776665 688999999988 444444333334444444432
Q ss_pred CC--CEEEEEECCCeEEEEECCCCe
Q psy8748 1963 NG--MALVTSSWDQFVKVWQESNTI 1985 (2004)
Q Consensus 1963 Dg--~~LaSgS~DGtIrIWdlstg~ 1985 (2004)
.. ...+.....+.+.+|++-+..
T Consensus 562 ~~~~~~~~~~~~~~~l~~WNll~~~ 586 (792)
T KOG1963|consen 562 QTQNDGALVHATQQRLSVWNLLSMS 586 (792)
T ss_pred ccccccceeeccCceEehHhhhhhh
Confidence 11 122333446788999987764
No 176
>KOG2919|consensus
Probab=99.63 E-value=4.7e-14 Score=162.01 Aligned_cols=235 Identities=18% Similarity=0.306 Sum_probs=177.9
Q ss_pred cceeEEEEe-------CCCCEEEEEeCCCeEEEEECCCCceEEEeeC--CC---CceEEEEEecCCCEEEEeecCCeEEE
Q psy8748 1693 NKVNSVHYS-------GDSRHCVSGSLDGKLIIWDTWTGNKTQVIPL--RS---AWVMSVAFAQSGNFVACGGMDNMCTV 1760 (2004)
Q Consensus 1693 ~~VtsLaFS-------PDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~--Ht---~~ItsLafSPdg~~LaSGS~DGtIrV 1760 (2004)
+.|...+|- |+..++|+.+.|.-|.+||.-+|+....+.. |. ....+++|+|||..|++|. ...|++
T Consensus 105 ~tvydy~wYs~M~s~qP~t~l~a~ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirv 183 (406)
T KOG2919|consen 105 ETVYDYCWYSRMKSDQPSTNLFAVSSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRV 183 (406)
T ss_pred CEEEEEEeeeccccCCCccceeeeccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEE
Confidence 345555553 6778999999999999999999998887754 32 2457899999999999875 567999
Q ss_pred EEcCCC-CCCCcceEE-EEEecCccceeeeEEeCC--CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCC
Q psy8748 1761 YDLNNR-DSTGAAKVI-RELLGYEGFLSSCRFIDD--TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDG 1836 (2004)
Q Consensus 1761 WDl~t~-~~~~~~k~i-~sl~gh~~~Vssvafsdd--~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg 1836 (2004)
+|+... ......... +...+..+.+.+++|++. ..+++|+....+-+|.-..+..+ ....+|.+.|+.++|+++|
T Consensus 184 Fdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl-~llggh~gGvThL~~~edG 262 (406)
T KOG2919|consen 184 FDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPL-QLLGGHGGGVTHLQWCEDG 262 (406)
T ss_pred eeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCce-eeecccCCCeeeEEeccCc
Confidence 999433 221111111 224456788899999854 45889999999999988777776 4556999999999999999
Q ss_pred CEEEEEEC-CCeEEEEECCCC-eEEEEEecCCC-CeEEE--EEeCCCCEEEEEECCCeEEEEEccC-CceeEEEcCCCCC
Q psy8748 1837 QYFVTGSV-DKSCKLWDFREK-KCVQTFFGHEA-DVNSV--CFHPSGLAFATGSEDKTARLFDIRA-DQQIATYLPPNKN 1910 (2004)
Q Consensus 1837 ~~LaSGS~-DGsIrIWDlrs~-k~I~tl~~h~s-~ItsI--afSPdg~~LaSgS~DGtIrIWDLrt-gk~i~t~~~~~~~ 1910 (2004)
+.|++|.. |-.|-.||++.. .++..+..|.+ .-..| ...|++++|++|+.||.|++||+++ +..+..+ ..+.
T Consensus 263 n~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~--~~~s 340 (406)
T KOG2919|consen 263 NKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVT--GNYS 340 (406)
T ss_pred CeecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCccccc--cccc
Confidence 99999975 678999999854 45556666654 23334 4468999999999999999999988 5545444 4555
Q ss_pred CCeEEEEEcCCCCEEEEEeCC
Q psy8748 1911 SGFTSCAVSSSGRYIFCGSDD 1931 (2004)
Q Consensus 1911 s~ItsLafSPdG~~LaSGSsD 1931 (2004)
..+..++++|--.++++++..
T Consensus 341 d~vNgvslnP~mpilatssGq 361 (406)
T KOG2919|consen 341 DTVNGVSLNPIMPILATSSGQ 361 (406)
T ss_pred ccccceecCcccceeeeccCc
Confidence 678899999998888887654
No 177
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.63 E-value=2.8e-13 Score=164.37 Aligned_cols=283 Identities=12% Similarity=0.182 Sum_probs=183.3
Q ss_pred EEEeCCCeEEEEECCC-Cc--eEEEeeCCCCceEEEEEecCCCEEEEee-cCCeEEEEEcCCCCCCCcceEEEEEecCcc
Q psy8748 1708 VSGSLDGKLIIWDTWT-GN--KTQVIPLRSAWVMSVAFAQSGNFVACGG-MDNMCTVYDLNNRDSTGAAKVIRELLGYEG 1783 (2004)
Q Consensus 1708 ASGS~DGtIrVWDl~T-gk--~l~ti~~Ht~~ItsLafSPdg~~LaSGS-~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~ 1783 (2004)
++...++.|.+||+.+ ++ .+..+. +.+....++++|++++|++++ .++.|.+|+++... ......... ..+
T Consensus 6 ~~~~~~~~I~~~~~~~~g~l~~~~~~~-~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g---~l~~~~~~~-~~~ 80 (330)
T PRK11028 6 IASPESQQIHVWNLNHEGALTLLQVVD-VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDG---ALTFAAESP-LPG 80 (330)
T ss_pred EEcCCCCCEEEEEECCCCceeeeeEEe-cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCC---ceEEeeeec-CCC
Confidence 3446789999999964 43 444444 345577899999999887664 57889999996321 122222222 223
Q ss_pred ceeeeEEeCCCc-EEEee-cCCeEEEEECCCCceeEE-e-eccccCCeEEEEECCCCCEEEEEE-CCCeEEEEECCCCeE
Q psy8748 1784 FLSSCRFIDDTT-LLTGS-GDMKIVTWNLETGQRIHE-V-AQAHIGDVVSISLSPDGQYFVTGS-VDKSCKLWDFREKKC 1858 (2004)
Q Consensus 1784 ~Vssvafsdd~~-LlSgS-~DGtI~IWDl~tg~~i~~-i-l~~h~~~ItsLafSPdg~~LaSGS-~DGsIrIWDlrs~k~ 1858 (2004)
....+.+.+++. +++++ .++.|.+|++++...... . ...+.....+++++|+++++++++ .++.|.+||+.+...
T Consensus 81 ~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~ 160 (330)
T PRK11028 81 SPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIEGLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGH 160 (330)
T ss_pred CceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeeccCCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCc
Confidence 456777775554 55544 489999999974321111 1 112234567789999999886655 568999999976332
Q ss_pred EEE-----Ee-cCCCCeEEEEEeCCCCEEEEEEC-CCeEEEEEccC--Cc--eeEEEcCC-C---CCCCeEEEEEcCCCC
Q psy8748 1859 VQT-----FF-GHEADVNSVCFHPSGLAFATGSE-DKTARLFDIRA--DQ--QIATYLPP-N---KNSGFTSCAVSSSGR 1923 (2004)
Q Consensus 1859 I~t-----l~-~h~s~ItsIafSPdg~~LaSgS~-DGtIrIWDLrt--gk--~i~t~~~~-~---~~s~ItsLafSPdG~ 1923 (2004)
+.. .. ........+.|+|+|++++++.. ++.|.+||+.. ++ ....+... . .......+.++|+|+
T Consensus 161 l~~~~~~~~~~~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~ 240 (330)
T PRK11028 161 LVAQEPAEVTTVEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGR 240 (330)
T ss_pred ccccCCCceecCCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCC
Confidence 211 11 12345678999999999988876 89999999973 22 22222111 1 112234688999999
Q ss_pred EEEEEeC-CCeEEEEECCCCeeeEEEccC---CCCeEEEEEcCCCCEEEEEEC-CCeEEEEECCC-CeEEEEEEeecC
Q psy8748 1924 YIFCGSD-DNNVHVWDLLKTTHNGVLSGH---ENRVTSISLSPNGMALVTSSW-DQFVKVWQESN-TIVWKVLKVYNL 1995 (2004)
Q Consensus 1924 ~LaSGSs-DGsIrIWDL~tge~l~tL~gH---s~~VtsLaFSPDg~~LaSgS~-DGtIrIWdlst-g~l~k~Ik~~~~ 1995 (2004)
+++++.. ++.|.+|++........+.++ ......+.|+|+|++|++++. +++|.+|+++. ...+..++.+..
T Consensus 241 ~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~~g~l~~~~~~~~ 318 (330)
T PRK11028 241 HLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEIDGETGLLTELGRYAV 318 (330)
T ss_pred EEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEcCCCCcEEEcccccc
Confidence 9999865 689999998553322222222 124567899999999998876 89999998853 223455555543
No 178
>KOG1538|consensus
Probab=99.62 E-value=2.3e-14 Score=174.19 Aligned_cols=239 Identities=16% Similarity=0.269 Sum_probs=183.0
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcC
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLN 1764 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~ 1764 (2004)
..+|+||.+.|+|++|+.||+.+|+|+.|+.|.+|+-+-...+ . ..|++.|.|+.|+|-...+++++-.. .-+|..+
T Consensus 46 lqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~L-k-YSH~D~IQCMsFNP~~h~LasCsLsd-FglWS~~ 122 (1081)
T KOG1538|consen 46 LQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGIL-K-YSHNDAIQCMSFNPITHQLASCSLSD-FGLWSPE 122 (1081)
T ss_pred ccccccccceEEEEEEccCCceeccCCCceeEEEeccccccee-e-eccCCeeeEeecCchHHHhhhcchhh-ccccChh
Confidence 3457889999999999999999999999999999985322222 1 35999999999999999999987654 6688765
Q ss_pred CCCCCCcceEEEEEecCccceeeeEEeC-CCcEEEeecCCeEEEEECCCCceeEEe--eccccCCeEEEEECCCC-----
Q psy8748 1765 NRDSTGAAKVIRELLGYEGFLSSCRFID-DTTLLTGSGDMKIVTWNLETGQRIHEV--AQAHIGDVVSISLSPDG----- 1836 (2004)
Q Consensus 1765 t~~~~~~~k~i~sl~gh~~~Vssvafsd-d~~LlSgS~DGtI~IWDl~tg~~i~~i--l~~h~~~ItsLafSPdg----- 1836 (2004)
.... ........+.+++|.+ +.+++.|-.+|+|.+-+-...... .+ ..+...+|.+++|+|..
T Consensus 123 qK~V--------~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~-~I~Rpgg~Nspiwsi~~~p~sg~G~~ 193 (1081)
T KOG1538|consen 123 QKSV--------SKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKV-KIERPGGSNSPIWSICWNPSSGEGRN 193 (1081)
T ss_pred hhhH--------HhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcce-EEeCCCCCCCCceEEEecCCCCCCcc
Confidence 4211 0112244677788874 556888999999999865433332 33 34567889999999953
Q ss_pred CEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEE
Q psy8748 1837 QYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSC 1916 (2004)
Q Consensus 1837 ~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsL 1916 (2004)
..+++.....++.+|.+. |+.+..-+..+-...|+.+.++|.++..|+.|+.+++|-. .|-.+.+.. .....|+.+
T Consensus 194 di~aV~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR-~GvrLGTvg--~~D~WIWtV 269 (1081)
T KOG1538|consen 194 DILAVADWGQTLSFYQLS-GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTR-DGVRLGTVG--EQDSWIWTV 269 (1081)
T ss_pred ceEEEEeccceeEEEEec-ceeecccccCCCCchhheeccCCcEEEEccCCCceEEEee-cCeEEeecc--ccceeEEEE
Confidence 367777888888888764 4445444445566789999999999999999999999974 466666653 345789999
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1917 AVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1917 afSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
+..|++.+++.|+.||+|-.|++
T Consensus 270 ~~~PNsQ~v~~GCqDGTiACyNl 292 (1081)
T KOG1538|consen 270 QAKPNSQYVVVGCQDGTIACYNL 292 (1081)
T ss_pred EEccCCceEEEEEccCeeehhhh
Confidence 99999999999999999999987
No 179
>KOG0644|consensus
Probab=99.60 E-value=2e-15 Score=187.61 Aligned_cols=290 Identities=18% Similarity=0.207 Sum_probs=228.2
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcC
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLN 1764 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~ 1764 (2004)
++.|.||..+|.|..|...|.++++|++|..++||...++.+.....+|.+.|+.++.+.+..++++++.|..|++|.+.
T Consensus 183 ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~ 262 (1113)
T KOG0644|consen 183 IKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLP 262 (1113)
T ss_pred HHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecC
Confidence 56688999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEE---eeccccCCeEEEEECCCCCEEEE
Q psy8748 1765 NRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHE---VAQAHIGDVVSISLSPDGQYFVT 1841 (2004)
Q Consensus 1765 t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~---il~~h~~~ItsLafSPdg~~LaS 1841 (2004)
.+ ..+..+.+|.+.|++++|++-. +.+.||++++||.+-.-.+.. ........+.++.|...+..+++
T Consensus 263 ~~------~pvsvLrghtgavtaiafsP~~---sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~~f~T 333 (1113)
T KOG0644|consen 263 DG------APVSVLRGHTGAVTAIAFSPRA---SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGDRFLT 333 (1113)
T ss_pred CC------chHHHHhccccceeeeccCccc---cCCCCCceEeccccccccccCCCCCCcccccceeeeecccccccccc
Confidence 64 5566788999999999998755 788999999999872111100 01122345677778778889999
Q ss_pred EECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCC-CCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcC
Q psy8748 1842 GSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPS-GLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSS 1920 (2004)
Q Consensus 1842 GS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPd-g~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSP 1920 (2004)
|+.|+.-..|...... .+...+.-+.++.+ ..+.+++-.+-.+.+|++.+|....... ++...+..+.++|
T Consensus 334 gs~d~ea~n~e~~~l~------~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~--ghsd~~yvLd~Hp 405 (1113)
T KOG0644|consen 334 GSRDGEARNHEFEQLA------WRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLM--GHSDEVYVLDVHP 405 (1113)
T ss_pred ccCCcccccchhhHhh------hhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhc--ccccceeeeeecC
Confidence 9999998888764321 11111111112212 2456667778889999999998776663 4556788899999
Q ss_pred CC-CEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEE
Q psy8748 1921 SG-RYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLK 1991 (2004)
Q Consensus 1921 dG-~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik 1991 (2004)
-+ +...+++.||...|||+..|.+++......+.+.+-+|++||..++....-|.++|.....++..+..+
T Consensus 406 fn~ri~msag~dgst~iwdi~eg~pik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~s~k~ak 477 (1113)
T KOG0644|consen 406 FNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGTGQSKSQKKAK 477 (1113)
T ss_pred CCcHhhhhccCCCceEeeecccCCcceeeecccceeeccccCCCCceEecCCCCCceEEeccCCCccccccc
Confidence 55 455578899999999999998887765445677888999999999999888999999888776554443
No 180
>KOG1034|consensus
Probab=99.60 E-value=7.2e-14 Score=161.09 Aligned_cols=245 Identities=16% Similarity=0.249 Sum_probs=188.3
Q ss_pred cccceeEEEEeCC----CCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCC-CEEEEeecCCeEEEEEcCC
Q psy8748 1691 HINKVNSVHYSGD----SRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSG-NFVACGGMDNMCTVYDLNN 1765 (2004)
Q Consensus 1691 Ht~~VtsLaFSPD----G~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg-~~LaSGS~DGtIrVWDl~t 1765 (2004)
|...-..++|+-| ..++|.||.-|.|+|.|+.+++....+.+|...|..+.++|+. +++++++.|..|++|++++
T Consensus 88 ~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~ 167 (385)
T KOG1034|consen 88 HDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQT 167 (385)
T ss_pred CCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccC
Confidence 4455667777643 3489999999999999999999999999999999999999964 7999999999999999987
Q ss_pred CCCCCcceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEE--------------------------
Q psy8748 1766 RDSTGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHE-------------------------- 1818 (2004)
Q Consensus 1766 ~~~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~-------------------------- 1818 (2004)
.. ......-..+|.+.|.++.|+ ++.++++++.|..+++|++...+....
T Consensus 168 ~~---Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~f 244 (385)
T KOG1034|consen 168 DV---CVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELSITYSPNKTTRPFPTPKTHFPDF 244 (385)
T ss_pred Ce---EEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhhcccCCCCccCcCCccccccccc
Confidence 53 344555677899999999999 556799999999999999984321100
Q ss_pred -eeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCC-C-------------eEEEEEecCCCCeEEEE--EeCCCCEE
Q psy8748 1819 -VAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFRE-K-------------KCVQTFFGHEADVNSVC--FHPSGLAF 1881 (2004)
Q Consensus 1819 -il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs-~-------------k~I~tl~~h~s~ItsIa--fSPdg~~L 1881 (2004)
...-|...|-|+.|- |+++++-+.++.|..|.... . ..+..+.-....|+-+. |.|-++.+
T Consensus 245 st~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~~Ti~~~~~~~~c~iWfirf~~d~~~~~l 322 (385)
T KOG1034|consen 245 STTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPESATTILGEFDYPMCDIWFIRFAFDPWQKML 322 (385)
T ss_pred cccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCccceeeeeEeccCccceEEEEEeecHHHHHH
Confidence 122355556666665 67899989999999998721 1 12233334445566554 45667899
Q ss_pred EEEECCCeEEEEEccCCcee--EEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy8748 1882 ATGSEDKTARLFDIRADQQI--ATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLL 1940 (2004)
Q Consensus 1882 aSgS~DGtIrIWDLrtgk~i--~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~ 1940 (2004)
+.|...|+|.+||++..... .++........|...+|+.||.+|+..++||+|.-||..
T Consensus 323 a~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 323 ALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDDGTVWRWDRV 383 (385)
T ss_pred hhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCCCcEEEEEee
Confidence 99999999999999876652 233333445678999999999999999999999999953
No 181
>KOG2110|consensus
Probab=99.59 E-value=1.8e-12 Score=152.07 Aligned_cols=291 Identities=18% Similarity=0.243 Sum_probs=209.7
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecC--CeEEEEEcCCCCCC
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMD--NMCTVYDLNNRDST 1769 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~D--GtIrVWDl~t~~~~ 1769 (2004)
...++.+.|+.+...|..|+.|| .++|+................|.-+-|+ ..+++..+.+ ..++++++..+.
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~k~~~~~~~~~~IvEmLFS--SSLvaiV~~~qpr~Lkv~~~Kk~~-- 79 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFEKCFSKDTEGVSIVEMLFS--SSLVAIVSIKQPRKLKVVHFKKKT-- 79 (391)
T ss_pred CcceeeeeeccceeEEEccCCCc-eeEEecCchHHhhcccCCCeEEEEeecc--cceeEEEecCCCceEEEEEcccCc--
Confidence 45677888999999999999988 6788876655543334444556666776 5555555544 458888876431
Q ss_pred CcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeecc--ccCCeEEEEECCCCCEEEEEE--CC
Q psy8748 1770 GAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQA--HIGDVVSISLSPDGQYFVTGS--VD 1845 (2004)
Q Consensus 1770 ~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~--h~~~ItsLafSPdg~~LaSGS--~D 1845 (2004)
.+.. ......|.++.+..+ +++++-.+ .|+|||+++.+.++.+... +...+.+++++..+.+++.-+ ..
T Consensus 80 ----~ICe-~~fpt~IL~VrmNr~-RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~ 152 (391)
T KOG2110|consen 80 ----TICE-IFFPTSILAVRMNRK-RLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTS 152 (391)
T ss_pred ----eEEE-EecCCceEEEEEccc-eEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCC
Confidence 1111 123445566665544 44444443 3999999999998877544 555677777777777887643 46
Q ss_pred CeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCe-EEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCE
Q psy8748 1846 KSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKT-ARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRY 1924 (2004)
Q Consensus 1846 GsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGt-IrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~ 1924 (2004)
|.|.+||..+-+.+..+..|++.+.+++|+++|.++++++..|+ ||||.+.+|+.+..|........|.+++|+|++.+
T Consensus 153 GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~ 232 (391)
T KOG2110|consen 153 GDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQF 232 (391)
T ss_pred ceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCe
Confidence 89999999999999999999999999999999999999999998 89999999999999976666677899999999999
Q ss_pred EEEEeCCCeEEEEECCCCeee-------------------------------------EEEccCCC---CeEEEEEcCCC
Q psy8748 1925 IFCGSDDNNVHVWDLLKTTHN-------------------------------------GVLSGHEN---RVTSISLSPNG 1964 (2004)
Q Consensus 1925 LaSGSsDGsIrIWDL~tge~l-------------------------------------~tL~gHs~---~VtsLaFSPDg 1964 (2004)
|++.+..++|++|.+...... ...+.... .+..+.-.+..
T Consensus 233 L~~sS~TeTVHiFKL~~~~~~~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~FAt~~l~~s~~~~~~~l~~~~~~ 312 (391)
T KOG2110|consen 233 LAASSNTETVHIFKLEKVSNNPPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRKFATAKLPESGRKNICSLSSIQKI 312 (391)
T ss_pred EEEecCCCeEEEEEecccccCCCCCCCCCCcccchhhhhhhhhcchhhhhhhhhccceeEEEccCCCccceEEeeccCCC
Confidence 999999999999987431100 00000011 12222223467
Q ss_pred CEEEEEECCCeEEEEECC--CCeEEEEEEeec
Q psy8748 1965 MALVTSSWDQFVKVWQES--NTIVWKVLKVYN 1994 (2004)
Q Consensus 1965 ~~LaSgS~DGtIrIWdls--tg~l~k~Ik~~~ 1994 (2004)
.++..++.||.++.|.+. +|.....++.+.
T Consensus 313 ~~v~vas~dG~~y~y~l~~~~gGec~lik~h~ 344 (391)
T KOG2110|consen 313 PRVLVASYDGHLYSYRLPPKEGGECALIKRHF 344 (391)
T ss_pred CEEEEEEcCCeEEEEEcCCCCCceeEEEEeec
Confidence 889999999999999885 355556666544
No 182
>KOG1334|consensus
Probab=99.58 E-value=9.2e-15 Score=174.79 Aligned_cols=298 Identities=18% Similarity=0.303 Sum_probs=230.4
Q ss_pred ccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe-eCCCCceEEEEEecC--CCEEEEeecCCeEEE
Q psy8748 1684 PKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVI-PLRSAWVMSVAFAQS--GNFVACGGMDNMCTV 1760 (2004)
Q Consensus 1684 pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti-~~Ht~~ItsLafSPd--g~~LaSGS~DGtIrV 1760 (2004)
....|.+|.+.|+.+.|+..|..+++|+.|..|.+||+..++....+ .+|...|....|.|. ...+++++.||.+++
T Consensus 134 l~~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~ 213 (559)
T KOG1334|consen 134 LQKKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRV 213 (559)
T ss_pred hhhcccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceee
Confidence 45678899999999999999999999999999999999999877666 578888888889884 568999999999999
Q ss_pred EEcCCCCCCCcceEEEEEecCccceeeeEEeCCC--cEEEeecCCeEEEEECCCCceeEEee--ccccC---CeEEEEEC
Q psy8748 1761 YDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT--TLLTGSGDMKIVTWNLETGQRIHEVA--QAHIG---DVVSISLS 1833 (2004)
Q Consensus 1761 WDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~--~LlSgS~DGtI~IWDl~tg~~i~~il--~~h~~---~ItsLafS 1833 (2004)
=.+.... .......+..|.+.+..++.-++. .|.+++.|+.+.-+|++.+.....+. ..+.. ...+++.+
T Consensus 214 s~i~~t~---~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~ 290 (559)
T KOG1334|consen 214 SEILETG---YVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVD 290 (559)
T ss_pred eeecccc---ceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecC
Confidence 8876432 233345566788888888877543 59999999999999998776443321 22222 56788999
Q ss_pred CCC-CEEEEEECCCeEEEEECCCCeE------EEEEec------CCCCeEEEEEeCCCCEEEEEECCCeEEEEEccC--C
Q psy8748 1834 PDG-QYFVTGSVDKSCKLWDFREKKC------VQTFFG------HEADVNSVCFHPSGLAFATGSEDKTARLFDIRA--D 1898 (2004)
Q Consensus 1834 Pdg-~~LaSGS~DGsIrIWDlrs~k~------I~tl~~------h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrt--g 1898 (2004)
|-. ..+++|+.|-.+++||.+.-.. +..+.. ....|+|++|+.++.-+.++..|-.|+++.-.- |
T Consensus 291 P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~IYLF~~~~~~G 370 (559)
T KOG1334|consen 291 PRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDIYLFNKSMGDG 370 (559)
T ss_pred CCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccceEEeccccccC
Confidence 854 4899999999999999874321 223322 234699999998887777788888899995322 2
Q ss_pred ----------ceeEE-EcCCCCCCCeEEEE-EcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCE
Q psy8748 1899 ----------QQIAT-YLPPNKNSGFTSCA-VSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMA 1966 (2004)
Q Consensus 1899 ----------k~i~t-~~~~~~~s~ItsLa-fSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~ 1966 (2004)
..... +..+.....|..+- |-|...|+++|++-|.|.||+-.+++.+..+.+...-|+|+.-+|.-..
T Consensus 371 ~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~Pv 450 (559)
T KOG1334|consen 371 SEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPV 450 (559)
T ss_pred CCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCch
Confidence 11111 33233333455554 5678899999999999999999999999999888889999999999999
Q ss_pred EEEEECCCeEEEEECCCC
Q psy8748 1967 LVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1967 LaSgS~DGtIrIWdlstg 1984 (2004)
||++|-|.-|+||...+.
T Consensus 451 LAsSGid~DVKIWTP~~~ 468 (559)
T KOG1334|consen 451 LASSGIDHDVKIWTPLTA 468 (559)
T ss_pred hhccCCccceeeecCCcc
Confidence 999999999999987443
No 183
>KOG1007|consensus
Probab=99.58 E-value=3.2e-14 Score=161.39 Aligned_cols=284 Identities=20% Similarity=0.212 Sum_probs=198.8
Q ss_pred cccccccccceeEEEEeC-CCCEEEEEeCC-------CeEEEEECCCC---------ceEEEee-CCCCceEEEEEecCC
Q psy8748 1685 KKSLKGHINKVNSVHYSG-DSRHCVSGSLD-------GKLIIWDTWTG---------NKTQVIP-LRSAWVMSVAFAQSG 1746 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSP-DG~~LASGS~D-------GtIrVWDl~Tg---------k~l~ti~-~Ht~~ItsLafSPdg 1746 (2004)
.+.|..|.+.|+.++-+| +.+.|+|+..+ ..+.||.+... +++..+. .+-+.|.|+.|.|++
T Consensus 56 skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~Ldteavg~i~cvew~Pns 135 (370)
T KOG1007|consen 56 SKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASLDTEAVGKINCVEWEPNS 135 (370)
T ss_pred hhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcCCHHHhCceeeEEEcCCC
Confidence 346778999999999999 44566666543 24789987543 2223333 345689999999999
Q ss_pred CEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC--CCcEEEeecCCeEEEEECCCCceeEEeecccc
Q psy8748 1747 NFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID--DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHI 1824 (2004)
Q Consensus 1747 ~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd--d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~ 1824 (2004)
..+++.. |..|.+|+++........-......++....++-.|++ +..-+....|+++..||.++.+....+...|.
T Consensus 136 ~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl~~~D~RT~~~~~sI~dAHg 214 (370)
T KOG1007|consen 136 DKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTLQFWDLRTMKKNNSIEDAHG 214 (370)
T ss_pred CeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCcEEEEEccchhhhcchhhhhc
Confidence 9998877 77899999987543211111112223455667777775 44567777899999999999998888889999
Q ss_pred CCeEEEEECCCCC-EEEEEECCCeEEEEECCCC-eEEEEEecCCCCeEEEEEeCC-CCEEEEEECCCeEEEEEccCCcee
Q psy8748 1825 GDVVSISLSPDGQ-YFVTGSVDKSCKLWDFREK-KCVQTFFGHEADVNSVCFHPS-GLAFATGSEDKTARLFDIRADQQI 1901 (2004)
Q Consensus 1825 ~~ItsLafSPdg~-~LaSGS~DGsIrIWDlrs~-k~I~tl~~h~s~ItsIafSPd-g~~LaSgS~DGtIrIWDLrtgk~i 1901 (2004)
..|..+.|+|+.+ +|++++.||.|+|||.+.. .++..+.+|...|+++.|+|. ...+++|+.|..|.+|....-...
T Consensus 215 q~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~svSSE 294 (370)
T KOG1007|consen 215 QRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCASSVSSE 294 (370)
T ss_pred ceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEeccccccc
Confidence 9999999999766 6788999999999999854 568899999999999999994 567889999999999986533222
Q ss_pred EEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCE-EEEEECCCeEEEEE
Q psy8748 1902 ATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMA-LVTSSWDQFVKVWQ 1980 (2004)
Q Consensus 1902 ~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~-LaSgS~DGtIrIWd 1980 (2004)
..+........ .+ +.|..=++=-+ ....+.++..|.+.|.+++|+.-..+ +|+-+.||.+.|=+
T Consensus 295 ~qi~~~~dese------~e--------~~dseer~kpL-~dg~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~ 359 (370)
T KOG1007|consen 295 QQIEFEDDESE------SE--------DEDSEERVKPL-QDGQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISS 359 (370)
T ss_pred ccccccccccc------Cc--------chhhHHhcccc-cccccccccccccceEEEeeccCCCeeEEEeccCceEEeec
Confidence 22211111000 00 00100000011 12234566689999999999875554 67789999998877
Q ss_pred CCCC
Q psy8748 1981 ESNT 1984 (2004)
Q Consensus 1981 lstg 1984 (2004)
+...
T Consensus 360 V~r~ 363 (370)
T KOG1007|consen 360 VPRF 363 (370)
T ss_pred CChh
Confidence 7653
No 184
>KOG0644|consensus
Probab=99.58 E-value=4.6e-15 Score=184.56 Aligned_cols=281 Identities=17% Similarity=0.255 Sum_probs=215.1
Q ss_pred CCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCcc
Q psy8748 1554 CKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSSI 1633 (2004)
Q Consensus 1554 Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgSi 1633 (2004)
|...|.|+.|...|.|+++ |++|..++||...+ .+
T Consensus 189 H~naVyca~fDrtg~~Iit-gsdd~lvKiwS~et-------------~~------------------------------- 223 (1113)
T KOG0644|consen 189 HRNAVYCAIFDRTGRYIIT-GSDDRLVKIWSMET-------------AR------------------------------- 223 (1113)
T ss_pred hhhheeeeeeccccceEee-cCccceeeeeeccc-------------hh-------------------------------
Confidence 8889999999999999999 99999999999777 11
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEeCC
Q psy8748 1634 NIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLD 1713 (2004)
Q Consensus 1634 di~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~D 1713 (2004)
+.....||.+.|+.++.+.+..++++++.|
T Consensus 224 --------------------------------------------------~lAs~rGhs~ditdlavs~~n~~iaaaS~D 253 (1113)
T KOG0644|consen 224 --------------------------------------------------CLASCRGHSGDITDLAVSSNNTMIAAASND 253 (1113)
T ss_pred --------------------------------------------------hhccCCCCccccchhccchhhhhhhhcccC
Confidence 233467899999999999999999999999
Q ss_pred CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe-C
Q psy8748 1714 GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI-D 1792 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs-d 1792 (2004)
..|++|.+.++..+..+.+|++.|++++|+|-. +.+.||++++||.+-......... ..+ ...+.+..+.+. .
T Consensus 254 ~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp-~~~-~~~~~~~s~~~~~~ 327 (1113)
T KOG0644|consen 254 KVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRP-LKF-TEKDLVDSILFENN 327 (1113)
T ss_pred ceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCC-CCc-ccccceeeeecccc
Confidence 999999999999999999999999999999965 778899999999872100000000 001 112333334443 4
Q ss_pred CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCC-CCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEE
Q psy8748 1793 DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPD-GQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNS 1871 (2004)
Q Consensus 1793 d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPd-g~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~Its 1871 (2004)
...+.+++.|+.-..|.+..-.. +...+.-+.++.+ ..+.+++-.+-.+++|++.++.......+|...+..
T Consensus 328 ~~~f~Tgs~d~ea~n~e~~~l~~-------~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yv 400 (1113)
T KOG0644|consen 328 GDRFLTGSRDGEARNHEFEQLAW-------RSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYV 400 (1113)
T ss_pred ccccccccCCcccccchhhHhhh-------hccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceee
Confidence 45688999999888887643211 1111111111111 245566667788999999999999999999999999
Q ss_pred EEEeCC-CCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCee
Q psy8748 1872 VCFHPS-GLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTH 1944 (2004)
Q Consensus 1872 IafSPd-g~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~ 1944 (2004)
+.++|- .....+++.||...|||+-.|..+..+... ...+...+|+++|..++....-|.++|.....++.
T Consensus 401 Ld~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~g--h~kl~d~kFSqdgts~~lsd~hgql~i~g~gqs~s 472 (1113)
T KOG0644|consen 401 LDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIG--HGKLVDGKFSQDGTSIALSDDHGQLYILGTGQSKS 472 (1113)
T ss_pred eeecCCCcHhhhhccCCCceEeeecccCCcceeeecc--cceeeccccCCCCceEecCCCCCceEEeccCCCcc
Confidence 999994 455678999999999999999888877633 46788899999999999999999999998755443
No 185
>KOG0303|consensus
Probab=99.58 E-value=1.6e-13 Score=161.07 Aligned_cols=233 Identities=19% Similarity=0.322 Sum_probs=182.6
Q ss_pred EeeCCCCceEEEEEec-CCCEEEEeecCCeEEEEEcCCCCCC-CcceEEEEEecCccceeeeEEeCC--CcEEEeecCCe
Q psy8748 1729 VIPLRSAWVMSVAFAQ-SGNFVACGGMDNMCTVYDLNNRDST-GAAKVIRELLGYEGFLSSCRFIDD--TTLLTGSGDMK 1804 (2004)
Q Consensus 1729 ti~~Ht~~ItsLafSP-dg~~LaSGS~DGtIrVWDl~t~~~~-~~~k~i~sl~gh~~~Vssvafsdd--~~LlSgS~DGt 1804 (2004)
.+.+|+++|..++|+| +.+.|++|+.|.+|.||.+..+... ........+.+|...|..+.|++. +.+++++.|..
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 3568999999999999 5678999999999999999765432 234567889999999999999964 67999999999
Q ss_pred EEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCC-CeEEEEEeCCCCEEEE
Q psy8748 1805 IVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEA-DVNSVCFHPSGLAFAT 1883 (2004)
Q Consensus 1805 I~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s-~ItsIafSPdg~~LaS 1883 (2004)
|.+||+.+|+.+..+ .|.+.|.++.|+.+|.++++++.|..|+|||.++++.+..-.+|.+ .-..+.|-.+|..+-+
T Consensus 156 v~iWnv~tgeali~l--~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tT 233 (472)
T KOG0303|consen 156 VSIWNVGTGEALITL--DHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTT 233 (472)
T ss_pred EEEEeccCCceeeec--CCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeee
Confidence 999999999988665 4999999999999999999999999999999999999988878865 4556778888885544
Q ss_pred EE---CCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEE-EEeCCCeEEEEECCCCeeeEE-Ec--cCCCCeE
Q psy8748 1884 GS---EDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIF-CGSDDNNVHVWDLLKTTHNGV-LS--GHENRVT 1956 (2004)
Q Consensus 1884 gS---~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~La-SGSsDGsIrIWDL~tge~l~t-L~--gHs~~Vt 1956 (2004)
|- .+..+-+||..+......+..-....+|.---|++|.++++ +|-.||.|+.|.+.+..+... +. ....+=.
T Consensus 234 Gfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~P~~hyln~f~S~epQR 313 (472)
T KOG0303|consen 234 GFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEPPFVHYLNTFSSKEPQR 313 (472)
T ss_pred ccccccccceeccCcccccCcceeEEeccCCceEEeeecCCCCEEEEEecCCcceEEEEecCCCceeEEecccccCCccc
Confidence 43 36789999987665544443345556787778899888776 555699999999977654322 21 1233444
Q ss_pred EEEEcCC
Q psy8748 1957 SISLSPN 1963 (2004)
Q Consensus 1957 sLaFSPD 1963 (2004)
++.|-|.
T Consensus 314 G~g~mPK 320 (472)
T KOG0303|consen 314 GMGFMPK 320 (472)
T ss_pred ccccccc
Confidence 5555554
No 186
>KOG0649|consensus
Probab=99.58 E-value=7.5e-13 Score=147.55 Aligned_cols=275 Identities=16% Similarity=0.213 Sum_probs=196.5
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECCC---------C-ceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEE
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWT---------G-NKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYD 1762 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~T---------g-k~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWD 1762 (2004)
..|.+-+|+|.+++|+.|..+|+|.+..+++ | ..+....+|+++|+.++|. ..+|++|+ ||.|+-|.
T Consensus 11 ~tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~--d~~Lls~g-dG~V~gw~ 87 (325)
T KOG0649|consen 11 NTVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFH--DDFLLSGG-DGLVYGWE 87 (325)
T ss_pred HHHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeee--hhheeecc-CceEEEee
Confidence 3566778999999999999999999998753 2 2344558899999999998 66777776 49999999
Q ss_pred cCCCCCCCcceE-------EEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC
Q psy8748 1763 LNNRDSTGAAKV-------IRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP 1834 (2004)
Q Consensus 1763 l~t~~~~~~~k~-------i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP 1834 (2004)
.+........+. .+.-...-..|.++... ..+.++.++.|+.++-||+++|+.. ..+++|.+.|.++.--.
T Consensus 88 W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~-r~~rGHtDYvH~vv~R~ 166 (325)
T KOG0649|consen 88 WNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQ-REYRGHTDYVHSVVGRN 166 (325)
T ss_pred ehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEE-EEEcCCcceeeeeeecc
Confidence 875432111010 00001112345555555 3455777779999999999999876 56689999999999866
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEEEecC----------CCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEE
Q psy8748 1835 DGQYFVTGSVDKSCKLWDFREKKCVQTFFGH----------EADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATY 1904 (2004)
Q Consensus 1835 dg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h----------~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~ 1904 (2004)
....+++|+.||++++||.++++.+..+... ...|.+++. +..++++|+ ...+.+|.++..++...+
T Consensus 167 ~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvCGg-Gp~lslwhLrsse~t~vf 243 (325)
T KOG0649|consen 167 ANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVCGG-GPKLSLWHLRSSESTCVF 243 (325)
T ss_pred cCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec--cCceEEecC-CCceeEEeccCCCceEEE
Confidence 6667999999999999999999998877432 223555554 455888775 678999999999998888
Q ss_pred cCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCC-CEEEEEECCCeEEEEE
Q psy8748 1905 LPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNG-MALVTSSWDQFVKVWQ 1980 (2004)
Q Consensus 1905 ~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg-~~LaSgS~DGtIrIWd 1980 (2004)
..+. .+..+.|. .+.+++++..+.|.-|.+ +|.............++..|+... +++-.+|....+.|+.
T Consensus 244 pipa---~v~~v~F~--~d~vl~~G~g~~v~~~~l-~Gvl~a~ip~~s~~c~s~s~~~~p~k~~s~ag~s~~~~i~~ 314 (325)
T KOG0649|consen 244 PIPA---RVHLVDFV--DDCVLIGGEGNHVQSYTL-NGVLQANIPVESTACYSASWQTSPIKFISIAGFSNKLHILK 314 (325)
T ss_pred eccc---ceeEeeee--cceEEEeccccceeeeee-ccEEEEeccCCccceeeecccCCceEEEEecccceeeeeee
Confidence 6554 46777775 456788888888999986 555555555555556666665443 3444556666676653
No 187
>KOG1587|consensus
Probab=99.57 E-value=8.2e-14 Score=177.02 Aligned_cols=249 Identities=17% Similarity=0.214 Sum_probs=184.5
Q ss_pred ccceeEEEEeC-CCCEEEEEeCCCeEEEEECCCCce--EEE----eeCCCCceEEEEEecCC--CEEEEeecCCeEEEEE
Q psy8748 1692 INKVNSVHYSG-DSRHCVSGSLDGKLIIWDTWTGNK--TQV----IPLRSAWVMSVAFAQSG--NFVACGGMDNMCTVYD 1762 (2004)
Q Consensus 1692 t~~VtsLaFSP-DG~~LASGS~DGtIrVWDl~Tgk~--l~t----i~~Ht~~ItsLafSPdg--~~LaSGS~DGtIrVWD 1762 (2004)
...|+|++|+| +..++|.|..+|.|.+||+..+.. ... ...|..++..+.|..+. .-+++++.||.|..|+
T Consensus 242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~ 321 (555)
T KOG1587|consen 242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWD 321 (555)
T ss_pred CCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeee
Confidence 46899999998 566788889999999999988765 222 24688999999997654 4599999999999998
Q ss_pred cCCCCCCCcceEEEEE------ecCccceeeeEEe--CCCcEEEeecCCeEEEEECCC---Cc----eeEEeeccccCCe
Q psy8748 1763 LNNRDSTGAAKVIREL------LGYEGFLSSCRFI--DDTTLLTGSGDMKIVTWNLET---GQ----RIHEVAQAHIGDV 1827 (2004)
Q Consensus 1763 l~t~~~~~~~k~i~sl------~gh~~~Vssvafs--dd~~LlSgS~DGtI~IWDl~t---g~----~i~~il~~h~~~I 1827 (2004)
++.............. ......++++.|. +...+++|+.+|.|..-+... +. ..+.....|.+.|
T Consensus 322 ~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v 401 (555)
T KOG1587|consen 322 TDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPV 401 (555)
T ss_pred ccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcce
Confidence 8754321111111111 1234456777777 445699999999998844332 22 1122345788999
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECC-CCeEEEEEecCCCCeEEEEEeCCC-CEEEEEECCCeEEEEEccCCceeEEEc
Q psy8748 1828 VSISLSPDGQYFVTGSVDKSCKLWDFR-EKKCVQTFFGHEADVNSVCFHPSG-LAFATGSEDKTARLFDIRADQQIATYL 1905 (2004)
Q Consensus 1828 tsLafSPdg~~LaSGS~DGsIrIWDlr-s~k~I~tl~~h~s~ItsIafSPdg-~~LaSgS~DGtIrIWDLrtgk~i~t~~ 1905 (2004)
.++.++|=+..++..+.|.+++||... ...++..+..+...+++++|||.. ..|+++..||.+.+||+..........
T Consensus 402 ~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~Pv~s 481 (555)
T KOG1587|consen 402 YAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEPVLS 481 (555)
T ss_pred EeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhccccCCccc
Confidence 999999966655554459999999988 667777777788889999999965 467788889999999997655433332
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy8748 1906 PPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLL 1940 (2004)
Q Consensus 1906 ~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~ 1940 (2004)
........+.+.|+++|+.+++|+..|++++|++.
T Consensus 482 ~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~ 516 (555)
T KOG1587|consen 482 QKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLS 516 (555)
T ss_pred ccccccccceeecCCCCcEEEEecCCCcEEEEEcC
Confidence 23334567788899999999999999999999985
No 188
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.55 E-value=6.8e-12 Score=152.30 Aligned_cols=244 Identities=16% Similarity=0.254 Sum_probs=159.7
Q ss_pred cceeEEEEeCCCCEEEEEe-CCCeEEEEECC-CCce--EEEeeCCCCceEEEEEecCCCEEEEeec-CCeEEEEEcCCCC
Q psy8748 1693 NKVNSVHYSGDSRHCVSGS-LDGKLIIWDTW-TGNK--TQVIPLRSAWVMSVAFAQSGNFVACGGM-DNMCTVYDLNNRD 1767 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS-~DGtIrVWDl~-Tgk~--l~ti~~Ht~~ItsLafSPdg~~LaSGS~-DGtIrVWDl~t~~ 1767 (2004)
+....++++|++++|++++ .++.|.+|++. +++. ..... ..+....++|+|+++++++++. ++.|.+|+++...
T Consensus 35 ~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g 113 (330)
T PRK11028 35 GQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDG 113 (330)
T ss_pred CCCccEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCC
Confidence 3455789999999887664 57889999986 3433 22222 2345678999999998888764 7899999997432
Q ss_pred CCCcceEEEEEecCccceeeeEEeCCC-cEE-EeecCCeEEEEECCCCceeEE-----eeccccCCeEEEEECCCCCEEE
Q psy8748 1768 STGAAKVIRELLGYEGFLSSCRFIDDT-TLL-TGSGDMKIVTWNLETGQRIHE-----VAQAHIGDVVSISLSPDGQYFV 1840 (2004)
Q Consensus 1768 ~~~~~k~i~sl~gh~~~Vssvafsdd~-~Ll-SgS~DGtI~IWDl~tg~~i~~-----il~~h~~~ItsLafSPdg~~La 1840 (2004)
.. ........+ ......+.+.+++ .++ +...++.|.+||+.+...+.. ...........++|+|+|++++
T Consensus 114 ~~--~~~~~~~~~-~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~~ly 190 (330)
T PRK11028 114 IP--VAPIQIIEG-LEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQYAY 190 (330)
T ss_pred CC--CCceeeccC-CCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCCEEE
Confidence 11 112222222 2234556666554 454 455679999999986432211 1111234467899999999998
Q ss_pred EEEC-CCeEEEEECCC--C--eEEEEEecC------CCCeEEEEEeCCCCEEEEEEC-CCeEEEEEccCCceeEEEc-CC
Q psy8748 1841 TGSV-DKSCKLWDFRE--K--KCVQTFFGH------EADVNSVCFHPSGLAFATGSE-DKTARLFDIRADQQIATYL-PP 1907 (2004)
Q Consensus 1841 SGS~-DGsIrIWDlrs--~--k~I~tl~~h------~s~ItsIafSPdg~~LaSgS~-DGtIrIWDLrtgk~i~t~~-~~ 1907 (2004)
++.. ++.|.+||++. + +.+..+... ......+.++|++++++++.. ++.|.+|++.......++. ..
T Consensus 191 v~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~ 270 (330)
T PRK11028 191 CVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSVLSFEGHQ 270 (330)
T ss_pred EEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCeEEEeEEE
Confidence 8876 89999999973 2 223333221 112346889999999998864 6889999986543211111 00
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeC-CCeEEEEECC
Q psy8748 1908 NKNSGFTSCAVSSSGRYIFCGSD-DNNVHVWDLL 1940 (2004)
Q Consensus 1908 ~~~s~ItsLafSPdG~~LaSGSs-DGsIrIWDL~ 1940 (2004)
........+.++|+|++|+++.. +++|.+|++.
T Consensus 271 ~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 271 PTETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred eccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 11123457899999999998775 8999999874
No 189
>KOG0642|consensus
Probab=99.55 E-value=3.5e-14 Score=172.81 Aligned_cols=261 Identities=16% Similarity=0.238 Sum_probs=196.0
Q ss_pred CCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCC
Q psy8748 1552 EPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTS 1631 (2004)
Q Consensus 1552 e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdg 1631 (2004)
..|-+.|+++.|+|..--|++ ++.||++++|.++. . ..
T Consensus 291 ~s~~d~ir~l~~~~sep~lit-~sed~~lk~WnLqk--------------------~--------------------~~- 328 (577)
T KOG0642|consen 291 RSHDDCIRALAFHPSEPVLIT-ASEDGTLKLWNLQK--------------------A--------------------KK- 328 (577)
T ss_pred ecchhhhhhhhcCCCCCeEEE-eccccchhhhhhcc--------------------c--------------------CC-
Confidence 448889999999999999999 99999999999844 0 00
Q ss_pred cchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEEEe
Q psy8748 1632 SINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGS 1711 (2004)
Q Consensus 1632 Sidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS 1711 (2004)
......+++.++++|.++|.|+++++++..+++||
T Consensus 329 ---------------------------------------------s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg 363 (577)
T KOG0642|consen 329 ---------------------------------------------SAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGG 363 (577)
T ss_pred ---------------------------------------------ccccceeeeEEEecccCceEEEEecCCceEEEeec
Confidence 00123457889999999999999999999999999
Q ss_pred CCCeEEEEECC------CC----ceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecC
Q psy8748 1712 LDGKLIIWDTW------TG----NKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGY 1781 (2004)
Q Consensus 1712 ~DGtIrVWDl~------Tg----k~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh 1781 (2004)
-||+|+.|++. +. .....+.+|++.|+.+++++....|++++.||+++.|+...... +.......
T Consensus 364 ~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-----~~f~~~~e 438 (577)
T KOG0642|consen 364 IDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-----CTFGEPKE 438 (577)
T ss_pred cCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-----cccCCccc
Confidence 99999999553 11 23456789999999999999999999999999999999865432 11111112
Q ss_pred ccceeeeEEeCCC--cEEEeecCCeEEEEECCCCceeEEeec------cccCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy8748 1782 EGFLSSCRFIDDT--TLLTGSGDMKIVTWNLETGQRIHEVAQ------AHIGDVVSISLSPDGQYFVTGSVDKSCKLWDF 1853 (2004)
Q Consensus 1782 ~~~Vssvafsdd~--~LlSgS~DGtI~IWDl~tg~~i~~il~------~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDl 1853 (2004)
.+....+.+.... ..++...-+.-.++++..+.....+-. .....+.-+.++|.+.+.+++..|+.|+++|.
T Consensus 439 ~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn 518 (577)
T KOG0642|consen 439 HGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRFFDN 518 (577)
T ss_pred cCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceecccc
Confidence 2333344443322 223333333334444444443322210 11245677889999999999999999999999
Q ss_pred CCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEE
Q psy8748 1854 REKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATY 1904 (2004)
Q Consensus 1854 rs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~ 1904 (2004)
.++..+.....|...++++++.|+|.+|++++.||.+++|.+....++...
T Consensus 519 ~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~es 569 (577)
T KOG0642|consen 519 KTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVLES 569 (577)
T ss_pred cccccchheeeccceecceeecCCCceEEeecCCceeehhhccchheeecc
Confidence 999999999999999999999999999999999999999998766655444
No 190
>KOG1009|consensus
Probab=99.54 E-value=3.2e-13 Score=159.42 Aligned_cols=289 Identities=21% Similarity=0.263 Sum_probs=197.0
Q ss_pred CCCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCC
Q psy8748 1550 APEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKP 1629 (2004)
Q Consensus 1550 a~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~sp 1629 (2004)
...+|.+.|+++.|+|+|+.||| |+++|+|.+|.... .+ . + +
T Consensus 60 ~Ls~H~~aVN~vRf~p~gelLAS-g~D~g~v~lWk~~~-------------~~-------------~-----~------~ 101 (434)
T KOG1009|consen 60 SLSRHTRAVNVVRFSPDGELLAS-GGDGGEVFLWKQGD-------------VR-------------I-----F------D 101 (434)
T ss_pred cccCCcceeEEEEEcCCcCeeee-cCCCceEEEEEecC-------------cC-------------C-----c------c
Confidence 34568999999999999999999 99999999999765 00 0 0 0
Q ss_pred CCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCEEEE
Q psy8748 1630 TSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVS 1709 (2004)
Q Consensus 1630 dgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~LAS 1709 (2004)
... .....+-.|...+.+.+|...|..++|+||+.++++
T Consensus 102 ~d~-----------------------------------------e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s 140 (434)
T KOG1009|consen 102 ADT-----------------------------------------EADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVS 140 (434)
T ss_pred ccc-----------------------------------------hhhhCccceEEEEEecccccchhhhhccCCCceeee
Confidence 000 000011235567789999999999999999999999
Q ss_pred EeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccce-eee
Q psy8748 1710 GSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFL-SSC 1788 (2004)
Q Consensus 1710 GS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~V-ssv 1788 (2004)
|+-|..+++||+..|.....+..|...+..++|.|-++++++-+.|...+.+.+.... ....+...+ ..-
T Consensus 141 ~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~---------~~~~~~~~~m~~~ 211 (434)
T KOG1009|consen 141 GSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQ---------VIKRHGLDIMPAK 211 (434)
T ss_pred eeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeee---------eeeeeeeeEeeec
Confidence 9999999999999999999999999999999999999999999999877777664321 111111000 000
Q ss_pred EEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEEC----CC-----eEEEEECCC-CeE
Q psy8748 1789 RFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSV----DK-----SCKLWDFRE-KKC 1858 (2004)
Q Consensus 1789 afsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~----DG-----sIrIWDlrs-~k~ 1858 (2004)
.+ ........+++.-++.+. -...++|+|+|..+++... +| ..++|+-.. .++
T Consensus 212 ~~-------~~~e~~s~rLfhDeTlks----------FFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP 274 (434)
T KOG1009|consen 212 AF-------NEREGKSTRLFHDETLKS----------FFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRP 274 (434)
T ss_pred cc-------CCCCcceeeeeecCchhh----------hhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCc
Confidence 00 011122233443333222 2445788899988887532 12 234554332 233
Q ss_pred EEEEecCCCCeEEEEEeC------------------CCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcC
Q psy8748 1859 VQTFFGHEADVNSVCFHP------------------SGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSS 1920 (2004)
Q Consensus 1859 I~tl~~h~s~ItsIafSP------------------dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSP 1920 (2004)
...+.....+...+.|+| -+-.++.++ ...|.+||.++-.+..... .-|...++.++|++
T Consensus 275 ~~~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lpyrlvfaiAt-~~svyvydtq~~~P~~~v~-nihy~~iTDiaws~ 352 (434)
T KOG1009|consen 275 AARLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLPYRLVFAIAT-KNSVYVYDTQTLEPLAVVD-NIHYSAITDIAWSD 352 (434)
T ss_pred eeecCCCCcceEEEEeeeeEEEeccccccccccccccceEEEEee-cceEEEeccccccceEEEe-eeeeeeecceeecC
Confidence 444555555555555554 223455665 5579999998877766553 34567899999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeee
Q psy8748 1921 SGRYIFCGSDDNNVHVWDLLKTTHN 1945 (2004)
Q Consensus 1921 dG~~LaSGSsDGsIrIWDL~tge~l 1945 (2004)
||.+++..+.||...+..++.++.-
T Consensus 353 dg~~l~vSS~DGyCS~vtfe~~elg 377 (434)
T KOG1009|consen 353 DGSVLLVSSTDGFCSLVTFEPWELG 377 (434)
T ss_pred CCcEEEEeccCCceEEEEEcchhcc
Confidence 9999999999998888777665543
No 191
>KOG0649|consensus
Probab=99.53 E-value=1.4e-12 Score=145.48 Aligned_cols=240 Identities=18% Similarity=0.284 Sum_probs=181.7
Q ss_pred ceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCC----CcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECC
Q psy8748 1736 WVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDST----GAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLE 1811 (2004)
Q Consensus 1736 ~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~----~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~ 1811 (2004)
.|.+-+|+|.+++|++|..+|.|.+..+...... .....+....+|++++..++|.+ ..+++|+ ||.|+-|..+
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d-~~Lls~g-dG~V~gw~W~ 89 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD-DFLLSGG-DGLVYGWEWN 89 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh-hheeecc-CceEEEeeeh
Confidence 3556688999999999999999999998753221 12233445588999999999983 3455554 4999999765
Q ss_pred CCce------eEE-eec-----cccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCC
Q psy8748 1812 TGQR------IHE-VAQ-----AHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGL 1879 (2004)
Q Consensus 1812 tg~~------i~~-il~-----~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~ 1879 (2004)
.... ..+ ... ..-..|.++...|..+-++.++.|+.++.||+++|+..+++++|.+.|.++.--....
T Consensus 90 E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~ 169 (325)
T KOG0649|consen 90 EEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANG 169 (325)
T ss_pred hhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCc
Confidence 4321 000 011 1234688999999888777777899999999999999999999999999999866666
Q ss_pred EEEEEECCCeEEEEEccCCceeEEEcCCCC--------CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccC
Q psy8748 1880 AFATGSEDKTARLFDIRADQQIATYLPPNK--------NSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGH 1951 (2004)
Q Consensus 1880 ~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~--------~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gH 1951 (2004)
.+++|++||++++||.++++.+..+....+ ...|-+ ..-+..++++|+. -.+.+|+++..++...+. -
T Consensus 170 qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wiga--la~~edWlvCGgG-p~lslwhLrsse~t~vfp-i 245 (325)
T KOG0649|consen 170 QILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGA--LAVNEDWLVCGGG-PKLSLWHLRSSESTCVFP-I 245 (325)
T ss_pred ceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEE--EeccCceEEecCC-CceeEEeccCCCceEEEe-c
Confidence 799999999999999999999888744332 223444 4446678888754 469999999988887775 3
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q psy8748 1952 ENRVTSISLSPNGMALVTSSWDQFVKVWQESN 1983 (2004)
Q Consensus 1952 s~~VtsLaFSPDg~~LaSgS~DGtIrIWdlst 1983 (2004)
..+|..+.|.. +.++++|..+.|.-|.+.+
T Consensus 246 pa~v~~v~F~~--d~vl~~G~g~~v~~~~l~G 275 (325)
T KOG0649|consen 246 PARVHLVDFVD--DCVLIGGEGNHVQSYTLNG 275 (325)
T ss_pred ccceeEeeeec--ceEEEeccccceeeeeecc
Confidence 56788888854 4688888888899998876
No 192
>KOG4227|consensus
Probab=99.50 E-value=9.7e-13 Score=153.13 Aligned_cols=295 Identities=17% Similarity=0.186 Sum_probs=213.5
Q ss_pred CCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCC
Q psy8748 1551 PEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPT 1630 (2004)
Q Consensus 1551 ~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spd 1630 (2004)
...|.+.|+++.||-+|+|||+ |++|..+++|.+.. +. .. .
T Consensus 52 ~~~H~GCiNAlqFS~N~~~L~S-GGDD~~~~~W~~de---~~----------------------~~-k------------ 92 (609)
T KOG4227|consen 52 VREHTGCINALQFSHNDRFLAS-GGDDMHGRVWNVDE---LM----------------------VR-K------------ 92 (609)
T ss_pred hhhhccccceeeeccCCeEEee-cCCcceeeeechHH---HH----------------------hh-c------------
Confidence 3459999999999999999999 99999999999977 00 00 0
Q ss_pred CcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccc-cccccceeEEEEeCCCCEEEE
Q psy8748 1631 SSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSL-KGHINKVNSVHYSGDSRHCVS 1709 (2004)
Q Consensus 1631 gSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL-~GHt~~VtsLaFSPDG~~LAS 1709 (2004)
. .+|+... ..|...|.|++|....+++.+
T Consensus 93 -------------------------------------------~-------~KPI~~~~~~H~SNIF~L~F~~~N~~~~S 122 (609)
T KOG4227|consen 93 -------------------------------------------T-------PKPIGVMEHPHRSNIFSLEFDLENRFLYS 122 (609)
T ss_pred -------------------------------------------C-------CCCceeccCccccceEEEEEccCCeeEec
Confidence 0 0011111 136789999999999999999
Q ss_pred EeCCCeEEEEECCCCceEEEeeC--CCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceee
Q psy8748 1710 GSLDGKLIIWDTWTGNKTQVIPL--RSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSS 1787 (2004)
Q Consensus 1710 GS~DGtIrVWDl~Tgk~l~ti~~--Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vss 1787 (2004)
|+.+|+|...|+++.+.+..+.. ..+.|+.+..+|..+.+++.+.+|.|.+||......... . ............
T Consensus 123 G~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~--~-~~~AN~~~~F~t 199 (609)
T KOG4227|consen 123 GERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPIS--L-VLPANSGKNFYT 199 (609)
T ss_pred CCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCc--e-eeecCCCcccee
Confidence 99999999999999988887753 346899999999999999999999999999976432211 1 112233455666
Q ss_pred eEEeCC--CcEEEeecCCeEEEEECCCCceeEEe---ecccc---CCeEEEEECCCCCEEEEEECCCeEEEEECCCCeE-
Q psy8748 1788 CRFIDD--TTLLTGSGDMKIVTWNLETGQRIHEV---AQAHI---GDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKC- 1858 (2004)
Q Consensus 1788 vafsdd--~~LlSgS~DGtI~IWDl~tg~~i~~i---l~~h~---~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~- 1858 (2004)
+.|.+. ..+++.+..|.+-+||++..+..... ..+.. ..-.+..|+|.|+.|.+--....-.+||+.+..+
T Consensus 200 ~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~ 279 (609)
T KOG4227|consen 200 AEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCF 279 (609)
T ss_pred eeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccce
Confidence 677754 45788888999999999865432111 11222 2236788999999998877766777888877544
Q ss_pred EEEEecCC-------CCeEEEEEeCCCCEEEEEECCCeEEEEEccCCce------eE---------------EEcCCCCC
Q psy8748 1859 VQTFFGHE-------ADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQ------IA---------------TYLPPNKN 1910 (2004)
Q Consensus 1859 I~tl~~h~-------s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~------i~---------------t~~~~~~~ 1910 (2004)
+..+ .|. ..+.+++|..+- .+++|+.+-.|++|.+..... +. .....+|.
T Consensus 280 V~k~-D~N~~GY~N~~T~KS~~F~~D~-~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHR 357 (609)
T KOG4227|consen 280 VLKS-DHNPNGYCNIKTIKSMTFIDDY-TVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHR 357 (609)
T ss_pred eEec-cCCCCcceeeeeeeeeeeecce-eeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEeccc
Confidence 3333 222 245677777554 499999999999998742111 00 01224667
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1911 SGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1911 s~ItsLafSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
..+..+.|+|...+|++.+-.+.+++|.-
T Consensus 358 Sv~NQVRF~~H~~~l~SSGVE~~~KlWS~ 386 (609)
T KOG4227|consen 358 SVPNQVRFSQHNNLLVSSGVENSFKLWSD 386 (609)
T ss_pred ccccceeecCCcceEeccchhhheecccc
Confidence 77889999999999999999999999974
No 193
>KOG1517|consensus
Probab=99.49 E-value=3.5e-12 Score=162.59 Aligned_cols=243 Identities=17% Similarity=0.245 Sum_probs=170.6
Q ss_pred cceeEEEEeC--CCCEEEEEeCCCeEEEEEC-CCC----ceEEEeeC-------CCCceEEEEEecCCCEEEEeecCCeE
Q psy8748 1693 NKVNSVHYSG--DSRHCVSGSLDGKLIIWDT-WTG----NKTQVIPL-------RSAWVMSVAFAQSGNFVACGGMDNMC 1758 (2004)
Q Consensus 1693 ~~VtsLaFSP--DG~~LASGS~DGtIrVWDl-~Tg----k~l~ti~~-------Ht~~ItsLafSPdg~~LaSGS~DGtI 1758 (2004)
..|+.+.+-. |...+++|+.||.|+||+- .++ +.+..+.+ ..+.-.-+.|.....+|+++|.-..|
T Consensus 1110 t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~I 1189 (1387)
T KOG1517|consen 1110 TRVSDLELINEQDDALLLTASSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSI 1189 (1387)
T ss_pred CccceeeeecccchhheeeeccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEE
Confidence 3566777653 4558999999999999953 222 22322211 11212445787777777777778899
Q ss_pred EEEEcCCCCCCCcceEEEEEecCccceeeeEEe--CCCcEEEeecCCeEEEEECCCCce--eEEeeccccCC--eEEEEE
Q psy8748 1759 TVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI--DDTTLLTGSGDMKIVTWNLETGQR--IHEVAQAHIGD--VVSISL 1832 (2004)
Q Consensus 1759 rVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs--dd~~LlSgS~DGtI~IWDl~tg~~--i~~il~~h~~~--ItsLaf 1832 (2004)
+|||..... .......+....++++.-. .++.+++|..||.|++||.+.... .....+.|... |..+.+
T Consensus 1190 RIWDa~~E~-----~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~sl 1264 (1387)
T KOG1517|consen 1190 RIWDAHKEQ-----VVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSL 1264 (1387)
T ss_pred EEEecccce-----eEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEe
Confidence 999997532 2222223344455555443 467899999999999999986543 44556677776 999999
Q ss_pred CCCCC-EEEEEECCCeEEEEECCCCeE--EEEEecC---CCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcC
Q psy8748 1833 SPDGQ-YFVTGSVDKSCKLWDFREKKC--VQTFFGH---EADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLP 1906 (2004)
Q Consensus 1833 SPdg~-~LaSGS~DGsIrIWDlrs~k~--I~tl~~h---~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~ 1906 (2004)
.+.|- .+++|+.||.|++||++.... ..++..| ++..+++..++....+++|+. +.|.||++... .+..+..
T Consensus 1265 q~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G~-~l~~~k~ 1342 (1387)
T KOG1517|consen 1265 QRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSGE-QLNIIKY 1342 (1387)
T ss_pred ecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecChh-hhccccc
Confidence 98665 599999999999999997422 1222233 235899999999999999987 99999998743 3222211
Q ss_pred -----CCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy8748 1907 -----PNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKT 1942 (2004)
Q Consensus 1907 -----~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tg 1942 (2004)
....+.+.|++|+|..-.+|+|+.|.+|.||...+.
T Consensus 1343 n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~ 1383 (1387)
T KOG1517|consen 1343 NPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKP 1383 (1387)
T ss_pred CcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCc
Confidence 123456799999999999999999999999987554
No 194
>KOG0322|consensus
Probab=99.48 E-value=6e-13 Score=149.98 Aligned_cols=290 Identities=19% Similarity=0.199 Sum_probs=193.1
Q ss_pred CCCCCCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccc
Q psy8748 1547 PTNAPEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLM 1626 (2004)
Q Consensus 1547 pt~a~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll 1626 (2004)
|-.+.++|...|+|+.|..+++ |.+ |..-|.|++|++++ .+....|++
T Consensus 6 P~fvLRp~~~~v~s~~fqa~~r-L~s-g~~~G~V~~w~lqt-------------~r~~~~~r~----------------- 53 (323)
T KOG0322|consen 6 PFFVLRPHSSSVTSVLFQANER-LMS-GLSVGIVKMWVLQT-------------ERDLPLIRL----------------- 53 (323)
T ss_pred CeeEeccccchheehhhccchh-hhc-ccccceEEEEEeec-------------Cccchhhhh-----------------
Confidence 4445557888999999999987 667 99999999999988 221111111
Q ss_pred cCCCCcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCCCE
Q psy8748 1627 MKPTSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRH 1706 (2004)
Q Consensus 1627 ~spdgSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG~~ 1706 (2004)
.|+..|+.+.--|+ ..
T Consensus 54 ---------------------------------------------------------------~g~~~it~lq~~p~-d~ 69 (323)
T KOG0322|consen 54 ---------------------------------------------------------------FGRLFITNLQSIPN-DS 69 (323)
T ss_pred ---------------------------------------------------------------hccceeeceeecCC-cc
Confidence 25566777777776 56
Q ss_pred EEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecC-----CC---EEEEeecCCe--EEEEEcCCCCCCCcceEEE
Q psy8748 1707 CVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQS-----GN---FVACGGMDNM--CTVYDLNNRDSTGAAKVIR 1776 (2004)
Q Consensus 1707 LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPd-----g~---~LaSGS~DGt--IrVWDl~t~~~~~~~k~i~ 1776 (2004)
+.+-+.|+.+.+|++.-+..+.. |.-.+.++.|++. ++ .++..-..|. +.+-|. +......-...
T Consensus 70 l~tqgRd~~L~lw~ia~s~~i~i---~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~--g~~tqv~i~dd 144 (323)
T KOG0322|consen 70 LDTQGRDPLLILWTIAYSAFISI---HSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDG--GDTTQVQIADD 144 (323)
T ss_pred hhhcCCCceEEEEEccCcceEEE---eeeeccccccccceeccCCCcchhheecCCcccchhhhhcc--CccceeEccCc
Confidence 88888999999999877554432 3333444444421 11 1111111110 011110 00000000000
Q ss_pred EEecCccceeeeEEe--CCC--cEEEeecCCeEEEEECCCCceeEEe---------eccccCCeEEEEECCCCCEEEEEE
Q psy8748 1777 ELLGYEGFLSSCRFI--DDT--TLLTGSGDMKIVTWNLETGQRIHEV---------AQAHIGDVVSISLSPDGQYFVTGS 1843 (2004)
Q Consensus 1777 sl~gh~~~Vssvafs--dd~--~LlSgS~DGtI~IWDl~tg~~i~~i---------l~~h~~~ItsLafSPdg~~LaSGS 1843 (2004)
...+..+.+.+..+. .+. .+++|.++|.+.+||+.++..+..+ ...|..+|.++.+.+....=++|+
T Consensus 145 ~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgg 224 (323)
T KOG0322|consen 145 SERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGG 224 (323)
T ss_pred hhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCC
Confidence 111223444444432 222 3778889999999999997443222 356889999999988666667888
Q ss_pred CCCeEEEEECCCC--eE--EEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEc
Q psy8748 1844 VDKSCKLWDFREK--KC--VQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVS 1919 (2004)
Q Consensus 1844 ~DGsIrIWDlrs~--k~--I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafS 1919 (2004)
.+..+..|.+... .. -....-.+..|..+.+-||++.+++++.||+|+||+.++...+..+. .|...|.+++|+
T Consensus 225 a~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLk--yHsagvn~vAfs 302 (323)
T KOG0322|consen 225 ADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLK--YHSAGVNAVAFS 302 (323)
T ss_pred ccccceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhh--hhhcceeEEEeC
Confidence 8888999987643 21 12222334568889999999999999999999999999999988774 455889999999
Q ss_pred CCCCEEEEEeCCCeEEEEEC
Q psy8748 1920 SSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1920 PdG~~LaSGSsDGsIrIWDL 1939 (2004)
|+...+|+++.|++|.+|++
T Consensus 303 pd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 303 PDCELMAAASKDARISLWKL 322 (323)
T ss_pred CCCchhhhccCCceEEeeec
Confidence 99999999999999999986
No 195
>KOG1523|consensus
Probab=99.46 E-value=4.2e-12 Score=146.58 Aligned_cols=208 Identities=16% Similarity=0.218 Sum_probs=170.1
Q ss_pred cccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCC---ceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCC
Q psy8748 1689 KGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTG---NKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNN 1765 (2004)
Q Consensus 1689 ~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tg---k~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t 1765 (2004)
.--..+|+|.+|++|++.+|.+.....|.||..... +..++++.|...|++++|+|..+.|++|+.|..-++|....
T Consensus 7 ~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~ 86 (361)
T KOG1523|consen 7 HRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPS 86 (361)
T ss_pred eeccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCC
Confidence 334579999999999999999999999999986654 46778899999999999999999999999999999999854
Q ss_pred CCCCCcceEEEEEecCccceeeeEEeCC-CcEEEeecCCeEEEEECCCCcee---EEeeccccCCeEEEEECCCCCEEEE
Q psy8748 1766 RDSTGAAKVIRELLGYEGFLSSCRFIDD-TTLLTGSGDMKIVTWNLETGQRI---HEVAQAHIGDVVSISLSPDGQYFVT 1841 (2004)
Q Consensus 1766 ~~~~~~~k~i~sl~gh~~~Vssvafsdd-~~LlSgS~DGtI~IWDl~tg~~i---~~il~~h~~~ItsLafSPdg~~LaS 1841 (2004)
+. ..+....+..+....+++.|++. +.|++|+....|.+|-++....- +.+.+.+...|+++.|+|++-++++
T Consensus 87 ~~---~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaa 163 (361)
T KOG1523|consen 87 GG---TWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAA 163 (361)
T ss_pred CC---eeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceecc
Confidence 32 55566667778889999999964 56999999999999987654321 2334567788999999999999999
Q ss_pred EECCCeEEEEECC-----C-------------CeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCc
Q psy8748 1842 GSVDKSCKLWDFR-----E-------------KKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQ 1899 (2004)
Q Consensus 1842 GS~DGsIrIWDlr-----s-------------~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk 1899 (2004)
|+.|+..+++..- . |+.+..+....+.+..+.|+|+|+.|+-.+.|+.+.+-|.....
T Consensus 164 Gs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 164 GSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred cccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhhccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 9999999998631 1 22333444566789999999999999999999999999977654
No 196
>KOG1524|consensus
Probab=99.45 E-value=3e-12 Score=154.07 Aligned_cols=208 Identities=20% Similarity=0.262 Sum_probs=165.8
Q ss_pred CEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccc
Q psy8748 1705 RHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGF 1784 (2004)
Q Consensus 1705 ~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~ 1784 (2004)
..++.++.||.+.+.+ +.|+....+..|.+.|.+-.|+|+|.-|+++|.||.|++|.-.. -...++......
T Consensus 76 d~~~i~s~DGkf~il~-k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsG-------MLRStl~Q~~~~ 147 (737)
T KOG1524|consen 76 DTLLICSNDGRFVILN-KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSG-------MLRSTVVQNEES 147 (737)
T ss_pred ceEEEEcCCceEEEec-ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccc-------hHHHHHhhcCce
Confidence 4678888899999987 67888888999999999999999999999999999999998643 222234445678
Q ss_pred eeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEec
Q psy8748 1785 LSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFG 1864 (2004)
Q Consensus 1785 Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~ 1864 (2004)
|.|++|.++..-+.-+..+.+.+=-+.....+ ...+.|.+-|.++.|++..+.+++|+.|-..++||- .|..+..-..
T Consensus 148 v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~-i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~ 225 (737)
T KOG1524|consen 148 IRCARWAPNSNSIVFCQGGHISIKPLAANSKI-IRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSAA 225 (737)
T ss_pred eEEEEECCCCCceEEecCCeEEEeecccccce-eEEeccCcEEEEeecCccccceeecCCceeEEeecc-cCcccccCCh
Confidence 99999997765444455567777666555544 335789999999999999999999999999999996 4666667778
Q ss_pred CCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEE
Q psy8748 1865 HEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVW 1937 (2004)
Q Consensus 1865 h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIW 1937 (2004)
|+.+|++++|.|+ ..++.|+.+ +.+ +. ....+.|..++|++||..+++|+..|.+.+=
T Consensus 226 ~ey~ITSva~npd-~~~~v~S~n-t~R------------~~-~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~A 283 (737)
T KOG1524|consen 226 EEYAITSVAFNPE-KDYLLWSYN-TAR------------FS-SPRVGSIFNLSWSADGTQATCGTSTGQLIVA 283 (737)
T ss_pred hccceeeeeeccc-cceeeeeee-eee------------ec-CCCccceEEEEEcCCCceeeccccCceEEEe
Confidence 9999999999999 667777642 333 22 2344678999999999999999999987653
No 197
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.44 E-value=5.8e-11 Score=146.86 Aligned_cols=297 Identities=15% Similarity=0.173 Sum_probs=192.5
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEee-cCCeEEEEEc
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGG-MDNMCTVYDL 1763 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS-~DGtIrVWDl 1763 (2004)
+..+......-..+.|+|||+++++++.||.|.++|+.+++.+.+++.... ..++++++||+++++++ ..+.+.++|.
T Consensus 29 ~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~-~~~i~~s~DG~~~~v~n~~~~~v~v~D~ 107 (369)
T PF02239_consen 29 VARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGN-PRGIAVSPDGKYVYVANYEPGTVSVIDA 107 (369)
T ss_dssp EEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSE-EEEEEE--TTTEEEEEEEETTEEEEEET
T ss_pred EEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCC-cceEEEcCCCCEEEEEecCCCceeEecc
Confidence 445554434444578999999999999999999999999999999986554 67899999999998775 5799999998
Q ss_pred CCCCCCCcceEEEEEec-------CccceeeeEEeCCCc-EEEe-ecCCeEEEEECCCCceeEEeeccccCCeEEEEECC
Q psy8748 1764 NNRDSTGAAKVIRELLG-------YEGFLSSCRFIDDTT-LLTG-SGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP 1834 (2004)
Q Consensus 1764 ~t~~~~~~~k~i~sl~g-------h~~~Vssvafsdd~~-LlSg-S~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP 1834 (2004)
++.+ .++.+.. ....+..+..++... ++.. -+.+.|.+.|....+.................|+|
T Consensus 108 ~tle------~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dp 181 (369)
T PF02239_consen 108 ETLE------PVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDP 181 (369)
T ss_dssp TT--------EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-T
T ss_pred cccc------ceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCc
Confidence 7653 3333222 233455565554443 4444 44589999998776544333334455677899999
Q ss_pred CCCEEEEE-ECCCeEEEEECCCCeEEEEEec----CCCCeEEE-------EEeC--CCCEEEEEECCCeEEEEEccCCce
Q psy8748 1835 DGQYFVTG-SVDKSCKLWDFREKKCVQTFFG----HEADVNSV-------CFHP--SGLAFATGSEDKTARLFDIRADQQ 1900 (2004)
Q Consensus 1835 dg~~LaSG-S~DGsIrIWDlrs~k~I~tl~~----h~s~ItsI-------afSP--dg~~LaSgS~DGtIrIWDLrtgk~ 1900 (2004)
++++++++ ..++.|.++|..+++.+..+.. |..++..+ .|.. .+...++.-..+.+.+||..+++.
T Consensus 182 dgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wkv 261 (369)
T PF02239_consen 182 DGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWKV 261 (369)
T ss_dssp TSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTSE
T ss_pred ccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcceEEeeccccceecccccCCccccchhhcCeE
Confidence 99988775 4567899999999887766532 33333332 1211 222222222334567889999999
Q ss_pred eEEEcCCCCCCCeEEEEEcCCCCEEEEE----eCCCeEEEEECCCCeeeEEEccC-CCCeEEEEEcCCCCEEEEEECC--
Q psy8748 1901 IATYLPPNKNSGFTSCAVSSSGRYIFCG----SDDNNVHVWDLLKTTHNGVLSGH-ENRVTSISLSPNGMALVTSSWD-- 1973 (2004)
Q Consensus 1901 i~t~~~~~~~s~ItsLafSPdG~~LaSG----SsDGsIrIWDL~tge~l~tL~gH-s~~VtsLaFSPDg~~LaSgS~D-- 1973 (2004)
+.++...+ .+ ..+..+|+++++.+. ...++|.++|.++.+....+... ...+..+.|+++|+.+..+.+|
T Consensus 262 v~~I~~~G--~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~ 338 (369)
T PF02239_consen 262 VKTIPTQG--GG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGN 338 (369)
T ss_dssp EEEEE-SS--SS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--T
T ss_pred EEEEECCC--Cc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEEEEEecCC
Confidence 98886543 34 778899999999998 44589999999999888877532 3469999999999987666554
Q ss_pred CeEEEEECCCCeEEEEEE
Q psy8748 1974 QFVKVWQESNTIVWKVLK 1991 (2004)
Q Consensus 1974 GtIrIWdlstg~l~k~Ik 1991 (2004)
|.|.+||..+.+..+.+.
T Consensus 339 ~~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 339 GAIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp TEEEEEETTTTEEEEEEE
T ss_pred CEEEEEECCCcEEEEEEE
Confidence 469999999998888877
No 198
>KOG1524|consensus
Probab=99.44 E-value=3e-12 Score=154.11 Aligned_cols=262 Identities=16% Similarity=0.195 Sum_probs=189.3
Q ss_pred ccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEE-ec-------CCCEEEEeecCCeEEEE
Q psy8748 1690 GHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAF-AQ-------SGNFVACGGMDNMCTVY 1761 (2004)
Q Consensus 1690 GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLaf-SP-------dg~~LaSGS~DGtIrVW 1761 (2004)
.|...|.|+.|+.+...+.+++ |..+.+|.-.+.............|....+ -+ ....++.++.||.+.+.
T Consensus 12 r~~e~vc~v~w~~~eei~~~~d-Dh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il 90 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSD-DHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVIL 90 (737)
T ss_pred ccceeEEeecccccceEEEecc-CceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEe
Confidence 4777888999998887666665 455555543333332222222222221111 11 23478888999999888
Q ss_pred EcCCCCCCCcceEEEEEecCccceeeeEEeCCC-cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEE
Q psy8748 1762 DLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFV 1840 (2004)
Q Consensus 1762 Dl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~La 1840 (2004)
+-. .+..+....|.+.+.+-.|++++ -+++++.||.|++|.-... . .........+|.|++|.|+.+.++
T Consensus 91 ~k~-------~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsGM-L-RStl~Q~~~~v~c~~W~p~S~~vl 161 (737)
T KOG1524|consen 91 NKS-------ARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSGM-L-RSTVVQNEESIRCARWAPNSNSIV 161 (737)
T ss_pred ccc-------chhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccch-H-HHHHhhcCceeEEEEECCCCCceE
Confidence 653 34556677899999999998655 5999999999999985432 2 123334567899999999877665
Q ss_pred EEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcC
Q psy8748 1841 TGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSS 1920 (2004)
Q Consensus 1841 SGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSP 1920 (2004)
.+- .|.+.|=.+.....+..+++|.+-|.++.|++..+.+++|++|-+.++||-. |..+. ....|..+|++++|.|
T Consensus 162 ~c~-g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf--~S~~~ey~ITSva~np 237 (737)
T KOG1524|consen 162 FCQ-GGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLF--TSAAEEYAITSVAFNP 237 (737)
T ss_pred Eec-CCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc-Ccccc--cCChhccceeeeeecc
Confidence 543 4677887777777788899999999999999999999999999999999965 44443 3356778999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEE
Q psy8748 1921 SGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKV 1978 (2004)
Q Consensus 1921 dG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrI 1978 (2004)
+ ..++.|+.+ +.+ --+...+.|..++|++||..++.|...|.+.+
T Consensus 238 d-~~~~v~S~n-t~R-----------~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 238 E-KDYLLWSYN-TAR-----------FSSPRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred c-cceeeeeee-eee-----------ecCCCccceEEEEEcCCCceeeccccCceEEE
Confidence 9 666666543 344 11345688999999999999999999887765
No 199
>KOG2394|consensus
Probab=99.43 E-value=4.2e-12 Score=153.61 Aligned_cols=191 Identities=20% Similarity=0.316 Sum_probs=149.3
Q ss_pred cEEEeecCCeEEEEECCCCceeEEe---eccccCCeEEEEECC-CCCEEEEEECCCeEEEEECCC--------------C
Q psy8748 1795 TLLTGSGDMKIVTWNLETGQRIHEV---AQAHIGDVVSISLSP-DGQYFVTGSVDKSCKLWDFRE--------------K 1856 (2004)
Q Consensus 1795 ~LlSgS~DGtI~IWDl~tg~~i~~i---l~~h~~~ItsLafSP-dg~~LaSGS~DGsIrIWDlrs--------------~ 1856 (2004)
.+++|-.-|.|+++|....+....+ ..-.+..++|+.|-| +...|+++-.+|.+++||..- +
T Consensus 187 dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~ 266 (636)
T KOG2394|consen 187 DLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDG 266 (636)
T ss_pred ceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCC
Confidence 4889999999999998663221111 112346799999999 445777888899999997531 1
Q ss_pred --------------eEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCC
Q psy8748 1857 --------------KCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSG 1922 (2004)
Q Consensus 1857 --------------k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG 1922 (2004)
.++..+.-..+.|..++|+|||++|++.+.||.++|||..+.+..... ...-+...|++|+|||
T Consensus 267 ~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~m--kSYFGGLLCvcWSPDG 344 (636)
T KOG2394|consen 267 DQFAILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVM--KSYFGGLLCVCWSPDG 344 (636)
T ss_pred CeeEEeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHHH--HhhccceEEEEEcCCc
Confidence 112222223457889999999999999999999999999887765544 2334679999999999
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCC-----------------------------------C---
Q psy8748 1923 RYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPN-----------------------------------G--- 1964 (2004)
Q Consensus 1923 ~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPD-----------------------------------g--- 1964 (2004)
+||++|++|--|.||.+...+.+..-.+|...|+.|+|.|- +
T Consensus 345 KyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDpytt~~ee~~~~~~~~~~~~~~~~~~~~r~~~~~S~~~~~~ 424 (636)
T KOG2394|consen 345 KYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDPYTTSTEEWNNFSGMDSTFSDVAHDFEIRANGTGSAEGCPL 424 (636)
T ss_pred cEEEecCCcceEEEEEeccceEEEeccccccceeeEeecccccccccccccccccccccchhcccccccCCCCCcCCCcc
Confidence 99999999999999999999999999999999999999830 1
Q ss_pred ----------CEEEEEECCCeEEEEECCCCeEE
Q psy8748 1965 ----------MALVTSSWDQFVKVWQESNTIVW 1987 (2004)
Q Consensus 1965 ----------~~LaSgS~DGtIrIWdlstg~l~ 1987 (2004)
-.+.+.|.|-.+++||+....+.
T Consensus 425 s~~~~~~~v~YRfGSVGqDTqlcLWDlteD~L~ 457 (636)
T KOG2394|consen 425 SSFNRINSVTYRFGSVGQDTQLCLWDLTEDVLV 457 (636)
T ss_pred cccccccceEEEeecccccceEEEEecchhhcc
Confidence 14778899999999999987543
No 200
>KOG0290|consensus
Probab=99.43 E-value=1.1e-11 Score=141.23 Aligned_cols=246 Identities=18% Similarity=0.290 Sum_probs=181.4
Q ss_pred CceEEEEEec--C-CCEEEEeec----CCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCc-----EEEeecC
Q psy8748 1735 AWVMSVAFAQ--S-GNFVACGGM----DNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTT-----LLTGSGD 1802 (2004)
Q Consensus 1735 ~~ItsLafSP--d-g~~LaSGS~----DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~-----LlSgS~D 1802 (2004)
-.+.++.|+. + +.+++.|+. .+.|.+..++... .+ ........|.-+++.+.|.++.. +++ +.+
T Consensus 45 ~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s--~e-~~~~a~fd~~YP~tK~~wiPd~~g~~pdlLA-Ts~ 120 (364)
T KOG0290|consen 45 WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDS--GE-LVEDANFDHPYPVTKLMWIPDSKGVYPDLLA-TSS 120 (364)
T ss_pred CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCC--Cc-eeccCCCCCCCCccceEecCCccccCcchhh-ccc
Confidence 4578888874 2 346777764 3567777665321 11 11122256778888999986652 333 344
Q ss_pred CeEEEEECCCCc--eeE------EeeccccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCeE---EEEEecCCCCeE
Q psy8748 1803 MKIVTWNLETGQ--RIH------EVAQAHIGDVVSISLSP-DGQYFVTGSVDKSCKLWDFREKKC---VQTFFGHEADVN 1870 (2004)
Q Consensus 1803 GtI~IWDl~tg~--~i~------~il~~h~~~ItsLafSP-dg~~LaSGS~DGsIrIWDlrs~k~---I~tl~~h~s~It 1870 (2004)
..+++|.+.... ... .....+..++++..|+. +.+++.+++-|.+..|||+.++.. ...+.+|..+|.
T Consensus 121 D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~ 200 (364)
T KOG0290|consen 121 DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVY 200 (364)
T ss_pred CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCccee
Confidence 579999987422 111 11234667899999987 778999999999999999998633 455679999999
Q ss_pred EEEEeCCC-CEEEEEECCCeEEEEEccCCceeEEEc-CCCCCCCeEEEEEcC-CCCEEEEEeCC-CeEEEEECCC-Ceee
Q psy8748 1871 SVCFHPSG-LAFATGSEDKTARLFDIRADQQIATYL-PPNKNSGFTSCAVSS-SGRYIFCGSDD-NNVHVWDLLK-TTHN 1945 (2004)
Q Consensus 1871 sIafSPdg-~~LaSgS~DGtIrIWDLrtgk~i~t~~-~~~~~s~ItsLafSP-dG~~LaSGSsD-GsIrIWDL~t-ge~l 1945 (2004)
.|+|...+ +.|++.+.||.||+||++.......+. .+....+...++|++ |-+++|+-..| ..|.|.|++. ..++
T Consensus 201 DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpv 280 (364)
T KOG0290|consen 201 DIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPV 280 (364)
T ss_pred EEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcce
Confidence 99999855 478999999999999999766544443 333357788999998 55777765554 5699999986 5678
Q ss_pred EEEccCCCCeEEEEEcCC-CCEEEEEECCCeEEEEECCCC
Q psy8748 1946 GVLSGHENRVTSISLSPN-GMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1946 ~tL~gHs~~VtsLaFSPD-g~~LaSgS~DGtIrIWdlstg 1984 (2004)
..+++|.+.|++++|.|. +..|++||+|..+-+||+...
T Consensus 281 a~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~ 320 (364)
T KOG0290|consen 281 ARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQM 320 (364)
T ss_pred ehhhcCcccccceEecCCCCceeeecCCcceEEEEecccc
Confidence 899999999999999995 568999999999999999753
No 201
>KOG2110|consensus
Probab=99.43 E-value=3.6e-11 Score=141.34 Aligned_cols=237 Identities=14% Similarity=0.173 Sum_probs=177.9
Q ss_pred CCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEe-ecCCeEEEEECCC
Q psy8748 1734 SAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTG-SGDMKIVTWNLET 1812 (2004)
Q Consensus 1734 t~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSg-S~DGtI~IWDl~t 1812 (2004)
...+..+.|..+...|..|+.|| -++|..+... + ..........|.-+-|+..-..+++ ...+.+++++.+.
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~G-yk~~~~~~~~-----k-~~~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk 77 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDG-YKIFSCSPFE-----K-CFSKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKK 77 (391)
T ss_pred CcceeeeeeccceeEEEccCCCc-eeEEecCchH-----H-hhcccCCCeEEEEeecccceeEEEecCCCceEEEEEccc
Confidence 34577778999999999999999 6888776432 1 1111112233444444433332222 2235699999998
Q ss_pred CceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecC---CCCeEEEEEeCCCCEEEEEE--CC
Q psy8748 1813 GQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGH---EADVNSVCFHPSGLAFATGS--ED 1887 (2004)
Q Consensus 1813 g~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h---~s~ItsIafSPdg~~LaSgS--~D 1887 (2004)
+..+..+. ....|.++.++. +.+++.-.+ .|+|||+++.+.+.++... ...+.++.+++.+.+++.-+ ..
T Consensus 78 ~~~ICe~~--fpt~IL~VrmNr--~RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~ 152 (391)
T KOG2110|consen 78 KTTICEIF--FPTSILAVRMNR--KRLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTS 152 (391)
T ss_pred CceEEEEe--cCCceEEEEEcc--ceEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCC
Confidence 88877764 455688998874 456665544 5999999999988887543 34466666666677887643 36
Q ss_pred CeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCe-EEEEECCCCeeeEEEccC--CCCeEEEEEcCCC
Q psy8748 1888 KTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNN-VHVWDLLKTTHNGVLSGH--ENRVTSISLSPNG 1964 (2004)
Q Consensus 1888 GtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGs-IrIWDL~tge~l~tL~gH--s~~VtsLaFSPDg 1964 (2004)
|.|.+||..+-+....+ ..|.+.+.+++|+++|.+||++++.|+ ||||.+.+|+.+..++-. ...|.+++|++++
T Consensus 153 GdV~l~d~~nl~~v~~I--~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds 230 (391)
T KOG2110|consen 153 GDVVLFDTINLQPVNTI--NAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDS 230 (391)
T ss_pred ceEEEEEcccceeeeEE--EecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCC
Confidence 89999999998888888 478899999999999999999999997 799999999999998632 3468999999999
Q ss_pred CEEEEEECCCeEEEEECCCC
Q psy8748 1965 MALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1965 ~~LaSgS~DGtIrIWdlstg 1984 (2004)
.+|++.|..++|++|+++..
T Consensus 231 ~~L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 231 QFLAASSNTETVHIFKLEKV 250 (391)
T ss_pred CeEEEecCCCeEEEEEeccc
Confidence 99999999999999999875
No 202
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.43 E-value=6.6e-12 Score=158.36 Aligned_cols=233 Identities=20% Similarity=0.158 Sum_probs=164.1
Q ss_pred CCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecC---CeEEEEEcCCCCCCCcceEEEEEecCccceeeeE
Q psy8748 1713 DGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMD---NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCR 1789 (2004)
Q Consensus 1713 DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~D---GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssva 1789 (2004)
++.|++||..... .+.+..|...+.+..|+|||+.++.++.+ ..|++||+.++. ...+....+ ......
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~----~~~l~~~~g---~~~~~~ 254 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGA----RKVVASFRG---HNGAPA 254 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCc----eEEEecCCC---ccCcee
Confidence 5789999975444 55667788889999999999999887654 479999997642 122222222 334678
Q ss_pred EeCCC-cEEEe-ecCCeE--EEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEE-CCCeEEEEECCCC-eEEEEEe
Q psy8748 1790 FIDDT-TLLTG-SGDMKI--VTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGS-VDKSCKLWDFREK-KCVQTFF 1863 (2004)
Q Consensus 1790 fsdd~-~LlSg-S~DGtI--~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS-~DGsIrIWDlrs~-k~I~tl~ 1863 (2004)
|++++ .++.+ +.+|.+ ++||+.++... . ...+...+....|+|||+.++.++ .+|...||+++.. .....+
T Consensus 255 wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~-~-lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l- 331 (429)
T PRK01742 255 FSPDGSRLAFASSKDGVLNIYVMGANGGTPS-Q-LTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV- 331 (429)
T ss_pred ECCCCCEEEEEEecCCcEEEEEEECCCCCeE-e-eccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-
Confidence 88665 45554 457765 45576666543 2 335566788999999999877655 5788888876432 222222
Q ss_pred cCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC--CC
Q psy8748 1864 GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL--LK 1941 (2004)
Q Consensus 1864 ~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL--~t 1941 (2004)
.+.. .+..|+|+|+++++++.++ +.+||+.+++...... .. ....+.|+|+|++|+.++.+|.+.+|++ .+
T Consensus 332 ~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~lt~-~~---~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~ 404 (429)
T PRK01742 332 GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEVLSS-TF---LDESPSISPNGIMIIYSSTQGLGKVLQLVSAD 404 (429)
T ss_pred cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEEecC-CC---CCCCceECCCCCEEEEEEcCCCceEEEEEECC
Confidence 3333 4578999999998887765 6669998887543221 11 2346789999999999999998888875 46
Q ss_pred CeeeEEEccCCCCeEEEEEcCC
Q psy8748 1942 TTHNGVLSGHENRVTSISLSPN 1963 (2004)
Q Consensus 1942 ge~l~tL~gHs~~VtsLaFSPD 1963 (2004)
|.....+.+|.+.+...+|+|-
T Consensus 405 G~~~~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 405 GRFKARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred CCceEEccCCCCCCCCcccCCC
Confidence 8888888889999999999984
No 203
>KOG4497|consensus
Probab=99.42 E-value=3.4e-11 Score=138.87 Aligned_cols=272 Identities=19% Similarity=0.254 Sum_probs=182.9
Q ss_pred ceeEEEEeCCCCEEEE-EeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCC-EEEEeecCCeEEEEEcCCCCCCCc
Q psy8748 1694 KVNSVHYSGDSRHCVS-GSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGN-FVACGGMDNMCTVYDLNNRDSTGA 1771 (2004)
Q Consensus 1694 ~VtsLaFSPDG~~LAS-GS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~-~LaSGS~DGtIrVWDl~t~~~~~~ 1771 (2004)
.|.-+.|..|.-+++. ...|+.|.+|++...+-...+....+++.+++|+|||+ .+.+...+-.|.||.+.+..
T Consensus 50 ki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~---- 125 (447)
T KOG4497|consen 50 KIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQK---- 125 (447)
T ss_pred HhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccce----
Confidence 4446677777776554 56688999999999998888988889999999999996 55667778999999997642
Q ss_pred ceEEEEEecCccceeeeEEeCCCcEEEeecCCeE-EEEECCC---CceeEEeeccccCCeEEEEECCCCCEEEEEECCCe
Q psy8748 1772 AKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKI-VTWNLET---GQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKS 1847 (2004)
Q Consensus 1772 ~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI-~IWDl~t---g~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGs 1847 (2004)
..-+.-....+..++|.+++++.+-...... ..+.+.. -..+ +.+.-..-..+.+.|+|||+.+++
T Consensus 126 ---~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~ll-~~f~~dT~DltgieWsPdg~~laV------ 195 (447)
T KOG4497|consen 126 ---GYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWILL-KEFKLDTIDLTGIEWSPDGNWLAV------ 195 (447)
T ss_pred ---eEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHHH-HhcCCCcccccCceECCCCcEEEE------
Confidence 1222233445577888877776554332211 1111111 0111 112233445788999999887765
Q ss_pred EEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEE-----------------------
Q psy8748 1848 CKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATY----------------------- 1904 (2004)
Q Consensus 1848 IrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~----------------------- 1904 (2004)
||.--.-.+..+ ...-.+..+.|+|.++++++|+.|+.+++.+--+.+....+
T Consensus 196 ---wd~~Leykv~aY-e~~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~q 271 (447)
T KOG4497|consen 196 ---WDNVLEYKVYAY-ERGLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQ 271 (447)
T ss_pred ---ecchhhheeeee-eeccceeEEEeccccceEEeeccchhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhh
Confidence 332111111111 12345778899999999999999998888653222111110
Q ss_pred -------------------------------------c----CCCCCCCeEEEEEcCCCCEEEEEeCC--CeEEEEECCC
Q psy8748 1905 -------------------------------------L----PPNKNSGFTSCAVSSSGRYIFCGSDD--NNVHVWDLLK 1941 (2004)
Q Consensus 1905 -------------------------------------~----~~~~~s~ItsLafSPdG~~LaSGSsD--GsIrIWDL~t 1941 (2004)
. .++...++.-++|++|..|+++-.+. +.+.+||+++
T Consensus 272 l~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~ 351 (447)
T KOG4497|consen 272 LLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQN 351 (447)
T ss_pred hcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcccccceeeecCCceEEeeecCCCCceEEEEechh
Confidence 0 01123456678999999999987654 6799999988
Q ss_pred CeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1942 TTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1942 ge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
.+....+. ...+|....|+|....|+.+.....+++|...+.
T Consensus 352 l~l~avLi-Qk~piraf~WdP~~prL~vctg~srLY~W~psg~ 393 (447)
T KOG4497|consen 352 LKLHAVLI-QKHPIRAFEWDPGRPRLVVCTGKSRLYFWAPSGP 393 (447)
T ss_pred hhhhhhhh-hccceeEEEeCCCCceEEEEcCCceEEEEcCCCc
Confidence 77665554 5678999999999999999888888999998874
No 204
>KOG0290|consensus
Probab=99.41 E-value=8.2e-12 Score=142.39 Aligned_cols=237 Identities=18% Similarity=0.247 Sum_probs=179.1
Q ss_pred ccccceeEEEEeCCCC-----EEEEEeCCCeEEEEECCCC--ceE--EE-----eeCCCCceEEEEEec-CCCEEEEeec
Q psy8748 1690 GHINKVNSVHYSGDSR-----HCVSGSLDGKLIIWDTWTG--NKT--QV-----IPLRSAWVMSVAFAQ-SGNFVACGGM 1754 (2004)
Q Consensus 1690 GHt~~VtsLaFSPDG~-----~LASGS~DGtIrVWDl~Tg--k~l--~t-----i~~Ht~~ItsLafSP-dg~~LaSGS~ 1754 (2004)
.|.-+++.+.|.|+.. +|||++ ..+|+|.+... +.. .. -..+.+++++..|+. +.+++.+++-
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSi 171 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSI 171 (364)
T ss_pred CCCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecc
Confidence 4888999999999773 566665 37999988742 211 11 123567899999987 6789999999
Q ss_pred CCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCC--CcEEEeecCCeEEEEECCCCceeEEeeccc--cCCeEEE
Q psy8748 1755 DNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD--TTLLTGSGDMKIVTWNLETGQRIHEVAQAH--IGDVVSI 1830 (2004)
Q Consensus 1755 DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd--~~LlSgS~DGtI~IWDl~tg~~i~~il~~h--~~~ItsL 1830 (2004)
|-+..|||++.+. .+.....+..|...|..++|..+ +.|++.+.||.|++||++..+....+.... ..+...+
T Consensus 172 DTTCTiWdie~~~---~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~pLlRL 248 (364)
T KOG0290|consen 172 DTTCTIWDIETGV---SGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPSTPLLRL 248 (364)
T ss_pred cCeEEEEEEeecc---ccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCCcceee
Confidence 9999999998752 34566778899999999999974 459999999999999999876553443322 4567889
Q ss_pred EECC-CCCEEEEEECC-CeEEEEECCCC-eEEEEEecCCCCeEEEEEeC-CCCEEEEEECCCeEEEEEccCCceeEE---
Q psy8748 1831 SLSP-DGQYFVTGSVD-KSCKLWDFREK-KCVQTFFGHEADVNSVCFHP-SGLAFATGSEDKTARLFDIRADQQIAT--- 1903 (2004)
Q Consensus 1831 afSP-dg~~LaSGS~D-GsIrIWDlrs~-k~I~tl~~h~s~ItsIafSP-dg~~LaSgS~DGtIrIWDLrtgk~i~t--- 1903 (2004)
+|++ |-+++++-..| ..|.|.|++.. .++..+.+|.+.|++|+|.| .+..+++++.|..+.+||+.+.-....
T Consensus 249 swnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dP 328 (364)
T KOG0290|consen 249 SWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDP 328 (364)
T ss_pred ccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEecccccccCCCCc
Confidence 9988 45677776555 46999999864 56888999999999999999 456899999999999999975322000
Q ss_pred EcCCCCCCCeEEEEEcC-CCCEEEEEeCC
Q psy8748 1904 YLPPNKNSGFTSCAVSS-SGRYIFCGSDD 1931 (2004)
Q Consensus 1904 ~~~~~~~s~ItsLafSP-dG~~LaSGSsD 1931 (2004)
+..-.....|..+.|++ .+.+++++...
T Consensus 329 ilay~a~~EVNqi~Ws~~~~Dwiai~~~k 357 (364)
T KOG0290|consen 329 ILAYTAGGEVNQIQWSSSQPDWIAICFGK 357 (364)
T ss_pred hhhhhccceeeeeeecccCCCEEEEEecC
Confidence 01112346799999996 67788887543
No 205
>KOG0771|consensus
Probab=99.41 E-value=1.6e-11 Score=146.39 Aligned_cols=197 Identities=22% Similarity=0.287 Sum_probs=153.9
Q ss_pred eeeEEeC-CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEec
Q psy8748 1786 SSCRFID-DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFG 1864 (2004)
Q Consensus 1786 ssvafsd-d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~ 1864 (2004)
.+++|+. +..+++|+.||.+++|+..+...+.. ...|.+.|.++.|+|||+.|++.+.| ..+||+.+++..+.....
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~-e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~ 225 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILE-EIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTP 225 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhh-hHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCC
Confidence 5677774 47799999999999999776665533 35788999999999999999999999 899999999977666542
Q ss_pred --CCCCeEEEEEeCCC---CE--EEEEECCCeEEEEEccCCce---eEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeE
Q psy8748 1865 --HEADVNSVCFHPSG---LA--FATGSEDKTARLFDIRADQQ---IATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNV 1934 (2004)
Q Consensus 1865 --h~s~ItsIafSPdg---~~--LaSgS~DGtIrIWDLrtgk~---i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsI 1934 (2004)
.......+.|+.++ .+ ++.....+.|+.||+...+. ............|++++.+++|++++.|+.||.|
T Consensus 226 ~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsV 305 (398)
T KOG0771|consen 226 FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSV 305 (398)
T ss_pred cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcE
Confidence 23346677888776 22 33333456677777654332 1111222334579999999999999999999999
Q ss_pred EEEECCCCeeeEEE-ccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1935 HVWDLLKTTHNGVL-SGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1935 rIWDL~tge~l~tL-~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
-|++..+.+.++.. +.|...|+.+.|+||.+++++.+.|..+.+..+.-.
T Consensus 306 ai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~vd 356 (398)
T KOG0771|consen 306 AIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAVD 356 (398)
T ss_pred EEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEeec
Confidence 99999998888766 579999999999999999999999999999988763
No 206
>KOG1007|consensus
Probab=99.41 E-value=1.1e-11 Score=141.04 Aligned_cols=207 Identities=19% Similarity=0.216 Sum_probs=160.6
Q ss_pred ccccccc-ccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCce-EEEee-----CCCCceEEEEEec--CCCEEEEee
Q psy8748 1683 MPKKSLK-GHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNK-TQVIP-----LRSAWVMSVAFAQ--SGNFVACGG 1753 (2004)
Q Consensus 1683 ~pi~sL~-GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~-l~ti~-----~Ht~~ItsLafSP--dg~~LaSGS 1753 (2004)
+.+..|. .|-+.|.|+.|.|++..+++-. |..|.+|++..+.. ...+. .+....++-+|+| +|+.+++.+
T Consensus 113 E~v~~Ldteavg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~ 191 (370)
T KOG1007|consen 113 ECVASLDTEAVGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS 191 (370)
T ss_pred hHhhcCCHHHhCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeC
Confidence 3344454 5667999999999999999876 78999999988766 33332 2455678889998 677777654
Q ss_pred cCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCC--cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEE
Q psy8748 1754 MDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT--TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSIS 1831 (2004)
Q Consensus 1754 ~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~--~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLa 1831 (2004)
|+++..||+++.. +.......|...+..+.|.++. .+++|+.||.|++||.+..+.......+|...|.++.
T Consensus 192 -d~tl~~~D~RT~~-----~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VR 265 (370)
T KOG1007|consen 192 -DSTLQFWDLRTMK-----KNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVR 265 (370)
T ss_pred -CCcEEEEEccchh-----hhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEE
Confidence 7899999998643 2233345677889999998765 4889999999999999987776677789999999999
Q ss_pred ECCC-CCEEEEEECCCeEEEEECCC-----------------------------CeEEEEEecCCCCeEEEEEeCCCC-E
Q psy8748 1832 LSPD-GQYFVTGSVDKSCKLWDFRE-----------------------------KKCVQTFFGHEADVNSVCFHPSGL-A 1880 (2004)
Q Consensus 1832 fSPd-g~~LaSGS~DGsIrIWDlrs-----------------------------~k~I~tl~~h~s~ItsIafSPdg~-~ 1880 (2004)
|+|. .+++++|+.|..|.+|.... ...+.++..|++.|.+++|+.-.. .
T Consensus 266 fn~~hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWi 345 (370)
T KOG1007|consen 266 FNPEHDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWI 345 (370)
T ss_pred ecCccceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCee
Confidence 9994 56888999999999996421 113456778999999999998555 4
Q ss_pred EEEEECCCeEEEEEcc
Q psy8748 1881 FATGSEDKTARLFDIR 1896 (2004)
Q Consensus 1881 LaSgS~DGtIrIWDLr 1896 (2004)
|++-+.||++.|=.+.
T Consensus 346 FASLSYDGRviIs~V~ 361 (370)
T KOG1007|consen 346 FASLSYDGRVIISSVP 361 (370)
T ss_pred EEEeccCceEEeecCC
Confidence 7788999999886654
No 207
>KOG1445|consensus
Probab=99.40 E-value=3.6e-12 Score=154.97 Aligned_cols=243 Identities=18% Similarity=0.253 Sum_probs=174.4
Q ss_pred EecCCCEEEE--eecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe--CCCcEEEeecCCeEEEEECCCCce--
Q psy8748 1742 FAQSGNFVAC--GGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI--DDTTLLTGSGDMKIVTWNLETGQR-- 1815 (2004)
Q Consensus 1742 fSPdg~~LaS--GS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs--dd~~LlSgS~DGtI~IWDl~tg~~-- 1815 (2004)
|+.+..++++ .+..|.|-||+++............ .-....|+.+.|. ++.+++++++||.|++|.+..+..
T Consensus 587 fcan~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~--l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e 664 (1012)
T KOG1445|consen 587 FCANNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPG--LFNGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPE 664 (1012)
T ss_pred eeeccceEEEEecCCCceEEEEEcCCCCCCCcccccc--cccCceeeecccCCCChHHeeecccCceEEEEEeccCCCCc
Confidence 4444555544 4567999999998754332222111 1234567888887 677899999999999999876532
Q ss_pred ----eEEeeccccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeE
Q psy8748 1816 ----IHEVAQAHIGDVVSISLSP-DGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTA 1890 (2004)
Q Consensus 1816 ----i~~il~~h~~~ItsLafSP-dg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtI 1890 (2004)
...++..|...|+++.||| -.+.|++++.|-+|++||+++++....+.+|.+.|.+++|+|+|+.+++.+.||+|
T Consensus 665 ~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~ 744 (1012)
T KOG1445|consen 665 NEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTL 744 (1012)
T ss_pred ccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceE
Confidence 2345678999999999999 45688999999999999999999989999999999999999999999999999999
Q ss_pred EEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCC----eEEEEECCCC--eeeEEEccCCC-CeEEEEEcCC
Q psy8748 1891 RLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDN----NVHVWDLLKT--THNGVLSGHEN-RVTSISLSPN 1963 (2004)
Q Consensus 1891 rIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDG----sIrIWDL~tg--e~l~tL~gHs~-~VtsLaFSPD 1963 (2004)
++|+-+++.....-........-..+.|.-+|+++++.+.|. .|.+||..+- .++.+..-... .+.--.+.+|
T Consensus 745 rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~D 824 (1012)
T KOG1445|consen 745 RVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYD 824 (1012)
T ss_pred EEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhhccCCcceeeeecccCccccccccCC
Confidence 999998776543332222234445678888999998877664 5888987543 23322211000 1111123344
Q ss_pred C-CEEEEEECCCeEEEEECCCCeE
Q psy8748 1964 G-MALVTSSWDQFVKVWQESNTIV 1986 (2004)
Q Consensus 1964 g-~~LaSgS~DGtIrIWdlstg~l 1986 (2004)
. -++++|-.|..|.+|.+-....
T Consensus 825 s~~lfltGKGD~~v~~yEv~~esP 848 (1012)
T KOG1445|consen 825 SNVLFLTGKGDRFVNMYEVIYESP 848 (1012)
T ss_pred CceEEEecCCCceEEEEEecCCCc
Confidence 4 4577888899999999876543
No 208
>KOG0303|consensus
Probab=99.40 E-value=8.9e-12 Score=146.60 Aligned_cols=207 Identities=17% Similarity=0.266 Sum_probs=165.5
Q ss_pred EEEecCccceeeeEEe--CCCcEEEeecCCeEEEEECCCCcee------EEeeccccCCeEEEEECCC-CCEEEEEECCC
Q psy8748 1776 RELLGYEGFLSSCRFI--DDTTLLTGSGDMKIVTWNLETGQRI------HEVAQAHIGDVVSISLSPD-GQYFVTGSVDK 1846 (2004)
Q Consensus 1776 ~sl~gh~~~Vssvafs--dd~~LlSgS~DGtI~IWDl~tg~~i------~~il~~h~~~ItsLafSPd-g~~LaSGS~DG 1846 (2004)
....+|.+.+..+.|. ++..+++|+.|.+|.+|++..+... ...+.+|...|--++|||. .+.|++++.|.
T Consensus 75 P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn 154 (472)
T KOG0303|consen 75 PLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDN 154 (472)
T ss_pred CCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCc
Confidence 3456899999999998 5667999999999999998765432 2346799999999999994 56889999999
Q ss_pred eEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEE
Q psy8748 1847 SCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIF 1926 (2004)
Q Consensus 1847 sIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~La 1926 (2004)
.|.+|++.+++.+.++. |.+.|.++.|+.||.++++.+.|.+|+|||.++++.+..-..+. +..-..+.|-.+|.++-
T Consensus 155 ~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~he-G~k~~Raifl~~g~i~t 232 (472)
T KOG0303|consen 155 TVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHE-GAKPARAIFLASGKIFT 232 (472)
T ss_pred eEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeeccccc-CCCcceeEEeccCceee
Confidence 99999999999988886 99999999999999999999999999999999999988773322 23345566778888666
Q ss_pred EEe---CCCeEEEEECCCCeee---EEEccCCCCeEEEEEcCCCCEEEEEEC-CCeEEEEECCCCe
Q psy8748 1927 CGS---DDNNVHVWDLLKTTHN---GVLSGHENRVTSISLSPNGMALVTSSW-DQFVKVWQESNTI 1985 (2004)
Q Consensus 1927 SGS---sDGsIrIWDL~tge~l---~tL~gHs~~VtsLaFSPDg~~LaSgS~-DGtIrIWdlstg~ 1985 (2004)
+|. .+.++-+||-.+.+.. ..+. .+..|.---|.+|...++.+|. |+.||.|.+.+..
T Consensus 233 TGfsr~seRq~aLwdp~nl~eP~~~~elD-tSnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~ 297 (472)
T KOG0303|consen 233 TGFSRMSERQIALWDPNNLEEPIALQELD-TSNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP 297 (472)
T ss_pred eccccccccceeccCcccccCcceeEEec-cCCceEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence 654 3678999997654433 2333 3455666667888888877664 9999999998875
No 209
>KOG1240|consensus
Probab=99.40 E-value=2.8e-11 Score=156.94 Aligned_cols=265 Identities=15% Similarity=0.195 Sum_probs=191.0
Q ss_pred EECCCCceEEEeeCCCCceEEEEEecCC-CEEEEeecCCeEEEEEcCCCCCC-CcceEEEEEecCccceeeeEEe-CCCc
Q psy8748 1719 WDTWTGNKTQVIPLRSAWVMSVAFAQSG-NFVACGGMDNMCTVYDLNNRDST-GAAKVIRELLGYEGFLSSCRFI-DDTT 1795 (2004)
Q Consensus 1719 WDl~Tgk~l~ti~~Ht~~ItsLafSPdg-~~LaSGS~DGtIrVWDl~t~~~~-~~~k~i~sl~gh~~~Vssvafs-dd~~ 1795 (2004)
|+. .|..+..+..|...|..++.++.. .++++|+.||+|++|+....... ...+...++......+.++... .++.
T Consensus 1034 W~p-~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~ 1112 (1431)
T KOG1240|consen 1034 WNP-RGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQ 1112 (1431)
T ss_pred CCc-cceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCe
Confidence 763 677888888899888888887754 99999999999999999764433 3444445555566777777776 4566
Q ss_pred EEEeecCCeEEEEECCCCce--e-----EEeeccccCCeEEE-EECC-CCC-EEEEEECCCeEEEEECCCCeEEEEEe--
Q psy8748 1796 LLTGSGDMKIVTWNLETGQR--I-----HEVAQAHIGDVVSI-SLSP-DGQ-YFVTGSVDKSCKLWDFREKKCVQTFF-- 1863 (2004)
Q Consensus 1796 LlSgS~DGtI~IWDl~tg~~--i-----~~il~~h~~~ItsL-afSP-dg~-~LaSGS~DGsIrIWDlrs~k~I~tl~-- 1863 (2004)
+++++.||.|.+.+++.... . ........+.+.++ +|.. .+. .++.++.-+.|..||.+.......++
T Consensus 1113 ~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~ 1192 (1431)
T KOG1240|consen 1113 FAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQ 1192 (1431)
T ss_pred EEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcC
Confidence 89999999999999876211 1 11111223333333 3332 233 78888888999999998766544443
Q ss_pred cCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCC---CCEEEE-Ee-CCCeEEEEE
Q psy8748 1864 GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSS---GRYIFC-GS-DDNNVHVWD 1938 (2004)
Q Consensus 1864 ~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPd---G~~LaS-GS-sDGsIrIWD 1938 (2004)
...+.|++++.+|.+++++.|+..|.+.+||++-+..+..+..+.+ .++..+..+|- ....++ |+ ..+.|.+|+
T Consensus 1193 ~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~-~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn 1271 (1431)
T KOG1240|consen 1193 LRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPAR-APIRHVWLCPTYPQESVSVSAGSSSNNEVSTWN 1271 (1431)
T ss_pred ccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCccc-CCcceEEeeccCCCCceEEEecccCCCceeeee
Confidence 3467899999999999999999999999999998888888765554 77777777763 244444 44 478899999
Q ss_pred CCCCeeeEEEccC-C------------------CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCe
Q psy8748 1939 LLKTTHNGVLSGH-E------------------NRVTSISLSPNGMALVTSSWDQFVKVWQESNTI 1985 (2004)
Q Consensus 1939 L~tge~l~tL~gH-s------------------~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~ 1985 (2004)
+.+|.+...+... . -......+...+..+.+||.|+.|+.||.....
T Consensus 1272 ~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~ 1337 (1431)
T KOG1240|consen 1272 METGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPE 1337 (1431)
T ss_pred cccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcc
Confidence 9998777766432 1 112223444456789999999999999998764
No 210
>KOG0771|consensus
Probab=99.39 E-value=3.8e-12 Score=151.69 Aligned_cols=197 Identities=21% Similarity=0.312 Sum_probs=153.1
Q ss_pred eEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEE
Q psy8748 1696 NSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVI 1775 (2004)
Q Consensus 1696 tsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i 1775 (2004)
.+++|+.+|..+++|+.||++|||++.+...+.....|.+.|.++.|+|||++|++.+.| ..+||+.+++.......
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t-- 224 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKT-- 224 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcC--
Confidence 689999999999999999999999998888888888899999999999999999999999 79999998763221111
Q ss_pred EEEecCccceeeeEEeCCC-----cEEEe-ecCCeEEEEECCCCce----eEEeeccccCCeEEEEECCCCCEEEEEECC
Q psy8748 1776 RELLGYEGFLSSCRFIDDT-----TLLTG-SGDMKIVTWNLETGQR----IHEVAQAHIGDVVSISLSPDGQYFVTGSVD 1845 (2004)
Q Consensus 1776 ~sl~gh~~~Vssvafsdd~-----~LlSg-S~DGtI~IWDl~tg~~----i~~il~~h~~~ItsLafSPdg~~LaSGS~D 1845 (2004)
-.........|.|..++ ++++. ...+.|..||+..... ...........|++++++.+|++++.|+.|
T Consensus 225 --~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~d 302 (398)
T KOG0771|consen 225 --PFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMD 302 (398)
T ss_pred --CcccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccC
Confidence 12334456667777544 33332 2345666666543222 111111233479999999999999999999
Q ss_pred CeEEEEECCCCeEEEEE-ecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccC
Q psy8748 1846 KSCKLWDFREKKCVQTF-FGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRA 1897 (2004)
Q Consensus 1846 GsIrIWDlrs~k~I~tl-~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrt 1897 (2004)
|.|-|++..+.+.++.. +.|...|+.+.|+|+.+++++.+.|....+..+.-
T Consensus 303 GsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 303 GSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKLAV 355 (398)
T ss_pred CcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEEee
Confidence 99999999888776655 47889999999999999999999999888887754
No 211
>KOG1310|consensus
Probab=99.37 E-value=5.2e-12 Score=152.40 Aligned_cols=221 Identities=24% Similarity=0.390 Sum_probs=163.9
Q ss_pred ccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe-eCCCCceEEEEEec--CCCEEEEeecCCeEEE
Q psy8748 1684 PKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVI-PLRSAWVMSVAFAQ--SGNFVACGGMDNMCTV 1760 (2004)
Q Consensus 1684 pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti-~~Ht~~ItsLafSP--dg~~LaSGS~DGtIrV 1760 (2004)
...+|.||++.|+|+.|+.||.+|++|++|-.+.|||.-..+.++.+ .+|.+.|.++.|-| +.+.+++|..|..|++
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~l 121 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKL 121 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence 45689999999999999999999999999999999999988888877 57999999999998 4568999999999999
Q ss_pred EEcCCCCC----CCcceEEEEEecCccceeeeEEeCC--CcEEEeecCCeEEEEECCCCceeEEe---------eccccC
Q psy8748 1761 YDLNNRDS----TGAAKVIRELLGYEGFLSSCRFIDD--TTLLTGSGDMKIVTWNLETGQRIHEV---------AQAHIG 1825 (2004)
Q Consensus 1761 WDl~t~~~----~~~~k~i~sl~gh~~~Vssvafsdd--~~LlSgS~DGtI~IWDl~tg~~i~~i---------l~~h~~ 1825 (2004)
+|++..+. .+..........|...|..++..++ +.+.+++.||+|+-+|++.......- .....-
T Consensus 122 fdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~li 201 (758)
T KOG1310|consen 122 FDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLI 201 (758)
T ss_pred EecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhh
Confidence 99985321 1123334455667777777776654 46999999999999999874322111 111123
Q ss_pred CeEEEEECCC-CCEEEEEECCCeEEEEECCC--------Ce----------EEEEEe-cCC--------C---CeEEEEE
Q psy8748 1826 DVVSISLSPD-GQYFVTGSVDKSCKLWDFRE--------KK----------CVQTFF-GHE--------A---DVNSVCF 1874 (2004)
Q Consensus 1826 ~ItsLafSPd-g~~LaSGS~DGsIrIWDlrs--------~k----------~I~tl~-~h~--------s---~ItsIaf 1874 (2004)
...|+.++|. ..+|++|+.|-..++||.+. +. ++..+. +|- . .++-+.|
T Consensus 202 elk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtf 281 (758)
T KOG1310|consen 202 ELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTF 281 (758)
T ss_pred eeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEEE
Confidence 4678999994 56899999999999999541 11 122221 111 1 2456789
Q ss_pred eCCCCEEEEEECCCeEEEEEccCCceeEEE
Q psy8748 1875 HPSGLAFATGSEDKTARLFDIRADQQIATY 1904 (2004)
Q Consensus 1875 SPdg~~LaSgS~DGtIrIWDLrtgk~i~t~ 1904 (2004)
+|+|.-+++.-....|+++|+..++....+
T Consensus 282 npNGtElLvs~~gEhVYlfdvn~~~~~~~y 311 (758)
T KOG1310|consen 282 NPNGTELLVSWGGEHVYLFDVNEDKSPTPY 311 (758)
T ss_pred CCCCcEEEEeeCCeEEEEEeecCCCCceee
Confidence 999988777666778999999876654433
No 212
>KOG2321|consensus
Probab=99.36 E-value=7e-11 Score=144.02 Aligned_cols=281 Identities=14% Similarity=0.192 Sum_probs=206.0
Q ss_pred ccccceeEEEEeCCCCEE-EEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCC
Q psy8748 1690 GHINKVNSVHYSGDSRHC-VSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDS 1768 (2004)
Q Consensus 1690 GHt~~VtsLaFSPDG~~L-ASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~ 1768 (2004)
+|...-+.|..+|||+|+ |||..--.|++||+..-.....-......|.-.-.+.|-...+.-..|..|.+..--..
T Consensus 49 e~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanLSLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~G~-- 126 (703)
T KOG2321|consen 49 EMPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANLSLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKYGR-- 126 (703)
T ss_pred CCccccceeEecCCCcEEEEecccCCceEEEEcccceeeeeecccccceeEEEeccchhhheEeecCceeeehhhcCe--
Confidence 366778899999999985 56777889999998776555443333445555555666666666667777765432110
Q ss_pred CCcceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCe
Q psy8748 1769 TGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKS 1847 (2004)
Q Consensus 1769 ~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGs 1847 (2004)
.... ........++++ ...-+++++....|+-++++.|..+..+ ....+.+.++..++...+|++|+.+|.
T Consensus 127 -----hy~~--RIP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~-~~~~~~lN~v~in~~hgLla~Gt~~g~ 198 (703)
T KOG2321|consen 127 -----HYRT--RIPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPF-ETDSGELNVVSINEEHGLLACGTEDGV 198 (703)
T ss_pred -----eeee--ecCcCCccccccCCCccEEEeecCcceEEEEcccccccccc-ccccccceeeeecCccceEEecccCce
Confidence 0000 011222334444 3345777778888999999999877443 445578999999999999999999999
Q ss_pred EEEEECCCCeEEEEEec------CCC-----CeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEE
Q psy8748 1848 CKLWDFREKKCVQTFFG------HEA-----DVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSC 1916 (2004)
Q Consensus 1848 IrIWDlrs~k~I~tl~~------h~s-----~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsL 1916 (2004)
|..||.+....+..+.. |.+ .|+++.|+.+|-.+++|+.+|.|.|||+++.+++... .+....+|..+
T Consensus 199 VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~k-dh~~e~pi~~l 277 (703)
T KOG2321|consen 199 VEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVK-DHGYELPIKKL 277 (703)
T ss_pred EEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeec-ccCCccceeee
Confidence 99999998776655532 222 4999999999999999999999999999988876554 34455678899
Q ss_pred EEcCC--CCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q psy8748 1917 AVSSS--GRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESN 1983 (2004)
Q Consensus 1917 afSPd--G~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlst 1983 (2004)
.|.+. ++.+++. +...++|||-.+|+....+.. ...+..+++-|++.+++++-.++.+..|=+..
T Consensus 278 ~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEp-t~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~ 344 (703)
T KOG2321|consen 278 DWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEP-TSDLNDFCFVPGSGMFFTANESSKMHTYYIPS 344 (703)
T ss_pred cccccCCCceEEec-chHHhhhcccccCCceeeccc-cCCcCceeeecCCceEEEecCCCcceeEEccc
Confidence 99775 3445543 456799999999999888864 44599999999999999999988887776553
No 213
>KOG1334|consensus
Probab=99.35 E-value=6.8e-12 Score=150.67 Aligned_cols=292 Identities=17% Similarity=0.176 Sum_probs=211.7
Q ss_pred CCCCCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCC
Q psy8748 1551 PEPCKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPT 1630 (2004)
Q Consensus 1551 ~e~Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spd 1630 (2004)
..+|++.|+.|.|...|..|+| |++|..|.+|||.. +.....+
T Consensus 138 L~~H~GcVntV~FN~~Gd~l~S-gSDD~~vv~WdW~~-------------~~~~l~f----------------------- 180 (559)
T KOG1334|consen 138 LNKHKGCVNTVHFNQRGDVLAS-GSDDLQVVVWDWVS-------------GSPKLSF----------------------- 180 (559)
T ss_pred ccCCCCccceeeecccCceeec-cCccceEEeehhhc-------------cCccccc-----------------------
Confidence 4569999999999999999999 99999999999988 2211111
Q ss_pred CcchhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeC--CCCEEE
Q psy8748 1631 SSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSG--DSRHCV 1708 (2004)
Q Consensus 1631 gSidi~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSP--DG~~LA 1708 (2004)
..||...|..-.|-| +.+-++
T Consensus 181 ---------------------------------------------------------~SGH~~NvfQaKFiP~s~d~ti~ 203 (559)
T KOG1334|consen 181 ---------------------------------------------------------ESGHCNNVFQAKFIPFSGDRTIV 203 (559)
T ss_pred ---------------------------------------------------------ccccccchhhhhccCCCCCcCce
Confidence 124555555555655 345689
Q ss_pred EEeCCCeEEEEECCC-Cce--EEEeeCCCCceEEEEEecCC-CEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCcc-
Q psy8748 1709 SGSLDGKLIIWDTWT-GNK--TQVIPLRSAWVMSVAFAQSG-NFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEG- 1783 (2004)
Q Consensus 1709 SGS~DGtIrVWDl~T-gk~--l~ti~~Ht~~ItsLafSPdg-~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~- 1783 (2004)
+++.||.+++=.+.. +.. ...+..|.++|..++.-|+. .-|.+++.|+.+.-+|+.......... ....+..
T Consensus 204 ~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~---cr~~~~~~ 280 (559)
T KOG1334|consen 204 TSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFV---CREADEKE 280 (559)
T ss_pred eccccCceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceee---eeccCCcc
Confidence 999999999876543 322 33456799999999999965 578899999999999987654322222 2222222
Q ss_pred --ceeeeEEeC--CCcEEEeecCCeEEEEECCCCcee------EEe-----eccccCCeEEEEECCCCCEEEEEECCCeE
Q psy8748 1784 --FLSSCRFID--DTTLLTGSGDMKIVTWNLETGQRI------HEV-----AQAHIGDVVSISLSPDGQYFVTGSVDKSC 1848 (2004)
Q Consensus 1784 --~Vssvafsd--d~~LlSgS~DGtI~IWDl~tg~~i------~~i-----l~~h~~~ItsLafSPdg~~LaSGS~DGsI 1848 (2004)
....++..+ ...+++|+.|..+++||.+.-... .++ .....-.|+|++|+.++.-+.++..|-.|
T Consensus 281 ~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~I 360 (559)
T KOG1334|consen 281 RVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDEDI 360 (559)
T ss_pred ceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccce
Confidence 334444443 346999999999999998643221 122 12334569999999888888888889899
Q ss_pred EEEECC--CC----------eEEEE-EecCCC--CeEEEEE-eCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCC
Q psy8748 1849 KLWDFR--EK----------KCVQT-FFGHEA--DVNSVCF-HPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSG 1912 (2004)
Q Consensus 1849 rIWDlr--s~----------k~I~t-l~~h~s--~ItsIaf-SPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ 1912 (2004)
+++.-. .+ ..+.. +++|.. .|.++-| -|...++++|+.-|.|.||+-.+++.+.......+ -
T Consensus 361 YLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~--V 438 (559)
T KOG1334|consen 361 YLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRH--V 438 (559)
T ss_pred EEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccc--e
Confidence 999533 12 22233 677754 4667765 57888999999999999999998888776654443 7
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy8748 1913 FTSCAVSSSGRYIFCGSDDNNVHVWDLLK 1941 (2004)
Q Consensus 1913 ItsLafSPdG~~LaSGSsDGsIrIWDL~t 1941 (2004)
|.|+.-+|--..||+.+-|..|+||--.+
T Consensus 439 VNCLEpHP~~PvLAsSGid~DVKIWTP~~ 467 (559)
T KOG1334|consen 439 VNCLEPHPHLPVLASSGIDHDVKIWTPLT 467 (559)
T ss_pred EeccCCCCCCchhhccCCccceeeecCCc
Confidence 89999999999999999999999998644
No 214
>KOG2111|consensus
Probab=99.34 E-value=6.6e-10 Score=128.89 Aligned_cols=235 Identities=17% Similarity=0.275 Sum_probs=162.7
Q ss_pred eeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCc--eEEEEEecCCCEEEE-eecC------CeEEEEEcCC
Q psy8748 1695 VNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAW--VMSVAFAQSGNFVAC-GGMD------NMCTVYDLNN 1765 (2004)
Q Consensus 1695 VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~--ItsLafSPdg~~LaS-GS~D------GtIrVWDl~t 1765 (2004)
..+++|+.|...+++|.++| .+||+.+--+....-..+.+. +.-|-| ..++++. ||.+ ..+.|||=..
T Consensus 8 ~lsvs~NQD~ScFava~~~G-friyn~~P~ke~~~r~~~~~G~~~veMLf--R~N~laLVGGg~~pky~pNkviIWDD~k 84 (346)
T KOG2111|consen 8 TLSVSFNQDHSCFAVATDTG-FRIYNCDPFKESASRQFIDGGFKIVEMLF--RSNYLALVGGGSRPKYPPNKVIIWDDLK 84 (346)
T ss_pred eeEEEEccCCceEEEEecCc-eEEEecCchhhhhhhccccCchhhhhHhh--hhceEEEecCCCCCCCCCceEEEEeccc
Confidence 34599999999999998776 899987654332222222222 222222 2444443 3332 4799999321
Q ss_pred CCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCC-ceeEEeec-cccCCeEEEEECCCCCEEEE-E
Q psy8748 1766 RDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETG-QRIHEVAQ-AHIGDVVSISLSPDGQYFVT-G 1842 (2004)
Q Consensus 1766 ~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg-~~i~~il~-~h~~~ItsLafSPdg~~LaS-G 1842 (2004)
...+.+ ......|..+....+..++ --.+.|++|...+. +.++.+.. .......+++-+.+..+|+. |
T Consensus 85 ------~~~i~e-l~f~~~I~~V~l~r~riVv--vl~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg 155 (346)
T KOG2111|consen 85 ------ERCIIE-LSFNSEIKAVKLRRDRIVV--VLENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPG 155 (346)
T ss_pred ------CcEEEE-EEeccceeeEEEcCCeEEE--EecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCC
Confidence 122222 2345677777776554333 34678999998743 44433321 11333444443334444444 4
Q ss_pred ECCCeEEEEECCCCeE--EEEEecCCCCeEEEEEeCCCCEEEEEECCCe-EEEEEccCCceeEEEcCCCCCCCeEEEEEc
Q psy8748 1843 SVDKSCKLWDFREKKC--VQTFFGHEADVNSVCFHPSGLAFATGSEDKT-ARLFDIRADQQIATYLPPNKNSGFTSCAVS 1919 (2004)
Q Consensus 1843 S~DGsIrIWDlrs~k~--I~tl~~h~s~ItsIafSPdg~~LaSgS~DGt-IrIWDLrtgk~i~t~~~~~~~s~ItsLafS 1919 (2004)
-.-|.|+|-|+...+. ...+.+|...|.|++.+-+|..++++|..|+ |||||..+|..+..+........|.+++|+
T Consensus 156 ~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFS 235 (346)
T KOG2111|consen 156 FKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFS 235 (346)
T ss_pred CccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeC
Confidence 4568999999986654 4678899999999999999999999999998 899999999999999777777889999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCC
Q psy8748 1920 SSGRYIFCGSDDNNVHVWDLLK 1941 (2004)
Q Consensus 1920 PdG~~LaSGSsDGsIrIWDL~t 1941 (2004)
|++.+|+++++.|+++||.++.
T Consensus 236 p~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 236 PNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred CCccEEEEEcCCCeEEEEEeec
Confidence 9999999999999999998865
No 215
>KOG3881|consensus
Probab=99.33 E-value=6.7e-11 Score=139.84 Aligned_cols=250 Identities=16% Similarity=0.258 Sum_probs=183.2
Q ss_pred CCceEEEEEecCCC--EEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECC
Q psy8748 1734 SAWVMSVAFAQSGN--FVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLE 1811 (2004)
Q Consensus 1734 t~~ItsLafSPdg~--~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~ 1811 (2004)
...|..++|.-+++ .+...+.+..+..+.+...................+.|..+... ++.+++|..+|.+.+|..+
T Consensus 55 ~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~-dg~Litc~~sG~l~~~~~k 133 (412)
T KOG3881|consen 55 LDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA-DGTLITCVSSGNLQVRHDK 133 (412)
T ss_pred hhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc-CCEEEEEecCCcEEEEecc
Confidence 45677888876554 44444466667777766544333322233444455556655554 4468888999999999988
Q ss_pred CCcee--EEeeccccCCeEEEEECCCCC-EEEEEECC--CeEEEEECCCCeEEEEEecC---------CCCeEEEEEeCC
Q psy8748 1812 TGQRI--HEVAQAHIGDVVSISLSPDGQ-YFVTGSVD--KSCKLWDFREKKCVQTFFGH---------EADVNSVCFHPS 1877 (2004)
Q Consensus 1812 tg~~i--~~il~~h~~~ItsLafSPdg~-~LaSGS~D--GsIrIWDlrs~k~I~tl~~h---------~s~ItsIafSPd 1877 (2004)
.+..- ..........+..+.-++... .+++||.. ..+.|||+.+.+.+..-+.- .-.++++.|-+.
T Consensus 134 ~~d~hss~l~~la~g~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g 213 (412)
T KOG3881|consen 134 SGDLHSSKLIKLATGPGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEG 213 (412)
T ss_pred CCccccccceeeecCCceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCC
Confidence 54311 011112235566666666444 55668888 78999999988655544321 124668889887
Q ss_pred --CCEEEEEECCCeEEEEEccCCce-eEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEE-EccCCC
Q psy8748 1878 --GLAFATGSEDKTARLFDIRADQQ-IATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGV-LSGHEN 1953 (2004)
Q Consensus 1878 --g~~LaSgS~DGtIrIWDLrtgk~-i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~t-L~gHs~ 1953 (2004)
...|++++.-+.+++||.+.++. +..+. -...+++++...|+|++|++|..-|.+..||++.++.... +.+-.+
T Consensus 214 ~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd--~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tG 291 (412)
T KOG3881|consen 214 SPNYKFATITRYHQVRLYDTRHQRRPVAQFD--FLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITG 291 (412)
T ss_pred CCCceEEEEecceeEEEecCcccCcceeEec--cccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccC
Confidence 78899999999999999987654 44443 3357899999999999999999999999999999998877 889999
Q ss_pred CeEEEEEcCCCCEEEEEECCCeEEEEECCCCeE
Q psy8748 1954 RVTSISLSPNGMALVTSSWDQFVKVWQESNTIV 1986 (2004)
Q Consensus 1954 ~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l 1986 (2004)
.|+++..+|.++++++||-|+.|||+|+.+.++
T Consensus 292 sirsih~hp~~~~las~GLDRyvRIhD~ktrkl 324 (412)
T KOG3881|consen 292 SIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKL 324 (412)
T ss_pred CcceEEEcCCCceEEeeccceeEEEeecccchh
Confidence 999999999999999999999999999998643
No 216
>KOG2111|consensus
Probab=99.32 E-value=2.3e-10 Score=132.62 Aligned_cols=239 Identities=17% Similarity=0.241 Sum_probs=167.0
Q ss_pred ceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecC------CeEEEEE
Q psy8748 1736 WVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGD------MKIVTWN 1809 (2004)
Q Consensus 1736 ~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~D------GtI~IWD 1809 (2004)
...+++|+.|...+++|..+| .++|+.+.-+.. ..+......-.+..+-|-.+-..++|+.+ ..|.|||
T Consensus 7 ~~lsvs~NQD~ScFava~~~G-friyn~~P~ke~----~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWD 81 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDTG-FRIYNCDPFKES----ASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWD 81 (346)
T ss_pred ceeEEEEccCCceEEEEecCc-eEEEecCchhhh----hhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEe
Confidence 345589999999999999888 899998742210 11111111122222222222234455544 5799999
Q ss_pred CCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECC-CCeEEEEEecCC--CCeEEEEEeCCCCEEEE-EE
Q psy8748 1810 LETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFR-EKKCVQTFFGHE--ADVNSVCFHPSGLAFAT-GS 1885 (2004)
Q Consensus 1810 l~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlr-s~k~I~tl~~h~--s~ItsIafSPdg~~LaS-gS 1885 (2004)
-....++.+. ....+|.++.+.++ .+++.- .+.|++|... +.+.+..+.... ....+++-..+..+|+. |-
T Consensus 82 D~k~~~i~el--~f~~~I~~V~l~r~--riVvvl-~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~ 156 (346)
T KOG2111|consen 82 DLKERCIIEL--SFNSEIKAVKLRRD--RIVVVL-ENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGF 156 (346)
T ss_pred cccCcEEEEE--EeccceeeEEEcCC--eEEEEe-cCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCC
Confidence 7666666555 56788999999854 455554 6789999987 445555554322 22333333334444554 34
Q ss_pred CCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCe-EEEEECCCCeeeEEEcc--CCCCeEEEEEcC
Q psy8748 1886 EDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNN-VHVWDLLKTTHNGVLSG--HENRVTSISLSP 1962 (2004)
Q Consensus 1886 ~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGs-IrIWDL~tge~l~tL~g--Hs~~VtsLaFSP 1962 (2004)
.-|.|+|-|+...+.-.......|...|.|++.+-+|..+|+++..|+ |||||..+|+.+..++- ....|.+++|+|
T Consensus 157 k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp 236 (346)
T KOG2111|consen 157 KTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSP 236 (346)
T ss_pred ccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCC
Confidence 568999999986655222333678899999999999999999999998 89999999999998853 345799999999
Q ss_pred CCCEEEEEECCCeEEEEECCCC
Q psy8748 1963 NGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1963 Dg~~LaSgS~DGtIrIWdlstg 1984 (2004)
++.+|+++|+-|+|+||.+...
T Consensus 237 ~~s~LavsSdKgTlHiF~l~~~ 258 (346)
T KOG2111|consen 237 NSSWLAVSSDKGTLHIFSLRDT 258 (346)
T ss_pred CccEEEEEcCCCeEEEEEeecC
Confidence 9999999999999999998764
No 217
>KOG2139|consensus
Probab=99.32 E-value=3.9e-10 Score=131.97 Aligned_cols=285 Identities=18% Similarity=0.240 Sum_probs=190.0
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEee-CCCCceEEEEEecCC-CEEEEeecCCeEEEEEcCCCCCCC
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIP-LRSAWVMSVAFAQSG-NFVACGGMDNMCTVYDLNNRDSTG 1770 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~-~Ht~~ItsLafSPdg-~~LaSGS~DGtIrVWDl~t~~~~~ 1770 (2004)
-.+..++|++.-..+|++..|-.|++||-.+ +....++ .....|+|++|-|.+ ..|++|+..| |.+|..+......
T Consensus 99 ~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~g-IciW~~s~tln~~ 176 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNAN 176 (445)
T ss_pred cceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecce-eEEEEcCcccccc
Confidence 4677899998777789999999999999766 4444443 345679999999964 5677777665 9999876432111
Q ss_pred c--------ceEEEEEecCccceeeeEEeCCCc-EEEee-cCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEE
Q psy8748 1771 A--------AKVIRELLGYEGFLSSCRFIDDTT-LLTGS-GDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFV 1840 (2004)
Q Consensus 1771 ~--------~k~i~sl~gh~~~Vssvafsdd~~-LlSgS-~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~La 1840 (2004)
. ...+....+| ..|+++.|.+++. +++++ .|..|.+||.+++..+.-. ....+.++-+.|+|||.+|+
T Consensus 177 r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~-~~glgg~slLkwSPdgd~lf 254 (445)
T KOG2139|consen 177 RNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLI-PKGLGGFSLLKWSPDGDVLF 254 (445)
T ss_pred cccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccccc-ccCCCceeeEEEcCCCCEEE
Confidence 1 0011122333 6889999986654 55554 5688999999999877433 34557789999999999999
Q ss_pred EEECCCeEEEEECC-CCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEc--------------
Q psy8748 1841 TGSVDKSCKLWDFR-EKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYL-------------- 1905 (2004)
Q Consensus 1841 SGS~DGsIrIWDlr-s~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~-------------- 1905 (2004)
+++-|+..++|... +....+-. ...+.|...+|+|+|+++...+. |.-++|.+.-......+.
T Consensus 255 aAt~davfrlw~e~q~wt~erw~-lgsgrvqtacWspcGsfLLf~~s-gsp~lysl~f~~~~~~~~~~~~~k~~lliaDL 332 (445)
T KOG2139|consen 255 AATCDAVFRLWQENQSWTKERWI-LGSGRVQTACWSPCGSFLLFACS-GSPRLYSLTFDGEDSVFLRPQSIKRVLLIADL 332 (445)
T ss_pred Eecccceeeeehhcccceeccee-ccCCceeeeeecCCCCEEEEEEc-CCceEEEEeecCCCccccCcccceeeeeeccc
Confidence 99999999999544 33333333 33458999999999998665542 344555442111100000
Q ss_pred --------CCCCCCCeEEEEEcCCCCEEEEEeCCC--------eEEEEECCCCeeeEEE-cc--CCCCeEEEEEcC---C
Q psy8748 1906 --------PPNKNSGFTSCAVSSSGRYIFCGSDDN--------NVHVWDLLKTTHNGVL-SG--HENRVTSISLSP---N 1963 (2004)
Q Consensus 1906 --------~~~~~s~ItsLafSPdG~~LaSGSsDG--------sIrIWDL~tge~l~tL-~g--Hs~~VtsLaFSP---D 1963 (2004)
..-..+++.+++|+|.|.++++....+ .|.+||.+..-.+... -+ ....-..++|+| +
T Consensus 333 ~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~ 412 (445)
T KOG2139|consen 333 QEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLKNE 412 (445)
T ss_pred hhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceEEeeecccC
Confidence 001145688999999999999976644 3677887665444322 11 112245566665 6
Q ss_pred CCEEEEEECCCeEEEEECCC
Q psy8748 1964 GMALVTSSWDQFVKVWQESN 1983 (2004)
Q Consensus 1964 g~~LaSgS~DGtIrIWdlst 1983 (2004)
|.+|..+=..|.+.-|.+.-
T Consensus 413 g~lLsiaWsTGriq~ypl~f 432 (445)
T KOG2139|consen 413 GRLLSIAWSTGRIQRYPLTF 432 (445)
T ss_pred CcEEEEEeccCceEeeeeEE
Confidence 77777777788888887653
No 218
>KOG1523|consensus
Probab=99.30 E-value=2.2e-10 Score=132.66 Aligned_cols=261 Identities=15% Similarity=0.151 Sum_probs=194.1
Q ss_pred EeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCC-CcEEEeecCCeEEE
Q psy8748 1729 VIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD-TTLLTGSGDMKIVT 1807 (2004)
Q Consensus 1729 ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd-~~LlSgS~DGtI~I 1807 (2004)
.+..-..+|+|.+|++|+..++++.....|.||.....+ ..+...++..|...++++.|.+. +++++++.|..-++
T Consensus 5 ~~~~~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~---~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayV 81 (361)
T KOG1523|consen 5 VFHRLLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGAD---LWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYV 81 (361)
T ss_pred EeeeccCceeeeeecCCCceEEeccCCceEEEEEecCCC---CceeceehhhhCcceeEEeecCCCCceeEccCCCCccc
Confidence 344456789999999999999999999999999987653 46778889999999999999965 58999999999999
Q ss_pred EECC-CCceeE-EeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEE----EEEecCCCCeEEEEEeCCCCEE
Q psy8748 1808 WNLE-TGQRIH-EVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCV----QTFFGHEADVNSVCFHPSGLAF 1881 (2004)
Q Consensus 1808 WDl~-tg~~i~-~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I----~tl~~h~s~ItsIafSPdg~~L 1881 (2004)
|... .++-.. -.+..+....+++.|+|.++.|++|+....|.||-++...-- ..-+.+...|.+++|+|++-.+
T Consensus 82 w~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLl 161 (361)
T KOG1523|consen 82 WTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLL 161 (361)
T ss_pred cccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCccee
Confidence 9984 433222 224567889999999999999999999999999987654321 1223567889999999999999
Q ss_pred EEEECCCeEEEEEccC------------------CceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy8748 1882 ATGSEDKTARLFDIRA------------------DQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTT 1943 (2004)
Q Consensus 1882 aSgS~DGtIrIWDLrt------------------gk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge 1943 (2004)
++|+.|++.++|..-- |..+..+ ....+.+..+.|+|+|..|+-.+.|+.+.+-|.....
T Consensus 162 aaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E~--~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~ 239 (361)
T KOG1523|consen 162 AAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSEA--SSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPS 239 (361)
T ss_pred cccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHhh--ccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCc
Confidence 9999999999997421 1112222 1345779999999999999999999999999986654
Q ss_pred -eeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEEeecC
Q psy8748 1944 -HNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNL 1995 (2004)
Q Consensus 1944 -~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik~~~~ 1995 (2004)
.+..+....-+..++.|-.+.. ++.+|.|..=.+|.......|...+..+.
T Consensus 240 ~~v~~~~~~~lP~ls~~~ise~~-vv~ag~~c~P~lf~~~~~~~l~~~~~ld~ 291 (361)
T KOG1523|consen 240 ERVQSVATAQLPLLSVSWISENS-VVAAGYDCGPVLFVTDEEGGLSFARRLDA 291 (361)
T ss_pred hhccchhhccCCceeeEeecCCc-eeecCCCCCceEEEeccccceeeehhcCC
Confidence 3444443347778888865543 55555564333444333224555444443
No 219
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.29 E-value=1e-10 Score=147.67 Aligned_cols=223 Identities=15% Similarity=0.119 Sum_probs=151.7
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCC---CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEee-cCCeEEE
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLD---GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGG-MDNMCTV 1760 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~D---GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS-~DGtIrV 1760 (2004)
.+.+..|...|.+.+|||||+.|+.++.+ ..|++||+.+++.... ....+....++|+|||+.|+.++ .+|.+.+
T Consensus 196 ~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l-~~~~g~~~~~~wSPDG~~La~~~~~~g~~~I 274 (429)
T PRK01742 196 QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVV-ASFRGHNGAPAFSPDGSRLAFASSKDGVLNI 274 (429)
T ss_pred ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEE-ecCCCccCceeECCCCCEEEEEEecCCcEEE
Confidence 45677888899999999999999987654 4699999988764322 21222344689999999888764 6787776
Q ss_pred EEcCCCCCCCcceEEEEEecCccceeeeEEeCCCc-EEE-eecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCE
Q psy8748 1761 YDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTT-LLT-GSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQY 1838 (2004)
Q Consensus 1761 WDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~-LlS-gS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~ 1838 (2004)
|.++... .....+..+...+....|++++. ++. +..+|...+|+++......... .+.+ .+..|+|+|++
T Consensus 275 y~~d~~~-----~~~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ 346 (429)
T PRK01742 275 YVMGANG-----GTPSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKT 346 (429)
T ss_pred EEEECCC-----CCeEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCE
Confidence 6553211 11234455566677888987664 444 4456777888765322211222 3333 45789999999
Q ss_pred EEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEcc--CCceeEEEcCCCCCCCeEEE
Q psy8748 1839 FVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIR--ADQQIATYLPPNKNSGFTSC 1916 (2004)
Q Consensus 1839 LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLr--tgk~i~t~~~~~~~s~ItsL 1916 (2004)
++.++.++ +.+||+.+++....... .....+.|+|+|+++++++.+|.+.+|++. +++....+. .+.+.+...
T Consensus 347 ia~~~~~~-i~~~Dl~~g~~~~lt~~--~~~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~--~~~g~~~~p 421 (429)
T PRK01742 347 LVMINGDN-VVKQDLTSGSTEVLSST--FLDESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLP--GSDGQVKFP 421 (429)
T ss_pred EEEEcCCC-EEEEECCCCCeEEecCC--CCCCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEcc--CCCCCCCCc
Confidence 98888765 56699988865432222 234567899999999999999988888763 466666663 444567788
Q ss_pred EEcCC
Q psy8748 1917 AVSSS 1921 (2004)
Q Consensus 1917 afSPd 1921 (2004)
+|+|-
T Consensus 422 ~wsp~ 426 (429)
T PRK01742 422 AWSPY 426 (429)
T ss_pred ccCCC
Confidence 89874
No 220
>KOG1272|consensus
Probab=99.29 E-value=1e-11 Score=148.48 Aligned_cols=271 Identities=20% Similarity=0.274 Sum_probs=209.1
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCc
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGA 1771 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~ 1771 (2004)
..+-..+.++.+|++++.||..|.|..+|+.+++....+... ..|.++.|-.+.++++++- ...+.|||-..
T Consensus 129 eFGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v~-Etv~Dv~~LHneq~~AVAQ-K~y~yvYD~~G------ 200 (545)
T KOG1272|consen 129 EFGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINVM-ETVRDVTFLHNEQFFAVAQ-KKYVYVYDNNG------ 200 (545)
T ss_pred ccCCeeeeecCCccEEEecCCccceeeeecccceeeeeeehh-hhhhhhhhhcchHHHHhhh-hceEEEecCCC------
Confidence 456678999999999999999999999999999998888754 4589999998888888764 56789998643
Q ss_pred ceEEEEEecCccceeeeEEeCCCc-EEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEE
Q psy8748 1772 AKVIRELLGYEGFLSSCRFIDDTT-LLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKL 1850 (2004)
Q Consensus 1772 ~k~i~sl~gh~~~Vssvafsdd~~-LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrI 1850 (2004)
..+..+. ....+..+.|.+-.+ +++++..|.+..-|+.+|+.+..+ ....+.+..++-+|-+..+-+|...|+|.+
T Consensus 201 -tElHClk-~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~-~t~~G~~~vm~qNP~NaVih~GhsnGtVSl 277 (545)
T KOG1272|consen 201 -TELHCLK-RHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASI-RTGAGRTDVMKQNPYNAVIHLGHSNGTVSL 277 (545)
T ss_pred -cEEeehh-hcCchhhhcccchhheeeecccCCceEEEeechhhhhHHH-HccCCccchhhcCCccceEEEcCCCceEEe
Confidence 2222222 234566777887776 556777899999999999988554 455678888999998889999999999999
Q ss_pred EECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeC
Q psy8748 1851 WDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSD 1930 (2004)
Q Consensus 1851 WDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSs 1930 (2004)
|.....+++..+..|.++|.+|++.++|.|+++.+.|..++|||++....+.++..+ .+...+++|..| .||. +.
T Consensus 278 WSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp---~~a~~ls~Sqkg-lLA~-~~ 352 (545)
T KOG1272|consen 278 WSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTP---HPASNLSLSQKG-LLAL-SY 352 (545)
T ss_pred cCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecC---CCcccccccccc-ceee-ec
Confidence 999999999999999999999999999999999999999999999998877776442 345677887655 3444 34
Q ss_pred CCeEEEEE-CCCC--eeeEEEccC--CCCeEEEEEcCCCCEEEEEECCCeEEE
Q psy8748 1931 DNNVHVWD-LLKT--THNGVLSGH--ENRVTSISLSPNGMALVTSSWDQFVKV 1978 (2004)
Q Consensus 1931 DGsIrIWD-L~tg--e~l~tL~gH--s~~VtsLaFSPDg~~LaSgS~DGtIrI 1978 (2004)
...|.||. ...+ .....+-.| .+.|.++.|+|-...|-.|-..|.-.+
T Consensus 353 G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~tsi 405 (545)
T KOG1272|consen 353 GDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGITSI 405 (545)
T ss_pred CCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeeccccCCceeE
Confidence 55699994 3221 122222222 458999999998777777665554433
No 221
>KOG1272|consensus
Probab=99.28 E-value=7e-12 Score=149.81 Aligned_cols=233 Identities=17% Similarity=0.282 Sum_probs=192.1
Q ss_pred CCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCC
Q psy8748 1734 SAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETG 1813 (2004)
Q Consensus 1734 t~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg 1813 (2004)
.-.-+.+.++.+|+.++.|+..|.+-.+|+.++. ..........|..+.|..+..+++......+++||-. |
T Consensus 129 eFGPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~-------L~~Ei~v~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~-G 200 (545)
T KOG1272|consen 129 EFGPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKK-------LHFEINVMETVRDVTFLHNEQFFAVAQKKYVYVYDNN-G 200 (545)
T ss_pred ccCCeeeeecCCccEEEecCCccceeeeecccce-------eeeeeehhhhhhhhhhhcchHHHHhhhhceEEEecCC-C
Confidence 3445778999999999999999999999997643 2222233556788888888888888899999999964 5
Q ss_pred ceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEE
Q psy8748 1814 QRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLF 1893 (2004)
Q Consensus 1814 ~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIW 1893 (2004)
..++.+ .....|..+.|-|-.-+|++++..|.++.-|+..|+.+..+....+.+..++-+|-+-.+-+|...|+|.+|
T Consensus 201 tElHCl--k~~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlW 278 (545)
T KOG1272|consen 201 TELHCL--KRHIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLW 278 (545)
T ss_pred cEEeeh--hhcCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEec
Confidence 555444 234678999999998899999999999999999999999998888999999999988899999999999999
Q ss_pred EccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECC
Q psy8748 1894 DIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWD 1973 (2004)
Q Consensus 1894 DLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~D 1973 (2004)
.......+.++. .|.++|.++++.++|+|+++.+.|..++|||++....+.++.. ..+...++||..| ++++|..
T Consensus 279 SP~skePLvKiL--cH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqkg--lLA~~~G 353 (545)
T KOG1272|consen 279 SPNSKEPLVKIL--CHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKG--LLALSYG 353 (545)
T ss_pred CCCCcchHHHHH--hcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCCcccccccccc--ceeeecC
Confidence 998888777663 5678999999999999999999999999999999887777664 5667888888666 3344445
Q ss_pred CeEEEEEC
Q psy8748 1974 QFVKVWQE 1981 (2004)
Q Consensus 1974 GtIrIWdl 1981 (2004)
..|.||.-
T Consensus 354 ~~v~iw~d 361 (545)
T KOG1272|consen 354 DHVQIWKD 361 (545)
T ss_pred Ceeeeehh
Confidence 57999963
No 222
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.27 E-value=1.6e-09 Score=137.02 Aligned_cols=234 Identities=14% Similarity=0.088 Sum_probs=160.0
Q ss_pred CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeec---CCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEE
Q psy8748 1714 GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGM---DNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRF 1790 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~---DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvaf 1790 (2004)
..|.+||...+.. +.+..+...+.+..|+|||+.|+..+. +..|.+|++.+++ ...+. ...+......|
T Consensus 179 ~~l~~~d~dg~~~-~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~----~~~l~---~~~~~~~~~~~ 250 (429)
T PRK03629 179 YELRVSDYDGYNQ-FVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA----VRQVA---SFPRHNGAPAF 250 (429)
T ss_pred eeEEEEcCCCCCC-EEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCC----eEEcc---CCCCCcCCeEE
Confidence 4799999765443 444556678999999999998886542 3578999987642 12222 22333456788
Q ss_pred eCCCc-EEEe-ecCC--eEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECC-C--eEEEEECCCCeEEEEEe
Q psy8748 1791 IDDTT-LLTG-SGDM--KIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVD-K--SCKLWDFREKKCVQTFF 1863 (2004)
Q Consensus 1791 sdd~~-LlSg-S~DG--tI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~D-G--sIrIWDlrs~k~I~tl~ 1863 (2004)
++++. ++.. +.+| .|++||+.+++.. .+ ..+...+....|+|||+.|+.++.+ | .|+++|+.++.. ..+.
T Consensus 251 SPDG~~La~~~~~~g~~~I~~~d~~tg~~~-~l-t~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt 327 (429)
T PRK03629 251 SPDGSKLAFALSKTGSLNLYVMDLASGQIR-QV-TDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP-QRIT 327 (429)
T ss_pred CCCCCEEEEEEcCCCCcEEEEEECCCCCEE-Ec-cCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe-EEee
Confidence 86664 4433 3344 5999999887654 23 2334567889999999988877754 4 455557766653 3333
Q ss_pred cCCCCeEEEEEeCCCCEEEEEECC---CeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCe---EEEE
Q psy8748 1864 GHEADVNSVCFHPSGLAFATGSED---KTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNN---VHVW 1937 (2004)
Q Consensus 1864 ~h~s~ItsIafSPdg~~LaSgS~D---GtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGs---IrIW 1937 (2004)
..........|+|||++++..+.+ ..|.+||+.++... .+... .......|+|||++|+.++.++. ++++
T Consensus 328 ~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~---~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~ 403 (429)
T PRK03629 328 WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT---FLDETPSIAPNGTMVIYSSSQGMGSVLNLV 403 (429)
T ss_pred cCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCCC---CCCCCceECCCCCEEEEEEcCCCceEEEEE
Confidence 444456678999999998876643 35888999877643 33221 12346789999999999887764 6777
Q ss_pred ECCCCeeeEEEccCCCCeEEEEEcCC
Q psy8748 1938 DLLKTTHNGVLSGHENRVTSISLSPN 1963 (2004)
Q Consensus 1938 DL~tge~l~tL~gHs~~VtsLaFSPD 1963 (2004)
++ +|.....+.+|.+.+...+|+|-
T Consensus 404 ~~-~G~~~~~l~~~~~~~~~p~Wsp~ 428 (429)
T PRK03629 404 ST-DGRFKARLPATDGQVKFPAWSPY 428 (429)
T ss_pred EC-CCCCeEECccCCCCcCCcccCCC
Confidence 77 56667778888889999999873
No 223
>KOG1188|consensus
Probab=99.26 E-value=8.6e-11 Score=136.92 Aligned_cols=191 Identities=16% Similarity=0.223 Sum_probs=151.1
Q ss_pred CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC--CCCEEEEEECCCeEEEEECCCCeEEEEE--ecCC-CC
Q psy8748 1794 TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP--DGQYFVTGSVDKSCKLWDFREKKCVQTF--FGHE-AD 1868 (2004)
Q Consensus 1794 ~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP--dg~~LaSGS~DGsIrIWDlrs~k~I~tl--~~h~-s~ 1868 (2004)
+.++++...|.|++||..+++.+ ..+.++...+..+.|.. ....+.+++.||+|++||+|.......+ ..+. .+
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l-~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~ 119 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLL-EEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTP 119 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhh-heecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCc
Confidence 46888999999999999998877 44578888888898876 4668999999999999999976554433 3444 45
Q ss_pred eEEEEEeCCCCEEEEEEC----CCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCe
Q psy8748 1869 VNSVCFHPSGLAFATGSE----DKTARLFDIRADQQIATYLPPNKNSGFTSCAVSS-SGRYIFCGSDDNNVHVWDLLKTT 1943 (2004)
Q Consensus 1869 ItsIafSPdg~~LaSgS~----DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSP-dG~~LaSGSsDGsIrIWDL~tge 1943 (2004)
..|++..-.++.+++|+. +-.|.+||++..+.........|...|+++.|+| +.+.|++|+.||-|.+||++...
T Consensus 120 f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~ 199 (376)
T KOG1188|consen 120 FICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDN 199 (376)
T ss_pred ceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCc
Confidence 667776667778888764 5679999999888743344467778999999999 56899999999999999996543
Q ss_pred e---eEEEccCCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCe
Q psy8748 1944 H---NGVLSGHENRVTSISLSPNG-MALVTSSWDQFVKVWQESNTI 1985 (2004)
Q Consensus 1944 ~---l~tL~gHs~~VtsLaFSPDg-~~LaSgS~DGtIrIWdlstg~ 1985 (2004)
. +...-.|...|..+.|..++ +.|.+-+..++..+|+++.+.
T Consensus 200 EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele~~~ 245 (376)
T KOG1188|consen 200 EEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELEDGS 245 (376)
T ss_pred chhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEccCCC
Confidence 2 22223477889999998776 458888999999999999875
No 224
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.25 E-value=4.1e-09 Score=130.65 Aligned_cols=248 Identities=14% Similarity=0.140 Sum_probs=155.6
Q ss_pred ceeEEEEeCCCCEEEEEe-CCCeEEEEECCCCceEEEeeCC-------CCceEEEEEecCCCEEEEe-ecCCeEEEEEcC
Q psy8748 1694 KVNSVHYSGDSRHCVSGS-LDGKLIIWDTWTGNKTQVIPLR-------SAWVMSVAFAQSGNFVACG-GMDNMCTVYDLN 1764 (2004)
Q Consensus 1694 ~VtsLaFSPDG~~LASGS-~DGtIrVWDl~Tgk~l~ti~~H-------t~~ItsLafSPdg~~LaSG-S~DGtIrVWDl~ 1764 (2004)
...++++|+||++++++. .++.+.++|.++.+.++.+... ...+.++..++.+..++.. -..+.|.+.|..
T Consensus 79 ~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~ 158 (369)
T PF02239_consen 79 NPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYS 158 (369)
T ss_dssp EEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETT
T ss_pred CcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEec
Confidence 346899999999988775 5799999999999999887643 3467788888888855554 445888777876
Q ss_pred CCCCCCcceEEEEEecCccceeeeEEeCCC-cEEE-eecCCeEEEEECCCCceeEEee---ccccCCeEEEEECCCC---
Q psy8748 1765 NRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLT-GSGDMKIVTWNLETGQRIHEVA---QAHIGDVVSISLSPDG--- 1836 (2004)
Q Consensus 1765 t~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlS-gS~DGtI~IWDl~tg~~i~~il---~~h~~~ItsLafSPdg--- 1836 (2004)
... .................|.+++ ++++ ...+..|-++|..+++....+. ..|..+...+ .||..
T Consensus 159 d~~-----~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~-php~~g~v 232 (369)
T PF02239_consen 159 DPK-----NLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANF-PHPGFGPV 232 (369)
T ss_dssp TSS-----CEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEE-EETTTEEE
T ss_pred ccc-----ccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccc-cCCCcceE
Confidence 542 1222233334455667777655 4444 4567799999999887765442 2244444433 23322
Q ss_pred -------CEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEE----ECCCeEEEEEccCCceeEEEc
Q psy8748 1837 -------QYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATG----SEDKTARLFDIRADQQIATYL 1905 (2004)
Q Consensus 1837 -------~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSg----S~DGtIrIWDLrtgk~i~t~~ 1905 (2004)
...++.-..+.+.+||....+.++.+.....+ ..+..+|+++++++. ...++|.++|.++.+...++.
T Consensus 233 w~~~~~~~~~~~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~tl~~~~~i~ 311 (369)
T PF02239_consen 233 WATSGLGYFAIPLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKKTLKVVKTIT 311 (369)
T ss_dssp EEEEBSSSSEEEEEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECCGTEEEE-HH
T ss_pred EeeccccceecccccCCccccchhhcCeEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECcCcceeEEEe
Confidence 22212222335667888899999999877666 788899999999998 445889999999987776663
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEeC--CCeEEEEECCCCeeeEEEc
Q psy8748 1906 PPNKNSGFTSCAVSSSGRYIFCGSD--DNNVHVWDLLKTTHNGVLS 1949 (2004)
Q Consensus 1906 ~~~~~s~ItsLafSPdG~~LaSGSs--DGsIrIWDL~tge~l~tL~ 1949 (2004)
... ...+..+.|+++|+++..+.. +|.|.+||..+.+.+..+.
T Consensus 312 ~~~-~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 312 PGP-GKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp HHH-T--EEEEEE-TTSSEEEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred ccC-CCcEeccEECCCCCEEEEEEecCCCEEEEEECCCcEEEEEEE
Confidence 221 234889999999998776554 3479999999999998876
No 225
>KOG2321|consensus
Probab=99.24 E-value=3.4e-10 Score=138.16 Aligned_cols=200 Identities=16% Similarity=0.235 Sum_probs=154.7
Q ss_pred eEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEE
Q psy8748 1696 NSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVI 1775 (2004)
Q Consensus 1696 tsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i 1775 (2004)
.+++++.-.--|..++....|+-++++.|+.+..+....+.++++..++...+|++|+.+|.|..||.+...........
T Consensus 137 RDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~ 216 (703)
T KOG2321|consen 137 RDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAA 216 (703)
T ss_pred ccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecc
Confidence 35556533333555555567999999999999999988899999999999999999999999999999876544443333
Q ss_pred EEEecCcc-----ceeeeEEeCCC-cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCC--CCEEEEEECCCe
Q psy8748 1776 RELLGYEG-----FLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPD--GQYFVTGSVDKS 1847 (2004)
Q Consensus 1776 ~sl~gh~~-----~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPd--g~~LaSGS~DGs 1847 (2004)
.....+.+ .|+++.|.+++ .+.+|+.+|.|.+||+++.+.+...-.+..-+|..+.|.+. ++.+++. ....
T Consensus 217 ~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~ 295 (703)
T KOG2321|consen 217 SSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRI 295 (703)
T ss_pred cccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEec-chHH
Confidence 33333333 48999999855 59999999999999999998875554455667889999774 3445544 4568
Q ss_pred EEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccC
Q psy8748 1848 CKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRA 1897 (2004)
Q Consensus 1848 IrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrt 1897 (2004)
++|||-.+|+....+.. ...++.+|+-|++.+++++-.++.+..|=+..
T Consensus 296 ~kiWd~~~Gk~~asiEp-t~~lND~C~~p~sGm~f~Ane~~~m~~yyiP~ 344 (703)
T KOG2321|consen 296 LKIWDECTGKPMASIEP-TSDLNDFCFVPGSGMFFTANESSKMHTYYIPS 344 (703)
T ss_pred hhhcccccCCceeeccc-cCCcCceeeecCCceEEEecCCCcceeEEccc
Confidence 99999999998887754 45599999999999999999888877776544
No 226
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.23 E-value=3.7e-09 Score=133.88 Aligned_cols=220 Identities=17% Similarity=0.183 Sum_probs=148.8
Q ss_pred CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCC
Q psy8748 1714 GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD 1793 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd 1793 (2004)
..|.+||. +|...+.+..+...+.+..|+|||+.|+..+..+
T Consensus 182 ~~l~~~d~-dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~------------------------------------- 223 (435)
T PRK05137 182 KRLAIMDQ-DGANVRYLTDGSSLVLTPRFSPNRQEITYMSYAN------------------------------------- 223 (435)
T ss_pred eEEEEECC-CCCCcEEEecCCCCeEeeEECCCCCEEEEEEecC-------------------------------------
Confidence 47889997 4555566677888899999999999888765321
Q ss_pred CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEE-EEECCCe--EEEEECCCCeEEEEEecCCCCeE
Q psy8748 1794 TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFV-TGSVDKS--CKLWDFREKKCVQTFFGHEADVN 1870 (2004)
Q Consensus 1794 ~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~La-SGS~DGs--IrIWDlrs~k~I~tl~~h~s~It 1870 (2004)
.+..|++||+.+++.. ....+.+.+.+.+|+|||+.++ +.+.+|. |++||+.++.. ..+..+.....
T Consensus 224 -------g~~~i~~~dl~~g~~~--~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~ 293 (435)
T PRK05137 224 -------GRPRVYLLDLETGQRE--LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDT 293 (435)
T ss_pred -------CCCEEEEEECCCCcEE--EeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccC
Confidence 1123455555544432 1123445566789999999776 4455554 88889887764 44555666677
Q ss_pred EEEEeCCCCEEEEEEC-CC--eEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCC---CeEEEEECCCCee
Q psy8748 1871 SVCFHPSGLAFATGSE-DK--TARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDD---NNVHVWDLLKTTH 1944 (2004)
Q Consensus 1871 sIafSPdg~~LaSgS~-DG--tIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsD---GsIrIWDL~tge~ 1944 (2004)
...|+|||+.++..+. +| .|++||+.++....... ....+....|+|+|++|+..+.+ ..|.+||+..+..
T Consensus 294 ~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~~lt~---~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~ 370 (435)
T PRK05137 294 SPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPRRISF---GGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE 370 (435)
T ss_pred ceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeEEeec---CCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce
Confidence 8999999998887764 33 58888887665433321 12345668899999999877643 3688899755443
Q ss_pred eEEEccCCCCeEEEEEcCCCCEEEEEECC------CeEEEEECCCCeE
Q psy8748 1945 NGVLSGHENRVTSISLSPNGMALVTSSWD------QFVKVWQESNTIV 1986 (2004)
Q Consensus 1945 l~tL~gHs~~VtsLaFSPDg~~LaSgS~D------GtIrIWdlstg~l 1986 (2004)
..+. +...+....|+|||+.|+..+.+ ..+++++++++..
T Consensus 371 -~~lt-~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~ 416 (435)
T PRK05137 371 -RILT-SGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE 416 (435)
T ss_pred -Eecc-CCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce
Confidence 3333 23357788999999998776543 2588888877654
No 227
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.23 E-value=1.5e-09 Score=137.30 Aligned_cols=233 Identities=18% Similarity=0.136 Sum_probs=158.5
Q ss_pred CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecC---CeEEEEEcCCCCCCCcceEEEEEecCccceeeeEE
Q psy8748 1714 GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMD---NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRF 1790 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~D---GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvaf 1790 (2004)
..|.+||.. +...+.+..+...+.+..|+|||+.|+.++.+ ..|.+|++.++. .. .+....+......|
T Consensus 184 ~~l~i~D~~-g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~----~~---~l~~~~g~~~~~~~ 255 (433)
T PRK04922 184 YALQVADSD-GYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQ----RE---LVASFRGINGAPSF 255 (433)
T ss_pred EEEEEECCC-CCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCC----EE---EeccCCCCccCceE
Confidence 469999974 44455566677789999999999998887643 469999997642 11 22233344556788
Q ss_pred eCCCc-EE-EeecCC--eEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEEC-CCe--EEEEECCCCeEEEEEe
Q psy8748 1791 IDDTT-LL-TGSGDM--KIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSV-DKS--CKLWDFREKKCVQTFF 1863 (2004)
Q Consensus 1791 sdd~~-Ll-SgS~DG--tI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~-DGs--IrIWDlrs~k~I~tl~ 1863 (2004)
++++. ++ +.+.+| .|++||+.+++.. . ...+.......+|+|||+.++.++. +|. |+++|+.+++.. .+.
T Consensus 256 SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-~-lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~-~lt 332 (433)
T PRK04922 256 SPDGRRLALTLSRDGNPEIYVMDLGSRQLT-R-LTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAE-RLT 332 (433)
T ss_pred CCCCCEEEEEEeCCCCceEEEEECCCCCeE-E-CccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeE-Eee
Confidence 86654 43 444454 6999999888754 2 2344445567899999998887764 444 777787766543 232
Q ss_pred cCCCCeEEEEEeCCCCEEEEEECCC---eEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCC---CeEEEE
Q psy8748 1864 GHEADVNSVCFHPSGLAFATGSEDK---TARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDD---NNVHVW 1937 (2004)
Q Consensus 1864 ~h~s~ItsIafSPdg~~LaSgS~DG---tIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsD---GsIrIW 1937 (2004)
.+.......+|+|+|++++..+.++ .|.+||+.+++.. .+. .. .......|+|||++++..+.+ +.|+++
T Consensus 333 ~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~--~~~~~p~~spdG~~i~~~s~~~g~~~L~~~ 408 (433)
T PRK04922 333 FQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PG--SLDESPSFAPNGSMVLYATREGGRGVLAAV 408 (433)
T ss_pred cCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CC--CCCCCceECCCCCEEEEEEecCCceEEEEE
Confidence 3334455789999999988766443 5999999877654 332 12 123457899999998877653 468888
Q ss_pred ECCCCeeeEEEccCCCCeEEEEEcC
Q psy8748 1938 DLLKTTHNGVLSGHENRVTSISLSP 1962 (2004)
Q Consensus 1938 DL~tge~l~tL~gHs~~VtsLaFSP 1962 (2004)
++. +.....+..+.+.+...+|+|
T Consensus 409 ~~~-g~~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 409 STD-GRVRQRLVSADGEVREPAWSP 432 (433)
T ss_pred ECC-CCceEEcccCCCCCCCCccCC
Confidence 884 445566666667788888876
No 228
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.22 E-value=1.1e-09 Score=138.15 Aligned_cols=235 Identities=20% Similarity=0.146 Sum_probs=154.7
Q ss_pred CCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecC---CeEEEEEcCCCCCCCcceEEEEEecCccceeeeE
Q psy8748 1713 DGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMD---NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCR 1789 (2004)
Q Consensus 1713 DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~D---GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssva 1789 (2004)
...|.+||. +|...+.+..+...+.+.+|+|||+.|+.++.+ ..|.+||+.++. . ..+....+......
T Consensus 175 ~~~L~~~D~-dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~----~---~~l~~~~g~~~~~~ 246 (427)
T PRK02889 175 RYQLQISDA-DGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGR----R---RVVANFKGSNSAPA 246 (427)
T ss_pred ccEEEEECC-CCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCC----E---EEeecCCCCccceE
Confidence 346888886 555555566677889999999999998877643 469999997653 1 12223334556778
Q ss_pred EeCCC-cEE-EeecCCeEEEE--ECCCCceeEEeeccccCCeEEEEECCCCCEEEEEEC-CCeEEEEE--CCCCeEEEEE
Q psy8748 1790 FIDDT-TLL-TGSGDMKIVTW--NLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSV-DKSCKLWD--FREKKCVQTF 1862 (2004)
Q Consensus 1790 fsdd~-~Ll-SgS~DGtI~IW--Dl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~-DGsIrIWD--lrs~k~I~tl 1862 (2004)
|++++ .++ +.+.+|...+| |...+.. ..+ ..+.+......|+|||+.++..+. +|...+|. ...+.. ..+
T Consensus 247 ~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~l-t~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~-~~l 323 (427)
T PRK02889 247 WSPDGRTLAVALSRDGNSQIYTVNADGSGL-RRL-TQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAA-QRV 323 (427)
T ss_pred ECCCCCEEEEEEccCCCceEEEEECCCCCc-EEC-CCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCce-EEE
Confidence 88665 444 45667765555 5554442 232 334455677899999998886654 45555554 444443 222
Q ss_pred ecCCCCeEEEEEeCCCCEEEEEECCC---eEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCC---eEEE
Q psy8748 1863 FGHEADVNSVCFHPSGLAFATGSEDK---TARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDN---NVHV 1936 (2004)
Q Consensus 1863 ~~h~s~ItsIafSPdg~~LaSgS~DG---tIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDG---sIrI 1936 (2004)
..........+|+|+|++++..+.++ .|.+||+.+++... +. .. .......|+|||++|+.++.++ .+++
T Consensus 324 t~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt-~~--~~~~~p~~spdg~~l~~~~~~~g~~~l~~ 399 (427)
T PRK02889 324 TFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVTA-LT-DT--TRDESPSFAPNGRYILYATQQGGRSVLAA 399 (427)
T ss_pred ecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeEE-cc-CC--CCccCceECCCCCEEEEEEecCCCEEEEE
Confidence 22233345678999999998777654 59999998876543 22 11 2235679999999998877544 3666
Q ss_pred EECCCCeeeEEEccCCCCeEEEEEcCC
Q psy8748 1937 WDLLKTTHNGVLSGHENRVTSISLSPN 1963 (2004)
Q Consensus 1937 WDL~tge~l~tL~gHs~~VtsLaFSPD 1963 (2004)
.++ ++.....+..+.+.+...+|+|-
T Consensus 400 ~~~-~g~~~~~l~~~~g~~~~p~wsp~ 425 (427)
T PRK02889 400 VSS-DGRIKQRLSVQGGDVREPSWGPF 425 (427)
T ss_pred EEC-CCCceEEeecCCCCCCCCccCCC
Confidence 676 56666667667788888888874
No 229
>KOG1409|consensus
Probab=99.21 E-value=7.9e-10 Score=128.97 Aligned_cols=253 Identities=15% Similarity=0.246 Sum_probs=188.5
Q ss_pred ccccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEE-CCCCceEEEee-CCCCceEEEEEecCCCEEEEeecCCe
Q psy8748 1680 VKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWD-TWTGNKTQVIP-LRSAWVMSVAFAQSGNFVACGGMDNM 1757 (2004)
Q Consensus 1680 lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWD-l~Tgk~l~ti~-~Ht~~ItsLafSPdg~~LaSGS~DGt 1757 (2004)
.++...+.++||.+.|++...-|...-+++.+.|.+++||- ...++.-..+. ....+++++.+.++...|++|-..|+
T Consensus 12 ~kp~ll~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngt 91 (404)
T KOG1409|consen 12 KKPELLSKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGT 91 (404)
T ss_pred cchhhhhhhcCchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecce
Confidence 45556788999999999999999888899999999999994 33455444443 34677999999999999999999999
Q ss_pred EEEEEcCCCCCCCcceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCC
Q psy8748 1758 CTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDG 1836 (2004)
Q Consensus 1758 IrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg 1836 (2004)
+.-+.+... .......+....|...+..+.|. +...+++.+.|..+..--.+.+..+....... ..+++.+.-.
T Consensus 92 vtefs~sed--fnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~--~~t~~~~d~~- 166 (404)
T KOG1409|consen 92 VTEFALSED--FNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFET--PASALQFDAL- 166 (404)
T ss_pred EEEEEhhhh--hhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeec--cCCCCceeeE-
Confidence 998887532 22445567778899999999888 45568888888777665556555443221111 1112222111
Q ss_pred CEEEEEECCCeEEEEECC--CCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeE
Q psy8748 1837 QYFVTGSVDKSCKLWDFR--EKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFT 1914 (2004)
Q Consensus 1837 ~~LaSGS~DGsIrIWDlr--s~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~It 1914 (2004)
+...|...|.|....+. .-..+.++.+|.+.+.+++|.+....+++|..|..+.+||+-.++- ..+....+...+.
T Consensus 167 -~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g-~~~el~gh~~kV~ 244 (404)
T KOG1409|consen 167 -YAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKG-TAYELQGHNDKVQ 244 (404)
T ss_pred -EEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcc-eeeeeccchhhhh
Confidence 55667677776665543 4456888999999999999999999999999999999999974433 3333456667788
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1915 SCAVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1915 sLafSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
.+...+--+.+++++.||.|.+||+
T Consensus 245 ~l~~~~~t~~l~S~~edg~i~~w~m 269 (404)
T KOG1409|consen 245 ALSYAQHTRQLISCGEDGGIVVWNM 269 (404)
T ss_pred hhhhhhhheeeeeccCCCeEEEEec
Confidence 8888888889999999999999997
No 230
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.21 E-value=9.7e-10 Score=124.68 Aligned_cols=151 Identities=21% Similarity=0.398 Sum_probs=111.7
Q ss_pred EEEEECCCCCEEEEEEC----------CCeEEEEECCC-CeEEEEEe-cCCCCeEEEEEeCCCCEEEEE--ECCCeEEEE
Q psy8748 1828 VSISLSPDGQYFVTGSV----------DKSCKLWDFRE-KKCVQTFF-GHEADVNSVCFHPSGLAFATG--SEDKTARLF 1893 (2004)
Q Consensus 1828 tsLafSPdg~~LaSGS~----------DGsIrIWDlrs-~k~I~tl~-~h~s~ItsIafSPdg~~LaSg--S~DGtIrIW 1893 (2004)
..+.|+++|.+|++-.. -|...+|.++. +..+..+. ...++|.+++|+|+|+.|++. ..++.|.+|
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 45788998887765443 12344554422 22333333 234579999999999987654 356799999
Q ss_pred EccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeC---CCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEE
Q psy8748 1894 DIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSD---DNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTS 1970 (2004)
Q Consensus 1894 DLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSs---DGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSg 1970 (2004)
|++ ++.+..+. ...+..+.|+|+|+++++|+. .|.|.+||+++.+.+.... ...++.++|+|||++++++
T Consensus 89 d~~-~~~i~~~~----~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~--~~~~t~~~WsPdGr~~~ta 161 (194)
T PF08662_consen 89 DVK-GKKIFSFG----TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFE--HSDATDVEWSPDGRYLATA 161 (194)
T ss_pred cCc-ccEeEeec----CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccc--cCcEEEEEEcCCCCEEEEE
Confidence 997 66666653 245678999999999999874 4779999999888887765 3357999999999999998
Q ss_pred EC------CCeEEEEECCCCe
Q psy8748 1971 SW------DQFVKVWQESNTI 1985 (2004)
Q Consensus 1971 S~------DGtIrIWdlstg~ 1985 (2004)
+. |+.++||+..+..
T Consensus 162 ~t~~r~~~dng~~Iw~~~G~~ 182 (194)
T PF08662_consen 162 TTSPRLRVDNGFKIWSFQGRL 182 (194)
T ss_pred EeccceeccccEEEEEecCeE
Confidence 64 7889999997653
No 231
>KOG2315|consensus
Probab=99.20 E-value=7.7e-09 Score=127.17 Aligned_cols=275 Identities=16% Similarity=0.269 Sum_probs=184.5
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEe-----ec-----CCeEEEE
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACG-----GM-----DNMCTVY 1761 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSG-----S~-----DGtIrVW 1761 (2004)
...++..++|++|+++|.+. ++.++|++..++..+.+.... .++++.|+|.|+++.+= .. .-.+.+|
T Consensus 34 ~~~~~v~~~S~~G~lfA~~~-~~~v~i~~~~~~~~~lt~~~~--~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~ 110 (566)
T KOG2315|consen 34 SRPCNVFAYSNNGRLFAYSD-NQVVKVFEIATLKVVLCVELK--KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVY 110 (566)
T ss_pred CCcceeEEEcCCCcEEEEEc-CCeEEEEEccCCcEEEEeccc--eeeeeeecccccccccccccccccCCCCCCCceeee
Confidence 34478889999999888765 578999999888655444433 68999999999988752 11 2347799
Q ss_pred EcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCC--EE
Q psy8748 1762 DLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQ--YF 1839 (2004)
Q Consensus 1762 Dl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~--~L 1839 (2004)
++.++. ....+......-++..|+.+..+++--..+.+++|+....+.+... -|...|+.+.++|.+. .+
T Consensus 111 ~vet~~------~~s~~q~k~Q~~W~~qfs~dEsl~arlv~nev~f~~~~~f~~~~~k--l~~~~i~~f~lSpgp~~~~v 182 (566)
T KOG2315|consen 111 NVETGV------QRSQIQKKMQNGWVPQFSIDESLAARLVSNEVQFYDLGSFKTIQHK--LSVSGITMLSLSPGPEPPFV 182 (566)
T ss_pred eeccce------ehhheehhhhcCcccccccchhhhhhhhcceEEEEecCCccceeee--eeccceeeEEecCCCCCceE
Confidence 887621 1111111111124677777777776666778888888765443222 2445566666666421 22
Q ss_pred EE-----EECCCeEEEEEC---------------------------------------------------------CCCe
Q psy8748 1840 VT-----GSVDKSCKLWDF---------------------------------------------------------REKK 1857 (2004)
Q Consensus 1840 aS-----GS~DGsIrIWDl---------------------------------------------------------rs~k 1857 (2004)
++ +|.-+.++||.. ....
T Consensus 183 AvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s 262 (566)
T KOG2315|consen 183 AVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGES 262 (566)
T ss_pred EEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCce
Confidence 22 122234555533 2111
Q ss_pred EEEEEecCCCCeEEEEEeCCCCEEEE--EECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCC---C
Q psy8748 1858 CVQTFFGHEADVNSVCFHPSGLAFAT--GSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDD---N 1932 (2004)
Q Consensus 1858 ~I~tl~~h~s~ItsIafSPdg~~LaS--gS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsD---G 1932 (2004)
+...+ ...++|.++.|+|+|+-|++ |-.-.++.|||++ ++.+..+.. ++-.++-|+|.|++|+.++-+ |
T Consensus 263 ~~V~L-~k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~e----gpRN~~~fnp~g~ii~lAGFGNL~G 336 (566)
T KOG2315|consen 263 VSVPL-LKEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFPE----GPRNTAFFNPHGNIILLAGFGNLPG 336 (566)
T ss_pred EEEec-CCCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCCC----CCccceEECCCCCEEEEeecCCCCC
Confidence 11111 23689999999999987655 4456789999987 666666632 445788999999999887654 8
Q ss_pred eEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEEC------CCeEEEEECCCCe
Q psy8748 1933 NVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSW------DQFVKVWQESNTI 1985 (2004)
Q Consensus 1933 sIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~------DGtIrIWdlstg~ 1985 (2004)
.|-|||+.+.+++..+.... -+-+.|+|||.+++|+.. |+.++||+..+..
T Consensus 337 ~mEvwDv~n~K~i~~~~a~~--tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~~ 393 (566)
T KOG2315|consen 337 DMEVWDVPNRKLIAKFKAAN--TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGSL 393 (566)
T ss_pred ceEEEeccchhhccccccCC--ceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCce
Confidence 99999999988888877533 456789999999999864 7889999998763
No 232
>KOG3881|consensus
Probab=99.17 E-value=1.3e-09 Score=129.15 Aligned_cols=266 Identities=17% Similarity=0.159 Sum_probs=191.1
Q ss_pred cccceeEEEEeCCCC--EEEEEeCCCeEEEEECCCCceEEE------eeCCCCceEEEEEecCCCEEEEeecCCeEEEEE
Q psy8748 1691 HINKVNSVHYSGDSR--HCVSGSLDGKLIIWDTWTGNKTQV------IPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYD 1762 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~--~LASGS~DGtIrVWDl~Tgk~l~t------i~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWD 1762 (2004)
....|..++|.-+++ .+...+.|..+..+.+..+..... .....++|..++.. ...|++|-.+|.+.+|.
T Consensus 54 ~~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~~--dg~Litc~~sG~l~~~~ 131 (412)
T KOG3881|consen 54 ELDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKLA--DGTLITCVSSGNLQVRH 131 (412)
T ss_pred hhhhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhhc--CCEEEEEecCCcEEEEe
Confidence 446788888876554 455554666777777766554433 23455667766654 56788888999999999
Q ss_pred cCCCCCCCcceEEEEEecCccceeeeEEeC--CCcEEEeecC--CeEEEEECCCCceeEEeecc--------ccCCeEEE
Q psy8748 1763 LNNRDSTGAAKVIRELLGYEGFLSSCRFID--DTTLLTGSGD--MKIVTWNLETGQRIHEVAQA--------HIGDVVSI 1830 (2004)
Q Consensus 1763 l~t~~~~~~~k~i~sl~gh~~~Vssvafsd--d~~LlSgS~D--GtI~IWDl~tg~~i~~il~~--------h~~~ItsL 1830 (2004)
...+.... .....+..+ ..+..+.-.+ ...+++|+.. ..+.+||++..+.+.....- -.-.++++
T Consensus 132 ~k~~d~hs--s~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi 208 (412)
T KOG3881|consen 132 DKSGDLHS--SKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDI 208 (412)
T ss_pred ccCCcccc--ccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccc
Confidence 97654211 111112111 2233333332 2345668888 88999999988655443211 12246788
Q ss_pred EECCC--CCEEEEEECCCeEEEEECCCC-eEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCC
Q psy8748 1831 SLSPD--GQYFVTGSVDKSCKLWDFREK-KCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPP 1907 (2004)
Q Consensus 1831 afSPd--g~~LaSGS~DGsIrIWDlrs~-k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~ 1907 (2004)
.|-+. ...|++++.-+.+++||.+.+ +++..+.-.+.+++++...|+++.+++|...|.+..||++.++...... .
T Consensus 209 ~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~-k 287 (412)
T KOG3881|consen 209 RFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGL-K 287 (412)
T ss_pred eecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeecccc-C
Confidence 89887 789999999999999999854 5788888888999999999999999999999999999999988876632 4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCC
Q psy8748 1908 NKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPN 1963 (2004)
Q Consensus 1908 ~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPD 1963 (2004)
+..+.++++..+|.++++++++-|..+||+|+.+.+.+.... -...++++-+.++
T Consensus 288 g~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvY-vKs~lt~il~~~~ 342 (412)
T KOG3881|consen 288 GITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVY-VKSRLTFILLRDD 342 (412)
T ss_pred CccCCcceEEEcCCCceEEeeccceeEEEeecccchhhhhhh-hhccccEEEecCC
Confidence 556889999999999999999999999999998866554432 2445666666543
No 233
>KOG1310|consensus
Probab=99.16 E-value=1.7e-10 Score=139.69 Aligned_cols=211 Identities=23% Similarity=0.377 Sum_probs=161.1
Q ss_pred EEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC--CCCEEEEEECCCeEEEE
Q psy8748 1775 IRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP--DGQYFVTGSVDKSCKLW 1851 (2004)
Q Consensus 1775 i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP--dg~~LaSGS~DGsIrIW 1851 (2004)
...+.||.+.|.++.|. ++..+++|++|-.+.+||.-..+.++.+..+|...|.++.|-| +.+.+++|..|..|+++
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lf 122 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLF 122 (758)
T ss_pred hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEE
Confidence 45688999999999999 4556889999999999999999999999999999999999999 56689999999999999
Q ss_pred ECCC----------CeEEEEEecCCCCeEEEEEeCCC-CEEEEEECCCeEEEEEccCCceeEEE--------cCCCCCCC
Q psy8748 1852 DFRE----------KKCVQTFFGHEADVNSVCFHPSG-LAFATGSEDKTARLFDIRADQQIATY--------LPPNKNSG 1912 (2004)
Q Consensus 1852 Dlrs----------~k~I~tl~~h~s~ItsIafSPdg-~~LaSgS~DGtIrIWDLrtgk~i~t~--------~~~~~~s~ 1912 (2004)
|+.. ......+..|...|..++-.|++ ..|.++++||+|+-+|++.......- .....--.
T Consensus 123 dl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~lie 202 (758)
T KOG1310|consen 123 DLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIE 202 (758)
T ss_pred ecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhhe
Confidence 9984 23345566788889999999988 78999999999999999863221100 00111234
Q ss_pred eEEEEEcC-CCCEEEEEeCCCeEEEEECCC--------Ce----------eeEEE-ccCC--------C---CeEEEEEc
Q psy8748 1913 FTSCAVSS-SGRYIFCGSDDNNVHVWDLLK--------TT----------HNGVL-SGHE--------N---RVTSISLS 1961 (2004)
Q Consensus 1913 ItsLafSP-dG~~LaSGSsDGsIrIWDL~t--------ge----------~l~tL-~gHs--------~---~VtsLaFS 1961 (2004)
..|+.++| +..+|++|+.|--.++||.+. +. ++..+ .+|- . .++-++|+
T Consensus 203 lk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~~~~t~vtfn 282 (758)
T KOG1310|consen 203 LKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYITCCTYVTFN 282 (758)
T ss_pred eeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccceeeeEEEEEC
Confidence 67899999 457899999999999999421 11 12222 1222 1 25677899
Q ss_pred CCCCEEEEEECCCeEEEEECCCCe
Q psy8748 1962 PNGMALVTSSWDQFVKVWQESNTI 1985 (2004)
Q Consensus 1962 PDg~~LaSgS~DGtIrIWdlstg~ 1985 (2004)
|+|.-|...-..-.|++|++..++
T Consensus 283 pNGtElLvs~~gEhVYlfdvn~~~ 306 (758)
T KOG1310|consen 283 PNGTELLVSWGGEHVYLFDVNEDK 306 (758)
T ss_pred CCCcEEEEeeCCeEEEEEeecCCC
Confidence 999876665555679999998775
No 234
>KOG4497|consensus
Probab=99.16 E-value=1.9e-09 Score=124.85 Aligned_cols=273 Identities=15% Similarity=0.191 Sum_probs=180.8
Q ss_pred cccccccceeEEEEeCCCCEE-EEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCC
Q psy8748 1687 SLKGHINKVNSVHYSGDSRHC-VSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNN 1765 (2004)
Q Consensus 1687 sL~GHt~~VtsLaFSPDG~~L-ASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t 1765 (2004)
.+.....++.+++|||||+.+ .+...|-.|.||.+.+.+.... +.....+..++|+|||++.+.++.....-.+.+..
T Consensus 86 kIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~-~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~ 164 (447)
T KOG4497|consen 86 KIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLL-PHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISS 164 (447)
T ss_pred EeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEe-cccccCceeEEECCCCceeeeeecccHHHHHHHHh
Confidence 345566789999999999754 5666789999999987665543 33345578999999999998887543211111110
Q ss_pred CCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECC
Q psy8748 1766 RDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVD 1845 (2004)
Q Consensus 1766 ~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~D 1845 (2004)
. ......+.+.-..-..+.+.|++++. .+.+||---.-.+. .....-.+..++|+|.++++++|+.|
T Consensus 165 c---~~W~ll~~f~~dT~DltgieWsPdg~--------~laVwd~~Leykv~--aYe~~lG~k~v~wsP~~qflavGsyD 231 (447)
T KOG4497|consen 165 C---KAWILLKEFKLDTIDLTGIEWSPDGN--------WLAVWDNVLEYKVY--AYERGLGLKFVEWSPCNQFLAVGSYD 231 (447)
T ss_pred h---HHHHHHHhcCCCcccccCceECCCCc--------EEEEecchhhheee--eeeeccceeEEEeccccceEEeeccc
Confidence 0 01122233333344556677776543 34566643222221 11233468899999999999999999
Q ss_pred CeEEEEECCCCeE------------------------------------------------------------EEEEe--
Q psy8748 1846 KSCKLWDFREKKC------------------------------------------------------------VQTFF-- 1863 (2004)
Q Consensus 1846 GsIrIWDlrs~k~------------------------------------------------------------I~tl~-- 1863 (2004)
+.+++.+--+.+. +..++
T Consensus 232 ~~lrvlnh~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~ 311 (447)
T KOG4497|consen 232 QMLRVLNHFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPP 311 (447)
T ss_pred hhhhhhceeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCC
Confidence 9888765321110 00111
Q ss_pred ----cCCCCeEEEEEeCCCCEEEEEEC--CCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEE
Q psy8748 1864 ----GHEADVNSVCFHPSGLAFATGSE--DKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVW 1937 (2004)
Q Consensus 1864 ----~h~s~ItsIafSPdg~~LaSgS~--DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIW 1937 (2004)
.....+.-++|++|..++++-.. -+.+.+||++..+....+. ...+|....|+|....++.+.....+++|
T Consensus 312 tD~pnPk~g~g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLi---Qk~piraf~WdP~~prL~vctg~srLY~W 388 (447)
T KOG4497|consen 312 TDFPNPKCGAGKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLI---QKHPIRAFEWDPGRPRLVVCTGKSRLYFW 388 (447)
T ss_pred CCCCCcccccceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhh---hccceeEEEeCCCCceEEEEcCCceEEEE
Confidence 11233566899999988887643 2469999998776654442 23569999999999889888888889999
Q ss_pred ECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEE
Q psy8748 1938 DLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVK 1977 (2004)
Q Consensus 1938 DL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIr 1977 (2004)
...-...+.. .+..-.|..+.|.-+|..++-++.|....
T Consensus 389 ~psg~~~V~v-P~~GF~i~~l~W~~~g~~i~l~~kDafc~ 427 (447)
T KOG4497|consen 389 APSGPRVVGV-PKKGFNIQKLQWLQPGEFIVLCGKDAFCV 427 (447)
T ss_pred cCCCceEEec-CCCCceeeeEEecCCCcEEEEEcCCceEE
Confidence 9765444433 33446799999999999999999997543
No 235
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.16 E-value=2.9e-07 Score=113.46 Aligned_cols=278 Identities=17% Similarity=0.224 Sum_probs=178.5
Q ss_pred EEEEeCC----CeEEEEEC--CCCceEEEe-eCCCCceEEEEEecCCCEEEEeec----CCeEEEEEcCCCCCCCcceEE
Q psy8748 1707 CVSGSLD----GKLIIWDT--WTGNKTQVI-PLRSAWVMSVAFAQSGNFVACGGM----DNMCTVYDLNNRDSTGAAKVI 1775 (2004)
Q Consensus 1707 LASGS~D----GtIrVWDl--~Tgk~l~ti-~~Ht~~ItsLafSPdg~~LaSGS~----DGtIrVWDl~t~~~~~~~k~i 1775 (2004)
++.|+.+ +.|.+|++ .+++....- .........++++|++++|.++.. +|.|..|++.... .....+
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~--g~L~~~ 79 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVAEGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDT--GTLTLL 79 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEEESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTT--TEEEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeecCCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCc--ceeEEe
Confidence 4455554 68888877 445433221 113344667899999999988876 5799999987641 233444
Q ss_pred EEEecCccceeeeEEeCCC-cEEEee-cCCeEEEEECCCCceeEEe---e----------ccccCCeEEEEECCCCCEEE
Q psy8748 1776 RELLGYEGFLSSCRFIDDT-TLLTGS-GDMKIVTWNLETGQRIHEV---A----------QAHIGDVVSISLSPDGQYFV 1840 (2004)
Q Consensus 1776 ~sl~gh~~~Vssvafsdd~-~LlSgS-~DGtI~IWDl~tg~~i~~i---l----------~~h~~~ItsLafSPdg~~La 1840 (2004)
............++..+++ .++++. .+|.|.++++.....+... . ........++.++|+|++++
T Consensus 80 ~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~ 159 (345)
T PF10282_consen 80 NSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVY 159 (345)
T ss_dssp EEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEE
T ss_pred eeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEE
Confidence 4444334444556666444 455554 6899999999874322222 1 01234578999999999988
Q ss_pred EEEC-CCeEEEEECCCCe--E--EEEE-ecCCCCeEEEEEeCCCCEEEEEEC-CCeEEEEEcc--CCce--eEEEcCC--
Q psy8748 1841 TGSV-DKSCKLWDFREKK--C--VQTF-FGHEADVNSVCFHPSGLAFATGSE-DKTARLFDIR--ADQQ--IATYLPP-- 1907 (2004)
Q Consensus 1841 SGS~-DGsIrIWDlrs~k--~--I~tl-~~h~s~ItsIafSPdg~~LaSgS~-DGtIrIWDLr--tgk~--i~t~~~~-- 1907 (2004)
+... ...|++|++.... . ...+ .......+.+.|+|+++++++..+ ++.|.+|++. ++.. .......
T Consensus 160 v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~ 239 (345)
T PF10282_consen 160 VPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPE 239 (345)
T ss_dssp EEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCET
T ss_pred EEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccc
Confidence 8753 3479999987654 2 1222 244567899999999998877654 7789999988 3322 2222111
Q ss_pred --CCCCCeEEEEEcCCCCEEEEEeC-CCeEEEEECC--CCe--eeEEEccCCCCeEEEEEcCCCCEEEEEE-CCCeEEEE
Q psy8748 1908 --NKNSGFTSCAVSSSGRYIFCGSD-DNNVHVWDLL--KTT--HNGVLSGHENRVTSISLSPNGMALVTSS-WDQFVKVW 1979 (2004)
Q Consensus 1908 --~~~s~ItsLafSPdG~~LaSGSs-DGsIrIWDL~--tge--~l~tL~gHs~~VtsLaFSPDg~~LaSgS-~DGtIrIW 1979 (2004)
........++++|||++|+++.. ++.|.+|++. +++ .+..+.........++++|+|++|++++ .++.|.+|
T Consensus 240 ~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf 319 (345)
T PF10282_consen 240 GFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVF 319 (345)
T ss_dssp TSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEE
T ss_pred cccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEE
Confidence 11125788999999999988764 6789999993 233 3344444455689999999999999887 46799999
Q ss_pred ECC--CCeE
Q psy8748 1980 QES--NTIV 1986 (2004)
Q Consensus 1980 dls--tg~l 1986 (2004)
+++ +|.+
T Consensus 320 ~~d~~tG~l 328 (345)
T PF10282_consen 320 DIDPDTGKL 328 (345)
T ss_dssp EEETTTTEE
T ss_pred EEeCCCCcE
Confidence 874 6654
No 236
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.15 E-value=1.4e-08 Score=123.55 Aligned_cols=279 Identities=17% Similarity=0.206 Sum_probs=181.1
Q ss_pred ceeEEEEeCCCCEEEEEeCC---------------CeEEEEECCCCceEEEeeCCCCc--eE-EEEEecCCCEEEEeecC
Q psy8748 1694 KVNSVHYSGDSRHCVSGSLD---------------GKLIIWDTWTGNKTQVIPLRSAW--VM-SVAFAQSGNFVACGGMD 1755 (2004)
Q Consensus 1694 ~VtsLaFSPDG~~LASGS~D---------------GtIrVWDl~Tgk~l~ti~~Ht~~--It-sLafSPdg~~LaSGS~D 1755 (2004)
.|..+.|||+++||.+-+.. ..+.|||+.+|..+..+.....+ .. -+.|+-+.++.+-. ..
T Consensus 73 ~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~ 151 (561)
T COG5354 73 DVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VG 151 (561)
T ss_pred CceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-cc
Confidence 45566667777777665432 35999999999999998876655 44 67888888776654 33
Q ss_pred CeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCC---CcEEE-----eecCCeEEEEECCCCceeEEeeccccCCe
Q psy8748 1756 NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD---TTLLT-----GSGDMKIVTWNLETGQRIHEVAQAHIGDV 1827 (2004)
Q Consensus 1756 GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd---~~LlS-----gS~DGtI~IWDl~tg~~i~~il~~h~~~I 1827 (2004)
..++++++...-.......++ ...+....+++. ..++. .+..+.+++|.+..+..+.... -....-
T Consensus 152 ~sl~i~e~t~n~~~~p~~~lr-----~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~-lfk~~~ 225 (561)
T COG5354 152 SSLYIHEITDNIEEHPFKNLR-----PVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKN-LFKVSG 225 (561)
T ss_pred CeEEEEecCCccccCchhhcc-----ccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeee-eEeecc
Confidence 468999973221111111111 123444444433 11222 4567889999988666553321 112223
Q ss_pred EEEEECCCCCEEEEEE-----------CCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEE--CCCeEEEEE
Q psy8748 1828 VSISLSPDGQYFVTGS-----------VDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGS--EDKTARLFD 1894 (2004)
Q Consensus 1828 tsLafSPdg~~LaSGS-----------~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS--~DGtIrIWD 1894 (2004)
..+.|++.|+++++-. ....++++++....+ .......++|..++|.|.++.|++.+ .+..+.++|
T Consensus 226 ~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~~~~e~~i-~V~~~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~ 304 (561)
T COG5354 226 VQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLLRITERSI-PVEKDLKDPVHDFTWEPLSSRFAVISGYMPASVSVFD 304 (561)
T ss_pred cEEEEecCCceEEEEEEEeeecccceeccceEEEEeeccccc-ceeccccccceeeeecccCCceeEEecccccceeecc
Confidence 4678898888766422 124688888874443 33336688999999999888766554 678899999
Q ss_pred ccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCC---CeEEEEECCCCeee-EEEccCCCCeEEEEEcCCCCEEEEE
Q psy8748 1895 IRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDD---NNVHVWDLLKTTHN-GVLSGHENRVTSISLSPNGMALVTS 1970 (2004)
Q Consensus 1895 Lrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsD---GsIrIWDL~tge~l-~tL~gHs~~VtsLaFSPDg~~LaSg 1970 (2004)
++.. .. .+.+... =..+.|+|.+++++.++-| |.|-+||......+ ..+.+- ..+-+.|+||+.++.+.
T Consensus 305 lr~N-l~-~~~Pe~~---rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~--n~s~~~wspd~qF~~~~ 377 (561)
T COG5354 305 LRGN-LR-FYFPEQK---RNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGL--NTSYCDWSPDGQFYDTD 377 (561)
T ss_pred cccc-eE-EecCCcc---cccccccCcccEEEEecCCccccceEEeccCCceEEEEEeecC--CceEeeccCCceEEEec
Confidence 9855 33 3322222 3557899999999987665 78999998654443 355543 34556899999998876
Q ss_pred E------CCCeEEEEECCCCeEE
Q psy8748 1971 S------WDQFVKVWQESNTIVW 1987 (2004)
Q Consensus 1971 S------~DGtIrIWdlstg~l~ 1987 (2004)
. .|..|.||++.+....
T Consensus 378 ~ts~k~~~Dn~i~l~~v~g~~~f 400 (561)
T COG5354 378 TTSEKLRVDNSIKLWDVYGAKVF 400 (561)
T ss_pred CCCcccccCcceEEEEecCchhh
Confidence 3 3788999999886544
No 237
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.14 E-value=7.4e-09 Score=131.11 Aligned_cols=225 Identities=14% Similarity=0.104 Sum_probs=150.3
Q ss_pred cccccccccccceeEEEEeCCCCEEEEEeC---CCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEe-ecCCeE
Q psy8748 1683 MPKKSLKGHINKVNSVHYSGDSRHCVSGSL---DGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACG-GMDNMC 1758 (2004)
Q Consensus 1683 ~pi~sL~GHt~~VtsLaFSPDG~~LASGS~---DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSG-S~DGtI 1758 (2004)
...+.+..|...+.+.+|+|||+.|+..+. +..|++||+.+|+.. .+..+.+.+.+..|+|||+.++.. +.+|.
T Consensus 192 ~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~- 269 (435)
T PRK05137 192 ANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGN- 269 (435)
T ss_pred CCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCC-
Confidence 344567788889999999999999887764 468999999888654 344556677888999999877643 33332
Q ss_pred EEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCE
Q psy8748 1759 TVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQY 1838 (2004)
Q Consensus 1759 rVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~ 1838 (2004)
..|++||+.++... . +..+.+......|+|||+.
T Consensus 270 --------------------------------------------~~Iy~~d~~~~~~~-~-Lt~~~~~~~~~~~spDG~~ 303 (435)
T PRK05137 270 --------------------------------------------TDIYTMDLRSGTTT-R-LTDSPAIDTSPSYSPDGSQ 303 (435)
T ss_pred --------------------------------------------ceEEEEECCCCceE-E-ccCCCCccCceeEcCCCCE
Confidence 22444444444332 1 1223344556899999998
Q ss_pred EEEEEC-CC--eEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECC---CeEEEEEccCCceeEEEcCCCCCCC
Q psy8748 1839 FVTGSV-DK--SCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSED---KTARLFDIRADQQIATYLPPNKNSG 1912 (2004)
Q Consensus 1839 LaSGS~-DG--sIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~D---GtIrIWDLrtgk~i~t~~~~~~~s~ 1912 (2004)
++..+. +| .|++||+..+.. ..+..+...+....|+|+|+.++..+.+ ..|.+||+.++.. ..+. .. ..
T Consensus 304 i~f~s~~~g~~~Iy~~d~~g~~~-~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~~-~~lt-~~--~~ 378 (435)
T PRK05137 304 IVFESDRSGSPQLYVMNADGSNP-RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSGE-RILT-SG--FL 378 (435)
T ss_pred EEEEECCCCCCeEEEEECCCCCe-EEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCce-Eecc-CC--CC
Confidence 887764 33 688889876654 3343345556778999999999877653 3588888765443 3332 12 23
Q ss_pred eEEEEEcCCCCEEEEEeCC------CeEEEEECCCCeeeEEEccCCCCeEEEEEcC
Q psy8748 1913 FTSCAVSSSGRYIFCGSDD------NNVHVWDLLKTTHNGVLSGHENRVTSISLSP 1962 (2004)
Q Consensus 1913 ItsLafSPdG~~LaSGSsD------GsIrIWDL~tge~l~tL~gHs~~VtsLaFSP 1962 (2004)
+....|+|||++|+..+.+ ..++++|+..+.. ..+. ..+.+...+|+|
T Consensus 379 ~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~-~~~~~~~p~Wsp 432 (435)
T PRK05137 379 VEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVP-TPGDASDPAWSP 432 (435)
T ss_pred CCCCeECCCCCEEEEEEccCCCCCcceEEEEECCCCce-EEcc-CCCCccCcccCC
Confidence 5678999999998775543 3688888865544 3443 244567777776
No 238
>KOG1354|consensus
Probab=99.13 E-value=3.8e-09 Score=123.21 Aligned_cols=280 Identities=20% Similarity=0.291 Sum_probs=184.6
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCc-----eEEEeeCCC------------CceEEEEEecCCC--EEEEe
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGN-----KTQVIPLRS------------AWVMSVAFAQSGN--FVACG 1752 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk-----~l~ti~~Ht------------~~ItsLafSPdg~--~LaSG 1752 (2004)
.+-|.++.|...|.+||||..+|.|.++.-.... ....+..|. ..|..+.|.++++ .++..
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 4578999999999999999999999999533222 223344443 3588899998764 67777
Q ss_pred ecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEE
Q psy8748 1753 GMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISL 1832 (2004)
Q Consensus 1753 S~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLaf 1832 (2004)
+.|.+|++|.+........... ....+....++.+... +.+..+-.+. ..+.......|.--|.++.+
T Consensus 105 tNdktiKlWKi~er~~k~~~~~-~~~~~~~~~~~~lr~p-----~~~~~~~~ve------a~prRv~aNaHtyhiNSIS~ 172 (433)
T KOG1354|consen 105 TNDKTIKLWKIRERGSKKEGYN-LPEEGPPGTITSLRLP-----VEGRHDLEVE------ASPRRVYANAHTYHINSISV 172 (433)
T ss_pred cCCcceeeeeeecccccccccc-ccccCCCCccceeece-----eeccccceee------eeeeeeccccceeEeeeeee
Confidence 8899999999976432211000 0011111222222111 1111111111 01222334578888999999
Q ss_pred CCCCCEEEEEECCCeEEEEECCCCe---EEEEEecCC-----CCeEEEEEeC-CCCEEEEEECCCeEEEEEccCCcee--
Q psy8748 1833 SPDGQYFVTGSVDKSCKLWDFREKK---CVQTFFGHE-----ADVNSVCFHP-SGLAFATGSEDKTARLFDIRADQQI-- 1901 (2004)
Q Consensus 1833 SPdg~~LaSGS~DGsIrIWDlrs~k---~I~tl~~h~-----s~ItsIafSP-dg~~LaSgS~DGtIrIWDLrtgk~i-- 1901 (2004)
+.|+..++++. |=.|.+|++.-.. .+..++.+. .-|++..|+| ..+.|+..+..|+|++-|++.....
T Consensus 173 NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~ 251 (433)
T KOG1354|consen 173 NSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDA 251 (433)
T ss_pred cCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcc
Confidence 99999888775 7789999986322 233334433 3588899999 4567888889999999999843221
Q ss_pred --EEEcCC----------CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC-CCCeeeEEEccCCC------------C--
Q psy8748 1902 --ATYLPP----------NKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL-LKTTHNGVLSGHEN------------R-- 1954 (2004)
Q Consensus 1902 --~t~~~~----------~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL-~tge~l~tL~gHs~------------~-- 1954 (2004)
..+..+ .....|..+.|+++|+|+++-+. -+|++||+ ...+++.++..|.. .
T Consensus 252 hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~If 330 (433)
T KOG1354|consen 252 HSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIF 330 (433)
T ss_pred hhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchh
Confidence 111111 11235788999999999998643 58999999 56677777765532 2
Q ss_pred -eEEEEEcCCCCEEEEEECCCeEEEEECCCCe
Q psy8748 1955 -VTSISLSPNGMALVTSSWDQFVKVWQESNTI 1985 (2004)
Q Consensus 1955 -VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~ 1985 (2004)
-..++|+.++.+++||+.....++|+...|.
T Consensus 331 dKFec~~sg~~~~v~TGsy~n~frvf~~~~gs 362 (433)
T KOG1354|consen 331 DKFECSWSGNDSYVMTGSYNNVFRVFNLARGS 362 (433)
T ss_pred heeEEEEcCCcceEecccccceEEEecCCCCc
Confidence 2567899999999999999999999977653
No 239
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.13 E-value=1.4e-08 Score=128.59 Aligned_cols=215 Identities=19% Similarity=0.128 Sum_probs=145.4
Q ss_pred CeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCC-cEEEeec---CCeEEEEECCCCceeEEeeccccCCeEEEE
Q psy8748 1756 NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSG---DMKIVTWNLETGQRIHEVAQAHIGDVVSIS 1831 (2004)
Q Consensus 1756 GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~---DGtI~IWDl~tg~~i~~il~~h~~~ItsLa 1831 (2004)
..|.+||.+.. ..+.+..+...+....|++++ .++..+. +..|++||+.+++... + ....+...+..
T Consensus 184 ~~l~i~D~~g~-------~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l-~~~~g~~~~~~ 254 (433)
T PRK04922 184 YALQVADSDGY-------NPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-V-ASFRGINGAPS 254 (433)
T ss_pred EEEEEECCCCC-------CceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-e-ccCCCCccCce
Confidence 36888887542 123344556678888888665 4555543 3479999998887542 2 23344556789
Q ss_pred ECCCCCEEEE-EECCC--eEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEEC-CCe--EEEEEccCCceeEEEc
Q psy8748 1832 LSPDGQYFVT-GSVDK--SCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSE-DKT--ARLFDIRADQQIATYL 1905 (2004)
Q Consensus 1832 fSPdg~~LaS-GS~DG--sIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~-DGt--IrIWDLrtgk~i~t~~ 1905 (2004)
|+|||+.++. .+.+| .|++||+.+++. ..+..+.......+|+|||+.++.++. +|. |+++|+.+++.....
T Consensus 255 ~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt- 332 (433)
T PRK04922 255 FSPDGRRLALTLSRDGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLT- 332 (433)
T ss_pred ECCCCCEEEEEEeCCCCceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEee-
Confidence 9999997764 45555 599999988764 345455555667899999998887764 444 666777666543322
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEeCCC---eEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECC---CeEEEE
Q psy8748 1906 PPNKNSGFTSCAVSSSGRYIFCGSDDN---NVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWD---QFVKVW 1979 (2004)
Q Consensus 1906 ~~~~~s~ItsLafSPdG~~LaSGSsDG---sIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~D---GtIrIW 1979 (2004)
... ......+|+|+|++|+..+.++ .|.+||+.+++.. .+. +........|+|||++++..+.+ +.|.++
T Consensus 333 ~~g--~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~ 408 (433)
T PRK04922 333 FQG--NYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAPNGSMVLYATREGGRGVLAAV 408 (433)
T ss_pred cCC--CCccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECCCCCEEEEEEecCCceEEEEE
Confidence 122 2344689999999998765443 6999999877654 333 33345677999999988877653 468888
Q ss_pred ECCCCe
Q psy8748 1980 QESNTI 1985 (2004)
Q Consensus 1980 dlstg~ 1985 (2004)
+.+++.
T Consensus 409 ~~~g~~ 414 (433)
T PRK04922 409 STDGRV 414 (433)
T ss_pred ECCCCc
Confidence 887653
No 240
>KOG2394|consensus
Probab=99.10 E-value=9.4e-10 Score=133.77 Aligned_cols=196 Identities=16% Similarity=0.229 Sum_probs=135.9
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCceEEEee----CCCCceEEEEEecC-CCEEEEeecCCeEEEEEcCCCCCCCcceEEE
Q psy8748 1702 GDSRHCVSGSLDGKLIIWDTWTGNKTQVIP----LRSAWVMSVAFAQS-GNFVACGGMDNMCTVYDLNNRDSTGAAKVIR 1776 (2004)
Q Consensus 1702 PDG~~LASGS~DGtIrVWDl~Tgk~l~ti~----~Ht~~ItsLafSPd-g~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~ 1776 (2004)
+++--++.|-.-|.|.+.|....+..+.+. .....|+|+.|-|. ...++++-.+|.+.+||......
T Consensus 183 ~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~-------- 254 (636)
T KOG2394|consen 183 PKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCG-------- 254 (636)
T ss_pred CCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeecccccc--------
Confidence 566678888888999988866532222121 23478999999995 45677778899999998732110
Q ss_pred EEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1777 ELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREK 1856 (2004)
Q Consensus 1777 sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~ 1856 (2004)
........+...+.+......+. .+...+... .-..+.|..++|+|||++|++.+.||.++|||..+.
T Consensus 255 -----~t~p~~~~~k~~~~f~i~t~ksk------~~rNPv~~w-~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~ 322 (636)
T KOG2394|consen 255 -----ATAPSYQALKDGDQFAILTSKSK------KTRNPVARW-HIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQ 322 (636)
T ss_pred -----CCCCcccccCCCCeeEEeeeecc------ccCCcccee-EeccccccceeEcCCCceEEEEecCceEEEeeccHH
Confidence 00001111112222222211110 011122121 123347899999999999999999999999999988
Q ss_pred eEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEc
Q psy8748 1857 KCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVS 1919 (2004)
Q Consensus 1857 k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafS 1919 (2004)
+.+..++.--+...|++|+|||++|++|++|.-|.||.+...+.+..- ++|..+|..++|+
T Consensus 323 eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARG--qGHkSWVs~VaFD 383 (636)
T KOG2394|consen 323 ELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARG--QGHKSWVSVVAFD 383 (636)
T ss_pred HHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEec--cccccceeeEeec
Confidence 877776666778999999999999999999999999999988877665 6888999999998
No 241
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.09 E-value=3e-08 Score=125.47 Aligned_cols=214 Identities=18% Similarity=0.159 Sum_probs=142.8
Q ss_pred eEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCc-EEEee---cCCeEEEEECCCCceeEEeeccccCCeEEEEE
Q psy8748 1757 MCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTT-LLTGS---GDMKIVTWNLETGQRIHEVAQAHIGDVVSISL 1832 (2004)
Q Consensus 1757 tIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~-LlSgS---~DGtI~IWDl~tg~~i~~il~~h~~~ItsLaf 1832 (2004)
.|.+||.+... .+.+..+...+....|++++. ++..+ .+..|++||+.+++... + ....+.+....|
T Consensus 180 ~l~~~d~dg~~-------~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~-l-~~~~~~~~~~~~ 250 (429)
T PRK03629 180 ELRVSDYDGYN-------QFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-V-ASFPRHNGAPAF 250 (429)
T ss_pred eEEEEcCCCCC-------CEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE-c-cCCCCCcCCeEE
Confidence 57777775432 122334556778889987664 44332 34579999998876432 1 223344567899
Q ss_pred CCCCCEEEEE-ECCC--eEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECC-Ce--EEEEEccCCceeEEEcC
Q psy8748 1833 SPDGQYFVTG-SVDK--SCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSED-KT--ARLFDIRADQQIATYLP 1906 (2004)
Q Consensus 1833 SPdg~~LaSG-S~DG--sIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~D-Gt--IrIWDLrtgk~i~t~~~ 1906 (2004)
+|||+.|+.. +.+| .|++||+.+++... +..+...+....|+|||+.|+..+.+ |. |.++|+.++... .+..
T Consensus 251 SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~-~lt~ 328 (429)
T PRK03629 251 SPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQ-RITW 328 (429)
T ss_pred CCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeE-Eeec
Confidence 9999988865 4455 59999998876543 44445567889999999988777654 44 555566665443 2221
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEeCC---CeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCe---EEEEE
Q psy8748 1907 PNKNSGFTSCAVSSSGRYIFCGSDD---NNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQF---VKVWQ 1980 (2004)
Q Consensus 1907 ~~~~s~ItsLafSPdG~~LaSGSsD---GsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGt---IrIWd 1980 (2004)
.........|+|||++|+..+.+ ..|++||+.+++.. .+.. ........|+|||++|+.++.|+. +.+|+
T Consensus 329 --~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~-~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~ 404 (429)
T PRK03629 329 --EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLTD-TFLDETPSIAPNGTMVIYSSSQGMGSVLNLVS 404 (429)
T ss_pred --CCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EeCC-CCCCCCceECCCCCEEEEEEcCCCceEEEEEE
Confidence 12334578899999999876543 35889999887644 3332 123456789999999999988764 77888
Q ss_pred CCCCe
Q psy8748 1981 ESNTI 1985 (2004)
Q Consensus 1981 lstg~ 1985 (2004)
++++.
T Consensus 405 ~~G~~ 409 (429)
T PRK03629 405 TDGRF 409 (429)
T ss_pred CCCCC
Confidence 86654
No 242
>KOG2041|consensus
Probab=99.09 E-value=8e-09 Score=127.80 Aligned_cols=285 Identities=14% Similarity=0.170 Sum_probs=205.8
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECCCCc---------------eEEEeeCCCCceEEEEEecCCCEEEEeecCCe
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGN---------------KTQVIPLRSAWVMSVAFAQSGNFVACGGMDNM 1757 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk---------------~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGt 1757 (2004)
....|++|+....|+|+||.||.++|..+.+.. .-+++.+|.+.|.-+.|+.+.+.|-+...+|.
T Consensus 15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~Gl 94 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTSGL 94 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCCce
Confidence 567899999999999999999999999765421 12356789999999999999999999999999
Q ss_pred EEEEEcCCCCCCCcceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCC
Q psy8748 1758 CTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDG 1836 (2004)
Q Consensus 1758 IrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg 1836 (2004)
|.||-+-++...... ......+.|.+++|. ++..+.....||.|.+=.++.++...+-+++ .....+.|++|.
T Consensus 95 IiVWmlykgsW~EEM----iNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGNRIwgKeLkg--~~l~hv~ws~D~ 168 (1189)
T KOG2041|consen 95 IIVWMLYKGSWCEEM----INNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGNRIWGKELKG--QLLAHVLWSEDL 168 (1189)
T ss_pred EEEEeeecccHHHHH----hhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccceecchhcch--heccceeecccH
Confidence 999998665321111 112235567788887 5666888888888887766544332222222 224578899999
Q ss_pred CEEEEEECCCeEEEEECCCC-------eEEEE----EecCCCCeEEEEEe--------CCCCEEEEEECCCeEEEEEccC
Q psy8748 1837 QYFVTGSVDKSCKLWDFREK-------KCVQT----FFGHEADVNSVCFH--------PSGLAFATGSEDKTARLFDIRA 1897 (2004)
Q Consensus 1837 ~~LaSGS~DGsIrIWDlrs~-------k~I~t----l~~h~s~ItsIafS--------Pdg~~LaSgS~DGtIrIWDLrt 1897 (2004)
+.++.+-..|.+.+||.... .+... +......|..+.|. |+...++++..+|.+.+..-.+
T Consensus 169 ~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eN 248 (1189)
T KOG2041|consen 169 EQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSEN 248 (1189)
T ss_pred HHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcC
Confidence 98888888999999997532 11111 11222346667764 4777899999999999887655
Q ss_pred CceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCC---------CeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEE
Q psy8748 1898 DQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDD---------NNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALV 1968 (2004)
Q Consensus 1898 gk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsD---------GsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~La 1968 (2004)
......+. ....+....|+++|..+++++.+ +.|++|. .-|+.+.+++.....|++++|-..|-.++
T Consensus 249 D~~Pvv~d---tgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fys-p~G~i~gtlkvpg~~It~lsWEg~gLriA 324 (1189)
T KOG2041|consen 249 DPEPVVVD---TGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYS-PYGHIVGTLKVPGSCITGLSWEGTGLRIA 324 (1189)
T ss_pred CCCCeEEe---cccEeecceecCCCcEEEEccCcccccCccccceEEEec-cchhheEEEecCCceeeeeEEcCCceEEE
Confidence 55444442 22568889999999999998754 3567776 46788888988889999999988777666
Q ss_pred EEECCCeEEEEECCCCeEEE
Q psy8748 1969 TSSWDQFVKVWQESNTIVWK 1988 (2004)
Q Consensus 1969 SgS~DGtIrIWdlstg~l~k 1988 (2004)
.+- |+.|++=++...-.|.
T Consensus 325 ~Av-dsfiyfanIRP~ykWg 343 (1189)
T KOG2041|consen 325 IAV-DSFIYFANIRPEYKWG 343 (1189)
T ss_pred EEe-cceEEEEeecccceEE
Confidence 654 7777777776655554
No 243
>KOG2314|consensus
Probab=99.08 E-value=1.5e-08 Score=123.79 Aligned_cols=282 Identities=15% Similarity=0.181 Sum_probs=175.6
Q ss_pred eEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeec-----------CCeEEEEEcC
Q psy8748 1696 NSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGM-----------DNMCTVYDLN 1764 (2004)
Q Consensus 1696 tsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~-----------DGtIrVWDl~ 1764 (2004)
+-+.|||.|.||+|-..-| |.+|--.+...++.+. |.+ |.-+.|||+.++|++-+. ...+.|||+.
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-Hp~-Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~ 290 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-HPG-VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA 290 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-CCC-ceeeecCCccceEEEecCCccccCcccCCCceEEEEEcc
Confidence 5689999999999998766 8899877766666665 544 889999999999998653 2579999999
Q ss_pred CCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEEC
Q psy8748 1765 NRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSV 1844 (2004)
Q Consensus 1765 t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~ 1844 (2004)
++.....+... .+....-.-..|+-++.+++.-....|.+|+..+-..+. ...-....|....|+|.++.||--+.
T Consensus 291 tG~lkrsF~~~---~~~~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld-~Kslki~gIr~FswsP~~~llAYwtp 366 (698)
T KOG2314|consen 291 TGLLKRSFPVI---KSPYLKWPIFRWSHDDKYFARMTGNSISIYETPSFMLLD-KKSLKISGIRDFSWSPTSNLLAYWTP 366 (698)
T ss_pred ccchhcceecc---CCCccccceEEeccCCceeEEeccceEEEEecCceeeec-ccccCCccccCcccCCCcceEEEEcc
Confidence 87544333332 122222334567766666665555778888865532221 11112234555666666555543221
Q ss_pred C---------------------------------------------------------CeEEEEECCCCeEEEEEecCCC
Q psy8748 1845 D---------------------------------------------------------KSCKLWDFREKKCVQTFFGHEA 1867 (2004)
Q Consensus 1845 D---------------------------------------------------------GsIrIWDlrs~k~I~tl~~h~s 1867 (2004)
. ..+.|+.++....-........
T Consensus 367 e~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~velke 446 (698)
T KOG2314|consen 367 ETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEVVELKE 446 (698)
T ss_pred cccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCceeeecch
Confidence 1 0122222221111111112345
Q ss_pred CeEEEEEeCCCCEEEEEEC---CCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEe---CCCeEEEEECCC
Q psy8748 1868 DVNSVCFHPSGLAFATGSE---DKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGS---DDNNVHVWDLLK 1941 (2004)
Q Consensus 1868 ~ItsIafSPdg~~LaSgS~---DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGS---sDGsIrIWDL~t 1941 (2004)
.|...+|-|.|+.+++-+. ..++.+|.+.+......+...-.....+.+.|+|.|++++++. ..|.+.++|+..
T Consensus 447 ~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~ 526 (698)
T KOG2314|consen 447 SVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDKKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDY 526 (698)
T ss_pred heeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcccccceEEEcCCCcEEEEEEecccccceEEEecch
Confidence 6778899999998877654 3468888877322111111111124567899999999998764 468899999875
Q ss_pred CeeeEEEccCCCCeEEEEEcCCCCEEEEEEC------CCeEEEEECCCC
Q psy8748 1942 TTHNGVLSGHENRVTSISLSPNGMALVTSSW------DQFVKVWQESNT 1984 (2004)
Q Consensus 1942 ge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~------DGtIrIWdlstg 1984 (2004)
..+..+-.......+.+.|.|.|+|+++++. |..-++|++.+.
T Consensus 527 a~~k~~~~~eh~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfqGr 575 (698)
T KOG2314|consen 527 ADLKDTASPEHFAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQGR 575 (698)
T ss_pred hhhhhccCccccccccceECCCCCEEEEeeehhhhccccceEEEEeecH
Confidence 4443333333345688999999999999875 445677776654
No 244
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.07 E-value=1e-07 Score=118.16 Aligned_cols=269 Identities=14% Similarity=0.119 Sum_probs=176.1
Q ss_pred CCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCcc
Q psy8748 1704 SRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEG 1783 (2004)
Q Consensus 1704 G~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~ 1783 (2004)
+..+++++.+|.+..+|..+|+.+.............. .++..+++++.+|.+..+|..+++...... . .+
T Consensus 65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W~~~------~-~~ 135 (377)
T TIGR03300 65 GGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELWRAK------L-SS 135 (377)
T ss_pred CCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceE--EcCCEEEEEcCCCEEEEEECCCCcEeeeec------c-Cc
Confidence 56788888899999999999999887765543222222 247788888899999999997764322111 1 11
Q ss_pred ceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccC----CeEEEEECCCCCEEEEEECCCeEEEEECCCCeEE
Q psy8748 1784 FLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIG----DVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCV 1859 (2004)
Q Consensus 1784 ~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~----~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I 1859 (2004)
.+.+.....++.++.++.+|.++.||.++|+.+.+....... ...+... .+..++.+..+|.+..+|.++++.+
T Consensus 136 ~~~~~p~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~--~~~~v~~~~~~g~v~ald~~tG~~~ 213 (377)
T TIGR03300 136 EVLSPPLVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVI--ADGGVLVGFAGGKLVALDLQTGQPL 213 (377)
T ss_pred eeecCCEEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEE--ECCEEEEECCCCEEEEEEccCCCEe
Confidence 122212224567888889999999999999877554221110 0011112 1346788888999999999999876
Q ss_pred EEEecCCC----C---eEEEEEeC--CCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeC
Q psy8748 1860 QTFFGHEA----D---VNSVCFHP--SGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSD 1930 (2004)
Q Consensus 1860 ~tl~~h~s----~---ItsIafSP--dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSs 1930 (2004)
........ . ...+.-+| .+..+++++.+|.++.||..+++......... ..... ..+..+++++.
T Consensus 214 W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~----~~~p~--~~~~~vyv~~~ 287 (377)
T TIGR03300 214 WEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDASS----YQGPA--VDDNRLYVTDA 287 (377)
T ss_pred eeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccCC----ccCce--EeCCEEEEECC
Confidence 54321100 0 00111111 34578888889999999999998877664221 11122 25678888889
Q ss_pred CCeEEEEECCCCeeeEEEccCCC-CeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEE
Q psy8748 1931 DNNVHVWDLLKTTHNGVLSGHEN-RVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLK 1991 (2004)
Q Consensus 1931 DGsIrIWDL~tge~l~tL~gHs~-~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik 1991 (2004)
+|.++.+|..+++.+........ ....... .+..+++++.||.|++||..+|+....++
T Consensus 288 ~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~ 347 (377)
T TIGR03300 288 DGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARLK 347 (377)
T ss_pred CCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEE
Confidence 99999999999988765532211 2222222 46689999999999999999887654444
No 245
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.07 E-value=1e-08 Score=129.72 Aligned_cols=223 Identities=15% Similarity=0.096 Sum_probs=143.5
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCC---CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEE-EeecCCeEEE
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLD---GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVA-CGGMDNMCTV 1760 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~D---GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~La-SGS~DGtIrV 1760 (2004)
.+.+..|.+.+.+.+|+|||+.|+..+.+ ..|++||+.+|+... +....+.+.+..|+|||+.++ +.+.+|...+
T Consensus 188 ~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~I 266 (427)
T PRK02889 188 AQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGNSQI 266 (427)
T ss_pred ceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCCceE
Confidence 34556788899999999999999877643 459999999887654 333345567899999999876 4677888777
Q ss_pred EEcCCCCCCCcceEEEEEecCccceeeeEEeCCCc-EEEee-cCCeEEEE--ECCCCceeEEeeccccCCeEEEEECCCC
Q psy8748 1761 YDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTT-LLTGS-GDMKIVTW--NLETGQRIHEVAQAHIGDVVSISLSPDG 1836 (2004)
Q Consensus 1761 WDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~-LlSgS-~DGtI~IW--Dl~tg~~i~~il~~h~~~ItsLafSPdg 1836 (2004)
|.++... .....+..+........|++++. ++..+ .+|...+| +..++... .+. .........+|+|+|
T Consensus 267 y~~d~~~-----~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~-~lt-~~g~~~~~~~~SpDG 339 (427)
T PRK02889 267 YTVNADG-----SGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQ-RVT-FTGSYNTSPRISPDG 339 (427)
T ss_pred EEEECCC-----CCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceE-EEe-cCCCCcCceEECCCC
Confidence 7765321 11233344444556677886654 55444 34555555 44554432 221 122334567899999
Q ss_pred CEEEEEECCC---eEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCC---eEEEEEccCCceeEEEcCCCCC
Q psy8748 1837 QYFVTGSVDK---SCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDK---TARLFDIRADQQIATYLPPNKN 1910 (2004)
Q Consensus 1837 ~~LaSGS~DG---sIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DG---tIrIWDLrtgk~i~t~~~~~~~ 1910 (2004)
++++..+.++ .|.+||+.+++... +.. ........|+|||+.++.++.++ .+.+.+.. +.....+. ...
T Consensus 340 ~~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~-~~~~~~p~~spdg~~l~~~~~~~g~~~l~~~~~~-g~~~~~l~--~~~ 414 (427)
T PRK02889 340 KLLAYISRVGGAFKLYVQDLATGQVTA-LTD-TTRDESPSFAPNGRYILYATQQGGRSVLAAVSSD-GRIKQRLS--VQG 414 (427)
T ss_pred CEEEEEEccCCcEEEEEEECCCCCeEE-ccC-CCCccCceECCCCCEEEEEEecCCCEEEEEEECC-CCceEEee--cCC
Confidence 9998877654 59999998876443 322 23346789999999988877544 35555663 44444442 222
Q ss_pred CCeEEEEEcC
Q psy8748 1911 SGFTSCAVSS 1920 (2004)
Q Consensus 1911 s~ItsLafSP 1920 (2004)
+.+...+|+|
T Consensus 415 g~~~~p~wsp 424 (427)
T PRK02889 415 GDVREPSWGP 424 (427)
T ss_pred CCCCCCccCC
Confidence 4456667776
No 246
>KOG2139|consensus
Probab=99.05 E-value=1.4e-08 Score=119.35 Aligned_cols=244 Identities=14% Similarity=0.171 Sum_probs=164.2
Q ss_pred CceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCC--CcEEEeecCCeEEEEECCC
Q psy8748 1735 AWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD--TTLLTGSGDMKIVTWNLET 1812 (2004)
Q Consensus 1735 ~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd--~~LlSgS~DGtI~IWDl~t 1812 (2004)
..+..++|++.-..++++..|..|++|+-... ... .-.......+++++|-+- ..+++|+. +.|++|....
T Consensus 99 ~dlr~~aWhqH~~~fava~nddvVriy~ksst----~pt--~Lks~sQrnvtclawRPlsaselavgCr-~gIciW~~s~ 171 (445)
T KOG2139|consen 99 IDLRGVAWHQHIIAFAVATNDDVVRIYDKSST----CPT--KLKSVSQRNVTCLAWRPLSASELAVGCR-AGICIWSDSR 171 (445)
T ss_pred cceeeEeechhhhhhhhhccCcEEEEeccCCC----CCc--eecchhhcceeEEEeccCCcceeeeeec-ceeEEEEcCc
Confidence 34778899998888899999999999987542 111 112234567899999853 34555555 5689997653
Q ss_pred CceeEE------------eeccccCCeEEEEECCCCCEEEEEEC-CCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCC
Q psy8748 1813 GQRIHE------------VAQAHIGDVVSISLSPDGQYFVTGSV-DKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGL 1879 (2004)
Q Consensus 1813 g~~i~~------------il~~h~~~ItsLafSPdg~~LaSGS~-DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~ 1879 (2004)
.-.... ........|+++.|.+||..+++++. |..|.|||..++..+.......+.+.-+.|+|||.
T Consensus 172 tln~~r~~~~~s~~~~qvl~~pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd 251 (445)
T KOG2139|consen 172 TLNANRNIRMMSTHHLQVLQDPGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGD 251 (445)
T ss_pred ccccccccccccccchhheeCCCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCC
Confidence 211100 11122367999999999999998874 56899999999887665545567788999999999
Q ss_pred EEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC----Ce-----------e
Q psy8748 1880 AFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLK----TT-----------H 1944 (2004)
Q Consensus 1880 ~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~t----ge-----------~ 1944 (2004)
++++++-|+..++|+............. .+.|...+|+|+|++|..... |.-++|.+.. +. .
T Consensus 252 ~lfaAt~davfrlw~e~q~wt~erw~lg--sgrvqtacWspcGsfLLf~~s-gsp~lysl~f~~~~~~~~~~~~~k~~ll 328 (445)
T KOG2139|consen 252 VLFAATCDAVFRLWQENQSWTKERWILG--SGRVQTACWSPCGSFLLFACS-GSPRLYSLTFDGEDSVFLRPQSIKRVLL 328 (445)
T ss_pred EEEEecccceeeeehhcccceecceecc--CCceeeeeecCCCCEEEEEEc-CCceEEEEeecCCCccccCcccceeeee
Confidence 9999999999999965433222222211 237899999999998776543 3344444321 00 0
Q ss_pred eEEEc-----c----CCCCeEEEEEcCCCCEEEEEECCC--------eEEEEECCCCeEEE
Q psy8748 1945 NGVLS-----G----HENRVTSISLSPNGMALVTSSWDQ--------FVKVWQESNTIVWK 1988 (2004)
Q Consensus 1945 l~tL~-----g----Hs~~VtsLaFSPDg~~LaSgS~DG--------tIrIWdlstg~l~k 1988 (2004)
+..+. . -.+++.+++|+|.|.+||+.-..+ .|.+||....-..+
T Consensus 329 iaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~ve 389 (445)
T KOG2139|consen 329 IADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVE 389 (445)
T ss_pred eccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceE
Confidence 00110 1 246789999999999999875433 46677776554433
No 247
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.04 E-value=5e-07 Score=123.17 Aligned_cols=290 Identities=13% Similarity=0.130 Sum_probs=183.9
Q ss_pred cccceeEEEEeCCCCEEEEEeC---C---CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeec---CCeEEEE
Q psy8748 1691 HINKVNSVHYSGDSRHCVSGSL---D---GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGM---DNMCTVY 1761 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~LASGS~---D---GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~---DGtIrVW 1761 (2004)
+.+.-..|+|-.||.|+|+.+- + ..++||+ +.|....+-..-.+--.+++|.|.|+++++... ...|.+|
T Consensus 208 ~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~-ReG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFf 286 (928)
T PF04762_consen 208 WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYS-REGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFF 286 (928)
T ss_pred cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEEC-CCceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEE
Confidence 5566778999999999998764 2 5799998 457655554444444567899999999998764 3566677
Q ss_pred EcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEe--eccccCCeEEEEECCC-CCE
Q psy8748 1762 DLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEV--AQAHIGDVVSISLSPD-GQY 1838 (2004)
Q Consensus 1762 Dl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~i--l~~h~~~ItsLafSPd-g~~ 1838 (2004)
.-+..+ .+............+..+.|+.++.+++......|.+|-..+-....+. .......+..+.|+|. ...
T Consensus 287 ErNGLr---hgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~ 363 (928)
T PF04762_consen 287 ERNGLR---HGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDRVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLR 363 (928)
T ss_pred ecCCcE---eeeEecCCCCCCceeeEEEECCCCCEEEEEecCCceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCE
Confidence 654321 1111112234566789999997777655555556999998876643222 2233344556999995 445
Q ss_pred EEEEECCCeEEEEECC----CC--------eEEEEEe-----------------------cCCCCeEEEEEeCCCCEEEE
Q psy8748 1839 FVTGSVDKSCKLWDFR----EK--------KCVQTFF-----------------------GHEADVNSVCFHPSGLAFAT 1883 (2004)
Q Consensus 1839 LaSGS~DGsIrIWDlr----s~--------k~I~tl~-----------------------~h~s~ItsIafSPdg~~LaS 1883 (2004)
|.+++.+|.+..+++. .+ ..+..+. ....+|.+++|++++..+++
T Consensus 364 L~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~av 443 (928)
T PF04762_consen 364 LHVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAV 443 (928)
T ss_pred EEEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEE
Confidence 7777776776655432 11 1111111 23567999999999988999
Q ss_pred EECCCeEEEEEccCCcee--------EEEcC--------CCCCCCeEEEEEcCCCCEEEEEeCC---CeEEEEECCCCe-
Q psy8748 1884 GSEDKTARLFDIRADQQI--------ATYLP--------PNKNSGFTSCAVSSSGRYIFCGSDD---NNVHVWDLLKTT- 1943 (2004)
Q Consensus 1884 gS~DGtIrIWDLrtgk~i--------~t~~~--------~~~~s~ItsLafSPdG~~LaSGSsD---GsIrIWDL~tge- 1943 (2004)
-..||.|.+|........ ..+.. ......+..++|..+...++..+.+ +.+.++++...+
T Consensus 444 l~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 523 (928)
T PF04762_consen 444 LTSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDIDDSEN 523 (928)
T ss_pred EECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEEEEEeccCCC
Confidence 999999999985432211 11111 1123457788888887777766654 678888874332
Q ss_pred --eeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1944 --HNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1944 --~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
.......-.+.+..+...++...++.-..||.+...+..+.
T Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~G~v~~~~~~~~ 566 (928)
T PF04762_consen 524 SASVESSTEVDGVVLIISSSPDSGSLYIQTNDGKVFQLSSDGE 566 (928)
T ss_pred ceeEEEEeccCceEEEEeeCCCCcEEEEEECCCEEEEeecCCC
Confidence 23333333555666666666555666677888886655543
No 248
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.03 E-value=7.8e-08 Score=120.39 Aligned_cols=232 Identities=17% Similarity=0.135 Sum_probs=152.4
Q ss_pred CCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecC---CeEEEEEcCCCCCCCcceEEEEEecCccceeeeE
Q psy8748 1713 DGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMD---NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCR 1789 (2004)
Q Consensus 1713 DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~D---GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssva 1789 (2004)
...|.++|.. +...+.+..+...+.+..|+|+|+.++.+..+ ..|++|++.++. . ..+..+........
T Consensus 169 ~~~l~~~d~~-g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~----~---~~~~~~~~~~~~~~ 240 (417)
T TIGR02800 169 RYELQVADYD-GANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQ----R---EKVASFPGMNGAPA 240 (417)
T ss_pred cceEEEEcCC-CCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCC----E---EEeecCCCCccceE
Confidence 3468888875 44445555566778999999999999887654 479999987642 1 12223344555677
Q ss_pred EeCCC-cEE-EeecC--CeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECC-C--eEEEEECCCCeEEEEE
Q psy8748 1790 FIDDT-TLL-TGSGD--MKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVD-K--SCKLWDFREKKCVQTF 1862 (2004)
Q Consensus 1790 fsdd~-~Ll-SgS~D--GtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~D-G--sIrIWDlrs~k~I~tl 1862 (2004)
|++++ .++ +.+.+ ..|++||+.++... .+ ..+........|+|+|+.++.++.. | .|+++|+.+++. ..+
T Consensus 241 ~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~-~l-~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~-~~l 317 (417)
T TIGR02800 241 FSPDGSKLAVSLSKDGNPDIYVMDLDGKQLT-RL-TNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV-RRL 317 (417)
T ss_pred ECCCCCEEEEEECCCCCccEEEEECCCCCEE-EC-CCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE-EEe
Confidence 88665 344 34444 36999999877643 22 2344445577899999988776643 3 588888877664 344
Q ss_pred ecCCCCeEEEEEeCCCCEEEEEECCC---eEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCC---eEEE
Q psy8748 1863 FGHEADVNSVCFHPSGLAFATGSEDK---TARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDN---NVHV 1936 (2004)
Q Consensus 1863 ~~h~s~ItsIafSPdg~~LaSgS~DG---tIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDG---sIrI 1936 (2004)
..+...+....|+|+|++++.++.++ .|.+||+.++... .+... .......|+|+|++|+.++.++ .+++
T Consensus 318 ~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~---~~~~~p~~spdg~~l~~~~~~~~~~~l~~ 393 (417)
T TIGR02800 318 TFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDT---GLDESPSFAPNGRMILYATTRGGRGVLGL 393 (417)
T ss_pred ecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccCC---CCCCCceECCCCCEEEEEEeCCCcEEEEE
Confidence 44556677889999999999888776 7999998875443 22211 1234568999999988877654 3555
Q ss_pred EECCCCeeeEEEccCCCCeEEEEE
Q psy8748 1937 WDLLKTTHNGVLSGHENRVTSISL 1960 (2004)
Q Consensus 1937 WDL~tge~l~tL~gHs~~VtsLaF 1960 (2004)
.+. ++.....+..+.+.+...+|
T Consensus 394 ~~~-~g~~~~~~~~~~g~~~~~~w 416 (417)
T TIGR02800 394 VST-DGRFRARLPLGNGDVREPAW 416 (417)
T ss_pred EEC-CCceeeECCCCCCCcCCCCC
Confidence 554 44445555444455555544
No 249
>KOG0974|consensus
Probab=99.01 E-value=6.7e-09 Score=134.76 Aligned_cols=275 Identities=15% Similarity=0.234 Sum_probs=187.2
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeC-CCCceE---EEEEecCCCEEEEeecCCeEEEEEcCCCC
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPL-RSAWVM---SVAFAQSGNFVACGGMDNMCTVYDLNNRD 1767 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~-Ht~~It---sLafSPdg~~LaSGS~DGtIrVWDl~t~~ 1767 (2004)
-+++++..+-. +||..|. .-.|.+||+..+..+..+.. +.-.+. ... .-.+..++++..-+.+..=+...
T Consensus 7 ~~~l~~~~~~~--~~llag~-gp~i~~yd~~s~~li~~~~~~~~~~~H~~e~~~-~l~~~~~v~~~~~~~v~~~~~~~-- 80 (967)
T KOG0974|consen 7 LGPLNLPQLVS--DYLLAGS-GPEILVYDLSSGCLIRHLIQSKILEVHRGEGKV-KLLSGKIVTCAKSDEVYVKEASN-- 80 (967)
T ss_pred cccccchhhcc--ceeeecC-CCceEEeeCCchhHhhhhhhhcccccccccccc-eeccceEEEEEeecceeecchhh--
Confidence 34555555543 5666553 45799999998876654321 111111 000 00133444444333333322211
Q ss_pred CCCcceEEEEEecCccceeeeEE-eCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeE---EEEECCCCCEEEEEE
Q psy8748 1768 STGAAKVIRELLGYEGFLSSCRF-IDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVV---SISLSPDGQYFVTGS 1843 (2004)
Q Consensus 1768 ~~~~~k~i~sl~gh~~~Vssvaf-sdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~It---sLafSPdg~~LaSGS 1843 (2004)
.. .....+.+....+ -.+..++.++.+..+.+||...+....++......... -+-++++.-++++|+
T Consensus 81 -----~~---~~~~s~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gs 152 (967)
T KOG0974|consen 81 -----QI---IERFSDWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGS 152 (967)
T ss_pred -----hh---hhhccccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEecc
Confidence 11 1111222222222 25567888999999999999887766555322221111 223455666899999
Q ss_pred CCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCC
Q psy8748 1844 VDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGR 1923 (2004)
Q Consensus 1844 ~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~ 1923 (2004)
.-|.|.+|+....+.-..+.+|++.|.++.|+-||.++++.|.|..+++|++.+.+... ...-+|...+..++|.|+
T Consensus 153 v~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~-~~~fgHsaRvw~~~~~~n-- 229 (967)
T KOG0974|consen 153 VFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG-CTGFGHSARVWACCFLPN-- 229 (967)
T ss_pred ccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccC-cccccccceeEEEEeccc--
Confidence 99999999987444334678999999999999999999999999999999999887765 222467788999999998
Q ss_pred EEEEEeCCCeEEEEECCCCeeeEEEccCCC-CeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1924 YIFCGSDDNNVHVWDLLKTTHNGVLSGHEN-RVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1924 ~LaSGSsDGsIrIWDL~tge~l~tL~gHs~-~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
.+++++.|.+.++|+. +++.+..+.+|.+ .|..++..++....+|++.||.+++|++.+.
T Consensus 230 ~i~t~gedctcrvW~~-~~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 230 RIITVGEDCTCRVWGV-NGTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGR 290 (967)
T ss_pred eeEEeccceEEEEEec-ccceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhcc
Confidence 9999999999999975 5555667777754 6999999999999999999999999998764
No 250
>KOG2315|consensus
Probab=99.01 E-value=1.3e-07 Score=116.82 Aligned_cols=251 Identities=16% Similarity=0.220 Sum_probs=163.6
Q ss_pred eEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCC--EEEE-----eecCCeEEEEEcCCCCC
Q psy8748 1696 NSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGN--FVAC-----GGMDNMCTVYDLNNRDS 1768 (2004)
Q Consensus 1696 tsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~--~LaS-----GS~DGtIrVWDl~t~~~ 1768 (2004)
++..|+.|..+.|=- ..+.+.+|+..+.+... -+.|...|..+.++|.+. .+++ +|.-+.+++|.+.....
T Consensus 129 W~~qfs~dEsl~arl-v~nev~f~~~~~f~~~~-~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~ 206 (566)
T KOG2315|consen 129 WVPQFSIDESLAARL-VSNEVQFYDLGSFKTIQ-HKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQ 206 (566)
T ss_pred cccccccchhhhhhh-hcceEEEEecCCcccee-eeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccc
Confidence 588899888754422 23579999987743322 244677899999998743 4443 45667899998863211
Q ss_pred CCcceEEEEEecCccceeeeEEeCCC--cEEEeec-----------CCeEEEEECCCCceeEEeeccccCCeEEEEECCC
Q psy8748 1769 TGAAKVIRELLGYEGFLSSCRFIDDT--TLLTGSG-----------DMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPD 1835 (2004)
Q Consensus 1769 ~~~~k~i~sl~gh~~~Vssvafsdd~--~LlSgS~-----------DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPd 1835 (2004)
. .....+.+. ...-..+.|...+ .|+.++. ..+++++++...... +.....++|.++.|+++
T Consensus 207 ~-~~~a~ksFF--kadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~--V~L~k~GPVhdv~W~~s 281 (566)
T KOG2315|consen 207 H-QPVANKSFF--KADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVS--VPLLKEGPVHDVTWSPS 281 (566)
T ss_pred c-chhhhcccc--ccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEE--EecCCCCCceEEEECCC
Confidence 1 111111111 1122234454322 2332222 246888888743443 22355789999999999
Q ss_pred CCEEEEE--ECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECC---CeEEEEEccCCceeEEEcCCCCC
Q psy8748 1836 GQYFVTG--SVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSED---KTARLFDIRADQQIATYLPPNKN 1910 (2004)
Q Consensus 1836 g~~LaSG--S~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~D---GtIrIWDLrtgk~i~t~~~~~~~ 1910 (2004)
++.|++. ..-..+.|||++ +.++..+ ..++=+++-|+|.|++++.+|-+ |.|.+||+.+.+++..+...
T Consensus 282 ~~EF~VvyGfMPAkvtifnlr-~~~v~df--~egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~--- 355 (566)
T KOG2315|consen 282 GREFAVVYGFMPAKVTIFNLR-GKPVFDF--PEGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAA--- 355 (566)
T ss_pred CCEEEEEEecccceEEEEcCC-CCEeEeC--CCCCccceEECCCCCEEEEeecCCCCCceEEEeccchhhccccccC---
Confidence 9876654 456689999986 4444444 46777899999999999888764 78999999998888777433
Q ss_pred CCeEEEEEcCCCCEEEEEeC------CCeEEEEECCCCeeeEEEccCCCCeEEEEEcC
Q psy8748 1911 SGFTSCAVSSSGRYIFCGSD------DNNVHVWDLLKTTHNGVLSGHENRVTSISLSP 1962 (2004)
Q Consensus 1911 s~ItsLafSPdG~~LaSGSs------DGsIrIWDL~tge~l~tL~gHs~~VtsLaFSP 1962 (2004)
..+-+.|+|||.++++++. |+.++||+. +|..+....-.. ....+.|-|
T Consensus 356 -~tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy-tG~~l~~~~f~s-EL~qv~W~P 410 (566)
T KOG2315|consen 356 -NTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY-TGSLLHEKMFKS-ELLQVEWRP 410 (566)
T ss_pred -CceEEEEcCCCcEEEEEeccccEEecCCeEEEEe-cCceeehhhhhH-hHhheeeee
Confidence 3578999999999999875 677999997 555544322111 566677765
No 251
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.01 E-value=7.8e-07 Score=109.64 Aligned_cols=267 Identities=15% Similarity=0.207 Sum_probs=168.7
Q ss_pred ceeEEEEeCCCCEEEEEeC----CCeEEEEECCCC--c--eEEEeeCCCCceEEEEEecCCCEEEEeec-CCeEEEEEcC
Q psy8748 1694 KVNSVHYSGDSRHCVSGSL----DGKLIIWDTWTG--N--KTQVIPLRSAWVMSVAFAQSGNFVACGGM-DNMCTVYDLN 1764 (2004)
Q Consensus 1694 ~VtsLaFSPDG~~LASGS~----DGtIrVWDl~Tg--k--~l~ti~~Ht~~ItsLafSPdg~~LaSGS~-DGtIrVWDl~ 1764 (2004)
....++++|++++|.++.. +|.|..|++... + .+............++++|++++++++.. +|.|.+++++
T Consensus 38 ~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~ 117 (345)
T PF10282_consen 38 NPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLD 117 (345)
T ss_dssp SECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEcc
Confidence 4457889999999988876 578999987654 3 33334434455678999999999988864 7999999998
Q ss_pred CCCCCCcceEEEEEe--------cCccceeeeEEeCCCc-EEEe-ecCCeEEEEECCCCc--ee--EEeeccccCCeEEE
Q psy8748 1765 NRDSTGAAKVIRELL--------GYEGFLSSCRFIDDTT-LLTG-SGDMKIVTWNLETGQ--RI--HEVAQAHIGDVVSI 1830 (2004)
Q Consensus 1765 t~~~~~~~k~i~sl~--------gh~~~Vssvafsdd~~-LlSg-S~DGtI~IWDl~tg~--~i--~~il~~h~~~ItsL 1830 (2004)
............... .......++.+.+++. +++. -....|.+|+++... .. ..+..........+
T Consensus 118 ~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~ 197 (345)
T PF10282_consen 118 DDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHL 197 (345)
T ss_dssp TTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEE
T ss_pred CCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEE
Confidence 642111111111110 1234556778886654 4443 345689999997665 21 12223455668899
Q ss_pred EECCCCCEEEEEE-CCCeEEEEECC--CCeE--EEEEecC------CCCeEEEEEeCCCCEEEEEEC-CCeEEEEEcc--
Q psy8748 1831 SLSPDGQYFVTGS-VDKSCKLWDFR--EKKC--VQTFFGH------EADVNSVCFHPSGLAFATGSE-DKTARLFDIR-- 1896 (2004)
Q Consensus 1831 afSPdg~~LaSGS-~DGsIrIWDlr--s~k~--I~tl~~h------~s~ItsIafSPdg~~LaSgS~-DGtIrIWDLr-- 1896 (2004)
+|+|+++++++.. .++.|.+|++. ++.. +..+... ......|+++|||++++++.. ++.|.+|++.
T Consensus 198 ~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~ 277 (345)
T PF10282_consen 198 AFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPA 277 (345)
T ss_dssp EE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTT
T ss_pred EEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecC
Confidence 9999999887765 46789999887 4432 2222211 125788999999999887764 5679999994
Q ss_pred CCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeC-CCeEEEEEC--CCCeeeEEEc-cCCCCeEEEEE
Q psy8748 1897 ADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSD-DNNVHVWDL--LKTTHNGVLS-GHENRVTSISL 1960 (2004)
Q Consensus 1897 tgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSs-DGsIrIWDL--~tge~l~tL~-gHs~~VtsLaF 1960 (2004)
+++....-...........++++|+|++|+++.. ++.|.+|++ .+|.....-. ..-....||.|
T Consensus 278 ~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 278 TGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp TTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred CCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence 2333221111222344789999999999998874 578999876 5666554432 23445666665
No 252
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.99 E-value=1.6e-07 Score=118.74 Aligned_cols=233 Identities=13% Similarity=0.058 Sum_probs=151.4
Q ss_pred eEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecC---CeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe
Q psy8748 1715 KLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMD---NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI 1791 (2004)
Q Consensus 1715 tIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~D---GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs 1791 (2004)
.|.++|...+ ..+.+..+...+....|+|||+.|+..+.+ ..|.+|++.++. .. .+....+......|+
T Consensus 180 ~l~~~d~~g~-~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~----~~---~l~~~~g~~~~~~~S 251 (430)
T PRK00178 180 TLQRSDYDGA-RAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGR----RE---QITNFEGLNGAPAWS 251 (430)
T ss_pred EEEEECCCCC-CceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCC----EE---EccCCCCCcCCeEEC
Confidence 5777887544 345555677789999999999998876544 368888987643 11 222233344567888
Q ss_pred CCC-cEE-EeecCC--eEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEEC-CC--eEEEEECCCCeEEEEEec
Q psy8748 1792 DDT-TLL-TGSGDM--KIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSV-DK--SCKLWDFREKKCVQTFFG 1864 (2004)
Q Consensus 1792 dd~-~Ll-SgS~DG--tI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~-DG--sIrIWDlrs~k~I~tl~~ 1864 (2004)
+++ .++ +...+| .|++||+.++... .+ ..+........|+|||+.++..+. +| .|+++|+.+++..... .
T Consensus 252 pDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~l-t~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt-~ 328 (430)
T PRK00178 252 PDGSKLAFVLSKDGNPEIYVMDLASRQLS-RV-TNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVT-F 328 (430)
T ss_pred CCCCEEEEEEccCCCceEEEEECCCCCeE-Ec-ccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee-c
Confidence 655 444 344444 6889999887654 22 334455667899999998877664 33 5888888777643322 2
Q ss_pred CCCCeEEEEEeCCCCEEEEEECC-C--eEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCC---CeEEEEE
Q psy8748 1865 HEADVNSVCFHPSGLAFATGSED-K--TARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDD---NNVHVWD 1938 (2004)
Q Consensus 1865 h~s~ItsIafSPdg~~LaSgS~D-G--tIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsD---GsIrIWD 1938 (2004)
.........|+|+|++++..+.+ | .|.+||+.+++... +.... ......|+|+|++++..+.+ +.+++++
T Consensus 329 ~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~~~-lt~~~---~~~~p~~spdg~~i~~~~~~~g~~~l~~~~ 404 (430)
T PRK00178 329 VGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSVRI-LTDTS---LDESPSVAPNGTMLIYATRQQGRGVLMLVS 404 (430)
T ss_pred CCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCEEE-ccCCC---CCCCceECCCCCEEEEEEecCCceEEEEEE
Confidence 22334457899999998877653 3 58889998776533 22111 12245899999999877654 3577778
Q ss_pred CCCCeeeEEEccCCCCeEEEEEcCC
Q psy8748 1939 LLKTTHNGVLSGHENRVTSISLSPN 1963 (2004)
Q Consensus 1939 L~tge~l~tL~gHs~~VtsLaFSPD 1963 (2004)
+. +.....+..+.+.+...+|+|-
T Consensus 405 ~~-g~~~~~l~~~~g~~~~p~ws~~ 428 (430)
T PRK00178 405 IN-GRVRLPLPTAQGEVREPSWSPY 428 (430)
T ss_pred CC-CCceEECcCCCCCcCCCccCCC
Confidence 74 4444455555667777888763
No 253
>KOG1064|consensus
Probab=98.99 E-value=1.3e-09 Score=145.33 Aligned_cols=201 Identities=19% Similarity=0.283 Sum_probs=164.6
Q ss_pred cccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeC-CCCceEEEEEecCCCEEEEeecCCeEEEEEcCC
Q psy8748 1687 SLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPL-RSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNN 1765 (2004)
Q Consensus 1687 sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~-Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t 1765 (2004)
.++.|-..|.++.=+|...+.+||+.||.|++|....++.+..+.. ....|+.+.|+.+|+.+..+..||.+.+|...
T Consensus 2203 ~~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~- 2281 (2439)
T KOG1064|consen 2203 MIKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS- 2281 (2439)
T ss_pred EeecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-
Confidence 3455677888998899999999999999999999999988877653 34789999999999999999999999999986
Q ss_pred CCCCCcceEEEEEecCccceeeeEEeCCCcEEEe---ecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEE
Q psy8748 1766 RDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTG---SGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTG 1842 (2004)
Q Consensus 1766 ~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSg---S~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSG 1842 (2004)
.+.......|........|.. ..++++ +.++.+.+||..-......+...|.+.++++++-|..+.|++|
T Consensus 2282 ------pk~~~s~qchnk~~~Df~Fi~-s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisg 2354 (2439)
T KOG1064|consen 2282 ------PKPYTSWQCHNKALSDFRFIG-SLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISG 2354 (2439)
T ss_pred ------CcceeccccCCccccceeeee-hhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEec
Confidence 245566677888888888876 444444 3578999999764433333347899999999999999999999
Q ss_pred ECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEc
Q psy8748 1843 SVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYL 1905 (2004)
Q Consensus 1843 S~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~ 1905 (2004)
|.+|.|++||++..+.++++.. ++ ...+|++|+..|.++||++.....+.++.
T Consensus 2355 gr~G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2355 GRKGEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred CCcCcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceEEEEccccchhhcCc
Confidence 9999999999998887766654 44 56689999999999999998877766663
No 254
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.99 E-value=1.2e-07 Score=117.74 Aligned_cols=263 Identities=19% Similarity=0.174 Sum_probs=168.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEE-EEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecC
Q psy8748 1703 DSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMS-VAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGY 1781 (2004)
Q Consensus 1703 DG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~Its-LafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh 1781 (2004)
++..++.++.+|.++.+|..+|+.+........ +.+ ... .+..++.++.+|.+..||.++++..............
T Consensus 104 ~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~~~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~ 180 (377)
T TIGR03300 104 DGGLVFVGTEKGEVIALDAEDGKELWRAKLSSE-VLSPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTL 180 (377)
T ss_pred cCCEEEEEcCCCEEEEEECCCCcEeeeeccCce-eecCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceee
Confidence 356788888899999999999999887654332 221 112 3556777888999999999876432221110000000
Q ss_pred ccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccC---C---eEEEEECC--CCCEEEEEECCCeEEEEEC
Q psy8748 1782 EGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIG---D---VVSISLSP--DGQYFVTGSVDKSCKLWDF 1853 (2004)
Q Consensus 1782 ~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~---~---ItsLafSP--dg~~LaSGS~DGsIrIWDl 1853 (2004)
... ..... .++.++++..+|.+..+|..+|+........... . ...+.-+| .+..+++++.+|.++.||.
T Consensus 181 ~~~-~sp~~-~~~~v~~~~~~g~v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~ 258 (377)
T TIGR03300 181 RGS-ASPVI-ADGGVLVGFAGGKLVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDL 258 (377)
T ss_pred cCC-CCCEE-ECCEEEEECCCCEEEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEEC
Confidence 000 11112 2356788888999999999999876543211110 0 00011111 3567888889999999999
Q ss_pred CCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCe
Q psy8748 1854 REKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNN 1933 (2004)
Q Consensus 1854 rs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGs 1933 (2004)
.+++.+...... ...... ..+..+++++.+|.+..+|..+++.+........ ........ .+..+++++.+|.
T Consensus 259 ~tG~~~W~~~~~--~~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~-~~~ssp~i--~g~~l~~~~~~G~ 331 (377)
T TIGR03300 259 RSGRVLWKRDAS--SYQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKNDELKY-RQLTAPAV--VGGYLVVGDFEGY 331 (377)
T ss_pred CCCcEEEeeccC--CccCce--EeCCEEEEECCCCeEEEEECCCCcEEEccccccC-CccccCEE--ECCEEEEEeCCCE
Confidence 999877655421 111222 2456788888999999999999988766522111 11222222 4678999999999
Q ss_pred EEEEECCCCeeeEEEccCCCCeEE-EEEcCCCCEEEEEECCCeEEEE
Q psy8748 1934 VHVWDLLKTTHNGVLSGHENRVTS-ISLSPNGMALVTSSWDQFVKVW 1979 (2004)
Q Consensus 1934 IrIWDL~tge~l~tL~gHs~~Vts-LaFSPDg~~LaSgS~DGtIrIW 1979 (2004)
|+++|..+++.+..+..+...+.. ..+. + ..|+.++.||.|+.|
T Consensus 332 l~~~d~~tG~~~~~~~~~~~~~~~sp~~~-~-~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 332 LHWLSREDGSFVARLKTDGSGIASPPVVV-G-DGLLVQTRDGDLYAF 376 (377)
T ss_pred EEEEECCCCCEEEEEEcCCCccccCCEEE-C-CEEEEEeCCceEEEe
Confidence 999999999999988866654332 2332 3 358899999998876
No 255
>KOG1354|consensus
Probab=98.99 E-value=4.5e-08 Score=114.49 Aligned_cols=231 Identities=19% Similarity=0.275 Sum_probs=146.1
Q ss_pred cceeEEEEeCCCC--EEEEEeCCCeEEEEECCCCceEE-Ee----eCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCC
Q psy8748 1693 NKVNSVHYSGDSR--HCVSGSLDGKLIIWDTWTGNKTQ-VI----PLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNN 1765 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~--~LASGS~DGtIrVWDl~Tgk~l~-ti----~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t 1765 (2004)
..|+.+.|.++++ .++..+.|.+|++|.+....... .. .+..+.|.++.. .+.+..+-.+
T Consensus 85 EKinkIrw~~~~n~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~------p~~~~~~~~v------- 151 (433)
T KOG1354|consen 85 EKINKIRWLDDGNLAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRL------PVEGRHDLEV------- 151 (433)
T ss_pred hhhhhceecCCCCccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeec------eeecccccee-------
Confidence 4677888887665 56677789999999876543222 00 111122222211 1111111100
Q ss_pred CCCCCcceEEEE-EecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeec-------cccCCeEEEEECC-CC
Q psy8748 1766 RDSTGAAKVIRE-LLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQ-------AHIGDVVSISLSP-DG 1836 (2004)
Q Consensus 1766 ~~~~~~~k~i~s-l~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~-------~h~~~ItsLafSP-dg 1836 (2004)
...+.+. -..|.-.+.++.+..+...+...+|-.|.+|+++-......+.. .-..-|++..||| ..
T Consensus 152 -----ea~prRv~aNaHtyhiNSIS~NsD~Et~lSADdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~c 226 (433)
T KOG1354|consen 152 -----EASPRRVYANAHTYHINSISVNSDKETFLSADDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHC 226 (433)
T ss_pred -----eeeeeeeccccceeEeeeeeecCccceEeeccceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHc
Confidence 1111111 23467778889998888878888899999999875443333321 1233588899999 46
Q ss_pred CEEEEEECCCeEEEEECCCCeE----EEEEe------------cCCCCeEEEEEeCCCCEEEEEECCCeEEEEEc-cCCc
Q psy8748 1837 QYFVTGSVDKSCKLWDFREKKC----VQTFF------------GHEADVNSVCFHPSGLAFATGSEDKTARLFDI-RADQ 1899 (2004)
Q Consensus 1837 ~~LaSGS~DGsIrIWDlrs~k~----I~tl~------------~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDL-rtgk 1899 (2004)
+.|+-.+..|+|++.|++.... .+.+. +--..|..+.|+++|+++++-.. -+|++||+ ...+
T Consensus 227 n~f~YSSSKGtIrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~ 305 (433)
T KOG1354|consen 227 NVFVYSSSKGTIRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAK 305 (433)
T ss_pred cEEEEecCCCcEEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCC
Confidence 7888888999999999984321 11111 12245788999999999987653 58999999 4455
Q ss_pred eeEEEcCCCC----------CCC---eEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Q psy8748 1900 QIATYLPPNK----------NSG---FTSCAVSSSGRYIFCGSDDNNVHVWDLLKT 1942 (2004)
Q Consensus 1900 ~i~t~~~~~~----------~s~---ItsLafSPdG~~LaSGSsDGsIrIWDL~tg 1942 (2004)
++.++..+.. ... -..++|+-++.++++|+....+++|++..|
T Consensus 306 pv~t~~vh~~lr~kLc~lYEnD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~~~g 361 (433)
T KOG1354|consen 306 PVETYPVHEYLRSKLCSLYENDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNLARG 361 (433)
T ss_pred cceEEeehHhHHHHHHHHhhccchhheeEEEEcCCcceEecccccceEEEecCCCC
Confidence 5555532221 111 245789999999999999999999996443
No 256
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.97 E-value=1.5e-07 Score=119.75 Aligned_cols=232 Identities=17% Similarity=0.138 Sum_probs=148.3
Q ss_pred eEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecC---CeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe
Q psy8748 1715 KLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMD---NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI 1791 (2004)
Q Consensus 1715 tIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~D---GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs 1791 (2004)
.|.++|..... .+.+..+...+.+..|+|||+.|+..+.+ ..|.+||+.+++ ...+ ....+......|+
T Consensus 199 ~l~i~d~dG~~-~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~----~~~l---t~~~g~~~~~~wS 270 (448)
T PRK04792 199 QLMIADYDGYN-EQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQV----REKV---TSFPGINGAPRFS 270 (448)
T ss_pred EEEEEeCCCCC-ceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCC----eEEe---cCCCCCcCCeeEC
Confidence 67777864433 34555567788999999999988876543 258888886542 1122 2222333456788
Q ss_pred CCCc-EE-EeecCC--eEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEEC-CC--eEEEEECCCCeEEEEEec
Q psy8748 1792 DDTT-LL-TGSGDM--KIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSV-DK--SCKLWDFREKKCVQTFFG 1864 (2004)
Q Consensus 1792 dd~~-Ll-SgS~DG--tI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~-DG--sIrIWDlrs~k~I~tl~~ 1864 (2004)
+++. ++ +.+.+| .|++||+.+++.. .+ ..+.......+|+|||+.++..+. +| .|+++|+.+++... +..
T Consensus 271 PDG~~La~~~~~~g~~~Iy~~dl~tg~~~-~l-t~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~ 347 (448)
T PRK04792 271 PDGKKLALVLSKDGQPEIYVVDIATKALT-RI-TRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSR-LTF 347 (448)
T ss_pred CCCCEEEEEEeCCCCeEEEEEECCCCCeE-EC-ccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEE-Eec
Confidence 6554 44 345556 4888898877653 22 234455677899999998877654 33 47777887776433 222
Q ss_pred CCCCeEEEEEeCCCCEEEEEEC-CC--eEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCC-C--eEEEEE
Q psy8748 1865 HEADVNSVCFHPSGLAFATGSE-DK--TARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDD-N--NVHVWD 1938 (2004)
Q Consensus 1865 h~s~ItsIafSPdg~~LaSgS~-DG--tIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsD-G--sIrIWD 1938 (2004)
........+|+|||++++..+. ++ .|.++|+.+++... +.... ......|+|+|++|+..+.+ | .+++++
T Consensus 348 ~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~~-lt~~~---~d~~ps~spdG~~I~~~~~~~g~~~l~~~~ 423 (448)
T PRK04792 348 EGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQV-LTSTR---LDESPSVAPNGTMVIYSTTYQGKQVLAAVS 423 (448)
T ss_pred CCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeEE-ccCCC---CCCCceECCCCCEEEEEEecCCceEEEEEE
Confidence 2233445789999999877655 34 45667877765432 22111 11244799999988776543 3 377788
Q ss_pred CCCCeeeEEEccCCCCeEEEEEcC
Q psy8748 1939 LLKTTHNGVLSGHENRVTSISLSP 1962 (2004)
Q Consensus 1939 L~tge~l~tL~gHs~~VtsLaFSP 1962 (2004)
. +|.....+..+.+.+...+|+|
T Consensus 424 ~-~G~~~~~l~~~~g~~~~p~Wsp 446 (448)
T PRK04792 424 I-DGRFKARLPAGQGEVKSPAWSP 446 (448)
T ss_pred C-CCCceEECcCCCCCcCCCccCC
Confidence 6 6666677766677788888887
No 257
>KOG2041|consensus
Probab=98.96 E-value=1.3e-07 Score=117.46 Aligned_cols=244 Identities=14% Similarity=0.184 Sum_probs=169.9
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe--eCCCCceEEEEEecCCCEEEEeecCCeEEEEE
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVI--PLRSAWVMSVAFAQSGNFVACGGMDNMCTVYD 1762 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti--~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWD 1762 (2004)
-.+|.||.+.|.-+.|+.+.+.|-|...+|.|.||-+-.|.-.... ....+.|.+++|..+|..++....||.|.|=.
T Consensus 64 NQtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGs 143 (1189)
T KOG2041|consen 64 NQTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGS 143 (1189)
T ss_pred hhhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEe
Confidence 4578999999999999999999999999999999998877654332 33567799999999999999999999998887
Q ss_pred cCCCCCCCcceEEEEEecCccceeeeEEeCCC-cEEEeecCCeEEEEECCCCc-------eeE---EeeccccCCeEEEE
Q psy8748 1763 LNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQ-------RIH---EVAQAHIGDVVSIS 1831 (2004)
Q Consensus 1763 l~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~-------~i~---~il~~h~~~ItsLa 1831 (2004)
++..+..+ +.+. ......+.|+.+. .++.+-.+|.+.+||....- +.. ..+......|..+.
T Consensus 144 vdGNRIwg-----KeLk--g~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~~~kia~i~ 216 (1189)
T KOG2041|consen 144 VDGNRIWG-----KELK--GQLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNFPTKIAEIE 216 (1189)
T ss_pred eccceecc-----hhcc--hheccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCCCcccccee
Confidence 76543111 1111 1223466777554 46777788999999976431 111 11222233466666
Q ss_pred EC--------CCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCC---------eEEEEE
Q psy8748 1832 LS--------PDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDK---------TARLFD 1894 (2004)
Q Consensus 1832 fS--------Pdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DG---------tIrIWD 1894 (2004)
|. |+...++++...|.+.|..-.+...-..+ .....+..+.|+++|..+++++.+. .|.+|.
T Consensus 217 w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~-dtgm~~vgakWnh~G~vLAvcG~~~da~~~~d~n~v~Fys 295 (1189)
T KOG2041|consen 217 WNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVV-DTGMKIVGAKWNHNGAVLAVCGNDSDADEPTDSNKVHFYS 295 (1189)
T ss_pred eccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEE-ecccEeecceecCCCcEEEEccCcccccCccccceEEEec
Confidence 64 47789999999999988765433222222 2347788999999999999988643 466665
Q ss_pred ccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy8748 1895 IRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLL 1940 (2004)
Q Consensus 1895 Lrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~ 1940 (2004)
.- |+...++..++ ..|+.++|-..|-.++.+ .|+.|++=+++
T Consensus 296 p~-G~i~gtlkvpg--~~It~lsWEg~gLriA~A-vdsfiyfanIR 337 (1189)
T KOG2041|consen 296 PY-GHIVGTLKVPG--SCITGLSWEGTGLRIAIA-VDSFIYFANIR 337 (1189)
T ss_pred cc-hhheEEEecCC--ceeeeeEEcCCceEEEEE-ecceEEEEeec
Confidence 43 66666665444 678999998877776665 45666655543
No 258
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=98.95 E-value=4.7e-08 Score=111.07 Aligned_cols=119 Identities=22% Similarity=0.393 Sum_probs=94.2
Q ss_pred cccCCeEEEEECCCCCEEEEE--ECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEEC---CCeEEEEEcc
Q psy8748 1822 AHIGDVVSISLSPDGQYFVTG--SVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSE---DKTARLFDIR 1896 (2004)
Q Consensus 1822 ~h~~~ItsLafSPdg~~LaSG--S~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~---DGtIrIWDLr 1896 (2004)
...++|.+++|+|+|+.|++. ..++.|.+||++ ++.+..+. ...++.+.|+|+|+++++++. .|.|.+||.+
T Consensus 57 ~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~ 133 (194)
T PF08662_consen 57 KKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVR 133 (194)
T ss_pred cCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECC
Confidence 345679999999999987654 356799999996 66666653 567889999999999999875 4679999999
Q ss_pred CCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeC------CCeEEEEECCCCeeeEEE
Q psy8748 1897 ADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSD------DNNVHVWDLLKTTHNGVL 1948 (2004)
Q Consensus 1897 tgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSs------DGsIrIWDL~tge~l~tL 1948 (2004)
+.+.+.... + ..++.++|+|+|+++++++. |+.++||+. .|+.+...
T Consensus 134 ~~~~i~~~~---~-~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~-~G~~l~~~ 186 (194)
T PF08662_consen 134 KKKKISTFE---H-SDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF-QGRLLYKK 186 (194)
T ss_pred CCEEeeccc---c-CcEEEEEEcCCCCEEEEEEeccceeccccEEEEEe-cCeEeEec
Confidence 888877653 2 34789999999999998875 678999997 46655443
No 259
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.92 E-value=2.9e-06 Score=104.23 Aligned_cols=263 Identities=14% Similarity=0.086 Sum_probs=167.0
Q ss_pred CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeec----------CCeEEEEEcCCCCCCCcceEEEEEecC--
Q psy8748 1714 GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGM----------DNMCTVYDLNNRDSTGAAKVIRELLGY-- 1781 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~----------DGtIrVWDl~t~~~~~~~k~i~sl~gh-- 1781 (2004)
++|.+.|..+++.+..+.....+- .+ ++||++.++++.. ++.|.+||..+.+ ....+.-.
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~------~~~~i~~p~~ 98 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHL------PIADIELPEG 98 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCc------EEeEEccCCC
Confidence 899999999999999887654443 34 9999998877665 7899999998753 33333221
Q ss_pred -----ccceeeeEEeCCC-cEEEee-c-CCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy8748 1782 -----EGFLSSCRFIDDT-TLLTGS-G-DMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDF 1853 (2004)
Q Consensus 1782 -----~~~Vssvafsdd~-~LlSgS-~-DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDl 1853 (2004)
........+++++ .+++.. . +..|.++|+.+++.+..+..+ +...-...+.+..+ +-+.||......+
T Consensus 99 p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp--~~~~vy~t~e~~~~--~~~~Dg~~~~v~~ 174 (352)
T TIGR02658 99 PRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVP--DCYHIFPTANDTFF--MHCRDGSLAKVGY 174 (352)
T ss_pred chhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCC--CCcEEEEecCCccE--EEeecCceEEEEe
Confidence 1222355566555 455444 3 789999999999988766432 22222222222222 2233554444333
Q ss_pred CC-CeE-EEE---EecCCCCeE-EEEEeC-CCCEEEEEECCCeEEEEEccCC-----ceeEEEcCC-----CCCCCeEEE
Q psy8748 1854 RE-KKC-VQT---FFGHEADVN-SVCFHP-SGLAFATGSEDKTARLFDIRAD-----QQIATYLPP-----NKNSGFTSC 1916 (2004)
Q Consensus 1854 rs-~k~-I~t---l~~h~s~It-sIafSP-dg~~LaSgS~DGtIrIWDLrtg-----k~i~t~~~~-----~~~s~ItsL 1916 (2004)
.+ ++. ... +.....++. .-.|.+ +|.++++... |+|.+.|+... .....+... -..+.+.-+
T Consensus 175 d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~i 253 (352)
T TIGR02658 175 GTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQV 253 (352)
T ss_pred cCCCceEEeeeeeecCCccccccCCceEcCCCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeE
Confidence 22 211 111 111011110 004455 8888877766 99999996432 222222111 122344559
Q ss_pred EEcCCCCEEEEEeC----------CCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCC-EEEEEE-CCCeEEEEECCCC
Q psy8748 1917 AVSSSGRYIFCGSD----------DNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGM-ALVTSS-WDQFVKVWQESNT 1984 (2004)
Q Consensus 1917 afSPdG~~LaSGSs----------DGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~-~LaSgS-~DGtIrIWdlstg 1984 (2004)
+++++|+.+++... .+.|.++|..+++.+..+.. ...+..++++||++ +|++.. .++.|.++|..++
T Consensus 254 a~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~ 332 (352)
T TIGR02658 254 AYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETG 332 (352)
T ss_pred EEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCC
Confidence 99999999888532 25799999999999998864 46899999999999 887666 5788999999999
Q ss_pred eEEEEE
Q psy8748 1985 IVWKVL 1990 (2004)
Q Consensus 1985 ~l~k~I 1990 (2004)
+..+.+
T Consensus 333 k~i~~i 338 (352)
T TIGR02658 333 KELSSV 338 (352)
T ss_pred eEEeee
Confidence 776665
No 260
>KOG4190|consensus
Probab=98.91 E-value=3.7e-09 Score=127.36 Aligned_cols=288 Identities=14% Similarity=0.169 Sum_probs=199.3
Q ss_pred cccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCC-------CceEEEeeCCCCceEEEEEecCCCEEEEeecC
Q psy8748 1683 MPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWT-------GNKTQVIPLRSAWVMSVAFAQSGNFVACGGMD 1755 (2004)
Q Consensus 1683 ~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~T-------gk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~D 1755 (2004)
.....+.||+..|+.++--.+.+-+++++.|++|++|.++. ..+..++..|+.+|.++.|-.+.++++++ |
T Consensus 726 irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc--D 803 (1034)
T KOG4190|consen 726 IRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC--D 803 (1034)
T ss_pred eeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec--c
Confidence 34567899999999998888888999999999999998753 34667888999999999999888887765 7
Q ss_pred CeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEe-ecCCeEEEEECCCCceeEEee----ccccCCeEEE
Q psy8748 1756 NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTG-SGDMKIVTWNLETGQRIHEVA----QAHIGDVVSI 1830 (2004)
Q Consensus 1756 GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSg-S~DGtI~IWDl~tg~~i~~il----~~h~~~ItsL 1830 (2004)
|.|.+||.-.+........ ....+..+.+.++.-.+...+++| +...+|+++|.+.+....... .+..+.+.++
T Consensus 804 ~giHlWDPFigr~Laq~~d-apk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~i 882 (1034)
T KOG4190|consen 804 GGIHLWDPFIGRLLAQMED-APKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAI 882 (1034)
T ss_pred CcceeecccccchhHhhhc-CcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEE
Confidence 8899999754322111110 111223344555544444555555 678999999999887654442 3344668999
Q ss_pred EECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEE-EEccCCceeEEEcCCCC
Q psy8748 1831 SLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARL-FDIRADQQIATYLPPNK 1909 (2004)
Q Consensus 1831 afSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrI-WDLrtgk~i~t~~~~~~ 1909 (2004)
++.+.|++++++-..|.|.+.|.++|+.+..++..+.....++- |..+.++....|.++.+ |-.-.+.......++..
T Consensus 883 aVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaa-psdq~L~~saldHslaVnWhaldgimh~q~kpppe 961 (1034)
T KOG4190|consen 883 AVADKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAA-PSDQALAQSALDHSLAVNWHALDGIMHLQDKPPPE 961 (1034)
T ss_pred EeccCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcC-chhHHHHhhcccceeEeeehhcCCeeeeccCCCCc
Confidence 99999999999999999999999999999888776666555543 55567777777888888 87665554444433222
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECC-C---CeeeEEEc--cCCCCeEEEEEcCCCCEEEEEECCCeEEE
Q psy8748 1910 NSGFTSCAVSSSGRYIFCGSDDNNVHVWDLL-K---TTHNGVLS--GHENRVTSISLSPNGMALVTSSWDQFVKV 1978 (2004)
Q Consensus 1910 ~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~-t---ge~l~tL~--gHs~~VtsLaFSPDg~~LaSgS~DGtIrI 1978 (2004)
.. .. .-.-|.-++++.....+.+|--. . ...+.+++ ...+..++++.-|-..-+..|+..|.|.+
T Consensus 962 pa--hf--lqsvgpSLV~a~~Gn~lgVYad~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen 962 PA--HF--LQSVGPSLVTAQNGNILGVYADSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGNEHGAIAL 1032 (1034)
T ss_pred ch--hh--hhccCceeEEeccCcEEEEEecchhhhhhhhhccccccccCCccceeeeccccchhhccCCCCceee
Confidence 11 11 11135566766666667777421 1 11112222 23466788888887777888888888875
No 261
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.90 E-value=6.1e-07 Score=112.41 Aligned_cols=213 Identities=19% Similarity=0.149 Sum_probs=140.2
Q ss_pred eEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCc-EEEeecC---CeEEEEECCCCceeEEeeccccCCeEEEEE
Q psy8748 1757 MCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTT-LLTGSGD---MKIVTWNLETGQRIHEVAQAHIGDVVSISL 1832 (2004)
Q Consensus 1757 tIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~-LlSgS~D---GtI~IWDl~tg~~i~~il~~h~~~ItsLaf 1832 (2004)
.|.++|.+.. ..+.+..+...+....|++++. ++.+..+ ..|++||+.+++.... ..+.+.+.+++|
T Consensus 171 ~l~~~d~~g~-------~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~--~~~~~~~~~~~~ 241 (417)
T TIGR02800 171 ELQVADYDGA-------NPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKV--ASFPGMNGAPAF 241 (417)
T ss_pred eEEEEcCCCC-------CCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEe--ecCCCCccceEE
Confidence 4666666432 1233444555667777886654 5544432 5799999998865422 234556778999
Q ss_pred CCCCCEEEEE-ECCC--eEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECC-C--eEEEEEccCCceeEEEcC
Q psy8748 1833 SPDGQYFVTG-SVDK--SCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSED-K--TARLFDIRADQQIATYLP 1906 (2004)
Q Consensus 1833 SPdg~~LaSG-S~DG--sIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~D-G--tIrIWDLrtgk~i~t~~~ 1906 (2004)
+|+|+.|+.. +.+| .|++||+.++.. ..+..+........|+|+|+.++..+.. | .|+++|+.+++.....
T Consensus 242 spDg~~l~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~-- 318 (417)
T TIGR02800 242 SPDGSKLAVSLSKDGNPDIYVMDLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLT-- 318 (417)
T ss_pred CCCCCEEEEEECCCCCccEEEEECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee--
Confidence 9999977654 4444 589999987754 3344444555677899999988766543 3 5888888766543222
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEeCCC---eEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCC---eEEEEE
Q psy8748 1907 PNKNSGFTSCAVSSSGRYIFCGSDDN---NVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQ---FVKVWQ 1980 (2004)
Q Consensus 1907 ~~~~s~ItsLafSPdG~~LaSGSsDG---sIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DG---tIrIWd 1980 (2004)
..........|+|+|++++.++.++ .|.+||+.++... .+..+ .......|+|||++|+.++.++ .+++.+
T Consensus 319 -~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~-~~~~~p~~spdg~~l~~~~~~~~~~~l~~~~ 395 (417)
T TIGR02800 319 -FRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGER-VLTDT-GLDESPSFAPNGRMILYATTRGGRGVLGLVS 395 (417)
T ss_pred -cCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCeE-EccCC-CCCCCceECCCCCEEEEEEeCCCcEEEEEEE
Confidence 1224466789999999999888776 7999998876543 23222 2345668999999988877654 466666
Q ss_pred CCCC
Q psy8748 1981 ESNT 1984 (2004)
Q Consensus 1981 lstg 1984 (2004)
.++.
T Consensus 396 ~~g~ 399 (417)
T TIGR02800 396 TDGR 399 (417)
T ss_pred CCCc
Confidence 5554
No 262
>KOG4547|consensus
Probab=98.88 E-value=1.2e-07 Score=117.84 Aligned_cols=187 Identities=17% Similarity=0.227 Sum_probs=151.6
Q ss_pred CCcEEEeecCCeEEEEECCCCceeEEeec--cccCCeEEEEEC------C--------------CCCEEEEEECCCeEEE
Q psy8748 1793 DTTLLTGSGDMKIVTWNLETGQRIHEVAQ--AHIGDVVSISLS------P--------------DGQYFVTGSVDKSCKL 1850 (2004)
Q Consensus 1793 d~~LlSgS~DGtI~IWDl~tg~~i~~il~--~h~~~ItsLafS------P--------------dg~~LaSGS~DGsIrI 1850 (2004)
..+++..+.||.+++||...++....+.. ...+..++..|. | +...++-|...|.|.+
T Consensus 5 ~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~v~~ 84 (541)
T KOG4547|consen 5 LDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGSVLL 84 (541)
T ss_pred hheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCccEEE
Confidence 34688889999999999998887655522 123334444442 1 3346788889999999
Q ss_pred EECCCCeEEEEEe--cCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEE
Q psy8748 1851 WDFREKKCVQTFF--GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCG 1928 (2004)
Q Consensus 1851 WDlrs~k~I~tl~--~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSG 1928 (2004)
|+...++....+. .|.+.|.++.++.+-..|.+++.|+.+..|+....+.+..+... ...+.+++++|||..++++
T Consensus 85 ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~--~~~~~sl~is~D~~~l~~a 162 (541)
T KOG4547|consen 85 YSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQ--KPLVSSLCISPDGKILLTA 162 (541)
T ss_pred EEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccC--CCccceEEEcCCCCEEEec
Confidence 9999999877775 68899999999999889999999999999999999888888543 3568899999999999988
Q ss_pred eCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCC-----CCEEEE-EECCCeEEEEECCC
Q psy8748 1929 SDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPN-----GMALVT-SSWDQFVKVWQESN 1983 (2004)
Q Consensus 1929 SsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPD-----g~~LaS-gS~DGtIrIWdlst 1983 (2004)
+ ++|++||+++++.+.++.||.++|.+++|..+ |.++.+ ...+..+.+|-+..
T Consensus 163 s--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 163 S--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred c--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 5 68999999999999999999999999999876 666555 45567788998765
No 263
>KOG0280|consensus
Probab=98.88 E-value=8.3e-08 Score=110.79 Aligned_cols=265 Identities=16% Similarity=0.136 Sum_probs=175.1
Q ss_pred CCeEEEEECCCCceEE---EeeCCCCceEEEEEec---CCC-EEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCcc--
Q psy8748 1713 DGKLIIWDTWTGNKTQ---VIPLRSAWVMSVAFAQ---SGN-FVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEG-- 1783 (2004)
Q Consensus 1713 DGtIrVWDl~Tgk~l~---ti~~Ht~~ItsLafSP---dg~-~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~-- 1783 (2004)
-|.+.++++.+.+... .....+..+..+.|.. +|. .++-+..+|.|.++..+..... -..+.+....-
T Consensus 45 ~Gkl~Lys~~d~~~~~l~~~q~~dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss---~~L~~ls~~ki~~ 121 (339)
T KOG0280|consen 45 SGKLHLYSLEDMKLSPLDTLQCTDTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESS---VHLRGLSSKKISV 121 (339)
T ss_pred ccceEEEeecccccCccceeeeecccccceeeeeeccCCccceeeeccccceEEEEeeccceee---eeecccchhhhhh
Confidence 3678888877655443 1223445677888864 455 5667778899999987653211 11111111111
Q ss_pred -ceeeeEEeC-CCcEEEeecCCeEEEEECCCCceeE-EeeccccCCeEEEEECC-CCCEEEEEECCCeEEEEECC-CCeE
Q psy8748 1784 -FLSSCRFID-DTTLLTGSGDMKIVTWNLETGQRIH-EVAQAHIGDVVSISLSP-DGQYFVTGSVDKSCKLWDFR-EKKC 1858 (2004)
Q Consensus 1784 -~Vssvafsd-d~~LlSgS~DGtI~IWDl~tg~~i~-~il~~h~~~ItsLafSP-dg~~LaSGS~DGsIrIWDlr-s~k~ 1858 (2004)
...++.|.. +..++++..+|.+.+.+........ ...+.|..+++...|+. +.+.+++|+.||.+..||++ .++.
T Consensus 122 ~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~ 201 (339)
T KOG0280|consen 122 VEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTF 201 (339)
T ss_pred eeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcce
Confidence 123445553 3458888889999866655443321 24678999999999986 45689999999999999999 3444
Q ss_pred EEE-EecCCCCeEEEEEeC-CCCEEEEEECCCeEEEEEccC-CceeEEEcCCCCCCCeEEEEEcCC--CCEEEEEeCCCe
Q psy8748 1859 VQT-FFGHEADVNSVCFHP-SGLAFATGSEDKTARLFDIRA-DQQIATYLPPNKNSGFTSCAVSSS--GRYIFCGSDDNN 1933 (2004)
Q Consensus 1859 I~t-l~~h~s~ItsIafSP-dg~~LaSgS~DGtIrIWDLrt-gk~i~t~~~~~~~s~ItsLafSPd--G~~LaSGSsDGs 1933 (2004)
+.. .+.|...|.+|.-+| .+.++++|+.|..|++||.++ ++++..- ...++|..+.++|. ++.++++..+|
T Consensus 202 i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~---~v~GGVWRi~~~p~~~~~lL~~CMh~G- 277 (339)
T KOG0280|consen 202 IWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKA---KVGGGVWRIKHHPEIFHRLLAACMHNG- 277 (339)
T ss_pred eeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccC---ccccceEEEEecchhhhHHHHHHHhcC-
Confidence 433 456888999998887 577999999999999999985 4444332 34478999999994 34555555555
Q ss_pred EEEEECCCC--e---eeEEEccCCCCeEEEEEcCCCCEEEEEE-CCCeEE-EEECCCC
Q psy8748 1934 VHVWDLLKT--T---HNGVLSGHENRVTSISLSPNGMALVTSS-WDQFVK-VWQESNT 1984 (2004)
Q Consensus 1934 IrIWDL~tg--e---~l~tL~gHs~~VtsLaFSPDg~~LaSgS-~DGtIr-IWdlstg 1984 (2004)
.+|-+...+ + .....+.|.+-+..-.|......|+||+ .|+.++ +|-.-++
T Consensus 278 ~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~~t~ 335 (339)
T KOG0280|consen 278 AKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLWLHITG 335 (339)
T ss_pred ceEEEecccccchheeeeccccccceeeccccccccceeeeeeccccceeeeeeeccC
Confidence 666666443 2 3344566777777777755556788875 466644 6654443
No 264
>KOG0309|consensus
Probab=98.85 E-value=1.8e-08 Score=125.53 Aligned_cols=289 Identities=18% Similarity=0.205 Sum_probs=202.7
Q ss_pred cccceeEEEEeCCCCEEEEEeCCCeEEEEECCCC-ceEEEee-CCCCceEEEEEecC--CCEEEEeecCCeEEEEEcCCC
Q psy8748 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTG-NKTQVIP-LRSAWVMSVAFAQS--GNFVACGGMDNMCTVYDLNNR 1766 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tg-k~l~ti~-~Ht~~ItsLafSPd--g~~LaSGS~DGtIrVWDl~t~ 1766 (2004)
-.+++..+..+|.|+-+|.++.-| +.+-|+... ...+-+. ...-.|-...|++. ..+-++......-.+|++...
T Consensus 23 v~~~~~a~si~p~grdi~lAsr~g-l~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~s 101 (1081)
T KOG0309|consen 23 VDGGFNAVSINPSGRDIVLASRQG-LYIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKS 101 (1081)
T ss_pred ecCcccceeeccccchhhhhhhcC-eEEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhcC
Confidence 346888999999999999998876 556666543 3332222 22234667788775 345666666666789998654
Q ss_pred CCCCcceEEEEEecCccceeeeEEeCCC--cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEEC
Q psy8748 1767 DSTGAAKVIRELLGYEGFLSSCRFIDDT--TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSV 1844 (2004)
Q Consensus 1767 ~~~~~~k~i~sl~gh~~~Vssvafsdd~--~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~ 1844 (2004)
. ...+...+.+|...++.+.|.+.. .+++++.|..+..||+++...............+.++|+.....+.+.+.
T Consensus 102 s---~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlassh 178 (1081)
T KOG0309|consen 102 S---SNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSH 178 (1081)
T ss_pred C---ccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhcc
Confidence 3 334555678899999999998654 58889999999999999887665555555667788999986666777777
Q ss_pred CCeEEEEECCCC-eEEEEEecCCCCeEEEEEeC-CCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCC
Q psy8748 1845 DKSCKLWDFREK-KCVQTFFGHEADVNSVCFHP-SGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSG 1922 (2004)
Q Consensus 1845 DGsIrIWDlrs~-k~I~tl~~h~s~ItsIafSP-dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG 1922 (2004)
.+.|++||.+.+ .++..+++|...|+.++|.. ....+++++.||+|+.||............ ....++..-.+-|-|
T Consensus 179 g~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~v-tt~~piw~~r~~Pfg 257 (1081)
T KOG0309|consen 179 GNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTV-TTNFPIWRGRYLPFG 257 (1081)
T ss_pred CCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceec-cccCcceeccccccC
Confidence 889999999865 46778888988999998876 334688899999999999875544333221 223455555666633
Q ss_pred C--EEEEEeCCCeEEEE---------ECC-CCeeeEEEccCCCCeEEEEEcCCC----------CEEEEEECCCeEEEEE
Q psy8748 1923 R--YIFCGSDDNNVHVW---------DLL-KTTHNGVLSGHENRVTSISLSPNG----------MALVTSSWDQFVKVWQ 1980 (2004)
Q Consensus 1923 ~--~LaSGSsDGsIrIW---------DL~-tge~l~tL~gHs~~VtsLaFSPDg----------~~LaSgS~DGtIrIWd 1980 (2004)
. ++.---.+..+.++ +.. ..+++..+.||.+.|...-|-..+ -.|+|-+.|..+++|-
T Consensus 258 ~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWp 337 (1081)
T KOG0309|consen 258 EGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWP 337 (1081)
T ss_pred ceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeee
Confidence 2 22211122234443 332 246789999999999888774321 2599999999999999
Q ss_pred CCCC
Q psy8748 1981 ESNT 1984 (2004)
Q Consensus 1981 lstg 1984 (2004)
+.+.
T Consensus 338 I~~~ 341 (1081)
T KOG0309|consen 338 IDSQ 341 (1081)
T ss_pred ccHH
Confidence 8764
No 265
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.82 E-value=4.2e-06 Score=101.24 Aligned_cols=122 Identities=12% Similarity=0.141 Sum_probs=100.6
Q ss_pred CCCCeEEEEEeCCCCEEEEEECCC-eEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Q psy8748 1865 HEADVNSVCFHPSGLAFATGSEDK-TARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTT 1943 (2004)
Q Consensus 1865 h~s~ItsIafSPdg~~LaSgS~DG-tIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge 1943 (2004)
+...|.-..+..+++-++.|..|| .+-|||.++++..... ..-+.|.++..+++|++++++.....|.++|+.++.
T Consensus 358 ~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~kr~e---~~lg~I~av~vs~dGK~~vvaNdr~el~vididngn 434 (668)
T COG4946 358 KKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEVKRIE---KDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGN 434 (668)
T ss_pred CCCceEEEEEccCCcceEEeccCCceEEEEecCCceEEEee---CCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCC
Confidence 445566666666777888899999 8999999877654433 334679999999999999999999999999999998
Q ss_pred eeEEEccCCCCeEEEEEcCCCCEEEEEECCC----eEEEEECCCCeEEEE
Q psy8748 1944 HNGVLSGHENRVTSISLSPNGMALVTSSWDQ----FVKVWQESNTIVWKV 1989 (2004)
Q Consensus 1944 ~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DG----tIrIWdlstg~l~k~ 1989 (2004)
....-+...+-|+.++|||+++++|-+--+| .|+++|+.+++....
T Consensus 435 v~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~v 484 (668)
T COG4946 435 VRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDV 484 (668)
T ss_pred eeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEe
Confidence 8777777788899999999999999886665 699999999876553
No 266
>KOG1409|consensus
Probab=98.81 E-value=4e-07 Score=106.93 Aligned_cols=196 Identities=17% Similarity=0.264 Sum_probs=142.8
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECC----CCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCC
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTW----TGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDS 1768 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~----Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~ 1768 (2004)
.+++++.+.++...|+.|-..|++.-+.+. .....+....|...|..+-|+-....+++.+.|..+.---.+.+..
T Consensus 69 ~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~ 148 (404)
T KOG1409|consen 69 SPCSAMEYVSESRRLYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNR 148 (404)
T ss_pred CCceEeeeeccceEEEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCc
Confidence 478899999999999999999999988654 3445566678999999999999899999999887654333333221
Q ss_pred CCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCc-eeEEeeccccCCeEEEEECCCCCEEEEEECCCe
Q psy8748 1769 TGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQ-RIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKS 1847 (2004)
Q Consensus 1769 ~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~-~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGs 1847 (2004)
.+..... ...++..+.-. ..+.|...|.|....+.... .....+.+|.+.+.+++|.+....+.+|..|..
T Consensus 149 lg~Y~~~-------~~~t~~~~d~~-~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~ 220 (404)
T KOG1409|consen 149 LGGYNFE-------TPASALQFDAL-YAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHS 220 (404)
T ss_pred ccceEee-------ccCCCCceeeE-EEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCc
Confidence 1111100 01111111111 45566667777666554322 233456899999999999999999999999999
Q ss_pred EEEEECCCCe-EEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEcc
Q psy8748 1848 CKLWDFREKK-CVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIR 1896 (2004)
Q Consensus 1848 IrIWDlrs~k-~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLr 1896 (2004)
+.+||+.-++ ......+|...|..+...+--..+++++.||.|.+||++
T Consensus 221 vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 221 VIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred eEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence 9999987543 345667899999999888888889999999999999985
No 267
>KOG4547|consensus
Probab=98.81 E-value=3.8e-07 Score=113.47 Aligned_cols=191 Identities=17% Similarity=0.308 Sum_probs=152.0
Q ss_pred cCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe---------------------CCCcEEEeecC
Q psy8748 1744 QSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI---------------------DDTTLLTGSGD 1802 (2004)
Q Consensus 1744 Pdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs---------------------dd~~LlSgS~D 1802 (2004)
|...+++....||.+++|+...++....+...... .+...+..|. +...++-|...
T Consensus 3 ~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~---s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~ 79 (541)
T KOG4547|consen 3 PALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASL---SGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQ 79 (541)
T ss_pred chhheEeecCCCCeEEEEEccCceeeeeeccchhc---cCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCC
Confidence 44678999999999999999876433222222222 2223333331 22347789999
Q ss_pred CeEEEEECCCCceeEEee-ccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEE
Q psy8748 1803 MKIVTWNLETGQRIHEVA-QAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAF 1881 (2004)
Q Consensus 1803 GtI~IWDl~tg~~i~~il-~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~L 1881 (2004)
|.|.+|+...|+...++. ..|.+.|.++.++.+-.+|.+++.|+.+..|+....+.++.+.+....+.+++.+|||..+
T Consensus 80 g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l 159 (541)
T KOG4547|consen 80 GSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKIL 159 (541)
T ss_pred ccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEE
Confidence 999999999999877765 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCC-----CCEEEEEeC-CCeEEEEECCC
Q psy8748 1882 ATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSS-----GRYIFCGSD-DNNVHVWDLLK 1941 (2004)
Q Consensus 1882 aSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPd-----G~~LaSGSs-DGsIrIWDL~t 1941 (2004)
++++ +.|++||+.+++.+.+| .+|.+.|.+++|..+ |.++.++.. +..+.+|-+..
T Consensus 160 ~~as--~~ik~~~~~~kevv~~f--tgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 160 LTAS--RQIKVLDIETKEVVITF--TGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred Eecc--ceEEEEEccCceEEEEe--cCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 9886 68999999999999998 577799999999887 777776543 44577776543
No 268
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.80 E-value=8.8e-07 Score=112.04 Aligned_cols=221 Identities=16% Similarity=0.106 Sum_probs=140.3
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCC---CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEE-eecCC--eE
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLD---GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVAC-GGMDN--MC 1758 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~D---GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaS-GS~DG--tI 1758 (2004)
.+.+..|...+...+|+|||+.|+..+.+ ..|.+||+.+++... +....+.+....|+|||+.++. ...+| .|
T Consensus 191 ~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~I 269 (430)
T PRK00178 191 AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEI 269 (430)
T ss_pred ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCceE
Confidence 44566777889999999999999876643 369999998886544 3333344567899999998874 44455 57
Q ss_pred EEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCC-cEEEeec-C--CeEEEEECCCCceeEEeeccccCCeEEEEECC
Q psy8748 1759 TVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSG-D--MKIVTWNLETGQRIHEVAQAHIGDVVSISLSP 1834 (2004)
Q Consensus 1759 rVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~-D--GtI~IWDl~tg~~i~~il~~h~~~ItsLafSP 1834 (2004)
.+||+.++. ...+..+........|++++ .++..+. + ..|+++|+.+++....... ........|+|
T Consensus 270 y~~d~~~~~-------~~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~~lt~~--~~~~~~~~~Sp 340 (430)
T PRK00178 270 YVMDLASRQ-------LSRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAERVTFV--GNYNARPRLSA 340 (430)
T ss_pred EEEECCCCC-------eEEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecC--CCCccceEECC
Confidence 778886542 12233344445566787654 4544443 3 3688888887764322221 22344578999
Q ss_pred CCCEEEEEECC-C--eEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECC---CeEEEEEccCCceeEEEcCCC
Q psy8748 1835 DGQYFVTGSVD-K--SCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSED---KTARLFDIRADQQIATYLPPN 1908 (2004)
Q Consensus 1835 dg~~LaSGS~D-G--sIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~D---GtIrIWDLrtgk~i~t~~~~~ 1908 (2004)
+|++++..+.+ | .|.+||+.+++.. .+.. ........|+|+|+.++..+.+ +.+.+++.. +.....+. .
T Consensus 341 dg~~i~~~~~~~~~~~l~~~dl~tg~~~-~lt~-~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~~-g~~~~~l~--~ 415 (430)
T PRK00178 341 DGKTLVMVHRQDGNFHVAAQDLQRGSVR-ILTD-TSLDESPSVAPNGTMLIYATRQQGRGVLMLVSIN-GRVRLPLP--T 415 (430)
T ss_pred CCCEEEEEEccCCceEEEEEECCCCCEE-EccC-CCCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEECc--C
Confidence 99999887654 3 5889999887643 3322 2223356899999998876654 346777775 33333332 2
Q ss_pred CCCCeEEEEEcC
Q psy8748 1909 KNSGFTSCAVSS 1920 (2004)
Q Consensus 1909 ~~s~ItsLafSP 1920 (2004)
..+.+...+|+|
T Consensus 416 ~~g~~~~p~ws~ 427 (430)
T PRK00178 416 AQGEVREPSWSP 427 (430)
T ss_pred CCCCcCCCccCC
Confidence 223455666765
No 269
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=98.77 E-value=1.8e-06 Score=105.79 Aligned_cols=278 Identities=12% Similarity=0.063 Sum_probs=186.8
Q ss_pred cccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCC--------------
Q psy8748 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDN-------------- 1756 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DG-------------- 1756 (2004)
-.-++..++|||.|.+|++....| |.+|+...+..+..+. | ..|..+.|+|.+++|.+=+..+
T Consensus 31 ~~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~~l~~~~-~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~ 107 (561)
T COG5354 31 ENWPVAYVSESPLGTYLFSEHAAG-VECWGGPSKAKLVRFR-H-PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSK 107 (561)
T ss_pred cCcchhheeecCcchheehhhccc-eEEccccchhheeeee-c-CCceecccCcccceeeeeccCCccChhhccCCcccc
Confidence 345788999999999999887654 9999988877666555 3 3489999999999999865443
Q ss_pred -eEEEEEcCCCCCCCcceEEEEEecCccc--ee-eeEEeCCCcEEEeecCCeEEEEECCCCceeE-EeeccccCCeEEEE
Q psy8748 1757 -MCTVYDLNNRDSTGAAKVIRELLGYEGF--LS-SCRFIDDTTLLTGSGDMKIVTWNLETGQRIH-EVAQAHIGDVVSIS 1831 (2004)
Q Consensus 1757 -tIrVWDl~t~~~~~~~k~i~sl~gh~~~--Vs-svafsdd~~LlSgS~DGtI~IWDl~tg~~i~-~il~~h~~~ItsLa 1831 (2004)
.+.+||+.++ ..+..+.+.... .. -+.|+-++.+++--....++++++ ++.... .+..-....|....
T Consensus 108 n~~~vwd~~sg------~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~-t~n~~~~p~~~lr~~gi~dFs 180 (561)
T COG5354 108 NNVFVWDIASG------MIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGSSLYIHEI-TDNIEEHPFKNLRPVGILDFS 180 (561)
T ss_pred CceeEEeccCc------eeEeeccccCCcccccceeeeeecchhhhhhccCeEEEEec-CCccccCchhhccccceeeEE
Confidence 4899999765 334444333333 33 455664444333335567899997 333221 11112235688899
Q ss_pred ECCCCC--EEEE-----EECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEE-----------CCCeEEEE
Q psy8748 1832 LSPDGQ--YFVT-----GSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGS-----------EDKTARLF 1893 (2004)
Q Consensus 1832 fSPdg~--~LaS-----GS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS-----------~DGtIrIW 1893 (2004)
|+|.++ .|+. ++.++.+++|.+..+..+.+..-....-..+.|.+.|+++++-- ....++++
T Consensus 181 isP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ksnKsyfgesnLyl~ 260 (561)
T COG5354 181 ISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKSNKSYFGESNLYLL 260 (561)
T ss_pred ecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeecccceeccceEEEE
Confidence 999643 3443 45678899999987766554433333345678888888765432 12457888
Q ss_pred EccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEE--eCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEE
Q psy8748 1894 DIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCG--SDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSS 1971 (2004)
Q Consensus 1894 DLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSG--SsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS 1971 (2004)
++......... ...++|...+|.|.++.+++. -.+..+.++|++.. .... ...+.=..+.|+|.+++++.+|
T Consensus 261 ~~~e~~i~V~~---~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~--~Pe~~rNT~~fsp~~r~il~ag 334 (561)
T COG5354 261 RITERSIPVEK---DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFY--FPEQKRNTIFFSPHERYILFAG 334 (561)
T ss_pred eecccccceec---cccccceeeeecccCCceeEEecccccceeecccccc-eEEe--cCCcccccccccCcccEEEEec
Confidence 88744433332 335789999999988776654 46788999998655 3332 3345556788999999999887
Q ss_pred CC---CeEEEEECCCC
Q psy8748 1972 WD---QFVKVWQESNT 1984 (2004)
Q Consensus 1972 ~D---GtIrIWdlstg 1984 (2004)
-| |.|-+|+..+.
T Consensus 335 F~nl~gni~i~~~~~r 350 (561)
T COG5354 335 FDNLQGNIEIFDPAGR 350 (561)
T ss_pred CCccccceEEeccCCc
Confidence 65 78999998876
No 270
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.77 E-value=1.7e-06 Score=109.78 Aligned_cols=239 Identities=15% Similarity=0.100 Sum_probs=145.1
Q ss_pred CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCE--E-EEeecCC--eEEEEEcCCCCCCCcceEEEEEecCccceeee
Q psy8748 1714 GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNF--V-ACGGMDN--MCTVYDLNNRDSTGAAKVIRELLGYEGFLSSC 1788 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~--L-aSGS~DG--tIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssv 1788 (2004)
+.|.+.|...+. .+.+......+.+-.|+|||+. + ++...+| .|.+.++..++ ...+.. ..+.....
T Consensus 165 ~~l~~~d~dG~~-~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~----~~~lt~---~~g~~~~p 236 (428)
T PRK01029 165 GELWSVDYDGQN-LRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPA----GKKILA---LQGNQLMP 236 (428)
T ss_pred ceEEEEcCCCCC-ceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCC----ceEeec---CCCCccce
Confidence 467777865443 3344445556677899999974 2 2444444 56666776542 222222 23334456
Q ss_pred EEeCCC-cEEEee-cCC----eEEEEECCCC--ceeEEeeccccCCeEEEEECCCCCEEEEEE-CCCeEEEE--ECCC-C
Q psy8748 1789 RFIDDT-TLLTGS-GDM----KIVTWNLETG--QRIHEVAQAHIGDVVSISLSPDGQYFVTGS-VDKSCKLW--DFRE-K 1856 (2004)
Q Consensus 1789 afsdd~-~LlSgS-~DG----tI~IWDl~tg--~~i~~il~~h~~~ItsLafSPdg~~LaSGS-~DGsIrIW--Dlrs-~ 1856 (2004)
.|++++ .++..+ .+| .+..|++..+ .....+.....+.....+|+|||+.|+..+ .+|...+| ++.. +
T Consensus 237 ~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g 316 (428)
T PRK01029 237 TFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEG 316 (428)
T ss_pred EECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccc
Confidence 788665 444433 222 3444676653 122233323333456789999999887765 45654444 5432 2
Q ss_pred eEEEEEecCCCCeEEEEEeCCCCEEEEEECC---CeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeC---
Q psy8748 1857 KCVQTFFGHEADVNSVCFHPSGLAFATGSED---KTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSD--- 1930 (2004)
Q Consensus 1857 k~I~tl~~h~s~ItsIafSPdg~~LaSgS~D---GtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSs--- 1930 (2004)
.....+..+...+....|+|||+.|+..+.+ ..|.+||+.+++...... . ...+....|+|||++|+....
T Consensus 317 ~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~Lt~--~-~~~~~~p~wSpDG~~L~f~~~~~g 393 (428)
T PRK01029 317 QSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQLTT--S-PENKESPSWAIDSLHLVYSAGNSN 393 (428)
T ss_pred cceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEEccC--C-CCCccceEECCCCCEEEEEECCCC
Confidence 3334444455567789999999998876543 369999998887643321 1 234567899999998875443
Q ss_pred CCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCC
Q psy8748 1931 DNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNG 1964 (2004)
Q Consensus 1931 DGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg 1964 (2004)
.+.|++||+..++...... ..+.+...+|+|-.
T Consensus 394 ~~~L~~vdl~~g~~~~Lt~-~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 394 ESELYLISLITKKTRKIVI-GSGEKRFPSWGAFP 426 (428)
T ss_pred CceEEEEECCCCCEEEeec-CCCcccCceecCCC
Confidence 3568999998776544443 45567778888753
No 271
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.77 E-value=1.5e-05 Score=95.44 Aligned_cols=269 Identities=13% Similarity=0.209 Sum_probs=176.4
Q ss_pred CCeEEEEECCCC--ceEE-EeeCCCCceEEEEEecCCCEEEEeec---CCeEEEEEcCCCCCCCcceEEEEEecCcccee
Q psy8748 1713 DGKLIIWDTWTG--NKTQ-VIPLRSAWVMSVAFAQSGNFVACGGM---DNMCTVYDLNNRDSTGAAKVIRELLGYEGFLS 1786 (2004)
Q Consensus 1713 DGtIrVWDl~Tg--k~l~-ti~~Ht~~ItsLafSPdg~~LaSGS~---DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vs 1786 (2004)
++-|++|++.+. +... ..-.+.+.++-++|+|+++.|.++.. +|.|..|.++... +....+..........+
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~--G~Lt~ln~~~~~g~~p~ 92 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDD--GRLTFLNRQTLPGSPPC 92 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCC--CeEEEeeccccCCCCCe
Confidence 466999988743 2211 12235667889999999998888755 4788888887531 12233332222333335
Q ss_pred eeEEeCCC-cEEEee-cCCeEEEEECCC-CceeEE-eeccccCC----------eEEEEECCCCCEEEEEECC-CeEEEE
Q psy8748 1787 SCRFIDDT-TLLTGS-GDMKIVTWNLET-GQRIHE-VAQAHIGD----------VVSISLSPDGQYFVTGSVD-KSCKLW 1851 (2004)
Q Consensus 1787 svafsdd~-~LlSgS-~DGtI~IWDl~t-g~~i~~-il~~h~~~----------ItsLafSPdg~~LaSGS~D-GsIrIW 1851 (2004)
.++...++ .++++. ..|.|.++-++. |..... -...|.+. +....+.|+++++++.+-. -.|.+|
T Consensus 93 yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y 172 (346)
T COG2706 93 YVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLY 172 (346)
T ss_pred EEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEE
Confidence 56666555 455444 468899998865 332211 11234443 7889999999999887632 369999
Q ss_pred ECCCCeEEEEE---ecCCCCeEEEEEeCCCCEEEEEEC-CCeEEEEEccCC-ceeEEEc---C----CCCCCCeEEEEEc
Q psy8748 1852 DFREKKCVQTF---FGHEADVNSVCFHPSGLAFATGSE-DKTARLFDIRAD-QQIATYL---P----PNKNSGFTSCAVS 1919 (2004)
Q Consensus 1852 Dlrs~k~I~tl---~~h~s~ItsIafSPdg~~LaSgS~-DGtIrIWDLrtg-k~i~t~~---~----~~~~s~ItsLafS 1919 (2004)
++..+.....- .......+.|.|+|++++.++.++ +++|.+|..... .....+. . -........+.++
T Consensus 173 ~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis 252 (346)
T COG2706 173 DLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHIS 252 (346)
T ss_pred EcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEEC
Confidence 99977643221 144567889999999999877665 899999998763 2222211 0 1123456789999
Q ss_pred CCCCEEEEEeC-CCeEEEEECCC--Cee--eEEEccCCCCeEEEEEcCCCCEEEEEECC-CeEEEEECCC
Q psy8748 1920 SSGRYIFCGSD-DNNVHVWDLLK--TTH--NGVLSGHENRVTSISLSPNGMALVTSSWD-QFVKVWQESN 1983 (2004)
Q Consensus 1920 PdG~~LaSGSs-DGsIrIWDL~t--ge~--l~tL~gHs~~VtsLaFSPDg~~LaSgS~D-GtIrIWdlst 1983 (2004)
+||++|+++.. ...|.+|.+.. ++. +.....+...-.++.|+++|++|++++.| ..|.+|.++.
T Consensus 253 ~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~ 322 (346)
T COG2706 253 PDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDK 322 (346)
T ss_pred CCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcC
Confidence 99999998764 34788887754 322 22223355557899999999999998875 4699998763
No 272
>KOG0974|consensus
Probab=98.75 E-value=1.4e-07 Score=122.78 Aligned_cols=195 Identities=26% Similarity=0.413 Sum_probs=148.8
Q ss_pred CceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccc-e-eeeEEe---CCCcEEEeecCCeEEEEE
Q psy8748 1735 AWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGF-L-SSCRFI---DDTTLLTGSGDMKIVTWN 1809 (2004)
Q Consensus 1735 ~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~-V-ssvafs---dd~~LlSgS~DGtI~IWD 1809 (2004)
.+|....+..+...++.++.+..+.+||..... ........... . .++.+. ..-++++|+.-+.|.+|+
T Consensus 88 ~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~------~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~ 161 (967)
T KOG0974|consen 88 DWIFGAKLFEENKKIALVTSRNSLLIRDSKNSS------VLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWK 161 (967)
T ss_pred ccccccchhhhcceEEEEEcCceEEEEecccCc------eehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEe
Confidence 445555566677888999999999999987542 11222111111 1 111111 222488888999999999
Q ss_pred CCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEE-EEecCCCCeEEEEEeCCCCEEEEEECCC
Q psy8748 1810 LETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQ-TFFGHEADVNSVCFHPSGLAFATGSEDK 1888 (2004)
Q Consensus 1810 l~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~-tl~~h~s~ItsIafSPdg~~LaSgS~DG 1888 (2004)
....+.. ....+|.+.|.++.++-+|+++++.++|.++++|++.+.+... +..+|...|+.++|+|+ .+++++.|.
T Consensus 162 ~~~dn~p-~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedc 238 (967)
T KOG0974|consen 162 PHEDNKP-IRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDC 238 (967)
T ss_pred ccccCCc-ceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccce
Confidence 9843333 3567999999999999999999999999999999999988766 66799999999999998 899999999
Q ss_pred eEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy8748 1889 TARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLL 1940 (2004)
Q Consensus 1889 tIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~ 1940 (2004)
+.++|+.. +.....+. ......+..++..++...+++++.||.+++||+.
T Consensus 239 tcrvW~~~-~~~l~~y~-~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~ 288 (967)
T KOG0974|consen 239 TCRVWGVN-GTQLEVYD-EHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLN 288 (967)
T ss_pred EEEEEecc-cceehhhh-hhhhcceeEEEEcCCceEEEeeccCcchhhhhhh
Confidence 99999765 44444443 2334679999999999999999999999999974
No 273
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.75 E-value=5.6e-06 Score=101.73 Aligned_cols=237 Identities=12% Similarity=0.104 Sum_probs=154.5
Q ss_pred EeCCCCEEEEEeC----------CCeEEEEECCCCceEEEeeCCCC-------ceEEEEEecCCCEEEEee-c-CCeEEE
Q psy8748 1700 YSGDSRHCVSGSL----------DGKLIIWDTWTGNKTQVIPLRSA-------WVMSVAFAQSGNFVACGG-M-DNMCTV 1760 (2004)
Q Consensus 1700 FSPDG~~LASGS~----------DGtIrVWDl~Tgk~l~ti~~Ht~-------~ItsLafSPdg~~LaSGS-~-DGtIrV 1760 (2004)
+||||+.++++.. +..|.+||..+++.+..+..... ....++++|||+++++.. . +..|.+
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~V 132 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGV 132 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEE
Confidence 8899998776655 68999999999999988875322 334789999999998776 3 689999
Q ss_pred EEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCC-CceeEE---eeccccCCeE-EEEECC-
Q psy8748 1761 YDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLET-GQRIHE---VAQAHIGDVV-SISLSP- 1834 (2004)
Q Consensus 1761 WDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~t-g~~i~~---il~~h~~~It-sLafSP- 1834 (2004)
+|+..++ ....+.- .+...... ..+..+.+.+.||......+.+ |+.... ++......+. .-.|.+
T Consensus 133 vD~~~~k------vv~ei~v-p~~~~vy~-t~e~~~~~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~ 204 (352)
T TIGR02658 133 VDLEGKA------FVRMMDV-PDCYHIFP-TANDTFFMHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNK 204 (352)
T ss_pred EECCCCc------EEEEEeC-CCCcEEEE-ecCCccEEEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcC
Confidence 9998653 3333322 11111111 2223333445555555544332 221111 1111000000 003445
Q ss_pred CCCEEEEEECCCeEEEEECCCC-----eEEEEEec-------CCCCeEEEEEeCCCCEEEEEEC----------CCeEEE
Q psy8748 1835 DGQYFVTGSVDKSCKLWDFREK-----KCVQTFFG-------HEADVNSVCFHPSGLAFATGSE----------DKTARL 1892 (2004)
Q Consensus 1835 dg~~LaSGS~DGsIrIWDlrs~-----k~I~tl~~-------h~s~ItsIafSPdg~~LaSgS~----------DGtIrI 1892 (2004)
+|+++++... |.|.+.|+... .....+.. ..+.+.-++++++++.+++... .+.|.+
T Consensus 205 dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~V 283 (352)
T TIGR02658 205 SGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFV 283 (352)
T ss_pred CCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEE
Confidence 7888887776 99999996433 22222211 1233445999999999888431 247999
Q ss_pred EEccCCceeEEEcCCCCCCCeEEEEEcCCCC-EEEEEe-CCCeEEEEECCCCeeeEEE
Q psy8748 1893 FDIRADQQIATYLPPNKNSGFTSCAVSSSGR-YIFCGS-DDNNVHVWDLLKTTHNGVL 1948 (2004)
Q Consensus 1893 WDLrtgk~i~t~~~~~~~s~ItsLafSPdG~-~LaSGS-sDGsIrIWDL~tge~l~tL 1948 (2004)
+|..+++.+..+.. ...+..++++|||+ ++++.. .++.|.++|..+++.++.+
T Consensus 284 iD~~t~kvi~~i~v---G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 284 VDAKTGKRLRKIEL---GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred EECCCCeEEEEEeC---CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 99999999988853 24688999999999 877666 5788999999999999887
No 274
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.73 E-value=2.5e-06 Score=108.17 Aligned_cols=227 Identities=13% Similarity=0.076 Sum_probs=137.1
Q ss_pred cccccccceeEEEEeCCCCE--E-EEEeCCC--eEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeec-CC----
Q psy8748 1687 SLKGHINKVNSVHYSGDSRH--C-VSGSLDG--KLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGM-DN---- 1756 (2004)
Q Consensus 1687 sL~GHt~~VtsLaFSPDG~~--L-ASGS~DG--tIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~-DG---- 1756 (2004)
.|..+...+.+-+|||||+. + ++...+| .|++.++.+|+...... ..+......|+|||+.|+..+. +|
T Consensus 179 ~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~-~~g~~~~p~wSPDG~~Laf~s~~~g~~di 257 (428)
T PRK01029 179 PLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILA-LQGNQLMPTFSPRKKLLAFISDRYGNPDL 257 (428)
T ss_pred EcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeec-CCCCccceEECCCCCEEEEEECCCCCcce
Confidence 34445566778899999975 2 2443443 57777988776544332 3444567899999998876553 22
Q ss_pred eEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCc-EEEee-cCCe--EEEEECCC-CceeEEeeccccCCeEEEE
Q psy8748 1757 MCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTT-LLTGS-GDMK--IVTWNLET-GQRIHEVAQAHIGDVVSIS 1831 (2004)
Q Consensus 1757 tIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~-LlSgS-~DGt--I~IWDl~t-g~~i~~il~~h~~~ItsLa 1831 (2004)
.+..|++..+.. ........+.........|++++. ++..+ .+|. |+++++.. +... .....+...+....
T Consensus 258 ~~~~~~~~~g~~---g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~-~~lt~~~~~~~~p~ 333 (428)
T PRK01029 258 FIQSFSLETGAI---GKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSP-RLLTKKYRNSSCPA 333 (428)
T ss_pred eEEEeecccCCC---CcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcccccce-EEeccCCCCcccee
Confidence 344466654211 111112222223445668886654 55444 4564 55555542 2222 22233445677899
Q ss_pred ECCCCCEEEEEECC---CeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEEC---CCeEEEEEccCCceeEEEc
Q psy8748 1832 LSPDGQYFVTGSVD---KSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSE---DKTARLFDIRADQQIATYL 1905 (2004)
Q Consensus 1832 fSPdg~~LaSGS~D---GsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~---DGtIrIWDLrtgk~i~t~~ 1905 (2004)
|+|||+.|+..+.+ ..|.+||+.+++... +......+....|+|||+.|+..+. .+.|.+||+.+++......
T Consensus 334 wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~-Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~ 412 (428)
T PRK01029 334 WSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ-LTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVI 412 (428)
T ss_pred ECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE-ccCCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeec
Confidence 99999988877643 369999998887543 3333446678999999998876543 3468889988776544432
Q ss_pred CCCCCCCeEEEEEcCCC
Q psy8748 1906 PPNKNSGFTSCAVSSSG 1922 (2004)
Q Consensus 1906 ~~~~~s~ItsLafSPdG 1922 (2004)
..+.+...+|+|-.
T Consensus 413 ---~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 413 ---GSGEKRFPSWGAFP 426 (428)
T ss_pred ---CCCcccCceecCCC
Confidence 22345667887743
No 275
>KOG1064|consensus
Probab=98.72 E-value=3.8e-08 Score=131.84 Aligned_cols=194 Identities=18% Similarity=0.231 Sum_probs=155.0
Q ss_pred ceeeeEEeC-CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy8748 1784 FLSSCRFID-DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTF 1862 (2004)
Q Consensus 1784 ~Vssvafsd-d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl 1862 (2004)
.+.++.-++ ....++|+.||.|++|....++.+..........|+.+.|+.+|+.+..+..||.+.+|... .++....
T Consensus 2210 ~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~ 2288 (2439)
T KOG1064|consen 2210 NVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSW 2288 (2439)
T ss_pred ceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhhhhcccCCceeeeccCCceeecccC-Ccceecc
Confidence 344444443 34688999999999999999998877766666899999999999999999999999999986 6677778
Q ss_pred ecCCCCeEEEEEeCCCCEEEEEE---CCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1863 FGHEADVNSVCFHPSGLAFATGS---EDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1863 ~~h~s~ItsIafSPdg~~LaSgS---~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
+.|......+.|-. ..+++++ .++.+.+||....... .+....|.++++++++.|....+++|+.+|.|++||+
T Consensus 2289 qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~-s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~ 2365 (2439)
T KOG1064|consen 2289 QCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMN-SLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDI 2365 (2439)
T ss_pred ccCCccccceeeee--hhhhccccCCCCCcccchhcccCccc-ceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeeh
Confidence 88988888888876 4566654 4678999996532221 1222567788999999999999999999999999999
Q ss_pred CCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEE
Q psy8748 1940 LKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLK 1991 (2004)
Q Consensus 1940 ~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik 1991 (2004)
+..+..++++. ++ ...++++|+..|.|+||++..-..+....
T Consensus 2366 rqrql~h~~~~---------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2366 RQRQLRHTFQA---------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred HHHHHHHHhhh---------hh-hhheeeccCcccceEEEEccccchhhcCc
Confidence 88887777764 44 66789999999999999999865444433
No 276
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.72 E-value=7.2e-06 Score=113.96 Aligned_cols=200 Identities=9% Similarity=0.125 Sum_probs=134.4
Q ss_pred eeeeEEeC-CCcEEEe-ecCCeEEEEECCCCceeEEeec-cc---------------cCCeEEEEECC-CCCEEEEEECC
Q psy8748 1785 LSSCRFID-DTTLLTG-SGDMKIVTWNLETGQRIHEVAQ-AH---------------IGDVVSISLSP-DGQYFVTGSVD 1845 (2004)
Q Consensus 1785 Vssvafsd-d~~LlSg-S~DGtI~IWDl~tg~~i~~il~-~h---------------~~~ItsLafSP-dg~~LaSGS~D 1845 (2004)
...+++.+ ++.++++ +.++.|+.+|..++... .+.. +. ......++++| ++..+++.+.+
T Consensus 626 P~GIavd~~gn~LYVaDt~n~~Ir~id~~~~~V~-tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~ 704 (1057)
T PLN02919 626 PQGLAYNAKKNLLYVADTENHALREIDFVNETVR-TLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQ 704 (1057)
T ss_pred CcEEEEeCCCCEEEEEeCCCceEEEEecCCCEEE-EEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCC
Confidence 45666664 4445444 45678999998776532 2211 00 12346799999 45566666678
Q ss_pred CeEEEEECCCCeEEEEEecC---------------CCCeEEEEEeCCCCEE-EEEECCCeEEEEEccCCceeEEEcC---
Q psy8748 1846 KSCKLWDFREKKCVQTFFGH---------------EADVNSVCFHPSGLAF-ATGSEDKTARLFDIRADQQIATYLP--- 1906 (2004)
Q Consensus 1846 GsIrIWDlrs~k~I~tl~~h---------------~s~ItsIafSPdg~~L-aSgS~DGtIrIWDLrtgk~i~t~~~--- 1906 (2004)
+.|++||..++... .+.+. -.....++++|+++.+ ++.+.++.|++||+.++........
T Consensus 705 ~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~ 783 (1057)
T PLN02919 705 HQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPT 783 (1057)
T ss_pred CeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccc
Confidence 89999998876532 22111 1235679999999854 4555678999999987653221100
Q ss_pred --------CC--------CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEc-------------cCCCCeEE
Q psy8748 1907 --------PN--------KNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLS-------------GHENRVTS 1957 (2004)
Q Consensus 1907 --------~~--------~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~-------------gHs~~Vts 1957 (2004)
.. .......++++++|+.+++-..+++|++||..++....... ++-....+
T Consensus 784 ~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~G 863 (1057)
T PLN02919 784 FSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAG 863 (1057)
T ss_pred cCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceE
Confidence 00 01124578999999988888889999999998776654321 11235789
Q ss_pred EEEcCCCCEEEEEECCCeEEEEECCCCeE
Q psy8748 1958 ISLSPNGMALVTSSWDQFVKVWQESNTIV 1986 (2004)
Q Consensus 1958 LaFSPDg~~LaSgS~DGtIrIWdlstg~l 1986 (2004)
++++++|+++++-+.++.|++||+.++..
T Consensus 864 Iavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 864 LALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred EEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 99999999999888999999999998764
No 277
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.71 E-value=1.1e-05 Score=93.06 Aligned_cols=222 Identities=18% Similarity=0.166 Sum_probs=146.6
Q ss_pred CCCeEEEEECCCCceEEEeeCCC--CceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeE
Q psy8748 1712 LDGKLIIWDTWTGNKTQVIPLRS--AWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCR 1789 (2004)
Q Consensus 1712 ~DGtIrVWDl~Tgk~l~ti~~Ht--~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssva 1789 (2004)
.+|+|..||..+|+.+....... ....+. ..+++..+++++.++.+..||..+++ ..-.... ...+....
T Consensus 1 ~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~l~~~d~~tG~------~~W~~~~-~~~~~~~~ 72 (238)
T PF13360_consen 1 DDGTLSALDPRTGKELWSYDLGPGIGGPVAT-AVPDGGRVYVASGDGNLYALDAKTGK------VLWRFDL-PGPISGAP 72 (238)
T ss_dssp -TSEEEEEETTTTEEEEEEECSSSCSSEEET-EEEETTEEEEEETTSEEEEEETTTSE------EEEEEEC-SSCGGSGE
T ss_pred CCCEEEEEECCCCCEEEEEECCCCCCCccce-EEEeCCEEEEEcCCCEEEEEECCCCC------EEEEeec-ccccccee
Confidence 36899999999999998886421 112211 23357778888899999999997653 3333222 22222223
Q ss_pred EeCCCcEEEeecCCeEEEEECCCCceeEEeeccc---cCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCC
Q psy8748 1790 FIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAH---IGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHE 1866 (2004)
Q Consensus 1790 fsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h---~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~ 1866 (2004)
...++.+++++.++.++.+|..+|+...+..... ............+..++++..+|.|..+|.++|+.+.......
T Consensus 73 ~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~ 152 (238)
T PF13360_consen 73 VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGE 152 (238)
T ss_dssp EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESST
T ss_pred eecccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCC
Confidence 4567778888889999999999999987742221 1112222233347889999989999999999999988876543
Q ss_pred CC----------eEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q psy8748 1867 AD----------VNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHV 1936 (2004)
Q Consensus 1867 s~----------ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrI 1936 (2004)
.. +.+-....++ .++.++.+|.+..+|+.+++...... .. .+.. ....++..+++++.+|.|..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~~-~~---~~~~-~~~~~~~~l~~~~~~~~l~~ 226 (238)
T PF13360_consen 153 PRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWSKP-IS---GIYS-LPSVDGGTLYVTSSDGRLYA 226 (238)
T ss_dssp T-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEEEC-SS----ECE-CEECCCTEEEEEETTTEEEE
T ss_pred CCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEEec-CC---CccC-CceeeCCEEEEEeCCCEEEE
Confidence 22 1122222344 77777778864444999998765432 11 1222 24567888888889999999
Q ss_pred EECCCCeeeEE
Q psy8748 1937 WDLLKTTHNGV 1947 (2004)
Q Consensus 1937 WDL~tge~l~t 1947 (2004)
||+++|+.+..
T Consensus 227 ~d~~tG~~~W~ 237 (238)
T PF13360_consen 227 LDLKTGKVVWQ 237 (238)
T ss_dssp EETTTTEEEEE
T ss_pred EECCCCCEEeE
Confidence 99999988653
No 278
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.69 E-value=5.5e-06 Score=103.89 Aligned_cols=271 Identities=14% Similarity=0.048 Sum_probs=172.2
Q ss_pred CCEEEEEeCCCeEEEEECCCCceEEEeeCCCC----------ceE-EEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcc
Q psy8748 1704 SRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSA----------WVM-SVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAA 1772 (2004)
Q Consensus 1704 G~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~----------~It-sLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~ 1772 (2004)
+..+++++.+|.+.-+|..+|+.+........ .+. .+.. ++..++.++.+|.+..+|.++++.....
T Consensus 69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~ 146 (394)
T PRK11138 69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEVAWQT 146 (394)
T ss_pred CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCCcccc
Confidence 56778888889999999999999887654321 000 1111 3567778888999999999887644433
Q ss_pred eEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC--CCCEEEEEECCCeEEE
Q psy8748 1773 KVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP--DGQYFVTGSVDKSCKL 1850 (2004)
Q Consensus 1773 k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP--dg~~LaSGS~DGsIrI 1850 (2004)
... +.+.+.....++.+++++.+|.+..+|..+|+.+.+.............-+| .+..++.++.+|.+..
T Consensus 147 ~~~-------~~~~ssP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~~~v~~~~~~g~v~a 219 (394)
T PRK11138 147 KVA-------GEALSRPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAFGGAIVGGDNGRVSA 219 (394)
T ss_pred cCC-------CceecCCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEECCEEEEEcCCCEEEE
Confidence 221 1111111123567888889999999999999987665322110000000111 2345777888999999
Q ss_pred EECCCCeEEEEEecCCC-------CeEEEEEeC--CCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCC
Q psy8748 1851 WDFREKKCVQTFFGHEA-------DVNSVCFHP--SGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSS 1921 (2004)
Q Consensus 1851 WDlrs~k~I~tl~~h~s-------~ItsIafSP--dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPd 1921 (2004)
+|..+++.+........ ....+..+| .+..+++++.+|.+..+|..+|+...+..... ...+. ..
T Consensus 220 ~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~----~~~~~--~~ 293 (394)
T PRK11138 220 VLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYGS----VNDFA--VD 293 (394)
T ss_pred EEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCCC----ccCcE--EE
Confidence 99999887655421110 011111222 34567778889999999999999887764321 11122 24
Q ss_pred CCEEEEEeCCCeEEEEECCCCeeeEEEccCCC-CeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEE
Q psy8748 1922 GRYIFCGSDDNNVHVWDLLKTTHNGVLSGHEN-RVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLK 1991 (2004)
Q Consensus 1922 G~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~-~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik 1991 (2004)
+..+++++.+|.+..+|..+|+.+.....-.. ...+... .+.+|+.++.||.|...|..+|+.....+
T Consensus 294 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~ 362 (394)
T PRK11138 294 GGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVAQQK 362 (394)
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEE
Confidence 67788888999999999999987654432111 1222222 25578889999999999999987654444
No 279
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.68 E-value=1.2e-05 Score=111.78 Aligned_cols=241 Identities=17% Similarity=0.148 Sum_probs=158.4
Q ss_pred eEEEEeCC-CCEEEEEeCCCeEEEEECCCCceEEEeeC--C------------CCceEEEEEecCCCEEEEee-cCCeEE
Q psy8748 1696 NSVHYSGD-SRHCVSGSLDGKLIIWDTWTGNKTQVIPL--R------------SAWVMSVAFAQSGNFVACGG-MDNMCT 1759 (2004)
Q Consensus 1696 tsLaFSPD-G~~LASGS~DGtIrVWDl~Tgk~l~ti~~--H------------t~~ItsLafSPdg~~LaSGS-~DGtIr 1759 (2004)
..++++++ +..+++-..++.|++||.. |..+..+.. . -.....++++++++.|+++. .++.|+
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~-G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir 649 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLD-GNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALR 649 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCC-CCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEE
Confidence 46789875 5567777778899999974 555544432 1 12357899999888665554 457899
Q ss_pred EEEcCCCCCCCcceEEEEEec----------C-------ccceeeeEEeC-CCc-EEEeecCCeEEEEECCCCceeEEee
Q psy8748 1760 VYDLNNRDSTGAAKVIRELLG----------Y-------EGFLSSCRFID-DTT-LLTGSGDMKIVTWNLETGQRIHEVA 1820 (2004)
Q Consensus 1760 VWDl~t~~~~~~~k~i~sl~g----------h-------~~~Vssvafsd-d~~-LlSgS~DGtI~IWDl~tg~~i~~il 1820 (2004)
++|..++. +..+.+ . -.....+++.+ ++. +++.+.++.|++||..++......-
T Consensus 650 ~id~~~~~-------V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~~~~G 722 (1057)
T PLN02919 650 EIDFVNET-------VRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTRVFSG 722 (1057)
T ss_pred EEecCCCE-------EEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEEEEec
Confidence 99886532 111111 0 11234577775 444 5666678999999998775431110
Q ss_pred c-------c------ccCCeEEEEECCCCCEEEE-EECCCeEEEEECCCCeEEEEEec-------------C--------
Q psy8748 1821 Q-------A------HIGDVVSISLSPDGQYFVT-GSVDKSCKLWDFREKKCVQTFFG-------------H-------- 1865 (2004)
Q Consensus 1821 ~-------~------h~~~ItsLafSPdg~~LaS-GS~DGsIrIWDlrs~k~I~tl~~-------------h-------- 1865 (2004)
. + .......++++|+++.+++ -+.++.|++||+.++.......+ .
T Consensus 723 ~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~ 802 (1057)
T PLN02919 723 DGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVL 802 (1057)
T ss_pred CCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhh
Confidence 0 0 1123567999999985554 45568999999987653211100 0
Q ss_pred CCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCC-----------CCCCCeEEEEEcCCCCEEEEEeCCCeE
Q psy8748 1866 EADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPP-----------NKNSGFTSCAVSSSGRYIFCGSDDNNV 1934 (2004)
Q Consensus 1866 ~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~-----------~~~s~ItsLafSPdG~~LaSGSsDGsI 1934 (2004)
-....+++++++|+.+++-+.+++|++||..++......... ........++++++|+.+++-+.++.|
T Consensus 803 l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~I 882 (1057)
T PLN02919 803 LQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLI 882 (1057)
T ss_pred ccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEE
Confidence 112468999999998888888999999999877654332111 111246789999999988888889999
Q ss_pred EEEECCCCee
Q psy8748 1935 HVWDLLKTTH 1944 (2004)
Q Consensus 1935 rIWDL~tge~ 1944 (2004)
++||+.+++.
T Consensus 883 rvid~~~~~~ 892 (1057)
T PLN02919 883 RYLDLNKGEA 892 (1057)
T ss_pred EEEECCCCcc
Confidence 9999988764
No 280
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.68 E-value=5.8e-06 Score=103.68 Aligned_cols=265 Identities=13% Similarity=0.072 Sum_probs=165.3
Q ss_pred CCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCcc
Q psy8748 1704 SRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEG 1783 (2004)
Q Consensus 1704 G~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~ 1783 (2004)
+..++.++.+|.++.+|.++|+.+...........+... .+..+++++.+|.+..+|..+++................
T Consensus 120 ~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~ 197 (394)
T PRK11138 120 GGKVYIGSEKGQVYALNAEDGEVAWQTKVAGEALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRG 197 (394)
T ss_pred CCEEEEEcCCCEEEEEECCCCCCcccccCCCceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccC
Confidence 456777888999999999999998877654321111122 245677788889999999987653222211000000000
Q ss_pred ceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccC------CeEEEEECC--CCCEEEEEECCCeEEEEECCC
Q psy8748 1784 FLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIG------DVVSISLSP--DGQYFVTGSVDKSCKLWDFRE 1855 (2004)
Q Consensus 1784 ~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~------~ItsLafSP--dg~~LaSGS~DGsIrIWDlrs 1855 (2004)
. ..... .++.++.++.+|.+..+|..+|+........... ....+..+| .+..+++++.+|.+..+|..+
T Consensus 198 ~-~sP~v-~~~~v~~~~~~g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~t 275 (394)
T PRK11138 198 E-SAPAT-AFGGAIVGGDNGRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRS 275 (394)
T ss_pred C-CCCEE-ECCEEEEEcCCCEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCC
Confidence 0 01111 2346778888999999999998876543211110 011111222 356777888899999999999
Q ss_pred CeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEE
Q psy8748 1856 KKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVH 1935 (2004)
Q Consensus 1856 ~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIr 1935 (2004)
++.+..... .....+. ..+..++.++.+|.+..+|..+++.+........ .......+ .+.++++++.+|.++
T Consensus 276 G~~~W~~~~--~~~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~-~~~~sp~v--~~g~l~v~~~~G~l~ 348 (394)
T PRK11138 276 GQIVWKREY--GSVNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLH-RLLTAPVL--YNGYLVVGDSEGYLH 348 (394)
T ss_pred CCEEEeecC--CCccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCC-CcccCCEE--ECCEEEEEeCCCEEE
Confidence 987655432 1111222 2456788888999999999999988765432111 11122222 356788899999999
Q ss_pred EEECCCCeeeEEEccCCCCeEE-EEEcCCCCEEEEEECCCeEEEEEC
Q psy8748 1936 VWDLLKTTHNGVLSGHENRVTS-ISLSPNGMALVTSSWDQFVKVWQE 1981 (2004)
Q Consensus 1936 IWDL~tge~l~tL~gHs~~Vts-LaFSPDg~~LaSgS~DGtIrIWdl 1981 (2004)
++|..+|+.+...+.....+.+ ..+ .+..|+.++.||.|+.++.
T Consensus 349 ~ld~~tG~~~~~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 349 WINREDGRFVAQQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred EEECCCCCEEEEEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence 9999999988877644333322 222 3447888999999988765
No 281
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.68 E-value=1.5e-06 Score=110.91 Aligned_cols=219 Identities=16% Similarity=0.111 Sum_probs=135.0
Q ss_pred cccccccceeEEEEeCCCCEEEEEeCC---CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEE-eecCCe--EEE
Q psy8748 1687 SLKGHINKVNSVHYSGDSRHCVSGSLD---GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVAC-GGMDNM--CTV 1760 (2004)
Q Consensus 1687 sL~GHt~~VtsLaFSPDG~~LASGS~D---GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaS-GS~DGt--IrV 1760 (2004)
.+..+...+.+..|+|||+.|+..+.+ ..|++||+.+++.... ....+......|+|||+.|+. .+.+|. |.+
T Consensus 212 ~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~l-t~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~ 290 (448)
T PRK04792 212 MLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKV-TSFPGINGAPRFSPDGKKLALVLSKDGQPEIYV 290 (448)
T ss_pred EeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEe-cCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEE
Confidence 445556778899999999998876543 3589999988865432 222333457899999997765 455665 666
Q ss_pred EEcCCCCCCCcceEEEEEecCccceeeeEEeCCCc-EEEee-cC--CeEEEEECCCCceeEEeeccccCCeEEEEECCCC
Q psy8748 1761 YDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTT-LLTGS-GD--MKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDG 1836 (2004)
Q Consensus 1761 WDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~-LlSgS-~D--GtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg 1836 (2004)
||+.++. ...+..+........|++++. ++..+ .+ ..|+++|+.+++...... ........+|+|||
T Consensus 291 ~dl~tg~-------~~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~Lt~--~g~~~~~~~~SpDG 361 (448)
T PRK04792 291 VDIATKA-------LTRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRLTF--EGEQNLGGSITPDG 361 (448)
T ss_pred EECCCCC-------eEECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEEec--CCCCCcCeeECCCC
Confidence 6765432 223333444556677876554 44433 23 357777887776542222 22223457899999
Q ss_pred CEEEEEECC-C--eEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECC-C--eEEEEEccCCceeEEEcCCCCC
Q psy8748 1837 QYFVTGSVD-K--SCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSED-K--TARLFDIRADQQIATYLPPNKN 1910 (2004)
Q Consensus 1837 ~~LaSGS~D-G--sIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~D-G--tIrIWDLrtgk~i~t~~~~~~~ 1910 (2004)
++++..+.+ + .|.++|+.+++.. .+... .......|+|+|+.++..+.+ | .+.+++.. ++....+.. ..
T Consensus 362 ~~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~-~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~~-G~~~~~l~~--~~ 436 (448)
T PRK04792 362 RSMIMVNRTNGKFNIARQDLETGAMQ-VLTST-RLDESPSVAPNGTMVIYSTTYQGKQVLAAVSID-GRFKARLPA--GQ 436 (448)
T ss_pred CEEEEEEecCCceEEEEEECCCCCeE-EccCC-CCCCCceECCCCCEEEEEEecCCceEEEEEECC-CCceEECcC--CC
Confidence 988876653 3 4666788777643 23222 122345799999987766543 3 36777764 555444422 23
Q ss_pred CCeEEEEEcC
Q psy8748 1911 SGFTSCAVSS 1920 (2004)
Q Consensus 1911 s~ItsLafSP 1920 (2004)
+.+...+|+|
T Consensus 437 g~~~~p~Wsp 446 (448)
T PRK04792 437 GEVKSPAWSP 446 (448)
T ss_pred CCcCCCccCC
Confidence 4456677776
No 282
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.66 E-value=6e-06 Score=112.89 Aligned_cols=279 Identities=14% Similarity=0.137 Sum_probs=173.7
Q ss_pred cccceeEEEEeCCCCEEEEEeCCCeEEEE----ECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCC
Q psy8748 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIW----DTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNR 1766 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~LASGS~DGtIrVW----Dl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~ 1766 (2004)
..+.|.++.|-++...++.+..+|.|.+. +..+.. +...-.-+..|.+++||||+..++.++.+|++.+.+-+
T Consensus 74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~-~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt~~-- 150 (928)
T PF04762_consen 74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDE-IEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMTRD-- 150 (928)
T ss_pred CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCce-eEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEecc--
Confidence 44789999999999999999999999999 443332 22233345679999999999999999999988887542
Q ss_pred CCCCcceEEEEEecCc-----cceeeeEEeCCCcEEEeecCCeEE--EEECCCCceeEEeeccccCCeEEEEECCCCCEE
Q psy8748 1767 DSTGAAKVIRELLGYE-----GFLSSCRFIDDTTLLTGSGDMKIV--TWNLETGQRIHEVAQAHIGDVVSISLSPDGQYF 1839 (2004)
Q Consensus 1767 ~~~~~~k~i~sl~gh~-----~~Vssvafsdd~~LlSgS~DGtI~--IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~L 1839 (2004)
+..+....-+. .....+-|.....-+=|+...... .-|....+.-..... ....-..++|-.||.+|
T Consensus 151 -----fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yF 224 (928)
T PF04762_consen 151 -----FDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYF 224 (928)
T ss_pred -----ceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccc-cCCCceEEEECCCCcEE
Confidence 22222221111 111222222211111111111000 001000000000111 34456789999999999
Q ss_pred EEEEC---C---CeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEEC---CCeEEEEEccCCceeEEEcCC--C
Q psy8748 1840 VTGSV---D---KSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSE---DKTARLFDIRADQQIATYLPP--N 1908 (2004)
Q Consensus 1840 aSGS~---D---GsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~---DGtIrIWDLrtgk~i~t~~~~--~ 1908 (2004)
++.+. . ..|+||+-+ |....+-..-.+--.+++|.|.|+++++... ...|.+|.- +|-.-..|..+ .
T Consensus 225 AVss~~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfEr-NGLrhgeF~l~~~~ 302 (928)
T PF04762_consen 225 AVSSVEPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFER-NGLRHGEFTLRFDP 302 (928)
T ss_pred EEEEEEcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEec-CCcEeeeEecCCCC
Confidence 99875 3 479999954 6655444433444457899999999998775 345777774 45554555433 3
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee--EEEcc-CCCCeEEEEEcCC-CCEEEEEECCCeEEEEEC
Q psy8748 1909 KNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHN--GVLSG-HENRVTSISLSPN-GMALVTSSWDQFVKVWQE 1981 (2004)
Q Consensus 1909 ~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l--~tL~g-Hs~~VtsLaFSPD-g~~LaSgS~DGtIrIWdl 1981 (2004)
....+..+.|++|+..||+...|. |.+|-..+..-. +.+.. ....+..+.|+|. ...|.....+|.+..++.
T Consensus 303 ~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~~ 378 (928)
T PF04762_consen 303 EEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYDF 378 (928)
T ss_pred CCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEEE
Confidence 456789999999999999987665 999998876532 22322 2344566999985 445777776677766544
No 283
>KOG4532|consensus
Probab=98.66 E-value=3.2e-06 Score=96.81 Aligned_cols=259 Identities=14% Similarity=0.101 Sum_probs=172.7
Q ss_pred CCeEEEEECCCCc--eEEEeeCCCCceEEEEEec-----CCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccce
Q psy8748 1713 DGKLIIWDTWTGN--KTQVIPLRSAWVMSVAFAQ-----SGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFL 1785 (2004)
Q Consensus 1713 DGtIrVWDl~Tgk--~l~ti~~Ht~~ItsLafSP-----dg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~V 1785 (2004)
...+.+|+..+.. .+... ..+.|-| ...+|+.||..|...+|...+.+ ........+...|
T Consensus 51 t~sv~i~~~y~N~~~iv~~y-------~g~~F~p~s~~~kc~~la~gG~~g~fd~~~~~tn~-----~h~~~cd~snn~v 118 (344)
T KOG4532|consen 51 TISVPINSHYSNPKGIVEFY-------TGMTFTPGSFINKCVTLADGGASGQFDLFACNTND-----GHLYQCDVSNNDV 118 (344)
T ss_pred eeeeEeccccCCchhhEEee-------ecccccchHhhccccEEEeccccceeeeecccCcc-----cceeeecccccch
Confidence 3456777765543 22222 2344444 35689999999999999987643 1111222222222
Q ss_pred eeeEEe--CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCe-E-EE-
Q psy8748 1786 SSCRFI--DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKK-C-VQ- 1860 (2004)
Q Consensus 1786 ssvafs--dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k-~-I~- 1860 (2004)
+-+.-. ....+..++.|.++++.+++.+.......... -.+.+++++++++++++.+....|..|.+.... . +.
T Consensus 119 ~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~-~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~ 197 (344)
T KOG4532|consen 119 TLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQN-LTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENI 197 (344)
T ss_pred hhhhhhcccccceeeccCCcceeEEEEecCcccceeeccc-cceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeee
Confidence 211111 22347788889888888887654432221111 237889999999999999999999999887432 2 22
Q ss_pred EEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEE---cCCCCCCCeEEEEEcCCC--CEEEEEeCCCeEE
Q psy8748 1861 TFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATY---LPPNKNSGFTSCAVSSSG--RYIFCGSDDNNVH 1935 (2004)
Q Consensus 1861 tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~---~~~~~~s~ItsLafSPdG--~~LaSGSsDGsIr 1935 (2004)
......+.-.+..|+.....++++..||++.|||++........ ..+.|.+.+..+.|++.| .+|+..-.-+.+.
T Consensus 198 ~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~h 277 (344)
T KOG4532|consen 198 YEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVH 277 (344)
T ss_pred EecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEE
Confidence 22234455678899999999999999999999999876543322 345688999999999866 3566666678999
Q ss_pred EEECCCCeeeEEEc-------cCC-CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCe
Q psy8748 1936 VWDLLKTTHNGVLS-------GHE-NRVTSISLSPNGMALVTSSWDQFVKVWQESNTI 1985 (2004)
Q Consensus 1936 IWDL~tge~l~tL~-------gHs-~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~ 1985 (2004)
+.|++++.....+. .|. ..|..-.|+.++.-+.+.+++. +.=|++....
T Consensus 278 v~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s~~v~~e~~-~ae~ni~srs 334 (344)
T KOG4532|consen 278 VVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENESNDVKNELQ-GAEYNILSRS 334 (344)
T ss_pred EEEcccCceeeEEecCccccccccccccccccccCCCcccccccchh-hheeeccccc
Confidence 99999987665542 233 3388888988887777777653 5667776653
No 284
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.62 E-value=5.9e-05 Score=90.38 Aligned_cols=269 Identities=14% Similarity=0.202 Sum_probs=171.6
Q ss_pred ccccceeEEEEeCCCCEEEEEeCC---CeEEEEECCC--CceEEE--eeCCCCceEEEEEecCCCEEEEeecC-CeEEEE
Q psy8748 1690 GHINKVNSVHYSGDSRHCVSGSLD---GKLIIWDTWT--GNKTQV--IPLRSAWVMSVAFAQSGNFVACGGMD-NMCTVY 1761 (2004)
Q Consensus 1690 GHt~~VtsLaFSPDG~~LASGS~D---GtIrVWDl~T--gk~l~t--i~~Ht~~ItsLafSPdg~~LaSGS~D-GtIrVW 1761 (2004)
.+.+.++-++|+|++++|.++..+ |.|..|.+.. |+.... ......+-+.++++++|++++++... |.|.++
T Consensus 37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~ 116 (346)
T COG2706 37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVY 116 (346)
T ss_pred cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEE
Confidence 466788899999999999887654 7777776654 544322 22233344789999999999988754 899999
Q ss_pred EcCCCCCCCcceEEEEEecCccc----------eeeeEEeCCCcEEEeec--CCeEEEEECCCCceeEEe--eccccCCe
Q psy8748 1762 DLNNRDSTGAAKVIRELLGYEGF----------LSSCRFIDDTTLLTGSG--DMKIVTWNLETGQRIHEV--AQAHIGDV 1827 (2004)
Q Consensus 1762 Dl~t~~~~~~~k~i~sl~gh~~~----------Vssvafsdd~~LlSgS~--DGtI~IWDl~tg~~i~~i--l~~h~~~I 1827 (2004)
-++....... ......|.+. +....+.+++.++.+.+ --.|.+|++..|...... .......-
T Consensus 117 p~~~dG~l~~---~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~~~~~~v~~G~GP 193 (346)
T COG2706 117 PLQADGSLQP---VVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTPADPAEVKPGAGP 193 (346)
T ss_pred EcccCCcccc---ceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCccccccccccCCCCCc
Confidence 9876432211 1111222222 55666777775444443 346999999977643221 12345567
Q ss_pred EEEEECCCCCEEEEEE-CCCeEEEEECCCC-eEEEEEe---------cCCCCeEEEEEeCCCCEEEEEEC-CCeEEEEEc
Q psy8748 1828 VSISLSPDGQYFVTGS-VDKSCKLWDFREK-KCVQTFF---------GHEADVNSVCFHPSGLAFATGSE-DKTARLFDI 1895 (2004)
Q Consensus 1828 tsLafSPdg~~LaSGS-~DGsIrIWDlrs~-k~I~tl~---------~h~s~ItsIafSPdg~~LaSgS~-DGtIrIWDL 1895 (2004)
..|.|+|++++.++.+ -+++|.+|..+.. ..+..+. ........|..++||++|+++.+ ...|.+|.+
T Consensus 194 RHi~FHpn~k~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~~f~V 273 (346)
T COG2706 194 RHIVFHPNGKYAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIAVFSV 273 (346)
T ss_pred ceEEEcCCCcEEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEEEEEE
Confidence 8999999999887766 4789999998763 2222222 12345678899999999988764 235777776
Q ss_pred cCC--ceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCC-eEEEEEC--CCCeeeEEEc-cCCCCeEEEEEc
Q psy8748 1896 RAD--QQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDN-NVHVWDL--LKTTHNGVLS-GHENRVTSISLS 1961 (2004)
Q Consensus 1896 rtg--k~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDG-sIrIWDL--~tge~l~tL~-gHs~~VtsLaFS 1961 (2004)
... +....-..+.+...-....++++|++|+++..++ .|.+|.. .+|+...... .......|+.|.
T Consensus 274 ~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f~ 345 (346)
T COG2706 274 DPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKFL 345 (346)
T ss_pred cCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEEc
Confidence 543 2221112223333467889999999999988754 5888865 4555444333 344455666663
No 285
>KOG1912|consensus
Probab=98.59 E-value=2.1e-06 Score=108.49 Aligned_cols=311 Identities=11% Similarity=0.108 Sum_probs=194.1
Q ss_pred cccccccccccceeEEEEeCCC------------CEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecC---C-
Q psy8748 1683 MPKKSLKGHINKVNSVHYSGDS------------RHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQS---G- 1746 (2004)
Q Consensus 1683 ~pi~sL~GHt~~VtsLaFSPDG------------~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPd---g- 1746 (2004)
+.+.++.-|...|+.+.|.|-. -.||++.-.|.|.+||...+..+..+..|..++..++|-+. .
T Consensus 46 q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Sr 125 (1062)
T KOG1912|consen 46 QLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSR 125 (1062)
T ss_pred hhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcch
Confidence 4466677799999999997621 15677777899999999999999999999999999999763 3
Q ss_pred CEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe--CCCcEEEeecCCeEEEEECCC-------CceeE
Q psy8748 1747 NFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI--DDTTLLTGSGDMKIVTWNLET-------GQRIH 1817 (2004)
Q Consensus 1747 ~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs--dd~~LlSgS~DGtI~IWDl~t-------g~~i~ 1817 (2004)
..|++-.....+.+|+.++++. .-..........|+.+. +...+..-+..|.+.+-+.-. |+..
T Consensus 126 d~LlaIh~ss~lvLwntdtG~k------~Wk~~ys~~iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~- 198 (1062)
T KOG1912|consen 126 DVLLAIHGSSTLVLWNTDTGEK------FWKYDYSHEILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEF- 198 (1062)
T ss_pred heeEEecCCcEEEEEEccCCce------eeccccCCcceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeE-
Confidence 4677777778999999987642 22222223344444443 344455556666666655421 1111
Q ss_pred EeeccccC------------C-------------eEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEE
Q psy8748 1818 EVAQAHIG------------D-------------VVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSV 1872 (2004)
Q Consensus 1818 ~il~~h~~------------~-------------ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsI 1872 (2004)
.+...|.. . .-.++|+|.-+.++.......+.++|++-..++....-..+.+.-+
T Consensus 199 qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv 278 (1062)
T KOG1912|consen 199 QITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFV 278 (1062)
T ss_pred EEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCccee
Confidence 12112111 0 1135678866655556667889999999888888877667777778
Q ss_pred EEeCCCC--EEEEEECCCeEEEEEccCCceeEEEc----CCCCCCCeEE-----------EEEcCC-CCEEEEEeCCCeE
Q psy8748 1873 CFHPSGL--AFATGSEDKTARLFDIRADQQIATYL----PPNKNSGFTS-----------CAVSSS-GRYIFCGSDDNNV 1934 (2004)
Q Consensus 1873 afSPdg~--~LaSgS~DGtIrIWDLrtgk~i~t~~----~~~~~s~Its-----------LafSPd-G~~LaSGSsDGsI 1934 (2004)
.+-|+++ .+++...||.+.+|-.+......+.. .......+.+ ....|. ...++.--.+|.+
T Consensus 279 ~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~ 358 (1062)
T KOG1912|consen 279 DVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDS 358 (1062)
T ss_pred EeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhccccccceEEEeechhcccceeecCCCChhhhhhhhhcchh
Confidence 8888664 58999999999999865422211110 0000111222 222332 3334444457778
Q ss_pred EEEECCCCeeeEEE-------------------------------ccCCCCeEEEEEcC-----------CC-------C
Q psy8748 1935 HVWDLLKTTHNGVL-------------------------------SGHENRVTSISLSP-----------NG-------M 1965 (2004)
Q Consensus 1935 rIWDL~tge~l~tL-------------------------------~gHs~~VtsLaFSP-----------Dg-------~ 1965 (2004)
.+|.+.+++..... .+|....++....| .| .
T Consensus 359 ~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~p 438 (1062)
T KOG1912|consen 359 TFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTSLISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVP 438 (1062)
T ss_pred HHHhhhcCCcCcccccccccccccccccCceeehhhccccchhhcCCCCCCceeeecccCcccceeecCCCCCccceeee
Confidence 88887643321100 13555555544433 22 2
Q ss_pred EEEEEECCCeEEEEECCCCeEEEEEEeecCCCCccccc
Q psy8748 1966 ALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003 (2004)
Q Consensus 1966 ~LaSgS~DGtIrIWdlstg~l~k~Ik~~~~h~~~VtsV 2003 (2004)
++|.|...|+|.++|+.++.. .+.+..|.+.|.|+
T Consensus 439 LvAvGT~sGTV~vvdvst~~v---~~~fsvht~~Vkgl 473 (1062)
T KOG1912|consen 439 LVAVGTNSGTVDVVDVSTNAV---AASFSVHTSLVKGL 473 (1062)
T ss_pred eEEeecCCceEEEEEecchhh---hhhhcccccceeee
Confidence 578899999999999999843 44455666666554
No 286
>KOG0309|consensus
Probab=98.59 E-value=1.7e-07 Score=117.11 Aligned_cols=291 Identities=16% Similarity=0.157 Sum_probs=186.5
Q ss_pred CCCCeEEEEEccCCCEEEEeecCCCeEEEEEccCcccccchhhhcccceeeEeecccccccccccCccccccccCCCCcc
Q psy8748 1554 CKEQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSSI 1633 (2004)
Q Consensus 1554 Hk~~VtsVsFSPdGk~LASvGSsDGtIrIWDv~t~dlL~~t~l~d~~gr~lkt~~g~~~~V~s~~~~~f~~ll~spdgSi 1633 (2004)
-.+++.+|+.+|.|+-+|. ++.-|-.. -|... .++..+-+.-. .+..+.+..|++....
T Consensus 23 v~~~~~a~si~p~grdi~l-Asr~gl~i-~dld~------------p~~ppr~l~h~-------tpw~vad~qws~h~a~ 81 (1081)
T KOG0309|consen 23 VDGGFNAVSINPSGRDIVL-ASRQGLYI-IDLDD------------PFTPPRWLHHI-------TPWQVADVQWSPHPAK 81 (1081)
T ss_pred ecCcccceeeccccchhhh-hhhcCeEE-EeccC------------CCCCceeeecc-------CcchhcceecccCCCC
Confidence 4557999999999999998 66666543 34333 12222222211 1233344455555544
Q ss_pred hhhhhHhHHHHHHHHHHHHHHhHHHhhhhhccccccccCCCCCCCcccccccccccccccceeEEEEeCCC-CEEEEEeC
Q psy8748 1634 NIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDS-RHCVSGSL 1712 (2004)
Q Consensus 1634 di~i~~~~~ql~k~i~ql~s~l~~~~~~~~~~~~se~~~s~~~~~~lk~~pi~sL~GHt~~VtsLaFSPDG-~~LASGS~ 1712 (2004)
+.++..+..+- .+..- .... .... .-..+.||+.+|+++.|+|.. ..+++++-
T Consensus 82 ~~wiVsts~qk--aiiwn------------------lA~s--s~~a----Ief~lhghsraitd~n~~~q~pdVlatcsv 135 (1081)
T KOG0309|consen 82 PYWIVSTSNQK--AIIWN------------------LAKS--SSNA----IEFVLHGHSRAITDINFNPQHPDVLATCSV 135 (1081)
T ss_pred ceeEEecCcch--hhhhh------------------hhcC--Cccc----eEEEEecCccceeccccCCCCCcceeeccc
Confidence 55444442211 00000 0000 0011 134688999999999999854 47899999
Q ss_pred CCeEEEEECCCCc-eEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe
Q psy8748 1713 DGKLIIWDTWTGN-KTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI 1791 (2004)
Q Consensus 1713 DGtIrVWDl~Tgk-~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs 1791 (2004)
|..+..||+.+.. .+..+..-......+.|+-....+.+.+....|.+||.+.+. .....+.+|...+..+.|.
T Consensus 136 dt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i~vwd~r~gs-----~pl~s~K~~vs~vn~~~fn 210 (1081)
T KOG0309|consen 136 DTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDIFVWDLRKGS-----TPLCSLKGHVSSVNSIDFN 210 (1081)
T ss_pred cccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCceEEEeccCCC-----cceEEecccceeeehHHHh
Confidence 9999999998764 444444444556788998866666666677789999998753 5566677787788888776
Q ss_pred C--CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCC--EEEEEECCCeEEEEECC----------CCe
Q psy8748 1792 D--DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQ--YFVTGSVDKSCKLWDFR----------EKK 1857 (2004)
Q Consensus 1792 d--d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~--~LaSGS~DGsIrIWDlr----------s~k 1857 (2004)
. ...+.+++.||+|+.||................+|..-.+.|-|. ++.-.-.+..+.+++.+ ..+
T Consensus 211 r~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~ 290 (1081)
T KOG0309|consen 211 RFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNT 290 (1081)
T ss_pred hhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCceeEeccccCCeeeeeccccchhhhhccccCCc
Confidence 3 356899999999999998765443333334556677777777433 32222222344444433 235
Q ss_pred EEEEEecCCCCeEEEEEeCCC----------CEEEEEECCCeEEEEEcc
Q psy8748 1858 CVQTFFGHEADVNSVCFHPSG----------LAFATGSEDKTARLFDIR 1896 (2004)
Q Consensus 1858 ~I~tl~~h~s~ItsIafSPdg----------~~LaSgS~DGtIrIWDLr 1896 (2004)
++..+.+|.+.|..+.|-..+ -.|++.+.|.++++|-+.
T Consensus 291 pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~lrlWpI~ 339 (1081)
T KOG0309|consen 291 PVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTLRLWPID 339 (1081)
T ss_pred ceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCceEeeecc
Confidence 788999999988877775422 259999999999999875
No 287
>KOG0280|consensus
Probab=98.57 E-value=2.9e-06 Score=98.43 Aligned_cols=243 Identities=16% Similarity=0.157 Sum_probs=159.6
Q ss_pred cccceeEEEEeC---CCC-EEEEEeCCCeEEEEECCCCceEEEeeCCC------CceEEEEEecCCCEEEEeecCCeEEE
Q psy8748 1691 HINKVNSVHYSG---DSR-HCVSGSLDGKLIIWDTWTGNKTQVIPLRS------AWVMSVAFAQSGNFVACGGMDNMCTV 1760 (2004)
Q Consensus 1691 Ht~~VtsLaFSP---DG~-~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht------~~ItsLafSPdg~~LaSGS~DGtIrV 1760 (2004)
-+..+..+.|.. +|. .++-+..+|.|.++..........+.+-. ....++.|++.+..++++..+|.+.+
T Consensus 68 dts~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~ 147 (339)
T KOG0280|consen 68 DTSTEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISG 147 (339)
T ss_pred cccccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEE
Confidence 345677777762 455 45667778999999765544444443211 12457789999999999999999986
Q ss_pred EEcCCCCCCCcceEEEEEecCccceeeeEEe--CCCcEEEeecCCeEEEEECC-CCceeEEeeccccCCeEEEEECC-CC
Q psy8748 1761 YDLNNRDSTGAAKVIRELLGYEGFLSSCRFI--DDTTLLTGSGDMKIVTWNLE-TGQRIHEVAQAHIGDVVSISLSP-DG 1836 (2004)
Q Consensus 1761 WDl~t~~~~~~~k~i~sl~gh~~~Vssvafs--dd~~LlSgS~DGtI~IWDl~-tg~~i~~il~~h~~~ItsLafSP-dg 1836 (2004)
-+.... ..+.......|+-....+.|+ ..+.+++|++||.+..||++ .++.+..-.+.|...|.+|.-+| .+
T Consensus 148 v~~t~~----~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~ 223 (339)
T KOG0280|consen 148 VYETEM----VLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKP 223 (339)
T ss_pred Eeccee----eeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCC
Confidence 554432 233444677888888888887 44679999999999999999 45555554567888999998887 57
Q ss_pred CEEEEEECCCeEEEEECCC-CeEEEEEecCCCCeEEEEEeCCC--CEEEEEECCCeEEEEEccCCcee---EEEcCCCCC
Q psy8748 1837 QYFVTGSVDKSCKLWDFRE-KKCVQTFFGHEADVNSVCFHPSG--LAFATGSEDKTARLFDIRADQQI---ATYLPPNKN 1910 (2004)
Q Consensus 1837 ~~LaSGS~DGsIrIWDlrs-~k~I~tl~~h~s~ItsIafSPdg--~~LaSgS~DGtIrIWDLrtgk~i---~t~~~~~~~ 1910 (2004)
.++++|+.|-.|++||.++ ++++..- .-.+.|+.+.++|.- ..++++-.+| .+|-+...+... .......|.
T Consensus 224 ~~I~TGsYDe~i~~~DtRnm~kPl~~~-~v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~~~~~~~e~~~~~~s~~~hd 301 (339)
T KOG0280|consen 224 TYIATGSYDECIRVLDTRNMGKPLFKA-KVGGGVWRIKHHPEIFHRLLAACMHNG-AKILDSSDKVLEFQIVLPSDKIHD 301 (339)
T ss_pred ceEEEeccccceeeeehhcccCccccC-ccccceEEEEecchhhhHHHHHHHhcC-ceEEEecccccchheeeecccccc
Confidence 7999999999999999984 4554433 335889999999943 2344443343 667666544332 111122333
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCCeEE-EEEC
Q psy8748 1911 SGFTSCAVSSSGRYIFCGS-DDNNVH-VWDL 1939 (2004)
Q Consensus 1911 s~ItsLafSPdG~~LaSGS-sDGsIr-IWDL 1939 (2004)
+-+..-.|.....++++++ .|..++ +|-.
T Consensus 302 Sl~YG~DWd~~~~~lATCsFYDk~~~~~Wl~ 332 (339)
T KOG0280|consen 302 SLCYGGDWDSKDSFLATCSFYDKKIRQLWLH 332 (339)
T ss_pred ceeeccccccccceeeeeeccccceeeeeee
Confidence 3333344443345567654 344433 5543
No 288
>KOG1832|consensus
Probab=98.53 E-value=8.7e-08 Score=120.99 Aligned_cols=265 Identities=14% Similarity=0.233 Sum_probs=186.2
Q ss_pred cccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCC--eE
Q psy8748 1681 KLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDN--MC 1758 (2004)
Q Consensus 1681 k~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DG--tI 1758 (2004)
.+++.++++.|+..-+|++|+.+.++|+.|+..|.|+++++.+|.......+|..+|+-+.-+.+|..+++.+.-. -.
T Consensus 1090 RFr~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~Pls 1169 (1516)
T KOG1832|consen 1090 RFRSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLS 1169 (1516)
T ss_pred hcccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchH
Confidence 5678889999999999999999999999999999999999999999999999999999999999999777665433 46
Q ss_pred EEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCc-EEEeecCCeEEEEECCCCceeEEeecc---ccCCeEEEEECC
Q psy8748 1759 TVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTT-LLTGSGDMKIVTWNLETGQRIHEVAQA---HIGDVVSISLSP 1834 (2004)
Q Consensus 1759 rVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~-LlSgS~DGtI~IWDl~tg~~i~~il~~---h~~~ItsLafSP 1834 (2004)
.+|+...- +.....+ ..-.++.|++... -+.|+......+||+.++..+.+++.+ ....-.+..|+|
T Consensus 1170 aLW~~~s~-----~~~~Hsf----~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP 1240 (1516)
T KOG1832|consen 1170 ALWDASST-----GGPRHSF----DEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSP 1240 (1516)
T ss_pred HHhccccc-----cCccccc----cccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCC
Confidence 78987541 1222222 2234566765543 445666678899999999877654322 122236788999
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeE
Q psy8748 1835 DGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFT 1914 (2004)
Q Consensus 1835 dg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~It 1914 (2004)
+..+++ .|| .+||++..+.++.|......+ .-.|+|+|+.++..+ .|||+++.+.+.....-. -.
T Consensus 1241 ~D~LIl---ndG--vLWDvR~~~aIh~FD~ft~~~-~G~FHP~g~eVIINS-----EIwD~RTF~lLh~VP~Ld----qc 1305 (1516)
T KOG1832|consen 1241 CDTLIL---NDG--VLWDVRIPEAIHRFDQFTDYG-GGGFHPSGNEVIINS-----EIWDMRTFKLLHSVPSLD----QC 1305 (1516)
T ss_pred CcceEe---eCc--eeeeeccHHHHhhhhhheecc-cccccCCCceEEeec-----hhhhhHHHHHHhcCcccc----ce
Confidence 888765 355 589999888777775544322 335999999988876 489999988876653222 35
Q ss_pred EEEEcCCCCEEEEEeC------C-----------CeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEE
Q psy8748 1915 SCAVSSSGRYIFCGSD------D-----------NNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTS 1970 (2004)
Q Consensus 1915 sLafSPdG~~LaSGSs------D-----------GsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSg 1970 (2004)
.+.|+..|+.++..-. | ...+-+|......+.++.+ ...|.+++-.+...++..-
T Consensus 1306 ~VtFNstG~VmYa~~~~~d~~sdvh~~r~k~p~fSSFRTf~a~dYs~iaTi~v-~R~~~Dlct~~~D~~l~vI 1377 (1516)
T KOG1832|consen 1306 AVTFNSTGDVMYAMLNIEDVMSDVHTRRVKHPLFSSFRTFDAIDYSDIATIPV-DRCLLDLCTEPTDSFLGVI 1377 (1516)
T ss_pred EEEeccCccchhhhhhhhhhhhhhcccccccchhhhhccccccccccceeeec-ccchhhhhcCCccceEEEE
Confidence 6788888887665430 0 1233444444555555543 3345666666666666554
No 289
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.53 E-value=0.00013 Score=85.65 Aligned_cols=219 Identities=17% Similarity=0.140 Sum_probs=145.6
Q ss_pred EEEEec-CCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCcee
Q psy8748 1739 SVAFAQ-SGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRI 1816 (2004)
Q Consensus 1739 sLafSP-dg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i 1816 (2004)
+++|.+ ++.++++--..+.|..|+..++. ...... .. ...+.+. +++.++++...+. .++|..+++..
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~-------~~~~~~-~~-~~G~~~~~~~g~l~v~~~~~~-~~~d~~~g~~~ 73 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGE-------VEVIDL-PG-PNGMAFDRPDGRLYVADSGGI-AVVDPDTGKVT 73 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTE-------EEEEES-SS-EEEEEEECTTSEEEEEETTCE-EEEETTTTEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCe-------EEEEec-CC-CceEEEEccCCEEEEEEcCce-EEEecCCCcEE
Confidence 678998 67777777778999999987642 111221 12 5555555 6777877776554 55599888654
Q ss_pred EEeec---c-ccCCeEEEEECCCCCEEEEEECC--------CeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEE-E
Q psy8748 1817 HEVAQ---A-HIGDVVSISLSPDGQYFVTGSVD--------KSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFA-T 1883 (2004)
Q Consensus 1817 ~~il~---~-h~~~ItsLafSPdg~~LaSGS~D--------GsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~La-S 1883 (2004)
..... . .......+++.++|++.++.... |.|..++.. ++..... ..-...+.|+|+|+++.|+ +
T Consensus 74 ~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~-~~~~~pNGi~~s~dg~~lyv~ 151 (246)
T PF08450_consen 74 VLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVA-DGLGFPNGIAFSPDGKTLYVA 151 (246)
T ss_dssp EEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEE-EEESSEEEEEEETTSSEEEEE
T ss_pred EEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEe-cCcccccceEECCcchheeec
Confidence 32221 1 34567889999999966665533 568888877 5543333 3355678999999998776 5
Q ss_pred EECCCeEEEEEccCCce----eEEE-cCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEE
Q psy8748 1884 GSEDKTARLFDIRADQQ----IATY-LPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSI 1958 (2004)
Q Consensus 1884 gS~DGtIrIWDLrtgk~----i~t~-~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsL 1958 (2004)
-+..+.|..|++..... ...+ .........-.++++.+|++.++....+.|.++|.. |+.+..+......++++
T Consensus 152 ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~ 230 (246)
T PF08450_consen 152 DSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNC 230 (246)
T ss_dssp ETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEE
T ss_pred ccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEE
Confidence 56678899999864322 1222 112222346789999999998888889999999976 88888887666689999
Q ss_pred EEc-CCCCEEEEE
Q psy8748 1959 SLS-PNGMALVTS 1970 (2004)
Q Consensus 1959 aFS-PDg~~LaSg 1970 (2004)
+|. ++.+.|+..
T Consensus 231 ~fgg~~~~~L~vT 243 (246)
T PF08450_consen 231 AFGGPDGKTLYVT 243 (246)
T ss_dssp EEESTTSSEEEEE
T ss_pred EEECCCCCEEEEE
Confidence 994 565555544
No 290
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.51 E-value=7e-05 Score=86.35 Aligned_cols=221 Identities=17% Similarity=0.121 Sum_probs=139.8
Q ss_pred CCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC
Q psy8748 1755 DNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP 1834 (2004)
Q Consensus 1755 DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP 1834 (2004)
+|.|..||..+++.... ..+........+.....++.+++++.++.++.||..+|+.+.+...... +.... ..
T Consensus 2 ~g~l~~~d~~tG~~~W~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~~--~~~~~-~~ 74 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWS----YDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPGP--ISGAP-VV 74 (238)
T ss_dssp TSEEEEEETTTTEEEEE----EECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEECSSC--GGSGE-EE
T ss_pred CCEEEEEECCCCCEEEE----EECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeecccc--cccee-ee
Confidence 57788888866532111 1111111222222444677888889999999999999998766643211 11111 12
Q ss_pred CCCEEEEEECCCeEEEEECCCCeEEEEE-ecCCC---CeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCC
Q psy8748 1835 DGQYFVTGSVDKSCKLWDFREKKCVQTF-FGHEA---DVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKN 1910 (2004)
Q Consensus 1835 dg~~LaSGS~DGsIrIWDlrs~k~I~tl-~~h~s---~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~ 1910 (2004)
.+..+++++.++.++.+|..+++.+... ..... .........++..++++..+|.|..+|.++|+.+.........
T Consensus 75 ~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~ 154 (238)
T PF13360_consen 75 DGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPR 154 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-
T ss_pred cccccccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCC
Confidence 4567788888999999999999988874 33211 1122233334778888988999999999999998888553322
Q ss_pred C--C------eEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1911 S--G------FTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1911 s--~------ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
. . +..-....++ .+++++.+|.+.-+|+.+++.+.... ...+... ...++..|+.++.||.|..||+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~~--~~~~~~~-~~~~~~~l~~~~~~~~l~~~d~~ 230 (238)
T PF13360_consen 155 GSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWSKP--ISGIYSL-PSVDGGTLYVTSSDGRLYALDLK 230 (238)
T ss_dssp SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEEEC--SS-ECEC-EECCCTEEEEEETTTEEEEEETT
T ss_pred CCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEEec--CCCccCC-ceeeCCEEEEEeCCCEEEEEECC
Confidence 1 1 1222222344 77777778854444999999765333 2223321 34677788888899999999999
Q ss_pred CCeE
Q psy8748 1983 NTIV 1986 (2004)
Q Consensus 1983 tg~l 1986 (2004)
+|+.
T Consensus 231 tG~~ 234 (238)
T PF13360_consen 231 TGKV 234 (238)
T ss_dssp TTEE
T ss_pred CCCE
Confidence 9863
No 291
>KOG2314|consensus
Probab=98.44 E-value=3.6e-05 Score=95.08 Aligned_cols=224 Identities=14% Similarity=0.150 Sum_probs=134.4
Q ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecC-----CeEEEEEcCCCCCCCc
Q psy8748 1697 SVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMD-----NMCTVYDLNNRDSTGA 1771 (2004)
Q Consensus 1697 sLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~D-----GtIrVWDl~t~~~~~~ 1771 (2004)
-+.||.|++|+|--.. ..|.||+..+...+..-...-..|....|+|.++.|+--.-. ..+.+-.+.+++
T Consensus 310 ~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~~parvtL~evPs~~---- 384 (698)
T KOG2314|consen 310 IFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNNIPARVTLMEVPSKR---- 384 (698)
T ss_pred eEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccCCcceEEEEecCccc----
Confidence 4689999999997766 469999977655444333445678899999998877643211 233444443321
Q ss_pred ceEEEEEecCccceeeeEEeC-CCcEEEe----------ecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEE
Q psy8748 1772 AKVIRELLGYEGFLSSCRFID-DTTLLTG----------SGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFV 1840 (2004)
Q Consensus 1772 ~k~i~sl~gh~~~Vssvafsd-d~~LlSg----------S~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~La 1840 (2004)
.+++..-+.-.-..+.|-. +.+|+.- +.-..+.|+.++........ ..-...|...+|-|.|+.++
T Consensus 385 --~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~-velke~vi~FaWEP~gdkF~ 461 (698)
T KOG2314|consen 385 --EIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEV-VELKESVIAFAWEPHGDKFA 461 (698)
T ss_pred --eeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEeeccCCCcee-eecchheeeeeeccCCCeEE
Confidence 1222111111112233333 3333221 11123455555554433222 24456788999999999887
Q ss_pred EEEC---CCeEEEEECCC-C---eEEEEEecCCCCeEEEEEeCCCCEEEEEE---CCCeEEEEEccCCceeEEEcCCCCC
Q psy8748 1841 TGSV---DKSCKLWDFRE-K---KCVQTFFGHEADVNSVCFHPSGLAFATGS---EDKTARLFDIRADQQIATYLPPNKN 1910 (2004)
Q Consensus 1841 SGS~---DGsIrIWDlrs-~---k~I~tl~~h~s~ItsIafSPdg~~LaSgS---~DGtIrIWDLrtgk~i~t~~~~~~~ 1910 (2004)
+-+. ..++.+|.+++ . ..+..+. ....+.+.|+|.|++++++. ..|.+.++|+.......+- ...|
T Consensus 462 vi~g~~~k~tvsfY~~e~~~~~~~lVk~~d--k~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~a~~k~~~-~~eh- 537 (698)
T KOG2314|consen 462 VISGNTVKNTVSFYAVETNIKKPSLVKELD--KKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDYADLKDTA-SPEH- 537 (698)
T ss_pred EEEccccccceeEEEeecCCCchhhhhhhc--ccccceEEEcCCCcEEEEEEecccccceEEEecchhhhhhcc-Cccc-
Confidence 7653 24688888763 2 2233332 24567899999999987754 4788999998742322221 1222
Q ss_pred CCeEEEEEcCCCCEEEEEeCCC
Q psy8748 1911 SGFTSCAVSSSGRYIFCGSDDN 1932 (2004)
Q Consensus 1911 s~ItsLafSPdG~~LaSGSsDG 1932 (2004)
...+.+.|+|.|+|+++++.-+
T Consensus 538 ~~at~veWDPtGRYvvT~ss~w 559 (698)
T KOG2314|consen 538 FAATEVEWDPTGRYVVTSSSSW 559 (698)
T ss_pred cccccceECCCCCEEEEeeehh
Confidence 4567899999999999998643
No 292
>KOG4190|consensus
Probab=98.44 E-value=7.3e-07 Score=108.16 Aligned_cols=250 Identities=17% Similarity=0.218 Sum_probs=172.7
Q ss_pred EEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCC-CCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeE
Q psy8748 1727 TQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNR-DSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKI 1805 (2004)
Q Consensus 1727 l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~-~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI 1805 (2004)
+..+.+|...|+.++--.+.+-+++++.|.+|++|.++.. +..+...+..++..|...+..+.|..+.+.+ ++.||.|
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i-~ScD~gi 806 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSI-ASCDGGI 806 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeecccee-eeccCcc
Confidence 3456789999998888778899999999999999999753 2334455677888999999999998665433 4557889
Q ss_pred EEEECCCCceeEEeec-cccCCeEEEEECC--CCCEEEEE-ECCCeEEEEECCCCeEEEEEe-----cCCCCeEEEEEeC
Q psy8748 1806 VTWNLETGQRIHEVAQ-AHIGDVVSISLSP--DGQYFVTG-SVDKSCKLWDFREKKCVQTFF-----GHEADVNSVCFHP 1876 (2004)
Q Consensus 1806 ~IWDl~tg~~i~~il~-~h~~~ItsLafSP--dg~~LaSG-S~DGsIrIWDlrs~k~I~tl~-----~h~s~ItsIafSP 1876 (2004)
.+||.--+..+..+.. ...+.+..+..-+ +...++.| +...+|+++|.+..+....++ +...-+++++..+
T Consensus 807 HlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~ 886 (1034)
T KOG4190|consen 807 HLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVAD 886 (1034)
T ss_pred eeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEecc
Confidence 9999987776543321 1222233333333 34444444 678899999999887655553 3456689999999
Q ss_pred CCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEE-EECCCCeeeEEEccCCCCe
Q psy8748 1877 SGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHV-WDLLKTTHNGVLSGHENRV 1955 (2004)
Q Consensus 1877 dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrI-WDL~tge~l~tL~gHs~~V 1955 (2004)
.|++++++-.+|.|.+.|.++|+.+..+.+.. .....++ .|....++....|.++.+ |....+......+....+.
T Consensus 887 ~GN~lAa~LSnGci~~LDaR~G~vINswrpme--cdllqla-apsdq~L~~saldHslaVnWhaldgimh~q~kpppepa 963 (1034)
T KOG4190|consen 887 KGNKLAAALSNGCIAILDARNGKVINSWRPME--CDLLQLA-APSDQALAQSALDHSLAVNWHALDGIMHLQDKPPPEPA 963 (1034)
T ss_pred CcchhhHHhcCCcEEEEecCCCceeccCCccc--chhhhhc-CchhHHHHhhcccceeEeeehhcCCeeeeccCCCCcch
Confidence 99999999999999999999999887774332 2233333 355667777777888888 8876665554443222221
Q ss_pred EEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1956 TSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1956 tsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
.- .-.-|.-++++.....+.+|.-.
T Consensus 964 hf--lqsvgpSLV~a~~Gn~lgVYad~ 988 (1034)
T KOG4190|consen 964 HF--LQSVGPSLVTAQNGNILGVYADS 988 (1034)
T ss_pred hh--hhccCceeEEeccCcEEEEEecc
Confidence 11 11235567777777777777543
No 293
>KOG0882|consensus
Probab=98.44 E-value=4.1e-06 Score=101.21 Aligned_cols=282 Identities=16% Similarity=0.203 Sum_probs=195.2
Q ss_pred cccceeEEEEeCCCCEEEEEeCCCeEEEEECCC--C-ceEEEeeCCCCceEEEEEecCCCEEEEeec-CCeEEEEEcCCC
Q psy8748 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWT--G-NKTQVIPLRSAWVMSVAFAQSGNFVACGGM-DNMCTVYDLNNR 1766 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~LASGS~DGtIrVWDl~T--g-k~l~ti~~Ht~~ItsLafSPdg~~LaSGS~-DGtIrVWDl~t~ 1766 (2004)
|.+-|+.+.-. ..+++.+++.||.++.|.-.. | +.+..+..|-+.|.+++.+-++..+.+++. |..++++|+.+-
T Consensus 8 hrd~i~hv~~t-ka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~ 86 (558)
T KOG0882|consen 8 HRDVITHVFPT-KAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF 86 (558)
T ss_pred ccceeeeEeee-hhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence 77778777654 456999999999999997433 1 334455678889999999999999999887 999999999864
Q ss_pred CCCCcceEEEEEecCccceeeeEEeCCC---cE-EEeecCCeEEEEECCCCc-eeEEeeccccCCeEEEEECCCCCEEEE
Q psy8748 1767 DSTGAAKVIRELLGYEGFLSSCRFIDDT---TL-LTGSGDMKIVTWNLETGQ-RIHEVAQAHIGDVVSISLSPDGQYFVT 1841 (2004)
Q Consensus 1767 ~~~~~~k~i~sl~gh~~~Vssvafsdd~---~L-lSgS~DGtI~IWDl~tg~-~i~~il~~h~~~ItsLafSPdg~~LaS 1841 (2004)
+.... ..+....+.+.++ ..++. .+ +..-.+|.+.++|-..+. .......-|..+|.++.+.+-+..+++
T Consensus 87 Dminm----iKL~~lPg~a~wv-~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vS 161 (558)
T KOG0882|consen 87 DMINM----IKLVDLPGFAEWV-TSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVS 161 (558)
T ss_pred chhhh----cccccCCCceEEe-cCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceee
Confidence 32111 1111122222222 12221 22 334467999999987655 333445568899999999999999999
Q ss_pred EECCCeEEEEECCC------CeE---------EEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcC
Q psy8748 1842 GSVDKSCKLWDFRE------KKC---------VQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLP 1906 (2004)
Q Consensus 1842 GS~DGsIrIWDlrs------~k~---------I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~ 1906 (2004)
....|.|..|.... .+. +..+........++.|+|+|..+.+-+.|.+|++++.++|+.+..+..
T Consensus 162 iD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiDE 241 (558)
T KOG0882|consen 162 IDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEIDE 241 (558)
T ss_pred ccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhhc
Confidence 99999999998762 111 111223455678999999999999999999999999999876554411
Q ss_pred C-------------------------------CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCC---
Q psy8748 1907 P-------------------------------NKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHE--- 1952 (2004)
Q Consensus 1907 ~-------------------------------~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs--- 1952 (2004)
. .....-+.+.|+..|++|+.|+-=| |++.++.++++.+.+....
T Consensus 242 ~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~gk~e~ir 320 (558)
T KOG0882|consen 242 VLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRILGKDEAIR 320 (558)
T ss_pred cchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEeccchhhh
Confidence 0 0011235678999999999998776 8999999988877663111
Q ss_pred ---------------CCe-------EEEEEcCCCCEEEEEECCCeEEEE
Q psy8748 1953 ---------------NRV-------TSISLSPNGMALVTSSWDQFVKVW 1979 (2004)
Q Consensus 1953 ---------------~~V-------tsLaFSPDg~~LaSgS~DGtIrIW 1979 (2004)
..+ -.+.+.+|...++++-....+++|
T Consensus 321 ~~~~sl~q~~~k~~~~~~~~~a~~np~~~~~~dpt~~c~a~kk~rfylf 369 (558)
T KOG0882|consen 321 FTRLSLYQGAQKSNLAALEVAASNNPLLEFQKDPTIVCTAFKKNRFYLF 369 (558)
T ss_pred hhhHHHHhhhhhccchhhhhhhccCcccccCCCCeEEEeeeecceEEEE
Confidence 000 112255566667777777778877
No 294
>KOG1912|consensus
Probab=98.42 E-value=9.4e-06 Score=102.82 Aligned_cols=283 Identities=18% Similarity=0.164 Sum_probs=191.6
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCC------------CEEEEeecCCeEE
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSG------------NFVACGGMDNMCT 1759 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg------------~~LaSGS~DGtIr 1759 (2004)
...-.++.|+|.| ++|-|+ ...|.|-|..+-+.++.+..|...|+.+.|.|-. -.|+++...|.|.
T Consensus 15 ~sN~~A~Dw~~~G-LiAygs-hslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIi 92 (1062)
T KOG1912|consen 15 RSNRNAADWSPSG-LIAYGS-HSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRII 92 (1062)
T ss_pred cccccccccCccc-eEEEec-CceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEE
Confidence 3346688999877 566665 4579999999999999999999999999997631 2577888889999
Q ss_pred EEEcCCCCCCCcceEEEEEecCccceeeeEEe---CC--CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC
Q psy8748 1760 VYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI---DD--TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP 1834 (2004)
Q Consensus 1760 VWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs---dd--~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP 1834 (2004)
+||+... ..+..+..+.+.+..++|. ++ ..+++-.....+.+|+..+|+...+...+ .....|+.++|
T Consensus 93 l~d~~~~------s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys-~~iLs~f~~DP 165 (1062)
T KOG1912|consen 93 LVDFVLA------SVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYS-HEILSCFRVDP 165 (1062)
T ss_pred EEEehhh------hhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccC-CcceeeeeeCC
Confidence 9999754 3444556677777778776 22 34777788899999999999988766433 34567799999
Q ss_pred -CCCEEEEEECCCeEEEEECCC-------CeEEEEEecCCC----------------C---------eEEEEEeCCCCEE
Q psy8748 1835 -DGQYFVTGSVDKSCKLWDFRE-------KKCVQTFFGHEA----------------D---------VNSVCFHPSGLAF 1881 (2004)
Q Consensus 1835 -dg~~LaSGS~DGsIrIWDlrs-------~k~I~tl~~h~s----------------~---------ItsIafSPdg~~L 1881 (2004)
|.+.+..-+..|.+.+.+.-. ++..+.-..|.+ . ...++|+|.-+.+
T Consensus 166 fd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~faf~p~~rn~ 245 (1062)
T KOG1912|consen 166 FDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQFAFSPHWRNI 245 (1062)
T ss_pred CCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhhhcChhhhce
Confidence 777788888888888776531 222222222211 0 1135678865555
Q ss_pred EEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEECCCC----------------e
Q psy8748 1882 ATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSS--GRYIFCGSDDNNVHVWDLLKT----------------T 1943 (2004)
Q Consensus 1882 aSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPd--G~~LaSGSsDGsIrIWDL~tg----------------e 1943 (2004)
+.......+.++|++-..++.....+. +.+..+.+-|+ ...++++..||.+.+|-.+.. +
T Consensus 246 lfi~~prellv~dle~~~~l~vvpier--~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~l~~dl~~ 323 (1062)
T KOG1912|consen 246 LFITFPRELLVFDLEYECCLAVVPIER--GGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNASLSMDLGE 323 (1062)
T ss_pred EEEEeccceEEEcchhhceeEEEEecc--CCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchhhcccccc
Confidence 555667889999999888887775444 34555666665 467999999999999976441 1
Q ss_pred eeEEEcc-CCCCeEEEEEcCC-CCEEEEEECCCeEEEEECCCCe
Q psy8748 1944 HNGVLSG-HENRVTSISLSPN-GMALVTSSWDQFVKVWQESNTI 1985 (2004)
Q Consensus 1944 ~l~tL~g-Hs~~VtsLaFSPD-g~~LaSgS~DGtIrIWdlstg~ 1985 (2004)
....+.. .+..+......|. ...++.--.+|.+.+|.+.+|+
T Consensus 324 Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~r 367 (1062)
T KOG1912|consen 324 QVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGR 367 (1062)
T ss_pred ceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCC
Confidence 1111111 1112223333443 3334444557888999988653
No 295
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.42 E-value=0.00017 Score=91.54 Aligned_cols=173 Identities=14% Similarity=0.109 Sum_probs=108.8
Q ss_pred eEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEE-CC--CeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCE
Q psy8748 1804 KIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGS-VD--KSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLA 1880 (2004)
Q Consensus 1804 tI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS-~D--GsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~ 1880 (2004)
.|+++|+.+++... +. ...+......|+|||+.++... .+ ..|+++|+..+.. ..+..+........|+|||+.
T Consensus 214 ~Iyv~dl~tg~~~~-lt-~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~ 290 (419)
T PRK04043 214 TLYKYNLYTGKKEK-IA-SSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKR 290 (419)
T ss_pred EEEEEECCCCcEEE-Ee-cCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCE
Confidence 35555665554432 11 2344455678999998776543 23 4688889877764 334333333345689999998
Q ss_pred EEEEEC-CC--eEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCC---------CeEEEEECCCCeeeEEE
Q psy8748 1881 FATGSE-DK--TARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDD---------NNVHVWDLLKTTHNGVL 1948 (2004)
Q Consensus 1881 LaSgS~-DG--tIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsD---------GsIrIWDL~tge~l~tL 1948 (2004)
++..+. .| .|.++|+.+++...... .+. . ...|+|+|++++..... ..|.+.|+.++... .+
T Consensus 291 I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~-~g~-~---~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~-~L 364 (419)
T PRK04043 291 IVFVSDRLGYPNIFMKKLNSGSVEQVVF-HGK-N---NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIR-RL 364 (419)
T ss_pred EEEEECCCCCceEEEEECCCCCeEeCcc-CCC-c---CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeE-EC
Confidence 777663 23 58888888776533321 121 1 24899999998876643 36888898877643 34
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEECC---CeEEEEECCCCeE
Q psy8748 1949 SGHENRVTSISLSPNGMALVTSSWD---QFVKVWQESNTIV 1986 (2004)
Q Consensus 1949 ~gHs~~VtsLaFSPDg~~LaSgS~D---GtIrIWdlstg~l 1986 (2004)
... +......|+|||+.++..+.+ ..+.+.++++...
T Consensus 365 T~~-~~~~~p~~SPDG~~I~f~~~~~~~~~L~~~~l~g~~~ 404 (419)
T PRK04043 365 TAN-GVNQFPRFSSDGGSIMFIKYLGNQSALGIIRLNYNKS 404 (419)
T ss_pred CCC-CCcCCeEECCCCCEEEEEEccCCcEEEEEEecCCCee
Confidence 322 233468899999988776543 2477778877643
No 296
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.42 E-value=0.00017 Score=87.93 Aligned_cols=172 Identities=16% Similarity=0.190 Sum_probs=132.5
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCC-eEEEEEcCCCCCCCcceEEEEEecC
Q psy8748 1703 DSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDN-MCTVYDLNNRDSTGAAKVIRELLGY 1781 (2004)
Q Consensus 1703 DG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DG-tIrVWDl~t~~~~~~~k~i~sl~gh 1781 (2004)
+|.+++..+. |...|.+...+-.++ -+|.+.|.-..+..+++-++.|..|| .+-+++.+++ ..+.+.+.
T Consensus 331 ~Gd~ia~VSR-GkaFi~~~~~~~~iq--v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~-------e~kr~e~~ 400 (668)
T COG4946 331 NGDYIALVSR-GKAFIMRPWDGYSIQ--VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGG-------EVKRIEKD 400 (668)
T ss_pred CCcEEEEEec-CcEEEECCCCCeeEE--cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCc-------eEEEeeCC
Confidence 7888888875 778888776665554 24666788888888888999999999 9999999764 24455666
Q ss_pred ccceeeeEEeCCCc-EEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCC----eEEEEECCCC
Q psy8748 1782 EGFLSSCRFIDDTT-LLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDK----SCKLWDFREK 1856 (2004)
Q Consensus 1782 ~~~Vssvafsdd~~-LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DG----sIrIWDlrs~ 1856 (2004)
-+.|.++..++++. ++++.....+.++|+++|... .+-+...+-|+.+.|||++++++-+--+| .|+++|+..+
T Consensus 401 lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~-~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~ 479 (668)
T COG4946 401 LGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVR-LIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGG 479 (668)
T ss_pred ccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCee-EecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCC
Confidence 77888888887654 777888899999999999865 44456677899999999999999887776 5999999988
Q ss_pred eEEEEEecCCCCeEEEEEeCCCCEEEEEEC
Q psy8748 1857 KCVQTFFGHEADVNSVCFHPSGLAFATGSE 1886 (2004)
Q Consensus 1857 k~I~tl~~h~s~ItsIafSPdg~~LaSgS~ 1886 (2004)
+..... ...+.=.+-+|.|+++++..-+.
T Consensus 480 Kiy~vT-T~ta~DfsPaFD~d~ryLYfLs~ 508 (668)
T COG4946 480 KIYDVT-TPTAYDFSPAFDPDGRYLYFLSA 508 (668)
T ss_pred eEEEec-CCcccccCcccCCCCcEEEEEec
Confidence 765443 33333456678899998776553
No 297
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.42 E-value=5.6e-06 Score=96.01 Aligned_cols=248 Identities=17% Similarity=0.265 Sum_probs=165.3
Q ss_pred cccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCc-----eEEEeeCCC------------CceEEEEEecCC--CEEEE
Q psy8748 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGN-----KTQVIPLRS------------AWVMSVAFAQSG--NFVAC 1751 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk-----~l~ti~~Ht------------~~ItsLafSPdg--~~LaS 1751 (2004)
..+.|+++.|...|.|+++|...|.|.+|.-.... ....+++|. ..|..+.|..++ ..++.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 34689999999999999999999999999644322 122345553 358888897654 36677
Q ss_pred eecCCeEEEEEcCCCCC----------------C----C-----------cceEE-----EEE-ecCccceeeeEEeCCC
Q psy8748 1752 GGMDNMCTVYDLNNRDS----------------T----G-----------AAKVI-----REL-LGYEGFLSSCRFIDDT 1794 (2004)
Q Consensus 1752 GS~DGtIrVWDl~t~~~----------------~----~-----------~~k~i-----~sl-~gh~~~Vssvafsdd~ 1794 (2004)
.+.|.+|++|.+..... . . ....+ +.. ..|.-.+.++.+..+.
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~ 184 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK 184 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence 77899999999865310 0 0 00000 111 2355667778888787
Q ss_pred cEEEeecCCeEEEEECCCCceeEEee--ccc-----cCCeEEEEECCC-CCEEEEEECCCeEEEEECCCCeE--------
Q psy8748 1795 TLLTGSGDMKIVTWNLETGQRIHEVA--QAH-----IGDVVSISLSPD-GQYFVTGSVDKSCKLWDFREKKC-------- 1858 (2004)
Q Consensus 1795 ~LlSgS~DGtI~IWDl~tg~~i~~il--~~h-----~~~ItsLafSPd-g~~LaSGS~DGsIrIWDlrs~k~-------- 1858 (2004)
..+....|-.|.+|+++-......+. +.| ..-|++..|+|. .+.+.-.+..|.|++-|+++...
T Consensus 185 et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~klf 264 (460)
T COG5170 185 ETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKLF 264 (460)
T ss_pred heeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhhh
Confidence 77888889999999987544332332 222 235788899994 45667777889999999984321
Q ss_pred --------EEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCce-eEEEcCCC----------CCCCe---EEE
Q psy8748 1859 --------VQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQ-IATYLPPN----------KNSGF---TSC 1916 (2004)
Q Consensus 1859 --------I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~-i~t~~~~~----------~~s~I---tsL 1916 (2004)
..-+.+-...|..+.|+++|+++++-+. -+|++||.+..+. +.++..+. ....| ..+
T Consensus 265 e~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFei 343 (460)
T COG5170 265 ELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFEI 343 (460)
T ss_pred hhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEEE
Confidence 0111223356888999999999887654 5799999986543 44431111 01122 357
Q ss_pred EEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1917 AVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1917 afSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
.|+-|.+.+.+|+..+..-+|-+
T Consensus 344 sfSgd~~~v~sgsy~NNfgiyp~ 366 (460)
T COG5170 344 SFSGDDKHVLSGSYSNNFGIYPT 366 (460)
T ss_pred EecCCcccccccccccceeeecc
Confidence 88888899999988887777764
No 298
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.40 E-value=5.7e-05 Score=88.33 Aligned_cols=241 Identities=12% Similarity=0.125 Sum_probs=141.0
Q ss_pred EEEEeCCCCEEEEEeCCCeEEEEECCCC--ceEEEee---CCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCc
Q psy8748 1697 SVHYSGDSRHCVSGSLDGKLIIWDTWTG--NKTQVIP---LRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGA 1771 (2004)
Q Consensus 1697 sLaFSPDG~~LASGS~DGtIrVWDl~Tg--k~l~ti~---~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~ 1771 (2004)
.++.+.||+.||.. .|..|.|-..++. ..+.... .....=+-++|+||+..|+.+...|+|++||+...... .
T Consensus 2 ~~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~lf-~ 79 (282)
T PF15492_consen 2 HLALSSDGKLLAIL-QDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSELF-V 79 (282)
T ss_pred ceeecCCCcEEEEE-eccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccceeE-E
Confidence 35677899988877 4667777655442 2222222 22233578999999999999999999999999753211 0
Q ss_pred ceEEEEE-ecCccceeeeEEeCCC-------cEEEeecCCeEEEEECCCC--c---eeE--EeeccccCCeEEEEECCCC
Q psy8748 1772 AKVIREL-LGYEGFLSSCRFIDDT-------TLLTGSGDMKIVTWNLETG--Q---RIH--EVAQAHIGDVVSISLSPDG 1836 (2004)
Q Consensus 1772 ~k~i~sl-~gh~~~Vssvafsdd~-------~LlSgS~DGtI~IWDl~tg--~---~i~--~il~~h~~~ItsLafSPdg 1836 (2004)
....... ......|..+.|.+.. .+++-..+|.++-|-+..+ + ..+ .+...+...|.++.++|..
T Consensus 80 I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h 159 (282)
T PF15492_consen 80 IPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKH 159 (282)
T ss_pred cCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCC
Confidence 0000111 1123456666665322 4888888998888876432 1 111 1223356789999999999
Q ss_pred CEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCE--EEEEECCC------eEEEEEccCCceeEEEcCCC
Q psy8748 1837 QYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLA--FATGSEDK------TARLFDIRADQQIATYLPPN 1908 (2004)
Q Consensus 1837 ~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~--LaSgS~DG------tIrIWDLrtgk~i~t~~~~~ 1908 (2004)
+.|++||.... +++. -.+....+++-..-.+..+ .++...|+ +-.+|.+-+.+..... ..
T Consensus 160 ~LLlVgG~~~~------~~~~----s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~--~~ 227 (282)
T PF15492_consen 160 RLLLVGGCEQN------QDGM----SKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQ--GQ 227 (282)
T ss_pred CEEEEeccCCC------CCcc----ccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeecc--cc
Confidence 99888875432 0000 0011222222222222111 11121121 1123333322221111 23
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccC
Q psy8748 1909 KNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGH 1951 (2004)
Q Consensus 1909 ~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gH 1951 (2004)
....|..+..||||..||+...+|.|.+|++.+-........+
T Consensus 228 ~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~~~ 270 (282)
T PF15492_consen 228 EQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWKQD 270 (282)
T ss_pred CCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccchh
Confidence 3467999999999999999999999999999887777666543
No 299
>KOG3914|consensus
Probab=98.40 E-value=3e-06 Score=101.89 Aligned_cols=162 Identities=22% Similarity=0.363 Sum_probs=112.4
Q ss_pred EEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe-CCCcEEEeecC---CeEEEEECCCC
Q psy8748 1738 MSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGD---MKIVTWNLETG 1813 (2004)
Q Consensus 1738 tsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~D---GtI~IWDl~tg 1813 (2004)
..+..++.+++++++..+....++++..... ..+..... .....-..+.+. .+....++..- ..+.+|....+
T Consensus 66 ~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~--~~kl~~~~-~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~ 142 (390)
T KOG3914|consen 66 ALVLTSDSGRLVAVATSSKQRAVFDYRENPK--GAKLLDVS-CVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSG 142 (390)
T ss_pred cccccCCCceEEEEEeCCCceEEEEEecCCC--cceeeeEe-ecccCcceeeeeeccceEEEEeecCCceeeeeeccccc
Confidence 3445667788888888888777777765432 11222222 222233333343 33444444444 45555555544
Q ss_pred ceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEE-ecCCCCeEEEEEeCCCCEEEEEECCCeEEE
Q psy8748 1814 QRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTF-FGHEADVNSVCFHPSGLAFATGSEDKTARL 1892 (2004)
Q Consensus 1814 ~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl-~~h~s~ItsIafSPdg~~LaSgS~DGtIrI 1892 (2004)
... ...+|-..++.++|+||+++++++..|..|++-.......+..+ .||..-|..++.-++. .|++||.|+++++
T Consensus 143 ~~~--~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~-~LlS~sGD~tlr~ 219 (390)
T KOG3914|consen 143 RCE--PILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY-LLLSGSGDKTLRL 219 (390)
T ss_pred Ccc--hhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc-eeeecCCCCcEEE
Confidence 443 34589999999999999999999999999999887766555554 4799999999988764 5899999999999
Q ss_pred EEccCCceeEEEc
Q psy8748 1893 FDIRADQQIATYL 1905 (2004)
Q Consensus 1893 WDLrtgk~i~t~~ 1905 (2004)
||+.+|+.+.++.
T Consensus 220 Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 220 WDITSGKLLDTCD 232 (390)
T ss_pred EecccCCcccccc
Confidence 9999999987663
No 300
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.37 E-value=0.00011 Score=93.23 Aligned_cols=207 Identities=12% Similarity=0.046 Sum_probs=127.5
Q ss_pred ceeEEEEeCCCCE-EEEEeC---CCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCC
Q psy8748 1694 KVNSVHYSGDSRH-CVSGSL---DGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDST 1769 (2004)
Q Consensus 1694 ~VtsLaFSPDG~~-LASGS~---DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~ 1769 (2004)
.+..-.|+|||+. ++..+. +..|+++|+.+|+...... ..+......|+|||+.++.....+
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~------------- 254 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPK------------- 254 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccC-------------
Confidence 6778999999985 554433 3569999998887655443 455566778999998776543210
Q ss_pred CcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECC-C--
Q psy8748 1770 GAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVD-K-- 1846 (2004)
Q Consensus 1770 ~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~D-G-- 1846 (2004)
.+..|+++|+.++... .+ ..+.+......|+|||+.++..+.. |
T Consensus 255 -------------------------------g~~~Iy~~dl~~g~~~-~L-T~~~~~d~~p~~SPDG~~I~F~Sdr~g~~ 301 (419)
T PRK04043 255 -------------------------------GQPDIYLYDTNTKTLT-QI-TNYPGIDVNGNFVEDDKRIVFVSDRLGYP 301 (419)
T ss_pred -------------------------------CCcEEEEEECCCCcEE-Ec-ccCCCccCccEECCCCCEEEEEECCCCCc
Confidence 1234666666655432 22 1222223345799999988777643 3
Q ss_pred eEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECC---------CeEEEEEccCCceeEEEcCCCCCCCeEEEE
Q psy8748 1847 SCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSED---------KTARLFDIRADQQIATYLPPNKNSGFTSCA 1917 (2004)
Q Consensus 1847 sIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~D---------GtIrIWDLrtgk~i~t~~~~~~~s~ItsLa 1917 (2004)
.|+++|+.+++..+.... ... ...|+|+|+.++..+.. ..|.+.|+.++... .+.... ......
T Consensus 302 ~Iy~~dl~~g~~~rlt~~-g~~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~-~LT~~~---~~~~p~ 374 (419)
T PRK04043 302 NIFMKKLNSGSVEQVVFH-GKN--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIR-RLTANG---VNQFPR 374 (419)
T ss_pred eEEEEECCCCCeEeCccC-CCc--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeE-ECCCCC---CcCCeE
Confidence 588889887765333322 111 24899999998776654 26888888877643 332221 223578
Q ss_pred EcCCCCEEEEEeCCC---eEEEEECCCCeeeEEEccCCCCe
Q psy8748 1918 VSSSGRYIFCGSDDN---NVHVWDLLKTTHNGVLSGHENRV 1955 (2004)
Q Consensus 1918 fSPdG~~LaSGSsDG---sIrIWDL~tge~l~tL~gHs~~V 1955 (2004)
|+|||+.|+..+.++ .+.++++. |.....+....+.+
T Consensus 375 ~SPDG~~I~f~~~~~~~~~L~~~~l~-g~~~~~l~~~~g~~ 414 (419)
T PRK04043 375 FSSDGGSIMFIKYLGNQSALGIIRLN-YNKSFLFPLKVGKI 414 (419)
T ss_pred ECCCCCEEEEEEccCCcEEEEEEecC-CCeeEEeecCCCcc
Confidence 999999887765432 36666763 33333343333333
No 301
>KOG4714|consensus
Probab=98.36 E-value=5.6e-06 Score=94.67 Aligned_cols=196 Identities=20% Similarity=0.250 Sum_probs=116.5
Q ss_pred eeEEEEeCCCCEEEEEeCCCeEEEEECCCCceE------------EEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEE
Q psy8748 1695 VNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKT------------QVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYD 1762 (2004)
Q Consensus 1695 VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l------------~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWD 1762 (2004)
|+.+.++-+ -.|+++..++.+......++.+. +.+..|.++-.+-+.+-.++.+++++.||.+.+++
T Consensus 39 ~~~~~~v~~-~~lf~~e~~~~~ss~g~~r~~~~~~~~rt~~i~~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s 117 (319)
T KOG4714|consen 39 LSKVSLSAE-YILFTGETSSQIISLGKGRGRCISLWERDDGIDPFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFS 117 (319)
T ss_pred EEEeechhh-heeecccchhheeeeccceEEEechhhcccCcCceeeeeccCCCCCcccccccCCceEecCCCceEEEEe
Confidence 555555433 34666666666555544333322 22223333222222333467899999999999999
Q ss_pred cCCCCCCCcceEEEEEec-CccceeeeEEeCCCcEEEe-----ecCCeEEEEECCCCceeEEeeccccCCeEEEEECCC-
Q psy8748 1763 LNNRDSTGAAKVIRELLG-YEGFLSSCRFIDDTTLLTG-----SGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPD- 1835 (2004)
Q Consensus 1763 l~t~~~~~~~k~i~sl~g-h~~~Vssvafsdd~~LlSg-----S~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPd- 1835 (2004)
.+... .....+.. +.+..........+.+.++ ..-+..+.|+++..+........ ...|++++-+|.
T Consensus 118 ~~~~~-----~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~a~~~~p~~t~~~~~~~-~~~v~~l~~hp~q 191 (319)
T KOG4714|consen 118 TDKDL-----ALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFYANTLDPIKTLIPSKKA-LDAVTALCSHPAQ 191 (319)
T ss_pred chHHH-----hhhhhcccccccccccceeecccEEecCCcceEeeccceeeecccccccccccccc-cccchhhhCCccc
Confidence 87521 11111111 1111111111122222222 22345667776654433222222 234999999994
Q ss_pred CCEEEEEECCCeEEEEECCCCeE-EEEEecCCCCeEEEEEeC-CCCEEEEEECCCeEEEEEccC
Q psy8748 1836 GQYFVTGSVDKSCKLWDFREKKC-VQTFFGHEADVNSVCFHP-SGLAFATGSEDKTARLFDIRA 1897 (2004)
Q Consensus 1836 g~~LaSGS~DGsIrIWDlrs~k~-I~tl~~h~s~ItsIafSP-dg~~LaSgS~DGtIrIWDLrt 1897 (2004)
.+.+++|+.||.+.+||.+.... ...+..|+.+|+.+.|+| ++..|+++++||.+..||..+
T Consensus 192 q~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 192 QHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 55778889999999999997743 445678999999999999 678899999999999999764
No 302
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.34 E-value=7.7e-06 Score=94.89 Aligned_cols=245 Identities=20% Similarity=0.319 Sum_probs=165.9
Q ss_pred CCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCc------------cceeeeEEeCC---CcEEE
Q psy8748 1734 SAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYE------------GFLSSCRFIDD---TTLLT 1798 (2004)
Q Consensus 1734 t~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~------------~~Vssvafsdd---~~LlS 1798 (2004)
...|+++.|...|.++++|...|.|.+|.-+... ....+....+.+|. ..|..+.|.++ ..++.
T Consensus 26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~-~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSY-GCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred cceeeEEEeccccceEeecCCCceEEEeeccccc-ccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 4568999999999999999999999999765432 11222333344443 34556666633 34888
Q ss_pred eecCCeEEEEECCCCce-------------------e----------------------EE-eeccccCCeEEEEECCCC
Q psy8748 1799 GSGDMKIVTWNLETGQR-------------------I----------------------HE-VAQAHIGDVVSISLSPDG 1836 (2004)
Q Consensus 1799 gS~DGtI~IWDl~tg~~-------------------i----------------------~~-il~~h~~~ItsLafSPdg 1836 (2004)
.+.|.+|++|.+..... + .+ ....|.--|.++.|+.|.
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~NsD~ 184 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNSDK 184 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecCch
Confidence 99999999998754310 0 00 123566678889999887
Q ss_pred CEEEEEECCCeEEEEECCCCe---EEEEEecCC-----CCeEEEEEeCC-CCEEEEEECCCeEEEEEccCCcee----EE
Q psy8748 1837 QYFVTGSVDKSCKLWDFREKK---CVQTFFGHE-----ADVNSVCFHPS-GLAFATGSEDKTARLFDIRADQQI----AT 1903 (2004)
Q Consensus 1837 ~~LaSGS~DGsIrIWDlrs~k---~I~tl~~h~-----s~ItsIafSPd-g~~LaSgS~DGtIrIWDLrtgk~i----~t 1903 (2004)
..++++ .|=.|.+|++.-.. .+..++.|. .-|++..|+|. .+.+...+..|.|++-|++..... ..
T Consensus 185 et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl~DlRq~alcdn~~kl 263 (460)
T COG5170 185 ETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKLNDLRQSALCDNSKKL 263 (460)
T ss_pred heeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEehhhhhhhhccCchhh
Confidence 777766 47789999876322 233444554 34788899994 456777888999999999843211 00
Q ss_pred E----cC------CCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC-eeeEEEccCC------------CCe---EE
Q psy8748 1904 Y----LP------PNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKT-THNGVLSGHE------------NRV---TS 1957 (2004)
Q Consensus 1904 ~----~~------~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tg-e~l~tL~gHs------------~~V---ts 1957 (2004)
+ .. ......|..+.|+++|+++++-+ --+|++||++.. .+++++..|. +.| ..
T Consensus 264 fe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRd-yltvkiwDvnm~k~pikTi~~h~~l~~~l~d~YEnDaifdkFe 342 (460)
T COG5170 264 FELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRD-YLTVKIWDVNMAKNPIKTIPMHCDLMDELNDVYENDAIFDKFE 342 (460)
T ss_pred hhhccCcccchhHHHHhhhhcceEEcCCCcEEEEec-cceEEEEecccccCCceeechHHHHHHHHHhhhhccceeeeEE
Confidence 1 00 11134578899999999999864 458999999754 4566664442 233 45
Q ss_pred EEEcCCCCEEEEEECCCeEEEEEC
Q psy8748 1958 ISLSPNGMALVTSSWDQFVKVWQE 1981 (2004)
Q Consensus 1958 LaFSPDg~~LaSgS~DGtIrIWdl 1981 (2004)
+.|+.|...+.+|+..+..-+|-.
T Consensus 343 isfSgd~~~v~sgsy~NNfgiyp~ 366 (460)
T COG5170 343 ISFSGDDKHVLSGSYSNNFGIYPT 366 (460)
T ss_pred EEecCCcccccccccccceeeecc
Confidence 788999999999998887777764
No 303
>KOG4532|consensus
Probab=98.34 E-value=3.7e-05 Score=88.43 Aligned_cols=202 Identities=12% Similarity=0.032 Sum_probs=140.4
Q ss_pred CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEE
Q psy8748 1793 DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP-DGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNS 1871 (2004)
Q Consensus 1793 d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP-dg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~Its 1871 (2004)
...++.|+..|...+|...+.+........+...|+-..=.- ..-.+..++.|.++++.++.-+..-.......-.+.+
T Consensus 84 c~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns 163 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNS 163 (344)
T ss_pred ccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeeccccceee
Confidence 456888999999999999987766555555554443221111 1224566777888888877644322222111234789
Q ss_pred EEEeCCCCEEEEEECCCeEEEEEccCCc-eeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEE---
Q psy8748 1872 VCFHPSGLAFATGSEDKTARLFDIRADQ-QIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGV--- 1947 (2004)
Q Consensus 1872 IafSPdg~~LaSgS~DGtIrIWDLrtgk-~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~t--- 1947 (2004)
++++++++++++.+....|..|.+.... .+...........-.+..|+.....+|++..||++.|||++.......
T Consensus 164 ~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~s 243 (344)
T KOG4532|consen 164 LHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEIS 243 (344)
T ss_pred eEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhc
Confidence 9999999999999999999999986533 222222223334456889999999999999999999999987543322
Q ss_pred --EccCCCCeEEEEEcCCCC--EEEEEECCCeEEEEECCCCeEEEEEEeec
Q psy8748 1948 --LSGHENRVTSISLSPNGM--ALVTSSWDQFVKVWQESNTIVWKVLKVYN 1994 (2004)
Q Consensus 1948 --L~gHs~~VtsLaFSPDg~--~LaSgS~DGtIrIWdlstg~l~k~Ik~~~ 1994 (2004)
-..|.+.+..+.|++.|. +|...-.-+.+.+-|+.++...+.+..+.
T Consensus 244 strp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~ 294 (344)
T KOG4532|consen 244 STRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPD 294 (344)
T ss_pred ccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCc
Confidence 235899999999998654 35555556789999999988777776554
No 304
>KOG3914|consensus
Probab=98.28 E-value=4.4e-06 Score=100.48 Aligned_cols=157 Identities=17% Similarity=0.229 Sum_probs=111.9
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCCCeE----EEEEecCCCCeEEEEEeCCCCEEEEEECCCe---EEEEEccCCc
Q psy8748 1827 VVSISLSPDGQYFVTGSVDKSCKLWDFREKKC----VQTFFGHEADVNSVCFHPSGLAFATGSEDKT---ARLFDIRADQ 1899 (2004)
Q Consensus 1827 ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~----I~tl~~h~s~ItsIafSPdg~~LaSgS~DGt---IrIWDLrtgk 1899 (2004)
...+..++++++++++..+....+++++.... +... .-...-+++.|..+...+..+..-|. +.+|....+.
T Consensus 65 ~~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~~kl~~~~-~v~~~~~ai~~~~~~~sv~v~dkagD~~~~di~s~~~~~ 143 (390)
T KOG3914|consen 65 PALVLTSDSGRLVAVATSSKQRAVFDYRENPKGAKLLDVS-CVPKRPTAISFIREDTSVLVADKAGDVYSFDILSADSGR 143 (390)
T ss_pred ccccccCCCceEEEEEeCCCceEEEEEecCCCcceeeeEe-ecccCcceeeeeeccceEEEEeecCCceeeeeecccccC
Confidence 34456778889999998888877777664432 2222 12233345555555555555444444 5555544454
Q ss_pred eeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEE-ccCCCCeEEEEEcCCCCEEEEEECCCeEEE
Q psy8748 1900 QIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVL-SGHENRVTSISLSPNGMALVTSSWDQFVKV 1978 (2004)
Q Consensus 1900 ~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL-~gHs~~VtsLaFSPDg~~LaSgS~DGtIrI 1978 (2004)
..... +|-..++.++|+||+++|++++.|..|++-.......+..+ -||+..|..++.-++. .|++||.|++|++
T Consensus 144 ~~~~l---GhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~-~LlS~sGD~tlr~ 219 (390)
T KOG3914|consen 144 CEPIL---GHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY-LLLSGSGDKTLRL 219 (390)
T ss_pred cchhh---hhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc-eeeecCCCCcEEE
Confidence 44443 67788999999999999999999999999887666555554 5799999999997654 4899999999999
Q ss_pred EECCCCeEEE
Q psy8748 1979 WQESNTIVWK 1988 (2004)
Q Consensus 1979 Wdlstg~l~k 1988 (2004)
||+.+|+...
T Consensus 220 Wd~~sgk~L~ 229 (390)
T KOG3914|consen 220 WDITSGKLLD 229 (390)
T ss_pred EecccCCccc
Confidence 9999997653
No 305
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.24 E-value=0.0016 Score=76.48 Aligned_cols=218 Identities=17% Similarity=0.196 Sum_probs=142.3
Q ss_pred EEEEeC-CCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEe-cCCCEEEEeecCCeEEEEEcCCCCCCCcceE
Q psy8748 1697 SVHYSG-DSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFA-QSGNFVACGGMDNMCTVYDLNNRDSTGAAKV 1774 (2004)
Q Consensus 1697 sLaFSP-DG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafS-Pdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~ 1774 (2004)
+.+|.+ ++.++++--..+.|..|+..++.... +.... ..++++. ++ ..++.+...+ +.++|..++ ....
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~-~~~~~--~~G~~~~~~~-g~l~v~~~~~-~~~~d~~~g----~~~~ 74 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEV-IDLPG--PNGMAFDRPD-GRLYVADSGG-IAVVDPDTG----KVTV 74 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-EESSS--EEEEEEECTT-SEEEEEETTC-EEEEETTTT----EEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEE-EecCC--CceEEEEccC-CEEEEEEcCc-eEEEecCCC----cEEE
Confidence 678998 67777777778999999987775543 33222 6777887 55 4455555544 566687664 2333
Q ss_pred EEEEe--c-CccceeeeEEeCCCcEEEeecC---------CeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEE-
Q psy8748 1775 IRELL--G-YEGFLSSCRFIDDTTLLTGSGD---------MKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVT- 1841 (2004)
Q Consensus 1775 i~sl~--g-h~~~Vssvafsdd~~LlSgS~D---------GtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaS- 1841 (2004)
..... . .......+++.+++.+..+... |.|..++.. ++.. .. .........++|+|+++.|++
T Consensus 75 ~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~-~~-~~~~~~pNGi~~s~dg~~lyv~ 151 (246)
T PF08450_consen 75 LADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVT-VV-ADGLGFPNGIAFSPDGKTLYVA 151 (246)
T ss_dssp EEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEE-EE-EEEESSEEEEEEETTSSEEEEE
T ss_pred EeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEE-EE-ecCcccccceEECCcchheeec
Confidence 33332 1 3455667788777766665432 568888877 4432 22 233456789999999997764
Q ss_pred EECCCeEEEEECCCCe-------EEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeE
Q psy8748 1842 GSVDKSCKLWDFREKK-------CVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFT 1914 (2004)
Q Consensus 1842 GS~DGsIrIWDlrs~k-------~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~It 1914 (2004)
-+..+.|..|++.... ....+....+..-.+++..+|++.++....+.|.++|.+ |+.+..+..+. ..++
T Consensus 152 ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~--~~~t 228 (246)
T PF08450_consen 152 DSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPV--PRPT 228 (246)
T ss_dssp ETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SS--SSEE
T ss_pred ccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCC--CCEE
Confidence 4567789999885321 111222222347889999999988888889999999988 88888776552 4789
Q ss_pred EEEE-cCCCCEEEEEe
Q psy8748 1915 SCAV-SSSGRYIFCGS 1929 (2004)
Q Consensus 1915 sLaf-SPdG~~LaSGS 1929 (2004)
+++| .++.+.|++.+
T Consensus 229 ~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 229 NCAFGGPDGKTLYVTT 244 (246)
T ss_dssp EEEEESTTSSEEEEEE
T ss_pred EEEEECCCCCEEEEEe
Confidence 9999 46766666543
No 306
>KOG4714|consensus
Probab=98.20 E-value=9.4e-06 Score=92.91 Aligned_cols=166 Identities=17% Similarity=0.159 Sum_probs=107.8
Q ss_pred ccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCce-EEEeeCCCCceEEEEEecCCCEEEEeec-----CCe
Q psy8748 1684 PKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNK-TQVIPLRSAWVMSVAFAQSGNFVACGGM-----DNM 1757 (2004)
Q Consensus 1684 pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~-l~ti~~Ht~~ItsLafSPdg~~LaSGS~-----DGt 1757 (2004)
+.+.+..|+++=.+-+.+-.++.+++++.||.+.+++.+.-.. .+.+......-.+.+....++++.+++. -+.
T Consensus 81 ~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~ 160 (319)
T KOG4714|consen 81 PFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDN 160 (319)
T ss_pred ceeeeeccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeeccc
Confidence 4455555665555555555567899999999999998765211 1122211111223344445666655432 234
Q ss_pred EEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC--CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC-
Q psy8748 1758 CTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID--DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP- 1834 (2004)
Q Consensus 1758 IrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd--d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP- 1834 (2004)
.++|+++... ...........+.+++-++ ...+++|+.||.+-+||.+........+..|+.++..+-|+|
T Consensus 161 ~~a~~~~p~~------t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk 234 (319)
T KOG4714|consen 161 FYANTLDPIK------TLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPK 234 (319)
T ss_pred eeeecccccc------cccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCC
Confidence 5666665321 1111111122366666553 456888999999999999998777777889999999999999
Q ss_pred CCCEEEEEECCCeEEEEECCC
Q psy8748 1835 DGQYFVTGSVDKSCKLWDFRE 1855 (2004)
Q Consensus 1835 dg~~LaSGS~DGsIrIWDlrs 1855 (2004)
++..|++++.||.+.-||..+
T Consensus 235 ~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 235 NPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred CchheeEecCCCcEEEEcCCC
Confidence 567899999999999999764
No 307
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.20 E-value=0.00032 Score=90.77 Aligned_cols=276 Identities=12% Similarity=0.077 Sum_probs=167.0
Q ss_pred CCEEEEEeCCCeEEEEECCCCceEEEeeCCCC------ceE--EEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEE
Q psy8748 1704 SRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSA------WVM--SVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVI 1775 (2004)
Q Consensus 1704 G~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~------~It--sLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i 1775 (2004)
+..++.++.++.+.-.|..+|+.+..+..... .+. .+... ++..++.++.+|.|..+|.++++........
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~ 139 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNN 139 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCC
Confidence 44566777789999999999998887754332 010 11111 2267888889999999999876532221111
Q ss_pred EEEecCcccee-eeEEeCCCcEEEee---------cCCeEEEEECCCCceeEEeeccccC-------------------C
Q psy8748 1776 RELLGYEGFLS-SCRFIDDTTLLTGS---------GDMKIVTWNLETGQRIHEVAQAHIG-------------------D 1826 (2004)
Q Consensus 1776 ~sl~gh~~~Vs-svafsdd~~LlSgS---------~DGtI~IWDl~tg~~i~~il~~h~~-------------------~ 1826 (2004)
.... ....+. ..... ++.+++++ .+|.+..+|..+|+...+....... .
T Consensus 140 ~~~~-~~~~i~ssP~v~-~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 217 (488)
T cd00216 140 DQVP-PGYTMTGAPTIV-KKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGT 217 (488)
T ss_pred CCcC-cceEecCCCEEE-CCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCC
Confidence 0000 000011 11222 34555554 3688999999999987665332110 1
Q ss_pred e-EEEEECCCCCEEEEEECCC------------------eEEEEECCCCeEEEEEecCCCCeE------EEEEe----CC
Q psy8748 1827 V-VSISLSPDGQYFVTGSVDK------------------SCKLWDFREKKCVQTFFGHEADVN------SVCFH----PS 1877 (2004)
Q Consensus 1827 I-tsLafSPdg~~LaSGS~DG------------------sIrIWDlrs~k~I~tl~~h~s~It------sIafS----Pd 1877 (2004)
+ ...++++.+..+++++.++ .|.-+|..+++....+........ ...+. -+
T Consensus 218 vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~ 297 (488)
T cd00216 218 SWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKD 297 (488)
T ss_pred ccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccC
Confidence 1 1244555667888887665 799999999998877642211111 01111 13
Q ss_pred CC---EEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEE------------------eCCCeEEE
Q psy8748 1878 GL---AFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCG------------------SDDNNVHV 1936 (2004)
Q Consensus 1878 g~---~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSG------------------SsDGsIrI 1936 (2004)
+. .+++++.+|.+...|.++|+.+....... ..++.+| ..++++ ..+|.+.-
T Consensus 298 g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~-----~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~A 370 (488)
T cd00216 298 GKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE-----QPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAA 370 (488)
T ss_pred CCeeEEEEEECCCceEEEEECCCCcEeeEeEeec-----cccccCC--ceEEEccccccccCcccccCCCCCCCceEEEE
Confidence 33 57888899999999999999988764221 1123333 333332 24678999
Q ss_pred EECCCCeeeEEEccCC--------CCe--EEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEE
Q psy8748 1937 WDLLKTTHNGVLSGHE--------NRV--TSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLK 1991 (2004)
Q Consensus 1937 WDL~tge~l~tL~gHs--------~~V--tsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik 1991 (2004)
+|+.+|+.+....... .+. ..+. -.+..++.++.||.|+.+|.++|+..-..+
T Consensus 371 lD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~--~~g~~v~~g~~dG~l~ald~~tG~~lW~~~ 433 (488)
T cd00216 371 LDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLA--TAGNLVFAGAADGYFRAFDATTGKELWKFR 433 (488)
T ss_pred EeCCCCcEeeEeeCCccccccccCCcccCcceE--ecCCeEEEECCCCeEEEEECCCCceeeEEE
Confidence 9999998887765321 111 1122 255688889999999999999987544444
No 308
>KOG1920|consensus
Probab=98.14 E-value=0.00037 Score=93.20 Aligned_cols=271 Identities=13% Similarity=0.099 Sum_probs=158.3
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcc
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAA 1772 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~ 1772 (2004)
+.|.++.|.-++.-++.+..+|.|.+-|..+..... ...-...|.+++|+||+..++..+.++++.+-+-+- ......
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~ei-vg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f-~~i~E~ 146 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEI-VGNVDNGISAASWSPDEELLALITGRQTLLFMTKDF-EPIAEK 146 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccceee-eeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccc-cchhcc
Confidence 689999999999989989999999999877764433 223456799999999999999998888776654321 100010
Q ss_pred eEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeE-------Eeec--cccCCeEEEEECCCCCEEEEEE
Q psy8748 1773 KVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIH-------EVAQ--AHIGDVVSISLSPDGQYFVTGS 1843 (2004)
Q Consensus 1773 k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~-------~il~--~h~~~ItsLafSPdg~~LaSGS 1843 (2004)
...... ...+.++.++....=.-+.-..|+... +... .....=++++|--||.++++..
T Consensus 147 ~L~~d~------------~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~ 214 (1265)
T KOG1920|consen 147 PLDADD------------ERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSF 214 (1265)
T ss_pred cccccc------------ccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEE
Confidence 110000 011223333332211111111111100 0000 1122235689999999999843
Q ss_pred -----CCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEE---CCCeEEEEEccCCceeEEE--cCCCCCCCe
Q psy8748 1844 -----VDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGS---EDKTARLFDIRADQQIATY--LPPNKNSGF 1913 (2004)
Q Consensus 1844 -----~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS---~DGtIrIWDLrtgk~i~t~--~~~~~~s~I 1913 (2004)
....|++||.+ +..-..-....+.-.+++|-|.|..+++-. .|+.|.+|.-+ |-.-..+ ..+.....+
T Consensus 215 ~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErN-GL~hg~f~l~~p~de~~v 292 (1265)
T KOG1920|consen 215 VESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERN-GLRHGEFVLPFPLDEKEV 292 (1265)
T ss_pred EeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecC-CccccccccCCcccccch
Confidence 23789999976 443222223334456899999999988754 35679999854 3332222 122233448
Q ss_pred EEEEEcCCCCEEEE---EeCCCeEEEEECCCCeee--EEEccCCCCeEEEEEcCCCC-EEEEEECCCeEEEEEC
Q psy8748 1914 TSCAVSSSGRYIFC---GSDDNNVHVWDLLKTTHN--GVLSGHENRVTSISLSPNGM-ALVTSSWDQFVKVWQE 1981 (2004)
Q Consensus 1914 tsLafSPdG~~LaS---GSsDGsIrIWDL~tge~l--~tL~gHs~~VtsLaFSPDg~-~LaSgS~DGtIrIWdl 1981 (2004)
..++|+.++..|++ ......|++|-+.+..-. ..+....... +.|+|... .+..-..+|...++++
T Consensus 293 e~L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~~--~~W~p~~~~~L~v~~~sG~~~v~~~ 364 (1265)
T KOG1920|consen 293 EELAWNSNSDILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKAL--LMWDPVTEKTLHVLRESGQRLVRDF 364 (1265)
T ss_pred heeeecCCCCceeeeecccccceEEEEEecCeEEEEEEEEecccccc--ccccCCCceeEEEEecCCcEEEEEE
Confidence 99999999999998 444455999998775432 2222222222 77777322 2333335565555443
No 309
>KOG1275|consensus
Probab=98.14 E-value=3.2e-05 Score=99.90 Aligned_cols=182 Identities=16% Similarity=0.252 Sum_probs=138.8
Q ss_pred CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEE
Q psy8748 1792 DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNS 1871 (2004)
Q Consensus 1792 dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~Its 1871 (2004)
+...++.|+-...+..+|+++.+....... ..+.|+-++. +++.+.+|...|+|.+-|.++.+.++++..|.+.|..
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v-~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSD 222 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNV-SASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISD 222 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeec-cCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeeeeccccceee
Confidence 556788888888899999998876644322 2233665554 5889999999999999999999999999999999987
Q ss_pred EEEeCCCCEEEEEEC---------CCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEECC-
Q psy8748 1872 VCFHPSGLAFATGSE---------DKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSS-GRYIFCGSDDNNVHVWDLL- 1940 (2004)
Q Consensus 1872 IafSPdg~~LaSgS~---------DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPd-G~~LaSGSsDGsIrIWDL~- 1940 (2004)
+.. .|+.++++|. |.-|+|||++..+.+.-+..+. .-.-+.|+|. ...+++.+..|...+-|..
T Consensus 223 fDv--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~---~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~ 297 (1118)
T KOG1275|consen 223 FDV--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPY---GPQFLRFHPSLTTRLAVTSQSGQFQFVDTAT 297 (1118)
T ss_pred eec--cCCeEEEeecccccccccccchhhhhhhhhhhccCCccccc---CchhhhhcccccceEEEEecccceeeccccc
Confidence 665 5789998886 4458999999877765553332 2356778884 4567888899999999943
Q ss_pred --CC-eeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Q psy8748 1941 --KT-THNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQE 1981 (2004)
Q Consensus 1941 --tg-e~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdl 1981 (2004)
+. .-+..+......+.++.++++|+.++.|..+|.|.+|.-
T Consensus 298 lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~ 341 (1118)
T KOG1275|consen 298 LSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWAD 341 (1118)
T ss_pred cCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecC
Confidence 22 122333334556999999999999999999999999983
No 310
>KOG2114|consensus
Probab=98.12 E-value=0.00031 Score=91.11 Aligned_cols=225 Identities=12% Similarity=0.170 Sum_probs=144.6
Q ss_pred ceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCc-eEEEEEecCCCEEEEeecCC-----eEEEEEcCCCC
Q psy8748 1694 KVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAW-VMSVAFAQSGNFVACGGMDN-----MCTVYDLNNRD 1767 (2004)
Q Consensus 1694 ~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~-ItsLafSPdg~~LaSGS~DG-----tIrVWDl~t~~ 1767 (2004)
.|+| |++.+..+|.|+.+|.|.+.+ ...+.++.++.+... |..+....+.++|++.+.|+ .+++|+++..+
T Consensus 27 ~isc--~~s~~~~vvigt~~G~V~~Ln-~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~ 103 (933)
T KOG2114|consen 27 AISC--CSSSTGSVVIGTADGRVVILN-SSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVD 103 (933)
T ss_pred ceeE--EcCCCceEEEeeccccEEEec-ccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccC
Confidence 4444 458889999999999998887 344555777777776 44443333446888877665 48889887532
Q ss_pred CCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCe
Q psy8748 1768 STGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKS 1847 (2004)
Q Consensus 1768 ~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGs 1847 (2004)
........ +..+++-... .....++.+++++.+-+.+++|-.+|.
T Consensus 104 ~n~sP~c~---------------------------~~~ri~~~~n--------p~~~~p~s~l~Vs~~l~~Iv~Gf~nG~ 148 (933)
T KOG2114|consen 104 KNNSPQCL---------------------------YEHRIFTIKN--------PTNPSPASSLAVSEDLKTIVCGFTNGL 148 (933)
T ss_pred CCCCccee---------------------------eeeeeeccCC--------CCCCCcceEEEEEccccEEEEEecCcE
Confidence 11110000 1112222111 123567889999999999999999999
Q ss_pred EEEEECC----CCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCC
Q psy8748 1848 CKLWDFR----EKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGR 1923 (2004)
Q Consensus 1848 IrIWDlr----s~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~ 1923 (2004)
|..+.-+ .+....-....+++|+++++..++..++.......|.+|.+. |+.+.......++....|..+++...
T Consensus 149 V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~-gr~p~~~~ld~~G~~lnCss~~~~t~ 227 (933)
T KOG2114|consen 149 VICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLS-GRTPSLKVLDNNGISLNCSSFSDGTY 227 (933)
T ss_pred EEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEec-CCCcceeeeccCCccceeeecCCCCc
Confidence 9998532 122222223456799999999998873333345679999998 44433333456677888989888666
Q ss_pred EEEEEeCCCeEEEEECCCCeeeEEEc-cCCCCeEEE
Q psy8748 1924 YIFCGSDDNNVHVWDLLKTTHNGVLS-GHENRVTSI 1958 (2004)
Q Consensus 1924 ~LaSGSsDGsIrIWDL~tge~l~tL~-gHs~~VtsL 1958 (2004)
.+++++.. -+.+||.....+-..+. ||......+
T Consensus 228 qfIca~~e-~l~fY~sd~~~~cfaf~~g~kk~~~~~ 262 (933)
T KOG2114|consen 228 QFICAGSE-FLYFYDSDGRGPCFAFEVGEKKEMLVF 262 (933)
T ss_pred cEEEecCc-eEEEEcCCCcceeeeecCCCeEEEEEE
Confidence 45555444 59999987666666665 666554433
No 311
>KOG2695|consensus
Probab=98.12 E-value=7.4e-06 Score=96.56 Aligned_cols=151 Identities=19% Similarity=0.254 Sum_probs=121.5
Q ss_pred EEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCC-----eEEEEEecCCCCeE
Q psy8748 1796 LLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREK-----KCVQTFFGHEADVN 1870 (2004)
Q Consensus 1796 LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~-----k~I~tl~~h~s~It 1870 (2004)
-++.+.+..|-+-|+.+|... .+ ...+.|.++.|...++.+..|+..|.|..+|++.+ .+...+ .|...|+
T Consensus 227 hfs~G~sqqv~L~nvetg~~q--sf-~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvt 302 (425)
T KOG2695|consen 227 HFSVGLSQQVLLTNVETGHQQ--SF-QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVT 302 (425)
T ss_pred eecccccceeEEEEeeccccc--cc-ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCcchh
Confidence 366777788999999988653 22 36678999999998999999999999999999865 233333 6889999
Q ss_pred EEEEeC-CCCEEEEEECCCeEEEEEccCCce---eEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeE
Q psy8748 1871 SVCFHP-SGLAFATGSEDKTARLFDIRADQQ---IATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNG 1946 (2004)
Q Consensus 1871 sIafSP-dg~~LaSgS~DGtIrIWDLrtgk~---i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~ 1946 (2004)
++..-. ++.++++.+.+|+|.+||.+--++ +..+..+.......-+-+.+....+++++.|...+||.++.|..+.
T Consensus 303 slq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~ 382 (425)
T KOG2695|consen 303 SLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLC 382 (425)
T ss_pred hhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceee
Confidence 998777 788999999999999999987776 7777555444444555677788889999999999999999999988
Q ss_pred EEcc
Q psy8748 1947 VLSG 1950 (2004)
Q Consensus 1947 tL~g 1950 (2004)
++..
T Consensus 383 tipf 386 (425)
T KOG2695|consen 383 TIPF 386 (425)
T ss_pred ccCC
Confidence 8753
No 312
>KOG4649|consensus
Probab=98.05 E-value=0.0015 Score=75.41 Aligned_cols=263 Identities=16% Similarity=0.191 Sum_probs=150.0
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCc
Q psy8748 1703 DSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYE 1782 (2004)
Q Consensus 1703 DG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~ 1782 (2004)
-|++++.|+..|.+++.+.++|.....+.....--......+++..+..|+.|++.+..|..+. ..+.......
T Consensus 62 vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~------~cVykskcgG 135 (354)
T KOG4649|consen 62 VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTY------GCVYKSKCGG 135 (354)
T ss_pred ECCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEeccccc------ceEEecccCC
Confidence 3678999999999999999999888877654432233456778999999999999999998754 2333333333
Q ss_pred cceeeeEEeC-CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEE--EEECCCCCEEEEEECCCeEEEEECCCCeEE
Q psy8748 1783 GFLSSCRFID-DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVS--ISLSPDGQYFVTGSVDKSCKLWDFREKKCV 1859 (2004)
Q Consensus 1783 ~~Vssvafsd-d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~Its--LafSPdg~~LaSGS~DGsIrIWDlrs~k~I 1859 (2004)
+...+-...+ ++.++++...|.+.--..+......-......++|.+ ++ -+..+..++-||.+.-+| ..|+.+
T Consensus 136 ~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~~~~~~w~~~~~~PiF~splc---v~~sv~i~~VdG~l~~f~-~sG~qv 211 (354)
T KOG4649|consen 136 GTFVSPVIAPGDGSLYAAITAGAVLAVTKNPYSSTEFWAATRFGPIFASPLC---VGSSVIITTVDGVLTSFD-ESGRQV 211 (354)
T ss_pred ceeccceecCCCceEEEEeccceEEEEccCCCCcceehhhhcCCccccCcee---ccceEEEEEeccEEEEEc-CCCcEE
Confidence 3333333333 4557777777777766666553221111112223322 11 244566677788877777 556655
Q ss_pred EEEecCCCCeEE-EEEe-CCCCEEEEEECCCe--------EEEEEccCCceeEEEcCCCCCCCeEEEEEcC----CCCEE
Q psy8748 1860 QTFFGHEADVNS-VCFH-PSGLAFATGSEDKT--------ARLFDIRADQQIATYLPPNKNSGFTSCAVSS----SGRYI 1925 (2004)
Q Consensus 1860 ~tl~~h~s~Its-IafS-Pdg~~LaSgS~DGt--------IrIWDLrtgk~i~t~~~~~~~s~ItsLafSP----dG~~L 1925 (2004)
..+ ...++|.. -+-+ |..+.+..+..+.. --+|..++|.....+..+.- ..+++. ..+++
T Consensus 212 wr~-~t~GpIf~~Pc~s~Ps~q~i~~~~~~Cf~~~~p~~ghL~w~~~~g~t~~vy~~p~l-----~F~~h~~~~S~~~ll 285 (354)
T KOG4649|consen 212 WRP-ATKGPIFMEPCESRPSCQQISLENENCFCAPLPIAGHLLWATQSGTTLHVYLSPKL-----RFDLHSPGISYPKLL 285 (354)
T ss_pred Eee-cCCCceecccccCCCcceEEEEecCCeEEEeccccceEEEEecCCcEEEEEeCccc-----ceeccCCCCcchhhh
Confidence 544 23333321 1111 33333444433322 33566555544443322211 112221 14567
Q ss_pred EEEeCCCeEEEEECCCCeeeEEEccCCCCeEEE---E-----E-cC---CCCEEEEEECCCeEEEEECCCC
Q psy8748 1926 FCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSI---S-----L-SP---NGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1926 aSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsL---a-----F-SP---Dg~~LaSgS~DGtIrIWdlstg 1984 (2004)
..++.||.+.|.-++.. +.....|.+.+..+ . | +| +| +|+.|+.|..|+-||+++.
T Consensus 286 ~~~s~dgkv~il~~~~s--l~~~~s~~g~lq~~~~~el~~eIFsSPvii~g-rl~igcRDdYv~cldl~~~ 353 (354)
T KOG4649|consen 286 RRSSGDGKVMILMTSKS--LAEISSNGGELQNLEAIELSNEIFSSPVIIDG-RLLIGCRDDYVRCLDLDTW 353 (354)
T ss_pred hhhcCCCcEEEEEeccc--ccccccCCCccceEEEeecCcccccCCeEEcc-EEEEEEccCeEEEEecccc
Confidence 78889999888854332 33334444433322 2 2 22 34 5888899999999999874
No 313
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.03 E-value=0.00094 Score=78.47 Aligned_cols=194 Identities=13% Similarity=0.191 Sum_probs=128.4
Q ss_pred EeCCCcEEEeecCCeEEEEECCCCc----eeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEec-
Q psy8748 1790 FIDDTTLLTGSGDMKIVTWNLETGQ----RIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFG- 1864 (2004)
Q Consensus 1790 fsdd~~LlSgS~DGtI~IWDl~tg~----~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~- 1864 (2004)
..+++.+++.-.|..|.+-..++.- ....+.+.....-..++|+||+..|+.+...|+|++||+.... +..+..
T Consensus 5 ~~~~Gk~lAi~qd~~iEiRsa~Ddf~si~~kcqVpkD~~PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~-lf~I~p~ 83 (282)
T PF15492_consen 5 LSSDGKLLAILQDQCIEIRSAKDDFSSIIGKCQVPKDPNPQWRKLAWSPDCTLLAYAESTGTIRVFDLMGSE-LFVIPPA 83 (282)
T ss_pred ecCCCcEEEEEeccEEEEEeccCCchheeEEEecCCCCCchheEEEECCCCcEEEEEcCCCeEEEEecccce-eEEcCcc
Confidence 3456677777777777776544321 1112233344456789999999999999999999999987533 333322
Q ss_pred ------CCCCeEEEEEeCCC------CEEEEEECCCeEEEEEccC-----CceeEEEcCC-CCCCCeEEEEEcCCCCEEE
Q psy8748 1865 ------HEADVNSVCFHPSG------LAFATGSEDKTARLFDIRA-----DQQIATYLPP-NKNSGFTSCAVSSSGRYIF 1926 (2004)
Q Consensus 1865 ------h~s~ItsIafSPdg------~~LaSgS~DGtIrIWDLrt-----gk~i~t~~~~-~~~s~ItsLafSPdG~~La 1926 (2004)
-...|.++.|.+.. ..|++-..+|.++-|-+.. .+....+... ....+|.++.++|..+.|+
T Consensus 84 ~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLl 163 (282)
T PF15492_consen 84 MSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLL 163 (282)
T ss_pred cccCCccccceeeeEeeccccccccceeEEEEeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEE
Confidence 12456777776532 2466677788888777532 2333444332 2356899999999988888
Q ss_pred EEeCC----C-------eEEEEECCCCeeeEE--------------------------E---ccCCCCeEEEEEcCCCCE
Q psy8748 1927 CGSDD----N-------NVHVWDLLKTTHNGV--------------------------L---SGHENRVTSISLSPNGMA 1966 (2004)
Q Consensus 1927 SGSsD----G-------sIrIWDL~tge~l~t--------------------------L---~gHs~~VtsLaFSPDg~~ 1966 (2004)
+|+.. + -+..|.+-++.+... + ......|..|..||||..
T Consensus 164 VgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~ 243 (282)
T PF15492_consen 164 VGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSL 243 (282)
T ss_pred EeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCE
Confidence 87641 1 266676533221111 0 113557899999999999
Q ss_pred EEEEECCCeEEEEECCCC
Q psy8748 1967 LVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1967 LaSgS~DGtIrIWdlstg 1984 (2004)
||+...+|.|.+|++.+-
T Consensus 244 La~ih~sG~lsLW~iPsL 261 (282)
T PF15492_consen 244 LACIHFSGSLSLWEIPSL 261 (282)
T ss_pred EEEEEcCCeEEEEecCcc
Confidence 999999999999999884
No 314
>KOG0882|consensus
Probab=98.03 E-value=1.7e-05 Score=96.11 Aligned_cols=210 Identities=17% Similarity=0.122 Sum_probs=154.0
Q ss_pred cCccceeeeEEeCCCcEEEeecCCeEEEEECCC--CceeEEeeccccCCeEEEEECCCCCEEEEEEC-CCeEEEEECCCC
Q psy8748 1780 GYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLET--GQRIHEVAQAHIGDVVSISLSPDGQYFVTGSV-DKSCKLWDFREK 1856 (2004)
Q Consensus 1780 gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~t--g~~i~~il~~h~~~ItsLafSPdg~~LaSGS~-DGsIrIWDlrs~ 1856 (2004)
-|.+.++.+.....+.+++++.||.++.|.... +......+..|.+.|.+++.+-+|..+.+++. |..++++|+.+-
T Consensus 7 mhrd~i~hv~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~ 86 (558)
T KOG0882|consen 7 MHRDVITHVFPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENF 86 (558)
T ss_pred cccceeeeEeeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeecc
Confidence 467778888777888999999999999998654 33333446678889999999999999999777 999999999876
Q ss_pred eEEEEEecCCCCeEEEEEeC-CC---CEEE-EEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCC
Q psy8748 1857 KCVQTFFGHEADVNSVCFHP-SG---LAFA-TGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDD 1931 (2004)
Q Consensus 1857 k~I~tl~~h~s~ItsIafSP-dg---~~La-SgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsD 1931 (2004)
..+..++-. .....+.|.. .| ..++ +.-.+|.+.++|-....+...+...-|..+|.++.+.+-+..++++...
T Consensus 87 DminmiKL~-~lPg~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~ 165 (558)
T KOG0882|consen 87 DMINMIKLV-DLPGFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDIS 165 (558)
T ss_pred chhhhcccc-cCCCceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeecccc
Confidence 544333211 1111222222 22 1233 3345789999998766655555556677899999999999999999999
Q ss_pred CeEEEEECCC------CeeeEEE---------ccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy8748 1932 NNVHVWDLLK------TTHNGVL---------SGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVL 1990 (2004)
Q Consensus 1932 GsIrIWDL~t------ge~l~tL---------~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~I 1990 (2004)
|.|.-|.... .+....+ .......+++.|+|+|..+.+-+.|..|+++...+|+..+.+
T Consensus 166 gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqei 239 (558)
T KOG0882|consen 166 GMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEI 239 (558)
T ss_pred ceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhh
Confidence 9999998762 1111111 224566899999999999999999999999999998654433
No 315
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.97 E-value=0.001 Score=83.73 Aligned_cols=212 Identities=15% Similarity=0.120 Sum_probs=121.2
Q ss_pred ccccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEee--C------CCCceEEEEEec-----CC
Q psy8748 1680 VKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIP--L------RSAWVMSVAFAQ-----SG 1746 (2004)
Q Consensus 1680 lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~--~------Ht~~ItsLafSP-----dg 1746 (2004)
-.+.|..-++...++|++++.| |=.++|.|..+|.+.|.|++....+..-. . ....|+++.|.- |+
T Consensus 74 ~gf~P~~l~~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ 152 (395)
T PF08596_consen 74 EGFLPLTLLDAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDG 152 (395)
T ss_dssp EEEEEEEEE---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSS
T ss_pred cccCchhheeccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCc
Confidence 3467777888889999999997 55699999999999999997777776532 2 345688898862 22
Q ss_pred ---CEEEEeecCCeEEEEEcCC-CCCCCcceEEEEEecCccceeeeEEe-CC---------------------CcEEEee
Q psy8748 1747 ---NFVACGGMDNMCTVYDLNN-RDSTGAAKVIRELLGYEGFLSSCRFI-DD---------------------TTLLTGS 1800 (2004)
Q Consensus 1747 ---~~LaSGS~DGtIrVWDl~t-~~~~~~~k~i~sl~gh~~~Vssvafs-dd---------------------~~LlSgS 1800 (2004)
-.+++|+..|.+.+|.+.- ...............+.+.+..+... .+ ..+++..
T Consensus 153 ySSi~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvv 232 (395)
T PF08596_consen 153 YSSICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVV 232 (395)
T ss_dssp SEEEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE
T ss_pred ccceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEE
Confidence 4789999999999998852 21111122222222344444443322 10 1256667
Q ss_pred cCCeEEEEECCCCceeEEeeccccCCeEEEEE-----CCCCCEEEEEECCCeEEEEECCCCeEEEEEecCC----CCeEE
Q psy8748 1801 GDMKIVTWNLETGQRIHEVAQAHIGDVVSISL-----SPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHE----ADVNS 1871 (2004)
Q Consensus 1801 ~DGtI~IWDl~tg~~i~~il~~h~~~ItsLaf-----SPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~----s~Its 1871 (2004)
.+..++++...+.+..++.+. .......+.+ ...+..|++-..+|.|++|.+..-+.+....-.. ..+..
T Consensus 233 Se~~irv~~~~~~k~~~K~~~-~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ 311 (395)
T PF08596_consen 233 SESDIRVFKPPKSKGAHKSFD-DPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSS 311 (395)
T ss_dssp -SSEEEEE-TT---EEEEE-S-S-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT
T ss_pred cccceEEEeCCCCcccceeec-cccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccc
Confidence 788999999998887776652 2222333444 2356788888999999999999988887775432 23445
Q ss_pred EEEeCCCCEEEEEECCCeEEEEE
Q psy8748 1872 VCFHPSGLAFATGSEDKTARLFD 1894 (2004)
Q Consensus 1872 IafSPdg~~LaSgS~DGtIrIWD 1894 (2004)
..++++|..++-.+ ...+.++.
T Consensus 312 ssis~~Gdi~~~~g-psE~~l~s 333 (395)
T PF08596_consen 312 SSISRNGDIFYWTG-PSEIQLFS 333 (395)
T ss_dssp -EE-TTS-EEEE-S-SSEEEEEE
T ss_pred cEECCCCCEEEEeC-cccEEEEE
Confidence 66788887665554 33444443
No 316
>KOG2695|consensus
Probab=97.96 E-value=2.1e-05 Score=92.87 Aligned_cols=150 Identities=15% Similarity=0.185 Sum_probs=116.3
Q ss_pred EEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCC-----ceeEEEcCCCCCCCeE
Q psy8748 1840 VTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRAD-----QQIATYLPPNKNSGFT 1914 (2004)
Q Consensus 1840 aSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtg-----k~i~t~~~~~~~s~It 1914 (2004)
++.+.+-.|-+-|+.++.. ..+ ...+.|.+..|...++.++.|+.+|.|..+|++.. .+...+ .|...|+
T Consensus 228 fs~G~sqqv~L~nvetg~~-qsf-~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl---yh~Ssvt 302 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQ-QSF-QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL---YHDSSVT 302 (425)
T ss_pred ecccccceeEEEEeecccc-ccc-ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE---EcCcchh
Confidence 3444566788889887753 333 36788999999999999999999999999999865 223333 3557788
Q ss_pred EEEEcC-CCCEEEEEeCCCeEEEEECCCCee---eEEEccCCCCeEEEEE--cCCCCEEEEEECCCeEEEEECCCCeEEE
Q psy8748 1915 SCAVSS-SGRYIFCGSDDNNVHVWDLLKTTH---NGVLSGHENRVTSISL--SPNGMALVTSSWDQFVKVWQESNTIVWK 1988 (2004)
Q Consensus 1915 sLafSP-dG~~LaSGSsDGsIrIWDL~tge~---l~tL~gHs~~VtsLaF--SPDg~~LaSgS~DGtIrIWdlstg~l~k 1988 (2004)
++..-. ++.+|.+.+.+|.|.+||.+--++ +..+.||-..-.-+-+ .+....++++|+|...|||.++.|.+..
T Consensus 303 slq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~ 382 (425)
T KOG2695|consen 303 SLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLC 382 (425)
T ss_pred hhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCceee
Confidence 887766 788999999999999999987766 7788888665444433 4566788999999999999999998777
Q ss_pred EEEeec
Q psy8748 1989 VLKVYN 1994 (2004)
Q Consensus 1989 ~Ik~~~ 1994 (2004)
.++...
T Consensus 383 tipf~~ 388 (425)
T KOG2695|consen 383 TIPFPY 388 (425)
T ss_pred ccCCCC
Confidence 776443
No 317
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.95 E-value=0.0049 Score=74.39 Aligned_cols=233 Identities=18% Similarity=0.165 Sum_probs=142.8
Q ss_pred eeEEEEeC-CCCEEEEEeCCCe-EEEEECCCCceEEEeeCCCCce--EEEEEecCCCEEEEeecCCeEEEEEcCCCCCCC
Q psy8748 1695 VNSVHYSG-DSRHCVSGSLDGK-LIIWDTWTGNKTQVIPLRSAWV--MSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTG 1770 (2004)
Q Consensus 1695 VtsLaFSP-DG~~LASGS~DGt-IrVWDl~Tgk~l~ti~~Ht~~I--tsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~ 1770 (2004)
...++.+| ++..++.+-.-|+ ..+||..+++....+....+.- =.-+|++||++|++.-.|-
T Consensus 7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~-------------- 72 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDY-------------- 72 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEecccc--------------
Confidence 34778888 4555666666554 7889999999887765433321 1347999999988864320
Q ss_pred cceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEE--------
Q psy8748 1771 AAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTG-------- 1842 (2004)
Q Consensus 1771 ~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSG-------- 1842 (2004)
.+..|.|-+||...+-.....+..+.-.-..+.+.|||+.|+++
T Consensus 73 ----------------------------~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thp 124 (305)
T PF07433_consen 73 ----------------------------ETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHP 124 (305)
T ss_pred ----------------------------CCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCc
Confidence 01223444444442211112222333333445555555544443
Q ss_pred ----------ECCCeEEEEECCCCeEEEEEe----cCCCCeEEEEEeCCCCEEEEEECCCe-------EEEEEccCCcee
Q psy8748 1843 ----------SVDKSCKLWDFREKKCVQTFF----GHEADVNSVCFHPSGLAFATGSEDKT-------ARLFDIRADQQI 1901 (2004)
Q Consensus 1843 ----------S~DGsIrIWDlrs~k~I~tl~----~h~s~ItsIafSPdg~~LaSgS~DGt-------IrIWDLrtgk~i 1901 (2004)
+.+.++...|..+++.+.... -|...|+.+++.++|..++..-..|. |-+++. +..+
T Consensus 125 d~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~--g~~~ 202 (305)
T PF07433_consen 125 DSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRR--GGAL 202 (305)
T ss_pred ccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcC--CCcc
Confidence 234467777888888776633 36778999999999977666655443 334433 3323
Q ss_pred EEEcCC-----CCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCe
Q psy8748 1902 ATYLPP-----NKNSGFTSCAVSSSGRYIFCGS-DDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQF 1975 (2004)
Q Consensus 1902 ~t~~~~-----~~~s~ItsLafSPdG~~LaSGS-sDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGt 1975 (2004)
..+..+ .-...+-+++++.+|.++++.+ ..|.+.+||..+++.+.... -..+..++-.+++ +++|.+. |.
T Consensus 203 ~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~--l~D~cGva~~~~~-f~~ssG~-G~ 278 (305)
T PF07433_consen 203 RLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVP--LPDACGVAPTDDG-FLVSSGQ-GQ 278 (305)
T ss_pred eeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeeccc--cCceeeeeecCCc-eEEeCCC-cc
Confidence 333221 1235688999999999887665 46789999999999887664 3456777777776 6666553 44
No 318
>KOG2066|consensus
Probab=97.91 E-value=0.00022 Score=91.92 Aligned_cols=183 Identities=14% Similarity=0.159 Sum_probs=127.9
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCc
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGA 1771 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~ 1771 (2004)
.+.++|++++ +++++-|+.+|.|++++.. |.. .+...|... ..+|.++++|+.||.|.|-.+.+.+.
T Consensus 39 ~D~is~~av~--~~~~~~GtH~g~v~~~~~~-~~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~--- 105 (846)
T KOG2066|consen 39 NDAISCCAVH--DKFFALGTHRGAVYLTTCQ-GNP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDE--- 105 (846)
T ss_pred hhHHHHHHhh--cceeeeccccceEEEEecC-Ccc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCcc---
Confidence 4677888887 6789999999999999853 333 333344433 56799999999999999998866431
Q ss_pred ceEEEEEecCccceeeeEEeCC------CcEEEeecCCeEEEEECCC-CceeEEeeccccCCeEEEEECCCCCEEEEEEC
Q psy8748 1772 AKVIRELLGYEGFLSSCRFIDD------TTLLTGSGDMKIVTWNLET-GQRIHEVAQAHIGDVVSISLSPDGQYFVTGSV 1844 (2004)
Q Consensus 1772 ~k~i~sl~gh~~~Vssvafsdd------~~LlSgS~DGtI~IWDl~t-g~~i~~il~~h~~~ItsLafSPdg~~LaSGS~ 1844 (2004)
........++.++++.++ .++++|+..| +.++.-+- |...........|+|.++.|. |++++-++.
T Consensus 106 ----~~~~df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand 178 (846)
T KOG2066|consen 106 ----ITQYDFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWAND 178 (846)
T ss_pred ----ceeEecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecC
Confidence 112234556777777765 5699999998 77765432 111112345678899999997 888888887
Q ss_pred CCeEEEEECCCCeEEEEEecCCCC------eEEEEEeCCCCEEEEEECCCeEEEEEccC
Q psy8748 1845 DKSCKLWDFREKKCVQTFFGHEAD------VNSVCFHPSGLAFATGSEDKTARLFDIRA 1897 (2004)
Q Consensus 1845 DGsIrIWDlrs~k~I~tl~~h~s~------ItsIafSPdg~~LaSgS~DGtIrIWDLrt 1897 (2004)
+| |++||...++.+..+...... ...+.|.++.+.++ | ...+|+|..++.
T Consensus 179 ~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~LVI-G-W~d~v~i~~I~~ 234 (846)
T KOG2066|consen 179 DG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDRLVI-G-WGDSVKICSIKK 234 (846)
T ss_pred CC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCCCeEEE-e-cCCeEEEEEEec
Confidence 66 899999998887776544333 33577877765444 3 344788888873
No 319
>KOG1832|consensus
Probab=97.87 E-value=7.8e-06 Score=104.08 Aligned_cols=218 Identities=16% Similarity=0.254 Sum_probs=149.4
Q ss_pred ceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe-CCCcEEE-eecC
Q psy8748 1725 NKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI-DDTTLLT-GSGD 1802 (2004)
Q Consensus 1725 k~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs-dd~~LlS-gS~D 1802 (2004)
+..+++..|+...+|++|+-+.++|++|+..|.|++|++.++. ......+|...++.+.-+ ++...++ ++..
T Consensus 1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~------~e~s~ncH~SavT~vePs~dgs~~Ltsss~S 1165 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGS------MEESVNCHQSAVTLVEPSVDGSTQLTSSSSS 1165 (1516)
T ss_pred ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCcc------ccccccccccccccccccCCcceeeeecccc
Confidence 4445677888999999999999999999999999999998764 334556788888888776 3444443 3333
Q ss_pred C-eEEEEECCC-CceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEe----cCCCCeEEEEEeC
Q psy8748 1803 M-KIVTWNLET-GQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFF----GHEADVNSVCFHP 1876 (2004)
Q Consensus 1803 G-tI~IWDl~t-g~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~----~h~s~ItsIafSP 1876 (2004)
. -..+|++.+ +...+.+ ..-.++.|+.....-+.|+......+||+.++....++. +....-++..|+|
T Consensus 1166 ~PlsaLW~~~s~~~~~Hsf-----~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP 1240 (1516)
T KOG1832|consen 1166 SPLSALWDASSTGGPRHSF-----DEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSP 1240 (1516)
T ss_pred CchHHHhccccccCccccc-----cccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCC
Confidence 3 577899865 2233222 234578888765555667766789999999988766632 2223347889999
Q ss_pred CCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeE
Q psy8748 1877 SGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVT 1956 (2004)
Q Consensus 1877 dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~Vt 1956 (2004)
+...++ .|| .+||++..+.+..|.... ....-.|+|+|.-+++-+ .|||+++.+.++....- .-.
T Consensus 1241 ~D~LIl---ndG--vLWDvR~~~aIh~FD~ft---~~~~G~FHP~g~eVIINS-----EIwD~RTF~lLh~VP~L--dqc 1305 (1516)
T KOG1832|consen 1241 CDTLIL---NDG--VLWDVRIPEAIHRFDQFT---DYGGGGFHPSGNEVIINS-----EIWDMRTFKLLHSVPSL--DQC 1305 (1516)
T ss_pred CcceEe---eCc--eeeeeccHHHHhhhhhhe---ecccccccCCCceEEeec-----hhhhhHHHHHHhcCccc--cce
Confidence 987766 456 589999887776663221 122346999999998875 48999988776654321 124
Q ss_pred EEEEcCCCCEEE
Q psy8748 1957 SISLSPNGMALV 1968 (2004)
Q Consensus 1957 sLaFSPDg~~La 1968 (2004)
.+.|+..|..++
T Consensus 1306 ~VtFNstG~VmY 1317 (1516)
T KOG1832|consen 1306 AVTFNSTGDVMY 1317 (1516)
T ss_pred EEEeccCccchh
Confidence 456666665444
No 320
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.85 E-value=0.013 Score=76.62 Aligned_cols=284 Identities=12% Similarity=0.083 Sum_probs=169.5
Q ss_pred CCEEEEEeCCCeEEEEECCCCceEEEeeCCC-CceEE----------EEEecCCCEEEEeecCCeEEEEEcCCCCCCCcc
Q psy8748 1704 SRHCVSGSLDGKLIIWDTWTGNKTQVIPLRS-AWVMS----------VAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAA 1772 (2004)
Q Consensus 1704 G~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht-~~Its----------LafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~ 1772 (2004)
+..++.++.++.|+-.|..+|+.+..+.... ..+.. +++ .+..++.++.|+.+...|..+++.....
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~~ 146 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWSK 146 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEeec
Confidence 4567777778899999999999988775321 11111 122 2456778888999999998877543322
Q ss_pred eEEEEEecCccceeeeEEeCCCcEEEeec------CCeEEEEECCCCceeEEeecccc----------------------
Q psy8748 1773 KVIRELLGYEGFLSSCRFIDDTTLLTGSG------DMKIVTWNLETGQRIHEVAQAHI---------------------- 1824 (2004)
Q Consensus 1773 k~i~sl~gh~~~Vssvafsdd~~LlSgS~------DGtI~IWDl~tg~~i~~il~~h~---------------------- 1824 (2004)
.... .. ....+.+.-...++.++++.. +|.|..+|.++|+.+.+......
T Consensus 147 ~~~~-~~-~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~ 224 (527)
T TIGR03075 147 KNGD-YK-AGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWP 224 (527)
T ss_pred cccc-cc-ccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCC
Confidence 2110 00 001111111112445666543 68999999999987765422111
Q ss_pred --------CCe-EEEEECCCCCEEEEEECC-----C-----------eEEEEECCCCeEEEEEecCCCCeEE--------
Q psy8748 1825 --------GDV-VSISLSPDGQYFVTGSVD-----K-----------SCKLWDFREKKCVQTFFGHEADVNS-------- 1871 (2004)
Q Consensus 1825 --------~~I-tsLafSPdg~~LaSGS~D-----G-----------sIrIWDlrs~k~I~tl~~h~s~Its-------- 1871 (2004)
+.+ ..++++++.++++.+... + .|.-.|.++++....++.....+..
T Consensus 225 ~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~ 304 (527)
T TIGR03075 225 GDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMI 304 (527)
T ss_pred CCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcE
Confidence 111 134777777777776622 2 6777889999988777653332222
Q ss_pred -EEEeCCCC---EEEEEECCCeEEEEEccCCceeEEEcC----------C-CC-----------------CC--------
Q psy8748 1872 -VCFHPSGL---AFATGSEDKTARLFDIRADQQIATYLP----------P-NK-----------------NS-------- 1911 (2004)
Q Consensus 1872 -IafSPdg~---~LaSgS~DGtIrIWDLrtgk~i~t~~~----------~-~~-----------------~s-------- 1911 (2004)
+.+..+|+ .++.+..+|.+++.|.++|+.+..... . .. ..
T Consensus 305 l~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~ 384 (527)
T TIGR03075 305 LFDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGVDLKTGRPIEVPEARSADGKKGKPVGVCPGFL 384 (527)
T ss_pred EEEeccCCcEEEEEEEeCCCceEEEEECCCCceeccccccCCcccccccCCCCCCCccChhhCcCCCCCCCeeEECCCCc
Confidence 22224665 688999999999999999987522100 0 00 00
Q ss_pred ---CeEEEEEcCCCCEEEEEeCC---------------------------------CeEEEEECCCCeeeEEEccCCCCe
Q psy8748 1912 ---GFTSCAVSSSGRYIFCGSDD---------------------------------NNVHVWDLLKTTHNGVLSGHENRV 1955 (2004)
Q Consensus 1912 ---~ItsLafSPdG~~LaSGSsD---------------------------------GsIrIWDL~tge~l~tL~gHs~~V 1955 (2004)
.-..++++|+..++++...+ |.|.-+|+.+++............
T Consensus 385 Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~~~~g~l~AiD~~tGk~~W~~~~~~p~~ 464 (527)
T TIGR03075 385 GGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIKPPPDDHMGSLIAWDPITGKIVWEHKEDFPLW 464 (527)
T ss_pred CCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccCCCCCCCceeEEEEeCCCCceeeEecCCCCCC
Confidence 00125677766666544333 457778888888777665322111
Q ss_pred EEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEEe
Q psy8748 1956 TSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKV 1992 (2004)
Q Consensus 1956 tsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik~ 1992 (2004)
.+. ..-.+.+++.++.||.++.+|.++|+.+-..+.
T Consensus 465 ~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~ 500 (527)
T TIGR03075 465 GGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKT 500 (527)
T ss_pred Ccc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEeC
Confidence 221 112455777788899999999999975544443
No 321
>KOG1645|consensus
Probab=97.83 E-value=0.00054 Score=82.83 Aligned_cols=244 Identities=14% Similarity=0.065 Sum_probs=144.7
Q ss_pred cccccccccceeEEEEeCCCC-EEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCC-CEEEEeecCCeEEEEE
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSR-HCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSG-NFVACGGMDNMCTVYD 1762 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~-~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg-~~LaSGS~DGtIrVWD 1762 (2004)
..-+.+|...|.+++|||..+ ++..++.+..|+|.|+++...+..+..+ ..+.+++|.-|. +++..|..+|.|.+||
T Consensus 186 sq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD 264 (463)
T KOG1645|consen 186 SQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYD 264 (463)
T ss_pred hhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEE
Confidence 446778999999999999776 7888999999999999999999888888 679999998765 5788888999999999
Q ss_pred cCCCCCCCcceEEEEEec--CccceeeeEEe-------CCCcEEEeecCCeEEEEECCC--CceeEEeeccccCCeEEEE
Q psy8748 1763 LNNRDSTGAAKVIRELLG--YEGFLSSCRFI-------DDTTLLTGSGDMKIVTWNLET--GQRIHEVAQAHIGDVVSIS 1831 (2004)
Q Consensus 1763 l~t~~~~~~~k~i~sl~g--h~~~Vssvafs-------dd~~LlSgS~DGtI~IWDl~t--g~~i~~il~~h~~~ItsLa 1831 (2004)
++..+... ..+.+ ...++..++.. .++.++....+ ...|++.- +........+..+...++.
T Consensus 265 ~R~~~~~~-----~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele~pG~cismq 337 (463)
T KOG1645|consen 265 MRQPEGPL-----MELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELEPPGICISMQ 337 (463)
T ss_pred ccCCCchH-----hhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccCCCcceeeee
Confidence 98653211 11111 11223322222 22333333332 45565532 2222222224456667777
Q ss_pred ECCCCCEEEEEECCC-------e-EEEEECCCCeEEEEEe-cC-CCC------eEEEEEeCCCCEEE-EEECCCeEEEEE
Q psy8748 1832 LSPDGQYFVTGSVDK-------S-CKLWDFREKKCVQTFF-GH-EAD------VNSVCFHPSGLAFA-TGSEDKTARLFD 1894 (2004)
Q Consensus 1832 fSPdg~~LaSGS~DG-------s-IrIWDlrs~k~I~tl~-~h-~s~------ItsIafSPdg~~La-SgS~DGtIrIWD 1894 (2004)
+++..+.++.....+ . +.--|.++|.++...+ ++ .+. -..+.-.++.++++ +|...+.+.+||
T Consensus 338 y~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~D 417 (463)
T KOG1645|consen 338 YHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQD 417 (463)
T ss_pred ecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCCcceeEEec
Confidence 777556555544331 0 1112333444333221 11 110 01122233445544 455567899999
Q ss_pred ccCCceeEEEcCCCCCCCeEEEEEcC-CC-CEEEEEeCCCeEEEEECC
Q psy8748 1895 IRADQQIATYLPPNKNSGFTSCAVSS-SG-RYIFCGSDDNNVHVWDLL 1940 (2004)
Q Consensus 1895 Lrtgk~i~t~~~~~~~s~ItsLafSP-dG-~~LaSGSsDGsIrIWDL~ 1940 (2004)
..++....++... .++..++... +| .+|++- .|..++||..+
T Consensus 418 ~~s~evvQ~l~~~---epv~Dicp~~~n~~syLa~L-Td~~v~Iyk~e 461 (463)
T KOG1645|consen 418 PHSFEVVQTLALS---EPVLDICPNDTNGSSYLALL-TDDRVHIYKNE 461 (463)
T ss_pred cchhheeeecccC---cceeecceeecCCcchhhhe-ecceEEEEecC
Confidence 9999998888543 4565555443 33 455554 56678887643
No 322
>KOG1920|consensus
Probab=97.83 E-value=0.0023 Score=85.92 Aligned_cols=210 Identities=17% Similarity=0.211 Sum_probs=142.5
Q ss_pred ccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECC----C-
Q psy8748 1782 EGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFR----E- 1855 (2004)
Q Consensus 1782 ~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlr----s- 1855 (2004)
.+.|.++.|. +.+.++.+..+|.|.+.|..+.... +...-...|.+++|+||+..++..+.++++.+-+-. .
T Consensus 68 d~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~e--ivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT~~f~~i~E 145 (1265)
T KOG1920|consen 68 DDEIVSVQFLADTNSICVITALGDIILVDPETLELE--IVGNVDNGISAASWSPDEELLALITGRQTLLFMTKDFEPIAE 145 (1265)
T ss_pred CcceEEEEEecccceEEEEecCCcEEEEccccccee--eeeeccCceEEEeecCCCcEEEEEeCCcEEEEEeccccchhc
Confidence 4577777777 5667889999999999988876543 344567789999999999999999888877665321 0
Q ss_pred ------------------CeEEEEEecCC---------------------CCeEEEEEeCCCCEEEEEE----CC-CeEE
Q psy8748 1856 ------------------KKCVQTFFGHE---------------------ADVNSVCFHPSGLAFATGS----ED-KTAR 1891 (2004)
Q Consensus 1856 ------------------~k~I~tl~~h~---------------------s~ItsIafSPdg~~LaSgS----~D-GtIr 1891 (2004)
|+....+.+.. +.=+.|.|-.||.+|++.. .+ .+|+
T Consensus 146 ~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~fAVs~~~~~~~~Rkir 225 (1265)
T KOG1920|consen 146 KPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYFAVSFVESETGTRKIR 225 (1265)
T ss_pred cccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEEEEEEEeccCCceeEE
Confidence 11111222111 1123589999999998843 23 7899
Q ss_pred EEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEe---CCCeEEEEECCCCeeeEE----EccCCCCeEEEEEcCCC
Q psy8748 1892 LFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGS---DDNNVHVWDLLKTTHNGV----LSGHENRVTSISLSPNG 1964 (2004)
Q Consensus 1892 IWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGS---sDGsIrIWDL~tge~l~t----L~gHs~~VtsLaFSPDg 1964 (2004)
+||.. |..-..- ....+--.+++|-|.|..+++-. +|+.|.+|.- +|-.... +.....+|..++|+.++
T Consensus 226 V~drE-g~Lns~s--e~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr-NGL~hg~f~l~~p~de~~ve~L~Wns~s 301 (1265)
T KOG1920|consen 226 VYDRE-GALNSTS--EPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER-NGLRHGEFVLPFPLDEKEVEELAWNSNS 301 (1265)
T ss_pred Eeccc-chhhccc--CcccccccceeecCCCCeEeeeeecCCCCcEEEEec-CCccccccccCCcccccchheeeecCCC
Confidence 99976 4332222 12223456899999999998754 4567999984 4433332 23344559999999999
Q ss_pred CEEEE---EECCCeEEEEECCCCeEEEEEEeecCCCC
Q psy8748 1965 MALVT---SSWDQFVKVWQESNTIVWKVLKVYNLEKK 1998 (2004)
Q Consensus 1965 ~~LaS---gS~DGtIrIWdlstg~l~k~Ik~~~~h~~ 1998 (2004)
..|+. +.....|++|-..+- .|-.-+.+.....
T Consensus 302 diLAv~~~~~e~~~v~lwt~~Ny-hWYLKq~l~~~~~ 337 (1265)
T KOG1920|consen 302 DILAVVTSNLENSLVQLWTTGNY-HWYLKQELQFSQK 337 (1265)
T ss_pred CceeeeecccccceEEEEEecCe-EEEEEEEEecccc
Confidence 99988 555566999998875 4766666655444
No 323
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=97.83 E-value=0.0046 Score=80.27 Aligned_cols=239 Identities=15% Similarity=0.156 Sum_probs=143.5
Q ss_pred CEEEEEeCCCeEEEEECCCCceEEEeeCCCCc-----eE-EEEEecCCCEEEEee---------cCCeEEEEEcCCCCCC
Q psy8748 1705 RHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAW-----VM-SVAFAQSGNFVACGG---------MDNMCTVYDLNNRDST 1769 (2004)
Q Consensus 1705 ~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~-----It-sLafSPdg~~LaSGS---------~DGtIrVWDl~t~~~~ 1769 (2004)
..++.++.+|.|+-+|.++|+.+..+...... +. +..+. +..++.++ .+|.+..+|..+++..
T Consensus 111 ~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~~~~~~~~i~ssP~v~--~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~ 188 (488)
T cd00216 111 RKVFFGTFDGRLVALDAETGKQVWKFGNNDQVPPGYTMTGAPTIV--KKLVIIGSSGAEFFACGVRGALRAYDVETGKLL 188 (488)
T ss_pred CeEEEecCCCeEEEEECCCCCEeeeecCCCCcCcceEecCCCEEE--CCEEEEeccccccccCCCCcEEEEEECCCCcee
Confidence 56777888999999999999999887654321 11 11222 34455553 3678888888776533
Q ss_pred CcceEEEE----Ee---------cC-cccee-eeEEe-CCCcEEEeecCC------------------eEEEEECCCCce
Q psy8748 1770 GAAKVIRE----LL---------GY-EGFLS-SCRFI-DDTTLLTGSGDM------------------KIVTWNLETGQR 1815 (2004)
Q Consensus 1770 ~~~k~i~s----l~---------gh-~~~Vs-svafs-dd~~LlSgS~DG------------------tI~IWDl~tg~~ 1815 (2004)
........ .. .. ...+. ...+. .++.+++++.++ .|.-+|.++|+.
T Consensus 189 W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~ 268 (488)
T cd00216 189 WRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWASPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKV 268 (488)
T ss_pred eEeeccCCCcCCCCCCCCCcceecCCCCCccCCeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCE
Confidence 22211100 00 00 01111 12222 345677777665 799999999998
Q ss_pred eEEeeccccC-----CeEEEEEC----CCCC---EEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEE
Q psy8748 1816 IHEVAQAHIG-----DVVSISLS----PDGQ---YFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFAT 1883 (2004)
Q Consensus 1816 i~~il~~h~~-----~ItsLafS----Pdg~---~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaS 1883 (2004)
..+....+.. ......+. -++. .+++++.+|.+...|.++++.+...... ...++.+| ..++.
T Consensus 269 ~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~---~~~~~~~~--~~vyv 343 (488)
T cd00216 269 KWFYQTTPHDLWDYDGPNQPSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEV---EQPMAYDP--GLVYL 343 (488)
T ss_pred EEEeeCCCCCCcccccCCCCeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEee---ccccccCC--ceEEE
Confidence 8765322211 00000111 1333 6788889999999999999987765421 11233333 23333
Q ss_pred E------------------ECCCeEEEEEccCCceeEEEcCCCCC------CCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1884 G------------------SEDKTARLFDIRADQQIATYLPPNKN------SGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1884 g------------------S~DGtIrIWDLrtgk~i~t~~~~~~~------s~ItsLafSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
+ ..+|.+.-.|..+|+.+.+....... .....-.....+..+++|+.||.|+.+|.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~ 423 (488)
T cd00216 344 GAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDA 423 (488)
T ss_pred ccccccccCcccccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEEC
Confidence 2 24688999999999998887543111 11111111125678999999999999999
Q ss_pred CCCeeeEEEcc
Q psy8748 1940 LKTTHNGVLSG 1950 (2004)
Q Consensus 1940 ~tge~l~tL~g 1950 (2004)
.+|+.+...+-
T Consensus 424 ~tG~~lW~~~~ 434 (488)
T cd00216 424 TTGKELWKFRT 434 (488)
T ss_pred CCCceeeEEEC
Confidence 99999988764
No 324
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=97.80 E-value=3.1e-05 Score=64.59 Aligned_cols=38 Identities=34% Similarity=0.677 Sum_probs=36.0
Q ss_pred cccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy8748 1683 MPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWD 1720 (2004)
Q Consensus 1683 ~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWD 1720 (2004)
++++++.+|.+.|++++|+|++.+|++|+.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 46788999999999999999999999999999999997
No 325
>KOG2066|consensus
Probab=97.74 E-value=0.00053 Score=88.59 Aligned_cols=183 Identities=15% Similarity=0.177 Sum_probs=129.2
Q ss_pred ceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEe
Q psy8748 1784 FLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFF 1863 (2004)
Q Consensus 1784 ~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~ 1863 (2004)
.++|+++ .+..++.|+.+|.|++++....- . .. ..|... ..+|.++++|+.||+|.|..+-+.+...++
T Consensus 41 ~is~~av-~~~~~~~GtH~g~v~~~~~~~~~-~-~~-~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~- 109 (846)
T KOG2066|consen 41 AISCCAV-HDKFFALGTHRGAVYLTTCQGNP-K-TN-FDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQY- 109 (846)
T ss_pred HHHHHHh-hcceeeeccccceEEEEecCCcc-c-cc-cccccc------ccCCceEEEecCCCcEEEeeccCCccceeE-
Confidence 3444444 45678899999999999876443 1 11 123222 568999999999999999998887766555
Q ss_pred cCCCCeEEEEEeCC-----CCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEE
Q psy8748 1864 GHEADVNSVCFHPS-----GLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWD 1938 (2004)
Q Consensus 1864 ~h~s~ItsIafSPd-----g~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWD 1938 (2004)
....++.+++++|+ .+.+++||.-| +.++.-+-.............++|.++.|. |++||=++++| |+|||
T Consensus 110 df~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd 185 (846)
T KOG2066|consen 110 DFKRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYD 185 (846)
T ss_pred ecCCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCC-cEEEe
Confidence 34678999999997 56799999888 887764432222222334566889999995 78898888777 99999
Q ss_pred CCCCeeeEEEccCCCCe------EEEEEcCCCCEEEEEECCCeEEEEECCC
Q psy8748 1939 LLKTTHNGVLSGHENRV------TSISLSPNGMALVTSSWDQFVKVWQESN 1983 (2004)
Q Consensus 1939 L~tge~l~tL~gHs~~V------tsLaFSPDg~~LaSgS~DGtIrIWdlst 1983 (2004)
+.+++.+..+......+ ..+.|.++.+ |+.|- .-+|+|..+..
T Consensus 186 ~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~~~-LVIGW-~d~v~i~~I~~ 234 (846)
T KOG2066|consen 186 TPTRQRLTNIPPPSQSVRPELFPPHLHWQDEDR-LVIGW-GDSVKICSIKK 234 (846)
T ss_pred ccccceeeccCCCCCCCCcccCCCceEecCCCe-EEEec-CCeEEEEEEec
Confidence 99988887775433333 4567776654 44443 34688888873
No 326
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.74 E-value=0.012 Score=71.81 Aligned_cols=270 Identities=15% Similarity=0.150 Sum_probs=156.9
Q ss_pred CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEee----------cCCeEEEEEcCCCCCCCcceEEEEEecC-c
Q psy8748 1714 GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGG----------MDNMCTVYDLNNRDSTGAAKVIRELLGY-E 1782 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS----------~DGtIrVWDl~t~~~~~~~k~i~sl~gh-~ 1782 (2004)
++++|+|..+++.+..+... ..-.+..+|+++.+.+++ ....|.+||..+.....+ ..+... .
T Consensus 17 ~rv~viD~d~~k~lGmi~~g--~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~E----I~iP~k~R 90 (342)
T PF06433_consen 17 SRVYVIDADSGKLLGMIDTG--FLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGE----IEIPPKPR 90 (342)
T ss_dssp EEEEEEETTTTEEEEEEEEE--SSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEE----EEETTS-B
T ss_pred ceEEEEECCCCcEEEEeecc--cCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccce----EecCCcch
Confidence 47999999999888777642 233467899999887743 345799999987532111 111111 1
Q ss_pred ----cceeeeEEeCCC-cEEE--eecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECC-
Q psy8748 1783 ----GFLSSCRFIDDT-TLLT--GSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFR- 1854 (2004)
Q Consensus 1783 ----~~Vssvafsdd~-~LlS--gS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlr- 1854 (2004)
........+.++ .+++ .+-...|.+.|+..++.+..+.. .+ +..+--. ..+-|.+-|.||.+.-..+.
T Consensus 91 ~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~--PG-C~~iyP~-~~~~F~~lC~DGsl~~v~Ld~ 166 (342)
T PF06433_consen 91 AQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDT--PG-CWLIYPS-GNRGFSMLCGDGSLLTVTLDA 166 (342)
T ss_dssp --BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEG--TS-EEEEEEE-ETTEEEEEETTSCEEEEEETS
T ss_pred heecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecC--CC-EEEEEec-CCCceEEEecCCceEEEEECC
Confidence 111223334333 3332 33445677778877777655522 11 1222111 23457888899999988887
Q ss_pred CCeEEEEE----ecCCCCe-EEEEEeCCCCEEEEEECCCeEEEEEccCCceeE--EEcCCC--------CCCCeEEEEEc
Q psy8748 1855 EKKCVQTF----FGHEADV-NSVCFHPSGLAFATGSEDKTARLFDIRADQQIA--TYLPPN--------KNSGFTSCAVS 1919 (2004)
Q Consensus 1855 s~k~I~tl----~~h~s~I-tsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~--t~~~~~--------~~s~ItsLafS 1919 (2004)
.|+...+. .....++ ..-++...+..++.-+.+|.|+-.|+....... .+.... ..++..-++++
T Consensus 167 ~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~ 246 (342)
T PF06433_consen 167 DGKEAQKSTKVFDPDDDPLFEHPAYSRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYH 246 (342)
T ss_dssp TSSEEEEEEEESSTTTS-B-S--EEETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEE
T ss_pred CCCEeEeeccccCCCCcccccccceECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeec
Confidence 45443221 1222222 233455556666668889999999987654321 121100 01234557888
Q ss_pred CCCCEEEEEeCC---C-------eEEEEECCCCeeeEEEccCCCCeEEEEEcCCCC-EEEEEE-CCCeEEEEECCCCeEE
Q psy8748 1920 SSGRYIFCGSDD---N-------NVHVWDLLKTTHNGVLSGHENRVTSISLSPNGM-ALVTSS-WDQFVKVWQESNTIVW 1987 (2004)
Q Consensus 1920 PdG~~LaSGSsD---G-------sIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~-~LaSgS-~DGtIrIWdlstg~l~ 1987 (2004)
+..+.|++-... | .|.+||+.+++.+..+.. ..++.+|+.+.+.+ +|++.+ .++.+.+||..+|+..
T Consensus 247 ~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~ 325 (342)
T PF06433_consen 247 AASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLV 325 (342)
T ss_dssp TTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EE
T ss_pred cccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEE
Confidence 766666554322 1 488889999999998864 34577999988655 666554 5899999999999887
Q ss_pred EEEEeec
Q psy8748 1988 KVLKVYN 1994 (2004)
Q Consensus 1988 k~Ik~~~ 1994 (2004)
+.++...
T Consensus 326 ~~~~~lG 332 (342)
T PF06433_consen 326 RSIEQLG 332 (342)
T ss_dssp EEE---S
T ss_pred eehhccC
Confidence 7777554
No 327
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.73 E-value=0.015 Score=74.20 Aligned_cols=75 Identities=20% Similarity=0.225 Sum_probs=63.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1908 NKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1908 ~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
.....+.+++++|+...++.|+.||.|.+||...+.... ..+.-..+.++|+|+|..+++|+..|.+.+||+.-.
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~--~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLL--AKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeee--eeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 345679999999999999999999999999987664332 234566899999999999999999999999998743
No 328
>KOG3617|consensus
Probab=97.73 E-value=0.00038 Score=89.11 Aligned_cols=262 Identities=11% Similarity=0.094 Sum_probs=147.1
Q ss_pred eeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceE
Q psy8748 1695 VNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKV 1774 (2004)
Q Consensus 1695 VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~ 1774 (2004)
+++++|+|..-.|+.|-.-|.+.+|...+.+.......|..+|..+.|+++|+.++++..-|.+.+|..+..........
T Consensus 62 atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~q~~~~ 141 (1416)
T KOG3617|consen 62 ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEIQTSNI 141 (1416)
T ss_pred hhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeeeccccccchh
Confidence 45699999988899998899999999877777767778999999999999999999999999999999874321111111
Q ss_pred EEEEecCccceeeeEEe--CC-------CcEEEeecCCeEE-EEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEEC
Q psy8748 1775 IRELLGYEGFLSSCRFI--DD-------TTLLTGSGDMKIV-TWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSV 1844 (2004)
Q Consensus 1775 i~sl~gh~~~Vssvafs--dd-------~~LlSgS~DGtI~-IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~ 1844 (2004)
.... ....++-++|- .+ ...++.+++..+- .++.+........ .+ .-.|+|..|+.++.
T Consensus 142 ~~he--l~~~ltl~cfRL~~~~Ee~~~laKaaVtgDe~alD~~fnwk~~~a~rs~--~k-------sgv~~g~~F~~~~~ 210 (1416)
T KOG3617|consen 142 MQHE--LNDQLTLWCFRLSYDREEKFKLAKAAVTGDESALDEPFNWKESLAERSD--EK-------SGVPKGTEFLFAGK 210 (1416)
T ss_pred hhhH--hhceeeEEEEecCCChHHhhhhhhhhccCchhhhcccccCccchhhccc--cc-------cCCCCCcEEEEEcC
Confidence 1110 12223333332 22 1233444443332 2222211100000 11 12467888999999
Q ss_pred CCeEEEEECCCCeEEEEEec----------CCCCeEEEEEeCCCCEEE------------------EEECCCeEEEEEcc
Q psy8748 1845 DKSCKLWDFREKKCVQTFFG----------HEADVNSVCFHPSGLAFA------------------TGSEDKTARLFDIR 1896 (2004)
Q Consensus 1845 DGsIrIWDlrs~k~I~tl~~----------h~s~ItsIafSPdg~~La------------------SgS~DGtIrIWDLr 1896 (2004)
+|+|+..|-. +++....+. ....|.++.-.-...++. .|+..|.|-+=.-.
T Consensus 211 ~GtVyyvdq~-g~~~~V~k~dS~vQmLf~~~~eai~~i~e~lr~~l~~v~~~G~~ee~~~vk~sgk~GgrqGgiA~sEss 289 (1416)
T KOG3617|consen 211 SGTVYYVDQN-GRQRTVHKLDSEVQMLFMGYCEAISIIIEFLRDCLIFVLAKGTSEERCAVKVSGKLGGRQGGIACSESS 289 (1416)
T ss_pred CceEEEEcCC-CcEEEEEEccchHHHHHhcccceEEEEeeeceeeEEEecCCCchHHhhhhhhccccCCccCcccccccc
Confidence 9999988843 333222211 112222221110000000 01111111111100
Q ss_pred CCc--eeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC-CC------CeeeEEEcc---CCCCeEEEEEcCCC
Q psy8748 1897 ADQ--QIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL-LK------TTHNGVLSG---HENRVTSISLSPNG 1964 (2004)
Q Consensus 1897 tgk--~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL-~t------ge~l~tL~g---Hs~~VtsLaFSPDg 1964 (2004)
|- ...++ ....+..++|++++..+..++.|...|.+.+|-- .+ +.....+.+ -.+.|+.+.|.|-.
T Consensus 290 -GvLr~~eKy-g~e~ge~~~c~cY~~~~~~l~agt~~gnv~~w~~v~~~f~g~p~~d~w~l~~~~e~~g~I~~i~Wg~~k 367 (1416)
T KOG3617|consen 290 -GVLRKSEKY-GLELGEGILCMCYGEKEIRLWAGTKEGNVTIWLDVNKGFQGDPTIDVWTLNGKRESLGKISLIRWGPIK 367 (1416)
T ss_pred -ccccCCcch-hhhcCCceEEEEEeccceEEEecccCCcEEEeeecCccccCCCCcceEEecCchhhccceEEEEecccc
Confidence 00 00111 1123457999999999999999999999999953 22 122333332 35679999998865
Q ss_pred CEEEEE
Q psy8748 1965 MALVTS 1970 (2004)
Q Consensus 1965 ~~LaSg 1970 (2004)
..++.-
T Consensus 368 ~~~avn 373 (1416)
T KOG3617|consen 368 STAAVN 373 (1416)
T ss_pred chhhhh
Confidence 544433
No 329
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=97.72 E-value=8.2e-05 Score=62.07 Aligned_cols=39 Identities=31% Similarity=0.555 Sum_probs=37.0
Q ss_pred CeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Q psy8748 1942 TTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQ 1980 (2004)
Q Consensus 1942 ge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWd 1980 (2004)
|+++..+.+|.+.|++++|+|++.+|++|+.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 467889999999999999999999999999999999997
No 330
>KOG1645|consensus
Probab=97.71 E-value=0.0023 Score=77.66 Aligned_cols=256 Identities=14% Similarity=0.189 Sum_probs=148.4
Q ss_pred EEEEECCCCceEEEeeCCCCceEEEEEecCCC-EEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe--C
Q psy8748 1716 LIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGN-FVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI--D 1792 (2004)
Q Consensus 1716 IrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~-~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs--d 1792 (2004)
+++.+..+.+....+..+...|.+++|+|..+ .+..++.+..|++.|+++. .....+..+ ..+++++|. +
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~------~~vssy~a~-~~~wSC~wDlde 247 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETS------CVVSSYIAY-NQIWSCCWDLDE 247 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccc------eeeeheecc-CCceeeeeccCC
Confidence 55666556666666678888999999999877 7888999999999999864 333444444 778888887 3
Q ss_pred CCcEEEeecCCeEEEEECCCCceeEEeecc--ccCCeEEEEEC------CCCCEEEEEECCCeEEEEECCC--C--eEEE
Q psy8748 1793 DTTLLTGSGDMKIVTWNLETGQRIHEVAQA--HIGDVVSISLS------PDGQYFVTGSVDKSCKLWDFRE--K--KCVQ 1860 (2004)
Q Consensus 1793 d~~LlSgS~DGtI~IWDl~tg~~i~~il~~--h~~~ItsLafS------Pdg~~LaSGS~DGsIrIWDlrs--~--k~I~ 1860 (2004)
.+.+++|..+|.|.+||++..+.....+.+ ...+|..++.- +.|.+++....+ ...|...- + -++.
T Consensus 248 ~h~IYaGl~nG~VlvyD~R~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vl 325 (463)
T KOG1645|consen 248 RHVIYAGLQNGMVLVYDMRQPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVL 325 (463)
T ss_pred cceeEEeccCceEEEEEccCCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCccc
Confidence 356889999999999999876543222111 22334443332 234444444432 45565432 1 1122
Q ss_pred EEecCCCCeEEEEEeCCCCEEEEEECCC-e------EE-EEEccCCceeEEEcCCCCCCC-----e-EEEEEcCCCCEEE
Q psy8748 1861 TFFGHEADVNSVCFHPSGLAFATGSEDK-T------AR-LFDIRADQQIATYLPPNKNSG-----F-TSCAVSSSGRYIF 1926 (2004)
Q Consensus 1861 tl~~h~s~ItsIafSPdg~~LaSgS~DG-t------Ir-IWDLrtgk~i~t~~~~~~~s~-----I-tsLafSPdG~~La 1926 (2004)
.+ +..+...++.+++..++++...... + |- --|..+|..+........+.. - ..+.-.++.++|+
T Consensus 326 el-e~pG~cismqy~~~snh~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv 404 (463)
T KOG1645|consen 326 EL-EPPGICISMQYHGVSNHLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIV 404 (463)
T ss_pred cc-CCCcceeeeeecCccceEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEE
Confidence 22 2244555666666445544433321 0 00 112223333222211110000 0 1122233455554
Q ss_pred -EEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcC--CCCEEEEEECCCeEEEEECCC
Q psy8748 1927 -CGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSP--NGMALVTSSWDQFVKVWQESN 1983 (2004)
Q Consensus 1927 -SGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSP--Dg~~LaSgS~DGtIrIWdlst 1983 (2004)
+|+..+.+.+||..+++.+.++.- ..+|.+++... .+.+|+.-. |..++||+.+.
T Consensus 405 ~~gd~tn~lil~D~~s~evvQ~l~~-~epv~Dicp~~~n~~syLa~LT-d~~v~Iyk~es 462 (463)
T KOG1645|consen 405 VVGDSTNELILQDPHSFEVVQTLAL-SEPVLDICPNDTNGSSYLALLT-DDRVHIYKNES 462 (463)
T ss_pred EecCCcceeEEeccchhheeeeccc-CcceeecceeecCCcchhhhee-cceEEEEecCC
Confidence 455668899999999999998864 47888887654 344666666 55788887653
No 331
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.68 E-value=0.031 Score=71.10 Aligned_cols=267 Identities=13% Similarity=0.091 Sum_probs=140.2
Q ss_pred EEEeCCCCEEEEEeCC----------C-eEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCC
Q psy8748 1698 VHYSGDSRHCVSGSLD----------G-KLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNR 1766 (2004)
Q Consensus 1698 LaFSPDG~~LASGS~D----------G-tIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~ 1766 (2004)
++.+|.|.-+|...++ . .|.||+ ..|+.+..+.-..+.|.++.|..+ ..|++...||.+++||+...
T Consensus 34 va~a~~gGpIAi~~d~~k~~~~~~~~p~~I~iys-~sG~ll~~i~w~~~~iv~~~wt~~-e~LvvV~~dG~v~vy~~~G~ 111 (410)
T PF04841_consen 34 VAVAPYGGPIAIIRDESKLVPVGSAKPNSIQIYS-SSGKLLSSIPWDSGRIVGMGWTDD-EELVVVQSDGTVRVYDLFGE 111 (410)
T ss_pred EEEcCCCceEEEEecCcccccccCCCCcEEEEEC-CCCCEeEEEEECCCCEEEEEECCC-CeEEEEEcCCEEEEEeCCCc
Confidence 4555666666655443 1 599998 477788777665589999999875 55566678999999998632
Q ss_pred CCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccC---------CeEE-EEECCCC
Q psy8748 1767 DSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIG---------DVVS-ISLSPDG 1836 (2004)
Q Consensus 1767 ~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~---------~Its-LafSPdg 1836 (2004)
.............-....+....+..++ +++-+.++.+++.+-.......+....... .... ..++.+.
T Consensus 112 ~~fsl~~~i~~~~v~e~~i~~~~~~~~G-ivvLt~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~ 190 (410)
T PF04841_consen 112 FQFSLGEEIEEEKVLECRIFAIWFYKNG-IVVLTGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDR 190 (410)
T ss_pred eeechhhhccccCcccccccccccCCCC-EEEECCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCc
Confidence 1000000111111111112222333334 344445565555533222211011000000 0000 2233344
Q ss_pred CEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEE
Q psy8748 1837 QYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSC 1916 (2004)
Q Consensus 1837 ~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsL 1916 (2004)
...+....++.+.+.+-...+. + ...+++..|+.||+|++++.-..+|.+.+.+.+-.+....+... .......+
T Consensus 191 ~~~i~~~~g~~i~~i~~~~~~~---i-~~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~-~~~~p~~~ 265 (410)
T PF04841_consen 191 VVEILLANGETIYIIDENSFKQ---I-DSDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTD-SKSPPKQM 265 (410)
T ss_pred ceEEEEecCCEEEEEEcccccc---c-cCCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecC-cCCCCcEE
Confidence 4445555555566444332211 1 23468999999999999999999999999987666666555433 22345667
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEE
Q psy8748 1917 AVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKV 1989 (2004)
Q Consensus 1917 afSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~ 1989 (2004)
.|.-+.-.++.- ...+.++. ..... +.|.-++..++..-.|| |||..-+.-+.++.
T Consensus 266 ~WCG~dav~l~~--~~~l~lvg-----------~~~~~---~~~~~~~~~~l~~E~DG-~riit~~~~~~l~~ 321 (410)
T PF04841_consen 266 AWCGNDAVVLSW--EDELLLVG-----------PDGDS---ISFWYDGPVILVSEIDG-VRIITSTSHEFLQR 321 (410)
T ss_pred EEECCCcEEEEe--CCEEEEEC-----------CCCCc---eEEeccCceEEeccCCc-eEEEeCCceEEEEE
Confidence 776443222221 22333332 12222 34444455555556677 88887766544433
No 332
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.68 E-value=0.005 Score=77.66 Aligned_cols=277 Identities=14% Similarity=0.171 Sum_probs=148.0
Q ss_pred ceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCC---CC
Q psy8748 1694 KVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDS---TG 1770 (2004)
Q Consensus 1694 ~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~---~~ 1770 (2004)
.|+.+.|+++..-|++|...|.|.||.+...+.-. ......-..+.+.+ ....++.-.+-|+..... ..
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~--~~~~~~~~~~~~~~------~~~~~~~~~l~di~~r~~~~~~~ 74 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYG--NREQPPDLDYNFRR------FSLNNSPGKLTDISDRAPPSLKE 74 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE--------------------S--------GGGSS-SEEE-GGG--TT-SE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCC--ccCCCcccCccccc------ccccCCCcceEEehhhCCccccc
Confidence 58899999999999999999999999865433221 00001111111111 001112223344433211 11
Q ss_pred cceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEee-cc------ccCCeEEEEECC-----CC--
Q psy8748 1771 AAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVA-QA------HIGDVVSISLSP-----DG-- 1836 (2004)
Q Consensus 1771 ~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il-~~------h~~~ItsLafSP-----dg-- 1836 (2004)
.+....-+....+.|++++.++=+.+++|..+|.+.+.|++....+.... .. ....++++.|.- |+
T Consensus 75 gf~P~~l~~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~yS 154 (395)
T PF08596_consen 75 GFLPLTLLDAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYS 154 (395)
T ss_dssp EEEEEEEE---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSE
T ss_pred ccCchhheeccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCccc
Confidence 23444455556899999999999999999999999999998877765531 11 234578888863 33
Q ss_pred -CEEEEEECCCeEEEEECC--C-CeE----EEEEecCCCCeEEEE-EeCC-----------------C---CEEEEEECC
Q psy8748 1837 -QYFVTGSVDKSCKLWDFR--E-KKC----VQTFFGHEADVNSVC-FHPS-----------------G---LAFATGSED 1887 (2004)
Q Consensus 1837 -~~LaSGS~DGsIrIWDlr--s-~k~----I~tl~~h~s~ItsIa-fSPd-----------------g---~~LaSgS~D 1887 (2004)
-++++|+..|.+.+|.+. . +.. ......+.++|..|. ++.+ | +-+++...+
T Consensus 155 Si~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe 234 (395)
T PF08596_consen 155 SICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSE 234 (395)
T ss_dssp EEEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-S
T ss_pred ceEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcc
Confidence 478999999999999764 1 211 112224566666665 3221 0 123444447
Q ss_pred CeEEEEEccCCceeEEEcCCCCCCCeEEEEE-----cCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCC----CCeEEE
Q psy8748 1888 KTARLFDIRADQQIATYLPPNKNSGFTSCAV-----SSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHE----NRVTSI 1958 (2004)
Q Consensus 1888 GtIrIWDLrtgk~i~t~~~~~~~s~ItsLaf-----SPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs----~~VtsL 1958 (2004)
..++++...+.+...+.. ........+.+ ...+..|++-..+|.|++|.+...+.+....-+. ..+...
T Consensus 235 ~~irv~~~~~~k~~~K~~--~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~s 312 (395)
T PF08596_consen 235 SDIRVFKPPKSKGAHKSF--DDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSS 312 (395)
T ss_dssp SEEEEE-TT---EEEEE---SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-
T ss_pred cceEEEeCCCCcccceee--ccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCcccccccccc
Confidence 789999998888776664 21122333444 2357788888999999999999988887776432 234566
Q ss_pred EEcCCCCEEEEEECCCeEEEEEC
Q psy8748 1959 SLSPNGMALVTSSWDQFVKVWQE 1981 (2004)
Q Consensus 1959 aFSPDg~~LaSgS~DGtIrIWdl 1981 (2004)
.++++|..++-.|.. .+.+|.+
T Consensus 313 sis~~Gdi~~~~gps-E~~l~sv 334 (395)
T PF08596_consen 313 SISRNGDIFYWTGPS-EIQLFSV 334 (395)
T ss_dssp EE-TTS-EEEE-SSS-EEEEEEE
T ss_pred EECCCCCEEEEeCcc-cEEEEEE
Confidence 778888877666533 4444443
No 333
>KOG3621|consensus
Probab=97.61 E-value=0.0067 Score=78.07 Aligned_cols=143 Identities=14% Similarity=0.155 Sum_probs=98.4
Q ss_pred cccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE-eeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCC
Q psy8748 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQV-IPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDST 1769 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~t-i~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~ 1769 (2004)
|...|.--+++..+++++.|+.-|.+++|+-..|..... ..+..+.+..++.+++..+++.|+..|.|.++-++.....
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~ 111 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPR 111 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCC
Confidence 445666667778899999999999999999665544332 2334556677788888999999999999999998874322
Q ss_pred CcceEEEEEecCccceeeeEEeCCC-cEEEeecCCeEEEEECCCCc---eeEEeeccccCCeEEEEEC
Q psy8748 1770 GAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQ---RIHEVAQAHIGDVVSISLS 1833 (2004)
Q Consensus 1770 ~~~k~i~sl~gh~~~Vssvafsdd~-~LlSgS~DGtI~IWDl~tg~---~i~~il~~h~~~ItsLafS 1833 (2004)
........-..|...|+++.|+.+. .+++|...|+|..-.+++.. ..........+.|..+.+.
T Consensus 112 ~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~ 179 (726)
T KOG3621|consen 112 DLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYL 179 (726)
T ss_pred cceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecc
Confidence 2111112222367899999999654 59999999999998887621 1111122345566666665
No 334
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.57 E-value=0.0093 Score=72.05 Aligned_cols=187 Identities=16% Similarity=0.188 Sum_probs=131.4
Q ss_pred eEEEEECCCCceeEEeeccccCC-eEEEEECCCCCEEEEEEC-----CCeEEEEECC-CCeEEEEEecCCCCeEEEEEeC
Q psy8748 1804 KIVTWNLETGQRIHEVAQAHIGD-VVSISLSPDGQYFVTGSV-----DKSCKLWDFR-EKKCVQTFFGHEADVNSVCFHP 1876 (2004)
Q Consensus 1804 tI~IWDl~tg~~i~~il~~h~~~-ItsLafSPdg~~LaSGS~-----DGsIrIWDlr-s~k~I~tl~~h~s~ItsIafSP 1876 (2004)
...+||..+++....+......- --.-+|++||++|++.-. .|.|-|||.. ..+.+..+..+.-....+.+.|
T Consensus 29 ~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~p 108 (305)
T PF07433_consen 29 FALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMP 108 (305)
T ss_pred EEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcC
Confidence 35678888887765442111111 113579999999998643 4789999998 6677888888887788899999
Q ss_pred CCCEEEEEEC------------------CCeEEEEEccCCceeEEEcC--CCCCCCeEEEEEcCCCCEEEEEeCCCe---
Q psy8748 1877 SGLAFATGSE------------------DKTARLFDIRADQQIATYLP--PNKNSGFTSCAVSSSGRYIFCGSDDNN--- 1933 (2004)
Q Consensus 1877 dg~~LaSgS~------------------DGtIrIWDLrtgk~i~t~~~--~~~~s~ItsLafSPdG~~LaSGSsDGs--- 1933 (2004)
||+.|+++.. +..+...|..+|+.+.+... ..+...+..+++.++|..++..-..|.
T Consensus 109 DG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~ 188 (305)
T PF07433_consen 109 DGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGD 188 (305)
T ss_pred CCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCc
Confidence 9988777642 22466677888888877655 446678999999999988777655442
Q ss_pred ----EEEEECCCCeeeEEEc-------cCCCCeEEEEEcCCCCEE-EEEECCCeEEEEECCCCeEEEEEEe
Q psy8748 1934 ----VHVWDLLKTTHNGVLS-------GHENRVTSISLSPNGMAL-VTSSWDQFVKVWQESNTIVWKVLKV 1992 (2004)
Q Consensus 1934 ----IrIWDL~tge~l~tL~-------gHs~~VtsLaFSPDg~~L-aSgS~DGtIrIWdlstg~l~k~Ik~ 1992 (2004)
|.+++. ++.+..+. .-.+.|-+|+++.++..+ +|+-.-|.+.+||..++........
T Consensus 189 ~~PLva~~~~--g~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~~~~l 257 (305)
T PF07433_consen 189 APPLVALHRR--GGALRLLPAPEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLGSVPL 257 (305)
T ss_pred cCCeEEEEcC--CCcceeccCChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEeecccc
Confidence 344442 33233332 235779999999999877 4555678999999999976655443
No 335
>KOG2114|consensus
Probab=97.54 E-value=0.0025 Score=83.10 Aligned_cols=194 Identities=14% Similarity=0.200 Sum_probs=129.5
Q ss_pred EEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCC-eEEEEECCCCCEEEEEECCC-----eEEEEECCCC------
Q psy8748 1789 RFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGD-VVSISLSPDGQYFVTGSVDK-----SCKLWDFREK------ 1856 (2004)
Q Consensus 1789 afsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~-ItsLafSPdg~~LaSGS~DG-----sIrIWDlrs~------ 1856 (2004)
..+.++.++.|+.+|.|.+++-. .....-+..+... |..+....+.++|++.+.|+ .++|||++..
T Consensus 31 ~~s~~~~vvigt~~G~V~~Ln~s--~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP 108 (933)
T KOG2114|consen 31 CSSSTGSVVIGTADGRVVILNSS--FQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSP 108 (933)
T ss_pred EcCCCceEEEeeccccEEEeccc--ceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCc
Confidence 33456779999999999888743 2221223444444 44444444446787777665 4899998632
Q ss_pred eEE--EEEec-----CCCCeEEEEEeCCCCEEEEEECCCeEEEEEcc--CCceeEEEcCCCCCCCeEEEEEcCCCCEEEE
Q psy8748 1857 KCV--QTFFG-----HEADVNSVCFHPSGLAFATGSEDKTARLFDIR--ADQQIATYLPPNKNSGFTSCAVSSSGRYIFC 1927 (2004)
Q Consensus 1857 k~I--~tl~~-----h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLr--tgk~i~t~~~~~~~s~ItsLafSPdG~~LaS 1927 (2004)
.++ ..+.+ ...++.+++.+.+-+.+++|-.+|.|..+.-+ ..+-.+.........+|+.+++..++..++-
T Consensus 109 ~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lF 188 (933)
T KOG2114|consen 109 QCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLF 188 (933)
T ss_pred ceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEE
Confidence 233 12222 35678899999999999999999999998532 1111122223455688999999999987443
Q ss_pred EeCCCeEEEEECCCCee-eEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCe
Q psy8748 1928 GSDDNNVHVWDLLKTTH-NGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTI 1985 (2004)
Q Consensus 1928 GSsDGsIrIWDL~tge~-l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~ 1985 (2004)
......|.+|.+....+ ...+..|+..+.|.+|++....+++|+. ..+.+|+.++.+
T Consensus 189 v~Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~sd~~~ 246 (933)
T KOG2114|consen 189 VATTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDSDGRG 246 (933)
T ss_pred EEecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEecC-ceEEEEcCCCcc
Confidence 34456799999874442 4457788889999999876665666653 458999888654
No 336
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.53 E-value=0.032 Score=72.84 Aligned_cols=270 Identities=14% Similarity=0.098 Sum_probs=153.1
Q ss_pred CCCCEEEEEeC-CCeEEEEECCCCceEEEeeC-CCCceEEEEEe--cCCCEEEEeec-------CCeEEEEEcCCCCCCC
Q psy8748 1702 GDSRHCVSGSL-DGKLIIWDTWTGNKTQVIPL-RSAWVMSVAFA--QSGNFVACGGM-------DNMCTVYDLNNRDSTG 1770 (2004)
Q Consensus 1702 PDG~~LASGS~-DGtIrVWDl~Tgk~l~ti~~-Ht~~ItsLafS--Pdg~~LaSGS~-------DGtIrVWDl~t~~~~~ 1770 (2004)
.||+|++.-.. +..|-..++...++-+.+.. ....+.++.|- |+..++++++. ||.. +++...
T Consensus 139 ydGr~~findk~n~Rvari~l~~~~~~~i~~iPn~~~~Hg~~~~~~p~t~yv~~~~e~~~PlpnDGk~-l~~~~e----- 212 (635)
T PRK02888 139 YDGRYLFINDKANTRVARIRLDVMKCDKITELPNVQGIHGLRPQKIPRTGYVFCNGEFRIPLPNDGKD-LDDPKK----- 212 (635)
T ss_pred cceeEEEEecCCCcceEEEECccEeeceeEeCCCccCccccCccccCCccEEEeCcccccccCCCCCE-eecccc-----
Confidence 47888887664 56677777766655444432 22345555554 56666666653 4431 222211
Q ss_pred cceEEEEEecCcc-ceeeeEEeCCCcEEEeecCCeEEEEE---CCCCceeEEeeccccCCeEEEEEC--------CCCCE
Q psy8748 1771 AAKVIRELLGYEG-FLSSCRFIDDTTLLTGSGDMKIVTWN---LETGQRIHEVAQAHIGDVVSISLS--------PDGQY 1838 (2004)
Q Consensus 1771 ~~k~i~sl~gh~~-~Vssvafsdd~~LlSgS~DGtI~IWD---l~tg~~i~~il~~h~~~ItsLafS--------Pdg~~ 1838 (2004)
....+..+..... .+..+.....-..+..+.||...... .+.+..+..+...... ..+.|+ ++|++
T Consensus 213 y~~~vSvID~etmeV~~qV~Vdgnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d--~~vvfni~~iea~vkdGK~ 290 (635)
T PRK02888 213 YRSLFTAVDAETMEVAWQVMVDGNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERD--WVVVFNIARIEEAVKAGKF 290 (635)
T ss_pred eeEEEEEEECccceEEEEEEeCCCcccceECCCCCEEEEeccCcccCcceeeeccccCc--eEEEEchHHHHHhhhCCCE
Confidence 1111111211111 11222222333455666676655444 3455544333222222 334443 46776
Q ss_pred EEEEECCCeEEEEECCC----C-eEEEEEecCCCCeEEEEEeCCCCEEEEEEC-CCeEEEEEccCCce------------
Q psy8748 1839 FVTGSVDKSCKLWDFRE----K-KCVQTFFGHEADVNSVCFHPSGLAFATGSE-DKTARLFDIRADQQ------------ 1900 (2004)
Q Consensus 1839 LaSGS~DGsIrIWDlrs----~-k~I~tl~~h~s~ItsIafSPdg~~LaSgS~-DGtIrIWDLrtgk~------------ 1900 (2004)
...+ ++.|.++|.++ + ..+..+ .-......+.++|||+++++++. +++|.|+|+.+.+.
T Consensus 291 ~~V~--gn~V~VID~~t~~~~~~~v~~yI-PVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~v 367 (635)
T PRK02888 291 KTIG--GSKVPVVDGRKAANAGSALTRYV-PVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAV 367 (635)
T ss_pred EEEC--CCEEEEEECCccccCCcceEEEE-ECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceE
Confidence 6653 67899999988 3 334444 45667789999999999777664 88999999987553
Q ss_pred eEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC----------CeeeEEEccCCCCeEE-----EEEcCCCC
Q psy8748 1901 IATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLK----------TTHNGVLSGHENRVTS-----ISLSPNGM 1965 (2004)
Q Consensus 1901 i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~t----------ge~l~tL~gHs~~Vts-----LaFSPDg~ 1965 (2004)
.... .....-...+|+++|+...+-.-|..|..||+.+ ...+..+.-|-.+-.- =.-.+||+
T Consensus 368 vaev---evGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~~~~~g~t~~~dgk 444 (635)
T PRK02888 368 VAEP---ELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHNHASMGETKEADGK 444 (635)
T ss_pred EEee---ccCCCcceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCccceeeecCCCcCCCCCC
Confidence 2222 1123345678999999888888899999999865 3344444434332211 12357899
Q ss_pred EEEEEE---CCCe----------EEEEECCCCe
Q psy8748 1966 ALVTSS---WDQF----------VKVWQESNTI 1985 (2004)
Q Consensus 1966 ~LaSgS---~DGt----------IrIWdlstg~ 1985 (2004)
+|++.. .|+. -++.|+++.+
T Consensus 445 ~l~~~nk~skdrfl~vgpl~pen~qlidIsgdk 477 (635)
T PRK02888 445 WLVSLNKFSKDRFLPVGPLHPENDQLIDISGDK 477 (635)
T ss_pred EEEEccccccccccCCCCCCCCcceeEEccCCe
Confidence 988874 3432 3566776553
No 337
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.51 E-value=0.15 Score=64.38 Aligned_cols=268 Identities=17% Similarity=0.187 Sum_probs=171.9
Q ss_pred EEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecC-CeEEEEEcCCCCCCCcceEEEEEecCc-cceeeeEEe-C
Q psy8748 1716 LIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMD-NMCTVYDLNNRDSTGAAKVIRELLGYE-GFLSSCRFI-D 1792 (2004)
Q Consensus 1716 IrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~D-GtIrVWDl~t~~~~~~~k~i~sl~gh~-~~Vssvafs-d 1792 (2004)
+.+++..+......+..+. ....+...+++..+...... ..+...+... .......... .....+... .
T Consensus 13 ~~v~~~~~~~~~~~~~~~~-~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~-------n~~~~~~~~g~~~p~~i~v~~~ 84 (381)
T COG3391 13 VSVINTGTNKVTAAISLGR-GPGGVAVNPDGTQVYVANSGSNDVSVIDATS-------NTVTQSLSVGGVYPAGVAVNPA 84 (381)
T ss_pred eEEEeecccEEEEEeecCC-CCceeEEcCccCEEEEEeecCceeeeccccc-------ceeeeeccCCCccccceeeCCC
Confidence 6666655555555555443 45667788888544443322 2343333321 1111111111 222333443 3
Q ss_pred CCc-EEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEEC---CCeEEEEECCCCeEEEEEecCCCC
Q psy8748 1793 DTT-LLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSV---DKSCKLWDFREKKCVQTFFGHEAD 1868 (2004)
Q Consensus 1793 d~~-LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~---DGsIrIWDlrs~k~I~tl~~h~s~ 1868 (2004)
+.. ++....++.|.+.|..+.........+. ....++++++++.++++.. ++.+.+.|..+.+.......-..+
T Consensus 85 ~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~--~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P 162 (381)
T COG3391 85 GNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL--GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP 162 (381)
T ss_pred CCeEEEecCCCCeEEEEcCcccceeeEeeecc--CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc
Confidence 333 4445556899999988877776664444 5678999999988888766 688999999988888775444444
Q ss_pred eEEEEEeCCCCEEEEEE-CCCeEEEEEccCCceeE-EEc-CCCCCCCeEEEEEcCCCCEEEEEeCC---CeEEEEECCCC
Q psy8748 1869 VNSVCFHPSGLAFATGS-EDKTARLFDIRADQQIA-TYL-PPNKNSGFTSCAVSSSGRYIFCGSDD---NNVHVWDLLKT 1942 (2004)
Q Consensus 1869 ItsIafSPdg~~LaSgS-~DGtIrIWDLrtgk~i~-t~~-~~~~~s~ItsLafSPdG~~LaSGSsD---GsIrIWDL~tg 1942 (2004)
..+++.|+|+.+++.. .++.|.+.|........ .-. .......-..+.++++|.++.+.... +.+...|..++
T Consensus 163 -~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~ 241 (381)
T COG3391 163 -TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATG 241 (381)
T ss_pred -ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCc
Confidence 8999999999766655 68899999977655442 100 01122334678999999977766554 58999999888
Q ss_pred eeeEEEccCCC-CeEEEEEcCCCCEEEEEEC-CCeEEEEECCCCeEEEEEEeec
Q psy8748 1943 THNGVLSGHEN-RVTSISLSPNGMALVTSSW-DQFVKVWQESNTIVWKVLKVYN 1994 (2004)
Q Consensus 1943 e~l~tL~gHs~-~VtsLaFSPDg~~LaSgS~-DGtIrIWdlstg~l~k~Ik~~~ 1994 (2004)
........-.. ....+.++|+|..+.+... .+.+.+-|..+...........
T Consensus 242 ~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~ 295 (381)
T COG3391 242 NVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGN 295 (381)
T ss_pred eEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccc
Confidence 87765221122 5677899999999988844 4889999988876555544433
No 338
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.44 E-value=0.0081 Score=78.12 Aligned_cols=134 Identities=13% Similarity=0.055 Sum_probs=91.2
Q ss_pred CCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEE---------------------------------------
Q psy8748 1845 DKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGS--------------------------------------- 1885 (2004)
Q Consensus 1845 DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS--------------------------------------- 1885 (2004)
.+.+.++|..+.+....+.-. .....++++++|+++++.+
T Consensus 214 ~~~vSvID~etmeV~~qV~Vd-gnpd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~iea~vkdGK~~~ 292 (635)
T PRK02888 214 RSLFTAVDAETMEVAWQVMVD-GNLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARIEEAVKAGKFKT 292 (635)
T ss_pred eEEEEEEECccceEEEEEEeC-CCcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHHHHhhhCCCEEE
Confidence 345777787776665555332 2445677788888777665
Q ss_pred -CCCeEEEEEccC----C-ceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeC-CCeEEEEECCCCee------------eE
Q psy8748 1886 -EDKTARLFDIRA----D-QQIATYLPPNKNSGFTSCAVSSSGRYIFCGSD-DNNVHVWDLLKTTH------------NG 1946 (2004)
Q Consensus 1886 -~DGtIrIWDLrt----g-k~i~t~~~~~~~s~ItsLafSPdG~~LaSGSs-DGsIrIWDL~tge~------------l~ 1946 (2004)
.+++|.++|.++ + +....+. .......+.++|||+++++++. +++|.|+|+.+.+. ..
T Consensus 293 V~gn~V~VID~~t~~~~~~~v~~yIP---VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vva 369 (635)
T PRK02888 293 IGGSKVPVVDGRKAANAGSALTRYVP---VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVA 369 (635)
T ss_pred ECCCEEEEEECCccccCCcceEEEEE---CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEE
Confidence 124577777776 2 2333332 2234577899999999887665 88999999987553 23
Q ss_pred EEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q psy8748 1947 VLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESN 1983 (2004)
Q Consensus 1947 tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlst 1983 (2004)
...- ...-...+|.++|....|.--|..|..|++..
T Consensus 370 evev-GlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 370 EPEL-GLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred eecc-CCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 3322 23345678999999888889999999999886
No 339
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.41 E-value=0.023 Score=72.69 Aligned_cols=222 Identities=12% Similarity=0.098 Sum_probs=118.2
Q ss_pred CCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECC
Q psy8748 1732 LRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLE 1811 (2004)
Q Consensus 1732 ~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~ 1811 (2004)
........+.++|+|++++++ .||.-.++..... .... .+......|...+.+++-...+.|.++.--
T Consensus 30 ~~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~~------r~k~-----~G~g~~~vw~~~n~yAv~~~~~~I~I~kn~ 97 (443)
T PF04053_consen 30 SCEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALAW------RNKA-----FGSGLSFVWSSRNRYAVLESSSTIKIYKNF 97 (443)
T ss_dssp E-SS--SEEEE-TTSSEEEEE-ETTEEEEEETTTT------EEEE-----EEE-SEEEE-TSSEEEEE-TTS-EEEEETT
T ss_pred CCCcCCeeEEECCCCCEEEEE-cCCEEEEEEccCC------cccc-----cCceeEEEEecCccEEEEECCCeEEEEEcC
Confidence 344557899999999999985 4677777774321 1111 233445677777888888888999996332
Q ss_pred CCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEE
Q psy8748 1812 TGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTAR 1891 (2004)
Q Consensus 1812 tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIr 1891 (2004)
+......+. ....+..+-. |..|...+. +.|.+||+.+++.++.+... +|..+.|+++|++++..+.+ .+.
T Consensus 98 ~~~~~k~i~--~~~~~~~If~---G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~ 168 (443)
T PF04053_consen 98 KNEVVKSIK--LPFSVEKIFG---GNLLGVKSS-DFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIY 168 (443)
T ss_dssp EE-TT-------SS-EEEEE----SSSEEEEET-TEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEE
T ss_pred ccccceEEc--CCcccceEEc---CcEEEEECC-CCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEE
Confidence 222211221 1123444433 777777764 48999999999999988643 48999999999999998755 688
Q ss_pred EEEccCC-----------ceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEE
Q psy8748 1892 LFDIRAD-----------QQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISL 1960 (2004)
Q Consensus 1892 IWDLrtg-----------k~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaF 1960 (2004)
+++.+.. ...... ......|.+.+|..+ .++-.+.. .++. +..|+. ..+..-..++.=+.+
T Consensus 169 il~~~~~~~~~~~~~g~e~~f~~~--~E~~~~IkSg~W~~d--~fiYtT~~-~lkY--l~~Ge~-~~i~~ld~~~yllgy 240 (443)
T PF04053_consen 169 ILKYNLEAVAAIPEEGVEDAFELI--HEISERIKSGCWVED--CFIYTTSN-HLKY--LVNGET-GIIAHLDKPLYLLGY 240 (443)
T ss_dssp EEEE-HHHHHHBTTTB-GGGEEEE--EEE-S--SEEEEETT--EEEEE-TT-EEEE--EETTEE-EEEEE-SS--EEEEE
T ss_pred EEEecchhcccccccCchhceEEE--EEecceeEEEEEEcC--EEEEEcCC-eEEE--EEcCCc-ceEEEcCCceEEEEE
Confidence 8775533 011111 011245777778755 44433333 6665 333332 222222445666677
Q ss_pred cCCCCEEEEEECCCeEEEEECC
Q psy8748 1961 SPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1961 SPDg~~LaSgS~DGtIrIWdls 1982 (2004)
.+..+.++....|+.|..+.++
T Consensus 241 ~~~~~~ly~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 241 LPKENRLYLIDRDGNVISYELD 262 (443)
T ss_dssp ETTTTEEEEE-TT--EEEEE--
T ss_pred EccCCEEEEEECCCCEEEEEEC
Confidence 7777788888888888888765
No 340
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.40 E-value=0.078 Score=65.02 Aligned_cols=243 Identities=17% Similarity=0.198 Sum_probs=145.1
Q ss_pred EEEEeCCCCEEEEEeC----------CCeEEEEECCCCceEEEeeCCCC-------ceEEEEEecCCCEEEEeec--CCe
Q psy8748 1697 SVHYSGDSRHCVSGSL----------DGKLIIWDTWTGNKTQVIPLRSA-------WVMSVAFAQSGNFVACGGM--DNM 1757 (2004)
Q Consensus 1697 sLaFSPDG~~LASGS~----------DGtIrVWDl~Tgk~l~ti~~Ht~-------~ItsLafSPdg~~LaSGS~--DGt 1757 (2004)
.+..+||++.+++++. .-.|.+||..+-.....+..... ......++.|++++++... --.
T Consensus 40 ~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~S 119 (342)
T PF06433_consen 40 NVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATS 119 (342)
T ss_dssp EEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEE
T ss_pred ceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCe
Confidence 4678899998886532 34699999999988776543322 1233567777877766543 246
Q ss_pred EEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECC-CCceeEEe---eccccCCeE-EEEE
Q psy8748 1758 CTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLE-TGQRIHEV---AQAHIGDVV-SISL 1832 (2004)
Q Consensus 1758 IrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~-tg~~i~~i---l~~h~~~It-sLaf 1832 (2004)
|.|.|+..+ +....+.- .++. .+.-..+..|.+-|.||.+....+. .|+...+. +.....++. .-++
T Consensus 120 VtVVDl~~~------kvv~ei~~-PGC~-~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~ 191 (342)
T PF06433_consen 120 VTVVDLAAK------KVVGEIDT-PGCW-LIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAY 191 (342)
T ss_dssp EEEEETTTT------EEEEEEEG-TSEE-EEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EE
T ss_pred EEEEECCCC------ceeeeecC-CCEE-EEEecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccce
Confidence 777777643 33332221 1221 1222244568899999999999887 44443221 222222222 2334
Q ss_pred CCCCCEEEEEECCCeEEEEECCCCeE--EEEEecC----------CCCeEEEEEeCCCCEEEEEEC---CC-------eE
Q psy8748 1833 SPDGQYFVTGSVDKSCKLWDFREKKC--VQTFFGH----------EADVNSVCFHPSGLAFATGSE---DK-------TA 1890 (2004)
Q Consensus 1833 SPdg~~LaSGS~DGsIrIWDlrs~k~--I~tl~~h----------~s~ItsIafSPdg~~LaSgS~---DG-------tI 1890 (2004)
...+..++..+.+|.|+-.|+..... ...+..- .+.-.-+++++..+.|++.-. +| .|
T Consensus 192 ~~~~~~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteV 271 (342)
T PF06433_consen 192 SRDGGRLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEV 271 (342)
T ss_dssp ETTTTEEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEE
T ss_pred ECCCCeEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEE
Confidence 44555666678899999999876542 2222110 122345778876666555332 22 48
Q ss_pred EEEEccCCceeEEEcCCCCCCCeEEEEEcCCCC-EEEEEe-CCCeEEEEECCCCeeeEEEcc
Q psy8748 1891 RLFDIRADQQIATYLPPNKNSGFTSCAVSSSGR-YIFCGS-DDNNVHVWDLLKTTHNGVLSG 1950 (2004)
Q Consensus 1891 rIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~-~LaSGS-sDGsIrIWDL~tge~l~tL~g 1950 (2004)
.+||+.+++.+.++... ..+.++.++.+.+ +|++.+ .+|.+.+||..+|+.+..+..
T Consensus 272 Wv~D~~t~krv~Ri~l~---~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 272 WVYDLKTHKRVARIPLE---HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEEETTTTEEEEEEEEE---EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred EEEECCCCeEEEEEeCC---CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 88999999999988543 3466889998765 565544 579999999999999988864
No 341
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=97.38 E-value=0.14 Score=63.98 Aligned_cols=274 Identities=16% Similarity=0.180 Sum_probs=131.5
Q ss_pred EEEEeCCCCEEEEEeC-C--CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcce
Q psy8748 1697 SVHYSGDSRHCVSGSL-D--GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAK 1773 (2004)
Q Consensus 1697 sLaFSPDG~~LASGS~-D--GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k 1773 (2004)
.=+|.+||+.|+-++. | ..+.+.|+.+++..+...+.........++++++.++-......++..|+++.+ ..
T Consensus 40 ~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e----~~ 115 (386)
T PF14583_consen 40 QNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLE----ER 115 (386)
T ss_dssp S--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT------EE
T ss_pred CCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCc----EE
Confidence 3467789987665554 4 457777999998887666543434456778888887766556678888887753 22
Q ss_pred EEEEEecCccceeeeEEe--CCCcEEEee-----------------------cCCeEEEEECCCCceeEEeeccccCCeE
Q psy8748 1774 VIRELLGYEGFLSSCRFI--DDTTLLTGS-----------------------GDMKIVTWNLETGQRIHEVAQAHIGDVV 1828 (2004)
Q Consensus 1774 ~i~sl~gh~~~Vssvafs--dd~~LlSgS-----------------------~DGtI~IWDl~tg~~i~~il~~h~~~It 1828 (2004)
.+... .........|. .+...+++. -...|...|+.+|+..... .....+.
T Consensus 116 ~vy~~--p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~--~~~~wlg 191 (386)
T PF14583_consen 116 VVYEV--PDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVF--EDTDWLG 191 (386)
T ss_dssp EEEE----TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEE--EESS-EE
T ss_pred EEEEC--CcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEE--ecCcccc
Confidence 22222 22333223332 223333222 1235667788887754222 3455677
Q ss_pred EEEECCCCCEEEEEECCC-----eEEEEECC-CCeEEEEEecCC--CCeEEEEEeCCCCEEEEEEC-----CCeEEEEEc
Q psy8748 1829 SISLSPDGQYFVTGSVDK-----SCKLWDFR-EKKCVQTFFGHE--ADVNSVCFHPSGLAFATGSE-----DKTARLFDI 1895 (2004)
Q Consensus 1829 sLafSPdg~~LaSGS~DG-----sIrIWDlr-s~k~I~tl~~h~--s~ItsIafSPdg~~LaSgS~-----DGtIrIWDL 1895 (2004)
.+.|+|....++.-+..| .-+||-++ .+...+.+..+. ..+..=-|.|||..+..-+. +..|.-+|.
T Consensus 192 H~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~i~y~~~~~~~~~~~i~~~d~ 271 (386)
T PF14583_consen 192 HVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGSTIWYDSYTPGGQDFWIAGYDP 271 (386)
T ss_dssp EEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS-EEEEEEETTT--EEEEEE-T
T ss_pred CcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCEEEEEeecCCCCceEEEeeCC
Confidence 889999665555544433 12555443 233334443332 23444568899987665332 335777788
Q ss_pred cCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCC----------------eEEEEECCCCeeeEEEc---------c
Q psy8748 1896 RADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDN----------------NVHVWDLLKTTHNGVLS---------G 1950 (2004)
Q Consensus 1896 rtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDG----------------sIrIWDL~tge~l~tL~---------g 1950 (2004)
.+++....... ........++||++++-=+.|. -|+++++..+....... +
T Consensus 272 ~t~~~~~~~~~----p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~ 347 (386)
T PF14583_consen 272 DTGERRRLMEM----PWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDG 347 (386)
T ss_dssp TT--EEEEEEE-----SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTT
T ss_pred CCCCceEEEeC----CceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecC
Confidence 87765433221 2345667788998876433332 46678887766532221 1
Q ss_pred CCC-CeEEEEEcCCCCEEE-EEECCCeEEEEECC
Q psy8748 1951 HEN-RVTSISLSPNGMALV-TSSWDQFVKVWQES 1982 (2004)
Q Consensus 1951 Hs~-~VtsLaFSPDg~~La-SgS~DGtIrIWdls 1982 (2004)
|.. .=-...|+|||++++ ++...|...||-++
T Consensus 348 ~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v~ 381 (386)
T PF14583_consen 348 DRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLVE 381 (386)
T ss_dssp BSSTT----EE-TTSSEEEEEE-TTSS-EEEEEE
T ss_pred CCccCCCCCccCCCCCEEEEECCCCCCccEEEEe
Confidence 111 124679999999865 45567877777543
No 342
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.37 E-value=0.081 Score=65.93 Aligned_cols=262 Identities=18% Similarity=0.194 Sum_probs=140.7
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEee-CC----------------CCceEEEEEecCCCEEEEeec
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIP-LR----------------SAWVMSVAFAQSGNFVACGGM 1754 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~-~H----------------t~~ItsLafSPdg~~LaSGS~ 1754 (2004)
...+....|||+|+++|-.. ++.|.+++..++...+... +. -+.-.++.|+||+++|+....
T Consensus 42 ~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~ 120 (353)
T PF00930_consen 42 PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRF 120 (353)
T ss_dssp ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEE
T ss_pred ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEE
Confidence 56788999999999999885 5789999987774443221 20 112356789999999887654
Q ss_pred C-CeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecC--CeEEEEECCCCceeE-Eee---ccccCCe
Q psy8748 1755 D-NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGD--MKIVTWNLETGQRIH-EVA---QAHIGDV 1827 (2004)
Q Consensus 1755 D-GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~D--GtI~IWDl~tg~~i~-~il---~~h~~~I 1827 (2004)
| ..|+.+.+........ ....+..+.+.. +|..+ -.+.++|+.+++... ... ......+
T Consensus 121 d~~~v~~~~~~~~~~~~~---------~yp~~~~~~YPk-----~G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl 186 (353)
T PF00930_consen 121 DEREVPEYPLPDYSPPDS---------QYPEVESIRYPK-----AGDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYL 186 (353)
T ss_dssp E-TTS-EEEEEEESSSTE---------SS-EEEEEE--B-----TTS---EEEEEEEESSSTCCCEE---HHHHTSSEEE
T ss_pred CCcCCceEEeeccCCccc---------cCCcccccccCC-----CCCcCCceEEEEEECCCCcEEEeeeccccCCCccCc
Confidence 4 3444443321110000 001222222221 11111 246678888877532 111 2345568
Q ss_pred EEEEECCCCCEEEEEE--CCC---eEEEEECCCCeEEEEEe-cCCCCe---EEEEEe-CCCC-EEEEEECCCeEEEE--E
Q psy8748 1828 VSISLSPDGQYFVTGS--VDK---SCKLWDFREKKCVQTFF-GHEADV---NSVCFH-PSGL-AFATGSEDKTARLF--D 1894 (2004)
Q Consensus 1828 tsLafSPdg~~LaSGS--~DG---sIrIWDlrs~k~I~tl~-~h~s~I---tsIafS-Pdg~-~LaSgS~DGtIrIW--D 1894 (2004)
..+.|.++++.+++.- .+. .+.++|..++....... .....| ....|. +++. ++.....||.-++| +
T Consensus 187 ~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~ 266 (353)
T PF00930_consen 187 TRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYD 266 (353)
T ss_dssp EEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEE
T ss_pred ccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEc
Confidence 8999999988444433 222 47777887665433222 222222 355555 5554 45555577765554 5
Q ss_pred ccCCceeEEEcCCCCCCCeE-EEEEcCCCCEEE-EEeCC----CeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEE
Q psy8748 1895 IRADQQIATYLPPNKNSGFT-SCAVSSSGRYIF-CGSDD----NNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALV 1968 (2004)
Q Consensus 1895 Lrtgk~i~t~~~~~~~s~It-sLafSPdG~~La-SGSsD----GsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~La 1968 (2004)
...+. .. ....+ .-.|. .+.++++++.|+ ++..+ ..++..++..+.....+....+.-..+.|+|+|++++
T Consensus 267 ~~~~~-~~-~lT~G-~~~V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~~~~~~~~Spdg~y~v 343 (353)
T PF00930_consen 267 LDGGK-PR-QLTSG-DWEVTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDGDHYSASFSPDGKYYV 343 (353)
T ss_dssp TTSSE-EE-ESS-S-SS-EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTEEEESSTTSSTTEEEEE-TTSSEEE
T ss_pred ccccc-ee-ccccC-ceeecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCCCceEEEECCCCCEEE
Confidence 44443 22 32223 34453 478888877655 55442 2566667662334455543333337999999999876
Q ss_pred EEE
Q psy8748 1969 TSS 1971 (2004)
Q Consensus 1969 SgS 1971 (2004)
-..
T Consensus 344 ~~~ 346 (353)
T PF00930_consen 344 DTY 346 (353)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 343
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.36 E-value=0.071 Score=65.40 Aligned_cols=219 Identities=14% Similarity=0.158 Sum_probs=130.0
Q ss_pred CeEEEEECCCCceEEEeeCC-CCceEEEEEec---C----CCEEEEeec---------C-CeEEEEEcCCC-CCCCcceE
Q psy8748 1714 GKLIIWDTWTGNKTQVIPLR-SAWVMSVAFAQ---S----GNFVACGGM---------D-NMCTVYDLNNR-DSTGAAKV 1774 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~ti~~H-t~~ItsLafSP---d----g~~LaSGS~---------D-GtIrVWDl~t~-~~~~~~k~ 1774 (2004)
+.|++.|..+.+.+..+... ...+.+++... + ..++++|+. . |.|.++++... ......+.
T Consensus 2 s~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~ 81 (321)
T PF03178_consen 2 SSIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKL 81 (321)
T ss_dssp -EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEE
T ss_pred cEEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEE
Confidence 36888998888877766532 33455554432 2 467777753 2 99999999863 11112232
Q ss_pred EEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCc-eeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy8748 1775 IRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQ-RIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDF 1853 (2004)
Q Consensus 1775 i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~-~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDl 1853 (2004)
+.. ....+.|.++....+. + +++.++.|.+|++...+ ............++++... ++++++|+....+.++..
T Consensus 82 i~~-~~~~g~V~ai~~~~~~-l-v~~~g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~--~~~I~vgD~~~sv~~~~~ 156 (321)
T PF03178_consen 82 IHS-TEVKGPVTAICSFNGR-L-VVAVGNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF--KNYILVGDAMKSVSLLRY 156 (321)
T ss_dssp EEE-EEESS-EEEEEEETTE-E-EEEETTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred EEE-EeecCcceEhhhhCCE-E-EEeecCEEEEEEccCcccchhhheecceEEEEEEecc--ccEEEEEEcccCEEEEEE
Confidence 222 2346778888877544 3 34445899999998888 4444333344467777765 669999998888887754
Q ss_pred CC-CeEEEEE--ecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccC-------Cc-eeEEEcCCCCCCCeEEE---EEc
Q psy8748 1854 RE-KKCVQTF--FGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRA-------DQ-QIATYLPPNKNSGFTSC---AVS 1919 (2004)
Q Consensus 1854 rs-~k~I~tl--~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrt-------gk-~i~t~~~~~~~s~ItsL---afS 1919 (2004)
+. ...+..+ ......++++.|-++++.++++..+|.+.++.... +. .+.....-.....|+++ ++.
T Consensus 157 ~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~ 236 (321)
T PF03178_consen 157 DEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLI 236 (321)
T ss_dssp ETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS
T ss_pred EccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEee
Confidence 43 2222222 22345688889987767999999999999998762 22 22221111223456666 444
Q ss_pred C--CC------CEEEEEeCCCeEEEE
Q psy8748 1920 S--SG------RYIFCGSDDNNVHVW 1937 (2004)
Q Consensus 1920 P--dG------~~LaSGSsDGsIrIW 1937 (2004)
| .+ ..++.++.+|.|.+.
T Consensus 237 ~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 237 PRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp --SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred ecCCCCcccccceEEEEecCCEEEEE
Confidence 4 22 247888899988843
No 344
>KOG1275|consensus
Probab=97.35 E-value=0.0026 Score=83.13 Aligned_cols=181 Identities=16% Similarity=0.196 Sum_probs=134.2
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCc
Q psy8748 1703 DSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYE 1782 (2004)
Q Consensus 1703 DG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~ 1782 (2004)
++..++.||-...+..+|+.+++..+......+.|.-|+. +++++++|...|+|.+-|.++ .+.+.++..|.
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s------~~~iht~~aHs 217 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNS------FETIHTFDAHS 217 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCc------Cceeeeeeccc
Confidence 3456777777778889999888888777666655666654 489999999999999999874 57788899999
Q ss_pred cceeeeEEeCCCcEEEeec---------CCeEEEEECCCCceeEEeeccccCCeEEEEECCC-CCEEEEEECCCeEEEEE
Q psy8748 1783 GFLSSCRFIDDTTLLTGSG---------DMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPD-GQYFVTGSVDKSCKLWD 1852 (2004)
Q Consensus 1783 ~~Vssvafsdd~~LlSgS~---------DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPd-g~~LaSGS~DGsIrIWD 1852 (2004)
+.+..+... ++.++++|. |.-|++||++..+.+..+ .......-+.|+|. ...+++++..|...+.|
T Consensus 218 ~siSDfDv~-GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI--~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd 294 (1118)
T KOG1275|consen 218 GSISDFDVQ-GNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPI--QFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVD 294 (1118)
T ss_pred cceeeeecc-CCeEEEeecccccccccccchhhhhhhhhhhccCCc--ccccCchhhhhcccccceEEEEecccceeecc
Confidence 998877654 456666654 456899999887765333 11122245677774 34678888899999999
Q ss_pred ---CCCC-eEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEE
Q psy8748 1853 ---FREK-KCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFD 1894 (2004)
Q Consensus 1853 ---lrs~-k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWD 1894 (2004)
+.+. ..+..+......+..++++++|+.++.|..+|.|.+|.
T Consensus 295 ~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 295 TATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred ccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 3333 22344444556699999999999999999999999997
No 345
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.29 E-value=0.097 Score=62.40 Aligned_cols=234 Identities=15% Similarity=0.110 Sum_probs=132.7
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEE------
Q psy8748 1702 GDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVI------ 1775 (2004)
Q Consensus 1702 PDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i------ 1775 (2004)
..++.|+.|+.+| +.+++.........+. +...|..+...++-+.+++-+ ||.+.+++++...........
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~~~~~i~-~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~ 81 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPSKPTRIL-KLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSR 81 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCccceeEe-ecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccc
Confidence 4578899999988 9999983333322222 223399999999888777665 499999999765432211100
Q ss_pred --EEEecCccceeeeE---EeCCCcEEEeecCCeEEEEECCCC-----ceeEEeeccccCCeEEEEECCCCCEEEEEECC
Q psy8748 1776 --RELLGYEGFLSSCR---FIDDTTLLTGSGDMKIVTWNLETG-----QRIHEVAQAHIGDVVSISLSPDGQYFVTGSVD 1845 (2004)
Q Consensus 1776 --~sl~gh~~~Vssva---fsdd~~LlSgS~DGtI~IWDl~tg-----~~i~~il~~h~~~ItsLafSPdg~~LaSGS~D 1845 (2004)
.........+...+ ...+...++......|.+|..... ....++ .....+.+++|. ++.+++|..+
T Consensus 82 ~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~--~lp~~~~~i~~~--~~~i~v~~~~ 157 (275)
T PF00780_consen 82 SLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEI--SLPDPPSSIAFL--GNKICVGTSK 157 (275)
T ss_pred cccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEE--EcCCCcEEEEEe--CCEEEEEeCC
Confidence 00111122233333 123334555555568888877653 233333 345778999998 6678888755
Q ss_pred CeEEEEECCCCeEEEEEecCC------------CCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCe
Q psy8748 1846 KSCKLWDFREKKCVQTFFGHE------------ADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGF 1913 (2004)
Q Consensus 1846 GsIrIWDlrs~k~I~tl~~h~------------s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~I 1913 (2004)
...+.|+.++.....+.... .++..+.. +++.++++. |..-.+.|. .|+...... -......
T Consensus 158 -~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~Ll~~--~~~g~fv~~-~G~~~r~~~-i~W~~~p 231 (275)
T PF00780_consen 158 -GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQL-SDNEFLLCY--DNIGVFVNK-NGEPSRKST-IQWSSAP 231 (275)
T ss_pred -ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEe-CCceEEEEe--cceEEEEcC-CCCcCcccE-EEcCCch
Confidence 48888998766543332111 12333333 345555543 333334443 343332110 0111234
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccC
Q psy8748 1914 TSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGH 1951 (2004)
Q Consensus 1914 tsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gH 1951 (2004)
..+++. ..|+++.+. +.|.||++.+++.++.+...
T Consensus 232 ~~~~~~--~pyli~~~~-~~iEV~~~~~~~lvQ~i~~~ 266 (275)
T PF00780_consen 232 QSVAYS--SPYLIAFSS-NSIEVRSLETGELVQTIPLP 266 (275)
T ss_pred hEEEEE--CCEEEEECC-CEEEEEECcCCcEEEEEECC
Confidence 455553 457777655 55999999999998888743
No 346
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.29 E-value=0.03 Score=71.73 Aligned_cols=226 Identities=15% Similarity=0.134 Sum_probs=119.3
Q ss_pred cccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEE-c
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYD-L 1763 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWD-l 1763 (2004)
.+.+.........+.++|+|++++.++ ||...|+.....+.... +.-...+|.++ +.+++-...+.|.++. +
T Consensus 25 ~k~lg~~~~~p~~ls~npngr~v~V~g-~geY~iyt~~~~r~k~~-----G~g~~~vw~~~-n~yAv~~~~~~I~I~kn~ 97 (443)
T PF04053_consen 25 VKELGSCEIYPQSLSHNPNGRFVLVCG-DGEYEIYTALAWRNKAF-----GSGLSFVWSSR-NRYAVLESSSTIKIYKNF 97 (443)
T ss_dssp -EEEEE-SS--SEEEE-TTSSEEEEEE-TTEEEEEETTTTEEEEE-----EE-SEEEE-TS-SEEEEE-TTS-EEEEETT
T ss_pred eccCCCCCcCCeeEEECCCCCEEEEEc-CCEEEEEEccCCccccc-----CceeEEEEecC-ccEEEEECCCeEEEEEcC
Confidence 444555556688999999999998855 68888887433333322 23456789884 4566666688899963 3
Q ss_pred CCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEE
Q psy8748 1764 NNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGS 1843 (2004)
Q Consensus 1764 ~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS 1843 (2004)
+... .+ .+.. ...+..+.. +.++....++.|.+||+.+++.+.++. -.+|..+.|+++|.+++..+
T Consensus 98 ~~~~----~k---~i~~-~~~~~~If~---G~LL~~~~~~~i~~yDw~~~~~i~~i~---v~~vk~V~Ws~~g~~val~t 163 (443)
T PF04053_consen 98 KNEV----VK---SIKL-PFSVEKIFG---GNLLGVKSSDFICFYDWETGKLIRRID---VSAVKYVIWSDDGELVALVT 163 (443)
T ss_dssp EE-T----T---------SS-EEEEE----SSSEEEEETTEEEEE-TTT--EEEEES---S-E-EEEEE-TTSSEEEEE-
T ss_pred cccc----ce---EEcC-CcccceEEc---CcEEEEECCCCEEEEEhhHcceeeEEe---cCCCcEEEEECCCCEEEEEe
Confidence 2111 00 1110 111222222 444444455589999999999887762 22389999999999999988
Q ss_pred CCCeEEEEECCCC-----------eEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCC
Q psy8748 1844 VDKSCKLWDFREK-----------KCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSG 1912 (2004)
Q Consensus 1844 ~DGsIrIWDlrs~-----------k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ 1912 (2004)
.+ .+.|++.+.. .....+......|.+.+|..+ .|+..+.. +++- +..|........ ..+
T Consensus 164 ~~-~i~il~~~~~~~~~~~~~g~e~~f~~~~E~~~~IkSg~W~~d--~fiYtT~~-~lkY--l~~Ge~~~i~~l---d~~ 234 (443)
T PF04053_consen 164 KD-SIYILKYNLEAVAAIPEEGVEDAFELIHEISERIKSGCWVED--CFIYTTSN-HLKY--LVNGETGIIAHL---DKP 234 (443)
T ss_dssp S--SEEEEEE-HHHHHHBTTTB-GGGEEEEEEE-S--SEEEEETT--EEEEE-TT-EEEE--EETTEEEEEEE----SS-
T ss_pred CC-eEEEEEecchhcccccccCchhceEEEEEecceeEEEEEEcC--EEEEEcCC-eEEE--EEcCCcceEEEc---CCc
Confidence 55 6788775433 023333333567889999876 44444444 6666 333433222211 234
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy8748 1913 FTSCAVSSSGRYIFCGSDDNNVHVWDLL 1940 (2004)
Q Consensus 1913 ItsLafSPdG~~LaSGSsDGsIrIWDL~ 1940 (2004)
+.-+.+.++.+.++..+.|+.|..+.+.
T Consensus 235 ~yllgy~~~~~~ly~~Dr~~~v~~~~ld 262 (443)
T PF04053_consen 235 LYLLGYLPKENRLYLIDRDGNVISYELD 262 (443)
T ss_dssp -EEEEEETTTTEEEEE-TT--EEEEE--
T ss_pred eEEEEEEccCCEEEEEECCCCEEEEEEC
Confidence 5667777777788888888888877663
No 347
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.23 E-value=0.059 Score=66.08 Aligned_cols=172 Identities=16% Similarity=0.167 Sum_probs=105.2
Q ss_pred CeEEEEECCCC-----ceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCe-EEEEEe-cCCCCeEEEEEe
Q psy8748 1803 MKIVTWNLETG-----QRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKK-CVQTFF-GHEADVNSVCFH 1875 (2004)
Q Consensus 1803 GtI~IWDl~tg-----~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k-~I~tl~-~h~s~ItsIafS 1875 (2004)
|.|.++++... +..........++|++++-- ++ +++++. ++.|.+|++...+ ....-. .....+.++...
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~-~~-~lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~ 138 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF-NG-RLVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVF 138 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE-TT-EEEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEE
T ss_pred cEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh-CC-EEEEee-cCEEEEEEccCcccchhhheecceEEEEEEecc
Confidence 89999999884 22222234567889998876 33 455544 5799999998777 433322 223356666555
Q ss_pred CCCCEEEEEECCCeEEEEEccC-CceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC-------C--eee
Q psy8748 1876 PSGLAFATGSEDKTARLFDIRA-DQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLK-------T--THN 1945 (2004)
Q Consensus 1876 Pdg~~LaSgS~DGtIrIWDLrt-gk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~t-------g--e~l 1945 (2004)
++++++|.....+.++..+. +..+...........++++.+-++++.+++++.+|.+.++.... + ...
T Consensus 139 --~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~ 216 (321)
T PF03178_consen 139 --KNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLE 216 (321)
T ss_dssp --TTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEE
T ss_pred --ccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccce
Confidence 55999999888888886554 33233333333456688888886768999999999999998752 2 122
Q ss_pred EEEcc-CCCCeEEE---EEcC--CC------CEEEEEECCCeEEEE
Q psy8748 1946 GVLSG-HENRVTSI---SLSP--NG------MALVTSSWDQFVKVW 1979 (2004)
Q Consensus 1946 ~tL~g-Hs~~VtsL---aFSP--Dg------~~LaSgS~DGtIrIW 1979 (2004)
....- ....|+++ .+.| .+ ..++.++.+|.|.+.
T Consensus 217 ~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 217 RISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp EEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred eEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 22222 34567777 4444 12 247888889988743
No 348
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.17 E-value=0.16 Score=60.57 Aligned_cols=228 Identities=15% Similarity=0.204 Sum_probs=129.3
Q ss_pred cCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEe----
Q psy8748 1744 QSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEV---- 1819 (2004)
Q Consensus 1744 Pdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~i---- 1819 (2004)
..++.|+.|+.+| +.+++..... ...... ....|..+...+.-.++..-.|+.++++++..-......
T Consensus 5 ~~~~~L~vGt~~G-l~~~~~~~~~-----~~~~i~--~~~~I~ql~vl~~~~~llvLsd~~l~~~~L~~l~~~~~~~~~~ 76 (275)
T PF00780_consen 5 SWGDRLLVGTEDG-LYVYDLSDPS-----KPTRIL--KLSSITQLSVLPELNLLLVLSDGQLYVYDLDSLEPVSTSAPLA 76 (275)
T ss_pred cCCCEEEEEECCC-EEEEEecCCc-----cceeEe--ecceEEEEEEecccCEEEEEcCCccEEEEchhhcccccccccc
Confidence 4588999999888 8999883211 111111 112277777776555444445699999998754433210
Q ss_pred ---------eccccCCeEEEE--ECCCCCEEEEEECCCeEEEEECCCC-----eEEEEEecCCCCeEEEEEeCCCCEEEE
Q psy8748 1820 ---------AQAHIGDVVSIS--LSPDGQYFVTGSVDKSCKLWDFREK-----KCVQTFFGHEADVNSVCFHPSGLAFAT 1883 (2004)
Q Consensus 1820 ---------l~~h~~~ItsLa--fSPdg~~LaSGS~DGsIrIWDlrs~-----k~I~tl~~h~s~ItsIafSPdg~~LaS 1883 (2004)
.......+...+ -...+...++......|.+|..... +..+.+ .....+.+++|. ++.++.
T Consensus 77 ~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~-~lp~~~~~i~~~--~~~i~v 153 (275)
T PF00780_consen 77 FPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEI-SLPDPPSSIAFL--GNKICV 153 (275)
T ss_pred ccccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEE-EcCCCcEEEEEe--CCEEEE
Confidence 112223344444 1223334444444568888877653 344444 345788999998 557888
Q ss_pred EECCCeEEEEEccCCceeEEEcCCCCC----------CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeE--EEccC
Q psy8748 1884 GSEDKTARLFDIRADQQIATYLPPNKN----------SGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNG--VLSGH 1951 (2004)
Q Consensus 1884 gS~DGtIrIWDLrtgk~i~t~~~~~~~----------s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~--tL~gH 1951 (2004)
|..+ ...+.|+.++.....+...... .++..+... ++.+|++. |..-.+.|. .|+..+ .+. -
T Consensus 154 ~~~~-~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~Ll~~--~~~g~fv~~-~G~~~r~~~i~-W 227 (275)
T PF00780_consen 154 GTSK-GFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNEFLLCY--DNIGVFVNK-NGEPSRKSTIQ-W 227 (275)
T ss_pred EeCC-ceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeC-CceEEEEe--cceEEEEcC-CCCcCcccEEE-c
Confidence 8754 4889999877665444222211 223333333 45666653 333333343 444333 221 2
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEE
Q psy8748 1952 ENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLK 1991 (2004)
Q Consensus 1952 s~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik 1991 (2004)
...+.++++ ...+|+..+.+ .|.||++.+++..+.+.
T Consensus 228 ~~~p~~~~~--~~pyli~~~~~-~iEV~~~~~~~lvQ~i~ 264 (275)
T PF00780_consen 228 SSAPQSVAY--SSPYLIAFSSN-SIEVRSLETGELVQTIP 264 (275)
T ss_pred CCchhEEEE--ECCEEEEECCC-EEEEEECcCCcEEEEEE
Confidence 335566666 44578877765 59999999997655554
No 349
>KOG4649|consensus
Probab=97.11 E-value=0.11 Score=60.60 Aligned_cols=190 Identities=11% Similarity=0.063 Sum_probs=115.3
Q ss_pred CCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccC
Q psy8748 1746 GNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIG 1825 (2004)
Q Consensus 1746 g~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~ 1825 (2004)
..+++.|+..|.+...|..++....+ .+ -...+.+-+..-++.++.|+..|.+++.+.++|.....+.....-
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We-----~i--lg~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~v 95 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWE-----AI--LGVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETV 95 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEee-----hh--hCceeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeehhhh
Confidence 45677788888888877776542221 11 122333333345667999999999999999999776555322222
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEc
Q psy8748 1826 DVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYL 1905 (2004)
Q Consensus 1826 ~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~ 1905 (2004)
.+ .....+++..++.|+.|++.+..|.++..++...+...+...+-+..|-...++.+...|.+.--..+.+.. ..+.
T Consensus 96 k~-~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~sly~a~t~G~vlavt~~~~~~-~~~w 173 (354)
T KOG4649|consen 96 KV-RAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGSLYAAITAGAVLAVTKNPYSS-TEFW 173 (354)
T ss_pred cc-ceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCceEEEEeccceEEEEccCCCCc-ceeh
Confidence 22 234567899999999999999999999998888765555444555666333455555666665555444321 1111
Q ss_pred CCCCCCCeEE--EEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEE
Q psy8748 1906 PPNKNSGFTS--CAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVL 1948 (2004)
Q Consensus 1906 ~~~~~s~Its--LafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL 1948 (2004)
......++.. ++ -+..+..+.-||.+.-+| ..|+.+...
T Consensus 174 ~~~~~~PiF~splc---v~~sv~i~~VdG~l~~f~-~sG~qvwr~ 214 (354)
T KOG4649|consen 174 AATRFGPIFASPLC---VGSSVIITTVDGVLTSFD-ESGRQVWRP 214 (354)
T ss_pred hhhcCCccccCcee---ccceEEEEEeccEEEEEc-CCCcEEEee
Confidence 1111122211 11 144566666777777776 556655544
No 350
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=97.11 E-value=0.41 Score=58.61 Aligned_cols=274 Identities=12% Similarity=0.092 Sum_probs=130.4
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCc-eEEEe--eCC---CCceEEEEEecCCCEEEEeecCCeEEEEEcCC
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGN-KTQVI--PLR---SAWVMSVAFAQSGNFVACGGMDNMCTVYDLNN 1765 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk-~l~ti--~~H---t~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t 1765 (2004)
...+.+|+|..+..-+++| ..|.| +...+|- .-... ... .....++.|.. ...+++ +..| +.+...+.
T Consensus 16 ~~~l~dV~F~d~~~G~~VG-~~g~i--l~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~-~~g~iv-G~~g-~ll~T~Dg 89 (302)
T PF14870_consen 16 DKPLLDVAFVDPNHGWAVG-AYGTI--LKTTDGGKTWQPVSLDLDNPFDYHLNSISFDG-NEGWIV-GEPG-LLLHTTDG 89 (302)
T ss_dssp SS-EEEEEESSSS-EEEEE-TTTEE--EEESSTTSS-EE-----S-----EEEEEEEET-TEEEEE-EETT-EEEEESST
T ss_pred CCceEEEEEecCCEEEEEe-cCCEE--EEECCCCccccccccCCCccceeeEEEEEecC-CceEEE-cCCc-eEEEecCC
Confidence 3588999998555555555 45654 3333432 21111 111 22466777764 334444 4455 33333333
Q ss_pred CCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECC
Q psy8748 1766 RDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVD 1845 (2004)
Q Consensus 1766 ~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~D 1845 (2004)
+. ....+.......+....+...++.....++..|.|+.= .+.|+.-..+.....+.+..+..+++|++++++...
T Consensus 90 G~---tW~~v~l~~~lpgs~~~i~~l~~~~~~l~~~~G~iy~T-~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G 165 (302)
T PF14870_consen 90 GK---TWERVPLSSKLPGSPFGITALGDGSAELAGDRGAIYRT-TDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRG 165 (302)
T ss_dssp TS---S-EE----TT-SS-EEEEEEEETTEEEEEETT--EEEE-SSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTS
T ss_pred CC---CcEEeecCCCCCCCeeEEEEcCCCcEEEEcCCCcEEEe-CCCCCCeeEcccCCcceeEeEEECCCCcEEEEECcc
Confidence 32 22222211112223333444444555555566665442 234444444445566788999999999999888766
Q ss_pred CeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEc-cCCceeEE--EcCCCCCCCeEEEEEcCCC
Q psy8748 1846 KSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDI-RADQQIAT--YLPPNKNSGFTSCAVSSSG 1922 (2004)
Q Consensus 1846 GsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDL-rtgk~i~t--~~~~~~~s~ItsLafSPdG 1922 (2004)
....-||--...-...-......|..+.|.|++...+.+ ..|.|+.=+. .....-.. .........+..++|.+++
T Consensus 166 ~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~ 244 (302)
T PF14870_consen 166 NFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPN 244 (302)
T ss_dssp SEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS
T ss_pred cEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCC
Confidence 666788865432333333456889999999998776655 8898888872 22222111 1111233458899999988
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeEEEc---cCCCCeEEEEEcCCCCEEEEEECCCeEEEE
Q psy8748 1923 RYIFCGSDDNNVHVWDLLKTTHNGVLS---GHENRVTSISLSPNGMALVTSSWDQFVKVW 1979 (2004)
Q Consensus 1923 ~~LaSGSsDGsIrIWDL~tge~l~tL~---gHs~~VtsLaFSPDg~~LaSgS~DGtIrIW 1979 (2004)
...++|+ .|.+ +.....|+.=.... .-...+..|.|.++.+-+ ..|.||.|--|
T Consensus 245 ~~wa~gg-~G~l-~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf-~lG~~G~ll~~ 301 (302)
T PF14870_consen 245 EIWAVGG-SGTL-LVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGF-VLGQDGVLLRY 301 (302)
T ss_dssp -EEEEES-TT-E-EEESSTTSS-EE-GGGTTSSS---EEEEEETTEEE-EE-STTEEEEE
T ss_pred CEEEEeC-CccE-EEeCCCCccceECccccCCCCceEEEEEcCCCceE-EECCCcEEEEe
Confidence 8777665 4433 33444454433332 234568889997665444 45568877655
No 351
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.09 E-value=0.016 Score=77.92 Aligned_cols=136 Identities=17% Similarity=0.165 Sum_probs=99.6
Q ss_pred CCCeEEEEECCCCceEEEeeCCCCc-eEEEEEec-----CCCEEEEeecCCeEEEEEcCCCCCCCcceEE---EEEecCc
Q psy8748 1712 LDGKLIIWDTWTGNKTQVIPLRSAW-VMSVAFAQ-----SGNFVACGGMDNMCTVYDLNNRDSTGAAKVI---RELLGYE 1782 (2004)
Q Consensus 1712 ~DGtIrVWDl~Tgk~l~ti~~Ht~~-ItsLafSP-----dg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i---~sl~gh~ 1782 (2004)
....|+-.|+..|+.+..++.|... |..++-.. +....+.|-.+..+..||.+-.. .+.+ .......
T Consensus 502 ~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~----~k~v~~~~k~Y~~~ 577 (794)
T PF08553_consen 502 NPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSG----NKLVDSQSKQYSSK 577 (794)
T ss_pred CCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCC----CceeeccccccccC
Confidence 4577899999999999999887754 55554321 13345667777889999987532 1111 1122345
Q ss_pred cceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy8748 1783 GFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDF 1853 (2004)
Q Consensus 1783 ~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDl 1853 (2004)
...+|++-..++++++|+.+|.|++||- .|....+.+.+.+.+|.++..+.||+++++.+ +..+.+++.
T Consensus 578 ~~Fs~~aTt~~G~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 578 NNFSCFATTEDGYIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred CCceEEEecCCceEEEEeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 5677888889999999999999999994 44555556667789999999999999988776 567777775
No 352
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.08 E-value=0.18 Score=60.05 Aligned_cols=206 Identities=13% Similarity=0.226 Sum_probs=115.2
Q ss_pred cccccccccceeEEEEeCCCC-EEEEEeCCCeEEEEECCCCceEEEeeCCC-CceEEEEEecCCCEEEEeecCCeEEEEE
Q psy8748 1685 KKSLKGHINKVNSVHYSGDSR-HCVSGSLDGKLIIWDTWTGNKTQVIPLRS-AWVMSVAFAQSGNFVACGGMDNMCTVYD 1762 (2004)
Q Consensus 1685 i~sL~GHt~~VtsLaFSPDG~-~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht-~~ItsLafSPdg~~LaSGS~DGtIrVWD 1762 (2004)
.+.+.+-...+..++|+|+.+ ++++....+.|...+. +|+.++.++... +..-+|++..++.++++--.++.+.+++
T Consensus 14 ~~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~ 92 (248)
T PF06977_consen 14 AKPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFT 92 (248)
T ss_dssp EEE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEE
T ss_pred eeECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEE
Confidence 345666667799999999766 5556666788888885 688888876543 5578899988888877777789999999
Q ss_pred cCCCCCCCcceEEEEEe-----cCccceeeeEEeCC-CcEEEeecCCeEEEEECCC---CceeE-Ee------eccccCC
Q psy8748 1763 LNNRDSTGAAKVIRELL-----GYEGFLSSCRFIDD-TTLLTGSGDMKIVTWNLET---GQRIH-EV------AQAHIGD 1826 (2004)
Q Consensus 1763 l~t~~~~~~~k~i~sl~-----gh~~~Vssvafsdd-~~LlSgS~DGtI~IWDl~t---g~~i~-~i------l~~h~~~ 1826 (2004)
+..............+. .+...+..++|.+. +.++++-...-..+|.+.. +.... .. .......
T Consensus 93 ~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 172 (248)
T PF06977_consen 93 IDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRD 172 (248)
T ss_dssp E----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS-
T ss_pred EeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecc
Confidence 85432221111111111 23455889999864 5677777766555555543 11111 11 1123456
Q ss_pred eEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEEEecCC---------CCeEEEEEeCCCCEEEEEECCCeEEEE
Q psy8748 1827 VVSISLSPDG-QYFVTGSVDKSCKLWDFREKKCVQTFFGHE---------ADVNSVCFHPSGLAFATGSEDKTARLF 1893 (2004)
Q Consensus 1827 ItsLafSPdg-~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~---------s~ItsIafSPdg~~LaSgS~DGtIrIW 1893 (2004)
+.+++++|.. .+++.+..+..|.++| .+|+.+..+.-.. ...-+|+|.++|+..+ .++-+..++|
T Consensus 173 ~S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYI-vsEpNlfy~f 247 (248)
T PF06977_consen 173 LSGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYI-VSEPNLFYRF 247 (248)
T ss_dssp --EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEE-EETTTEEEEE
T ss_pred ccceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEE-EcCCceEEEe
Confidence 8899999964 4566666778899999 6677665553222 2467899999996554 4465555554
No 353
>KOG3617|consensus
Probab=97.08 E-value=0.012 Score=76.18 Aligned_cols=93 Identities=12% Similarity=0.139 Sum_probs=75.3
Q ss_pred cCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCE
Q psy8748 1801 GDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLA 1880 (2004)
Q Consensus 1801 ~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~ 1880 (2004)
..|.|.||- ++|+.-..+ ..+-.+++++|+|..-.++.|-.-|.+.+|...+.+.......|..+|..+.|+++|..
T Consensus 39 r~GSVtIfa-dtGEPqr~V--t~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~ 115 (1416)
T KOG3617|consen 39 RGGSVTIFA-DTGEPQRDV--TYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTV 115 (1416)
T ss_pred CCceEEEEe-cCCCCCccc--ccceehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCe
Confidence 467787774 345433222 22344678999999888999999999999999888777777789999999999999999
Q ss_pred EEEEECCCeEEEEEcc
Q psy8748 1881 FATGSEDKTARLFDIR 1896 (2004)
Q Consensus 1881 LaSgS~DGtIrIWDLr 1896 (2004)
++++..-|.|.+|...
T Consensus 116 l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 116 LMTLDNPGSVHLWRYD 131 (1416)
T ss_pred EEEcCCCceeEEEEee
Confidence 9999999999999865
No 354
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.06 E-value=0.39 Score=60.68 Aligned_cols=259 Identities=15% Similarity=0.186 Sum_probs=162.3
Q ss_pred ceeEEEEeCCCCEEEEEe-CCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCC-EEEEeecCCeEEEEEcCCCCCCCc
Q psy8748 1694 KVNSVHYSGDSRHCVSGS-LDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGN-FVACGGMDNMCTVYDLNNRDSTGA 1771 (2004)
Q Consensus 1694 ~VtsLaFSPDG~~LASGS-~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~-~LaSGS~DGtIrVWDl~t~~~~~~ 1771 (2004)
....+.+.+++..+.... ....+.+.+................-..++.++.++ .++....++.|.+.|.....
T Consensus 32 ~~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~---- 107 (381)
T COG3391 32 GPGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNT---- 107 (381)
T ss_pred CCceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccc----
Confidence 445677778885443332 222455555442221111121213445778888877 44555556889999965432
Q ss_pred ceEEEEEecCccceeeeEEeCC-CcEEEeec---CCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEE-CCC
Q psy8748 1772 AKVIRELLGYEGFLSSCRFIDD-TTLLTGSG---DMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGS-VDK 1846 (2004)
Q Consensus 1772 ~k~i~sl~gh~~~Vssvafsdd-~~LlSgS~---DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS-~DG 1846 (2004)
....... ......+.+.++ +.+.++.. ++.+.+.|..++........+. .+ ..++++|+|+.+++.. .++
T Consensus 108 --~~~~~~v-G~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~-~P-~~~a~~p~g~~vyv~~~~~~ 182 (381)
T COG3391 108 --VLGSIPV-GLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGN-TP-TGVAVDPDGNKVYVTNSDDN 182 (381)
T ss_pred --eeeEeee-ccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCC-Cc-ceEEECCCCCeEEEEecCCC
Confidence 1121111 114445555543 35555444 6899999999988887754333 23 8899999999777665 788
Q ss_pred eEEEEECCCCeEEE-E---EecCCCCeEEEEEeCCCCEEEEEECC---CeEEEEEccCCceeEEEcCCCCCCCeEEEEEc
Q psy8748 1847 SCKLWDFREKKCVQ-T---FFGHEADVNSVCFHPSGLAFATGSED---KTARLFDIRADQQIATYLPPNKNSGFTSCAVS 1919 (2004)
Q Consensus 1847 sIrIWDlrs~k~I~-t---l~~h~s~ItsIafSPdg~~LaSgS~D---GtIrIWDLrtgk~i~t~~~~~~~s~ItsLafS 1919 (2004)
.|.+.|........ . ...-......+.++++|+++++.... +.+...|..++.....-...... ....+.++
T Consensus 183 ~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~-~~~~v~~~ 261 (381)
T COG3391 183 TVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSG-APRGVAVD 261 (381)
T ss_pred eEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccC-CCCceeEC
Confidence 99999976655442 1 11223345678999999977665544 58999999888777663333333 45678999
Q ss_pred CCCCEEEEEeCC-CeEEEEECCCCeeeEEEccCCC---CeEEEEEcC
Q psy8748 1920 SSGRYIFCGSDD-NNVHVWDLLKTTHNGVLSGHEN---RVTSISLSP 1962 (2004)
Q Consensus 1920 PdG~~LaSGSsD-GsIrIWDL~tge~l~tL~gHs~---~VtsLaFSP 1962 (2004)
|+|+++.+.... +.+.+.|..+............ .+..+++.+
T Consensus 262 p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~ 308 (381)
T COG3391 262 PAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISP 308 (381)
T ss_pred CCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceecccee
Confidence 999999988554 8899999988877776543322 344555544
No 355
>KOG1008|consensus
Probab=97.04 E-value=0.00044 Score=87.27 Aligned_cols=244 Identities=18% Similarity=0.229 Sum_probs=143.1
Q ss_pred ccceeEEEEeCCC--CEEEEEeCCCeEEEEECCCCce--EEEeeCCCCceEEEEEec-CCCEEEEee----cCCeEEEEE
Q psy8748 1692 INKVNSVHYSGDS--RHCVSGSLDGKLIIWDTWTGNK--TQVIPLRSAWVMSVAFAQ-SGNFVACGG----MDNMCTVYD 1762 (2004)
Q Consensus 1692 t~~VtsLaFSPDG--~~LASGS~DGtIrVWDl~Tgk~--l~ti~~Ht~~ItsLafSP-dg~~LaSGS----~DGtIrVWD 1762 (2004)
+..+.|+++.-+. ..++.|..+|.|.+-....... ....+++....++++|++ |.+.|++|- .|..+.+||
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd 135 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD 135 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence 3467788876543 3678898999999987765422 334567888899999998 566777763 356799999
Q ss_pred cCCCCCCCcceEEEEEecCccceeeeEEeCC-CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC-CCCEEE
Q psy8748 1763 LNNRDSTGAAKVIRELLGYEGFLSSCRFIDD-TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP-DGQYFV 1840 (2004)
Q Consensus 1763 l~t~~~~~~~k~i~sl~gh~~~Vssvafsdd-~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP-dg~~La 1840 (2004)
+.++-......... ..+......+++|..+ ..+++|.....+.++|++........ -....+..+.++| .+++++
T Consensus 136 i~s~ltvPke~~~f-s~~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~s--vnTk~vqG~tVdp~~~nY~c 212 (783)
T KOG1008|consen 136 INSLLTVPKESPLF-SSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSS--VNTKYVQGITVDPFSPNYFC 212 (783)
T ss_pred cccccCCCcccccc-ccccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhh--hhhhhcccceecCCCCCcee
Confidence 98752111111111 1112233335666644 44777778889999999743221111 1233466778888 777877
Q ss_pred EEECCCeEEEEE-CCCCe-EEEEEec----CCCCeEEEEEeCCCC-EEEEEE-CCCeEEEEEccCCc--------ee---
Q psy8748 1841 TGSVDKSCKLWD-FREKK-CVQTFFG----HEADVNSVCFHPSGL-AFATGS-EDKTARLFDIRADQ--------QI--- 1901 (2004)
Q Consensus 1841 SGS~DGsIrIWD-lrs~k-~I~tl~~----h~s~ItsIafSPdg~-~LaSgS-~DGtIrIWDLrtgk--------~i--- 1901 (2004)
+.. ||.|.+|| .++-+ ++..+.. ....+..++|+|... .+++.. ..++|+.+|+..-. ..
T Consensus 213 s~~-dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~~v~t~~s~nn~~~~~~ 291 (783)
T KOG1008|consen 213 SNS-DGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDICVVGTEGSANNSVFVNY 291 (783)
T ss_pred ccc-cCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEecccccCCcccccccceeee
Confidence 665 99999999 33222 2222211 123488999999432 344444 45789999985311 01
Q ss_pred -EE--EcCCCCCCCeEEEEEcCCC--CEEEEEeCCCeEEEEEC
Q psy8748 1902 -AT--YLPPNKNSGFTSCAVSSSG--RYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1902 -~t--~~~~~~~s~ItsLafSPdG--~~LaSGSsDGsIrIWDL 1939 (2004)
.. +........|.+..|++.. ...+.+-.+-++.-+++
T Consensus 292 ~s~~~~q~~~~~s~I~~f~wH~~s~~er~il~~~nl~~~Df~V 334 (783)
T KOG1008|consen 292 ESKYPVQPNSQCSGIDFFTWHTASPTERQILGVINLQPKDFSV 334 (783)
T ss_pred cccccccccccccceeecCcCcCCccceeEEeeccCChhhccc
Confidence 11 1112223567788888744 33444444444444443
No 356
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=96.97 E-value=0.19 Score=59.92 Aligned_cols=201 Identities=15% Similarity=0.205 Sum_probs=116.3
Q ss_pred EEEecCccceeeeEEeCC-Cc-EEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy8748 1776 RELLGYEGFLSSCRFIDD-TT-LLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDF 1853 (2004)
Q Consensus 1776 ~sl~gh~~~Vssvafsdd-~~-LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDl 1853 (2004)
+.+.+....++.++|.++ +. +++....+.|..++. +|+.+.++.....+..-.+++..++.++++.-.++.+.++++
T Consensus 15 ~~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~ 93 (248)
T PF06977_consen 15 KPLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTI 93 (248)
T ss_dssp EE-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE
T ss_pred eECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEE
Confidence 345556667999999964 43 555667788988886 477777765555677899999877777766656899999988
Q ss_pred CCCe------EEEEEe-----cCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccC---CceeEEEc------CCCCCCCe
Q psy8748 1854 REKK------CVQTFF-----GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRA---DQQIATYL------PPNKNSGF 1913 (2004)
Q Consensus 1854 rs~k------~I~tl~-----~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrt---gk~i~t~~------~~~~~s~I 1913 (2004)
.... ....+. .++..+-.++|++.++.|+++-...-..+|.++. ........ .......+
T Consensus 94 ~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 173 (248)
T PF06977_consen 94 DDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDL 173 (248)
T ss_dssp ----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS--
T ss_pred eccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceeccc
Confidence 4321 112221 2445689999999888888887776667777653 21111110 11223457
Q ss_pred EEEEEcCC-CCEEEEEeCCCeEEEEECCCCeeeEEEccCC---------CCeEEEEEcCCCCEEEEEECCCeEEEE
Q psy8748 1914 TSCAVSSS-GRYIFCGSDDNNVHVWDLLKTTHNGVLSGHE---------NRVTSISLSPNGMALVTSSWDQFVKVW 1979 (2004)
Q Consensus 1914 tsLafSPd-G~~LaSGSsDGsIrIWDL~tge~l~tL~gHs---------~~VtsLaFSPDg~~LaSgS~DGtIrIW 1979 (2004)
..++++|. |++++..+.+..|..+| .+|+.+..+.-.. ..--+|+|.++|++ +..++-+..++|
T Consensus 174 S~l~~~p~t~~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~L-YIvsEpNlfy~f 247 (248)
T PF06977_consen 174 SGLSYDPRTGHLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNL-YIVSEPNLFYRF 247 (248)
T ss_dssp -EEEEETTTTEEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--E-EEEETTTEEEEE
T ss_pred cceEEcCCCCeEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCE-EEEcCCceEEEe
Confidence 88999995 55666677788899999 6788776653222 24789999999864 444566655554
No 357
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=96.96 E-value=0.043 Score=70.29 Aligned_cols=93 Identities=20% Similarity=0.288 Sum_probs=71.5
Q ss_pred EEEECCCCce--eEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEE
Q psy8748 1806 VTWNLETGQR--IHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFAT 1883 (2004)
Q Consensus 1806 ~IWDl~tg~~--i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaS 1883 (2004)
++|+...++. +....-.....+.+++++|+...++.|+.||.|.+||...+... .....-.++.++|+|+|..+++
T Consensus 239 ciYE~~r~klqrvsvtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~--~~ka~~~P~~iaWHp~gai~~V 316 (545)
T PF11768_consen 239 CIYECSRNKLQRVSVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL--LAKAEFIPTLIAWHPDGAIFVV 316 (545)
T ss_pred EEEEeecCceeEEEEEEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee--eeeecccceEEEEcCCCcEEEE
Confidence 4555554432 21222356778999999999999999999999999998766432 3344566789999999999999
Q ss_pred EECCCeEEEEEccCCce
Q psy8748 1884 GSEDKTARLFDIRADQQ 1900 (2004)
Q Consensus 1884 gS~DGtIrIWDLrtgk~ 1900 (2004)
|+..|.+.+||+.-...
T Consensus 317 ~s~qGelQ~FD~ALspi 333 (545)
T PF11768_consen 317 GSEQGELQCFDMALSPI 333 (545)
T ss_pred EcCCceEEEEEeecCcc
Confidence 99999999999865433
No 358
>KOG1008|consensus
Probab=96.96 E-value=0.00025 Score=89.38 Aligned_cols=183 Identities=19% Similarity=0.304 Sum_probs=123.7
Q ss_pred cEEEeecCCeEEEEECCCCcee-EEeeccccCCeEEEEECC-CCCEEEEEE----CCCeEEEEECCCC--eEE--EEEec
Q psy8748 1795 TLLTGSGDMKIVTWNLETGQRI-HEVAQAHIGDVVSISLSP-DGQYFVTGS----VDKSCKLWDFREK--KCV--QTFFG 1864 (2004)
Q Consensus 1795 ~LlSgS~DGtI~IWDl~tg~~i-~~il~~h~~~ItsLafSP-dg~~LaSGS----~DGsIrIWDlrs~--k~I--~tl~~ 1864 (2004)
.+.+|..+|.|.+-..+...-- ..+..++....++++|++ |.+.|++|- .|..+.|||+.++ .+. ..+.+
T Consensus 72 IlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~ 151 (783)
T KOG1008|consen 72 ILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSS 151 (783)
T ss_pred hhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCcccccccc
Confidence 4778888999999887654433 455567888899999998 566777764 3557999999876 221 11222
Q ss_pred -CCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCce-eEEEcCCCCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEE-CC
Q psy8748 1865 -HEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQ-IATYLPPNKNSGFTSCAVSS-SGRYIFCGSDDNNVHVWD-LL 1940 (2004)
Q Consensus 1865 -h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~-i~t~~~~~~~s~ItsLafSP-dG~~LaSGSsDGsIrIWD-L~ 1940 (2004)
......+++|..+.+.+.+|.....+.++|++.... ...+. ...+..+.++| .++|+++-. ||.|.+|| .+
T Consensus 152 ~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRqs~~~~~svn----Tk~vqG~tVdp~~~nY~cs~~-dg~iAiwD~~r 226 (783)
T KOG1008|consen 152 STLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQSLDSVSSVN----TKYVQGITVDPFSPNYFCSNS-DGDIAIWDTYR 226 (783)
T ss_pred ccccCccccccccCcchhhcccccchhhhhhhhhhhhhhhhhh----hhhcccceecCCCCCceeccc-cCceeeccchh
Confidence 334566899998889999999999999999983322 22221 12356677888 778887764 99999999 33
Q ss_pred CCee-eEEEccCC----CCeEEEEEcCCCC-EEEEEEC-CCeEEEEECC
Q psy8748 1941 KTTH-NGVLSGHE----NRVTSISLSPNGM-ALVTSSW-DQFVKVWQES 1982 (2004)
Q Consensus 1941 tge~-l~tL~gHs----~~VtsLaFSPDg~-~LaSgS~-DGtIrIWdls 1982 (2004)
+-+. +..+.... ..+..++|+|... .+++... .++|+.+++.
T Consensus 227 nienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 227 NIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred hhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 3322 22222112 2489999999543 3555555 4789999875
No 359
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=96.93 E-value=0.26 Score=62.96 Aligned_cols=177 Identities=13% Similarity=0.106 Sum_probs=100.7
Q ss_pred cceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEee-ccccCCe-----EEEEECCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1783 GFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVA-QAHIGDV-----VSISLSPDGQYFVTGSVDKSCKLWDFREK 1856 (2004)
Q Consensus 1783 ~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il-~~h~~~I-----tsLafSPdg~~LaSGS~DGsIrIWDlrs~ 1856 (2004)
+.+.++.|..+..+++...||.+++||+.... ...+. ......| ....+..+| +++-+.++.+.+..-...
T Consensus 81 ~~iv~~~wt~~e~LvvV~~dG~v~vy~~~G~~-~fsl~~~i~~~~v~e~~i~~~~~~~~G--ivvLt~~~~~~~v~n~~~ 157 (410)
T PF04841_consen 81 GRIVGMGWTDDEELVVVQSDGTVRVYDLFGEF-QFSLGEEIEEEKVLECRIFAIWFYKNG--IVVLTGNNRFYVVNNIDE 157 (410)
T ss_pred CCEEEEEECCCCeEEEEEcCCEEEEEeCCCce-eechhhhccccCcccccccccccCCCC--EEEECCCCeEEEEeCccc
Confidence 78889999999999999999999999986333 11110 0011122 222333344 333344555555432221
Q ss_pred e-EEEEE---ecCC-----C-CeEE-EEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEE
Q psy8748 1857 K-CVQTF---FGHE-----A-DVNS-VCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYI 1925 (2004)
Q Consensus 1857 k-~I~tl---~~h~-----s-~Its-IafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~L 1925 (2004)
. ..+.+ .... . .... ..++.+....+....++.+.+.+-...+. . ...+++..+++||+|+++
T Consensus 158 ~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i---~~~~~i~~iavSpng~~i 231 (410)
T PF04841_consen 158 PVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---I---DSDGPIIKIAVSPNGKFI 231 (410)
T ss_pred cchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---c---cCCCCeEEEEECCCCCEE
Confidence 1 11111 1100 0 0001 23444555555555566666554332211 1 123579999999999999
Q ss_pred EEEeCCCeEEEEECCCCeeeEEEccC-CCCeEEEEEcCCCCEEE
Q psy8748 1926 FCGSDDNNVHVWDLLKTTHNGVLSGH-ENRVTSISLSPNGMALV 1968 (2004)
Q Consensus 1926 aSGSsDGsIrIWDL~tge~l~tL~gH-s~~VtsLaFSPDg~~La 1968 (2004)
|.-..+|.+.+.+..-.+....+... ......+.|+.++..++
T Consensus 232 Al~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~dav~l 275 (410)
T PF04841_consen 232 ALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGNDAVVL 275 (410)
T ss_pred EEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCCcEEE
Confidence 99999999999987666666555433 45677888887654433
No 360
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=96.89 E-value=0.57 Score=59.43 Aligned_cols=244 Identities=12% Similarity=0.087 Sum_probs=125.8
Q ss_pred ceeEEEEeCCCCEEEEE-eCC----CeEEEEECCCCceEEEe-eCCCCceEEEEEecCCCEEEEeecCC-----------
Q psy8748 1694 KVNSVHYSGDSRHCVSG-SLD----GKLIIWDTWTGNKTQVI-PLRSAWVMSVAFAQSGNFVACGGMDN----------- 1756 (2004)
Q Consensus 1694 ~VtsLaFSPDG~~LASG-S~D----GtIrVWDl~Tgk~l~ti-~~Ht~~ItsLafSPdg~~LaSGS~DG----------- 1756 (2004)
.+...++||||+++|.+ +.. ..++++|+.+|+.+... ... ....+.|.++++.|+....+.
T Consensus 125 ~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~ 202 (414)
T PF02897_consen 125 SLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPR 202 (414)
T ss_dssp EEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCE
T ss_pred EeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCc
Confidence 44467899999988854 333 35999999999776532 221 123499999988776654332
Q ss_pred eEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCC-cEEEe-e--cC-CeEEEEECCCC----ceeEEeeccccCCe
Q psy8748 1757 MCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTG-S--GD-MKIVTWNLETG----QRIHEVAQAHIGDV 1827 (2004)
Q Consensus 1757 tIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~-~LlSg-S--~D-GtI~IWDl~tg----~~i~~il~~h~~~I 1827 (2004)
.|+.|.+.+.. ..-..+............+..+.++ .++.. . .+ ..+++.|...+ .....+.....+..
T Consensus 203 ~v~~~~~gt~~--~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~ 280 (414)
T PF02897_consen 203 QVYRHKLGTPQ--SEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVE 280 (414)
T ss_dssp EEEEEETTS-G--GG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-E
T ss_pred EEEEEECCCCh--HhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceE
Confidence 36677765432 1111222222222213445555444 43332 2 23 46888888875 22223322233333
Q ss_pred EEEEECCCCCEEEEEE---CCCeEEEEECCCCeE---EEEEecCCCC--eEEEEEeCCCCEEE-EEECCC--eEEEEEcc
Q psy8748 1828 VSISLSPDGQYFVTGS---VDKSCKLWDFREKKC---VQTFFGHEAD--VNSVCFHPSGLAFA-TGSEDK--TARLFDIR 1896 (2004)
Q Consensus 1828 tsLafSPdg~~LaSGS---~DGsIrIWDlrs~k~---I~tl~~h~s~--ItsIafSPdg~~La-SgS~DG--tIrIWDLr 1896 (2004)
..+... .+.+++... ..+.|...++..... ...+..+... +..+.. .+.+|+ ....++ .|+++++.
T Consensus 281 ~~v~~~-~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl~~~~~~~~~l~v~~~~ 357 (414)
T PF02897_consen 281 YYVDHH-GDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSL--FKDYLVLSYRENGSSRLRVYDLD 357 (414)
T ss_dssp EEEEEE-TTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEE--ETTEEEEEEEETTEEEEEEEETT
T ss_pred EEEEcc-CCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEE--ECCEEEEEEEECCccEEEEEECC
Confidence 333333 333433332 235677788876652 3355555553 445444 344544 444444 48889988
Q ss_pred CCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEe--C--CCeEEEEECCCCeee
Q psy8748 1897 ADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGS--D--DNNVHVWDLLKTTHN 1945 (2004)
Q Consensus 1897 tgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGS--s--DGsIrIWDL~tge~l 1945 (2004)
.+........+. .+.+..+...++++.+.... . -++++-||+.+++..
T Consensus 358 ~~~~~~~~~~p~-~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~~ 409 (414)
T PF02897_consen 358 DGKESREIPLPE-AGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGELT 409 (414)
T ss_dssp -TEEEEEEESSS-SSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCEE
T ss_pred CCcEEeeecCCc-ceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCEE
Confidence 344444443333 24455665556665544322 2 257888898887654
No 361
>KOG3621|consensus
Probab=96.78 E-value=0.0048 Score=79.36 Aligned_cols=115 Identities=21% Similarity=0.230 Sum_probs=90.4
Q ss_pred CeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeE-
Q psy8748 1868 DVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNG- 1946 (2004)
Q Consensus 1868 ~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~- 1946 (2004)
.|.--+++..+++++.|+.-|.+++|+-..+.. ..+......+.+..+.++++..++|+|+..|.|.++-+..+.+..
T Consensus 35 ~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~-~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~ 113 (726)
T KOG3621|consen 35 RVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEM-RKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDL 113 (726)
T ss_pred eEEEEEeecCCceEEEecccceEEEEecCchhh-hcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcc
Confidence 344455667888999999999999999775544 333333345667788899999999999999999999886633221
Q ss_pred ----EE-ccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCC
Q psy8748 1947 ----VL-SGHENRVTSISLSPNGMALVTSSWDQFVKVWQESN 1983 (2004)
Q Consensus 1947 ----tL-~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlst 1983 (2004)
.. +.|...|++++|++++..+++|...|+|..-.++.
T Consensus 114 ~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 114 DYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred eeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 11 24788999999999999999999999999988887
No 362
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=96.73 E-value=1.5 Score=60.22 Aligned_cols=200 Identities=15% Similarity=0.112 Sum_probs=118.2
Q ss_pred CCEEEEEeCCCeEEEEECCCCceEEEeeCCCCc--------eEEEEEec----------------CCCEEEEeecCCeEE
Q psy8748 1704 SRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAW--------VMSVAFAQ----------------SGNFVACGGMDNMCT 1759 (2004)
Q Consensus 1704 G~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~--------ItsLafSP----------------dg~~LaSGS~DGtIr 1759 (2004)
+..++.++.++.|.-.|..+|+.+..+...... .+.+.+.. .+..++.++.|+.+.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 456777777888999999999988877543211 12233321 345788888999999
Q ss_pred EEEcCCCCCCCcceE-----EEEEec-Cc-c--ceeeeEEeCCCcEEEeec----------CCeEEEEECCCCceeEEee
Q psy8748 1760 VYDLNNRDSTGAAKV-----IRELLG-YE-G--FLSSCRFIDDTTLLTGSG----------DMKIVTWNLETGQRIHEVA 1820 (2004)
Q Consensus 1760 VWDl~t~~~~~~~k~-----i~sl~g-h~-~--~Vssvafsdd~~LlSgS~----------DGtI~IWDl~tg~~i~~il 1820 (2004)
..|.++++....+.. ...-.+ .. . .+++.-..-++.+++|+. +|.|+-+|.++|+......
T Consensus 274 ALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~~ 353 (764)
T TIGR03074 274 ALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAWD 353 (764)
T ss_pred EEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEEe
Confidence 999887653321110 000000 00 0 011111123456666643 6889999999999886653
Q ss_pred cccc--------C--------Ce-EEEEECCCCCEEEEEEC------------------CCeEEEEECCCCeEEEEEecC
Q psy8748 1821 QAHI--------G--------DV-VSISLSPDGQYFVTGSV------------------DKSCKLWDFREKKCVQTFFGH 1865 (2004)
Q Consensus 1821 ~~h~--------~--------~I-tsLafSPdg~~LaSGS~------------------DGsIrIWDlrs~k~I~tl~~h 1865 (2004)
.+.. + .+ ..++++++...++.+.. .+.|.-.|.++++....++..
T Consensus 354 ~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q~~ 433 (764)
T TIGR03074 354 PGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQTV 433 (764)
T ss_pred cCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEeccc
Confidence 2210 0 11 23456665555554321 245777788888887777542
Q ss_pred CCCeEE---------EEEeC-CCC---EEEEEECCCeEEEEEccCCceeEE
Q psy8748 1866 EADVNS---------VCFHP-SGL---AFATGSEDKTARLFDIRADQQIAT 1903 (2004)
Q Consensus 1866 ~s~Its---------IafSP-dg~---~LaSgS~DGtIrIWDLrtgk~i~t 1903 (2004)
...+.. +.+.. +|+ .++.++.+|.+.++|.++|+.+..
T Consensus 434 ~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~ 484 (764)
T TIGR03074 434 HHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVP 484 (764)
T ss_pred CCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEee
Confidence 222221 22322 553 688999999999999999887654
No 363
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=96.65 E-value=0.29 Score=60.06 Aligned_cols=220 Identities=15% Similarity=0.102 Sum_probs=125.9
Q ss_pred EEecCCC-EEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEe
Q psy8748 1741 AFAQSGN-FVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEV 1819 (2004)
Q Consensus 1741 afSPdg~-~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~i 1819 (2004)
.|.++.. .+.+--..+.|.-|+..++. ...+. ..+.+.+....+....+.++..| +.+++.+++......
T Consensus 31 ~w~~~~~~L~w~DI~~~~i~r~~~~~g~-------~~~~~-~p~~~~~~~~~d~~g~Lv~~~~g-~~~~~~~~~~~~t~~ 101 (307)
T COG3386 31 VWDPDRGALLWVDILGGRIHRLDPETGK-------KRVFP-SPGGFSSGALIDAGGRLIACEHG-VRLLDPDTGGKITLL 101 (307)
T ss_pred cCcCCCCEEEEEeCCCCeEEEecCCcCc-------eEEEE-CCCCcccceeecCCCeEEEEccc-cEEEeccCCceeEEe
Confidence 4556555 33444455667777665331 11111 22223344444433333333333 455666555442222
Q ss_pred ec----cccCCeEEEEECCCCCEEEEEEC-----------CCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEE
Q psy8748 1820 AQ----AHIGDVVSISLSPDGQYFVTGSV-----------DKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATG 1884 (2004)
Q Consensus 1820 l~----~h~~~ItsLafSPdg~~LaSGS~-----------DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSg 1884 (2004)
.. ..........+.|+|.+.+.... -|.++.+|. .+..++.+..+-..-++++|+||++.++.+
T Consensus 102 ~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~~l~~~~~~~~NGla~SpDg~tly~a 180 (307)
T COG3386 102 AEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVVRLLDDDLTIPNGLAFSPDGKTLYVA 180 (307)
T ss_pred ccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEEEeecCcEEecCceEECCCCCEEEEE
Confidence 11 11234567888888875554333 133444443 455556565555667899999999887776
Q ss_pred EC-CCeEEEEEccC--C---ceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCC-eEEEEECCCCeeeEEEccCCCCeEE
Q psy8748 1885 SE-DKTARLFDIRA--D---QQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDN-NVHVWDLLKTTHNGVLSGHENRVTS 1957 (2004)
Q Consensus 1885 S~-DGtIrIWDLrt--g---k~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDG-sIrIWDL~tge~l~tL~gHs~~Vts 1957 (2004)
.. .+.|.-|++.. + ............+..-.++...+|++.+++..+| .|.+|+.. |+.+..+......+++
T Consensus 181 DT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~ 259 (307)
T COG3386 181 DTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTN 259 (307)
T ss_pred eCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCcc
Confidence 65 47788887752 1 1111111122234455678888999886655554 89999987 9999999887788999
Q ss_pred EEEc-CCCCEEEEEE
Q psy8748 1958 ISLS-PNGMALVTSS 1971 (2004)
Q Consensus 1958 LaFS-PDg~~LaSgS 1971 (2004)
++|- ++.+.|+..+
T Consensus 260 ~~FgG~~~~~L~iTs 274 (307)
T COG3386 260 PAFGGPDLNTLYITS 274 (307)
T ss_pred ceEeCCCcCEEEEEe
Confidence 9995 4445444443
No 364
>KOG1897|consensus
Probab=96.63 E-value=0.89 Score=61.39 Aligned_cols=286 Identities=12% Similarity=0.128 Sum_probs=161.6
Q ss_pred ceeEEEEeCCCCEEEEEeCCCeEEEE--ECCCCceEEEe--eCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCC
Q psy8748 1694 KVNSVHYSGDSRHCVSGSLDGKLIIW--DTWTGNKTQVI--PLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDST 1769 (2004)
Q Consensus 1694 ~VtsLaFSPDG~~LASGS~DGtIrVW--Dl~Tgk~l~ti--~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~ 1769 (2004)
.|--..|-.|..+|.++..||.+.-+ |..+|..-..- .....++.=-.|+..++.-+.+..|.-..+|..+.
T Consensus 585 SIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~---- 660 (1096)
T KOG1897|consen 585 SILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNG---- 660 (1096)
T ss_pred heeeEEeeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecCC----
Confidence 34455555678899999999998766 55555433222 23455666667766555444444455555665432
Q ss_pred CcceEEEEEecCccceeeeEEeCCCc--EEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECC--
Q psy8748 1770 GAAKVIRELLGYEGFLSSCRFIDDTT--LLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVD-- 1845 (2004)
Q Consensus 1770 ~~~k~i~sl~gh~~~Vssvafsdd~~--LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~D-- 1845 (2004)
+.......-...-..+.|.++.. .++....+.+.+.-++.-+.++...-.-......+++.+....+.+.+..
T Consensus 661 ---kLv~spls~kev~~~c~f~s~a~~d~l~~~~~~~l~i~tid~iqkl~irtvpl~~~prrI~~q~~sl~~~v~s~r~e 737 (1096)
T KOG1897|consen 661 ---KLVYSPLSLKEVNHMCPFNSDAYPDSLASANGGALTIGTIDEIQKLHIRTVPLGESPRRICYQESSLTFGVLSNRIE 737 (1096)
T ss_pred ---cEEEeccchHHhhhhcccccccCCceEEEecCCceEEEEecchhhcceeeecCCCChhheEecccceEEEEEecccc
Confidence 11111111111122233333222 33444455666666554333221112334456677777644444444321
Q ss_pred ------------CeEEEEECCCCeEEEEEec-CC---CCeEEEEEeCC-CCEEEEEEC----------CCeEEEEEccCC
Q psy8748 1846 ------------KSCKLWDFREKKCVQTFFG-HE---ADVNSVCFHPS-GLAFATGSE----------DKTARLFDIRAD 1898 (2004)
Q Consensus 1846 ------------GsIrIWDlrs~k~I~tl~~-h~---s~ItsIafSPd-g~~LaSgS~----------DGtIrIWDLrtg 1898 (2004)
..++++|-++.+.+....- .. ..|.++.|..| +.++++|.. .|.|.+|.+..+
T Consensus 738 ~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~GRIivfe~~e~ 817 (1096)
T KOG1897|consen 738 SSAEYYGEEYEVSFLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVNGRIIVFEFEEL 817 (1096)
T ss_pred cchhhcCCcceEEEEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCcccceEEEEEEecC
Confidence 1366777666554433221 11 23455568777 667777763 578888888774
Q ss_pred ceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEE
Q psy8748 1899 QQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKV 1978 (2004)
Q Consensus 1899 k~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrI 1978 (2004)
+.+.........+.+.++..- +|+++|. -+..|++|+..+.+.++.-..|..++..+...-.|..++.|.--+.+.+
T Consensus 818 ~~L~~v~e~~v~Gav~aL~~f-ngkllA~--In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitl 894 (1096)
T KOG1897|consen 818 NSLELVAETVVKGAVYALVEF-NGKLLAG--INQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITL 894 (1096)
T ss_pred Cceeeeeeeeeccceeehhhh-CCeEEEe--cCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEE
Confidence 444443222223334443321 5666664 4668999999888788777788999999999999999999988777666
Q ss_pred E--ECCCCeEEEE
Q psy8748 1979 W--QESNTIVWKV 1989 (2004)
Q Consensus 1979 W--dlstg~l~k~ 1989 (2004)
- +-..|...+.
T Consensus 895 l~y~~~eg~f~ev 907 (1096)
T KOG1897|consen 895 LQYKGDEGNFEEV 907 (1096)
T ss_pred EEEeccCCceEEe
Confidence 4 4444434333
No 365
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.60 E-value=0.1 Score=70.38 Aligned_cols=136 Identities=16% Similarity=0.262 Sum_probs=95.5
Q ss_pred CCCeEEEEECCCCeEEEEEecCCCC-eEEEEEeC-----CCCEEEEEECCCeEEEEEccCCc--eeEE-EcCCCCCCCeE
Q psy8748 1844 VDKSCKLWDFREKKCVQTFFGHEAD-VNSVCFHP-----SGLAFATGSEDKTARLFDIRADQ--QIAT-YLPPNKNSGFT 1914 (2004)
Q Consensus 1844 ~DGsIrIWDlrs~k~I~tl~~h~s~-ItsIafSP-----dg~~LaSgS~DGtIrIWDLrtgk--~i~t-~~~~~~~s~It 1914 (2004)
....++-.|+..|+.+..+..+... |..++-.. ++..-+.|-.+..+..||.|-.. .+.. ...-......+
T Consensus 502 ~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs 581 (794)
T PF08553_consen 502 NPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFS 581 (794)
T ss_pred CCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCce
Confidence 4578999999999999999887654 55543221 12345667778899999998643 2211 11112334577
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Q psy8748 1915 SCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQE 1981 (2004)
Q Consensus 1915 sLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdl 1981 (2004)
|++-+.+| +||+|+.+|.||+||-........+.+-..+|.+|..+.||+++++.+ +..+.+++.
T Consensus 582 ~~aTt~~G-~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 582 CFATTEDG-YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred EEEecCCc-eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 77777665 689999999999999533333334567789999999999999988777 456777775
No 366
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.37 E-value=1.6 Score=53.75 Aligned_cols=247 Identities=12% Similarity=0.066 Sum_probs=115.3
Q ss_pred CCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCC
Q psy8748 1734 SAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETG 1813 (2004)
Q Consensus 1734 t~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg 1813 (2004)
...+.+|.|..+..-+++|. .|. ++....+................-....+.|.++..++ ++..|. .+.-.+.|
T Consensus 16 ~~~l~dV~F~d~~~G~~VG~-~g~--il~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~~g~i-vG~~g~-ll~T~DgG 90 (302)
T PF14870_consen 16 DKPLLDVAFVDPNHGWAVGA-YGT--ILKTTDGGKTWQPVSLDLDNPFDYHLNSISFDGNEGWI-VGEPGL-LLHTTDGG 90 (302)
T ss_dssp SS-EEEEEESSSS-EEEEET-TTE--EEEESSTTSS-EE-----S-----EEEEEEEETTEEEE-EEETTE-EEEESSTT
T ss_pred CCceEEEEEecCCEEEEEec-CCE--EEEECCCCccccccccCCCccceeeEEEEEecCCceEE-EcCCce-EEEecCCC
Confidence 45789999985566666654 453 34444332221111111111112345567776554444 444553 33333444
Q ss_pred ceeEEee--ccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeE-EEEEecCCCCeEEEEEeCCCCEEEEEECCCeE
Q psy8748 1814 QRIHEVA--QAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKC-VQTFFGHEADVNSVCFHPSGLAFATGSEDKTA 1890 (2004)
Q Consensus 1814 ~~i~~il--~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~-I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtI 1890 (2004)
+.-..+. ..-.+....+....++ ....++..|.|+.=. +.++. ........+.+..+..+++|.+++++......
T Consensus 91 ~tW~~v~l~~~lpgs~~~i~~l~~~-~~~l~~~~G~iy~T~-DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~ 168 (302)
T PF14870_consen 91 KTWERVPLSSKLPGSPFGITALGDG-SAELAGDRGAIYRTT-DGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRGNFY 168 (302)
T ss_dssp SS-EE----TT-SS-EEEEEEEETT-EEEEEETT--EEEES-STTSSEEEEE-S----EEEEEE-TTS-EEEEETTSSEE
T ss_pred CCcEEeecCCCCCCCeeEEEEcCCC-cEEEEcCCCcEEEeC-CCCCCeeEcccCCcceeEeEEECCCCcEEEEECcccEE
Confidence 4333321 1122333444444344 333344555544322 22221 22233455778889999999999888766556
Q ss_pred EEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC-CCCeeeEE----EccCCCCeEEEEEcCCCC
Q psy8748 1891 RLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL-LKTTHNGV----LSGHENRVTSISLSPNGM 1965 (2004)
Q Consensus 1891 rIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL-~tge~l~t----L~gHs~~VtsLaFSPDg~ 1965 (2004)
.-||--...-.... ......|..+.|.|++...+++ ..|.|++=+. ...+.-.. .....-.+.+++|.+++.
T Consensus 169 ~s~~~G~~~w~~~~--r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~ 245 (302)
T PF14870_consen 169 SSWDPGQTTWQPHN--RNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNE 245 (302)
T ss_dssp EEE-TT-SS-EEEE----SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEESSSS-
T ss_pred EEecCCCccceEEc--cCccceehhceecCCCCEEEEe-CCcEEEEccCCCCccccccccCCcccCceeeEEEEecCCCC
Confidence 67775322111111 1234679999999998877755 8888988872 22222111 111233489999999988
Q ss_pred EEEEEECCCeEEEEECCCCeEEEEEEe
Q psy8748 1966 ALVTSSWDQFVKVWQESNTIVWKVLKV 1992 (2004)
Q Consensus 1966 ~LaSgS~DGtIrIWdlstg~l~k~Ik~ 1992 (2004)
..++|+ .|. -+...+.|+.|+..+.
T Consensus 246 ~wa~gg-~G~-l~~S~DgGktW~~~~~ 270 (302)
T PF14870_consen 246 IWAVGG-SGT-LLVSTDGGKTWQKDRV 270 (302)
T ss_dssp EEEEES-TT--EEEESSTTSS-EE-GG
T ss_pred EEEEeC-Ccc-EEEeCCCCccceECcc
Confidence 777666 453 4667888888877653
No 367
>PRK13684 Ycf48-like protein; Provisional
Probab=96.35 E-value=4.2 Score=50.70 Aligned_cols=275 Identities=13% Similarity=0.095 Sum_probs=138.8
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCC-ceEEEee----CCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCC
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTG-NKTQVIP----LRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNR 1766 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tg-k~l~ti~----~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~ 1766 (2004)
...+.+|+|..+.+-+++|. +|.| |...++ +.-.... .....+.++.|..+ ..+++ +..|. +|...++
T Consensus 45 ~~~l~~v~F~d~~~g~avG~-~G~i--l~T~DgG~tW~~~~~~~~~~~~~l~~v~~~~~-~~~~~-G~~g~--i~~S~Dg 117 (334)
T PRK13684 45 EANLLDIAFTDPNHGWLVGS-NRTL--LETNDGGETWEERSLDLPEENFRLISISFKGD-EGWIV-GQPSL--LLHTTDG 117 (334)
T ss_pred CCceEEEEEeCCCcEEEEEC-CCEE--EEEcCCCCCceECccCCcccccceeeeEEcCC-cEEEe-CCCce--EEEECCC
Confidence 56889999986556566664 5543 333332 2222111 12334777877643 34444 44453 3333332
Q ss_pred CCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCC
Q psy8748 1767 DSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDK 1846 (2004)
Q Consensus 1767 ~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DG 1846 (2004)
.. .................+....+..+..++..|.|..=+ +.|+.-..+.....+.+.++.+.+++.+++++. .|
T Consensus 118 G~--tW~~~~~~~~~~~~~~~i~~~~~~~~~~~g~~G~i~~S~-DgG~tW~~~~~~~~g~~~~i~~~~~g~~v~~g~-~G 193 (334)
T PRK13684 118 GK--NWTRIPLSEKLPGSPYLITALGPGTAEMATNVGAIYRTT-DGGKNWEALVEDAAGVVRNLRRSPDGKYVAVSS-RG 193 (334)
T ss_pred CC--CCeEccCCcCCCCCceEEEEECCCcceeeeccceEEEEC-CCCCCceeCcCCCcceEEEEEECCCCeEEEEeC-Cc
Confidence 21 111111100011111222223333344445555554322 233333233333456788999999887665554 56
Q ss_pred eEEEE-ECCCCe-EEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCC--CCCCCeEEEEEcCCC
Q psy8748 1847 SCKLW-DFREKK-CVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPP--NKNSGFTSCAVSSSG 1922 (2004)
Q Consensus 1847 sIrIW-Dlrs~k-~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~--~~~s~ItsLafSPdG 1922 (2004)
.+..- |- .++ -..........++++.+.++++.++++ ..|.+.+=..+.+..-.....+ .....+..+.+.+++
T Consensus 194 ~i~~s~~~-gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~ 271 (334)
T PRK13684 194 NFYSTWEP-GQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPG 271 (334)
T ss_pred eEEEEcCC-CCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCccccccCCccccccceeeEEEcCCC
Confidence 55432 22 222 112222345678999999999877765 4676653233444332222111 122457788999988
Q ss_pred CEEEEEeCCCeEEEEECCCCeeeEEEc---cCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1923 RYIFCGSDDNNVHVWDLLKTTHNGVLS---GHENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1923 ~~LaSGSsDGsIrIWDL~tge~l~tL~---gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
..+++| .+|.+. .....++.-.... .-......+.|..+++.++ .|..|.|--|+-.
T Consensus 272 ~~~~~G-~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~-~G~~G~il~~~~~ 331 (334)
T PRK13684 272 EIWAGG-GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFV-LGQRGVLLRYVGS 331 (334)
T ss_pred CEEEEc-CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEE-ECCCceEEEecCC
Confidence 766655 567554 3334444333332 2223578888877766555 5568888777643
No 368
>PHA02713 hypothetical protein; Provisional
Probab=96.30 E-value=0.21 Score=66.13 Aligned_cols=228 Identities=9% Similarity=0.078 Sum_probs=110.9
Q ss_pred eEEEEECCCCceEEEeeCCCCce-EEEEEecCCCEEEEeecC------CeEEEEEcCCCCCCCcceEEEEEecCccceee
Q psy8748 1715 KLIIWDTWTGNKTQVIPLRSAWV-MSVAFAQSGNFVACGGMD------NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSS 1787 (2004)
Q Consensus 1715 tIrVWDl~Tgk~l~ti~~Ht~~I-tsLafSPdg~~LaSGS~D------GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vss 1787 (2004)
.+..||..+++....-....... .+++. -++..++.||.+ ..+..||..+.. ........... .-.+
T Consensus 273 ~v~~yd~~~~~W~~l~~mp~~r~~~~~a~-l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~----W~~~~~m~~~R-~~~~ 346 (557)
T PHA02713 273 CILVYNINTMEYSVISTIPNHIINYASAI-VDNEIIIAGGYNFNNPSLNKVYKINIENKI----HVELPPMIKNR-CRFS 346 (557)
T ss_pred CEEEEeCCCCeEEECCCCCccccceEEEE-ECCEEEEEcCCCCCCCccceEEEEECCCCe----EeeCCCCcchh-hcee
Confidence 56778877765332211111111 12222 357777778754 246667765432 11111111111 1123
Q ss_pred eEEeCCCcEEEeecCC-----eEEEEECCCCceeEEeeccc-cCCeEEEEECCCCCEEEEEECCC---------------
Q psy8748 1788 CRFIDDTTLLTGSGDM-----KIVTWNLETGQRIHEVAQAH-IGDVVSISLSPDGQYFVTGSVDK--------------- 1846 (2004)
Q Consensus 1788 vafsdd~~LlSgS~DG-----tI~IWDl~tg~~i~~il~~h-~~~ItsLafSPdg~~LaSGS~DG--------------- 1846 (2004)
++..++...+.||.++ .+..||..+++......-.. ......+.+ +|+..+.||.++
T Consensus 347 ~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~~ 424 (557)
T PHA02713 347 LAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVL--DQYIYIIGGRTEHIDYTSVHHMNSIDM 424 (557)
T ss_pred EEEECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEE--CCEEEEEeCCCcccccccccccccccc
Confidence 3444666677777654 48889988765432110011 111112222 577777777553
Q ss_pred --------eEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCC------eEEEEEccC-CceeEEEcCCCCCC
Q psy8748 1847 --------SCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDK------TARLFDIRA-DQQIATYLPPNKNS 1911 (2004)
Q Consensus 1847 --------sIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DG------tIrIWDLrt-gk~i~t~~~~~~~s 1911 (2004)
.+..||..+.+-...-.-.......-...-+|+..+.|+.++ .+..||..+ .+-......+....
T Consensus 425 ~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~ 504 (557)
T PHA02713 425 EEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLS 504 (557)
T ss_pred cccccccceEEEECCCCCeEeecCCCCcccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccc
Confidence 477788776543211111111111111223566667776542 467898876 33322211122212
Q ss_pred CeEEEEEcCCCCEEEEEeCCC--eEEEEECCCCeeeEEEccCC
Q psy8748 1912 GFTSCAVSSSGRYIFCGSDDN--NVHVWDLLKTTHNGVLSGHE 1952 (2004)
Q Consensus 1912 ~ItsLafSPdG~~LaSGSsDG--sIrIWDL~tge~l~tL~gHs 1952 (2004)
....+. -+|++.++|+.+| .+..||..+.+-......|.
T Consensus 505 ~~~~~~--~~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~~~~ 545 (557)
T PHA02713 505 ALHTIL--HDNTIMMLHCYESYMLQDTFNVYTYEWNHICHQHS 545 (557)
T ss_pred cceeEE--ECCEEEEEeeecceeehhhcCcccccccchhhhcC
Confidence 222222 2788889999888 77788877665544444444
No 369
>KOG4441|consensus
Probab=96.28 E-value=0.2 Score=66.38 Aligned_cols=200 Identities=16% Similarity=0.228 Sum_probs=112.4
Q ss_pred eeeeEEeCCCcEEEeecC------CeEEEEECCCCceeEEe-eccccCCeEEEEECCCCCEEEEEECCC-----eEEEEE
Q psy8748 1785 LSSCRFIDDTTLLTGSGD------MKIVTWNLETGQRIHEV-AQAHIGDVVSISLSPDGQYFVTGSVDK-----SCKLWD 1852 (2004)
Q Consensus 1785 Vssvafsdd~~LlSgS~D------GtI~IWDl~tg~~i~~i-l~~h~~~ItsLafSPdg~~LaSGS~DG-----sIrIWD 1852 (2004)
-.+++..++..+++|+.| ..+..||..+++..... ......... ++. -+|...++||.|| ++-.||
T Consensus 325 ~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~-v~~-l~g~iYavGG~dg~~~l~svE~YD 402 (571)
T KOG4441|consen 325 RVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFG-VAV-LDGKLYAVGGFDGEKSLNSVECYD 402 (571)
T ss_pred cccEEEECCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccce-eEE-ECCEEEEEeccccccccccEEEec
Confidence 445566677778888888 35788998887744211 011111111 111 1578888999887 477888
Q ss_pred CCCCeEEEEEecCCCCeEEEEE-eCCCCEEEEEECCC------eEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEE
Q psy8748 1853 FREKKCVQTFFGHEADVNSVCF-HPSGLAFATGSEDK------TARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYI 1925 (2004)
Q Consensus 1853 lrs~k~I~tl~~h~s~ItsIaf-SPdg~~LaSgS~DG------tIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~L 1925 (2004)
..+.+-...- .......+... .-+|...++||.+| .+..||..+++....-.......... ...-++.+.
T Consensus 403 p~~~~W~~va-~m~~~r~~~gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g--~a~~~~~iY 479 (571)
T KOG4441|consen 403 PVTNKWTPVA-PMLTRRSGHGVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFG--VAVLNGKIY 479 (571)
T ss_pred CCCCcccccC-CCCcceeeeEEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccce--EEEECCEEE
Confidence 7765422111 11112222222 22677778887654 47788887665433322122112222 223367888
Q ss_pred EEEeCCCe-----EEEEECCCCeeeEE--EccCCCCeEEEEEcCCCCEEEEEECCC-----eEEEEECCCCeEEEEEEe
Q psy8748 1926 FCGSDDNN-----VHVWDLLKTTHNGV--LSGHENRVTSISLSPNGMALVTSSWDQ-----FVKVWQESNTIVWKVLKV 1992 (2004)
Q Consensus 1926 aSGSsDGs-----IrIWDL~tge~l~t--L~gHs~~VtsLaFSPDg~~LaSgS~DG-----tIrIWdlstg~l~k~Ik~ 1992 (2004)
++|+.||. |..||..+.+-... .......+....+ ++...+.||.|| +|..||..+++ |.....
T Consensus 480 vvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~rs~~g~~~~--~~~ly~vGG~~~~~~l~~ve~ydp~~d~-W~~~~~ 555 (571)
T KOG4441|consen 480 VVGGFDGTSALSSVERYDPETNQWTMVAPMTSPRSAVGVVVL--GGKLYAVGGFDGNNNLNTVECYDPETDT-WTEVTE 555 (571)
T ss_pred EECCccCCCccceEEEEcCCCCceeEcccCccccccccEEEE--CCEEEEEecccCccccceeEEcCCCCCc-eeeCCC
Confidence 88888763 77788766443322 2222333333333 667788888886 58889888774 766654
No 370
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=96.23 E-value=0.73 Score=63.02 Aligned_cols=198 Identities=14% Similarity=0.156 Sum_probs=124.3
Q ss_pred CCcEEEeecCCeEEEEECCCCceeEEeeccccC-------CeEEEEEC----------------CCCCEEEEEECCCeEE
Q psy8748 1793 DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIG-------DVVSISLS----------------PDGQYFVTGSVDKSCK 1849 (2004)
Q Consensus 1793 d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~-------~ItsLafS----------------Pdg~~LaSGS~DGsIr 1849 (2004)
++.++.++.++.|.-.|..+|+.+.+....... ....+++. .++..++.++.||.+.
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 557777888889999999998877665321110 01122221 1345788899999999
Q ss_pred EEECCCCeEEEEEecCCCCeE-------------EEEEeC--CCCEEEEEEC----------CCeEEEEEccCCceeEEE
Q psy8748 1850 LWDFREKKCVQTFFGHEADVN-------------SVCFHP--SGLAFATGSE----------DKTARLFDIRADQQIATY 1904 (2004)
Q Consensus 1850 IWDlrs~k~I~tl~~h~s~It-------------sIafSP--dg~~LaSgS~----------DGtIrIWDLrtgk~i~t~ 1904 (2004)
-.|.++++....+.. .+.+. .+.-.| .+..+++|+. +|.|+-+|.++|+....+
T Consensus 274 ALDA~TGk~~W~fg~-~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~ 352 (764)
T TIGR03074 274 ALDADTGKLCEDFGN-NGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW 352 (764)
T ss_pred EEECCCCCEEEEecC-CCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence 999999998876632 22211 111112 2345666643 688999999999999887
Q ss_pred cCCCC----------------CCCeEEEEEcCCCCEEEEEeC------------------CCeEEEEECCCCeeeEEEcc
Q psy8748 1905 LPPNK----------------NSGFTSCAVSSSGRYIFCGSD------------------DNNVHVWDLLKTTHNGVLSG 1950 (2004)
Q Consensus 1905 ~~~~~----------------~s~ItsLafSPdG~~LaSGSs------------------DGsIrIWDL~tge~l~tL~g 1950 (2004)
..... ...-...+++++...++.+.. .+.|.-.|.++|+....++.
T Consensus 353 ~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q~ 432 (764)
T TIGR03074 353 DPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQT 432 (764)
T ss_pred ecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEecc
Confidence 43110 001134566666666555331 34577778889998888765
Q ss_pred CCCCeEE---------EEEcC-CCC---EEEEEECCCeEEEEECCCCeEEEEEE
Q psy8748 1951 HENRVTS---------ISLSP-NGM---ALVTSSWDQFVKVWQESNTIVWKVLK 1991 (2004)
Q Consensus 1951 Hs~~Vts---------LaFSP-Dg~---~LaSgS~DGtIrIWdlstg~l~k~Ik 1991 (2004)
..+.+.+ +.+.. +|+ .++.++.+|.++++|.++|+.+-.++
T Consensus 433 ~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~ 486 (764)
T TIGR03074 433 VHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVE 486 (764)
T ss_pred cCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeece
Confidence 2222222 12222 553 79999999999999999997655443
No 371
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=96.17 E-value=0.16 Score=65.03 Aligned_cols=163 Identities=20% Similarity=0.151 Sum_probs=101.3
Q ss_pred ccCCeEEEEECCCCCEEEEEE---CC-CeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEE-CCCe--EEEEEc
Q psy8748 1823 HIGDVVSISLSPDGQYFVTGS---VD-KSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGS-EDKT--ARLFDI 1895 (2004)
Q Consensus 1823 h~~~ItsLafSPdg~~LaSGS---~D-GsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS-~DGt--IrIWDL 1895 (2004)
....+..-+|+|++..++... .. ..+.++|+.+++...... ..+.-..-+|+|||+.++.+. .||. |.++|+
T Consensus 191 ~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl 269 (425)
T COG0823 191 SGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDL 269 (425)
T ss_pred cCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCCccEEEEcC
Confidence 344566678899888655432 22 359999999876544432 233344567999998866544 4565 667777
Q ss_pred cCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeC-CCe--EEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEEC
Q psy8748 1896 RADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSD-DNN--VHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSW 1972 (2004)
Q Consensus 1896 rtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSs-DGs--IrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~ 1972 (2004)
.++.... +. ...+.-+.-.|+|||++++..++ .|. |.++|...... ..+....+.-..-.|+|||++++..+.
T Consensus 270 ~~~~~~~-Lt--~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~~p~~SpdG~~i~~~~~ 345 (425)
T COG0823 270 DGKNLPR-LT--NGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNSNPVWSPDGDKIVFESS 345 (425)
T ss_pred CCCccee-cc--cCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCcCccCCCCCCEEEEEec
Confidence 7666333 21 11122236789999999887655 444 66667655544 333333333337789999999988875
Q ss_pred C-Ce--EEEEECCCCeEEEEE
Q psy8748 1973 D-QF--VKVWQESNTIVWKVL 1990 (2004)
Q Consensus 1973 D-Gt--IrIWdlstg~l~k~I 1990 (2004)
. |. |.+.++.++..++.+
T Consensus 346 ~~g~~~i~~~~~~~~~~~~~l 366 (425)
T COG0823 346 SGGQWDIDKNDLASGGKIRIL 366 (425)
T ss_pred cCCceeeEEeccCCCCcEEEc
Confidence 3 44 777777666544443
No 372
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=96.15 E-value=0.38 Score=63.35 Aligned_cols=192 Identities=13% Similarity=0.172 Sum_probs=124.4
Q ss_pred CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEE----------EEECCCCCEEEEEECCCeEEEEECCCCeEEEEE
Q psy8748 1793 DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVS----------ISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTF 1862 (2004)
Q Consensus 1793 d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~Its----------LafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl 1862 (2004)
++.+++++.++.|+-+|..+|+.+.+........+.. +++ .+..+++++.||.+.-+|.++++.+...
T Consensus 69 ~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av--~~~~v~v~t~dg~l~ALDa~TGk~~W~~ 146 (527)
T TIGR03075 69 DGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVAL--YDGKVFFGTLDARLVALDAKTGKVVWSK 146 (527)
T ss_pred CCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceE--ECCEEEEEcCCCEEEEEECCCCCEEeec
Confidence 5577778888899999999998876653221111111 122 2456778889999999999999987765
Q ss_pred ecCCCC-eEEEEEeC---CCCEEEEEEC------CCeEEEEEccCCceeEEEcCCCCC----------------------
Q psy8748 1863 FGHEAD-VNSVCFHP---SGLAFATGSE------DKTARLFDIRADQQIATYLPPNKN---------------------- 1910 (2004)
Q Consensus 1863 ~~h~s~-ItsIafSP---dg~~LaSgS~------DGtIrIWDLrtgk~i~t~~~~~~~---------------------- 1910 (2004)
...... -..+.-+| ++ .++++.. +|.|.-+|.++|+.+..+......
T Consensus 147 ~~~~~~~~~~~tssP~v~~g-~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~~p~~~~~~~~~~~~~~~~~~~~tw~~ 225 (527)
T TIGR03075 147 KNGDYKAGYTITAAPLVVKG-KVITGISGGEFGVRGYVTAYDAKTGKLVWRRYTVPGDMGYLDKADKPVGGEPGAKTWPG 225 (527)
T ss_pred ccccccccccccCCcEEECC-EEEEeecccccCCCcEEEEEECCCCceeEeccCcCCCcccccccccccccccccCCCCC
Confidence 421110 00111112 34 4555542 689999999999998876432211
Q ss_pred -------CC-eEEEEEcCCCCEEEEEeCC-----C-----------eEEEEECCCCeeeEEEccCCCCeEE---------
Q psy8748 1911 -------SG-FTSCAVSSSGRYIFCGSDD-----N-----------NVHVWDLLKTTHNGVLSGHENRVTS--------- 1957 (2004)
Q Consensus 1911 -------s~-ItsLafSPdG~~LaSGSsD-----G-----------sIrIWDL~tge~l~tL~gHs~~Vts--------- 1957 (2004)
.. -..+++++...+++.+..+ + +|.-.|+++|+....++.....+.+
T Consensus 226 ~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~TG~~~W~~Q~~~~D~wD~d~~~~p~l 305 (527)
T TIGR03075 226 DAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPDTGKIKWHYQTTPHDEWDYDGVNEMIL 305 (527)
T ss_pred CccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccccCCEEEeeeCCCCCCccccCCCCcEE
Confidence 01 1245778877777777632 2 6777899999998888653333222
Q ss_pred EEEcCCCC---EEEEEECCCeEEEEECCCCeEE
Q psy8748 1958 ISLSPNGM---ALVTSSWDQFVKVWQESNTIVW 1987 (2004)
Q Consensus 1958 LaFSPDg~---~LaSgS~DGtIrIWdlstg~l~ 1987 (2004)
+.+..+|+ .++.++.+|.+++.|..+|+.+
T Consensus 306 ~d~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~i 338 (527)
T TIGR03075 306 FDLKKDGKPRKLLAHADRNGFFYVLDRTNGKLL 338 (527)
T ss_pred EEeccCCcEEEEEEEeCCCceEEEEECCCCcee
Confidence 22224665 7889999999999999999764
No 373
>PHA02713 hypothetical protein; Provisional
Probab=96.13 E-value=0.22 Score=66.04 Aligned_cols=193 Identities=8% Similarity=0.103 Sum_probs=103.6
Q ss_pred EEeCCCcEEEeecC------CeEEEEECCCCceeEEeec--cccCCeEEEEECCCCCEEEEEECCC-----eEEEEECCC
Q psy8748 1789 RFIDDTTLLTGSGD------MKIVTWNLETGQRIHEVAQ--AHIGDVVSISLSPDGQYFVTGSVDK-----SCKLWDFRE 1855 (2004)
Q Consensus 1789 afsdd~~LlSgS~D------GtI~IWDl~tg~~i~~il~--~h~~~ItsLafSPdg~~LaSGS~DG-----sIrIWDlrs 1855 (2004)
+..++..+++||.+ ..+..||..++... .... ...... +++. -+|+..+.||.+| .+..||..+
T Consensus 300 a~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~-~~~~m~~~R~~~-~~~~-~~g~IYviGG~~~~~~~~sve~Ydp~~ 376 (557)
T PHA02713 300 AIVDNEIIIAGGYNFNNPSLNKVYKINIENKIHV-ELPPMIKNRCRF-SLAV-IDDTIYAIGGQNGTNVERTIECYTMGD 376 (557)
T ss_pred EEECCEEEEEcCCCCCCCccceEEEEECCCCeEe-eCCCCcchhhce-eEEE-ECCEEEEECCcCCCCCCceEEEEECCC
Confidence 33455566666643 35788898877542 1111 011111 2222 2577778888764 488899876
Q ss_pred CeEEE--EEecCCCCeEEEEEeCCCCEEEEEECCC-----------------------eEEEEEccCCceeEEEcCCCCC
Q psy8748 1856 KKCVQ--TFFGHEADVNSVCFHPSGLAFATGSEDK-----------------------TARLFDIRADQQIATYLPPNKN 1910 (2004)
Q Consensus 1856 ~k~I~--tl~~h~s~ItsIafSPdg~~LaSgS~DG-----------------------tIrIWDLrtgk~i~t~~~~~~~ 1910 (2004)
.+-.. .+.........+ .-+|...+.||.++ .+..||..+.+-...- +-..
T Consensus 377 ~~W~~~~~mp~~r~~~~~~--~~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~--~m~~ 452 (557)
T PHA02713 377 DKWKMLPDMPIALSSYGMC--VLDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLP--NFWT 452 (557)
T ss_pred CeEEECCCCCcccccccEE--EECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecC--CCCc
Confidence 54221 111111111112 22577777777653 4777887765432211 1111
Q ss_pred CCeEEEEEcCCCCEEEEEeCC------CeEEEEECCC---CeeeEEEccCCCCeEEEEEcCCCCEEEEEECCC--eEEEE
Q psy8748 1911 SGFTSCAVSSSGRYIFCGSDD------NNVHVWDLLK---TTHNGVLSGHENRVTSISLSPNGMALVTSSWDQ--FVKVW 1979 (2004)
Q Consensus 1911 s~ItsLafSPdG~~LaSGSsD------GsIrIWDL~t---ge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DG--tIrIW 1979 (2004)
......+..-+|++.++|+.+ ..+..||..+ ++.+..+.........+.+ +|+..++||.|| .+..|
T Consensus 453 ~r~~~~~~~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~y 530 (557)
T PHA02713 453 GTIRPGVVSHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTF 530 (557)
T ss_pred ccccCcEEEECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhc
Confidence 111122223357777777754 2467898875 3344444333333333333 788899999998 78889
Q ss_pred ECCCCeEEEEEE
Q psy8748 1980 QESNTIVWKVLK 1991 (2004)
Q Consensus 1980 dlstg~l~k~Ik 1991 (2004)
|..+++ |..+.
T Consensus 531 d~~~~~-W~~~~ 541 (557)
T PHA02713 531 NVYTYE-WNHIC 541 (557)
T ss_pred Cccccc-ccchh
Confidence 998874 66554
No 374
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=96.08 E-value=0.56 Score=59.74 Aligned_cols=85 Identities=13% Similarity=0.234 Sum_probs=55.2
Q ss_pred cCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCC-----------------CCE-E
Q psy8748 1864 GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSS-----------------GRY-I 1925 (2004)
Q Consensus 1864 ~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPd-----------------G~~-L 1925 (2004)
.....+.+++.+|++++.++...=|+|.++|+.++..+..+..-.. ..+.-+..... ..+ +
T Consensus 305 D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRd-Aqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~Lv 383 (415)
T PF14655_consen 305 DSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRD-AQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLV 383 (415)
T ss_pred cCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCcc-ceEEEEEeecccccccccccccCCCCcceEEEE
Confidence 3445688999999999988888889999999998877666532111 11111111111 112 2
Q ss_pred EEEeCCCeEEEEECCCCeeeEEEc
Q psy8748 1926 FCGSDDNNVHVWDLLKTTHNGVLS 1949 (2004)
Q Consensus 1926 aSGSsDGsIrIWDL~tge~l~tL~ 1949 (2004)
+-+-.-|.|.||++++|..+..+.
T Consensus 384 IyaprRg~lEvW~~~~g~Rv~a~~ 407 (415)
T PF14655_consen 384 IYAPRRGILEVWSMRQGPRVAAFN 407 (415)
T ss_pred EEeccCCeEEEEecCCCCEEEEEE
Confidence 344567899999998887776654
No 375
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=96.05 E-value=4.7 Score=48.63 Aligned_cols=276 Identities=13% Similarity=0.082 Sum_probs=149.9
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCC--CCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCC
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLR--SAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTG 1770 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~H--t~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~ 1770 (2004)
+-+..+.++ +++...+..+.-++|.|+.+......+..- .+.-+++. -.|++..++..|.-..+.|+.+..
T Consensus 87 ~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~--vsGn~aYVadlddgfLivdvsdps--- 159 (370)
T COG5276 87 DLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVY--VSGNYAYVADLDDGFLIVDVSDPS--- 159 (370)
T ss_pred hhhheeEec--ccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEE--ecCCEEEEeeccCcEEEEECCCCC---
Confidence 456677777 456666667777999999887655443321 13334444 459999888866668888987653
Q ss_pred cceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEee-ccccCCeEEEEECCCCCEEEEEECCCeEE
Q psy8748 1771 AAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVA-QAHIGDVVSISLSPDGQYFVTGSVDKSCK 1849 (2004)
Q Consensus 1771 ~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il-~~h~~~ItsLafSPdg~~LaSGS~DGsIr 1849 (2004)
.................++. .+++...+..|+-+.+.|+.......-+- ......+.++..+++..+++..+ --+.
T Consensus 160 sP~lagrya~~~~d~~~v~I-SGn~AYvA~~d~GL~ivDVSnp~sPvli~~~n~g~g~~sv~vsdnr~y~vvy~--egvl 236 (370)
T COG5276 160 SPQLAGRYALPGGDTHDVAI-SGNYAYVAWRDGGLTIVDVSNPHSPVLIGSYNTGPGTYSVSVSDNRAYLVVYD--EGVL 236 (370)
T ss_pred CceeeeeeccCCCCceeEEE-ecCeEEEEEeCCCeEEEEccCCCCCeEEEEEecCCceEEEEecCCeeEEEEcc--cceE
Confidence 22223333333332233333 45677778889999999998765432221 12233678888876655555543 3577
Q ss_pred EEECCCCeEEEEEe--cCCCCeEEE-EEeCCCCEEEEEECCCeEEEEEccCCceeEEEcC-CCCCCCeEEEEEcCCCCEE
Q psy8748 1850 LWDFREKKCVQTFF--GHEADVNSV-CFHPSGLAFATGSEDKTARLFDIRADQQIATYLP-PNKNSGFTSCAVSSSGRYI 1925 (2004)
Q Consensus 1850 IWDlrs~k~I~tl~--~h~s~ItsI-afSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~-~~~~s~ItsLafSPdG~~L 1925 (2004)
+-|....+....+- .... +.++ .+.-.+++......+.-+.+-|+.+......... ......-..+.. .|.++
T Consensus 237 ivd~s~~ssp~~~gsyet~~-p~~~s~v~Vs~~~~Yvadga~gl~~idisnp~spfl~ss~~t~g~~a~gi~a--y~~y~ 313 (370)
T COG5276 237 IVDVSGPSSPTVFGSYETSN-PVSISTVPVSGEYAYVADGAKGLPIIDISNPPSPFLSSSLDTAGYQAAGIRA--YGNYN 313 (370)
T ss_pred EEecCCCCCceEeeccccCC-cccccceecccceeeeeccccCceeEeccCCCCCchhccccCCCccccceEE--ecCee
Confidence 77776655333331 2222 2222 2233455666666666666667654322111100 000011122222 34555
Q ss_pred EEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1926 FCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1926 aSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
..+..+ ...+-+....+......+....+.+.+.+-+.+.+.+...+|.+.+|+..
T Consensus 314 yiadkn-~g~vV~~s~~s~m~~~~g~~ti~~s~~v~~~~q~~y~~d~~~gl~i~~~~ 369 (370)
T COG5276 314 YIADKN-TGAVVDASPPSMMDKRPGRPTIGQSCDVSVDTQIIYSTDYNGGLSIIEYL 369 (370)
T ss_pred EeccCC-ceEEEeCCChhhcccccCcceEeeecceEEEeeEEEEeecCCCEEEEEec
Confidence 555544 44555554433333222222233444444455678888889989998753
No 376
>KOG1897|consensus
Probab=96.04 E-value=4 Score=55.57 Aligned_cols=286 Identities=15% Similarity=0.162 Sum_probs=148.1
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe-eCCCCceEEEEEecCC------CEEEEeecCCeEEEEEcCC
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVI-PLRSAWVMSVAFAQSG------NFVACGGMDNMCTVYDLNN 1765 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti-~~Ht~~ItsLafSPdg------~~LaSGS~DGtIrVWDl~t 1765 (2004)
+.++....+.+...++.++.++.+...++..+...... +.....|.|+.++|-| +++++|.++..+.+.-...
T Consensus 488 ~~~ti~~~~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~p 567 (1096)
T KOG1897|consen 488 GKITIGVVSANASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLP 567 (1096)
T ss_pred CceEEEEEeecceEEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECC
Confidence 44555555556667777777777777777766632222 2235678999998742 2788888877666655432
Q ss_pred CCCCCcceEEEEEecCcc---ceeeeEEe-CCCcEEEeecCCeEEEEECC--CCceeEEe-eccccCCeEEEEECCCCC-
Q psy8748 1766 RDSTGAAKVIRELLGYEG---FLSSCRFI-DDTTLLTGSGDMKIVTWNLE--TGQRIHEV-AQAHIGDVVSISLSPDGQ- 1837 (2004)
Q Consensus 1766 ~~~~~~~k~i~sl~gh~~---~Vssvafs-dd~~LlSgS~DGtI~IWDl~--tg~~i~~i-l~~h~~~ItsLafSPdg~- 1837 (2004)
.. ........+... .+.-..+- +..+++++..||.+..|-+. ++..-... ..-...++.--.|+..++
T Consensus 568 d~----~~~~~~~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t 643 (1096)
T KOG1897|consen 568 DL----ILITHEQLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRT 643 (1096)
T ss_pred Cc----ceeeeeccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCce
Confidence 21 111111111111 12222222 46789999999998776544 33321100 000111122112222111
Q ss_pred EEEEE-----------------------------------------ECCCeEEEEECCCCe--EEEEEecCCCCeEEEEE
Q psy8748 1838 YFVTG-----------------------------------------SVDKSCKLWDFREKK--CVQTFFGHEADVNSVCF 1874 (2004)
Q Consensus 1838 ~LaSG-----------------------------------------S~DGsIrIWDlrs~k--~I~tl~~h~s~ItsIaf 1874 (2004)
.+++. ...|.+++.-++.-+ .++++ ......+.+++
T Consensus 644 ~vfa~sdrP~viY~~n~kLv~spls~kev~~~c~f~s~a~~d~l~~~~~~~l~i~tid~iqkl~irtv-pl~~~prrI~~ 722 (1096)
T KOG1897|consen 644 AVFALSDRPTVIYSSNGKLVYSPLSLKEVNHMCPFNSDAYPDSLASANGGALTIGTIDEIQKLHIRTV-PLGESPRRICY 722 (1096)
T ss_pred EEEEeCCCCEEEEecCCcEEEeccchHHhhhhcccccccCCceEEEecCCceEEEEecchhhcceeee-cCCCChhheEe
Confidence 11111 112233333322111 12232 23455667788
Q ss_pred eCCCCEEEEEECC--------------CeEEEEEccCCceeEEEcCCCC--CCCeEEEEEcCC-CCEEEEEeC-------
Q psy8748 1875 HPSGLAFATGSED--------------KTARLFDIRADQQIATYLPPNK--NSGFTSCAVSSS-GRYIFCGSD------- 1930 (2004)
Q Consensus 1875 SPdg~~LaSgS~D--------------GtIrIWDLrtgk~i~t~~~~~~--~s~ItsLafSPd-G~~LaSGSs------- 1930 (2004)
.+....+.+.+.. ..++++|-++.+.......... ...+.++.|..| +.++++|+.
T Consensus 723 q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ 802 (1096)
T KOG1897|consen 723 QESSLTFGVLSNRIESSAEYYGEEYEVSFLRVLDQNTFEVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDEN 802 (1096)
T ss_pred cccceEEEEEecccccchhhcCCcceEEEEEEecCCceeEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCC
Confidence 7755555544421 1367777776666554433322 233556668887 778888863
Q ss_pred ---CCeEEEEECCCCeeeEEEccC--CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeE
Q psy8748 1931 ---DNNVHVWDLLKTTHNGVLSGH--ENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIV 1986 (2004)
Q Consensus 1931 ---DGsIrIWDL~tge~l~tL~gH--s~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l 1986 (2004)
.|.|.+|.+..+..+.....+ .+.+.++.. -+|+++|.-+ ..|++|+..+++.
T Consensus 803 ep~~GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~-fngkllA~In--~~vrLye~t~~~e 860 (1096)
T KOG1897|consen 803 EPVNGRIIVFEFEELNSLELVAETVVKGAVYALVE-FNGKLLAGIN--QSVRLYEWTTERE 860 (1096)
T ss_pred CcccceEEEEEEecCCceeeeeeeeeccceeehhh-hCCeEEEecC--cEEEEEEccccce
Confidence 588999888774444433222 344444432 2666666544 6799999988743
No 377
>PRK13616 lipoprotein LpqB; Provisional
Probab=95.98 E-value=0.46 Score=63.31 Aligned_cols=199 Identities=13% Similarity=0.096 Sum_probs=115.0
Q ss_pred cccceeEEEEeCCCCEEEEEe------CCC--eEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeE-EEE
Q psy8748 1691 HINKVNSVHYSGDSRHCVSGS------LDG--KLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMC-TVY 1761 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~LASGS------~DG--tIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtI-rVW 1761 (2004)
....+.+.+++|||+.++..- .|+ .|.+++. .+.......+. ....-.|+|+|..+++......+ ++.
T Consensus 348 ~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~~~lt~g~--~~t~PsWspDG~~lw~v~dg~~~~~v~ 424 (591)
T PRK13616 348 QMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVAVQVLEGH--SLTRPSWSLDADAVWVVVDGNTVVRVI 424 (591)
T ss_pred cccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcceeeecCC--CCCCceECCCCCceEEEecCcceEEEe
Confidence 334678999999999887654 243 4555564 33332222322 37788999999888776532211 111
Q ss_pred EcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEE
Q psy8748 1762 DLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVT 1841 (2004)
Q Consensus 1762 Dl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaS 1841 (2004)
.....+.+.+.+++.+.... ...+.|..+.|+|||..++.
T Consensus 425 ------------------------------------~~~~~gql~~~~vd~ge~~~----~~~g~Issl~wSpDG~RiA~ 464 (591)
T PRK13616 425 ------------------------------------RDPATGQLARTPVDASAVAS----RVPGPISELQLSRDGVRAAM 464 (591)
T ss_pred ------------------------------------ccCCCceEEEEeccCchhhh----ccCCCcCeEEECCCCCEEEE
Confidence 11124566666776655432 33567999999999998888
Q ss_pred EECCCeEEE---EECCCCeE-E---EEEe-cCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEE-cCCCCCCC
Q psy8748 1842 GSVDKSCKL---WDFREKKC-V---QTFF-GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATY-LPPNKNSG 1912 (2004)
Q Consensus 1842 GS~DGsIrI---WDlrs~k~-I---~tl~-~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~-~~~~~~s~ 1912 (2004)
.. +|.|++ -....+.. + ..+. .....+..+.|..++.++ ++..++...+|.+.-....... ...+....
T Consensus 465 i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v~vDG~~~~~~~~~n~~~~ 542 (591)
T PRK13616 465 II-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYVNLDGSNSDALPSRNLSAP 542 (591)
T ss_pred EE-CCEEEEEEEEeCCCCceeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEEecCCccccccCCCCccCc
Confidence 76 577777 44444431 1 1121 233346889999998854 5555555555654322222222 22223456
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEE
Q psy8748 1913 FTSCAVSSSGRYIFCGSDDNNVHV 1936 (2004)
Q Consensus 1913 ItsLafSPdG~~LaSGSsDGsIrI 1936 (2004)
+..++-++ ..+++.+.+|.+.+
T Consensus 543 v~~vaa~~--~~iyv~~~~g~~~l 564 (591)
T PRK13616 543 VVAVAASP--STVYVTDARAVLQL 564 (591)
T ss_pred eEEEecCC--ceEEEEcCCceEEe
Confidence 66777665 34666667774443
No 378
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=95.97 E-value=0.43 Score=61.17 Aligned_cols=202 Identities=20% Similarity=0.179 Sum_probs=117.1
Q ss_pred EEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEee---cC-CeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe
Q psy8748 1716 LIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGG---MD-NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI 1791 (2004)
Q Consensus 1716 IrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS---~D-GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs 1791 (2004)
+.+-|.. |.....+......+..-.|+|++..++... .. ..+.+++++.+.. ..+.. ..+.-..-.|+
T Consensus 175 l~~~D~d-g~~~~~l~~~~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~----~~i~~---~~g~~~~P~fs 246 (425)
T COG0823 175 LALGDYD-GYNQQKLTDSGSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKR----PVILN---FNGNNGAPAFS 246 (425)
T ss_pred EEEEccC-CcceeEecccCcceeccccCcCCCceEEEEEecCCCceEEEEeccCCcc----ceeec---cCCccCCccCC
Confidence 3344433 555555555556677788999988655442 22 4688899887632 22222 23333445566
Q ss_pred CCCc--EEEeecCCe--EEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECC-C--eEEEEECCCCeEEEEEec
Q psy8748 1792 DDTT--LLTGSGDMK--IVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVD-K--SCKLWDFREKKCVQTFFG 1864 (2004)
Q Consensus 1792 dd~~--LlSgS~DGt--I~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~D-G--sIrIWDlrs~k~I~tl~~ 1864 (2004)
+++. +++...||. |+++|+..+... + +....+.-+.-.|+|||++++..+.. | .|.++|.+.... ..+..
T Consensus 247 pDG~~l~f~~~rdg~~~iy~~dl~~~~~~-~-Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~ 323 (425)
T COG0823 247 PDGSKLAFSSSRDGSPDIYLMDLDGKNLP-R-LTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTF 323 (425)
T ss_pred CCCCEEEEEECCCCCccEEEEcCCCCcce-e-cccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeec
Confidence 5443 555556664 667788777633 2 22333333467899999988877643 3 377777766654 33333
Q ss_pred CCCCeEEEEEeCCCCEEEEEECC-Ce--EEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCC
Q psy8748 1865 HEADVNSVCFHPSGLAFATGSED-KT--ARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDD 1931 (2004)
Q Consensus 1865 h~s~ItsIafSPdg~~LaSgS~D-Gt--IrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsD 1931 (2004)
....-..-.|+|||++++..+.. |. |.+.|+.++.....+ ........-.|.++|+.+...+..
T Consensus 324 ~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~l---t~~~~~e~ps~~~ng~~i~~~s~~ 390 (425)
T COG0823 324 SGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRIL---TSTYLNESPSWAPNGRMIMFSSGQ 390 (425)
T ss_pred cCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEc---cccccCCCCCcCCCCceEEEeccC
Confidence 33333377899999998877753 44 666666655543332 112223445678888877655443
No 379
>KOG4640|consensus
Probab=95.90 E-value=0.03 Score=71.63 Aligned_cols=95 Identities=18% Similarity=0.263 Sum_probs=80.6
Q ss_pred cCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeE-EEEEeCCCCEEEEEECCCeEEEEEccCCceeE
Q psy8748 1824 IGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVN-SVCFHPSGLAFATGSEDKTARLFDIRADQQIA 1902 (2004)
Q Consensus 1824 ~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~It-sIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~ 1902 (2004)
...+.-+.|+|.-..+|.+..+|.|.++.+. .+.+.++.-++..++ +++|.|||+.+++|-.||+|++.|..++..+.
T Consensus 20 ~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 20 PINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred ccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 3457889999999999999999999999988 777888887777777 99999999999999999999999999998887
Q ss_pred EEcCCCCCCCeEEEEEcC
Q psy8748 1903 TYLPPNKNSGFTSCAVSS 1920 (2004)
Q Consensus 1903 t~~~~~~~s~ItsLafSP 1920 (2004)
.+.. .....|.++-|++
T Consensus 99 ~~~~-s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 99 SFLF-SVETDISKGIWDR 115 (665)
T ss_pred cccc-ccccchheeeccc
Confidence 7422 2335677777763
No 380
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=95.85 E-value=5.2 Score=50.86 Aligned_cols=240 Identities=15% Similarity=0.159 Sum_probs=126.9
Q ss_pred eEEEEEecCCCEEEEe-ecC----CeEEEEEcCCCCCCCcceEEE-EEecCccceeeeEEeCCC-cEEEeec--------
Q psy8748 1737 VMSVAFAQSGNFVACG-GMD----NMCTVYDLNNRDSTGAAKVIR-ELLGYEGFLSSCRFIDDT-TLLTGSG-------- 1801 (2004)
Q Consensus 1737 ItsLafSPdg~~LaSG-S~D----GtIrVWDl~t~~~~~~~k~i~-sl~gh~~~Vssvafsdd~-~LlSgS~-------- 1801 (2004)
+....++|+|++++.+ +.. ..++++|+.++. ... .+.. .....+.|.+++ .++....
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~------~l~d~i~~--~~~~~~~W~~d~~~~~y~~~~~~~~~~~ 197 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGK------FLPDGIEN--PKFSSVSWSDDGKGFFYTRFDEDQRTSD 197 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTE------EEEEEEEE--EESEEEEECTTSSEEEEEECSTTTSS-C
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCc------CcCCcccc--cccceEEEeCCCCEEEEEEeCccccccc
Confidence 4467889999988765 333 469999998762 221 1111 112237888663 3443332
Q ss_pred ---CCeEEEEECCCCcee-EEeeccccCC--eEEEEECCCCCEEEEEECC----CeEEEEECCCC----eEEEEEecCCC
Q psy8748 1802 ---DMKIVTWNLETGQRI-HEVAQAHIGD--VVSISLSPDGQYFVTGSVD----KSCKLWDFREK----KCVQTFFGHEA 1867 (2004)
Q Consensus 1802 ---DGtI~IWDl~tg~~i-~~il~~h~~~--ItsLafSPdg~~LaSGS~D----GsIrIWDlrs~----k~I~tl~~h~s 1867 (2004)
...|+.|.+.++..- ..++...... ...+..++++++++..... ..+++.|+..+ .....+.....
T Consensus 198 ~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~ 277 (414)
T PF02897_consen 198 SGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPRED 277 (414)
T ss_dssp CGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSS
T ss_pred CCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCC
Confidence 334888888776543 2233333322 5688899999988765433 34888888874 22333333344
Q ss_pred CeEEEEEeCCCCEEEEEE---CCCeEEEEEccCCce---eEEEcCCCCCCCeEEEEEcCCCCEEEE-EeCCC--eEEEEE
Q psy8748 1868 DVNSVCFHPSGLAFATGS---EDKTARLFDIRADQQ---IATYLPPNKNSGFTSCAVSSSGRYIFC-GSDDN--NVHVWD 1938 (2004)
Q Consensus 1868 ~ItsIafSPdg~~LaSgS---~DGtIrIWDLrtgk~---i~t~~~~~~~s~ItsLafSPdG~~LaS-GSsDG--sIrIWD 1938 (2004)
.+....-+..+.+++... .++.|...++..... ...+..+.....+..+. ..+++|+. ...++ .|++++
T Consensus 278 ~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~--~~~~~Lvl~~~~~~~~~l~v~~ 355 (414)
T PF02897_consen 278 GVEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVS--LFKDYLVLSYRENGSSRLRVYD 355 (414)
T ss_dssp S-EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEE--EETTEEEEEEEETTEEEEEEEE
T ss_pred ceEEEEEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEE--EECCEEEEEEEECCccEEEEEE
Confidence 443333333443444332 245677778776653 22332222222344443 44555554 44454 588999
Q ss_pred CCCCeeeEEEc-cCCCCeEEEEEcCCCCEEEE-E-EC--CCeEEEEECCCCeE
Q psy8748 1939 LLKTTHNGVLS-GHENRVTSISLSPNGMALVT-S-SW--DQFVKVWQESNTIV 1986 (2004)
Q Consensus 1939 L~tge~l~tL~-gHs~~VtsLaFSPDg~~LaS-g-S~--DGtIrIWdlstg~l 1986 (2004)
+..+.....+. .-.+.|..+...++++.+.. . |. -+++.-||+.+++.
T Consensus 356 ~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~t~~~ 408 (414)
T PF02897_consen 356 LDDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDLATGEL 408 (414)
T ss_dssp TT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEETTTTCE
T ss_pred CCCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEECCCCCE
Confidence 98344444443 23445666665565554332 2 22 36899999999864
No 381
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=95.84 E-value=0.011 Score=45.76 Aligned_cols=37 Identities=43% Similarity=0.654 Sum_probs=33.4
Q ss_pred ccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEE
Q psy8748 1684 PKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWD 1720 (2004)
Q Consensus 1684 pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWD 1720 (2004)
+...+.+|...|+++.|++++.++++++.||.+++|+
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 4 LLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 4566778999999999999999999999999999996
No 382
>KOG2444|consensus
Probab=95.78 E-value=0.01 Score=68.30 Aligned_cols=143 Identities=12% Similarity=0.103 Sum_probs=89.9
Q ss_pred EEEEECCCeEEEEECCCCeEEEE-EecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEE
Q psy8748 1839 FVTGSVDKSCKLWDFREKKCVQT-FFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCA 1917 (2004)
Q Consensus 1839 LaSGS~DGsIrIWDlrs~k~I~t-l~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLa 1917 (2004)
+...+.||.|+-++++..+.... -..+... .....-+..+++|+.+|.|.+|......................+.
T Consensus 33 l~~~sa~~~v~~~~~~k~k~s~rse~~~~e~---~~v~~~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip 109 (238)
T KOG2444|consen 33 LRATSADGLVRERKVRKHKESCRSERFIDEG---QRVVTASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIP 109 (238)
T ss_pred hccccCCcccccchhhhhhhhhhhhhhhhcc---eeecccCceEEeecccceEEEecCCccchHHHhhhcccccceeccc
Confidence 34445677887777764332111 1111111 1122235579999999999999986322222221112222222333
Q ss_pred EcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCC-CCeEEEEEcCCCCEEEEE--ECCCeEEEEECCCC
Q psy8748 1918 VSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHE-NRVTSISLSPNGMALVTS--SWDQFVKVWQESNT 1984 (2004)
Q Consensus 1918 fSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs-~~VtsLaFSPDg~~LaSg--S~DGtIrIWdlstg 1984 (2004)
.-.++.+..+++.||.|+.|++.-.+.+.....|. .++.....+..+.+++.+ |.|..++.|++..-
T Consensus 110 ~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~ 179 (238)
T KOG2444|consen 110 NGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEKI 179 (238)
T ss_pred cccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhhh
Confidence 33466789999999999999999999888888887 666666666677777777 77888888877653
No 383
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=95.72 E-value=0.025 Score=43.79 Aligned_cols=39 Identities=36% Similarity=0.570 Sum_probs=34.4
Q ss_pred CeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEE
Q psy8748 1942 TTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQ 1980 (2004)
Q Consensus 1942 ge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWd 1980 (2004)
+++...+..|...|.++.|++++..+++++.||.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 345666778899999999999999999999999999996
No 384
>PHA03098 kelch-like protein; Provisional
Probab=95.65 E-value=0.35 Score=63.60 Aligned_cols=188 Identities=13% Similarity=0.196 Sum_probs=94.2
Q ss_pred eEEEEECCCCceeEEeecc-ccCCeEEEEECCCCCEEEEEECCC-----eEEEEECCCCeEEEE--EecCCCCeEEEEEe
Q psy8748 1804 KIVTWNLETGQRIHEVAQA-HIGDVVSISLSPDGQYFVTGSVDK-----SCKLWDFREKKCVQT--FFGHEADVNSVCFH 1875 (2004)
Q Consensus 1804 tI~IWDl~tg~~i~~il~~-h~~~ItsLafSPdg~~LaSGS~DG-----sIrIWDlrs~k~I~t--l~~h~s~ItsIafS 1875 (2004)
.+..||..+++........ .......+.+ +++.++.||.++ .+..||..+++-... +...... .+++ .
T Consensus 312 ~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~-~~~~-~ 387 (534)
T PHA03098 312 SVVSYDTKTKSWNKVPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYN-PCVV-N 387 (534)
T ss_pred cEEEEeCCCCeeeECCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCcc-ceEE-E
Confidence 4677887766543211000 1111222222 567777787653 477888776542211 1111111 1222 2
Q ss_pred CCCCEEEEEECC------CeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCC--------CeEEEEECCC
Q psy8748 1876 PSGLAFATGSED------KTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDD--------NNVHVWDLLK 1941 (2004)
Q Consensus 1876 Pdg~~LaSgS~D------GtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsD--------GsIrIWDL~t 1941 (2004)
-++..++.||.+ +.+..||..+++-...-..+...... + +...++..++.|+.+ ..+.+||..+
T Consensus 388 ~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~-~-~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 465 (534)
T PHA03098 388 VNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGG-C-AIYHDGKIYVIGGISYIDNIKVYNIVESYNPVT 465 (534)
T ss_pred ECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCc-e-EEEECCEEEEECCccCCCCCcccceEEEecCCC
Confidence 356666667632 35888998765433221111111111 2 223356677777643 2388899876
Q ss_pred CeeeEE--EccCCCCeEEEEEcCCCCEEEEEECC-----CeEEEEECCCCeEEEEEEeecCCCCcc
Q psy8748 1942 TTHNGV--LSGHENRVTSISLSPNGMALVTSSWD-----QFVKVWQESNTIVWKVLKVYNLEKKTI 2000 (2004)
Q Consensus 1942 ge~l~t--L~gHs~~VtsLaFSPDg~~LaSgS~D-----GtIrIWdlstg~l~k~Ik~~~~h~~~V 2000 (2004)
.+-... ..........+.+ ++..++.||.+ +.|.+||..++ .|..+..+....+.|
T Consensus 466 ~~W~~~~~~~~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~p~~~~~~ 528 (534)
T PHA03098 466 NKWTELSSLNFPRINASLCIF--NNKIYVVGGDKYEYYINEIEVYDDKTN-TWTLFCKFPKVIGSL 528 (534)
T ss_pred CceeeCCCCCcccccceEEEE--CCEEEEEcCCcCCcccceeEEEeCCCC-EEEecCCCcccccce
Confidence 543221 1111111122222 67777777764 47899999876 488777655544444
No 385
>KOG4441|consensus
Probab=95.62 E-value=0.56 Score=62.35 Aligned_cols=228 Identities=15% Similarity=0.185 Sum_probs=119.7
Q ss_pred CCCCEEEEEeCCC------eEEEEECCCCceEEEeeCC-CCceEEEEEecCCCEEEEeecC-C-----eEEEEEcCCCCC
Q psy8748 1702 GDSRHCVSGSLDG------KLIIWDTWTGNKTQVIPLR-SAWVMSVAFAQSGNFVACGGMD-N-----MCTVYDLNNRDS 1768 (2004)
Q Consensus 1702 PDG~~LASGS~DG------tIrVWDl~Tgk~l~ti~~H-t~~ItsLafSPdg~~LaSGS~D-G-----tIrVWDl~t~~~ 1768 (2004)
..+..++.||.++ .+..+|..++......... ...-.+++.. ++...++||.| | .+..||.....
T Consensus 283 ~~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~- 360 (571)
T KOG4441|consen 283 VSGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQ- 360 (571)
T ss_pred CCCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCc-
Confidence 3455667777663 5778888777544433222 2223334443 56788889888 3 45666665543
Q ss_pred CCcceEEEEEecCccceeeeEEeCCCcEEEeecCCe-----EEEEECCCCceeEEeeccccCCeEEEEE-CCCCCEEEEE
Q psy8748 1769 TGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMK-----IVTWNLETGQRIHEVAQAHIGDVVSISL-SPDGQYFVTG 1842 (2004)
Q Consensus 1769 ~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGt-----I~IWDl~tg~~i~~il~~h~~~ItsLaf-SPdg~~LaSG 1842 (2004)
+........ ...-..++...+...++|+.||. |-.||..+.+....- .......+... .-+|...++|
T Consensus 361 ---W~~~a~M~~-~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va--~m~~~r~~~gv~~~~g~iYi~G 434 (571)
T KOG4441|consen 361 ---WTPVAPMNT-KRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVA--PMLTRRSGHGVAVLGGKLYIIG 434 (571)
T ss_pred ---eeccCCccC-ccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccC--CCCcceeeeEEEEECCEEEEEc
Confidence 111111111 11222344446667888888864 777888776543211 11111122111 2257788888
Q ss_pred ECCC------eEEEEECCCCeEEE--EEecCCCCeEEEEEeCCCCEEEEEECCCe-----EEEEEccCCceeEEEcCCCC
Q psy8748 1843 SVDK------SCKLWDFREKKCVQ--TFFGHEADVNSVCFHPSGLAFATGSEDKT-----ARLFDIRADQQIATYLPPNK 1909 (2004)
Q Consensus 1843 S~DG------sIrIWDlrs~k~I~--tl~~h~s~ItsIafSPdg~~LaSgS~DGt-----IrIWDLrtgk~i~t~~~~~~ 1909 (2004)
|.+| ++..||..++.-.. .+....... +++. -++...+.||.||. |..||..+.+-...-.....
T Consensus 435 G~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~-g~a~-~~~~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m~~~ 512 (571)
T KOG4441|consen 435 GGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGF-GVAV-LNGKIYVVGGFDGTSALSSVERYDPETNQWTMVAPMTSP 512 (571)
T ss_pred CcCCCccccceEEEEcCCCCceeecCCcccccccc-eEEE-ECCEEEEECCccCCCccceEEEEcCCCCceeEcccCccc
Confidence 8665 47788877654322 111111111 1222 25667888887763 77788876655443222222
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCC-----eEEEEECCC
Q psy8748 1910 NSGFTSCAVSSSGRYIFCGSDDN-----NVHVWDLLK 1941 (2004)
Q Consensus 1910 ~s~ItsLafSPdG~~LaSGSsDG-----sIrIWDL~t 1941 (2004)
...+..+. -++...++|+.|| +|..||..+
T Consensus 513 rs~~g~~~--~~~~ly~vGG~~~~~~l~~ve~ydp~~ 547 (571)
T KOG4441|consen 513 RSAVGVVV--LGGKLYAVGGFDGNNNLNTVECYDPET 547 (571)
T ss_pred cccccEEE--ECCEEEEEecccCccccceeEEcCCCC
Confidence 22222222 2567778888776 355665543
No 386
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=95.56 E-value=3.8 Score=51.32 Aligned_cols=263 Identities=16% Similarity=0.156 Sum_probs=134.3
Q ss_pred eCCCCEEEEEeC---------CCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCc
Q psy8748 1701 SGDSRHCVSGSL---------DGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGA 1771 (2004)
Q Consensus 1701 SPDG~~LASGS~---------DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~ 1771 (2004)
|||+++++.... .+.+.|||+.+++....... ...+....|+|+|+.++... ++.|.+++..++.
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~---- 74 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQ---- 74 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSE----
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCCCC----
Confidence 688888776422 46799999999766554333 56788999999999998886 5679998875531
Q ss_pred ceEEEEEec-------C---------ccceeeeEEeCCCc-EEE-eecCCeEEEEECCCCceeEEeecccc---CCeEEE
Q psy8748 1772 AKVIRELLG-------Y---------EGFLSSCRFIDDTT-LLT-GSGDMKIVTWNLETGQRIHEVAQAHI---GDVVSI 1830 (2004)
Q Consensus 1772 ~k~i~sl~g-------h---------~~~Vssvafsdd~~-LlS-gS~DGtI~IWDl~tg~~i~~il~~h~---~~ItsL 1830 (2004)
....+..+ . -+.-..+.|++++. ++. ...+..|..+.+.. ..... ..+..+
T Consensus 75 -~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~-------~~~~~~~yp~~~~~ 146 (353)
T PF00930_consen 75 -ETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPD-------YSPPDSQYPEVESI 146 (353)
T ss_dssp -EEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEE-------ESSSTESS-EEEEE
T ss_pred -eEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeec-------cCCccccCCccccc
Confidence 11111111 0 11224556665543 222 22233333322110 00111 123444
Q ss_pred EECCCCCEEEEEECCCeEEEEECCCCeEEE-E-E---ecCCCCeEEEEEeCCCCEEEEE--ECCC---eEEEEEccCCce
Q psy8748 1831 SLSPDGQYFVTGSVDKSCKLWDFREKKCVQ-T-F---FGHEADVNSVCFHPSGLAFATG--SEDK---TARLFDIRADQQ 1900 (2004)
Q Consensus 1831 afSPdg~~LaSGS~DGsIrIWDlrs~k~I~-t-l---~~h~s~ItsIafSPdg~~LaSg--S~DG---tIrIWDLrtgk~ 1900 (2004)
.+-.-|.--.. -.+.++|+.+++... . . ......+..+.|.+++..|+.. ..+. .+.++|..++..
T Consensus 147 ~YPk~G~~np~----v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~ 222 (353)
T PF00930_consen 147 RYPKAGDPNPR----VSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGET 222 (353)
T ss_dssp E--BTTS---E----EEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTC
T ss_pred ccCCCCCcCCc----eEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCce
Confidence 44322322211 147778888776422 1 1 2345568899999999844333 3332 377778877665
Q ss_pred eEEEc--CCCCCCCeEEEEEc-CCC-CEEEEEeCCCe--EEEEECCCCeeeEEEccCCCCeEE-EEEcCCCCEEE-EEEC
Q psy8748 1901 IATYL--PPNKNSGFTSCAVS-SSG-RYIFCGSDDNN--VHVWDLLKTTHNGVLSGHENRVTS-ISLSPNGMALV-TSSW 1972 (2004)
Q Consensus 1901 i~t~~--~~~~~s~ItsLafS-PdG-~~LaSGSsDGs--IrIWDL~tge~l~tL~gHs~~Vts-LaFSPDg~~La-SgS~ 1972 (2004)
..... ...--.......+. +++ .++.....+|- |++++...+. ...+....-.|+. +.|+++++.|+ ++..
T Consensus 223 ~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~~iyf~a~~ 301 (353)
T PF00930_consen 223 RVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERDGYRHLYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNNRIYFTANG 301 (353)
T ss_dssp EEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETTSSEEEEEEETTSSE-EEESS-SSS-EEEEEEEECTSSEEEEEESS
T ss_pred eEEEEecCCcceeeecccccccCCCCEEEEEEEcCCCcEEEEEcccccc-eeccccCceeecccceEcCCCCEEEEEecC
Confidence 43331 11111122344544 554 45555666775 5556665555 3455555566755 67788777654 4444
Q ss_pred C--C--eEEEEECC
Q psy8748 1973 D--Q--FVKVWQES 1982 (2004)
Q Consensus 1973 D--G--tIrIWdls 1982 (2004)
+ + .|+.-+++
T Consensus 302 ~~p~~r~lY~v~~~ 315 (353)
T PF00930_consen 302 DNPGERHLYRVSLD 315 (353)
T ss_dssp GGTTSBEEEEEETT
T ss_pred CCCCceEEEEEEeC
Confidence 2 2 44445555
No 387
>KOG2395|consensus
Probab=95.53 E-value=0.14 Score=64.78 Aligned_cols=138 Identities=17% Similarity=0.284 Sum_probs=95.1
Q ss_pred EEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCE-------EEEEECCCeEEEEEccCCce--eE--EEcCCC
Q psy8748 1840 VTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLA-------FATGSEDKTARLFDIRADQQ--IA--TYLPPN 1908 (2004)
Q Consensus 1840 aSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~-------LaSgS~DGtIrIWDLrtgk~--i~--t~~~~~ 1908 (2004)
..+.....++-.|+..|+.+..+.-+.. |+-+.+.|+.+. -+.|-.|..|.-||.+-... +. ....-.
T Consensus 350 ~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~kqy~ 428 (644)
T KOG2395|consen 350 MDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQSKQYS 428 (644)
T ss_pred eCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeeccccc
Confidence 3444556788899999999998877666 777777776432 34566788999999874332 11 111111
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCee-eEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Q psy8748 1909 KNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTH-NGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQE 1981 (2004)
Q Consensus 1909 ~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~-l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdl 1981 (2004)
......|.+-..+| +|++|+.+|.|++||- .+.. ...+.+-..+|..|..+.+|++|+..+ +..+.+-+.
T Consensus 429 ~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t 499 (644)
T KOG2395|consen 429 TKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDT 499 (644)
T ss_pred cccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEE
Confidence 22345566655554 7899999999999997 4443 345677889999999999999887766 455555554
No 388
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=95.40 E-value=3 Score=50.17 Aligned_cols=183 Identities=13% Similarity=0.104 Sum_probs=114.8
Q ss_pred ceeeeEEeCCCc-EEEeecCC--eEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEE
Q psy8748 1784 FLSSCRFIDDTT-LLTGSGDM--KIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQ 1860 (2004)
Q Consensus 1784 ~Vssvafsdd~~-LlSgS~DG--tI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~ 1860 (2004)
....+.|.+++. +-+.+.-| .|+.+|+.+++......-....---.++... ++.....-.+|...+||..+.+.+.
T Consensus 46 FTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~-d~l~qLTWk~~~~f~yd~~tl~~~~ 124 (264)
T PF05096_consen 46 FTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILG-DKLYQLTWKEGTGFVYDPNTLKKIG 124 (264)
T ss_dssp EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEET-TEEEEEESSSSEEEEEETTTTEEEE
T ss_pred cCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEEC-CEEEEEEecCCeEEEEccccceEEE
Confidence 344566644444 45555544 7999999999877555333333333444442 3334444568899999999999888
Q ss_pred EEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCC---CeEEEEEcCCCCEEEEEeCCCeEEEE
Q psy8748 1861 TFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNS---GFTSCAVSSSGRYIFCGSDDNNVHVW 1937 (2004)
Q Consensus 1861 tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s---~ItsLafSPdG~~LaSGSsDGsIrIW 1937 (2004)
++.- .+.-+.++ .++..++.+....+++++|..+.+....+....... .+.-+.+- +|...|-.-....|...
T Consensus 125 ~~~y-~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G~IyANVW~td~I~~I 200 (264)
T PF05096_consen 125 TFPY-PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NGKIYANVWQTDRIVRI 200 (264)
T ss_dssp EEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EEec-CCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cCEEEEEeCCCCeEEEE
Confidence 8754 45667777 456677777777889999998887776664433322 34455664 67666666667789999
Q ss_pred ECCCCeeeEEEcc------------C---CCCeEEEEEcCCCCEEEEEE
Q psy8748 1938 DLLKTTHNGVLSG------------H---ENRVTSISLSPNGMALVTSS 1971 (2004)
Q Consensus 1938 DL~tge~l~tL~g------------H---s~~VtsLaFSPDg~~LaSgS 1971 (2004)
|..+|++...+.. + .+-.+.||++|....+...|
T Consensus 201 dp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 201 DPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp ETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred eCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 9999999887631 1 34579999998776665555
No 389
>KOG2395|consensus
Probab=95.37 E-value=0.13 Score=64.83 Aligned_cols=141 Identities=14% Similarity=0.130 Sum_probs=102.3
Q ss_pred EEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCC-------EEEEeecCCeEEEEEcCCCCCCCcceEEEEEe
Q psy8748 1707 CVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGN-------FVACGGMDNMCTVYDLNNRDSTGAAKVIRELL 1779 (2004)
Q Consensus 1707 LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~-------~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~ 1779 (2004)
+.+++....++-.|++.|+.+...+.+.. |.-+.+.|+.+ .-+.|-.+..|.-||.+-... ..+....
T Consensus 349 l~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~----~kl~~~q 423 (644)
T KOG2395|consen 349 LMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGK----NKLAVVQ 423 (644)
T ss_pred eeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCc----ceeeeee
Confidence 33455556788889999999999988877 77777777643 224566677788898874321 0111111
Q ss_pred ----cCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q psy8748 1780 ----GYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFR 1854 (2004)
Q Consensus 1780 ----gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlr 1854 (2004)
.......|.+-..++++++|+.+|.|++||- .+....+.+.+...+|..+..+.+|++++..+ +..+.+.++.
T Consensus 424 ~kqy~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t~ 500 (644)
T KOG2395|consen 424 SKQYSTKNNFSCFATTESGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDTL 500 (644)
T ss_pred ccccccccccceeeecCCceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEEe
Confidence 2234556667678899999999999999998 66666677788899999999999999887665 5677777653
No 390
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=95.34 E-value=3.2 Score=51.18 Aligned_cols=220 Identities=13% Similarity=0.118 Sum_probs=122.7
Q ss_pred EEEeCCCCE-EEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEE
Q psy8748 1698 VHYSGDSRH-CVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIR 1776 (2004)
Q Consensus 1698 LaFSPDG~~-LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~ 1776 (2004)
-.|.++... +.+--..+.|.-|+..+++... +.. .+.+.++..-..+..|+++. .| +.+++.+.+.. .....
T Consensus 30 P~w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~-~~~-p~~~~~~~~~d~~g~Lv~~~-~g-~~~~~~~~~~~---~t~~~ 102 (307)
T COG3386 30 PVWDPDRGALLWVDILGGRIHRLDPETGKKRV-FPS-PGGFSSGALIDAGGRLIACE-HG-VRLLDPDTGGK---ITLLA 102 (307)
T ss_pred ccCcCCCCEEEEEeCCCCeEEEecCCcCceEE-EEC-CCCcccceeecCCCeEEEEc-cc-cEEEeccCCce---eEEec
Confidence 356666663 4455567888889887664332 222 22334444444455555443 22 56666643321 01111
Q ss_pred EEe-cC-ccceeeeEEeCCCcEEEeecC------------CeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEE
Q psy8748 1777 ELL-GY-EGFLSSCRFIDDTTLLTGSGD------------MKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTG 1842 (2004)
Q Consensus 1777 sl~-gh-~~~Vssvafsdd~~LlSgS~D------------GtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSG 1842 (2004)
... +. ..........+++.+..++.. |.|+.+|. .+... +....+-..-..++|+||++.++.+
T Consensus 103 ~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p-~g~~~-~l~~~~~~~~NGla~SpDg~tly~a 180 (307)
T COG3386 103 EPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDP-DGGVV-RLLDDDLTIPNGLAFSPDGKTLYVA 180 (307)
T ss_pred cccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcC-CCCEE-EeecCcEEecCceEECCCCCEEEEE
Confidence 111 11 122333444445555555444 33444454 33333 3444445556789999999888877
Q ss_pred ECC-CeEEEEECCC--C----eE-EEEEecCCCCeEEEEEeCCCCEEEEEECCC-eEEEEEccCCceeEEEcCCCCCCCe
Q psy8748 1843 SVD-KSCKLWDFRE--K----KC-VQTFFGHEADVNSVCFHPSGLAFATGSEDK-TARLFDIRADQQIATYLPPNKNSGF 1913 (2004)
Q Consensus 1843 S~D-GsIrIWDlrs--~----k~-I~tl~~h~s~ItsIafSPdg~~LaSgS~DG-tIrIWDLrtgk~i~t~~~~~~~s~I 1913 (2004)
... +.|+-|++.. + +. ...+....+..-.++...+|.+.+++..+| .|.+|+.. ++.+..+..+. ..+
T Consensus 181 DT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~--~~~ 257 (307)
T COG3386 181 DTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPV--KRP 257 (307)
T ss_pred eCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCC--CCC
Confidence 654 7788887752 1 11 122223445666788888898776555554 89999998 88888886654 446
Q ss_pred EEEEEcC-CCCEEEEEe
Q psy8748 1914 TSCAVSS-SGRYIFCGS 1929 (2004)
Q Consensus 1914 tsLafSP-dG~~LaSGS 1929 (2004)
++++|-- +.+.|++.+
T Consensus 258 t~~~FgG~~~~~L~iTs 274 (307)
T COG3386 258 TNPAFGGPDLNTLYITS 274 (307)
T ss_pred ccceEeCCCcCEEEEEe
Confidence 6777643 445555443
No 391
>KOG4640|consensus
Probab=95.30 E-value=0.072 Score=68.41 Aligned_cols=76 Identities=16% Similarity=0.231 Sum_probs=68.6
Q ss_pred cccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceE-EEEEecCCCEEEEeecCCeEEEEEcCCCC
Q psy8748 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVM-SVAFAQSGNFVACGGMDNMCTVYDLNNRD 1767 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~It-sLafSPdg~~LaSGS~DGtIrVWDl~t~~ 1767 (2004)
-.-.|.-+.|+|.-..+|++..+|.|.+..+. .+.+.+++.|+..++ +++|.|||+.+++|-.||+|++.|++++.
T Consensus 19 l~~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 19 LPINIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGG 95 (665)
T ss_pred cccceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCC
Confidence 34568889999999999999999999999987 888889998888787 99999999999999999999999998764
No 392
>PRK10115 protease 2; Provisional
Probab=95.23 E-value=8.5 Score=52.66 Aligned_cols=239 Identities=9% Similarity=-0.005 Sum_probs=118.0
Q ss_pred cceeEEEEeCCCCEEEEEeC-----CCeEEEEECCCCceEEE-eeCCCCceEEEEEecCCCEEEEeecC------CeEEE
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSL-----DGKLIIWDTWTGNKTQV-IPLRSAWVMSVAFAQSGNFVACGGMD------NMCTV 1760 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~-----DGtIrVWDl~Tgk~l~t-i~~Ht~~ItsLafSPdg~~LaSGS~D------GtIrV 1760 (2004)
-.+..+.|||||++|+.+.+ ...|++-|+.+|..+.. +..- . ..++|.+|++.|+.+..+ ..|..
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~-~--~~~~w~~D~~~~~y~~~~~~~~~~~~v~~ 203 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV-E--PSFVWANDSWTFYYVRKHPVTLLPYQVWR 203 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc-c--eEEEEeeCCCEEEEEEecCCCCCCCEEEE
Confidence 34777899999998886533 24588999988864322 2221 1 468999999877665442 35666
Q ss_pred EEcCCCCCCCcceEEEEEecCcccee-eeEEe-CCCcEEEee---cCCeEEEEECC--CCceeEEeeccccCCeEEEEEC
Q psy8748 1761 YDLNNRDSTGAAKVIRELLGYEGFLS-SCRFI-DDTTLLTGS---GDMKIVTWNLE--TGQRIHEVAQAHIGDVVSISLS 1833 (2004)
Q Consensus 1761 WDl~t~~~~~~~k~i~sl~gh~~~Vs-svafs-dd~~LlSgS---~DGtI~IWDl~--tg~~i~~il~~h~~~ItsLafS 1833 (2004)
+++.++.. .-..+.. ....... ..... ++..++..+ .++.+.+|+.. .+... .......+....+. +
T Consensus 204 h~lgt~~~--~d~lv~~--e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~-~ 277 (686)
T PRK10115 204 HTIGTPAS--QDELVYE--EKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPF-VFLPRRKDHEYSLD-H 277 (686)
T ss_pred EECCCChh--HCeEEEe--eCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCce-EEEECCCCCEEEEE-e
Confidence 67665421 1122222 1112122 22223 444444333 34578888853 33322 11111222222222 3
Q ss_pred CCCCEEEEEECCC----eEEEEECCCCeEEEEEecC-C-CCeEEEEEeCCCCEEEEEECCCeEEEEEccC-CceeEEEcC
Q psy8748 1834 PDGQYFVTGSVDK----SCKLWDFREKKCVQTFFGH-E-ADVNSVCFHPSGLAFATGSEDKTARLFDIRA-DQQIATYLP 1906 (2004)
Q Consensus 1834 Pdg~~LaSGS~DG----sIrIWDlrs~k~I~tl~~h-~-s~ItsIafSPdg~~LaSgS~DGtIrIWDLrt-gk~i~t~~~ 1906 (2004)
.. ..++..+..+ .|...++........+..+ . ..|..+.+. .+..+++...+|.-+++-+.. +.....+..
T Consensus 278 ~~-~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~ 355 (686)
T PRK10115 278 YQ-HRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF-TDWLVVEERQRGLTSLRQINRKTREVIGIAF 355 (686)
T ss_pred CC-CEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE-CCEEEEEEEeCCEEEEEEEcCCCCceEEecC
Confidence 23 3444443322 3444455422222333344 2 367888887 334566666677655554432 223333321
Q ss_pred CCCCCCeEEEEEc--CCCC-EEEEEeC---CCeEEEEECCCCe
Q psy8748 1907 PNKNSGFTSCAVS--SSGR-YIFCGSD---DNNVHVWDLLKTT 1943 (2004)
Q Consensus 1907 ~~~~s~ItsLafS--PdG~-~LaSGSs---DGsIrIWDL~tge 1943 (2004)
.. ...+..+.++ +++. ++++.++ -+.++.+|..+++
T Consensus 356 ~~-~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~ 397 (686)
T PRK10115 356 DD-PAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE 397 (686)
T ss_pred CC-CceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence 11 1223333344 3444 4444333 3678999987764
No 393
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=94.88 E-value=0.76 Score=48.27 Aligned_cols=101 Identities=24% Similarity=0.294 Sum_probs=68.0
Q ss_pred eEEEEECC---CC-CEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeE
Q psy8748 1827 VVSISLSP---DG-QYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIA 1902 (2004)
Q Consensus 1827 ItsLafSP---dg-~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~ 1902 (2004)
|+++++.. +| +.|++|+.|..|++|+-. ..+..+.. .+.|.+++-... ..|+.+..+|+|-+|+- .....
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~e-~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~--~~RlW 75 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEITE-TDKVTSLCSLGG-GRFAYALANGTVGVYDR--SQRLW 75 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEec-ccceEEEEEcCC-CEEEEEecCCEEEEEeC--cceee
Confidence 55666544 32 589999999999999843 55566643 566777777666 57899999999999985 33444
Q ss_pred EEcCCCCCCCeEEEEEcC-C--C-CEEEEEeCCCeEEE
Q psy8748 1903 TYLPPNKNSGFTSCAVSS-S--G-RYIFCGSDDNNVHV 1936 (2004)
Q Consensus 1903 t~~~~~~~s~ItsLafSP-d--G-~~LaSGSsDGsIrI 1936 (2004)
...... .++++++.. + | .-|++|-.+|.|-+
T Consensus 76 RiKSK~---~~~~~~~~D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 76 RIKSKN---QVTSMAFYDINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred eeccCC---CeEEEEEEcCCCCCceEEEEEecCCeEEe
Confidence 443222 345554433 3 2 36888988998753
No 394
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=94.87 E-value=16 Score=46.36 Aligned_cols=256 Identities=14% Similarity=0.109 Sum_probs=118.2
Q ss_pred ECCCCceEEEeeCCCCce-----EEEEEecCCCEEEEe-ecCCe--EEEEEcCCCCCCCcceEEEEEecCc--cceeeeE
Q psy8748 1720 DTWTGNKTQVIPLRSAWV-----MSVAFAQSGNFVACG-GMDNM--CTVYDLNNRDSTGAAKVIRELLGYE--GFLSSCR 1789 (2004)
Q Consensus 1720 Dl~Tgk~l~ti~~Ht~~I-----tsLafSPdg~~LaSG-S~DGt--IrVWDl~t~~~~~~~k~i~sl~gh~--~~Vssva 1789 (2004)
|..||..+..+......- +.=+|.++|+.|+.+ ..+|. +.+.|+.++ + +..+.... .....+.
T Consensus 16 D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~------~-i~QLTdg~g~~~~g~~~ 88 (386)
T PF14583_consen 16 DPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATG------E-ITQLTDGPGDNTFGGFL 88 (386)
T ss_dssp -TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-------E-EEE---SS-B-TTT-EE
T ss_pred CCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccC------E-EEECccCCCCCccceEE
Confidence 667777776665433322 223677888755554 44554 555555543 2 22222221 1222222
Q ss_pred EeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEE--CCCCCEEEEEEC----------------------C
Q psy8748 1790 FIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISL--SPDGQYFVTGSV----------------------D 1845 (2004)
Q Consensus 1790 fsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLaf--SPdg~~LaSGS~----------------------D 1845 (2004)
..+++.++-...+..|+-.|+.+.+.. .+.......+-...| +.++..++..-. .
T Consensus 89 s~~~~~~~Yv~~~~~l~~vdL~T~e~~-~vy~~p~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~ 167 (386)
T PF14583_consen 89 SPDDRALYYVKNGRSLRRVDLDTLEER-VVYEVPDDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPH 167 (386)
T ss_dssp -TTSSEEEEEETTTEEEEEETTT--EE-EEEE--TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---
T ss_pred ecCCCeEEEEECCCeEEEEECCcCcEE-EEEECCcccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCC
Confidence 234444555555678888999987653 333333333433444 345555433211 1
Q ss_pred CeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCC-----eEEEEEccC-CceeEEEcCCCCCCCeEEEEEc
Q psy8748 1846 KSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDK-----TARLFDIRA-DQQIATYLPPNKNSGFTSCAVS 1919 (2004)
Q Consensus 1846 GsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DG-----tIrIWDLrt-gk~i~t~~~~~~~s~ItsLafS 1919 (2004)
..|.-.|+.+|+... +......+..+.|+|....+++=|..| .-+||-+++ +..............+..=-|.
T Consensus 168 ~~i~~idl~tG~~~~-v~~~~~wlgH~~fsP~dp~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~ 246 (386)
T PF14583_consen 168 CRIFTIDLKTGERKV-VFEDTDWLGHVQFSPTDPTLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWV 246 (386)
T ss_dssp EEEEEEETTT--EEE-EEEESS-EEEEEEETTEEEEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-
T ss_pred ceEEEEECCCCceeE-EEecCccccCcccCCCCCCEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCccccccccc
Confidence 246667888877543 334567788999999655544443333 135665543 3333333323333445566789
Q ss_pred CCCCEEEEEe-----CCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCC----------------eEEE
Q psy8748 1920 SSGRYIFCGS-----DDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQ----------------FVKV 1978 (2004)
Q Consensus 1920 PdG~~LaSGS-----sDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DG----------------tIrI 1978 (2004)
+||..|..-+ .+..|.-+|..+++...... ......+.-++||++++-=|.|. .|++
T Consensus 247 ~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~--~p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~ 324 (386)
T PF14583_consen 247 PDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLME--MPWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYL 324 (386)
T ss_dssp TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEE--E-SEEEEEE-TTSSEEEEEE-------------------EEEE
T ss_pred CCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEe--CCceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEE
Confidence 9998776432 23457778888876644332 22455666778999876655442 5667
Q ss_pred EECCCCeE
Q psy8748 1979 WQESNTIV 1986 (2004)
Q Consensus 1979 Wdlstg~l 1986 (2004)
+++..+..
T Consensus 325 ~~~~~~~~ 332 (386)
T PF14583_consen 325 FDVEAGRF 332 (386)
T ss_dssp EETTTTEE
T ss_pred eccccCce
Confidence 88887754
No 395
>PRK13616 lipoprotein LpqB; Provisional
Probab=94.87 E-value=0.6 Score=62.21 Aligned_cols=148 Identities=11% Similarity=0.040 Sum_probs=89.5
Q ss_pred CCeEEEEECCCCCEEEEEE------CCC--eEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECC---------
Q psy8748 1825 GDVVSISLSPDGQYFVTGS------VDK--SCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSED--------- 1887 (2004)
Q Consensus 1825 ~~ItsLafSPdg~~LaSGS------~DG--sIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~D--------- 1887 (2004)
..+.+.+++|+|+.++... .|+ .|.+++.. +.. ..+.. ......-.|+|+|..+++....
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~g-g~~-~~lt~-g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~ 426 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLG-GVA-VQVLE-GHSLTRPSWSLDADAVWVVVDGNTVVRVIRD 426 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCC-Ccc-eeeec-CCCCCCceECCCCCceEEEecCcceEEEecc
Confidence 4678899999999887665 233 56666653 222 22222 2247888999998887777533
Q ss_pred ---CeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEE---EECCCCeee----EEE-ccCCCCeE
Q psy8748 1888 ---KTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHV---WDLLKTTHN----GVL-SGHENRVT 1956 (2004)
Q Consensus 1888 ---GtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrI---WDL~tge~l----~tL-~gHs~~Vt 1956 (2004)
+.+.+.+++.+.... .....|..+.|+|||..++... +|.|++ -....|+.. ..+ .+-...+.
T Consensus 427 ~~~gql~~~~vd~ge~~~-----~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l~~~l~~~~~ 500 (591)
T PRK13616 427 PATGQLARTPVDASAVAS-----RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREVGPGLGDTAV 500 (591)
T ss_pred CCCceEEEEeccCchhhh-----ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEeecccCCccc
Confidence 222222333222211 1235699999999999988766 578877 443445411 112 22334468
Q ss_pred EEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1957 SISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1957 sLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
++.|..++.++ .+..++...+|.+.
T Consensus 501 ~l~W~~~~~L~-V~~~~~~~~v~~v~ 525 (591)
T PRK13616 501 SLDWRTGDSLV-VGRSDPEHPVWYVN 525 (591)
T ss_pred cceEecCCEEE-EEecCCCCceEEEe
Confidence 89999999854 55555555566543
No 396
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=94.85 E-value=2 Score=54.82 Aligned_cols=83 Identities=14% Similarity=0.178 Sum_probs=58.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEE-EEEc-CC----------------CC-EEEEE
Q psy8748 1910 NSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTS-ISLS-PN----------------GM-ALVTS 1970 (2004)
Q Consensus 1910 ~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~Vts-LaFS-PD----------------g~-~LaSg 1970 (2004)
...+.+++.+|++++.++.+.-|+|.++|+.++..++.++|..+.=.. +... .. .. +++-+
T Consensus 307 ~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIya 386 (415)
T PF14655_consen 307 KREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYA 386 (415)
T ss_pred CceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEe
Confidence 345788999999999999888899999999999888888765443111 1111 10 11 24456
Q ss_pred ECCCeEEEEECCCCeEEEEEEe
Q psy8748 1971 SWDQFVKVWQESNTIVWKVLKV 1992 (2004)
Q Consensus 1971 S~DGtIrIWdlstg~l~k~Ik~ 1992 (2004)
-.-|.|.||++..|.....+..
T Consensus 387 prRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 387 PRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred ccCCeEEEEecCCCCEEEEEEe
Confidence 6789999999999865544443
No 397
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=94.83 E-value=11 Score=45.59 Aligned_cols=195 Identities=13% Similarity=0.120 Sum_probs=118.0
Q ss_pred eEEEeeC-CCCceEEEEEecCCCEEEEeecCC--eEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecC
Q psy8748 1726 KTQVIPL-RSAWVMSVAFAQSGNFVACGGMDN--MCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGD 1802 (2004)
Q Consensus 1726 ~l~ti~~-Ht~~ItsLafSPdg~~LaSGS~DG--tIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~D 1802 (2004)
.+.+++. ......++.|..+|.++-+.|.-| .|+.+|+.+++. .........-.-..++..++......-.+
T Consensus 35 vv~~ypHd~~aFTQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~-----~~~~~l~~~~FgEGit~~~d~l~qLTWk~ 109 (264)
T PF05096_consen 35 VVETYPHDPTAFTQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKV-----LQSVPLPPRYFGEGITILGDKLYQLTWKE 109 (264)
T ss_dssp EEEEEE--TT-EEEEEEEEETTEEEEEECSTTEEEEEEEETTTSSE-----EEEEE-TTT--EEEEEEETTEEEEEESSS
T ss_pred EEEECCCCCcccCccEEecCCCEEEEeCCCCCcEEEEEEECCCCcE-----EEEEECCccccceeEEEECCEEEEEEecC
Confidence 3444442 345567888878888888888777 788888876531 11222222333445555566556666678
Q ss_pred CeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecC--C---CCeEEEEEeCC
Q psy8748 1803 MKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGH--E---ADVNSVCFHPS 1877 (2004)
Q Consensus 1803 GtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h--~---s~ItsIafSPd 1877 (2004)
+...+||..+-+.+.++.. .+.=+.++ .++..|+.+.....++++|..+.+....+.-. . ..++-+.|. +
T Consensus 110 ~~~f~yd~~tl~~~~~~~y--~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~ 184 (264)
T PF05096_consen 110 GTGFVYDPNTLKKIGTFPY--PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-N 184 (264)
T ss_dssp SEEEEEETTTTEEEEEEE---SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-T
T ss_pred CeEEEEccccceEEEEEec--CCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-c
Confidence 9999999999888766633 34556676 35777888777788999998887766655422 2 234556665 5
Q ss_pred CCEEEEEECCCeEEEEEccCCceeEEEcC----------C---CCCCCeEEEEEcCCCCEEEEEeC
Q psy8748 1878 GLAFATGSEDKTARLFDIRADQQIATYLP----------P---NKNSGFTSCAVSSSGRYIFCGSD 1930 (2004)
Q Consensus 1878 g~~LaSgS~DGtIrIWDLrtgk~i~t~~~----------~---~~~s~ItsLafSPdG~~LaSGSs 1930 (2004)
|...+=.-....|...|..+|+....+.. . ....-...++++|.++.+.+.+.
T Consensus 185 G~IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTGK 250 (264)
T PF05096_consen 185 GKIYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTGK 250 (264)
T ss_dssp TEEEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEET
T ss_pred CEEEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEeC
Confidence 65555455567788889999988776511 0 11345789999987665554443
No 398
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=94.77 E-value=9.8 Score=47.42 Aligned_cols=238 Identities=14% Similarity=0.134 Sum_probs=119.3
Q ss_pred ceeEEEEeCCCCEEEEEeCCCeEEEEECCCCce---EEEe----eCCCCceEEEEEecC----CCEEEEeecC-------
Q psy8748 1694 KVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNK---TQVI----PLRSAWVMSVAFAQS----GNFVACGGMD------- 1755 (2004)
Q Consensus 1694 ~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~---l~ti----~~Ht~~ItsLafSPd----g~~LaSGS~D------- 1755 (2004)
..++|+|.|||+.+++ ...|.|++++ .++.. +..+ .........++++|+ +.+.++.+..
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~ 80 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDN 80 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSE
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCc
Confidence 4578999999987665 5699999999 55554 2222 123456899999994 3333333321
Q ss_pred -CeEEEEEcCCCC--CCCcceEEEEEec---CccceeeeEEeCCCcEEEeecC--------------CeEEEEECCCCc-
Q psy8748 1756 -NMCTVYDLNNRD--STGAAKVIRELLG---YEGFLSSCRFIDDTTLLTGSGD--------------MKIVTWNLETGQ- 1814 (2004)
Q Consensus 1756 -GtIrVWDl~t~~--~~~~~k~i~sl~g---h~~~Vssvafsdd~~LlSgS~D--------------GtI~IWDl~tg~- 1814 (2004)
..|.-|...... .......+..... .......+.|.+++.|+++..+ |.|.-.+....-
T Consensus 81 ~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~~p 160 (331)
T PF07995_consen 81 DNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGSIP 160 (331)
T ss_dssp EEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSSB-
T ss_pred ceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEecccCcCC
Confidence 244445544331 0111122222222 2344556888877775554332 334444432110
Q ss_pred -----------eeEEeeccccCCeEEEEECCCCCEEEEEE--CCCeEEEEECCCC-------------------------
Q psy8748 1815 -----------RIHEVAQAHIGDVVSISLSPDGQYFVTGS--VDKSCKLWDFREK------------------------- 1856 (2004)
Q Consensus 1815 -----------~i~~il~~h~~~ItsLafSPdg~~LaSGS--~DGsIrIWDlrs~------------------------- 1856 (2004)
....+..++ .....++|+|....|+++. .++.=.|.-+..+
T Consensus 161 ~dnP~~~~~~~~~~i~A~Gl-RN~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~~~~ 239 (331)
T PF07995_consen 161 ADNPFVGDDGADSEIYAYGL-RNPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDAPSC 239 (331)
T ss_dssp TTSTTTTSTTSTTTEEEE---SEEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTGSS-
T ss_pred CCCccccCCCceEEEEEeCC-CccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCccccccCC
Confidence 000111122 2346789999833344433 2222112111111
Q ss_pred ----eEEEEEecCCCCeEEEEEeC-------CCCEEEEEECCCeEEEEEccCCceeEEE--cCCCCCCCeEEEEEcCCCC
Q psy8748 1857 ----KCVQTFFGHEADVNSVCFHP-------SGLAFATGSEDKTARLFDIRADQQIATY--LPPNKNSGFTSCAVSSSGR 1923 (2004)
Q Consensus 1857 ----k~I~tl~~h~s~ItsIafSP-------dg~~LaSgS~DGtIrIWDLrtgk~i~t~--~~~~~~s~ItsLafSPdG~ 1923 (2004)
.++..+. +...+..+.|.. .|.+|++.-..+.|....+..+..+... ........+..+++.|||.
T Consensus 240 ~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~ 318 (331)
T PF07995_consen 240 PGFVPPVFAYP-PHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGA 318 (331)
T ss_dssp TTS---SEEET-TT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSE
T ss_pred CCcCccceeec-CccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCe
Confidence 1222232 335566777764 3456666655678888888755433221 1133334789999999999
Q ss_pred EEEEEeCCCeEE
Q psy8748 1924 YIFCGSDDNNVH 1935 (2004)
Q Consensus 1924 ~LaSGSsDGsIr 1935 (2004)
+.++-+.+|.|+
T Consensus 319 Lyv~~d~~G~iy 330 (331)
T PF07995_consen 319 LYVSDDSDGKIY 330 (331)
T ss_dssp EEEEE-TTTTEE
T ss_pred EEEEECCCCeEe
Confidence 888888888774
No 399
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=94.37 E-value=22 Score=45.83 Aligned_cols=272 Identities=13% Similarity=0.042 Sum_probs=146.1
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceE----EEeeCCCCceEEEEEec-----CCCEEEEeecCCeEEEEEcCCCCCC---C
Q psy8748 1703 DSRHCVSGSLDGKLIIWDTWTGNKT----QVIPLRSAWVMSVAFAQ-----SGNFVACGGMDNMCTVYDLNNRDST---G 1770 (2004)
Q Consensus 1703 DG~~LASGS~DGtIrVWDl~Tgk~l----~ti~~Ht~~ItsLafSP-----dg~~LaSGS~DGtIrVWDl~t~~~~---~ 1770 (2004)
+...+++|+..|.++||+...+... ..-..-..+|..+..-. +...|++ -.-..+.+|.+...... +
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaV-LhP~kl~vY~v~~~~g~~~~g 114 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAV-LHPRKLSVYSVSLVDGTVEHG 114 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEE-ecCCEEEEEEEEecCCCcccC
Confidence 3458999999999999998554311 11122456788877642 2234444 44567888888432211 1
Q ss_pred cceEEEEEecCccc--e---eeeEEe--C-CCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEE
Q psy8748 1771 AAKVIRELLGYEGF--L---SSCRFI--D-DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTG 1842 (2004)
Q Consensus 1771 ~~k~i~sl~gh~~~--V---ssvafs--d-d~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSG 1842 (2004)
..-.......|.-. . ..-.|. . ...+.+-+.||.+.+|+-+.-... ..+.. .--...+++.+....|+++
T Consensus 115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~-~~lp~-~llPgPl~Y~~~tDsfvt~ 192 (418)
T PF14727_consen 115 NQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFS-RFLPD-FLLPGPLCYCPRTDSFVTA 192 (418)
T ss_pred cEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEE-EEcCC-CCCCcCeEEeecCCEEEEe
Confidence 11112222222211 1 111222 1 345888999999999997654322 22111 2223457788888889999
Q ss_pred ECCCeEEEEECCCC--------------------e---EEEEEecCCCCeEEEEE---eCCCCEEEEEECCCeEEEEEcc
Q psy8748 1843 SVDKSCKLWDFREK--------------------K---CVQTFFGHEADVNSVCF---HPSGLAFATGSEDKTARLFDIR 1896 (2004)
Q Consensus 1843 S~DGsIrIWDlrs~--------------------k---~I~tl~~h~s~ItsIaf---SPdg~~LaSgS~DGtIrIWDLr 1896 (2004)
+.+..+..|....- + +-.++ .-...+..|.. +.....+++-+ ..++.+.+-
T Consensus 193 sss~~l~~Yky~~La~~s~~~~~~~~~~~~~~~~k~l~~dWs~-nlGE~~l~i~v~~~~~~~~~IvvLg-er~Lf~l~~- 269 (418)
T PF14727_consen 193 SSSWTLECYKYQDLASASEASSRQSGTEQDISSGKKLNPDWSF-NLGEQALDIQVVRFSSSESDIVVLG-ERSLFCLKD- 269 (418)
T ss_pred cCceeEEEecHHHhhhccccccccccccccccccccccceeEE-ECCceeEEEEEEEcCCCCceEEEEe-cceEEEEcC-
Confidence 98888888865310 0 01111 11233333333 22333344443 445666664
Q ss_pred CCceeEEEcCCCCCCCeEEEEEc----CCC---CEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEE---cCCCCE
Q psy8748 1897 ADQQIATYLPPNKNSGFTSCAVS----SSG---RYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISL---SPNGMA 1966 (2004)
Q Consensus 1897 tgk~i~t~~~~~~~s~ItsLafS----PdG---~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaF---SPDg~~ 1966 (2004)
+|........... +...+.|. .++ ..+++++.++++.||. ..+.+...+....+| ++.. ..-...
T Consensus 270 ~G~l~~~krLd~~--p~~~~~Y~~~~~~~~~~~~~llV~t~t~~LlVy~--d~~L~WsA~l~~~PV-al~v~~~~~~~G~ 344 (418)
T PF14727_consen 270 NGSLRFQKRLDYN--PSCFCPYRVPWYNEPSTRLNLLVGTHTGTLLVYE--DTTLVWSAQLPHVPV-ALSVANFNGLKGL 344 (418)
T ss_pred CCeEEEEEecCCc--eeeEEEEEeecccCCCCceEEEEEecCCeEEEEe--CCeEEEecCCCCCCE-EEEecccCCCCce
Confidence 3444433332221 12222221 122 2588899999999997 344444444333333 3333 334557
Q ss_pred EEEEECCCeEEEEECCCCe
Q psy8748 1967 LVTSSWDQFVKVWQESNTI 1985 (2004)
Q Consensus 1967 LaSgS~DGtIrIWdlstg~ 1985 (2004)
|++-+.+|.+.+-=+.+.-
T Consensus 345 IV~Ls~~G~L~v~YLGTdP 363 (418)
T PF14727_consen 345 IVSLSDEGQLSVSYLGTDP 363 (418)
T ss_pred EEEEcCCCcEEEEEeCCCC
Confidence 8889999999998877653
No 400
>KOG2079|consensus
Probab=94.31 E-value=0.49 Score=64.19 Aligned_cols=99 Identities=17% Similarity=0.341 Sum_probs=75.5
Q ss_pred cEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEE
Q psy8748 1795 TLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCF 1874 (2004)
Q Consensus 1795 ~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIaf 1874 (2004)
.+++|+..|.+-..|+...-.....-....++|++++|+.+|..++.|-.+|.|.+||...++..+.+..|..+.+++-+
T Consensus 101 ~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~ 180 (1206)
T KOG2079|consen 101 PIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIF 180 (1206)
T ss_pred eEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEE
Confidence 46778888888888876542211222345678999999999999999999999999999999999988887777666544
Q ss_pred ---eCCCCEEEEEECCCeEEEEEc
Q psy8748 1875 ---HPSGLAFATGSEDKTARLFDI 1895 (2004)
Q Consensus 1875 ---SPdg~~LaSgS~DGtIrIWDL 1895 (2004)
..++..++++...|. +|.+
T Consensus 181 v~~t~~nS~llt~D~~Gs--f~~l 202 (1206)
T KOG2079|consen 181 VGRTSQNSKLLTSDTGGS--FWKL 202 (1206)
T ss_pred EEEeCCCcEEEEccCCCc--eEEE
Confidence 445667888877776 5654
No 401
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=94.12 E-value=19 Score=44.14 Aligned_cols=225 Identities=15% Similarity=0.190 Sum_probs=130.5
Q ss_pred eEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCC-cceEEEEEec-----CccceeeeEEeCC-------------CcEE
Q psy8748 1737 VMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTG-AAKVIRELLG-----YEGFLSSCRFIDD-------------TTLL 1797 (2004)
Q Consensus 1737 ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~-~~k~i~sl~g-----h~~~Vssvafsdd-------------~~Ll 1797 (2004)
-+.|+++|.+.+.++....+...+||........ .......+.. .....+.+.|... ..++
T Consensus 25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fi 104 (336)
T TIGR03118 25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFL 104 (336)
T ss_pred cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEE
Confidence 4688999999999988888999999986221111 1122223321 1234556666522 2368
Q ss_pred EeecCCeEEEEECCCCce----eEEeec-cccCCe-EEEEECC--CCCEEEEE-ECCCeEEEEECCCCeEEE--EEecC-
Q psy8748 1798 TGSGDMKIVTWNLETGQR----IHEVAQ-AHIGDV-VSISLSP--DGQYFVTG-SVDKSCKLWDFREKKCVQ--TFFGH- 1865 (2004)
Q Consensus 1798 SgS~DGtI~IWDl~tg~~----i~~il~-~h~~~I-tsLafSP--dg~~LaSG-S~DGsIrIWDlrs~k~I~--tl~~h- 1865 (2004)
.+++||+|.-|...-+.. ...... ...+.| ..+++.. .+.+|+.+ -..|+|.+||-.-.+... .+...
T Consensus 105 f~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~DP~ 184 (336)
T TIGR03118 105 FVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFIDPA 184 (336)
T ss_pred EEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccCCC
Confidence 899999999998643322 111111 112333 3455543 34555544 467889999854322110 01000
Q ss_pred ---C-CC--e---------EEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcC------CCCE
Q psy8748 1866 ---E-AD--V---------NSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSS------SGRY 1924 (2004)
Q Consensus 1866 ---~-s~--I---------tsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSP------dG~~ 1924 (2004)
. .+ | +-..-.+++..=+.|..-|.|-+||.. ++.++++.....-..-+.++..| .|.+
T Consensus 185 iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~FG~~sg~l 263 (336)
T TIGR03118 185 LPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPESFGSLSGAL 263 (336)
T ss_pred CCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeChhhhCCCCCCe
Confidence 0 00 1 111111222222233345789999986 77888886555555566777766 4666
Q ss_pred EEEEeCCCeEEEEECCCCeeeEEEccCCC------CeEEEEEcC
Q psy8748 1925 IFCGSDDNNVHVWDLLKTTHNGVLSGHEN------RVTSISLSP 1962 (2004)
Q Consensus 1925 LaSGSsDGsIrIWDL~tge~l~tL~gHs~------~VtsLaFSP 1962 (2004)
|+---.||+|..||..+++.+..+....+ .++.++|..
T Consensus 264 LVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 264 LVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred EEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence 77666799999999999998888865443 357788864
No 402
>KOG2079|consensus
Probab=94.05 E-value=0.13 Score=69.20 Aligned_cols=103 Identities=20% Similarity=0.313 Sum_probs=79.2
Q ss_pred CCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeE
Q psy8748 1877 SGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVT 1956 (2004)
Q Consensus 1877 dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~Vt 1956 (2004)
.+..++.|+..|.+-..|+...-. .-.......++|++++|+.+|+.++.|-.+|.|.+||+..++..+.+..|..+.+
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~nL~-~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t 176 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGNLG-PLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVT 176 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcccc-hhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccc
Confidence 455788899999999999875311 1223345568899999999999999999999999999999999999887777766
Q ss_pred EEEE---cCCCCEEEEEECCCeEEEEECC
Q psy8748 1957 SISL---SPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1957 sLaF---SPDg~~LaSgS~DGtIrIWdls 1982 (2004)
++-+ ..++..+.++..-|. +|++.
T Consensus 177 ~vi~v~~t~~nS~llt~D~~Gs--f~~lv 203 (1206)
T KOG2079|consen 177 GVIFVGRTSQNSKLLTSDTGGS--FWKLV 203 (1206)
T ss_pred eEEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence 5544 456667788777775 66654
No 403
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.98 E-value=5.5 Score=48.28 Aligned_cols=172 Identities=15% Similarity=0.213 Sum_probs=109.4
Q ss_pred ccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCC-CceEEEEEecCCCEEEEeecCCeEEEEEcCCC
Q psy8748 1688 LKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRS-AWVMSVAFAQSGNFVACGGMDNMCTVYDLNNR 1766 (2004)
Q Consensus 1688 L~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht-~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~ 1766 (2004)
+.|-+..|.++.|+|+.+.|++..+...-.||=..+|+.+++++... ...-.|.|..+|++.++--.++.+.++.++..
T Consensus 81 i~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~ 160 (316)
T COG3204 81 ILGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDAD 160 (316)
T ss_pred cccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCC
Confidence 34555669999999999999998888888888888999999886421 22456788878888887777888888777543
Q ss_pred CCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCC
Q psy8748 1767 DSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDK 1846 (2004)
Q Consensus 1767 ~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DG 1846 (2004)
....... +-.|.+ ............++|+|.+..|+++-+..
T Consensus 161 t~~~~~~----------------------------~~~i~L----------~~~~k~N~GfEGlA~d~~~~~l~~aKEr~ 202 (316)
T COG3204 161 TTVISAK----------------------------VQKIPL----------GTTNKKNKGFEGLAWDPVDHRLFVAKERN 202 (316)
T ss_pred ccEEecc----------------------------ceEEec----------cccCCCCcCceeeecCCCCceEEEEEccC
Confidence 1000000 000110 00011134567889999888888888777
Q ss_pred eEEEEECCCCeE---EEEEecC-------CCCeEEEEEeC-CCCEEEEEECCCeEEEEEccC
Q psy8748 1847 SCKLWDFREKKC---VQTFFGH-------EADVNSVCFHP-SGLAFATGSEDKTARLFDIRA 1897 (2004)
Q Consensus 1847 sIrIWDlrs~k~---I~tl~~h-------~s~ItsIafSP-dg~~LaSgS~DGtIrIWDLrt 1897 (2004)
-+.||....... +.....+ -..|.++.|++ .+..++-+.+++.+.-.|...
T Consensus 203 P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G 264 (316)
T COG3204 203 PIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFNAITNSLLVLSDESRRLLEVDLSG 264 (316)
T ss_pred CcEEEEEecCCcccccccccCcccccceEeeccccceecCCCCcEEEEecCCceEEEEecCC
Confidence 777776653321 1111111 12466778887 455566666777777777653
No 404
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=93.93 E-value=26 Score=44.99 Aligned_cols=148 Identities=9% Similarity=0.045 Sum_probs=83.8
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCc-----ee
Q psy8748 1827 VVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQ-----QI 1901 (2004)
Q Consensus 1827 ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk-----~i 1901 (2004)
...+...+++.+++++.....++-||-....-...-......+.++.+.+++..++++ .+|.+.. ....+. ..
T Consensus 241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~~f 318 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDFDF 318 (398)
T ss_pred eeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceEEE-ecCCCCcccccce
Confidence 4445667788777776544333344432211011222345678899999999877766 4665443 333343 12
Q ss_pred EEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEc---cCCCCeEEEEEcCCCCEEEEEECCCeEEE
Q psy8748 1902 ATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLS---GHENRVTSISLSPNGMALVTSSWDQFVKV 1978 (2004)
Q Consensus 1902 ~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~---gHs~~VtsLaFSPDg~~LaSgS~DGtIrI 1978 (2004)
...........+..+.+.+++..+++| ..|.+.... ..|+.-.... .-......+.|.++++.+++ |.+|.|.-
T Consensus 319 ~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~-G~~G~il~ 395 (398)
T PLN00033 319 EEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVL-GNDGVLLR 395 (398)
T ss_pred eecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEE-eCCcEEEE
Confidence 222212223458889999888776665 677666553 3443322222 23456889999877665554 55787655
Q ss_pred E
Q psy8748 1979 W 1979 (2004)
Q Consensus 1979 W 1979 (2004)
|
T Consensus 396 ~ 396 (398)
T PLN00033 396 Y 396 (398)
T ss_pred e
Confidence 4
No 405
>PRK13684 Ycf48-like protein; Provisional
Probab=93.89 E-value=15 Score=45.81 Aligned_cols=121 Identities=10% Similarity=0.001 Sum_probs=72.6
Q ss_pred CCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee
Q psy8748 1866 EADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHN 1945 (2004)
Q Consensus 1866 ~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l 1945 (2004)
...+.++.+.+++.+++++ ..|.+..- .+.+..............+..+.+.++++.+++| ..|.+++=....+..-
T Consensus 172 ~g~~~~i~~~~~g~~v~~g-~~G~i~~s-~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW 248 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVS-SRGNFYST-WEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESW 248 (334)
T ss_pred cceEEEEEECCCCeEEEEe-CCceEEEE-cCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCcc
Confidence 4568899999988766655 45654432 1222221122223344678899999999987776 5676654333333332
Q ss_pred EEEcc----CCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEE
Q psy8748 1946 GVLSG----HENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLK 1991 (2004)
Q Consensus 1946 ~tL~g----Hs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik 1991 (2004)
..... ....+.++.+.+++..+ .++.+|.|. ...+.++.|+.++
T Consensus 249 ~~~~~~~~~~~~~l~~v~~~~~~~~~-~~G~~G~v~-~S~d~G~tW~~~~ 296 (334)
T PRK13684 249 SKPIIPEITNGYGYLDLAYRTPGEIW-AGGGNGTLL-VSKDGGKTWEKDP 296 (334)
T ss_pred ccccCCccccccceeeEEEcCCCCEE-EEcCCCeEE-EeCCCCCCCeECC
Confidence 22211 22457889999887754 455677554 5677777787654
No 406
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=93.88 E-value=2.9 Score=50.09 Aligned_cols=155 Identities=17% Similarity=0.128 Sum_probs=94.8
Q ss_pred CeEEEEECCCCCEEEEEE---CCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEE-ccCCcee
Q psy8748 1826 DVVSISLSPDGQYFVTGS---VDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFD-IRADQQI 1901 (2004)
Q Consensus 1826 ~ItsLafSPdg~~LaSGS---~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWD-Lrtgk~i 1901 (2004)
.+.+.+++++++.++... ....++++..... ..... ....+..-.|++++...++...++..+++. ...+...
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~~~--~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~ 101 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAGGP--VRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGE 101 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCCCc--ceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcce
Confidence 688999999999877665 3334666654332 22221 233777889999987766666666666663 3333332
Q ss_pred E-EEcCCCCCCCeEEEEEcCCCCEEEEEe---CCCeEEEEECC---CC------eeeEEEccCCCCeEEEEEcCCCCEEE
Q psy8748 1902 A-TYLPPNKNSGFTSCAVSSSGRYIFCGS---DDNNVHVWDLL---KT------THNGVLSGHENRVTSISLSPNGMALV 1968 (2004)
Q Consensus 1902 ~-t~~~~~~~s~ItsLafSPdG~~LaSGS---sDGsIrIWDL~---tg------e~l~tL~gHs~~VtsLaFSPDg~~La 1968 (2004)
. ..........|+.+.++|||..++... .++.|.+--+. .+ ............+++++|.+++.+++
T Consensus 102 ~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~V 181 (253)
T PF10647_consen 102 PVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLVV 181 (253)
T ss_pred eEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEEE
Confidence 2 222222222799999999999888765 35777776543 22 11122223356899999999998877
Q ss_pred EEECCC-eEEE-EECCC
Q psy8748 1969 TSSWDQ-FVKV-WQESN 1983 (2004)
Q Consensus 1969 SgS~DG-tIrI-Wdlst 1983 (2004)
.+...+ .+.. .....
T Consensus 182 ~~~~~~~~~~~~v~~dG 198 (253)
T PF10647_consen 182 LGRSAGGPVVRLVSVDG 198 (253)
T ss_pred EeCCCCCceeEEEEccC
Confidence 765543 2333 44443
No 407
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.81 E-value=1.8 Score=51.81 Aligned_cols=163 Identities=17% Similarity=0.186 Sum_probs=102.9
Q ss_pred EECCCCCEEEEEECC-----CeEEEEECCCC-eEEEEEecCCCCeEEEEEeCCCCEEEEEEC------------------
Q psy8748 1831 SLSPDGQYFVTGSVD-----KSCKLWDFREK-KCVQTFFGHEADVNSVCFHPSGLAFATGSE------------------ 1886 (2004)
Q Consensus 1831 afSPdg~~LaSGS~D-----GsIrIWDlrs~-k~I~tl~~h~s~ItsIafSPdg~~LaSgS~------------------ 1886 (2004)
.|+|||.+|+..-.| |.|-|||.+.+ +.+..+..|.-....+.|.+||+.++.+..
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsM 199 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSM 199 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhc
Confidence 689999999886544 68999999854 446677788888889999999999887642
Q ss_pred CCeEEEEEccCCceeEEEcCC--CCCCCeEEEEEcCCCCEEEEEeCCCe-----EEEEECCCCeeeEEEcc-------CC
Q psy8748 1887 DKTARLFDIRADQQIATYLPP--NKNSGFTSCAVSSSGRYIFCGSDDNN-----VHVWDLLKTTHNGVLSG-------HE 1952 (2004)
Q Consensus 1887 DGtIrIWDLrtgk~i~t~~~~--~~~s~ItsLafSPdG~~LaSGSsDGs-----IrIWDL~tge~l~tL~g-------Hs 1952 (2004)
.-.+.+.|..+|..+.+...+ .+.-.+..++..+||..++.+-..|. -.+=-...++.+.-+.. -.
T Consensus 200 ePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~a 279 (366)
T COG3490 200 EPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFA 279 (366)
T ss_pred CccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHH
Confidence 012344454555555544433 34456778888888877665543331 11111223444433321 23
Q ss_pred CCeEEEEEcCCCCEEEEEE-CCCeEEEEECCCCeEEEEEEee
Q psy8748 1953 NRVTSISLSPNGMALVTSS-WDQFVKVWQESNTIVWKVLKVY 1993 (2004)
Q Consensus 1953 ~~VtsLaFSPDg~~LaSgS-~DGtIrIWdlstg~l~k~Ik~~ 1993 (2004)
..|-+|+.+.+..+++..+ ..+...+||..+|.........
T Consensus 280 nYigsiA~n~~~glV~lTSP~GN~~vi~da~tG~vv~~a~l~ 321 (366)
T COG3490 280 NYIGSIAANRRDGLVALTSPRGNRAVIWDAATGAVVSEAALP 321 (366)
T ss_pred hhhhheeecccCCeEEEecCCCCeEEEEEcCCCcEEeccccc
Confidence 4577888876555555444 4556788999999766554433
No 408
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=93.70 E-value=2 Score=45.20 Aligned_cols=100 Identities=13% Similarity=0.214 Sum_probs=68.7
Q ss_pred eEEEEEec-CC---CEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCC
Q psy8748 1737 VMSVAFAQ-SG---NFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLET 1812 (2004)
Q Consensus 1737 ItsLafSP-dg---~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~t 1812 (2004)
|+++++.. ++ +.|++|+.|..|++|+-+. .+... .....+..+.....+.|+.+..+|+|-+|+-..
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e--------~~~Ei-~e~~~v~~L~~~~~~~F~Y~l~NGTVGvY~~~~ 72 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE--------IVAEI-TETDKVTSLCSLGGGRFAYALANGTVGVYDRSQ 72 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc--------EEEEE-ecccceEEEEEcCCCEEEEEecCCEEEEEeCcc
Confidence 66777654 22 5899999999999998542 22332 345667777777788999999999999998643
Q ss_pred CceeEEeeccccCCeEEEEECC-C--C-CEEEEEECCCeEE
Q psy8748 1813 GQRIHEVAQAHIGDVVSISLSP-D--G-QYFVTGSVDKSCK 1849 (2004)
Q Consensus 1813 g~~i~~il~~h~~~ItsLafSP-d--g-~~LaSGS~DGsIr 1849 (2004)
.+.++. .+..++++++.. + | ..|++|-.+|.|-
T Consensus 73 --RlWRiK--SK~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 73 --RLWRIK--SKNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred --eeeeec--cCCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 333332 233466766654 2 2 2688888888764
No 409
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.63 E-value=6.5 Score=47.69 Aligned_cols=164 Identities=15% Similarity=0.188 Sum_probs=113.8
Q ss_pred ccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecC-CCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCc
Q psy8748 1821 QAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGH-EADVNSVCFHPSGLAFATGSEDKTARLFDIRADQ 1899 (2004)
Q Consensus 1821 ~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h-~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk 1899 (2004)
.+....+.++.|+|+.+.|++....+.-.+|=..+|+.++++.-. -...-.|.+..+|.++++--.++.+.++.+..+.
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t 161 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADT 161 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence 344556999999999999988888877777766788888877422 2345567888888888887788888888776553
Q ss_pred eeEEE-------cCCCC-CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee---EEEccCC-------CCeEEEEEc
Q psy8748 1900 QIATY-------LPPNK-NSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHN---GVLSGHE-------NRVTSISLS 1961 (2004)
Q Consensus 1900 ~i~t~-------~~~~~-~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l---~tL~gHs-------~~VtsLaFS 1961 (2004)
..... ....+ +.+.-.++|+|.++.++.+-+-.-+.||.+..+... .....+. ..|.++.|+
T Consensus 162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~~~~~~l~~~~~~~~~~~~~~f~~DvSgl~~~ 241 (316)
T COG3204 162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVTQSPSSLSVHASLDPTADRDLFVLDVSGLEFN 241 (316)
T ss_pred cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEecCCcccccccccCcccccceEeeccccceec
Confidence 22211 11122 567889999999998888888877888776533211 1111121 246778887
Q ss_pred C-CCCEEEEEECCCeEEEEECCCC
Q psy8748 1962 P-NGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1962 P-Dg~~LaSgS~DGtIrIWdlstg 1984 (2004)
+ .+..++-+.+++.+.-.+..++
T Consensus 242 ~~~~~LLVLS~ESr~l~Evd~~G~ 265 (316)
T COG3204 242 AITNSLLVLSDESRRLLEVDLSGE 265 (316)
T ss_pred CCCCcEEEEecCCceEEEEecCCC
Confidence 6 5667777778888888888775
No 410
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.44 E-value=7.8 Score=46.70 Aligned_cols=232 Identities=11% Similarity=0.114 Sum_probs=130.0
Q ss_pred EEEEeCCCC-EEEEEeCCCe-EEEEECCCCceEEEeeCCCCc--eEEEEEecCCCEEEEeecC-----CeEEEEEcCCCC
Q psy8748 1697 SVHYSGDSR-HCVSGSLDGK-LIIWDTWTGNKTQVIPLRSAW--VMSVAFAQSGNFVACGGMD-----NMCTVYDLNNRD 1767 (2004)
Q Consensus 1697 sLaFSPDG~-~LASGS~DGt-IrVWDl~Tgk~l~ti~~Ht~~--ItsLafSPdg~~LaSGS~D-----GtIrVWDl~t~~ 1767 (2004)
.|+|+|... -++.+-.-|+ ..++|..+++...++...++. --.=+|+|||.+|...-.| |.|-|||.+.
T Consensus 72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~-- 149 (366)
T COG3490 72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDARE-- 149 (366)
T ss_pred CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEeccc--
Confidence 677777544 3455544444 578888887766655432211 1122699999999876443 8899999974
Q ss_pred CCCcceEEEEEecCccceeeeEEeCCCcEEEeecCC-------------------eEEEEECCCCceeEEeec---cccC
Q psy8748 1768 STGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDM-------------------KIVTWNLETGQRIHEVAQ---AHIG 1825 (2004)
Q Consensus 1768 ~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DG-------------------tI~IWDl~tg~~i~~il~---~h~~ 1825 (2004)
.+..+..+..|.-....+.+..++..++....| .+.+.|..+|+.+.+... .+.-
T Consensus 150 ---~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l~~l 226 (366)
T COG3490 150 ---GFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASLRQL 226 (366)
T ss_pred ---ccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhhhhc
Confidence 345566667777667777777666644443322 233344444444432211 2334
Q ss_pred CeEEEEECCCCCEEEEEECCCe-----EEEEECCCCeEEEEEe-------cCCCCeEEEEEeCCCCEEEEEE-CCCeEEE
Q psy8748 1826 DVVSISLSPDGQYFVTGSVDKS-----CKLWDFREKKCVQTFF-------GHEADVNSVCFHPSGLAFATGS-EDKTARL 1892 (2004)
Q Consensus 1826 ~ItsLafSPdg~~LaSGS~DGs-----IrIWDlrs~k~I~tl~-------~h~s~ItsIafSPdg~~LaSgS-~DGtIrI 1892 (2004)
.|..++..+||...+.+-..|. --+=-...++.+.-+. .....|-+|+.+.+..+++..+ ..+...+
T Consensus 227 SiRHld~g~dgtvwfgcQy~G~~~d~ppLvg~~~~g~~l~~~~~pee~~~~~anYigsiA~n~~~glV~lTSP~GN~~vi 306 (366)
T COG3490 227 SIRHLDIGRDGTVWFGCQYRGPRNDLPPLVGHFRKGEPLEFLDLPEEQTAAFANYIGSIAANRRDGLVALTSPRGNRAVI 306 (366)
T ss_pred ceeeeeeCCCCcEEEEEEeeCCCccCCcceeeccCCCcCcccCCCHHHHHHHHhhhhheeecccCCeEEEecCCCCeEEE
Confidence 5677777777765444332221 0111112233332221 1223466788876555555544 4556889
Q ss_pred EEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1893 FDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1893 WDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
||..+|..+..-.... ...+ .+...=+++.+.+|.+.++.-
T Consensus 307 ~da~tG~vv~~a~l~d----aaGv--a~~~~gf~vssg~G~~~~~s~ 347 (366)
T COG3490 307 WDAATGAVVSEAALPD----AAGV--AAAKGGFAVSSGQGRIIFYSR 347 (366)
T ss_pred EEcCCCcEEecccccc----cccc--eeccCceEEecCCceEEeccc
Confidence 9999998876653322 1222 233344666677888888753
No 411
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=93.42 E-value=30 Score=44.53 Aligned_cols=197 Identities=13% Similarity=0.138 Sum_probs=98.1
Q ss_pred CcEEEee-cCCeEEEEECCCCc---eeEEeecc-------ccCCeEEEEECCCCCEEEEEE--C----CCeEEEEECCCC
Q psy8748 1794 TTLLTGS-GDMKIVTWNLETGQ---RIHEVAQA-------HIGDVVSISLSPDGQYFVTGS--V----DKSCKLWDFREK 1856 (2004)
Q Consensus 1794 ~~LlSgS-~DGtI~IWDl~tg~---~i~~il~~-------h~~~ItsLafSPdg~~LaSGS--~----DGsIrIWDlrs~ 1856 (2004)
++|++.+ ..+.|+++|..+.- .+.++... .-.....+..-|+|+.++++- . -|.+.++|-++.
T Consensus 88 r~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~tf 167 (461)
T PF05694_consen 88 RYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGETF 167 (461)
T ss_dssp -EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TTT-
T ss_pred CcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCccc
Confidence 3466555 78899999998532 22233221 112233455567888887753 2 246888998887
Q ss_pred eEEEEEecCC---CCeEEEEEeCCCCEEEEEEC--------------------CCeEEEEEccCCceeEEEcCCCCCCCe
Q psy8748 1857 KCVQTFFGHE---ADVNSVCFHPSGLAFATGSE--------------------DKTARLFDIRADQQIATYLPPNKNSGF 1913 (2004)
Q Consensus 1857 k~I~tl~~h~---s~ItsIafSPdg~~LaSgS~--------------------DGtIrIWDLrtgk~i~t~~~~~~~s~I 1913 (2004)
+....+.... ..-..+-|.|..+.+++... ..++.+||+.+.+.++++.........
T Consensus 168 ~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~g~~p 247 (461)
T PF05694_consen 168 EVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEEGQMP 247 (461)
T ss_dssp -EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TTEEEE
T ss_pred cccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCCCCce
Confidence 7777665432 23456778888888887653 347999999999999998765543445
Q ss_pred EEEEEcC--CCCEEEEEeC-CCeEEEEEC-CCCee----eEEEcc-----C------------CCCeEEEEEcCCCCEEE
Q psy8748 1914 TSCAVSS--SGRYIFCGSD-DNNVHVWDL-LKTTH----NGVLSG-----H------------ENRVTSISLSPNGMALV 1968 (2004)
Q Consensus 1914 tsLafSP--dG~~LaSGSs-DGsIrIWDL-~tge~----l~tL~g-----H------------s~~VtsLaFSPDg~~La 1968 (2004)
..+.|.. +..+=++|+. .++|..|-- ..++- +..+.. - ..-|++|.+|.|.++|.
T Consensus 248 LEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDDrfLY 327 (461)
T PF05694_consen 248 LEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDDRFLY 327 (461)
T ss_dssp EEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS-EEE
T ss_pred EEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCCCEEE
Confidence 5666654 4555444433 444544432 33321 112211 0 23479999999999998
Q ss_pred EEEC-CCeEEEEECCCCeEEEEE
Q psy8748 1969 TSSW-DQFVKVWQESNTIVWKVL 1990 (2004)
Q Consensus 1969 SgS~-DGtIrIWdlstg~l~k~I 1990 (2004)
.++. +|.|+.||+++...=+..
T Consensus 328 vs~W~~GdvrqYDISDP~~Pkl~ 350 (461)
T PF05694_consen 328 VSNWLHGDVRQYDISDPFNPKLV 350 (461)
T ss_dssp EEETTTTEEEEEE-SSTTS-EEE
T ss_pred EEcccCCcEEEEecCCCCCCcEE
Confidence 7776 899999999876433333
No 412
>KOG2444|consensus
Probab=93.35 E-value=0.098 Score=60.51 Aligned_cols=105 Identities=12% Similarity=0.147 Sum_probs=66.5
Q ss_pred CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEE-EEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCC-CCe
Q psy8748 1792 DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVS-ISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHE-ADV 1869 (2004)
Q Consensus 1792 dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~Its-LafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~-s~I 1869 (2004)
-+..+++|+.+|.|++|+.................|.+ +....++.+.++++.||.|+.|++.-.+.+.....|. .++
T Consensus 69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~ 148 (238)
T KOG2444|consen 69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESG 148 (238)
T ss_pred cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCc
Confidence 34568999999999999987322221221122223333 2333356689999999999999998888777666666 445
Q ss_pred EEEEEeCCCCEEEEE--ECCCeEEEEEcc
Q psy8748 1870 NSVCFHPSGLAFATG--SEDKTARLFDIR 1896 (2004)
Q Consensus 1870 tsIafSPdg~~LaSg--S~DGtIrIWDLr 1896 (2004)
.....+..+..+..+ |.|..++.|++.
T Consensus 149 e~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 149 EELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred ceeEEecCCceEEeeccccchhhhhcchh
Confidence 444444555555555 556666666654
No 413
>PHA03098 kelch-like protein; Provisional
Probab=93.33 E-value=2.6 Score=55.63 Aligned_cols=189 Identities=12% Similarity=0.138 Sum_probs=90.4
Q ss_pred CCCCEEEEEeCCC------eEEEEECCCCceEEEeeCC--CCceEEEEEecCCCEEEEeecC-----CeEEEEEcCCCCC
Q psy8748 1702 GDSRHCVSGSLDG------KLIIWDTWTGNKTQVIPLR--SAWVMSVAFAQSGNFVACGGMD-----NMCTVYDLNNRDS 1768 (2004)
Q Consensus 1702 PDG~~LASGS~DG------tIrVWDl~Tgk~l~ti~~H--t~~ItsLafSPdg~~LaSGS~D-----GtIrVWDl~t~~~ 1768 (2004)
.++..++.||.++ .+..||..+.+....-... ..... ++ .-++..++.||.+ ..+..||..+..
T Consensus 293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~-~~-~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~- 369 (534)
T PHA03098 293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPG-VT-VFNNRIYVIGGIYNSISLNTVESWKPGESK- 369 (534)
T ss_pred ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccce-EE-EECCEEEEEeCCCCCEecceEEEEcCCCCc-
Confidence 3455666666542 5778887776553321111 11111 22 2357777888865 346677766542
Q ss_pred CCcceEEEEEecCccceeeeEEeCCCcEEEeecC------CeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEE
Q psy8748 1769 TGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGD------MKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTG 1842 (2004)
Q Consensus 1769 ~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~D------GtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSG 1842 (2004)
.......... ..-.+++..++..++.|+.+ ..+..||..+++............-.+++. .++..++.|
T Consensus 370 ---W~~~~~lp~~-r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~-~~~~iyv~G 444 (534)
T PHA03098 370 ---WREEPPLIFP-RYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIY-HDGKIYVIG 444 (534)
T ss_pred ---eeeCCCcCcC-CccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEE-ECCEEEEEC
Confidence 1111111111 11122333455556666632 468889988765432110000111112222 256666666
Q ss_pred ECCC--------eEEEEECCCCeEEEE--EecCCCCeEEEEEeCCCCEEEEEECC-----CeEEEEEccCCce
Q psy8748 1843 SVDK--------SCKLWDFREKKCVQT--FFGHEADVNSVCFHPSGLAFATGSED-----KTARLFDIRADQQ 1900 (2004)
Q Consensus 1843 S~DG--------sIrIWDlrs~k~I~t--l~~h~s~ItsIafSPdg~~LaSgS~D-----GtIrIWDLrtgk~ 1900 (2004)
|.++ .+.+||..+++-... ........ +++. -++..++.|+.+ +.+.+||..+.+-
T Consensus 445 G~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~-~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 515 (534)
T PHA03098 445 GISYIDNIKVYNIVESYNPVTNKWTELSSLNFPRINA-SLCI-FNNKIYVVGGDKYEYYINEIEVYDDKTNTW 515 (534)
T ss_pred CccCCCCCcccceEEEecCCCCceeeCCCCCcccccc-eEEE-ECCEEEEEcCCcCCcccceeEEEeCCCCEE
Confidence 6432 388889876543221 11111111 1222 256667777654 3677888775543
No 414
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=93.20 E-value=24 Score=45.32 Aligned_cols=225 Identities=14% Similarity=0.137 Sum_probs=102.4
Q ss_pred CCCEEEEee-cCCeEEEEEcCCCCCCCcceEEEEEec---Cc--c--ceeeeEEeC-CCcEEEee------cCCeEEEEE
Q psy8748 1745 SGNFVACGG-MDNMCTVYDLNNRDSTGAAKVIRELLG---YE--G--FLSSCRFID-DTTLLTGS------GDMKIVTWN 1809 (2004)
Q Consensus 1745 dg~~LaSGS-~DGtIrVWDl~t~~~~~~~k~i~sl~g---h~--~--~Vssvafsd-d~~LlSgS------~DGtI~IWD 1809 (2004)
+.++|+..+ ..+.|.|.|+.+.. ...+..+.+.. +. + ....+...+ ++.++++- .-|.+.++|
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dP--r~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD 163 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDP--RKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLD 163 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-T--TS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-
T ss_pred cCCcEEeeeeccCcEEEEECCCCC--CCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEc
Confidence 345666665 67899999997532 23334444432 11 1 111122223 44555532 236788888
Q ss_pred CCCCceeEEeecc--ccCCeEEEEECCCCCEEEEEEC--------------------CCeEEEEECCCCeEEEEEecCCC
Q psy8748 1810 LETGQRIHEVAQA--HIGDVVSISLSPDGQYFVTGSV--------------------DKSCKLWDFREKKCVQTFFGHEA 1867 (2004)
Q Consensus 1810 l~tg~~i~~il~~--h~~~ItsLafSPdg~~LaSGS~--------------------DGsIrIWDlrs~k~I~tl~~h~s 1867 (2004)
-++.+........ ....-..+-|.|..+.+++... ..++.+||+.+.+.++++.-...
T Consensus 164 ~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~ 243 (461)
T PF05694_consen 164 GETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEE 243 (461)
T ss_dssp TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TT
T ss_pred CccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCC
Confidence 8877665444222 2233456778888888887643 24799999999999998864332
Q ss_pred --CeEEEEEeC--CCCE-EEEEECCCeEEEEEc-cCCce----eEEEcCCC---C------------CCCeEEEEEcCCC
Q psy8748 1868 --DVNSVCFHP--SGLA-FATGSEDKTARLFDI-RADQQ----IATYLPPN---K------------NSGFTSCAVSSSG 1922 (2004)
Q Consensus 1868 --~ItsIafSP--dg~~-LaSgS~DGtIrIWDL-rtgk~----i~t~~~~~---~------------~s~ItsLafSPdG 1922 (2004)
....+.|.. +..+ |+.+.-.++|..|-- ..++- +..+.... . ..-++.+.+|.|.
T Consensus 244 g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitDI~iSlDD 323 (461)
T PF05694_consen 244 GQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITDILISLDD 323 (461)
T ss_dssp EEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------EEE-TTS
T ss_pred CCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEeEEEccCC
Confidence 345666654 4444 333334455555543 33321 12221110 0 2347899999999
Q ss_pred CEEEEEeC-CCeEEEEECCCCe---eeEEEc-c---------------CCCCeEEEEEcCCCCEEEEEE
Q psy8748 1923 RYIFCGSD-DNNVHVWDLLKTT---HNGVLS-G---------------HENRVTSISLSPNGMALVTSS 1971 (2004)
Q Consensus 1923 ~~LaSGSs-DGsIrIWDL~tge---~l~tL~-g---------------Hs~~VtsLaFSPDg~~LaSgS 1971 (2004)
++|++.+. +|.|+.||+.... ....+. + -.+...-+..|-||+.|+..+
T Consensus 324 rfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPqMvqlS~DGkRlYvTn 392 (461)
T PF05694_consen 324 RFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQMVQLSLDGKRLYVTN 392 (461)
T ss_dssp -EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S----EEE-TTSSEEEEE-
T ss_pred CEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCCeEEEccCCeEEEEEe
Confidence 99988775 8999999996532 232221 1 012235677888999887764
No 415
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=93.10 E-value=20 Score=43.58 Aligned_cols=195 Identities=12% Similarity=0.161 Sum_probs=114.8
Q ss_pred CceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCc
Q psy8748 1735 AWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQ 1814 (2004)
Q Consensus 1735 ~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~ 1814 (2004)
+-+..+.++ +++...+..+.-+++.|+.+..... . ....... ...-+....++...++..+..+.++|+.+.+
T Consensus 87 ~l~~Dv~vs--e~yvyvad~ssGL~IvDIS~P~sP~---~-~~~lnt~-gyaygv~vsGn~aYVadlddgfLivdvsdps 159 (370)
T COG5276 87 DLFADVRVS--EEYVYVADWSSGLRIVDISTPDSPT---L-IGFLNTD-GYAYGVYVSGNYAYVADLDDGFLIVDVSDPS 159 (370)
T ss_pred hhhheeEec--ccEEEEEcCCCceEEEeccCCCCcc---e-eccccCC-ceEEEEEecCCEEEEeeccCcEEEEECCCCC
Confidence 446667776 6777777778889999998764221 1 1111112 2333334467777888767777788987665
Q ss_pred eeEE--eeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeE---EEEEecCCCCeEEEEEeCCCCEEEEEECCCe
Q psy8748 1815 RIHE--VAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKC---VQTFFGHEADVNSVCFHPSGLAFATGSEDKT 1889 (2004)
Q Consensus 1815 ~i~~--il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~---I~tl~~h~s~ItsIafSPdg~~LaSgS~DGt 1889 (2004)
...- ......+.-..++.+ |++-+.+..|+-+.+.|+..... +... .....+.++..+++.-+++.. +.-
T Consensus 160 sP~lagrya~~~~d~~~v~IS--Gn~AYvA~~d~GL~ivDVSnp~sPvli~~~-n~g~g~~sv~vsdnr~y~vvy--~eg 234 (370)
T COG5276 160 SPQLAGRYALPGGDTHDVAIS--GNYAYVAWRDGGLTIVDVSNPHSPVLIGSY-NTGPGTYSVSVSDNRAYLVVY--DEG 234 (370)
T ss_pred CceeeeeeccCCCCceeEEEe--cCeEEEEEeCCCeEEEEccCCCCCeEEEEE-ecCCceEEEEecCCeeEEEEc--ccc
Confidence 4321 122233344566665 78888888999999999876532 2222 223367777777765555544 445
Q ss_pred EEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy8748 1890 ARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLK 1941 (2004)
Q Consensus 1890 IrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~t 1941 (2004)
+.+-|..+.+....+..-.....+..-.+.-.|++......+.-+.+.|+.+
T Consensus 235 vlivd~s~~ssp~~~gsyet~~p~~~s~v~Vs~~~~Yvadga~gl~~idisn 286 (370)
T COG5276 235 VLIVDVSGPSSPTVFGSYETSNPVSISTVPVSGEYAYVADGAKGLPIIDISN 286 (370)
T ss_pred eEEEecCCCCCceEeeccccCCcccccceecccceeeeeccccCceeEeccC
Confidence 7788877766555443222222221112333466666666666666666644
No 416
>KOG4499|consensus
Probab=92.37 E-value=8 Score=45.46 Aligned_cols=135 Identities=13% Similarity=0.156 Sum_probs=83.2
Q ss_pred CCeEEEEECCCCCEEEEEEC-C---------CeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEE-EECCCeEEEE
Q psy8748 1825 GDVVSISLSPDGQYFVTGSV-D---------KSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFAT-GSEDKTARLF 1893 (2004)
Q Consensus 1825 ~~ItsLafSPdg~~LaSGS~-D---------GsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaS-gS~DGtIrIW 1893 (2004)
.....-..+|+|+++ .|.. | |.++.|-.. ..+..+...-.--+.++|+.+.+.++. -+.+-.|.-|
T Consensus 109 nR~NDgkvdP~Gryy-~GtMad~~~~le~~~g~Ly~~~~~--h~v~~i~~~v~IsNgl~Wd~d~K~fY~iDsln~~V~a~ 185 (310)
T KOG4499|consen 109 NRLNDGKVDPDGRYY-GGTMADFGDDLEPIGGELYSWLAG--HQVELIWNCVGISNGLAWDSDAKKFYYIDSLNYEVDAY 185 (310)
T ss_pred cccccCccCCCCcee-eeeeccccccccccccEEEEeccC--CCceeeehhccCCccccccccCcEEEEEccCceEEeee
Confidence 345566788999984 4432 1 334444321 112222222233457889887766554 4445667667
Q ss_pred E--ccCCce-----eEEEcCC-C-CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcC
Q psy8748 1894 D--IRADQQ-----IATYLPP-N-KNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSP 1962 (2004)
Q Consensus 1894 D--Lrtgk~-----i~t~~~~-~-~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSP 1962 (2004)
| ..+|.. +..+... . ....--.++++.+|++.++.-..|+|...|..+|+.+..++-....|++++|-.
T Consensus 186 dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 186 DYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred ecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence 7 444432 2222110 0 011122345677899999988999999999999999999998899999999953
No 417
>PHA02790 Kelch-like protein; Provisional
Probab=92.14 E-value=4.8 Score=52.62 Aligned_cols=175 Identities=13% Similarity=0.135 Sum_probs=85.5
Q ss_pred eEEEEECCCCceeEEee-ccccCCeEEEEECCCCCEEEEEECC--CeEEEEECCCCeEEEEEecCCCCeE-EEEEeCCCC
Q psy8748 1804 KIVTWNLETGQRIHEVA-QAHIGDVVSISLSPDGQYFVTGSVD--KSCKLWDFREKKCVQTFFGHEADVN-SVCFHPSGL 1879 (2004)
Q Consensus 1804 tI~IWDl~tg~~i~~il-~~h~~~ItsLafSPdg~~LaSGS~D--GsIrIWDlrs~k~I~tl~~h~s~It-sIafSPdg~ 1879 (2004)
.+..||..++....... .........+. -++...++||.+ ..+..||..+++-.. ......+.. .....-+|+
T Consensus 288 ~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~--~~~~iYviGG~~~~~sve~ydp~~n~W~~-~~~l~~~r~~~~~~~~~g~ 364 (480)
T PHA02790 288 NAIAVNYISNNWIPIPPMNSPRLYASGVP--ANNKLYVVGGLPNPTSVERWFHGDAAWVN-MPSLLKPRCNPAVASINNV 364 (480)
T ss_pred eEEEEECCCCEEEECCCCCchhhcceEEE--ECCEEEEECCcCCCCceEEEECCCCeEEE-CCCCCCCCcccEEEEECCE
Confidence 46678877765432110 01111111222 256777777754 357888876553221 111111111 111223677
Q ss_pred EEEEEECCC---eEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeee--EEEccCCCC
Q psy8748 1880 AFATGSEDK---TARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHN--GVLSGHENR 1954 (2004)
Q Consensus 1880 ~LaSgS~DG---tIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l--~tL~gHs~~ 1954 (2004)
..+.||.++ .+..||.++++-...-..+..... ..+..-+|+..+.| |.+.+||..+.+-. ..+......
T Consensus 365 IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~--~~~~~~~~~IYv~G---G~~e~ydp~~~~W~~~~~m~~~r~~ 439 (480)
T PHA02790 365 IYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYK--SCALVFGRRLFLVG---RNAEFYCESSNTWTLIDDPIYPRDN 439 (480)
T ss_pred EEEecCcCCCCccEEEEeCCCCEEEeCCCCCCcccc--ceEEEECCEEEEEC---CceEEecCCCCcEeEcCCCCCCccc
Confidence 777777654 477888776543322111111111 12223456666666 45778887654432 222211122
Q ss_pred eEEEEEcCCCCEEEEEECC-----CeEEEEECCCCeEEEE
Q psy8748 1955 VTSISLSPNGMALVTSSWD-----QFVKVWQESNTIVWKV 1989 (2004)
Q Consensus 1955 VtsLaFSPDg~~LaSgS~D-----GtIrIWdlstg~l~k~ 1989 (2004)
...+. -+|+..+.||.+ ..|..||..+++ |..
T Consensus 440 ~~~~v--~~~~IYviGG~~~~~~~~~ve~Yd~~~~~-W~~ 476 (480)
T PHA02790 440 PELII--VDNKLLLIGGFYRGSYIDTIEVYNNRTYS-WNI 476 (480)
T ss_pred cEEEE--ECCEEEEECCcCCCcccceEEEEECCCCe-EEe
Confidence 22222 267777888764 358888888763 543
No 418
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=91.79 E-value=29 Score=43.82 Aligned_cols=147 Identities=10% Similarity=0.045 Sum_probs=79.4
Q ss_pred CceEEEEEecCCCEEEEee-----------cCC-eEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecC
Q psy8748 1735 AWVMSVAFAQSGNFVACGG-----------MDN-MCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGD 1802 (2004)
Q Consensus 1735 ~~ItsLafSPdg~~LaSGS-----------~DG-tIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~D 1802 (2004)
.....|+|.++|+.+++-. ..+ .|.+++-.++. ........+...-.....+.+.+++ ++++...
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgd--G~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~~~~ 90 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGD--GKYDKSNVFAEELSMVTGLAVAVGG-VYVATPP 90 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCC--CCcceeEEeecCCCCccceeEecCC-EEEeCCC
Confidence 3456789999998777643 123 66666543322 1222223333333455677777777 6665554
Q ss_pred CeEEEEECCCC-----c--eeEEeecc----ccCCeEEEEECCCCCEEEEEECC-------------------CeEEEEE
Q psy8748 1803 MKIVTWNLETG-----Q--RIHEVAQA----HIGDVVSISLSPDGQYFVTGSVD-------------------KSCKLWD 1852 (2004)
Q Consensus 1803 GtI~IWDl~tg-----~--~i~~il~~----h~~~ItsLafSPdg~~LaSGS~D-------------------GsIrIWD 1852 (2004)
...++.|.... + .+..-+.. +......++|.|||.+.++-+.. |.|.-+|
T Consensus 91 ~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~ 170 (367)
T TIGR02604 91 DILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYN 170 (367)
T ss_pred eEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEe
Confidence 43334354321 1 11111111 12347789999999866544421 4466666
Q ss_pred CCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEE
Q psy8748 1853 FREKKCVQTFFGHEADVNSVCFHPSGLAFATGS 1885 (2004)
Q Consensus 1853 lrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS 1885 (2004)
...++.. .+...-.....++|+++|+.+++-.
T Consensus 171 pdg~~~e-~~a~G~rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 171 PDGGKLR-VVAHGFQNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred cCCCeEE-EEecCcCCCccceECCCCCEEEEcc
Confidence 6554432 2222233456899999998877644
No 419
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=91.17 E-value=51 Score=41.55 Aligned_cols=196 Identities=17% Similarity=0.152 Sum_probs=107.4
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCceEEEeeCCC--CceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEe
Q psy8748 1702 GDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRS--AWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELL 1779 (2004)
Q Consensus 1702 PDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht--~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~ 1779 (2004)
-+|+ +..+..||.|.-.|..+++.+.....-. ..+.+-.+..+|+ ++.++.+|.+..+|..++.. .......
T Consensus 67 ~dg~-v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~----~W~~~~~ 140 (370)
T COG1520 67 GDGT-VYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTL----VWSRNVG 140 (370)
T ss_pred eCCe-EEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcE----EEEEecC
Confidence 3444 4445678888888888888765443221 2222222333555 77788888888888765431 2222222
Q ss_pred cCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccc--cCCeEEEEECCCCCEEEEEEC--CCeEEEEECCC
Q psy8748 1780 GYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAH--IGDVVSISLSPDGQYFVTGSV--DKSCKLWDFRE 1855 (2004)
Q Consensus 1780 gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h--~~~ItsLafSPdg~~LaSGS~--DGsIrIWDlrs 1855 (2004)
+. ..........+..++.++.+|.+...|..+|.......... ...+..--. .....++.+.. ++.+.-.|..+
T Consensus 141 ~~-~~~~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~-~~~~~vy~~~~~~~~~~~a~~~~~ 218 (370)
T COG1520 141 GS-PYYASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPA-IASGTVYVGSDGYDGILYALNAED 218 (370)
T ss_pred CC-eEEecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCce-eecceEEEecCCCcceEEEEEccC
Confidence 20 11222222345556666678999999999888765542221 111111111 12334555555 66777778888
Q ss_pred CeEEEEEecCC----CCe--E-EEE---EeCCCCEEEEEECCCeEEEEEccCCceeEEEcC
Q psy8748 1856 KKCVQTFFGHE----ADV--N-SVC---FHPSGLAFATGSEDKTARLFDIRADQQIATYLP 1906 (2004)
Q Consensus 1856 ~k~I~tl~~h~----s~I--t-sIa---fSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~ 1906 (2004)
+......+.+. ..+ . .+. ..-++ .++.++.+|.+...|..+++.+..+..
T Consensus 219 G~~~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~-~~~~~~~~g~~~~l~~~~G~~~W~~~~ 278 (370)
T COG1520 219 GTLKWSQKVSQTIGRTAISTTPAVDGGPVYVDG-GVYAGSYGGKLLCLDADTGELIWSFPA 278 (370)
T ss_pred CcEeeeeeeecccCcccccccccccCceEEECC-cEEEEecCCeEEEEEcCCCceEEEEec
Confidence 87665532111 111 0 110 11122 346677788899999999999988854
No 420
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=90.75 E-value=19 Score=44.88 Aligned_cols=232 Identities=17% Similarity=0.190 Sum_probs=114.7
Q ss_pred eEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEE----EecCccceeeeEEeCC----CcEEEeecC------
Q psy8748 1737 VMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRE----LLGYEGFLSSCRFIDD----TTLLTGSGD------ 1802 (2004)
Q Consensus 1737 ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~s----l~gh~~~Vssvafsdd----~~LlSgS~D------ 1802 (2004)
.++|+|.|+|+.+++ ...|.|++++- .+.. ...+.. ..........+++.++ ..+++....
T Consensus 4 P~~~a~~pdG~l~v~-e~~G~i~~~~~-~g~~---~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~ 78 (331)
T PF07995_consen 4 PRSMAFLPDGRLLVA-ERSGRIWVVDK-DGSL---KTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGG 78 (331)
T ss_dssp EEEEEEETTSCEEEE-ETTTEEEEEET-TTEE---CEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSS
T ss_pred ceEEEEeCCCcEEEE-eCCceEEEEeC-CCcC---cceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCC
Confidence 578999999887665 55999999983 2211 111212 2233445677777763 444443331
Q ss_pred ---CeEEEEECCCC--c-----eeEEeec---cccCCeEEEEECCCCCEEEEEECCC-------------eEEEEECCCC
Q psy8748 1803 ---MKIVTWNLETG--Q-----RIHEVAQ---AHIGDVVSISLSPDGQYFVTGSVDK-------------SCKLWDFREK 1856 (2004)
Q Consensus 1803 ---GtI~IWDl~tg--~-----~i~~il~---~h~~~ItsLafSPdg~~LaSGS~DG-------------sIrIWDlrs~ 1856 (2004)
..|.-|....+ . .+..... ........|.|.|||.+.++.+..+ .|.-.+....
T Consensus 79 ~~~~~v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~~~~~~~~~~~~~~G~ilri~~dG~ 158 (331)
T PF07995_consen 79 DNDNRVVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDGGNDDNAQDPNSLRGKILRIDPDGS 158 (331)
T ss_dssp SEEEEEEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-TTTGGGGCSTTSSTTEEEEEETTSS
T ss_pred CcceeeEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCCCCcccccccccccceEEEecccCc
Confidence 24555554433 1 1111111 1233456799999997666555433 2333332211
Q ss_pred -------------eEEEEEecCCCCeEEEEEeCC-CCEEEEE-ECCCeEEEEEccCCce---------------------
Q psy8748 1857 -------------KCVQTFFGHEADVNSVCFHPS-GLAFATG-SEDKTARLFDIRADQQ--------------------- 1900 (2004)
Q Consensus 1857 -------------k~I~tl~~h~s~ItsIafSPd-g~~LaSg-S~DGtIrIWDLrtgk~--------------------- 1900 (2004)
....--.++. ....++|+|. |.++++= +.++.=.|.-+..+..
T Consensus 159 ~p~dnP~~~~~~~~~~i~A~GlR-N~~~~~~d~~tg~l~~~d~G~~~~dein~i~~G~nYGWP~~~~~~~~~~~~~~~~~ 237 (331)
T PF07995_consen 159 IPADNPFVGDDGADSEIYAYGLR-NPFGLAFDPNTGRLWAADNGPDGWDEINRIEPGGNYGWPYCEGGPKYSGPPIGDAP 237 (331)
T ss_dssp B-TTSTTTTSTTSTTTEEEE--S-EEEEEEEETTTTEEEEEEE-SSSSEEEEEE-TT-B--TTTBSSSCSTTSS-ECTGS
T ss_pred CCCCCccccCCCceEEEEEeCCC-ccccEEEECCCCcEEEEccCCCCCcEEEEeccCCcCCCCCCcCCCCCCCCcccccc
Confidence 0000001222 2457899998 6554432 2222222222221110
Q ss_pred --------eEEEcCCCCCCCeEEEEEcC-------CCCEEEEEeCCCeEEEEECCCCeeeE---E-EccCCCCeEEEEEc
Q psy8748 1901 --------IATYLPPNKNSGFTSCAVSS-------SGRYIFCGSDDNNVHVWDLLKTTHNG---V-LSGHENRVTSISLS 1961 (2004)
Q Consensus 1901 --------i~t~~~~~~~s~ItsLafSP-------dG~~LaSGSsDGsIrIWDL~tge~l~---t-L~gHs~~VtsLaFS 1961 (2004)
...+ .+...+..+.|.. .|.++++.-..+.|....+..+..+. . +.....++.++++.
T Consensus 238 ~~~~~~~P~~~~---~~~~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~ 314 (331)
T PF07995_consen 238 SCPGFVPPVFAY---PPHSAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQG 314 (331)
T ss_dssp S-TTS---SEEE---TTT--EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEE
T ss_pred CCCCcCccceee---cCccccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEc
Confidence 1111 1123455666653 45566666667788888886553322 1 23455589999999
Q ss_pred CCCCEEEEEECCCeEE
Q psy8748 1962 PNGMALVTSSWDQFVK 1977 (2004)
Q Consensus 1962 PDg~~LaSgS~DGtIr 1977 (2004)
|||.+.++.+.+|.|+
T Consensus 315 pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 315 PDGALYVSDDSDGKIY 330 (331)
T ss_dssp TTSEEEEEE-TTTTEE
T ss_pred CCCeEEEEECCCCeEe
Confidence 9999888888888764
No 421
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=90.67 E-value=57 Score=41.27 Aligned_cols=147 Identities=19% Similarity=0.223 Sum_probs=79.4
Q ss_pred cceeEEEEeCCCCEEEEEe-----------CCC-eEEEEECCC--Cc--eEEEeeCCCCceEEEEEecCCCEEEEeecCC
Q psy8748 1693 NKVNSVHYSGDSRHCVSGS-----------LDG-KLIIWDTWT--GN--KTQVIPLRSAWVMSVAFAQSGNFVACGGMDN 1756 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS-----------~DG-tIrVWDl~T--gk--~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DG 1756 (2004)
.....|+|.++|+.+++-. ..+ .|.+++-.+ |+ ....+...-.....+++.+++ .++ +....
T Consensus 14 ~~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV-~~~~~ 91 (367)
T TIGR02604 14 RNPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYV-ATPPD 91 (367)
T ss_pred CCCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEE-eCCCe
Confidence 4567899999999777642 223 788886543 32 233444334456889999888 444 44443
Q ss_pred eEEEEEcCCCCCCC-cceEEEE-Eec----CccceeeeEEeCCCcEEEeec--------------------CCeEEEEEC
Q psy8748 1757 MCTVYDLNNRDSTG-AAKVIRE-LLG----YEGFLSSCRFIDDTTLLTGSG--------------------DMKIVTWNL 1810 (2004)
Q Consensus 1757 tIrVWDl~t~~~~~-~~k~i~s-l~g----h~~~Vssvafsdd~~LlSgS~--------------------DGtI~IWDl 1810 (2004)
..++.+.+...... ..+.+.. +.. +......+.+.+++.|+++.. .|.|.-+|.
T Consensus 92 i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~p 171 (367)
T TIGR02604 92 ILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNP 171 (367)
T ss_pred EEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEec
Confidence 22333443221111 2222222 222 123456677776666554222 145666666
Q ss_pred CCCceeEEeeccccCCeEEEEECCCCCEEEEEE
Q psy8748 1811 ETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGS 1843 (2004)
Q Consensus 1811 ~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS 1843 (2004)
..++.. .+..+ ......++|+++|+++++-.
T Consensus 172 dg~~~e-~~a~G-~rnp~Gl~~d~~G~l~~tdn 202 (367)
T TIGR02604 172 DGGKLR-VVAHG-FQNPYGHSVDSWGDVFFCDN 202 (367)
T ss_pred CCCeEE-EEecC-cCCCccceECCCCCEEEEcc
Confidence 654432 22222 34457899999998876543
No 422
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=90.60 E-value=29 Score=43.97 Aligned_cols=41 Identities=12% Similarity=0.155 Sum_probs=19.3
Q ss_pred eEEEEECCCCceeEEeeccccCCe--EEEEECCCCCEEEEEECC
Q psy8748 1804 KIVTWNLETGQRIHEVAQAHIGDV--VSISLSPDGQYFVTGSVD 1845 (2004)
Q Consensus 1804 tI~IWDl~tg~~i~~il~~h~~~I--tsLafSPdg~~LaSGS~D 1845 (2004)
.+..||..+++..... ....... .+....-+++..+.|+.+
T Consensus 107 ~v~~YD~~~n~W~~~~-~~~p~~~~~~~~~~~~~~~IYv~GG~~ 149 (376)
T PRK14131 107 DVYKYDPKTNSWQKLD-TRSPVGLAGHVAVSLHNGKAYITGGVN 149 (376)
T ss_pred cEEEEeCCCCEEEeCC-CCCCCcccceEEEEeeCCEEEEECCCC
Confidence 4778888776543211 1111111 112221367777777754
No 423
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=90.42 E-value=67 Score=41.63 Aligned_cols=147 Identities=12% Similarity=0.144 Sum_probs=86.4
Q ss_pred CCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEe-----CCCcEEEeecCCeEEEEECCC--Cc----
Q psy8748 1746 GNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI-----DDTTLLTGSGDMKIVTWNLET--GQ---- 1814 (2004)
Q Consensus 1746 g~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafs-----dd~~LlSgS~DGtI~IWDl~t--g~---- 1814 (2004)
...+++|+..|.++||+....+.... ...-......+|-.+... .+...++.-.-..+.+|.+.. |.
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~~~~~--~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g 114 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNEFQPE--DLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHG 114 (418)
T ss_pred ccEEEEeccccEEEEEccCCCCCCCc--cEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccC
Confidence 46899999999999999855432221 111122233455544432 122344445566777777621 11
Q ss_pred --eeEEeeccccC--CeEEEEECC----C-CCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEE
Q psy8748 1815 --RIHEVAQAHIG--DVVSISLSP----D-GQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGS 1885 (2004)
Q Consensus 1815 --~i~~il~~h~~--~ItsLafSP----d-g~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS 1885 (2004)
........|.- ....+++-| . ..++.+-+.||.+.+|+-+.......+.. ---...++|.+....|++++
T Consensus 115 ~~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~s 193 (418)
T PF14727_consen 115 NQYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTAS 193 (418)
T ss_pred cEEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEec
Confidence 11122223322 233344433 2 35788899999999999765543333332 22334577888888899999
Q ss_pred CCCeEEEEEc
Q psy8748 1886 EDKTARLFDI 1895 (2004)
Q Consensus 1886 ~DGtIrIWDL 1895 (2004)
.+..+..|..
T Consensus 194 ss~~l~~Yky 203 (418)
T PF14727_consen 194 SSWTLECYKY 203 (418)
T ss_pred CceeEEEecH
Confidence 8889998875
No 424
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=90.27 E-value=4.7 Score=53.91 Aligned_cols=113 Identities=12% Similarity=0.079 Sum_probs=76.7
Q ss_pred CCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcC--CCCEEEEEeCCCeEEEEECC----
Q psy8748 1867 ADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSS--SGRYIFCGSDDNNVHVWDLL---- 1940 (2004)
Q Consensus 1867 s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSP--dG~~LaSGSsDGsIrIWDL~---- 1940 (2004)
..+.-+.-+.-++..++.+....+.|||.+.+........ .....|..+.|.. +|+.+++.+-.+.|.+|.-.
T Consensus 30 ~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f-~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy 108 (631)
T PF12234_consen 30 SNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESF-SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDY 108 (631)
T ss_pred CCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeee-cCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhh
Confidence 3444555555555555555566799999998876554433 3356788888864 88888888889999988531
Q ss_pred -----CCeeeEEE--ccCC-CCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1941 -----KTTHNGVL--SGHE-NRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1941 -----tge~l~tL--~gHs-~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
...+++.+ ..|+ .+|.+..|.++|..++.+| +.+.|++-.
T Consensus 109 ~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk~ 156 (631)
T PF12234_consen 109 TNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDKW 156 (631)
T ss_pred hcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECCC
Confidence 22333333 3444 6899999999998776665 568888643
No 425
>KOG2280|consensus
Probab=90.13 E-value=11 Score=50.44 Aligned_cols=196 Identities=12% Similarity=0.138 Sum_probs=99.7
Q ss_pred CeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEE-e-eccccCCeEEEEEC
Q psy8748 1756 NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHE-V-AQAHIGDVVSISLS 1833 (2004)
Q Consensus 1756 GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~-i-l~~h~~~ItsLafS 1833 (2004)
-.|+||++.. .......-..+.+..+.|+++..+++...+|++++|++........ + .......|..+.+.
T Consensus 64 ~~I~If~~sG-------~lL~~~~w~~~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f 136 (829)
T KOG2280|consen 64 PYIRIFNISG-------QLLGRILWKHGELIGMGWSDDEELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFF 136 (829)
T ss_pred eeEEEEeccc-------cchHHHHhcCCCeeeecccCCceEEEEeccceEEEeecchhhhcccccccccccCceeEEEEe
Confidence 3467777642 2333333334477788999999999999999999999854322210 1 11223335555554
Q ss_pred CCCCEEEEEECCCeEEEEECCCCeEEEEEec---CCCCeEEEEEeCCCC---EEEEEE-CCCeEEEEEccCCce-eEEEc
Q psy8748 1834 PDGQYFVTGSVDKSCKLWDFREKKCVQTFFG---HEADVNSVCFHPSGL---AFATGS-EDKTARLFDIRADQQ-IATYL 1905 (2004)
Q Consensus 1834 Pdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~---h~s~ItsIafSPdg~---~LaSgS-~DGtIrIWDLrtgk~-i~t~~ 1905 (2004)
.+|- ++-..+|.+.+-.-.......++.. ...+-.|-...+++. .++-.. ..| ..++....... ...+
T Consensus 137 ~~GV--avlt~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~q~~~~- 212 (829)
T KOG2280|consen 137 HNGV--AVLTVSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRVQLHAL- 212 (829)
T ss_pred cCce--EEEecCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceeccccccccc-
Confidence 4553 3333455554443222212222221 111112222222221 111110 001 01111111111 1111
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEc--cCCCCeEEEEEcCCC
Q psy8748 1906 PPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLS--GHENRVTSISLSPNG 1964 (2004)
Q Consensus 1906 ~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~--gHs~~VtsLaFSPDg 1964 (2004)
......+..+.+||++++|+--..+|.|.+-+....+....+. .|. .-..++|+.+.
T Consensus 213 -~~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~-~p~qm~Wcgnd 271 (829)
T KOG2280|consen 213 -SWPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHD-PPKQMAWCGND 271 (829)
T ss_pred -CCCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCC-chHhceeecCC
Confidence 1123568889999999999999999999999887766665554 222 22366665443
No 426
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=90.07 E-value=28 Score=43.24 Aligned_cols=57 Identities=16% Similarity=0.120 Sum_probs=27.7
Q ss_pred eEEeCCCcEEEeecC-----------CeEEEEECCCCceeEEeeccccCCeE--EEEECCCCCEEEEEECC
Q psy8748 1788 CRFIDDTTLLTGSGD-----------MKIVTWNLETGQRIHEVAQAHIGDVV--SISLSPDGQYFVTGSVD 1845 (2004)
Q Consensus 1788 vafsdd~~LlSgS~D-----------GtI~IWDl~tg~~i~~il~~h~~~It--sLafSPdg~~LaSGS~D 1845 (2004)
+...++...+.|+.+ ..+..||..++...... ........ +.+..-+++..+.|+.+
T Consensus 59 ~~~~~~~iYv~GG~~~~~~~~~~~~~~~v~~Yd~~~~~W~~~~-~~~p~~~~~~~~~~~~~g~IYviGG~~ 128 (346)
T TIGR03547 59 AAAIDGKLYVFGGIGKANSEGSPQVFDDVYRYDPKKNSWQKLD-TRSPVGLLGASGFSLHNGQAYFTGGVN 128 (346)
T ss_pred EEEECCEEEEEeCCCCCCCCCcceecccEEEEECCCCEEecCC-CCCCCcccceeEEEEeCCEEEEEcCcC
Confidence 334455566666642 24778888776543211 11111111 11112367777777754
No 427
>PRK05560 DNA gyrase subunit A; Validated
Probab=90.05 E-value=87 Score=43.94 Aligned_cols=256 Identities=10% Similarity=0.009 Sum_probs=129.3
Q ss_pred EeCCCCEEEEEeCCCeEEEEECCCCce-------EE--EeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEc---CCCC
Q psy8748 1700 YSGDSRHCVSGSLDGKLIIWDTWTGNK-------TQ--VIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDL---NNRD 1767 (2004)
Q Consensus 1700 FSPDG~~LASGS~DGtIrVWDl~Tgk~-------l~--ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl---~t~~ 1767 (2004)
+-++...++..+.+|.|+--...+... .. .++ ....+..+........++..+..|.+..... ....
T Consensus 494 lI~~E~v~vllS~~GyIKri~~~~~~~~~~~~~g~~~~klK-e~D~l~~~~~~~t~d~LllfTs~Grv~~l~v~~iP~~~ 572 (805)
T PRK05560 494 LIPEEDVVVTLTHGGYIKRTPLDEYRAQRRGGKGVSGAKTK-EDDFVEHLFVASTHDTLLFFTNRGRVYRLKVYEIPEAS 572 (805)
T ss_pred ccCCCCEEEEEeCCCEEEEcchhhhhhhcccCCCccccccC-CCCeeEEEEEecCCCeEEEEecCCeEEEEEhhhCcCCC
Confidence 345677888889999988776543221 11 112 1234444444555666666677776665544 3222
Q ss_pred CCCcceEE---EEEecCccceeeeEEe---CCCcEEEeecCCeEEEEECCCCc-------eeEEeeccccCCeEEEEECC
Q psy8748 1768 STGAAKVI---RELLGYEGFLSSCRFI---DDTTLLTGSGDMKIVTWNLETGQ-------RIHEVAQAHIGDVVSISLSP 1834 (2004)
Q Consensus 1768 ~~~~~k~i---~sl~gh~~~Vssvafs---dd~~LlSgS~DGtI~IWDl~tg~-------~i~~il~~h~~~ItsLafSP 1834 (2004)
....+..+ ..+......+.++... ++..++..+.+|.++-.+...-. ....+ . ..+.+..+....
T Consensus 573 ~~~~G~~i~~ll~L~~~E~Iv~~i~~~~~~~e~~lvlvTk~GyiKRi~l~~~~~~~r~G~~~ikL-k-e~D~lv~v~~~~ 650 (805)
T PRK05560 573 RTARGRPIVNLLPLEPGEKITAILPVREFDDDKYLFFATKNGTVKKTSLSEFSNIRSNGIIAINL-D-EGDELIGVRLTD 650 (805)
T ss_pred cCCCCeEHHHhcCCCCCceEEEEEeccCCCCCCEEEEEeCCCEEEEEEhHHhhhcccCCceeecc-C-CCCEEEEEEEeC
Confidence 11222222 1222333444455444 45678999999999887664321 11111 1 223444444444
Q ss_pred CCCEEEEEECCCeEEEEECCC---------CeEEEEEecCCCCeEEEE-EeCCCCEEEEEECCCeEEEEEccCC------
Q psy8748 1835 DGQYFVTGSVDKSCKLWDFRE---------KKCVQTFFGHEADVNSVC-FHPSGLAFATGSEDKTARLFDIRAD------ 1898 (2004)
Q Consensus 1835 dg~~LaSGS~DGsIrIWDlrs---------~k~I~tl~~h~s~ItsIa-fSPdg~~LaSgS~DGtIrIWDLrtg------ 1898 (2004)
....++..+..|.+..+.... |.....+. ....|.++. +.+++.+++..+..|.++...+...
T Consensus 651 ~~d~lll~T~~Gr~~r~~~~eIp~~gr~~~Gv~~i~L~-~~E~Vv~~~~v~~~~~~il~vTk~G~iKr~~l~e~~~~~R~ 729 (805)
T PRK05560 651 GDDDILLATKNGKAIRFPESDVRPMGRTARGVRGIKLR-EGDEVVSMDVVREDSQEILTVTENGYGKRTPVSEYRLQGRG 729 (805)
T ss_pred CCCEEEEEECCCcEEEEEhhhcCccCcccCCcccccCC-CCCEEEEEEEEcCCCcEEEEEEeCCeEEEEEHHHhhccCCC
Confidence 455677777788777665432 12222232 223344443 3333346788888898888765321
Q ss_pred -ceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcC
Q psy8748 1899 -QQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSP 1962 (2004)
Q Consensus 1899 -k~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSP 1962 (2004)
+-...+........+..+........++..+.+|.+..++...-. ........|..+.+..
T Consensus 730 ~kG~~~lkl~~~~d~lv~v~~v~~~~~v~i~T~~G~~lrf~~~eI~---~~gR~a~GVk~I~L~~ 791 (805)
T PRK05560 730 GKGVITIKITEKNGKLVGALPVDDDDEIMLITDSGKLIRTRVSEIS---ITGRNTQGVRLIRLDE 791 (805)
T ss_pred CCcEEeeeccCCCCeEEEEEEecCCCeEEEEecCCeEEEEEHHHCC---ccccCCCCeeeEecCC
Confidence 112222111212333333333334456666777877777654321 1112233455565543
No 428
>PHA02790 Kelch-like protein; Provisional
Probab=89.59 E-value=8.5 Score=50.39 Aligned_cols=183 Identities=11% Similarity=0.053 Sum_probs=84.1
Q ss_pred CCEEEEEeCCC-----eEEEEECCCCceEEEeeCCCCce-EEEEEecCCCEEEEeecCC--eEEEEEcCCCCCCCcceEE
Q psy8748 1704 SRHCVSGSLDG-----KLIIWDTWTGNKTQVIPLRSAWV-MSVAFAQSGNFVACGGMDN--MCTVYDLNNRDSTGAAKVI 1775 (2004)
Q Consensus 1704 G~~LASGS~DG-----tIrVWDl~Tgk~l~ti~~Ht~~I-tsLafSPdg~~LaSGS~DG--tIrVWDl~t~~~~~~~k~i 1775 (2004)
+..+++||.++ .+..||..+++....-....... .+++ .-++...+.||.++ .+..|+...+ .....
T Consensus 272 ~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v-~~~~~iYviGG~~~~~sve~ydp~~n----~W~~~ 346 (480)
T PHA02790 272 EVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGV-PANNKLYVVGGLPNPTSVERWFHGDA----AWVNM 346 (480)
T ss_pred CEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEE-EECCEEEEECCcCCCCceEEEECCCC----eEEEC
Confidence 45566676543 46678877665433211111111 1222 23677778887643 4667775432 11221
Q ss_pred EEEecCccceeeeEEeCCCcEEEeecCC---eEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy8748 1776 RELLGYEGFLSSCRFIDDTTLLTGSGDM---KIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWD 1852 (2004)
Q Consensus 1776 ~sl~gh~~~Vssvafsdd~~LlSgS~DG---tI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWD 1852 (2004)
..+.... .-.+++..++...+.|+.++ .+..||..+++............-.+++ .-+|+..+.| |.+.+||
T Consensus 347 ~~l~~~r-~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~-~~~~~IYv~G---G~~e~yd 421 (480)
T PHA02790 347 PSLLKPR-CNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCAL-VFGRRLFLVG---RNAEFYC 421 (480)
T ss_pred CCCCCCC-cccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEE-EECCEEEEEC---CceEEec
Confidence 1111111 11233334555666666543 4778888776543211111111111222 2245555555 4577888
Q ss_pred CCCCeEEE--EEecCCCCeEEEEEeCCCCEEEEEECCC-----eEEEEEccCC
Q psy8748 1853 FREKKCVQ--TFFGHEADVNSVCFHPSGLAFATGSEDK-----TARLFDIRAD 1898 (2004)
Q Consensus 1853 lrs~k~I~--tl~~h~s~ItsIafSPdg~~LaSgS~DG-----tIrIWDLrtg 1898 (2004)
.++++-.. .+....... +++. -+|+..++||.++ .+..||..++
T Consensus 422 p~~~~W~~~~~m~~~r~~~-~~~v-~~~~IYviGG~~~~~~~~~ve~Yd~~~~ 472 (480)
T PHA02790 422 ESSNTWTLIDDPIYPRDNP-ELII-VDNKLLLIGGFYRGSYIDTIEVYNNRTY 472 (480)
T ss_pred CCCCcEeEcCCCCCCcccc-EEEE-ECCEEEEECCcCCCcccceEEEEECCCC
Confidence 87654322 111111112 2222 2566777776542 3555555433
No 429
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=89.30 E-value=35 Score=47.00 Aligned_cols=94 Identities=14% Similarity=0.161 Sum_probs=56.8
Q ss_pred CceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCc
Q psy8748 1735 AWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQ 1814 (2004)
Q Consensus 1735 ~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~ 1814 (2004)
-.|..+.++++|.+++..|..| |.|-.+... ......+.+....+.|-.+. +...
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r-----~g~~~~~~~g~~~i~Crt~~------------------v~~~- 139 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRG-VVVLELPRR-----WGKNGEFEDGKKEINCRTVP------------------VDER- 139 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCc-EEEEEeccc-----cCccccccCCCcceeEEEEE------------------echh-
Confidence 3588899999999999999877 555544321 00011122222223322221 1110
Q ss_pred eeEEeeccccCCeEEEEECCC---CCEEEEEECCCeEEEEECCCC
Q psy8748 1815 RIHEVAQAHIGDVVSISLSPD---GQYFVTGSVDKSCKLWDFREK 1856 (2004)
Q Consensus 1815 ~i~~il~~h~~~ItsLafSPd---g~~LaSGS~DGsIrIWDlrs~ 1856 (2004)
. +.......|..+.|||. +..|++-+.|+++++||+...
T Consensus 140 -~--~~~~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 140 -F--FTSNSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred -h--ccCCCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence 0 11233456888999995 579999999999999999754
No 430
>PLN02153 epithiospecifier protein
Probab=88.29 E-value=34 Score=42.56 Aligned_cols=190 Identities=14% Similarity=0.088 Sum_probs=87.3
Q ss_pred CCCEEEEEeCC-------CeEEEEECCCCceEEEeeCC---CC---ceEEEEEecCCCEEEEeecC-----CeEEEEEcC
Q psy8748 1703 DSRHCVSGSLD-------GKLIIWDTWTGNKTQVIPLR---SA---WVMSVAFAQSGNFVACGGMD-----NMCTVYDLN 1764 (2004)
Q Consensus 1703 DG~~LASGS~D-------GtIrVWDl~Tgk~l~ti~~H---t~---~ItsLafSPdg~~LaSGS~D-----GtIrVWDl~ 1764 (2004)
++..++.||.+ ..+.+||..+.+-...-... .. ....+.+ ++.+++.|+.+ ..+.+||..
T Consensus 32 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 109 (341)
T PLN02153 32 GDKLYSFGGELKPNEHIDKDLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAV--GTKLYIFGGRDEKREFSDFYSYDTV 109 (341)
T ss_pred CCEEEEECCccCCCCceeCcEEEEECCCCEEEEcCccCCCCCCccCceEEEEE--CCEEEEECCCCCCCccCcEEEEECC
Confidence 35566666653 35788888776433211110 10 1111222 46677777754 246677775
Q ss_pred CCCCCCcceEEEEEe----cCccceeeeEEeCCCcEEEeecC-----------CeEEEEECCCCceeEEeecc---ccCC
Q psy8748 1765 NRDSTGAAKVIRELL----GYEGFLSSCRFIDDTTLLTGSGD-----------MKIVTWNLETGQRIHEVAQA---HIGD 1826 (2004)
Q Consensus 1765 t~~~~~~~k~i~sl~----gh~~~Vssvafsdd~~LlSgS~D-----------GtI~IWDl~tg~~i~~il~~---h~~~ 1826 (2004)
+.. ........ .....-.+++..++..++.|+.+ ..+.+||..+.+........ ....
T Consensus 110 t~~----W~~~~~~~~~~~p~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~~~r~ 185 (341)
T PLN02153 110 KNE----WTFLTKLDEEGGPEARTFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRG 185 (341)
T ss_pred CCE----EEEeccCCCCCCCCCceeeEEEEECCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCCCCCC
Confidence 432 22111110 11111222333455556666643 25778898876543211100 0111
Q ss_pred eEEEEECCCCCEEEEEECC-------------CeEEEEECCCCeEEEEEe-c--CCCCeEEEEEeCCCCEEEEEECC---
Q psy8748 1827 VVSISLSPDGQYFVTGSVD-------------KSCKLWDFREKKCVQTFF-G--HEADVNSVCFHPSGLAFATGSED--- 1887 (2004)
Q Consensus 1827 ItsLafSPdg~~LaSGS~D-------------GsIrIWDlrs~k~I~tl~-~--h~s~ItsIafSPdg~~LaSgS~D--- 1887 (2004)
-.+++. -+++.++.|+.+ ..+.+||..+.+-...-. + ........+..-++.+++.|+..
T Consensus 186 ~~~~~~-~~~~iyv~GG~~~~~~~gG~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~GG~~~~~ 264 (341)
T PLN02153 186 GAGFAV-VQGKIWVVYGFATSILPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVWPD 264 (341)
T ss_pred cceEEE-ECCeEEEEeccccccccCCccceecCceEEEEcCCCcEEeccccCCCCCCcceeeeEEECCEEEEECcccCCc
Confidence 112222 245665655432 358889987665332211 0 11111111122356677777742
Q ss_pred -----------CeEEEEEccCCc
Q psy8748 1888 -----------KTARLFDIRADQ 1899 (2004)
Q Consensus 1888 -----------GtIrIWDLrtgk 1899 (2004)
..+..||..+.+
T Consensus 265 ~~~~~~~~~~~n~v~~~d~~~~~ 287 (341)
T PLN02153 265 LKGHLGPGTLSNEGYALDTETLV 287 (341)
T ss_pred cccccccccccccEEEEEcCccE
Confidence 257778876544
No 431
>PRK05560 DNA gyrase subunit A; Validated
Probab=88.11 E-value=1.3e+02 Score=42.47 Aligned_cols=238 Identities=8% Similarity=-0.028 Sum_probs=121.6
Q ss_pred ecCCCEEEEeecCCeEEEEEcCCCCC---CCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEEC---CC----
Q psy8748 1743 AQSGNFVACGGMDNMCTVYDLNNRDS---TGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNL---ET---- 1812 (2004)
Q Consensus 1743 SPdg~~LaSGS~DGtIrVWDl~t~~~---~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl---~t---- 1812 (2004)
-++...++..+.+|.|+--....... .........+.........+.......++..+..|.++.... ..
T Consensus 495 I~~E~v~vllS~~GyIKri~~~~~~~~~~~~~g~~~~klKe~D~l~~~~~~~t~d~LllfTs~Grv~~l~v~~iP~~~~~ 574 (805)
T PRK05560 495 IPEEDVVVTLTHGGYIKRTPLDEYRAQRRGGKGVSGAKTKEDDFVEHLFVASTHDTLLFFTNRGRVYRLKVYEIPEASRT 574 (805)
T ss_pred cCCCCEEEEEeCCCEEEEcchhhhhhhcccCCCccccccCCCCeeEEEEEecCCCeEEEEecCCeEEEEEhhhCcCCCcC
Confidence 34566777778888888776543211 000111111112222233333345566777888888776644 22
Q ss_pred --CceeEEeec-cccCC-eEEEEECC--CCCEEEEEECCCeEEEEECCCC-------eEEEEEecCCCCeEEEEEeCCCC
Q psy8748 1813 --GQRIHEVAQ-AHIGD-VVSISLSP--DGQYFVTGSVDKSCKLWDFREK-------KCVQTFFGHEADVNSVCFHPSGL 1879 (2004)
Q Consensus 1813 --g~~i~~il~-~h~~~-ItsLafSP--dg~~LaSGS~DGsIrIWDlrs~-------k~I~tl~~h~s~ItsIafSPdg~ 1879 (2004)
|..+..... ..... +.++.+.. +...++..+.+|.++-.++... .....+.. .+.+..+.......
T Consensus 575 ~~G~~i~~ll~L~~~E~Iv~~i~~~~~~~e~~lvlvTk~GyiKRi~l~~~~~~~r~G~~~ikLke-~D~lv~v~~~~~~d 653 (805)
T PRK05560 575 ARGRPIVNLLPLEPGEKITAILPVREFDDDKYLFFATKNGTVKKTSLSEFSNIRSNGIIAINLDE-GDELIGVRLTDGDD 653 (805)
T ss_pred CCCeEHHHhcCCCCCceEEEEEeccCCCCCCEEEEEeCCCEEEEEEhHHhhhcccCCceeeccCC-CCEEEEEEEeCCCC
Confidence 121111111 12223 44444442 5678999999999988765432 22223332 34454554455556
Q ss_pred EEEEEECCCeEEEEEccCCcee-------EEEcCCCCCCCeE-EEEEcCCCCEEEEEeCCCeEEEEECCC---------C
Q psy8748 1880 AFATGSEDKTARLFDIRADQQI-------ATYLPPNKNSGFT-SCAVSSSGRYIFCGSDDNNVHVWDLLK---------T 1942 (2004)
Q Consensus 1880 ~LaSgS~DGtIrIWDLrtgk~i-------~t~~~~~~~s~It-sLafSPdG~~LaSGSsDGsIrIWDL~t---------g 1942 (2004)
.++..+..|.+..+....-... ....... ...|. .+.+.+++.+++..+..|.++...+.. |
T Consensus 654 ~lll~T~~Gr~~r~~~~eIp~~gr~~~Gv~~i~L~~-~E~Vv~~~~v~~~~~~il~vTk~G~iKr~~l~e~~~~~R~~kG 732 (805)
T PRK05560 654 DILLATKNGKAIRFPESDVRPMGRTARGVRGIKLRE-GDEVVSMDVVREDSQEILTVTENGYGKRTPVSEYRLQGRGGKG 732 (805)
T ss_pred EEEEEECCCcEEEEEhhhcCccCcccCCcccccCCC-CCEEEEEEEEcCCCcEEEEEEeCCeEEEEEHHHhhccCCCCCc
Confidence 6777778888777765321111 1111111 22333 334444445788888999888876521 1
Q ss_pred eeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1943 THNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1943 e~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
.....+....+.+..+....+...++..+.+|.+..++..
T Consensus 733 ~~~lkl~~~~d~lv~v~~v~~~~~v~i~T~~G~~lrf~~~ 772 (805)
T PRK05560 733 VITIKITEKNGKLVGALPVDDDDEIMLITDSGKLIRTRVS 772 (805)
T ss_pred EEeeeccCCCCeEEEEEEecCCCeEEEEecCCeEEEEEHH
Confidence 2222233333455444433344456666778877777654
No 432
>PLN02153 epithiospecifier protein
Probab=88.06 E-value=42 Score=41.76 Aligned_cols=183 Identities=13% Similarity=0.121 Sum_probs=85.9
Q ss_pred eEEEEECCCCceeEEeeccc-cC----CeEEEEECCCCCEEEEEECC-----CeEEEEECCCCeEEE--EEec---CCCC
Q psy8748 1804 KIVTWNLETGQRIHEVAQAH-IG----DVVSISLSPDGQYFVTGSVD-----KSCKLWDFREKKCVQ--TFFG---HEAD 1868 (2004)
Q Consensus 1804 tI~IWDl~tg~~i~~il~~h-~~----~ItsLafSPdg~~LaSGS~D-----GsIrIWDlrs~k~I~--tl~~---h~s~ 1868 (2004)
.+.+||..+.+......... .. ....+.+ ++++++.|+.+ ..+.+||..+.+-.. .+.. ....
T Consensus 51 ~~~~yd~~~~~W~~~~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~~~~~~~~~~p~~R 128 (341)
T PLN02153 51 DLYVFDFNTHTWSIAPANGDVPRISCLGVRMVAV--GTKLYIFGGRDEKREFSDFYSYDTVKNEWTFLTKLDEEGGPEAR 128 (341)
T ss_pred cEEEEECCCCEEEEcCccCCCCCCccCceEEEEE--CCEEEEECCCCCCCccCcEEEEECCCCEEEEeccCCCCCCCCCc
Confidence 57888887765432111110 00 1122222 45666777653 257888987654321 1110 1111
Q ss_pred eEEEEEeCCCCEEEEEECC-----------CeEEEEEccCCceeEEEcCC---CCCCCeEEEEEcCCCCEEEEEeCC---
Q psy8748 1869 VNSVCFHPSGLAFATGSED-----------KTARLFDIRADQQIATYLPP---NKNSGFTSCAVSSSGRYIFCGSDD--- 1931 (2004)
Q Consensus 1869 ItsIafSPdg~~LaSgS~D-----------GtIrIWDLrtgk~i~t~~~~---~~~s~ItsLafSPdG~~LaSGSsD--- 1931 (2004)
....+..-+++.++.|+.+ ..+.+||..+.+-...-... ........+. -++++++.|+.+
T Consensus 129 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~l~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~ 206 (341)
T PLN02153 129 TFHSMASDENHVYVFGGVSKGGLMKTPERFRTIEAYNIADGKWVQLPDPGENFEKRGGAGFAV--VQGKIWVVYGFATSI 206 (341)
T ss_pred eeeEEEEECCEEEEECCccCCCccCCCcccceEEEEECCCCeEeeCCCCCCCCCCCCcceEEE--ECCeEEEEecccccc
Confidence 1112222355666676653 24778888765432211100 1111112222 356666655432
Q ss_pred ----------CeEEEEECCCCeeeEEEc-c--CCCCeEEEEEcCCCCEEEEEECC--------------CeEEEEECCCC
Q psy8748 1932 ----------NNVHVWDLLKTTHNGVLS-G--HENRVTSISLSPNGMALVTSSWD--------------QFVKVWQESNT 1984 (2004)
Q Consensus 1932 ----------GsIrIWDL~tge~l~tL~-g--Hs~~VtsLaFSPDg~~LaSgS~D--------------GtIrIWdlstg 1984 (2004)
..+.+||..+.+-...-. + ...+...-+..-++.+++.||.. ..|..||..+.
T Consensus 207 ~~gG~~~~~~~~v~~yd~~~~~W~~~~~~g~~P~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~n~v~~~d~~~~ 286 (341)
T PLN02153 207 LPGGKSDYESNAVQFFDPASGKWTEVETTGAKPSARSVFAHAVVGKYIIIFGGEVWPDLKGHLGPGTLSNEGYALDTETL 286 (341)
T ss_pred ccCCccceecCceEEEEcCCCcEEeccccCCCCCCcceeeeEEECCEEEEECcccCCccccccccccccccEEEEEcCcc
Confidence 458889987654332211 0 11111111122256777777752 25778888765
Q ss_pred eEEEEEE
Q psy8748 1985 IVWKVLK 1991 (2004)
Q Consensus 1985 ~l~k~Ik 1991 (2004)
.|..+.
T Consensus 287 -~W~~~~ 292 (341)
T PLN02153 287 -VWEKLG 292 (341)
T ss_pred -EEEecc
Confidence 477664
No 433
>KOG2280|consensus
Probab=88.04 E-value=24 Score=47.52 Aligned_cols=198 Identities=10% Similarity=0.105 Sum_probs=99.4
Q ss_pred CeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCC
Q psy8748 1714 GKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD 1793 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd 1793 (2004)
-.|+|++. +|+.+..+.-..+.+-.+.|+.+ ..|++...+|++.+|++-...... . . .-.......|..+.+..+
T Consensus 64 ~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~-eeLI~v~k~g~v~Vy~~~ge~ie~-~-s-vg~e~~~~~I~ec~~f~~ 138 (829)
T KOG2280|consen 64 PYIRIFNI-SGQLLGRILWKHGELIGMGWSDD-EELICVQKDGTVHVYGLLGEFIES-N-S-VGFESQMSDIVECRFFHN 138 (829)
T ss_pred eeEEEEec-cccchHHHHhcCCCeeeecccCC-ceEEEEeccceEEEeecchhhhcc-c-c-cccccccCceeEEEEecC
Confidence 45888885 67777666555557889999855 456667789999999985431110 0 0 001122233444444444
Q ss_pred CcEEEeecCCeEEEEECCCCceeEEeec--cccCCeEEEEECCCCC---EEEEEE-CCCeEEEEECCCCe-EEEEEecCC
Q psy8748 1794 TTLLTGSGDMKIVTWNLETGQRIHEVAQ--AHIGDVVSISLSPDGQ---YFVTGS-VDKSCKLWDFREKK-CVQTFFGHE 1866 (2004)
Q Consensus 1794 ~~LlSgS~DGtI~IWDl~tg~~i~~il~--~h~~~ItsLafSPdg~---~LaSGS-~DGsIrIWDlrs~k-~I~tl~~h~ 1866 (2004)
+. ++-+.+|.+.+.+-.......+... ...-+-.|-...+++. .++-.. ..| ..++-..... ....+....
T Consensus 139 GV-avlt~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~~~~ll~v~~~v~-~~~~q~~~~~~q~~~~~~~~ 216 (829)
T KOG2280|consen 139 GV-AVLTVSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQSTILLDVDVAVG-LHICQVEESRVQLHALSWPN 216 (829)
T ss_pred ce-EEEecCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCcceeEEeechhhh-hcccceecccccccccCCCC
Confidence 43 3333444444433222111111111 1111112222222211 111111 000 0111111111 112222224
Q ss_pred CCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEc
Q psy8748 1867 ADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVS 1919 (2004)
Q Consensus 1867 s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafS 1919 (2004)
..+..+..+|+.++++--..+|.|.+-+.+..+....+....+..+ ..++|.
T Consensus 217 ~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~~~~~~~~p-~qm~Wc 268 (829)
T KOG2280|consen 217 SSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEFNCTDHDPP-KQMAWC 268 (829)
T ss_pred ceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhccCCCCCCch-Hhceee
Confidence 5678899999999999999999999999887777776654443222 255554
No 434
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=87.92 E-value=1.2 Score=39.99 Aligned_cols=35 Identities=20% Similarity=0.184 Sum_probs=30.8
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeE
Q psy8748 1952 ENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIV 1986 (2004)
Q Consensus 1952 s~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l 1986 (2004)
...|..++|+|...+||.|+.||.|.+|+++..+.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~~qri 45 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRLNWQRI 45 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEECCCcCc
Confidence 45799999999999999999999999999965443
No 435
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=87.89 E-value=37 Score=41.94 Aligned_cols=107 Identities=16% Similarity=0.270 Sum_probs=53.0
Q ss_pred CCCcEEEeecC-----CeEEEEECCCCcee--EEeeccccCCe--EEEEECCCCCEEEEEECC-----CeEEEEECCCCe
Q psy8748 1792 DDTTLLTGSGD-----MKIVTWNLETGQRI--HEVAQAHIGDV--VSISLSPDGQYFVTGSVD-----KSCKLWDFREKK 1857 (2004)
Q Consensus 1792 dd~~LlSgS~D-----GtI~IWDl~tg~~i--~~il~~h~~~I--tsLafSPdg~~LaSGS~D-----GsIrIWDlrs~k 1857 (2004)
++..++.|+.+ ..+..||+.+.... .........+. .+++.. +++..+.|+.. ..+..||..+.+
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~-~~~iYv~GG~~~~~~~~~v~~yd~~~~~ 150 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYK-DGTLYVGGGNRNGKPSNKSYLFNLETQE 150 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEE-CCEEEEEeCcCCCccCceEEEEcCCCCC
Confidence 45556666654 35777787766531 11111111111 122222 46666666642 358888987654
Q ss_pred EEE--EEecCCCCeEEEEEeCCCCEEEEEECCCe----EEEEEccCCce
Q psy8748 1858 CVQ--TFFGHEADVNSVCFHPSGLAFATGSEDKT----ARLFDIRADQQ 1900 (2004)
Q Consensus 1858 ~I~--tl~~h~s~ItsIafSPdg~~LaSgS~DGt----IrIWDLrtgk~ 1900 (2004)
-.. .+.. .......+..-++++.+.|+.++. +.+||..+.+-
T Consensus 151 W~~~~~~p~-~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W 198 (323)
T TIGR03548 151 WFELPDFPG-EPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQW 198 (323)
T ss_pred eeECCCCCC-CCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCee
Confidence 322 1211 111222223345667777776543 56888876543
No 436
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=87.82 E-value=98 Score=40.86 Aligned_cols=232 Identities=11% Similarity=0.093 Sum_probs=118.2
Q ss_pred ecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecC-ccceeeeEEeCCC--cEEEeecCCe--EEEEECCCCceeE
Q psy8748 1743 AQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGY-EGFLSSCRFIDDT--TLLTGSGDMK--IVTWNLETGQRIH 1817 (2004)
Q Consensus 1743 SPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh-~~~Vssvafsdd~--~LlSgS~DGt--I~IWDl~tg~~i~ 1817 (2004)
..++..++.+..+|.+....+..... .......+. .....++.+.+++ .+++|+.-|. +..|....-+.+.
T Consensus 219 ~~~~~~~lL~~e~G~l~~l~l~~~~~----~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~~~~~~l~~~~ 294 (504)
T PF10433_consen 219 DKDGDRILLQDEDGDLYLLTLDNDGG----SISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQISLSNLEVLD 294 (504)
T ss_dssp STTSSEEEEEETTSEEEEEEEEEEEE----EEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEEEESESEEEEE
T ss_pred cCCCCEEEEEeCCCeEEEEEEEECCC----eEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEEEeCCCcEEEE
Confidence 34577899999999999988865321 222233333 5566777888888 8888887554 4445532222222
Q ss_pred EeeccccCCeEEEEECCC----CC------EEEEEE---CCCeEEEEECCCCeE--EEEEecCC--CCeEEEEEeC-CCC
Q psy8748 1818 EVAQAHIGDVVSISLSPD----GQ------YFVTGS---VDKSCKLWDFREKKC--VQTFFGHE--ADVNSVCFHP-SGL 1879 (2004)
Q Consensus 1818 ~il~~h~~~ItsLafSPd----g~------~LaSGS---~DGsIrIWDlrs~k~--I~tl~~h~--s~ItsIafSP-dg~ 1879 (2004)
.+ ..-++|.++++.+. .. .+++++ .+|.+++..-.-+-. ........ ..++.+.... ++.
T Consensus 295 ~~--~N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~Gi~~~~~~~~~~~l~~v~~iW~l~~~~~~~~ 372 (504)
T PF10433_consen 295 SL--PNWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRNGIGIEGLELASSELPGVTGIWTLKLSSSDHS 372 (504)
T ss_dssp EE------SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEESBEEE--EEEEEEESTEEEEEEE-SSSSSBS
T ss_pred ec--cCcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEeccCCceeeeeeccCCCCceEEEEeeecCCCce
Confidence 22 44578888888531 11 455554 467888875321111 11222222 2233333222 245
Q ss_pred EEEEEECCCeEEEEEcc---CCceeEEEc---CCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEcc-CC
Q psy8748 1880 AFATGSEDKTARLFDIR---ADQQIATYL---PPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSG-HE 1952 (2004)
Q Consensus 1880 ~LaSgS~DGtIrIWDLr---tgk~i~t~~---~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~g-Hs 1952 (2004)
+++.+..+ .-+++.+. ....+.... .......+.+..+. +..++=.+.. .|++.+...++....... ..
T Consensus 373 ~lv~S~~~-~T~vl~~~~~d~~e~~~e~~~~~f~~~~~Tl~~~~~~--~~~ivQVt~~-~i~l~~~~~~~~~~~w~~~~~ 448 (504)
T PF10433_consen 373 YLVLSFPN-ETRVLQISEGDDGEEVEEVEEDGFDTDEPTLAAGNVG--DGRIVQVTPK-GIRLIDLEDGKLTQEWKPPAG 448 (504)
T ss_dssp EEEEEESS-EEEEEEES----SSEEEEE---TS-SSS-EEEEEEET--TTEEEEEESS-EEEEEESSSTSEEEEEE-TTS
T ss_pred EEEEEcCC-ceEEEEEecccCCcchhhhhhccCCCCCCCeEEEEcC--CCeEEEEecC-eEEEEECCCCeEEEEEeCCCC
Confidence 66666654 45566553 233332221 11111122222222 4555555444 488888877777766533 34
Q ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeE
Q psy8748 1953 NRVTSISLSPNGMALVTSSWDQFVKVWQESNTIV 1986 (2004)
Q Consensus 1953 ~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l 1986 (2004)
..|.+.+. ++.+++.+-.+|.+..+.++....
T Consensus 449 ~~I~~a~~--~~~~v~v~~~~~~~~~~~~~~~~~ 480 (504)
T PF10433_consen 449 SIIVAASI--NDPQVLVALSGGELVYFELDDNKI 480 (504)
T ss_dssp ---SEEEE--SSSEEEEEE-TTEEEEEEEETTEE
T ss_pred CeEEEEEE--CCCEEEEEEeCCcEEEEEEECCce
Confidence 45555555 345677777789999999988754
No 437
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=87.49 E-value=27 Score=45.98 Aligned_cols=159 Identities=14% Similarity=0.184 Sum_probs=87.5
Q ss_pred ccccccceeEEEEeCCCCE-EEEEe--CCCeEEEEECCCCceEEEeeCCCCceEEEEEecC----CCEEEEeecCCeEEE
Q psy8748 1688 LKGHINKVNSVHYSGDSRH-CVSGS--LDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQS----GNFVACGGMDNMCTV 1760 (2004)
Q Consensus 1688 L~GHt~~VtsLaFSPDG~~-LASGS--~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPd----g~~LaSGS~DGtIrV 1760 (2004)
|..--.+|..++|. ||+. +.|.- .+|.+++=| .+.+ +.-..|.++.|.|- ...+++.-....|.|
T Consensus 15 L~qAiHPvhGlaWT-DGkqVvLT~L~l~~gE~kfGd---s~vi----GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtV 86 (671)
T PF15390_consen 15 LHQAIHPVHGLAWT-DGKQVVLTDLQLHNGEPKFGD---SKVI----GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTV 86 (671)
T ss_pred HHhhhccccceEec-CCCEEEEEeeeeeCCccccCC---ccEe----eccceeeeeeecCcccCCCCceEEEeccceEEE
Confidence 33444688899996 5554 44432 123332211 1222 23345899999985 335556666788999
Q ss_pred EEcCCCCCCCcceEEEEEe-----cCccceeeeEEeCCCcEEEeecCCeE-EEEECCCCceeEEeeccccCCeEEEEECC
Q psy8748 1761 YDLNNRDSTGAAKVIRELL-----GYEGFLSSCRFIDDTTLLTGSGDMKI-VTWNLETGQRIHEVAQAHIGDVVSISLSP 1834 (2004)
Q Consensus 1761 WDl~t~~~~~~~k~i~sl~-----gh~~~Vssvafsdd~~LlSgS~DGtI-~IWDl~tg~~i~~il~~h~~~ItsLafSP 1834 (2004)
|.+...... ..+...... ...---..+.|++..-+++.-....+ .++++.......+.--...+.|.|.+|.+
T Consensus 87 WqL~~s~~e-~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~ 165 (671)
T PF15390_consen 87 WQLCPSTTE-RNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTK 165 (671)
T ss_pred EEeccCccc-cccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecC
Confidence 998632111 111111111 11112345778877665544333333 44555544333333335678899999999
Q ss_pred CCCEEEEEECC-CeEEEEECCC
Q psy8748 1835 DGQYFVTGSVD-KSCKLWDFRE 1855 (2004)
Q Consensus 1835 dg~~LaSGS~D-GsIrIWDlrs 1855 (2004)
||+.++++-.. =.-+|||-..
T Consensus 166 DG~RLVVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 166 DGQRLVVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred cCCEEEEEeCCeEEEEEecCch
Confidence 99988776433 2468888543
No 438
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=87.40 E-value=91 Score=39.31 Aligned_cols=199 Identities=12% Similarity=-0.004 Sum_probs=108.9
Q ss_pred CCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccC
Q psy8748 1746 GNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIG 1825 (2004)
Q Consensus 1746 g~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~ 1825 (2004)
+..++++..+|.|...|.+++.......... ....+..-....++.+++++.+|.++.+|.++|+...........
T Consensus 68 dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~----~~~~~~~~~~~~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~ 143 (370)
T COG1520 68 DGTVYVGTRDGNIFALNPDTGLVKWSYPLLG----AVAQLSGPILGSDGKIYVGSWDGKLYALDASTGTLVWSRNVGGSP 143 (370)
T ss_pred CCeEEEecCCCcEEEEeCCCCcEEecccCcC----cceeccCceEEeCCeEEEecccceEEEEECCCCcEEEEEecCCCe
Confidence 3445555778878777777654221111111 111222222233677999999999999999888877655322200
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCC---CCeEEEEEeCCCCEEEEEEC--CCeEEEEEccCCce
Q psy8748 1826 DVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHE---ADVNSVCFHPSGLAFATGSE--DKTARLFDIRADQQ 1900 (2004)
Q Consensus 1826 ~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~---s~ItsIafSPdg~~LaSgS~--DGtIrIWDLrtgk~ 1900 (2004)
.+..-.+- ....++.++.+|.+...|..+++......... ..+..--.. ....++.+.. ++.+.-.|..+|..
T Consensus 144 ~~~~~~v~-~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~-~~~~vy~~~~~~~~~~~a~~~~~G~~ 221 (370)
T COG1520 144 YYASPPVV-GDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAI-ASGTVYVGSDGYDGILYALNAEDGTL 221 (370)
T ss_pred EEecCcEE-cCcEEEEecCCCeEEEEEccCCcEEEEEecCCccccccccCcee-ecceEEEecCCCcceEEEEEccCCcE
Confidence 11111111 23344455578999999988888766643322 111111111 2234555555 66777888888877
Q ss_pred eEEEcCCCC--CCCe------EEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccC
Q psy8748 1901 IATYLPPNK--NSGF------TSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGH 1951 (2004)
Q Consensus 1901 i~t~~~~~~--~s~I------tsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gH 1951 (2004)
......... ...+ ..-...-+ .-++.++.+|.+...|..+++.+......
T Consensus 222 ~w~~~~~~~~~~~~~~~~~~~~~~~v~v~-~~~~~~~~~g~~~~l~~~~G~~~W~~~~~ 279 (370)
T COG1520 222 KWSQKVSQTIGRTAISTTPAVDGGPVYVD-GGVYAGSYGGKLLCLDADTGELIWSFPAG 279 (370)
T ss_pred eeeeeeecccCcccccccccccCceEEEC-CcEEEEecCCeEEEEEcCCCceEEEEecc
Confidence 766321111 0111 11111112 22466777888999999999988887653
No 439
>KOG3630|consensus
Probab=87.32 E-value=4.6 Score=55.65 Aligned_cols=143 Identities=16% Similarity=0.082 Sum_probs=91.5
Q ss_pred CCeEEEEECCCCCEEEEEE--CCCeEEEEECCCCeEE-----EEE------ecCCCCeEEEEEeCCCC-EEEEEECCCeE
Q psy8748 1825 GDVVSISLSPDGQYFVTGS--VDKSCKLWDFREKKCV-----QTF------FGHEADVNSVCFHPSGL-AFATGSEDKTA 1890 (2004)
Q Consensus 1825 ~~ItsLafSPdg~~LaSGS--~DGsIrIWDlrs~k~I-----~tl------~~h~s~ItsIafSPdg~-~LaSgS~DGtI 1890 (2004)
..+..+...+|+...++.. .+-.|..||++.-..- .-+ ........++.|.|.-. ..+++..|+.|
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl 180 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSL 180 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccch
Confidence 4566666677766544443 3337899998753211 111 11223456788888532 36677789999
Q ss_pred EEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEcc----CCCCeEEEEEcCCCCE
Q psy8748 1891 RLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSG----HENRVTSISLSPNGMA 1966 (2004)
Q Consensus 1891 rIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~g----Hs~~VtsLaFSPDg~~ 1966 (2004)
++..+......... .......++++|+|.|+.+++|...|++.-|.. .++....+.. ...+|.+|+|-....+
T Consensus 181 ~V~~~~~~~~~v~s--~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P-~leik~~ip~Pp~~e~yrvl~v~Wl~t~ef 257 (1405)
T KOG3630|consen 181 RVKSTKQLAQNVTS--FPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEP-SLEIKSEIPEPPVEENYRVLSVTWLSTQEF 257 (1405)
T ss_pred hhhhhhhhhhhhcc--cCcccceeeEEeccccceeeEecCCCeEEEeec-ccceeecccCCCcCCCcceeEEEEecceeE
Confidence 99887643332222 133456899999999999999999999998875 3333333321 2468999999877776
Q ss_pred EEEE
Q psy8748 1967 LVTS 1970 (2004)
Q Consensus 1967 LaSg 1970 (2004)
+++-
T Consensus 258 lvvy 261 (1405)
T KOG3630|consen 258 LVVY 261 (1405)
T ss_pred EEEe
Confidence 6654
No 440
>KOG4499|consensus
Probab=87.31 E-value=64 Score=38.36 Aligned_cols=92 Identities=12% Similarity=0.184 Sum_probs=63.7
Q ss_pred eEEEEECCCCCEEEEE-ECCCeEEEEE--CCCCe-----EEEEEec----CCCCeEEEEEeCCCCEEEEEECCCeEEEEE
Q psy8748 1827 VVSISLSPDGQYFVTG-SVDKSCKLWD--FREKK-----CVQTFFG----HEADVNSVCFHPSGLAFATGSEDKTARLFD 1894 (2004)
Q Consensus 1827 ItsLafSPdg~~LaSG-S~DGsIrIWD--lrs~k-----~I~tl~~----h~s~ItsIafSPdg~~LaSgS~DGtIrIWD 1894 (2004)
-..++|+.+.+.++.. +.+-.|.-|| ..+|. .+..++. ..-..-.++...+|+..++.-..|+|...|
T Consensus 160 sNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~d 239 (310)
T KOG4499|consen 160 SNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVD 239 (310)
T ss_pred CccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEEC
Confidence 4568898877766554 4556777787 44432 2333322 111233556677888888888899999999
Q ss_pred ccCCceeEEEcCCCCCCCeEEEEEcC
Q psy8748 1895 IRADQQIATYLPPNKNSGFTSCAVSS 1920 (2004)
Q Consensus 1895 Lrtgk~i~t~~~~~~~s~ItsLafSP 1920 (2004)
..+|+.+..+..+ ...+++++|--
T Consensus 240 p~tGK~L~eiklP--t~qitsccFgG 263 (310)
T KOG4499|consen 240 PTTGKILLEIKLP--TPQITSCCFGG 263 (310)
T ss_pred CCCCcEEEEEEcC--CCceEEEEecC
Confidence 9999999999766 46799999964
No 441
>PLN02193 nitrile-specifier protein
Probab=87.10 E-value=53 Score=43.03 Aligned_cols=198 Identities=13% Similarity=0.082 Sum_probs=96.6
Q ss_pred eCCCcEEEeecC-------CeEEEEECCCCceeEEeecc-ccC--Ce-EEEEECCCCCEEEEEECC-----CeEEEEECC
Q psy8748 1791 IDDTTLLTGSGD-------MKIVTWNLETGQRIHEVAQA-HIG--DV-VSISLSPDGQYFVTGSVD-----KSCKLWDFR 1854 (2004)
Q Consensus 1791 sdd~~LlSgS~D-------GtI~IWDl~tg~~i~~il~~-h~~--~I-tsLafSPdg~~LaSGS~D-----GsIrIWDlr 1854 (2004)
..+..++.|+.+ ..+..||+.+.+.......+ ... .. .+++. -++...+.|+.+ ..+.+||+.
T Consensus 174 ~~~~iyv~GG~~~~~~~~~~~v~~yD~~~~~W~~~~~~g~~P~~~~~~~~~v~-~~~~lYvfGG~~~~~~~ndv~~yD~~ 252 (470)
T PLN02193 174 VGNKIYSFGGEFTPNQPIDKHLYVFDLETRTWSISPATGDVPHLSCLGVRMVS-IGSTLYVFGGRDASRQYNGFYSFDTT 252 (470)
T ss_pred ECCEEEEECCcCCCCCCeeCcEEEEECCCCEEEeCCCCCCCCCCcccceEEEE-ECCEEEEECCCCCCCCCccEEEEECC
Confidence 344455566642 34778898876543211110 111 01 11222 245666667654 358889988
Q ss_pred CCeEEEEEec---CC-CCeEEEEEeCCCCEEEEEECCC-----eEEEEEccCCceeEEEcC---CCCCCCeEEEEEcCCC
Q psy8748 1855 EKKCVQTFFG---HE-ADVNSVCFHPSGLAFATGSEDK-----TARLFDIRADQQIATYLP---PNKNSGFTSCAVSSSG 1922 (2004)
Q Consensus 1855 s~k~I~tl~~---h~-s~ItsIafSPdg~~LaSgS~DG-----tIrIWDLrtgk~i~t~~~---~~~~s~ItsLafSPdG 1922 (2004)
+.+-...-.. .. ..-.+++ .-++++++.|+.++ .+..||+.+.+-...-.. +........+. -++
T Consensus 253 t~~W~~l~~~~~~P~~R~~h~~~-~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~~~~~--~~g 329 (470)
T PLN02193 253 TNEWKLLTPVEEGPTPRSFHSMA-ADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGAGLEV--VQG 329 (470)
T ss_pred CCEEEEcCcCCCCCCCccceEEE-EECCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCcEEEE--ECC
Confidence 7543221110 01 1111222 23456666776543 367788776543211110 01111112222 357
Q ss_pred CEEEEEeCC----CeEEEEECCCCeeeEEEcc---CCCCeEEEEEcCCCCEEEEEECC--------------CeEEEEEC
Q psy8748 1923 RYIFCGSDD----NNVHVWDLLKTTHNGVLSG---HENRVTSISLSPNGMALVTSSWD--------------QFVKVWQE 1981 (2004)
Q Consensus 1923 ~~LaSGSsD----GsIrIWDL~tge~l~tL~g---Hs~~VtsLaFSPDg~~LaSgS~D--------------GtIrIWdl 1981 (2004)
++++.|+.+ ..+.+||..+.+-...-.. ...+...-+..-++++++.||.+ ..+.+||.
T Consensus 330 kiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D~ 409 (470)
T PLN02193 330 KVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALDT 409 (470)
T ss_pred cEEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEEEc
Confidence 777777755 4589999877654332111 11111111222356777777753 24788888
Q ss_pred CCCeEEEEEEee
Q psy8748 1982 SNTIVWKVLKVY 1993 (2004)
Q Consensus 1982 stg~l~k~Ik~~ 1993 (2004)
.+. .|..+...
T Consensus 410 ~t~-~W~~~~~~ 420 (470)
T PLN02193 410 ETL-QWERLDKF 420 (470)
T ss_pred CcC-EEEEcccC
Confidence 876 48777643
No 442
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=86.73 E-value=9.9 Score=50.98 Aligned_cols=132 Identities=17% Similarity=0.235 Sum_probs=85.2
Q ss_pred cccccccccccccccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEee-CCCCceEEEEEe--cCCCEEEEeecC
Q psy8748 1679 KVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIP-LRSAWVMSVAFA--QSGNFVACGGMD 1755 (2004)
Q Consensus 1679 ~lk~~pi~sL~GHt~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~-~Ht~~ItsLafS--Pdg~~LaSGS~D 1755 (2004)
.+.|....++..-.....-+.-|.-++..++-+....+.|||...+....... ...+.|.++.|. |+|+.+++.|..
T Consensus 16 ~~~w~~t~~~~T~i~~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~ 95 (631)
T PF12234_consen 16 KIEWLLTSTFETGISNPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFP 95 (631)
T ss_pred eEEEEEEEEEecCCCCcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcC
Confidence 34444455555555566666666656655555555679999998887554433 356789999995 588999999999
Q ss_pred CeEEEEEcCCCC---CCCcceEEEE--EecC-ccceeeeEEeCCCcEEEeecCCeEEEEECC
Q psy8748 1756 NMCTVYDLNNRD---STGAAKVIRE--LLGY-EGFLSSCRFIDDTTLLTGSGDMKIVTWNLE 1811 (2004)
Q Consensus 1756 GtIrVWDl~t~~---~~~~~k~i~s--l~gh-~~~Vssvafsdd~~LlSgS~DGtI~IWDl~ 1811 (2004)
+.|.+|.-...+ .......++. +..+ ...|.+..|.+++.+++|+. +.+.++|-.
T Consensus 96 ~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG-Nqlfv~dk~ 156 (631)
T PF12234_consen 96 HHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG-NQLFVFDKW 156 (631)
T ss_pred cEEEEEEccchhhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC-CEEEEECCC
Confidence 999998643211 1111222222 2223 36788899999988888774 467777643
No 443
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=86.69 E-value=85 Score=38.23 Aligned_cols=240 Identities=14% Similarity=0.105 Sum_probs=132.1
Q ss_pred eEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCcee
Q psy8748 1737 VMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRI 1816 (2004)
Q Consensus 1737 ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i 1816 (2004)
-..++-.+||...+++...|.|--.|-.+++ ....-.+....-..+...+++....+.....|.-.|.++.+..
T Consensus 64 p~dvapapdG~VWft~qg~gaiGhLdP~tGe------v~~ypLg~Ga~Phgiv~gpdg~~Witd~~~aI~R~dpkt~evt 137 (353)
T COG4257 64 PFDVAPAPDGAVWFTAQGTGAIGHLDPATGE------VETYPLGSGASPHGIVVGPDGSAWITDTGLAIGRLDPKTLEVT 137 (353)
T ss_pred ccccccCCCCceEEecCccccceecCCCCCc------eEEEecCCCCCCceEEECCCCCeeEecCcceeEEecCcccceE
Confidence 4556677777777777666666555554432 2222222222233333333333333222224555555544432
Q ss_pred EEe--eccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEec-CCCCeEEEEEeCCCCEEEEEECCCeEEEE
Q psy8748 1817 HEV--AQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFG-HEADVNSVCFHPSGLAFATGSEDKTARLF 1893 (2004)
Q Consensus 1817 ~~i--l~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~-h~s~ItsIafSPdg~~LaSgS~DGtIrIW 1893 (2004)
.-. ............|++.|+.-+++.. |.---.|-.. ..+..+.. .......|+..|+|..-++.-.+..|-..
T Consensus 138 ~f~lp~~~a~~nlet~vfD~~G~lWFt~q~-G~yGrLdPa~-~~i~vfpaPqG~gpyGi~atpdGsvwyaslagnaiari 215 (353)
T COG4257 138 RFPLPLEHADANLETAVFDPWGNLWFTGQI-GAYGRLDPAR-NVISVFPAPQGGGPYGICATPDGSVWYASLAGNAIARI 215 (353)
T ss_pred EeecccccCCCcccceeeCCCccEEEeecc-ccceecCccc-CceeeeccCCCCCCcceEECCCCcEEEEeccccceEEc
Confidence 111 1223445677889999987777652 2211112111 12333322 23456789999999988887788888888
Q ss_pred EccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCe-eeEEEccCCCCeEEEEEcCCCCEEEEEEC
Q psy8748 1894 DIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTT-HNGVLSGHENRVTSISLSPNGMALVTSSW 1972 (2004)
Q Consensus 1894 DLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge-~l~tL~gHs~~VtsLaFSPDg~~LaSgS~ 1972 (2004)
|..++.....-...........+-.+|.|+.-++-...|.++.||-.+.. ....+.+...+-.++.....++.-.+--.
T Consensus 216 dp~~~~aev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~sW~eypLPgs~arpys~rVD~~grVW~sea~ 295 (353)
T COG4257 216 DPFAGHAEVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTSWIEYPLPGSKARPYSMRVDRHGRVWLSEAD 295 (353)
T ss_pred ccccCCcceecCCCcccccccccccCccCcEEEeccCCceeeEeCcccccceeeeCCCCCCCcceeeeccCCcEEeeccc
Confidence 88777433332222324556677778889988887788888888865433 22334444445555666555555444444
Q ss_pred CCeEEEEECCCC
Q psy8748 1973 DQFVKVWQESNT 1984 (2004)
Q Consensus 1973 DGtIrIWdlstg 1984 (2004)
-|.|.-||-++.
T Consensus 296 agai~rfdpeta 307 (353)
T COG4257 296 AGAIGRFDPETA 307 (353)
T ss_pred cCceeecCcccc
Confidence 455666665554
No 444
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=86.46 E-value=72 Score=40.47 Aligned_cols=41 Identities=5% Similarity=0.101 Sum_probs=20.0
Q ss_pred CeEEEEECCCCceeEEeeccc-cCCeEEEEECCCCCEEEEEEC
Q psy8748 1803 MKIVTWNLETGQRIHEVAQAH-IGDVVSISLSPDGQYFVTGSV 1844 (2004)
Q Consensus 1803 GtI~IWDl~tg~~i~~il~~h-~~~ItsLafSPdg~~LaSGS~ 1844 (2004)
..+.+||..++.....-.... ...-.++... ++++.+.|+.
T Consensus 189 ~~v~~YD~~t~~W~~~~~~p~~~~~~~a~v~~-~~~iYv~GG~ 230 (376)
T PRK14131 189 KEVLSYDPSTNQWKNAGESPFLGTAGSAVVIK-GNKLWLINGE 230 (376)
T ss_pred ceEEEEECCCCeeeECCcCCCCCCCcceEEEE-CCEEEEEeee
Confidence 358889988776542111111 1112233333 5666666664
No 445
>TIGR01063 gyrA DNA gyrase, A subunit. This model describes the common type II DNA topoisomerase (DNA gyrase). Two apparently independently arising families, one in the Proteobacteria and one in Gram-positive lineages, are both designated toposisomerase IV.
Probab=85.70 E-value=1.8e+02 Score=40.99 Aligned_cols=240 Identities=10% Similarity=0.030 Sum_probs=124.0
Q ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCce-------EE--EeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCC---C
Q psy8748 1699 HYSGDSRHCVSGSLDGKLIIWDTWTGNK-------TQ--VIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNN---R 1766 (2004)
Q Consensus 1699 aFSPDG~~LASGS~DGtIrVWDl~Tgk~-------l~--ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t---~ 1766 (2004)
.+-++...+++.+.+|.|+--+..+... .. .++ ....+..+........++..+..|.+....... .
T Consensus 491 dli~~e~~~vllS~~GyIKri~~~~~~~~~~~~~g~s~~klK-e~D~l~~~~~~~t~d~LllfTs~Grv~~l~~~~IP~~ 569 (800)
T TIGR01063 491 DLIARENVVVTLSHNGYVKRVPVSAYRLQKRGGKGVSGADMK-DDDFIEQLLVASTHDYLLFFTNRGKVYWLKVYQIPEA 569 (800)
T ss_pred hccCcceEEEEEcCCCEEEecchhhhhhhcccCcCccccccC-CCCeeEEEEEecCCCeEEEEeCCCcEEEEEhhhCcCC
Confidence 3446677788889999988776543211 11 112 233455555555666666677777665554422 1
Q ss_pred CCCCcceEE---EEEecCccceeeeE---EeCCCcEEEeecCCeEEEEECCCCceeEE-----eeccccCCeEEEEECCC
Q psy8748 1767 DSTGAAKVI---RELLGYEGFLSSCR---FIDDTTLLTGSGDMKIVTWNLETGQRIHE-----VAQAHIGDVVSISLSPD 1835 (2004)
Q Consensus 1767 ~~~~~~k~i---~sl~gh~~~Vssva---fsdd~~LlSgS~DGtI~IWDl~tg~~i~~-----il~~h~~~ItsLafSPd 1835 (2004)
.....+..+ ..+......+.++. +.++..++..+.+|.++-.++..-..... +.....+.+..+.....
T Consensus 570 ~r~~~G~~i~~ll~L~~~E~Iv~~i~~~~~~~~~~lvliT~~GyiKRi~l~~~~~~~r~G~~aiklke~D~lv~v~~~~~ 649 (800)
T TIGR01063 570 SRTAKGKPIVNLLPLQPDERITAILSVKEFDDGLYLFFATKNGVVKKTSLTEFSNIRSNGIIAIKLDDGDELISVRLTSG 649 (800)
T ss_pred CcCCCCcCHHHhccCCCCCeEEEEEEeccCCCCCEEEEEeCCCEEEEEEhHHhhhhccCCcccccCCCCCEEEEEEEeCC
Confidence 111112211 12223333444444 33556789999999999887654221100 00011334444444444
Q ss_pred CCEEEEEECCCeEEEEECCC---------CeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccC-------Cc
Q psy8748 1836 GQYFVTGSVDKSCKLWDFRE---------KKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRA-------DQ 1899 (2004)
Q Consensus 1836 g~~LaSGS~DGsIrIWDlrs---------~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrt-------gk 1899 (2004)
...++..+..|.+..+.... |.....+ .....|.++....++..++..+..|.++...+.. ++
T Consensus 650 ~d~lll~Ts~Gr~~r~~v~eIp~~gr~~~Gv~~i~L-~~~E~Vv~~~~v~~~~~ll~vT~~G~~Kr~~l~e~~~~~R~~k 728 (800)
T TIGR01063 650 DDEVMLGSKNGKAVRFPEEDVRPMGRAARGVRGIKL-KNEDFVVSLLVVSEESYLLIVTENGYGKRTSIEEYRETSRGGK 728 (800)
T ss_pred CCEEEEEECCCcEEEEEhhhcCCcCCCCCCeecccC-CCCCEEEEEEEeccccEEEEEecCCcEEEEEHHHccccCCCCc
Confidence 55677777788766665431 1111122 1234455555445555788888899888876532 11
Q ss_pred eeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy8748 1900 QIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLL 1940 (2004)
Q Consensus 1900 ~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~ 1940 (2004)
-...+........+..+....+...++..+.+|.+..++..
T Consensus 729 Gv~~ikl~~~~d~lv~~~~v~~~~~v~liT~~G~~lrf~~~ 769 (800)
T TIGR01063 729 GVKSIKITDRNGQVVGAIAVDDDDELMLITSAGKLIRTSVQ 769 (800)
T ss_pred ceEEEEccCCCCeEEEEEEecCCCeEEEEecCCeEEEeeHh
Confidence 22222111212334343333444456666777777766654
No 446
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=85.70 E-value=94 Score=37.89 Aligned_cols=243 Identities=14% Similarity=0.041 Sum_probs=142.7
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCcc
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAA 1772 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~ 1772 (2004)
..-..++-.|||..-+++...|.|-=.|..+|+....--+....-..|...|||...++-+.. .|.-.|-++.+. .
T Consensus 62 ~ap~dvapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~ev---t 137 (353)
T COG4257 62 SAPFDVAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEV---T 137 (353)
T ss_pred CCccccccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccce---E
Confidence 345677888899888888777888888888888776655556667788888888877765443 344444433221 0
Q ss_pred eEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEE
Q psy8748 1773 KVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWD 1852 (2004)
Q Consensus 1773 k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWD 1852 (2004)
+................|.+.+.+...+..|.---.|..++... .+.......-..|+..|+|..-++.-.++.|...|
T Consensus 138 ~f~lp~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~-vfpaPqG~gpyGi~atpdGsvwyaslagnaiarid 216 (353)
T COG4257 138 RFPLPLEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVIS-VFPAPQGGGPYGICATPDGSVWYASLAGNAIARID 216 (353)
T ss_pred EeecccccCCCcccceeeCCCccEEEeeccccceecCcccCcee-eeccCCCCCCcceEECCCCcEEEEeccccceEEcc
Confidence 11111222234455555665555444443333222232222211 11122344567888999999888777777888888
Q ss_pred CCCCeEEEEEe---cCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEe
Q psy8748 1853 FREKKCVQTFF---GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGS 1929 (2004)
Q Consensus 1853 lrs~k~I~tl~---~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGS 1929 (2004)
..++.. ..+. .....-+.+--+|.|..-++....|.+..||-.+.. -..+..++....-.++.++..|+.-.+--
T Consensus 217 p~~~~a-ev~p~P~~~~~gsRriwsdpig~~wittwg~g~l~rfdPs~~s-W~eypLPgs~arpys~rVD~~grVW~sea 294 (353)
T COG4257 217 PFAGHA-EVVPQPNALKAGSRRIWSDPIGRAWITTWGTGSLHRFDPSVTS-WIEYPLPGSKARPYSMRVDRHGRVWLSEA 294 (353)
T ss_pred cccCCc-ceecCCCcccccccccccCccCcEEEeccCCceeeEeCccccc-ceeeeCCCCCCCcceeeeccCCcEEeecc
Confidence 766632 2221 112334555566778777777777888888876544 34444455555556677776666665544
Q ss_pred CCCeEEEEECCCC
Q psy8748 1930 DDNNVHVWDLLKT 1942 (2004)
Q Consensus 1930 sDGsIrIWDL~tg 1942 (2004)
..|.|.-+|-++.
T Consensus 295 ~agai~rfdpeta 307 (353)
T COG4257 295 DAGAIGRFDPETA 307 (353)
T ss_pred ccCceeecCcccc
Confidence 5566666665443
No 447
>smart00036 CNH Domain found in NIK1-like kinases, mouse citron and yeast ROM1, ROM2. Unpublished observations.
Probab=85.65 E-value=1e+02 Score=38.14 Aligned_cols=239 Identities=12% Similarity=0.044 Sum_probs=113.6
Q ss_pred CCCEEEEEeCCCeEEEEECCC--CceEEEeeCCCCceEEEEEecCCCEEEEee-cCCeEEEEEcCCCCCC----C-----
Q psy8748 1703 DSRHCVSGSLDGKLIIWDTWT--GNKTQVIPLRSAWVMSVAFAQSGNFVACGG-MDNMCTVYDLNNRDST----G----- 1770 (2004)
Q Consensus 1703 DG~~LASGS~DGtIrVWDl~T--gk~l~ti~~Ht~~ItsLafSPdg~~LaSGS-~DGtIrVWDl~t~~~~----~----- 1770 (2004)
++++|+.|+++|. .+-+... ++..+.+ +...|+++...+..+.+++-+ ....++++++..-... .
T Consensus 12 ~~~~lL~GTe~Gl-y~~~~~~~~~~~~kl~--~~~~v~q~~v~~~~~lLi~Lsgk~~~L~~~~L~~L~~~~~~~~~~~~~ 88 (302)
T smart00036 12 DGKWLLVGTEEGL-YVLNISDQPGTLEKLI--GRRSVTQIWVLEENNVLLMISGKKPQLYSHPLSALVEKKEALGSARLV 88 (302)
T ss_pred CCcEEEEEeCCce-EEEEcccCCCCeEEec--CcCceEEEEEEhhhCEEEEEeCCcceEEEEEHHHhhhhhhccCCcccc
Confidence 3468999999984 4445544 2333332 355799999998777665544 4456999998543210 0
Q ss_pred cceEEEEEecCccceeeeEEeCCC--cEEEeecCCeEEEEECCCCceeEEeec-------cccCCeEEEEECC--CCCEE
Q psy8748 1771 AAKVIRELLGYEGFLSSCRFIDDT--TLLTGSGDMKIVTWNLETGQRIHEVAQ-------AHIGDVVSISLSP--DGQYF 1839 (2004)
Q Consensus 1771 ~~k~i~sl~gh~~~Vssvafsdd~--~LlSgS~DGtI~IWDl~tg~~i~~il~-------~h~~~ItsLafSP--dg~~L 1839 (2004)
..+......++......+....+. .++++....+|.++............. ....++..+..++ ....+
T Consensus 89 ~~~~~~~~~~~tkGc~~~~v~~~~~~~~l~~A~~~~i~l~~~~~~~~~f~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~l 168 (302)
T smart00036 89 IRKNVLTKIPDTKGCHLCAVVNGKRSLFLCVALQSSVVLLQWYNPLKKFKLFKSKFLFPLISPVPVFVELVSSSFERPGI 168 (302)
T ss_pred ccccceEeCCcCCceEEEEEEcCCCcEEEEEEcCCeEEEEEccChhhhhhhhcccccccCCCCccceEeeecccccceEE
Confidence 000011122222222222222222 345555666766654432211100011 1122333333333 25577
Q ss_pred EEEECCCeEEEEECCC--CeEEE----E-EecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCC
Q psy8748 1840 VTGSVDKSCKLWDFRE--KKCVQ----T-FFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSG 1912 (2004)
Q Consensus 1840 aSGS~DGsIrIWDlrs--~k~I~----t-l~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ 1912 (2004)
.+|+..+...++++.. ...-. . .........++...+++.+++ +- |....+.|....+....... .....
T Consensus 169 cvG~~~~~~~~~~~~~~~~~~~d~sl~~~~~~~~~~p~~i~~l~~~e~Ll-c~-~~~~v~Vn~~G~~~~r~~~l-~w~~~ 245 (302)
T smart00036 169 CIGSDKGGGDVVQFHESLVSKEDLSLPFLSEETSLKPISVVQVPRDEFLL-CY-DEFGVFVNLYGKRRSRNPIL-HWEFM 245 (302)
T ss_pred EEEEcCCCCeEEEEeecccccccccccccccccccCceEEEEECCCeEEE-EE-CcEEEEEeCCCCccccceEE-EcCCc
Confidence 7887653344555432 11000 0 011110233344444554444 33 34455555542122111100 11233
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEcc
Q psy8748 1913 FTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSG 1950 (2004)
Q Consensus 1913 ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~g 1950 (2004)
..++++. ..++++-+.+ .|.++++.+++.++.+..
T Consensus 246 p~~~~~~--~pyll~~~~~-~ievr~l~~~~l~q~i~~ 280 (302)
T smart00036 246 PESFAYH--SPYLLAFHDN-GIEIRSIKTGELLQELAD 280 (302)
T ss_pred ccEEEEE--CCEEEEEcCC-cEEEEECCCCceEEEEec
Confidence 4566665 4666666544 499999999998888763
No 448
>KOG1916|consensus
Probab=85.61 E-value=0.71 Score=61.44 Aligned_cols=92 Identities=17% Similarity=0.290 Sum_probs=53.9
Q ss_pred CeEEEEECC--CCce----eEEeeccccCCeEEEEECC---CCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEE
Q psy8748 1803 MKIVTWNLE--TGQR----IHEVAQAHIGDVVSISLSP---DGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVC 1873 (2004)
Q Consensus 1803 GtI~IWDl~--tg~~----i~~il~~h~~~ItsLafSP---dg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIa 1873 (2004)
|.+.+||++ .|+. ..+........+.-+.|.| +.-++..+-.+|.|++........ ..+.+|...+..++
T Consensus 153 g~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~wcp~~~~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a 231 (1283)
T KOG1916|consen 153 GELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSWCPIAVNKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMA 231 (1283)
T ss_pred hhhheeehHhhccccccceEEeecCcCCCCcceeeecccccccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHH
Confidence 566777765 2332 2222333334445566655 556777888888888877654322 33445665555443
Q ss_pred -----------EeCCCCEEEEEECCCeEEEEEc
Q psy8748 1874 -----------FHPSGLAFATGSEDKTARLFDI 1895 (2004)
Q Consensus 1874 -----------fSPdg~~LaSgS~DGtIrIWDL 1895 (2004)
.+|||..|+.++.||.++.|.+
T Consensus 232 ~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qi 264 (1283)
T KOG1916|consen 232 FFAEGVLKLASLSPDGTVFAWAISDGSVGFYQI 264 (1283)
T ss_pred HHhhchhhheeeCCCCcEEEEeecCCccceeee
Confidence 4677777777777777666654
No 449
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=85.57 E-value=9.3 Score=49.97 Aligned_cols=150 Identities=11% Similarity=0.137 Sum_probs=88.7
Q ss_pred CCeEEEEECCCCCEEEEEE---CCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCC----CCEEEEEECCCeEEEEEccC
Q psy8748 1825 GDVVSISLSPDGQYFVTGS---VDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPS----GLAFATGSEDKTARLFDIRA 1897 (2004)
Q Consensus 1825 ~~ItsLafSPdg~~LaSGS---~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPd----g~~LaSgS~DGtIrIWDLrt 1897 (2004)
.++..++|. ||+.++-.. .+|.+++=|- ..+ +.-..|.++.|.|- ...+.+......|.||.+..
T Consensus 20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kfGds---~vi----GqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~ 91 (671)
T PF15390_consen 20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKFGDS---KVI----GQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCP 91 (671)
T ss_pred ccccceEec-CCCEEEEEeeeeeCCccccCCc---cEe----eccceeeeeeecCcccCCCCceEEEeccceEEEEEecc
Confidence 457888887 565544332 2344433321 223 33355889999984 33455566688999999752
Q ss_pred -----CceeEEEcCC---CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC--CeeeEEEccCCCCeEEEEEcCCCCEE
Q psy8748 1898 -----DQQIATYLPP---NKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLK--TTHNGVLSGHENRVTSISLSPNGMAL 1967 (2004)
Q Consensus 1898 -----gk~i~t~~~~---~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~t--ge~l~tL~gHs~~VtsLaFSPDg~~L 1967 (2004)
++........ ...---..+.|+|....+++-.....=.+++++. ......+ ...+.|.|.+|.+||+.|
T Consensus 92 s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi-~~~G~IhCACWT~DG~RL 170 (671)
T PF15390_consen 92 STTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADI-KTSGLIHCACWTKDGQRL 170 (671)
T ss_pred CccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEec-cCCceEEEEEecCcCCEE
Confidence 2222111000 0000123578999999888776665545666643 2233333 457889999999999988
Q ss_pred EEEE-CCCeEEEEECCC
Q psy8748 1968 VTSS-WDQFVKVWQESN 1983 (2004)
Q Consensus 1968 aSgS-~DGtIrIWdlst 1983 (2004)
+.+- ..=.-+|||-..
T Consensus 171 VVAvGSsLHSyiWd~~q 187 (671)
T PF15390_consen 171 VVAVGSSLHSYIWDSAQ 187 (671)
T ss_pred EEEeCCeEEEEEecCch
Confidence 7763 333567787543
No 450
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=85.26 E-value=2 Score=38.54 Aligned_cols=34 Identities=12% Similarity=0.321 Sum_probs=30.0
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceE
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKT 1727 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l 1727 (2004)
..|.+++|+|...++|.|..+|.|.++.+ +++.+
T Consensus 12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qri 45 (47)
T PF12894_consen 12 SRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQRI 45 (47)
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcCc
Confidence 46999999999999999999999999998 55543
No 451
>TIGR03547 muta_rot_YjhT mutatrotase, YjhT family. Members of this protein family contain multiple copies of the beta-propeller-forming Kelch repeat. All are full-length homologs to YjhT of Escherichia coli, which has been identified as a mutarotase for sialic acid. This protein improves bacterial ability to obtain host sialic acid, and thus serves as a virulence factor. Some bacteria carry what appears to be a cyclically permuted homolog of this protein.
Probab=85.00 E-value=1e+02 Score=38.35 Aligned_cols=42 Identities=7% Similarity=0.068 Sum_probs=20.7
Q ss_pred CeEEEEECCCCceeEEeecccc-CCeEEEEECCCCCEEEEEECC
Q psy8748 1803 MKIVTWNLETGQRIHEVAQAHI-GDVVSISLSPDGQYFVTGSVD 1845 (2004)
Q Consensus 1803 GtI~IWDl~tg~~i~~il~~h~-~~ItsLafSPdg~~LaSGS~D 1845 (2004)
..+..||..+++....-..... ..-.+++ ..++++.+.|+.+
T Consensus 168 ~~v~~YDp~t~~W~~~~~~p~~~r~~~~~~-~~~~~iyv~GG~~ 210 (346)
T TIGR03547 168 KNVLSYDPSTNQWRNLGENPFLGTAGSAIV-HKGNKLLLINGEI 210 (346)
T ss_pred ceEEEEECCCCceeECccCCCCcCCCceEE-EECCEEEEEeeee
Confidence 4688899887664421111111 1112222 2356777777653
No 452
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=84.61 E-value=95 Score=37.38 Aligned_cols=200 Identities=14% Similarity=0.103 Sum_probs=103.2
Q ss_pred ceeeeEEeCCCc-EEEee---cCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEE-CCCCeE
Q psy8748 1784 FLSSCRFIDDTT-LLTGS---GDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWD-FREKKC 1858 (2004)
Q Consensus 1784 ~Vssvafsdd~~-LlSgS---~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWD-lrs~k~ 1858 (2004)
.+...+.+.+.. +++.. ....++++... ....... ....++.-.|++++...++...++..+++. ..++..
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~~--~~~~~~~--~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~ 100 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPAG--GPVRPVL--TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTG 100 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcCC--Ccceeec--cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcc
Confidence 455556664443 33333 33445555443 3222222 233678889999977666666566666663 233322
Q ss_pred E-EEEec--CCCCeEEEEEeCCCCEEEEEE---CCCeEEEEEccCCc-e-eEEE-----cCCCCCCCeEEEEEcCCCCEE
Q psy8748 1859 V-QTFFG--HEADVNSVCFHPSGLAFATGS---EDKTARLFDIRADQ-Q-IATY-----LPPNKNSGFTSCAVSSSGRYI 1925 (2004)
Q Consensus 1859 I-~tl~~--h~s~ItsIafSPdg~~LaSgS---~DGtIrIWDLrtgk-~-i~t~-----~~~~~~s~ItsLafSPdG~~L 1925 (2004)
. ..... ....|..+.++|||..++... .++.|.+--+.... - ...+ ........++.+.|.+++.++
T Consensus 101 ~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~W~~~~~L~ 180 (253)
T PF10647_consen 101 EPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVAWSDDSTLV 180 (253)
T ss_pred eeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeeeecCCCEEE
Confidence 1 11211 122899999999999877765 35677776543111 1 1111 111224578999999999988
Q ss_pred EEEeCCCe-EEE-EECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCeEEEEEE
Q psy8748 1926 FCGSDDNN-VHV-WDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLK 1991 (2004)
Q Consensus 1926 aSGSsDGs-IrI-WDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg~l~k~Ik 1991 (2004)
+.+...+. +.. ... .+.....+..-...+.-++...+...++..+ ++.+ |....+..|+.+.
T Consensus 181 V~~~~~~~~~~~~v~~-dG~~~~~l~~~~~~~~v~a~~~~~~~~~~t~-~~~~--~~~~~~~~W~~v~ 244 (253)
T PF10647_consen 181 VLGRSAGGPVVRLVSV-DGGPSTPLPSVNLGVPVVAVAASPSTVYVTD-DGGV--LQSRSGASWREVP 244 (253)
T ss_pred EEeCCCCCceeEEEEc-cCCcccccCCCCCCcceEEeeCCCcEEEEEC-CCcE--EECCCCCcceEcc
Confidence 87765443 333 333 2222222222222233333333433444443 4433 3266666676654
No 453
>TIGR01063 gyrA DNA gyrase, A subunit. This model describes the common type II DNA topoisomerase (DNA gyrase). Two apparently independently arising families, one in the Proteobacteria and one in Gram-positive lineages, are both designated toposisomerase IV.
Probab=84.34 E-value=2e+02 Score=40.57 Aligned_cols=238 Identities=11% Similarity=0.009 Sum_probs=123.1
Q ss_pred ecCCCEEEEeecCCeEEEEEcCCCCC---CCcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECC---C----
Q psy8748 1743 AQSGNFVACGGMDNMCTVYDLNNRDS---TGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLE---T---- 1812 (2004)
Q Consensus 1743 SPdg~~LaSGS~DGtIrVWDl~t~~~---~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~---t---- 1812 (2004)
-++...+++.+.+|.|+-........ .........+.........+.....+.++..+..|.++..+.. .
T Consensus 493 i~~e~~~vllS~~GyIKri~~~~~~~~~~~~~g~s~~klKe~D~l~~~~~~~t~d~LllfTs~Grv~~l~~~~IP~~~r~ 572 (800)
T TIGR01063 493 IARENVVVTLSHNGYVKRVPVSAYRLQKRGGKGVSGADMKDDDFIEQLLVASTHDYLLFFTNRGKVYWLKVYQIPEASRT 572 (800)
T ss_pred cCcceEEEEEcCCCEEEecchhhhhhhcccCcCccccccCCCCeeEEEEEecCCCeEEEEeCCCcEEEEEhhhCcCCCcC
Confidence 34456677778888888776543211 0001011111122222333334456668888888887766542 2
Q ss_pred --CceeEEeec-cccCC-eEEEEEC--CCCCEEEEEECCCeEEEEECCCCeE-------EEEEecCCCCeEEEEEeCCCC
Q psy8748 1813 --GQRIHEVAQ-AHIGD-VVSISLS--PDGQYFVTGSVDKSCKLWDFREKKC-------VQTFFGHEADVNSVCFHPSGL 1879 (2004)
Q Consensus 1813 --g~~i~~il~-~h~~~-ItsLafS--Pdg~~LaSGS~DGsIrIWDlrs~k~-------I~tl~~h~s~ItsIafSPdg~ 1879 (2004)
|..+..+.. ..... +.++.+. .++.+++..+.+|.++-.++..... ...+.. .+.+..+....+..
T Consensus 573 ~~G~~i~~ll~L~~~E~Iv~~i~~~~~~~~~~lvliT~~GyiKRi~l~~~~~~~r~G~~aiklke-~D~lv~v~~~~~~d 651 (800)
T TIGR01063 573 AKGKPIVNLLPLQPDERITAILSVKEFDDGLYLFFATKNGVVKKTSLTEFSNIRSNGIIAIKLDD-GDELISVRLTSGDD 651 (800)
T ss_pred CCCcCHHHhccCCCCCeEEEEEEeccCCCCCEEEEEeCCCEEEEEEhHHhhhhccCCcccccCCC-CCEEEEEEEeCCCC
Confidence 111111111 11222 3344432 3556889999999999887653221 112222 34455554555555
Q ss_pred EEEEEECCCeEEEEEccCCc-------eeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC-------Ce--
Q psy8748 1880 AFATGSEDKTARLFDIRADQ-------QIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLK-------TT-- 1943 (2004)
Q Consensus 1880 ~LaSgS~DGtIrIWDLrtgk-------~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~t-------ge-- 1943 (2004)
.++..+..|.+..+....-. -...... .....|.++..-.++.+++..+..|.++...+.. +.
T Consensus 652 ~lll~Ts~Gr~~r~~v~eIp~~gr~~~Gv~~i~L-~~~E~Vv~~~~v~~~~~ll~vT~~G~~Kr~~l~e~~~~~R~~kGv 730 (800)
T TIGR01063 652 EVMLGSKNGKAVRFPEEDVRPMGRAARGVRGIKL-KNEDFVVSLLVVSEESYLLIVTENGYGKRTSIEEYRETSRGGKGV 730 (800)
T ss_pred EEEEEECCCcEEEEEhhhcCCcCCCCCCeecccC-CCCCEEEEEEEeccccEEEEEecCCcEEEEEHHHccccCCCCcce
Confidence 67777778887766653211 1111111 1223355554444556788888999888876532 22
Q ss_pred eeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1944 HNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1944 ~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
....+....+.+..+....+...++..+.+|.+..+..+
T Consensus 731 ~~ikl~~~~d~lv~~~~v~~~~~v~liT~~G~~lrf~~~ 769 (800)
T TIGR01063 731 KSIKITDRNGQVVGAIAVDDDDELMLITSAGKLIRTSVQ 769 (800)
T ss_pred EEEEccCCCCeEEEEEEecCCCeEEEEecCCeEEEeeHh
Confidence 222233333455555554444556677778888777654
No 454
>KOG1900|consensus
Probab=84.34 E-value=82 Score=45.16 Aligned_cols=144 Identities=10% Similarity=0.114 Sum_probs=94.8
Q ss_pred CCCeEEEEECCCCceEEEeeCCCCceEEEEE--------ecCCCEEEEeecCCeEEEEEcCCCCCCCcc---eEEEEEec
Q psy8748 1712 LDGKLIIWDTWTGNKTQVIPLRSAWVMSVAF--------AQSGNFVACGGMDNMCTVYDLNNRDSTGAA---KVIRELLG 1780 (2004)
Q Consensus 1712 ~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLaf--------SPdg~~LaSGS~DGtIrVWDl~t~~~~~~~---k~i~sl~g 1780 (2004)
-|+.+.+|+..++.....+.+-...|..+.. -|.=+++++.+.--.|.++-+...+..... .....+..
T Consensus 97 iDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~~ 176 (1311)
T KOG1900|consen 97 IDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKISV 176 (1311)
T ss_pred eCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeeec
Confidence 4788999999998888888877777776654 222344444455556777765433221111 11123334
Q ss_pred CccceeeeEEeCCCcEEEeecCCeEEEEECC--CC---c-e----------------eEEeeccccCCeEEEEECCCCCE
Q psy8748 1781 YEGFLSSCRFIDDTTLLTGSGDMKIVTWNLE--TG---Q-R----------------IHEVAQAHIGDVVSISLSPDGQY 1838 (2004)
Q Consensus 1781 h~~~Vssvafsdd~~LlSgS~DGtI~IWDl~--tg---~-~----------------i~~il~~h~~~ItsLafSPdg~~ 1838 (2004)
....+.++.+.++++++.+|.||.|+-.-.. .| + + +..+...+..+|..+.++...+.
T Consensus 177 dg~~V~~I~~t~nGRIF~~G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~SR~I 256 (1311)
T KOG1900|consen 177 DGVSVNCITYTENGRIFFAGRDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDNSRNI 256 (1311)
T ss_pred CCceEEEEEeccCCcEEEeecCCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEeccccce
Confidence 4667888888888999999999955432221 11 1 0 01112255778999999998999
Q ss_pred EEEEECCCeEEEEECCC
Q psy8748 1839 FVTGSVDKSCKLWDFRE 1855 (2004)
Q Consensus 1839 LaSGS~DGsIrIWDlrs 1855 (2004)
+++-+..|+|.+||+..
T Consensus 257 lY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 257 LYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred eeeeccCceEEEEEccC
Confidence 99999999999999975
No 455
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=83.91 E-value=1.2e+02 Score=37.59 Aligned_cols=223 Identities=13% Similarity=0.077 Sum_probs=122.3
Q ss_pred ceeEEEEeCCCCEEEEEeCCCeEEEEECC------CC-ceEEEeeC-----CCCceEEEEEecCCC------------EE
Q psy8748 1694 KVNSVHYSGDSRHCVSGSLDGKLIIWDTW------TG-NKTQVIPL-----RSAWVMSVAFAQSGN------------FV 1749 (2004)
Q Consensus 1694 ~VtsLaFSPDG~~LASGS~DGtIrVWDl~------Tg-k~l~ti~~-----Ht~~ItsLafSPdg~------------~L 1749 (2004)
.-+.|+|+|.+.+-++....+...+||.. .. ..+.++.. .....+.+.|+.... .+
T Consensus 24 N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~F 103 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRF 103 (336)
T ss_pred ccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeE
Confidence 34689999999888877778899999985 12 22334442 234577888875433 36
Q ss_pred EEeecCCeEEEEEcCCCCCCCcceEEEEEe-c-CccceeeeEEe---CCCcEEE-eecCCeEEEEECCCCceeEEeeccc
Q psy8748 1750 ACGGMDNMCTVYDLNNRDSTGAAKVIRELL-G-YEGFLSSCRFI---DDTTLLT-GSGDMKIVTWNLETGQRIHEVAQAH 1823 (2004)
Q Consensus 1750 aSGS~DGtIrVWDl~t~~~~~~~k~i~sl~-g-h~~~Vssvafs---dd~~LlS-gS~DGtI~IWDl~tg~~i~~il~~h 1823 (2004)
+.++.||+|.-|...-......... .... . ....-..++.. .+++|++ --..++|.++|-.-.... .....
T Consensus 104 if~tEdGTisaW~p~v~~t~~~~~~-~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~--~~g~F 180 (336)
T TIGR03118 104 LFVTEDGTLSGWAPALGTTRMTRAE-IVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPP--LPGSF 180 (336)
T ss_pred EEEeCCceEEeecCcCCcccccccE-EEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCcccccc--CCCCc
Confidence 7788999999998543211000011 1111 1 12222333333 1233333 335688888875432211 00000
Q ss_pred cC----------CeE---------EEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEe--cCCCCeEEEEEeC------
Q psy8748 1824 IG----------DVV---------SISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFF--GHEADVNSVCFHP------ 1876 (2004)
Q Consensus 1824 ~~----------~It---------sLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~--~h~s~ItsIafSP------ 1876 (2004)
.+ .|. -..-.+++..=+.|..-|.|-+||.. +..++++. +.-...+.|+..|
T Consensus 181 ~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~FG~~ 259 (336)
T TIGR03118 181 IDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPESFGSL 259 (336)
T ss_pred cCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeChhhhCCC
Confidence 00 111 11112222222233445789999974 66666662 2223456777765
Q ss_pred CCCEEEEEECCCeEEEEEccCCceeEEEcCCCC----CCCeEEEEEcC
Q psy8748 1877 SGLAFATGSEDKTARLFDIRADQQIATYLPPNK----NSGFTSCAVSS 1920 (2004)
Q Consensus 1877 dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~----~s~ItsLafSP 1920 (2004)
.+.+|+---.||+|..||..+++.+..+..... ...++.+.|..
T Consensus 260 sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 260 SGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred CCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence 456677666799999999999888776643322 12345666654
No 456
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=83.24 E-value=17 Score=49.23 Aligned_cols=145 Identities=9% Similarity=0.081 Sum_probs=89.2
Q ss_pred CCEEEEEECCCeEEEEECCCCeEEE------EEe----------------cCCCCeEEEEEeC--CCCEEEEEECCCeEE
Q psy8748 1836 GQYFVTGSVDKSCKLWDFREKKCVQ------TFF----------------GHEADVNSVCFHP--SGLAFATGSEDKTAR 1891 (2004)
Q Consensus 1836 g~~LaSGS~DGsIrIWDlrs~k~I~------tl~----------------~h~s~ItsIafSP--dg~~LaSgS~DGtIr 1891 (2004)
+++++++. .+.|.||+.+...... .+. .....|+.|.... +...|+.+..||.|.
T Consensus 49 ~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVLl~c~DdG~V~ 127 (717)
T PF08728_consen 49 RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVLLLCTDDGDVL 127 (717)
T ss_pred CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEEEEEecCCeEE
Confidence 56666655 6789999876322111 110 0112355554433 456789999999999
Q ss_pred EEEccC-------C----ce-e-----EEEcCCCCCCCeEEEEEc--CCCCEEEEEeCCCeEEEEECCCC--eee-EEEc
Q psy8748 1892 LFDIRA-------D----QQ-I-----ATYLPPNKNSGFTSCAVS--SSGRYIFCGSDDNNVHVWDLLKT--THN-GVLS 1949 (2004)
Q Consensus 1892 IWDLrt-------g----k~-i-----~t~~~~~~~s~ItsLafS--PdG~~LaSGSsDGsIrIWDL~tg--e~l-~tL~ 1949 (2004)
+|.+++ . +. . .-+........++.++++ ...++||+++....|.||-.... +.. ..-.
T Consensus 128 ~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l~~~r~~~~~s~ 207 (717)
T PF08728_consen 128 AYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFALVDERFYHVPSH 207 (717)
T ss_pred EEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEEEEecccccccccccc
Confidence 997631 1 00 0 000011223467889998 78899999988888888865432 111 1112
Q ss_pred cCCCCeEEEEEcCCC-----C-EEEEEECCCeEEEEEC
Q psy8748 1950 GHENRVTSISLSPNG-----M-ALVTSSWDQFVKVWQE 1981 (2004)
Q Consensus 1950 gHs~~VtsLaFSPDg-----~-~LaSgS~DGtIrIWdl 1981 (2004)
.|...|-+|+|-++. . .|++++-.|.+.+|++
T Consensus 208 ~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 208 QHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred ccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 366789999996632 2 7888889999999888
No 457
>COG3292 Predicted periplasmic ligand-binding sensor domain [Signal transduction mechanisms]
Probab=82.85 E-value=50 Score=43.49 Aligned_cols=271 Identities=15% Similarity=0.118 Sum_probs=138.9
Q ss_pred ccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCC-CceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCC
Q psy8748 1692 INKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRS-AWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTG 1770 (2004)
Q Consensus 1692 t~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht-~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~ 1770 (2004)
..+|..+.+.-+|. +..|+.|| +..||..+++..+.-.... ..|..+.-+-.| .+.+|+.+| |.+.+.+......
T Consensus 164 d~~V~aLv~D~~g~-lWvgT~dG-L~~fd~~~gkalql~s~~~dk~I~al~~d~qg-~LWVGTdqG-v~~~e~~G~~~sn 239 (671)
T COG3292 164 DTPVVALVFDANGR-LWVGTPDG-LSYFDAGRGKALQLASPPLDKAINALIADVQG-RLWVGTDQG-VYLQEAEGWRASN 239 (671)
T ss_pred CccceeeeeeccCc-EEEecCCc-ceEEccccceEEEcCCCcchhhHHHHHHHhcC-cEEEEeccc-eEEEchhhccccc
Confidence 45788888887775 66677777 7778888888776554433 556555544444 566777777 6666654311100
Q ss_pred cceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccc--cCCeEEEEECCCCCEEEEEECCCeE
Q psy8748 1771 AAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAH--IGDVVSISLSPDGQYFVTGSVDKSC 1848 (2004)
Q Consensus 1771 ~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h--~~~ItsLafSPdg~~LaSGS~DGsI 1848 (2004)
.. ..-..+.|..+.-...+.+-.|+.+|..+.--.+.+-.. ...+.| -..|.++..+.+|+ +.+++.+|.+
T Consensus 240 ~~-----~~lp~~~I~ll~qD~qG~lWiGTenGl~r~~l~rq~Lq~-~~~~~~l~~S~vnsL~~D~dGs-LWv~t~~giv 312 (671)
T COG3292 240 WG-----PMLPSGNILLLVQDAQGELWIGTENGLWRTRLPRQGLQI-PLSKMHLGVSTVNSLWLDTDGS-LWVGTYGGIV 312 (671)
T ss_pred cC-----CCCcchheeeeecccCCCEEEeecccceeEecCCCCccc-cccccCCccccccceeeccCCC-EeeeccCceE
Confidence 00 001122333333334566777777775543322222221 111112 22355565555665 6777777766
Q ss_pred EEEECCCCeEEEEEecCCC-CeEEEEEeC--CCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEE
Q psy8748 1849 KLWDFREKKCVQTFFGHEA-DVNSVCFHP--SGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYI 1925 (2004)
Q Consensus 1849 rIWDlrs~k~I~tl~~h~s-~ItsIafSP--dg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~L 1925 (2004)
++-+- .......+....+ .+...+..| .+..+.....-|.+.+-+-.++....... ......|+..++..+|+.
T Consensus 313 ~~~~a-~w~~ma~in~~dG~v~~~~~~a~~ll~~~v~~~ns~g~L~van~stG~~v~sv~-q~Rg~nit~~~~d~~g~l- 389 (671)
T COG3292 313 RYLTA-DWKRMAVINDSDGGVSQYEAVAPALLSWGVRQLNSIGELMVANGSTGELVRSVH-QLRGMNITTTLEDSRGRL- 389 (671)
T ss_pred EEecc-hhhheeeeecCCCchhhhhccCchhcccceeeccccceEEEecCCCCcEEEEee-eccccccchhhhccCCcE-
Confidence 65442 2222222222211 111112222 12222223333344444445555544421 222355777777775554
Q ss_pred EEEeCCCeEEEEECCC-CeeeEEEcc-CCCCeEEEEEcCCCCEEEEEECCCeEE
Q psy8748 1926 FCGSDDNNVHVWDLLK-TTHNGVLSG-HENRVTSISLSPNGMALVTSSWDQFVK 1977 (2004)
Q Consensus 1926 aSGSsDGsIrIWDL~t-ge~l~tL~g-Hs~~VtsLaFSPDg~~LaSgS~DGtIr 1977 (2004)
-.|+...-+..|+-.+ +.......+ ..++|..+.=.|+++ |..|+.+|.++
T Consensus 390 Wlgs~q~GLsrl~n~n~~avlde~agl~ss~V~aived~dns-LWIGTs~Glvk 442 (671)
T COG3292 390 WLGSMQNGLSRLDNKNEWAVLDEDAGLPSSEVSAIVEDPDNS-LWIGTSGGLVK 442 (671)
T ss_pred EEEecccchhhhccCCcccccccccCCcccceeeeeecCCCC-EEEeccCCeEe
Confidence 4445543366666655 333333322 356788888888888 77788788554
No 458
>KOG1916|consensus
Probab=82.59 E-value=1.5 Score=58.52 Aligned_cols=136 Identities=17% Similarity=0.190 Sum_probs=70.4
Q ss_pred CeEEEEECCCCce-EEEeeCCCCceEEEEEec-CCCEEEEeecCCeEEEEEcCCCCCCCcce-EEEEEecCccc---eee
Q psy8748 1714 GKLIIWDTWTGNK-TQVIPLRSAWVMSVAFAQ-SGNFVACGGMDNMCTVYDLNNRDSTGAAK-VIRELLGYEGF---LSS 1787 (2004)
Q Consensus 1714 GtIrVWDl~Tgk~-l~ti~~Ht~~ItsLafSP-dg~~LaSGS~DGtIrVWDl~t~~~~~~~k-~i~sl~gh~~~---Vss 1787 (2004)
+.+++-+..+.-. ...+++..+.|-.+.|-. +...+. -.-|...||+++--+...... .+......... |..
T Consensus 111 ~~vrvaN~~~sm~~~~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~l~G~iq~~l~v~~~~p~gs~~~~V~w 188 (1283)
T KOG1916|consen 111 NGVRVANQEPSMRHNELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDVLQGEIQPQLEVTPITPYGSDPQLVSW 188 (1283)
T ss_pred hhhhhccCcchhHHHHHHhcCCCCcccccccccCChHHH--HHhhhhheeehHhhccccccceEEeecCcCCCCcceeee
Confidence 4455555433221 112345556666666632 111111 223667888876422111111 11222222222 333
Q ss_pred eEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEE-----------ECCCCCEEEEEECCCeEEEEEC
Q psy8748 1788 CRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSIS-----------LSPDGQYFVTGSVDKSCKLWDF 1853 (2004)
Q Consensus 1788 vafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLa-----------fSPdg~~LaSGS~DGsIrIWDl 1853 (2004)
+-|. ...++..+-.+|.|++.++++... .++.+|...++.++ .+|||..|+.+..||.++.|.+
T Consensus 189 cp~~~~~~~ic~~~~~~~i~lL~~~ra~~--~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qi 264 (1283)
T KOG1916|consen 189 CPIAVNKVYICYGLKGGEIRLLNINRALR--SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQI 264 (1283)
T ss_pred cccccccceeeeccCCCceeEeeechHHH--HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeee
Confidence 3333 334566677788888887765443 34455766665544 5778888888888888777764
No 459
>PRK10115 protease 2; Provisional
Probab=82.36 E-value=2.2e+02 Score=39.41 Aligned_cols=244 Identities=13% Similarity=0.015 Sum_probs=118.6
Q ss_pred CceEEEEEecCCCEEEEeecC-----CeEEEEEcCCCCCCCcceEEEEEecCccceeeeEEeC-CCcEEEeec-C-----
Q psy8748 1735 AWVMSVAFAQSGNFVACGGMD-----NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID-DTTLLTGSG-D----- 1802 (2004)
Q Consensus 1735 ~~ItsLafSPdg~~LaSGS~D-----GtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vssvafsd-d~~LlSgS~-D----- 1802 (2004)
-.+..+.|+|+|++|+.+... ..|++.|+.++... ...+.+. -..+.|.+ ++.|+.+.. +
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l-----~~~i~~~---~~~~~w~~D~~~~~y~~~~~~~~~~ 198 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWY-----PELLDNV---EPSFVWANDSWTFYYVRKHPVTLLP 198 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCC-----CccccCc---ceEEEEeeCCCEEEEEEecCCCCCC
Confidence 346778899999988775432 36778888654311 1111111 13467774 334444332 2
Q ss_pred CeEEEEECCCCce-eEEeeccccCCeE-EEEECCCCCEEEEEEC---CCeEEEEECC--CCeEEEEEecCCCCeEEEEEe
Q psy8748 1803 MKIVTWNLETGQR-IHEVAQAHIGDVV-SISLSPDGQYFVTGSV---DKSCKLWDFR--EKKCVQTFFGHEADVNSVCFH 1875 (2004)
Q Consensus 1803 GtI~IWDl~tg~~-i~~il~~h~~~It-sLafSPdg~~LaSGS~---DGsIrIWDlr--s~k~I~tl~~h~s~ItsIafS 1875 (2004)
..|+.+++.++.. ...++........ ....+.++++++..+. ++.+.+|+.. .+.....+.........+. +
T Consensus 199 ~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~ 277 (686)
T PRK10115 199 YQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD-H 277 (686)
T ss_pred CEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE-e
Confidence 4788889988732 1123332222233 3344547887665543 3468888843 3332222222222222222 2
Q ss_pred CCCCEEEEEECC----CeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEE--ECCCCeeeEEEc
Q psy8748 1876 PSGLAFATGSED----KTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVW--DLLKTTHNGVLS 1949 (2004)
Q Consensus 1876 Pdg~~LaSgS~D----GtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIW--DL~tge~l~tL~ 1949 (2004)
.. ..++.-+.. ..|...++........+........+..+.+. .+.++++...+|.-+++ +...+ ....+.
T Consensus 278 ~~-~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~l~~~~~~~g~~~l~~~~~~~~-~~~~l~ 354 (686)
T PRK10115 278 YQ-HRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF-TDWLVVEERQRGLTSLRQINRKTR-EVIGIA 354 (686)
T ss_pred CC-CEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE-CCEEEEEEEeCCEEEEEEEcCCCC-ceEEec
Confidence 23 333333322 23444454421122233333233467777776 34555666667765554 44332 333333
Q ss_pred -cCCCCeEEEEEc--CCC-CEEEEEEC---CCeEEEEECCCCeEEEEEE
Q psy8748 1950 -GHENRVTSISLS--PNG-MALVTSSW---DQFVKVWQESNTIVWKVLK 1991 (2004)
Q Consensus 1950 -gHs~~VtsLaFS--PDg-~~LaSgS~---DGtIrIWdlstg~l~k~Ik 1991 (2004)
.....+..+.++ +++ .++++.+. -+.+..||..+++ +..+.
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~-~~~l~ 402 (686)
T PRK10115 355 FDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE-RRVLK 402 (686)
T ss_pred CCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc-EEEEE
Confidence 222233334444 333 34444433 4778888988764 34443
No 460
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=81.99 E-value=53 Score=40.95 Aligned_cols=158 Identities=20% Similarity=0.343 Sum_probs=94.2
Q ss_pred cCCeEEEEECCCCCEEEEEECCCe------EEEEECCC--C--eEEE-----EEecCCC--------CeEEEEEeCCCCE
Q psy8748 1824 IGDVVSISLSPDGQYFVTGSVDKS------CKLWDFRE--K--KCVQ-----TFFGHEA--------DVNSVCFHPSGLA 1880 (2004)
Q Consensus 1824 ~~~ItsLafSPdg~~LaSGS~DGs------IrIWDlrs--~--k~I~-----tl~~h~s--------~ItsIafSPdg~~ 1880 (2004)
-+.+..+.+.+++..+++.+.+|. +..+++.. + ..+. .+....+ ..-+|++.++|.+
T Consensus 19 ~GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~ 98 (326)
T PF13449_consen 19 FGGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSF 98 (326)
T ss_pred cCcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCE
Confidence 456788899876667777777777 66665543 1 1111 1111111 3447888778877
Q ss_pred EEEEECC------CeEEEEEccCCceeEEEcC-------------CCCCCCeEEEEEcCCCCEEEEEeC-----CC--e-
Q psy8748 1881 FATGSED------KTARLFDIRADQQIATYLP-------------PNKNSGFTSCAVSSSGRYIFCGSD-----DN--N- 1933 (2004)
Q Consensus 1881 LaSgS~D------GtIrIWDLrtgk~i~t~~~-------------~~~~s~ItsLafSPdG~~LaSGSs-----DG--s- 1933 (2004)
+++.=.+ ..|..++.. |+....+.. ...+..+-.++++|+|+.|+++.. |+ .
T Consensus 99 ~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~ 177 (326)
T PF13449_consen 99 WISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRAN 177 (326)
T ss_pred EEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCcccc
Confidence 7766556 678888876 665544421 123456889999999997766543 22 1
Q ss_pred ------EEE--EECCC-CeeeE----EEcc-----CCCCeEEEEEcCCCCEEEEEE-----CCCeEEEEECC
Q psy8748 1934 ------VHV--WDLLK-TTHNG----VLSG-----HENRVTSISLSPNGMALVTSS-----WDQFVKVWQES 1982 (2004)
Q Consensus 1934 ------IrI--WDL~t-ge~l~----tL~g-----Hs~~VtsLaFSPDg~~LaSgS-----~DGtIrIWdls 1982 (2004)
+++ ||..+ +.... .+.. ....|+.+.+-+++++|+-== ....++|+.+.
T Consensus 178 ~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~~~~~~~~~~ri~~v~ 249 (326)
T PF13449_consen 178 PDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERDFSPGTGNYKRIYRVD 249 (326)
T ss_pred cccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEccCCCCccceEEEEEEE
Confidence 444 45443 32222 2222 356799999999998766531 23456666544
No 461
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=81.93 E-value=22 Score=48.78 Aligned_cols=29 Identities=21% Similarity=0.303 Sum_probs=21.6
Q ss_pred cCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q psy8748 1824 IGDVVSISLSPDGQYFVTGSVDKSCKLWDF 1853 (2004)
Q Consensus 1824 ~~~ItsLafSPdg~~LaSGS~DGsIrIWDl 1853 (2004)
...|..+.++++|.+++..|..| |.|..+
T Consensus 84 ~f~v~~i~~n~~g~~lal~G~~~-v~V~~L 112 (717)
T PF10168_consen 84 LFEVHQISLNPTGSLLALVGPRG-VVVLEL 112 (717)
T ss_pred ceeEEEEEECCCCCEEEEEcCCc-EEEEEe
Confidence 34688899999999999988765 444433
No 462
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=81.83 E-value=23 Score=48.09 Aligned_cols=104 Identities=12% Similarity=0.118 Sum_probs=71.3
Q ss_pred CCCcEEEeecCCeEEEEECCC-------C----ce-------eEEeeccccCCeEEEEEC--CCCCEEEEEECCCeEEEE
Q psy8748 1792 DDTTLLTGSGDMKIVTWNLET-------G----QR-------IHEVAQAHIGDVVSISLS--PDGQYFVTGSVDKSCKLW 1851 (2004)
Q Consensus 1792 dd~~LlSgS~DGtI~IWDl~t-------g----~~-------i~~il~~h~~~ItsLafS--Pdg~~LaSGS~DGsIrIW 1851 (2004)
....++++.+||.|.+|..++ . .. ...+.......+++++++ ...++||+++....|.+|
T Consensus 113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVF 192 (717)
T PF08728_consen 113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVF 192 (717)
T ss_pred CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEEecCCceEEEE
Confidence 556789999999999996521 1 00 001222344578999998 788899999988888887
Q ss_pred ECCCC--eE-EEEEecCCCCeEEEEEeCCC---C---EEEEEECCCeEEEEEc
Q psy8748 1852 DFREK--KC-VQTFFGHEADVNSVCFHPSG---L---AFATGSEDKTARLFDI 1895 (2004)
Q Consensus 1852 Dlrs~--k~-I~tl~~h~s~ItsIafSPdg---~---~LaSgS~DGtIrIWDL 1895 (2004)
-.... +. ...-..+...|.+|+|.++. . ++++++-.|.+.+|++
T Consensus 193 af~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 193 AFALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 65431 11 11111356789999998743 2 7888999999999888
No 463
>KOG3630|consensus
Probab=81.74 E-value=12 Score=51.98 Aligned_cols=130 Identities=13% Similarity=0.071 Sum_probs=82.6
Q ss_pred EEeecCCeEEEEECCCCceeE----E------eeccccCCeEEEEECCCC-CEEEEEECCCeEEEEECCCCeEEEEEecC
Q psy8748 1797 LTGSGDMKIVTWNLETGQRIH----E------VAQAHIGDVVSISLSPDG-QYFVTGSVDKSCKLWDFREKKCVQTFFGH 1865 (2004)
Q Consensus 1797 lSgS~DGtI~IWDl~tg~~i~----~------il~~h~~~ItsLafSPdg-~~LaSGS~DGsIrIWDlrs~k~I~tl~~h 1865 (2004)
+..+.+-.|..||+++-..-. . ..........++.|+|.- ...++...|+.|++..+........-...
T Consensus 118 ~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s~p~ 197 (1405)
T KOG3630|consen 118 VSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTSFPV 197 (1405)
T ss_pred EEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhcccCc
Confidence 334445578999987532211 1 111223446678888843 24566778899998877644332222244
Q ss_pred CCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCC--CCCCeEEEEEcCCCCEEEE
Q psy8748 1866 EADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPN--KNSGFTSCAVSSSGRYIFC 1927 (2004)
Q Consensus 1866 ~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~--~~s~ItsLafSPdG~~LaS 1927 (2004)
....+|++|+|.|+.++.|-..|++.-|... +.....+..+. ....|.+++|-....++++
T Consensus 198 t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~Wl~t~eflvv 260 (1405)
T KOG3630|consen 198 TNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVTWLSTQEFLVV 260 (1405)
T ss_pred ccceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEEEecceeEEEE
Confidence 5678999999999999999999999999754 33222322111 1367889999877766664
No 464
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=81.56 E-value=14 Score=47.46 Aligned_cols=144 Identities=17% Similarity=0.241 Sum_probs=88.4
Q ss_pred CCCEEE-EEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCC-------EEEEEECCCeEEEEEccC-CceeEEEc
Q psy8748 1835 DGQYFV-TGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGL-------AFATGSEDKTARLFDIRA-DQQIATYL 1905 (2004)
Q Consensus 1835 dg~~La-SGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~-------~LaSgS~DGtIrIWDLrt-gk~i~t~~ 1905 (2004)
+..+++ .|+....++-.|+..|+.+..+..|..- -+.|.|+.+ .-++|-.+..|.-.|.+- |..+....
T Consensus 478 dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrIDPR~~gNKi~v~e 555 (776)
T COG5167 478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRIDPRARGNKIKVVE 555 (776)
T ss_pred CcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEecccccCCceeeee
Confidence 334333 3455567888888888888888776654 466766432 123444566666666553 22222111
Q ss_pred CC--CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1906 PP--NKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1906 ~~--~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
.. .......+..- ....|+++|+..|.|++||.-.-.....+.+-...|..+..+.+|+++++.+. ..+.+-|+.
T Consensus 556 sKdY~tKn~Fss~~t-TesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~~ 632 (776)
T COG5167 556 SKDYKTKNKFSSGMT-TESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLTDVP 632 (776)
T ss_pred ehhcccccccccccc-ccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeec-ceEEEEecc
Confidence 11 11122233322 34568999999999999996544444556777889999999999998777663 456666654
No 465
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=79.74 E-value=78 Score=39.07 Aligned_cols=109 Identities=12% Similarity=0.155 Sum_probs=52.8
Q ss_pred CCCEEEEEeCC-----CeEEEEECCCCceE---EEeeCCCCce--EEEEEecCCCEEEEeecC-----CeEEEEEcCCCC
Q psy8748 1703 DSRHCVSGSLD-----GKLIIWDTWTGNKT---QVIPLRSAWV--MSVAFAQSGNFVACGGMD-----NMCTVYDLNNRD 1767 (2004)
Q Consensus 1703 DG~~LASGS~D-----GtIrVWDl~Tgk~l---~ti~~Ht~~I--tsLafSPdg~~LaSGS~D-----GtIrVWDl~t~~ 1767 (2004)
++..++.||.+ ..+..+|+.+.+.. ..+..-..+. .+++. -++...+.|+.. ..+..||..+..
T Consensus 72 ~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~-~~~~iYv~GG~~~~~~~~~v~~yd~~~~~ 150 (323)
T TIGR03548 72 ENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACY-KDGTLYVGGGNRNGKPSNKSYLFNLETQE 150 (323)
T ss_pred CCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEE-ECCEEEEEeCcCCCccCceEEEEcCCCCC
Confidence 45666777754 35667777665531 2221111111 12222 256677777642 357777776542
Q ss_pred CCCcceEEEEEecCccceeeeEEeCCCcEEEeecCC----eEEEEECCCCcee
Q psy8748 1768 STGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDM----KIVTWNLETGQRI 1816 (2004)
Q Consensus 1768 ~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DG----tI~IWDl~tg~~i 1816 (2004)
......+......-..+....+..++.|+.++ .+..||..+.+..
T Consensus 151 ----W~~~~~~p~~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W~ 199 (323)
T TIGR03548 151 ----WFELPDFPGEPRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQWQ 199 (323)
T ss_pred ----eeECCCCCCCCCCcceEEEECCEEEEEcCCCCccccceEEEecCCCeeE
Confidence 22222111111111223334555666676653 3568898876643
No 466
>PRK13979 DNA topoisomerase IV subunit A; Provisional
Probab=79.40 E-value=3.1e+02 Score=39.35 Aligned_cols=156 Identities=5% Similarity=-0.060 Sum_probs=85.5
Q ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCceE----EEee-CCCCceEEEEEecCCCEEEEeecCCe---EEEEEcCCCCCCC
Q psy8748 1699 HYSGDSRHCVSGSLDGKLIIWDTWTGNKT----QVIP-LRSAWVMSVAFAQSGNFVACGGMDNM---CTVYDLNNRDSTG 1770 (2004)
Q Consensus 1699 aFSPDG~~LASGS~DGtIrVWDl~Tgk~l----~ti~-~Ht~~ItsLafSPdg~~LaSGS~DGt---IrVWDl~t~~~~~ 1770 (2004)
.+-++...+++.+.+|.|+--...+.+.. .... ...+.+..+.-......++.-+..|. +++|++.......
T Consensus 511 dlI~~E~v~v~lS~~GyIKr~~~~~~~~q~~g~~~~~~ke~D~i~~~~~~~T~d~LL~FTn~Gkvy~ikvy~IPe~~~~~ 590 (957)
T PRK13979 511 ELIVVEDVVITLSNEGFIKRIPLKSYNRSNSNVEDIEYREGDFNKFLIQSNTKDTLLIFTDKGNMYQIKGINIPEFKWKE 590 (957)
T ss_pred HcCCCcceEEEEecCCEEEEccccccccccccccccccCCCCceEEEEEEcCCCEEEEEECCCeEEEEEeeeCCCCCcCC
Confidence 34567888899999999887765432111 1110 12244555444444555555555664 5677776654333
Q ss_pred cceEEEEEec----Cccceee-eEE---eCCCcEEEeecCCeEEEEECCCCce----eEEeeccccCCeEEEEECCCC--
Q psy8748 1771 AAKVIRELLG----YEGFLSS-CRF---IDDTTLLTGSGDMKIVTWNLETGQR----IHEVAQAHIGDVVSISLSPDG-- 1836 (2004)
Q Consensus 1771 ~~k~i~sl~g----h~~~Vss-vaf---sdd~~LlSgS~DGtI~IWDl~tg~~----i~~il~~h~~~ItsLafSPdg-- 1836 (2004)
.+..+..+.. ....+.. +.. .++.+++.++..|.|+...+..-.. ...+.-...+.+.++.+...+
T Consensus 591 ~G~~I~nll~~~~~~~EkIv~i~~~~ef~~~~~lv~~Tk~G~VKrt~L~ef~~~r~~~~aikL~e~DeLV~v~~~~~~~~ 670 (957)
T PRK13979 591 KGERLDEIIKGIDLESEKIIEAYSIEDFTPQKDFIFITDSGGIKKTSLDKFVTNYTKLMALKLKKGEKLIKVKLVDRTRE 670 (957)
T ss_pred CCeEHHHhhhccCCCCCeEEEEEEeccCCCCCEEEEEECCCeEEEEehhhccccccceEEEEcCCCCEEEEEEEcCCCCC
Confidence 3443333321 1233333 333 2345688999999999987743221 111112234455555555432
Q ss_pred -CEEEEEECCCeEEEEECC
Q psy8748 1837 -QYFVTGSVDKSCKLWDFR 1854 (2004)
Q Consensus 1837 -~~LaSGS~DGsIrIWDlr 1854 (2004)
..++..+..|....|+..
T Consensus 671 ~~~Iil~Tk~G~airF~~~ 689 (957)
T PRK13979 671 EKFIKIKTKKGLSFTVEEP 689 (957)
T ss_pred CCEEEEEeCCCcEEEEEHH
Confidence 568888888888888764
No 467
>PLN02193 nitrile-specifier protein
Probab=79.36 E-value=1.8e+02 Score=38.22 Aligned_cols=190 Identities=13% Similarity=0.078 Sum_probs=89.3
Q ss_pred CCEEEEEeCC-------CeEEEEECCCCceEEEeeCC---CC--ceEEEEEecCCCEEEEeecCC-----eEEEEEcCCC
Q psy8748 1704 SRHCVSGSLD-------GKLIIWDTWTGNKTQVIPLR---SA--WVMSVAFAQSGNFVACGGMDN-----MCTVYDLNNR 1766 (2004)
Q Consensus 1704 G~~LASGS~D-------GtIrVWDl~Tgk~l~ti~~H---t~--~ItsLafSPdg~~LaSGS~DG-----tIrVWDl~t~ 1766 (2004)
+..++.||.+ ..+.+||+.+.+-.. .... .. ........-++..++.|+.++ .+..||..+.
T Consensus 176 ~~iyv~GG~~~~~~~~~~~v~~yD~~~~~W~~-~~~~g~~P~~~~~~~~~v~~~~~lYvfGG~~~~~~~ndv~~yD~~t~ 254 (470)
T PLN02193 176 NKIYSFGGEFTPNQPIDKHLYVFDLETRTWSI-SPATGDVPHLSCLGVRMVSIGSTLYVFGGRDASRQYNGFYSFDTTTN 254 (470)
T ss_pred CEEEEECCcCCCCCCeeCcEEEEECCCCEEEe-CCCCCCCCCCcccceEEEEECCEEEEECCCCCCCCCccEEEEECCCC
Confidence 4555666643 247788877654332 1110 00 111111223566777777653 5677777653
Q ss_pred CCCCcceEEEEEe--cCccceeeeEEeCCCcEEEeecC-----CeEEEEECCCCceeEEeec----cccCCeEEEEECCC
Q psy8748 1767 DSTGAAKVIRELL--GYEGFLSSCRFIDDTTLLTGSGD-----MKIVTWNLETGQRIHEVAQ----AHIGDVVSISLSPD 1835 (2004)
Q Consensus 1767 ~~~~~~k~i~sl~--gh~~~Vssvafsdd~~LlSgS~D-----GtI~IWDl~tg~~i~~il~----~h~~~ItsLafSPd 1835 (2004)
. ...+.... .....-.++...++..++.|+.+ ..+..||+.+.+....... ...... +++. -+
T Consensus 255 ~----W~~l~~~~~~P~~R~~h~~~~~~~~iYv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~~~~R~~~-~~~~-~~ 328 (470)
T PLN02193 255 E----WKLLTPVEEGPTPRSFHSMAADEENVYVFGGVSATARLKTLDSYNIVDKKWFHCSTPGDSFSIRGGA-GLEV-VQ 328 (470)
T ss_pred E----EEEcCcCCCCCCCccceEEEEECCEEEEECCCCCCCCcceEEEEECCCCEEEeCCCCCCCCCCCCCc-EEEE-EC
Confidence 2 12111110 01111122333455556666654 3467888877654321100 011111 2222 25
Q ss_pred CCEEEEEECC----CeEEEEECCCCeEEEEEec---CCCCeEEEEEeCCCCEEEEEECC--------------CeEEEEE
Q psy8748 1836 GQYFVTGSVD----KSCKLWDFREKKCVQTFFG---HEADVNSVCFHPSGLAFATGSED--------------KTARLFD 1894 (2004)
Q Consensus 1836 g~~LaSGS~D----GsIrIWDlrs~k~I~tl~~---h~s~ItsIafSPdg~~LaSgS~D--------------GtIrIWD 1894 (2004)
++.++.++.+ ..+.+||..+.+-...-.. ........+..-++++++.|+.+ ..+.+||
T Consensus 329 gkiyviGG~~g~~~~dv~~yD~~t~~W~~~~~~g~~P~~R~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ndv~~~D 408 (470)
T PLN02193 329 GKVWVVYGFNGCEVDDVHYYDPVQDKWTQVETFGVRPSERSVFASAAVGKHIVIFGGEIAMDPLAHVGPGQLTDGTFALD 408 (470)
T ss_pred CcEEEEECCCCCccCceEEEECCCCEEEEeccCCCCCCCcceeEEEEECCEEEEECCccCCccccccCccceeccEEEEE
Confidence 6777777755 4589999887654322110 11111111222356677777753 2478888
Q ss_pred ccCCce
Q psy8748 1895 IRADQQ 1900 (2004)
Q Consensus 1895 Lrtgk~ 1900 (2004)
+.+.+-
T Consensus 409 ~~t~~W 414 (470)
T PLN02193 409 TETLQW 414 (470)
T ss_pred cCcCEE
Confidence 876554
No 468
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=79.04 E-value=50 Score=42.44 Aligned_cols=32 Identities=19% Similarity=0.308 Sum_probs=25.5
Q ss_pred CCeEEEEEeCCCCEEEEEECCCeEEEEEccCC
Q psy8748 1867 ADVNSVCFHPSGLAFATGSEDKTARLFDIRAD 1898 (2004)
Q Consensus 1867 s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtg 1898 (2004)
..|.+++..+..+.+++.+.+|.|.+|++..+
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~~ 221 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGPG 221 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE-EEEEEE-SS
T ss_pred hceeeEEecCCcCEEEEEeCCCcEEEEEEeCC
Confidence 44889999998899999999999999999753
No 469
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=78.53 E-value=2.6e+02 Score=37.99 Aligned_cols=206 Identities=15% Similarity=0.080 Sum_probs=106.1
Q ss_pred ceeEEEEeCCCCEEEEE-----eCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCCCEEEEeecCC---eEEEEEcCC
Q psy8748 1694 KVNSVHYSGDSRHCVSG-----SLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDN---MCTVYDLNN 1765 (2004)
Q Consensus 1694 ~VtsLaFSPDG~~LASG-----S~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg~~LaSGS~DG---tIrVWDl~t 1765 (2004)
.+-.++.|||++++|-+ ...-++++-|+.+|+.....- .+...+++|.+|++.++-...|. .=++|.-.-
T Consensus 130 ~Lg~~~~s~D~~~la~s~D~~G~e~y~lr~kdL~tg~~~~d~i--~~~~~~~~Wa~d~~~lfYt~~d~~~rp~kv~~h~~ 207 (682)
T COG1770 130 SLGAASISPDHNLLAYSVDVLGDEQYTLRFKDLATGEELPDEI--TNTSGSFAWAADGKTLFYTRLDENHRPDKVWRHRL 207 (682)
T ss_pred eeeeeeeCCCCceEEEEEecccccEEEEEEEecccccccchhh--cccccceEEecCCCeEEEEEEcCCCCcceEEEEec
Confidence 35567788999888743 333568889999887654322 22356789999988776655442 234444333
Q ss_pred CCCCCcceEEEEEecCccceeeeEEeCCCcEEEeec---CCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEE-EE
Q psy8748 1766 RDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSG---DMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYF-VT 1841 (2004)
Q Consensus 1766 ~~~~~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~---DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~L-aS 1841 (2004)
+......+.+.......-.+.+-....+.+++.... .+.+++.+.+...............+.-- ....+.++ +-
T Consensus 208 gt~~~~d~lvyeE~d~~f~~~v~~s~s~~yi~i~~~~~~tsE~~ll~a~~p~~~p~vv~pr~~g~eY~-~eh~~d~f~i~ 286 (682)
T COG1770 208 GTPGSSDELVYEEKDDRFFLSVGRSRSEAYIVISLGSHITSEVRLLDADDPEAEPKVVLPRENGVEYS-VEHGGDRFYIL 286 (682)
T ss_pred CCCCCcceEEEEcCCCcEEEEeeeccCCceEEEEcCCCcceeEEEEecCCCCCceEEEEEcCCCcEEe-eeecCcEEEEE
Confidence 221222232333222222233333334455554442 35688888776554333322222111111 11123333 33
Q ss_pred EECCC-eEEEEECCC---CeEEEEEecCCCCeEEEEEeCCCCEEEEEECCC---eEEEEEccCCceeE
Q psy8748 1842 GSVDK-SCKLWDFRE---KKCVQTFFGHEADVNSVCFHPSGLAFATGSEDK---TARLFDIRADQQIA 1902 (2004)
Q Consensus 1842 GS~DG-sIrIWDlrs---~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DG---tIrIWDLrtgk~i~ 1902 (2004)
...+| ..+++.... ...-+.+..|...+.--.++--..+++....++ .|++++.+++....
T Consensus 287 sN~~gknf~l~~ap~~~~~~~w~~~I~h~~~~~l~~~~~f~~~lVl~eR~~glp~v~v~~~~~~~~~~ 354 (682)
T COG1770 287 SNADGKNFKLVRAPVSADKSNWRELIPHREDVRLEGVDLFADHLVLLERQEGLPRVVVRDRKTGEERG 354 (682)
T ss_pred ecCCCcceEEEEccCCCChhcCeeeeccCCCceeeeeeeeccEEEEEecccCCceEEEEecCCCceee
Confidence 33444 344444322 122234456766666555665566777665543 58888887665544
No 470
>KOG1900|consensus
Probab=77.02 E-value=17 Score=51.41 Aligned_cols=139 Identities=12% Similarity=0.219 Sum_probs=89.0
Q ss_pred ECCCeEEEEECCCCeEEEEEecCCCCeEEEEEe--------CCCCEEEEEECCCeEEEEEccCCce-------eEEEcCC
Q psy8748 1843 SVDKSCKLWDFREKKCVQTFFGHEADVNSVCFH--------PSGLAFATGSEDKTARLFDIRADQQ-------IATYLPP 1907 (2004)
Q Consensus 1843 S~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafS--------Pdg~~LaSgS~DGtIrIWDLrtgk~-------i~t~~~~ 1907 (2004)
+.|+.+.+|+.+++.....+.+....|..+..- |.=+++.+-+.--.|.++-+.-.+. ...+...
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~ 175 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS 175 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence 458899999999977777777777777766543 2223433333344566654321111 1112222
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC----CCC---e-e----------------eEEEc-cCCCCeEEEEEcC
Q psy8748 1908 NKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL----LKT---T-H----------------NGVLS-GHENRVTSISLSP 1962 (2004)
Q Consensus 1908 ~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL----~tg---e-~----------------l~tL~-gHs~~VtsLaFSP 1962 (2004)
..+..|.|+....+|+.+++| .|| .+|.+ ..+ + + +..+. .+.++|..++...
T Consensus 176 ~dg~~V~~I~~t~nGRIF~~G-~dg--~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~ID~ 252 (1311)
T KOG1900|consen 176 VDGVSVNCITYTENGRIFFAG-RDG--NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITIDN 252 (1311)
T ss_pred cCCceEEEEEeccCCcEEEee-cCC--CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEecc
Confidence 334668889888889888877 455 45543 111 1 0 01112 5677999999999
Q ss_pred CCCEEEEEECCCeEEEEECCCC
Q psy8748 1963 NGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1963 Dg~~LaSgS~DGtIrIWdlstg 1984 (2004)
....+.+-+..|+|++|++.+.
T Consensus 253 SR~IlY~lsek~~v~~Y~i~~~ 274 (1311)
T KOG1900|consen 253 SRNILYVLSEKGTVSAYDIGGN 274 (1311)
T ss_pred ccceeeeeccCceEEEEEccCC
Confidence 9999999999999999999873
No 471
>KOG2377|consensus
Probab=77.01 E-value=31 Score=44.06 Aligned_cols=141 Identities=12% Similarity=0.137 Sum_probs=88.4
Q ss_pred eeeEEeCCCcEEEeecCCeEEEEECCCC--ceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEE----
Q psy8748 1786 SSCRFIDDTTLLTGSGDMKIVTWNLETG--QRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCV---- 1859 (2004)
Q Consensus 1786 ssvafsdd~~LlSgS~DGtI~IWDl~tg--~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I---- 1859 (2004)
+.+.|.+.+..+.+...|.+.-|-.... .....+.....++|.++.|++|.+.+++--.|.+|.+++....+..
T Consensus 26 ngvFfDDaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~ 105 (657)
T KOG2377|consen 26 NGVFFDDANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYT 105 (657)
T ss_pred cceeeccCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHH
Confidence 4455666667666666677777765432 2222333455679999999999999999999999999997433321
Q ss_pred EEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEe
Q psy8748 1860 QTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGS 1929 (2004)
Q Consensus 1860 ~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGS 1929 (2004)
.+.+.....|.+.+|+.+. -++..+..| +.+|.....+..... ...+...|....|.++.+.+.-++
T Consensus 106 ~~ck~k~~~IlGF~W~~s~-e~A~i~~~G-~e~y~v~pekrslRl-Vks~~~nvnWy~yc~et~v~LL~t 172 (657)
T KOG2377|consen 106 QECKTKNANILGFCWTSST-EIAFITDQG-IEFYQVLPEKRSLRL-VKSHNLNVNWYMYCPETAVILLST 172 (657)
T ss_pred HHhccCcceeEEEEEecCe-eEEEEecCC-eEEEEEchhhhhhhh-hhhcccCccEEEEccccceEeeec
Confidence 2223344568999998764 455554444 666665433322211 123445677778888777655443
No 472
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=76.81 E-value=65 Score=37.78 Aligned_cols=180 Identities=14% Similarity=0.101 Sum_probs=97.6
Q ss_pred eeEEeCCCcEEEeec--CCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEE-EECCCeEEEEECCCCeEEEEEe
Q psy8748 1787 SCRFIDDTTLLTGSG--DMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVT-GSVDKSCKLWDFREKKCVQTFF 1863 (2004)
Q Consensus 1787 svafsdd~~LlSgS~--DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaS-GS~DGsIrIWDlrs~k~I~tl~ 1863 (2004)
.+.+.++..+.+.+. ...|+.||+.+|+.+....-. ...+..=-...-|.+++. .-.+|.-..+|.++-+++..+.
T Consensus 50 GL~~~~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~-~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~ 128 (262)
T COG3823 50 GLEYLDGHILESTGLYGFSKIRVSDLTTGQEIFSEKLA-PDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFS 128 (262)
T ss_pred ceeeeCCEEEEeccccccceeEEEeccCceEEEEeecC-CccccccceeeccceEEEEEeccceeEEEChHHhhhhcccc
Confidence 344445544555443 357999999999877554222 111111111112333333 3357888899988887776653
Q ss_pred cCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCe---EEEEEcCCCCEEEEEeCCCeEEEEECC
Q psy8748 1864 GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGF---TSCAVSSSGRYIFCGSDDNNVHVWDLL 1940 (2004)
Q Consensus 1864 ~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~I---tsLafSPdG~~LaSGSsDGsIrIWDL~ 1940 (2004)
..+.-+.++ .|+..++.+....+++.-|.++.....+........+| .-+.|- +|...|-.-.+..|...|..
T Consensus 129 -y~GeGWgLt--~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG~lyANVw~t~~I~rI~p~ 204 (262)
T COG3823 129 -YEGEGWGLT--SDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DGELYANVWQTTRIARIDPD 204 (262)
T ss_pred -cCCcceeee--cCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-ccEEEEeeeeecceEEEcCC
Confidence 234445554 35555666655666777776655444333221111222 222322 45555544445556666666
Q ss_pred CCeeeEEEc------------cCCCCeEEEEEcCCCCEEEEEE
Q psy8748 1941 KTTHNGVLS------------GHENRVTSISLSPNGMALVTSS 1971 (2004)
Q Consensus 1941 tge~l~tL~------------gHs~~VtsLaFSPDg~~LaSgS 1971 (2004)
+|+.+..+. .|.+..+.+++.|++..+...|
T Consensus 205 sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 205 SGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred CCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 776665442 3555678999999875444433
No 473
>KOG1983|consensus
Probab=76.75 E-value=40 Score=48.18 Aligned_cols=230 Identities=10% Similarity=0.017 Sum_probs=104.8
Q ss_pred cceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEeeCCC-CceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCCCc
Q psy8748 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRS-AWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGA 1771 (2004)
Q Consensus 1693 ~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti~~Ht-~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~~~ 1771 (2004)
.....++|+|.-+++|.|..+|.|+++....-+.....+... ..+..+.|-...........+..+.+|........
T Consensus 36 ~~~~~~afD~~q~llai~t~tg~i~~yg~~~ve~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~-- 113 (993)
T KOG1983|consen 36 STPSALAFDPTQGLLAIGTRTGAIKIYGQPGVEFVGLHPKQNQINVTRIELLVGISRNLVLSDDDSLHLWSIKIKTGV-- 113 (993)
T ss_pred CCCcceeeccccceEEEEEecccEEEecccceEEEeccccccchhhhheeeeecccccceeecccceeeeccccccee--
Confidence 356688999999999999999999999643322222111111 12222233222233333444555666655322100
Q ss_pred ceEEEEEecCccceeeeEEe-CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEE-EECCCCCEEEEEECCCeEE
Q psy8748 1772 AKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSI-SLSPDGQYFVTGSVDKSCK 1849 (2004)
Q Consensus 1772 ~k~i~sl~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsL-afSPdg~~LaSGS~DGsIr 1849 (2004)
-....+.+..-. +-.. +.| ..+.+++||..-.....-...+....-... .+.+..--+..--.+-.-.
T Consensus 114 --------~~~~~~~~~~~~~~~~~-~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 183 (993)
T KOG1983|consen 114 --------FLKQEITSFVTDPPPDW-LIG-ENGLVKVSDVLRHQLSDLKYAGTESSNFVPYESLSPTLSIEGLVIDLDTV 183 (993)
T ss_pred --------ecCCcceeccCCCCcch-hcc-cCceeeEeeechhhhccceeccccccccceeeeeccceeeeccccccccc
Confidence 001111111111 1112 344 778888888653322211111110000000 0000000000000000011
Q ss_pred EEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCCCCEEEEEe
Q psy8748 1850 LWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGS 1929 (2004)
Q Consensus 1850 IWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPdG~~LaSGS 1929 (2004)
.|.+.... ..+.-+..++.+..+...+... .+...+.+-+|+.........+...+.. +..++..++++.
T Consensus 184 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~v~~h 253 (993)
T KOG1983|consen 184 LISLPDAY--LGLSLIEYESLQVLYYSPTKIL-IGFNRGLVVIKDRASKYVQSAYLPNGQL-------ESRDGSHFVSYH 253 (993)
T ss_pred eeeccccc--ccccccccccceeeeecCCCcc-eeeeeeeeeehhcccccchhhccccccc-------CccCCceEEEEE
Confidence 11111111 1222344455555554444333 3444667777776544444444322221 178899999999
Q ss_pred CCCeEEEEECCCCee
Q psy8748 1930 DDNNVHVWDLLKTTH 1944 (2004)
Q Consensus 1930 sDGsIrIWDL~tge~ 1944 (2004)
.||.+.+||...+..
T Consensus 254 ~Dgs~~fWd~s~g~~ 268 (993)
T KOG1983|consen 254 TDGSYAFWDVSSGKL 268 (993)
T ss_pred ecCCEEeeecCCCce
Confidence 999999999988754
No 474
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=76.30 E-value=56 Score=44.23 Aligned_cols=259 Identities=11% Similarity=0.052 Sum_probs=118.0
Q ss_pred cccceeEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe-eCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCCCC
Q psy8748 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVI-PLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDST 1769 (2004)
Q Consensus 1691 Ht~~VtsLaFSPDG~~LASGS~DGtIrVWDl~Tgk~l~ti-~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~~~ 1769 (2004)
|-+.++.+.|.-++.-++..-.|-+ -.+....+ -.-...|-..+|+.|.+.++....+..|.+++-.-.. .
T Consensus 75 hf~~~~~~~f~~~~gDii~~~~dp~-------p~e~~~eivG~v~nGIvaa~wS~DE~~~cvvt~~r~il~~~k~fd~-i 146 (1243)
T COG5290 75 HFHVLTFEYFLIDEGDIIHLVNDPT-------PAELEMEIVGKVSNGIVAASWSADEKTWCVVTSTREILLFDKYFDP-I 146 (1243)
T ss_pred hhhhhheeeEEecCCcEEEEEcCCC-------cccchhhhhccccCceEEEeeccCCceEEEEEcCceEEEEeccccc-c
Confidence 6667778888766655555544432 11122222 2234568889999999988777777888887643110 0
Q ss_pred CcceEEEEEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeec----cccCCeEEEEECCCCCEEEEEECC
Q psy8748 1770 GAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQ----AHIGDVVSISLSPDGQYFVTGSVD 1845 (2004)
Q Consensus 1770 ~~~k~i~sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~----~h~~~ItsLafSPdg~~LaSGS~D 1845 (2004)
........-...-+.-..+-|.....-+-|-. -.-.+-|. .....+-. .-...=.-++|-.|..+.+++...
T Consensus 147 se~~L~~~dl~ef~khi~VgWgkketqfrgk~-~raqlrdp---tmp~~vD~G~l~avd~~k~~i~wrgD~~y~~v~r~E 222 (1243)
T COG5290 147 SEYHLKKSDLVEFGKHIRVGWGKKETQFRGKG-ARAQLRDP---TMPYMVDYGDLFAVDTNKKIIFWRGDTEYNLVGRSE 222 (1243)
T ss_pred chhhcchhHHHHhccceEeeecccchhccccc-hhhhccCC---CCcccccccceeEeeCCceEEEEccCcceeeecchh
Confidence 00000000000000111122221110000000 00011111 10000000 001111235565556666665432
Q ss_pred ----CeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEEEEECCCe-----EEEEEccCCceeEEE-cCCCCCCCeEE
Q psy8748 1846 ----KSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKT-----ARLFDIRADQQIATY-LPPNKNSGFTS 1915 (2004)
Q Consensus 1846 ----GsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGt-----IrIWDLrtgk~i~t~-~~~~~~s~Its 1915 (2004)
..+++|.. .|+.-..-....+.-..+.|-|.|..+++-+.||. |.++..+ |-.-..+ ...+....+..
T Consensus 223 e~prra~rvysr-eg~lds~sep~~g~e~~LSWkpqgS~~ati~td~~~~S~~ViFfErN-GLrHGef~lr~~~dEk~~~ 300 (1243)
T COG5290 223 ERPRRAFRVYSR-EGQLDSASEPVTGMEHQLSWKPQGSKYATIGTDGCSTSESVIFFERN-GLRHGEFDLRVGCDEKAFL 300 (1243)
T ss_pred cccccceeeecc-ccccccccCCcccchhccccccCCceeeeeccCCCCCcceEEEEccC-CcccCCccccCCchhhhhh
Confidence 23555542 22211111111222335789999999999876653 5555432 2111111 01112233455
Q ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCC
Q psy8748 1916 CAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNG 1964 (2004)
Q Consensus 1916 LafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg 1964 (2004)
.+|+-....++++ ..+.+.+|-..+..-.-...-.-..+.-+.|+|..
T Consensus 301 ~~wn~~s~vlav~-~~n~~~lwttkNyhWYLK~e~~ip~~s~vkwhpe~ 348 (1243)
T COG5290 301 ENWNLLSTVLAVA-EGNLLKLWTTKNYHWYLKVERQIPGISYVKWHPEE 348 (1243)
T ss_pred hhhhHHHHHHHHh-hcceEEEEEccceEEEEEEeecCCCcceeeecccc
Confidence 6666555555544 45679999877655444333344567778888843
No 475
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=75.24 E-value=2.6e+02 Score=36.21 Aligned_cols=142 Identities=11% Similarity=0.062 Sum_probs=78.5
Q ss_pred EEeCCCcEEEeecCCeEEE-EECCCCcee-EEeeccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCe-----EEEE
Q psy8748 1789 RFIDDTTLLTGSGDMKIVT-WNLETGQRI-HEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKK-----CVQT 1861 (2004)
Q Consensus 1789 afsdd~~LlSgS~DGtI~I-WDl~tg~~i-~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k-----~I~t 1861 (2004)
...+++.++..+..|.+.. ||- +... ..........++++.+.+++..++++ .+|.+.. ....++ ....
T Consensus 245 ~~~~dG~~~~vg~~G~~~~s~d~--G~~~W~~~~~~~~~~l~~v~~~~dg~l~l~g-~~G~l~~-S~d~G~~~~~~~f~~ 320 (398)
T PLN00033 245 NRSPDGDYVAVSSRGNFYLTWEP--GQPYWQPHNRASARRIQNMGWRADGGLWLLT-RGGGLYV-SKGTGLTEEDFDFEE 320 (398)
T ss_pred EEcCCCCEEEEECCccEEEecCC--CCcceEEecCCCccceeeeeEcCCCCEEEEe-CCceEEE-ecCCCCcccccceee
Confidence 3344555555555555433 332 2211 12223445678999999998877665 5565443 333332 1222
Q ss_pred Eec--CCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEc-CCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEE
Q psy8748 1862 FFG--HEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYL-PPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVW 1937 (2004)
Q Consensus 1862 l~~--h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~-~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIW 1937 (2004)
... ....+..+.|.+++..+++| .+|.+.... ..|+.-.... .......+..+.|.++++-+++| .+|.|.-|
T Consensus 321 ~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~G-~~G~il~~ 396 (398)
T PLN00033 321 ADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVLG-NDGVLLRY 396 (398)
T ss_pred cccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEEe-CCcEEEEe
Confidence 211 22358889999887766555 577665553 4444433322 12223567888988877766665 67776554
No 476
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=75.13 E-value=38 Score=43.70 Aligned_cols=146 Identities=16% Similarity=0.086 Sum_probs=91.3
Q ss_pred CCCCEEE-EEeCCCeEEEEECCCCceEEEeeCCCCceEEEEEecCC--------CEEEEeecCCeEEEEEcCCCCCCCcc
Q psy8748 1702 GDSRHCV-SGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSG--------NFVACGGMDNMCTVYDLNNRDSTGAA 1772 (2004)
Q Consensus 1702 PDG~~LA-SGS~DGtIrVWDl~Tgk~l~ti~~Ht~~ItsLafSPdg--------~~LaSGS~DGtIrVWDl~t~~~~~~~ 1772 (2004)
.|..+|. .|+....++-.|++.|+.+.....|... -+.|.|+. +.|+-.+ +..|.-.|.+-.. ...
T Consensus 477 ~dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS-~~svFrIDPR~~g--NKi 551 (776)
T COG5167 477 NDSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLS-DYSVFRIDPRARG--NKI 551 (776)
T ss_pred CCcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeec-ccceEEecccccC--Cce
Confidence 3444444 4566677888899999999999888775 46777753 2344334 4434333433221 111
Q ss_pred eEEE-EEecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCCeEEEE
Q psy8748 1773 KVIR-ELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLW 1851 (2004)
Q Consensus 1773 k~i~-sl~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DGsIrIW 1851 (2004)
.... .-.......++..-...+++++++..|.|++||.-. ....+.+.+....|..+..+.+|+++++.+. ..+.+.
T Consensus 552 ~v~esKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig-~rAKtalP~lG~aIk~idvta~Gk~ilaTCk-~yllL~ 629 (776)
T COG5167 552 KVVESKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIG-KRAKTALPGLGDAIKHIDVTANGKHILATCK-NYLLLT 629 (776)
T ss_pred eeeeehhccccccccccccccCceEEEecCCCceeeehhhc-chhhhcCcccccceeeeEeecCCcEEEEeec-ceEEEE
Confidence 1110 011112233444445678899999999999999643 3333455677788999999999998887764 577777
Q ss_pred ECC
Q psy8748 1852 DFR 1854 (2004)
Q Consensus 1852 Dlr 1854 (2004)
|++
T Consensus 630 d~~ 632 (776)
T COG5167 630 DVP 632 (776)
T ss_pred ecc
Confidence 765
No 477
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=74.03 E-value=1.3e+02 Score=41.94 Aligned_cols=182 Identities=11% Similarity=0.089 Sum_probs=105.9
Q ss_pred EEEeecCCeEEEEECCCCceeEEee-------ccccCCeEE--EEECCCCCEEEEEECC---CeEEEEECC---------
Q psy8748 1796 LLTGSGDMKIVTWNLETGQRIHEVA-------QAHIGDVVS--ISLSPDGQYFVTGSVD---KSCKLWDFR--------- 1854 (2004)
Q Consensus 1796 LlSgS~DGtI~IWDl~tg~~i~~il-------~~h~~~Its--LafSPdg~~LaSGS~D---GsIrIWDlr--------- 1854 (2004)
+++.+..|.+++|-.+......... ......|+. +++..+|+.+++++.+ +.|++|.+.
T Consensus 65 ~i~Vt~nG~l~l~yQ~~~~~~~~~s~~el~s~~~s~~~ithAsi~~~~~g~~ili~t~s~~s~~l~~yrv~I~W~~~~~~ 144 (753)
T PF11635_consen 65 CIAVTRNGLLKLWYQKPDGQWNESSTAELESLGSSDDLITHASIAPSDNGKSILIATYSSLSKQLRFYRVQIDWNAKPQQ 144 (753)
T ss_pred EEEEecCCeEEEEEEcCCCccceeehhhhccccccccceeeceeeecCCCCEEEEEEccccCCceEEEEEEEeccCcCcc
Confidence 6778889999999874332222221 113344554 4444677766666665 678887532
Q ss_pred -CCe--E---EEEEe-------c-----------CCCCeEEEEEeC-------CCCEEEEEEC----CCeEEEEEccCCc
Q psy8748 1855 -EKK--C---VQTFF-------G-----------HEADVNSVCFHP-------SGLAFATGSE----DKTARLFDIRADQ 1899 (2004)
Q Consensus 1855 -s~k--~---I~tl~-------~-----------h~s~ItsIafSP-------dg~~LaSgS~----DGtIrIWDLrtgk 1899 (2004)
+.+ + +.... . .-..++.+.|-+ ....+++.+. ...|..|.++...
T Consensus 145 ~d~q~~PSl~l~~~~~~~~~~~~~~~~~~~~~~~~~~~LthL~ils~~~~~~~~p~Ili~~~~~~~~~SiI~RweL~~~~ 224 (753)
T PF11635_consen 145 IDPQKLPSLFLSHIADETPKDVDPTGWGDPSPDNSMYQLTHLEILSPTPDKDSAPEILIVYSSPNTPSSIIERWELREEQ 224 (753)
T ss_pred CCCCcCCeEEEEeccccccccccCccccccCcccccccceeEEEeccCCCCCCCCeEEEEEEcCCCCCcEEEEEEEEccC
Confidence 000 0 00000 0 112556677765 1123444332 3469999986432
Q ss_pred e-eEEE-----------------------cCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEE----c--
Q psy8748 1900 Q-IATY-----------------------LPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVL----S-- 1949 (2004)
Q Consensus 1900 ~-i~t~-----------------------~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL----~-- 1949 (2004)
. +... ..-.....|.++....-+.+++....||+|.++|-.+.+.+... .
T Consensus 225 ~~lh~~F~ql~s~~~~~~~~~~~~~l~~~~~i~~~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~ 304 (753)
T PF11635_consen 225 QPLHPAFQQLGSKKNSSSEPPPTYRLRRLDDITLNKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPP 304 (753)
T ss_pred cccchhhhhcCCCCcCCCCCCCceeEEEecccccCCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCc
Confidence 1 1000 00111245667777777889999999999999998776554333 1
Q ss_pred -------------cCCCCeEEEEEcCCCCEEEEEECCCeEE
Q psy8748 1950 -------------GHENRVTSISLSPNGMALVTSSWDQFVK 1977 (2004)
Q Consensus 1950 -------------gHs~~VtsLaFSPDg~~LaSgS~DGtIr 1977 (2004)
.+-..+..++|||.+..++.-..||.+.
T Consensus 305 ~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~~~~~~~~ 345 (753)
T PF11635_consen 305 NTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQIDEDGKTK 345 (753)
T ss_pred cccccccccccccccCCCCceEEECcccceEEEEecCCCce
Confidence 0112344688999999999999999866
No 478
>KOG2247|consensus
Probab=73.78 E-value=0.66 Score=58.55 Aligned_cols=148 Identities=11% Similarity=0.175 Sum_probs=101.6
Q ss_pred cCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEecCCCCeEEEEEeCCCCEEE-EEECCCeEEEEEccCCceeE
Q psy8748 1824 IGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFA-TGSEDKTARLFDIRADQQIA 1902 (2004)
Q Consensus 1824 ~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~h~s~ItsIafSPdg~~La-SgS~DGtIrIWDLrtgk~i~ 1902 (2004)
........|-+++.-++.++.+..+..||-. ++.+... ...+....++|..++..++ .+-..+.+.+||+.+.....
T Consensus 34 lv~pi~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~-n~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqq 111 (615)
T KOG2247|consen 34 LVGPIIHRWRPEGHNLAVACANTIVIYYDKA-GQVILEL-NPTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQ 111 (615)
T ss_pred ccccceeeEecCCCceehhhhhhHHHhhhhh-cceeccc-CCchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHH
Confidence 3344456788877778889889899999953 3333333 2345566788888777644 34557889999997543322
Q ss_pred EEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEEEEEECCCeE
Q psy8748 1903 TYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFV 1976 (2004)
Q Consensus 1903 t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~LaSgS~DGtI 1976 (2004)
.-....+ .-.-..|++.+..++.|...|.+.|++..+.+.......|..++++++|.+.+. .+.++.|..+
T Consensus 112 LE~gg~~--s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~-vil~dcd~~L 182 (615)
T KOG2247|consen 112 LESGGTS--SKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDY-VILCDCDNTL 182 (615)
T ss_pred HhccCcc--hHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccce-eeecCcHHHH
Confidence 1111111 122378999999999999999999999887777666666999999999988764 5555555443
No 479
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=71.59 E-value=3e+02 Score=35.38 Aligned_cols=183 Identities=14% Similarity=0.274 Sum_probs=106.8
Q ss_pred CcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECC----CCCE--EEEEE-CC---CeEEEEECC--CCeEEEE
Q psy8748 1794 TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSP----DGQY--FVTGS-VD---KSCKLWDFR--EKKCVQT 1861 (2004)
Q Consensus 1794 ~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSP----dg~~--LaSGS-~D---GsIrIWDlr--s~k~I~t 1861 (2004)
..++....++-+.+||+.... +..+. .+.+..+..-. .|+. |++++ .+ ..|++|.+. ++. +..
T Consensus 69 SlIigTdK~~GL~VYdL~Gk~-lq~~~---~Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~~~g~-L~~ 143 (381)
T PF02333_consen 69 SLIIGTDKKGGLYVYDLDGKE-LQSLP---VGRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDPDTGE-LTD 143 (381)
T ss_dssp -EEEEEETTTEEEEEETTS-E-EEEE----SS-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEETTTTE-EEE
T ss_pred ceEEEEeCCCCEEEEcCCCcE-EEeec---CCCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecCCCCc-ceE
Confidence 356777778899999997544 33332 23333333211 2332 34444 32 469999765 343 333
Q ss_pred Eec-------CCCCeEEEEEe--C-CCC-EEEEEECCCeEEEEEcc---CC----ceeEEEcCCCCCCCeEEEEEcCCCC
Q psy8748 1862 FFG-------HEADVNSVCFH--P-SGL-AFATGSEDKTARLFDIR---AD----QQIATYLPPNKNSGFTSCAVSSSGR 1923 (2004)
Q Consensus 1862 l~~-------h~s~ItsIafS--P-dg~-~LaSgS~DGtIrIWDLr---tg----k~i~t~~~~~~~s~ItsLafSPdG~ 1923 (2004)
+.. ....+..+|+. + +|. ++++...+|.+..|.+. .+ +.+++|.. .+.+..|..+....
T Consensus 144 v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~---~sQ~EGCVVDDe~g 220 (381)
T PF02333_consen 144 VTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKV---GSQPEGCVVDDETG 220 (381)
T ss_dssp -CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE----SS-EEEEEEETTTT
T ss_pred cCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecC---CCcceEEEEecccC
Confidence 321 12346777774 3 344 56778889999888874 22 34566643 34688999999999
Q ss_pred EEEEEeCCCeEEEEECCC-----CeeeEEEcc--CCCCeEEEEEcC--CC-CE-EEEEECCCeEEEEECCCC
Q psy8748 1924 YIFCGSDDNNVHVWDLLK-----TTHNGVLSG--HENRVTSISLSP--NG-MA-LVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1924 ~LaSGSsDGsIrIWDL~t-----ge~l~tL~g--Hs~~VtsLaFSP--Dg-~~-LaSgS~DGtIrIWdlstg 1984 (2004)
+|+.|-++.-|+-|+.+. ++.+....+ ....|-.+++-. ++ .| |+|.-.+++..||+....
T Consensus 221 ~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~ 292 (381)
T PF02333_consen 221 RLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGP 292 (381)
T ss_dssp EEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT
T ss_pred CEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCC
Confidence 999999998888888752 222322222 346788888753 33 24 455555789999999864
No 480
>KOG4460|consensus
Probab=71.57 E-value=42 Score=43.58 Aligned_cols=26 Identities=19% Similarity=0.203 Sum_probs=20.4
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEE
Q psy8748 1826 DVVSISLSPDGQYFVTGSVDKSCKLW 1851 (2004)
Q Consensus 1826 ~ItsLafSPdg~~LaSGS~DGsIrIW 1851 (2004)
.|..+..++.|..++-.|.+|.+.++
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMe 130 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVME 130 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEE
Confidence 46678888999999988888865554
No 481
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=70.50 E-value=1e+02 Score=34.03 Aligned_cols=114 Identities=5% Similarity=0.098 Sum_probs=70.5
Q ss_pred EEEECCCCCEEEEEECCCeEEEEECCCCe--------EEEEEecCCCCeEEEEEeC-----CCCEEEEEECCCeEEEEEc
Q psy8748 1829 SISLSPDGQYFVTGSVDKSCKLWDFREKK--------CVQTFFGHEADVNSVCFHP-----SGLAFATGSEDKTARLFDI 1895 (2004)
Q Consensus 1829 sLafSPdg~~LaSGS~DGsIrIWDlrs~k--------~I~tl~~h~s~ItsIafSP-----dg~~LaSgS~DGtIrIWDL 1895 (2004)
.-.|......|++++..|.|.|++..... .+..+ .-...|++++-.+ +...|+.|+ ...+..||+
T Consensus 3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~L-Nin~~italaaG~l~~~~~~D~LliGt-~t~llaYDV 80 (136)
T PF14781_consen 3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFL-NINQEITALAAGRLKPDDGRDCLLIGT-QTSLLAYDV 80 (136)
T ss_pred EEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEE-ECCCceEEEEEEecCCCCCcCEEEEec-cceEEEEEc
Confidence 34566666788999999999999865332 23333 3456677776544 334577776 567999999
Q ss_pred cCCceeEEEcCCCCCCCeEEEEEcC----CCCEEEEEeCCCeEEEEECCCCeeeEEE
Q psy8748 1896 RADQQIATYLPPNKNSGFTSCAVSS----SGRYIFCGSDDNNVHVWDLLKTTHNGVL 1948 (2004)
Q Consensus 1896 rtgk~i~t~~~~~~~s~ItsLafSP----dG~~LaSGSsDGsIrIWDL~tge~l~tL 1948 (2004)
.....+.....+ ..+.++.+-. +...+++ +.+..|.-||..-.+...+.
T Consensus 81 ~~N~d~Fyke~~---DGvn~i~~g~~~~~~~~l~iv-GGncsi~Gfd~~G~e~fWtV 133 (136)
T PF14781_consen 81 ENNSDLFYKEVP---DGVNAIVIGKLGDIPSPLVIV-GGNCSIQGFDYEGNEIFWTV 133 (136)
T ss_pred ccCchhhhhhCc---cceeEEEEEecCCCCCcEEEE-CceEEEEEeCCCCcEEEEEe
Confidence 877665443222 4456665532 2344444 45677888886555554443
No 482
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=69.32 E-value=28 Score=44.18 Aligned_cols=159 Identities=13% Similarity=0.172 Sum_probs=95.0
Q ss_pred ccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEE-EEEe-cCCC----CeE-EEEEeCCCCEEEEEECCCeEEEE
Q psy8748 1821 QAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCV-QTFF-GHEA----DVN-SVCFHPSGLAFATGSEDKTARLF 1893 (2004)
Q Consensus 1821 ~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I-~tl~-~h~s----~It-sIafSPdg~~LaSgS~DGtIrIW 1893 (2004)
......+..+-..|||+.+++-+. ..+.++++.+.... +++. ...+ .|+ .+..-..|.-+.+++.||-|.-|
T Consensus 217 ~~~~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQW 295 (733)
T COG4590 217 SVPFSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQW 295 (733)
T ss_pred CCCccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeee
Confidence 344556778889999999888765 68888888654321 1111 1111 121 11222345668888899998877
Q ss_pred -EccCCce-----eEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeEEEccCCCCeEEEEEcCCCCEE
Q psy8748 1894 -DIRADQQ-----IATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMAL 1967 (2004)
Q Consensus 1894 -DLrtgk~-----i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~tL~gHs~~VtsLaFSPDg~~L 1967 (2004)
|.+.+.. +..+.. ....+..+.-..+.+-+++-+.+|++..+.....+.+- +..--..+.-+++||.+.++
T Consensus 296 Fdvr~~~~p~l~h~R~f~l--~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL-~~~~~~~~~~~~~Sp~~~~L 372 (733)
T COG4590 296 FDVRRDGQPHLNHIRNFKL--APAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLL-FERAYQAPQLVAMSPNQAYL 372 (733)
T ss_pred eeeecCCCCcceeeecccc--CcccceeeccccccceEEEEcCCCceeeeecccCccee-hhhhhcCcceeeeCcccchh
Confidence 5543322 111111 11233333333345567777888888888754433332 22223366778999999998
Q ss_pred EEEECCCeEEEEECCCC
Q psy8748 1968 VTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1968 aSgS~DGtIrIWdlstg 1984 (2004)
++-. .|.|+++.+++.
T Consensus 373 l~e~-~gki~~~~l~Nr 388 (733)
T COG4590 373 LSED-QGKIRLAQLENR 388 (733)
T ss_pred eeec-CCceEEEEecCC
Confidence 8765 577999998875
No 483
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=69.14 E-value=29 Score=40.95 Aligned_cols=73 Identities=22% Similarity=0.317 Sum_probs=56.2
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCeeeEEE-------c-------cCCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Q psy8748 1917 AVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVL-------S-------GHENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1917 afSPdG~~LaSGSsDGsIrIWDL~tge~l~tL-------~-------gHs~~VtsLaFSPDg~~LaSgS~DGtIrIWdls 1982 (2004)
.+..+++++++-+.+|.+++||+.+++.+..- . .....|..+.++.+|.-+++-+ +|..+.|+.+
T Consensus 17 ~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~ 95 (219)
T PF07569_consen 17 FLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPD 95 (219)
T ss_pred EEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccc
Confidence 35567899999999999999999988765432 1 3556799999999998888776 5788999987
Q ss_pred CCeEEEEEE
Q psy8748 1983 NTIVWKVLK 1991 (2004)
Q Consensus 1983 tg~l~k~Ik 1991 (2004)
=+ .|..+.
T Consensus 96 L~-~W~~vs 103 (219)
T PF07569_consen 96 LG-CWIRVS 103 (219)
T ss_pred cc-eeEEec
Confidence 65 455543
No 484
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=68.71 E-value=1.9e+02 Score=34.32 Aligned_cols=106 Identities=18% Similarity=0.292 Sum_probs=64.6
Q ss_pred CCCcEEEeecCCeEEEEECCCCceeEEeeccccCCeEEEEECCCCCEEEEEECCC------eEEEE-ECC----CCeEEE
Q psy8748 1792 DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDK------SCKLW-DFR----EKKCVQ 1860 (2004)
Q Consensus 1792 dd~~LlSgS~DGtI~IWDl~tg~~i~~il~~h~~~ItsLafSPdg~~LaSGS~DG------sIrIW-Dlr----s~k~I~ 1860 (2004)
..+.++.+...+.|.+|++.............-+.|..+.++..|+++++--.+. .+|+| +.+ ...++.
T Consensus 27 g~d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~ 106 (215)
T PF14761_consen 27 GPDALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVR 106 (215)
T ss_pred CCceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEE
Confidence 3356666688889999999843332222224458899999999999999864332 45665 221 111111
Q ss_pred -EEec---------------------CCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCC
Q psy8748 1861 -TFFG---------------------HEADVNSVCFHPSGLAFATGSEDKTARLFDIRAD 1898 (2004)
Q Consensus 1861 -tl~~---------------------h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtg 1898 (2004)
.+-| ...++.+++..|-..-+++|+ ++++.+|.+...
T Consensus 107 vRiaG~~v~~~~~~~~~~qleiiElPl~~~p~ciaCC~~tG~LlVg~-~~~l~lf~l~~~ 165 (215)
T PF14761_consen 107 VRIAGHRVTPSFNESSKDQLEIIELPLSEPPLCIACCPVTGNLLVGC-GNKLVLFTLKYQ 165 (215)
T ss_pred EEEcccccccCCCCccccceEEEEecCCCCCCEEEecCCCCCEEEEc-CCEEEEEEEEEE
Confidence 1111 234567888888433455555 678999987643
No 485
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=68.45 E-value=3e+02 Score=34.00 Aligned_cols=165 Identities=15% Similarity=0.240 Sum_probs=92.9
Q ss_pred eEEEEECCCCceeEEeecc-----ccCCeEEEEECCCC-----CEEEEEEC-CCeEEEEECCCCeEEEEEecC-------
Q psy8748 1804 KIVTWNLETGQRIHEVAQA-----HIGDVVSISLSPDG-----QYFVTGSV-DKSCKLWDFREKKCVQTFFGH------- 1865 (2004)
Q Consensus 1804 tI~IWDl~tg~~i~~il~~-----h~~~ItsLafSPdg-----~~LaSGS~-DGsIrIWDlrs~k~I~tl~~h------- 1865 (2004)
+|..||+.+++.++++... ....+..+.+.... .+++.+.. .+.|.++|+.+++.-+....+
T Consensus 35 KLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~ 114 (287)
T PF03022_consen 35 KLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDA 114 (287)
T ss_dssp EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-SS
T ss_pred EEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceeccc
Confidence 5778899988877665221 34567788887622 34444443 357999999988765544321
Q ss_pred ------------CCCeEEEEEeC---CCCEEEEEECCCeEEEEEccC-----Cc---------eeEEEcCCCCCCCeEEE
Q psy8748 1866 ------------EADVNSVCFHP---SGLAFATGSEDKTARLFDIRA-----DQ---------QIATYLPPNKNSGFTSC 1916 (2004)
Q Consensus 1866 ------------~s~ItsIafSP---dg~~LaSgS~DGtIrIWDLrt-----gk---------~i~t~~~~~~~s~ItsL 1916 (2004)
...+.+++.+| ++++++.+.-.| -++|.+.+ .. .+..+. ........+
T Consensus 115 ~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss-~~ly~v~T~~L~~~~~~~~~~~~~~v~~lG--~k~~~s~g~ 191 (287)
T PF03022_consen 115 GPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSS-RKLYRVPTSVLRDPSLSDAQALASQVQDLG--DKGSQSDGM 191 (287)
T ss_dssp EEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT--SEEEEEEHHHHCSTT--HHH-HHHT-EEEE--E---SECEE
T ss_pred cceeccCceEecCCCccccccCCCCCCccEEEEEeCCC-CcEEEEEHHHhhCccccccccccccceecc--ccCCCCceE
Confidence 12355666655 556666665433 22333221 10 111111 111345678
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCe---eeEEE-ccC--CCCeEEEEEcC--CCCEEEEEE
Q psy8748 1917 AVSSSGRYIFCGSDDNNVHVWDLLKTT---HNGVL-SGH--ENRVTSISLSP--NGMALVTSS 1971 (2004)
Q Consensus 1917 afSPdG~~LaSGSsDGsIrIWDL~tge---~l~tL-~gH--s~~VtsLaFSP--Dg~~LaSgS 1971 (2004)
+++++|.++++--..+.|..|+..+.- ....+ ... -..+.++.+.+ +|.+.+.+.
T Consensus 192 ~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~sn 254 (287)
T PF03022_consen 192 AIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLSN 254 (287)
T ss_dssp EEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE-
T ss_pred EECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEEC
Confidence 899999999888889999999987511 12222 222 24678999988 777666553
No 486
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=67.66 E-value=3.1e+02 Score=33.87 Aligned_cols=132 Identities=17% Similarity=0.282 Sum_probs=70.2
Q ss_pred EEEeecCCeEEEEECCCCceeEEee------------------ccccCCeEEEEECC---CCCEEEEEECCCeEEEEECC
Q psy8748 1796 LLTGSGDMKIVTWNLETGQRIHEVA------------------QAHIGDVVSISLSP---DGQYFVTGSVDKSCKLWDFR 1854 (2004)
Q Consensus 1796 LlSgS~DGtI~IWDl~tg~~i~~il------------------~~h~~~ItsLafSP---dg~~LaSGS~DGsIrIWDlr 1854 (2004)
.++-...+.|.++|+.+++...... ......+..++.+| ++++|+.+...|. ++|.+.
T Consensus 81 YItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~-~ly~v~ 159 (287)
T PF03022_consen 81 YITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDAGPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSSR-KLYRVP 159 (287)
T ss_dssp EEEETTTCEEEEEETTTTEEEEEETCGCTTS-SSEEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-S-EEEEEE
T ss_pred EEeCCCcCcEEEEEccCCcEEEEecCCcceeccccceeccCceEecCCCccccccCCCCCCccEEEEEeCCCC-cEEEEE
Confidence 3344445689999999876542210 01122366666655 6667776654432 233221
Q ss_pred -----CC---------eEEEEEecCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCc---eeEEE-cCCCCCCCeEEE
Q psy8748 1855 -----EK---------KCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQ---QIATY-LPPNKNSGFTSC 1916 (2004)
Q Consensus 1855 -----s~---------k~I~tl~~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk---~i~t~-~~~~~~s~ItsL 1916 (2004)
+. ..+..+-........++++++|..+++--..+.|..|+..+.- ....+ ..+..-.....+
T Consensus 160 T~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~~~D~~G~ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~ 239 (287)
T PF03022_consen 160 TSVLRDPSLSDAQALASQVQDLGDKGSQSDGMAIDPNGNLYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGL 239 (287)
T ss_dssp HHHHCSTT--HHH-HHHT-EEEEE---SECEEEEETTTEEEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEE
T ss_pred HHHhhCccccccccccccceeccccCCCCceEEECCCCcEEEecCCCCeEEEEeCCCCcCccchheeEEcCceeecccee
Confidence 11 1122221112456778899999999998899999999987511 12222 212223567788
Q ss_pred EEcC--CCCEEEEE
Q psy8748 1917 AVSS--SGRYIFCG 1928 (2004)
Q Consensus 1917 afSP--dG~~LaSG 1928 (2004)
.+.+ +|.+.+..
T Consensus 240 ~i~~~~~g~L~v~s 253 (287)
T PF03022_consen 240 KIDPEGDGYLWVLS 253 (287)
T ss_dssp EE-T--TS-EEEEE
T ss_pred eeccccCceEEEEE
Confidence 8887 66655544
No 487
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=67.36 E-value=1.5e+02 Score=38.16 Aligned_cols=33 Identities=18% Similarity=0.382 Sum_probs=25.8
Q ss_pred CCCeEEEEEcCCCCEEEEEECCCeEEEEECCCC
Q psy8748 1952 ENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984 (2004)
Q Consensus 1952 s~~VtsLaFSPDg~~LaSgS~DGtIrIWdlstg 1984 (2004)
...|.+++..+..+.+++...+|.|.+|++..+
T Consensus 189 ~~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~~ 221 (422)
T PF08801_consen 189 RPKIVQVAVDPSRRLLYTLTSDGSIQVWDLGPG 221 (422)
T ss_dssp ---EEEEEEETTTTEEEEEESSE-EEEEEE-SS
T ss_pred hhceeeEEecCCcCEEEEEeCCCcEEEEEEeCC
Confidence 345999999998899999999999999999853
No 488
>KOG2377|consensus
Probab=67.02 E-value=55 Score=41.90 Aligned_cols=119 Identities=14% Similarity=0.185 Sum_probs=78.1
Q ss_pred cCCCCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEE--EcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy8748 1864 GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIAT--YLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLK 1941 (2004)
Q Consensus 1864 ~h~s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t--~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~t 1941 (2004)
...++|.+|.|++|.+.+++--.+..|.+++....+.... .........|....|+.+ .-+|..+..| +.+|-+..
T Consensus 64 ~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~p 141 (657)
T KOG2377|consen 64 DDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLP 141 (657)
T ss_pred cCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEch
Confidence 4567999999999999999999999999999854333221 122233345888889876 4555555555 66776543
Q ss_pred C-eeeEEEccCCCCeEEEEEcCCCCEEEEEE--CCCeEEEEECCCC
Q psy8748 1942 T-THNGVLSGHENRVTSISLSPNGMALVTSS--WDQFVKVWQESNT 1984 (2004)
Q Consensus 1942 g-e~l~tL~gHs~~VtsLaFSPDg~~LaSgS--~DGtIrIWdlstg 1984 (2004)
. ..++..+.|.-.|.-..|+++-+.+.-++ ..+++.=+.+..+
T Consensus 142 ekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~ 187 (657)
T KOG2377|consen 142 EKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAG 187 (657)
T ss_pred hhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEeec
Confidence 2 33455567888899999998877644433 2334444444444
No 489
>KOG4460|consensus
Probab=66.99 E-value=65 Score=41.98 Aligned_cols=27 Identities=19% Similarity=0.078 Sum_probs=21.1
Q ss_pred CeEEEEEeCCCCEEEEEECCCeEEEEE
Q psy8748 1868 DVNSVCFHPSGLAFATGSEDKTARLFD 1894 (2004)
Q Consensus 1868 ~ItsIafSPdg~~LaSgS~DGtIrIWD 1894 (2004)
.|..+..++.|..++-.|.+|.+.++=
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeL 131 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMEL 131 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEc
Confidence 366778889999999999898665543
No 490
>KOG2063|consensus
Probab=66.95 E-value=2e+02 Score=40.52 Aligned_cols=67 Identities=13% Similarity=0.210 Sum_probs=41.7
Q ss_pred EeCCCCEEEEEeCCCeEEEEECCCCceEE---E------e--eCCCCceEEEEEecCCCEEEEeecCCeEEEEEcCCCC
Q psy8748 1700 YSGDSRHCVSGSLDGKLIIWDTWTGNKTQ---V------I--PLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRD 1767 (2004)
Q Consensus 1700 FSPDG~~LASGS~DGtIrVWDl~Tgk~l~---t------i--~~Ht~~ItsLafSPdg~~LaSGS~DGtIrVWDl~t~~ 1767 (2004)
+..-|+.+..|+.||.+..|.+....... . + ..+..+|..+...+.-..+.+-+ |+.|.++++.+.+
T Consensus 22 va~~~~~l~vGt~~G~L~lY~i~~~~~~~~~~~~~~~~~~~~~~~kk~i~~l~~~~~~~~ll~l~-dsqi~~~~l~~~~ 99 (877)
T KOG2063|consen 22 VAAYGNHLYVGTRDGDLYLYSIYERGNPESVELVTETVKFEKEFSKKPINKLLVCASLELLLILS-DSQIAVHKLPELE 99 (877)
T ss_pred HHHhCCEEEEEcCCCcEEEEeccccccccchhhhcchhHHhhhhccchhHHHhhcchhcchheec-CCcceeeecCccc
Confidence 33568899999999999999876542111 1 0 11245566666655555554444 5668888876543
No 491
>KOG2063|consensus
Probab=66.56 E-value=79 Score=44.29 Aligned_cols=75 Identities=17% Similarity=0.166 Sum_probs=42.7
Q ss_pred EEecCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEE---E--ecCccceeeeEEeCCCcEEEeecCCeEEEEECCCCce
Q psy8748 1741 AFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRE---L--LGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQR 1815 (2004)
Q Consensus 1741 afSPdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~s---l--~gh~~~Vssvafsdd~~LlSgS~DGtI~IWDl~tg~~ 1815 (2004)
++..-|+.+..|+.+|.+.+|.+.............. + .-+..++..+...+...++-.-.|+.|.++++.+-+.
T Consensus 21 ~va~~~~~l~vGt~~G~L~lY~i~~~~~~~~~~~~~~~~~~~~~~~kk~i~~l~~~~~~~~ll~l~dsqi~~~~l~~~~~ 100 (877)
T KOG2063|consen 21 CVAAYGNHLYVGTRDGDLYLYSIYERGNPESVELVTETVKFEKEFSKKPINKLLVCASLELLLILSDSQIAVHKLPELEP 100 (877)
T ss_pred HHHHhCCEEEEEcCCCcEEEEeccccccccchhhhcchhHHhhhhccchhHHHhhcchhcchheecCCcceeeecCcccc
Confidence 3444589999999999999999976532211111000 0 0012344444333444455555677788887766554
No 492
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=66.08 E-value=27 Score=41.27 Aligned_cols=68 Identities=12% Similarity=0.183 Sum_probs=50.5
Q ss_pred EeCCCCEEEEEECCCeEEEEEccCCceeEEE------cCC------CCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC
Q psy8748 1874 FHPSGLAFATGSEDKTARLFDIRADQQIATY------LPP------NKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLK 1941 (2004)
Q Consensus 1874 fSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~------~~~------~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~t 1941 (2004)
+..++.++++.+.+|.+++||+.+++.+..- ... .....|..+.++.+|.-+++- .+|..+.||..-
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~l-sng~~y~y~~~L 96 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTL-SNGDSYSYSPDL 96 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEE-eCCCEEEecccc
Confidence 4457889999999999999999988765432 111 344678899999888877665 468889998654
Q ss_pred C
Q psy8748 1942 T 1942 (2004)
Q Consensus 1942 g 1942 (2004)
+
T Consensus 97 ~ 97 (219)
T PF07569_consen 97 G 97 (219)
T ss_pred c
Confidence 4
No 493
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=65.37 E-value=3.5e+02 Score=33.78 Aligned_cols=144 Identities=17% Similarity=0.332 Sum_probs=82.8
Q ss_pred cceeeeEEe-CCCcEEEeecCCe------EEEEECCCC----ceeE--E--eecccc--------CCeEEEEECCCCCEE
Q psy8748 1783 GFLSSCRFI-DDTTLLTGSGDMK------IVTWNLETG----QRIH--E--VAQAHI--------GDVVSISLSPDGQYF 1839 (2004)
Q Consensus 1783 ~~Vssvafs-dd~~LlSgS~DGt------I~IWDl~tg----~~i~--~--il~~h~--------~~ItsLafSPdg~~L 1839 (2004)
+..+.+.+. +++.+++.+++|. ++.+++... ..+. . .+.... ...-+|++.++|.++
T Consensus 20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~~~ 99 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGSFW 99 (326)
T ss_pred CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCCEE
Confidence 344566666 5566777777777 665555431 0000 0 011111 145578887777777
Q ss_pred EEEECC------CeEEEEECCCCeEEEEEe---------------cCCCCeEEEEEeCCCCEEEEEECCC-------e--
Q psy8748 1840 VTGSVD------KSCKLWDFREKKCVQTFF---------------GHEADVNSVCFHPSGLAFATGSEDK-------T-- 1889 (2004)
Q Consensus 1840 aSGS~D------GsIrIWDlrs~k~I~tl~---------------~h~s~ItsIafSPdg~~LaSgS~DG-------t-- 1889 (2004)
++.-.+ ..|+.++.. ++....+. ..+...-+++++|+|+.|+++.... .
T Consensus 100 is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l~~d~~~~~~ 178 (326)
T PF13449_consen 100 ISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPLKQDGPRANP 178 (326)
T ss_pred EEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccccCCCccccc
Confidence 766566 678888866 55444331 1234578999999999777665422 1
Q ss_pred -----EEE--EEccC-CceeE--EEcCCC-----CCCCeEEEEEcCCCCEEEE
Q psy8748 1890 -----ARL--FDIRA-DQQIA--TYLPPN-----KNSGFTSCAVSSSGRYIFC 1927 (2004)
Q Consensus 1890 -----IrI--WDLrt-gk~i~--t~~~~~-----~~s~ItsLafSPdG~~LaS 1927 (2004)
+++ ||..+ +.... .+.... ....++.+.+-+++++++.
T Consensus 179 ~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvL 231 (326)
T PF13449_consen 179 DNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVL 231 (326)
T ss_pred ccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEE
Confidence 444 45444 22222 222222 3567889999999997765
No 494
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=65.09 E-value=5.6e+02 Score=36.02 Aligned_cols=116 Identities=10% Similarity=0.118 Sum_probs=75.7
Q ss_pred cCCeEEEEECC-CCCEEEEEECCCeEEEEECCCCe-----EEEEEecCC----------CCeEEEEEeCCCCEEEEEECC
Q psy8748 1824 IGDVVSISLSP-DGQYFVTGSVDKSCKLWDFREKK-----CVQTFFGHE----------ADVNSVCFHPSGLAFATGSED 1887 (2004)
Q Consensus 1824 ~~~ItsLafSP-dg~~LaSGS~DGsIrIWDlrs~k-----~I~tl~~h~----------s~ItsIafSPdg~~LaSgS~D 1887 (2004)
..+...++|+| +.+.||+....|...|||+..+. .......+. +.-..+.|.++.+.+++++ .
T Consensus 145 g~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~-r 223 (765)
T PF10214_consen 145 GFPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCN-R 223 (765)
T ss_pred CCccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEc-C
Confidence 34567899998 55689999999999999992111 111111111 2234788988888888886 4
Q ss_pred CeEEEEEccCCceeEEEcCCCCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEECCC
Q psy8748 1888 KTARLFDIRADQQIATYLPPNKNSGFTSCAVSSS-GRYIFCGSDDNNVHVWDLLK 1941 (2004)
Q Consensus 1888 GtIrIWDLrtgk~i~t~~~~~~~s~ItsLafSPd-G~~LaSGSsDGsIrIWDL~t 1941 (2004)
..+.++|+++......+........|..+.-++. -.+++.- ....|...++..
T Consensus 224 ~~l~~~d~~~~~~~~~l~~~~~~~~IlDv~~~~~~~~~~FiL-Ts~eiiw~~~~~ 277 (765)
T PF10214_consen 224 SKLMLIDFESNWQTEYLVTAKTWSWILDVKRSPDNPSHVFIL-TSKEIIWLDVKS 277 (765)
T ss_pred CceEEEECCCCCccchhccCCChhheeeEEecCCccceEEEE-ecCeEEEEEccC
Confidence 5799999987766442433445567888888886 2233333 235677777765
No 495
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=63.49 E-value=3.6e+02 Score=35.72 Aligned_cols=189 Identities=19% Similarity=0.147 Sum_probs=0.0
Q ss_pred EEEeecCCeE--EEEECCCCceeEEeeccccCCeEEEEECC----CCCEEEEE---ECCCeEEEEECCCCeEEEEEecCC
Q psy8748 1796 LLTGSGDMKI--VTWNLETGQRIHEVAQAHIGDVVSISLSP----DGQYFVTG---SVDKSCKLWDFREKKCVQTFFGHE 1866 (2004)
Q Consensus 1796 LlSgS~DGtI--~IWDl~tg~~i~~il~~h~~~ItsLafSP----dg~~LaSG---S~DGsIrIWDlrs~k~I~tl~~h~ 1866 (2004)
+.....+|.. ..+.+.++.............+..+...+ ++-+++.+ ...+...++| ..|.....+....
T Consensus 69 v~~~~~~G~~~~~~~~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~iD-~~G~Vrw~~~~~~ 147 (477)
T PF05935_consen 69 VTYTDEDGKTETKTYTITTPPLPGDIPDTPINEVTVLKTSDEEMEDGLYFVNGNDWDSSSYTYLID-NNGDVRWYLPLDS 147 (477)
T ss_dssp EEEEE-TTEEEEEEEEEE----------TT-SEEEEEE-E-TT-TT-EEEEEETT--BEEEEEEEE-TTS-EEEEE-GGG
T ss_pred EEEEccCCeEeeeEEEEECCCcCccccccccceeeEeeccccccCCcEEEEeCCCCCCCceEEEEC-CCccEEEEEccCc
Q ss_pred CCeEEEEEeCCCCEEEEEECCCeEEEEEccCCceeEEEcCCCCC-CCeEEEEEcCCCCEEEEEe--------------CC
Q psy8748 1867 ADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKN-SGFTSCAVSSSGRYIFCGS--------------DD 1931 (2004)
Q Consensus 1867 s~ItsIafSPdg~~LaSgS~DGtIrIWDLrtgk~i~t~~~~~~~-s~ItsLafSPdG~~LaSGS--------------sD 1931 (2004)
.....+...++|.+++... +.+..+|+. |+.+..+..+... .--..+...|+|++|+.+. .|
T Consensus 148 ~~~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D 224 (477)
T PF05935_consen 148 GSDNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVED 224 (477)
T ss_dssp T--SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-
T ss_pred cccceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcccccccccEECCCCCEEEEEeecccccCCCCccEecC
Q ss_pred CeEEEEECCCCeeeEEE--ccCC-------------------------CCeEEEEEcC-CCCEEEEEECCCeEEEEECCC
Q psy8748 1932 NNVHVWDLLKTTHNGVL--SGHE-------------------------NRVTSISLSP-NGMALVTSSWDQFVKVWQESN 1983 (2004)
Q Consensus 1932 GsIrIWDL~tge~l~tL--~gHs-------------------------~~VtsLaFSP-Dg~~LaSgS~DGtIrIWdlst 1983 (2004)
. |..+| .+|+.+..+ ..|- -.++++.+.+ ++.+++|+-.-..|...|..+
T Consensus 225 ~-Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t 302 (477)
T PF05935_consen 225 V-IVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKIDYRT 302 (477)
T ss_dssp E-EEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE-TT
T ss_pred E-EEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCCCCeEEEEcCcceEEEEEECCC
Q ss_pred CeEEEEE
Q psy8748 1984 TIVWKVL 1990 (2004)
Q Consensus 1984 g~l~k~I 1990 (2004)
++..-.+
T Consensus 303 ~~i~Wil 309 (477)
T PF05935_consen 303 GKIKWIL 309 (477)
T ss_dssp S-EEEEE
T ss_pred CcEEEEe
No 496
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=63.33 E-value=4.3e+02 Score=34.07 Aligned_cols=194 Identities=18% Similarity=0.277 Sum_probs=106.3
Q ss_pred cCCCEEEEeecCCeEEEEEcCCCCCCCcceEEEEEecCccceee--eEEe---CCCc--EEEeec-C---CeEEEEECC-
Q psy8748 1744 QSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSS--CRFI---DDTT--LLTGSG-D---MKIVTWNLE- 1811 (2004)
Q Consensus 1744 Pdg~~LaSGS~DGtIrVWDl~t~~~~~~~k~i~sl~gh~~~Vss--vafs---dd~~--LlSgS~-D---GtI~IWDl~- 1811 (2004)
|...+++....++-+.+||++.. .+..+.. +.... +.+. .+.. +++++. + ..|++|.+.
T Consensus 66 p~kSlIigTdK~~GL~VYdL~Gk-------~lq~~~~--Gr~NNVDvrygf~l~g~~vDlavas~R~~g~n~l~~f~id~ 136 (381)
T PF02333_consen 66 PAKSLIIGTDKKGGLYVYDLDGK-------ELQSLPV--GRPNNVDVRYGFPLNGKTVDLAVASDRSDGRNSLRLFRIDP 136 (381)
T ss_dssp GGG-EEEEEETTTEEEEEETTS--------EEEEE-S--S-EEEEEEEEEEEETTEEEEEEEEEE-CCCT-EEEEEEEET
T ss_pred cccceEEEEeCCCCEEEEcCCCc-------EEEeecC--CCcceeeeecceecCCceEEEEEEecCcCCCCeEEEEEecC
Confidence 34567888888889999999653 2333321 12221 2111 2222 444443 2 468888765
Q ss_pred -CCceeEEeec------cccCCeEEEEEC--C-CCC-EEEEEECCCeEEEEECC---CC----eEEEEEecCCCCeEEEE
Q psy8748 1812 -TGQRIHEVAQ------AHIGDVVSISLS--P-DGQ-YFVTGSVDKSCKLWDFR---EK----KCVQTFFGHEADVNSVC 1873 (2004)
Q Consensus 1812 -tg~~i~~il~------~h~~~ItsLafS--P-dg~-~LaSGS~DGsIrIWDlr---s~----k~I~tl~~h~s~ItsIa 1873 (2004)
++. +..+.. .....+..+|+- + +|. +.++.+.+|.+..|.+. ++ +.++.+.. ...+..+.
T Consensus 137 ~~g~-L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~-~sQ~EGCV 214 (381)
T PF02333_consen 137 DTGE-LTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKV-GSQPEGCV 214 (381)
T ss_dssp TTTE-EEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE--SS-EEEEE
T ss_pred CCCc-ceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecC-CCcceEEE
Confidence 332 222211 112346677763 3 344 66778889988888764 33 35666644 45788899
Q ss_pred EeCCCCEEEEEECCCeEEEEEccCC-----ceeEEEcCCCCCCCeEEEEEcC--CC-CEEEEEe-CCCeEEEEECCC-Ce
Q psy8748 1874 FHPSGLAFATGSEDKTARLFDIRAD-----QQIATYLPPNKNSGFTSCAVSS--SG-RYIFCGS-DDNNVHVWDLLK-TT 1943 (2004)
Q Consensus 1874 fSPdg~~LaSgS~DGtIrIWDLrtg-----k~i~t~~~~~~~s~ItsLafSP--dG-~~LaSGS-sDGsIrIWDL~t-ge 1943 (2004)
......+|+.+-++.-|.-|+.+.. ..+...........+-.+++-. +| .||++.+ .+++..||+... ..
T Consensus 215 VDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~r~~~~~ 294 (381)
T PF02333_consen 215 VDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYDREGPNA 294 (381)
T ss_dssp EETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEESSTT--
T ss_pred EecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEecCCCCc
Confidence 9988889999999888888887522 2222222222334566666643 33 3555554 477899999864 34
Q ss_pred eeEEE
Q psy8748 1944 HNGVL 1948 (2004)
Q Consensus 1944 ~l~tL 1948 (2004)
.+..+
T Consensus 295 ~~g~f 299 (381)
T PF02333_consen 295 YVGSF 299 (381)
T ss_dssp EEEEE
T ss_pred ccceE
Confidence 44444
No 497
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=62.63 E-value=1.8e+02 Score=36.13 Aligned_cols=138 Identities=17% Similarity=0.177 Sum_probs=0.0
Q ss_pred EECCCeEEEEECCCCeEEEEEecCC------------CCeEEEEEeCCCCEEEEEEC------------------CCeEE
Q psy8748 1842 GSVDKSCKLWDFREKKCVQTFFGHE------------ADVNSVCFHPSGLAFATGSE------------------DKTAR 1891 (2004)
Q Consensus 1842 GS~DGsIrIWDlrs~k~I~tl~~h~------------s~ItsIafSPdg~~LaSgS~------------------DGtIr 1891 (2004)
|-..|.+.+.| ...+.+..+.... .....+.+.++|..+++... |+.+.
T Consensus 21 g~g~G~~~~lD-~~y~~i~~v~~~~~~~~~~~~~~~~~d~He~~it~~gt~lvt~~~~~~~dls~~gg~~~g~i~d~~~~ 99 (299)
T PF14269_consen 21 GYGYGSYVILD-SSYEVIWNVSAGNDFGTPDGEPGSYADHHEFEITPDGTALVTAYNPTPADLSPVGGPEDGWILDDVFQ 99 (299)
T ss_pred ccccceEEEEC-CCCcEEEEEECCCcccccccccCccCCccceEEcCCCcEEEEEccceeccccccCcCCCccEecceeE
Q ss_pred EEEccCCceeEEEcCCCC-------------------------CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCeeeE
Q psy8748 1892 LFDIRADQQIATYLPPNK-------------------------NSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNG 1946 (2004)
Q Consensus 1892 IWDLrtgk~i~t~~~~~~-------------------------~s~ItsLafSPdG~~LaSGSsDGsIrIWDL~tge~l~ 1946 (2004)
-.|+.+++.+..+....| .-.+.++....+|++|++.-.-..|.+.|-.+|+.+.
T Consensus 100 EiDi~TgevlfeW~a~DH~~~~~~~~~~~~~~~~g~~~~~~~D~~HiNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W 179 (299)
T PF14269_consen 100 EIDIETGEVLFEWSASDHVDPNDSYDSQDPLPGSGGSSSFPWDYFHINSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIW 179 (299)
T ss_pred EeccCCCCEEEEEEhhheecccccccccccccCCCcCCCCCCCccEeeeeeecCCccEEEEecccCEEEEEECCCCcEEE
Q ss_pred EEccCCCCeEE-----EEEcCCCCEEEEEECCCeEEEEE
Q psy8748 1947 VLSGHENRVTS-----ISLSPNGMALVTSSWDQFVKVWQ 1980 (2004)
Q Consensus 1947 tL~gHs~~Vts-----LaFSPDg~~LaSgS~DGtIrIWd 1980 (2004)
.+.+..+.=.. .+|-.|-+++-.+..++.|.+||
T Consensus 180 ~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFD 218 (299)
T PF14269_consen 180 RLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFD 218 (299)
T ss_pred EeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEc
No 498
>KOG4659|consensus
Probab=62.35 E-value=4.6e+02 Score=38.19 Aligned_cols=36 Identities=31% Similarity=0.333 Sum_probs=22.7
Q ss_pred ccccccccceeEEEEeC--CCC-EE----EEEeCCCeEEEEEC
Q psy8748 1686 KSLKGHINKVNSVHYSG--DSR-HC----VSGSLDGKLIIWDT 1721 (2004)
Q Consensus 1686 ~sL~GHt~~VtsLaFSP--DG~-~L----ASGS~DGtIrVWDl 1721 (2004)
.-..||...|.|..... ++. ++ ++.+.||.+.|=|.
T Consensus 341 ~mgdG~qR~veC~~C~G~a~~~~L~aPvala~a~DGSl~VGDf 383 (1899)
T KOG4659|consen 341 AMGDGHQRDVECPKCEGKADSISLFAPVALAYAPDGSLIVGDF 383 (1899)
T ss_pred eccCcccccccCCCCCCccccceeeceeeEEEcCCCcEEEccc
Confidence 34568888888877542 222 22 24567888888664
No 499
>PF10433 MMS1_N: Mono-functional DNA-alkylating methyl methanesulfonate N-term; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 2B5N_C 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A ....
Probab=61.86 E-value=5e+02 Score=34.35 Aligned_cols=281 Identities=14% Similarity=0.096 Sum_probs=125.0
Q ss_pred eeEEEEeCCCCEEEEEeCCCeEEEEECCC----C-ceEEEe--e-CCCCceEEEEEec-----CCCEEEEe--ecC--Ce
Q psy8748 1695 VNSVHYSGDSRHCVSGSLDGKLIIWDTWT----G-NKTQVI--P-LRSAWVMSVAFAQ-----SGNFVACG--GMD--NM 1757 (2004)
Q Consensus 1695 VtsLaFSPDG~~LASGS~DGtIrVWDl~T----g-k~l~ti--~-~Ht~~ItsLafSP-----dg~~LaSG--S~D--Gt 1757 (2004)
-.-++.+|.|++++.+..+|.+.|+-+.. + .....+ . .....|.+++|-. +...++.- ... ..
T Consensus 46 G~~l~vDP~~R~i~v~a~e~~~~v~~l~~~~~~~~~~~~~~~~pi~s~~~i~~~~FL~~~~~~~~p~la~L~~~~~~~~~ 125 (504)
T PF10433_consen 46 GQYLAVDPSGRCIAVSAYEGNFLVYPLNRSLDSDIAFSPHINSPIKSEGNILDMCFLHPSVGYDNPTLAILYVDSQRRTH 125 (504)
T ss_dssp --EEEE-TTSSEEEEEEBTTEEEEEE-SS----T-TT---EEEE--S-SEEEEEEEES---S-SS-EEEEEEEETT-EEE
T ss_pred CcEEEECCcCCEEEEEecCCeEEEEEecccccccccccccccccccCCceEEEEEEEecccCCCCceEEEEEEEecccce
Confidence 34688889999999999999999998877 1 111111 1 1366789999975 22333332 222 23
Q ss_pred EEEEE--cCCCCCC--CcceEEEEE-ecCccceeeeEEe-CCCcEEEeecCCeEEEEECC--CCc-eeEEeec---cccC
Q psy8748 1758 CTVYD--LNNRDST--GAAKVIREL-LGYEGFLSSCRFI-DDTTLLTGSGDMKIVTWNLE--TGQ-RIHEVAQ---AHIG 1825 (2004)
Q Consensus 1758 IrVWD--l~t~~~~--~~~k~i~sl-~gh~~~Vssvafs-dd~~LlSgS~DGtI~IWDl~--tg~-~i~~il~---~h~~ 1825 (2004)
+..++ ...+-.. ........+ .....+..-+... +.+.+++++.+ .+.+-+.. .+. ....+.. ....
T Consensus 126 ~~~y~w~~~~~l~~~~~~~~~~~~l~~~~~~p~~LIPlp~~~ggllV~~~~-~i~y~~~~~~~~~~~~~~~~~~~~~~~~ 204 (504)
T PF10433_consen 126 LVTYEWSLDDGLNHVISKSTLPIRLPNEDELPSFLIPLPNPPGGLLVGGEN-IIIYKNHLIGSGDYSFLSIPSPPSSSSS 204 (504)
T ss_dssp EEEEE--------EETTTTEEEE--EEEE-TTEEEEEE-TTT-SEEEEESS-EEEEEE------TTEEEEE--H-HHHTS
T ss_pred eEEEeeecccccceeeeeccccccccccCCCccEEEEcCCCCcEEEEECCE-EEEEecccccccccccccccCCccCCCc
Confidence 44444 3321100 011111001 0011111111222 23445555443 33333221 121 1111211 1122
Q ss_pred CeEEEEE-------CCCCCEEEEEECCCeEEEEECCCCe--EEEEEecC-CCCeEEEEEeCCC-CEEEEEECCCe--EEE
Q psy8748 1826 DVVSISL-------SPDGQYFVTGSVDKSCKLWDFREKK--CVQTFFGH-EADVNSVCFHPSG-LAFATGSEDKT--ARL 1892 (2004)
Q Consensus 1826 ~ItsLaf-------SPdg~~LaSGS~DGsIrIWDlrs~k--~I~tl~~h-~s~ItsIafSPdg-~~LaSgS~DGt--IrI 1892 (2004)
-+++..+ ..++..++.+..+|.+....+.... ......+. .....++++..+| .+++.|+.-|. +..
T Consensus 205 ~~~~~~~p~~~~~~~~~~~~~lL~~e~G~l~~l~l~~~~~~i~i~~~g~~~~~~s~l~~l~~g~d~lf~gs~~gds~l~~ 284 (504)
T PF10433_consen 205 LWTSWARPERNISYDKDGDRILLQDEDGDLYLLTLDNDGGSISITYLGTLCSIASSLTYLKNGGDYLFVGSEFGDSQLLQ 284 (504)
T ss_dssp -EEEEEE------SSTTSSEEEEEETTSEEEEEEEEEEEEEEEEEEEEE--S-ESEEEEESTT--EEEEEESSS-EEEEE
T ss_pred eEEEEEeccccceecCCCCEEEEEeCCCeEEEEEEEECCCeEEEEEcCCcCChhheEEEEcCCCEEEEEEEecCCcEEEE
Confidence 3344432 4467789999999999888776533 11222232 4556677777665 46777776554 555
Q ss_pred EEccCCceeEEEcCCCCCCCeEEEEEcCC----CC------EEEEEe---CCCeEEEEECCCCeeeE--E--EccCC--C
Q psy8748 1893 FDIRADQQIATYLPPNKNSGFTSCAVSSS----GR------YIFCGS---DDNNVHVWDLLKTTHNG--V--LSGHE--N 1953 (2004)
Q Consensus 1893 WDLrtgk~i~t~~~~~~~s~ItsLafSPd----G~------~LaSGS---sDGsIrIWDL~tge~l~--t--L~gHs--~ 1953 (2004)
|....-+.+..+ ..-++|..+++.+. .. .|++++ .+|.++++.- |-... . ...-. .
T Consensus 285 ~~~~~l~~~~~~---~N~~Pi~D~~v~~~~~~~~~~~~~~~~lv~~sG~g~~gsL~~lr~--Gi~~~~~~~~~~~l~~v~ 359 (504)
T PF10433_consen 285 ISLSNLEVLDSL---PNWGPIVDFCVVDSSNSGQPSNPSSDQLVACSGAGKRGSLRILRN--GIGIEGLELASSELPGVT 359 (504)
T ss_dssp EESESEEEEEEE-------SEEEEEEE-TSSSSS-------EEEEEESSGGG-EEEEEEE--SBEEE--EEEEEEESTEE
T ss_pred EeCCCcEEEEec---cCcCCccceEEeccccCCCCcccccceEEEEECcCCCCcEEEEec--cCCceeeeeeccCCCCce
Confidence 554434444444 33467888877531 11 455554 3678888752 32222 1 11112 2
Q ss_pred CeEEEEEcC-CCCEEEEEECCCeEEEEECC
Q psy8748 1954 RVTSISLSP-NGMALVTSSWDQFVKVWQES 1982 (2004)
Q Consensus 1954 ~VtsLaFSP-Dg~~LaSgS~DGtIrIWdls 1982 (2004)
.++.+.... ++.+|+.+..+ .-+++.+.
T Consensus 360 ~iW~l~~~~~~~~~lv~S~~~-~T~vl~~~ 388 (504)
T PF10433_consen 360 GIWTLKLSSSDHSYLVLSFPN-ETRVLQIS 388 (504)
T ss_dssp EEEEE-SSSSSBSEEEEEESS-EEEEEEES
T ss_pred EEEEeeecCCCceEEEEEcCC-ceEEEEEe
Confidence 233333222 25567766655 44577664
No 500
>KOG1898|consensus
Probab=61.86 E-value=2.7e+02 Score=39.55 Aligned_cols=132 Identities=15% Similarity=0.194 Sum_probs=76.3
Q ss_pred cCCeEEEEECCC-CceeEEee--ccccCCeEEEEECCCCCEEEEEECCCeEEEEECCCCeEEEEEec--CCCCeEEEEEe
Q psy8748 1801 GDMKIVTWNLET-GQRIHEVA--QAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFG--HEADVNSVCFH 1875 (2004)
Q Consensus 1801 ~DGtI~IWDl~t-g~~i~~il--~~h~~~ItsLafSPdg~~LaSGS~DGsIrIWDlrs~k~I~tl~~--h~s~ItsIafS 1875 (2004)
.+|.++.|++-. |+.+ .+. ..-.+.+. +..|-..++++|- ...+++||+...+.++.... ....|..+++.
T Consensus 910 ~~g~~ytyk~~~~g~~l-ellh~T~~~~~v~--Ai~~f~~~~Lagv-G~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt~ 985 (1205)
T KOG1898|consen 910 SSGFVYTYKFVRNGDKL-ELLHKTEIPGPVG--AICPFQGRVLAGV-GRFLRLYDLGKKKLLRKCELKFIPNRISSIQTY 985 (1205)
T ss_pred CCCceEEEEEEecCcee-eeeeccCCCccce--EEeccCCEEEEec-ccEEEEeeCChHHHHhhhhhccCceEEEEEeec
Confidence 345566666532 3322 221 12233343 4456555666554 56899999987776554432 24456677664
Q ss_pred CCCCEEEEEECCCeEEEEEccC-CceeEEEcCCCCCCCeEEEEEcCCCCEEEEEeCCCeEEEEEC
Q psy8748 1876 PSGLAFATGSEDKTARLFDIRA-DQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939 (2004)
Q Consensus 1876 Pdg~~LaSgS~DGtIrIWDLrt-gk~i~t~~~~~~~s~ItsLafSPdG~~LaSGSsDGsIrIWDL 1939 (2004)
+..+++|...-.|.++..+. ++....+........++++.+- |...++.|+.-|.+.+..+
T Consensus 986 --~~RI~VgD~qeSV~~~~y~~~~n~l~~fadD~~pR~Vt~~~~l-D~~tvagaDrfGNi~~vR~ 1047 (1205)
T KOG1898|consen 986 --GARIVVGDIQESVHFVRYRREDNQLIVFADDPVPRHVTALELL-DYDTVAGADRFGNIAVVRI 1047 (1205)
T ss_pred --ceEEEEeeccceEEEEEEecCCCeEEEEeCCCccceeeEEEEe-cCCceeeccccCcEEEEEC
Confidence 55788887666666554432 4445555444444556666554 4566888888888887765
Done!