RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8748
(2004 letters)
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 225 bits (573), Expect = 6e-66
Identities = 160/340 (47%), Positives = 234/340 (68%), Gaps = 3/340 (0%)
Query: 1640 QTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVH 1699
+ +L++E QL ++ ++ + AD L +T ++ ++++ +++L+GH+ K+ ++H
Sbjct: 3 ELDQLRQEAEQLKNQIRDARKACADATLSQITNNIDPVGRIQMRTRRTLRGHLAKIYAMH 62
Query: 1700 YSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCT 1759
+ DSR VS S DGKLIIWD++T NK IPLRS+WVM+ A+A SGN+VACGG+DN+C+
Sbjct: 63 WGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICS 122
Query: 1760 VYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEV 1819
+Y+L R+ +V REL G+ G+LS CRF+DD ++T SGD W++ET +
Sbjct: 123 IYNLKTREGNV--RVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET-GQQTTT 179
Query: 1820 AQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGL 1879
H GDV+S+SL+PD + FV+G+ D S KLWD RE C QTF GHE+D+N++CF P+G
Sbjct: 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN 239
Query: 1880 AFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939
AFATGS+D T RLFD+RADQ++ TY N G TS + S SGR + G DD N +VWD
Sbjct: 240 AFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA 299
Query: 1940 LKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVW 1979
LK GVL+GH+NRV+ + ++ +GMA+ T SWD F+K+W
Sbjct: 300 LKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 111 bits (278), Expect = 8e-27
Identities = 40/184 (21%), Positives = 72/184 (39%), Gaps = 8/184 (4%)
Query: 1713 DGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAA 1772
D +WD TG +T + VMS++ A G D ++D+
Sbjct: 163 DTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREG------ 216
Query: 1773 KVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMKI-VTWNLETGQRIHEVAQAHIGDVVSI 1830
+ G+E +++ F + TGS D + + + I + S+
Sbjct: 217 MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV 276
Query: 1831 SLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTA 1890
S S G+ + G D +C +WD + GH+ V+ + G+A ATGS D
Sbjct: 277 SFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL 336
Query: 1891 RLFD 1894
++++
Sbjct: 337 KIWN 340
Score = 79.4 bits (194), Expect = 5e-16
Identities = 37/242 (15%), Positives = 74/242 (30%), Gaps = 46/242 (19%)
Query: 1789 RFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSC 1848
+ D TL + ++ V +R + H+ + ++ D + V+ S D
Sbjct: 23 KACADATLSQITNNIDPVGRIQMRTRR---TLRGHLAKIYAMHWGTDSRLLVSASQDGKL 79
Query: 1849 KLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPN 1908
+WD V + V + + PSG A G D +++++ +
Sbjct: 80 IIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSREL 139
Query: 1909 K-------------------------------------------NSGFTSCAVSSSGRYI 1925
S +++ R
Sbjct: 140 AGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 199
Query: 1926 FCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTI 1985
G+ D + +WD+ + +GHE+ + +I PNG A T S D +++
Sbjct: 200 VSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259
Query: 1986 VW 1987
Sbjct: 260 EL 261
Score = 65.5 bits (158), Expect = 2e-11
Identities = 20/95 (21%), Positives = 37/95 (38%)
Query: 1668 EDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKT 1727
+D T + D + + S I + SV +S R ++G D +WD ++
Sbjct: 246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305
Query: 1728 QVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYD 1762
V+ V + G VA G D+ +++
Sbjct: 306 GVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 42.8 bits (99), Expect = 3e-04
Identities = 9/57 (15%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 1947 VLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003
L GH ++ ++ + LV++S D + +W + L +
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYT---TNKVHAIPLRSSWVMTC 103
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 170 bits (431), Expect = 3e-47
Identities = 70/317 (22%), Positives = 119/317 (37%), Gaps = 28/317 (8%)
Query: 1684 PKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFA 1743
K +L GH + V V + VS S D + +WD TG+ + + + V ++F
Sbjct: 9 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFD 68
Query: 1744 QSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDM 1803
SG +A D ++D + S + +++ S D
Sbjct: 69 HSGKLLASCSADMTIKLWDFQGFECIRTMHGH-----DHNVSSVSIMPNGDHIVSASRDK 123
Query: 1804 KIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFF 1863
I W ++TG + H V + + DG + S D++ ++W K+C
Sbjct: 124 TIKMWEVQTGYCVKTF-TGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 182
Query: 1864 GHEADVNSVCFH--------------------PSGLAFATGSEDKTARLFDIRADQQIAT 1903
H V + + G +GS DKT +++D+ + T
Sbjct: 183 EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMT 242
Query: 1904 YLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPN 1963
++ S G++I +DD + VWD L+ HE+ VTS+
Sbjct: 243 L--VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKT 300
Query: 1964 GMALVTSSWDQFVKVWQ 1980
+VT S DQ VKVW+
Sbjct: 301 APYVVTGSVDQTVKVWE 317
Score = 91.7 bits (226), Expect = 3e-20
Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 2/171 (1%)
Query: 1821 QAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLA 1880
H V + P V+ S D + K+WD+ +T GH V + F SG
Sbjct: 14 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKL 73
Query: 1881 FATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLL 1940
A+ S D T +L+D + + I T + N +S ++ +G +I S D + +W++
Sbjct: 74 LASCSADMTIKLWDFQGFECIRTMHGHDHN--VSSVSIMPNGDHIVSASRDKTIKMWEVQ 131
Query: 1941 KTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLK 1991
+GH V + + +G + + S DQ V+VW + L+
Sbjct: 132 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR 182
Score = 49.0 bits (115), Expect = 4e-06
Identities = 18/89 (20%), Positives = 32/89 (35%)
Query: 1914 TSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWD 1973
T + S+D + VWD L GH + V IS +G L + S D
Sbjct: 21 TRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD 80
Query: 1974 QFVKVWQESNTIVWKVLKVYNLEKKTIFC 2002
+K+W + + ++ ++
Sbjct: 81 MTIKLWDFQGFECIRTMHGHDHNVSSVSI 109
Score = 47.8 bits (112), Expect = 7e-06
Identities = 13/58 (22%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 1947 VLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCVN 2004
LSGH + VT + P +V++S D +KVW + + ++ ++
Sbjct: 12 ALSGHRSPVTRVIFHPVFSVMVSASEDATIKVW---DYETGDFERTLKGHTDSVQDIS 66
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 145 bits (365), Expect = 7e-38
Identities = 81/347 (23%), Positives = 135/347 (38%), Gaps = 48/347 (13%)
Query: 1675 PDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVI---- 1730
P P+ + H + V V +S D + +G + ++ G+ +
Sbjct: 45 PALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDS 103
Query: 1731 --------------PLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIR 1776
P ++ SV F+ G F+A G D + ++D+ NR V+
Sbjct: 104 AANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK-----IVMI 158
Query: 1777 ELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDG 1836
+ S F L++GSGD + W+L TGQ ++ V++S DG
Sbjct: 159 LQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVS-PGDG 217
Query: 1837 QYFVTGSVDKSCKLWDFREKKCVQT-------FFGHEADVNSVCFHPSGLAFATGSEDKT 1889
+Y GS+D++ ++WD V+ GH+ V SV F G + +GS D++
Sbjct: 218 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS 277
Query: 1890 ARLFDIRADQQIATYLPPNK----------NSGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939
+L++++ + PN S A + + YI GS D V WD
Sbjct: 278 VKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 337
Query: 1940 LKTTHNGVLSGHENRVTSI------SLSPNGMALVTSSWDQFVKVWQ 1980
+L GH N V S+ SL P T S D ++W+
Sbjct: 338 KSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWK 384
Score = 112 bits (279), Expect = 1e-26
Identities = 58/286 (20%), Positives = 104/286 (36%), Gaps = 31/286 (10%)
Query: 1678 PKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWV 1737
+ + S + SV +S D + +G+ D + IWD ++ +
Sbjct: 107 KDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDI 166
Query: 1738 MSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLL 1797
S+ + SG+ + G D ++DL + + + ++I
Sbjct: 167 YSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYI-----A 221
Query: 1798 TGSGDMKIVTWNLETGQRIH------EVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLW 1851
GS D + W+ ETG + E H V S+ + DGQ V+GS+D+S KLW
Sbjct: 222 AGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 281
Query: 1852 DFREKK------------CVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQ 1899
+ + C T+ GH+ V SV + +GS+D+ +D ++
Sbjct: 282 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 341
Query: 1900 QIATYLPPNKNSGFTSCAVSSS------GRYIFCGSDDNNVHVWDL 1939
+ + S AV++ GS D +W
Sbjct: 342 PLLML--QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 385
Score = 109 bits (272), Expect = 1e-25
Identities = 53/225 (23%), Positives = 87/225 (38%), Gaps = 19/225 (8%)
Query: 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVA 1750
H + S+ Y VSGS D + IWD TG + + + G ++A
Sbjct: 162 HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIA 221
Query: 1751 CGGMDNMCTVYDLNNRDSTGAAKVIRE-LLGYEGFLSSCRFI-DDTTLLTGSGDMKIVTW 1808
G +D V+D E G++ + S F D ++++GS D + W
Sbjct: 222 AGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 281
Query: 1809 NLETGQRIHE-----------VAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKK 1857
NL+ + H V+S++ + + +Y ++GS D+ WD +
Sbjct: 282 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN 341
Query: 1858 CVQTFFGHEADVNSVC------FHPSGLAFATGSEDKTARLFDIR 1896
+ GH V SV P FATGS D AR++ +
Sbjct: 342 PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 386
Score = 96.0 bits (237), Expect = 3e-21
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 1699 HYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLR-------SAWVMSVAFAQSGNFVAC 1751
GD ++ +GSLD + +WD+ TG + + V SV F + G V
Sbjct: 212 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVS 271
Query: 1752 GGMDNMCTVYDLNNRDSTG------AAKVIRELLGYEGFLSSCRFI-DDTTLLTGSGDMK 1804
G +D +++L N ++ + +G++ F+ S +D +L+GS D
Sbjct: 272 GSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG 331
Query: 1805 IVTWNLETGQRIHEVAQAHIGDVVSI------SLSPDGQYFVTGSVDKSCKLWDFRE 1855
++ W+ ++G + + Q H V+S+ SL P+ F TGS D ++W +++
Sbjct: 332 VLFWDKKSGNPLLML-QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7,
FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 134 bits (338), Expect = 1e-34
Identities = 71/339 (20%), Positives = 120/339 (35%), Gaps = 47/339 (13%)
Query: 1681 KLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSV 1740
+L K LKGH + V + VSGS D L +W TG + + + V S
Sbjct: 5 ELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 63
Query: 1741 AFAQSG-------------------------------NFVACGGMDNMCTVYDLNNRDST 1769
+ + + D R
Sbjct: 64 QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 123
Query: 1770 GAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVS 1829
+L C D +++G+ D + W+ ET +H + Q H
Sbjct: 124 IETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTL-QGH--TNRV 180
Query: 1830 ISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKT 1889
SL DG + V+GS+D S ++WD C+ T GH++ + + + L +G+ D T
Sbjct: 181 YSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILV--SGNADST 238
Query: 1890 ARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL-----LKTTH 1944
+++DI+ Q + T PNK+ +C + + ++ SDD V +WDL ++
Sbjct: 239 VKIWDIKTGQCLQTLQGPNKHQSAVTC-LQFNKNFVITSSDDGTVKLWDLKTGEFIRNLV 297
Query: 1945 NGVLSGHENRVTSISLSPNGMALVTSSWD----QFVKVW 1979
G V I S + S + + V
Sbjct: 298 TLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVL 336
Score = 95.7 bits (236), Expect = 2e-21
Identities = 47/217 (21%), Positives = 81/217 (37%), Gaps = 18/217 (8%)
Query: 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVA 1750
+ D R VSG+ D + +WD T + + V S+ F G V
Sbjct: 134 MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVV 191
Query: 1751 CGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNL 1810
G +D V+D+ I L G++ S D L++G+ D + W++
Sbjct: 192 SGSLDTSIRVWDVETG------NCIHTLTGHQSLTSGMEL-KDNILVSGNADSTVKIWDI 244
Query: 1811 ETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFF-----GH 1865
+TGQ + + + L + + +T S D + KLWD + + ++ G
Sbjct: 245 KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS 304
Query: 1866 EADVNSVCFHPSGLAFATGSEDKTA----RLFDIRAD 1898
V + + L A GS + T + D D
Sbjct: 305 GGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 341
Score = 93.3 bits (230), Expect = 1e-20
Identities = 49/250 (19%), Positives = 95/250 (38%), Gaps = 47/250 (18%)
Query: 1768 STGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDV 1827
G K + L G++ + +C +++GS D + W+ TG+ + + H G V
Sbjct: 2 RRGELKSPKVLKGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTL-VGHTGGV 60
Query: 1828 VSISLSPD--------------------------------------GQYFVTGSVDKSCK 1849
S + + + V+GS D + +
Sbjct: 61 WSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLR 120
Query: 1850 LWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNK 1909
+WD +C+ GH A V V + + G+ D +++D + + T +
Sbjct: 121 VWDIETGQCLHVLMGHVAAVRCVQYDGRRVVS--GAYDFMVKVWDPETETCLHTL----Q 174
Query: 1910 NSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVT 1969
++ G ++ GS D ++ VWD+ L+GH++ + + L N LV+
Sbjct: 175 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVS 232
Query: 1970 SSWDQFVKVW 1979
+ D VK+W
Sbjct: 233 GNADSTVKIW 242
Score = 85.6 bits (210), Expect = 5e-18
Identities = 48/235 (20%), Positives = 76/235 (32%), Gaps = 49/235 (20%)
Query: 1808 WNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEA 1867
W + V + H V++ L G V+GS D + K+W KC++T GH
Sbjct: 1 WRRGELKSPK-VLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG 58
Query: 1868 DVNSVCFHPS--------------------------------------GLAFATGSEDKT 1889
V S + +GS D T
Sbjct: 59 GVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDAT 118
Query: 1890 ARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLS 1949
R++DI Q + + R + G+ D V VWD T L
Sbjct: 119 LRVWDIETGQCLHVLMGHVAAVRCVQYDG----RRVVSGAYDFMVKVWDPETETCLHTLQ 174
Query: 1950 GHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCVN 2004
GH NRV S+ +G+ +V+ S D ++VW + + + +
Sbjct: 175 GHTNRVYSL--QFDGIHVVSGSLDTSIRVW---DVETGNCIHTLTGHQSLTSGME 224
Score = 38.3 bits (87), Expect = 0.008
Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Query: 1680 VKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDG----KLIIWD 1720
++ + G V + S C GS +G KL++ D
Sbjct: 293 IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 119 bits (297), Expect = 3e-29
Identities = 51/296 (17%), Positives = 97/296 (32%), Gaps = 15/296 (5%)
Query: 1690 GHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLR-----SAWVMSVAFAQ 1744
H V +V S +RH +G G + +WD + ++ S
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 1745 SGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMK 1804
G + GG + +++DL A++ S +
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFS----CCSDG 163
Query: 1805 IVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFG 1864
+ Q + Q H I +S DG TG +D + + WD RE +
Sbjct: 164 NIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ-LQQHD 222
Query: 1865 HEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRY 1924
+ + S+ + P+G + + ++ + Y S S + G++
Sbjct: 223 FTSQIFSLGYCPTG---EWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKW 279
Query: 1925 IFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQ 1980
DN ++ W + S + V S +S + +VT S D+ V++
Sbjct: 280 FVSTGKDNLLNAWRT-PYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Score = 87.9 bits (216), Expect = 9e-19
Identities = 36/259 (13%), Positives = 65/259 (25%), Gaps = 37/259 (14%)
Query: 1673 SMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPL 1732
+ + + N + S D + G L IWD L
Sbjct: 78 DISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL 137
Query: 1733 RSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI- 1791
S+ A A S + C + + + + T + G S
Sbjct: 138 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTK 197
Query: 1792 -----DDTTLLTGSGDMKIVTWNLETGQRIHEVA-------------------------- 1820
D T+ + + +I +
Sbjct: 198 LWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD 257
Query: 1821 ----QAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHP 1876
H V+S+ + G++FV+ D W + + V S
Sbjct: 258 KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISV 316
Query: 1877 SGLAFATGSEDKTARLFDI 1895
TGS DK A ++++
Sbjct: 317 DDKYIVTGSGDKKATVYEV 335
Score = 72.1 bits (175), Expect = 1e-13
Identities = 39/201 (19%), Positives = 67/201 (33%), Gaps = 8/201 (3%)
Query: 1792 DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLW 1851
+ D I ++I+ + H V ++++S ++ TG K+W
Sbjct: 21 GQMQPVPFPPDALIGPGIPRHARQINTLN--HGEVVCAVTISNPTRHVYTGG-KGCVKVW 77
Query: 1852 D-----FREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLP 1906
D + + + S P G G E T ++D+ A
Sbjct: 78 DISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAEL 137
Query: 1907 PNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMA 1966
+ + A+S + F D N+ VWDL T GH + + I +S +G
Sbjct: 138 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTK 197
Query: 1967 LVTSSWDQFVKVWQESNTIVW 1987
L T D V+ W
Sbjct: 198 LWTGGLDNTVRSWDLREGRQL 218
Score = 61.4 bits (147), Expect = 4e-10
Identities = 32/245 (13%), Positives = 61/245 (24%), Gaps = 44/245 (17%)
Query: 1779 LGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQ----AHIGDVVSISLSP 1834
L + + + + T + G + W++ V+Q + S L P
Sbjct: 48 LNHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 1835 DGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFD 1894
DG + G + +WD + S + S +
Sbjct: 108 DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAV 167
Query: 1895 IRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDN---------------------- 1932
Q G + +S+ G ++ G DN
Sbjct: 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQI 227
Query: 1933 ------------------NVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQ 1974
+ + L HE+ V S+ + G V++ D
Sbjct: 228 FSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDN 287
Query: 1975 FVKVW 1979
+ W
Sbjct: 288 LLNAW 292
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 116 bits (291), Expect = 5e-29
Identities = 54/301 (17%), Positives = 99/301 (32%), Gaps = 28/301 (9%)
Query: 1688 LKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGN 1747
V + Y D + VSG D + IWD T +++ + V+ + + +
Sbjct: 11 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVI 68
Query: 1748 FVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVT 1807
+ +T L D + I
Sbjct: 69 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRS---------IAV 119
Query: 1808 WNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEA 1867
W++ + I + D +Y V+ S D++ K+W+ + V+T GH+
Sbjct: 120 WDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR 179
Query: 1868 DVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFC 1927
+ + + + +GS D T RL+DI + + + + I
Sbjct: 180 GIACLQYRDRLV--VSGSSDNTIRLWDIECGACLRVL----EGHEELVRCIRFDNKRIVS 233
Query: 1928 GSDDNNVHVWDLLKTTHN---------GVLSGHENRVTSISLSPNGMALVTSSWDQFVKV 1978
G+ D + VWDL+ L H RV L + +V+SS D + +
Sbjct: 234 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVF--RLQFDEFQIVSSSHDDTILI 291
Query: 1979 W 1979
W
Sbjct: 292 W 292
Score = 74.5 bits (181), Expect = 1e-14
Identities = 37/162 (22%), Positives = 61/162 (37%), Gaps = 19/162 (11%)
Query: 1699 HYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMC 1758
D ++ VS S D + +W+T T + + + + + V G DN
Sbjct: 143 VVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTI 200
Query: 1759 TVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHE 1818
++D+ +R L G+E L C D+ +++G+ D KI W+L
Sbjct: 201 RLWDIECG------ACLRVLEGHE-ELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRA 253
Query: 1819 VA--------QAHIGDVVSISLSPDGQYFVTGSVDKSCKLWD 1852
A H G V L D V+ S D + +WD
Sbjct: 254 PAGTLCLRTLVEHSGRV--FRLQFDEFQIVSSSHDDTILIWD 293
Score = 71.8 bits (174), Expect = 8e-14
Identities = 34/205 (16%), Positives = 65/205 (31%), Gaps = 46/205 (22%)
Query: 1814 QRIHEVAQAHIGDVVSI-SLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSV 1872
QRIH + L D Q V+G D + K+WD +C + GH V +
Sbjct: 6 QRIH----CRSETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCL 61
Query: 1873 CFHPSGLAFATGS--------------------------------------EDKTARLFD 1894
+ + + +D++ ++D
Sbjct: 62 QYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWD 121
Query: 1895 IRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENR 1954
+ + I + + V +YI S D + VW+ L+GH+
Sbjct: 122 MASPTDITLRRVLVGHRAAVNV-VDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRG 180
Query: 1955 VTSISLSPNGMALVTSSWDQFVKVW 1979
+ + +V+ S D +++W
Sbjct: 181 IACL--QYRDRLVVSGSSDNTIRLW 203
Score = 46.8 bits (109), Expect = 1e-05
Identities = 12/71 (16%), Positives = 22/71 (30%)
Query: 1917 AVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFV 1976
+ + I G DN + +WD +L+GH V + + +S V
Sbjct: 20 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRV 79
Query: 1977 KVWQESNTIVW 1987
+
Sbjct: 80 WDVNTGEMLNT 90
Score = 45.2 bits (105), Expect = 4e-05
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 1666 KLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWD 1720
K+ D+ A++ + ++L H +V + + D VS S D ++IWD
Sbjct: 241 KVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 293
Score = 37.5 bits (85), Expect = 0.012
Identities = 8/56 (14%), Positives = 19/56 (33%), Gaps = 5/56 (8%)
Query: 1947 VLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFC 2002
S V L + +V+ D +K+W + + ++ ++ C
Sbjct: 10 CRSETSKGVYC--LQYDDQKIVSGLRDNTIKIW---DKNTLECKRILTGHTGSVLC 60
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 101 bits (252), Expect = 3e-23
Identities = 29/308 (9%), Positives = 72/308 (23%), Gaps = 24/308 (7%)
Query: 1690 GHINKVNSVHYSGDSRHCVSGSLDGK--LIIWDTWTGN---KTQVIPLRSAWVMSVAFAQ 1744
++ V GD++ L I+D TG + + A +
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKF 99
Query: 1745 SGNFVACGGMDNMCTVYDLNNRDSTGAAKVIREL-LGYEGFLSSCRFIDDTTLLTGSGDM 1803
+ + + +I + + + F G
Sbjct: 100 AVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 159
Query: 1804 KIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWD-------FREK 1856
I +++E + + + + D + S D F
Sbjct: 160 AIHVYDMEGRKIFAATTENS--HDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVV 217
Query: 1857 KCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTAR-----LFDIRADQQIATYLPPNKNS 1911
N P + G D ++ +
Sbjct: 218 SKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSIL 277
Query: 1912 GFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSS 1971
++ Y + + +D+ ++ +N +T + LS + ++
Sbjct: 278 IYSVPVHGEFAAYYQGAPEKGVLLKYDV----KTRKVTEVKNNLTDLRLSADRKTVMVRK 333
Query: 1972 WDQFVKVW 1979
D + +
Sbjct: 334 DDGKIYTF 341
Score = 86.8 bits (213), Expect = 2e-18
Identities = 22/181 (12%), Positives = 46/181 (25%), Gaps = 14/181 (7%)
Query: 1690 GHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGN-------KTQVIPLRSAWVMSVAF 1742
+ + + DS++ S D N K VIPL
Sbjct: 176 TENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 235
Query: 1743 AQSGNFVACGG-MDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD-TTLLTGS 1800
G N G ++I L S +
Sbjct: 236 VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAP 295
Query: 1801 GDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQ 1860
++ ++++T + ++ + LS D + + D + + + +
Sbjct: 296 EKGVLLKYDVKTRK-----VTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDER 350
Query: 1861 T 1861
T
Sbjct: 351 T 351
Score = 84.9 bits (208), Expect = 1e-17
Identities = 31/315 (9%), Positives = 77/315 (24%), Gaps = 36/315 (11%)
Query: 1670 VTASMPDAPKVKLMP-----KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTG 1724
+ + + + + ++ V ++ + + V + +++ D TG
Sbjct: 58 FIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG 117
Query: 1725 NKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRD----STGAAKVIRELLG 1780
T + R A + + + F+A G + K+
Sbjct: 118 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTE 177
Query: 1781 YEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQ------AHIGDVVSISLSP 1834
+ D L S + + EV G L P
Sbjct: 178 NSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVP 237
Query: 1835 DGQYFVTGSVDKSCKLW-------DFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSED 1887
G D + D + + + + + E
Sbjct: 238 RSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEK 297
Query: 1888 KTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGV 1947
+D+ +++ + T +S+ + + DD ++ + +
Sbjct: 298 GVLLKYDV-KTRKVTEV-----KNNLTDLRLSADRKTVMVRKDDGKIYTFP--------L 343
Query: 1948 LSGHENRVTSISLSP 1962
+ R P
Sbjct: 344 EKPEDERTVETDKRP 358
Score = 73.4 bits (178), Expect = 6e-14
Identities = 24/301 (7%), Positives = 56/301 (18%), Gaps = 22/301 (7%)
Query: 1697 SVHYS-GDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMD 1755
+ +S D S G+ I D +V + V G
Sbjct: 7 AEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTR 63
Query: 1756 NMCTVYDLNN-----RDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNL 1810
+ + + + + D ++T + T
Sbjct: 64 EGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE 123
Query: 1811 ETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVN 1870
+ + + P G V ++ ++D +K +
Sbjct: 124 RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFA-ATTENSHDY 182
Query: 1871 SVCFHPSGLAFATGSEDKTARLFDIRADQQIAT-----YLPPNKNSGFTSCAVSSSGRYI 1925
+ F S D ++ P +
Sbjct: 183 APAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTS 242
Query: 1926 FCGS-------DDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKV 1978
G ++ D L + + +
Sbjct: 243 EAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLK 302
Query: 1979 W 1979
+
Sbjct: 303 Y 303
Score = 49.1 bits (115), Expect = 4e-06
Identities = 19/162 (11%), Positives = 41/162 (25%), Gaps = 9/162 (5%)
Query: 1831 SLSP-DGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSG--LAFATGSED 1887
SP DG S + + D ++ + V E
Sbjct: 9 DFSPLDGDLIAFVSRGQ-AFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREG 65
Query: 1888 KTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGV 1947
++D R + + V +G++ +D + DL +
Sbjct: 66 DFLGIYDYRTGKAEKFEENLGNV---FAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVI 122
Query: 1948 LSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKV 1989
E +T ++S N + + + +
Sbjct: 123 ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVY 164
Score = 44.5 bits (103), Expect = 9e-05
Identities = 14/172 (8%), Positives = 42/172 (24%), Gaps = 5/172 (2%)
Query: 1563 FHACSTLLASLSSYQYTRKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATF 1622
F A S L LS + + ++ + + + + + T
Sbjct: 186 FDADSKNLYYLSYRS-LDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTK--LVPRSMTS 242
Query: 1623 RDLMMKPTSSINIYLKLQTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAPKVKL 1682
+ + ++ + + P+ +
Sbjct: 243 EAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLK 302
Query: 1683 --MPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPL 1732
+ + + N + + S D + + DGK+ + + +
Sbjct: 303 YDVKTRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVET 354
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 100 bits (249), Expect = 5e-23
Identities = 44/359 (12%), Positives = 109/359 (30%), Gaps = 72/359 (20%)
Query: 1683 MPKK-SLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVA 1741
+P++ +L+GH+ V + + + ++G+ D + ++D+ + V ++
Sbjct: 2 VPQRTTLRGHMTSVITC-LQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALK 60
Query: 1742 FAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSG 1801
+A G V+ + + L + + ++TGS
Sbjct: 61 YAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNS----TVRCLDIVEYKNIKYIVTGSR 116
Query: 1802 DMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPD--------------------GQYFVT 1841
D + W L + + + H +V + + G V+
Sbjct: 117 DNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVS 176
Query: 1842 GSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDI------ 1895
GS D + +WD + KC+ GH + S + + S D T R++D+
Sbjct: 177 GSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 236
Query: 1896 ------------------------------RADQQIATYLPPNKNSGFTSCAVSSSGRYI 1925
D + ++ ++ I
Sbjct: 237 YTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNI 296
Query: 1926 FCGSDDNNVHVWDL-----LKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVW 1979
+N ++++L + + +++ S++ + + D +
Sbjct: 297 LVSGSENQFNIYNLRSGKLVHAN----ILKDADQIWSVNFKGKTL-VAAVEKDGQSFLE 350
Score = 90.0 bits (221), Expect = 2e-19
Identities = 36/160 (22%), Positives = 63/160 (39%), Gaps = 2/160 (1%)
Query: 1821 QAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLA 1880
+ H+ V++ L + Y +TG+ DK +++D KK + GH+ V ++ + G+
Sbjct: 9 RGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGI- 66
Query: 1881 FATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLL 1940
+GS D+T R++DI+ + N + +YI GS DN +HVW L
Sbjct: 67 LVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLP 126
Query: 1941 KTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQ 1980
K + + V V
Sbjct: 127 KESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRT 166
Score = 66.5 bits (160), Expect = 9e-12
Identities = 40/237 (16%), Positives = 71/237 (29%), Gaps = 14/237 (5%)
Query: 1657 EEQAKQADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKL 1716
+++ D E + P+ L+GH+ V +V G VSGS D L
Sbjct: 126 PKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHG--NIVVSGSYDNTL 183
Query: 1717 IIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIR 1776
I+WD ++ + + S + MD ++DL N + +
Sbjct: 184 IVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHT 243
Query: 1777 ELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDG 1836
L+G + + + H +
Sbjct: 244 ALVGLLRLSDKFLVS---------AAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSD 294
Query: 1837 QYFVTGSVDKSCKLWDFREKKCVQTFF-GHEADVNSVCFHPSGLAFATGSEDKTARL 1892
V+GS + +++ R K V + SV F L A +D + L
Sbjct: 295 NILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTL-VAAVEKDGQSFL 349
Score = 60.3 bits (144), Expect = 9e-10
Identities = 13/72 (18%), Positives = 27/72 (37%)
Query: 1916 CAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQF 1975
+ Y+ G+DD + V+D + LSGH+ V ++ + G+ + S+
Sbjct: 17 TCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTV 76
Query: 1976 VKVWQESNTIVW 1987
+
Sbjct: 77 RVWDIKKGCCTH 88
Score = 59.1 bits (141), Expect = 2e-09
Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 12/170 (7%)
Query: 1686 KSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQS 1745
L GH +++ S Y + + C+S S+D + IWD G + +A V + +
Sbjct: 195 YILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDK 254
Query: 1746 GNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKI 1805
A + +R + + + F +L + +
Sbjct: 255 FLVSAAADGSIRGWDANDYSRKFSY---------HHTNLSAITTFYVSDNILVSGSENQF 305
Query: 1806 VTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLW--DF 1853
+NL +G+ +H + S++ D L DF
Sbjct: 306 NIYNLRSGKLVHANILKDADQIWSVNFKGKTL-VAAVEKDGQSFLEILDF 354
Score = 52.6 bits (124), Expect = 3e-07
Identities = 29/257 (11%), Positives = 76/257 (29%), Gaps = 23/257 (8%)
Query: 1699 HYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMC 1758
+ ++ V+GS D L +W + + + + + +M
Sbjct: 103 VEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA 162
Query: 1759 TVYDLNNRDSTGAA---------------KVIRELLGYE-GFLSSCRFIDDTTLLTGSGD 1802
+V ++ + + K + L G+ S+ + ++ S D
Sbjct: 163 SVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD 222
Query: 1803 MKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTF 1862
I W+LE G+ ++ + + F+ + +
Sbjct: 223 TTIRIWDLENGELMYTLQGHTALVGLL----RLSDKFLVSAAADGSIRGWDANDYSRKFS 278
Query: 1863 FGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSG 1922
+ H F+ S +GS + ++++R+ + + + + + S
Sbjct: 279 YHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQ-IWSVNF-KGK 335
Query: 1923 RYIFCGSDDNNVHVWDL 1939
+ D + L
Sbjct: 336 TLVAAVEKDGQSFLEIL 352
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 98.9 bits (244), Expect = 8e-23
Identities = 41/298 (13%), Positives = 86/298 (28%), Gaps = 10/298 (3%)
Query: 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIP-LRSAWVMSVAFA 1743
+ GH + ++ S D + S +G + WD TG +V P + + + +
Sbjct: 5 DQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTT 64
Query: 1744 QSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDM 1803
G+ D++ V +G D + +
Sbjct: 65 SKGDLFTVSWDDHLKVV----PAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYK 120
Query: 1804 KIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFF 1863
I ++ + ++ V++S V+T
Sbjct: 121 HIAIYSHGKLTEVP---ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIV 177
Query: 1864 GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGR 1923
+ + AT K + T + + S
Sbjct: 178 HPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNV 237
Query: 1924 YIFCGSDDNNVHVWDLLKTTHNGVLS--GHENRVTSISLSPNGMALVTSSWDQFVKVW 1979
+ GS DN+V VW++ K + + ++ H + + N +V++ D +K W
Sbjct: 238 RLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFW 295
Score = 71.9 bits (174), Expect = 1e-13
Identities = 27/174 (15%), Positives = 52/174 (29%), Gaps = 6/174 (3%)
Query: 1815 RIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFF-GHEADVNSVC 1873
I +V H + ++S S DG+ + + WD + F H + +
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 1874 FHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNN 1933
G F +D + + + + +S AVS+ G +
Sbjct: 63 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHI 122
Query: 1934 VHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVW 1987
T + ++LS + + D V V++ S V
Sbjct: 123 AIYSHGKLTEVP-----ISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVS 171
Score = 37.3 bits (84), Expect = 0.015
Identities = 8/53 (15%), Positives = 15/53 (28%)
Query: 1668 EDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWD 1720
D + + + K P H + + VS D + W+
Sbjct: 244 LDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWN 296
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 100 bits (248), Expect = 1e-22
Identities = 51/374 (13%), Positives = 103/374 (27%), Gaps = 67/374 (17%)
Query: 1679 KVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGN------KTQVIPL 1732
KV + + K H + SV VS S DG L +WD + K+ +
Sbjct: 1 KVFIATANAGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFV 58
Query: 1733 RSAWVMSVAFAQS-------GNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEG-- 1783
+ + V Q+ VA Y + D T + L
Sbjct: 59 HKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMK 118
Query: 1784 --------FLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHI----------- 1824
+ +S + L+ W +
Sbjct: 119 KHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVE 178
Query: 1825 ------GDVVSISLSPDGQYFVTGSVDKSCKL------WDFREKKCVQTFFGHEADVNSV 1872
S+ +S G TG + + ++ + + + + SV
Sbjct: 179 SPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV 237
Query: 1873 CFHPSGLAFATGSEDKTA---RLFDIRADQQIATYLPPNK-----------NSGFTSCAV 1918
F P G A + + L++ ++I + P +S S +
Sbjct: 238 KFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSF 297
Query: 1919 SSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRV----TSISLSPNGMALVTSSWDQ 1974
+ SG + D + WD+ L+ H + + +++ +G +L
Sbjct: 298 NDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFD 357
Query: 1975 FVKVWQESNTIVWK 1988
+ + + +
Sbjct: 358 VKFLKKGWRSGMGA 371
Score = 86.4 bits (212), Expect = 4e-18
Identities = 29/230 (12%), Positives = 61/230 (26%), Gaps = 47/230 (20%)
Query: 1819 VAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKC------VQTFFGHEADVNSV 1872
+AH D+ S+S + V+ S D K+WD + + F H++ ++ V
Sbjct: 9 AGKAHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHV 66
Query: 1873 CF-------HPSGLAFATGSEDKTARLFDIRADQQIATYLPPN--------KNSGFTSCA 1917
AT S + I + + + K F +
Sbjct: 67 DVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALK 126
Query: 1918 VSSSG-----RYIFCGSDDNNVHVWDLLKTTHN------------------GVLSGHENR 1954
+S + ++W
Sbjct: 127 WGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQF 186
Query: 1955 VTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCVN 2004
TS+ +S G+ + T + V++ + S + + +
Sbjct: 187 ATSVDISERGL-IATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIR 235
Score = 77.6 bits (189), Expect = 3e-15
Identities = 27/261 (10%), Positives = 65/261 (24%), Gaps = 48/261 (18%)
Query: 1791 IDDTTLLTGSGDMKIVTWNLETGQ-----------RIHEVAQAHIGDVVSISL-SPDGQY 1838
++ ++ SGD + W+ + +H+ H+ + +I + +
Sbjct: 22 ACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 81
Query: 1839 FVTGSVDKSCKLWDFREKKCVQTFFGHE----------ADVNSVCFHPSGLA-----FAT 1883
T S + + + + ++ + S
Sbjct: 82 VATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVA 141
Query: 1884 GSEDKTARLFDIRADQQIATYLP---------------PNKNSGFTSCAVSSSGRYIFCG 1928
T ++ + L P S F + S I G
Sbjct: 142 TDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATG 201
Query: 1929 SDDNNVHVWDLLKTTHNGVL------SGHENRVTSISLSPNGMALVTSSWDQFVKVWQES 1982
++ V + +L + N + S+ SP G L +
Sbjct: 202 FNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLY 261
Query: 1983 NTIVWKVLKVYNLEKKTIFCV 2003
T + + ++ +
Sbjct: 262 ETEFGERIGSLSVPTHSSQAS 282
Score = 76.8 bits (187), Expect = 7e-15
Identities = 42/279 (15%), Positives = 81/279 (29%), Gaps = 47/279 (16%)
Query: 1687 SLKGHINKVNSVHYSGDSRHC---VSGSLDGKLIIWDTWTG------------------N 1725
+K H S D V+ + G IW
Sbjct: 116 DMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQG 175
Query: 1726 KTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFL 1785
+ S + SV ++ G +A G + + +L+ + ++ +
Sbjct: 176 TVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSI 234
Query: 1786 SSCRFIDDTTL-LTGSGD---MKIVTWNLETGQRIHE------------VAQAHIGDVVS 1829
S +F +L I + E G+RI AH V+S
Sbjct: 235 RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMS 294
Query: 1830 ISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADV----NSVCFHPSGLAFATGS 1885
+S + G+ + D + WD + K+ + T H D+ + + G + A
Sbjct: 295 LSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPG 354
Query: 1886 EDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRY 1924
L + + + + N + S R+
Sbjct: 355 VFDVKFL-----KKGWRSGMGADLNESLCCVCLDRSIRW 388
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 97.2 bits (240), Expect = 6e-22
Identities = 30/323 (9%), Positives = 73/323 (22%), Gaps = 31/323 (9%)
Query: 1688 LKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLR---SAWVMSVAF-A 1743
+ + ++ + + S DG L ++ K + ++ F
Sbjct: 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID 66
Query: 1744 QSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDM 1803
+ + G + DL S A + D L+ S D
Sbjct: 67 NTDLQIYVGTVQGEILKVDLIGSPSFQALTNNE----ANLGICRICKYGDDKLIAASWDG 122
Query: 1804 KIVTWNLETGQRIHEVAQAHIGDVVSISLSPD-----GQYFVTGSVDKSCKLWDFREKKC 1858
I + + + + + G + + + +
Sbjct: 123 LIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCED 182
Query: 1859 VQTFFGHEAD----VNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLP-------- 1906
+ +A S D +
Sbjct: 183 DNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHR 242
Query: 1907 -----PNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLS 1961
N S S ++++ D + W+L + N + + ++
Sbjct: 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKF-NEDSVVKIA 301
Query: 1962 PNGMALVTSSWDQFVKVWQESNT 1984
+ L ++ D K +
Sbjct: 302 CSDNILCLATSDDTFKTNAAIDQ 324
Score = 82.2 bits (201), Expect = 7e-17
Identities = 27/299 (9%), Positives = 84/299 (28%), Gaps = 28/299 (9%)
Query: 1681 KLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSV 1740
K + + + + ++ ++ + I+ G+ + + + +
Sbjct: 45 KNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGI 104
Query: 1741 AFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEG---FLSSCRFIDDTTLL 1797
+ ++ R+ ++ L + + L+
Sbjct: 105 CRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLI 164
Query: 1798 TGSGDMKIVTWNLETGQRIHEVAQAH---IGDVVSISLSPDGQYFVTGSVDKSCKLWD-- 1852
G + ++ + L + + + L + + + S+D +
Sbjct: 165 VGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD 224
Query: 1853 -------------FREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQ 1899
FR + VNS+ F P T D ++++ +
Sbjct: 225 DQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRK 284
Query: 1900 QIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSI 1958
+I + N++S ++ S + + D+ + T + + + + I
Sbjct: 285 KIKNFAKFNEDS---VVKIACSDNILCLATSDDTFKTNAAIDQT----IELNASSIYII 336
Score = 78.7 bits (192), Expect = 8e-16
Identities = 40/280 (14%), Positives = 75/280 (26%), Gaps = 31/280 (11%)
Query: 1728 QVIPLRSA---WVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGF 1784
Q++ + A ++ + S + + D TVY + + + + L Y+
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNV---DLLQSLRYKHP 58
Query: 1785 LSSCRFIDD--TTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTG 1842
L C FID+ + G+ +I+ +L + + +
Sbjct: 59 LLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAA 118
Query: 1843 SVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGS------EDKTARLFDIR 1896
S D ++ D R + N+ + S + + F +
Sbjct: 119 SWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLP 178
Query: 1897 ADQQIAT--YLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTT----------- 1943
+ K + C S D V V
Sbjct: 179 LCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAF 238
Query: 1944 ----HNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVW 1979
N + V SI SP L T+ D + W
Sbjct: 239 RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW 278
Score = 54.5 bits (129), Expect = 7e-08
Identities = 8/77 (10%), Positives = 22/77 (28%), Gaps = 3/77 (3%)
Query: 1914 TSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVL---SGHENRVTSISLSPNGMALVTS 1970
+ + S + S D ++ V+ N L +++ + + N +
Sbjct: 15 SDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYV 74
Query: 1971 SWDQFVKVWQESNTIVW 1987
Q + +
Sbjct: 75 GTVQGEILKVDLIGSPS 91
Score = 51.4 bits (121), Expect = 5e-07
Identities = 10/57 (17%), Positives = 23/57 (40%)
Query: 1947 VLSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003
+ ++ ++ I + P+ L+ +SWD + V++ L K + C
Sbjct: 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC 62
Score = 51.4 bits (121), Expect = 6e-07
Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 1/98 (1%)
Query: 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQ 1744
VNS+ +S + + DG + W+ T K + + V A
Sbjct: 244 NLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDS-VVKIAC 302
Query: 1745 SGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYE 1782
S N + D+ ++ A I + YE
Sbjct: 303 SDNILCLATSDDTFKTNAAIDQTIELNASSIYIIFDYE 340
Score = 28.7 bits (62), Expect = 7.4
Identities = 8/53 (15%), Positives = 16/53 (30%), Gaps = 5/53 (9%)
Query: 1298 LKNHSQRNAVSFHACSTLLASLSSYQYTRKAWKKDAMDLLLDP----ALFQME 1346
++ + V +L +S T K + L+ +F E
Sbjct: 289 FAKFNEDSVVKIACSDNILCLATSDD-TFKTNAAIDQTIELNASSIYIIFDYE 340
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 97.6 bits (241), Expect = 7e-22
Identities = 43/333 (12%), Positives = 90/333 (27%), Gaps = 27/333 (8%)
Query: 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLR--SAWVMSVAFAQSGNF 1748
+ ++ ++ D + ++ I++ QV L+ + V V +A N
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR 65
Query: 1749 VACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTW 1808
+ G D V+ L R ++R +
Sbjct: 66 IVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE 125
Query: 1809 NLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKK----------- 1857
+ + V+S+ P+ GS D C+++ K+
Sbjct: 126 QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWG 185
Query: 1858 -------CVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKN 1910
+ V+ VCF +G A S D T L D +AT ++
Sbjct: 186 SKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATL--ASET 243
Query: 1911 SGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTS 1970
+ + + G D ++ G + S
Sbjct: 244 LPLLAVTFITESSLVAAGHDC-FPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQ 302
Query: 1971 SWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003
+ D+ + + +L K ++ +
Sbjct: 303 NLDKKASSEGSAAAGA----GLDSLHKNSVSQI 331
Score = 96.5 bits (238), Expect = 2e-21
Identities = 56/327 (17%), Positives = 100/327 (30%), Gaps = 28/327 (8%)
Query: 1676 DAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKT--QVIPLR 1733
+ K + LK H +V V ++ DS V+ D +W VI
Sbjct: 35 EKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRI 94
Query: 1734 SAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD 1793
+ V +A + A G + ++ + K I++ LS +
Sbjct: 95 NRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK-PIRSTVLSLDWHPNS 153
Query: 1794 TTLLTGSGDMKIVTWNLETGQ-----------------RIHEVAQAHIGDVVSISLSPDG 1836
L GS D K ++ + + + + G V + S +G
Sbjct: 154 VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG 213
Query: 1837 QYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIR 1896
S D + L D +K V T + +V F A G + LF
Sbjct: 214 SRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFP-VLFTYD 272
Query: 1897 ADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVT 1956
+ ++ +S ++ + D G+ S H+N V+
Sbjct: 273 SAAGKLSFGGRLDVPKQSSQRGLTARERF--QNLDKKASSEGSAAAGA-GLDSLHKNSVS 329
Query: 1957 SISLSPNG----MALVTSSWDQFVKVW 1979
IS+ G T+ D + +W
Sbjct: 330 QISVLSGGKAKCSQFCTTGMDGGMSIW 356
Score = 86.5 bits (212), Expect = 4e-18
Identities = 21/165 (12%), Positives = 49/165 (29%), Gaps = 6/165 (3%)
Query: 1821 QAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKK--CVQTFFGHEADVNSVCFHPSG 1878
+ + + + D + +++ K V H V V + P
Sbjct: 4 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63
Query: 1879 LAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWD 1938
T D+ A ++ ++ T + N + + + GS + +
Sbjct: 64 NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICY 123
Query: 1939 LLKTT----HNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVW 1979
+ + + V S+ PN + L S D +++
Sbjct: 124 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIF 168
Score = 64.5 bits (155), Expect = 4e-11
Identities = 35/232 (15%), Positives = 70/232 (30%), Gaps = 30/232 (12%)
Query: 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRS---------------- 1734
+ V S+ + +S +GS D K I+ + +
Sbjct: 140 IRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSS 199
Query: 1735 --AWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFID 1792
WV V F+ +G+ VA D+ + D + + + L L + FI
Sbjct: 200 SCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM------AVATLASETLPLLAVTFIT 253
Query: 1793 DTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWD 1852
+++L+ D V + ++ + S ++DK
Sbjct: 254 ESSLVAAGHDCFPVLFTYDSAAGK-LSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEG 312
Query: 1853 FREKKCVQTFFGHEADVNSVCFHPSG----LAFATGSEDKTARLFDIRADQQ 1900
H+ V+ + G F T D ++D+R+ +
Sbjct: 313 -SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLES 363
Score = 63.0 bits (151), Expect = 1e-10
Identities = 27/176 (15%), Positives = 53/176 (30%), Gaps = 12/176 (6%)
Query: 1683 MPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAF 1742
V+ V +S + S D + + D + + +++V F
Sbjct: 192 ELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTF 251
Query: 1743 AQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGD 1802
+ VA G D ++ ++ + G L + + + D
Sbjct: 252 ITESSLVAAGH-DCFPVLFTYDS--AAGKLSFGGRLDVPKQSSQRGLTARERF---QNLD 305
Query: 1803 MKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQY----FVTGSVDKSCKLWDFR 1854
K + + + H V IS+ G+ F T +D +WD R
Sbjct: 306 KKASSEG--SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359
Score = 42.5 bits (98), Expect = 4e-04
Identities = 15/89 (16%), Positives = 29/89 (32%), Gaps = 5/89 (5%)
Query: 1685 KKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQ 1744
K S G ++ G + +LD K + + L V ++
Sbjct: 277 KLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAG-AGLDSLHKNSVSQISVLS 335
Query: 1745 SGNF----VACGGMDNMCTVYDLNNRDST 1769
G GMD +++D+ + +S
Sbjct: 336 GGKAKCSQFCTTGMDGGMSIWDVRSLESA 364
Score = 37.1 bits (84), Expect = 0.018
Identities = 5/55 (9%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Query: 1949 SGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003
S ++ + + + + + V ++++S W + + V
Sbjct: 4 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN-KWVQVHELKEHNGQVTGV 57
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 94.6 bits (233), Expect = 2e-21
Identities = 34/297 (11%), Positives = 87/297 (29%), Gaps = 18/297 (6%)
Query: 1684 PKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFA 1743
K++ GH + ++ + +SGS DG+++ W + + ++ S ++S+ +
Sbjct: 5 VLKTISGHNKGITALTVN----PLISGSYDGRIMEWSSSSMHQD-----HSNLIVSLDNS 55
Query: 1744 QSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDM 1803
++ + + D + + + G+ L++ +
Sbjct: 56 KAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLIL-------QS 108
Query: 1804 KIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFF 1863
A + + V++ L V D + ++
Sbjct: 109 FTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYI 168
Query: 1864 GHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGR 1923
+ A + K + +
Sbjct: 169 SISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEED 228
Query: 1924 YIFCGSDDNNVHVWDLLKTTHN-GVLSGHENRVTSISLSPNGMALVTSSWDQFVKVW 1979
+ GS D N+ ++ + + L+ H++ V ++ LV+S D +K W
Sbjct: 229 LVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRW 284
Score = 72.3 bits (175), Expect = 7e-14
Identities = 10/95 (10%), Positives = 31/95 (32%), Gaps = 2/95 (2%)
Query: 1802 DMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFRE-KKCVQ 1860
++ T + + + TGS+D + ++ + K ++
Sbjct: 193 SREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIK 252
Query: 1861 TFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDI 1895
H+ VN++ + + D + +++
Sbjct: 253 ALNAHKDGVNNLLWETPST-LVSSGADACIKRWNV 286
Score = 60.7 bits (145), Expect = 4e-10
Identities = 25/168 (14%), Positives = 59/168 (35%), Gaps = 7/168 (4%)
Query: 1691 HINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVA 1750
+ ++V S + + + + + A ++ + S ++A
Sbjct: 119 LNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIA 178
Query: 1751 CGGMDNMCTVYDLNNRDS------TGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMK 1804
G + +YDL +R+ +K+ ++ I++ + TGS D
Sbjct: 179 AGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTN 238
Query: 1805 IVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWD 1852
I ++++ +I + AH V ++ V+ D K W+
Sbjct: 239 IFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWN 285
Score = 54.2 bits (128), Expect = 6e-08
Identities = 16/126 (12%), Positives = 34/126 (26%), Gaps = 11/126 (8%)
Query: 1855 EKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFT 1914
+ ++T GH + ++ +P +GS D + + Q + +
Sbjct: 2 HDEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHS-------NLIV 50
Query: 1915 SCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQ 1974
S S + Y DD + N ++ N L+
Sbjct: 51 SLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFT 110
Query: 1975 FVKVWQ 1980
+
Sbjct: 111 GDIIKS 116
Score = 53.0 bits (125), Expect = 1e-07
Identities = 38/275 (13%), Positives = 80/275 (29%), Gaps = 52/275 (18%)
Query: 1770 GAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVS 1829
G +V++ + G+ +++ L++GS D +I+ W+ + Q H +VS
Sbjct: 1 GHDEVLKTISGHNKGITALTV---NPLISGSYDGRIMEWSSSSMH------QDHSNLIVS 51
Query: 1830 ISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTF--------------------------- 1862
+ S +Y D + + Q
Sbjct: 52 LDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTG 111
Query: 1863 ---FGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVS 1919
+ S A G E+ +D +++ L + + ++S
Sbjct: 112 DIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISIS 171
Query: 1920 SSGRYIFCGSDDNNVHVWDLLKTT-----------HNGVLSGHENRVTSISLSPNGMALV 1968
S YI G + ++DL +S + +
Sbjct: 172 PSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVA 231
Query: 1969 TSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003
T S D + ++ K++K N K + +
Sbjct: 232 TGSLDTNIFIYSVKRP--MKIIKALNAHKDGVNNL 264
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 89.1 bits (219), Expect = 3e-19
Identities = 35/306 (11%), Positives = 74/306 (24%), Gaps = 38/306 (12%)
Query: 1708 VSGSLDGKLIIWDTWTGNKTQVIPLRSA--WVMSVAFAQSGNFV-ACGGMDNMCTVYDLN 1764
++ + KL++ DT +VI + A M A G A DL
Sbjct: 5 LAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLV 64
Query: 1765 NRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHI 1824
++ G + + + D TL +++ + E + A
Sbjct: 65 TGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET 124
Query: 1825 GDVV----------SISLSPDGQYFVTGSVDKSCKLWDFRE------------------- 1855
++ + DG D +
Sbjct: 125 LSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPD 184
Query: 1856 --KKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGF 1913
Q + D+ + + F
Sbjct: 185 VLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYF 244
Query: 1914 TSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWD 1973
+ AV+ + F N + +DL K + + S+++S +G +
Sbjct: 245 S-TAVNPAKTRAFG--AYNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGAL 300
Query: 1974 QFVKVW 1979
+ +
Sbjct: 301 GDLAAY 306
Score = 70.2 bits (170), Expect = 5e-13
Identities = 29/264 (10%), Positives = 65/264 (24%), Gaps = 31/264 (11%)
Query: 1680 VKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTG-----------NKTQ 1728
+ + + + + + S D + +L + +
Sbjct: 69 LGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128
Query: 1729 VIPLRSAWVMSVAFAQSGNFVACGGMDNMCT----------------VYDLNNRDSTGAA 1772
+ +A+A+ G+ + G D + + A
Sbjct: 129 KAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAV 188
Query: 1773 KVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISL 1832
E G D + ++T +LETG+ + S ++
Sbjct: 189 WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAV 248
Query: 1833 SPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARL 1892
+P + +D + ++ SV G G
Sbjct: 249 NPAKTR--AFGAYNVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGALGDLAA 305
Query: 1893 FDIRADQQIATY-LPPNKNSGFTS 1915
+D ++ LP N + S
Sbjct: 306 YDAETLEKKGQVDLPGNASMSLAS 329
Score = 62.9 bits (151), Expect = 1e-10
Identities = 19/168 (11%), Positives = 48/168 (28%), Gaps = 17/168 (10%)
Query: 1837 QYFVTGSVDKSCKLWDFREKKCVQTFFGHEAD--VNSVCFHPSG-LAFATGSEDKTARLF 1893
Y + + + D + + +A P G +A+AT ++ ++
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 1894 DIRADQQIATYL---PPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLS- 1949
D+ + + P + A+S G+ + + + L
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 1950 ----------GHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVW 1987
++T ++ + +G L D V + +
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVED 169
Score = 59.8 bits (143), Expect = 1e-09
Identities = 21/200 (10%), Positives = 47/200 (23%), Gaps = 19/200 (9%)
Query: 1796 LLTGSGDMKIVTWNLETGQRIHEVA-QAHIGDVVSISLSPDGQY-FVTGSVDKSCKLWDF 1853
+L + K+V + E + + ++P G+ + T + +S D
Sbjct: 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDL 63
Query: 1854 REKKCVQTFFGHEAD-----VNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPN 1908
+ + + + P G A L
Sbjct: 64 VTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE 123
Query: 1909 KN---------SGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSIS 1959
T A + G ++ D +V + ++
Sbjct: 124 TLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPE---AGTLVEDKPIQSWEAETY 180
Query: 1960 LSPNGMALVTSSWDQFVKVW 1979
P+ +A+ V
Sbjct: 181 AQPDVLAVWNQHESSGVMAT 200
Score = 47.1 bits (110), Expect = 1e-05
Identities = 23/178 (12%), Positives = 47/178 (26%), Gaps = 12/178 (6%)
Query: 1662 QADTKLEDVTASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDT 1721
D ++ A P V + + + D + L+ D
Sbjct: 167 VEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL 226
Query: 1722 WTGNKTQVIPLRSAWVMS-VAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLG 1780
TG A + N+ +DL I+ +
Sbjct: 227 ETGEMAMREVRIMDVFYFSTAVNPAKTRAFG--AYNVLESFDLEKN------ASIKRVPL 278
Query: 1781 YEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISL---SPD 1835
+ S D +T+ G + ++ ET ++ +V + S+ + D
Sbjct: 279 PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGNASMSLASVRLFTRD 336
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 87.3 bits (214), Expect = 1e-18
Identities = 40/280 (14%), Positives = 80/280 (28%), Gaps = 16/280 (5%)
Query: 1676 DAPKVKLMPKKSLKGHINK-VNSVHYS--GDSRHCVSGSLDGKLIIWDTWTGNKTQVI-- 1730
D K+ P GH + V +V +S S++ SG GK+I+W ++ +
Sbjct: 46 DDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEV 105
Query: 1731 ------PLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGF 1784
+ + + +++ G + G ++ +V
Sbjct: 106 NVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINAC 165
Query: 1785 LSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSV 1844
+ + G + V + SPD FV
Sbjct: 166 HLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG 225
Query: 1845 DKSCKLW----DFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQ 1900
K ++ FAT D T R++D+ +
Sbjct: 226 SDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKC 285
Query: 1901 IATYLPPNKNSGFTSCAVSSSG-RYIFCGSDDNNVHVWDL 1939
+ + + G V ++G I S D ++ ++L
Sbjct: 286 VQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
Score = 77.6 bits (189), Expect = 2e-15
Identities = 38/306 (12%), Positives = 83/306 (27%), Gaps = 19/306 (6%)
Query: 1693 NKVNSVHYSGDSRHCVSGSLDGKLI-IWDTWTGNKTQVIPLR---SAWVMSVAFA--QSG 1746
N + Y + + D V+ S+ V +V F+ +
Sbjct: 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS 77
Query: 1747 NFVACGGMDN--MCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLL---TGSG 1801
++ G + + + ++ V E G +S + + L
Sbjct: 78 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR 137
Query: 1802 DMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCK---LWDFREKKC 1858
D V + ++G + EV+ +T D S F+
Sbjct: 138 DNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSAS 197
Query: 1859 VQTFFGHEADVNSVCFHPSG--LAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSC 1916
+T + V V F P GS+ K + + G
Sbjct: 198 DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFA 257
Query: 1917 AVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLS---PNGMALVTSSWD 1973
+ D + VWD+ + + + ++ + + +++ S D
Sbjct: 258 LSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD 317
Query: 1974 QFVKVW 1979
+ +
Sbjct: 318 GTLNFY 323
Score = 54.2 bits (128), Expect = 8e-08
Identities = 23/192 (11%), Positives = 42/192 (21%), Gaps = 56/192 (29%)
Query: 1825 GDVVSISLSPDGQYFVTGSVDKSC-KLWDFREKK--CVQTFFGHEAD-VNSVCFHPSGLA 1880
+S P + + D + K V F GH + V +V F P
Sbjct: 18 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK-- 75
Query: 1881 FATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL- 1939
+Y+ G + V VW
Sbjct: 76 ----------------------------------------GSQYLCSGDESGKVIVWGWT 95
Query: 1940 -------LKTTHNGVLSGHENRVTSISLSPNG--MALVTSSWDQFVKVWQESNTIVWKVL 1990
++ ++ IS G + +V D F + +
Sbjct: 96 FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEV 155
Query: 1991 KVYNLEKKTIFC 2002
++
Sbjct: 156 SGHSQRINACHL 167
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 84.6 bits (207), Expect = 7e-18
Identities = 34/263 (12%), Positives = 70/263 (26%), Gaps = 9/263 (3%)
Query: 1684 PKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFA 1743
+ H ++ S +C SG + G + IWDT +
Sbjct: 50 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDI- 108
Query: 1744 QSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDM 1803
+ + S + D
Sbjct: 109 SWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDD 168
Query: 1804 KIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQT-- 1861
V + H V S+ +PDG F + D + L++ +
Sbjct: 169 NTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFE 228
Query: 1862 -----FFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSC 1916
H V + + P G A+ S DKT +++++ + T +P
Sbjct: 229 DDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKT-IPVGTRIEDQQL 287
Query: 1917 AVSSSGRYIFCGSDDNNVHVWDL 1939
+ + + + S + ++ +
Sbjct: 288 GIIWTKQALVSISANGFINFVNP 310
Score = 82.3 bits (201), Expect = 4e-17
Identities = 29/296 (9%), Positives = 75/296 (25%), Gaps = 14/296 (4%)
Query: 1693 NKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACG 1752
+ + + + + T++ S + SG + A G
Sbjct: 18 GTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASG 76
Query: 1753 GMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLET 1812
+ ++ + + + + G + + ++ + G+ + ++
Sbjct: 77 DVHGNVRIW----DTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFL 132
Query: 1813 GQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNS- 1871
S+ E +
Sbjct: 133 FDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFV 192
Query: 1872 --VCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPN-----KNSGFTSCAVSSSGRY 1924
V ++P G FA+ D T L++ + + + + S G
Sbjct: 193 HSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTK 252
Query: 1925 IFCGSDDNNVHVWDLLKTTHNGVLSGHEN-RVTSISLSPNGMALVTSSWDQFVKVW 1979
I S D + +W++ + + + ALV+ S + F+
Sbjct: 253 IASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
Score = 57.2 bits (136), Expect = 7e-09
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 1/83 (1%)
Query: 1905 LPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNG 1964
LP + +G I + +V+ + T + + H ++ T SP+G
Sbjct: 12 LPRTARGTAVVLGNTPAGDKIQYCNG-TSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSG 70
Query: 1965 MALVTSSWDQFVKVWQESNTIVW 1987
+ V++W + T
Sbjct: 71 YYCASGDVHGNVRIWDTTQTTHI 93
Score = 51.4 bits (121), Expect = 5e-07
Identities = 13/87 (14%), Positives = 25/87 (28%), Gaps = 1/87 (1%)
Query: 1678 PKVKLMPKKSLKGHINKVNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRS-AW 1736
V H V + +S D S S D + IW+ T + IP+ +
Sbjct: 224 TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIE 283
Query: 1737 VMSVAFAQSGNFVACGGMDNMCTVYDL 1763
+ + + + +
Sbjct: 284 DQQLGIIWTKQALVSISANGFINFVNP 310
Score = 41.0 bits (94), Expect = 0.001
Identities = 17/116 (14%), Positives = 34/116 (29%), Gaps = 11/116 (9%)
Query: 1698 VHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNM 1757
GD + +DG + + S V + ++ G +A D
Sbjct: 205 ASTGGDGTIVLYNGVDGT---KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKT 261
Query: 1758 CTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFI--DDTTLLTGSGDMKIVTWNLE 1811
++++ KV + + I L++ S + I N E
Sbjct: 262 IKIWNVATL------KVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPE 311
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine dehydrogenase
[Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1| Amine
dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 80.0 bits (196), Expect = 2e-16
Identities = 28/274 (10%), Positives = 52/274 (18%), Gaps = 53/274 (19%)
Query: 1718 IWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRE 1777
++D I + A A
Sbjct: 2 VYDADAKKLLGQID--GGFGPGFAIAPDRKASVVATTY---------------------- 37
Query: 1778 LLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEV--AQAHIGDVVSISLSPD 1835
+ G+ + + T E+ H V S +
Sbjct: 38 ---------------FSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAF 82
Query: 1836 GQ---YFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSG-LAFATGSED-KTA 1890
++ + + V +P+G F E K
Sbjct: 83 SADGKRLYVANITPAASVTVIDAVSKKML--SEIDTAACVLAYPAGDDRFTALCESGKAL 140
Query: 1891 RLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRY---IFCGSDDNNVHVWDLL--KTTHN 1945
+ ++ + A ++ RY + NV D K
Sbjct: 141 TVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPAFG 200
Query: 1946 GVLSGHENRVTSISLSPNGMALVTSSWDQFVKVW 1979
S + + P GM Q
Sbjct: 201 KPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYV 234
Score = 66.6 bits (161), Expect = 7e-12
Identities = 25/287 (8%), Positives = 61/287 (21%), Gaps = 37/287 (12%)
Query: 1684 PKKSLKGHINKVNSV---HYSGDSRHCV---SGSLDGKLIIWDTWTGNKTQVIPLRSAWV 1737
+ V + + S ++ + +K +
Sbjct: 60 HAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAVSKKMLS--EIDTA 117
Query: 1738 MSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDD---T 1794
V +G+ ++ + + + AK +
Sbjct: 118 ACVLAYPAGDDRFTALCESGKALT-VTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKG 176
Query: 1795 TLLTGSGDMKIVTWNLETGQ-RIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDF 1853
L + + + + + + + P G ++
Sbjct: 177 DYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYYVLM 236
Query: 1854 REKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGF 1913
+ G D P + + K A Q++
Sbjct: 237 HKGTD-----GSHKD-------PGTQVWVYDLKSKQRVARWDLAQQKVEP---------L 275
Query: 1914 TSCAVSSSGRYIF--CGSDDNNVHVWDLLKTTHNGVLSGHENRVTSI 1958
S VS + +F + + V V D V N + +
Sbjct: 276 VSIQVSEDDKPLFYGLTATSDLV-VMDARTGALQHVEKQIGNTSSLL 321
Score = 53.5 bits (127), Expect = 1e-07
Identities = 19/209 (9%), Positives = 47/209 (22%), Gaps = 33/209 (15%)
Query: 1671 TASMPDAPKVKLMPKKSLKGHINKVNSVHYSGDSRH---CVSGSLDGKLIIWDTWTGNKT 1727
++ K + I+ + SR+ + + G + D
Sbjct: 139 ALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGDYLFTTYGGNVRSADFSGDKPA 198
Query: 1728 QVIPL--RSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFL 1785
P + + + G +L ++G
Sbjct: 199 FGKPWSLLTDAERAEGWRPGGMQQTAV------------QAKQNRYY-----VLMHKGTD 241
Query: 1786 SSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQY--FVTGS 1843
S + + + V Q++ + SI +S D + + +
Sbjct: 242 GSHKDPGTQVWVYDLKSKQRVARWDLAQQKVEPLV--------SIQVSEDDKPLFYGLTA 293
Query: 1844 VDKSCKLWDFREKKCVQTFFGHEADVNSV 1872
+ D R + +
Sbjct: 294 TSDLV-VMDARTGALQHVEKQIGNTSSLL 321
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 80.6 bits (198), Expect = 5e-16
Identities = 39/290 (13%), Positives = 79/290 (27%), Gaps = 23/290 (7%)
Query: 1708 VSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRD 1767
V+ G++ + D T V+ A V + SG ++ G D + DL ++
Sbjct: 36 VTLRDAGQIALIDGSTYEIKTVLDTGYA-VHISRLSASGRYLFVIGRDGKVNMIDLWMKE 94
Query: 1768 STGAAKVIRELLGYEGFLSSCRFIDDTTLL--TGSGDMKIVTWNLETGQRIH-------- 1817
T A+ I+ +S + + V + ET +
Sbjct: 95 PTTVAE-IKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMT 153
Query: 1818 --EVAQAHIGDVVSISLSPDGQYF-VTGSVDKSCKLWDFREKKCVQTFFGHEADV-NSVC 1873
E V +I S F V L D+ + ++T +
Sbjct: 154 YDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGG 213
Query: 1874 FHPSG-LAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDN 1932
S + + D + + +A + A + G
Sbjct: 214 LDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTF---GPVWA 270
Query: 1933 NVHVWDLLKT---THNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVW 1979
H+ D T + ++ + G +L + ++
Sbjct: 271 TSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLY 320
Score = 72.9 bits (178), Expect = 1e-13
Identities = 35/301 (11%), Positives = 83/301 (27%), Gaps = 25/301 (8%)
Query: 1695 VNSVHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLR-----SAWVMSVAFAQSGNFV 1749
V+ S R+ DGK+ + D W T V ++ + S +
Sbjct: 64 VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYA 123
Query: 1750 -ACGGMDNMCTVYD-----LNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLL--TGSG 1801
A + D ST + E +++
Sbjct: 124 IAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 183
Query: 1802 DMKIVTWNLETGQRIHEVAQAHIGDVVS-ISLSPDGQYFVTGSVDKSCKLWDFREKKCVQ 1860
KI+ + + + + L +YF+T + ++ + ++ +
Sbjct: 184 TGKILLVDYTDLNNLK-TTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLV 242
Query: 1861 TFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAV-- 1918
+ + G T+ + D I T + ++ +
Sbjct: 243 AIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSV-ALIGTDPEGHPDNAWKILDSFP 301
Query: 1919 SSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKV 1978
+ G +F + N+ +++ L+ S+++ + A+ D K
Sbjct: 302 ALGGGSLFIKTHPNSQYLYVDAT------LNPEAEISGSVAV-FDIKAMTGDGSDPEFKT 354
Query: 1979 W 1979
Sbjct: 355 L 355
Score = 67.1 bits (163), Expect = 9e-12
Identities = 23/216 (10%), Positives = 55/216 (25%), Gaps = 9/216 (4%)
Query: 1791 IDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKL 1850
+++ +T +I + T + + + V LS G+Y D +
Sbjct: 30 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY--AVHISRLSASGRYLFVIGRDGKVNM 87
Query: 1851 WDFREKKC-----VQTFFGHEADVNSVCFHPSG-LAFATGSEDKTARLFDIRADQQIATY 1904
D K+ ++ + S A A + D +
Sbjct: 88 IDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQ 147
Query: 1905 LPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNG 1964
I S + ++ +T ++ + +
Sbjct: 148 STRGMTYDEQEYHPEPRVAAIL-ASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAE 206
Query: 1965 MALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTI 2000
L D + + + K++ + E K +
Sbjct: 207 RFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLV 242
Score = 63.3 bits (153), Expect = 2e-10
Identities = 23/191 (12%), Positives = 44/191 (23%), Gaps = 17/191 (8%)
Query: 1819 VAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSG 1878
VA + + VT L D + A V+ SG
Sbjct: 15 VAPEDRPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA-VHISRLSASG 73
Query: 1879 LAFATGSEDKTARLFDIRADQQIATYLPPNKNSGF---TSCAVSSSGRYIF-CGSDDNNV 1934
D + D+ + + TS +Y
Sbjct: 74 RYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQY 133
Query: 1935 HVWDLLKTTHNGVLS-----------GHENRVTSISLSPNGMALVTSSWD-QFVKVWQES 1982
+ D + S E RV +I S + + + + + +
Sbjct: 134 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYT 193
Query: 1983 NTIVWKVLKVY 1993
+ K ++
Sbjct: 194 DLNNLKTTEIS 204
Score = 33.6 bits (76), Expect = 0.28
Identities = 16/182 (8%), Positives = 38/182 (20%), Gaps = 15/182 (8%)
Query: 1698 VHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNM 1757
G R+ ++ + ++ K I + G +
Sbjct: 212 GGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTFGPVWAT 271
Query: 1758 CTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLTGSGDMKIVTWNLETGQRI 1816
+ + + +L + + T
Sbjct: 272 S---HMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPE 328
Query: 1817 HEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHP 1876
E++ S+++ D + D K E + V F+
Sbjct: 329 AEISG-------SVAV-FDIKAMTGDGSDPEFKTLPIAE---WAGITEGQPRVVQGEFNK 377
Query: 1877 SG 1878
G
Sbjct: 378 DG 379
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 79.0 bits (193), Expect = 8e-16
Identities = 35/288 (12%), Positives = 64/288 (22%), Gaps = 42/288 (14%)
Query: 1690 GHINKVNSVHYSGDSRH-CVSGSLDGKLIIWDTWTGNKTQVIPL------RSAWVMSVAF 1742
+ + D+R V + G + D T T L + S A
Sbjct: 37 PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAI 96
Query: 1743 AQSGNFVACGGMDNMCTVYDLN---------NRDSTGAAKVIRELLGYEGFLSSCRFIDD 1793
+ G V + AK +R D
Sbjct: 97 SPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 156
Query: 1794 TTLLTGSGDMKIVTWN------LETGQRIHEVAQAHIGDVV---------------SISL 1832
+ + G K+ L + A
Sbjct: 157 SLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARF 216
Query: 1833 SPDGQYFVTGSVDKSCKLWDFREKKCVQTFFG-HEADVNSVCFHPSGLAFATGSEDKTAR 1891
D Q T + D + K F + P G +
Sbjct: 217 KDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLN-RLA 275
Query: 1892 LFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDL 1939
+D++ + I + + A G ++ G N++ V++
Sbjct: 276 KYDLKQRKLIKAANLDH---TYYCVAFDKKGDKLYLGGTFNDLAVFNP 320
Score = 77.1 bits (188), Expect = 3e-15
Identities = 31/233 (13%), Positives = 62/233 (26%), Gaps = 33/233 (14%)
Query: 1691 HINKVNSVHYSGDSRHCVSGSLDGKLI-------IWDTWTGNKTQVIPLRSAWVMSVAFA 1743
K + + + DG L D TG T +PLR+ W A
Sbjct: 133 LEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRN-WNRKGYSA 191
Query: 1744 QSGNFVACGGMD-NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGD 1802
+ + ++ R D T
Sbjct: 192 PDVLYFWPHQSPRHEFSMLYTIARFKD----------------------DKQDPATADLL 229
Query: 1803 MKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTF 1862
++ +L+TG+ + + SP + G +D +++K ++
Sbjct: 230 YGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAA 288
Query: 1863 FGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTS 1915
+ V F G G +F+ +++ P + T+
Sbjct: 289 -NLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPGGDMSTTT 340
Score = 71.7 bits (174), Expect = 2e-13
Identities = 15/168 (8%), Positives = 44/168 (26%), Gaps = 10/168 (5%)
Query: 1830 ISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTF-FGHEADVNSVCFHPSG-LAFATGSED 1887
+L +Y + + + + D ++ + + P A+ +
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY 61
Query: 1888 KTARLFDIRADQQIATYLPPNKNSGFTSC----AVSSSGRYIFCGSDDNNVHVWDLLKTT 1943
D+ + + A+S G+ ++ + +
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKP 121
Query: 1944 HNGVL----SGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVW 1987
+ G E + P + L+ ++ D + V +
Sbjct: 122 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMD 169
Score = 67.1 bits (162), Expect = 6e-12
Identities = 15/229 (6%), Positives = 36/229 (15%), Gaps = 41/229 (17%)
Query: 1792 DDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQY-FVTGSVDKSCKL 1850
++ + + ++ + + ++PD + +V +
Sbjct: 7 GHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYG 66
Query: 1851 WDFREKKCV------QTFFGHEADVNSVCFHPSGLAFATGSEDKTA------------RL 1892
D K + S P G +
Sbjct: 67 IDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEV 126
Query: 1893 FDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWD--LLKTTHNG---- 1946
F + + G G D + V
Sbjct: 127 FSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNR 186
Query: 1947 --VLSGHENRV--------------TSISLSPNGMALVTSSWDQFVKVW 1979
+ T + T+
Sbjct: 187 KGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 235
Score = 28.6 bits (62), Expect = 8.2
Identities = 4/33 (12%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 1958 ISLSPNGMALVTSSWDQFVKVWQ-ESNTIVWKV 1989
+L ++ +++ + V S+T+
Sbjct: 2 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSC 34
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus
denitrificans [TaxId: 266]}
Length = 355
Score = 78.3 bits (191), Expect = 1e-15
Identities = 29/314 (9%), Positives = 65/314 (20%), Gaps = 49/314 (15%)
Query: 1708 VSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVA----------CGGMDNM 1757
+ + + D G +I ++ + A G+F+A G +
Sbjct: 22 AHFAAVTQQFVIDGEAGRVIGMID--GGFLPNPVVADDGSFIAHASTVFSRIARGERTDY 79
Query: 1758 CTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLL----TGSGDMKIVTWNLETG 1813
V+D T ++ G + S + +LE
Sbjct: 80 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK 139
Query: 1814 QRIHEVAQA------HIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEA 1867
+ DG + E E
Sbjct: 140 AFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEV----FHPEDEF 195
Query: 1868 DVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTS------------ 1915
+N + + D+ + +
Sbjct: 196 LINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVA 255
Query: 1916 --------CAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNG--M 1965
+ + V V D + + SI++S + +
Sbjct: 256 YHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE-MGHEIDSINVSQDEKPL 314
Query: 1966 ALVTSSWDQFVKVW 1979
S+ D+ + +
Sbjct: 315 LYALSTGDKTLYIH 328
Score = 72.1 bits (175), Expect = 2e-13
Identities = 26/215 (12%), Positives = 59/215 (27%), Gaps = 27/215 (12%)
Query: 1684 PKKSLKGHINKVNSVHYSGDSRHCVSGS-LDGKLIIWDTWTGNKTQVIPLRSAWVMSVAF 1742
P + D +G I T + P + A+
Sbjct: 148 PDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH-----PEDEFLINHPAY 202
Query: 1743 AQSGNFVACGGMDNMCTVYDLNNRD---------------STGAAKVIRELLGY--EGFL 1785
+Q + DL++ D + G + + Y
Sbjct: 203 SQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDR 262
Query: 1786 SSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQY--FVTGS 1843
+ +V + +TG+R+ + H ++ SI++S D + + +
Sbjct: 263 IYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH--EIDSINVSQDEKPLLYALST 320
Query: 1844 VDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSG 1878
DK+ + D + +++ + G
Sbjct: 321 GDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355
Score = 65.6 bits (158), Expect = 2e-11
Identities = 23/214 (10%), Positives = 49/214 (22%), Gaps = 31/214 (14%)
Query: 1798 TGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYF----------VTGSVDKS 1847
+ + + E G+ I + G + + ++ DG + G
Sbjct: 23 HFAAVTQQFVIDGEAGRVIGMI---DGGFLPNPVVADDGSFIAHASTVFSRIARGERTDY 79
Query: 1848 CKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAF---------ATGSEDKTARLFDIRAD 1898
+++D +A V +P + S + D+
Sbjct: 80 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGK 139
Query: 1899 QQIATYLPPNKNSGF-----TSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHEN 1953
P+ F T G + H E
Sbjct: 140 AFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH----PEDEF 195
Query: 1954 RVTSISLSPNGMALVTSSWDQFVKVWQESNTIVW 1987
+ + S LV ++ + S+
Sbjct: 196 LINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAK 229
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus
denitrificans [TaxId: 266]}
Length = 368
Score = 77.7 bits (190), Expect = 3e-15
Identities = 25/287 (8%), Positives = 61/287 (21%), Gaps = 49/287 (17%)
Query: 1708 VSGSLDGKLIIWDTWTGNKTQVIPLRSAWVM-------SVAFAQSGNFVACGGM-DNMCT 1759
G + ++D T I L A + S + +
Sbjct: 90 AKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAA 149
Query: 1760 VYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIH-- 1817
+ + F T GS + +L
Sbjct: 150 GLSVPGA------SDDQLTKSASCFHIHPG--AAATHYLGSCPASLAASDLAAAPAAAGI 201
Query: 1818 ---EVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCF 1874
+ A + + G + G+E+ + F
Sbjct: 202 VGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNF 261
Query: 1875 HPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNV 1934
+G ++ + + + C + N
Sbjct: 262 RSAGFQMVAKLKNTDGIM-------------------------ILTVEHSRSCLAAAENT 296
Query: 1935 HVWDLLKTTHNGVLSGHENRVTSISLSPNG--MALVTSSWDQFVKVW 1979
+G +S + + +I + +G S+ + + ++
Sbjct: 297 SSVTASVGQTSGPIS-NGHDSDAIIAAQDGASDNYANSAGTEVLDIY 342
Score = 53.4 bits (127), Expect = 2e-07
Identities = 20/204 (9%), Positives = 49/204 (24%), Gaps = 32/204 (15%)
Query: 1700 YSGDSRHCVSGSLDGKLIIWDTWTGNK------TQVIPLRSAWVMSVAFAQSGNFVACGG 1753
+ G + GS L D Q ++ + G V
Sbjct: 171 HPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA 230
Query: 1754 --------MDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSS------CRFIDDTTLLTG 1799
T+ + + +G G++ + +
Sbjct: 231 SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCL 290
Query: 1800 SGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQY--FVTGSVDKSCKLWDFREKK 1857
+ + GQ ++ + D +I + DG + + + ++D +
Sbjct: 291 AAAENTSSVTASVGQTSGPIS--NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ 348
Query: 1858 CVQTFFGHEADVNSVCFHPSGLAF 1881
+ + P L+
Sbjct: 349 DQSSV--------ELDKGPESLSV 364
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 70.4 bits (171), Expect = 8e-13
Identities = 48/318 (15%), Positives = 91/318 (28%), Gaps = 35/318 (11%)
Query: 1708 VSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNMCTVYDLNNRD 1767
V+ G++ + D + +VI A V + SG ++ G D + DL ++
Sbjct: 36 VTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKE 94
Query: 1768 STGAAKVIRELLGYEGFLSSCRFIDDTTLL--TGSGDMKIVTWNLETGQRIHEVAQ---- 1821
T A+ I+ + SS + + + ET + V+
Sbjct: 95 PTKVAE-IKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMT 153
Query: 1822 ------AHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKC--VQTFFGHEADVNSVC 1873
V +I S + F+ + L + T G +
Sbjct: 154 VDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGG 213
Query: 1874 FHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFC----GS 1929
+ S F T + + D++++ + K A +Y
Sbjct: 214 WDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHL 273
Query: 1930 DDNNVHVWDLLKTTH-------NGVLSGHENRVTSISLSPNGMALV-------TSSWDQF 1975
D ++ + H L G I P L + Q
Sbjct: 274 GDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQS 333
Query: 1976 VKVWQESN-TIVWKVLKV 1992
V V+ N ++VL +
Sbjct: 334 VAVFDLKNLDAKYQVLPI 351
Score = 60.0 bits (144), Expect = 2e-09
Identities = 20/216 (9%), Positives = 63/216 (29%), Gaps = 9/216 (4%)
Query: 1791 IDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKL 1850
+ + +T +I + ++ + + + V +S G+Y + D +
Sbjct: 30 LPNLFSVTLRDAGQIALVDGDSKKIVKVI--DTGYAVHISRMSASGRYLLVIGRDARIDM 87
Query: 1851 WDFREKKC-----VQTFFGHEADVNSVCFHPSG-LAFATGSEDKTARLFDIRADQQIATY 1904
D K+ ++ + +S A + D +
Sbjct: 88 IDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIV 147
Query: 1905 LPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNG 1964
+ I S ++ + ++ +T +++ + +++
Sbjct: 148 STRGMTVDTQTYHPEPRVAAII-ASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAA 206
Query: 1965 MALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTI 2000
L WD + + + KV + + +++
Sbjct: 207 PFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS 242
Score = 56.9 bits (136), Expect = 1e-08
Identities = 29/181 (16%), Positives = 53/181 (29%), Gaps = 9/181 (4%)
Query: 1828 VSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSED 1887
L + VT L D KK V+ A V+ SG D
Sbjct: 24 QLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRD 82
Query: 1888 KTARLFDIRADQQIATY---LPPNKNSGFTSCAVSSSGRYIFCGS-DDNNVHVWDLLKTT 1943
+ D+ A + + S +S RY G+ + D
Sbjct: 83 ARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 142
Query: 1944 HNGVLSGHENRVTSISLSPNG---MALVTSSWDQFVKVWQESNTI-VWKVLKVYNLEKKT 1999
++S V + + P + + +F+ +E+ + + + NL +
Sbjct: 143 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTS 202
Query: 2000 I 2000
I
Sbjct: 203 I 203
Score = 40.3 bits (93), Expect = 0.002
Identities = 12/99 (12%), Positives = 29/99 (29%), Gaps = 3/99 (3%)
Query: 1894 DIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHEN 1953
++R ++ + P + + D + + D V+
Sbjct: 6 EMRESWKV--LVKPEDRPKKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTG-Y 62
Query: 1954 RVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKV 1992
V +S +G L+ D + + KV ++
Sbjct: 63 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI 101
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 63.7 bits (153), Expect = 4e-11
Identities = 35/288 (12%), Positives = 73/288 (25%), Gaps = 12/288 (4%)
Query: 1708 VSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFV-ACGGMDNMCTVYDLNNR 1766
++ S + + D + T IP+ + M + G V N ++ D
Sbjct: 6 IANSESDNISVIDVTSNKVTATIPV-GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 1767 DSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGD 1826
+ G + + + + + + +
Sbjct: 65 NVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-------S 117
Query: 1827 VVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSE 1886
+ ++LSPDG+ + K V + P G +
Sbjct: 118 PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANF 177
Query: 1887 DKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNG 1946
D + + + + + Y+ N T
Sbjct: 178 DSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237
Query: 1947 VLSGHENRVTSISLSPNG-MALVTSSWDQFVKVW-QESNTIVWKVLKV 1992
I+++P+G V S+ V V +NTI + V
Sbjct: 238 ARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTIT-ATMAV 284
Score = 49.5 bits (116), Expect = 2e-06
Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 11/79 (13%)
Query: 1808 WNLETGQRIHEVAQAHIGDVVSISLSPDGQY-FVTGSVDKSCKLWDFREKKCVQTFFGHE 1866
+ T + + D I+++PDG+ +V S + + D T
Sbjct: 229 IDTGTNKITARIP--VGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM---- 282
Query: 1867 ADVNSVCFHPSGLAFATGS 1885
+V +P GS
Sbjct: 283 ----AVGKNPYASGQFIGS 297
Score = 46.8 bits (109), Expect = 1e-05
Identities = 7/58 (12%), Positives = 15/58 (25%), Gaps = 2/58 (3%)
Query: 1839 FVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSG-LAFATGSEDKTARLFDI 1895
++ S + + D K T + P G + + + D
Sbjct: 5 YIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDT 61
Score = 37.5 bits (85), Expect = 0.011
Identities = 7/48 (14%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Query: 1686 KSLKGHINKVNSVHYSGDSRHC-VSGSLDGKLIIWDTWTGNKTQVIPL 1732
+ + + D + V+ S + + DT T T + +
Sbjct: 238 ARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAV 284
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 56.8 bits (135), Expect = 1e-08
Identities = 29/200 (14%), Positives = 53/200 (26%), Gaps = 6/200 (3%)
Query: 1794 TTLLTGSGDMKIVTWNLETGQRIHEVAQ-AHIGDVVSISLSPDGQY-FVTGSVDKSCKLW 1851
T + +I WNL + G V + +SPD +Y +V + +
Sbjct: 5 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAY 64
Query: 1852 DFREKKCVQTFFGHEADVNSVC---FHPSGLAFATGSEDKTARLFDIRADQQIATYLPPN 1908
TF A S+ G GS + D +
Sbjct: 65 RIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV 124
Query: 1909 KNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLS-PNGMAL 1967
+ A S + + +++ VT++ + P M
Sbjct: 125 EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVF 184
Query: 1968 VTSSWDQFVKVWQESNTIVW 1987
+ + S+ VW
Sbjct: 185 HPNEQYAYCVNELNSSVDVW 204
Score = 46.0 bits (107), Expect = 3e-05
Identities = 29/305 (9%), Positives = 68/305 (22%), Gaps = 26/305 (8%)
Query: 1687 SLKGHINKVNSVHYSGDSRHC-VSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMS---VAF 1742
+ +V + S D R+ V + +++ + + SA S ++
Sbjct: 31 QVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHIST 90
Query: 1743 AQSGNFVACGGMDNMCTVYDLNNRDSTG---------------AAKVIRELLGYEGFLSS 1787
G FV G + L
Sbjct: 91 DHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQD 150
Query: 1788 CRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKS 1847
+ + G + + V D
Sbjct: 151 RICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPH 210
Query: 1848 CKLWDFREKKCVQTFFGHEADVNSVCFHPS-GLAFATGSEDKTARLFDIRADQQIATYLP 1906
+ + + F + P +A +F + D + +
Sbjct: 211 GNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 270
Query: 1907 PNKNSGF-TSCAVSSSGRYIF-CGSDDNNVHVWDLLKTTHNGVLSGHENRVTSISLSPNG 1964
V SG+Y+ G +++ V++++ G ++ P
Sbjct: 271 FQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGR----YAVGQGPMW 326
Query: 1965 MALVT 1969
+ +
Sbjct: 327 VVVNA 331
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 46.4 bits (110), Expect = 3e-05
Identities = 24/166 (14%), Positives = 47/166 (28%), Gaps = 21/166 (12%)
Query: 1698 VHYSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMSVAFAQSGNFVACGGMDNM 1757
G ++ T+ IP+ F+A G +
Sbjct: 223 AAAVKAGNFKTIGD-SKVPVVDGRGESEFTRYIPVPKNPHGLNTSPDGKYFIANGKLSPT 281
Query: 1758 CTVYDLNNRDSTGAAKV-IRELLGYEGFL----SSCRFIDD-TTLLTGSGDMKIVTWNLE 1811
+V ++ D K+ +R+ + E L F T D ++ WN+
Sbjct: 282 VSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYTTLFIDSQVCKWNIA 341
Query: 1812 TGQRIHEVAQA--------------HIGDVVSISLSPDGQYFVTGS 1843
+ + + H ++ S DG++ V S
Sbjct: 342 DAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLS 387
>d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase
(phosphotriesterase, DFP) {Squid (Loligo vulgaris)
[TaxId: 6622]}
Length = 314
Score = 42.3 bits (98), Expect = 4e-04
Identities = 23/277 (8%), Positives = 57/277 (20%), Gaps = 26/277 (9%)
Query: 1700 YSGDSRHCVSGSLDGKLIIWDTWTGNKTQVIPLRSAWVMS----VAFAQSGNFVACGGMD 1755
Y V+G G+++ D TG KT + + N + M
Sbjct: 32 YIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR 91
Query: 1756 NMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQR 1815
V + + ++ D
Sbjct: 92 LGLLVVQTDGTFEE----IAKKDSEGRRMQGCNDCAFDYEGNLWITAP----AGEVAPAD 143
Query: 1816 IHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFH 1875
Q G + + T + E + +
Sbjct: 144 YTRSMQEKFGSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSY 203
Query: 1876 PSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVH 1935
+ ++++ ++P G + +++
Sbjct: 204 D-------------IKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIE 250
Query: 1936 VWDLLKTTHNGVLSGHENRVTSISLSPNGMAL-VTSS 1971
V+ + + +++ P + VT
Sbjct: 251 VFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEH 287
>d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila
melanogaster) [TaxId: 7227]}
Length = 279
Score = 41.2 bits (95), Expect = 9e-04
Identities = 20/247 (8%), Positives = 68/247 (27%), Gaps = 10/247 (4%)
Query: 1740 VAFAQSGNFVACGGMDNMCTVYDLNNRDSTGAAKVIRELLGYEGFLSSCRFIDDT-TLLT 1798
VA + + ++ ++D R + + + ++T
Sbjct: 28 VAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVT 87
Query: 1799 GSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTGSVDKSCKLWDFREKKC 1858
+ + GQ + + + +++ G+ V ++D
Sbjct: 88 ERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVL 147
Query: 1859 VQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLPPNKNSGFTSCAV 1918
+ + + Q + + +
Sbjct: 148 HKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGI 207
Query: 1919 SSSGRYIFCGSDDNN-VHVWD----LLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWD 1973
+S+G + + +N + ++ L+ + + ++L +G +V +S D
Sbjct: 208 NSNGEILIADNHNNFNLTIFTQDGQLISALESK---VKHAQCFDVALMDDGS-VVLASKD 263
Query: 1974 QFVKVWQ 1980
+ +++
Sbjct: 264 YRLYIYR 270
Score = 30.4 bits (67), Expect = 1.9
Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 2/67 (2%)
Query: 1788 CRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVA-QAHIGDVVSISLSPDGQYFVTGSVDK 1846
+ L+ + + +T + GQ I + + ++L DG + S D
Sbjct: 206 GINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDY 264
Query: 1847 SCKLWDF 1853
++ +
Sbjct: 265 RLYIYRY 271
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 38.5 bits (88), Expect = 0.006
Identities = 22/157 (14%), Positives = 46/157 (29%), Gaps = 5/157 (3%)
Query: 1829 SISLSPDGQYFVTGSVDKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDK 1888
+++ +PDG FVT ++ Q E V+ + F +G ATG
Sbjct: 32 NLASAPDGTIFVTNHEVG--EIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNAD 89
Query: 1889 TARLFDIRADQQIATYLPPNKNSGFTSC-AVSSSGRYIFCGSDDNNVHVWDLLKTTHNGV 1947
+ + + L ++ F + S +Y+ D +W + +G
Sbjct: 90 SIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTA--DSYRGAIWLIDVVQPSGS 147
Query: 1948 LSGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNT 1984
+ + + A +
Sbjct: 148 IWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEK 184
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal
domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 38.6 bits (88), Expect = 0.007
Identities = 28/228 (12%), Positives = 56/228 (24%), Gaps = 20/228 (8%)
Query: 1789 RFIDDTTLLTGSGDMKIVTWNLETGQRI----HEVAQAHIGDVVSISLSPDGQYFVTGSV 1844
R+I D L + I+ +N E G + + S+SPDGQ+ +
Sbjct: 23 RWISDHEYLYKQEN-NILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYN 81
Query: 1845 DKSCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKT---------ARLFDI 1895
K W + ++ + + P+ + T S +
Sbjct: 82 YV--KQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIE 139
Query: 1896 RADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRV 1955
++ + +F +W T ++ V
Sbjct: 140 PNLPSYRITWTGKEDIIYNGITDWVYEEEVF----SAYSALWWSPNGTFLAYAQFNDTEV 195
Query: 1956 TSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTIFCV 2003
I S + V + V N + +
Sbjct: 196 PLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN 243
Score = 28.5 bits (62), Expect = 8.4
Identities = 9/68 (13%), Positives = 20/68 (29%), Gaps = 13/68 (19%)
Query: 1797 LTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFV---TGSVDKSCKLWDF 1853
L+ + ++ L S+S S + +Y+ +G L
Sbjct: 398 LSDYTKVTCLSCELNP----------ERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSS 447
Query: 1854 REKKCVQT 1861
K ++
Sbjct: 448 VNDKGLRV 455
>d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 281
Score = 33.2 bits (74), Expect = 0.27
Identities = 23/232 (9%), Positives = 58/232 (25%), Gaps = 19/232 (8%)
Query: 1783 GFLSSCRFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGDVVSISLSPDGQYFVTG 1842
L + D + D + +L++G +++G + + PDG+
Sbjct: 3 NLLLNPDIHGDRIIFVCCDD--LWEHDLKSGS--TRKIVSNLGVINNARFFPDGRKIAIR 58
Query: 1843 SVDKS-------CKLWDFREKKCVQTFFG-----HEADVNSVCFHPSG--LAFATGSEDK 1888
+ S + T+F + F P G + +
Sbjct: 59 VMRGSSLNTADLYFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPF 118
Query: 1889 TARLFDIRADQQIATYLPPNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVL 1948
++ R + ++P N T + R I + + T +
Sbjct: 119 SSMTCLYRVENDGINFVPLN-LGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWI 177
Query: 1949 SGHENRVTSISLSPNGMALVTSSWDQFVKVWQESNTIVWKVLKVYNLEKKTI 2000
+ I ++ + + + + +
Sbjct: 178 EVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKH 229
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 33.4 bits (75), Expect = 0.29
Identities = 26/217 (11%), Positives = 57/217 (26%), Gaps = 37/217 (17%)
Query: 1789 RFIDDTTLLTGSGDMKIVTWNLETGQRIHEVAQAHIGD--VVSISLSPDGQYFVTGSVDK 1846
++I DT + + WN+ET + I + +SPD +Y + +
Sbjct: 23 KWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVE 82
Query: 1847 SCKLWDFREKKCVQTFFGHEADVNSVCFHPSGLAFATGSEDKTARLFDIRADQQIATYLP 1906
++ + G A Q A + P
Sbjct: 83 --PIYQHSYTGYYVLS-----KI------------PHGDPQSLDPPEVSNAKLQYAGWGP 123
Query: 1907 PNKNSGFTSCAVSSSGRYIFCGSDDNNVHVWDLLKTTHNGVLSGHENRV---------TS 1957
+ F I+ + + + + +G + + +
Sbjct: 124 KGQQLIFIFE------NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIA 177
Query: 1958 ISLSPNGMALVTSSWDQF-VKVWQESNTIVWKVLKVY 1993
SP+G L ++ + V + + V
Sbjct: 178 HWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVK 214
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 584
Score = 32.1 bits (72), Expect = 0.79
Identities = 23/235 (9%), Positives = 69/235 (29%), Gaps = 40/235 (17%)
Query: 943 LKTNIPADYAITQMEALTILCHYCLLDSAQPF-NQPLHGNVMYHVSEKYNKSLKDISSKA 1001
L+ P + + L P + H N V + + S+
Sbjct: 257 LQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHHDSEP 316
Query: 1002 NNVGKSGKKIVAVTSLSSGDNQCVTEKKRVNQNIYHDGIDTY----TTYSKNLSLLQNIS 1057
N + ++ ++ L + N+ + +++ ++ + ++ +I
Sbjct: 317 NLLVRACNQLG--QFLQHRET-----------NLRYLALESMCTLASSEFSHEAVKTHIE 363
Query: 1058 VFVNPFSTDNSTSMM-----------NNDFDDYFVEEKKDGTSTTSTELIAMPIDTLVQT 1106
+N T+ S+ + V E T + + +V
Sbjct: 364 TVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSYLETADYSIR----EEIVLK 419
Query: 1107 IHQVIRSTTINMEPSMRMEVSVLELLLHYIQLTPSTALAESWPSLLLLLREGPSL 1161
+ + ++ ++ +L+ I++ E W ++ ++ +
Sbjct: 420 VAILAEKYAVDYT-------WYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDV 467
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 30.8 bits (68), Expect = 1.6
Identities = 14/104 (13%), Positives = 28/104 (26%), Gaps = 5/104 (4%)
Query: 1880 AFATGSEDKTARLFDIRADQQIATYLPPNKNS--GFT--SCAVSSSGRYIFCGSDDNNVH 1935
F +G + + ++ Q T P + S G G+ + N+
Sbjct: 6 LFYSGKSNSAVPIIS-ESELQTITAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIF 64
Query: 1936 VWDLLKTTHNGVLSGHENRVTSISLSPNGMALVTSSWDQFVKVW 1979
+ H+ +I + +G V D
Sbjct: 65 KINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGG 108
>d1t6ua_ a.24.22.1 (A:) Nickel-containing superoxide dismutase,
NiSOD {Streptomyces coelicolor [TaxId: 1902]}
Length = 117
Score = 29.0 bits (65), Expect = 2.4
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 604 HVLLYCGVYDSARTQYTLQTIRNMI 628
H L CGVYD A+ + ++++ +
Sbjct: 1 HCDLPCGVYDPAQARIEAESVKAVQ 25
>d1woha_ c.42.1.1 (A:) Agmatinase {Deinococcus radiodurans [TaxId:
1299]}
Length = 303
Score = 29.9 bits (66), Expect = 3.2
Identities = 10/44 (22%), Positives = 17/44 (38%), Gaps = 7/44 (15%)
Query: 1741 AFAQSGNFVACGGMDNMCTV---YDLNNRDSTGAAKVIRELLGY 1781
A A + V G+D + + D R A+++ E L
Sbjct: 258 AAAANNTVV---GLD-LVELAPNLDPTGRSELLMARLVMETLCE 297
>d2ceva_ c.42.1.1 (A:) Arginase {Bacillus caldovelox [TaxId: 33931]}
Length = 298
Score = 29.5 bits (65), Expect = 4.6
Identities = 6/43 (13%), Positives = 16/43 (37%), Gaps = 5/43 (11%)
Query: 1741 AFAQSGNFVACGGMD--NMCTVYDLNNRDSTGAAKVIRELLGY 1781
A++ + + + D N+ ++ A ++ L G
Sbjct: 256 MLAEAQIIT---SAEFVEVNPILDERNKTASVAVALMGSLFGE 295
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus
thermophilus, strain hb27 [TaxId: 274]}
Length = 110
Score = 27.6 bits (61), Expect = 5.4
Identities = 17/99 (17%), Positives = 35/99 (35%), Gaps = 8/99 (8%)
Query: 1580 RKAWKKDAMDLLLDPALFQMELRCLRAWKSIVDNLMSQEPATFRDLMMKPTSSINIYLKL 1639
+A ++ + L L+ L + K + + E + K L
Sbjct: 15 HRAIREKGVALDLEALLALDREV--QELKKRLQEVQ-TERNQVAKRVPKAPPEEKEALIA 71
Query: 1640 QTAELKKELTQLIDKCKEEQAKQADTKLEDVTASMPDAP 1678
+ L +E +L EE ++ + +LE + +P P
Sbjct: 72 RGKALGEEAKRL-----EEALREKEARLEALLLQVPLPP 105
>d1k5db_ b.55.1.3 (B:) Ran-binding protein 1, Ranbp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 146
Score = 27.6 bits (61), Expect = 9.9
Identities = 4/26 (15%), Positives = 14/26 (53%)
Query: 1637 LKLQTAELKKELTQLIDKCKEEQAKQ 1662
++ AE ++ ++C++E ++
Sbjct: 119 IRFLNAENAQKFKTKFEECRKEIEER 144
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.129 0.376
Gapped
Lambda K H
0.267 0.0499 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 6,958,233
Number of extensions: 315793
Number of successful extensions: 1104
Number of sequences better than 10.0: 1
Number of HSP's gapped: 798
Number of HSP's successfully gapped: 164
Length of query: 2004
Length of database: 2,407,596
Length adjustment: 99
Effective length of query: 1905
Effective length of database: 1,048,326
Effective search space: 1997061030
Effective search space used: 1997061030
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.4 bits)