RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy875
(480 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 96.6 bits (239), Expect = 2e-22
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
Query: 387 TALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADPND 446
T LHVA+ G+L +V++LL++G V + PLH AA GHT++ + L+ A N
Sbjct: 2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN- 60
Query: 447 KVQDSAGWLPLHEAANHGHTDIVQALVSAGAEV 479
+ PLH AA GHT++V+ L+ A
Sbjct: 61 -AKAKDDQTPLHCAARIGHTNMVKLLLENNANP 92
Score = 79.6 bits (195), Expect = 1e-16
Identities = 36/87 (41%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 386 ETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADPN 445
T LHVA+ GN+ LV+ LL+ V + G+ PLH+AA GHTDIV L+ GA PN
Sbjct: 298 YTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPN 357
Query: 446 DKVQDSAGWLPLHEAANHGHTDIVQAL 472
S G PL A G+ + L
Sbjct: 358 --EVSSDGTTPLAIAKRLGYISVTDVL 382
Score = 74.2 bits (181), Expect = 6e-15
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 31/128 (24%)
Query: 384 RGETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGAD 443
+ ET LH+AA G+ + + LL+ V + PLH AA GHT++V+ L+ A+
Sbjct: 32 KVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNAN 91
Query: 444 PNDK-------------------------------VQDSAGWLPLHEAANHGHTDIVQAL 472
PN G+ PLH AA +G + + L
Sbjct: 92 PNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELL 151
Query: 473 VSAGAEVS 480
+ A +
Sbjct: 152 LERDAHPN 159
Score = 72.3 bits (176), Expect = 2e-14
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 31/126 (24%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADP 444
G T LH+AA G+ +V LL + + + +G PLH A GH + L+ G
Sbjct: 231 GVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV 290
Query: 445 N-------------------------------DKVQDSAGWLPLHEAANHGHTDIVQALV 473
+ + G+ PLH+AA GHTDIV L+
Sbjct: 291 DATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLL 350
Query: 474 SAGAEV 479
GA
Sbjct: 351 KNGASP 356
Score = 69.6 bits (169), Expect = 2e-13
Identities = 31/129 (24%), Positives = 45/129 (34%), Gaps = 35/129 (27%)
Query: 384 RGETALHVAAARGNLTLVQSLLKQ---------------------------------GHP 410
+T LH AA G+ +V+ LL+
Sbjct: 65 DDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEAS 124
Query: 411 VKVQDSAGWLPLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAANHGHTDIVQ 470
G+ PLH AA +G + + L+ A PN G PLH A +H + DIV+
Sbjct: 125 QACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPN--AAGKNGLTPLHVAVHHNNLDIVK 182
Query: 471 ALVSAGAEV 479
L+ G
Sbjct: 183 LLLPRGGSP 191
Score = 68.8 bits (167), Expect = 4e-13
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADP 444
G T LHVAA G + + + LL++ G PLH A +H + DIV+ L+ G P
Sbjct: 132 GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP 191
Query: 445 NDKVQDSAGWLPLHEAANHGHTDIVQALVS 474
+ G+ PLH AA ++ ++L+
Sbjct: 192 HSP--AWNGYTPLHIAAKQNQVEVARSLLQ 219
Score = 60.0 bits (144), Expect = 2e-10
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQAL 437
G + LH AA +G+ +V LLK G S G PL A G+ + L
Sbjct: 330 GYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 382
Score = 57.3 bits (137), Expect = 1e-09
Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADP 444
G T LH+AA + + + +SLL+ G + G PLH AA GH ++V L+S A+
Sbjct: 198 GYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANG 257
Query: 445 NDKVQDSAGWLPLHEAANHGHTDIVQALVSAGAEV 479
N + + +G PLH A GH + L+ G V
Sbjct: 258 N--LGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV 290
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 83.0 bits (204), Expect = 5e-18
Identities = 31/165 (18%), Positives = 56/165 (33%), Gaps = 9/165 (5%)
Query: 318 SHFLIKRNDKDSNLNLYNIESITISRNRLGAQEVRKLLSLLNADLLVHLNLSATLETPTT 377
HF+ L+ I + + ++VR+LL L A + + +
Sbjct: 29 QHFISANELSLMTLSYKEAIHIFLPGTK-NMEQVRQLLCLYYAHYNRNA-----KQLWSD 82
Query: 378 SLLEKPRGETALHVAAARGN---LTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIV 434
+ + + E VAA G L + LL VKV + + AA +GH ++
Sbjct: 83 AHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVL 142
Query: 435 QALVSAGADPNDKVQDSAGWLPLHEAANHGHTDIVQALVSAGAEV 479
L + + + AA +GH ++ L
Sbjct: 143 NRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTE 187
Score = 61.4 bits (148), Expect = 6e-11
Identities = 16/99 (16%), Positives = 36/99 (36%), Gaps = 3/99 (3%)
Query: 385 GETALHVAAARGNLTLVQSLLKQG--HPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGA 442
A +AA G+L ++ L + + + + + AA +GH ++ L
Sbjct: 126 NYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAP 185
Query: 443 DPND-KVQDSAGWLPLHEAANHGHTDIVQALVSAGAEVS 480
+Q + A GH +++ L+ ++
Sbjct: 186 TEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA 224
Score = 57.6 bits (138), Expect = 1e-09
Identities = 20/162 (12%), Positives = 40/162 (24%), Gaps = 21/162 (12%)
Query: 325 NDKDSNLNLYNIESITISRNRLGAQEVRKLL---------SLLNADLLVHLNLSATLETP 375
+ + + N + + G V L + ++ ++ +
Sbjct: 186 TEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARH 245
Query: 376 TTSLLEKPRGETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQ 435
L E A ++ G LV +Q L + D ++
Sbjct: 246 VNRLKE---MHDAFKLSNPDGVFDLVT------KSECLQGFYMLRNLIRRNDEVLLDDIR 296
Query: 436 ALVSAGADPNDK---VQDSAGWLPLHEAANHGHTDIVQALVS 474
L+S L A G+ L+S
Sbjct: 297 FLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLS 338
Score = 46.8 bits (110), Expect = 3e-06
Identities = 13/100 (13%), Positives = 28/100 (28%), Gaps = 13/100 (13%)
Query: 379 LLEKPR-GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQAL 437
LL+ P A G + + + + + + G D+V
Sbjct: 216 LLDCPVMLAYAEIHEFEYGEKYVNPFIARHVN----RLKEMHDAFKLSNPDGVFDLV--- 268
Query: 438 VSAGADPNDKVQDSAGWLPLHEAANHGHTDIVQALVSAGA 477
++ +Q L + D ++ L+S
Sbjct: 269 -----TKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPG 303
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 77.9 bits (190), Expect = 1e-16
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 3/93 (3%)
Query: 381 EKPRGETALHVAAARGNLTLVQSL-LKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVS 439
EK +G TALH AA N+ +V+ L ++G QD G P+ AA G ++V L+
Sbjct: 183 EKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQ 242
Query: 440 AGADPNDKVQDSAGWLPLHEAANHGHTDIVQAL 472
GA D+ A + H +IV
Sbjct: 243 QGASVE--AVDATDHTARQLAQANNHHNIVDIF 273
Score = 57.1 bits (136), Expect = 1e-09
Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 14/92 (15%)
Query: 386 ETALHVA-AARGNLTLVQSLLKQGHPVKVQDSA-GWLPLHEAANHGHTDIVQALV----- 438
E+ + + A G+ + + + ++ V + D LH A++ + + L+
Sbjct: 1 ESPIKLHTEAAGSYAITEPITRES--VNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAK 58
Query: 439 ---SAGADPNDKVQDSAGWLPLHEAANHGHTD 467
+AGAD N D PL A
Sbjct: 59 ECIAAGADVNAM--DCDENTPLMLAVLARRRR 88
Score = 51.3 bits (121), Expect = 9e-08
Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 4/59 (6%)
Query: 420 LPLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAANHGHTDIVQALVSAGAE 478
+ LH A G I + + + D LH A++ + + L+ A+
Sbjct: 4 IKLHTEAA-GSYAITEPITRESVNIID---PRHNRTVLHWIASNSSAEKSEDLIVHEAK 58
Score = 49.7 bits (117), Expect = 2e-07
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Query: 407 QGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAANHGHT 466
+ G LH AA + IV+ LV DK QD G P+ AA G
Sbjct: 176 GAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK-QDEDGKTPIMLAAQEGRI 234
Query: 467 DIVQALVSAGAEV 479
++V L+ GA V
Sbjct: 235 EVVMYLIQQGASV 247
Score = 41.3 bits (95), Expect = 2e-04
Identities = 17/100 (17%), Positives = 34/100 (34%), Gaps = 10/100 (10%)
Query: 385 GETALHVAAARGNLTLVQSLL--------KQGHPVKVQDSAGWLPLHEAANHGHTDIVQA 436
T LH A+ + + L+ G V D PL A +V
Sbjct: 33 NRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVA- 91
Query: 437 LVSAGADPNDKVQDSAGWLPLHEAANHGHTDIVQALVSAG 476
A + + + + LH+AA + ++ ++++
Sbjct: 92 -YLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNST 130
Score = 31.2 bits (69), Expect = 0.22
Identities = 5/23 (21%), Positives = 9/23 (39%)
Query: 384 RGETALHVAAARGNLTLVQSLLK 406
TA +A A + +V +
Sbjct: 253 TDHTARQLAQANNHHNIVDIFDR 275
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 76.5 bits (187), Expect = 3e-16
Identities = 31/134 (23%), Positives = 42/134 (31%), Gaps = 41/134 (30%)
Query: 385 GETALHVAAARGNLTLVQ--------------------------------------SLLK 406
G TAL AA +G++ +++ LL
Sbjct: 148 GATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLD 207
Query: 407 QGHPVKVQDSAGWLPLHEAANHGHTDIVQALVS-AGADPNDKVQDSAGWLPLHEAANHGH 465
G V V+ G PL A H +VQ L+ + ND DS G L A
Sbjct: 208 HGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDT--DSDGKTALLLAVELKL 265
Query: 466 TDIVQALVSAGAEV 479
I + L GA
Sbjct: 266 KKIAELLCKRGAST 279
Score = 66.1 bits (160), Expect = 1e-12
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 384 RGETALHVAAARGNLTLVQSLLKQ-GHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGA 442
RG+T L +A + +L LVQ LL+Q + DS G L A I + L GA
Sbjct: 218 RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA 277
Query: 443 DPNDK 447
+
Sbjct: 278 STDCG 282
Score = 60.0 bits (144), Expect = 1e-10
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 421 PLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAANHGHTDIVQ 470
L +A + D+VQ L+ GA+ N + ++ GW PLH A DIV+
Sbjct: 8 LLIKAVQNEDVDLVQQLLEGGANVNFQ-EEEGGWTPLHNAVQMSREDIVE 56
Score = 53.0 bits (126), Expect = 2e-08
Identities = 27/93 (29%), Positives = 40/93 (43%), Gaps = 3/93 (3%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDS-AGWLPLHEAANHGHTDIVQALVSAGAD 443
L A ++ LVQ LL+ G V Q+ GW PLH A DIV+ L+
Sbjct: 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR--HG 62
Query: 444 PNDKVQDSAGWLPLHEAANHGHTDIVQALVSAG 476
+ ++ G P AA G +++ +S G
Sbjct: 63 ADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKG 95
Score = 48.4 bits (114), Expect = 7e-07
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 13/108 (12%)
Query: 385 GETALHVAAARGNLTLVQSLLKQG----------HPVKVQDSAGWLPLHEAANHGHTDIV 434
G TA AA G + ++ L K+G + G L +AA GH +++
Sbjct: 105 GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVL 164
Query: 435 QALVS-AGADPN--DKVQDSAGWLPLHEAANHGHTDIVQALVSAGAEV 479
+ L+ GAD N D + +A L + + I L+ GA+V
Sbjct: 165 KILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV 212
Score = 48.4 bits (114), Expect = 7e-07
Identities = 30/137 (21%), Positives = 46/137 (33%), Gaps = 42/137 (30%)
Query: 385 GETALHVAAARGNLTLVQSLL---------------------------------KQGHPV 411
G T LH A +V+ LL +G V
Sbjct: 39 GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV 98
Query: 412 KVQDSAGWLPLHEAANHGHTDIVQALVSAGADPNDK--------VQDSAGWLPLHEAANH 463
D G+ EAA +G ++ L GA+ N + G L +AA
Sbjct: 99 NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 158
Query: 464 GHTDIVQALVS-AGAEV 479
GH ++++ L+ GA+V
Sbjct: 159 GHVEVLKILLDEMGADV 175
Score = 35.7 bits (81), Expect = 0.009
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQD 415
G+TAL +A + + L K+G D
Sbjct: 253 GKTALLLAVELKLKKIAELLCKRGASTDCGD 283
Score = 35.3 bits (80), Expect = 0.012
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 456 PLHEAANHGHTDIVQALVSAGAEV 479
L +A + D+VQ L+ GA V
Sbjct: 8 LLIKAVQNEDVDLVQQLLEGGANV 31
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 73.7 bits (179), Expect = 1e-15
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Query: 389 LHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADPNDKV 448
L A +L++VQ LL+ G V Q +G LH A+ G +V+ LV +GAD + +
Sbjct: 148 LIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSS--L 205
Query: 449 QDSAGWLPLHEAANHGHTDIVQ 470
++ PL A + DI++
Sbjct: 206 KNCHNDTPLMVARSRRVIDILR 227
Score = 55.6 bits (132), Expect = 2e-09
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQ 435
G +ALH A+ RG L LV++L++ G +++ PL A + DI++
Sbjct: 177 GSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227
Score = 50.6 bits (119), Expect = 1e-07
Identities = 14/52 (26%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
Query: 418 GWLPLHEAANHGHTDIVQALVS----AGADPNDKVQDSAGWLPLHEAANHGH 465
G PLH A G+ V LV+ G + + + ++ PLH A
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELD--IYNNLRQTPLHLAVITTL 52
Score = 48.7 bits (114), Expect = 4e-07
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 385 GETALHVAAARGNLTLVQSLLKQ----GHPVKVQDSAGWLPLHEAANHGHTDIVQALVSA 440
G+T LH+A +GNL V L+ G + + ++ PLH A +V+ LV+A
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62
Query: 441 GADPNDKVQDSAGWLPLHEAANHGHTDIVQALVSAGA 477
GA P + H A H ++AL+ + A
Sbjct: 63 GASPMALDRHG--QTAAHLACEHRSPTCLRALLDSAA 97
Score = 42.1 bits (97), Expect = 5e-05
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 419 WLPLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAANHGHTDIVQALVSAGAE 478
PL A + +VQ L+ GA+ N ++ G LH A+ G +V+ LV +GA+
Sbjct: 145 RSPLIHAVENNSLSMVQLLLQHGANVNAQMYS--GSSALHSASGRGLLPLVRTLVRSGAD 202
Query: 479 VS 480
S
Sbjct: 203 SS 204
Score = 36.7 bits (83), Expect = 0.003
Identities = 11/31 (35%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
Query: 453 GWLPLHEAANHGHTDIVQALVS----AGAEV 479
G PLH A G+ V LV+ G E+
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGREL 33
Score = 29.4 bits (64), Expect = 0.78
Identities = 5/19 (26%), Positives = 11/19 (57%)
Query: 384 RGETALHVAAARGNLTLVQ 402
+T L VA +R + +++
Sbjct: 209 HNDTPLMVARSRRVIDILR 227
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 68.5 bits (166), Expect = 9e-14
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 3/89 (3%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADP 444
TA+H AAA+GNL ++ LL +QD+ G PLH A + + + LVS GA
Sbjct: 136 EATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASI 195
Query: 445 NDKVQDSAGWLPLHEAANHGHTDIVQALV 473
+++ PL A G I++ +V
Sbjct: 196 Y--IENKEEKTPLQVAKG-GLGLILKRMV 221
Score = 56.1 bits (134), Expect = 1e-09
Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADP 444
TALH A + G+ +V+ LL+ G PV +D AGW PLH AA+ G +IV+AL+ GA
Sbjct: 37 SRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQV 96
Query: 445 NDKVQDSAGWLPLHEAANHGHTDIVQALVSAGAEV 479
N + G PLH AA+ +I L+ GA
Sbjct: 97 N--AVNQNGCTPLHYAASKNRHEIAVMLLEGGANP 129
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 67.8 bits (164), Expect = 3e-13
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADP 444
G TALHVAAA+G +++ L++ + V ++D GW PLH AA+ G + + LV D
Sbjct: 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM 258
Query: 445 NDKVQDSAGWLPLHEAA--NHGHTDIVQA 471
+ G A G+ + +Q
Sbjct: 259 E--AVNKVGQTAFDVADEDILGYLEELQK 285
Score = 60.5 bits (145), Expect = 9e-11
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 404 LLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAANH 463
L +G LH AA G+T++++ L+ A D N K D GW PLH AA+
Sbjct: 185 LNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYD--GWTPLHAAAHW 242
Query: 464 GHTDIVQALVSAGAEVS 480
G + + LV ++
Sbjct: 243 GKEEACRILVENLCDME 259
Score = 52.4 bits (124), Expect = 4e-08
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 402 QSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAA 461
+ + + KV+ G A + G T+ V L+ GAD N + G LH+A
Sbjct: 25 EPPVVKRKKTKVKFDDGA-VFLAACSSGDTEEVLRLLERGADIN--YANVDGLTALHQAC 81
Query: 462 NHGHTDI 468
+ D+
Sbjct: 82 IDDNVDM 88
Score = 49.7 bits (117), Expect = 2e-07
Identities = 11/49 (22%), Positives = 20/49 (40%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDI 433
A + G+ V LL++G + + G LH+A + D+
Sbjct: 40 DGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDM 88
Score = 34.3 bits (77), Expect = 0.028
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 456 PLHEAANHGHTDIVQALVSAGAEV 479
A + G T+ V L+ GA++
Sbjct: 43 VFLAACSSGDTEEVLRLLERGADI 66
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 63.3 bits (152), Expect = 4e-12
Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADP 444
G+TALH AAA N V LL QD PL AA G + +AL+ A+
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANR 182
Query: 445 NDKVQDSAGWLPLHEAANHGHTDIVQAL 472
+ D LP A+ H DIV+ L
Sbjct: 183 E--ITDHMDRLPRDVASERLHHDIVRLL 208
Score = 50.9 bits (120), Expect = 6e-08
Identities = 12/40 (30%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 433 IVQALVSAGADPNDKVQDSAGWLPLHEAANHGHTDIVQAL 472
++ L++ GA+ N D G LH AA D + L
Sbjct: 4 VISDLLAQGAELNAT-MDKTGETSLHLAARFARADAAKRL 42
Score = 40.5 bits (93), Expect = 2e-04
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 400 LVQSLLKQGHPV-KVQDSAGWLPLHEAANHGHTDIVQAL 437
++ LL QG + D G LH AA D + L
Sbjct: 4 VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRL 42
Score = 36.3 bits (82), Expect = 0.004
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Query: 404 LLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAANH 463
L+ + D++G LH AA +T+ V L+ A+ + QD PL AA
Sbjct: 109 LITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDA--QDDKDETPLFLAARE 166
Query: 464 GHTDIVQALVSAGAEV 479
G + +AL+ A
Sbjct: 167 GSYEASKALLDNFANR 182
Score = 31.3 bits (69), Expect = 0.16
Identities = 17/46 (36%), Positives = 21/46 (45%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGH 430
GET+LH+AA + LL G QD+ G PLH A
Sbjct: 23 GETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADA 68
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 63.5 bits (153), Expect = 8e-12
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 385 GETALHVAAARGNLTLVQSLLKQ---GHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAG 441
E+ + +++++L + + + QDS G L+ AA G+ IV AL+ G
Sbjct: 223 KESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYG 282
Query: 442 ADPNDKVQDSAGWLPLHEAA 461
ADP + + +G P+ A
Sbjct: 283 ADPF--IANKSGLRPVDFGA 300
Score = 54.3 bits (129), Expect = 9e-09
Identities = 33/248 (13%), Positives = 71/248 (28%), Gaps = 7/248 (2%)
Query: 239 KLYKKHDKFTELEQIKTELKSLEEKLDLNSSSDEEDTILEDSPNIGDDINLEELSDLNSA 298
KL + E + + + NS + + + +
Sbjct: 38 KLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQL 97
Query: 299 DEESKEDQDKRT------NRKRAPRSHFLIKRNDKDSNLNLYNIESITISRNRLGAQEVR 352
+ D+ T + L+K + + + + +
Sbjct: 98 NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSG 157
Query: 353 KLLSLLNADLLVHLNLSATLETPTTSLLEKPRGETALHVAAARGNLTLVQSLLKQGHPVK 412
+LL+ + + T ++ A ++ + + KQ P++
Sbjct: 158 TFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQ 217
Query: 413 VQDSAGWLPLHEAANHGHTDIVQALVSAGADPND-KVQDSAGWLPLHEAANHGHTDIVQA 471
+ ++ I++ L N QDS G L+ AA G+ IV A
Sbjct: 218 SGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDA 277
Query: 472 LVSAGAEV 479
L+ GA+
Sbjct: 278 LLDYGADP 285
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 59.3 bits (142), Expect = 2e-11
Identities = 22/127 (17%), Positives = 37/127 (29%), Gaps = 34/127 (26%)
Query: 387 TALHVAAARGNLTLVQSLLKQGHPVKVQDSA----------------------------- 417
L ++ G LVQ ++ + + +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62
Query: 418 ----GWLPLHEAANHGHTDIVQALVSAGADPNDK-VQDSAGWLPLHEAANHGHTDIVQAL 472
GW PLH AA+ + + + LV +GA D E G+T Q L
Sbjct: 63 ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122
Query: 473 VSAGAEV 479
++
Sbjct: 123 YGVQEKM 129
Score = 33.9 bits (76), Expect = 0.013
Identities = 6/25 (24%), Positives = 13/25 (52%)
Query: 456 PLHEAANHGHTDIVQALVSAGAEVS 480
L +++ G D+VQ ++ + S
Sbjct: 4 LLLDSSLEGEFDLVQRIIYEVDDPS 28
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 62.0 bits (149), Expect = 2e-11
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 419 WLPLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAANHGHTDIVQALVSAGA 477
PLH A +++ L+ AGADP + G PL A + + + L + GA
Sbjct: 193 RTPLHLAVEAQAASVLELLLKAGADPT--ARMYGGRTPLGSALLRPNPILARLLRAHGA 249
Score = 62.0 bits (149), Expect = 2e-11
Identities = 24/96 (25%), Positives = 35/96 (36%), Gaps = 5/96 (5%)
Query: 385 GETALHVAAARGNLTLVQSLLKQG---HPVKVQDSAGWLPLHEAANHGHTDIVQALVSAG 441
G+TALH+A + + LL + +Q+ G LH AA G V+ L +
Sbjct: 9 GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYA-- 66
Query: 442 ADPNDKVQDSAGWLPLHEAANHGHTDIVQALVSAGA 477
A V + G LH A L+
Sbjct: 67 AGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRP 102
Score = 59.7 bits (143), Expect = 1e-10
Identities = 15/52 (28%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Query: 415 DSAGWLPLHEAANHGHTDIVQALVSAGADPND-KVQDSAGWLPLHEAANHGH 465
G LH A H H + L+ A +Q+ G LH AA G
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGE 57
Score = 55.5 bits (132), Expect = 3e-09
Identities = 15/61 (24%), Positives = 26/61 (42%)
Query: 386 ETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADPN 445
T LH+A ++++ LLK G + G PL A + + + L + GA
Sbjct: 193 RTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAPEP 252
Query: 446 D 446
+
Sbjct: 253 E 253
Score = 45.5 bits (106), Expect = 5e-06
Identities = 20/107 (18%), Positives = 34/107 (31%), Gaps = 12/107 (11%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADP 444
G+TALH+AA G + V+ L G V V + G LH A L+
Sbjct: 45 GQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSH 104
Query: 445 N------------DKVQDSAGWLPLHEAANHGHTDIVQALVSAGAEV 479
D D++ ++ + + ++
Sbjct: 105 PRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQL 151
Score = 38.9 bits (89), Expect = 8e-04
Identities = 8/30 (26%), Positives = 10/30 (33%)
Query: 450 DSAGWLPLHEAANHGHTDIVQALVSAGAEV 479
G LH A H H + L+ A
Sbjct: 6 TEDGDTALHLAVIHQHEPFLDFLLGFSAGH 35
Score = 33.5 bits (75), Expect = 0.042
Identities = 10/26 (38%), Positives = 11/26 (42%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHP 410
G T L A R N L + L G P
Sbjct: 225 GRTPLGSALLRPNPILARLLRAHGAP 250
Score = 32.4 bits (72), Expect = 0.099
Identities = 28/123 (22%), Positives = 43/123 (34%), Gaps = 1/123 (0%)
Query: 357 LLNADLLVHLNLSATLETPTTSLLEKPRGETALHVAAARGNLTLVQSLLKQGHPVKVQDS 416
LL + S T T + A + ++ ++
Sbjct: 97 LLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY 156
Query: 417 AGWLPLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAANHGHTDIVQALVSAG 476
G PLH A H ++V+ L AGAD N G PLH A +++ L+ AG
Sbjct: 157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTC-GRTPLHLAVEAQAASVLELLLKAG 215
Query: 477 AEV 479
A+
Sbjct: 216 ADP 218
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 58.1 bits (139), Expect = 9e-11
Identities = 18/131 (13%), Positives = 32/131 (24%), Gaps = 40/131 (30%)
Query: 387 TALHVAAARGNLTLVQSLLKQGH------PVKVQDSAGWLPLHEAA---NHGHTDIVQAL 437
+L A ++ + G P+ LH A + IV L
Sbjct: 8 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67
Query: 438 VSAGADPNDK-------------------------------VQDSAGWLPLHEAANHGHT 466
V + + + + + +G PL A H
Sbjct: 68 VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 127
Query: 467 DIVQALVSAGA 477
+ L A +
Sbjct: 128 HCEELLTQALS 138
Score = 43.0 bits (100), Expect = 1e-05
Identities = 13/66 (19%), Positives = 19/66 (28%), Gaps = 7/66 (10%)
Query: 421 PLHEAANHGHTDIVQALVSAGADPNDKV----QDSAGWLPLHEAA---NHGHTDIVQALV 473
L EA + + G D +K+ LH A + IV LV
Sbjct: 9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLV 68
Query: 474 SAGAEV 479
+
Sbjct: 69 QNSGNL 74
Score = 40.0 bits (92), Expect = 2e-04
Identities = 7/41 (17%), Positives = 15/41 (36%)
Query: 407 QGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADPNDK 447
+++ + +G PL A H + L A + +
Sbjct: 103 GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNS 143
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 58.3 bits (139), Expect = 2e-10
Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 7/95 (7%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHP-VKVQDSAGWLPLHEAANHGHTDIVQALVSA-GA 442
+ LH AA+ G+L L++ L G V QD GW PL A GH D LV GA
Sbjct: 138 NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGA 197
Query: 443 DPNDKVQDSAGWLPLHEAANHGHTDIVQALVSAGA 477
+ + + D+ G A N + + ++
Sbjct: 198 EYD--LVDNKGAKAEDVALNE---QVKKFFLNNVV 227
Score = 55.6 bits (132), Expect = 2e-09
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 421 PLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAANHGHTDIVQALVSAG 476
PLH+A VQ L+ + + +D G +PLH + + +I L+S
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQ-KDQDGRIPLHWSVSFQAHEITSFLLSKM 57
Score = 54.1 bits (128), Expect = 6e-09
Identities = 17/80 (21%), Positives = 26/80 (32%), Gaps = 1/80 (1%)
Query: 387 TALHVAAARGNLTLVQSLLK-QGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADPN 445
LH A VQ LL + + +D G +PLH + + +I L+S + N
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61
Query: 446 DKVQDSAGWLPLHEAANHGH 465
A
Sbjct: 62 LDDYPDDSGWTPFHIACSVG 81
Score = 45.2 bits (105), Expect = 5e-06
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Query: 385 GETALHVAAARGNLTLVQSLL-KQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGAD 443
G T L A A G+ L+ K G + D+ G A N + + ++ D
Sbjct: 172 GWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLNNVVD 228
Score = 33.6 bits (75), Expect = 0.032
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 456 PLHEAANHGHTDIVQALVSAGA 477
PLH+A VQ L+ +
Sbjct: 3 PLHQACMENEFFKVQELLHSKP 24
Score = 26.3 bits (56), Expect = 7.9
Identities = 7/46 (15%), Positives = 12/46 (26%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGH 430
G LH + + + LL + V + D
Sbjct: 34 GRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS 79
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 56.8 bits (135), Expect = 7e-10
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 388 ALHVAAARGNLTLVQSLLKQG-HPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADPND 446
LH+A+ G L +V+ L+ G + G LH A + + D+V L+ GAD N
Sbjct: 114 CLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN- 172
Query: 447 KVQDSAGWLPLHEAANHGHTDIVQALVSAGAE 478
G+ P T I Q L E
Sbjct: 173 -RVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203
Score = 56.4 bits (134), Expect = 9e-10
Identities = 21/67 (31%), Positives = 26/67 (38%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADP 444
G TALH+A N LV LLK G V G+ P T I Q L +
Sbjct: 145 GRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 204
Query: 445 NDKVQDS 451
+ +S
Sbjct: 205 LQMLPES 211
Score = 46.4 bits (108), Expect = 2e-06
Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 6/52 (11%)
Query: 418 GWLPLHEAANHGHTD----IVQALVSAGADPNDKVQDSAGWLPLHEAANHGH 465
G LH A H +++ + A N Q++ PLH A
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLN--FQNNLQQTPLHLAVITNQ 51
Score = 45.3 bits (105), Expect = 5e-06
Identities = 9/50 (18%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 385 GETALHVAAARGNLT----LVQSLLKQGHPVKVQDSAGWLPLHEAANHGH 430
G++ LH+A +++ + + Q++ PLH A
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQ 51
Score = 33.3 bits (74), Expect = 0.046
Identities = 6/31 (19%), Positives = 11/31 (35%), Gaps = 4/31 (12%)
Query: 453 GWLPLHEAANHGHTD----IVQALVSAGAEV 479
G LH A H +++ + A +
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFL 32
Score = 32.6 bits (72), Expect = 0.076
Identities = 4/25 (16%), Positives = 10/25 (40%)
Query: 384 RGETALHVAAARGNLTLVQSLLKQG 408
+G + + R + + Q L +
Sbjct: 177 QGYSPYQLTWGRPSTRIQQQLGQLT 201
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 48.4 bits (113), Expect = 1e-07
Identities = 24/122 (19%), Positives = 36/122 (29%), Gaps = 31/122 (25%)
Query: 385 GETALHVAAARGNLTLVQSLLKQG-------------------------------HPVKV 413
L AAARG + V++LL+ G
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62
Query: 414 QDSAGWLPLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAANHGHTDIVQALV 473
L + +V A V+D+ G LP+ A GH D+ + L
Sbjct: 63 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122
Query: 474 SA 475
+A
Sbjct: 123 AA 124
Score = 34.5 bits (77), Expect = 0.008
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 456 PLHEAANHGHTDIVQALVSAGA 477
L AA G + V+AL+ AGA
Sbjct: 6 WLATAAARGRVEEVRALLEAGA 27
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 290
Score = 50.0 bits (118), Expect = 2e-07
Identities = 38/257 (14%), Positives = 74/257 (28%), Gaps = 26/257 (10%)
Query: 34 KDLASCYISLAQTYKDNKQYNLAVDYFNKELRLHARNF--PEAVKTLGEIGDLYELQEKS 91
++ A + A Y+ K+ NLA D F K + EA T E ++ S
Sbjct: 34 EEAADLCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNS 93
Query: 92 FEIVQSTHEKALDLARQNKDDKLIRTVMRSIKKLYKKHDNLDSACSELHTVLSSDLCKDL 151
V S + + + + L + A
Sbjct: 94 VNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQS 153
Query: 152 AS----CYISLAQTYKDNKQYNLAVDYFNKELRLHARNF---PEAVKTLGEIGDLYELQE 204
+ C+I A + QY A D ++K ++ N + G
Sbjct: 154 VALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAAT 213
Query: 205 KPFELVVSTHEKALDLARQNKDDKLIRTVMRSMKKLY-----------KKHDKFTELEQI 253
T ++ D + + + + K+ D F L++
Sbjct: 214 DAVA-AARTLQEGQSEDPNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKW 272
Query: 254 KTEL-----KSLEEKLD 265
K + +S++++ D
Sbjct: 273 KITILNKIKESIQQQED 289
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 47.5 bits (111), Expect = 4e-07
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Query: 407 QGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAANHGHT 466
G V +D LH A H H ++V+ L+ GAD + Q + ++G+
Sbjct: 89 HGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH--TQSKFCKTAFDISIDNGNE 146
Query: 467 DIVQAL 472
D+ + L
Sbjct: 147 DLAEIL 152
Score = 42.2 bits (97), Expect = 3e-05
Identities = 14/53 (26%), Positives = 24/53 (45%)
Query: 385 GETALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGHTDIVQAL 437
TALH A + +V+ L+K G V Q + ++G+ D+ + L
Sbjct: 100 KMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 41.8 bits (96), Expect = 4e-05
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 421 PLHEAANHGHTDIVQALVSAGADPN 445
L EAA G D V+ L++ GA
Sbjct: 5 KLLEAARAGQDDEVRILMANGAPFT 29
Score = 39.1 bits (89), Expect = 3e-04
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 456 PLHEAANHGHTDIVQALVSAGAEV 479
L EAA G D V+ L++ GA
Sbjct: 5 KLLEAARAGQDDEVRILMANGAPF 28
Score = 33.7 bits (75), Expect = 0.018
Identities = 8/25 (32%), Positives = 10/25 (40%)
Query: 387 TALHVAAARGNLTLVQSLLKQGHPV 411
L AA G V+ L+ G P
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPF 28
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 46.7 bits (109), Expect = 8e-07
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 407 QGHPVKVQDSAGWLPLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAANHGHT 466
G V V D G LP+H A GHT +V ++A +D + +D+ G PL A G
Sbjct: 90 HGADVNVPDGTGALPIHLAVQEGHTAVVSF-LAAESDLH--RRDARGLTPLELALQRGAQ 146
Query: 467 DIVQALVS 474
D+V L
Sbjct: 147 DLVDILQG 154
Score = 36.3 bits (82), Expect = 0.003
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Query: 384 RGETALHVAAARGNLTLVQSLL-KQGHPVKVQDSAGWLPLHEAANHGH 430
R L AAARG++ V+ LL ++ + G L
Sbjct: 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGST 48
Score = 33.6 bits (75), Expect = 0.019
Identities = 9/46 (19%), Positives = 13/46 (28%), Gaps = 3/46 (6%)
Query: 421 PLHEAANHGHTDIVQALV-SAGADPNDKVQDSAGWLPLHEAANHGH 465
L AA G V+ L+ P+ + G L
Sbjct: 5 RLSGAAARGDVQEVRRLLHRELVHPDAL--NRFGKTALQVMMFGST 48
Score = 30.9 bits (68), Expect = 0.18
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 384 RGETALHVAAARGNLTLVQSLL 405
RG T L +A RG LV L
Sbjct: 132 RGLTPLELALQRGAQDLVDILQ 153
Score = 29.0 bits (63), Expect = 0.87
Identities = 6/21 (28%), Positives = 8/21 (38%)
Query: 456 PLHEAANHGHTDIVQALVSAG 476
L AA G V+ L+
Sbjct: 5 RLSGAAARGDVQEVRRLLHRE 25
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 44.9 bits (104), Expect = 4e-06
Identities = 9/45 (20%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Query: 421 PLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAANHGH 465
L AA G + + +L+ + N Q+ G L
Sbjct: 4 ELASAAARGDLEQLTSLLQNNVNVN--AQNGFGRTALQVMKLGNP 46
Score = 43.3 bits (100), Expect = 1e-05
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 409 HPVKVQDSAGWLPLHEAANHGHTDIVQALVSAG 441
V ++ G A +G ++V + + G
Sbjct: 124 SNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 43.0 bits (99), Expect = 1e-05
Identities = 14/44 (31%), Positives = 18/44 (40%)
Query: 387 TALHVAAARGNLTLVQSLLKQGHPVKVQDSAGWLPLHEAANHGH 430
L AAARG+L + SLL+ V Q+ G L
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNP 46
Score = 42.2 bits (97), Expect = 3e-05
Identities = 5/29 (17%), Positives = 12/29 (41%)
Query: 448 VQDSAGWLPLHEAANHGHTDIVQALVSAG 476
++ G A +G ++V + + G
Sbjct: 128 HRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 39.1 bits (89), Expect = 3e-04
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 456 PLHEAANHGHTDIVQALVSAGAEV 479
L AA G + + +L+ V
Sbjct: 4 ELASAAARGDLEQLTSLLQNNVNV 27
Score = 36.0 bits (81), Expect = 0.004
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 384 RGETALHVAAARGNLTLVQSLLKQG 408
+G+TA +A G +V + G
Sbjct: 132 KGDTACDLARLYGRNEVVSLMQANG 156
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId:
9606]}
Length = 497
Score = 40.2 bits (93), Expect = 5e-04
Identities = 23/192 (11%), Positives = 43/192 (22%), Gaps = 26/192 (13%)
Query: 35 DLASCYISLAQTYKDNKQYNLAVDYFNKELRLHARNFPEAVKTLGEIGDL--YELQEKSF 92
D+ + A+ + + D + K L + K ++ +
Sbjct: 18 DMTDSKLGPAEVWTSRQALQ---DLYQKMLVTDL-EYALDKKVEQDLWNHAFKNQI---- 69
Query: 93 EIVQSTHEKALDLARQNKDDKLIRTVMRSIKKLYKKHDNLDSACSELHTVLSSDLCKDLA 152
A+ + L EL TV + DL
Sbjct: 70 -------TTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTVFNVDL--PCR 120
Query: 153 SCYISLAQTYKDNKQYNLAVDYFNKELRLHARNFPEAVKTLGEIGDLYELQEKPFELVVS 212
L + V + L +GD+ + + S
Sbjct: 121 VKSSQLGIISNKQTHTSAIVKPQSSSCS------YICQHCLVHLGDIARYRNQ-TSQAES 173
Query: 213 THEKALDLARQN 224
+ A L N
Sbjct: 174 YYRHAAQLVPSN 185
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId:
562]}
Length = 259
Score = 37.5 bits (85), Expect = 0.002
Identities = 19/171 (11%), Positives = 52/171 (30%), Gaps = 11/171 (6%)
Query: 31 DLCKDLASCYISLAQTYKDNKQYNLAVDYFNKELRLHARNFPEAVKTLGEIGDLYELQEK 90
+L +++ + LA D + + ++ + + +++
Sbjct: 99 ELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDPFRSLWL--YLAEQKLDEKQ 156
Query: 91 SFEIVQSTHEKALDLARQNKDDKLIRTVMRSIKKLYKKHDNLDSACSELHTVLSSDLCKD 150
+ E+++ EK+ + + + + + + L +
Sbjct: 157 AKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMERLKADATDN---------TSLAEH 207
Query: 151 LASCYISLAQTYKDNKQYNLAVDYFNKELRLHARNFPEAVKTLGEIGDLYE 201
L+ L + Y + A F + + NF E L E+ L +
Sbjct: 208 LSETNFYLGKYYLSLGDLDSATALFKLAVANNVHNFVEHRYALLELSLLGQ 258
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2,
p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Length = 192
Score = 35.6 bits (81), Expect = 0.006
Identities = 18/148 (12%), Positives = 45/148 (30%), Gaps = 16/148 (10%)
Query: 43 LAQTYKDNKQYNLAVDYFNKELRLHARNFPEAVKTLGEIGDLYELQEKSFEIVQSTHEKA 102
D K + A+D F+ H+ + IG +Y + + + ++
Sbjct: 11 EGVLAADKKDWKGALDAFSAVQDPHS-------RICFNIGCMYTILKN-MTEAEKAFTRS 62
Query: 103 LDLARQNKDDKLIRTVM--------RSIKKLYKKHDNLDSACSELHTVLSSDLCKDLASC 154
++ + R ++ +IK L + L + +L
Sbjct: 63 INRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEV 122
Query: 155 YISLAQTYKDNKQYNLAVDYFNKELRLH 182
++A Y +++ A + +
Sbjct: 123 LYNIAFMYAKKEEWKKAEEQLALATSMK 150
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 31.0 bits (68), Expect = 0.096
Identities = 5/20 (25%), Positives = 8/20 (40%)
Query: 421 PLHEAANHGHTDIVQALVSA 440
A +G D V+ V+
Sbjct: 5 EFMWALKNGDLDEVKDYVAK 24
Score = 31.0 bits (68), Expect = 0.096
Identities = 5/20 (25%), Positives = 8/20 (40%)
Query: 456 PLHEAANHGHTDIVQALVSA 475
A +G D V+ V+
Sbjct: 5 EFMWALKNGDLDEVKDYVAK 24
Score = 31.0 bits (68), Expect = 0.12
Identities = 17/119 (14%), Positives = 29/119 (24%), Gaps = 35/119 (29%)
Query: 385 GETALHVAAARGNLTLVQSLLKQ---------------------------------GHPV 411
+ A G+L V+ + + G +
Sbjct: 2 CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI 61
Query: 412 KVQDSAGWLPLHEAANHGHTDIVQALVSAGADPNDKVQDSAGWLPLHEAANHGHTDIVQ 470
D PL A GH V+ + + V+ G L N ++Q
Sbjct: 62 NAPDKHHITPLLSAVYEGHVSCVK--LLLSKGADKTVKGPDGLTALEATDNQAIKALLQ 118
>d1rq0a_ e.38.1.1 (A:) Peptide chain release factor 1, RF1
{Thermotoga maritima [TaxId: 2336]}
Length = 333
Score = 30.5 bits (68), Expect = 0.41
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 237 MKKLYKKHDKFTELEQIKTELKSLEEKLDLNSSSDEEDTILED 279
MK ++ K E+E I +K +E ++L E + +E
Sbjct: 22 MKNYGMEYAKIEEIENITNRIKETQEFIELLREEGENELEIEK 64
>d2b3tb1 e.38.1.1 (B:7-354) Peptide chain release factor 1, RF1
{Escherichia coli [TaxId: 562]}
Length = 344
Score = 28.5 bits (63), Expect = 1.6
Identities = 9/48 (18%), Positives = 22/48 (45%)
Query: 225 KDDKLIRTVMRSMKKLYKKHDKFTELEQIKTELKSLEEKLDLNSSSDE 272
D + R + R +L FT+ +Q++ ++++ + LD +
Sbjct: 20 ADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMMLDDPEMREM 67
>d2r2za1 d.145.1.4 (A:5-88) Putative hemolysin EF0700 {Enterococcus
faecalis [TaxId: 1351]}
Length = 84
Score = 26.2 bits (58), Expect = 2.5
Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 7/58 (12%)
Query: 240 LYKKHDKFTELEQIKTELKSLEEKLDLNSSSDEEDTI-------LEDSPNIGDDINLE 290
LY + L Q + + E + + + DT+ L P+ G+ + E
Sbjct: 2 LYTQVADNEYLVQGRMLIDEFNEVFETDLHMSDVDTMAGYLITALGTIPDEGEKPSFE 59
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 460
Score = 28.0 bits (60), Expect = 2.8
Identities = 9/35 (25%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Query: 335 NIESITISRNRLGAQEVRKLLSLLNADLLVHLNLS 369
+I+S+ I L +LL LL + L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQ--CQVVRLD 35
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus
thermophilus, strain hb27 [TaxId: 274]}
Length = 110
Score = 26.0 bits (57), Expect = 4.0
Identities = 21/110 (19%), Positives = 32/110 (29%), Gaps = 7/110 (6%)
Query: 177 KELRLHARNFPEAVKTLGEIGDLYELQEKPFELVVSTHEKALDLARQNKDDKLIRTVMRS 236
K LR F A++ G DL L E+ +N+ K +
Sbjct: 5 KRLRQEPEVFHRAIREKGVALDLEALLALDREVQELKKRLQEVQTERNQVAKRVP----- 59
Query: 237 MKKLYKKHDKFTELEQIKTELKSLEEKLDLNSSSDEEDTILEDSPNIGDD 286
+K + + E K LEE L + +L P
Sbjct: 60 KAPPEEKEALIARGKALGEEAKRLEEA--LREKEARLEALLLQVPLPPWP 107
>d1q08a_ a.6.1.3 (A:) Transcriptional regulator ZntR {Escherichia
coli [TaxId: 562]}
Length = 94
Score = 25.6 bits (56), Expect = 5.4
Identities = 10/62 (16%), Positives = 24/62 (38%)
Query: 218 LDLARQNKDDKLIRTVMRSMKKLYKKHDKFTELEQIKTELKSLEEKLDLNSSSDEEDTIL 277
L + + + ++L + + EL+ ++ L+ L + + S +IL
Sbjct: 26 LSIRIDPEHHTCQESKGIVQERLQEVEARIAELQSMQRSLQRLNDACCGTAHSSVYCSIL 85
Query: 278 ED 279
E
Sbjct: 86 EA 87
>d1ea0a2 c.1.4.1 (A:423-1193) Alpha subunit of glutamate synthase,
central and FMN domains {Azospirillum brasilense [TaxId:
192]}
Length = 771
Score = 27.2 bits (60), Expect = 6.3
Identities = 12/72 (16%), Positives = 17/72 (23%)
Query: 58 DYFNKELRLHARNFPEAVKTLGEIGDLYELQEKSFEIVQSTHEKALDLARQNKDDKLIRT 117
K L HA + E V L G + + L A N +
Sbjct: 331 GIQKKVLEQHATAYNEEVVALPVGGFYRFRKSGDRHGWEGGVIHTLQQAVTNDSYTTFKK 390
Query: 118 VMRSIKKLYKKH 129
+ K
Sbjct: 391 YSEQVNKRPPMQ 402
Score = 26.4 bits (58), Expect = 9.2
Identities = 12/72 (16%), Positives = 16/72 (22%)
Query: 173 DYFNKELRLHARNFPEAVKTLGEIGDLYELQEKPFELVVSTHEKALDLARQNKDDKLIRT 232
K L HA + E V L G + L A N +
Sbjct: 331 GIQKKVLEQHATAYNEEVVALPVGGFYRFRKSGDRHGWEGGVIHTLQQAVTNDSYTTFKK 390
Query: 233 VMRSMKKLYKKH 244
+ K
Sbjct: 391 YSEQVNKRPPMQ 402
>d2fcwa1 a.13.1.1 (A:216-320) alpha-2-Macroglobulin receptor
associated protein (RAP) {Human (Homo sapiens) [TaxId:
9606]}
Length = 105
Score = 25.6 bits (56), Expect = 6.3
Identities = 12/65 (18%), Positives = 24/65 (36%)
Query: 249 ELEQIKTELKSLEEKLDLNSSSDEEDTILEDSPNIGDDINLEELSDLNSADEESKEDQDK 308
ELE + ELK E K++ ++ ++ I + + + E + E + K
Sbjct: 24 ELEAFREELKHFEAKIEKHNHYQKQLEIAHEKLRHAESVGDGERVSRSREKHALLEGRTK 83
Query: 309 RTNRK 313
Sbjct: 84 ELGYT 88
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.313 0.130 0.358
Gapped
Lambda K H
0.267 0.0713 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,588,067
Number of extensions: 72350
Number of successful extensions: 401
Number of sequences better than 10.0: 1
Number of HSP's gapped: 329
Number of HSP's successfully gapped: 139
Length of query: 480
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 391
Effective length of database: 1,185,626
Effective search space: 463579766
Effective search space used: 463579766
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.0 bits)