Query psy8758
Match_columns 198
No_of_seqs 386 out of 1018
Neff 11.7
Searched_HMMs 29240
Date Fri Aug 16 18:30:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8758.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8758hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 1E-39 3.4E-44 235.1 26.2 188 2-194 128-333 (344)
2 4g56_B MGC81050 protein; prote 100.0 3.4E-38 1.2E-42 228.4 24.6 187 2-193 140-344 (357)
3 2ynn_A Coatomer subunit beta'; 100.0 2.7E-37 9.3E-42 219.1 26.0 192 2-196 14-221 (304)
4 1got_B GT-beta; complex (GTP-b 100.0 5.3E-37 1.8E-41 220.8 27.6 190 2-196 56-261 (340)
5 3ow8_A WD repeat-containing pr 100.0 4.5E-37 1.5E-41 219.5 25.7 190 2-196 81-283 (321)
6 1nr0_A Actin interacting prote 100.0 2.8E-37 9.6E-42 237.5 26.4 194 2-196 60-274 (611)
7 4gqb_B Methylosome protein 50; 100.0 4.5E-37 1.5E-41 221.3 25.6 191 2-196 83-293 (344)
8 2ynn_A Coatomer subunit beta'; 100.0 9E-37 3.1E-41 216.4 26.3 191 2-196 56-263 (304)
9 3ow8_A WD repeat-containing pr 100.0 3.3E-36 1.1E-40 215.0 26.0 184 3-191 124-320 (321)
10 4ery_A WD repeat-containing pr 100.0 7.8E-36 2.7E-40 212.1 27.5 191 2-196 24-227 (312)
11 1vyh_C Platelet-activating fac 100.0 2.9E-36 1E-40 221.9 25.7 190 2-196 151-373 (410)
12 3iz6_a 40S ribosomal protein R 100.0 2.3E-36 7.9E-41 220.5 24.2 190 2-196 67-284 (380)
13 3frx_A Guanine nucleotide-bind 100.0 7.1E-36 2.4E-40 213.2 26.2 188 2-193 66-318 (319)
14 1vyh_C Platelet-activating fac 100.0 6.8E-36 2.3E-40 220.0 26.3 190 2-196 109-331 (410)
15 2pbi_B Guanine nucleotide-bind 100.0 1.7E-35 5.7E-40 214.0 27.0 189 2-195 65-274 (354)
16 4e54_B DNA damage-binding prot 100.0 1E-36 3.5E-41 225.9 20.9 191 2-195 120-330 (435)
17 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.8E-35 6.2E-40 213.2 25.2 188 3-191 18-224 (345)
18 4h5i_A Guanine nucleotide-exch 100.0 2.7E-35 9.1E-40 213.8 25.9 185 3-192 135-343 (365)
19 4aow_A Guanine nucleotide-bind 100.0 6.1E-35 2.1E-39 209.2 26.5 192 2-195 39-340 (340)
20 1erj_A Transcriptional repress 100.0 4.4E-35 1.5E-39 214.5 25.6 189 3-196 125-345 (393)
21 2pm7_B Protein transport prote 100.0 1.5E-34 5E-39 204.5 26.0 188 2-193 10-239 (297)
22 3frx_A Guanine nucleotide-bind 100.0 2.1E-34 7.2E-39 205.6 26.6 191 2-196 18-231 (319)
23 1got_B GT-beta; complex (GTP-b 100.0 4.2E-34 1.4E-38 205.6 26.2 192 2-196 98-305 (340)
24 3gre_A Serine/threonine-protei 100.0 4.5E-35 1.5E-39 216.9 20.9 193 2-196 64-296 (437)
25 2pm7_B Protein transport prote 100.0 5.1E-34 1.7E-38 201.7 25.3 189 2-191 54-284 (297)
26 2pbi_B Guanine nucleotide-bind 100.0 6.8E-34 2.3E-38 205.6 26.5 183 2-189 155-354 (354)
27 3bg1_A Protein SEC13 homolog; 100.0 2.8E-34 9.4E-39 204.7 21.7 189 2-191 58-292 (316)
28 3f3f_A Nucleoporin SEH1; struc 100.0 1.6E-33 5.6E-38 201.8 25.8 193 2-196 12-341 (351)
29 4g56_B MGC81050 protein; prote 100.0 3.5E-34 1.2E-38 207.3 22.4 191 2-196 95-305 (357)
30 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-33 4.9E-38 203.3 25.1 191 2-193 62-284 (345)
31 3iz6_a 40S ribosomal protein R 100.0 5.5E-34 1.9E-38 207.9 22.2 194 2-196 158-379 (380)
32 3ei3_B DNA damage-binding prot 100.0 1.9E-33 6.5E-38 204.9 25.0 190 2-196 74-286 (383)
33 2hes_X YDR267CP; beta-propelle 100.0 1.1E-33 3.7E-38 202.7 23.1 188 2-193 15-231 (330)
34 2xzm_R RACK1; ribosome, transl 100.0 5E-33 1.7E-37 200.3 26.7 186 2-195 77-288 (343)
35 2hes_X YDR267CP; beta-propelle 100.0 1.8E-33 6.2E-38 201.6 22.8 191 2-194 59-282 (330)
36 3dwl_C Actin-related protein 2 100.0 1.2E-34 4E-39 210.8 16.4 189 2-195 12-239 (377)
37 3bg1_A Protein SEC13 homolog; 100.0 7.2E-34 2.4E-38 202.6 19.6 189 2-192 14-247 (316)
38 4ggc_A P55CDC, cell division c 100.0 1E-32 3.4E-37 196.1 25.3 187 4-194 28-317 (318)
39 2xzm_R RACK1; ribosome, transl 100.0 5.9E-32 2E-36 194.6 28.3 186 2-192 22-244 (343)
40 1erj_A Transcriptional repress 100.0 1.6E-32 5.3E-37 201.0 25.4 188 2-194 166-391 (393)
41 1nr0_A Actin interacting prote 100.0 7.3E-33 2.5E-37 213.0 24.6 189 2-195 104-358 (611)
42 4a11_B DNA excision repair pro 100.0 1.8E-32 6.1E-37 200.6 25.4 193 2-196 44-280 (408)
43 3k26_A Polycomb protein EED; W 100.0 2.3E-33 7.7E-38 202.7 20.0 189 2-192 116-366 (366)
44 2ymu_A WD-40 repeat protein; u 100.0 1.4E-32 4.7E-37 209.8 24.7 180 2-189 386-577 (577)
45 3vl1_A 26S proteasome regulato 100.0 2.6E-32 8.8E-37 201.0 24.9 187 2-193 140-366 (420)
46 1k8k_C P40, ARP2/3 complex 41 100.0 5.2E-32 1.8E-36 196.2 24.6 191 2-196 9-237 (372)
47 3dw8_B Serine/threonine-protei 100.0 2.6E-32 8.9E-37 202.3 23.1 189 2-196 29-320 (447)
48 4ery_A WD repeat-containing pr 100.0 1.9E-31 6.3E-36 189.6 26.6 190 2-196 66-272 (312)
49 2j04_B YDR362CP, TAU91; beta p 100.0 7.1E-33 2.4E-37 208.9 20.2 188 2-193 208-429 (524)
50 3zwl_B Eukaryotic translation 100.0 1.6E-31 5.3E-36 193.2 26.2 191 2-196 33-253 (369)
51 3vu4_A KMHSV2; beta-propeller 100.0 8.5E-32 2.9E-36 194.7 24.8 188 2-194 20-273 (355)
52 2pm9_A Protein WEB1, protein t 100.0 9E-33 3.1E-37 203.0 19.9 193 2-195 114-340 (416)
53 3dm0_A Maltose-binding peripla 100.0 4.5E-32 1.5E-36 211.3 24.7 188 2-196 431-636 (694)
54 1gxr_A ESG1, transducin-like e 100.0 2E-31 6.9E-36 190.6 25.8 189 2-195 52-258 (337)
55 3dm0_A Maltose-binding peripla 100.0 7.9E-32 2.7E-36 209.9 25.6 192 2-196 383-596 (694)
56 4e54_B DNA damage-binding prot 100.0 1.5E-32 5.1E-37 203.5 20.3 193 2-196 165-434 (435)
57 1sq9_A Antiviral protein SKI8; 100.0 3.8E-32 1.3E-36 198.6 21.8 190 2-194 122-397 (397)
58 4gga_A P55CDC, cell division c 100.0 5.8E-31 2E-35 194.2 27.7 190 2-195 148-398 (420)
59 3vl1_A 26S proteasome regulato 100.0 5.3E-32 1.8E-36 199.3 22.0 188 4-195 100-325 (420)
60 3jrp_A Fusion protein of prote 100.0 1.6E-31 5.6E-36 193.8 23.8 191 2-193 56-288 (379)
61 2aq5_A Coronin-1A; WD40 repeat 100.0 1.5E-31 5.1E-36 196.2 23.6 191 2-195 82-302 (402)
62 1gxr_A ESG1, transducin-like e 100.0 8.3E-31 2.8E-35 187.4 26.9 190 2-196 98-300 (337)
63 3jrp_A Fusion protein of prote 100.0 4.3E-31 1.5E-35 191.6 25.6 190 2-194 12-242 (379)
64 2pm9_A Protein WEB1, protein t 100.0 6.9E-32 2.3E-36 198.3 21.6 190 2-196 68-298 (416)
65 1k8k_C P40, ARP2/3 complex 41 100.0 2.5E-31 8.5E-36 192.6 24.1 188 2-192 53-274 (372)
66 1r5m_A SIR4-interacting protei 100.0 3.7E-31 1.3E-35 194.5 25.2 187 3-196 110-323 (425)
67 1sq9_A Antiviral protein SKI8; 100.0 1.2E-31 4.2E-36 196.0 22.3 191 2-196 63-326 (397)
68 2ymu_A WD-40 repeat protein; u 100.0 5.7E-31 1.9E-35 200.9 25.5 185 2-195 345-541 (577)
69 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.3E-31 1.8E-35 196.0 24.5 192 2-196 5-275 (450)
70 3v7d_B Cell division control p 100.0 1.8E-30 6E-35 193.6 26.4 186 2-195 163-384 (464)
71 3dwl_C Actin-related protein 2 100.0 5.6E-32 1.9E-36 196.7 17.8 186 2-191 56-280 (377)
72 2xyi_A Probable histone-bindin 100.0 1.2E-30 4E-35 193.2 25.0 190 2-192 182-410 (430)
73 4aez_A CDC20, WD repeat-contai 100.0 1.8E-30 6.3E-35 190.5 25.6 192 2-196 135-384 (401)
74 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.1E-30 1.7E-34 190.7 27.9 188 3-193 104-342 (450)
75 2oaj_A Protein SNI1; WD40 repe 100.0 2.6E-31 8.8E-36 211.7 21.9 188 2-196 18-246 (902)
76 4a11_B DNA excision repair pro 100.0 6.1E-30 2.1E-34 187.2 27.2 190 2-196 100-369 (408)
77 3mmy_A MRNA export factor; mRN 100.0 6.2E-31 2.1E-35 190.0 21.5 184 2-190 87-344 (368)
78 2j04_B YDR362CP, TAU91; beta p 100.0 1.5E-31 5E-36 201.7 18.8 192 2-195 134-389 (524)
79 3mkq_A Coatomer beta'-subunit; 100.0 9.7E-31 3.3E-35 206.6 23.8 192 2-196 14-221 (814)
80 2xyi_A Probable histone-bindin 100.0 2.1E-30 7.1E-35 191.8 23.7 188 2-192 129-353 (430)
81 1pgu_A Actin interacting prote 100.0 1.8E-30 6.2E-35 199.1 24.0 188 4-196 67-287 (615)
82 3dw8_B Serine/threonine-protei 100.0 6.9E-31 2.3E-35 194.7 20.5 190 2-196 94-377 (447)
83 3zwl_B Eukaryotic translation 100.0 1.4E-29 4.8E-34 182.9 26.9 189 2-196 75-308 (369)
84 4gq1_A NUP37; propeller, trans 100.0 3.8E-31 1.3E-35 193.7 18.6 186 2-192 137-389 (393)
85 3i2n_A WD repeat-containing pr 100.0 1.7E-30 5.9E-35 187.1 21.4 188 2-194 66-293 (357)
86 3sfz_A APAF-1, apoptotic pepti 100.0 4.2E-30 1.4E-34 210.8 26.2 191 2-196 616-875 (1249)
87 1r5m_A SIR4-interacting protei 100.0 5.6E-30 1.9E-34 188.2 24.1 187 2-191 150-424 (425)
88 3i2n_A WD repeat-containing pr 100.0 8.9E-30 3E-34 183.4 24.4 191 2-196 19-247 (357)
89 3mmy_A MRNA export factor; mRN 100.0 1.1E-29 3.6E-34 183.5 24.8 191 2-196 40-308 (368)
90 4aez_A CDC20, WD repeat-contai 100.0 9.6E-30 3.3E-34 186.7 24.3 188 4-196 96-297 (401)
91 3lrv_A PRE-mRNA-splicing facto 100.0 1.2E-30 4.3E-35 187.7 19.2 178 9-196 44-248 (343)
92 3k26_A Polycomb protein EED; W 100.0 4.6E-31 1.6E-35 190.7 17.0 188 2-196 70-322 (366)
93 3mkq_A Coatomer beta'-subunit; 100.0 6.3E-30 2.2E-34 202.0 24.9 190 2-196 56-263 (814)
94 3ei3_B DNA damage-binding prot 100.0 6.2E-30 2.1E-34 186.4 22.5 184 2-192 164-382 (383)
95 3jro_A Fusion protein of prote 100.0 6.9E-30 2.4E-34 200.6 24.1 189 2-194 10-240 (753)
96 3odt_A Protein DOA1; ubiquitin 100.0 3.2E-29 1.1E-33 177.5 24.9 185 2-196 19-218 (313)
97 3odt_A Protein DOA1; ubiquitin 100.0 1.7E-29 5.7E-34 179.0 23.4 184 2-196 105-300 (313)
98 3jro_A Fusion protein of prote 100.0 3.8E-30 1.3E-34 202.1 21.9 192 2-194 54-287 (753)
99 1yfq_A Cell cycle arrest prote 100.0 8E-30 2.7E-34 182.9 21.8 190 2-196 57-286 (342)
100 3sfz_A APAF-1, apoptotic pepti 100.0 1.7E-30 5.9E-35 213.1 19.3 190 2-196 962-1162(1249)
101 3gre_A Serine/threonine-protei 100.0 7.9E-30 2.7E-34 188.8 20.6 192 2-196 112-363 (437)
102 4gga_A P55CDC, cell division c 100.0 4.4E-29 1.5E-33 184.2 23.9 190 4-196 108-314 (420)
103 2aq5_A Coronin-1A; WD40 repeat 100.0 1.6E-29 5.6E-34 185.4 21.4 190 4-195 37-257 (402)
104 3v7d_B Cell division control p 100.0 6.3E-29 2.1E-33 185.2 24.6 184 4-196 125-345 (464)
105 2w18_A PALB2, fancn, partner a 100.0 3.3E-29 1.1E-33 176.8 20.9 183 2-191 112-356 (356)
106 1pgu_A Actin interacting prote 100.0 4.5E-29 1.5E-33 191.4 21.6 187 2-196 19-242 (615)
107 4h5i_A Guanine nucleotide-exch 100.0 6.5E-29 2.2E-33 180.3 20.4 148 48-196 136-304 (365)
108 1yfq_A Cell cycle arrest prote 100.0 1E-28 3.5E-33 177.1 21.3 188 2-193 12-226 (342)
109 1p22_A F-BOX/WD-repeat protein 100.0 3.3E-28 1.1E-32 180.2 23.4 180 2-194 174-367 (435)
110 3lrv_A PRE-mRNA-splicing facto 100.0 2E-28 6.8E-33 176.2 21.4 186 2-194 77-294 (343)
111 2j04_A TAU60, YPL007P, hypothe 100.0 5.7E-29 1.9E-33 185.8 18.0 184 2-195 16-257 (588)
112 1p22_A F-BOX/WD-repeat protein 100.0 1.7E-27 5.7E-32 176.5 25.1 181 3-196 135-329 (435)
113 2j04_A TAU60, YPL007P, hypothe 100.0 6E-28 2.1E-32 180.3 21.7 180 2-191 86-296 (588)
114 1l0q_A Surface layer protein; 100.0 1E-26 3.5E-31 169.7 25.4 188 2-196 32-237 (391)
115 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.9E-27 1.3E-31 174.9 22.9 177 9-196 125-312 (445)
116 2oaj_A Protein SNI1; WD40 repe 100.0 1.3E-26 4.4E-31 184.9 25.2 182 2-190 59-310 (902)
117 1l0q_A Surface layer protein; 100.0 6E-26 2.1E-30 165.7 26.7 187 3-196 75-279 (391)
118 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.3E-26 1.1E-30 169.9 25.4 182 2-193 240-443 (445)
119 3vu4_A KMHSV2; beta-propeller 100.0 2.3E-26 7.8E-31 166.3 23.1 189 3-195 60-339 (355)
120 4gq1_A NUP37; propeller, trans 100.0 3.3E-27 1.1E-31 172.9 15.2 186 8-196 96-352 (393)
121 2w18_A PALB2, fancn, partner a 100.0 5.5E-27 1.9E-31 165.5 15.4 144 3-147 180-355 (356)
122 3bws_A Protein LP49; two-domai 99.9 2.2E-25 7.6E-30 164.7 23.3 189 2-196 170-394 (433)
123 3bws_A Protein LP49; two-domai 99.9 2.9E-24 9.8E-29 158.7 25.6 184 2-192 212-432 (433)
124 4ggc_A P55CDC, cell division c 99.9 1.4E-24 4.8E-29 154.0 20.5 148 2-151 68-317 (318)
125 4aow_A Guanine nucleotide-bind 99.9 7.1E-24 2.4E-28 151.7 21.6 152 44-196 37-250 (340)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.7E-23 5.8E-28 154.2 23.8 185 2-194 179-389 (415)
127 2oit_A Nucleoporin 214KDA; NH2 99.9 1.4E-24 4.7E-29 160.8 17.3 160 3-193 94-279 (434)
128 2oit_A Nucleoporin 214KDA; NH2 99.9 1.4E-24 4.8E-29 160.7 17.2 168 3-191 38-222 (434)
129 3f3f_A Nucleoporin SEH1; struc 99.9 7.7E-24 2.6E-28 151.5 19.9 150 44-194 10-251 (351)
130 2ojh_A Uncharacterized protein 99.9 1.2E-22 4E-27 142.4 22.5 191 2-195 42-261 (297)
131 3vgz_A Uncharacterized protein 99.9 9.6E-22 3.3E-26 141.4 23.5 190 3-196 42-266 (353)
132 1pby_B Quinohemoprotein amine 99.9 8.8E-22 3E-26 140.6 20.7 183 3-196 83-314 (337)
133 1nir_A Nitrite reductase; hemo 99.9 2.1E-21 7.1E-26 147.4 23.6 183 4-192 181-402 (543)
134 2ecf_A Dipeptidyl peptidase IV 99.9 3.4E-22 1.1E-26 156.8 19.0 189 2-195 37-324 (741)
135 1ri6_A Putative isomerase YBHE 99.9 8.6E-21 2.9E-25 135.8 24.0 190 3-194 85-312 (343)
136 3hfq_A Uncharacterized protein 99.9 1.8E-20 6.1E-25 134.8 25.0 191 3-195 87-322 (347)
137 1ri6_A Putative isomerase YBHE 99.9 3.1E-20 1.1E-24 132.9 25.9 189 2-191 38-261 (343)
138 1nir_A Nitrite reductase; hemo 99.9 7.3E-21 2.5E-25 144.4 22.7 191 3-196 223-462 (543)
139 3o4h_A Acylamino-acid-releasin 99.9 3.1E-21 1.1E-25 147.7 20.0 183 3-195 23-230 (582)
140 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.9E-20 6.3E-25 138.0 23.4 175 13-195 143-347 (415)
141 3u4y_A Uncharacterized protein 99.9 3.4E-20 1.2E-24 132.4 22.8 184 6-194 88-306 (331)
142 1xfd_A DIP, dipeptidyl aminope 99.9 2E-21 6.8E-26 152.0 17.7 188 3-195 18-292 (723)
143 3vgz_A Uncharacterized protein 99.9 5.9E-20 2E-24 132.0 23.7 190 3-196 90-307 (353)
144 3u4y_A Uncharacterized protein 99.9 5.3E-20 1.8E-24 131.4 23.3 187 3-195 42-255 (331)
145 1jmx_B Amine dehydrogenase; ox 99.9 9.2E-20 3.2E-24 130.8 22.3 187 3-196 44-329 (349)
146 2ojh_A Uncharacterized protein 99.9 1.9E-20 6.5E-25 131.1 16.5 178 2-183 85-293 (297)
147 3scy_A Hypothetical bacterial 99.9 1.8E-18 6.1E-23 125.1 26.8 187 3-191 51-290 (361)
148 3hfq_A Uncharacterized protein 99.9 7.5E-19 2.6E-23 126.3 24.3 187 3-191 41-270 (347)
149 1k32_A Tricorn protease; prote 99.9 4.1E-20 1.4E-24 149.9 19.0 185 4-195 247-464 (1045)
150 2z3z_A Dipeptidyl aminopeptida 99.9 2.6E-19 8.8E-24 139.8 22.7 187 4-194 183-437 (706)
151 1xfd_A DIP, dipeptidyl aminope 99.9 1E-19 3.5E-24 142.4 19.4 188 3-194 62-347 (723)
152 3scy_A Hypothetical bacterial 99.8 8.8E-18 3E-22 121.4 25.6 189 4-195 102-342 (361)
153 1pby_B Quinohemoprotein amine 99.8 2.7E-18 9.2E-23 122.5 22.2 174 14-196 2-273 (337)
154 2ecf_A Dipeptidyl peptidase IV 99.8 2.4E-19 8.2E-24 140.6 18.0 182 3-191 110-366 (741)
155 2z3z_A Dipeptidyl aminopeptida 99.8 5.1E-19 1.7E-23 138.2 19.5 181 3-191 83-341 (706)
156 1jmx_B Amine dehydrogenase; ox 99.8 1.7E-18 5.9E-23 124.1 19.5 183 6-196 4-288 (349)
157 2oiz_A Aromatic amine dehydrog 99.8 3.7E-18 1.3E-22 123.6 20.8 187 6-196 54-340 (361)
158 3o4h_A Acylamino-acid-releasin 99.8 2.7E-19 9.4E-24 137.0 15.0 183 3-195 66-277 (582)
159 1z68_A Fibroblast activation p 99.8 2.6E-19 8.8E-24 140.1 13.3 188 5-195 19-294 (719)
160 1k32_A Tricorn protease; prote 99.8 2.4E-18 8.1E-23 139.7 19.0 181 3-192 297-502 (1045)
161 1jof_A Carboxy-CIS,CIS-muconat 99.8 2E-17 7E-22 119.8 21.2 170 3-194 41-228 (365)
162 1z68_A Fibroblast activation p 99.8 7.1E-19 2.4E-23 137.6 14.0 186 3-194 61-348 (719)
163 3pe7_A Oligogalacturonate lyas 99.8 3.7E-18 1.3E-22 124.3 16.4 183 7-195 41-276 (388)
164 1jof_A Carboxy-CIS,CIS-muconat 99.8 3.4E-17 1.2E-21 118.7 19.6 190 4-193 85-342 (365)
165 4a5s_A Dipeptidyl peptidase 4 99.8 2E-17 6.9E-22 130.0 16.7 152 3-180 18-189 (740)
166 3fvz_A Peptidyl-glycine alpha- 99.8 7.6E-16 2.6E-20 110.1 21.3 192 1-196 23-281 (329)
167 4a5s_A Dipeptidyl peptidase 4 99.7 2.4E-16 8.1E-21 123.9 18.7 186 5-195 65-356 (740)
168 3azo_A Aminopeptidase; POP fam 99.7 6.2E-16 2.1E-20 120.0 20.2 190 2-194 24-276 (662)
169 3c5m_A Oligogalacturonate lyas 99.7 2.4E-16 8.2E-21 114.9 15.7 185 4-195 38-276 (396)
170 1q7f_A NHL, brain tumor CG1071 99.7 4.8E-15 1.6E-19 103.8 21.5 160 3-197 122-285 (286)
171 3fvz_A Peptidyl-glycine alpha- 99.7 5.1E-15 1.8E-19 105.8 20.9 189 3-193 92-323 (329)
172 3azo_A Aminopeptidase; POP fam 99.7 4.6E-16 1.6E-20 120.7 15.7 166 3-194 131-327 (662)
173 1q7f_A NHL, brain tumor CG1071 99.7 2.5E-14 8.5E-19 100.1 21.8 185 3-191 31-237 (286)
174 1xip_A Nucleoporin NUP159; bet 99.7 2.8E-15 9.5E-20 108.6 17.0 162 3-178 39-230 (388)
175 1rwi_B Serine/threonine-protei 99.7 4.2E-14 1.5E-18 98.0 21.8 190 3-198 68-270 (270)
176 2gop_A Trilobed protease; beta 99.7 9.9E-15 3.4E-19 104.7 19.0 177 3-194 60-293 (347)
177 2xdw_A Prolyl endopeptidase; a 99.7 2.8E-14 9.6E-19 111.7 22.5 188 3-195 126-371 (710)
178 2mad_H Methylamine dehydrogena 99.7 1.7E-13 5.8E-18 99.5 24.5 187 6-197 70-355 (373)
179 3dsm_A Uncharacterized protein 99.7 6.5E-14 2.2E-18 100.1 22.1 183 4-195 46-256 (328)
180 1qks_A Cytochrome CD1 nitrite 99.7 1.6E-13 5.6E-18 104.5 25.3 185 3-192 198-421 (567)
181 3e5z_A Putative gluconolactona 99.7 9.8E-14 3.3E-18 97.6 22.1 181 3-195 29-248 (296)
182 2xdw_A Prolyl endopeptidase; a 99.7 1.8E-13 6E-18 107.3 24.3 190 4-194 173-416 (710)
183 3pe7_A Oligogalacturonate lyas 99.7 2.5E-14 8.5E-19 104.1 18.2 187 5-195 84-332 (388)
184 3c5m_A Oligogalacturonate lyas 99.6 7.6E-15 2.6E-19 106.9 15.3 182 6-195 85-332 (396)
185 3dsm_A Uncharacterized protein 99.6 2.3E-13 8E-18 97.2 21.6 188 3-196 85-305 (328)
186 3no2_A Uncharacterized protein 99.6 9.3E-14 3.2E-18 96.9 18.7 175 12-196 4-199 (276)
187 2dg1_A DRP35, lactonase; beta 99.6 1.4E-12 4.8E-17 93.1 24.2 183 3-191 46-262 (333)
188 3e5z_A Putative gluconolactona 99.6 9.6E-13 3.3E-17 92.5 22.6 189 3-197 70-291 (296)
189 2bkl_A Prolyl endopeptidase; m 99.6 7.2E-14 2.5E-18 109.2 17.4 170 3-194 122-306 (695)
190 2oiz_A Aromatic amine dehydrog 99.6 5.8E-13 2E-17 96.4 20.6 74 96-174 285-360 (361)
191 1rwi_B Serine/threonine-protei 99.6 1.5E-12 5E-17 90.2 21.0 186 3-194 25-224 (270)
192 2gop_A Trilobed protease; beta 99.6 8.1E-13 2.8E-17 94.7 20.1 171 4-191 106-330 (347)
193 3c75_H MADH, methylamine dehyd 99.6 5.1E-13 1.7E-17 98.0 18.9 189 6-197 122-407 (426)
194 2bkl_A Prolyl endopeptidase; m 99.6 1.9E-13 6.3E-18 106.9 17.7 190 5-195 171-400 (695)
195 1qks_A Cytochrome CD1 nitrite 99.6 3E-12 1E-16 97.6 23.1 180 12-196 166-377 (567)
196 2z2n_A Virginiamycin B lyase; 99.6 1.2E-11 4.1E-16 86.6 24.3 185 3-194 16-214 (299)
197 2dg1_A DRP35, lactonase; beta 99.5 8E-12 2.7E-16 89.2 22.5 177 3-182 88-300 (333)
198 1mda_H Methylamine dehydrogena 99.5 2.6E-12 8.9E-17 92.8 18.7 189 6-197 69-351 (368)
199 2z2n_A Virginiamycin B lyase; 99.5 5.2E-11 1.8E-15 83.4 24.3 182 3-190 58-253 (299)
200 3no2_A Uncharacterized protein 99.5 4.3E-11 1.5E-15 83.4 23.5 170 3-179 38-230 (276)
201 2hz6_A Endoplasmic reticulum t 99.5 7.6E-14 2.6E-18 101.3 8.9 172 12-196 8-196 (369)
202 3hrp_A Uncharacterized protein 99.5 5.4E-11 1.9E-15 87.5 24.1 185 3-195 132-357 (409)
203 1yr2_A Prolyl oligopeptidase; 99.5 1.1E-11 3.6E-16 97.7 21.0 182 3-191 164-392 (741)
204 1yr2_A Prolyl oligopeptidase; 99.5 7.9E-12 2.7E-16 98.4 20.2 188 5-194 212-443 (741)
205 3sjl_D Methylamine dehydrogena 99.5 1.1E-11 3.7E-16 89.7 19.0 190 4-197 139-368 (386)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 2E-11 6.9E-16 86.2 20.2 162 3-193 118-300 (314)
207 2qc5_A Streptogramin B lactona 99.4 4E-10 1.4E-14 78.9 24.2 185 3-194 21-219 (300)
208 3g4e_A Regucalcin; six bladed 99.4 1.5E-10 5E-15 81.6 21.6 184 5-196 16-233 (297)
209 2qc5_A Streptogramin B lactona 99.4 8.5E-10 2.9E-14 77.2 24.4 182 3-190 63-258 (300)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 3.2E-10 1.1E-14 80.0 22.3 187 3-196 19-260 (314)
211 3g4e_A Regucalcin; six bladed 99.4 1.6E-10 5.5E-15 81.3 20.0 173 2-178 54-258 (297)
212 2iwa_A Glutamine cyclotransfer 99.4 5.2E-10 1.8E-14 77.0 21.4 185 4-193 23-238 (266)
213 3hrp_A Uncharacterized protein 99.4 7.6E-10 2.6E-14 81.4 23.3 181 7-191 176-409 (409)
214 3iuj_A Prolyl endopeptidase; h 99.4 1.4E-10 4.8E-15 90.7 20.4 186 5-194 178-407 (693)
215 1xip_A Nucleoporin NUP159; bet 99.3 7.5E-11 2.6E-15 85.6 14.6 134 47-194 39-193 (388)
216 3iuj_A Prolyl endopeptidase; h 99.3 2.8E-10 9.6E-15 89.0 18.8 170 3-195 130-317 (693)
217 3dr2_A Exported gluconolactona 99.3 2E-09 6.8E-14 76.0 20.8 181 4-195 47-269 (305)
218 2qe8_A Uncharacterized protein 99.3 3.2E-10 1.1E-14 81.4 16.4 178 2-194 67-280 (343)
219 3sjl_D Methylamine dehydrogena 99.3 4.9E-10 1.7E-14 81.1 17.1 148 7-192 38-208 (386)
220 2ghs_A AGR_C_1268P; regucalcin 99.3 4.1E-09 1.4E-13 75.2 21.2 179 5-195 52-262 (326)
221 2mad_H Methylamine dehydrogena 99.2 2.4E-09 8.1E-14 77.8 18.7 146 9-195 28-198 (373)
222 3nol_A Glutamine cyclotransfer 99.2 2E-09 7E-14 73.4 17.1 156 4-197 45-206 (262)
223 1fwx_A Nitrous oxide reductase 99.2 6.9E-10 2.4E-14 83.9 15.6 178 3-192 135-361 (595)
224 2ece_A 462AA long hypothetical 99.2 9.8E-10 3.4E-14 80.5 15.4 158 6-180 192-399 (462)
225 3nok_A Glutaminyl cyclase; bet 99.2 4.6E-09 1.6E-13 71.8 16.9 154 5-197 58-215 (268)
226 2ghs_A AGR_C_1268P; regucalcin 99.2 1.9E-08 6.5E-13 71.7 21.0 148 3-179 135-289 (326)
227 1kb0_A Quinohemoprotein alcoho 99.2 6.2E-09 2.1E-13 81.2 18.6 171 22-196 189-511 (677)
228 3mbr_X Glutamine cyclotransfer 99.1 3.1E-08 1.1E-12 67.1 19.1 156 4-197 23-184 (243)
229 1yiq_A Quinohemoprotein alcoho 99.1 1.1E-08 3.9E-13 79.9 19.2 171 22-196 182-509 (689)
230 1npe_A Nidogen, entactin; glyc 99.1 3.3E-07 1.1E-11 63.4 24.7 186 4-196 38-242 (267)
231 3c75_H MADH, methylamine dehyd 99.1 1.5E-08 5.1E-13 74.5 16.3 114 11-158 82-218 (426)
232 2iwa_A Glutamine cyclotransfer 99.1 4.7E-08 1.6E-12 67.3 17.4 145 48-197 23-186 (266)
233 2ece_A 462AA long hypothetical 99.0 1.2E-07 4.2E-12 69.6 18.5 137 55-192 93-289 (462)
234 2qe8_A Uncharacterized protein 99.0 1.4E-08 4.7E-13 73.0 13.5 157 4-182 122-311 (343)
235 3dr2_A Exported gluconolactona 99.0 6.1E-08 2.1E-12 68.4 16.2 145 3-183 132-298 (305)
236 1fwx_A Nitrous oxide reductase 99.0 1.4E-08 4.8E-13 76.9 12.4 168 5-194 198-433 (595)
237 2xe4_A Oligopeptidase B; hydro 98.9 2.5E-07 8.5E-12 73.2 18.5 161 3-192 175-354 (751)
238 3tc9_A Hypothetical hydrolase; 98.9 6.8E-07 2.3E-11 66.2 19.6 156 3-191 138-300 (430)
239 2p4o_A Hypothetical protein; p 98.9 1.9E-06 6.6E-11 60.8 20.7 182 4-194 34-243 (306)
240 1kb0_A Quinohemoprotein alcoho 98.9 1.7E-07 5.9E-12 73.2 16.4 79 97-177 457-535 (677)
241 3q7m_A Lipoprotein YFGL, BAMB; 98.9 7.8E-07 2.7E-11 64.5 18.6 180 12-196 52-262 (376)
242 3q7m_A Lipoprotein YFGL, BAMB; 98.9 1.6E-06 5.5E-11 62.8 20.0 172 15-196 145-341 (376)
243 1yiq_A Quinohemoprotein alcoho 98.8 4.2E-07 1.4E-11 71.2 17.6 180 13-196 70-342 (689)
244 2hz6_A Endoplasmic reticulum t 98.8 8.8E-10 3E-14 80.0 1.8 133 56-196 8-153 (369)
245 1kv9_A Type II quinohemoprotei 98.8 7.1E-07 2.4E-11 69.7 17.7 171 22-196 177-492 (668)
246 1npe_A Nidogen, entactin; glyc 98.8 7.7E-06 2.6E-10 56.4 23.3 177 13-193 1-199 (267)
247 2ad6_A Methanol dehydrogenase 98.8 2E-06 6.9E-11 65.9 18.2 56 139-196 443-498 (571)
248 2fp8_A Strictosidine synthase; 98.7 8E-06 2.7E-10 57.9 19.8 156 4-193 128-314 (322)
249 3v65_B Low-density lipoprotein 98.7 2.5E-05 8.5E-10 57.0 24.4 187 3-195 117-321 (386)
250 2fp8_A Strictosidine synthase; 98.7 6.6E-06 2.3E-10 58.4 18.4 158 4-192 21-216 (322)
251 1kv9_A Type II quinohemoprotei 98.7 2.9E-06 1E-10 66.3 17.7 180 13-196 66-337 (668)
252 1k3i_A Galactose oxidase precu 98.6 2.5E-06 8.6E-11 66.5 16.1 187 6-194 247-499 (656)
253 3hxj_A Pyrrolo-quinoline quino 98.6 9.3E-06 3.2E-10 57.5 17.3 175 5-194 140-326 (330)
254 1mda_H Methylamine dehydrogena 98.6 2.5E-07 8.5E-12 66.9 9.0 92 98-192 47-158 (368)
255 3nol_A Glutamine cyclotransfer 98.6 9.4E-06 3.2E-10 55.5 15.7 134 10-180 93-243 (262)
256 3v64_C Agrin; beta propeller, 98.6 6.6E-05 2.2E-09 54.0 25.5 187 3-195 74-278 (349)
257 1flg_A Protein (quinoprotein e 98.6 9.8E-06 3.4E-10 62.3 17.0 56 139-196 465-520 (582)
258 1w6s_A Methanol dehydrogenase 98.6 8.2E-06 2.8E-10 62.8 16.5 56 139-196 452-507 (599)
259 3nok_A Glutaminyl cyclase; bet 98.5 2.2E-05 7.5E-10 53.8 16.6 132 11-179 103-253 (268)
260 3hxj_A Pyrrolo-quinoline quino 98.5 1.7E-05 5.6E-10 56.2 16.8 168 13-195 107-286 (330)
261 1w6s_A Methanol dehydrogenase 98.5 5.2E-05 1.8E-09 58.5 20.0 180 14-196 63-346 (599)
262 3mbr_X Glutamine cyclotransfer 98.5 5.1E-05 1.7E-09 51.4 17.6 132 12-180 73-222 (243)
263 4hw6_A Hypothetical protein, I 98.5 5.5E-05 1.9E-09 56.1 19.4 155 3-191 140-303 (433)
264 3v65_B Low-density lipoprotein 98.4 0.00017 5.7E-09 52.7 23.7 166 22-192 95-277 (386)
265 4hw6_A Hypothetical protein, I 98.4 6E-05 2.1E-09 55.8 17.9 174 4-191 230-432 (433)
266 3v64_C Agrin; beta propeller, 98.4 0.00017 5.9E-09 51.8 24.0 181 5-192 37-234 (349)
267 2p4o_A Hypothetical protein; p 98.4 0.00015 5.3E-09 51.0 21.4 174 3-180 73-276 (306)
268 3kya_A Putative phosphatase; s 98.4 5.1E-05 1.7E-09 56.9 17.1 161 4-191 141-340 (496)
269 1ijq_A LDL receptor, low-densi 98.4 0.00019 6.4E-09 50.9 24.7 171 16-192 4-195 (316)
270 3amr_A 3-phytase; beta-propell 98.4 0.0002 7E-09 51.1 20.7 178 13-196 40-268 (355)
271 1ijq_A LDL receptor, low-densi 98.4 0.00019 6.6E-09 50.8 25.8 189 3-195 31-241 (316)
272 2xe4_A Oligopeptidase B; hydro 98.4 8.3E-05 2.8E-09 59.0 18.5 156 5-190 224-398 (751)
273 2p9w_A MAL S 1 allergenic prot 98.3 0.00028 9.6E-09 50.0 19.0 168 5-192 16-215 (334)
274 3p5b_L Low density lipoprotein 98.3 0.00044 1.5E-08 50.7 25.5 191 2-196 112-324 (400)
275 1flg_A Protein (quinoprotein e 98.3 0.00067 2.3E-08 52.3 21.1 177 15-196 70-359 (582)
276 1k3i_A Galactose oxidase precu 98.3 6.2E-05 2.1E-09 58.8 15.5 185 6-193 190-442 (656)
277 3sov_A LRP-6, low-density lipo 98.3 0.0004 1.4E-08 49.3 24.7 188 3-195 36-241 (318)
278 1n7d_A LDL receptor, low-densi 98.3 3E-05 1E-09 60.9 13.5 189 3-196 407-618 (699)
279 3qqz_A Putative uncharacterize 98.2 0.00039 1.3E-08 47.6 24.7 186 2-192 27-253 (255)
280 2ad6_A Methanol dehydrogenase 98.2 0.00095 3.3E-08 51.3 20.2 178 14-196 63-339 (571)
281 3p5b_L Low density lipoprotein 98.2 0.00078 2.7E-08 49.4 24.7 173 15-193 85-278 (400)
282 3pbp_A Nucleoporin NUP82; beta 98.2 0.00077 2.6E-08 49.4 18.0 163 11-188 30-208 (452)
283 3m0c_C LDL receptor, low-densi 98.1 0.0018 6.2E-08 51.6 25.3 189 3-195 425-635 (791)
284 3kya_A Putative phosphatase; s 98.1 0.0014 4.7E-08 49.3 19.4 177 4-195 249-478 (496)
285 3tc9_A Hypothetical hydrolase; 98.1 0.0014 4.7E-08 48.6 20.2 173 4-191 228-429 (430)
286 4a2l_A BT_4663, two-component 98.0 0.0029 9.8E-08 50.5 23.0 184 3-194 216-438 (795)
287 3sov_A LRP-6, low-density lipo 98.0 0.0014 4.8E-08 46.5 22.7 166 22-192 12-197 (318)
288 1n7d_A LDL receptor, low-densi 98.0 0.00011 3.8E-09 57.8 12.3 165 22-192 385-571 (699)
289 4a2l_A BT_4663, two-component 98.0 0.0038 1.3E-07 49.9 22.8 183 3-194 264-482 (795)
290 3qqz_A Putative uncharacterize 98.0 0.001 3.5E-08 45.5 15.1 116 45-191 26-150 (255)
291 3sre_A PON1, serum paraoxonase 98.0 0.0022 7.5E-08 46.2 20.5 70 119-192 165-252 (355)
292 3m0c_C LDL receptor, low-densi 97.9 0.0051 1.8E-07 49.1 23.8 166 22-192 403-589 (791)
293 3s94_A LRP-6, low-density lipo 97.9 0.0045 1.5E-07 48.1 23.3 188 3-195 41-246 (619)
294 4a0p_A LRP6, LRP-6, low-densit 97.9 0.0049 1.7E-07 47.9 26.0 186 3-195 38-240 (628)
295 1tl2_A L10, protein (tachylect 97.9 0.0022 7.5E-08 42.8 15.2 150 3-185 42-203 (236)
296 3v9f_A Two-component system se 97.8 0.0067 2.3E-07 48.3 22.2 184 3-194 364-570 (781)
297 2g8s_A Glucose/sorbosone dehyd 97.8 0.0021 7E-08 46.3 15.2 60 3-63 19-86 (353)
298 2ism_A Putative oxidoreductase 97.8 0.0046 1.6E-07 44.5 17.1 58 3-64 32-96 (352)
299 2p9w_A MAL S 1 allergenic prot 97.8 0.0048 1.6E-07 43.8 16.2 161 3-190 64-263 (334)
300 1cru_A Protein (soluble quinop 97.7 0.0072 2.5E-07 45.1 21.3 60 3-63 28-97 (454)
301 3a9g_A Putative uncharacterize 97.7 0.0063 2.1E-07 43.8 15.5 57 3-63 30-93 (354)
302 3pbp_A Nucleoporin NUP82; beta 97.6 0.011 3.8E-07 43.4 15.7 121 3-145 67-208 (452)
303 2be1_A Serine/threonine-protei 97.5 0.0024 8.2E-08 45.6 11.3 178 14-196 11-235 (339)
304 3v9f_A Two-component system se 97.5 0.027 9.3E-07 44.9 22.2 183 3-194 314-526 (781)
305 3amr_A 3-phytase; beta-propell 97.5 0.015 5E-07 41.7 16.4 100 90-191 90-209 (355)
306 2vpj_A Kelch-like protein 12; 97.4 0.014 4.8E-07 40.7 16.8 176 12-194 62-280 (301)
307 2xn4_A Kelch-like protein 2; s 97.4 0.014 4.9E-07 40.7 15.7 176 12-194 61-278 (302)
308 3s94_A LRP-6, low-density lipo 97.4 0.027 9.3E-07 43.8 23.1 156 3-192 350-510 (619)
309 3s25_A Hypothetical 7-bladed b 97.4 0.015 5.1E-07 40.9 14.5 157 7-181 58-242 (302)
310 2xzh_A Clathrin heavy chain 1; 97.4 0.017 5.9E-07 41.0 22.6 181 7-196 72-294 (365)
311 3das_A Putative oxidoreductase 97.3 0.021 7.3E-07 41.0 17.3 155 3-178 33-218 (347)
312 3ii7_A Kelch-like protein 7; p 97.3 0.021 7.1E-07 39.9 17.0 175 12-194 55-274 (306)
313 4a0p_A LRP6, LRP-6, low-densit 97.3 0.043 1.5E-06 42.8 25.2 190 2-195 340-552 (628)
314 1tl2_A L10, protein (tachylect 97.2 0.014 4.9E-07 38.9 11.6 145 12-189 3-160 (236)
315 1bpo_A Protein (clathrin); cla 97.1 0.046 1.6E-06 40.5 22.4 181 7-196 71-293 (494)
316 2xbg_A YCF48-like protein; pho 97.1 0.037 1.3E-06 39.3 19.1 178 3-190 123-320 (327)
317 3a9g_A Putative uncharacterize 97.1 0.045 1.6E-06 39.4 23.9 62 119-180 259-330 (354)
318 3sre_A PON1, serum paraoxonase 97.0 0.034 1.2E-06 40.1 12.6 115 3-148 166-297 (355)
319 2ism_A Putative oxidoreductase 96.9 0.059 2E-06 38.7 19.7 58 120-179 269-332 (352)
320 4asc_A Kelch repeat and BTB do 96.9 0.06 2.1E-06 37.8 15.4 101 88-193 150-278 (315)
321 1zgk_A Kelch-like ECH-associat 96.8 0.069 2.4E-06 37.4 15.5 174 12-194 70-289 (308)
322 3ei3_A DNA damage-binding prot 96.8 0.2 6.8E-06 42.0 19.3 144 13-192 844-999 (1158)
323 2vpj_A Kelch-like protein 12; 96.7 0.074 2.5E-06 37.0 16.6 175 12-194 14-233 (301)
324 2xzh_A Clathrin heavy chain 1; 96.5 0.14 4.6E-06 36.6 21.8 190 2-194 107-334 (365)
325 3ii7_A Kelch-like protein 7; p 96.5 0.12 4.2E-06 36.0 16.8 173 13-193 12-226 (306)
326 1xi4_A Clathrin heavy chain; a 96.4 0.29 9.9E-06 41.9 15.5 180 8-196 72-293 (1630)
327 3sbq_A Nitrous-oxide reductase 96.4 0.23 7.9E-06 38.1 14.3 87 45-149 322-408 (638)
328 1zgk_A Kelch-like ECH-associat 96.3 0.15 5.2E-06 35.6 15.6 175 12-194 24-242 (308)
329 2woz_A Kelch repeat and BTB do 96.3 0.16 5.4E-06 35.7 16.1 101 88-193 160-288 (318)
330 2be1_A Serine/threonine-protei 96.3 0.013 4.3E-07 42.0 6.4 66 131-196 57-134 (339)
331 2uvk_A YJHT; unknown function, 96.2 0.19 6.6E-06 35.8 12.6 55 141-196 286-346 (357)
332 2xn4_A Kelch-like protein 2; s 96.1 0.19 6.4E-06 34.9 16.4 175 12-194 15-231 (302)
333 4asc_A Kelch repeat and BTB do 96.0 0.23 7.7E-06 34.8 16.6 170 15-193 7-222 (315)
334 1cru_A Protein (soluble quinop 95.9 0.35 1.2E-05 36.1 13.6 109 47-180 28-162 (454)
335 1bpo_A Protein (clathrin); cla 95.9 0.37 1.3E-05 35.8 22.7 189 3-194 107-333 (494)
336 2xbg_A YCF48-like protein; pho 95.7 0.33 1.1E-05 34.4 22.0 178 2-189 36-231 (327)
337 2woz_A Kelch repeat and BTB do 95.7 0.32 1.1E-05 34.1 14.9 65 128-194 157-233 (318)
338 3ei3_A DNA damage-binding prot 95.6 0.87 3E-05 38.3 22.2 93 99-195 494-594 (1158)
339 3s25_A Hypothetical 7-bladed b 95.5 0.4 1.4E-05 33.6 14.3 52 9-67 21-74 (302)
340 3sbq_A Nitrous-oxide reductase 95.3 0.19 6.5E-06 38.5 9.5 94 98-192 299-408 (638)
341 2wg3_C Hedgehog-interacting pr 95.3 0.63 2.2E-05 34.9 16.6 54 3-56 15-79 (463)
342 2g8s_A Glucose/sorbosone dehyd 95.2 0.56 1.9E-05 33.7 21.0 66 120-185 272-347 (353)
343 2zwa_A Leucine carboxyl methyl 95.2 0.9 3.1E-05 35.9 17.1 181 11-194 396-637 (695)
344 3zwu_A Alkaline phosphatase PH 94.4 0.31 1E-05 37.7 8.8 59 121-179 478-548 (592)
345 1xi4_A Clathrin heavy chain; a 94.3 2.4 8E-05 36.7 18.1 153 2-156 106-296 (1630)
346 4a9v_A PHOX; hydrolase, beta-p 93.6 0.83 2.8E-05 35.2 9.6 61 119-179 476-548 (592)
347 2wg3_C Hedgehog-interacting pr 92.1 2.9 9.8E-05 31.4 15.3 28 47-75 15-43 (463)
348 4gq2_M Nucleoporin NUP120; bet 90.6 1.9 6.4E-05 35.6 9.0 37 120-156 237-273 (950)
349 3zwu_A Alkaline phosphatase PH 90.3 1.6 5.6E-05 33.8 8.0 59 5-64 479-549 (592)
350 3das_A Putative oxidoreductase 89.8 4.3 0.00015 29.2 22.9 176 3-179 81-325 (347)
351 2uvk_A YJHT; unknown function, 89.1 4.6 0.00016 28.6 12.9 50 140-190 168-224 (357)
352 4gq2_M Nucleoporin NUP120; bet 88.4 0.67 2.3E-05 38.1 5.0 35 163-197 237-271 (950)
353 2zwa_A Leucine carboxyl methyl 88.0 8.6 0.00029 30.5 13.5 28 126-153 604-639 (695)
354 4a9v_A PHOX; hydrolase, beta-p 86.9 5.5 0.00019 30.8 8.8 62 3-65 477-550 (592)
355 4fhn_B Nucleoporin NUP120; pro 83.6 0.66 2.2E-05 39.0 2.8 35 163-197 239-273 (1139)
356 4fhn_B Nucleoporin NUP120; pro 80.6 2 6.7E-05 36.2 4.5 36 121-156 240-275 (1139)
357 3f7f_A Nucleoporin NUP120; nuc 78.3 3.4 0.00012 32.8 4.9 32 164-197 224-255 (729)
358 3q6k_A 43.2 kDa salivary prote 78.2 17 0.00059 26.5 19.0 177 3-192 88-306 (381)
359 3f7f_A Nucleoporin NUP120; nuc 75.5 7.1 0.00024 31.1 5.9 34 121-156 224-257 (729)
360 3ott_A Two-component system se 69.0 42 0.0014 26.7 21.4 177 3-194 64-262 (758)
361 3q6k_A 43.2 kDa salivary prote 66.5 35 0.0012 24.9 20.0 59 121-179 277-341 (381)
362 3al9_A Plexin-A2; beta-propell 62.3 39 0.0013 26.0 7.4 68 120-187 401-476 (539)
363 1q47_A Semaphorin 3A; beta pro 61.9 50 0.0017 25.1 9.3 68 120-187 405-487 (495)
364 1q47_A Semaphorin 3A; beta pro 61.5 43 0.0015 25.4 7.5 57 88-144 422-487 (495)
365 1suu_A DNA gyrase subunit A; t 56.5 49 0.0017 23.2 20.5 180 11-192 6-231 (312)
366 3ott_A Two-component system se 56.4 74 0.0025 25.3 20.0 74 119-194 472-547 (758)
367 3b7f_A Glycosyl hydrolase, BNR 52.5 62 0.0021 23.2 15.6 21 163-183 233-254 (394)
368 1sqj_A OXG-RCBH, oligoxylogluc 48.3 1.1E+02 0.0037 24.8 16.5 56 2-58 15-76 (789)
369 4gz8_A Semaphorin-3A; multi-do 44.7 96 0.0033 24.7 7.2 56 89-144 431-495 (667)
370 3mez_B Mannose-specific lectin 44.5 44 0.0015 19.2 7.1 12 178-189 94-105 (113)
371 3ol2_B Plexin-B1; beta-propell 43.2 88 0.003 24.0 6.6 68 120-187 388-461 (528)
372 1ukf_A Avirulence protein AVRP 42.4 34 0.0012 22.1 3.6 34 161-194 118-152 (188)
373 3nvq_A Semaphorin-7A; beta-pro 41.6 1.3E+02 0.0043 23.6 7.3 56 132-187 382-444 (590)
374 3nvq_A Semaphorin-7A; beta-pro 41.1 1.1E+02 0.0037 24.0 6.9 56 88-143 381-443 (590)
375 4gz8_A Semaphorin-3A; multi-do 40.5 1.4E+02 0.0047 23.8 10.3 56 132-187 431-495 (667)
376 3al9_A Plexin-A2; beta-propell 37.2 1.1E+02 0.0036 23.7 6.3 61 14-76 414-479 (539)
377 2zux_A YESW protein; beta-prop 37.2 1.5E+02 0.0051 23.2 14.3 47 150-196 352-404 (591)
378 3qhy_B Beta-lactamase inhibito 36.2 1E+02 0.0035 21.1 15.9 172 4-193 26-208 (282)
379 1olz_A Semaphorin 4D; developm 34.0 1.8E+02 0.0061 23.2 7.4 56 88-143 416-476 (663)
380 3oky_B Putative uncharacterize 33.3 1.7E+02 0.0058 22.8 8.7 68 120-187 404-495 (565)
381 1zso_A Hypothetical protein; s 32.3 91 0.0031 19.7 4.4 31 163-193 111-141 (164)
382 1olz_A Semaphorin 4D; developm 29.4 2.1E+02 0.0073 22.7 7.8 67 121-187 399-477 (663)
383 3no0_A DNA gyrase subunit A; D 28.8 1.4E+02 0.0049 20.4 19.3 156 12-192 79-246 (276)
384 3b7f_A Glycosyl hydrolase, BNR 27.5 1.7E+02 0.0058 20.9 17.3 48 15-63 24-73 (394)
385 3oky_B Putative uncharacterize 27.3 2.2E+02 0.0076 22.2 6.9 27 118-144 469-495 (565)
386 3mwp_A Nucleoprotein; structur 27.3 18 0.00062 26.8 0.7 19 178-196 162-180 (577)
387 3oky_A Plexin-A2; transmembran 26.7 1.9E+02 0.0066 23.1 6.3 56 132-187 414-475 (681)
388 3oky_A Plexin-A2; transmembran 26.4 1.8E+02 0.0061 23.3 6.0 57 88-144 413-475 (681)
389 3ol2_B Plexin-B1; beta-propell 25.5 2.3E+02 0.0079 21.8 6.9 57 88-144 401-461 (528)
390 3mez_A Mannose-specific lectin 25.0 1E+02 0.0035 17.6 8.2 15 122-136 87-101 (111)
391 3ge2_A Lipoprotein, putative; 24.0 1.2E+02 0.0041 18.0 4.4 31 158-191 79-109 (130)
392 4h3o_A Lectin; cadmium, plant 23.8 1.1E+02 0.0037 17.3 10.9 14 123-136 86-99 (105)
393 3qhy_B Beta-lactamase inhibito 21.6 2E+02 0.0068 19.6 16.4 155 22-193 80-247 (282)
394 3no0_A DNA gyrase subunit A; D 20.9 2.1E+02 0.0071 19.6 15.6 73 119-191 116-195 (276)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=235.13 Aligned_cols=188 Identities=15% Similarity=0.153 Sum_probs=160.4
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
+.|++++|+|+|++|++|+.|+.|++||+.+++....+.. |...|.+++|+|++..++++++.|+.|++||+++.+..
T Consensus 128 ~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~--h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~ 205 (344)
T 4gqb_B 128 DIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA--HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPA 205 (344)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCE
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC--cCCceEEEEecCCCCCceeeecccccccccccccccee
Confidence 4699999999999999999999999999999887666654 57889999999999877777889999999999865432
Q ss_pred c----------------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC-CEEEEeecCCcEEE
Q psy8758 82 L----------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG-REFVAGGYDKSLRL 144 (198)
Q Consensus 82 ~----------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~d~~v~v 144 (198)
. ......++++++.|+.|++||+++ ++++..+.+|...|++++|+|++ ++|++++.|++|++
T Consensus 206 ~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~v 284 (344)
T 4gqb_B 206 SQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS-TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAV 284 (344)
T ss_dssp EECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred eeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC-CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEE
Confidence 1 112345789999999999999998 78889999999999999999998 58999999999999
Q ss_pred EEcCCCceeeEEeccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecCCCc
Q psy8758 145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~~~ 194 (198)
||+.+++.... .+|...|++++|+|+++ +|++++.|++|++|++.+..
T Consensus 285 wd~~~~~~~~~--~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 285 LDSSLSELFRS--QAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp ECTTCCEEEEE--CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EECCCCcEEEE--cCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 99999886543 68999999999999986 57789999999999998754
No 2
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.4e-38 Score=228.38 Aligned_cols=187 Identities=17% Similarity=0.159 Sum_probs=160.7
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
+.|++++|+|++++|++++.|+.|++||+.+++....+.. |...|.+++|+|++..++++++.|+.|++||+++....
T Consensus 140 ~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~--h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~ 217 (357)
T 4g56_B 140 DIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA--HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA 217 (357)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC--CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCcee
Confidence 4699999999999999999999999999998887666654 57789999999998766666789999999999765421
Q ss_pred c--------------cc--ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC-CEEEEeecCCcEEE
Q psy8758 82 L--------------NV--HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG-REFVAGGYDKSLRL 144 (198)
Q Consensus 82 ~--------------~~--~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~-~~l~~~~~d~~v~v 144 (198)
. .. ..+.++++++.|+.|++||+++ .+++..+..|...|++++|+|++ ++|++++.|++|+|
T Consensus 218 ~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~i 296 (357)
T 4g56_B 218 TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN-PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAV 296 (357)
T ss_dssp CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC-GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred eeeeeccccccccchhhhhcccceEEEeecccceeEEECCC-CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEE
Confidence 1 11 2245788999999999999998 68888999999999999999987 58999999999999
Q ss_pred EEcCCCceeeEEeccCcccEEEEEEcC-CCCEEEEecCCCeEEEEecCCC
Q psy8758 145 YLAHQGHSRDIYHTKRMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHAS 193 (198)
Q Consensus 145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~~~~ 193 (198)
||+++++.+.. .+|...|++++|+| ++++|++++.||+|++|++.+.
T Consensus 297 wd~~~~~~~~~--~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 297 LDADFSEVFRD--LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp ECTTSCEEEEE--CCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--
T ss_pred EECCCCcEeEE--CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCC
Confidence 99999987765 47999999999999 7999999999999999999754
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.7e-37 Score=219.12 Aligned_cols=192 Identities=12% Similarity=0.263 Sum_probs=165.0
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS- 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~- 80 (198)
+.|++++|+|++++|++++.||.|++||+.+++....+.. +..++.+++|+|+++.+++ |+.|+.|++||+.+...
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s-~s~d~~i~vwd~~~~~~~ 90 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQV--TETPVRAGKFIARKNWIIV-GSDDFRIRVFNYNTGEKV 90 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEEEGGGTEEEE-EETTSEEEEEETTTCCEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeec--cCCcEEEEEEeCCCCEEEE-ECCCCEEEEEECCCCcEE
Confidence 5799999999999999999999999999998876666554 4678999999999998876 56999999999986543
Q ss_pred -cccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-CCCEEEEeecCCcEEEEEc
Q psy8758 81 -PLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLA 147 (198)
Q Consensus 81 -~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~d~~v~v~d~ 147 (198)
.+..|. +..+++++.|++|++||+++.......+.+|...|.+++|+| ++..|++++.|+.|++||+
T Consensus 91 ~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~ 170 (304)
T 2ynn_A 91 VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (304)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEET
T ss_pred EEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 233343 346899999999999999974456677889999999999999 5789999999999999999
Q ss_pred CCCceeeEEeccCcccEEEEEEcC--CCCEEEEecCCCeEEEEecCCCccc
Q psy8758 148 HQGHSRDIYHTKRMQHVTHTVWSL--DNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+.+.....+..+|...+..+.|+| ++++|++++.|+.|++||+++++++
T Consensus 171 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~ 221 (304)
T 2ynn_A 171 GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV 221 (304)
T ss_dssp TCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc
Confidence 988877777667778899999987 6789999999999999999998764
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.3e-37 Score=220.76 Aligned_cols=190 Identities=21% Similarity=0.338 Sum_probs=166.1
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS- 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~- 80 (198)
++|.+++|+|++++|++++.||.|++||+.+++....+.. +...|.+++|+|+++++++ ++.|+.+++|++.+...
T Consensus 56 ~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s-~~~d~~v~iw~~~~~~~~ 132 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL--RSSWVMTCAYAPSGNYVAC-GGLDNICSIYNLKTREGN 132 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC--SSSCEEEEEECTTSSEEEE-EETTCEEEEEETTTCSBS
T ss_pred CceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeec--CCccEEEEEECCCCCEEEE-EeCCCeEEEEECccCCCc
Confidence 5799999999999999999999999999988876665544 5778999999999998876 46899999999876431
Q ss_pred -----cccccc----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEE
Q psy8758 81 -----PLNVHK----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY 145 (198)
Q Consensus 81 -----~~~~~~----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~ 145 (198)
.+..|. +..+++++.|+.|++||+++ ++++..+.+|...|.+++|+|+++++++++.|+.|++|
T Consensus 133 ~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~w 211 (340)
T 1got_B 133 VRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIET-GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW 211 (340)
T ss_dssp CEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCC-CcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence 122332 34588999999999999998 68888899999999999999999999999999999999
Q ss_pred EcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
|++++.....+ .+|...|.+++|+|++++|++++.||.|++||+++++.+
T Consensus 212 d~~~~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 212 DVREGMCRQTF-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261 (340)
T ss_dssp ETTTCSEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred ECCCCeeEEEE-cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEE
Confidence 99999888776 688899999999999999999999999999999887653
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=219.55 Aligned_cols=190 Identities=14% Similarity=0.230 Sum_probs=167.1
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
..|.+++|+|++.++++++.|+.|++||+.+++....+.. +...+.+++|+|+++.+++ ++.++.+++|+++.....
T Consensus 81 ~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~-g~~dg~v~i~~~~~~~~~ 157 (321)
T 3ow8_A 81 LGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA--GPVDAWTLAFSPDSQYLAT-GTHVGKVNIFGVESGKKE 157 (321)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC--CTTCCCCEEECTTSSEEEE-ECTTSEEEEEETTTCSEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeC--CCccEEEEEECCCCCEEEE-EcCCCcEEEEEcCCCcee
Confidence 4689999999999999999999999999998887666554 4667889999999998876 579999999999865432
Q ss_pred cc--c-----------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758 82 LN--V-----------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH 148 (198)
Q Consensus 82 ~~--~-----------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~ 148 (198)
.. . ..+..+++++.|+.|++||+++ ++.+..+.+|..+|.+++|+|++++|++++.|+.|++||++
T Consensus 158 ~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~ 236 (321)
T 3ow8_A 158 YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ 236 (321)
T ss_dssp EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT
T ss_pred EEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCC-CcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC
Confidence 21 1 2345799999999999999998 68888899999999999999999999999999999999999
Q ss_pred CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+++....+ .+|...|.+++|+|++++|++++.|+.|++||+++++++
T Consensus 237 ~~~~~~~~-~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 237 HANLAGTL-SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp TCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred CcceeEEE-cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 99887776 689999999999999999999999999999999988765
No 6
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.8e-37 Score=237.49 Aligned_cols=194 Identities=18% Similarity=0.272 Sum_probs=164.3
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC---ccEEEEeccCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED---FNLYSYDIRQL 78 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d---~~i~~~d~~~~ 78 (198)
..|++++|+|+|++||+|+.|+.|+|||+.+++.........|...|.+++|+|+++.+++++..+ +.|++||....
T Consensus 60 ~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~ 139 (611)
T 1nr0_A 60 HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTS 139 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCB
T ss_pred CceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCC
Confidence 469999999999999999999999999997654332222223678899999999999998876432 58999997665
Q ss_pred CCccccccC------------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758 79 NSPLNVHKD------------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL 146 (198)
Q Consensus 79 ~~~~~~~~~------------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d 146 (198)
...+.+|.. ..+++++.|++|++||.++ .+....+.+|...|.+++|+|+|++|++++.|++|++||
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd 218 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYN 218 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT-BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC-CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEE
Confidence 555555532 3599999999999999887 677788899999999999999999999999999999999
Q ss_pred cCCCceeeEEec------cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 147 AHQGHSRDIYHT------KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 147 ~~~~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+.+++....+.. +|...|.+++|+|++++|++++.|++|++||+++++++
T Consensus 219 ~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~ 274 (611)
T 1nr0_A 219 GVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVE 274 (611)
T ss_dssp TTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCcee
Confidence 999988776533 79999999999999999999999999999999988754
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=221.34 Aligned_cols=191 Identities=21% Similarity=0.220 Sum_probs=155.9
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeee--eeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIR--KVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
..|.+++|+|++ .+++++.||.|+|||+.+++...... ...|...|.+++|+|+++++++ |+.|+.|++||+++..
T Consensus 83 ~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~s-gs~d~~i~iwd~~~~~ 160 (344)
T 4gqb_B 83 AGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVS-GSKDICIKVWDLAQQV 160 (344)
T ss_dssp SCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEE-EETTSCEEEEETTTTE
T ss_pred CCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEE-EeCCCeEEEEECCCCc
Confidence 358999999986 57789999999999999887654443 2347889999999999999876 5799999999998654
Q ss_pred C--cccccc------------CceEEEecCCCcEEEEEccCCCcceeeec--CCCcceEEEEEccC-CCEEEEeecCCcE
Q psy8758 80 S--PLNVHK------------DMTSAAANEDFNLYSYDIRQLNSPLNVHK--DMTSAVTSVDYSPT-GREFVAGGYDKSL 142 (198)
Q Consensus 80 ~--~~~~~~------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~sp~-~~~l~~~~~d~~v 142 (198)
. .+..|. ..++++++.|++|++||+++ .++...+. .+...+.+++|+|+ +++|++++.|+.|
T Consensus 161 ~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v 239 (344)
T 4gqb_B 161 VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC-PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTV 239 (344)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS-SSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEE
T ss_pred EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccc-cceeeeeecceeeccceeeeecCCCCcceEEeccCCcE
Confidence 2 233332 24689999999999999998 56666653 35567899999995 5688999999999
Q ss_pred EEEEcCCCceeeEEeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEecCCCccc
Q psy8758 143 RLYLAHQGHSRDIYHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 143 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
++||+++++++..+ .+|...|++++|+|++ ++|++++.|++|++||+++++++
T Consensus 240 ~~wd~~~~~~~~~~-~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 240 SLVDTKSTSCVLSS-AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF 293 (344)
T ss_dssp EEEESCC--CCEEE-ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE
T ss_pred EEEECCCCcEEEEE-cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence 99999999988877 6899999999999998 57999999999999999998764
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9e-37 Score=216.44 Aligned_cols=191 Identities=16% Similarity=0.277 Sum_probs=162.2
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS- 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~- 80 (198)
.+|.+++|+|++++|++|+.|+.|++||+.+++....+.. |...|.+++|+|+++++++ |+.|+.|++||+++...
T Consensus 56 ~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s-gs~D~~v~lWd~~~~~~~ 132 (304)
T 2ynn_A 56 TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA--HPDYIRSIAVHPTKPYVLS-GSDDLTVKLWNWENNWAL 132 (304)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECSSSSEEEE-EETTSCEEEEEGGGTTEE
T ss_pred CcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeC--CCCcEEEEEEcCCCCEEEE-ECCCCeEEEEECCCCcch
Confidence 4689999999999999999999999999999887666654 5788999999999998876 57999999999876421
Q ss_pred --ccccc------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc--CCCEEEEeecCCcEEE
Q psy8758 81 --PLNVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP--TGREFVAGGYDKSLRL 144 (198)
Q Consensus 81 --~~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp--~~~~l~~~~~d~~v~v 144 (198)
.+..| ....+++++.|++|++||+++..........+...+..++|+| ++++|++++.|+.|++
T Consensus 133 ~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~i 212 (304)
T 2ynn_A 133 EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKI 212 (304)
T ss_dssp EEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEE
T ss_pred hhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEE
Confidence 22222 2357999999999999999874333334445668899999987 6789999999999999
Q ss_pred EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
||+++++++..+ .+|...|..++|+|++++|++++.||.|++||+++++.+
T Consensus 213 Wd~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 213 WDYQTKSCVATL-EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (304)
T ss_dssp EETTTTEEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE
T ss_pred EeCCCCccceee-CCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 999999988877 689999999999999999999999999999999988764
No 9
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=215.05 Aligned_cols=184 Identities=14% Similarity=0.217 Sum_probs=161.1
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-- 80 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-- 80 (198)
.+.+++|+|++++|++++.|+.+++|++.+++....+.. +...+.+++|+|+++++++ ++.|+.|++||+++...
T Consensus 124 ~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~--~~~~v~~~~~spdg~~las-g~~dg~i~iwd~~~~~~~~ 200 (321)
T 3ow8_A 124 DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT--RGKFILSIAYSPDGKYLAS-GAIDGIINIFDIATGKLLH 200 (321)
T ss_dssp CCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEEC--SSSCEEEEEECTTSSEEEE-EETTSCEEEEETTTTEEEE
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecC--CCceEEEEEECCCCCEEEE-EcCCCeEEEEECCCCcEEE
Confidence 577899999999999999999999999998876555543 4667999999999999876 56999999999976542
Q ss_pred ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758 81 PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ 149 (198)
Q Consensus 81 ~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~ 149 (198)
.+..| .+..+++++.|+.|++||++. ......+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 201 ~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 201 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH-ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp EECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC-cceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 22222 235799999999999999998 677888899999999999999999999999999999999999
Q ss_pred CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758 150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
++++..+ .+|...|.+++|+|++++|++++.||.|++||+.
T Consensus 280 ~~~~~~~-~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 280 RTCVHTF-FDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp TEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CEEEEEE-cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9988877 6788999999999999999999999999999974
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=7.8e-36 Score=212.12 Aligned_cols=191 Identities=18% Similarity=0.318 Sum_probs=166.8
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS- 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~- 80 (198)
++|++++|+|++++|++++.||.|++|++.+++....+.. |...|.+++|+|+++.++++ +.|+.|++||+++...
T Consensus 24 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~-~~d~~i~vwd~~~~~~~ 100 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG--HKLGISDVAWSSDSNLLVSA-SDDKTLKIWDVSSGKCL 100 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEE
T ss_pred CcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhcc--CCCceEEEEEcCCCCEEEEE-CCCCEEEEEECCCCcEE
Confidence 5799999999999999999999999999988876665543 57789999999999988764 6899999999986542
Q ss_pred -ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758 81 -PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH 148 (198)
Q Consensus 81 -~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~ 148 (198)
.+..| .+..+++++.|+.|++||+++ .+.+..+..|..++.+++|+|++++|++++.|+.|++||++
T Consensus 101 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~ 179 (312)
T 4ery_A 101 KTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTA 179 (312)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 22223 235789999999999999998 67888888999999999999999999999999999999999
Q ss_pred CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+++.+..+...+...+..++|+|++++|++++.||.|++||+++++.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 227 (312)
T 4ery_A 180 SGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCL 227 (312)
T ss_dssp TCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEE
T ss_pred CCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE
Confidence 998887776667788999999999999999999999999999988754
No 11
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.9e-36 Score=221.90 Aligned_cols=190 Identities=16% Similarity=0.310 Sum_probs=166.7
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS- 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~- 80 (198)
+.|.+++|+|++++|++|+.|+.|++||+.+++....+.. |...|.+++|+|++..+++ ++.|+.|++||+++...
T Consensus 151 ~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~--h~~~V~~v~~~p~~~~l~s-~s~D~~i~~wd~~~~~~~ 227 (410)
T 1vyh_C 151 DSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG--HDHNVSSVSIMPNGDHIVS-ASRDKTIKMWEVQTGYCV 227 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCC--CSSCEEEEEECSSSSEEEE-EETTSEEEEEETTTCCEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcC--CCCCEEEEEEeCCCCEEEE-EeCCCeEEEEECCCCcEE
Confidence 5799999999999999999999999999988876666654 5778999999999998876 56999999999986542
Q ss_pred -ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC-------------------
Q psy8758 81 -PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT------------------- 129 (198)
Q Consensus 81 -~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~------------------- 129 (198)
.+..| .+..+++++.|+.|++||+++ ......+..|...+.+++|+|+
T Consensus 228 ~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (410)
T 1vyh_C 228 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGK 306 (410)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC------
T ss_pred EEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCC-CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCC
Confidence 23333 235699999999999999998 6778888899999999999996
Q ss_pred -CCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 130 -GREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 130 -~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+.+|++++.|+.|++||++++.++..+ .+|...|.+++|+|++++|++++.||.|++||+++++++
T Consensus 307 ~g~~l~sgs~D~~i~iwd~~~~~~~~~~-~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~ 373 (410)
T 1vyh_C 307 PGPFLLSGSRDKTIKMWDVSTGMCLMTL-VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM 373 (410)
T ss_dssp -CCEEEEEETTSEEEEEETTTTEEEEEE-ECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC
T ss_pred CCCEEEEEeCCCeEEEEECCCCceEEEE-ECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 678999999999999999999988777 688899999999999999999999999999999988764
No 12
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.3e-36 Score=220.45 Aligned_cols=190 Identities=18% Similarity=0.268 Sum_probs=160.6
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-- 79 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-- 79 (198)
++|++++|+|++++|++|+.|++|++||+.+++....+.. |...|.+++|+|+++.+++ |+.|+.+++||+....
T Consensus 67 ~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~--h~~~v~~~~~s~~g~~las-~~~d~~v~iw~~~~~~~~ 143 (380)
T 3iz6_a 67 GKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL--HCPWVMECAFAPNGQSVAC-GGLDSACSIFNLSSQADR 143 (380)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC--CCTTCCCCEECTTSSEEEE-CCSSSCCEEEECCCCSSC
T ss_pred cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEec--CCCCEEEEEECCCCCEEEE-eeCCCcEEEEECCCCccc
Confidence 5799999999999999999999999999998876666654 5778999999999998876 5799999999986421
Q ss_pred -------Ccccccc------------CceEEEecCCCcEEEEEccCCCcceeee-----cCCCcceEEEEEcc-CCCEEE
Q psy8758 80 -------SPLNVHK------------DMTSAAANEDFNLYSYDIRQLNSPLNVH-----KDMTSAVTSVDYSP-TGREFV 134 (198)
Q Consensus 80 -------~~~~~~~------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~-----~~~~~~i~~~~~sp-~~~~l~ 134 (198)
..+.+|. +..+++++.|++|++||+++ ++.+..+ .+|...+.+++|+| ++++|+
T Consensus 144 ~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~-~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 222 (380)
T 3iz6_a 144 DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTT-GQRISIFGSEFPSGHTADVLSLSINSLNANMFI 222 (380)
T ss_dssp CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTT-CCEEEEECCCSSSSCCSCEEEEEECSSSCCEEE
T ss_pred cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCC-CcEEEEeecccCCCCccCeEEEEeecCCCCEEE
Confidence 1233332 34699999999999999998 5666555 56888999999987 789999
Q ss_pred EeecCCcEEEEEcCCC-ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 135 AGGYDKSLRLYLAHQG-HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 135 ~~~~d~~v~v~d~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+++.|+.|++||++.. +....+ .+|...|.+++|+|++++|++++.||+|++||+++++.+
T Consensus 223 sgs~D~~v~~wd~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 223 SGSCDTTVRLWDLRITSRAVRTY-HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp EEETTSCEEEEETTTTCCCCEEE-CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEE
T ss_pred EEECCCeEEEEECCCCCcceEEE-CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEE
Confidence 9999999999999854 555554 789999999999999999999999999999999988754
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=7.1e-36 Score=213.16 Aligned_cols=188 Identities=17% Similarity=0.259 Sum_probs=155.0
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-C
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-S 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-~ 80 (198)
+.|.+++|+|+++++++++.|+.|++||+.+++....+.. |...|.+++|+|++..+++ ++.|+.|++||++... .
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s-~s~D~~i~vwd~~~~~~~ 142 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVG--HKSDVMSVDIDKKASMIIS-GSRDKTIKVWTIKGQCLA 142 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECTTSCEEEE-EETTSCEEEEETTSCEEE
T ss_pred ccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEcc--CCCcEEEEEEcCCCCEEEE-EeCCCeEEEEECCCCeEE
Confidence 4689999999999999999999999999999887666654 5788999999999998876 5799999999986432 1
Q ss_pred ccccc-----------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEE
Q psy8758 81 PLNVH-----------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLR 143 (198)
Q Consensus 81 ~~~~~-----------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~ 143 (198)
.+..| ....+++++.|+.|++||+++ .+....+.+|...|.+++|+|++++|++++.|+.|+
T Consensus 143 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~ 221 (319)
T 3frx_A 143 TLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ-FQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIM 221 (319)
T ss_dssp EECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTT-TEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEE
T ss_pred EEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc-chhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 11122 123689999999999999998 677788889999999999999999999999999999
Q ss_pred EEEcCCCceeeEEec-----------------------------------------------cCcccEEEEEEcCCCCEE
Q psy8758 144 LYLAHQGHSRDIYHT-----------------------------------------------KRMQHVTHTVWSLDNKFV 176 (198)
Q Consensus 144 v~d~~~~~~~~~~~~-----------------------------------------------~~~~~v~~~~~s~~~~~l 176 (198)
+||+.+++.+..+.. .|...+.+++|+|||++|
T Consensus 222 iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l 301 (319)
T 3frx_A 222 LWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTL 301 (319)
T ss_dssp EEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEE
T ss_pred EEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEE
Confidence 999987665433210 123457788999999999
Q ss_pred EEecCCCeEEEEecCCC
Q psy8758 177 ISASDEMNLRVWKAHAS 193 (198)
Q Consensus 177 ~~~~~dg~v~~w~~~~~ 193 (198)
++++.||.|++||+.++
T Consensus 302 ~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 302 FAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEETTSCEEEEEEEEC
T ss_pred EEeecCceEEEEEEeec
Confidence 99999999999998775
No 14
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.8e-36 Score=219.95 Aligned_cols=190 Identities=13% Similarity=0.283 Sum_probs=167.0
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS- 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~- 80 (198)
++|++++|+|+++++++|+.||.|++||+.+++....+.. |...|.+++|+|+++.+++ |+.|+.|++||+.+...
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~--h~~~V~~v~~~~~~~~l~s-gs~D~~i~iwd~~~~~~~ 185 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKG--HTDSVQDISFDHSGKLLAS-CSADMTIKLWDFQGFECI 185 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECC--CSSCEEEEEECTTSSEEEE-EETTSCCCEEETTSSCEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEec--cCCcEEEEEEcCCCCEEEE-EeCCCeEEEEeCCCCcee
Confidence 5799999999999999999999999999999887666654 5788999999999998776 57999999999976442
Q ss_pred -cccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758 81 -PLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH 148 (198)
Q Consensus 81 -~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~ 148 (198)
.+..|. +..+++++.|+.|++||+++ +.++..+.+|...+.+++++|++++|++++.|+.|++||+.
T Consensus 186 ~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~ 264 (410)
T 1vyh_C 186 RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVA 264 (410)
T ss_dssp ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCC-CcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 233332 35689999999999999998 68888999999999999999999999999999999999999
Q ss_pred CCceeeEEeccCcccEEEEEEcCC--------------------CCEEEEecCCCeEEEEecCCCccc
Q psy8758 149 QGHSRDIYHTKRMQHVTHTVWSLD--------------------NKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 149 ~~~~~~~~~~~~~~~v~~~~~s~~--------------------~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+++....+ .+|...|.+++|+|+ +.+|++++.|+.|++||+++++++
T Consensus 265 ~~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 265 TKECKAEL-REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331 (410)
T ss_dssp TCCEEEEE-CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred CCceeeEe-cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 99888776 688899999999996 678999999999999999988764
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.7e-35 Score=214.04 Aligned_cols=189 Identities=19% Similarity=0.303 Sum_probs=163.2
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-- 79 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-- 79 (198)
++|++++|+|++++|++++.||.|++||..+++....+.. +...|.+++|+|++..+++ ++.|+.+++|++....
T Consensus 65 ~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~--~~~~v~~~~~sp~g~~las-g~~d~~i~v~~~~~~~~~ 141 (354)
T 2pbi_B 65 NKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTM--PCTWVMACAYAPSGCAIAC-GGLDNKCSVYPLTFDKNE 141 (354)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC--SSSCCCEEEECTTSSEEEE-ESTTSEEEEEECCCCTTC
T ss_pred CeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEec--CCCCEEEEEECCCCCEEEE-eeCCCCEEEEEEeccccc
Confidence 5799999999999999999999999999988876555543 4667999999999998876 5799999999986432
Q ss_pred ------Ccccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc--CCCEEEEeecCC
Q psy8758 80 ------SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP--TGREFVAGGYDK 140 (198)
Q Consensus 80 ------~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp--~~~~l~~~~~d~ 140 (198)
..+..|. +..+++++.|++|++||+++ ++.+..+.+|...+.+++|+| ++++|++++.|+
T Consensus 142 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg 220 (354)
T 2pbi_B 142 NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVES-GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDK 220 (354)
T ss_dssp CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTS
T ss_pred cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCC-CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCC
Confidence 1122232 34689999999999999998 788889999999999999988 478999999999
Q ss_pred cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
.|++||+++++++..+ .+|...|.+++|+|++++|++++.|+.|++||+++++.
T Consensus 221 ~v~~wd~~~~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 221 KAMVWDMRSGQCVQAF-ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADRE 274 (354)
T ss_dssp CEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred eEEEEECCCCcEEEEe-cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 9999999999988776 68889999999999999999999999999999987754
No 16
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1e-36 Score=225.89 Aligned_cols=191 Identities=14% Similarity=0.179 Sum_probs=157.6
Q ss_pred cceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC-CCeEEEEecCCccEEEEeccCCC
Q psy8758 2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM-EAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
..|++++|+| ++++||+|+.||.|+|||+.+++....+....|...|.+++|+|. +..|+ +++.|++|++||++...
T Consensus 120 ~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~-s~s~D~~v~iwd~~~~~ 198 (435)
T 4e54_B 120 RRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFY-ASSMEGTTRLQDFKGNI 198 (435)
T ss_dssp SCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEE-EECSSSCEEEEETTSCE
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEE-EEeCCCEEEEeeccCCc
Confidence 3599999999 567999999999999999987765555554557889999999995 55555 56799999999987542
Q ss_pred Cc--------------ccc-ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC-EEEEeecCCcEE
Q psy8758 80 SP--------------LNV-HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLR 143 (198)
Q Consensus 80 ~~--------------~~~-~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~d~~v~ 143 (198)
.. +.. ..+.++++++.|+.|++||++. +.+..+..|...|.+++|+|+++ ++++++.|+.|+
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~--~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~ 276 (435)
T 4e54_B 199 LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG--KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVK 276 (435)
T ss_dssp EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS--CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc--ceeEEEecccceEEeeeecCCCceEEEEecCcceee
Confidence 11 111 2345799999999999999974 66778889999999999999986 788999999999
Q ss_pred EEEcCCCceeeEE--eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 144 LYLAHQGHSRDIY--HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 144 v~d~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
+||+++.+....+ ..+|...|.+++|+|+|++|++++.||.|++||+.+++.
T Consensus 277 iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~ 330 (435)
T 4e54_B 277 IWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDC 330 (435)
T ss_dssp EEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSS
T ss_pred EEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCcc
Confidence 9999886654332 357889999999999999999999999999999998764
No 17
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=213.15 Aligned_cols=188 Identities=15% Similarity=0.282 Sum_probs=155.5
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeee-eeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIR-KVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-- 79 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-- 79 (198)
.|.+++|+|+|++|++++.|+.|+|||+.++....... ...|...|.+++|+|+++++++ ++.|+.+++|+.....
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s-~s~D~~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLAS-ASFDATTCIWKKNQDDFE 96 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEE-EETTSCEEEEEECCC-EE
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEE-EECCCcEEEEEccCCCeE
Confidence 68999999999999999999999999998765332221 2236788999999999998876 5699999999987542
Q ss_pred --Ccccccc-----------CceEEEecCCCcEEEEEccCCC--cceeeecCCCcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758 80 --SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLN--SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 144 (198)
Q Consensus 80 --~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v 144 (198)
..+..|. +..+++++.|+.|++||++... ..+..+..|...|.+++|+|++++|++++.|+.|++
T Consensus 97 ~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~ 176 (345)
T 3fm0_A 97 CVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKL 176 (345)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEE
T ss_pred EEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEE
Confidence 2233333 3579999999999999998632 235667789999999999999999999999999999
Q ss_pred EEcCCCceee-EEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758 145 YLAHQGHSRD-IYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 145 ~d~~~~~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
||.+++.... ....+|...|.+++|+|+|++|++++.|++|++|+..
T Consensus 177 w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 177 YREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 9998876432 2236899999999999999999999999999999974
No 18
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.7e-35 Score=213.79 Aligned_cols=185 Identities=15% Similarity=0.034 Sum_probs=148.0
Q ss_pred ceeEEEECCCCceEEEe--eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758 3 HVTHTVWSLDNKFVISA--SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS 80 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~--~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~ 80 (198)
.+.+++|||||++++++ +.|+.|+|||+.+++....+ .+...|.+++|+|++++++++ + ++.+.+|+..+...
T Consensus 135 ~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~---~~~~~V~~v~fspdg~~l~s~-s-~~~~~~~~~~~~~~ 209 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI---ETRGEVKDLHFSTDGKVVAYI-T-GSSLEVISTVTGSC 209 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE---ECSSCCCEEEECTTSSEEEEE-C-SSCEEEEETTTCCE
T ss_pred CEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe---CCCCceEEEEEccCCceEEec-c-ceeEEEEEeccCcc
Confidence 37789999999987654 47899999999988765554 356789999999999998764 4 55666666654332
Q ss_pred c----cccc-----------cCceEEEecCCC----cEEEEEccCCCc---ceeeecCCCcceEEEEEccCCCEEEEeec
Q psy8758 81 P----LNVH-----------KDMTSAAANEDF----NLYSYDIRQLNS---PLNVHKDMTSAVTSVDYSPTGREFVAGGY 138 (198)
Q Consensus 81 ~----~~~~-----------~~~~~~~~~~~~----~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~sp~~~~l~~~~~ 138 (198)
. ...| .+..+++++.++ .++.|++..... ....+..|...|++++|+|+|++||+|+.
T Consensus 210 ~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 210 IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence 1 1112 234567776665 578898876322 23456788999999999999999999999
Q ss_pred CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758 139 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 192 (198)
Q Consensus 139 d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~ 192 (198)
|++|+|||+++++++..+..+|...|++++|+|||++||+++.|++|+||++..
T Consensus 290 D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 290 DNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 999999999999998887788999999999999999999999999999999964
No 19
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.1e-35 Score=209.24 Aligned_cols=192 Identities=19% Similarity=0.233 Sum_probs=150.0
Q ss_pred cceeEEEECCC-CceEEEeeCCCeEEEEEccCCceee--eeeee-eecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSLD-NKFVISASDEMNLRVWKAHASEKLG--PIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~-~~~l~~~~~d~~i~i~~~~~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~ 77 (198)
+.|++++|+|+ +++|++|+.|++|++||+.+.+... ..... .|...|.+++|+|++++++++ +.|+.|++|+...
T Consensus 39 ~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~-~~d~~i~~~~~~~ 117 (340)
T 4aow_A 39 GWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG-SWDGTLRLWDLTT 117 (340)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTT
T ss_pred CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE-cccccceEEeecc
Confidence 57999999997 6899999999999999997654322 12222 267889999999999988764 6899999988753
Q ss_pred CCCc---------------------------------------------cccc-------------cCceEEEecCCCcE
Q psy8758 78 LNSP---------------------------------------------LNVH-------------KDMTSAAANEDFNL 99 (198)
Q Consensus 78 ~~~~---------------------------------------------~~~~-------------~~~~~~~~~~~~~i 99 (198)
.... ...| ...++++++.|+.|
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i 197 (340)
T 4aow_A 118 GTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLV 197 (340)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCE
T ss_pred cceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEE
Confidence 2210 0001 11247788999999
Q ss_pred EEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe----------------------
Q psy8758 100 YSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH---------------------- 157 (198)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~---------------------- 157 (198)
++||+++ .+.+..+.+|...|++++|+|++++|++++.|+.|++||+++.+.+..+.
T Consensus 198 ~i~d~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d 276 (340)
T 4aow_A 198 KVWNLAN-CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATG 276 (340)
T ss_dssp EEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEET
T ss_pred EEEECCC-CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCC
Confidence 9999998 67888888999999999999999999999999999999988654332220
Q ss_pred --------------------------ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 158 --------------------------TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 158 --------------------------~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
.+|...|++++|+|+|++|++++.||.|++||+++|++
T Consensus 277 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 277 PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGTR 340 (340)
T ss_dssp TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC---
T ss_pred CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcCC
Confidence 13566799999999999999999999999999999863
No 20
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.4e-35 Score=214.53 Aligned_cols=189 Identities=15% Similarity=0.268 Sum_probs=157.0
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL 82 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 82 (198)
.|.+++|+|+|++|++++.|+.|++||+.+++....+.. |...|.+++|+|+++.+++ ++.|+.|++||+++.....
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~--h~~~v~~~~~~p~~~~l~s-~s~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG--HEQDIYSLDYFPSGDKLVS-GSGDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECTTSSEEEE-EETTSEEEEEETTTTEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc--CCCCEEEEEEcCCCCEEEE-ecCCCcEEEEECCCCeeEE
Confidence 388999999999999999999999999998876655544 5778999999999998876 5699999999998654211
Q ss_pred -------------ccccCceEEEecCCCcEEEEEccCCCcceeee-------cCCCcceEEEEEccCCCEEEEeecCCcE
Q psy8758 83 -------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH-------KDMTSAVTSVDYSPTGREFVAGGYDKSL 142 (198)
Q Consensus 83 -------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-------~~~~~~i~~~~~sp~~~~l~~~~~d~~v 142 (198)
....+..+++++.|+.|++||+++ +..+..+ .+|...|.+++|+|++++|++++.|+.|
T Consensus 202 ~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v 280 (393)
T 1erj_A 202 TLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSV 280 (393)
T ss_dssp EEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEE
Confidence 112456899999999999999987 5555554 5688999999999999999999999999
Q ss_pred EEEEcCCCc------------eeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 143 RLYLAHQGH------------SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 143 ~v~d~~~~~------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
++||+++.. +... ..+|...|.+++|+|++++|++++.|+.|++||+++++.+
T Consensus 281 ~~wd~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~ 345 (393)
T 1erj_A 281 KLWNLQNANNKSDSKTPNSGTCEVT-YIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPL 345 (393)
T ss_dssp EEEEC---------------CEEEE-EECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEECCCCCCcccccCCCCCcceEE-EecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEE
Confidence 999997643 2222 3578899999999999999999999999999999988764
No 21
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.5e-34 Score=204.46 Aligned_cols=188 Identities=13% Similarity=0.234 Sum_probs=151.8
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCC--ceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS--EKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~ 77 (198)
+.|++++|+|+|++|++|+.|+.|++||+... +....+.. |...|.+++|+|+ ++.+++ ++.|++|++||+++
T Consensus 10 ~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~g--H~~~V~~v~~s~~~~g~~l~s-~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 10 EMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTG--HEGPVWRVDWAHPKFGTILAS-CSYDGKVMIWKEEN 86 (297)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECC--CSSCEEEEEECCGGGCSEEEE-EETTTEEEEEEBSS
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEcc--ccCCeEEEEecCCCcCCEEEE-EcCCCEEEEEEcCC
Confidence 57999999999999999999999999999753 33334433 6888999999864 666655 67999999999976
Q ss_pred CC--C--ccccc----------c---CceEEEecCCCcEEEEEccCCCc-ceeeecCCCcceEEEEEccC----------
Q psy8758 78 LN--S--PLNVH----------K---DMTSAAANEDFNLYSYDIRQLNS-PLNVHKDMTSAVTSVDYSPT---------- 129 (198)
Q Consensus 78 ~~--~--~~~~~----------~---~~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~sp~---------- 129 (198)
.. . .+..| + +..+++++.|+.|++||++.... ....+.+|...+.+++|+|+
T Consensus 87 ~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~ 166 (297)
T 2pm7_B 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 166 (297)
T ss_dssp SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---------
T ss_pred CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCC
Confidence 42 1 11222 1 45799999999999999987322 24566789999999999997
Q ss_pred ---CCEEEEeecCCcEEEEEcCCCc----eeeEEeccCcccEEEEEEcCCC---CEEEEecCCCeEEEEecCCC
Q psy8758 130 ---GREFVAGGYDKSLRLYLAHQGH----SRDIYHTKRMQHVTHTVWSLDN---KFVISASDEMNLRVWKAHAS 193 (198)
Q Consensus 130 ---~~~l~~~~~d~~v~v~d~~~~~----~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~v~~w~~~~~ 193 (198)
+++|++++.|+.|++||+++++ ....+ .+|...|.+++|+|++ ++|++++.|++|++||++++
T Consensus 167 ~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l-~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 167 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp ---CCEEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred CCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe-cCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 5799999999999999998865 33333 6899999999999985 79999999999999999864
No 22
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.1e-34 Score=205.57 Aligned_cols=191 Identities=18% Similarity=0.227 Sum_probs=159.9
Q ss_pred cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCce--eeeeeee-eecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEK--LGPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~--~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~ 77 (198)
++|++++|+|++ ++|++++.|++|++|++..... ...+..+ .|...|.+++|+|+++++++ ++.|+.|++||+++
T Consensus 18 ~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s-~s~D~~v~~wd~~~ 96 (319)
T 3frx_A 18 GWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALS-ASWDKTLRLWDVAT 96 (319)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEE-EETTSEEEEEETTT
T ss_pred ceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEE-EeCCCEEEEEECCC
Confidence 579999999965 8999999999999999864321 1222222 26788999999999999877 46999999999986
Q ss_pred CCC--cccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC------CCEEEEeec
Q psy8758 78 LNS--PLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT------GREFVAGGY 138 (198)
Q Consensus 78 ~~~--~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~------~~~l~~~~~ 138 (198)
... .+..|. +..+++++.|++|++||++. ..+..+.+|...+.+++|+|. +..+++++.
T Consensus 97 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~ 174 (319)
T 3frx_A 97 GETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG--QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGN 174 (319)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS--CEEEEECCCSSCEEEEEECCC------CCEEEEEET
T ss_pred CCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC--CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeC
Confidence 542 233343 34689999999999999974 677888899999999999995 448999999
Q ss_pred CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 139 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 139 d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
|+.|++||+++.+....+ .+|...|.+++|+|++++|++++.||.|++||+.+++.+
T Consensus 175 d~~i~~wd~~~~~~~~~~-~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~ 231 (319)
T 3frx_A 175 DKMVKAWNLNQFQIEADF-IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAM 231 (319)
T ss_dssp TSCEEEEETTTTEEEEEE-CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred CCEEEEEECCcchhheee-cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 999999999998877766 689999999999999999999999999999999988764
No 23
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=4.2e-34 Score=205.64 Aligned_cols=192 Identities=15% Similarity=0.219 Sum_probs=157.9
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCcee-eeeee-eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL-GPIRK-VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~-~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
..|.+++|+|+++++++++.|+.+++|++.+++.. ..... ..|...+.++.|+|++. +++ ++.|+.|++||+++..
T Consensus 98 ~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s-~s~d~~i~~wd~~~~~ 175 (340)
T 1got_B 98 SWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVT-SSGDTTCALWDIETGQ 175 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEE-EETTSCEEEEETTTTE
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEE-EECCCcEEEEECCCCc
Confidence 35889999999999999999999999999865421 11111 23678899999998875 444 5789999999997654
Q ss_pred C--cccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758 80 S--PLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL 146 (198)
Q Consensus 80 ~--~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d 146 (198)
. .+..|. +..+++++.|+.|++||+++ +.....+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 176 ~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd 254 (340)
T 1got_B 176 QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE-GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFD 254 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC-CeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEE
Confidence 2 223332 34689999999999999998 678888999999999999999999999999999999999
Q ss_pred cCCCceeeEEe-ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 147 AHQGHSRDIYH-TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 147 ~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+++++.+..+. ..+...|.+++|+|+|++|++++.||.|++||+.+++.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~ 305 (340)
T 1got_B 255 LRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRA 305 (340)
T ss_dssp TTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEe
Confidence 99988776652 223357999999999999999999999999999887654
No 24
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-35 Score=216.88 Aligned_cols=193 Identities=14% Similarity=0.168 Sum_probs=161.1
Q ss_pred cceeEEEECC-CCceEEEeeCCCeEEEEEccC---CceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc-
Q psy8758 2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHA---SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR- 76 (198)
Q Consensus 2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~- 76 (198)
++|++++|+| ++++|++|+.||.|++||+.+ +..........|...|.+++|+|++..+++ ++.|+.|++||+.
T Consensus 64 ~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s-~s~dg~i~vwd~~~ 142 (437)
T 3gre_A 64 NSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAV-SSKDGQIIVLKVNH 142 (437)
T ss_dssp SCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEE-EETTSEEEEEEEEE
T ss_pred CceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEE-EeCCCEEEEEEecc
Confidence 5799999999 999999999999999999976 443333333357889999999999988876 4699999999985
Q ss_pred --CCCC----------cccc-----------------ccCceEEEecCCCcEEEEEccCCCcceeeecC--CCcceEEEE
Q psy8758 77 --QLNS----------PLNV-----------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD--MTSAVTSVD 125 (198)
Q Consensus 77 --~~~~----------~~~~-----------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~ 125 (198)
.... .+.. ..+..+++++.|+.|++||+++ .+++..+.. |...|++++
T Consensus 143 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~h~~~v~~~~ 221 (437)
T 3gre_A 143 YQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRT-LERLQIIENSPRHGAVSSIC 221 (437)
T ss_dssp EEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTT-CCEEEEEECCGGGCCEEEEE
T ss_pred ccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-CeeeEEEccCCCCCceEEEE
Confidence 2110 1111 2256899999999999999998 677888877 889999999
Q ss_pred EccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEc----CCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 126 YSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWS----LDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 126 ~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s----~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
|+|++++|++++.|+.|++||+++++.+..+...|...|.+++|+ |++++|++++.||.|++||+++++++
T Consensus 222 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 296 (437)
T 3gre_A 222 IDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQ 296 (437)
T ss_dssp ECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEE
Confidence 999999999999999999999999998887755777899999665 46789999999999999999988753
No 25
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=5.1e-34 Score=201.68 Aligned_cols=189 Identities=15% Similarity=0.229 Sum_probs=149.9
Q ss_pred cceeEEEECCC--CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSLD--NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~ 77 (198)
++|.+++|+|+ +++|++++.|++|++||+.+++.........|...|.+++|+|+ +..+++ ++.|+.|++||++.
T Consensus 54 ~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s-~s~d~~v~~wd~~~ 132 (297)
T 2pm7_B 54 GPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLV-ASSDGKVSVVEFKE 132 (297)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEE-EETTSEEEEEEBCS
T ss_pred CCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEE-EECCCcEEEEEecC
Confidence 57999999874 89999999999999999987642222222236778999999997 666665 57999999999976
Q ss_pred CCC----cccccc------------------------CceEEEecCCCcEEEEEccCCCc---ceeeecCCCcceEEEEE
Q psy8758 78 LNS----PLNVHK------------------------DMTSAAANEDFNLYSYDIRQLNS---PLNVHKDMTSAVTSVDY 126 (198)
Q Consensus 78 ~~~----~~~~~~------------------------~~~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~ 126 (198)
... .+..|. ...+++++.|+.|++||++.... ....+.+|...|.+++|
T Consensus 133 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~ 212 (297)
T 2pm7_B 133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (297)
T ss_dssp SSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE
Confidence 421 122221 24799999999999999987322 45677889999999999
Q ss_pred ccCC---CEEEEeecCCcEEEEEcCCCce--eeEEe--ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758 127 SPTG---REFVAGGYDKSLRLYLAHQGHS--RDIYH--TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 127 sp~~---~~l~~~~~d~~v~v~d~~~~~~--~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
+|++ ++|++++.|++|++||++.... ..... ..|...|.+++|+|++++|++++.||.|++|+..
T Consensus 213 sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 213 SPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 9995 7999999999999999987532 12221 4567899999999999999999999999999986
No 26
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.8e-34 Score=205.62 Aligned_cols=183 Identities=19% Similarity=0.273 Sum_probs=153.4
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccCCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
+.|.+++|+|+++.|++++.|++|++||+.+++....+.. |...|.+++|+|+ +..+++ |+.|+.|++||+++..
T Consensus 155 ~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~g~~l~s-gs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 155 NYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHG--HGADVLCLDLAPSETGNTFVS-GGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECCCSSCCEEEE-EETTSCEEEEETTTCC
T ss_pred CcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC--CCCCeEEEEEEeCCCCCEEEE-EeCCCeEEEEECCCCc
Confidence 4688999999999999999999999999999887666654 5778999999885 456654 6799999999998654
Q ss_pred C--ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecC--CCcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758 80 S--PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKD--MTSAVTSVDYSPTGREFVAGGYDKSLRL 144 (198)
Q Consensus 80 ~--~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~d~~v~v 144 (198)
. .+..| .+..+++++.|++|++||++. ...+..+.. +...+.+++|+|++++|++++.|+.|++
T Consensus 232 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~v 310 (354)
T 2pbi_B 232 CVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA-DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINV 310 (354)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC-CcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEE
Confidence 2 22223 235799999999999999987 455555443 3347899999999999999999999999
Q ss_pred EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758 145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK 189 (198)
Q Consensus 145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~ 189 (198)
||+.+++.+..+ .+|...|.+++|+|+|++|++++.|+.|++|+
T Consensus 311 wd~~~~~~~~~l-~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 311 WDVLKGSRVSIL-FGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EETTTCSEEEEE-CCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EECCCCceEEEE-ECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999887766 68999999999999999999999999999996
No 27
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.8e-34 Score=204.71 Aligned_cols=189 Identities=13% Similarity=0.162 Sum_probs=149.3
Q ss_pred cceeEEEECC--CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSL--DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~--~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~ 77 (198)
++|.+++|+| ++++|++++.|++|++||+.+++.........|...|.+++|+|+ +..++ +++.|+.|++||++.
T Consensus 58 ~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~la-sgs~D~~i~lwd~~~ 136 (316)
T 3bg1_A 58 GPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILA-CGSSDGAISLLTYTG 136 (316)
T ss_dssp SCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEE-EECSSSCEEEEEECS
T ss_pred ccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEE-EEcCCCCEEEEecCC
Confidence 5799999986 489999999999999999987642222222236788999999998 55555 567999999999875
Q ss_pred CC-----Ccccccc----------------------------CceEEEecCCCcEEEEEccCCC--cceeeecCCCcceE
Q psy8758 78 LN-----SPLNVHK----------------------------DMTSAAANEDFNLYSYDIRQLN--SPLNVHKDMTSAVT 122 (198)
Q Consensus 78 ~~-----~~~~~~~----------------------------~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~i~ 122 (198)
.. ..+..|. ...+++++.|+.|++||++... .++..+.+|...|.
T Consensus 137 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~ 216 (316)
T 3bg1_A 137 EGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVR 216 (316)
T ss_dssp SSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEE
T ss_pred CCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceE
Confidence 42 1112221 2478999999999999997522 35667889999999
Q ss_pred EEEEccCC----CEEEEeecCCcEEEEEcCCC---ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758 123 SVDYSPTG----REFVAGGYDKSLRLYLAHQG---HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 123 ~~~~sp~~----~~l~~~~~d~~v~v~d~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
+++|+|++ ++|++++.|++|++|++.+. .........|...|.+++|+|++++|++++.|+.|++|+..
T Consensus 217 ~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 217 DVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 99999986 78999999999999999863 21112224677899999999999999999999999999986
No 28
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.6e-33 Score=201.79 Aligned_cols=193 Identities=17% Similarity=0.236 Sum_probs=154.1
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCcee-eeeeee-eecCceeeEEeCC--CCCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL-GPIRKV-VMSLRSNMVSWNP--MEAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~-~~~~~~-~~~~~v~~~~~~~--~~~~~~~~~~~d~~i~~~d~~~ 77 (198)
++|++++|+|++++|++++.||.|++||+.++... ...... .|...|.+++|+| ++..+++ ++.|+.|++||++.
T Consensus 12 ~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s-~~~dg~v~vwd~~~ 90 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIAS-ASYDKTVKLWEEDP 90 (351)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEE-EETTSCEEEEEECT
T ss_pred cceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEE-EcCCCeEEEEecCC
Confidence 57999999999999999999999999999866422 122222 3678899999999 5777766 56899999999976
Q ss_pred CCC-----------ccccc----------c---CceEEEecCCCcEEEEEccCCCc------------------------
Q psy8758 78 LNS-----------PLNVH----------K---DMTSAAANEDFNLYSYDIRQLNS------------------------ 109 (198)
Q Consensus 78 ~~~-----------~~~~~----------~---~~~~~~~~~~~~i~~~d~~~~~~------------------------ 109 (198)
... .+..| + +..+++++.|+.|++||+++...
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (351)
T 3f3f_A 91 DQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSD 170 (351)
T ss_dssp TSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCC
T ss_pred CcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccce
Confidence 421 11111 1 45799999999999999875210
Q ss_pred -----------------------------------ceeeecCCCcceEEEEEccCC----CEEEEeecCCcEEEEEcCCC
Q psy8758 110 -----------------------------------PLNVHKDMTSAVTSVDYSPTG----REFVAGGYDKSLRLYLAHQG 150 (198)
Q Consensus 110 -----------------------------------~~~~~~~~~~~i~~~~~sp~~----~~l~~~~~d~~v~v~d~~~~ 150 (198)
.+..+..|...|++++|+|++ ++|++++.|+.|++||++.+
T Consensus 171 ~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 171 FCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp EEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred eEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 134456788899999999998 89999999999999999875
Q ss_pred ----------------------------------------------ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCe
Q psy8758 151 ----------------------------------------------HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMN 184 (198)
Q Consensus 151 ----------------------------------------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 184 (198)
+.+..+ .+|...|++++|+|++++|++++.||.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~~~dg~ 329 (351)
T 3f3f_A 251 LSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEH-DDHNGEVWSVSWNLTGTILSSAGDDGK 329 (351)
T ss_dssp C---------------------------------------CCSEEEEEEEEE-CTTSSCEEEEEECSSSCCEEEEETTSC
T ss_pred cCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEE-ecccccEEEEEEcCCCCEEEEecCCCc
Confidence 233333 578899999999999999999999999
Q ss_pred EEEEecCCCccc
Q psy8758 185 LRVWKAHASEKL 196 (198)
Q Consensus 185 v~~w~~~~~~~~ 196 (198)
|++|++.+++.+
T Consensus 330 v~iw~~~~~~~~ 341 (351)
T 3f3f_A 330 VRLWKATYSNEF 341 (351)
T ss_dssp EEEEEECTTSCE
T ss_pred EEEEecCcCcch
Confidence 999999988654
No 29
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.5e-34 Score=207.33 Aligned_cols=191 Identities=22% Similarity=0.272 Sum_probs=149.5
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeee--eeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGP--IRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
..|.+++|+|+++++ +++.||.|++||+.+++.... +....|...|.+++|+|+++.+++ ++.|+.|++||+++..
T Consensus 95 ~~V~~~~~s~d~~~l-~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s-gs~dg~v~iwd~~~~~ 172 (357)
T 4g56_B 95 AGVTDVAWVSEKGIL-VASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVS-GGKDFSVKVWDLSQKA 172 (357)
T ss_dssp SCEEEEEEETTTEEE-EEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEE-EETTSCEEEEETTTTE
T ss_pred CCEEEEEEcCCCCEE-EEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEE-EeCCCeEEEEECCCCc
Confidence 358999999998755 577899999999988764432 233347888999999999999876 5699999999998654
Q ss_pred C--ccccc------------cCceEEEecCCCcEEEEEccCCCcceeee--cCCCcceEEEEEccCC-CEEEEeecCCcE
Q psy8758 80 S--PLNVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTG-REFVAGGYDKSL 142 (198)
Q Consensus 80 ~--~~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~sp~~-~~l~~~~~d~~v 142 (198)
. .+..| .+.++++++.|+.|++||+++ .++...+ ..+...+.+++|+|++ .+|++++.|+.|
T Consensus 173 ~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~-~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i 251 (357)
T 4g56_B 173 VLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRK-PKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNV 251 (357)
T ss_dssp EEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTS-SSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCE
T ss_pred EEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCC-CceeeeeeeccccccccchhhhhcccceEEEeecccce
Confidence 2 22222 234689999999999999998 4554443 4567789999999984 688999999999
Q ss_pred EEEEcCCCceeeEEeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEecCCCccc
Q psy8758 143 RLYLAHQGHSRDIYHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 143 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
++||+++++....+ .+|...|++++|+|++ ++|++++.|++|++||+++++.+
T Consensus 252 ~~wd~~~~~~~~~~-~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~ 305 (357)
T 4g56_B 252 SLVNIKNPDSAQTS-AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVF 305 (357)
T ss_dssp EEEESSCGGGCEEE-CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEE
T ss_pred eEEECCCCcEeEEE-eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEe
Confidence 99999999888776 6888999999999987 57999999999999999998765
No 30
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-33 Score=203.27 Aligned_cols=191 Identities=16% Similarity=0.248 Sum_probs=152.9
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS- 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~- 80 (198)
+.|.+++|+|++++|++++.|+.+++|++..+..........|...|.+++|+|+++.+++ ++.|+.|++||++....
T Consensus 62 ~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s-~s~D~~v~iwd~~~~~~~ 140 (345)
T 3fm0_A 62 RTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLAT-CSRDKSVWVWEVDEEDEY 140 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEE-EETTSCEEEEEECTTSCE
T ss_pred CcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEE-EECCCeEEEEECCCCCCe
Confidence 4699999999999999999999999999976642211111236788999999999998876 56999999999975432
Q ss_pred ----ccccc-----------cCceEEEecCCCcEEEEEccCCC-cceeeecCCCcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758 81 ----PLNVH-----------KDMTSAAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 144 (198)
Q Consensus 81 ----~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v 144 (198)
.+..| .+..+++++.|+.|++||++... .....+.+|...|.+++|+|++++|++++.|++|++
T Consensus 141 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~i 220 (345)
T 3fm0_A 141 ECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRI 220 (345)
T ss_dssp EEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEE
Confidence 22223 23469999999999999998622 245678899999999999999999999999999999
Q ss_pred EEcCCC---------------ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758 145 YLAHQG---------------HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS 193 (198)
Q Consensus 145 ~d~~~~---------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~ 193 (198)
||.... +++..+...|...|.+++|+|++..|++++.|+.|++|+.+++
T Consensus 221 W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~ 284 (345)
T 3fm0_A 221 WRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPN 284 (345)
T ss_dssp EEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTT
T ss_pred eccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCC
Confidence 997432 1222333347889999999999999999999999999998764
No 31
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.5e-34 Score=207.92 Aligned_cols=194 Identities=17% Similarity=0.218 Sum_probs=156.1
Q ss_pred cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeee---eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRK---VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~ 77 (198)
+.|.++.|+|++ ..|++++.|+.|++||+.+++....+.. ..|...+.++.|+|.+..++++|+.|+.|++||++.
T Consensus 158 ~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~ 237 (380)
T 3iz6_a 158 GYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRI 237 (380)
T ss_dssp SCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTT
T ss_pred cceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCC
Confidence 357788999964 5799999999999999998876655522 236778999999884444455578999999999974
Q ss_pred CC---Ccccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCC-------cceEEEEEccCCCEEEEe
Q psy8758 78 LN---SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT-------SAVTSVDYSPTGREFVAG 136 (198)
Q Consensus 78 ~~---~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-------~~i~~~~~sp~~~~l~~~ 136 (198)
.. ..+.+|. +..+++++.|++|++||+++ +..+..+..+. ..+++++|+|+|++|+++
T Consensus 238 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g 316 (380)
T 3iz6_a 238 TSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT-GHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAG 316 (380)
T ss_dssp TCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT-TEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEE
T ss_pred CCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC-CcEEEEecccccccccccCceEEEEECCCCCEEEEE
Confidence 32 2233332 35699999999999999998 56666654432 248999999999999999
Q ss_pred ecCCcEEEEEcCCCceeeEE---eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 137 GYDKSLRLYLAHQGHSRDIY---HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 137 ~~d~~v~v~d~~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+.|+.|++||+..++....+ ..+|...|.+++|+|+|++|++|+.|+.|++|++..++.+
T Consensus 317 ~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~i 379 (380)
T 3iz6_a 317 YSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRKI 379 (380)
T ss_dssp CTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSSC
T ss_pred ECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCccc
Confidence 99999999999998876655 2578899999999999999999999999999999887653
No 32
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.9e-33 Score=204.95 Aligned_cols=190 Identities=13% Similarity=0.125 Sum_probs=160.0
Q ss_pred cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC-CCeEEEEecCCccEEEEeccCCC
Q psy8758 2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM-EAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
+.|++++|+|++ ++|++++.||.|++||+.+++....+....|...|.+++|+|+ +..++ +++.|+.|++||++...
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~-s~~~d~~i~iwd~~~~~ 152 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLF-VSSIRGATTLRDFSGSV 152 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEE-EEETTTEEEEEETTSCE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEE-EEeCCCEEEEEECCCCc
Confidence 579999999999 8999999999999999998876666654457889999999994 45555 56799999999997532
Q ss_pred C-cccc--------------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC-EEEEeecCCcEE
Q psy8758 80 S-PLNV--------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGGYDKSLR 143 (198)
Q Consensus 80 ~-~~~~--------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~~d~~v~ 143 (198)
. .+.. ..+..+++++.|+.|++||++ ++++..+..|...|.+++|+|+++ +|++++.|+.|+
T Consensus 153 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 230 (383)
T 3ei3_B 153 IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD--GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVK 230 (383)
T ss_dssp EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT--SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC--CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEE
Confidence 1 1111 123579999999999999995 578888899999999999999999 999999999999
Q ss_pred EEEcCC----CceeeEEeccCcccEEEEEEcC-CCCEEEEecCCCeEEEEecCCCccc
Q psy8758 144 LYLAHQ----GHSRDIYHTKRMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 144 v~d~~~----~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+||+++ +.....+ +|...|.+++|+| ++++|++++.|+.|++||+++++.+
T Consensus 231 iwd~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~ 286 (383)
T 3ei3_B 231 LWDLRNIKDKNSYIAEM--PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKP 286 (383)
T ss_dssp EEEGGGCCSTTCEEEEE--ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSC
T ss_pred EEeCCCCCcccceEEEe--cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccc
Confidence 999998 4455544 6889999999999 9999999999999999999987754
No 33
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=202.75 Aligned_cols=188 Identities=13% Similarity=0.235 Sum_probs=149.9
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCc--eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE--KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
++|.+++|+|+ +|++++.|+.|++||+..+. ....+....|...|.+++|+|+++.+++ ++.|+.|++||+....
T Consensus 15 ~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las-~s~D~~v~iw~~~~~~ 91 (330)
T 2hes_X 15 EKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAA-GSFDSTVSIWAKEESA 91 (330)
T ss_dssp SCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEE-EETTSCEEEEEC----
T ss_pred CceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEE-EeCCCcEEEEEcccCc
Confidence 57999999988 99999999999999997653 2222212126788999999999998876 5699999999985321
Q ss_pred ---------Ccccccc-----------CceEEEecCCCcEEEEEccCCC---cceeeecCCCcceEEEEEccCCCEEEEe
Q psy8758 80 ---------SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLN---SPLNVHKDMTSAVTSVDYSPTGREFVAG 136 (198)
Q Consensus 80 ---------~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~i~~~~~sp~~~~l~~~ 136 (198)
..+..|. +.++++++.|++|++||++... +.+..+..|...|.+++|+|++++|+++
T Consensus 92 ~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~ 171 (330)
T 2hes_X 92 DRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASS 171 (330)
T ss_dssp ---CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEE
T ss_pred CccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEE
Confidence 1122332 3579999999999999995422 4566778899999999999999999999
Q ss_pred ecCCcEEEEEcCCC--ceeeEEeccCcccEEEEEEcCC--CCEEEEecCCCeEEEEecCCC
Q psy8758 137 GYDKSLRLYLAHQG--HSRDIYHTKRMQHVTHTVWSLD--NKFVISASDEMNLRVWKAHAS 193 (198)
Q Consensus 137 ~~d~~v~v~d~~~~--~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~v~~w~~~~~ 193 (198)
+.|++|++||..++ +++..+ .+|...|.+++|+|+ +.+|++++.|++|++||++++
T Consensus 172 s~D~~i~iW~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 172 SYDDTVRIWKDYDDDWECVAVL-NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp ETTSCEEEEEEETTEEEEEEEE-CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred cCCCeEEEEECCCCCeeEEEEc-cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 99999999999876 444444 689999999999998 678999999999999998754
No 34
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5e-33 Score=200.25 Aligned_cols=186 Identities=17% Similarity=0.217 Sum_probs=151.3
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS- 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~- 80 (198)
+.|.+++|+|+++++++++.|+.|++||+.+++....+.. |...|.+++|+|+++.++++ +.|+.|++||+.....
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~--h~~~v~~v~~sp~~~~l~s~-~~d~~i~~wd~~~~~~~ 153 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVG--HQSEVYSVAFSPDNRQILSA-GAEREIKLWNILGECKF 153 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEEC--CCSCEEEEEECSSTTEEEEE-ETTSCEEEEESSSCEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcC--CCCcEEEEEECCCCCEEEEE-cCCCEEEEEeccCCcee
Confidence 4689999999999999999999999999998887666554 57889999999999998775 6899999999863211
Q ss_pred ---ccccc----------c-----------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEe
Q psy8758 81 ---PLNVH----------K-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAG 136 (198)
Q Consensus 81 ---~~~~~----------~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~ 136 (198)
....| + ...+++++.|+.|++||.. ......+..|...|.+++|+|+|++|+++
T Consensus 154 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~~l~sg 231 (343)
T 2xzm_R 154 SSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNGKYIATG 231 (343)
T ss_dssp ECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred eeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCCCEEEEE
Confidence 00011 1 1478999999999999954 46677788999999999999999999999
Q ss_pred ecCCcEEEEEcCCC-ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 137 GYDKSLRLYLAHQG-HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 137 ~~d~~v~v~d~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
+.|+.|++||+... .....+ .+...|.+++|+|++++++++ .|+.|++|++.+++.
T Consensus 232 s~dg~v~iwd~~~~~~~~~~~--~~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~ 288 (343)
T 2xzm_R 232 GKDKKLLIWDILNLTYPQREF--DAGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSK 288 (343)
T ss_dssp ETTCEEEEEESSCCSSCSEEE--ECSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCS
T ss_pred cCCCeEEEEECCCCcccceee--cCCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCC
Confidence 99999999999543 333333 234679999999999988755 578899999987664
No 35
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-33 Score=201.62 Aligned_cols=191 Identities=15% Similarity=0.255 Sum_probs=146.8
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCc----eeeeeeee-eecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE----KLGPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR 76 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~----~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~ 76 (198)
++|.+++|+|++++|++++.|+.|++|++.... ....+... .|...|.+++|+|+++++++ ++.|+.|++||++
T Consensus 59 ~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las-~s~D~~v~iwd~~ 137 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLAT-CSRDKSVWIWETD 137 (330)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEE-EETTSCEEEEECC
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEE-EeCCCEEEEEecc
Confidence 469999999999999999999999999985321 11112222 26788999999999998876 5699999999995
Q ss_pred CCC------Ccccccc-----------CceEEEecCCCcEEEEEccCCC-cceeeecCCCcceEEEEEccC--CCEEEEe
Q psy8758 77 QLN------SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSPT--GREFVAG 136 (198)
Q Consensus 77 ~~~------~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~sp~--~~~l~~~ 136 (198)
... ..+..|. +..+++++.|++|++||++... +++..+.+|...|.+++|+|+ +..|+++
T Consensus 138 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 217 (330)
T 2hes_X 138 ESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSG 217 (330)
T ss_dssp TTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEE
T ss_pred CCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEE
Confidence 321 1223332 3579999999999999987621 567788899999999999998 6789999
Q ss_pred ecCCcEEEEEcCCC--------ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 137 GYDKSLRLYLAHQG--------HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 137 ~~d~~v~v~d~~~~--------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
+.|++|++||+..+ .....+...|...|.+++|++++ +|++++.||.|++||..+++
T Consensus 218 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 218 SDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp ETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTE
T ss_pred eCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCc
Confidence 99999999999764 22233323488899999999765 78999999999999998763
No 36
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-34 Score=210.79 Aligned_cols=189 Identities=15% Similarity=0.158 Sum_probs=149.0
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCC--ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS--EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
++|++++|+|++++|++++.|+.|++||+.++ +....+.. |...|.+++|+|++++++++ +.|+.|++||+.+..
T Consensus 12 ~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~-s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 12 KPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSD--HDKIVTCVDWAPKSNRIVTC-SQDRNAYVYEKRPDG 88 (377)
T ss_dssp SCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCC--CSSCEEEEEECTTTCCEEEE-ETTSSEEEC------
T ss_pred CcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEec--CCceEEEEEEeCCCCEEEEE-eCCCeEEEEEcCCCC
Confidence 57999999999999999999999999999877 44444443 67889999999999988764 689999999998654
Q ss_pred ---C--ccccc-----------cCceEEEecCCCcEEEEEccCCCc--ceeeecC-CCcceEEEEEccCCCEEEEeecCC
Q psy8758 80 ---S--PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNS--PLNVHKD-MTSAVTSVDYSPTGREFVAGGYDK 140 (198)
Q Consensus 80 ---~--~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~-~~~~i~~~~~sp~~~~l~~~~~d~ 140 (198)
. .+..| .+..+++++.|+.|++||++.... ....+.. |...|.+++|+|++++|++++.|+
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR 168 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC
Confidence 1 12222 234689999999999999987322 4667776 999999999999999999999999
Q ss_pred cEEEEEcCC------------------CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 141 SLRLYLAHQ------------------GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 141 ~v~v~d~~~------------------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
.|++||+.. +++...+ +|...|.+++|+|++++|++++.||.|++||+++++.
T Consensus 169 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 169 KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 999999963 2233332 7889999999999999999999999999999998876
No 37
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.2e-34 Score=202.57 Aligned_cols=189 Identities=11% Similarity=0.163 Sum_probs=150.0
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccCCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
++|++++|+|+|++|++|+.|+.|++||+.+++.........|...|.+++|+|+ ++.+++ ++.|++|++||+++..
T Consensus 14 ~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s-~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 14 DMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILAS-CSYDRKVIIWREENGT 92 (316)
T ss_dssp CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEE-EETTSCEEEECCSSSC
T ss_pred CeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEE-EECCCEEEEEECCCCc
Confidence 5799999999999999999999999999987643211112236889999999863 666665 5799999999997642
Q ss_pred C----ccccc----------c---CceEEEecCCCcEEEEEccCCCc--ceeeecCCCcceEEEEEccC-----------
Q psy8758 80 S----PLNVH----------K---DMTSAAANEDFNLYSYDIRQLNS--PLNVHKDMTSAVTSVDYSPT----------- 129 (198)
Q Consensus 80 ~----~~~~~----------~---~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~sp~----------- 129 (198)
. .+..| + +.++++++.|+.|++||++.... ....+..|...+.+++|+|+
T Consensus 93 ~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 172 (316)
T 3bg1_A 93 WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPS 172 (316)
T ss_dssp CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CC
T ss_pred ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccccc
Confidence 1 11222 1 35799999999999999986322 23455678899999999998
Q ss_pred ------CCEEEEeecCCcEEEEEcCCCc---eeeEEeccCcccEEEEEEcCCC----CEEEEecCCCeEEEEecCC
Q psy8758 130 ------GREFVAGGYDKSLRLYLAHQGH---SRDIYHTKRMQHVTHTVWSLDN----KFVISASDEMNLRVWKAHA 192 (198)
Q Consensus 130 ------~~~l~~~~~d~~v~v~d~~~~~---~~~~~~~~~~~~v~~~~~s~~~----~~l~~~~~dg~v~~w~~~~ 192 (198)
+++|++++.|+.|++||++... ....+ .+|...|.+++|+|++ ++|++++.|++|++|++++
T Consensus 173 ~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 173 GQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL-EAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp SCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC-BCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred ccCccccceEEEecCCCeEEEEEeCCCCccceeeec-ccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 4789999999999999997652 33333 6888999999999986 7899999999999999976
No 38
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=1e-32 Score=196.05 Aligned_cols=187 Identities=18% Similarity=0.254 Sum_probs=145.3
Q ss_pred eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--
Q psy8758 4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP-- 81 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~-- 81 (198)
+++|+||+++ +|++| .|++|+|||+.+++....+..+.|...|.+++|+|+++++++ |+.|+.|++||+++.+..
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~s-gs~Dg~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV-GTSSAEVQLWDVQQQKRLRN 104 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE-EETTSEEEEEETTTTEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEE-EECCCcEEEeecCCceeEEE
Confidence 4679999986 66665 589999999999988777776667888999999999998876 579999999998754311
Q ss_pred cccc----------------------------------------------------cCceEEEecCCCcEEEEEccCCCc
Q psy8758 82 LNVH----------------------------------------------------KDMTSAAANEDFNLYSYDIRQLNS 109 (198)
Q Consensus 82 ~~~~----------------------------------------------------~~~~~~~~~~~~~i~~~d~~~~~~ 109 (198)
+..| .+..+++++.|+.|++||+++...
T Consensus 105 ~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 184 (318)
T 4ggc_A 105 MTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 184 (318)
T ss_dssp EECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTT
T ss_pred ecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcc
Confidence 1111 112478888889999998764210
Q ss_pred ---ceee--------------------------------------------ecCCCcceEEEEEccCCCEEEEee--cCC
Q psy8758 110 ---PLNV--------------------------------------------HKDMTSAVTSVDYSPTGREFVAGG--YDK 140 (198)
Q Consensus 110 ---~~~~--------------------------------------------~~~~~~~i~~~~~sp~~~~l~~~~--~d~ 140 (198)
.... ...+...+..+.|+|+++.+++++ .|+
T Consensus 185 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~ 264 (318)
T 4ggc_A 185 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQN 264 (318)
T ss_dssp BSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTC
T ss_pred cccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCC
Confidence 0000 111234567788888888776654 799
Q ss_pred cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
.|++||+++++++..+ .+|.+.|++++|+|+|++|++++.||+|++||+.+.+
T Consensus 265 ~i~iwd~~~~~~~~~l-~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 265 QLVIWKYPTMAKVAEL-KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp CEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEEEEECCCCcEEEEE-cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 9999999999998887 6899999999999999999999999999999998764
No 39
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.9e-32 Score=194.65 Aligned_cols=186 Identities=19% Similarity=0.265 Sum_probs=148.8
Q ss_pred cceeEEEE-----CC-CCceEEEeeCCCeEEEEEccCCce----eeeeeee-eecCceeeEEeCCCCCeEEEEecCCccE
Q psy8758 2 QHVTHTVW-----SL-DNKFVISASDEMNLRVWKAHASEK----LGPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNL 70 (198)
Q Consensus 2 ~~v~~~~~-----s~-~~~~l~~~~~d~~i~i~~~~~~~~----~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i 70 (198)
+.|++++| ++ ++++|++|+.|++|++||+...+. ....... .|...|.+++|+|++..+++ ++.|+.|
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s-~s~D~~v 100 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS-SSWDKTL 100 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE-EETTSEE
T ss_pred hhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE-EcCCCcE
Confidence 57999999 77 899999999999999999975431 1112222 36788999999999998876 5799999
Q ss_pred EEEeccCCCC--cccccc-----------CceEEEecCCCcEEEEEccCCCcceeee---cCCCcceEEEEEccCC----
Q psy8758 71 YSYDIRQLNS--PLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVH---KDMTSAVTSVDYSPTG---- 130 (198)
Q Consensus 71 ~~~d~~~~~~--~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~i~~~~~sp~~---- 130 (198)
++||+++... .+..|. +..+++++.|+.|++||+.. ...... ..|...+.+++|+|++
T Consensus 101 ~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 178 (343)
T 2xzm_R 101 RLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG--ECKFSSAEKENHSDWVSCVRYSPIMKSAN 178 (343)
T ss_dssp EEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS--CEEEECCTTTSCSSCEEEEEECCCCCSCS
T ss_pred EEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC--CceeeeecccCCCceeeeeeecccccccc
Confidence 9999986542 233333 34689999999999999974 222222 3688899999999987
Q ss_pred ------CEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758 131 ------REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 192 (198)
Q Consensus 131 ------~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~ 192 (198)
.+|++++.|+.|++||. ..+....+ .+|...|.+++|+|+|++|++++.||.|++||+.+
T Consensus 179 ~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~-~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 179 KVQPFAPYFASVGWDGRLKVWNT-NFQIRYTF-KAHESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp CCCSSCCEEEEEETTSEEEEEET-TTEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred ccCCCCCEEEEEcCCCEEEEEcC-CCceeEEE-cCccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 78999999999999994 44444444 68889999999999999999999999999999954
No 40
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-32 Score=201.05 Aligned_cols=188 Identities=12% Similarity=0.161 Sum_probs=153.9
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCC-CCCeEEEEecCCccEEEEeccCCCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNP-MEAFVFTAANEDFNLYSYDIRQLNS 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~~d~~~~~~ 80 (198)
+.|.+++|+|++++|++++.|+.|++||+.+++....+. +...+.+++|+| ++..+++ ++.|+.|++||+++...
T Consensus 166 ~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~~l~~-~s~d~~v~iwd~~~~~~ 241 (393)
T 1erj_A 166 QDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS---IEDGVTTVAVSPGDGKYIAA-GSLDRAVRVWDSETGFL 241 (393)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---CSSCEEEEEECSTTCCEEEE-EETTSCEEEEETTTCCE
T ss_pred CCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE---cCCCcEEEEEECCCCCEEEE-EcCCCcEEEEECCCCcE
Confidence 468999999999999999999999999998887544443 466789999999 6666655 67999999999875432
Q ss_pred c--c-------ccc-----------cCceEEEecCCCcEEEEEccCC-----------CcceeeecCCCcceEEEEEccC
Q psy8758 81 P--L-------NVH-----------KDMTSAAANEDFNLYSYDIRQL-----------NSPLNVHKDMTSAVTSVDYSPT 129 (198)
Q Consensus 81 ~--~-------~~~-----------~~~~~~~~~~~~~i~~~d~~~~-----------~~~~~~~~~~~~~i~~~~~sp~ 129 (198)
. + ..| .+..+++++.|+.|++||++.. ......+.+|...|.+++|+|+
T Consensus 242 ~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 321 (393)
T 1erj_A 242 VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQN 321 (393)
T ss_dssp EEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGG
T ss_pred EEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCC
Confidence 1 1 122 2356899999999999999752 1234566789999999999999
Q ss_pred CCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcC------CCCEEEEecCCCeEEEEecCCCc
Q psy8758 130 GREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL------DNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 130 ~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~------~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
+++|++++.|+.|++||+.+++.+..+ .+|...|.+++|++ ++++|++++.||.|++|+++..+
T Consensus 322 ~~~l~sgs~D~~v~iwd~~~~~~~~~l-~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~~ 391 (393)
T 1erj_A 322 DEYILSGSKDRGVLFWDKKSGNPLLML-QGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKIA 391 (393)
T ss_dssp GCEEEEEETTSEEEEEETTTCCEEEEE-ECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC-
T ss_pred CCEEEEEeCCCeEEEEECCCCeEEEEE-CCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccccC
Confidence 999999999999999999999988776 68999999999986 67899999999999999987643
No 41
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.3e-33 Score=213.03 Aligned_cols=189 Identities=15% Similarity=0.250 Sum_probs=154.3
Q ss_pred cceeEEEECCCCceEEEeeCC----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSLDNKFVISASDE----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~ 77 (198)
++|.+++|+|+|++|++++.+ +.|++||. ++....+.. |...|.+++|+|+++..+++++.|+.|++||.+.
T Consensus 104 ~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~g--h~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~ 179 (611)
T 1nr0_A 104 GPVKDISWDSESKRIAAVGEGRERFGHVFLFDT--GTSNGNLTG--QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP 179 (611)
T ss_dssp SCEEEEEECTTSCEEEEEECCSSCSEEEEETTT--CCBCBCCCC--CSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT
T ss_pred CceEEEEECCCCCEEEEEECCCCceeEEEEeeC--CCCcceecC--CCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC
Confidence 579999999999999988765 46777774 444444443 6788999999999986556678999999999865
Q ss_pred CC--Ccccccc-----------CceEEEecCCCcEEEEEccCCCcceeeec-------CCCcceEEEEEccCCCEEEEee
Q psy8758 78 LN--SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHK-------DMTSAVTSVDYSPTGREFVAGG 137 (198)
Q Consensus 78 ~~--~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-------~~~~~i~~~~~sp~~~~l~~~~ 137 (198)
.+ ..+..|. +..+++++.|++|++||+.+ ++.+..+. +|...|.+++|+|++++|++++
T Consensus 180 ~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~-g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 180 FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD-GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS 258 (611)
T ss_dssp BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEE
T ss_pred CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC-CcEeeeeccccccccccCCCEEEEEECCCCCEEEEEe
Confidence 32 2233333 34689999999999999987 56666663 7999999999999999999999
Q ss_pred cCCcEEEEEcCCCceeeEE------------------------------------------eccCcccEEEEEEcCCCCE
Q psy8758 138 YDKSLRLYLAHQGHSRDIY------------------------------------------HTKRMQHVTHTVWSLDNKF 175 (198)
Q Consensus 138 ~d~~v~v~d~~~~~~~~~~------------------------------------------~~~~~~~v~~~~~s~~~~~ 175 (198)
.|++|++||+.+++....+ ..+|...|.+++|+|+|++
T Consensus 259 ~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~ 338 (611)
T 1nr0_A 259 ADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKT 338 (611)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred CCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCE
Confidence 9999999999987654322 2468889999999999999
Q ss_pred EEEecCCCeEEEEecCCCcc
Q psy8758 176 VISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 176 l~~~~~dg~v~~w~~~~~~~ 195 (198)
|++++.|+.|++||+.+++.
T Consensus 339 l~s~s~D~~v~~Wd~~~~~~ 358 (611)
T 1nr0_A 339 LFSADAEGHINSWDISTGIS 358 (611)
T ss_dssp EEEEETTSCEEEEETTTCCE
T ss_pred EEEEeCCCcEEEEECCCCce
Confidence 99999999999999998764
No 42
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.8e-32 Score=200.64 Aligned_cols=193 Identities=13% Similarity=0.207 Sum_probs=158.4
Q ss_pred cceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeee-----------eecCceeeEEeCC-CCCeEEEEecCCc
Q psy8758 2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKV-----------VMSLRSNMVSWNP-MEAFVFTAANEDF 68 (198)
Q Consensus 2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-----------~~~~~v~~~~~~~-~~~~~~~~~~~d~ 68 (198)
++|++++|+| ++++|++++.||.|++||+.+++....+... .|...|.+++|+| ++..++ +++.|+
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-s~~~d~ 122 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT-SSSFDK 122 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEE-EEETTS
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEE-EEeCCC
Confidence 5799999999 9999999999999999999887654444321 2678899999999 455555 467899
Q ss_pred cEEEEeccCCCCccc---------------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC-E
Q psy8758 69 NLYSYDIRQLNSPLN---------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-E 132 (198)
Q Consensus 69 ~i~~~d~~~~~~~~~---------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~ 132 (198)
.|++||+.+...... ......+++++.++.|++||+++ .+.+..+..|...+.+++|+|+++ .
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l 201 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS-GSCSHILQGHRQEILAVSWSPRYDYI 201 (408)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS-SCCCEEECCCCSCEEEEEECSSCTTE
T ss_pred eEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC-cceeeeecCCCCcEEEEEECCCCCcE
Confidence 999999986542111 11234799999999999999998 678888889999999999999998 5
Q ss_pred EEEeecCCcEEEEEcCCCceeeEEe---------------ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 133 FVAGGYDKSLRLYLAHQGHSRDIYH---------------TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 133 l~~~~~d~~v~v~d~~~~~~~~~~~---------------~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+++++.|+.|++||++.+....... ..|...|.+++|+|++++|++++.||.|++||+.+++.+
T Consensus 202 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (408)
T 4a11_B 202 LATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENT 280 (408)
T ss_dssp EEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBC
T ss_pred EEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccc
Confidence 8899999999999998765322221 467789999999999999999999999999999987753
No 43
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.3e-33 Score=202.73 Aligned_cols=189 Identities=11% Similarity=0.173 Sum_probs=155.0
Q ss_pred cceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeee-eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758 2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRK-VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
++|.+++|+| ++++|++++.||.|++||+.+++....+.. ..+...|.+++|+|+++.++++ +.|+.|++||+++..
T Consensus 116 ~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 116 NAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSC-GMDHSLKLWRINSKR 194 (366)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEE-ETTSCEEEEESCSHH
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEe-cCCCCEEEEECCCCc
Confidence 5799999999 999999999999999999998876665532 2367889999999999988775 689999999997542
Q ss_pred Ccc--c----------------------------ccc---------CceEEEecCCCcEEEEEccCCCc-----------
Q psy8758 80 SPL--N----------------------------VHK---------DMTSAAANEDFNLYSYDIRQLNS----------- 109 (198)
Q Consensus 80 ~~~--~----------------------------~~~---------~~~~~~~~~~~~i~~~d~~~~~~----------- 109 (198)
... . .|. +..+++++.|+.|++||+++...
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 274 (366)
T 3k26_A 195 MMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESN 274 (366)
T ss_dssp HHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCC
T ss_pred cccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcc
Confidence 110 0 021 45799999999999999987322
Q ss_pred --ceeeecCCCcceEEEEEccC--CCEEEEeecCCcEEEEEcCCCceee----EEeccC--cccEEEEEEcCCCCEEEEe
Q psy8758 110 --PLNVHKDMTSAVTSVDYSPT--GREFVAGGYDKSLRLYLAHQGHSRD----IYHTKR--MQHVTHTVWSLDNKFVISA 179 (198)
Q Consensus 110 --~~~~~~~~~~~i~~~~~sp~--~~~l~~~~~d~~v~v~d~~~~~~~~----~~~~~~--~~~v~~~~~s~~~~~l~~~ 179 (198)
.+..+..|...+.+++|+|+ +++|++++.||.|++||+.+++... .+ ..| ...|.+++|+|++++|+++
T Consensus 275 ~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~~l~s~ 353 (366)
T 3k26_A 275 VTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTL-THHKCGAAIRQTSFSRDSSILIAV 353 (366)
T ss_dssp EEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEE-CCTTCCSCEEEEEECTTSSEEEEE
T ss_pred hheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEE-cccccCCceEEEEeCCCCCeEEEE
Confidence 26667788889999999999 9999999999999999999876432 33 455 6899999999999999999
Q ss_pred cCCCeEEEEecCC
Q psy8758 180 SDEMNLRVWKAHA 192 (198)
Q Consensus 180 ~~dg~v~~w~~~~ 192 (198)
+.||.|++||+.+
T Consensus 354 ~~dg~i~iwd~~~ 366 (366)
T 3k26_A 354 CDDASIWRWDRLR 366 (366)
T ss_dssp ETTSEEEEEEC--
T ss_pred eCCCEEEEEEecC
Confidence 9999999999864
No 44
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.4e-32 Score=209.81 Aligned_cols=180 Identities=22% Similarity=0.334 Sum_probs=152.6
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-C
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-S 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-~ 80 (198)
.+|.+++|+|++++|++++.|+.|++||. +++....+.. |...|.+++|+|+++.++++ +.|+.|++||..... .
T Consensus 386 ~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~--~~~~v~~~~~s~d~~~l~~~-~~d~~v~~w~~~~~~~~ 461 (577)
T 2ymu_A 386 SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG--HSSSVWGVAFSPDDQTIASA-SDDKTVKLWNRNGQLLQ 461 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEEC--CSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTSCEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecC--CCCCeEEEEECCCCCEEEEE-cCCCEEEEEECCCCEEE
Confidence 46899999999999999999999999996 4554444443 57889999999999988775 689999999975321 1
Q ss_pred ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758 81 PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ 149 (198)
Q Consensus 81 ~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~ 149 (198)
.+..| .+..+++++.|+.|++||.. ++.+..+.+|...|++++|+|++++|++++.|+.|++||. +
T Consensus 462 ~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~--~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~ 538 (577)
T 2ymu_A 462 TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-N 538 (577)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT--SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-T
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC--CCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-C
Confidence 22222 33568999999999999964 5788899999999999999999999999999999999996 5
Q ss_pred CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758 150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK 189 (198)
Q Consensus 150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~ 189 (198)
++.+..+ .+|...|++++|+|||++|++++.|++|++||
T Consensus 539 ~~~~~~~-~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 539 GQLLQTL-TGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SCEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 6666665 68999999999999999999999999999997
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.6e-32 Score=200.98 Aligned_cols=187 Identities=10% Similarity=0.067 Sum_probs=155.0
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
+.|++++|+|++++|++++.|+.|++||+.+++....+.. |...|.+++|+|+++.+++ ++.|+.|++||+++....
T Consensus 140 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s-~~~d~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 140 SEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG--HRATVTDIAIIDRGRNVLS-ASLDGTIRLWECGTGTTI 216 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC--CSSCEEEEEEETTTTEEEE-EETTSCEEEEETTTTEEE
T ss_pred CccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC--CCCcEEEEEEcCCCCEEEE-EcCCCcEEEeECCCCcee
Confidence 5799999999999999999999999999998887666653 5788999999999998886 569999999999754321
Q ss_pred --ccc-----------------------------------ccCceEEEecCCCcEEEEEccCCCcceeee-cCCCcceEE
Q psy8758 82 --LNV-----------------------------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAVTS 123 (198)
Q Consensus 82 --~~~-----------------------------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~ 123 (198)
+.. ..+..+++++.|+.|++||+++ ......+ ..|...+.+
T Consensus 217 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~v~~ 295 (420)
T 3vl1_A 217 HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFS-KEQTIQLPSKFTCSCNS 295 (420)
T ss_dssp EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTT-CCEEEEECCTTSSCEEE
T ss_pred EEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCC-CceeEEcccccCCCcee
Confidence 111 1335789999999999999998 4444444 558889999
Q ss_pred EEEccCCC-EEEEeecCCcEEEEEcCCCce-eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758 124 VDYSPTGR-EFVAGGYDKSLRLYLAHQGHS-RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS 193 (198)
Q Consensus 124 ~~~sp~~~-~l~~~~~d~~v~v~d~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~ 193 (198)
++|+|+++ +|++++.|+.|++||+++++. +..+...|...+..+.| +++++|++++.|+.|++|++.+.
T Consensus 296 ~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 296 LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCT
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCC
Confidence 99999999 999999999999999998754 55554457788888855 57889999999999999998774
No 46
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.2e-32 Score=196.19 Aligned_cols=191 Identities=15% Similarity=0.201 Sum_probs=156.9
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCc--eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE--KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
++|++++|+|++++|++++.|+.|++||+.+++ ....+. .|...|.+++|+|+++.++++ +.|+.|++||++...
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~~~-~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELK--EHNGQVTGVDWAPDSNRIVTC-GTDRNAYVWTLKGRT 85 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEE--CCSSCEEEEEEETTTTEEEEE-ETTSCEEEEEEETTE
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeec--CCCCcccEEEEeCCCCEEEEE-cCCCeEEEEECCCCe
Confidence 579999999999999999999999999998875 444443 367889999999999988775 689999999997653
Q ss_pred C----ccccc-----------cCceEEEecCCCcEEEEEccCCCc---ceeeecCCCcceEEEEEccCCCEEEEeecCCc
Q psy8758 80 S----PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNS---PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKS 141 (198)
Q Consensus 80 ~----~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~ 141 (198)
. .+..| .+..+++++.|+.+++||++.... .......|...+.+++|+|++++|++++.|+.
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 165 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFK 165 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSC
T ss_pred eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCC
Confidence 1 11112 235789999999999999987322 12233568899999999999999999999999
Q ss_pred EEEEEcC------------------CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 142 LRLYLAH------------------QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 142 v~v~d~~------------------~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
|++||++ .++....+ ..|...|.+++|+|++++|++++.||.|++||+++++.+
T Consensus 166 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 166 CRIFSAYIKEVEERPAPTPWGSKMPFGELMFES-SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC-CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEE
T ss_pred EEEEEcccccccccccccccccccchhhheEec-CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCcee
Confidence 9999964 45555554 578889999999999999999999999999999988764
No 47
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.6e-32 Score=202.32 Aligned_cols=189 Identities=12% Similarity=0.309 Sum_probs=148.7
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCc-----------eeeeeeeeeec------------CceeeEEeCCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE-----------KLGPIRKVVMS------------LRSNMVSWNPME- 57 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~-----------~~~~~~~~~~~------------~~v~~~~~~~~~- 57 (198)
+.|++++|+|+|++|++|+.||.|++|++.+++ ....+.. |. ..|.+++|+|++
T Consensus 29 ~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~--h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQS--HEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEEC--CCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred CcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccc--ccccccccccccccCceEEEEEcCCCC
Confidence 579999999999999999999999999998765 2333333 44 779999999998
Q ss_pred -CeEEEEecCCccEEEEeccCCCC-----------------------------------------c-ccccc--------
Q psy8758 58 -AFVFTAANEDFNLYSYDIRQLNS-----------------------------------------P-LNVHK-------- 86 (198)
Q Consensus 58 -~~~~~~~~~d~~i~~~d~~~~~~-----------------------------------------~-~~~~~-------- 86 (198)
..+++ ++.|+.|++||+..... . ...|.
T Consensus 107 ~~~l~s-~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 107 AAQFLL-STNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSEEEE-EECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred cceEEE-eCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 56665 47899999999864211 0 12222
Q ss_pred ---CceEEEecCCCcEEEEEccCCCccee-------eecCCCcceEEEEEccCC-CEEEEeecCCcEEEEEcCCCce---
Q psy8758 87 ---DMTSAAANEDFNLYSYDIRQLNSPLN-------VHKDMTSAVTSVDYSPTG-REFVAGGYDKSLRLYLAHQGHS--- 152 (198)
Q Consensus 87 ---~~~~~~~~~~~~i~~~d~~~~~~~~~-------~~~~~~~~i~~~~~sp~~-~~l~~~~~d~~v~v~d~~~~~~--- 152 (198)
+..++++ .|+.|++||++.....+. .+..|...|.+++|+|++ ++|++++.|+.|++||+++++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred cCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 2457777 899999999985344444 356789999999999998 8999999999999999999876
Q ss_pred -eeEEeccCcc------------cEEEEEEcCCCCEEEEecCCCeEEEEecCC-Cccc
Q psy8758 153 -RDIYHTKRMQ------------HVTHTVWSLDNKFVISASDEMNLRVWKAHA-SEKL 196 (198)
Q Consensus 153 -~~~~~~~~~~------------~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~-~~~~ 196 (198)
...+ ..|.. .|.+++|+|++++|++++. +.|++||+++ ++.+
T Consensus 265 ~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~ 320 (447)
T 3dw8_B 265 HSKLF-EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPV 320 (447)
T ss_dssp TCEEE-CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCS
T ss_pred eeeEe-ccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccc
Confidence 4554 45554 8999999999999999998 9999999987 6554
No 48
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.9e-31 Score=189.57 Aligned_cols=190 Identities=20% Similarity=0.360 Sum_probs=155.0
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS- 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~- 80 (198)
..|.+++|+|++++|++++.|+.|++||+.+++....+.. |...|.+++|+|+++.+++ ++.|+.|++||+++...
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s-~~~d~~i~iwd~~~~~~~ 142 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG--HSNYVFCCNFNPQSNLIVS-GSFDESVRIWDVKTGKCL 142 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECSSSSEEEE-EETTSCEEEEETTTCCEE
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcC--CCCCEEEEEEcCCCCEEEE-EeCCCcEEEEECCCCEEE
Confidence 4689999999999999999999999999998887666654 5778999999999998876 56999999999986542
Q ss_pred -ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758 81 -PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA 147 (198)
Q Consensus 81 -~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~ 147 (198)
.+..| .+..+++++.|+.|++||+++ .+.+..+ ..+...+..++|+|++++|++++.|+.|++||+
T Consensus 143 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~ 221 (312)
T 4ery_A 143 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDY 221 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred EEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 22222 234689999999999999998 4555554 456678999999999999999999999999999
Q ss_pred CCCceeeEEeccCccc---EEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 148 HQGHSRDIYHTKRMQH---VTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 148 ~~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
++++.+..+ .+|... +......+++++|++++.||.|++||+++++.+
T Consensus 222 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 222 SKGKCLKTY-TGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIV 272 (312)
T ss_dssp TTTEEEEEE-CSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEE
T ss_pred CCCcEEEEE-EecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhh
Confidence 999887776 455433 223333467889999999999999999988764
No 49
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.1e-33 Score=208.86 Aligned_cols=188 Identities=13% Similarity=0.090 Sum_probs=150.3
Q ss_pred cceeEEEECCC------CceEEEeeCCCeEEEEEccCCcee--------eeeee-eeecCceeeEEeCCCCCeEEEEecC
Q psy8758 2 QHVTHTVWSLD------NKFVISASDEMNLRVWKAHASEKL--------GPIRK-VVMSLRSNMVSWNPMEAFVFTAANE 66 (198)
Q Consensus 2 ~~v~~~~~s~~------~~~l~~~~~d~~i~i~~~~~~~~~--------~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~ 66 (198)
+.|.+++|+|+ +.+||+++.||+|++||+..+... ..... ..|...|.+++|+|++ .| ++|+.
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~l-asgs~ 285 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TV-VCGFK 285 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EE-EEEET
T ss_pred CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eE-EEEeC
Confidence 46899999997 579999999999999999766421 01111 1256789999999864 54 45789
Q ss_pred CccEEEEeccCCCCc---ccc------------cc-C-ceEEEecCCCcEEEEEccCCCcceeeecCCCc--ceEEEEEc
Q psy8758 67 DFNLYSYDIRQLNSP---LNV------------HK-D-MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS--AVTSVDYS 127 (198)
Q Consensus 67 d~~i~~~d~~~~~~~---~~~------------~~-~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~i~~~~~s 127 (198)
||+|++||+++...+ +.. .. + .++++++.|++|++||+++ .+....+.+|.. .+.+++|+
T Consensus 286 DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~-~~~~~~~~~~~~~~~v~~v~fs 364 (524)
T 2j04_B 286 NGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD-IATTKTTVSRFRGSNLVPVVYC 364 (524)
T ss_dssp TSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG-HHHHCEEEEECSCCSCCCEEEE
T ss_pred CCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC-CCcccccccccccCcccceEeC
Confidence 999999999754211 111 12 2 5789999999999999997 555555655543 57899999
Q ss_pred cCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758 128 PTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS 193 (198)
Q Consensus 128 p~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~ 193 (198)
|+++.+++++.|++|++||++++.+...+ .+|...|++++|+|++++|++|+.||+|++||+..+
T Consensus 365 p~~~~l~s~~~d~tv~lwd~~~~~~~~~l-~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 365 PQIYSYIYSDGASSLRAVPSRAAFAVHPL-VSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR 429 (524)
T ss_dssp TTTTEEEEECSSSEEEEEETTCTTCCEEE-EECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS
T ss_pred CCcCeEEEeCCCCcEEEEECcccccceee-ecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh
Confidence 99999999999999999999998887666 579999999999999999999999999999998654
No 50
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-31 Score=193.19 Aligned_cols=191 Identities=16% Similarity=0.222 Sum_probs=158.9
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
++|++++|+|++++|++++.||.|++||+.+++....+.. |...|.+++|+|+++.++++ +.|+.|++||+.+....
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~s~-~~dg~i~iwd~~~~~~~ 109 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDG--HTGTIWSIDVDCFTKYCVTG-SADYSIKLWDVSNGQCV 109 (369)
T ss_dssp SCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEE-ETTTEEEEEETTTCCEE
T ss_pred ceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhh--cCCcEEEEEEcCCCCEEEEE-eCCCeEEEEECCCCcEE
Confidence 5799999999999999999999999999998887666654 57789999999999988775 68999999999865432
Q ss_pred cc------------cccCceEEEecCC-----CcEEEEEccCCC----------cceeeecCCCc--ceEEEEEccCCCE
Q psy8758 82 LN------------VHKDMTSAAANED-----FNLYSYDIRQLN----------SPLNVHKDMTS--AVTSVDYSPTGRE 132 (198)
Q Consensus 82 ~~------------~~~~~~~~~~~~~-----~~i~~~d~~~~~----------~~~~~~~~~~~--~i~~~~~sp~~~~ 132 (198)
.. ...+..+++++.+ +.+.+||+.... .+...+..|.. .+.+++|+|++++
T Consensus 110 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (369)
T 3zwl_B 110 ATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKY 189 (369)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCE
T ss_pred EEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCE
Confidence 11 1133567888888 999999998632 13444455555 8999999999999
Q ss_pred EEEeecCCcEEEEEcCC-CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 133 FVAGGYDKSLRLYLAHQ-GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 133 l~~~~~d~~v~v~d~~~-~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
|++++.|+.|++||+++ ++....+ ..|...|.+++|+|++++|++++.|+.|++||+++++.+
T Consensus 190 l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 190 IIAGHKDGKISKYDVSNNYEYVDSI-DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVL 253 (369)
T ss_dssp EEEEETTSEEEEEETTTTTEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEcCCCEEEEEECCCCcEeEEEE-ecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCcee
Confidence 99999999999999998 5655555 678899999999999999999999999999999988764
No 51
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=8.5e-32 Score=194.72 Aligned_cols=188 Identities=12% Similarity=0.080 Sum_probs=149.6
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
+.|++++|+|+|++|++|+.++ +++|++.+++.... . +...+..+++.++++.++.+++.|+.|++||..+....
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~ 94 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMS---Q-EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDV 94 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEE---E-ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEE
T ss_pred CceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeee---e-ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEE
Confidence 5789999999999999998775 78999876543222 1 12347788999999988877888899999998654311
Q ss_pred cc-----------------------------cccC------------------ceEEE--ecCCCcEEEEEccCCC----
Q psy8758 82 LN-----------------------------VHKD------------------MTSAA--ANEDFNLYSYDIRQLN---- 108 (198)
Q Consensus 82 ~~-----------------------------~~~~------------------~~~~~--~~~~~~i~~~d~~~~~---- 108 (198)
.. .... ..++. ++.+|.|++||+++..
T Consensus 95 ~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~ 174 (355)
T 3vu4_A 95 SRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATT 174 (355)
T ss_dssp EEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC------
T ss_pred EEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCcccc
Confidence 00 0000 12233 6889999999998632
Q ss_pred ----------cc-eeeecCCCcceEEEEEccCCCEEEEeecCCc-EEEEEcCCCceeeEEecc-CcccEEEEEEcCCCCE
Q psy8758 109 ----------SP-LNVHKDMTSAVTSVDYSPTGREFVAGGYDKS-LRLYLAHQGHSRDIYHTK-RMQHVTHTVWSLDNKF 175 (198)
Q Consensus 109 ----------~~-~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~-v~v~d~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~ 175 (198)
.+ +..+.+|...|.+++|+|+|++|++++.|++ |++||+++++.+..+..+ |...|.+++|+|++++
T Consensus 175 ~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~ 254 (355)
T 3vu4_A 175 QDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSK 254 (355)
T ss_dssp ------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCE
T ss_pred ccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCE
Confidence 12 6778899999999999999999999999998 999999999998888545 8899999999999999
Q ss_pred EEEecCCCeEEEEecCCCc
Q psy8758 176 VISASDEMNLRVWKAHASE 194 (198)
Q Consensus 176 l~~~~~dg~v~~w~~~~~~ 194 (198)
|++++.|+.|++||++++.
T Consensus 255 l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 255 LAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEEETTCEEEEEESSCCS
T ss_pred EEEEECCCEEEEEEccCCC
Confidence 9999999999999998654
No 52
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-33 Score=202.99 Aligned_cols=193 Identities=15% Similarity=0.232 Sum_probs=160.4
Q ss_pred cceeEEEECCC-CceEEEeeCCCeEEEEEccCCc------eeeeeee-eeecCceeeEEeCCCCCeEEEEecCCccEEEE
Q psy8758 2 QHVTHTVWSLD-NKFVISASDEMNLRVWKAHASE------KLGPIRK-VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSY 73 (198)
Q Consensus 2 ~~v~~~~~s~~-~~~l~~~~~d~~i~i~~~~~~~------~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~ 73 (198)
++|.+++|+|+ +++|++++.|+.|++||+.+++ ....+.. ..+...+.+++|+|++..++++++.|+.|++|
T Consensus 114 ~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iw 193 (416)
T 2pm9_A 114 SSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIW 193 (416)
T ss_dssp SCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEE
T ss_pred cceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEE
Confidence 57899999998 8999999999999999998775 3222211 23677899999999955555567899999999
Q ss_pred eccCCCCc--c----------------cccc--CceEEEecCCC---cEEEEEccCCCcceeeec-CCCcceEEEEEcc-
Q psy8758 74 DIRQLNSP--L----------------NVHK--DMTSAAANEDF---NLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSP- 128 (198)
Q Consensus 74 d~~~~~~~--~----------------~~~~--~~~~~~~~~~~---~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~sp- 128 (198)
|+++.... + ..++ ..++++++.++ .|++||+++...++..+. .|...+.+++|+|
T Consensus 194 d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~ 273 (416)
T 2pm9_A 194 DLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQ 273 (416)
T ss_dssp ETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSS
T ss_pred ECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCC
Confidence 99764321 1 1112 24789999998 999999998557777887 8999999999999
Q ss_pred CCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEecCCCcc
Q psy8758 129 TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 129 ~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
++++|++++.|+.|++||+++++.+..+ ..|...|.+++|+|++ ++|++++.||.|++||+.+++.
T Consensus 274 ~~~~l~s~~~dg~v~~wd~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 274 DEHLLLSSGRDNTVLLWNPESAEQLSQF-PARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp CSSCEEEEESSSEEEEECSSSCCEEEEE-ECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred CCCeEEEEeCCCCEEEeeCCCCccceee-cCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 8999999999999999999999888877 5788999999999998 8999999999999999987664
No 53
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.5e-32 Score=211.33 Aligned_cols=188 Identities=18% Similarity=0.212 Sum_probs=158.5
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS- 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~- 80 (198)
+.|.+++|+|++++|++|+.|+.|++||+.+++....+.. |...|.+++|+|+++.+++ ++.|+.|++||......
T Consensus 431 ~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s-~s~D~~i~iwd~~~~~~~ 507 (694)
T 3dm0_A 431 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVG--HTKDVLSVAFSLDNRQIVS-ASRDRTIKLWNTLGECKY 507 (694)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEECTTSSCEEE-EETTSCEEEECTTSCEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeC--CCCCEEEEEEeCCCCEEEE-EeCCCEEEEEECCCCcce
Confidence 4689999999999999999999999999998876666544 5788999999999999876 46999999999753211
Q ss_pred ----ccccc----------c---CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEE
Q psy8758 81 ----PLNVH----------K---DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLR 143 (198)
Q Consensus 81 ----~~~~~----------~---~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~ 143 (198)
....| . ...+++++.|+.|++||+++ .+....+.+|...|++++|+|++++|++++.|+.|+
T Consensus 508 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~ 586 (694)
T 3dm0_A 508 TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN-CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVL 586 (694)
T ss_dssp EECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCE
T ss_pred eeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC-CcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE
Confidence 01112 1 24689999999999999998 677888899999999999999999999999999999
Q ss_pred EEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 144 LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 144 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+||+++++.+..+ .+...+.+++|+|++.+|++++ ++.|++||+++++.+
T Consensus 587 iwd~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 587 LWDLAEGKKLYSL--EANSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIV 636 (694)
T ss_dssp EEETTTTEEEECC--BCSSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEECCCCceEEEe--cCCCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCCh
Confidence 9999999887665 3447899999999999888765 567999999987754
No 54
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2e-31 Score=190.55 Aligned_cols=189 Identities=14% Similarity=0.217 Sum_probs=160.2
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeee---eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRK---VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL 78 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~ 78 (198)
++|.+++|+|+++++++++ ||.|++|++.+++....+.. ..+...+.+++|+|+++.++++ +.|+.|++||++..
T Consensus 52 ~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~ 129 (337)
T 1gxr_A 52 EVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVG-GEASTLSIWDLAAP 129 (337)
T ss_dssp SCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEE-ESSSEEEEEECCCC
T ss_pred CceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEE-cCCCcEEEEECCCC
Confidence 5789999999999999998 99999999987754433332 2367889999999999988774 68999999999865
Q ss_pred CC----ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEE
Q psy8758 79 NS----PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLR 143 (198)
Q Consensus 79 ~~----~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~ 143 (198)
.. .+..| .+..+++++.|+.|++||+++ .+.+..+..|...+.+++|+|++++|++++.|+.|+
T Consensus 130 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 208 (337)
T 1gxr_A 130 TPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVR 208 (337)
T ss_dssp --EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC-CceeeeeecccCceEEEEECCCCCEEEEEecCCcEE
Confidence 42 11122 235688999999999999998 678888888999999999999999999999999999
Q ss_pred EEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 144 LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 144 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
+||+++++....+ .+...+.+++|+|++++|++++.|+.|++||+++++.
T Consensus 209 ~~d~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~ 258 (337)
T 1gxr_A 209 SWDLREGRQLQQH--DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp EEETTTTEEEEEE--ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE
T ss_pred EEECCCCceEeee--cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe
Confidence 9999999887765 4567899999999999999999999999999988764
No 55
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.9e-32 Score=209.94 Aligned_cols=192 Identities=19% Similarity=0.240 Sum_probs=156.3
Q ss_pred cceeEEEECCCC-ceEEEeeCCCeEEEEEccCCcee--eee-eeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEKL--GPI-RKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~--~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~ 77 (198)
+.|++++|+|++ ++|++|+.|+.|++|++...... ... ....|...|.+++|+|+++.+++ |+.|+.|++||+.+
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s-gs~Dg~v~vwd~~~ 461 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALS-GSWDGELRLWDLAA 461 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEE-EETTSEEEEEETTT
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEE-EeCCCcEEEEECCC
Confidence 579999999865 79999999999999999754321 111 12236888999999999998876 56999999999976
Q ss_pred CCC--cccccc-----------CceEEEecCCCcEEEEEccCCCcceee---ecCCCcceEEEEEccCC--CEEEEeecC
Q psy8758 78 LNS--PLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNV---HKDMTSAVTSVDYSPTG--REFVAGGYD 139 (198)
Q Consensus 78 ~~~--~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~~i~~~~~sp~~--~~l~~~~~d 139 (198)
... .+..|. +..+++++.|++|++||+.. ...... ..+|...|.+++|+|++ ..+++++.|
T Consensus 462 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d 540 (694)
T 3dm0_A 462 GVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLG-ECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD 540 (694)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS-CEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT
T ss_pred CcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCC-CcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC
Confidence 542 233343 34689999999999999875 222222 24688899999999987 589999999
Q ss_pred CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 140 KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 140 ~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+.|++||+++++....+ .+|...|.+++|+|++++|++++.||.|++||+.+++++
T Consensus 541 ~~v~vwd~~~~~~~~~~-~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~ 596 (694)
T 3dm0_A 541 KTVKVWNLSNCKLRSTL-AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKL 596 (694)
T ss_dssp SCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEE
T ss_pred CeEEEEECCCCcEEEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 99999999998887776 689999999999999999999999999999999998765
No 56
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.5e-32 Score=203.55 Aligned_cols=193 Identities=14% Similarity=0.126 Sum_probs=142.7
Q ss_pred cceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-
Q psy8758 2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN- 79 (198)
Q Consensus 2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~- 79 (198)
++|++++|+| ++++|++++.||+|++||+.++..........+...+.+++|+|++..+++ |+.|+.|++||++...
T Consensus 165 ~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-g~~dg~i~~wd~~~~~~ 243 (435)
T 4e54_B 165 GSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVT-GDNVGNVILLNMDGKEL 243 (435)
T ss_dssp CCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEE-ECSSSBEEEEESSSCBC
T ss_pred CCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEE-EeCCCcEeeeccCccee
Confidence 5799999998 689999999999999999976543222222224456789999999998876 5799999999987432
Q ss_pred Cccccc------------cCceEEEecCCCcEEEEEccCCCc--ceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEE
Q psy8758 80 SPLNVH------------KDMTSAAANEDFNLYSYDIRQLNS--PLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLY 145 (198)
Q Consensus 80 ~~~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~ 145 (198)
..+..| ...++++++.|+.|++||+++... .+....+|...|++++|+|+|++|++++.|+.|++|
T Consensus 244 ~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iw 323 (435)
T 4e54_B 244 WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVY 323 (435)
T ss_dssp CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEE
T ss_pred EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEE
Confidence 222233 234688999999999999987322 223335789999999999999999999999999999
Q ss_pred EcCCCceee------------------------------------------------------------EEeccCcccEE
Q psy8758 146 LAHQGHSRD------------------------------------------------------------IYHTKRMQHVT 165 (198)
Q Consensus 146 d~~~~~~~~------------------------------------------------------------~~~~~~~~~v~ 165 (198)
|+.++.... .+..+|...|.
T Consensus 324 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~ 403 (435)
T 4e54_B 324 SASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGIS 403 (435)
T ss_dssp ESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCC
T ss_pred ECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEE
Confidence 987532211 11123445566
Q ss_pred EE-EEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 166 HT-VWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 166 ~~-~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
++ +|+|+|++|++|+ |+.|++|++++++..
T Consensus 404 s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 404 SLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp CEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred EEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 66 6999999999876 889999999998864
No 57
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.8e-32 Score=198.63 Aligned_cols=190 Identities=12% Similarity=0.151 Sum_probs=156.0
Q ss_pred cceeEEEEC----CCCce-EEEeeCCCeEEEEEccC------Cceee-----eeee-----eeecCceeeEEeCCCCCeE
Q psy8758 2 QHVTHTVWS----LDNKF-VISASDEMNLRVWKAHA------SEKLG-----PIRK-----VVMSLRSNMVSWNPMEAFV 60 (198)
Q Consensus 2 ~~v~~~~~s----~~~~~-l~~~~~d~~i~i~~~~~------~~~~~-----~~~~-----~~~~~~v~~~~~~~~~~~~ 60 (198)
+.|.+++|+ |++++ |++++.||.|++||+.+ ++... .+.. ..+...+.+++|+|++ .+
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l 200 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LI 200 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EE
T ss_pred CcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eE
Confidence 579999999 99999 99999999999999987 55444 4432 3357789999999999 55
Q ss_pred EEEecCCccEEEEeccCCCC--cccc---c--------------cCceEEEecCC---CcEEEEEccCCCcceeeecC--
Q psy8758 61 FTAANEDFNLYSYDIRQLNS--PLNV---H--------------KDMTSAAANED---FNLYSYDIRQLNSPLNVHKD-- 116 (198)
Q Consensus 61 ~~~~~~d~~i~~~d~~~~~~--~~~~---~--------------~~~~~~~~~~~---~~i~~~d~~~~~~~~~~~~~-- 116 (198)
+ +++.|+.|++||+++... .+.. | .+..+++++.| +.|++||+++ .+++..+..
T Consensus 201 ~-~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~-~~~~~~~~~~~ 278 (397)
T 1sq9_A 201 A-TGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF-GERIGSLSVPT 278 (397)
T ss_dssp E-EECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT-CCEEEEECBC-
T ss_pred E-EEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCC-CcccceeccCc
Confidence 5 567999999999985432 2222 2 23468899999 9999999998 677888887
Q ss_pred -----------CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEec-----cC---------------cccEE
Q psy8758 117 -----------MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHT-----KR---------------MQHVT 165 (198)
Q Consensus 117 -----------~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~-----~~---------------~~~v~ 165 (198)
|...+.+++|+|++++|++++.|+.|++||+++++.+..+.. .| ...|.
T Consensus 279 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~ 358 (397)
T 1sq9_A 279 HSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVF 358 (397)
T ss_dssp -------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEE
T ss_pred ccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCcee
Confidence 899999999999999999999999999999999998887741 55 88999
Q ss_pred EEEEcCCC----------CEEEEecCCCeEEEEecCCCc
Q psy8758 166 HTVWSLDN----------KFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 166 ~~~~s~~~----------~~l~~~~~dg~v~~w~~~~~~ 194 (198)
+++|+|++ ++|++++.||.|++|++++|+
T Consensus 359 ~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 359 DVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp EEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred EEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 99999998 799999999999999999874
No 58
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.8e-31 Score=194.23 Aligned_cols=190 Identities=15% Similarity=0.258 Sum_probs=149.4
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeee---------------------------------------e
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRK---------------------------------------V 42 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~---------------------------------------~ 42 (198)
+.|++++|+|+|++|++|+.||.|++||+.+++.+..+.. .
T Consensus 148 ~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~ 227 (420)
T 4gga_A 148 EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLS 227 (420)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEec
Confidence 3599999999999999999999999999987765433321 1
Q ss_pred eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc------cccc------------cCceEE--EecCCCcEEEE
Q psy8758 43 VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP------LNVH------------KDMTSA--AANEDFNLYSY 102 (198)
Q Consensus 43 ~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~------~~~~------------~~~~~~--~~~~~~~i~~~ 102 (198)
.|...+..+.|+|++..+++. +.|+.+++|+....... ...| ...+++ +|+.|+.|++|
T Consensus 228 ~h~~~~~~~~~~~~g~~l~s~-~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iw 306 (420)
T 4gga_A 228 GHSQEVCGLRWAPDGRHLASG-GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 306 (420)
T ss_dssp CCSSCEEEEEECTTSSEEEEE-ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEE
T ss_pred ccccceeeeeecCCCCeeeee-eccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEE
Confidence 134556777888888877664 57888888887654321 1111 223344 45689999999
Q ss_pred EccCCCcceeeecCCCcceEEEEEccCCCEEEEee--cCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEec
Q psy8758 103 DIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG--YDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS 180 (198)
Q Consensus 103 d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 180 (198)
|+.+ +.....+.. ...+.++.|+|+++.+++++ .|+.|++||+.+++++..+ .+|...|++++|+|||++|++++
T Consensus 307 d~~t-~~~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l-~gH~~~V~~l~~spdg~~l~S~s 383 (420)
T 4gga_A 307 NVCS-GACLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL-KGHTSRVLSLTMSPDGATVASAA 383 (420)
T ss_dssp ETTT-TEEEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE-CCCSSCEEEEEECTTSSCEEEEE
T ss_pred eCCc-cccceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEE-cCCCCCEEEEEEcCCCCEEEEEe
Confidence 9998 667666664 45688999999999888765 6899999999999998887 78999999999999999999999
Q ss_pred CCCeEEEEecCCCcc
Q psy8758 181 DEMNLRVWKAHASEK 195 (198)
Q Consensus 181 ~dg~v~~w~~~~~~~ 195 (198)
.|++|++||+.+.++
T Consensus 384 ~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 384 ADETLRLWRCFELDP 398 (420)
T ss_dssp TTTEEEEECCSCSSC
T ss_pred cCCeEEEEECCCCCc
Confidence 999999999976543
No 59
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=5.3e-32 Score=199.28 Aligned_cols=188 Identities=11% Similarity=0.135 Sum_probs=155.0
Q ss_pred eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--c
Q psy8758 4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--P 81 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--~ 81 (198)
+....|+|++++|++++.|+.|++||+.+++....+. .|...|.+++|+|+++.+++ ++.|+.|++||+++... .
T Consensus 100 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~l~s-~s~d~~i~iwd~~~~~~~~~ 176 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ--AHVSEITKLKFFPSGEALIS-SSQDMQLKIWSVKDGSNPRT 176 (420)
T ss_dssp EEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT--SSSSCEEEEEECTTSSEEEE-EETTSEEEEEETTTCCCCEE
T ss_pred eEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc--cccCccEEEEECCCCCEEEE-EeCCCeEEEEeCCCCcCceE
Confidence 3455789999999999999999999998776544433 36788999999999998876 56999999999986543 2
Q ss_pred ccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecC---CC---------------------cceEEEEE
Q psy8758 82 LNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKD---MT---------------------SAVTSVDY 126 (198)
Q Consensus 82 ~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~---------------------~~i~~~~~ 126 (198)
+..|. +..+++++.|+.|++||+++ ++.+..+.. +. ..+.+++|
T Consensus 177 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~ 255 (420)
T 3vl1_A 177 LIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGT-GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEF 255 (420)
T ss_dssp EECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT-TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCS
T ss_pred EcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCC-CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEE
Confidence 33333 34689999999999999998 566666653 23 34455566
Q ss_pred ccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecCCCcc
Q psy8758 127 SPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 127 sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~~~~ 195 (198)
+|++++|++++.|+.|++||+++++....+...|...|.+++|+|+++ +|++++.||.|++||+++++.
T Consensus 256 s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 256 GTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp SCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred cCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 889999999999999999999999888877677889999999999998 999999999999999998754
No 60
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-31 Score=193.82 Aligned_cols=191 Identities=14% Similarity=0.197 Sum_probs=154.3
Q ss_pred cceeEEEECCC--CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSLD--NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~ 77 (198)
++|.+++|+|+ +++|++++.||.|++||+.+++.........+...+.+++|+|+ +..+++ ++.|+.|++||++.
T Consensus 56 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~-~~~d~~i~v~d~~~ 134 (379)
T 3jrp_A 56 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV-ASSDGKVSVVEFKE 134 (379)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE-EETTSEEEEEECCT
T ss_pred CcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEE-ecCCCcEEEEecCC
Confidence 57999999987 89999999999999999988763222222236788999999999 777776 46999999999986
Q ss_pred CCCc--------------cccc--------------cCceEEEecCCCcEEEEEccCCC---cceeeecCCCcceEEEEE
Q psy8758 78 LNSP--------------LNVH--------------KDMTSAAANEDFNLYSYDIRQLN---SPLNVHKDMTSAVTSVDY 126 (198)
Q Consensus 78 ~~~~--------------~~~~--------------~~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~i~~~~~ 126 (198)
.... +..+ .+..+++++.|+.|++||++... .....+..|...|.+++|
T Consensus 135 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
T 3jrp_A 135 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 214 (379)
T ss_dssp TSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEE
Confidence 5311 1112 25689999999999999998633 234566789999999999
Q ss_pred ccC---CCEEEEeecCCcEEEEEcCCCceee--EE--eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758 127 SPT---GREFVAGGYDKSLRLYLAHQGHSRD--IY--HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS 193 (198)
Q Consensus 127 sp~---~~~l~~~~~d~~v~v~d~~~~~~~~--~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~ 193 (198)
+|+ +++|++++.|+.|++||++++.... .. ...|...|.+++|+|++++|++++.||.|++|++.++
T Consensus 215 sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 215 SPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp CCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred CCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 999 8999999999999999999874221 11 2347789999999999999999999999999999853
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.5e-31 Score=196.23 Aligned_cols=191 Identities=14% Similarity=0.255 Sum_probs=155.1
Q ss_pred cceeEEEECC-CCceEEEeeCCCeEEEEEccCCc-------eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEE
Q psy8758 2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASE-------KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSY 73 (198)
Q Consensus 2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~ 73 (198)
++|++++|+| ++++|++++.||.|++||+.++. ....+. .|...|.+++|+|+++.++++++.|+.|++|
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 159 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLE--GHTKRVGIVAWHPTAQNVLLSAGCDNVILVW 159 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEE--CCSSCEEEEEECSSBTTEEEEEETTSCEEEE
T ss_pred CCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEec--CCCCeEEEEEECcCCCCEEEEEcCCCEEEEE
Confidence 5799999999 99999999999999999998773 233333 2678899999999986455556799999999
Q ss_pred eccCCCCc--c--cccc-----------CceEEEecCCCcEEEEEccCCCcceeee-cCCCcc-eEEEEEccCCCEEEEe
Q psy8758 74 DIRQLNSP--L--NVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSA-VTSVDYSPTGREFVAG 136 (198)
Q Consensus 74 d~~~~~~~--~--~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~-i~~~~~sp~~~~l~~~ 136 (198)
|+++.... + ..|. +..+++++.|+.|++||+++ ++.+..+ ..|... +.+++|+|++++|+++
T Consensus 160 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 238 (402)
T 2aq5_A 160 DVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRK-GTVVAEKDRPHEGTRPVHAVFVSEGKILTTG 238 (402)
T ss_dssp ETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTT-TEEEEEEECSSCSSSCCEEEECSTTEEEEEE
T ss_pred ECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCC-CceeeeeccCCCCCcceEEEEcCCCcEEEEe
Confidence 99865432 2 2232 34689999999999999998 6777777 677765 8999999999999999
Q ss_pred ---ecCCcEEEEEcCCCce-eeEEeccCcccEEEEEEcCCCCEEE-EecCCCeEEEEecCCCcc
Q psy8758 137 ---GYDKSLRLYLAHQGHS-RDIYHTKRMQHVTHTVWSLDNKFVI-SASDEMNLRVWKAHASEK 195 (198)
Q Consensus 137 ---~~d~~v~v~d~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~v~~w~~~~~~~ 195 (198)
+.|+.|++||+++++. .......|...+..++|+|++++|+ +++.||.|++||+.+++.
T Consensus 239 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 239 FSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp ECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred ccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 7899999999998765 3344346678899999999999886 556799999999998873
No 62
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.3e-31 Score=187.36 Aligned_cols=190 Identities=16% Similarity=0.238 Sum_probs=157.1
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS- 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~- 80 (198)
..|.+++|+|+++++++++.|+.|++||+.+++.........+...+.+++|+|+++.++++ +.|+.|++||+++...
T Consensus 98 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~v~~~d~~~~~~~ 176 (337)
T 1gxr_A 98 NYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSC-CSDGNIAVWDLHNQTLV 176 (337)
T ss_dssp SBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEE-ETTSCEEEEETTTTEEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEE-eCCCcEEEEeCCCCcee
Confidence 46899999999999999999999999999887633333333367789999999999988764 6899999999976532
Q ss_pred -ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758 81 -PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH 148 (198)
Q Consensus 81 -~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~ 148 (198)
.+..| .+..+++++.|+.|++||+++ .+.+..+. +...+.+++|+|+++++++++.++.|++||++
T Consensus 177 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~-~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~ 254 (337)
T 1gxr_A 177 RQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE-GRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVN 254 (337)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-TEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCC-CceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 12222 234688999999999999998 55555553 67889999999999999999999999999999
Q ss_pred CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+++.... ..|...|.+++|+|++++|++++.||.|++||+.+++.+
T Consensus 255 ~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~ 300 (337)
T 1gxr_A 255 KPDKYQL--HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 300 (337)
T ss_dssp SSCEEEE--CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCeEEE--cCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEE
Confidence 9876543 578899999999999999999999999999999988764
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-31 Score=191.59 Aligned_cols=190 Identities=12% Similarity=0.201 Sum_probs=154.1
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCC--ceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS--EKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~ 77 (198)
++|++++|+|++++|++++.||.|++|++..+ +....+. .|...|.+++|+|+ +..+++ ++.|+.|++||+..
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~l~s-~~~dg~v~iwd~~~ 88 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTILAS-CSYDGKVLIWKEEN 88 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCGGGCSEEEE-EETTSCEEEEEEET
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEec--CCCCcEEEEEeCCCCCCCEEEE-eccCCEEEEEEcCC
Confidence 57999999999999999999999999999743 3223332 36788999999987 777766 56899999999986
Q ss_pred CC----Cccc----------ccc---CceEEEecCCCcEEEEEccCCC-cceeeecCCCcceEEEEEcc-----------
Q psy8758 78 LN----SPLN----------VHK---DMTSAAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSP----------- 128 (198)
Q Consensus 78 ~~----~~~~----------~~~---~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~sp----------- 128 (198)
.. ..+. .++ +..+++++.|+.|++||++... .....+..|...+.+++|+|
T Consensus 89 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 168 (379)
T 3jrp_A 89 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 168 (379)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---------
T ss_pred CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccC
Confidence 53 1111 111 4679999999999999998732 33445678999999999999
Q ss_pred --CCCEEEEeecCCcEEEEEcCCCceee---EEeccCcccEEEEEEcCC---CCEEEEecCCCeEEEEecCCCc
Q psy8758 129 --TGREFVAGGYDKSLRLYLAHQGHSRD---IYHTKRMQHVTHTVWSLD---NKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 129 --~~~~l~~~~~d~~v~v~d~~~~~~~~---~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
+++++++++.|+.|++||++.+.... ....+|...|.+++|+|+ +++|++++.||.|++||+++++
T Consensus 169 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 169 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp -CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred CCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 69999999999999999998765321 123678899999999999 8999999999999999999863
No 64
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-32 Score=198.30 Aligned_cols=190 Identities=13% Similarity=0.274 Sum_probs=156.4
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCC----ceeeeeeeeeecCceeeEEeCCC-CCeEEEEecCCccEEEEecc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS----EKLGPIRKVVMSLRSNMVSWNPM-EAFVFTAANEDFNLYSYDIR 76 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~d~~i~~~d~~ 76 (198)
+.|.+++|+|++++|++++.||.|++|++.+. +....+. .|...|.+++|+|+ +..+++ ++.|+.|++||++
T Consensus 68 ~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~l~s-~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFS--NHSSSVKTVKFNAKQDNVLAS-GGNNGEIFIWDMN 144 (416)
T ss_dssp SCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECC--CSSSCCCEEEECSSSTTBEEE-ECSSSCEEBCBTT
T ss_pred CceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhcc--CCccceEEEEEcCCCCCEEEE-EcCCCeEEEEECC
Confidence 46899999999999999999999999999872 2333333 36788999999998 566554 6799999999998
Q ss_pred CCC------Ccc-----cccc------------CceEEEecCCCcEEEEEccCCCcceeeecCC------CcceEEEEEc
Q psy8758 77 QLN------SPL-----NVHK------------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDM------TSAVTSVDYS 127 (198)
Q Consensus 77 ~~~------~~~-----~~~~------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~------~~~i~~~~~s 127 (198)
... ..+ ..|. ...+++++.|+.|++||+++ .+.+..+..+ ...+.+++|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~ 223 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKA-KKEVIHLSYTSPNSGIKQQLSVVEWH 223 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTT-TEEEEEECCCCCSSCCCCCEEEEEEC
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC-CCcceEEeccccccccCCceEEEEEC
Confidence 664 221 1121 35799999999999999998 6777777665 7889999999
Q ss_pred cCC-CEEEEeecCC---cEEEEEcCCC-ceeeEEec-cCcccEEEEEEcC-CCCEEEEecCCCeEEEEecCCCccc
Q psy8758 128 PTG-REFVAGGYDK---SLRLYLAHQG-HSRDIYHT-KRMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 128 p~~-~~l~~~~~d~---~v~v~d~~~~-~~~~~~~~-~~~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
|++ .++++++.|+ .|++||++++ .....+ . +|...|.+++|+| ++++|++++.||.|++||+++++++
T Consensus 224 ~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~ 298 (416)
T 2pm9_A 224 PKNSTRVATATGSDNDPSILIWDLRNANTPLQTL-NQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQL 298 (416)
T ss_dssp SSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCC-CSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEE
T ss_pred CCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEe-ecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccc
Confidence 997 5899999998 9999999987 444444 4 7889999999999 8999999999999999999988765
No 65
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.5e-31 Score=192.61 Aligned_cols=188 Identities=13% Similarity=0.147 Sum_probs=159.3
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS- 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~- 80 (198)
+.|.+++|+|++++|++++.|+.|++||+.+++.........+...+.+++|+|+++.++++ +.|+.+++||++....
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~v~i~d~~~~~~~ 131 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVG-SGSRVISICYFEQENDW 131 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEE-ETTSSEEEEEEETTTTE
T ss_pred CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEE-eCCCEEEEEEecCCCcc
Confidence 46899999999999999999999999999887655454444567889999999999988775 6899999999986542
Q ss_pred ----cc-ccc-----------cCceEEEecCCCcEEEEEcc-----------------CCCcceeeecCCCcceEEEEEc
Q psy8758 81 ----PL-NVH-----------KDMTSAAANEDFNLYSYDIR-----------------QLNSPLNVHKDMTSAVTSVDYS 127 (198)
Q Consensus 81 ----~~-~~~-----------~~~~~~~~~~~~~i~~~d~~-----------------~~~~~~~~~~~~~~~i~~~~~s 127 (198)
.. ..| .+..+++++.|+.+++||++ .....+..+..|...+.+++|+
T Consensus 132 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 211 (372)
T 1k8k_C 132 WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS 211 (372)
T ss_dssp EEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC
T ss_pred eeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC
Confidence 11 112 23468999999999999964 1256777788899999999999
Q ss_pred cCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758 128 PTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 192 (198)
Q Consensus 128 p~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~ 192 (198)
|++++|++++.|+.|++||+++++.+..+ ..|...|.+++|+|++++|+++ .|+.|++|++.+
T Consensus 212 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 212 ANGSRVAWVSHDSTVCLADADKKMAVATL-ASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp SSSSEEEEEETTTEEEEEEGGGTTEEEEE-ECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CCCCEEEEEeCCCEEEEEECCCCceeEEE-ccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 99999999999999999999999988877 5777899999999999988887 899999999987
No 66
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-31 Score=194.50 Aligned_cols=187 Identities=17% Similarity=0.332 Sum_probs=161.3
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-- 80 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-- 80 (198)
.|++++|+|++++|++++.||.|++|| .+++....+.. |...|.+++|+|+++.++++ +.|+.+++||+++...
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNF--HRAPIVSVKWNKDGTHIISM-DVENVTILWNVISGTVMQ 185 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECC--CCSCEEEEEECTTSSEEEEE-ETTCCEEEEETTTTEEEE
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccC--CCccEEEEEECCCCCEEEEE-ecCCeEEEEECCCCcEEE
Confidence 799999999999999999999999999 45555555543 57789999999999988875 6899999999975431
Q ss_pred -------------------------ccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEE
Q psy8758 81 -------------------------PLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA 135 (198)
Q Consensus 81 -------------------------~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~ 135 (198)
.+...++..+++++.++.|++||++. .+++..+..|...+.+++|+|++++|++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 264 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITE-KTPTGKLIGHHGPISVLEFNDTNKLLLS 264 (425)
T ss_dssp EECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTC-SSCSEEECCCSSCEEEEEEETTTTEEEE
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCC-CceeeeeccCCCceEEEEECCCCCEEEE
Confidence 11223345689999999999999998 6788888899999999999999999999
Q ss_pred eecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 136 GGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 136 ~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
++.|+.|++||+++++....+ ..|...|.+++|+|++ ++++++.|+.|++||+++++.+
T Consensus 265 ~~~d~~i~i~d~~~~~~~~~~-~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 265 ASDDGTLRIWHGGNGNSQNCF-YGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLL 323 (425)
T ss_dssp EETTSCEEEECSSSBSCSEEE-CCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEE
T ss_pred EcCCCEEEEEECCCCccceEe-cCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEe
Confidence 999999999999998887776 5788999999999999 9999999999999999988764
No 67
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.2e-31 Score=195.97 Aligned_cols=191 Identities=14% Similarity=0.192 Sum_probs=158.8
Q ss_pred cceeEEEECCC----C---ceEEEeeCCCeEEEEEccCCce-----eeeeeeeee---cCceeeEEeC----CCCCe-EE
Q psy8758 2 QHVTHTVWSLD----N---KFVISASDEMNLRVWKAHASEK-----LGPIRKVVM---SLRSNMVSWN----PMEAF-VF 61 (198)
Q Consensus 2 ~~v~~~~~s~~----~---~~l~~~~~d~~i~i~~~~~~~~-----~~~~~~~~~---~~~v~~~~~~----~~~~~-~~ 61 (198)
++|.+++|+|+ + ++|++++.|+.|++|++.+++. ...+..+.. ...|.+++|+ |+++. ++
T Consensus 63 ~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~ 142 (397)
T 1sq9_A 63 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLV 142 (397)
T ss_dssp TCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEE
T ss_pred CcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEE
Confidence 57899999999 9 9999999999999999988765 444443311 3789999999 99998 66
Q ss_pred EEecCCccEEEEeccC------CCC-------ccc-------cc-----------cCceEEEecCCCcEEEEEccCCCcc
Q psy8758 62 TAANEDFNLYSYDIRQ------LNS-------PLN-------VH-----------KDMTSAAANEDFNLYSYDIRQLNSP 110 (198)
Q Consensus 62 ~~~~~d~~i~~~d~~~------~~~-------~~~-------~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~ 110 (198)
+ ++.|+.|++||++. ... .+. .| .+ .+++++.|+.|++||+++ .++
T Consensus 143 ~-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~ 219 (397)
T 1sq9_A 143 A-TDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELST-LRP 219 (397)
T ss_dssp E-EETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTT-TEE
T ss_pred E-EeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCC-Cce
Confidence 5 57899999999987 322 221 11 23 789999999999999998 678
Q ss_pred eeeecC---C---CcceEEEEEccCCCEEEEeecC---CcEEEEEcCCCceeeEEecc-------------CcccEEEEE
Q psy8758 111 LNVHKD---M---TSAVTSVDYSPTGREFVAGGYD---KSLRLYLAHQGHSRDIYHTK-------------RMQHVTHTV 168 (198)
Q Consensus 111 ~~~~~~---~---~~~i~~~~~sp~~~~l~~~~~d---~~v~v~d~~~~~~~~~~~~~-------------~~~~v~~~~ 168 (198)
+..+.. | ...+.+++|+|++++|++++.| +.|++||+++++.+..+ .. |...|.+++
T Consensus 220 ~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~ 298 (397)
T 1sq9_A 220 LYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSL-SVPTHSSQASLGEFAHSSWVMSLS 298 (397)
T ss_dssp EEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEE-CBC--------CCBSBSSCEEEEE
T ss_pred eEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCccccee-ccCcccccccccccccCCcEEEEE
Confidence 888888 8 8999999999999999999999 99999999999888777 45 889999999
Q ss_pred EcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 169 WSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 169 ~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
|+|++++|++++.||.|++||+++++.+
T Consensus 299 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 326 (397)
T 1sq9_A 299 FNDSGETLCSAGWDGKLRFWDVKTKERI 326 (397)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTTEEE
T ss_pred ECCCCCEEEEEeCCCeEEEEEcCCCcee
Confidence 9999999999999999999999988764
No 68
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.7e-31 Score=200.88 Aligned_cols=185 Identities=22% Similarity=0.340 Sum_probs=154.6
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-C
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-S 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-~ 80 (198)
.+|.+++|+|+++++++++.|+.+++|+. +++....+.. |...|.+++|+|++++++++ +.|+.|++||..... .
T Consensus 345 ~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~--~~~~v~~~~~s~dg~~l~~~-~~d~~v~~~~~~~~~~~ 420 (577)
T 2ymu_A 345 SSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG--HSSSVRGVAFSPDGQTIASA-SDDKTVKLWNRNGQLLQ 420 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEEC--CSSCEEEEEECTTSSCEEEE-ETTSEEEEECTTCCEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecC--CCCCeEEEEECCCCCEEEEE-eCCCEEEEEeCCCCEEE
Confidence 46889999999999999999999999996 4555555443 57789999999999998774 689999999964321 1
Q ss_pred ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758 81 PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ 149 (198)
Q Consensus 81 ~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~ 149 (198)
.+..| .+..+++++.|+.|++||+. .+.+..+..|...+.+++|+|++++|++++.|+.|++||. +
T Consensus 421 ~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~--~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~ 497 (577)
T 2ymu_A 421 TLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-N 497 (577)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT--SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-T
T ss_pred EecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECC--CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-C
Confidence 12222 33578999999999999975 4778888899999999999999999999999999999995 5
Q ss_pred CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
++.+..+ .+|...|++++|+|++++|++++.||.|++||. ++++
T Consensus 498 ~~~~~~~-~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~ 541 (577)
T 2ymu_A 498 GQLLQTL-TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQL 541 (577)
T ss_dssp SCEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCE
T ss_pred CCEEEEE-eCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCE
Confidence 6666665 688999999999999999999999999999996 4544
No 69
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-31 Score=196.00 Aligned_cols=192 Identities=15% Similarity=0.150 Sum_probs=156.3
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCc---eeeeeeee------------------------------------
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE---KLGPIRKV------------------------------------ 42 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~---~~~~~~~~------------------------------------ 42 (198)
.++.+++|+|+|++++++ .++.|++||+.+++ .+..+...
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 468999999999966655 57799999999887 33333211
Q ss_pred ----------------eecCceeeEEeCCCCCeEEEEecCCccEEEEecc--CCCCc--cc--cc-----------cCce
Q psy8758 43 ----------------VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR--QLNSP--LN--VH-----------KDMT 89 (198)
Q Consensus 43 ----------------~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~--~~~~~--~~--~~-----------~~~~ 89 (198)
.+...|.+++|+|+++.++++++.|+.|++||+. ..... +. .+ .+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 1122589999999999986777899999999998 43321 11 11 2346
Q ss_pred EEEecCCCcEEEEEccCCCcc----eeeecCCCcceEEEEEccC---CCEEEEeecCCcEEEEEcCCCceeeEEeccCcc
Q psy8758 90 SAAANEDFNLYSYDIRQLNSP----LNVHKDMTSAVTSVDYSPT---GREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQ 162 (198)
Q Consensus 90 ~~~~~~~~~i~~~d~~~~~~~----~~~~~~~~~~i~~~~~sp~---~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~ 162 (198)
+++++.++.+++|++.+ ... ...+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.+..+..+|..
T Consensus 164 l~~~~~~g~v~~~~~~~-~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINS-IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEETTSEEEEEETTS-CCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEeCCCcEEEEecCC-cccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 88999999999999987 333 3367789999999999999 999999999999999999999888776678999
Q ss_pred cEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 163 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 163 ~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
.|.+++|+ ++++|++++.|+.|++||+++++++
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNL 275 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEEEEEETTTCCEE
T ss_pred ceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEe
Confidence 99999999 9999999999999999999998864
No 70
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.8e-30 Score=193.61 Aligned_cols=186 Identities=17% Similarity=0.230 Sum_probs=159.0
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCC--CCCeEEEEecCCccEEEEeccCCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNP--MEAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
++|.+++|+|++ .+++|+.||.|++||+.+++....+.. |...|.+++|++ ++..+++ ++.|+.|++||++...
T Consensus 163 ~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~~l~s-~s~d~~i~vwd~~~~~ 238 (464)
T 3v7d_B 163 GGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEG--HNSTVRCLDIVEYKNIKYIVT-GSRDNTLHVWKLPKES 238 (464)
T ss_dssp SCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEEEESSSCEEEEE-EETTSCEEEEECCCCC
T ss_pred cCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECC--CCCccEEEEEecCCCCCEEEE-EcCCCcEEEeeCCCCc
Confidence 579999999988 899999999999999998876666554 578899999985 5555554 6799999999998654
Q ss_pred Cc-------------------------cccc---------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEE
Q psy8758 80 SP-------------------------LNVH---------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVD 125 (198)
Q Consensus 80 ~~-------------------------~~~~---------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~ 125 (198)
.. +..| .+..+++++.|+.|++||+++ .+++..+.+|...+.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~ 317 (464)
T 3v7d_B 239 SVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTI 317 (464)
T ss_dssp CC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEE
T ss_pred ccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCC-CcEEEEecCCCCCEEEEE
Confidence 21 1122 234689999999999999998 788888999999999999
Q ss_pred EccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 126 YSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 126 ~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
|+|+++++++++.|+.|++||+++++.+..+ .+|...|.+++|+ +++|++++.||.|++||+++++.
T Consensus 318 ~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 318 YDHERKRCISASMDTTIRIWDLENGELMYTL-QGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp EETTTTEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE
T ss_pred EcCCCCEEEEEeCCCcEEEEECCCCcEEEEE-eCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCce
Confidence 9999999999999999999999999988877 6888999999997 57999999999999999998764
No 71
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.6e-32 Score=196.68 Aligned_cols=186 Identities=15% Similarity=0.189 Sum_probs=142.0
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCc-eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE-KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN- 79 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~- 79 (198)
+.|.+++|+|++++|++++.|+.|++||+.+++ .........|...|.+++|+|+++.++++ +.|+.|++||++...
T Consensus 56 ~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 56 KIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVG-SGARVISVCYFEQEND 134 (377)
T ss_dssp SCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEE-ESSSCEEECCC-----
T ss_pred ceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEE-ecCCeEEEEEECCccc
Confidence 579999999999999999999999999998776 11222222367889999999999988764 689999999998653
Q ss_pred ----Ccccc-cc-----------CceEEEecCCCcEEEEEccCC-----------------CcceeeecCCCcceEEEEE
Q psy8758 80 ----SPLNV-HK-----------DMTSAAANEDFNLYSYDIRQL-----------------NSPLNVHKDMTSAVTSVDY 126 (198)
Q Consensus 80 ----~~~~~-~~-----------~~~~~~~~~~~~i~~~d~~~~-----------------~~~~~~~~~~~~~i~~~~~ 126 (198)
..+.. |. +..+++++.|+.|++||++.. ++++..+ .|...|.+++|
T Consensus 135 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 213 (377)
T 3dwl_C 135 WWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGF 213 (377)
T ss_dssp CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEE
T ss_pred ceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEE
Confidence 22222 32 346899999999999998521 2344555 88999999999
Q ss_pred ccCCCEEEEeecCCcEEEEEcCCCce----eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758 127 SPTGREFVAGGYDKSLRLYLAHQGHS----RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 127 sp~~~~l~~~~~d~~v~v~d~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
+|++++|++++.|+.|++||+.+++. +..+ .+|...|.+++|+|++++|++++.++.+ +|+..
T Consensus 214 sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 214 SPSGNALAYAGHDSSVTIAYPSAPEQPPRALITV-KLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp CTTSSCEEEEETTTEEC-CEECSTTSCEEECCCE-ECSSSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCCCcceeeEee-cCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 99999999999999999999999887 4444 6788899999999999999998876666 66654
No 72
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.2e-30 Score=193.16 Aligned_cols=190 Identities=18% Similarity=0.357 Sum_probs=154.3
Q ss_pred cceeEEEECCCCc-eEEEeeCCCeEEEEEccCCcee----eeeeee-eecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758 2 QHVTHTVWSLDNK-FVISASDEMNLRVWKAHASEKL----GPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI 75 (198)
Q Consensus 2 ~~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~----~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~ 75 (198)
+.|.+++|+|+++ +|++++.||.|++|++..+... ...... .|...|.+++|+|++..++++++.|+.|++||+
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~ 261 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDT 261 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred CCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEEC
Confidence 4689999999998 9999999999999999874321 111222 367789999999966666666789999999999
Q ss_pred cCCC---C--ccccc------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC-EEEEee
Q psy8758 76 RQLN---S--PLNVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR-EFVAGG 137 (198)
Q Consensus 76 ~~~~---~--~~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~-~l~~~~ 137 (198)
+... . .+..| ...++++++.|+.|++||+++...++..+..|...|.+++|+|+++ +|++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~ 341 (430)
T 2xyi_A 262 RNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG 341 (430)
T ss_dssp TCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEE
T ss_pred CCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEe
Confidence 8652 1 12222 2236899999999999999986678888999999999999999986 689999
Q ss_pred cCCcEEEEEcCCC--------------ceeeEEeccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecCC
Q psy8758 138 YDKSLRLYLAHQG--------------HSRDIYHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHA 192 (198)
Q Consensus 138 ~d~~v~v~d~~~~--------------~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~ 192 (198)
.|+.|++||+... +.+. ...+|...|.+++|+|+++ +|++++.||.|++|++.+
T Consensus 342 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 342 TDRRLHVWDLSKIGEEQSTEDAEDGPPELLF-IHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp TTSCCEEEEGGGTTCCCCHHHHHHCCTTEEE-ECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCCcEEEEeCCCCccccCccccccCCcceEE-EcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 9999999999872 3333 3467888999999999999 899999999999999865
No 73
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-30 Score=190.48 Aligned_cols=192 Identities=17% Similarity=0.231 Sum_probs=150.0
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeee--------------------------------------e-e
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIR--------------------------------------K-V 42 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~--------------------------------------~-~ 42 (198)
+.|.+++|+|++++|++++.||.|++||+.+++....+. . .
T Consensus 135 ~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 214 (401)
T 4aez_A 135 TYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQ 214 (401)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred CCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEc
Confidence 468899999999999999999999999987665433221 1 1
Q ss_pred eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--cccc------------cCceEEEec--CCCcEEEEEccC
Q psy8758 43 VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LNVH------------KDMTSAAAN--EDFNLYSYDIRQ 106 (198)
Q Consensus 43 ~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~~~------------~~~~~~~~~--~~~~i~~~d~~~ 106 (198)
.|...|.+++|+|+++.+++ ++.|+.|++||+++.... +..| ...++++++ .|+.|++||+++
T Consensus 215 ~~~~~v~~~~~~~~~~~l~s-~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~ 293 (401)
T 4aez_A 215 GHSSEVCGLAWRSDGLQLAS-GGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT 293 (401)
T ss_dssp CCSSCEEEEEECTTSSEEEE-EETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT
T ss_pred CCCCCeeEEEEcCCCCEEEE-EeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC
Confidence 25667889999998888876 468999999998764422 1112 234566655 799999999998
Q ss_pred CCcceeeecCCCcceEEEEEccCCCEEEE--eecCCcEEEEEcCCCceeeEE-eccCcccEEEEEEcCCCCEEEEecCCC
Q psy8758 107 LNSPLNVHKDMTSAVTSVDYSPTGREFVA--GGYDKSLRLYLAHQGHSRDIY-HTKRMQHVTHTVWSLDNKFVISASDEM 183 (198)
Q Consensus 107 ~~~~~~~~~~~~~~i~~~~~sp~~~~l~~--~~~d~~v~v~d~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg 183 (198)
++++..+. +...+.+++|+|+++++++ |+.|+.|++||+.+++..... ..+|...|.+++|+|++++|++++.||
T Consensus 294 -~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg 371 (401)
T 4aez_A 294 -GARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDE 371 (401)
T ss_dssp -CCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTS
T ss_pred -CCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 66776665 5678999999999999998 448999999999997665543 357889999999999999999999999
Q ss_pred eEEEEecCCCccc
Q psy8758 184 NLRVWKAHASEKL 196 (198)
Q Consensus 184 ~v~~w~~~~~~~~ 196 (198)
.|++|++.+++.+
T Consensus 372 ~i~iw~~~~~~~~ 384 (401)
T 4aez_A 372 NLKFWRVYDGDHV 384 (401)
T ss_dssp EEEEEECCC----
T ss_pred cEEEEECCCCccc
Confidence 9999999998865
No 74
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-30 Score=190.72 Aligned_cols=188 Identities=15% Similarity=0.126 Sum_probs=157.8
Q ss_pred ceeEEEECCCCceE-EEeeCCCeEEEEEcc--CCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758 3 HVTHTVWSLDNKFV-ISASDEMNLRVWKAH--ASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 3 ~v~~~~~s~~~~~l-~~~~~d~~i~i~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
.|.+++|+|++++| ++++.||.|++||+. +++....+..+.+...+.+++|+|+++.++++ +.++.+++|++....
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIA-DKFGDVYSIDINSIP 182 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTSCC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEE-eCCCcEEEEecCCcc
Confidence 59999999999996 889999999999998 77777777665677889999999999998875 689999999986543
Q ss_pred C------ccccc-----------c---CceEEEecCCCcEEEEEccCCCcceee-ecCCCcceEEEEEccCCCEEEEeec
Q psy8758 80 S------PLNVH-----------K---DMTSAAANEDFNLYSYDIRQLNSPLNV-HKDMTSAVTSVDYSPTGREFVAGGY 138 (198)
Q Consensus 80 ~------~~~~~-----------~---~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~sp~~~~l~~~~~ 138 (198)
. .+..| . +..+++++.|+.|++||+++ +..+.. +.+|...|.+++|+ ++++|++++.
T Consensus 183 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~ 260 (450)
T 2vdu_B 183 EEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ-CFIVDKWLFGHKHFVSSICCG-KDYLLLSAGG 260 (450)
T ss_dssp CSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC-TTCEEEECCCCSSCEEEEEEC-STTEEEEEES
T ss_pred cccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC-CceeeeeecCCCCceEEEEEC-CCCEEEEEeC
Confidence 2 22222 2 45899999999999999998 566665 56899999999999 9999999999
Q ss_pred CCcEEEEEcCCCceeeEEec------------------------cCcccEEEEEEcCCCCEEEEec-CCCeEEEEec--C
Q psy8758 139 DKSLRLYLAHQGHSRDIYHT------------------------KRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKA--H 191 (198)
Q Consensus 139 d~~v~v~d~~~~~~~~~~~~------------------------~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~--~ 191 (198)
|+.|++||+.+++.+..+.. .....|.+++|+|++++|++++ .|+.|++|++ .
T Consensus 261 d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~ 340 (450)
T 2vdu_B 261 DDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEK 340 (450)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSS
T ss_pred CCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccC
Confidence 99999999999988776632 2235689999999999999888 8999999999 5
Q ss_pred CC
Q psy8758 192 AS 193 (198)
Q Consensus 192 ~~ 193 (198)
++
T Consensus 341 ~~ 342 (450)
T 2vdu_B 341 QK 342 (450)
T ss_dssp ST
T ss_pred CC
Confidence 54
No 75
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-31 Score=211.73 Aligned_cols=188 Identities=11% Similarity=0.154 Sum_probs=152.1
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
+.|++++|+|++++||+|+.||.|++|+....+... .+.+...|.+++|+| ++++++ ++.|+.|++||+++....
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~---~~~~~~~V~~l~fsp-g~~L~S-~s~D~~v~lWd~~~~~~~ 92 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVI---KLEDRSAIKEMRFVK-GIYLVV-INAKDTVYVLSLYSQKVL 92 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEE---ECSSCCCEEEEEEET-TTEEEE-EETTCEEEEEETTTCSEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEE---EcCCCCCEEEEEEcC-CCEEEE-EECcCeEEEEECCCCcEE
Confidence 579999999999999999999999999987655322 233567899999999 776665 579999999999865421
Q ss_pred --ccc----------ccCceEEEecCCCcEEEEEccCCCcce-----------eeecCCCcceEEEEEccC-CCEEEEee
Q psy8758 82 --LNV----------HKDMTSAAANEDFNLYSYDIRQLNSPL-----------NVHKDMTSAVTSVDYSPT-GREFVAGG 137 (198)
Q Consensus 82 --~~~----------~~~~~~~~~~~~~~i~~~d~~~~~~~~-----------~~~~~~~~~i~~~~~sp~-~~~l~~~~ 137 (198)
+.. .....+++++.||.|++||++. .... ....+|..+|.+++|+|+ +..+++++
T Consensus 93 ~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~-~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~ 171 (902)
T 2oaj_A 93 TTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDR-DQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY 171 (902)
T ss_dssp EEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTT-TEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC
T ss_pred EEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCC-CccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEe
Confidence 111 1235789999999999999987 3322 233568899999999996 57899999
Q ss_pred cCCcEEEEEcCCCceeeEEec-----------------cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 138 YDKSLRLYLAHQGHSRDIYHT-----------------KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 138 ~d~~v~v~d~~~~~~~~~~~~-----------------~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
.|+.| +||+++++....+.. .|...|.+++|+|+|++|++++.||.|++||+++++++
T Consensus 172 ~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 172 EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred CCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 99999 999999988776621 13467999999999999999999999999999988764
No 76
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=6.1e-30 Score=187.22 Aligned_cols=190 Identities=18% Similarity=0.289 Sum_probs=150.8
Q ss_pred cceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCC---eEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEA---FVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~~~~~~d~~i~~~d~~~ 77 (198)
+.|.+++|+| +++++++++.||.|++||+.+++....+. +...+.++.|+|.+. .+++ ++.++.|++||+++
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~d~~~ 175 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN---FEETVYSHHMSPVSTKHCLVAV-GTRGPKVQLCDLKS 175 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE---CSSCEEEEEECSSCSSCCEEEE-EESSSSEEEEESSS
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc---CCCceeeeEeecCCCCCcEEEE-EcCCCeEEEEeCCC
Confidence 4699999999 77899999999999999998877554443 467789999998654 5554 67999999999986
Q ss_pred CCCc--ccccc------------CceEEEecCCCcEEEEEccCCCcceeee---------------cCCCcceEEEEEcc
Q psy8758 78 LNSP--LNVHK------------DMTSAAANEDFNLYSYDIRQLNSPLNVH---------------KDMTSAVTSVDYSP 128 (198)
Q Consensus 78 ~~~~--~~~~~------------~~~~~~~~~~~~i~~~d~~~~~~~~~~~---------------~~~~~~i~~~~~sp 128 (198)
.... +..|. ..++++++.|+.|++||++....++..+ ..|...|.+++|+|
T Consensus 176 ~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 255 (408)
T 4a11_B 176 GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS 255 (408)
T ss_dssp SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT
T ss_pred cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC
Confidence 5422 22221 2268899999999999998744444444 56888999999999
Q ss_pred CCCEEEEeecCCcEEEEEcCCCcee-----------------------------------------------eEEeccCc
Q psy8758 129 TGREFVAGGYDKSLRLYLAHQGHSR-----------------------------------------------DIYHTKRM 161 (198)
Q Consensus 129 ~~~~l~~~~~d~~v~v~d~~~~~~~-----------------------------------------------~~~~~~~~ 161 (198)
++++|++++.|+.|++||+.+++.. ..+ .+|.
T Consensus 256 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~-~~~~ 334 (408)
T 4a11_B 256 DGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML-KGHY 334 (408)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE-CCCS
T ss_pred CCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee-ccCC
Confidence 9999999999999999999865422 222 4688
Q ss_pred ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 162 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 162 ~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
..|.+++|+|++++|++++.||.|++||+++++.+
T Consensus 335 ~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 335 KTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEECC----
T ss_pred CeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCcc
Confidence 89999999999999999999999999999998765
No 77
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.2e-31 Score=189.96 Aligned_cols=184 Identities=17% Similarity=0.166 Sum_probs=150.5
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEe--CCCCCeEEEEecCCccEEEEeccCCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSW--NPMEAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
++|.+++|+|++++|++++.||.|++||+.+++... ...|...|.+++| +|++..+++ ++.|+.|++||+++..
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~---~~~~~~~v~~~~~~~~~~~~~l~~-~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ---IAQHDAPVKTIHWIKAPNYSCVMT-GSWDKTLKFWDTRSSN 162 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE---EEECSSCEEEEEEEECSSCEEEEE-EETTSEEEEECSSCSS
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee---eccccCceEEEEEEeCCCCCEEEE-ccCCCcEEEEECCCCc
Confidence 579999999999999999999999999998876443 3346888999999 888887776 5689999999997654
Q ss_pred Ccc--ccc--------------------------------------------------------cCceEEEecCCCcEEE
Q psy8758 80 SPL--NVH--------------------------------------------------------KDMTSAAANEDFNLYS 101 (198)
Q Consensus 80 ~~~--~~~--------------------------------------------------------~~~~~~~~~~~~~i~~ 101 (198)
... ..+ ....+++++.|+.+++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i 242 (368)
T 3mmy_A 163 PMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAI 242 (368)
T ss_dssp CSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEE
T ss_pred EEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEE
Confidence 211 100 0012889999999999
Q ss_pred EEccCCC--cceeeecCCCc------------ceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEE
Q psy8758 102 YDIRQLN--SPLNVHKDMTS------------AVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHT 167 (198)
Q Consensus 102 ~d~~~~~--~~~~~~~~~~~------------~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~ 167 (198)
||++... .....+..|.. .+.+++|+|++++|++++.||.|++||+++++.+..+ ..|...|.++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~ 321 (368)
T 3mmy_A 243 HYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS-EQLDQPISAC 321 (368)
T ss_dssp EESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC-CCCSSCEEEE
T ss_pred EecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe-cCCCCCceEE
Confidence 9998732 45666677765 7999999999999999999999999999999888776 6788999999
Q ss_pred EEcCCCCEEEEecCCCeEEEEec
Q psy8758 168 VWSLDNKFVISASDEMNLRVWKA 190 (198)
Q Consensus 168 ~~s~~~~~l~~~~~dg~v~~w~~ 190 (198)
+|+|++++|++++.|+..+.|++
T Consensus 322 ~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 322 CFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp EECTTSSCEEEEECCCSTTCGGG
T ss_pred EECCCCCeEEEEecccccccccc
Confidence 99999999999998875555544
No 78
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-31 Score=201.73 Aligned_cols=192 Identities=12% Similarity=0.108 Sum_probs=144.8
Q ss_pred cceeEEEECCCC---------ceEEE-------------------eeCCCeEEEEEccCCceeee-eeee-eecCceeeE
Q psy8758 2 QHVTHTVWSLDN---------KFVIS-------------------ASDEMNLRVWKAHASEKLGP-IRKV-VMSLRSNMV 51 (198)
Q Consensus 2 ~~v~~~~~s~~~---------~~l~~-------------------~~~d~~i~i~~~~~~~~~~~-~~~~-~~~~~v~~~ 51 (198)
++|.+++|+|++ ++||+ ++.|++|+||++.+++.... .... .+...|.++
T Consensus 134 ~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v 213 (524)
T 2j04_B 134 GLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDL 213 (524)
T ss_dssp C--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEE
T ss_pred CceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEE
Confidence 467777887765 55555 55788999999987764221 1112 246789999
Q ss_pred EeCCC------CCeEEEEecCCccEEEEeccCCCC-------------cccc----------ccCceEEEecCCCcEEEE
Q psy8758 52 SWNPM------EAFVFTAANEDFNLYSYDIRQLNS-------------PLNV----------HKDMTSAAANEDFNLYSY 102 (198)
Q Consensus 52 ~~~~~------~~~~~~~~~~d~~i~~~d~~~~~~-------------~~~~----------~~~~~~~~~~~~~~i~~~ 102 (198)
+|+|+ +..| ++++.|++|++||+..... .+.. +.+..+++|+.||+|++|
T Consensus 214 ~wsp~~~~~~~~~~L-As~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lW 292 (524)
T 2j04_B 214 KWHEGCHAPHLVGCL-SFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEF 292 (524)
T ss_dssp EECSSCCCSSSSCEE-EEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEE
T ss_pred EECCCCCCCCCCceE-EEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEE
Confidence 99997 3455 4567999999999975421 1122 233579999999999999
Q ss_pred EccCCCcceeeecCCCcceEEE--EEccCC-CEEEEeecCCcEEEEEcCCCceeeEEeccCc--ccEEEEEEcCCCCEEE
Q psy8758 103 DIRQLNSPLNVHKDMTSAVTSV--DYSPTG-REFVAGGYDKSLRLYLAHQGHSRDIYHTKRM--QHVTHTVWSLDNKFVI 177 (198)
Q Consensus 103 d~~~~~~~~~~~~~~~~~i~~~--~~sp~~-~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~ 177 (198)
|+++...+...+..|...|.++ +|+|++ ++|++++.|++|++||+++++....+ .+|. ..|.+++|+|+++.++
T Consensus 293 D~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~-~~~~~~~~v~~v~fsp~~~~l~ 371 (524)
T 2j04_B 293 DLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTT-VSRFRGSNLVPVVYCPQIYSYI 371 (524)
T ss_dssp ETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEE-EEECSCCSCCCEEEETTTTEEE
T ss_pred ECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccc-ccccccCcccceEeCCCcCeEE
Confidence 9997445666788999999999 578888 89999999999999999998776655 3443 2578999999999999
Q ss_pred EecCCCeEEEEecCCCcc
Q psy8758 178 SASDEMNLRVWKAHASEK 195 (198)
Q Consensus 178 ~~~~dg~v~~w~~~~~~~ 195 (198)
+++.|++|++||++++.+
T Consensus 372 s~~~d~tv~lwd~~~~~~ 389 (524)
T 2j04_B 372 YSDGASSLRAVPSRAAFA 389 (524)
T ss_dssp EECSSSEEEEEETTCTTC
T ss_pred EeCCCCcEEEEECccccc
Confidence 999999999999998775
No 79
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9.7e-31 Score=206.59 Aligned_cols=192 Identities=12% Similarity=0.264 Sum_probs=166.0
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
+.|.+++|+|++++|++++.||.|++||+.+++....+.. |...|.+++|+|+++.++++ +.|+.|++||+.+....
T Consensus 14 ~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~-~~dg~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 14 DRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQV--TETPVRAGKFIARKNWIIVG-SDDFRIRVFNYNTGEKV 90 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC--CSSCEEEEEEEGGGTEEEEE-ETTSEEEEEETTTCCEE
T ss_pred CceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEec--CCCcEEEEEEeCCCCEEEEE-eCCCeEEEEECCCCcEE
Confidence 5799999999999999999999999999998877666654 57889999999999998875 58999999999765432
Q ss_pred --cccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-CCCEEEEeecCCcEEEEEc
Q psy8758 82 --LNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLA 147 (198)
Q Consensus 82 --~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~d~~v~v~d~ 147 (198)
+..| .+..+++++.|+.|++||+.+.......+..|...+.+++|+| +++.+++++.|+.|++||+
T Consensus 91 ~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~ 170 (814)
T 3mkq_A 91 VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSL 170 (814)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEET
T ss_pred EEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 2223 2346899999999999999984467778888999999999999 8899999999999999999
Q ss_pred CCCceeeEEeccCcccEEEEEEcC--CCCEEEEecCCCeEEEEecCCCccc
Q psy8758 148 HQGHSRDIYHTKRMQHVTHTVWSL--DNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
.++.....+...+...+..++|+| ++.+|++++.||.|++||+.+++.+
T Consensus 171 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~ 221 (814)
T 3mkq_A 171 GQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV 221 (814)
T ss_dssp TCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEE
T ss_pred CCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEE
Confidence 998887777666668999999999 9999999999999999999987754
No 80
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.1e-30 Score=191.83 Aligned_cols=188 Identities=17% Similarity=0.276 Sum_probs=153.3
Q ss_pred cceeEEEECCC-CceEEEeeCCCeEEEEEccC----------CceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccE
Q psy8758 2 QHVTHTVWSLD-NKFVISASDEMNLRVWKAHA----------SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNL 70 (198)
Q Consensus 2 ~~v~~~~~s~~-~~~l~~~~~d~~i~i~~~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i 70 (198)
+.|++++|+|+ ++++++++.||.|++|++.. .+....+. .|...+.+++|+|++..++++|+.||.|
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i 206 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLR--GHQKEGYGLSWNPNLNGYLLSASDDHTI 206 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEE--CCSSCCCCEEECTTSTTEEEEECTTSCE
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEec--CCCCCeEEEEeCCCCCCeEEEEeCCCeE
Confidence 57999999997 68999999999999999976 23333333 3677899999999998444557899999
Q ss_pred EEEeccCCC---------Cccccc------------cCceEEEecCCCcEEEEEccCCC--cceeeecCCCcceEEEEEc
Q psy8758 71 YSYDIRQLN---------SPLNVH------------KDMTSAAANEDFNLYSYDIRQLN--SPLNVHKDMTSAVTSVDYS 127 (198)
Q Consensus 71 ~~~d~~~~~---------~~~~~~------------~~~~~~~~~~~~~i~~~d~~~~~--~~~~~~~~~~~~i~~~~~s 127 (198)
++||+.... ..+..| ...++++++.|+.|++||++... .++..+..|...+++++|+
T Consensus 207 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~ 286 (430)
T 2xyi_A 207 CLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFN 286 (430)
T ss_dssp EEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEEC
T ss_pred EEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeC
Confidence 999998622 112222 34578999999999999999742 5677778899999999999
Q ss_pred cCCC-EEEEeecCCcEEEEEcCCC-ceeeEEeccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecCC
Q psy8758 128 PTGR-EFVAGGYDKSLRLYLAHQG-HSRDIYHTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHA 192 (198)
Q Consensus 128 p~~~-~l~~~~~d~~v~v~d~~~~-~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~ 192 (198)
|+++ ++++++.|+.|++||++.. ..+..+ ..|...|.+++|+|+++ +|++++.||.|++||+..
T Consensus 287 p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~-~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 287 PYSEFILATGSADKTVALWDLRNLKLKLHSF-ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp SSCTTEEEEEETTSEEEEEETTCTTSCSEEE-ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCCCCEEEEEeCCCeEEEEeCCCCCCCeEEe-ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 9987 6889999999999999984 445554 57889999999999985 688999999999999987
No 81
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.8e-30 Score=199.09 Aligned_cols=188 Identities=16% Similarity=0.237 Sum_probs=159.4
Q ss_pred eeEEEECC--CCceEEEeeCCCeEEEEEccCC--------ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC----cc
Q psy8758 4 VTHTVWSL--DNKFVISASDEMNLRVWKAHAS--------EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED----FN 69 (198)
Q Consensus 4 v~~~~~s~--~~~~l~~~~~d~~i~i~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d----~~ 69 (198)
|++++|+| ++++|++++.||.|++||+.++ +....+. .+...|.+++|+|+++.+++++ .+ +.
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~-~~~~~~~~ 143 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQ--VLAGPISDISWDFEGRRLCVVG-EGRDNFGV 143 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEE--CCSSCEEEEEECTTSSEEEEEE-CCSSCSEE
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhh--cccccEEEEEEeCCCCEEEEec-cCCCCccE
Confidence 99999999 9999999999999999999754 2222222 2678899999999999998865 44 78
Q ss_pred EEEEeccCCCCccccccC------------ceEEEecCCCcEEEEEccCCCcceeeecCCCc---ceEEEEEccC-CCEE
Q psy8758 70 LYSYDIRQLNSPLNVHKD------------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS---AVTSVDYSPT-GREF 133 (198)
Q Consensus 70 i~~~d~~~~~~~~~~~~~------------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---~i~~~~~sp~-~~~l 133 (198)
|++||.......+..|.. ..+++++.|+.|++||+++ .+.+..+..|.. .+.+++|+|+ +++|
T Consensus 144 v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 222 (615)
T 1pgu_A 144 FISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP-FKFSASDRTHHKQGSFVRDVEFSPDSGEFV 222 (615)
T ss_dssp EEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT-BEEEEEECSSSCTTCCEEEEEECSTTCCEE
T ss_pred EEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC-cceeeeecccCCCCceEEEEEECCCCCCEE
Confidence 999996543333333322 2799999999999999988 678888888988 9999999999 9999
Q ss_pred EEeecCCcEEEEEcCCCceeeEEec---cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 134 VAGGYDKSLRLYLAHQGHSRDIYHT---KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 134 ~~~~~d~~v~v~d~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
++++.|+.|++||+++++.+..+.. .|...|.+++|+ ++++|++++.|+.|++||+++++.+
T Consensus 223 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 223 ITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCV 287 (615)
T ss_dssp EEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEE
T ss_pred EEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEE
Confidence 9999999999999999988877644 788999999999 9999999999999999999988754
No 82
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=6.9e-31 Score=194.70 Aligned_cols=190 Identities=13% Similarity=0.255 Sum_probs=149.7
Q ss_pred cceeEEEECCCC--ceEEEeeCCCeEEEEEccCCceeee--------------------------------------eee
Q psy8758 2 QHVTHTVWSLDN--KFVISASDEMNLRVWKAHASEKLGP--------------------------------------IRK 41 (198)
Q Consensus 2 ~~v~~~~~s~~~--~~l~~~~~d~~i~i~~~~~~~~~~~--------------------------------------~~~ 41 (198)
++|++++|+|++ .++++++.|+.|++||+.+++.... ...
T Consensus 94 ~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (447)
T 3dw8_B 94 EKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFA 173 (447)
T ss_dssp CCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEEC
T ss_pred CceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEec
Confidence 569999999998 7999999999999999976432100 111
Q ss_pred eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC----------ccccc----------c-C-ceEEEecCCCcE
Q psy8758 42 VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS----------PLNVH----------K-D-MTSAAANEDFNL 99 (198)
Q Consensus 42 ~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~----------~~~~~----------~-~-~~~~~~~~~~~i 99 (198)
..|...|.+++|+|+++.+++ | .|+.|++||++.... .+..| + + ..+++++.|+.|
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s-~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLS-A-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEE-E-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred cCCCcceEEEEEcCCCCEEEE-e-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 236788999999999998876 5 699999999983221 11222 2 2 579999999999
Q ss_pred EEEEccCCCcc----eeeecCCCc------------ceEEEEEccCCCEEEEeecCCcEEEEEcCC-CceeeEEeccCcc
Q psy8758 100 YSYDIRQLNSP----LNVHKDMTS------------AVTSVDYSPTGREFVAGGYDKSLRLYLAHQ-GHSRDIYHTKRMQ 162 (198)
Q Consensus 100 ~~~d~~~~~~~----~~~~~~~~~------------~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~-~~~~~~~~~~~~~ 162 (198)
++||+++ ... ...+..|.. .|.+++|+|++++|++++. +.|++||++. ++++..+ ..|..
T Consensus 252 ~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~-~~~~~ 328 (447)
T 3dw8_B 252 RLCDMRA-SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETY-QVHEY 328 (447)
T ss_dssp EEEETTT-CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCE-ESCGG
T ss_pred EEEECcC-CccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccccee-ecccc
Confidence 9999998 444 677777775 8999999999999999998 9999999997 7776666 45532
Q ss_pred c---------------EEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 163 H---------------VTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 163 ~---------------v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
. +..++|+|++++|++++.||.|++||+.+++.+
T Consensus 329 ~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 329 LRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp GTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE
T ss_pred ccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce
Confidence 1 334899999999999999999999999988753
No 83
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.4e-29 Score=182.95 Aligned_cols=189 Identities=12% Similarity=0.202 Sum_probs=162.3
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC-----ccEEEEecc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED-----FNLYSYDIR 76 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~ 76 (198)
+.|.+++|+|++++|++++.||.|++||+.+++....+. +...+.+++|+|+++.++++ +.+ +.|.+||+.
T Consensus 75 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~-~~~~~~~~g~i~~~d~~ 150 (369)
T 3zwl_B 75 GTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK---SPVPVKRVEFSPCGNYFLAI-LDNVMKNPGSINIYEIE 150 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE---CSSCEEEEEECTTSSEEEEE-ECCBTTBCCEEEEEEEE
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee---cCCCeEEEEEccCCCEEEEe-cCCccCCCCEEEEEEec
Confidence 578999999999999999999999999999887655554 57789999999999998875 466 999999987
Q ss_pred CCCCc-------------ccc-------------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC
Q psy8758 77 QLNSP-------------LNV-------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG 130 (198)
Q Consensus 77 ~~~~~-------------~~~-------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~ 130 (198)
..... +.. ..+..+++++.|+.|++||+++....+..+..|...+.+++|+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 230 (369)
T 3zwl_B 151 RDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDL 230 (369)
T ss_dssp ECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred CCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCC
Confidence 54321 111 1234789999999999999997567788888899999999999999
Q ss_pred CEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC--------------eEEEEecCCCccc
Q psy8758 131 REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM--------------NLRVWKAHASEKL 196 (198)
Q Consensus 131 ~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--------------~v~~w~~~~~~~~ 196 (198)
++|++++.|+.|++||+++++....+. +...+..++|+|+++++++++.++ .+++||+.+++.+
T Consensus 231 ~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 308 (369)
T 3zwl_B 231 TYFITSSRDTNSFLVDVSTLQVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI 308 (369)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEE
T ss_pred CEEEEecCCceEEEEECCCCceeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch
Confidence 999999999999999999998888774 568899999999999999998888 8999999888764
No 84
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.98 E-value=3.8e-31 Score=193.71 Aligned_cols=186 Identities=13% Similarity=0.074 Sum_probs=132.4
Q ss_pred cceeEEEECC--------CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEE
Q psy8758 2 QHVTHTVWSL--------DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSY 73 (198)
Q Consensus 2 ~~v~~~~~s~--------~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~ 73 (198)
+.|++++|+| ++++||+++.|++|+|||+.++.....+. .+...+.+++|+|++..++++++.|+.|++|
T Consensus 137 ~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~--~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~w 214 (393)
T 4gq1_A 137 NFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGY--PLSSPGISVQFRPSNPNQLIVGERNGNIRIF 214 (393)
T ss_dssp SCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEE--ECSSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred CceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeec--CCCCCcEEEEECCCCCceEEecCCCCEEEEE
Confidence 5699999998 88999999999999999998776544443 3577899999999988766778899999999
Q ss_pred eccCCCCcc---------------------------------------ccccCceEEEecCCCcEEEEEccCCCcceeee
Q psy8758 74 DIRQLNSPL---------------------------------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH 114 (198)
Q Consensus 74 d~~~~~~~~---------------------------------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~ 114 (198)
|+++..... ....+..+++++.|+++++||+.. .+....+
T Consensus 215 d~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~-~~~~~~l 293 (393)
T 4gq1_A 215 DWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFA-NNDYNEI 293 (393)
T ss_dssp ETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC----------
T ss_pred ECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECcc-CCCCceE
Confidence 997543211 012335689999999999999986 3444444
Q ss_pred cCCCcceEEE------------------EEcc--CCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC
Q psy8758 115 KDMTSAVTSV------------------DYSP--TGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK 174 (198)
Q Consensus 115 ~~~~~~i~~~------------------~~sp--~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 174 (198)
..|...+..+ .++| ++.++++++.|+.|++||+.+++..... .+|..+|.+++|+|||+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~-~~~~~~V~svafspdG~ 372 (393)
T 4gq1_A 294 SDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIP-IQLGMPIVDFCWHQDGS 372 (393)
T ss_dssp ----------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEE-EECSSCEEEEEECTTSS
T ss_pred eeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEe-cCCCCcEEEEEEcCCCC
Confidence 3333333332 3333 2336678889999999999999887766 56778999999999999
Q ss_pred EEEEecCCCeEEEEecCC
Q psy8758 175 FVISASDEMNLRVWKAHA 192 (198)
Q Consensus 175 ~l~~~~~dg~v~~w~~~~ 192 (198)
+||+++.+| +.+|++..
T Consensus 373 ~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 373 HLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp EEEEEESSE-EEEEEEGG
T ss_pred EEEEEeCCC-eEEEEEeC
Confidence 999998665 66666543
No 85
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.98 E-value=1.7e-30 Score=187.13 Aligned_cols=188 Identities=14% Similarity=0.256 Sum_probs=153.2
Q ss_pred cceeEEEECCC---CceEEEeeCCCeEEEEEccCCc-eeeeeeeeeecCceeeE------EeCCCCCeEEEEecCCccEE
Q psy8758 2 QHVTHTVWSLD---NKFVISASDEMNLRVWKAHASE-KLGPIRKVVMSLRSNMV------SWNPMEAFVFTAANEDFNLY 71 (198)
Q Consensus 2 ~~v~~~~~s~~---~~~l~~~~~d~~i~i~~~~~~~-~~~~~~~~~~~~~v~~~------~~~~~~~~~~~~~~~d~~i~ 71 (198)
++|.+++|+|+ ++++++++.||.|++||+.+++ ....+.. |...|.++ +|+|+++.+++ ++.|+.|+
T Consensus 66 ~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~s~~~~~l~~-~~~d~~i~ 142 (357)
T 3i2n_A 66 KPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKG--HKEIINAIDGIGGLGIGEGAPEIVT-GSRDGTVK 142 (357)
T ss_dssp SCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECC--CSSCEEEEEEESGGGCC-CCCEEEE-EETTSCEE
T ss_pred CcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEe--cccceEEEeeccccccCCCccEEEE-EeCCCeEE
Confidence 57999999998 6999999999999999998876 4445443 57788888 45788888876 56899999
Q ss_pred EEeccCCCCc---ccc-------------------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-
Q psy8758 72 SYDIRQLNSP---LNV-------------------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP- 128 (198)
Q Consensus 72 ~~d~~~~~~~---~~~-------------------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp- 128 (198)
+||++..... +.. ..+..+++++.|+.|++||+++ .+. .....|...+.+++|+|
T Consensus 143 vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~-~~~~~~~~~v~~~~~~~~ 220 (357)
T 3i2n_A 143 VWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRN-MAL-RWETNIKNGVCSLEFDRK 220 (357)
T ss_dssp EECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTT-TEE-EEEEECSSCEEEEEESCS
T ss_pred EEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECcc-Cce-eeecCCCCceEEEEcCCC
Confidence 9999865421 111 2345789999999999999997 444 34456888999999999
Q ss_pred --CCCEEEEeecCCcEEEEEcCCCceeeEE----eccCcccEEEEEEcCCCC-EEEEecCCCeEEEEecCCCc
Q psy8758 129 --TGREFVAGGYDKSLRLYLAHQGHSRDIY----HTKRMQHVTHTVWSLDNK-FVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 129 --~~~~l~~~~~d~~v~v~d~~~~~~~~~~----~~~~~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~~~ 194 (198)
+++++++++.|+.|++||+++++....+ ..+|...|.+++|+|+++ +|++++.||.|++||+++++
T Consensus 221 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 221 DISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp SSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred CCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 9999999999999999999987665444 237889999999999998 89999999999999998654
No 86
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.98 E-value=4.2e-30 Score=210.81 Aligned_cols=191 Identities=20% Similarity=0.291 Sum_probs=162.6
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
+.|++++|+|+|+++++|+.||.|++||+.+++....+.. |...|.+++|+|++++++++ +.|+.|++||+.+....
T Consensus 616 ~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~-~~d~~v~vwd~~~~~~~ 692 (1249)
T 3sfz_A 616 DAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKA--HEDEVLCCAFSSDDSYIATC-SADKKVKIWDSATGKLV 692 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC--CSSCEEEEEECTTSSEEEEE-ETTSEEEEEETTTCCEE
T ss_pred ccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEecc--CCCCEEEEEEecCCCEEEEE-eCCCeEEEEECCCCceE
Confidence 5799999999999999999999999999999887666654 57889999999999988775 68999999999865422
Q ss_pred --cccc-------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE
Q psy8758 82 --LNVH-------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL 146 (198)
Q Consensus 82 --~~~~-------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d 146 (198)
+..| ...++++++.|+.|++||+++ +.....+.+|...|.+++|+|+++++++++.|+.|++||
T Consensus 693 ~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~-~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd 771 (1249)
T 3sfz_A 693 HTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ-KECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWD 771 (1249)
T ss_dssp EEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS-SSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEE
T ss_pred EEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC-cchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEe
Confidence 2222 234688999999999999998 678888899999999999999999999999999999999
Q ss_pred cCCCceeeEE------------------------------------------------------eccCcccEEEEEEcCC
Q psy8758 147 AHQGHSRDIY------------------------------------------------------HTKRMQHVTHTVWSLD 172 (198)
Q Consensus 147 ~~~~~~~~~~------------------------------------------------------~~~~~~~v~~~~~s~~ 172 (198)
+.+++....+ ..+|...+.+++|+|+
T Consensus 772 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~ 851 (1249)
T 3sfz_A 772 VRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPY 851 (1249)
T ss_dssp GGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSS
T ss_pred CCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCC
Confidence 9876543222 2256778999999999
Q ss_pred CCEEEEecCCCeEEEEecCCCccc
Q psy8758 173 NKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 173 ~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
++++++++.||.|++||+.+++.+
T Consensus 852 ~~~l~~~~~dg~v~vwd~~~~~~~ 875 (1249)
T 3sfz_A 852 DHLAVIALSQYCVELWNIDSRLKV 875 (1249)
T ss_dssp TTEEEEECSSSCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCeEEEEEcCCCcee
Confidence 999999999999999999887654
No 87
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.98 E-value=5.6e-30 Score=188.20 Aligned_cols=187 Identities=14% Similarity=0.149 Sum_probs=156.0
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeee----------------------------------------
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRK---------------------------------------- 41 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~---------------------------------------- 41 (198)
++|.+++|+|++++|++++.|+.|++||+.+++....+..
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i 229 (425)
T 1r5m_A 150 APIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAI 229 (425)
T ss_dssp SCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCE
T ss_pred ccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeE
Confidence 5789999999999999999999999999987654332211
Q ss_pred -------------e-eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--cccc----------cCceEEEecC
Q psy8758 42 -------------V-VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LNVH----------KDMTSAAANE 95 (198)
Q Consensus 42 -------------~-~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~~~----------~~~~~~~~~~ 95 (198)
. .+...+.+++|+|+++.++++ +.|+.|++||++..... +..| ++..+++++.
T Consensus 230 ~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~ 308 (425)
T 1r5m_A 230 FVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSA-SDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSM 308 (425)
T ss_dssp EEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEE-ETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEET
T ss_pred EEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEE-cCCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeC
Confidence 1 245678999999999988764 68999999998765422 1112 2237899999
Q ss_pred CCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCc--------------------eeeE
Q psy8758 96 DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH--------------------SRDI 155 (198)
Q Consensus 96 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~--------------------~~~~ 155 (198)
|+.|++||+++ .+.+..+..|...+.+++|+|++++|++++.|+.|++||+++++ .+..
T Consensus 309 d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (425)
T 1r5m_A 309 DGSVRLWSLKQ-NTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYAS 387 (425)
T ss_dssp TSEEEEEETTT-TEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEE
T ss_pred CCcEEEEECCC-CcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhh
Confidence 99999999998 67888888899999999999999999999999999999999877 6665
Q ss_pred EeccCcc--cEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758 156 YHTKRMQ--HVTHTVWSLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 156 ~~~~~~~--~v~~~~~s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
+ ..|.. .|.+++|+|++++|++++.||.|++|+++
T Consensus 388 ~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 388 Y-QSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp E-CCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred h-cCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 5 56655 99999999999999999999999999986
No 88
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.98 E-value=8.9e-30 Score=183.44 Aligned_cols=191 Identities=13% Similarity=0.117 Sum_probs=152.9
Q ss_pred cceeEEEECCCCceE-EEeeC---CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC---CCeEEEEecCCccEEEEe
Q psy8758 2 QHVTHTVWSLDNKFV-ISASD---EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM---EAFVFTAANEDFNLYSYD 74 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l-~~~~~---d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~d~~i~~~d 74 (198)
+.|.+++|+|+++.+ ++++. |+.|++||+.+++... .....|...|.+++|+|+ +..+++ ++.|+.|++||
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~-~~~dg~i~iwd 96 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL-LREIEKAKPIKCGTFGATSLQQRYLAT-GDFGGNLHIWN 96 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE-EEEEEESSCEEEEECTTCCTTTCCEEE-EETTSCEEEEC
T ss_pred CceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc-eeeecccCcEEEEEEcCCCCCCceEEE-ecCCCeEEEEe
Confidence 479999999999654 56655 8999999998876433 333357889999999998 577665 57899999999
Q ss_pred ccCCC---Cccccc-----------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCc----ceEEEE----E
Q psy8758 75 IRQLN---SPLNVH-----------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS----AVTSVD----Y 126 (198)
Q Consensus 75 ~~~~~---~~~~~~-----------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~----~i~~~~----~ 126 (198)
+.... ..+..| .+..+++++.|+.|++||+++...++..+..+.. .+.+++ |
T Consensus 97 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 97 LEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAY 176 (357)
T ss_dssp TTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCC
T ss_pred CCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEecc
Confidence 98654 122222 2347899999999999999984446777765544 788888 7
Q ss_pred ccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcC---CCCEEEEecCCCeEEEEecCCCccc
Q psy8758 127 SPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL---DNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 127 sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~---~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+|+++++++++.|+.|++||+++++.... ..|...|.+++|+| ++++|++++.||.|++||+++++.+
T Consensus 177 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 247 (357)
T 3i2n_A 177 NQEERVVCAGYDNGDIKLFDLRNMALRWE--TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPT 247 (357)
T ss_dssp C-CCCEEEEEETTSEEEEEETTTTEEEEE--EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETT
T ss_pred CCCCCEEEEEccCCeEEEEECccCceeee--cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcc
Confidence 89999999999999999999999887554 46778999999999 9999999999999999999887654
No 89
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.98 E-value=1.1e-29 Score=183.51 Aligned_cols=191 Identities=15% Similarity=0.208 Sum_probs=147.2
Q ss_pred cceeEEEECCC---CceEEEeeCCCeEEEEEccC-CceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSLD---NKFVISASDEMNLRVWKAHA-SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~---~~~l~~~~~d~~i~i~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~ 77 (198)
+.|++++|+|+ |++|++++.||.|++||+.+ +... ......|...|.+++|+|+++.+++ ++.|+.|++||+++
T Consensus 40 ~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~h~~~v~~~~~~~~~~~l~s-~~~dg~v~iwd~~~ 117 (368)
T 3mmy_A 40 DSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTI-PKAQQMHTGPVLDVCWSDDGSKVFT-ASCDKTAKMWDLSS 117 (368)
T ss_dssp SCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEE-EEEEEECSSCEEEEEECTTSSEEEE-EETTSEEEEEETTT
T ss_pred CceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCcee-EEEeccccCCEEEEEECcCCCEEEE-EcCCCcEEEEEcCC
Confidence 57999999999 69999999999999999987 4332 1222236888999999999998886 46899999999976
Q ss_pred CCCc-----------cc---cccCceEEEecCCCcEEEEEccCCCcceeeecCCC-------------------------
Q psy8758 78 LNSP-----------LN---VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT------------------------- 118 (198)
Q Consensus 78 ~~~~-----------~~---~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~------------------------- 118 (198)
.... +. ...+..+++++.|+.|++||+++ .+++..+..+.
T Consensus 118 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 196 (368)
T 3mmy_A 118 NQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS-SNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQ 196 (368)
T ss_dssp TEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSC-SSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEE
T ss_pred CCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCC-CcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEE
Confidence 5421 11 12335699999999999999987 45554444322
Q ss_pred ----------------cceEEEEEccCCCE----EEEeecCCcEEEEEcCCC---ceeeEEeccCcc------------c
Q psy8758 119 ----------------SAVTSVDYSPTGRE----FVAGGYDKSLRLYLAHQG---HSRDIYHTKRMQ------------H 163 (198)
Q Consensus 119 ----------------~~i~~~~~sp~~~~----l~~~~~d~~v~v~d~~~~---~~~~~~~~~~~~------------~ 163 (198)
....++++.++... +++++.|+.|++||++.. .....+ ..|.. .
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 275 (368)
T 3mmy_A 197 LENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTF-KCHRSNGTNTSAPQDIYA 275 (368)
T ss_dssp CSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEE-ECSEEC----CCCEEECC
T ss_pred eccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceee-eeeecccccccccccccc
Confidence 33455555555544 999999999999999987 334444 44544 7
Q ss_pred EEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 164 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 164 v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
|.+++|+|++++|++++.||.|++||+++++++
T Consensus 276 v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~ 308 (368)
T 3mmy_A 276 VNGIAFHPVHGTLATVGSDGRFSFWDKDARTKL 308 (368)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred eEEEEEecCCCEEEEEccCCeEEEEECCCCcEE
Confidence 999999999999999999999999999998765
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=9.6e-30 Score=186.66 Aligned_cols=188 Identities=16% Similarity=0.259 Sum_probs=155.6
Q ss_pred eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--c
Q psy8758 4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--P 81 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--~ 81 (198)
+.+++|++ ..+++++.|+.|++|++.+++....+.. .+...|.+++|+|+++.+++ ++.|+.|++||+.+... .
T Consensus 96 ~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~~~~~-~~~~~v~~v~~s~~~~~l~~-~~~dg~i~iwd~~~~~~~~~ 171 (401)
T 4aez_A 96 LNLLDWSN--LNVVAVALERNVYVWNADSGSVSALAET-DESTYVASVKWSHDGSFLSV-GLGNGLVDIYDVESQTKLRT 171 (401)
T ss_dssp CBCEEECT--TSEEEEEETTEEEEEETTTCCEEEEEEC-CTTCCEEEEEECTTSSEEEE-EETTSCEEEEETTTCCEEEE
T ss_pred EEEEeecC--CCEEEEECCCeEEEeeCCCCcEeEeeec-CCCCCEEEEEECCCCCEEEE-ECCCCeEEEEECcCCeEEEE
Confidence 44577775 4577888999999999998876554443 36778999999999998876 46899999999976542 2
Q ss_pred ccccc---------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce
Q psy8758 82 LNVHK---------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS 152 (198)
Q Consensus 82 ~~~~~---------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~ 152 (198)
+..|. +..+++++.|+.|++||++........+..|...|.+++|+|++++|++++.|+.|++||+++++.
T Consensus 172 ~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 251 (401)
T 4aez_A 172 MAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP 251 (401)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE
T ss_pred ecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc
Confidence 22332 357899999999999999965677888889999999999999999999999999999999999888
Q ss_pred eeEEeccCcccEEEEEEcCCCC-EEEEec--CCCeEEEEecCCCccc
Q psy8758 153 RDIYHTKRMQHVTHTVWSLDNK-FVISAS--DEMNLRVWKAHASEKL 196 (198)
Q Consensus 153 ~~~~~~~~~~~v~~~~~s~~~~-~l~~~~--~dg~v~~w~~~~~~~~ 196 (198)
...+ ..|...|.+++|+|++. ++++++ .|+.|++||+.+++.+
T Consensus 252 ~~~~-~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 252 KFTK-TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARV 297 (401)
T ss_dssp EEEE-CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEE
T ss_pred cEEe-cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEE
Confidence 7776 57889999999999775 566654 7999999999988764
No 91
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.2e-30 Score=187.73 Aligned_cols=178 Identities=8% Similarity=0.017 Sum_probs=142.7
Q ss_pred ECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC---------C
Q psy8758 9 WSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL---------N 79 (198)
Q Consensus 9 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~---------~ 79 (198)
+.++++++++|+.||.|++||+.+++....+. ...+.++.|+|+ + ++++.|+.+++|+.... .
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----~~~v~~~~~~~~---~-~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT----TPNPRTGGEHPA---I-ISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE----EECCCTTCCCCS---E-EEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe----cCCceeeeeCCc---e-EEecCCCeEEEEEccCceEEeecCCcc
Confidence 34578899999999999999999888766665 345788899998 4 45689999999976521 1
Q ss_pred -------------Cccccc---cCceEEEecCCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEeecCCcE
Q psy8758 80 -------------SPLNVH---KDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGGYDKSL 142 (198)
Q Consensus 80 -------------~~~~~~---~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~~d~~v 142 (198)
..+..+ .+..+++++.|+.|++||+++ ++.+... ..+...+.+++|+|++++|++|+.|+.|
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~-~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i 194 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYED-DSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGIL 194 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSS-SCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCE
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCC-CcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 001112 345789999999999999998 5555555 3455679999999999999999999999
Q ss_pred EEEEcCCCcee-eEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 143 RLYLAHQGHSR-DIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 143 ~v~d~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
++||+++++.. ..+..+|...|.+++|+|++.+|++++ |+.|++||+++++.+
T Consensus 195 ~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 195 DVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGT 248 (343)
T ss_dssp EEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTC
T ss_pred EEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcc
Confidence 99999999887 555334899999999999999999999 559999999988754
No 92
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.98 E-value=4.6e-31 Score=190.65 Aligned_cols=188 Identities=12% Similarity=0.184 Sum_probs=152.9
Q ss_pred cceeEEEECCC----CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCC-CCCeEEEEecCCccEEEEecc
Q psy8758 2 QHVTHTVWSLD----NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNP-MEAFVFTAANEDFNLYSYDIR 76 (198)
Q Consensus 2 ~~v~~~~~s~~----~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~~d~~ 76 (198)
+.|.+++|+|+ +++|++++.||.|++||+.+++....+.. |...|.+++|+| ++..+++ ++.|+.|++||++
T Consensus 70 ~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~s-~~~dg~i~iwd~~ 146 (366)
T 3k26_A 70 ENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG--HGNAINELKFHPRDPNLLLS-VSKDHALRLWNIQ 146 (366)
T ss_dssp CCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES--CCSCEEEEEECSSCTTEEEE-EETTSCEEEEETT
T ss_pred CcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC--CCCcEEEEEECCCCCCEEEE-EeCCCeEEEEEee
Confidence 46899999998 67999999999999999998876666553 578899999999 6776665 5789999999998
Q ss_pred CCCCcc-----cccc-----------CceEEEecCCCcEEEEEccCCCcceeee--------------------------
Q psy8758 77 QLNSPL-----NVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVH-------------------------- 114 (198)
Q Consensus 77 ~~~~~~-----~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~-------------------------- 114 (198)
+..... ..|. +..+++++.|+.|++||+++ .+....+
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS-KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS 225 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCS-HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEE
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCC-CccccccceeEEecCCCCcccccceeeccCccc
Confidence 654221 2232 34689999999999999986 3333322
Q ss_pred --cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce--------------eeEEeccCcccEEEEEEcCC--CCEE
Q psy8758 115 --KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS--------------RDIYHTKRMQHVTHTVWSLD--NKFV 176 (198)
Q Consensus 115 --~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~--------------~~~~~~~~~~~v~~~~~s~~--~~~l 176 (198)
..|...|.+++|+ ++++++++.|+.|++||+.++.. +..+ ..|...|.+++|+|+ +++|
T Consensus 226 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~~l 302 (366)
T 3k26_A 226 TRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRF-DYSQCDIWYMRFSMDFWQKML 302 (366)
T ss_dssp ECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEE-ECSSCCSSCCCCEECTTSSEE
T ss_pred cccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccc-cccCCcEEEEEEcCCCCCcEE
Confidence 2388999999998 77999999999999999988644 3333 577788999999999 9999
Q ss_pred EEecCCCeEEEEecCCCccc
Q psy8758 177 ISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 177 ~~~~~dg~v~~w~~~~~~~~ 196 (198)
++++.||.|++||+++++.+
T Consensus 303 ~~~~~dg~i~vwd~~~~~~~ 322 (366)
T 3k26_A 303 ALGNQVGKLYVWDLEVEDPH 322 (366)
T ss_dssp EEECTTSCEEEEECCSSSGG
T ss_pred EEEecCCcEEEEECCCCCCc
Confidence 99999999999999988643
No 93
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.98 E-value=6.3e-30 Score=201.96 Aligned_cols=190 Identities=16% Similarity=0.270 Sum_probs=161.8
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS- 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~- 80 (198)
++|.+++|+|++++|++++.||.|++||+.+++....+.. |...|.+++|+|+++.+++ ++.|+.|++||++....
T Consensus 56 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~-~~~dg~i~vw~~~~~~~~ 132 (814)
T 3mkq_A 56 TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA--HPDYIRSIAVHPTKPYVLS-GSDDLTVKLWNWENNWAL 132 (814)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC--CSSCEEEEEECSSSSEEEE-EETTSEEEEEEGGGTSEE
T ss_pred CcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEec--CCCCEEEEEEeCCCCEEEE-EcCCCEEEEEECCCCceE
Confidence 5799999999999999999999999999998887666644 5788999999999999876 56899999999876521
Q ss_pred --cccc----------c--cCceEEEecCCCcEEEEEccCCCcceeeecC-CCcceEEEEEcc--CCCEEEEeecCCcEE
Q psy8758 81 --PLNV----------H--KDMTSAAANEDFNLYSYDIRQLNSPLNVHKD-MTSAVTSVDYSP--TGREFVAGGYDKSLR 143 (198)
Q Consensus 81 --~~~~----------~--~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~sp--~~~~l~~~~~d~~v~ 143 (198)
.+.. + .+..+++++.|+.|++||+.. ..+...+.. +...+.+++|+| +++++++++.|+.|+
T Consensus 133 ~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~ 211 (814)
T 3mkq_A 133 EQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ-STPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211 (814)
T ss_dssp EEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTC-SSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEE
T ss_pred EEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEE
Confidence 1111 2 245799999999999999987 455555544 448899999999 999999999999999
Q ss_pred EEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 144 LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 144 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+||+.+++....+ .+|...|.+++|+|++++|++++.||.|++||+.+++.+
T Consensus 212 ~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~ 263 (814)
T 3mkq_A 212 IWDYQTKSCVATL-EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVE 263 (814)
T ss_dssp EEETTTTEEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEE
T ss_pred EEECCCCcEEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 9999999887776 678899999999999999999999999999999987654
No 94
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=6.2e-30 Score=186.41 Aligned_cols=184 Identities=9% Similarity=0.112 Sum_probs=143.3
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
..|.+++|+|++++|++++.|+.|++||+ +++....+.. |...|.+++|+|+++.++++++.|+.|++||+++....
T Consensus 164 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~--h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 240 (383)
T 3ei3_B 164 YWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKL--HKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK 240 (383)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEEC--SSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST
T ss_pred CCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEecc--CCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc
Confidence 45899999999999999999999999999 4554444443 57889999999999955555679999999999863210
Q ss_pred ---------------cccc--cCceEEEecCCCcEEEEEccCCCcceeeecCCC-----------------cceEEEEEc
Q psy8758 82 ---------------LNVH--KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT-----------------SAVTSVDYS 127 (198)
Q Consensus 82 ---------------~~~~--~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----------------~~i~~~~~s 127 (198)
+... .+..+++++.|+.|++||+++ ......+..|. ..+..++|+
T Consensus 241 ~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s 319 (383)
T 3ei3_B 241 NSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD-WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRY 319 (383)
T ss_dssp TCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB-TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECB
T ss_pred cceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC-CccccccccccccccccccceEEeccCCCCceEEEec
Confidence 1111 456799999999999999987 44444444332 234456777
Q ss_pred cCCCEEEEeecCCcEEEEEcCCCceeeEEecc-CcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758 128 PTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK-RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 192 (198)
Q Consensus 128 p~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~ 192 (198)
|++++ +++.|+.|++||+.+++.+..+... |...+..++|+|++++|++++ ||.|++||+++
T Consensus 320 ~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 320 PDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred CCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 77776 7789999999999999988877432 456778889999999999997 99999999975
No 95
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.9e-30 Score=200.57 Aligned_cols=189 Identities=12% Similarity=0.214 Sum_probs=154.8
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCc--eeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASE--KLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~ 77 (198)
++|++++|+|+++++++|+.||.|++||+..+. ....+. .|...|.+++|+|+ ++.+++ ++.||.|++||+.+
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~--~h~~~V~~l~~s~~~~~~~l~s-~s~Dg~I~vwd~~~ 86 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTILAS-CSYDGKVLIWKEEN 86 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCTTSCSEEEE-EETTSCEEEEEEET
T ss_pred ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceecc--CCcCceEEEEecCCCCCCEEEE-EeCCCeEEEEECCC
Confidence 679999999999999999999999999997443 222332 36888999999988 777766 56999999999986
Q ss_pred CC----Ccc----------cccc---CceEEEecCCCcEEEEEccCCC-cceeeecCCCcceEEEEEcc-----------
Q psy8758 78 LN----SPL----------NVHK---DMTSAAANEDFNLYSYDIRQLN-SPLNVHKDMTSAVTSVDYSP----------- 128 (198)
Q Consensus 78 ~~----~~~----------~~~~---~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~~sp----------- 128 (198)
.. ..+ ..++ +..+++++.|+.|++||++... .....+..|...+.+++|+|
T Consensus 87 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~ 166 (753)
T 3jro_A 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 166 (753)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------
T ss_pred CcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccccc
Confidence 53 111 1112 5689999999999999998732 34456678999999999999
Q ss_pred --CCCEEEEeecCCcEEEEEcCCCce----eeEEeccCcccEEEEEEcCC---CCEEEEecCCCeEEEEecCCCc
Q psy8758 129 --TGREFVAGGYDKSLRLYLAHQGHS----RDIYHTKRMQHVTHTVWSLD---NKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 129 --~~~~l~~~~~d~~v~v~d~~~~~~----~~~~~~~~~~~v~~~~~s~~---~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
+++++++++.||.|++||++++.. ... ..+|...|.+++|+|+ +++|++++.||.|++||+.+++
T Consensus 167 ~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~-~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 167 TKESRKFVTGGADNLVKIWKYNSDAQTYVLEST-LEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEE-ECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred CCCCCEEEEEECCCeEEEEeccCCcccceeeee-ecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 589999999999999999988742 233 3678899999999999 8999999999999999998864
No 96
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.2e-29 Score=177.55 Aligned_cols=185 Identities=16% Similarity=0.173 Sum_probs=155.5
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC--
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-- 79 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-- 79 (198)
++|++++| |++++|++++.||.|++||+.+++....+.. +...+.+++|+|+++.++++ +.|+.+++|++....
T Consensus 19 ~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~-~~dg~i~~~~~~~~~~~ 94 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYT--GQGFLNSVCYDSEKELLLFG-GKDTMINGVPLFATSGE 94 (313)
T ss_dssp SCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEE--CSSCEEEEEEETTTTEEEEE-ETTSCEEEEETTCCTTS
T ss_pred CCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeec--CCccEEEEEECCCCCEEEEe-cCCCeEEEEEeeecCCC
Confidence 57999999 9999999999999999999987765555544 57889999999999988775 689999999987542
Q ss_pred ---Ccccccc---------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-CCCEEEEeecCCcEEEEE
Q psy8758 80 ---SPLNVHK---------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYL 146 (198)
Q Consensus 80 ---~~~~~~~---------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~d~~v~v~d 146 (198)
..+..|. +..+++++.|+.|++|| . ......+..|...+.+++|+| +++.+++++.|+.|++||
T Consensus 95 ~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d 171 (313)
T 3odt_A 95 DPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--E-GSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ 171 (313)
T ss_dssp CC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--T-TEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred CcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--C-CcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe
Confidence 2223333 34689999999999999 2 577788888999999999998 899999999999999999
Q ss_pred cCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 147 AHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
..+....+...|...+.+++|+|++. +++++.||.|++||+++++.+
T Consensus 172 --~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~ 218 (313)
T 3odt_A 172 --NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVL 218 (313)
T ss_dssp --TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEE
T ss_pred --cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhh
Confidence 44555555445889999999999998 889999999999999988765
No 97
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-29 Score=178.99 Aligned_cols=184 Identities=16% Similarity=0.189 Sum_probs=151.8
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCC-CCCeEEEEecCCccEEEEeccCCCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNP-MEAFVFTAANEDFNLYSYDIRQLNS 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~~d~~~~~~ 80 (198)
+.|.+++| +++++++++.|+.|++|| .++....+.. +...+.++.|+| ++..+++ ++.|+.+++||......
T Consensus 105 ~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~~ 177 (313)
T 3odt_A 105 GNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQA--HNASVWDAKVVSFSENKFLT-ASADKTIKLWQNDKVIK 177 (313)
T ss_dssp SCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEEC--CSSCEEEEEEEETTTTEEEE-EETTSCEEEEETTEEEE
T ss_pred cCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEeccc--CCCceeEEEEccCCCCEEEE-EECCCCEEEEecCceEE
Confidence 46888999 678999999999999999 4444444433 577899999998 6777665 57999999999654333
Q ss_pred cccc-----------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758 81 PLNV-----------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ 149 (198)
Q Consensus 81 ~~~~-----------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~ 149 (198)
.+.. .++..+++++.|+.|++||+++ .+++..+..|...+.+++|+|++ .|++++.|+.|++||+++
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 178 TFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHT-GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp EECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTT
T ss_pred EEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCc-hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCC
Confidence 3222 2233489999999999999998 68888899999999999999999 588999999999999999
Q ss_pred CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
++....+ ..|...|.+++|+|+++ +++++.||.|++||+++++.+
T Consensus 256 ~~~~~~~-~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~ 300 (313)
T 3odt_A 256 GSLKQVI-TLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWA 300 (313)
T ss_dssp CCEEEEE-ECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCC
T ss_pred CceeEEE-eccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCcee
Confidence 9988877 57778999999999998 556889999999999987764
No 98
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.8e-30 Score=202.06 Aligned_cols=192 Identities=14% Similarity=0.196 Sum_probs=155.9
Q ss_pred cceeEEEECCC--CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC--CCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSLD--NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM--EAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~d~~i~~~d~~~ 77 (198)
++|.+++|+|+ ++++++++.||.|++||+.+++.........|...|.+++|+|+ +..+++ ++.|+.|++||++.
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~s-gs~dg~I~vwdl~~ 132 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLV-ASSDGKVSVVEFKE 132 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEE-EETTSEEEEEECCS
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEE-EeCCCcEEEEEeec
Confidence 57999999998 99999999999999999988763223333336788999999999 777766 56999999999976
Q ss_pred CCCc--------------cccc--------------cCceEEEecCCCcEEEEEccCCC---cceeeecCCCcceEEEEE
Q psy8758 78 LNSP--------------LNVH--------------KDMTSAAANEDFNLYSYDIRQLN---SPLNVHKDMTSAVTSVDY 126 (198)
Q Consensus 78 ~~~~--------------~~~~--------------~~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~i~~~~~ 126 (198)
.... +..+ .+..+++++.||.|++||++... .+...+..|...|.+++|
T Consensus 133 ~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~ 212 (753)
T 3jro_A 133 NGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (753)
T ss_dssp SSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred CCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEe
Confidence 5211 1111 25679999999999999998733 445667889999999999
Q ss_pred ccC---CCEEEEeecCCcEEEEEcCCCceee----EEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 127 SPT---GREFVAGGYDKSLRLYLAHQGHSRD----IYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 127 sp~---~~~l~~~~~d~~v~v~d~~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
+|+ ++++++++.||.|++||++++.... .....|...|.+++|+|+|++|++++.||.|++|++.++.
T Consensus 213 sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 213 SPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp CCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred ccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 999 8999999999999999999864211 1124577899999999999999999999999999998643
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=8e-30 Score=182.86 Aligned_cols=190 Identities=8% Similarity=0.060 Sum_probs=153.0
Q ss_pred cceeEEEECCCCc-eEEEeeCCCeEEEEEc-cCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC--
Q psy8758 2 QHVTHTVWSLDNK-FVISASDEMNLRVWKA-HASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ-- 77 (198)
Q Consensus 2 ~~v~~~~~s~~~~-~l~~~~~d~~i~i~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~-- 77 (198)
+.|.+++|+|+++ +|++++.||.|++||+ .+++. ..+....|...|.+++|+| +..+++ ++.|+.|++||+++
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s-~~~d~~i~iwd~~~~~ 133 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DDKLIA-ASWDGLIEVIDPRNYG 133 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEE-EETTSEEEEECHHHHT
T ss_pred CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CCEEEE-EcCCCeEEEEcccccc
Confidence 5789999999999 9999999999999999 77653 3333311578899999999 777776 56999999999876
Q ss_pred -------CCC--ccc---------cccCceEEEecCCCcEEEEEccC-CCcc-eeeecCCCcceEEEEEcc-CCCEEEEe
Q psy8758 78 -------LNS--PLN---------VHKDMTSAAANEDFNLYSYDIRQ-LNSP-LNVHKDMTSAVTSVDYSP-TGREFVAG 136 (198)
Q Consensus 78 -------~~~--~~~---------~~~~~~~~~~~~~~~i~~~d~~~-~~~~-~~~~~~~~~~i~~~~~sp-~~~~l~~~ 136 (198)
... .+. .+.+ .+++++.++.|++||++. .... ......+...+.+++|+| ++++++++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~ 212 (342)
T 1yfq_A 134 DGVIAVKNLNSNNTKVKNKIFTMDTNSS-RLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACS 212 (342)
T ss_dssp TBCEEEEESCSSSSSSCCCEEEEEECSS-EEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEE
T ss_pred cccccccCCeeeEEeeCCceEEEEecCC-cEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEE
Confidence 331 111 1122 288999999999999987 4332 334456788999999999 99999999
Q ss_pred ecCCcEEEEEcCCC------ceeeEEeccCc---------ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 137 GYDKSLRLYLAHQG------HSRDIYHTKRM---------QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 137 ~~d~~v~v~d~~~~------~~~~~~~~~~~---------~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+.|+.+++|+++.. +....+ ..|. ..|.+++|+|++++|++++.||.|++||+.+++++
T Consensus 213 ~~dg~i~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~ 286 (342)
T 1yfq_A 213 SIDGRVAVEFFDDQGDDYNSSKRFAF-RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKI 286 (342)
T ss_dssp ETTSEEEEEECCTTCCSTTCTTCEEE-ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEE
T ss_pred ecCCcEEEEEEcCCCcccccccceee-ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHh
Confidence 99999999999886 555555 4453 39999999999999999999999999999988765
No 100
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=1.7e-30 Score=213.07 Aligned_cols=190 Identities=11% Similarity=0.127 Sum_probs=166.8
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
..+.+++|+|+++++++|+.+|.|++|++.+++....+.. |...|.+++|+|+++.++++ +.|+.|++||+.+....
T Consensus 962 ~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~--h~~~v~~l~~s~dg~~l~s~-~~dg~i~vwd~~~~~~~ 1038 (1249)
T 3sfz_A 962 AQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVG--HKKAVRHIQFTADGKTLISS-SEDSVIQVWNWQTGDYV 1038 (1249)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCC--CSSCCCCEEECSSSSCEEEE-CSSSBEEEEETTTTEEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeeccc--CCCceEEEEECCCCCEEEEE-cCCCEEEEEECCCCceE
Confidence 3588999999999999999999999999998876555543 57789999999999998874 68999999998764321
Q ss_pred -----------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCC
Q psy8758 82 -----------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG 150 (198)
Q Consensus 82 -----------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~ 150 (198)
+....+..+++++.|+.+++||+.+ ++....+..|...+.+++|+|+++++++++.|+.|++||+.++
T Consensus 1039 ~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~ 1117 (1249)
T 3sfz_A 1039 FLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVIT-GRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLL 1117 (1249)
T ss_dssp CCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTT-TCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSS
T ss_pred EEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCC-CceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCc
Confidence 2223445688999999999999998 6888889999999999999999999999999999999999999
Q ss_pred ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 151 HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 151 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+....+ .+|...|.+++|+|+|++|++++.||.|++||+.+++.+
T Consensus 1118 ~~~~~l-~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~ 1162 (1249)
T 3sfz_A 1118 SPLHEL-KGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLL 1162 (1249)
T ss_dssp SCSBCC-CCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCC
T ss_pred ceeeee-ccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceE
Confidence 887766 688899999999999999999999999999999998865
No 101
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=7.9e-30 Score=188.80 Aligned_cols=192 Identities=12% Similarity=0.125 Sum_probs=149.9
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEcc---CCceeeeeeee-----e-----ecCceeeEE--eCCCCCeEEEEecC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAH---ASEKLGPIRKV-----V-----MSLRSNMVS--WNPMEAFVFTAANE 66 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~---~~~~~~~~~~~-----~-----~~~~v~~~~--~~~~~~~~~~~~~~ 66 (198)
++|.+++|+|++++|++++.||.|++||+. +++.......+ . +...+.++. ++|++..+++ ++.
T Consensus 112 ~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~ 190 (437)
T 3gre_A 112 STVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVA-LTN 190 (437)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEE-EET
T ss_pred CCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEE-EeC
Confidence 579999999999999999999999999995 44433322211 1 233455555 5567777765 579
Q ss_pred CccEEEEeccCCCCc--ccc--c-----------cCceEEEecCCCcEEEEEccCCCcceeeec-CCCcceEEEEEc---
Q psy8758 67 DFNLYSYDIRQLNSP--LNV--H-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTSVDYS--- 127 (198)
Q Consensus 67 d~~i~~~d~~~~~~~--~~~--~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~s--- 127 (198)
|+.|++||+++.... +.. | .+..+++++.|+.|++||+++ .+++..+. .|..+|.+++|+
T Consensus 191 d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~ 269 (437)
T 3gre_A 191 LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRF-NVLIRSWSFGDHAPITHVEVCQFY 269 (437)
T ss_dssp TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTT-TEEEEEEBCTTCEEEEEEEECTTT
T ss_pred CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCC-ccEEEEEecCCCCceEEEEecccc
Confidence 999999999865432 222 2 234689999999999999998 67777775 778899999665
Q ss_pred -cCCCEEEEeecCCcEEEEEcCCCceeeEEec-------------------------cCcccEEEEEEcCCCCEEEEecC
Q psy8758 128 -PTGREFVAGGYDKSLRLYLAHQGHSRDIYHT-------------------------KRMQHVTHTVWSLDNKFVISASD 181 (198)
Q Consensus 128 -p~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~-------------------------~~~~~v~~~~~s~~~~~l~~~~~ 181 (198)
|++++|++++.|+.|++||+++++....+.. .|...|.+++|+ ++++|++++.
T Consensus 270 s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~ 348 (437)
T 3gre_A 270 GKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEA 348 (437)
T ss_dssp CTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGG
T ss_pred CCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCC
Confidence 4677999999999999999999887766631 166779999999 7799999999
Q ss_pred CCeEEEEecCCCccc
Q psy8758 182 EMNLRVWKAHASEKL 196 (198)
Q Consensus 182 dg~v~~w~~~~~~~~ 196 (198)
|+.|++||+.+++.+
T Consensus 349 d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 349 TSSIVMFSLNELSSS 363 (437)
T ss_dssp GTEEEEEETTCGGGC
T ss_pred CCeEEEEECCCcccc
Confidence 999999999998765
No 102
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=4.4e-29 Score=184.17 Aligned_cols=190 Identities=14% Similarity=0.297 Sum_probs=156.3
Q ss_pred eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--c
Q psy8758 4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--P 81 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--~ 81 (198)
++.|+||++ +.|++|. |++|+|||..+++....+....|...|++++|+|+++++++ |+.|+.|++||+++... .
T Consensus 108 ~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~las-gs~Dg~v~iWd~~~~~~~~~ 184 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAV-GTSSAEVQLWDVQQQKRLRN 184 (420)
T ss_dssp CBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEE-EETTSCEEEEETTTTEEEEE
T ss_pred ceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEE-EECCCeEEEEEcCCCcEEEE
Confidence 567999975 5777664 89999999999987777766667778999999999998876 57999999999986543 2
Q ss_pred ccccc---------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce
Q psy8758 82 LNVHK---------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS 152 (198)
Q Consensus 82 ~~~~~---------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~ 152 (198)
+..|. +.++++++.|+.+++||.+.....+..+..|...+..+.++|+++++++++.|+.+++|+..+++.
T Consensus 185 ~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~ 264 (420)
T 4gga_A 185 MTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 264 (420)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSS
T ss_pred EeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccc
Confidence 23333 356899999999999999886677788899999999999999999999999999999999987653
Q ss_pred e---eEEeccCcccEEEEEEcCCCC-EEEE--ecCCCeEEEEecCCCccc
Q psy8758 153 R---DIYHTKRMQHVTHTVWSLDNK-FVIS--ASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 153 ~---~~~~~~~~~~v~~~~~s~~~~-~l~~--~~~dg~v~~w~~~~~~~~ 196 (198)
. ......|...|.+++|+|++. ++++ |+.|++|++||+.+++++
T Consensus 265 ~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~ 314 (420)
T 4gga_A 265 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACL 314 (420)
T ss_dssp CSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEE
T ss_pred cceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccc
Confidence 2 222367888999999999765 5554 468999999999998764
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=1.6e-29 Score=185.40 Aligned_cols=190 Identities=15% Similarity=0.180 Sum_probs=152.2
Q ss_pred eeEEEECCCCceE-EEeeCCCeEEEEEccCCcee-eeeee-eeecCceeeEEeCC-CCCeEEEEecCCccEEEEeccCCC
Q psy8758 4 VTHTVWSLDNKFV-ISASDEMNLRVWKAHASEKL-GPIRK-VVMSLRSNMVSWNP-MEAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 4 v~~~~~s~~~~~l-~~~~~d~~i~i~~~~~~~~~-~~~~~-~~~~~~v~~~~~~~-~~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
...++++|+...+ ++++.||.|++|++...... ..+.. ..|...|.+++|+| ++..+++ ++.|+.|++||+....
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s-~s~dg~v~vw~~~~~~ 115 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIAS-GSEDCTVMVWEIPDGG 115 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEE-EETTSEEEEEECCTTC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEE-EeCCCeEEEEEccCCC
Confidence 3457888877644 45788999999999654221 22222 23688999999999 7776665 5799999999998652
Q ss_pred ---------Ccccccc----------C--ceEEEecCCCcEEEEEccCCCcceeee--cCCCcceEEEEEccCCCEEEEe
Q psy8758 80 ---------SPLNVHK----------D--MTSAAANEDFNLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTGREFVAG 136 (198)
Q Consensus 80 ---------~~~~~~~----------~--~~~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~ 136 (198)
..+..|. . .++++++.|+.|++||+++ ++.+..+ ..|...|.+++|+|++++|+++
T Consensus 116 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 194 (402)
T 2aq5_A 116 LVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT-GAAVLTLGPDVHPDTIYSVDWSRDGALICTS 194 (402)
T ss_dssp CSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT-TEEEEEECTTTCCSCEEEEEECTTSSCEEEE
T ss_pred CccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC-CCccEEEecCCCCCceEEEEECCCCCEEEEE
Confidence 1222232 2 4799999999999999998 6777788 7899999999999999999999
Q ss_pred ecCCcEEEEEcCCCceeeEEeccCccc-EEEEEEcCCCCEEEEe---cCCCeEEEEecCCCcc
Q psy8758 137 GYDKSLRLYLAHQGHSRDIYHTKRMQH-VTHTVWSLDNKFVISA---SDEMNLRVWKAHASEK 195 (198)
Q Consensus 137 ~~d~~v~v~d~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~---~~dg~v~~w~~~~~~~ 195 (198)
+.|+.|++||+++++.+..+...|... +..+.|+|++++|+++ +.|+.|++||+++++.
T Consensus 195 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 195 CRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp ETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred ecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence 999999999999998887774566654 8999999999999998 7999999999988664
No 104
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=6.3e-29 Score=185.25 Aligned_cols=184 Identities=19% Similarity=0.287 Sum_probs=151.3
Q ss_pred eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--c
Q psy8758 4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--P 81 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--~ 81 (198)
+.++.+ +++++++|+.||.|++||+.+++....+.. |...|.+++|+|++ .+ ++|+.|+.|++||+++... .
T Consensus 125 ~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~--h~~~V~~l~~~~~~-~l-~s~s~dg~i~vwd~~~~~~~~~ 198 (464)
T 3v7d_B 125 ITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSG--HDGGVWALKYAHGG-IL-VSGSTDRTVRVWDIKKGCCTHV 198 (464)
T ss_dssp EEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECC--CSSCEEEEEECSTT-EE-EEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeC--CCcCEEEEEEcCCC-EE-EEEeCCCCEEEEECCCCcEEEE
Confidence 455555 578999999999999999998887666654 68889999999987 44 4567999999999986532 1
Q ss_pred cccc-------------cCceEEEecCCCcEEEEEccCCCcc----------------------eeeecCCCcceEEEEE
Q psy8758 82 LNVH-------------KDMTSAAANEDFNLYSYDIRQLNSP----------------------LNVHKDMTSAVTSVDY 126 (198)
Q Consensus 82 ~~~~-------------~~~~~~~~~~~~~i~~~d~~~~~~~----------------------~~~~~~~~~~i~~~~~ 126 (198)
+..| ....+++++.|+.|++||+++.... ...+.+|...+.++
T Consensus 199 ~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-- 276 (464)
T 3v7d_B 199 FEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV-- 276 (464)
T ss_dssp ECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--
T ss_pred ECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--
Confidence 2222 3357999999999999999863221 44566788878776
Q ss_pred ccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 127 SPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 127 sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+|+++++++++.|+.|++||+++++.+..+ .+|...|.+++|+|+++++++++.||.|++||+++++++
T Consensus 277 ~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 277 SGHGNIVVSGSYDNTLIVWDVAQMKCLYIL-SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp EEETTEEEEEETTSCEEEEETTTTEEEEEE-CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred cCCCCEEEEEeCCCeEEEEECCCCcEEEEe-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence 678999999999999999999999988877 678899999999999999999999999999999998765
No 105
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=3.3e-29 Score=176.81 Aligned_cols=183 Identities=9% Similarity=0.137 Sum_probs=128.7
Q ss_pred cceeEEEECCC----CceEEEeeC--------------------CCeEEEEEcc-CCceeeeeeeeeecCceeeEEeCC-
Q psy8758 2 QHVTHTVWSLD----NKFVISASD--------------------EMNLRVWKAH-ASEKLGPIRKVVMSLRSNMVSWNP- 55 (198)
Q Consensus 2 ~~v~~~~~s~~----~~~l~~~~~--------------------d~~i~i~~~~-~~~~~~~~~~~~~~~~v~~~~~~~- 55 (198)
+.|+.++|+|+ ++++++++. |+.|++|++. +++....+.. |...+..++|+|
T Consensus 112 ~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~--~~~~v~~l~fs~~ 189 (356)
T 2w18_A 112 REIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFL--MPPEETILTFAEV 189 (356)
T ss_dssp EEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEE--CCCSSCEEEEEEE
T ss_pred cceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeecc--CCCceeeEEeecc
Confidence 36888999999 777777653 7888888884 4554444443 456677888888
Q ss_pred --CCCeEEEEecCCccEEEEeccCCC--Ccccccc--------------Cce------------EEEecCCCcEEEEEcc
Q psy8758 56 --MEAFVFTAANEDFNLYSYDIRQLN--SPLNVHK--------------DMT------------SAAANEDFNLYSYDIR 105 (198)
Q Consensus 56 --~~~~~~~~~~~d~~i~~~d~~~~~--~~~~~~~--------------~~~------------~~~~~~~~~i~~~d~~ 105 (198)
+++.+++ ++.|++|++||+++.+ ..+..|. +.+ +++|+.|+++++||..
T Consensus 190 ~g~~~~LaS-gS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 190 QGMQEALLG-TTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp ETSTTEEEE-EETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred CCCCceEEE-ecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 5566665 5799999999998765 2232221 111 3678899999999998
Q ss_pred CCCcceeee-----cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccE-EEEEEcCCCCEEEEe
Q psy8758 106 QLNSPLNVH-----KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHV-THTVWSLDNKFVISA 179 (198)
Q Consensus 106 ~~~~~~~~~-----~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~ 179 (198)
+ ++.+..+ .+|...+.+..+ ++.++++++.|++|+|||+.+++++..+ .+|...+ ..++|+|||++|++|
T Consensus 269 t-gk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL-~gH~~~vvs~vafSPDG~~LaSG 344 (356)
T 2w18_A 269 T-TLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALL-PPVSDQHWSFVKWSGTDSHLLAG 344 (356)
T ss_dssp T-TEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEE-CCC--CCCCEEEECSSSSEEEEE
T ss_pred C-CEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEe-cCCCCCeEEEEEECCCCCEEEEE
Confidence 7 5655443 355555444444 4789999999999999999999999887 5666554 468999999999999
Q ss_pred cCCCeEEEEecC
Q psy8758 180 SDEMNLRVWKAH 191 (198)
Q Consensus 180 ~~dg~v~~w~~~ 191 (198)
+.|++|+|||+.
T Consensus 345 S~D~TIklWd~~ 356 (356)
T 2w18_A 345 QKDGNIFVYHYS 356 (356)
T ss_dssp CTTSCEEEEEEC
T ss_pred ECCCcEEEecCC
Confidence 999999999963
No 106
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=4.5e-29 Score=191.40 Aligned_cols=187 Identities=13% Similarity=0.143 Sum_probs=155.8
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCC----ceeeeeeeeeecCc-eeeEEeCC--CCCeEEEEecCCccEEEEe
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHAS----EKLGPIRKVVMSLR-SNMVSWNP--MEAFVFTAANEDFNLYSYD 74 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~----~~~~~~~~~~~~~~-v~~~~~~~--~~~~~~~~~~~d~~i~~~d 74 (198)
+.|.+++|+|+|++|++++ ++.+++|++.++ +....+.. |... |.+++|+| +++++++ ++.|+.|++||
T Consensus 19 ~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~--h~~~~v~~~~~sp~~~~~~l~s-~~~dg~v~vw~ 94 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTG--HGSSVVTTVKFSPIKGSQYLCS-GDESGKVIVWG 94 (615)
T ss_dssp TCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECT--TTTSCEEEEEECSSTTCCEEEE-EETTSEEEEEE
T ss_pred CceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEec--CCCceEEEEEECcCCCCCEEEE-ecCCCEEEEEe
Confidence 5689999999999999998 789999999877 55555443 5778 99999999 9998876 46899999999
Q ss_pred ccCC--------C--Cccccc-----------cCceEEEecCC----CcEEEEEccCCCcceeeecCCCcceEEEEEccC
Q psy8758 75 IRQL--------N--SPLNVH-----------KDMTSAAANED----FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT 129 (198)
Q Consensus 75 ~~~~--------~--~~~~~~-----------~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~ 129 (198)
+.+. . ..+..| .+..+++++.+ +.|++||. ++.+..+..|...|.+++|+|+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~---~~~~~~~~~~~~~v~~~~~~~~ 171 (615)
T 1pgu_A 95 WTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDS---GNSLGEVSGHSQRINACHLKQS 171 (615)
T ss_dssp EEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTT---CCEEEECCSCSSCEEEEEECSS
T ss_pred CCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC---CCcceeeecCCccEEEEEECCC
Confidence 9633 1 122222 23457777766 68888983 4677888899999999999999
Q ss_pred CC-EEEEeecCCcEEEEEcCCCceeeEEeccCcc---cEEEEEEcCC-CCEEEEecCCCeEEEEecCCCccc
Q psy8758 130 GR-EFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQ---HVTHTVWSLD-NKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 130 ~~-~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~---~v~~~~~s~~-~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
++ .+++++.|+.|++||+.+++....+ .+|.. .|.+++|+|+ +++|++++.||.|++||+++++.+
T Consensus 172 ~~~~l~~~~~d~~v~vwd~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 172 RPMRSMTVGDDGSVVFYQGPPFKFSASD-RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFL 242 (615)
T ss_dssp SSCEEEEEETTTEEEEEETTTBEEEEEE-CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEE
T ss_pred CCcEEEEEeCCCcEEEEeCCCcceeeee-cccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEe
Confidence 98 8999999999999999999888776 57877 8999999999 999999999999999999988764
No 107
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=6.5e-29 Score=180.25 Aligned_cols=148 Identities=11% Similarity=0.093 Sum_probs=112.1
Q ss_pred eeeEEeCCCCCeEEEE-ecCCccEEEEeccCCCCccc-----------cc-cCceEEEecCCCcEEEEEccCCCcce-ee
Q psy8758 48 SNMVSWNPMEAFVFTA-ANEDFNLYSYDIRQLNSPLN-----------VH-KDMTSAAANEDFNLYSYDIRQLNSPL-NV 113 (198)
Q Consensus 48 v~~~~~~~~~~~~~~~-~~~d~~i~~~d~~~~~~~~~-----------~~-~~~~~~~~~~~~~i~~~d~~~~~~~~-~~ 113 (198)
+..++|+||+++++++ ++.|+.|++||+++...... .. .+..+++++ ++.+.+|+..+..... ..
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s-~~~~~~~~~~~~~~~~~~~ 214 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYIT-GSSLEVISTVTGSCIARKT 214 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEEC-SSCEEEEETTTCCEEEEEC
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEecc-ceeEEEEEeccCcceeeee
Confidence 5678999999998654 45789999999986543221 11 234566666 4556666666522222 23
Q ss_pred ecCCCcceEEEEEccCCCEEEEeecCC----cEEEEEcCCCceeeE---EeccCcccEEEEEEcCCCCEEEEecCCCeEE
Q psy8758 114 HKDMTSAVTSVDYSPTGREFVAGGYDK----SLRLYLAHQGHSRDI---YHTKRMQHVTHTVWSLDNKFVISASDEMNLR 186 (198)
Q Consensus 114 ~~~~~~~i~~~~~sp~~~~l~~~~~d~----~v~v~d~~~~~~~~~---~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~ 186 (198)
...|...+.+++|+|+++++++++.|+ .+++|++........ ...+|...|++++|+|||++||+|+.|+.|+
T Consensus 215 ~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~ 294 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIA 294 (365)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEE
Confidence 456888999999999999999999887 688899887654321 2357888999999999999999999999999
Q ss_pred EEecCCCccc
Q psy8758 187 VWKAHASEKL 196 (198)
Q Consensus 187 ~w~~~~~~~~ 196 (198)
|||+++++++
T Consensus 295 iwd~~~~~~~ 304 (365)
T 4h5i_A 295 LVKLKDLSMS 304 (365)
T ss_dssp EEETTTTEEE
T ss_pred EEECCCCcEE
Confidence 9999998865
No 108
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1e-28 Score=177.08 Aligned_cols=188 Identities=11% Similarity=0.039 Sum_probs=151.0
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceee-eeeeeeecCceeeEEeCCCCC-eEEEEecCCccEEEEec-cCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLG-PIRKVVMSLRSNMVSWNPMEA-FVFTAANEDFNLYSYDI-RQL 78 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~~~~~~~~d~~i~~~d~-~~~ 78 (198)
+.|++++|+|++++|++++.|+.|++|++.+++... ......+...|.+++|+|+++ .+++ ++.|+.|++||+ ...
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~-~~~dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYV-GTVQGEILKVDLIGSP 90 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEE-EETTSCEEEECSSSSS
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEE-EcCCCeEEEEEeccCC
Confidence 579999999999999999999999999998776211 122224678899999999999 7766 568999999999 644
Q ss_pred CC-cccc--c----------cCceEEEecCCCcEEEEEccCC--------CcceeeecCCCcceEEEEEccCCCEEEEee
Q psy8758 79 NS-PLNV--H----------KDMTSAAANEDFNLYSYDIRQL--------NSPLNVHKDMTSAVTSVDYSPTGREFVAGG 137 (198)
Q Consensus 79 ~~-~~~~--~----------~~~~~~~~~~~~~i~~~d~~~~--------~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~ 137 (198)
.. .+.. | ++..+++++.|+.|++||+++. .+++..+. |...+.+++|+|++ +++++
T Consensus 91 ~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~ 167 (342)
T 1yfq_A 91 SFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGM 167 (342)
T ss_dssp SEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEE
T ss_pred ceEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEe
Confidence 31 1222 2 2567899999999999998751 23444454 88899999999987 99999
Q ss_pred cCCcEEEEEcCC-Cce-eeEEeccCcccEEEEEEcC-CCCEEEEecCCCeEEEEecCCC
Q psy8758 138 YDKSLRLYLAHQ-GHS-RDIYHTKRMQHVTHTVWSL-DNKFVISASDEMNLRVWKAHAS 193 (198)
Q Consensus 138 ~d~~v~v~d~~~-~~~-~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~~~~ 193 (198)
.|+.|++||+++ +.. .......|...+.+++|+| +++++++++.||.|++|+++.+
T Consensus 168 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 168 NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred CCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 999999999998 554 3333457778999999999 9999999999999999999876
No 109
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=3.3e-28 Score=180.21 Aligned_cols=180 Identities=18% Similarity=0.315 Sum_probs=152.4
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
++|.+++| +++++++|+.||.|++||+.+++....+.. |...|.+++|++ ..++ +++.|+.|++||+++....
T Consensus 174 ~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~l~~~~--~~l~-s~s~dg~i~vwd~~~~~~~ 246 (435)
T 1p22_A 174 GSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIH--HCEAVLHLRFNN--GMMV-TCSKDRSIAVWDMASPTDI 246 (435)
T ss_dssp SCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECC--CCSCEEEEECCT--TEEE-EEETTSCEEEEECSSSSCC
T ss_pred CcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcC--CCCcEEEEEEcC--CEEE-EeeCCCcEEEEeCCCCCCc
Confidence 46888888 788999999999999999998887666654 577899999975 3554 4679999999999865432
Q ss_pred -----ccccc---------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758 82 -----LNVHK---------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLA 147 (198)
Q Consensus 82 -----~~~~~---------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~ 147 (198)
+..|. +..+++++.|+.|++||+++ .+.+..+..|...+.++++ +++++++++.|+.|++||+
T Consensus 247 ~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~ 323 (435)
T 1p22_A 247 TLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDI 323 (435)
T ss_dssp EEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEET
T ss_pred eeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCc-CcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEEC
Confidence 22332 34689999999999999998 6888889999999999999 4689999999999999999
Q ss_pred CCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 148 HQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
++++.+..+ .+|...|.+++| ++++|++++.||.|++||+.+++
T Consensus 324 ~~~~~~~~~-~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 324 ECGACLRVL-EGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp TTCCEEEEE-CCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHT
T ss_pred CCCCEEEEE-eCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCC
Confidence 999988877 678899999999 78899999999999999997654
No 110
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-28 Score=176.25 Aligned_cols=186 Identities=12% Similarity=0.032 Sum_probs=139.7
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccC---------CceeeeeeeeeecCceeeEEeCC--CCCeEEEEecCCccE
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHA---------SEKLGPIRKVVMSLRSNMVSWNP--MEAFVFTAANEDFNL 70 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~---------~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~d~~i 70 (198)
+.|.++.|+|+ +++++.|+.+++|+... ++...... ..+...|.+++|+| +++++++ ++.|+.|
T Consensus 77 ~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~s-~s~dg~i 151 (343)
T 3lrv_A 77 PNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIE-VDSANEIIYMYGHNEVNTEYFIW-ADNRGTI 151 (343)
T ss_dssp ECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEE-CCCSSCEEEEECCC---CCEEEE-EETTCCE
T ss_pred CCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEee-cCCCCCEEEEEcCCCCCCCEEEE-EeCCCcE
Confidence 35677788888 99999999999997652 22222222 12457799999999 8888876 4699999
Q ss_pred EEEeccCCCCcc-------------ccc-cCceEEEecCCCcEEEEEccCCCcce-eeecC-CCcceEEEEEccCCCEEE
Q psy8758 71 YSYDIRQLNSPL-------------NVH-KDMTSAAANEDFNLYSYDIRQLNSPL-NVHKD-MTSAVTSVDYSPTGREFV 134 (198)
Q Consensus 71 ~~~d~~~~~~~~-------------~~~-~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~-~~~~i~~~~~sp~~~~l~ 134 (198)
++||+++..... ..+ .+.++++|+.|+.|++||+++ .+.+ ..+.. |..+|++++|+|++++|+
T Consensus 152 ~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~-~~~~~~~~~~~h~~~v~~l~fs~~g~~l~ 230 (343)
T 3lrv_A 152 GFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS-PDQASSRFPVDEEAKIKEVKFADNGYWMV 230 (343)
T ss_dssp EEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC-TTSCCEECCCCTTSCEEEEEECTTSSEEE
T ss_pred EEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-CCCCccEEeccCCCCEEEEEEeCCCCEEE
Confidence 999998654311 111 235788999999999999998 4554 67777 999999999999999999
Q ss_pred EeecCCcEEEEEcCCCceeeEEe--ccCcccE--EEEEEcCCCCEEEEecC-CCeEEEEecCCCc
Q psy8758 135 AGGYDKSLRLYLAHQGHSRDIYH--TKRMQHV--THTVWSLDNKFVISASD-EMNLRVWKAHASE 194 (198)
Q Consensus 135 ~~~~d~~v~v~d~~~~~~~~~~~--~~~~~~v--~~~~~s~~~~~l~~~~~-dg~v~~w~~~~~~ 194 (198)
+++ |+.|++||+++++....+. ..|...+ .+++|+|+|++|++++. |+.+++|++.++.
T Consensus 231 s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 231 VEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp EEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred EEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 999 5599999999987654331 1232333 36999999999999888 9999999986553
No 111
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.7e-29 Score=185.76 Aligned_cols=184 Identities=11% Similarity=0.129 Sum_probs=141.7
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCcee-----------------------------eeeeeeeecCceeeEE
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL-----------------------------GPIRKVVMSLRSNMVS 52 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~-----------------------------~~~~~~~~~~~v~~~~ 52 (198)
..|.+++|||||+++|+++.|++|+ |...++.+ ..+ ...+...|.+++
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~-~~~~~~~V~~va 92 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLL-NSQPVCYPRVCK 92 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSS-TTSCSCCEEEEE
T ss_pred ccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEe-ecCCCCcEEEEE
Confidence 3588999999999999999999996 43332211 111 112356799999
Q ss_pred eCCCCCeEEEEecCCccEEEEeccCCCCccc---------------cccCceEEEecCCCcEEEEEccCCCc-------c
Q psy8758 53 WNPMEAFVFTAANEDFNLYSYDIRQLNSPLN---------------VHKDMTSAAANEDFNLYSYDIRQLNS-------P 110 (198)
Q Consensus 53 ~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~---------------~~~~~~~~~~~~~~~i~~~d~~~~~~-------~ 110 (198)
|+|+|..++++ +.||.+++||.......+. ...+..+++++.||+|++||+.. +. .
T Consensus 93 wSPdG~~LAs~-s~dg~V~iwd~~~~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~-~~l~~~~~i~ 170 (588)
T 2j04_A 93 PSPIDDWMAVL-SNNGNVSVFKDNKMLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRK-NSENTPEFYF 170 (588)
T ss_dssp ECSSSSCEEEE-ETTSCEEEEETTEEEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCC-CTTTCCCCEE
T ss_pred ECCCCCEEEEE-eCCCcEEEEeCCceeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCC-Ccccccccee
Confidence 99999999875 6999999999432111111 12345799999999999999987 33 2
Q ss_pred eeee----cCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCcee---eEEeccCcccEEEEEEcCCCCEEEEecCCC
Q psy8758 111 LNVH----KDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSR---DIYHTKRMQHVTHTVWSLDNKFVISASDEM 183 (198)
Q Consensus 111 ~~~~----~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~---~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 183 (198)
+..+ .+|...|.+++|+|+| +++++.|++|++||+..+... ..+..+|...|.+++|+ |+.||+++ ++
T Consensus 171 l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~ 245 (588)
T 2j04_A 171 ESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PG 245 (588)
T ss_dssp EEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SS
T ss_pred eeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CC
Confidence 4555 5677899999999999 888899999999999887743 33434787899999999 68899887 69
Q ss_pred eEEEEecCCCcc
Q psy8758 184 NLRVWKAHASEK 195 (198)
Q Consensus 184 ~v~~w~~~~~~~ 195 (198)
.|++||+.+++.
T Consensus 246 tIkLWd~~~~~~ 257 (588)
T 2j04_A 246 YVHKIDLKNYSI 257 (588)
T ss_dssp EEEEEETTTTEE
T ss_pred eEEEEECCCCeE
Confidence 999999998775
No 112
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.7e-27 Score=176.47 Aligned_cols=181 Identities=14% Similarity=0.264 Sum_probs=150.1
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-- 80 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-- 80 (198)
.|.+++| +++++++|+.||.|++||+.+++....+.. |...|.+++| +++.+++ |+.||.|++||+.+...
T Consensus 135 ~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~--~~~~l~s-g~~dg~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 135 GVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTG--HTGSVLCLQY--DERVIIT-GSSDSTVRVWDVNTGEMLN 207 (435)
T ss_dssp CEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECC--CSSCEEEEEC--CSSEEEE-EETTSCEEEEESSSCCEEE
T ss_pred cEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcC--CCCcEEEEEE--CCCEEEE-EcCCCeEEEEECCCCcEEE
Confidence 4667666 799999999999999999998887666654 5778999998 5666655 67999999999986542
Q ss_pred cccccc---------CceEEEecCCCcEEEEEccCCCcce---eeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758 81 PLNVHK---------DMTSAAANEDFNLYSYDIRQLNSPL---NVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH 148 (198)
Q Consensus 81 ~~~~~~---------~~~~~~~~~~~~i~~~d~~~~~~~~---~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~ 148 (198)
.+..|. +..+++++.|+.|++||+++ .... ..+.+|...+.+++| +++++++++.|+.|++||++
T Consensus 208 ~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~ 284 (435)
T 1p22_A 208 TLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMAS-PTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTS 284 (435)
T ss_dssp EECCCCSCEEEEECCTTEEEEEETTSCEEEEECSS-SSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred EEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCC-CCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECC
Confidence 222222 34789999999999999987 3333 567789999999999 78899999999999999999
Q ss_pred CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+++.+..+ .+|...|.++.| +++++++++.||.|++||+++++++
T Consensus 285 ~~~~~~~~-~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~ 329 (435)
T 1p22_A 285 TCEFVRTL-NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACL 329 (435)
T ss_dssp TCCEEEEE-ECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEE
T ss_pred cCcEEEEE-cCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEE
Confidence 99988877 578899999998 4679999999999999999988765
No 113
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6e-28 Score=180.27 Aligned_cols=180 Identities=14% Similarity=0.128 Sum_probs=143.1
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeee---cCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVM---SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL 78 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~ 78 (198)
..|.+++|||+|++||+++.||.+++||.+. ....+. +.. ...+.+++|+|+|+.|+++ +.||+|++||+...
T Consensus 86 ~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsg-s~DGtVkIWd~~~~ 161 (588)
T 2j04_A 86 CYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVG-NEDGELQFFSIRKN 161 (588)
T ss_dssp CCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEE-ETTSEEEEEECCCC
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEE-cCCCEEEEEECCCC
Confidence 4699999999999999999999999999543 333332 210 2258999999999999875 69999999998865
Q ss_pred CC---------cc----ccc----------cCceEEEecCCCcEEEEEccCCCc--ceeee-cCCCcceEEEEEccCCCE
Q psy8758 79 NS---------PL----NVH----------KDMTSAAANEDFNLYSYDIRQLNS--PLNVH-KDMTSAVTSVDYSPTGRE 132 (198)
Q Consensus 79 ~~---------~~----~~~----------~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~-~~~~~~i~~~~~sp~~~~ 132 (198)
.. .+ .+| ++. +++++.|+.+++||+..... ....+ ..|...|.+++|+ |+.
T Consensus 162 ~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~ 238 (588)
T 2j04_A 162 SENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYK 238 (588)
T ss_dssp TTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTE
T ss_pred ccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCE
Confidence 31 11 222 234 88999999999999987321 22445 4788899999999 688
Q ss_pred EEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEE--cCCCCEEEEecCCCeEEEEecC
Q psy8758 133 FVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVW--SLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 133 l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
||+++ +++|++||+..++..... .+|...+..++| +|+++.++++++||+ ++|..+
T Consensus 239 LASa~-~~tIkLWd~~~~~~~~~~-~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 239 VVLTC-PGYVHKIDLKNYSISSLK-TGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEEEC-SSEEEEEETTTTEEEEEE-CSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEEe-CCeEEEEECCCCeEEEEE-cCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 98887 699999999988775443 379999999999 999999999999999 999875
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=1e-26 Score=169.72 Aligned_cols=188 Identities=10% Similarity=0.029 Sum_probs=150.8
Q ss_pred cceeEEEECCCCceE-EEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758 2 QHVTHTVWSLDNKFV-ISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~ 80 (198)
..+.+++|+|+++++ ++++.|+.|++||+.+++....+.. ...+.+++|+|+++.++++++.++.|++||+.+...
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~---~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~ 108 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA---GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV 108 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC---SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC---CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeE
Confidence 357899999999976 5667899999999988876555443 447899999999999988887889999999986542
Q ss_pred cc-----------c--cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEE-EEeecCCcEEEEE
Q psy8758 81 PL-----------N--VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREF-VAGGYDKSLRLYL 146 (198)
Q Consensus 81 ~~-----------~--~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~~~d~~v~v~d 146 (198)
.. . .....++++++.++.|++||+.+ ++.+..+..+ ..+.+++|+|+++.+ ++++.++.|++||
T Consensus 109 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d 186 (391)
T 1l0q_A 109 AGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT-KAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVID 186 (391)
T ss_dssp EEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 11 1 11223457888999999999987 5666666654 456999999999977 5777899999999
Q ss_pred cCCCceeeEEeccCcccEEEEEEcCCCCEEEEec---CCCeEEEEecCCCccc
Q psy8758 147 AHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS---DEMNLRVWKAHASEKL 196 (198)
Q Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~dg~v~~w~~~~~~~~ 196 (198)
+++++....+ .+...+.+++|+|++++|++++ .++.|++||+++++.+
T Consensus 187 ~~~~~~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~ 237 (391)
T 1l0q_A 187 TVTNSVIDTV--KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT 237 (391)
T ss_dssp TTTTEEEEEE--ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE
T ss_pred CCCCeEEEEE--ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE
Confidence 9999887766 3446889999999999988877 6899999999988754
No 115
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.96 E-value=3.9e-27 Score=174.91 Aligned_cols=177 Identities=20% Similarity=0.318 Sum_probs=149.8
Q ss_pred ECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--cccccc
Q psy8758 9 WSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--PLNVHK 86 (198)
Q Consensus 9 ~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--~~~~~~ 86 (198)
++++|+++++|+.||.|++||+.+++....+.. |...|.+++|+ +..+++ ++.|+.|++||+.+... .+..|.
T Consensus 125 ~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~--h~~~v~~~~~~--~~~l~s-~~~dg~i~vwd~~~~~~~~~~~~h~ 199 (445)
T 2ovr_B 125 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG--HTGGVWSSQMR--DNIIIS-GSTDRTLKVWNAETGECIHTLYGHT 199 (445)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTCCEEEECCC--CSSCEEEEEEE--TTEEEE-EETTSCEEEEETTTTEEEEEECCCS
T ss_pred EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcC--CCCCEEEEEec--CCEEEE-EeCCCeEEEEECCcCcEEEEECCCC
Confidence 455789999999999999999998887666654 57889999997 345554 67999999999976542 222333
Q ss_pred ---------CceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe
Q psy8758 87 ---------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH 157 (198)
Q Consensus 87 ---------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~ 157 (198)
+..+++++.|+.|++||+++ ++.+..+..|...+.+++| +++++++++.|+.|++||+++++.+..+
T Consensus 200 ~~v~~~~~~~~~l~s~s~dg~i~~wd~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~- 275 (445)
T 2ovr_B 200 STVRCMHLHEKRVVSGSRDATLRVWDIET-GQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTL- 275 (445)
T ss_dssp SCEEEEEEETTEEEEEETTSEEEEEESSS-CCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEE-
T ss_pred CcEEEEEecCCEEEEEeCCCEEEEEECCC-CcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEe-
Confidence 34689999999999999998 6788888899999999999 7889999999999999999999888877
Q ss_pred ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 158 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 158 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
.+|...|.+++| +++++++++.||.|++||+++++.+
T Consensus 276 ~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 276 QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI 312 (445)
T ss_dssp CCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEE
T ss_pred cCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEE
Confidence 678899999999 7889999999999999999988764
No 116
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-26 Score=184.88 Aligned_cols=182 Identities=13% Similarity=0.136 Sum_probs=144.1
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS- 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~- 80 (198)
.+|.+++|+| |++|++++.|+.|++||+.+++....+. +...|.+++|+|+++++++ |+.|+.|++||+++...
T Consensus 59 ~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~---~~~~V~~v~~sp~g~~l~s-gs~dg~V~lwd~~~~~~~ 133 (902)
T 2oaj_A 59 SAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF---VPGKITSIDTDASLDWMLI-GLQNGSMIVYDIDRDQLS 133 (902)
T ss_dssp CCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE---CSSCEEEEECCTTCSEEEE-EETTSCEEEEETTTTEEE
T ss_pred CCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc---CCCCEEEEEECCCCCEEEE-EcCCCcEEEEECCCCccc
Confidence 4699999999 8899999999999999999887665553 5678999999999999876 57999999999976431
Q ss_pred ------------ccccc----------c--CceEEEecCCCcEEEEEccCCCcceeeecCC------------------C
Q psy8758 81 ------------PLNVH----------K--DMTSAAANEDFNLYSYDIRQLNSPLNVHKDM------------------T 118 (198)
Q Consensus 81 ------------~~~~~----------~--~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~------------------~ 118 (198)
....| + ...+++++.|+.+ +||+++ .+++..+..| .
T Consensus 134 ~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~h~ 211 (902)
T 2oaj_A 134 SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE-NEIKQSFIYELPPFAPGGDFSEKTNEKRT 211 (902)
T ss_dssp EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT-TEEEEEECCCBCTTCCCSTTCCCTTSCBC
T ss_pred cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC-CceEEEEecccCCcCCCcccccccccccC
Confidence 11122 1 2578899999999 999998 5666666544 4
Q ss_pred cceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe----c-------------cCcccEEEEEEc----CCC-CEE
Q psy8758 119 SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH----T-------------KRMQHVTHTVWS----LDN-KFV 176 (198)
Q Consensus 119 ~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~----~-------------~~~~~v~~~~~s----~~~-~~l 176 (198)
..|.+++|+|+|++|++++.|+.|++||+++++++.... . .|...|.+++|+ |++ .+|
T Consensus 212 ~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll 291 (902)
T 2oaj_A 212 PKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLL 291 (902)
T ss_dssp CCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEE
T ss_pred CCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEE
Confidence 679999999999999999999999999999988765311 0 134579999995 443 567
Q ss_pred EEecCC-----CeEEEEec
Q psy8758 177 ISASDE-----MNLRVWKA 190 (198)
Q Consensus 177 ~~~~~d-----g~v~~w~~ 190 (198)
++++.| ..+.+|++
T Consensus 292 ~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 292 ISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEEECSTTSSCCCEEEEEE
T ss_pred EeCCCCCCCCCceEEEEec
Confidence 777665 37888885
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=6e-26 Score=165.65 Aligned_cols=187 Identities=13% Similarity=0.089 Sum_probs=148.5
Q ss_pred ceeEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 3 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
.+.+++|+|++++++++ +.++.|++||+.+++....+. +...+.+++|+|+++.++++++.++.|++||+.+....
T Consensus 75 ~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK---TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE---CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe---CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 57899999999987654 467999999999887654443 34568999999999999777888999999998764321
Q ss_pred --c-----------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee---cCCcEEEE
Q psy8758 82 --L-----------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG---YDKSLRLY 145 (198)
Q Consensus 82 --~-----------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~---~d~~v~v~ 145 (198)
+ ......+++++..++.|++||+++ .+....+. +...+.+++|+|+++++++++ .++.|++|
T Consensus 152 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 152 NTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT-NSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp EEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred EEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 1 111223457888999999999987 55555554 456789999999999998887 68999999
Q ss_pred EcCCCceeeEEeccCcccEEEEEEcCCCCEE-EEecCCCeEEEEecCCCccc
Q psy8758 146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFV-ISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~v~~w~~~~~~~~ 196 (198)
|+.+++.+..+.. + ..+.+++|+|++++| ++++.|+.|++||+.+++.+
T Consensus 230 d~~~~~~~~~~~~-~-~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 230 DTGTNKITARIPV-G-PDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTIT 279 (391)
T ss_dssp ETTTTEEEEEEEC-C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred ECCCCeEEEEEec-C-CCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEE
Confidence 9999988777633 3 468899999999977 56788999999999988764
No 118
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.96 E-value=3.3e-26 Score=169.89 Aligned_cols=182 Identities=18% Similarity=0.192 Sum_probs=150.3
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
.+|.+++| +++++++++.||.|++||+.+++....+.. |...+.++.| ++..+++ ++.|+.|++||+++....
T Consensus 240 ~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~~-~~~d~~i~i~d~~~~~~~ 312 (445)
T 2ovr_B 240 AAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQG--HTNRVYSLQF--DGIHVVS-GSLDTSIRVWDVETGNCI 312 (445)
T ss_dssp SCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECC--CSSCEEEEEE--CSSEEEE-EETTSCEEEEETTTCCEE
T ss_pred ccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecC--CCCceEEEEE--CCCEEEE-EeCCCeEEEEECCCCCEE
Confidence 46788888 788999999999999999988876666553 5678899998 6677765 568999999999865432
Q ss_pred --cccc---------cCceEEEecCCCcEEEEEccCCCcceeeecC---CCcceEEEEEccCCCEEEEeecCCcEEEEEc
Q psy8758 82 --LNVH---------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKD---MTSAVTSVDYSPTGREFVAGGYDKSLRLYLA 147 (198)
Q Consensus 82 --~~~~---------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~ 147 (198)
+..| .+..+++++.|+.|++||+++ ++++..+.. |...|.+++|+ ++++++++.||.|++||+
T Consensus 313 ~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~ 389 (445)
T 2ovr_B 313 HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKT-GQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDL 389 (445)
T ss_dssp EEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTT-CCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEET
T ss_pred EEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCC-CcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEEC
Confidence 2222 234789999999999999988 677777765 78899999996 579999999999999999
Q ss_pred CCCceeeEEe----ccCcccEEEEEEcCCCCEEEEecCCCe----EEEEecCCC
Q psy8758 148 HQGHSRDIYH----TKRMQHVTHTVWSLDNKFVISASDEMN----LRVWKAHAS 193 (198)
Q Consensus 148 ~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~~~~~dg~----v~~w~~~~~ 193 (198)
.+++.+..+. .+|...|++++|+|++.++++++.||. +.+||++..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 390 KTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp TTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred CCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 9998877662 366789999999999999999999997 999999753
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=2.3e-26 Score=166.31 Aligned_cols=189 Identities=7% Similarity=0.139 Sum_probs=142.7
Q ss_pred ceeEEEECCCCceE-EEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCC------------------------
Q psy8758 3 HVTHTVWSLDNKFV-ISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPME------------------------ 57 (198)
Q Consensus 3 ~v~~~~~s~~~~~l-~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------------------ 57 (198)
.+..+++.++++.+ ++++.|+.|++||+.+++....+. +...|.++.|+++.
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~---~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~ 136 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK---VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDD 136 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE---CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCC
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE---CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEe
Confidence 46678899988877 567788999999998887655443 35567777777642
Q ss_pred -----------CeEEEE-ecCCccEEEEeccCCC------------------CccccccC-----------ceEEEecCC
Q psy8758 58 -----------AFVFTA-ANEDFNLYSYDIRQLN------------------SPLNVHKD-----------MTSAAANED 96 (198)
Q Consensus 58 -----------~~~~~~-~~~d~~i~~~d~~~~~------------------~~~~~~~~-----------~~~~~~~~~ 96 (198)
..++++ |+.+|.|++||++... ..+..|.. ..+++++.|
T Consensus 137 ~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d 216 (355)
T 3vu4_A 137 IRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQD 216 (355)
T ss_dssp EEEEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred ccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCC
Confidence 234443 6788999999988632 23444433 469999999
Q ss_pred Cc-EEEEEccCCCcceeeec-C-CCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeE------------------
Q psy8758 97 FN-LYSYDIRQLNSPLNVHK-D-MTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDI------------------ 155 (198)
Q Consensus 97 ~~-i~~~d~~~~~~~~~~~~-~-~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~------------------ 155 (198)
++ |++||+++ ++.+..+. + |...|.+++|+|++++|++++.|++|++||++.+.....
T Consensus 217 ~~~v~iwd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (355)
T 3vu4_A 217 GTIIRVFKTED-GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSL 295 (355)
T ss_dssp CSEEEEEETTT-CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCS
T ss_pred CCEEEEEECCC-CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccce
Confidence 98 99999998 67788887 5 999999999999999999999999999999986532111
Q ss_pred ----EeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 156 ----YHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 156 ----~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
+..........++|+|++++|++++.||.+++|++..++.
T Consensus 296 ~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 296 CNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp EEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEETT
T ss_pred eEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 0011112346689999999999999999999999876543
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=3.3e-27 Score=172.89 Aligned_cols=186 Identities=8% Similarity=0.046 Sum_probs=123.5
Q ss_pred EECCCCceEEEeeCCCeEEEEEccCCceeee--eeee-eecCceeeEEeCC--------CCCeEEEEecCCccEEEEecc
Q psy8758 8 VWSLDNKFVISASDEMNLRVWKAHASEKLGP--IRKV-VMSLRSNMVSWNP--------MEAFVFTAANEDFNLYSYDIR 76 (198)
Q Consensus 8 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~--~~~~-~~~~~v~~~~~~~--------~~~~~~~~~~~d~~i~~~d~~ 76 (198)
.++++++++++++.|++|+|||..+++.... +... .|...|.+++|+| +++.|++ ++.|++|++||++
T Consensus 96 ~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las-~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 96 SSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIAS-VGDDCTLIIWRLT 174 (393)
T ss_dssp -CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEE-EETTSEEEEEEEE
T ss_pred ecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEE-EECCCeEEEEECC
Confidence 3445667899999999999999988764322 2222 2788999999998 5566655 6799999999997
Q ss_pred CCCCc------------cccc--cCceEEEecCCCcEEEEEccCCCccee-------------------------eecCC
Q psy8758 77 QLNSP------------LNVH--KDMTSAAANEDFNLYSYDIRQLNSPLN-------------------------VHKDM 117 (198)
Q Consensus 77 ~~~~~------------~~~~--~~~~~~~~~~~~~i~~~d~~~~~~~~~-------------------------~~~~~ 117 (198)
+.... +..+ ....+++++.|++|++||+++. +... ...+|
T Consensus 175 ~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 253 (393)
T 4gq1_A 175 DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLN-LSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI 253 (393)
T ss_dssp TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCC-C----------CSCCCSEEEESGGGC------CC
T ss_pred CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCC-cccccccccCCcccceEEecccccceeeeecccc
Confidence 54321 1222 2247999999999999999863 2211 12356
Q ss_pred CcceEEEEEc-cCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEE------------------EEEcC--CCCEE
Q psy8758 118 TSAVTSVDYS-PTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTH------------------TVWSL--DNKFV 176 (198)
Q Consensus 118 ~~~i~~~~~s-p~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~------------------~~~s~--~~~~l 176 (198)
...+.++.|+ |+++.+++++.|+.+++||+..++....+ ..|...+.. ..|+| ++.++
T Consensus 254 ~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
T 4gq1_A 254 ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEI-SDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFA 332 (393)
T ss_dssp SSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSSCTTEEE
T ss_pred cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceE-eeecCccccEEEccccccccccCcceeEEEccCCCCEEE
Confidence 6778889986 79999999999999999999877654443 222222222 23333 34467
Q ss_pred EEecCCCeEEEEecCCCccc
Q psy8758 177 ISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 177 ~~~~~dg~v~~w~~~~~~~~ 196 (198)
++++.||.|++||+.+++.+
T Consensus 333 ~sgs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 333 TAHSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp EEETTTTEEEEEETTCTTCC
T ss_pred EEECCCCEEEEEECCCCcEE
Confidence 78899999999999988764
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=5.5e-27 Score=165.52 Aligned_cols=144 Identities=13% Similarity=0.110 Sum_probs=110.8
Q ss_pred ceeEEEECC---CCceEEEeeCCCeEEEEEccCCceeeeeeeee-ecCceeeEEeCCCCCeEE-----------EEecCC
Q psy8758 3 HVTHTVWSL---DNKFVISASDEMNLRVWKAHASEKLGPIRKVV-MSLRSNMVSWNPMEAFVF-----------TAANED 67 (198)
Q Consensus 3 ~v~~~~~s~---~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~-----------~~~~~d 67 (198)
.++.++|+| ++++|++++.|++|+|||+.+++.+..+..+. +...+.+++|+|++..++ ++|+.|
T Consensus 180 ~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D 259 (356)
T 2w18_A 180 EETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPV 259 (356)
T ss_dssp SSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CC
T ss_pred ceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCC
Confidence 356677777 66789999999999999999999888876432 234567789999998774 457789
Q ss_pred ccEEEEeccCCCCc--c-----ccccC---------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceE-EEEEccCC
Q psy8758 68 FNLYSYDIRQLNSP--L-----NVHKD---------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVT-SVDYSPTG 130 (198)
Q Consensus 68 ~~i~~~d~~~~~~~--~-----~~~~~---------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~-~~~~sp~~ 130 (198)
+++++||..+.+.. + .+|.. ..+++++.|++|++||+.+ ++.+.++++|...+. +++|+|||
T Consensus 260 ~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG 338 (356)
T 2w18_A 260 FQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTD 338 (356)
T ss_dssp EEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTT-CSEEEEECCC--CCCCEEEECSSS
T ss_pred cEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCC-CcEEEEecCCCCCeEEEEEECCCC
Confidence 99999998866421 1 23322 2578899999999999998 788999988877655 68999999
Q ss_pred CEEEEeecCCcEEEEEc
Q psy8758 131 REFVAGGYDKSLRLYLA 147 (198)
Q Consensus 131 ~~l~~~~~d~~v~v~d~ 147 (198)
++|++|+.|++|+|||+
T Consensus 339 ~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 339 SHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp SEEEEECTTSCEEEEEE
T ss_pred CEEEEEECCCcEEEecC
Confidence 99999999999999996
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.95 E-value=2.2e-25 Score=164.67 Aligned_cols=189 Identities=10% Similarity=0.064 Sum_probs=150.3
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
+.|.+++|+|+++++++++.|+.|++||+.+++....+.. +...+.+++|+|+++.++++++.++.|++||+++....
T Consensus 170 ~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~ 247 (433)
T 3bws_A 170 GFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDL--TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI 247 (433)
T ss_dssp CEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEEC--SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcC--CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE
Confidence 3688999999999999999999999999988876655543 46678999999999999888778999999998754321
Q ss_pred c-----------ccc-cCceEEEec--------CCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEE-EEeecCC
Q psy8758 82 L-----------NVH-KDMTSAAAN--------EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREF-VAGGYDK 140 (198)
Q Consensus 82 ~-----------~~~-~~~~~~~~~--------~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l-~~~~~d~ 140 (198)
. ... .+..+++++ .|+.|++||+++ ++.+..+ .+...+.+++|+|+++.+ ++++.|+
T Consensus 248 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~-~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~ 325 (433)
T 3bws_A 248 RKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK-EKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCS 325 (433)
T ss_dssp EECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT-TEEEEEE-EEEECEEEEEECSSTTEEEEEETTTT
T ss_pred EEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC-CcEEeec-cCCCCcceEEECCCCCEEEEEecCCC
Confidence 1 111 223455555 588999999987 4554444 456688999999999755 6668899
Q ss_pred cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecC---------------CCeEEEEecCCCccc
Q psy8758 141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASD---------------EMNLRVWKAHASEKL 196 (198)
Q Consensus 141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~---------------dg~v~~w~~~~~~~~ 196 (198)
.|++||+.+++....+ .+...+.+++|+|+++++++++. ||.|++||+.+++.+
T Consensus 326 ~v~v~d~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~ 394 (433)
T 3bws_A 326 KIEVYDLKEKKVQKSI--PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVK 394 (433)
T ss_dssp EEEEEETTTTEEEEEE--ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEE
T ss_pred EEEEEECCCCcEEEEe--cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEE
Confidence 9999999998887766 35578999999999998887765 579999999988764
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=2.9e-24 Score=158.71 Aligned_cols=184 Identities=9% Similarity=0.063 Sum_probs=145.3
Q ss_pred cceeEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec-------CCccEEEE
Q psy8758 2 QHVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN-------EDFNLYSY 73 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-------~d~~i~~~ 73 (198)
..+.+++|+|++++++++ +.|+.|++||+.+++....+.. ...+.+++|+|+++.+++++. .|+.|++|
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~ 288 (433)
T 3bws_A 212 KWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDK---IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIY 288 (433)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCC---CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEE
T ss_pred CCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecC---CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEE
Confidence 357899999999988544 4799999999988776544433 455899999999999888653 58899999
Q ss_pred eccCCCCc-------------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec--
Q psy8758 74 DIRQLNSP-------------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-- 138 (198)
Q Consensus 74 d~~~~~~~-------------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-- 138 (198)
|+++.... +......++++++.++.+++||+.+ ++.+..+. +...+.+++|+|+++++++++.
T Consensus 289 d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~ 366 (433)
T 3bws_A 289 SMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE-KKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGP 366 (433)
T ss_dssp ETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSSEEEEEECTTSSEEEEEECCC
T ss_pred ECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC-CcEEEEec-CCCCCCeEEEcCCCCEEEEEecCC
Confidence 98764321 1111224677889999999999997 56666665 6677999999999998888776
Q ss_pred -------------CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEec-CCCeEEEEecCC
Q psy8758 139 -------------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHA 192 (198)
Q Consensus 139 -------------d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~~ 192 (198)
||.|++||+.+++....+.. ...+.+++|+|+|++|++++ .|+.|++|+++.
T Consensus 367 ~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 367 NHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA--GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred CccccccccccccceEEEEEECCCCcEEEEecC--CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 57999999999988877633 36799999999999988776 499999999864
No 124
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=1.4e-24 Score=154.05 Aligned_cols=148 Identities=15% Similarity=0.240 Sum_probs=116.9
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeee---------------------------------------e
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRK---------------------------------------V 42 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~---------------------------------------~ 42 (198)
..|++++|+|+++++++|+.||.|++|++.+++....+.. .
T Consensus 68 ~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~ 147 (318)
T 4ggc_A 68 EYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLS 147 (318)
T ss_dssp CCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred CeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEc
Confidence 3589999999999999999999999999988765433221 1
Q ss_pred eecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc------ccc-----------------------c-------
Q psy8758 43 VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL------NVH-----------------------K------- 86 (198)
Q Consensus 43 ~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~------~~~-----------------------~------- 86 (198)
.|...+..+.|+++++.+++ ++.|+.|++||+++..... ..+ .
T Consensus 148 ~~~~~~~~~~~~~~~~~l~s-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lw 226 (318)
T 4ggc_A 148 GHSQEVCGLRWAPDGRHLAS-GGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 226 (318)
T ss_dssp CCSSCEEEEEECTTSSEEEE-EETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEE
T ss_pred CccCceEEEEEcCCCCEEEE-EecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEE
Confidence 14556788889999998876 5699999999987543110 000 0
Q ss_pred -------------------------Cc--eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC
Q psy8758 87 -------------------------DM--TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD 139 (198)
Q Consensus 87 -------------------------~~--~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d 139 (198)
.. ++++++.|+.|++||+++ ++++..+.+|...|++++|+|++++|++++.|
T Consensus 227 d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~-~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D 305 (318)
T 4ggc_A 227 NVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDGATVASAAAD 305 (318)
T ss_dssp ETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred ecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecC
Confidence 00 133456899999999998 78899999999999999999999999999999
Q ss_pred CcEEEEEcCCCc
Q psy8758 140 KSLRLYLAHQGH 151 (198)
Q Consensus 140 ~~v~v~d~~~~~ 151 (198)
++|++||+.+..
T Consensus 306 ~~v~iWd~~~~d 317 (318)
T 4ggc_A 306 ETLRLWRCFELD 317 (318)
T ss_dssp TEEEEECCSCCC
T ss_pred CeEEEEECCCCC
Confidence 999999997653
No 125
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=7.1e-24 Score=151.70 Aligned_cols=152 Identities=13% Similarity=0.163 Sum_probs=121.0
Q ss_pred ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-------ccccccC-----------------------------
Q psy8758 44 MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-------PLNVHKD----------------------------- 87 (198)
Q Consensus 44 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-------~~~~~~~----------------------------- 87 (198)
|.+.|++++|+|++..++++|+.|++|++||+..... .+.+|..
T Consensus 37 H~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~ 116 (340)
T 4aow_A 37 HNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLT 116 (340)
T ss_dssp CSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeec
Confidence 7889999999998654455567999999999875432 1222221
Q ss_pred ------------------------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC--CEEEEeecCCc
Q psy8758 88 ------------------------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG--REFVAGGYDKS 141 (198)
Q Consensus 88 ------------------------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~--~~l~~~~~d~~ 141 (198)
..+++++.|+.+++||+............|...+..++|++++ .++++++.|+.
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~ 196 (340)
T 4aow_A 117 TGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKL 196 (340)
T ss_dssp TTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSC
T ss_pred ccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCE
Confidence 1266777777777887765334444556788899999999875 47889999999
Q ss_pred EEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 142 LRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 142 v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
|++||+++++....+ .+|...|.+++|+|++++|++++.||.|++||+++++.+
T Consensus 197 i~i~d~~~~~~~~~~-~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~ 250 (340)
T 4aow_A 197 VKVWNLANCKLKTNH-IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHL 250 (340)
T ss_dssp EEEEETTTTEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEE
T ss_pred EEEEECCCCceeeEe-cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCcee
Confidence 999999999888776 688999999999999999999999999999999988764
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.7e-23 Score=154.21 Aligned_cols=185 Identities=13% Similarity=0.077 Sum_probs=138.7
Q ss_pred cceeEEEECCCCceEEEeeCCC---eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCcc--EEEEecc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEM---NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFN--LYSYDIR 76 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~---~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~--i~~~d~~ 76 (198)
+.|.+++|+|+|++|++++.++ .|++||+.+++.. .+. .+...+.+++|+|+++.++.+++.++. |++||+.
T Consensus 179 ~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~--~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~ 255 (415)
T 2hqs_A 179 QPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVA--SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA 255 (415)
T ss_dssp SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEE--CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-Eee--cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC
Confidence 4688999999999999998875 9999999887653 232 245678999999999999876666554 9999987
Q ss_pred CCCC-ccccc-----------cCceEEEecC-CC--cEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC--
Q psy8758 77 QLNS-PLNVH-----------KDMTSAAANE-DF--NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD-- 139 (198)
Q Consensus 77 ~~~~-~~~~~-----------~~~~~~~~~~-~~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d-- 139 (198)
+... .+..+ .+..++.++. ++ .|++||+.. ++ ...+..+...+.+++|+|+|++|++++.+
T Consensus 256 ~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g 333 (415)
T 2hqs_A 256 SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING-GA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGG 333 (415)
T ss_dssp TCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-SC-CEECCCSSSEEEEEEECTTSSEEEEEEECSS
T ss_pred CCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC-CC-EEEEecCCCcccCeEECCCCCEEEEEECcCC
Confidence 5432 11111 1233554444 44 677788876 33 44555567788999999999999988764
Q ss_pred -CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC---eEEEEecCCCc
Q psy8758 140 -KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM---NLRVWKAHASE 194 (198)
Q Consensus 140 -~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg---~v~~w~~~~~~ 194 (198)
..|++||+.+++.... ..+ ..+.+++|+|+|++|++++.++ .|++||+..++
T Consensus 334 ~~~i~~~d~~~~~~~~l--~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 334 QQHIAKQDLATGGVQVL--SST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp CEEEEEEETTTCCEEEC--CCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred ceEEEEEECCCCCEEEe--cCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc
Confidence 5899999999877443 334 3899999999999998887776 79999997554
No 127
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=1.4e-24 Score=160.78 Aligned_cols=160 Identities=16% Similarity=0.173 Sum_probs=120.1
Q ss_pred ceeEEEECCCCceEE----EeeCCCeEEEEEccCC--------ceeeeeeee-eecCceeeEEeCCCCCeEEEEecCCcc
Q psy8758 3 HVTHTVWSLDNKFVI----SASDEMNLRVWKAHAS--------EKLGPIRKV-VMSLRSNMVSWNPMEAFVFTAANEDFN 69 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~----~~~~d~~i~i~~~~~~--------~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d~~ 69 (198)
.|.+++|+|+|++|+ +++.|+.|++||+.++ +....+... .|...|.+++|+|+...++++++.|+.
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~ 173 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS 173 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe
Confidence 599999999999999 7889999999998754 111122222 257789999999985444455678999
Q ss_pred EEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758 70 LYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ 149 (198)
Q Consensus 70 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~ 149 (198)
|++||+++. ........|...+.+++|+|+|++|++++.|+.|++||++
T Consensus 174 v~iwD~~~~------------------------------~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~- 222 (434)
T 2oit_A 174 IAVLQVTET------------------------------VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT- 222 (434)
T ss_dssp EEEEEESSS------------------------------EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-
T ss_pred EEEEEcCCC------------------------------cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-
Confidence 988888753 3334445678899999999999999999999999999998
Q ss_pred CceeeEEec------cCcccEEEEEEcCCCCEEEEe-cCCC------eEEEEecCCC
Q psy8758 150 GHSRDIYHT------KRMQHVTHTVWSLDNKFVISA-SDEM------NLRVWKAHAS 193 (198)
Q Consensus 150 ~~~~~~~~~------~~~~~v~~~~~s~~~~~l~~~-~~dg------~v~~w~~~~~ 193 (198)
++....+.. .|...+.+++|++++.++++. ..|| .+++|++...
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 223 LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 444443311 233489999999998887543 3443 3899999765
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.93 E-value=1.4e-24 Score=160.71 Aligned_cols=168 Identities=12% Similarity=0.071 Sum_probs=126.5
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCc----------eee---eeeeeeecCceeeEEeCCCCCeEEE---EecC
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASE----------KLG---PIRKVVMSLRSNMVSWNPMEAFVFT---AANE 66 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~----------~~~---~~~~~~~~~~v~~~~~~~~~~~~~~---~~~~ 66 (198)
.++.+++++++.++++++.++ +++|+..... ... ......+...|.+++|+|+++++++ +++.
T Consensus 38 ~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~ 116 (434)
T 2oit_A 38 RSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEY 116 (434)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTT
T ss_pred CccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCC
Confidence 478899999999999999887 8898764210 000 0111224567999999999999985 5678
Q ss_pred CccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC-CCEEEEeecCCcEEEE
Q psy8758 67 DFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT-GREFVAGGYDKSLRLY 145 (198)
Q Consensus 67 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~-~~~l~~~~~d~~v~v~ 145 (198)
|+.|++||+++...... ........+..+.+|...|.+++|+|+ +.+|++++.|++|++|
T Consensus 117 d~~v~iwd~~~~~~~~~-------------------~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iw 177 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAK-------------------QQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVL 177 (434)
T ss_dssp EEEEEEEEHHHHHCTTC-------------------SSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred CceEEEEEccccccCCc-------------------CCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEE
Confidence 99999999864210000 000000123455678999999999998 7899999999999999
Q ss_pred EcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758 146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
|++++...... .+|...|.+++|+|+|++|++++.||.|++||++
T Consensus 178 D~~~~~~~~~~-~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 178 QVTETVKVCAT-LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EESSSEEEEEE-ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred EcCCCcceeec-cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 99998665443 4678899999999999999999999999999998
No 129
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.93 E-value=7.7e-24 Score=151.46 Aligned_cols=150 Identities=16% Similarity=0.197 Sum_probs=122.6
Q ss_pred ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc----------------ccccc---CceEEEecCCCcEEEEEc
Q psy8758 44 MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP----------------LNVHK---DMTSAAANEDFNLYSYDI 104 (198)
Q Consensus 44 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~----------------~~~~~---~~~~~~~~~~~~i~~~d~ 104 (198)
|...|.+++|+|++++++++ +.|+.|++||+...... +..++ +..+++++.|+.|++||+
T Consensus 10 H~~~v~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~ 88 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATC-SSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEE 88 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEE-ETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred cccceeEEEEcCCCCEEEEe-eCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEec
Confidence 68889999999999988764 68999999999854311 11122 568999999999999999
Q ss_pred cCCC--------cceeeecCCCcceEEEEEccC--CCEEEEeecCCcEEEEEcCCCcee---------------------
Q psy8758 105 RQLN--------SPLNVHKDMTSAVTSVDYSPT--GREFVAGGYDKSLRLYLAHQGHSR--------------------- 153 (198)
Q Consensus 105 ~~~~--------~~~~~~~~~~~~i~~~~~sp~--~~~l~~~~~d~~v~v~d~~~~~~~--------------------- 153 (198)
+... +++..+..|...+.+++|+|+ +++|++++.|+.|++||+++++..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (351)
T 3f3f_A 89 DPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQ 168 (351)
T ss_dssp CTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSC
T ss_pred CCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCccc
Confidence 8732 446777889999999999999 999999999999999998765421
Q ss_pred --------------------------------------eEEeccCcccEEEEEEcCCC----CEEEEecCCCeEEEEecC
Q psy8758 154 --------------------------------------DIYHTKRMQHVTHTVWSLDN----KFVISASDEMNLRVWKAH 191 (198)
Q Consensus 154 --------------------------------------~~~~~~~~~~v~~~~~s~~~----~~l~~~~~dg~v~~w~~~ 191 (198)
.....+|...|.+++|+|++ ++|++++.||.|++||++
T Consensus 169 ~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 169 SDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp CCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred ceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence 11123578899999999998 899999999999999998
Q ss_pred CCc
Q psy8758 192 ASE 194 (198)
Q Consensus 192 ~~~ 194 (198)
++.
T Consensus 249 ~~~ 251 (351)
T 3f3f_A 249 EKL 251 (351)
T ss_dssp ECC
T ss_pred CCc
Confidence 754
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=1.2e-22 Score=142.40 Aligned_cols=191 Identities=14% Similarity=0.069 Sum_probs=138.1
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccC-CceeeeeeeeeecCceeeEEeCCCCCeEEEEec-CC--ccEEEEeccC
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHA-SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN-ED--FNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~d--~~i~~~d~~~ 77 (198)
+.|.+++|+|+|++|++++ ++.|++||+.+ ++....... .....+.+++|+|+++.+++++. .+ ..|+.++...
T Consensus 42 ~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~ 119 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTG-FATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTG 119 (297)
T ss_dssp SCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCT-TCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTC
T ss_pred cceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccc-cccccccceEECCCCCEEEEEEeCCCCcceEEEEECCC
Confidence 4688999999999999886 78999999988 654333322 12356789999999999988652 22 4455555543
Q ss_pred CCCc-c-----------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee-cCCcEEE
Q psy8758 78 LNSP-L-----------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YDKSLRL 144 (198)
Q Consensus 78 ~~~~-~-----------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~d~~v~v 144 (198)
.... + ......+++++..++.+.+|++.........+..+...+.+++|+|++++|+.++ .++.+++
T Consensus 120 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i 199 (297)
T 2ojh_A 120 GTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQI 199 (297)
T ss_dssp CCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred CceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccE
Confidence 3211 1 1112234457788898999997543455566777888899999999999887766 5889999
Q ss_pred EEcC-CCceeeEEeccCcccEEEEEEcCCCCEEEEecCC-----------CeEEEEecCCCcc
Q psy8758 145 YLAH-QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE-----------MNLRVWKAHASEK 195 (198)
Q Consensus 145 ~d~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----------g~v~~w~~~~~~~ 195 (198)
|++. .+.....+ ..+...+..++|+|+|++|++++.+ +.|++||+++++.
T Consensus 200 ~~~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 200 WRVRVDGSSVERI-TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEEETTSSCEEEC-CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred EEECCCCCCcEEE-ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 9986 34444433 5566789999999999998887655 5699999988764
No 131
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=9.6e-22 Score=141.40 Aligned_cols=190 Identities=8% Similarity=0.012 Sum_probs=146.5
Q ss_pred ceeEEEECCCCceEEEeeC-------CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758 3 HVTHTVWSLDNKFVISASD-------EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI 75 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~-------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~ 75 (198)
.+..++|+|+++++++++. ++.|.+||..+++....+.. ...+..++|+|+++.++++...++.|.+||.
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN---DLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE---SSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec---CCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 4678999999998888763 56899999988876555543 4457889999999988888777899999998
Q ss_pred cCCCCc--ccc-------------------c-cCc-eEEEe-cCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCC
Q psy8758 76 RQLNSP--LNV-------------------H-KDM-TSAAA-NEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGR 131 (198)
Q Consensus 76 ~~~~~~--~~~-------------------~-~~~-~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~ 131 (198)
.+.... +.. . .+. ++++. ..++.|.+||+.+ .+....+..+...+..++|+|+++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~s~dg~ 197 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN-IKLKTAIQNTGKMSTGLALDSEGK 197 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT-TEEEEEECCCCTTCCCCEEETTTT
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC-CceEEEecCCCCccceEEECCCCC
Confidence 754421 111 1 112 33343 4578899999987 566666664556688999999999
Q ss_pred EEEEeecCCcEEEEEcCCCceeeEEec---cCcccEEEEEEcCCCCEEEEec-CCCeEEEEecCCCccc
Q psy8758 132 EFVAGGYDKSLRLYLAHQGHSRDIYHT---KRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKL 196 (198)
Q Consensus 132 ~l~~~~~d~~v~v~d~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~~~~~~ 196 (198)
++++++.++.+.+||+.+++....+.. ++...+..++|+|++++++.++ .++.|.+||+.+++.+
T Consensus 198 ~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 266 (353)
T 3vgz_A 198 RLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNIL 266 (353)
T ss_dssp EEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEE
T ss_pred EEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 999999999999999999988776643 2445688999999999776655 4599999999988764
No 132
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=8.8e-22 Score=140.59 Aligned_cols=183 Identities=12% Similarity=0.050 Sum_probs=136.0
Q ss_pred ceeEEEECCCCceEEEee------------CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccE
Q psy8758 3 HVTHTVWSLDNKFVISAS------------DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNL 70 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~------------~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i 70 (198)
.+.+++|+|+|++++++. .++.|.+||+.+++....+.. ...+..++|+|+++.++++ ++.+
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~---~~~i 156 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA---PRQITMLAWARDGSKLYGL---GRDL 156 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC---CSSCCCEEECTTSSCEEEE---SSSE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC---CCCcceeEECCCCCEEEEe---CCeE
Confidence 467899999999888886 579999999988765444432 4557889999999988875 5789
Q ss_pred EEEeccCCCCc--cccc-----------cCceEEEecCCC-----------------------cEEEEEccCCCcc-eee
Q psy8758 71 YSYDIRQLNSP--LNVH-----------KDMTSAAANEDF-----------------------NLYSYDIRQLNSP-LNV 113 (198)
Q Consensus 71 ~~~d~~~~~~~--~~~~-----------~~~~~~~~~~~~-----------------------~i~~~d~~~~~~~-~~~ 113 (198)
.+||+.+.... +..+ ...+++++..++ .|.+||+.+ ++. ...
T Consensus 157 ~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-~~~~~~~ 235 (337)
T 1pby_B 157 HVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET-GEMAMRE 235 (337)
T ss_dssp EEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTT-CCEEEEE
T ss_pred EEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCC-CCceEee
Confidence 99998754321 1100 011222222222 478999987 333 233
Q ss_pred ecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758 114 HKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS 193 (198)
Q Consensus 114 ~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~ 193 (198)
+..+...+.+++|+|++++++++ ++.|.+||+.+++....+..+ ..+.+++|+|+|++|++++.++.|.+||+.++
T Consensus 236 ~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 236 VRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP--HSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp EEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS--SCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred cCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC--CceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 34556678899999999999888 799999999999887766433 46789999999999888888999999999998
Q ss_pred ccc
Q psy8758 194 EKL 196 (198)
Q Consensus 194 ~~~ 196 (198)
+.+
T Consensus 312 ~~~ 314 (337)
T 1pby_B 312 EKK 314 (337)
T ss_dssp CEE
T ss_pred cEE
Confidence 765
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=2.1e-21 Score=147.38 Aligned_cols=183 Identities=7% Similarity=0.097 Sum_probs=137.5
Q ss_pred eeEEEECCCCceEEEeeCCCeEEEEEc--cCCceeeeeeeeeecCceeeEEeCC----CCCeEEEEecCCccEEEEeccC
Q psy8758 4 VTHTVWSLDNKFVISASDEMNLRVWKA--HASEKLGPIRKVVMSLRSNMVSWNP----MEAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d~~i~i~~~--~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~d~~i~~~d~~~ 77 (198)
+..++|+|+|+++++++.|+.|++||+ .+++....+. ....+..++|+| ++++++++...+++|.+||..+
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~---~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t 257 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK---IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET 257 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE---CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe---cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc
Confidence 678999999999999999999999999 6766555444 355678999999 9999988765689999999875
Q ss_pred CCCc--ccc----------c-------------cCceEEEecCCCcEEEEEccCCCccee--eecCCCcceEEEEEccCC
Q psy8758 78 LNSP--LNV----------H-------------KDMTSAAANEDFNLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTG 130 (198)
Q Consensus 78 ~~~~--~~~----------~-------------~~~~~~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~ 130 (198)
.+.. +.. | ....+++...+++|.+||..+. +.+. .+ .+...+..++|+|+|
T Consensus 258 ~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~-~~l~~~~i-~~~~~~~~~~~spdg 335 (543)
T 1nir_A 258 LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDI-DNLTVTSI-GAAPFLHDGGWDSSH 335 (543)
T ss_dssp CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTS-SSCEEEEE-ECCSSCCCEEECTTS
T ss_pred cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCC-CcceeEEe-ccCcCccCceECCCC
Confidence 4321 110 1 2345677788999999999873 3333 33 345667889999999
Q ss_pred CEEEEe-ecCCcEEEEEcCCCceeeEEecc---CcccEEEEEEcCC-CCEEEEec-CCCeEEEEecCC
Q psy8758 131 REFVAG-GYDKSLRLYLAHQGHSRDIYHTK---RMQHVTHTVWSLD-NKFVISAS-DEMNLRVWKAHA 192 (198)
Q Consensus 131 ~~l~~~-~~d~~v~v~d~~~~~~~~~~~~~---~~~~v~~~~~s~~-~~~l~~~~-~dg~v~~w~~~~ 192 (198)
++++++ ..+++|.+||+.++++...+..+ |.+....+ ++|+ +..++++. .|++|.+||+.+
T Consensus 336 ~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 336 RYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 977655 46899999999999988877432 54433333 4777 66677765 689999999988
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=3.4e-22 Score=156.77 Aligned_cols=189 Identities=13% Similarity=0.143 Sum_probs=137.3
Q ss_pred cceeEEEECCCCceEEEeeC-CC-----eEEEEEccCCceeeeeeeeeec----------------------CceeeEEe
Q psy8758 2 QHVTHTVWSLDNKFVISASD-EM-----NLRVWKAHASEKLGPIRKVVMS----------------------LRSNMVSW 53 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~-d~-----~i~i~~~~~~~~~~~~~~~~~~----------------------~~v~~~~~ 53 (198)
+.+.+++|||||++|++++. |+ .|++||+.+++....+...... ..+.+++|
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQW 116 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEE
Confidence 35889999999999999988 88 8999999888754444322111 23789999
Q ss_pred CCCCCeEEEEecCCccEEEEeccCC---C-Ccccccc-----------CceEEEecCCCcEEEEEccCCCcceeeecCCC
Q psy8758 54 NPMEAFVFTAANEDFNLYSYDIRQL---N-SPLNVHK-----------DMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT 118 (198)
Q Consensus 54 ~~~~~~~~~~~~~d~~i~~~d~~~~---~-~~~~~~~-----------~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 118 (198)
+||++.+++++. +.|++||+.+. . ..+..+. +..++.++ ++.|++||+.+ ++.......+.
T Consensus 117 SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~-g~~~~~~~~~~ 192 (741)
T 2ecf_A 117 SPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLAS-GRQMQLTADGS 192 (741)
T ss_dssp CTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTT-TEEEECCCCCC
T ss_pred CCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCC-CCEEEeccCCc
Confidence 999999988653 89999999865 2 2222221 12344444 46899999987 44443333332
Q ss_pred cc----------------eEEEEEccCCCEEEEeecCC---------------------------------cEEEEEcCC
Q psy8758 119 SA----------------VTSVDYSPTGREFVAGGYDK---------------------------------SLRLYLAHQ 149 (198)
Q Consensus 119 ~~----------------i~~~~~sp~~~~l~~~~~d~---------------------------------~v~v~d~~~ 149 (198)
.. +..++|||||++|++++.|+ .|++||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 22 47799999999999987765 789999988
Q ss_pred -CceeeEEec-cCcccEEEEEEcCCCCEEEEecC-----CCeEEEEecCCCcc
Q psy8758 150 -GHSRDIYHT-KRMQHVTHTVWSLDNKFVISASD-----EMNLRVWKAHASEK 195 (198)
Q Consensus 150 -~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~-----dg~v~~w~~~~~~~ 195 (198)
++....... .|...+..++| |||++|+.++. +..|++||+.+++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~ 324 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQ 324 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCE
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCce
Confidence 776544322 46778999999 99999886643 57899999998764
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=8.6e-21 Score=135.77 Aligned_cols=190 Identities=11% Similarity=0.151 Sum_probs=130.4
Q ss_pred ceeEEEECCCCceEEEeeC-CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC-CCC
Q psy8758 3 HVTHTVWSLDNKFVISASD-EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ-LNS 80 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~-~~~ 80 (198)
.+..++|+|+|+++++++. ++.|.+||+.++..............+.+++|+|+++.+++++..++.|.+||+.. ...
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 4678999999998877664 88999999964433333333334456889999999999988765789999999976 321
Q ss_pred ------ccc-----------cc-cC-ceEEEecCCCcEEEEEccCC-Ccc--eeeec---CC---CcceEEEEEccCCCE
Q psy8758 81 ------PLN-----------VH-KD-MTSAAANEDFNLYSYDIRQL-NSP--LNVHK---DM---TSAVTSVDYSPTGRE 132 (198)
Q Consensus 81 ------~~~-----------~~-~~-~~~~~~~~~~~i~~~d~~~~-~~~--~~~~~---~~---~~~i~~~~~sp~~~~ 132 (198)
... .+ .+ .+++++..++.+.+|++... +.. ..... .. ...+..++|+|+|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 165 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 244 (343)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCE
Confidence 111 11 11 24556668899999999641 221 22222 11 235678999999997
Q ss_pred EEE-eecCCcEEEEEcC--CCc--eeeEEeccCcccEEEEEEcCCCCEEEEec-CCCeEEEEecC--CCc
Q psy8758 133 FVA-GGYDKSLRLYLAH--QGH--SRDIYHTKRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAH--ASE 194 (198)
Q Consensus 133 l~~-~~~d~~v~v~d~~--~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~--~~~ 194 (198)
|++ ...++.|.+||+. ++. .+..+ ..+ ..+..++|+|+|++|++++ .++.|.+|+++ +++
T Consensus 245 l~v~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 245 LYACDRTASLITVFSVSEDGSVLSKEGFQ-PTE-TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGL 312 (343)
T ss_dssp EEEEETTTTEEEEEEECTTSCCEEEEEEE-ECS-SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTE
T ss_pred EEEEecCCCEEEEEEEcCCCCceEEeeee-cCC-CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCce
Confidence 774 4578999999998 333 33333 222 3488999999999888776 68999999554 553
No 136
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=1.8e-20 Score=134.82 Aligned_cols=191 Identities=12% Similarity=0.091 Sum_probs=129.9
Q ss_pred ceeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeeeec----------CceeeEEeCCCCCeEEEEecCCccEE
Q psy8758 3 HVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVMS----------LRSNMVSWNPMEAFVFTAANEDFNLY 71 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~----------~~v~~~~~~~~~~~~~~~~~~d~~i~ 71 (198)
.+..++|+|+|++|++++ .++.+.+|++........+...... ..+.+++|+|+++ ++++...++.|.
T Consensus 87 ~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~ 165 (347)
T 3hfq_A 87 PPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVY 165 (347)
T ss_dssp CCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEE
T ss_pred CCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEE
Confidence 467899999999888887 6799999999643333333332221 2367899999999 777767788999
Q ss_pred EEeccC-CCCc---------------cccc-cC-ceEEEecCCCcEEEEEccCC-Cc--ceeeecCCC------cceEEE
Q psy8758 72 SYDIRQ-LNSP---------------LNVH-KD-MTSAAANEDFNLYSYDIRQL-NS--PLNVHKDMT------SAVTSV 124 (198)
Q Consensus 72 ~~d~~~-~~~~---------------~~~~-~~-~~~~~~~~~~~i~~~d~~~~-~~--~~~~~~~~~------~~i~~~ 124 (198)
+|++.. .... +... .+ .++++...++.+.+|++... ++ .+..+.... ..+..+
T Consensus 166 ~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 245 (347)
T 3hfq_A 166 VYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAI 245 (347)
T ss_dssp EEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEE
T ss_pred EEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeE
Confidence 999872 2110 0111 12 24566678889999998741 22 122222222 348889
Q ss_pred EEccCCCEEE-EeecCCcEEEEEcCCC---ceeeEEeccCcccEEEEEEcCCCCEEEEecC-CCeEEEE--ecCCCcc
Q psy8758 125 DYSPTGREFV-AGGYDKSLRLYLAHQG---HSRDIYHTKRMQHVTHTVWSLDNKFVISASD-EMNLRVW--KAHASEK 195 (198)
Q Consensus 125 ~~sp~~~~l~-~~~~d~~v~v~d~~~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-dg~v~~w--~~~~~~~ 195 (198)
+|+|||++|+ +...++.|.+|++... +.+..+ ..+...+..++|+|||++|++++. ++.|.+| |.++|+.
T Consensus 246 ~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 246 RLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQI-STEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp EECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEE-ECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEE-ecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 9999999774 5556899999999732 223333 334456889999999998887765 5899999 5556664
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=3.1e-20 Score=132.85 Aligned_cols=189 Identities=9% Similarity=0.107 Sum_probs=130.4
Q ss_pred cceeEEEECCCCceEEEeeCC-CeEEEEEcc--CCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc--
Q psy8758 2 QHVTHTVWSLDNKFVISASDE-MNLRVWKAH--ASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR-- 76 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d-~~i~i~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~-- 76 (198)
+.+.+++|+|+|+++++++.+ +.|.+|++. +++ ...+........+..++|+|+++.+++++..++.|.+||+.
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~ 116 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA-LTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG 116 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC-EEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc-eeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCC
Confidence 357789999999988888876 999999997 444 23333333344788999999999998877678999999993
Q ss_pred -CCCC-----------ccccc-cC-ceEEEecCCCcEEEEEccCCCccee----eecC-CCcceEEEEEccCCCEEEEee
Q psy8758 77 -QLNS-----------PLNVH-KD-MTSAAANEDFNLYSYDIRQLNSPLN----VHKD-MTSAVTSVDYSPTGREFVAGG 137 (198)
Q Consensus 77 -~~~~-----------~~~~~-~~-~~~~~~~~~~~i~~~d~~~~~~~~~----~~~~-~~~~i~~~~~sp~~~~l~~~~ 137 (198)
.... .+... .+ .++++...++.|.+||+...++... .... ....+..++|+|+++++++++
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~ 196 (343)
T 1ri6_A 117 LPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVN 196 (343)
T ss_dssp EEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEE
T ss_pred ccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEe
Confidence 1110 01111 12 2344444899999999986333221 2222 334688999999999776554
Q ss_pred -cCCcEEEEEcCC--Ccee--eEEe---ccC--cccEEEEEEcCCCCEEE-EecCCCeEEEEecC
Q psy8758 138 -YDKSLRLYLAHQ--GHSR--DIYH---TKR--MQHVTHTVWSLDNKFVI-SASDEMNLRVWKAH 191 (198)
Q Consensus 138 -~d~~v~v~d~~~--~~~~--~~~~---~~~--~~~v~~~~~s~~~~~l~-~~~~dg~v~~w~~~ 191 (198)
.++.+.+|++.. ++.. .... .++ ...+..++|+|+|++|+ +...++.|.+|++.
T Consensus 197 ~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 197 ELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp TTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 789999999954 4332 2221 111 23577899999998776 45578999999998
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=7.3e-21 Score=144.41 Aligned_cols=191 Identities=8% Similarity=0.004 Sum_probs=145.7
Q ss_pred ceeEEEECC----CCceEEEee-CCCeEEEEEccCCceeeeeeeee--------e-cCceeeEEeCCCCCeEEEEecCCc
Q psy8758 3 HVTHTVWSL----DNKFVISAS-DEMNLRVWKAHASEKLGPIRKVV--------M-SLRSNMVSWNPMEAFVFTAANEDF 68 (198)
Q Consensus 3 ~v~~~~~s~----~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~--------~-~~~v~~~~~~~~~~~~~~~~~~d~ 68 (198)
.+..++|+| +|+++++++ .+++|.+||..+++.+..+.... | ...+..+.++|+++.++++...++
T Consensus 223 ~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g 302 (543)
T 1nir_A 223 EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG 302 (543)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCC
Confidence 467899999 999999988 48999999999888777665422 1 236789999999998888888899
Q ss_pred cEEEEeccCCCCcc---------------ccccCceEEEecCCCcEEEEEccCCCcceeeecC----CCcceEEEEEccC
Q psy8758 69 NLYSYDIRQLNSPL---------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD----MTSAVTSVDYSPT 129 (198)
Q Consensus 69 ~i~~~d~~~~~~~~---------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~----~~~~i~~~~~sp~ 129 (198)
.|.+||........ ......+++++..+++|.+||+.+ ++.+..+.. |......+ ++|+
T Consensus 303 ~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t-g~l~~~i~~g~~ph~g~g~~~-~~p~ 380 (543)
T 1nir_A 303 KVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD-RRLSALVDVGKTPHPGRGANF-VHPK 380 (543)
T ss_dssp EEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSBCCTTCEEE-EETT
T ss_pred eEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCC-CeEEEeeccCCCCCCCCCccc-CCCC
Confidence 99999987643211 111123456667789999999998 677776653 44333333 4777
Q ss_pred -CCEEEEee-cCCcEEEEEcCC-------CceeeEEeccCcccEEEEEEcCCCCEEEEec-------CCCeEEEEecCCC
Q psy8758 130 -GREFVAGG-YDKSLRLYLAHQ-------GHSRDIYHTKRMQHVTHTVWSLDNKFVISAS-------DEMNLRVWKAHAS 193 (198)
Q Consensus 130 -~~~l~~~~-~d~~v~v~d~~~-------~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------~dg~v~~w~~~~~ 193 (198)
++.++++. .|++|.+||+.+ .+.+..+ ..|...+..++++|+|++|++++ .+++|.+||++++
T Consensus 381 ~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l-~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~ 459 (543)
T 1nir_A 381 YGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAEL-QGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNL 459 (543)
T ss_dssp TEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE-ECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred CccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEE-EcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCC
Confidence 66677765 589999999998 7777777 56767888999999999999886 2679999999988
Q ss_pred ccc
Q psy8758 194 EKL 196 (198)
Q Consensus 194 ~~~ 196 (198)
+.+
T Consensus 460 ~~~ 462 (543)
T 1nir_A 460 DAK 462 (543)
T ss_dssp TSC
T ss_pred CCC
Confidence 764
No 139
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.89 E-value=3.1e-21 Score=147.67 Aligned_cols=183 Identities=8% Similarity=-0.052 Sum_probs=129.0
Q ss_pred ceeEEEECCCCceEEEeeC-CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecC---CccEEEE--ec-
Q psy8758 3 HVTHTVWSLDNKFVISASD-EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE---DFNLYSY--DI- 75 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~-d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---d~~i~~~--d~- 75 (198)
+|++++|+|||++||.++. ||+++||++.+++ ...+..+ +...+..+.|+|+ +.++++ +. +....+| +.
T Consensus 23 ~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~-~~~lt~~-~~~~~~~~~~spd-~~l~~~-~~~~g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 23 EKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE-TVKLNRE-PINSVLDPHYGVG-RVILVR-DVSKGAEQHALFKVNTS 98 (582)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTE-EEECCSS-CCSEECEECTTCS-EEEEEE-ECSTTSCCEEEEEEETT
T ss_pred chheeecCCCCCeEEEEEccCCceeEEEEcCCC-cEeeecc-cccccccccCCCC-eEEEEe-ccCCCCcceEEEEEecc
Confidence 6899999999999999886 9999999996554 3333322 2246889999999 555544 33 3444554 44
Q ss_pred -cCCCCcc-----------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC----
Q psy8758 76 -RQLNSPL-----------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD---- 139 (198)
Q Consensus 76 -~~~~~~~-----------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d---- 139 (198)
......+ ....+.++++...++.+.+||+.+ ++... +..+.. .+++|||||++|++++.+
T Consensus 99 ~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~-g~~~~-l~~~~~--~~~~~spDG~~la~~~~~~~~~ 174 (582)
T 3o4h_A 99 RPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDG-GGLRE-LARLPG--FGFVSDIRGDLIAGLGFFGGGR 174 (582)
T ss_dssp STTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEET-TEEEE-EEEESS--CEEEEEEETTEEEEEEEEETTE
T ss_pred CCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccC-CcEEE-eecCCC--ceEEECCCCCEEEEEEEcCCCC
Confidence 2221111 112223344444455556999987 44333 333333 789999999999988776
Q ss_pred CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC--eEEEEecCCCcc
Q psy8758 140 KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM--NLRVWKAHASEK 195 (198)
Q Consensus 140 ~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~v~~w~~~~~~~ 195 (198)
..|++||+.+++.... ..|...+..++|||||++|+++..++ .|++||+++++.
T Consensus 175 ~~i~~~d~~~g~~~~l--~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRVF--DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV 230 (582)
T ss_dssp EEEEEEETTTCCCEEE--CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE
T ss_pred eEEEEEcCCCCCceEe--ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE
Confidence 7899999998887643 56778899999999999999888888 899999998764
No 140
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.89 E-value=1.9e-20 Score=138.04 Aligned_cols=175 Identities=13% Similarity=0.074 Sum_probs=127.9
Q ss_pred CceEEEeeCC------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC---ccEEEEeccCCCCc-c
Q psy8758 13 NKFVISASDE------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED---FNLYSYDIRQLNSP-L 82 (198)
Q Consensus 13 ~~~l~~~~~d------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d---~~i~~~d~~~~~~~-~ 82 (198)
+..++.++.+ +.|++||+..+ ....+.. +...+.+++|+|+++.+++++ .+ ..|++||+.+.... +
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~--~~~~v~~~~~Spdg~~la~~s-~~~~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHR--SPQPLMSPAWSPDGSKLAYVT-FESGRSALVIQTLANGAVRQV 218 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSC-SCEEEEE--ESSCEEEEEECTTSSEEEEEE-CTTSSCEEEEEETTTCCEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCC-CCEEEeC--CCCcceeeEEcCCCCEEEEEE-ecCCCcEEEEEECCCCcEEEe
Confidence 5566666544 79999999743 3444443 467899999999999998865 44 48999999765421 1
Q ss_pred ccc-----------cCc-eEEEecCCC--cEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-CC--cEEEE
Q psy8758 83 NVH-----------KDM-TSAAANEDF--NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DK--SLRLY 145 (198)
Q Consensus 83 ~~~-----------~~~-~~~~~~~~~--~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~--~v~v~ 145 (198)
..+ .+. ++++++.++ .|++||+.+ ++ ...+..|...+.+++|+|||++|++++. ++ .|++|
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~-~~-~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~ 296 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS-GQ-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 296 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-CC-EEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC-CC-EEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence 111 122 343666555 499999986 33 4667778888999999999999988876 44 67788
Q ss_pred EcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC---CeEEEEecCCCcc
Q psy8758 146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE---MNLRVWKAHASEK 195 (198)
Q Consensus 146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---g~v~~w~~~~~~~ 195 (198)
|+.+++.... ..+...+..++|+|+|++|++++.+ ..|++||+.+++.
T Consensus 297 d~~~~~~~~l--~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 297 NINGGAPQRI--TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp ETTSSCCEEC--CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred ECCCCCEEEE--ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 9888765432 3455788999999999999887654 5899999998764
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=3.4e-20 Score=132.35 Aligned_cols=184 Identities=8% Similarity=0.050 Sum_probs=131.3
Q ss_pred EEEECCCCceEEEeeCCC---eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCcc-EEEEeccCCCCc
Q psy8758 6 HTVWSLDNKFVISASDEM---NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFN-LYSYDIRQLNSP 81 (198)
Q Consensus 6 ~~~~s~~~~~l~~~~~d~---~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~-i~~~d~~~~~~~ 81 (198)
+++|+|+|++++++..++ .|.+||+.+++....+. .......++|+|+++++++++..++. +.+|++......
T Consensus 88 ~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~---~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~ 164 (331)
T 3u4y_A 88 DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP---IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVL 164 (331)
T ss_dssp CEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE---CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCE
T ss_pred ceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE---CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcE
Confidence 499999999998655553 89999998887655443 34556899999999988887767788 999997642211
Q ss_pred ----------------cccc-cC-ceEEEecCCCcEEEEEccCCCcc---eeeecCCCcceEEEEEccCCCEEEEee-cC
Q psy8758 82 ----------------LNVH-KD-MTSAAANEDFNLYSYDIRQLNSP---LNVHKDMTSAVTSVDYSPTGREFVAGG-YD 139 (198)
Q Consensus 82 ----------------~~~~-~~-~~~~~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~i~~~~~sp~~~~l~~~~-~d 139 (198)
+... .+ .+++++..++.|.+||+.+ ++. +..+.. ...+..++|+|+|+++++++ .+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~-~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~ 242 (331)
T 3u4y_A 165 FDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN-PENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTEST 242 (331)
T ss_dssp EEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS-TTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSE
T ss_pred eecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC-CcccceeeeccC-CCCCceEEECCCCCEEEEEEcCC
Confidence 0111 12 3566677889999999987 555 555553 35678899999999776554 57
Q ss_pred CcEEEEEcCCCce--eeEEecc---Cc---ccEEEEEEcCCCCEEEEe-cCCCeEEEEecCCCc
Q psy8758 140 KSLRLYLAHQGHS--RDIYHTK---RM---QHVTHTVWSLDNKFVISA-SDEMNLRVWKAHASE 194 (198)
Q Consensus 140 ~~v~v~d~~~~~~--~~~~~~~---~~---~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~~ 194 (198)
+.|.+||+.+++. +..+... +. .....++|+|||++|+++ ..++.|.+||+.+..
T Consensus 243 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 243 VDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp EEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred CEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 8899999999877 3222111 11 123568999999987654 556799999998654
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.88 E-value=2e-21 Score=151.98 Aligned_cols=188 Identities=15% Similarity=0.149 Sum_probs=134.5
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecC---ceeeEEeCCCCCeEEEEecC--------CccEE
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSL---RSNMVSWNPMEAFVFTAANE--------DFNLY 71 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~--------d~~i~ 71 (198)
.+.+++|+|||+++++ +.||.|++||+.+++....+.. +.. .+.+++|+||+++++++... ++.++
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~--~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEG--KKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECT--TTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEecc--ccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 3678899999998776 6899999999998876544432 222 48899999999999886532 37899
Q ss_pred EEeccCCCC-ccc-------------cc-cCceEEEecCCCcEEEEEccCCCcceeeecCCCcc----------------
Q psy8758 72 SYDIRQLNS-PLN-------------VH-KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSA---------------- 120 (198)
Q Consensus 72 ~~d~~~~~~-~~~-------------~~-~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~---------------- 120 (198)
+||+.+... .+. .. .+..++.++. +.|++||+.+ ++.......+...
T Consensus 95 ~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~-g~~~~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 95 LSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVG-KQAIRVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp EEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSS-SCCEEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred EEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCC-CceEEEecCCCCCceECcccceeEEEEec
Confidence 999876542 111 11 2234555554 7899999987 4555444433332
Q ss_pred --eEEEEEccCCCEEEEeecCC----------------------------------cEEEEEcCCCceeeEEecc-----
Q psy8758 121 --VTSVDYSPTGREFVAGGYDK----------------------------------SLRLYLAHQGHSRDIYHTK----- 159 (198)
Q Consensus 121 --i~~~~~sp~~~~l~~~~~d~----------------------------------~v~v~d~~~~~~~~~~~~~----- 159 (198)
+.+++|||||+.|++++.|+ .|++||+.+++....+...
T Consensus 173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence 37899999999999887543 7999999988754443221
Q ss_pred CcccEEEEEEcCCCCEEEEec----CCCeEEEEecCCCcc
Q psy8758 160 RMQHVTHTVWSLDNKFVISAS----DEMNLRVWKAHASEK 195 (198)
Q Consensus 160 ~~~~v~~~~~s~~~~~l~~~~----~dg~v~~w~~~~~~~ 195 (198)
+...+..++|||||++|++.+ .+..|++||+.+++.
T Consensus 253 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~ 292 (723)
T 1xfd_A 253 REYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVC 292 (723)
T ss_dssp SSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCE
T ss_pred ccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 256789999999999887654 236799999998874
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.88 E-value=5.9e-20 Score=132.03 Aligned_cols=190 Identities=8% Similarity=0.022 Sum_probs=140.1
Q ss_pred ceeEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeec-------CceeeEEeCCCCCeEEEEe-cCCccEEEE
Q psy8758 3 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMS-------LRSNMVSWNPMEAFVFTAA-NEDFNLYSY 73 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~~~~-~~d~~i~~~ 73 (198)
.+..++|+|+|++++++ ..++.|.+||..+++....+...... ..+..++|+|+++.+++++ ..++.|.+|
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~ 169 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVV 169 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEE
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEE
Confidence 35788999999966554 55799999999988765555432111 1257899999999888876 357889999
Q ss_pred eccCCCCcc--c----------c-ccCceEEEecCCCcEEEEEccCCCcceeeecC----CCcceEEEEEccCCCEEEEe
Q psy8758 74 DIRQLNSPL--N----------V-HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD----MTSAVTSVDYSPTGREFVAG 136 (198)
Q Consensus 74 d~~~~~~~~--~----------~-~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~----~~~~i~~~~~sp~~~~l~~~ 136 (198)
|..+..... . . ..+..++++..++.+.+||+.+ .+....+.. +...+..++|+|++++++++
T Consensus 170 d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 248 (353)
T 3vgz_A 170 DGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTAD-NKILSRKKLLDDGKEHFFINISLDTARQRAFIT 248 (353)
T ss_dssp ETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEE
T ss_pred cCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCCCEEEEE
Confidence 987543211 1 1 1234577777899999999987 566655543 45567889999999977766
Q ss_pred ec-CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEE-ecCCCeEEEEecCCCccc
Q psy8758 137 GY-DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVIS-ASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 137 ~~-d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~-~~~dg~v~~w~~~~~~~~ 196 (198)
+. ++.|.+||..+++....+..+. ...++|+|+|++++. ...++.|.+||+.+++.+
T Consensus 249 ~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~ 307 (353)
T 3vgz_A 249 DSKAAEVLVVDTRNGNILAKVAAPE---SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVV 307 (353)
T ss_dssp ESSSSEEEEEETTTCCEEEEEECSS---CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred eCCCCEEEEEECCCCcEEEEEEcCC---CceEEECCCCCEEEEEECCCCeEEEEECCCCeEE
Confidence 55 5899999999998877764432 256899999996554 457899999999988765
No 144
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=5.3e-20 Score=131.37 Aligned_cols=187 Identities=13% Similarity=0.074 Sum_probs=131.7
Q ss_pred ceeEEEECCCCceEEEeeC-CCeEEEEEccCCce-eeeeeeeeecCceeeEEeCCCCCeEEEEecCC-c--cEEEEeccC
Q psy8758 3 HVTHTVWSLDNKFVISASD-EMNLRVWKAHASEK-LGPIRKVVMSLRSNMVSWNPMEAFVFTAANED-F--NLYSYDIRQ 77 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~-d~~i~i~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-~--~i~~~d~~~ 77 (198)
.+ .++|+|+|+++++++. ++.|.+||+.+++. ...+.. +..+..+++|+|+++++++ +..+ + .|.+||+.+
T Consensus 42 ~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~-~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 42 FV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE--GQSSMADVDITPDDQFAVT-VTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp EE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE--CSSCCCCEEECTTSSEEEE-CCCSSSSCEEEEEETTT
T ss_pred cc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc--CCCCccceEECCCCCEEEE-ecCCCCcccEEEEECCC
Confidence 45 8999999997776665 88999999988875 333322 2333333999999999984 4444 3 899999875
Q ss_pred CCCc--c-----------ccccCceEEEecCCCc-EEEEEccCCCcce---eeecCCCcceEEEEEccCCCEEEE-eecC
Q psy8758 78 LNSP--L-----------NVHKDMTSAAANEDFN-LYSYDIRQLNSPL---NVHKDMTSAVTSVDYSPTGREFVA-GGYD 139 (198)
Q Consensus 78 ~~~~--~-----------~~~~~~~~~~~~~~~~-i~~~d~~~~~~~~---~~~~~~~~~i~~~~~sp~~~~l~~-~~~d 139 (198)
.... + ......++++...++. +.+|++...+... .........+..++|+|+|+++++ +..+
T Consensus 118 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 197 (331)
T 3u4y_A 118 NKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG 197 (331)
T ss_dssp TEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT
T ss_pred CCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC
Confidence 4321 1 1111235666667688 9999987533221 111233455789999999996655 4568
Q ss_pred CcEEEEEcCCCce---eeEEeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCCCcc
Q psy8758 140 KSLRLYLAHQGHS---RDIYHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEK 195 (198)
Q Consensus 140 ~~v~v~d~~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~~~ 195 (198)
+.|++||+.+++. +..+. ....+..++|+|||++++.+ ..++.|.+||+.+++.
T Consensus 198 ~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 198 NSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp TEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred CeEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 9999999999887 55553 23677889999999976654 4578899999998876
No 145
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=9.2e-20 Score=130.76 Aligned_cols=187 Identities=10% Similarity=0.002 Sum_probs=132.3
Q ss_pred ceeEEEECCCCceEE-EeeCCCeEEEEEccCCceeeeeeeeee----cCceeeEEeCCCCCeEEEEecC-----------
Q psy8758 3 HVTHTVWSLDNKFVI-SASDEMNLRVWKAHASEKLGPIRKVVM----SLRSNMVSWNPMEAFVFTAANE----------- 66 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~----------- 66 (198)
.+..++|+|+|++++ +...++.|.+||+.+++....+..... ...+..++|+|++++++++...
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 467899999998665 445689999999988875544432110 2236789999999999887533
Q ss_pred CccEEEEeccCCC---C--ccc---------cccCceEEEecCCCcEEEEEccCCCcceeeecCCC--------------
Q psy8758 67 DFNLYSYDIRQLN---S--PLN---------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT-------------- 118 (198)
Q Consensus 67 d~~i~~~d~~~~~---~--~~~---------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-------------- 118 (198)
++.|.+||+.+.. . ... ..++..+++++ +.|.+||+.+ ++....+..+.
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~~~~--~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAG--PDIYKMDVKT-GKYTVALPLRNWNRKGYSAPDVLYF 200 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEEEES--SSEEEECTTT-CCEEEEECSTTCCCTTBCCCBCCCC
T ss_pred CCeEEEEECCCccccceeeeccCCCcccceeECCCCcEEEcc--CcEEEEeCCC-CceeccccccccCCccccCccceee
Confidence 4899999987521 1 011 11111133333 3489999876 44444433221
Q ss_pred ------------------------------------------------------cceEEEEEcc-CCCEEEEeecCCcEE
Q psy8758 119 ------------------------------------------------------SAVTSVDYSP-TGREFVAGGYDKSLR 143 (198)
Q Consensus 119 ------------------------------------------------------~~i~~~~~sp-~~~~l~~~~~d~~v~ 143 (198)
..+..++|+| ++++++++ ++.|.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~ 278 (349)
T 1jmx_B 201 WPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLA 278 (349)
T ss_dssp CCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEE
T ss_pred ecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEE
Confidence 1345678889 99998888 88999
Q ss_pred EEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 144 LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 144 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+||+.+++....+..+ ..+.+++|+|+|++|++++.++.|++||+++++.+
T Consensus 279 ~~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 279 KYDLKQRKLIKAANLD--HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKV 329 (349)
T ss_dssp EEETTTTEEEEEEECS--SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEE
T ss_pred EEECccCeEEEEEcCC--CCccceEECCCCCEEEEecCCCeEEEEecccccee
Confidence 9999999887776433 45778999999998888888899999999998865
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=1.9e-20 Score=131.08 Aligned_cols=178 Identities=13% Similarity=0.061 Sum_probs=127.1
Q ss_pred cceeEEEECCCCceEEEee--CCCeEEEEEc--cCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSLDNKFVISAS--DEMNLRVWKA--HASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~--~d~~i~i~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~ 77 (198)
..+.+++|+|+|+++++++ .++...||.+ .+++ ...+. ....+..++|+|+++.++.++..++.+.+|++..
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~---~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~ 160 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMT---KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDI 160 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECC---SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEee---cCCCccceEECCCCCEEEEEECCCCceEEEEEEC
Confidence 3578899999999999988 3345555555 4433 22222 2345788999999999987777889888888642
Q ss_pred C--C-Cccc----------cc-cCc-eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC---
Q psy8758 78 L--N-SPLN----------VH-KDM-TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD--- 139 (198)
Q Consensus 78 ~--~-~~~~----------~~-~~~-~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d--- 139 (198)
. . ..+. .. .+. +++++..++.+.+|++.........+..+...+..++|+|+|++|++++.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 240 (297)
T 2ojh_A 161 DSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADV 240 (297)
T ss_dssp TTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTC
T ss_pred CCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCC
Confidence 2 1 1111 11 122 344455688999999874356677777788889999999999999888765
Q ss_pred --------CcEEEEEcCCCceeeEE-eccCcccEEEEEEcCCCCEEEEecCCC
Q psy8758 140 --------KSLRLYLAHQGHSRDIY-HTKRMQHVTHTVWSLDNKFVISASDEM 183 (198)
Q Consensus 140 --------~~v~v~d~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg 183 (198)
+.|++||+.+++..... ..+|...+..++|+|++++|++++.+.
T Consensus 241 ~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 241 FDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 56999999988764443 236677899999999999988776543
No 147
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.86 E-value=1.8e-18 Score=125.05 Aligned_cols=187 Identities=13% Similarity=0.098 Sum_probs=129.1
Q ss_pred ceeEEEECCCCceEEEeeCC----CeEEEEEccCC-ceeeeeeeee-ecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758 3 HVTHTVWSLDNKFVISASDE----MNLRVWKAHAS-EKLGPIRKVV-MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR 76 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d----~~i~i~~~~~~-~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~ 76 (198)
.+..++|+|+|++|++++.+ +.+.+|++... .....+.... +......+++ +++.++++...++.+.+|++.
T Consensus 51 ~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~ 128 (361)
T 3scy_A 51 NPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIG 128 (361)
T ss_dssp CCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBC
T ss_pred CCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeC
Confidence 45678999999999998875 79999998753 2333343332 3445667777 788888877678999999986
Q ss_pred CCCCc--------------------------cccc-cC-ceEEEecCCCcEEEEEccCCCc----c-e-------eeecC
Q psy8758 77 QLNSP--------------------------LNVH-KD-MTSAAANEDFNLYSYDIRQLNS----P-L-------NVHKD 116 (198)
Q Consensus 77 ~~~~~--------------------------~~~~-~~-~~~~~~~~~~~i~~~d~~~~~~----~-~-------~~~~~ 116 (198)
..... +... .+ .++++...++.+.+|++..... . + .....
T Consensus 129 ~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~ 208 (361)
T 3scy_A 129 QDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA 208 (361)
T ss_dssp TTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC
T ss_pred CCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecC
Confidence 42211 1111 12 2455666788999999875332 1 1 11223
Q ss_pred CCcceEEEEEccCCCEEEEee-cCCcEEEEEcCCCceeeE--Ee--ccCcccEEEEEEcCCCCEEEEecC--CCeEEEEe
Q psy8758 117 MTSAVTSVDYSPTGREFVAGG-YDKSLRLYLAHQGHSRDI--YH--TKRMQHVTHTVWSLDNKFVISASD--EMNLRVWK 189 (198)
Q Consensus 117 ~~~~i~~~~~sp~~~~l~~~~-~d~~v~v~d~~~~~~~~~--~~--~~~~~~v~~~~~s~~~~~l~~~~~--dg~v~~w~ 189 (198)
....+..++|+|+|+++++++ .++.|.+|++.+++.... .. ..+......++|+|||++|+++.. ++.|.+|+
T Consensus 209 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 209 PGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 445678999999999887776 689999999997755322 21 223345789999999998876654 58999999
Q ss_pred cC
Q psy8758 190 AH 191 (198)
Q Consensus 190 ~~ 191 (198)
++
T Consensus 289 ~~ 290 (361)
T 3scy_A 289 VD 290 (361)
T ss_dssp EC
T ss_pred Ec
Confidence 95
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=7.5e-19 Score=126.34 Aligned_cols=187 Identities=14% Similarity=0.138 Sum_probs=127.7
Q ss_pred ceeEEEECCCCceEEEeeC---CCeEEEEEccCCceeeeeee-eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758 3 HVTHTVWSLDNKFVISASD---EMNLRVWKAHASEKLGPIRK-VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL 78 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~---d~~i~i~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~ 78 (198)
.+..++|+|+|+ +++++. ++.|++|++.+++. ..+.. ..+...+..++|+|+++.+++++..++.+.+|++...
T Consensus 41 ~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~-~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~ 118 (347)
T 3hfq_A 41 NPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA-HKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAAD 118 (347)
T ss_dssp CCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE-EEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTT
T ss_pred CcceEEEccCCe-EEEEEecCCCceEEEEEecCCcE-EEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCC
Confidence 456799999999 555544 68999999976653 23332 2245678899999999999887667899999998521
Q ss_pred CC-----c-------------------ccc-ccCceEEEecCCCcEEEEEccCCCccee--eecC-CCcceEEEEEccCC
Q psy8758 79 NS-----P-------------------LNV-HKDMTSAAANEDFNLYSYDIRQLNSPLN--VHKD-MTSAVTSVDYSPTG 130 (198)
Q Consensus 79 ~~-----~-------------------~~~-~~~~~~~~~~~~~~i~~~d~~~~~~~~~--~~~~-~~~~i~~~~~sp~~ 130 (198)
.. . +.. ..+.++++...++.|.+|++...+.... .+.. ....+..++|+|||
T Consensus 119 g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg 198 (347)
T 3hfq_A 119 GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDG 198 (347)
T ss_dssp SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTS
T ss_pred CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCC
Confidence 10 0 111 1223566677788999999984233221 1222 23357889999999
Q ss_pred CEEEE-eecCCcEEEEEcCC--Cceee--EEeccC-----cccEEEEEEcCCCCEEE-EecCCCeEEEEecC
Q psy8758 131 REFVA-GGYDKSLRLYLAHQ--GHSRD--IYHTKR-----MQHVTHTVWSLDNKFVI-SASDEMNLRVWKAH 191 (198)
Q Consensus 131 ~~l~~-~~~d~~v~v~d~~~--~~~~~--~~~~~~-----~~~v~~~~~s~~~~~l~-~~~~dg~v~~w~~~ 191 (198)
+++++ ...++.+.+|++.. ++... ...... ...+..++|+|||++|+ +...++.|.+|++.
T Consensus 199 ~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 199 QYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp SEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 96665 55688999999884 44322 221111 14588999999999774 55668999999986
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=4.1e-20 Score=149.88 Aligned_cols=185 Identities=9% Similarity=0.065 Sum_probs=140.1
Q ss_pred eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee---------eecCceeeEEeC-CCCCeEEEEecCCccEEEE
Q psy8758 4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV---------VMSLRSNMVSWN-PMEAFVFTAANEDFNLYSY 73 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~---------~~~~~v~~~~~~-~~~~~~~~~~~~d~~i~~~ 73 (198)
+...+|+|+|++++.+ .++.|.+|++...+ +..+... .+...+..++|+ |+++.++++. ++.+++|
T Consensus 247 ~~~~~~SpDG~~la~~-~~~~i~~~d~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~~~i~~~ 322 (1045)
T 1k32_A 247 YYPRHLNTDGRRILFS-KGGSIYIFNPDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--RGQAFIQ 322 (1045)
T ss_dssp SCEEEEEESSSCEEEE-ETTEEEEECTTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--TTEEEEE
T ss_pred cceeeEcCCCCEEEEE-eCCEEEEecCCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEE--cCEEEEE
Confidence 4577999999999887 48899999984333 2222221 123468899999 9999988764 7899999
Q ss_pred eccCCCC-ccccc-----------cCceEEEecCCCcEE-EEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC
Q psy8758 74 DIRQLNS-PLNVH-----------KDMTSAAANEDFNLY-SYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK 140 (198)
Q Consensus 74 d~~~~~~-~~~~~-----------~~~~~~~~~~~~~i~-~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~ 140 (198)
+...... .+..+ .+..++.++.+..++ +||+.. +. ...+..+...+..++|+|||++|++++.++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~-~~-~~~l~~~~~~~~~~~~SpDG~~la~~~~~~ 400 (1045)
T 1k32_A 323 DVSGTYVLKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRT-GK-AEKFEENLGNVFAMGVDRNGKFAVVANDRF 400 (1045)
T ss_dssp CTTSSBEEECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTT-CC-EEECCCCCCSEEEEEECTTSSEEEEEETTS
T ss_pred cCCCCceEEccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCC-CC-ceEecCCccceeeeEECCCCCEEEEECCCC
Confidence 9865431 11112 223456666677888 889876 33 344447778899999999999999999999
Q ss_pred cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC----------eEEEEecCCCcc
Q psy8758 141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM----------NLRVWKAHASEK 195 (198)
Q Consensus 141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg----------~v~~w~~~~~~~ 195 (198)
.|++||+.+++..... .+|...+.+++|||||++|++++.++ .|++||+.+++.
T Consensus 401 ~v~~~d~~tg~~~~~~-~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~ 464 (1045)
T 1k32_A 401 EIMTVDLETGKPTVIE-RSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 464 (1045)
T ss_dssp EEEEEETTTCCEEEEE-ECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred eEEEEECCCCceEEec-cCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence 9999999999877665 46778899999999999998876544 899999988763
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=2.6e-19 Score=139.83 Aligned_cols=187 Identities=13% Similarity=0.122 Sum_probs=134.7
Q ss_pred eeEEEECCCCceEEEee---------------------------------CCCeEEEEEccCCceeeeeeeeeecCceee
Q psy8758 4 VTHTVWSLDNKFVISAS---------------------------------DEMNLRVWKAHASEKLGPIRKVVMSLRSNM 50 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~---------------------------------~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~ 50 (198)
+.+++|||||++|++++ .+..|++||+.+++.........+...+..
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTN 262 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEee
Confidence 58999999999999887 446799999987764332222124456889
Q ss_pred EEeCCCCCeEEEEecCC-----ccEEEEeccCC-CC----------------ccccc---cCceEEEecCCCcEEEEEcc
Q psy8758 51 VSWNPMEAFVFTAANED-----FNLYSYDIRQL-NS----------------PLNVH---KDMTSAAANEDFNLYSYDIR 105 (198)
Q Consensus 51 ~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~-~~----------------~~~~~---~~~~~~~~~~~~~i~~~d~~ 105 (198)
++|+|+++.++++. .+ ..|++||+.+. .. .+... .+.+++++..++.+++|++.
T Consensus 263 ~~~spdg~~l~~~~-~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 263 LSWSPDENILYVAE-VNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp EEECTTSSEEEEEE-ECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred EEEECCCCEEEEEE-eCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEE
Confidence 99999999888754 33 38999998765 10 01112 34567778888888999887
Q ss_pred CCCcceeeecCCCcceEE-EEEccCCCEEEEeec-CC----cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe
Q psy8758 106 QLNSPLNVHKDMTSAVTS-VDYSPTGREFVAGGY-DK----SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA 179 (198)
Q Consensus 106 ~~~~~~~~~~~~~~~i~~-~~~sp~~~~l~~~~~-d~----~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 179 (198)
..+..+..+..+...+.. ++|+|+++.|+.++. ++ .|..||+.+++... + .+...+.+++|+|||++++..
T Consensus 342 ~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~-l--~~~~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 342 TTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKD-L--TPESGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp TTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEE-S--CCSSSEEEEEECTTSSEEEEE
T ss_pred CCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCcee-c--cCCCceEEEEECCCCCEEEEE
Confidence 435667777777777876 799999998766554 44 66777777765322 2 355678999999999988765
Q ss_pred cCC----CeEEEEecCCCc
Q psy8758 180 SDE----MNLRVWKAHASE 194 (198)
Q Consensus 180 ~~d----g~v~~w~~~~~~ 194 (198)
+.+ +.+++||+.+++
T Consensus 419 ~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 419 FQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EECSSCSCEEEEEESSSCE
T ss_pred ecCCCCCcEEEEEECCCCe
Confidence 433 569999998875
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=1e-19 Score=142.37 Aligned_cols=188 Identities=12% Similarity=0.031 Sum_probs=129.7
Q ss_pred ceeEEEECCCCceEEEeeCC---------CeEEEEEccCCceeeeeeeee-ecCceeeEEeCCCCCeEEEEecCCccEEE
Q psy8758 3 HVTHTVWSLDNKFVISASDE---------MNLRVWKAHASEKLGPIRKVV-MSLRSNMVSWNPMEAFVFTAANEDFNLYS 72 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d---------~~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~ 72 (198)
.|.+++|||||++|++++.+ +.+.+||+.+++. ..+.... +...+..++|+|||+.++++. ++.|++
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~--~~~i~~ 138 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIF--ENNIYY 138 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEE--TTEEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEE--CCeEEE
Confidence 38899999999999998764 7888999988764 3333221 333478899999999998864 379999
Q ss_pred EeccCCCCcc--c----------------------------c-ccCceEEEecCC-------------------------
Q psy8758 73 YDIRQLNSPL--N----------------------------V-HKDMTSAAANED------------------------- 96 (198)
Q Consensus 73 ~d~~~~~~~~--~----------------------------~-~~~~~~~~~~~~------------------------- 96 (198)
||+.+..... . . ..+..++.++.+
T Consensus 139 ~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (723)
T 1xfd_A 139 CAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHY 218 (723)
T ss_dssp ESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEEC
T ss_pred EECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccC
Confidence 9987543210 0 1 112334444432
Q ss_pred ---------CcEEEEEccCCCcceeeecCC------CcceEEEEEccCCCEEEEeec----CCcEEEEEcCCCceeeEEe
Q psy8758 97 ---------FNLYSYDIRQLNSPLNVHKDM------TSAVTSVDYSPTGREFVAGGY----DKSLRLYLAHQGHSRDIYH 157 (198)
Q Consensus 97 ---------~~i~~~d~~~~~~~~~~~~~~------~~~i~~~~~sp~~~~l~~~~~----d~~v~v~d~~~~~~~~~~~ 157 (198)
..|++||+.+ ++....+..+ ...+..++|||||+++++... +..|++||+.+++......
T Consensus 219 ~~~G~~~~~~~l~~~d~~~-~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~ 297 (723)
T 1xfd_A 219 PKAGSENPSISLHVIGLNG-PTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHE 297 (723)
T ss_dssp CBTTSCCCEEEEEEEESSS-SCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEE
T ss_pred CCCCCCCCeeEEEEEECCC-CceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEE
Confidence 2789999987 4444455443 567899999999998876643 3579999999998776653
Q ss_pred ccCcccEE----EEEEcCCCCEEEE--ecCCC------eEEEEe-cCCCc
Q psy8758 158 TKRMQHVT----HTVWSLDNKFVIS--ASDEM------NLRVWK-AHASE 194 (198)
Q Consensus 158 ~~~~~~v~----~~~~s~~~~~l~~--~~~dg------~v~~w~-~~~~~ 194 (198)
..+...+. .++|+|||+.|+. +..++ .|++|| ..+++
T Consensus 298 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~ 347 (723)
T 1xfd_A 298 DESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSS 347 (723)
T ss_dssp EECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSS
T ss_pred eccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCC
Confidence 33434443 7899999997764 44666 577777 34443
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.84 E-value=8.8e-18 Score=121.43 Aligned_cols=189 Identities=10% Similarity=0.125 Sum_probs=123.7
Q ss_pred eeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeee-ee-----------cCceeeEEeCCCCCeEEEEecCCccE
Q psy8758 4 VTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKV-VM-----------SLRSNMVSWNPMEAFVFTAANEDFNL 70 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~-~~-----------~~~v~~~~~~~~~~~~~~~~~~d~~i 70 (198)
...+++ +++++++++ .++.+.+|++.....+..+... .+ ...+.+++|+|+++++++++..++.+
T Consensus 102 p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v 179 (361)
T 3scy_A 102 PCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQI 179 (361)
T ss_dssp EEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEE
T ss_pred cEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEE
Confidence 345566 788777766 5789999999754433222111 11 12246799999999988877678999
Q ss_pred EEEeccCCCC----c-c--------------------ccc-cCc-eEEEecCCCcEEEEEccCCCcc--eeee---cCCC
Q psy8758 71 YSYDIRQLNS----P-L--------------------NVH-KDM-TSAAANEDFNLYSYDIRQLNSP--LNVH---KDMT 118 (198)
Q Consensus 71 ~~~d~~~~~~----~-~--------------------~~~-~~~-~~~~~~~~~~i~~~d~~~~~~~--~~~~---~~~~ 118 (198)
.+|++..... . + ..+ .+. ++++...++.|.+|++.+ +.. +..+ ..+.
T Consensus 180 ~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~ 258 (361)
T 3scy_A 180 HKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD-GMLDEIQTVAADTVNA 258 (361)
T ss_dssp EEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET-TEEEEEEEEESCSSCC
T ss_pred EEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC-CceEEeEEEecCCCCC
Confidence 9998864331 0 0 011 122 344455789999999985 332 2222 2233
Q ss_pred cceEEEEEccCCCEEEEeec--CCcEEEEEcC--CCceeeEEeccCcccEEEEEEcCCCCEEEEec-CCCeEEEEec--C
Q psy8758 119 SAVTSVDYSPTGREFVAGGY--DKSLRLYLAH--QGHSRDIYHTKRMQHVTHTVWSLDNKFVISAS-DEMNLRVWKA--H 191 (198)
Q Consensus 119 ~~i~~~~~sp~~~~l~~~~~--d~~v~v~d~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~--~ 191 (198)
.....++|+|||++|+++.. ++.|.+|++. +++............+..++|+|||++|++++ .++.|.+|++ .
T Consensus 259 ~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~ 338 (361)
T 3scy_A 259 QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACRDTNVIQIFERDQA 338 (361)
T ss_dssp CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEETTTTEEEEEEECTT
T ss_pred CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEECCCCCEEEEEEECC
Confidence 45689999999998877665 4899999996 44432222111145788999999999888776 6789999654 4
Q ss_pred CCcc
Q psy8758 192 ASEK 195 (198)
Q Consensus 192 ~~~~ 195 (198)
+++.
T Consensus 339 ~g~~ 342 (361)
T 3scy_A 339 TGLL 342 (361)
T ss_dssp TCCE
T ss_pred CCcE
Confidence 6654
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.84 E-value=2.7e-18 Score=122.49 Aligned_cols=174 Identities=11% Similarity=0.078 Sum_probs=128.0
Q ss_pred ceEEEeeCCCeEEEEEccCCceeeeeeeeeecC---ceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--ccc----
Q psy8758 14 KFVISASDEMNLRVWKAHASEKLGPIRKVVMSL---RSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LNV---- 84 (198)
Q Consensus 14 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~~---- 84 (198)
+++++++.++.|.+||+.+++....+.. .. .+..++|+|+++.+++++..++.|.+||+.+.... +..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 78 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITI---ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE 78 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEEC---TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEc---CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc
Confidence 5788999999999999988876554432 33 47899999999998887778899999998764421 111
Q ss_pred -----------c-cCceEEEec------------CCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC
Q psy8758 85 -----------H-KDMTSAAAN------------EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK 140 (198)
Q Consensus 85 -----------~-~~~~~~~~~------------~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~ 140 (198)
. .+..++++. .++.|.+||+.+ .+.+..+.. ...+..++|+|++++|+++ ++
T Consensus 79 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~ 154 (337)
T 1pby_B 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET-LSRRKAFEA-PRQITMLAWARDGSKLYGL--GR 154 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT-TEEEEEEEC-CSSCCCEEECTTSSCEEEE--SS
T ss_pred cccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCC-CcEEEEEeC-CCCcceeEECCCCCEEEEe--CC
Confidence 1 122455553 579999999987 555555553 4457889999999988887 68
Q ss_pred cEEEEEcCCCceeeEEecc-------------------------------------------------------------
Q psy8758 141 SLRLYLAHQGHSRDIYHTK------------------------------------------------------------- 159 (198)
Q Consensus 141 ~v~v~d~~~~~~~~~~~~~------------------------------------------------------------- 159 (198)
.|.+||+.+++....+..+
T Consensus 155 ~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 155 DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred eEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 8999999887665433111
Q ss_pred ----CcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 160 ----RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 160 ----~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+...+.+++|+|+|++++++ ++.|++||+.+++.+
T Consensus 235 ~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~ 273 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASI 273 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEE
T ss_pred ecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCc
Confidence 11234568999999998887 799999999988754
No 154
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.84 E-value=2.4e-19 Score=140.65 Aligned_cols=182 Identities=12% Similarity=0.050 Sum_probs=130.4
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCc--eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASE--KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS 80 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~ 80 (198)
.|.+++|||||++|++++. +.|++||+.++. ....+.. +...+..++|+||++.++++. ++.|++||+.+...
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~--~~~~~~~~~~SPDG~~la~~~--~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTH--GEGFATDAKLSPKGGFVSFIR--GRNLWVIDLASGRQ 184 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCC--SSSCEEEEEECTTSSEEEEEE--TTEEEEEETTTTEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEccc--CCcccccccCCCCCCEEEEEe--CCcEEEEecCCCCE
Confidence 3789999999999999886 899999998772 2333332 356789999999999998764 56899999875321
Q ss_pred c----------------------------cccc-cCceEEEecCCC---------------------------------c
Q psy8758 81 P----------------------------LNVH-KDMTSAAANEDF---------------------------------N 98 (198)
Q Consensus 81 ~----------------------------~~~~-~~~~~~~~~~~~---------------------------------~ 98 (198)
. +... .+..++.++.|+ .
T Consensus 185 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~ 264 (741)
T 2ecf_A 185 MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVK 264 (741)
T ss_dssp EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEE
T ss_pred EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeE
Confidence 1 0111 123355554443 7
Q ss_pred EEEEEccC-CCcceeeec--CCCcceEEEEEccCCCEEEEeec-----CCcEEEEEcCCCceeeEEeccCcc---cEEEE
Q psy8758 99 LYSYDIRQ-LNSPLNVHK--DMTSAVTSVDYSPTGREFVAGGY-----DKSLRLYLAHQGHSRDIYHTKRMQ---HVTHT 167 (198)
Q Consensus 99 i~~~d~~~-~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~-----d~~v~v~d~~~~~~~~~~~~~~~~---~v~~~ 167 (198)
|++||+.+ .. ...... .+...+..++| |||++|++++. +..|++||+.+++........... .+..+
T Consensus 265 l~~~d~~~~~~-~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 342 (741)
T 2ecf_A 265 LGVISPAEQAQ-TQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSL 342 (741)
T ss_dssp EEEECSSTTCC-CEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCC
T ss_pred EEEEECCCCCc-eEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCce
Confidence 88888875 32 222221 46778999999 99999987654 568999999999877665322222 34688
Q ss_pred EEcCCCCEEEEecCCCeEEEEecC
Q psy8758 168 VWSLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 168 ~~s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
+|+|||+++++++.||.+++|.++
T Consensus 343 ~~spdg~~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 343 RFLDDGSILWSSERTGFQHLYRID 366 (741)
T ss_dssp EECTTSCEEEEECTTSSCEEEEEC
T ss_pred EECCCCeEEEEecCCCccEEEEEc
Confidence 999999988888889987777665
No 155
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=5.1e-19 Score=138.18 Aligned_cols=181 Identities=12% Similarity=0.104 Sum_probs=129.6
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC-----
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ----- 77 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~----- 77 (198)
.|.+++|||| +.++.+ .++.+++||+.+++.. .+. .+...+..++|+|+++.++++ .++.|++||+.+
T Consensus 83 ~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~-~l~--~~~~~~~~~~~SpdG~~la~~--~~~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 83 PSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVT-YLF--DTNEETASLDFSPVGDRVAYV--RNHNLYIARGGKLGEGM 155 (706)
T ss_dssp CCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEE-EEE--CCTTCCTTCEECTTSSEEEEE--ETTEEEEEECBCTTSCC
T ss_pred CceeEEECCC-CeEEEE-ECCEEEEEECCCCceE-Ecc--CCcccccCCcCCCCCCEEEEE--ECCeEEEEecCcccccC
Confidence 5899999999 655555 3589999999877532 222 235668899999999999874 579999999876
Q ss_pred CCCc--cc-c------------------------ccCceEEEec---------------------------------CCC
Q psy8758 78 LNSP--LN-V------------------------HKDMTSAAAN---------------------------------EDF 97 (198)
Q Consensus 78 ~~~~--~~-~------------------------~~~~~~~~~~---------------------------------~~~ 97 (198)
.... .. . ..+..+++++ .+.
T Consensus 156 g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~ 235 (706)
T 2z3z_A 156 SRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHV 235 (706)
T ss_dssp CCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEE
T ss_pred CCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCee
Confidence 4321 00 0 1123455554 446
Q ss_pred cEEEEEccCCCcceeee--cCCCcceEEEEEccCCCEEEEeecCC-----cEEEEEcCCC-ceeeEEeccCcc---cEEE
Q psy8758 98 NLYSYDIRQLNSPLNVH--KDMTSAVTSVDYSPTGREFVAGGYDK-----SLRLYLAHQG-HSRDIYHTKRMQ---HVTH 166 (198)
Q Consensus 98 ~i~~~d~~~~~~~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~d~-----~v~v~d~~~~-~~~~~~~~~~~~---~v~~ 166 (198)
.|++||+.+ ++..... ..+...+..++|+|||+.|++++.++ .|++||+.++ .........+.. .+..
T Consensus 236 ~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 236 TVGIYHLAT-GKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEEETTT-TEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred EEEEEECCC-CceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 799999987 4433322 24567789999999999999887765 8999999998 443333222222 2467
Q ss_pred EEEcC--CCCEEEEecCCCeEEEEecC
Q psy8758 167 TVWSL--DNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 167 ~~~s~--~~~~l~~~~~dg~v~~w~~~ 191 (198)
++|+| ||+++++++.|+.+++|+++
T Consensus 315 ~~~sp~~dg~~l~~~~~~g~~~l~~~~ 341 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDGWNHLYLYD 341 (706)
T ss_dssp CEECTTCSSEEEEEECTTSSCEEEEEE
T ss_pred ceeecCCCCEEEEEEccCCccEEEEEE
Confidence 89999 99999999999999999876
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.83 E-value=1.7e-18 Score=124.14 Aligned_cols=183 Identities=10% Similarity=0.086 Sum_probs=130.5
Q ss_pred EEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--cc
Q psy8758 6 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LN 83 (198)
Q Consensus 6 ~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~ 83 (198)
.++++++++++++++.++.|++||+.+++....+... ....+..++|+|+++.+++++..++.|.+||+.+.... +.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMP-DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECS-SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecC-CCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 5678899999999999999999999888765554432 11156789999999988877778899999998754321 11
Q ss_pred ----------------cc-cCceEEEecC------------CCcEEEEEccCCCcc---eeeecCCCcceEEEEEccCCC
Q psy8758 84 ----------------VH-KDMTSAAANE------------DFNLYSYDIRQLNSP---LNVHKDMTSAVTSVDYSPTGR 131 (198)
Q Consensus 84 ----------------~~-~~~~~~~~~~------------~~~i~~~d~~~~~~~---~~~~~~~~~~i~~~~~sp~~~ 131 (198)
.. .+..++++.. ++.|.+||+.+ ++. +..+. +...+.+++|+|+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~-~~~~~~~~~~s~dg~ 160 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTAD-GLEAKPVRTFP-MPRQVYLMRAADDGS 160 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGG-GGGBCCSEEEE-CCSSCCCEEECTTSC
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCC-ccccceeeecc-CCCcccceeECCCCc
Confidence 11 1234555554 48999999986 222 22333 344688999999999
Q ss_pred EEEEeecCCcEEEEEcCCCceeeEEeccC---------------------------------------------------
Q psy8758 132 EFVAGGYDKSLRLYLAHQGHSRDIYHTKR--------------------------------------------------- 160 (198)
Q Consensus 132 ~l~~~~~d~~v~v~d~~~~~~~~~~~~~~--------------------------------------------------- 160 (198)
+++++ +.|.+||+.+++....+..+.
T Consensus 161 -l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 237 (349)
T 1jmx_B 161 -LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLS 237 (349)
T ss_dssp -EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEE
T ss_pred -EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEE
Confidence 55554 349999999887665542221
Q ss_pred ----------------cccEEEEEEcC-CCCEEEEecCCCeEEEEecCCCccc
Q psy8758 161 ----------------MQHVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 161 ----------------~~~v~~~~~s~-~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
...+..++|+| ++++++++ ++.|.+||+.+++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~ 288 (349)
T 1jmx_B 238 VDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLI 288 (349)
T ss_dssp EETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEE
T ss_pred EeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEE
Confidence 01355778889 99998887 889999999988754
No 157
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.83 E-value=3.7e-18 Score=123.64 Aligned_cols=187 Identities=9% Similarity=-0.002 Sum_probs=129.4
Q ss_pred EEEECCCCceEEEee----------CCCeEEEEEccCCceeeeeeeee----ecCceeeEEeCCCCCeEEEEecC-CccE
Q psy8758 6 HTVWSLDNKFVISAS----------DEMNLRVWKAHASEKLGPIRKVV----MSLRSNMVSWNPMEAFVFTAANE-DFNL 70 (198)
Q Consensus 6 ~~~~s~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~~~~-d~~i 70 (198)
.++|+|||++++++. .++.|.+||..+.+....+.... +......++|+|++++++++... ++.|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 789999999999886 36689999998877666654321 12346789999999999987543 6899
Q ss_pred EEEeccCCCCccc-------------cccCceEEEecCCCcEEEEEccCCCcce--------------------------
Q psy8758 71 YSYDIRQLNSPLN-------------VHKDMTSAAANEDFNLYSYDIRQLNSPL-------------------------- 111 (198)
Q Consensus 71 ~~~d~~~~~~~~~-------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~-------------------------- 111 (198)
.+||+.+.+.... ......+++.+.||.+.+++....++..
T Consensus 134 ~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 213 (361)
T 2oiz_A 134 GIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDK 213 (361)
T ss_dssp EEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSE
T ss_pred EEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCE
Confidence 9999976543211 1112345566667776666654312111
Q ss_pred ----------eeecCC-----------------------CcceEEEEEccCCCEEEEeec-----------CCcEEEEEc
Q psy8758 112 ----------NVHKDM-----------------------TSAVTSVDYSPTGREFVAGGY-----------DKSLRLYLA 147 (198)
Q Consensus 112 ----------~~~~~~-----------------------~~~i~~~~~sp~~~~l~~~~~-----------d~~v~v~d~ 147 (198)
..+... ......++|+|+++.++++.. .+.|.+||+
T Consensus 214 ~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~ 293 (361)
T 2oiz_A 214 AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDT 293 (361)
T ss_dssp EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEET
T ss_pred EEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEEC
Confidence 000000 000112788999887766543 348999999
Q ss_pred CCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC--ccc
Q psy8758 148 HQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS--EKL 196 (198)
Q Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~--~~~ 196 (198)
.+++.+..+..+ . +.+++|+|||++|++++. +.|.+||..++ +.+
T Consensus 294 ~t~~~v~~i~~~-~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~ 340 (361)
T 2oiz_A 294 KTKQRVARIPGR-D--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLL 340 (361)
T ss_dssp TTTEEEEEEECT-T--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEE
T ss_pred CCCcEEEEEecC-C--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceee
Confidence 999998887444 3 999999999999998876 99999999999 654
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.82 E-value=2.7e-19 Score=136.96 Aligned_cols=183 Identities=11% Similarity=0.075 Sum_probs=129.2
Q ss_pred ceeEEEECCCCceEEEeeC---CCeEEEEEccC--CceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758 3 HVTHTVWSLDNKFVISASD---EMNLRVWKAHA--SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~---d~~i~i~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~ 77 (198)
.+..++|||| +.+++++. +...++|.+.. ......+.. .......+|+|+++.++.+...++.+.+||+.+
T Consensus 66 ~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~---~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~ 141 (582)
T 3o4h_A 66 SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQRLEA---VKPMRILSGVDTGEAVVFTGATEDRVALYALDG 141 (582)
T ss_dssp EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCEECTT---SCSBEEEEEEECSSCEEEEEECSSCEEEEEEET
T ss_pred ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccccccC---CCCceeeeeCCCCCeEEEEecCCCCceEEEccC
Confidence 5788999999 77777664 45566766543 222222222 223446789999876554444556666999876
Q ss_pred CCCc-ccc---------ccCceEEEecCC----CcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC--c
Q psy8758 78 LNSP-LNV---------HKDMTSAAANED----FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK--S 141 (198)
Q Consensus 78 ~~~~-~~~---------~~~~~~~~~~~~----~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~--~ 141 (198)
.... +.. ..+..++.++.+ ..|++||+.+ ++ ...+..+...+..++|||||+.|+++..++ .
T Consensus 142 g~~~~l~~~~~~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~-g~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~ 219 (582)
T 3o4h_A 142 GGLRELARLPGFGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS-GG-LRVFDSGEGSFSSASISPGMKVTAGLETAREAR 219 (582)
T ss_dssp TEEEEEEEESSCEEEEEEETTEEEEEEEEETTEEEEEEEETTT-CC-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEE
T ss_pred CcEEEeecCCCceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC-CC-ceEeecCCCccccceECCCCCEEEEccCCCeeE
Confidence 5321 111 223445655555 6799999886 33 446777888899999999999999888888 8
Q ss_pred EEEEEcCCCceeeEEeccCcccEEEEE--------EcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 142 LRLYLAHQGHSRDIYHTKRMQHVTHTV--------WSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 142 v~v~d~~~~~~~~~~~~~~~~~v~~~~--------~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
|++||+.+++.. .. .+|...+..++ |+|||.++++++.|+.+++|++ |+.
T Consensus 220 i~~~d~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~ 277 (582)
T 3o4h_A 220 LVTVDPRDGSVE-DL-ELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GER 277 (582)
T ss_dssp EEEECTTTCCEE-EC-CCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEE
T ss_pred EEEEcCCCCcEE-Ec-cCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCe
Confidence 999999998877 33 56656666666 9999988899999999999998 554
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=2.6e-19 Score=140.14 Aligned_cols=188 Identities=11% Similarity=0.187 Sum_probs=126.6
Q ss_pred eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeee-cCceeeEEeCCCCCeEEEEec--------CCccEEEEec
Q psy8758 5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVM-SLRSNMVSWNPMEAFVFTAAN--------EDFNLYSYDI 75 (198)
Q Consensus 5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~--------~d~~i~~~d~ 75 (198)
.+++|+|+|++++++ .|+.|++||+.+++....+..... ...+.+++|+||++.++++.. .++.|++||+
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 367999999766554 699999999988875443332111 113789999999999987643 2689999998
Q ss_pred cCCCC----ccc-------cc-cCceEEEecCCCcEEEEEccCCCcceeee-cCCCcce-----------------EEEE
Q psy8758 76 RQLNS----PLN-------VH-KDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAV-----------------TSVD 125 (198)
Q Consensus 76 ~~~~~----~~~-------~~-~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i-----------------~~~~ 125 (198)
.+... .+. .. .+..++.+ .++.|++||+.+ ++..... .++...+ .+++
T Consensus 98 ~~g~~~~~~~l~~~~~~~~~SPDG~~la~~-~~~~i~~~~~~~-g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 98 SNGEFVRGNELPRPIQYLCWSPVGSKLAYV-YQNNIYLKQRPG-DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp TTTEECCSSCCCSSBCCEEECSSTTCEEEE-ETTEEEEESSTT-SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred CCCccccceecCcccccceECCCCCEEEEE-ECCeEEEEeCCC-CCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence 75532 111 11 12234444 478999999986 3433322 2222212 4899
Q ss_pred EccCCCEEEEeecCC----------------------------------cEEEEEcCCCcee---eEE----eccCcccE
Q psy8758 126 YSPTGREFVAGGYDK----------------------------------SLRLYLAHQGHSR---DIY----HTKRMQHV 164 (198)
Q Consensus 126 ~sp~~~~l~~~~~d~----------------------------------~v~v~d~~~~~~~---~~~----~~~~~~~v 164 (198)
|||||++|++++.|. .|++||+.+++.. ... ..+|...+
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYF 255 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEE
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceE
Confidence 999999999887652 7889999887653 111 12467789
Q ss_pred EEEEEcCCCCEEEEecCC----CeEEEEe----cCCCcc
Q psy8758 165 THTVWSLDNKFVISASDE----MNLRVWK----AHASEK 195 (198)
Q Consensus 165 ~~~~~s~~~~~l~~~~~d----g~v~~w~----~~~~~~ 195 (198)
..++||||++++++.... ..|++|| +.+++.
T Consensus 256 ~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~ 294 (719)
T 1z68_A 256 SWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC 294 (719)
T ss_dssp EEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC
T ss_pred EEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce
Confidence 999999998877764322 3488899 777664
No 160
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.81 E-value=2.4e-18 Score=139.68 Aligned_cols=181 Identities=14% Similarity=0.086 Sum_probs=140.5
Q ss_pred ceeEEEEC-CCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecC-ceeeEEeCCCCCeEEEEecCCccEE-EEeccCCC
Q psy8758 3 HVTHTVWS-LDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSL-RSNMVSWNPMEAFVFTAANEDFNLY-SYDIRQLN 79 (198)
Q Consensus 3 ~v~~~~~s-~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~d~~i~-~~d~~~~~ 79 (198)
.+.+++|| |+|+++++++ ++.+.+|++.+++.. .+.. +.. .+..++|+ +++.+++++ .+..++ +|++....
T Consensus 297 ~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~--~~~~~~~~~~~s-dg~~l~~~s-~~~~l~~~~d~~~~~ 370 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPE--PLRIRYVRRGGD-TKVAFIHGT-REGDFLGIYDYRTGK 370 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSC--CSCEEEEEECSS-SEEEEEEEE-TTEEEEEEEETTTCC
T ss_pred ccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccC--CCcceEEeeeEc-CCCeEEEEE-CCCceEEEEECCCCC
Confidence 58899999 9999999887 789999999776532 2222 344 68899999 999888765 578888 89976543
Q ss_pred C-ccccc-----------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC-------
Q psy8758 80 S-PLNVH-----------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK------- 140 (198)
Q Consensus 80 ~-~~~~~-----------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~------- 140 (198)
. .+..+ .+..+++++.++.+++||+.+ ++.......|...+.+++|||||++|++++.++
T Consensus 371 ~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t-g~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~ 449 (1045)
T 1k32_A 371 AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGY 449 (1045)
T ss_dssp EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-CCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSC
T ss_pred ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCC-CceEEeccCCCCCccceEECCCCCeEEEEecCccccccCC
Confidence 1 11111 234678888999999999987 566666667888899999999999998887654
Q ss_pred ---cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758 141 ---SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 192 (198)
Q Consensus 141 ---~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~ 192 (198)
.|++||+.+++. ..+ ..|...+..++|+|||++|++++.++...+|+...
T Consensus 450 ~~~~i~l~d~~~g~~-~~l-~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 450 VMQAIHVYDMEGRKI-FAA-TTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp CEEEEEEEETTTTEE-EEC-SCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred CCCeEEEEECCCCcE-EEe-eCCCcccCCceEcCCCCEEEEEecccCCcCcchhc
Confidence 899999998873 333 56677889999999999999998888888887653
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.81 E-value=2e-17 Score=119.85 Aligned_cols=170 Identities=7% Similarity=0.033 Sum_probs=110.2
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEcc-CCceeeeeeeeeecCceeeEEeCCCCCeE-EEEecCCccEEEEeccCCCC
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAH-ASEKLGPIRKVVMSLRSNMVSWNPMEAFV-FTAANEDFNLYSYDIRQLNS 80 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~d~~i~~~d~~~~~~ 80 (198)
.+..++|+|+|++|++++.+ .+.+|++. +++..... .....+.+..++|+|+++.+ +.+++ .+....
T Consensus 41 ~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~-~~~~~g~~~~~~~spdg~~l~~~~~~-~~~~~~-------- 109 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEA-SHPIGGHPRANDADTNTRAIFLLAAK-QPPYAV-------- 109 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEE-EEECCSSGGGGCTTSCCEEEEEEECS-STTCCE--------
T ss_pred CCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEee-EeecCCCCccEEECCCCCEEEEEEec-CCccee--------
Confidence 56789999999999998887 99999997 66543222 22212346679999999963 33332 110000
Q ss_pred ccccccCceEEEec----CCCcEEEEEccCCCcceeeec----CCCcceEEEEEccCCCEEEEeec-CCcEEEEEcC-CC
Q psy8758 81 PLNVHKDMTSAAAN----EDFNLYSYDIRQLNSPLNVHK----DMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAH-QG 150 (198)
Q Consensus 81 ~~~~~~~~~~~~~~----~~~~i~~~d~~~~~~~~~~~~----~~~~~i~~~~~sp~~~~l~~~~~-d~~v~v~d~~-~~ 150 (198)
.+. .++.+.+|++...++....+. .+...+.+++|+|||+++++++. ++.|++|++. ++
T Consensus 110 -----------~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g 178 (365)
T 1jof_A 110 -----------YANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASG 178 (365)
T ss_dssp -----------EEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS
T ss_pred -----------ccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCC
Confidence 000 234445555442133222222 24567899999999998887654 6799999998 67
Q ss_pred ceeeE--Eec-cCcccEEEEEEcCCCCEEEEecC-CCeEEEEecC--CCc
Q psy8758 151 HSRDI--YHT-KRMQHVTHTVWSLDNKFVISASD-EMNLRVWKAH--ASE 194 (198)
Q Consensus 151 ~~~~~--~~~-~~~~~v~~~~~s~~~~~l~~~~~-dg~v~~w~~~--~~~ 194 (198)
+.... +.. .|...+..++|+|||+++++++. ++.|.+|+++ +++
T Consensus 179 ~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~ 228 (365)
T 1jof_A 179 EVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHM 228 (365)
T ss_dssp CEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred CEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCc
Confidence 65332 211 23567999999999998877664 7899999765 454
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=7.1e-19 Score=137.64 Aligned_cols=186 Identities=12% Similarity=0.057 Sum_probs=126.3
Q ss_pred ceeEEEECCCCceEEEeeC---------CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEE
Q psy8758 3 HVTHTVWSLDNKFVISASD---------EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSY 73 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~---------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~ 73 (198)
.+.+++|||||++|+.++. ++.|++||+.+++.... ... ...+..++|+|||+.++++ .++.|++|
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~-~~l--~~~~~~~~~SPDG~~la~~--~~~~i~~~ 135 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG-NEL--PRPIQYLCWSPVGSKLAYV--YQNNIYLK 135 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-SCC--CSSBCCEEECSSTTCEEEE--ETTEEEEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccc-eec--CcccccceECCCCCEEEEE--ECCeEEEE
Confidence 3789999999999998876 68999999988764210 111 2457889999999999876 37899999
Q ss_pred eccCCCCc------------------------------cccc-cCceEEEecCCC-------------------------
Q psy8758 74 DIRQLNSP------------------------------LNVH-KDMTSAAANEDF------------------------- 97 (198)
Q Consensus 74 d~~~~~~~------------------------------~~~~-~~~~~~~~~~~~------------------------- 97 (198)
++.+.... +... .+..++.++.|.
T Consensus 136 ~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp 215 (719)
T 1z68_A 136 QRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYP 215 (719)
T ss_dssp SSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECC
T ss_pred eCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCC
Confidence 98653311 1111 123455544331
Q ss_pred ---------cEEEEEccCCCcce--------eeecCCCcceEEEEEccCCCEEEEeecC----CcEEEEE----cCCCce
Q psy8758 98 ---------NLYSYDIRQLNSPL--------NVHKDMTSAVTSVDYSPTGREFVAGGYD----KSLRLYL----AHQGHS 152 (198)
Q Consensus 98 ---------~i~~~d~~~~~~~~--------~~~~~~~~~i~~~~~sp~~~~l~~~~~d----~~v~v~d----~~~~~~ 152 (198)
.|++||+.+ ++.. ..+..|...+..++|+||++++++.... ..|.+|| +.+++.
T Consensus 216 ~~g~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~ 294 (719)
T 1z68_A 216 KAGAKNPVVRIFIIDTTY-PAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC 294 (719)
T ss_dssp BTTSCCCEEEEEEEESSC-HHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC
T ss_pred CCCCCCCeeEEEEEECCC-CCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce
Confidence 788999886 3321 1233577789999999998877764432 2488899 777765
Q ss_pred eeEEe---ccCcccEE-----EEEEcCCCCEEEE--ecCCC--eEEEEecCCCc
Q psy8758 153 RDIYH---TKRMQHVT-----HTVWSLDNKFVIS--ASDEM--NLRVWKAHASE 194 (198)
Q Consensus 153 ~~~~~---~~~~~~v~-----~~~~s~~~~~l~~--~~~dg--~v~~w~~~~~~ 194 (198)
..... .+|...+. .+.|+|||+.|+. +..+| .|++||+.+++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~ 348 (719)
T 1z68_A 295 PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN 348 (719)
T ss_dssp CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT
T ss_pred EEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc
Confidence 54432 35556665 7899999996543 44455 57777877654
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=3.7e-18 Score=124.35 Aligned_cols=183 Identities=13% Similarity=0.093 Sum_probs=123.4
Q ss_pred EEECCCCceEEEeeC-CC--eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc-
Q psy8758 7 TVWSLDNKFVISASD-EM--NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL- 82 (198)
Q Consensus 7 ~~~s~~~~~l~~~~~-d~--~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~- 82 (198)
.+|||||++|+.++. ++ .|.+||+.+++....... +...+..+.|+|+++.|+++. .++.+++||+.+.....
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~--~~~~~~~~~~spdg~~l~~~~-~~~~l~~~d~~~g~~~~~ 117 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG--RGDNTFGGFLSPDDDALFYVK-DGRNLMRVDLATLEENVV 117 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS--SCBCSSSCEECTTSSEEEEEE-TTTEEEEEETTTCCEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC--CCCCccceEEcCCCCEEEEEe-CCCeEEEEECCCCcceee
Confidence 789999999998887 66 488888877764332221 233344678999999998864 67899999998654321
Q ss_pred -ccc-------------cCceEEE----------------------ecCCCcEEEEEccCCCcceeeecCCCcceEEEEE
Q psy8758 83 -NVH-------------KDMTSAA----------------------ANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDY 126 (198)
Q Consensus 83 -~~~-------------~~~~~~~----------------------~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~ 126 (198)
..+ .+..++. ...+..|++||+.+ ++ ...+..+...+..++|
T Consensus 118 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~-g~-~~~l~~~~~~~~~~~~ 195 (388)
T 3pe7_A 118 YQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKT-GE-STVILQENQWLGHPIY 195 (388)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTT-CC-EEEEEEESSCEEEEEE
T ss_pred eechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCC-Cc-eEEeecCCccccccEE
Confidence 111 1111221 22446788999887 33 4445456667899999
Q ss_pred cc-CCCEEEEeecC------CcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecC-C----CeEEEEecCCC
Q psy8758 127 SP-TGREFVAGGYD------KSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASD-E----MNLRVWKAHAS 193 (198)
Q Consensus 127 sp-~~~~l~~~~~d------~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~-d----g~v~~w~~~~~ 193 (198)
+| ||+.|+....+ ..|.++|...+...... .... ..+..++|+|||+.|+..+. + ..|++||+.++
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (388)
T 3pe7_A 196 RPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK-THAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETL 274 (388)
T ss_dssp ETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC-CCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTC
T ss_pred CCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee-eCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCC
Confidence 99 99988877653 37888887766554433 2221 35788999999997765432 2 23999999988
Q ss_pred cc
Q psy8758 194 EK 195 (198)
Q Consensus 194 ~~ 195 (198)
+.
T Consensus 275 ~~ 276 (388)
T 3pe7_A 275 EN 276 (388)
T ss_dssp CE
T ss_pred ce
Confidence 73
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=3.4e-17 Score=118.69 Aligned_cols=190 Identities=11% Similarity=0.084 Sum_probs=124.9
Q ss_pred eeEEEECCCCce--EEEee-------------CCCeEEEEEcc-CCceeeeeeee--eecCceeeEEeCCCCCeEEEEec
Q psy8758 4 VTHTVWSLDNKF--VISAS-------------DEMNLRVWKAH-ASEKLGPIRKV--VMSLRSNMVSWNPMEAFVFTAAN 65 (198)
Q Consensus 4 v~~~~~s~~~~~--l~~~~-------------~d~~i~i~~~~-~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~ 65 (198)
+.+++|+|+|++ ++++. .++.+.+|++. +++....+... .+...+.+++|+|++++++++..
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC
Confidence 455789999994 55553 68999999997 45543333322 13456889999999999887655
Q ss_pred CCccEEEEecc-CCCCc----cc--c----------c-cCceEEE-ecCCCcEEEEEccCC-Ccce---eeec---C---
Q psy8758 66 EDFNLYSYDIR-QLNSP----LN--V----------H-KDMTSAA-ANEDFNLYSYDIRQL-NSPL---NVHK---D--- 116 (198)
Q Consensus 66 ~d~~i~~~d~~-~~~~~----~~--~----------~-~~~~~~~-~~~~~~i~~~d~~~~-~~~~---~~~~---~--- 116 (198)
.++.|++|++. +.... +. . + .+..+++ ...++.+.+|++... ++.. ..+. .
T Consensus 165 ~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 244 (365)
T 1jof_A 165 TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIP 244 (365)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCC
T ss_pred CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcC
Confidence 57899999987 33211 11 0 1 1123444 445788999987531 2221 1121 1
Q ss_pred -CCc------ceEEEE-EccCCCEEEEeecC-C-----cEEEEEcC-CCceeeEE--eccCcccEEEEEEcC---CCCEE
Q psy8758 117 -MTS------AVTSVD-YSPTGREFVAGGYD-K-----SLRLYLAH-QGHSRDIY--HTKRMQHVTHTVWSL---DNKFV 176 (198)
Q Consensus 117 -~~~------~i~~~~-~sp~~~~l~~~~~d-~-----~v~v~d~~-~~~~~~~~--~~~~~~~v~~~~~s~---~~~~l 176 (198)
+.. .+..++ |+|||++|++++.+ + .|.+|++. +++..... ...+...+..++|+| ||++|
T Consensus 245 g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l 324 (365)
T 1jof_A 245 DRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWM 324 (365)
T ss_dssp CBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEE
T ss_pred CcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEE
Confidence 121 478999 99999988876643 2 89999996 56554321 122334566789999 89999
Q ss_pred EEecC-CCeEEEEecCCC
Q psy8758 177 ISASD-EMNLRVWKAHAS 193 (198)
Q Consensus 177 ~~~~~-dg~v~~w~~~~~ 193 (198)
++++. ++.|.+|+++..
T Consensus 325 ~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 325 AITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEECSSSCEEEEEEEETT
T ss_pred EEEEcCCCeEEEEEEchh
Confidence 98876 489999998765
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.77 E-value=2e-17 Score=129.96 Aligned_cols=152 Identities=16% Similarity=0.220 Sum_probs=103.6
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeec---CceeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMS---LRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
....++|+|+|++++++ |+.|++||+.+++....+..+... .....+.||||++.++++. .+..+ |..
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~-~~~~~--~r~---- 88 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEY-NYVKQ--WRH---- 88 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEE-EEEEC--SSS----
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEE-CCeee--EEE----
Confidence 35689999999998886 899999999988765444332211 1123478999999998764 33221 110
Q ss_pred CccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEecc
Q psy8758 80 SPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK 159 (198)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~ 159 (198)
+..+.+++||+.+ ++ ...+..+...+...+|||||+.||.+. ++.|++|++.+++.......+
T Consensus 89 --------------~~~~~~~~~d~~~-~~-~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g 151 (740)
T 4a5s_A 89 --------------SYTASYDIYDLNK-RQ-LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTG 151 (740)
T ss_dssp --------------CEEEEEEEEETTT-TE-ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCC
T ss_pred --------------ccceEEEEEECCC-Cc-EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCC
Confidence 0123355566554 33 344566777899999999999999884 789999999988765543233
Q ss_pred CcccE-----------------EEEEEcCCCCEEEEec
Q psy8758 160 RMQHV-----------------THTVWSLDNKFVISAS 180 (198)
Q Consensus 160 ~~~~v-----------------~~~~~s~~~~~l~~~~ 180 (198)
+...+ ..+.|||||+.||..+
T Consensus 152 ~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 152 KEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp BTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred CccceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 32222 3489999999998764
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.75 E-value=7.6e-16 Score=110.14 Aligned_cols=192 Identities=11% Similarity=0.051 Sum_probs=134.2
Q ss_pred CcceeEEEECCCCceEEEeeCC------------------------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCC
Q psy8758 1 MQHVTHTVWSLDNKFVISASDE------------------------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM 56 (198)
Q Consensus 1 ~~~v~~~~~s~~~~~l~~~~~d------------------------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 56 (198)
++.+.+++++|+|+++++...+ +.|.+||..+++....... ..-..+..++++|+
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~p~gia~d~~ 101 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK-NLFYLPHGLSIDTD 101 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT-TTCSSEEEEEECTT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC-CccCCceEEEECCC
Confidence 3578999999999988887766 4799999988875443321 12235789999999
Q ss_pred CCeEEEEecCCccEEEEeccCCC---Ccc-------------------ccc--cCceEEEec-CCCcEEEEEccCCCcce
Q psy8758 57 EAFVFTAANEDFNLYSYDIRQLN---SPL-------------------NVH--KDMTSAAAN-EDFNLYSYDIRQLNSPL 111 (198)
Q Consensus 57 ~~~~~~~~~~d~~i~~~d~~~~~---~~~-------------------~~~--~~~~~~~~~-~~~~i~~~d~~~~~~~~ 111 (198)
++.+ ++...++.|+.||..... ..+ ... .+.++++.+ .++.|++||.. +..+
T Consensus 102 g~l~-v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~--g~~~ 178 (329)
T 3fvz_A 102 GNYW-VTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS--GKFV 178 (329)
T ss_dssp SCEE-EEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT--SCEE
T ss_pred CCEE-EEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC--CCEE
Confidence 9954 555678999999976431 111 111 234556654 68889999944 4555
Q ss_pred eeecC----------CCcceEEEEEccC-CCEEEEeecCCcEEEEEcCCCceeeEEe-ccCcccEEEEEEcC------CC
Q psy8758 112 NVHKD----------MTSAVTSVDYSPT-GREFVAGGYDKSLRLYLAHQGHSRDIYH-TKRMQHVTHTVWSL------DN 173 (198)
Q Consensus 112 ~~~~~----------~~~~i~~~~~sp~-~~~l~~~~~d~~v~v~d~~~~~~~~~~~-~~~~~~v~~~~~s~------~~ 173 (198)
..+.. +-.....++++|+ ++++++...++.|++||..+++.+..+. ..+...+..++|+| +|
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g 258 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNG 258 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEEC
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCC
Confidence 55532 1234789999999 7777777889999999999888877663 23456788999999 33
Q ss_pred CEEEEecCCCeEEEEecCCCccc
Q psy8758 174 KFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 174 ~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+.+++...+..|++|++.+++.+
T Consensus 259 ~~~v~~~~~~~v~~~~~~~g~~~ 281 (329)
T 3fvz_A 259 KPYFGDQEPVQGFVMNFSSGEII 281 (329)
T ss_dssp CCCTTCSCCCCEEEEETTTCCEE
T ss_pred CEEeccCCCcEEEEEEcCCCeEE
Confidence 33333344568999999888764
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.74 E-value=2.4e-16 Score=123.92 Aligned_cols=186 Identities=11% Similarity=0.101 Sum_probs=122.6
Q ss_pred eEEEECCCCceEEEeeCC---------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758 5 THTVWSLDNKFVISASDE---------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI 75 (198)
Q Consensus 5 ~~~~~s~~~~~l~~~~~d---------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~ 75 (198)
..++|||||++|+.++.+ +.+.+||+.+++.. .+.. +...+..++|||||+.|+.+ .++.|++|++
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~--~~~~~~~~~~SPdG~~la~~--~~~~i~~~~~ 139 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEER--IPNNTQWVTWSPVGHKLAYV--WNNDIYVKIE 139 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSC--CCTTEEEEEECSSTTCEEEE--ETTEEEEESS
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-Eccc--CCCcceeeEECCCCCEEEEE--ECCeEEEEEC
Confidence 348899999999998876 56679999887643 3332 35668899999999999876 4689999998
Q ss_pred cCCCCc-----------ccc-------------------c-cCceEEEecCC----------------------------
Q psy8758 76 RQLNSP-----------LNV-------------------H-KDMTSAAANED---------------------------- 96 (198)
Q Consensus 76 ~~~~~~-----------~~~-------------------~-~~~~~~~~~~~---------------------------- 96 (198)
...... +.+ . .+..++....|
T Consensus 140 ~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp 219 (740)
T 4a5s_A 140 PNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYP 219 (740)
T ss_dssp TTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECC
T ss_pred CCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCC
Confidence 653311 100 1 11223332111
Q ss_pred --------CcEEEEEccC---CCc-ceeeec------CCCcceEEEEEccCCCEEEEeec----CCcEEEEEcCCCc---
Q psy8758 97 --------FNLYSYDIRQ---LNS-PLNVHK------DMTSAVTSVDYSPTGREFVAGGY----DKSLRLYLAHQGH--- 151 (198)
Q Consensus 97 --------~~i~~~d~~~---~~~-~~~~~~------~~~~~i~~~~~sp~~~~l~~~~~----d~~v~v~d~~~~~--- 151 (198)
.+|++||+.+ ... ....+. .+...+..++|+|||+.++.... +..|++||+.+++
T Consensus 220 ~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~ 299 (740)
T 4a5s_A 220 KAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRW 299 (740)
T ss_dssp BTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEE
T ss_pred CCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCcccc
Confidence 1477788875 321 222333 26777999999999996665432 3479999999887
Q ss_pred ----eeeEEeccCcccEE-----EEEEcCCCCEEE-Eec-CC--CeEEEEecCCCcc
Q psy8758 152 ----SRDIYHTKRMQHVT-----HTVWSLDNKFVI-SAS-DE--MNLRVWKAHASEK 195 (198)
Q Consensus 152 ----~~~~~~~~~~~~v~-----~~~~s~~~~~l~-~~~-~d--g~v~~w~~~~~~~ 195 (198)
....+...|...+. .+.|+|||+.|+ ..+ .+ ..|++||+.+++.
T Consensus 300 ~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 300 NCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp EECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred ceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce
Confidence 22232344555544 789999999776 554 33 4688888877654
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=6.2e-16 Score=120.02 Aligned_cols=190 Identities=14% Similarity=0.131 Sum_probs=128.7
Q ss_pred cceeEEEECCCCceEEEe--eCCCeEEEEEccCCceeeeeeeeeecCcee---------eEEeC--CCCCe-EEEEecCC
Q psy8758 2 QHVTHTVWSLDNKFVISA--SDEMNLRVWKAHASEKLGPIRKVVMSLRSN---------MVSWN--PMEAF-VFTAANED 67 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~--~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-~~~~~~~d 67 (198)
..+..++|++++.+++.. +.++...||....+.....+... ...+. ...|+ ||++. ++.+...+
T Consensus 24 ~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~ 101 (662)
T 3azo_A 24 GRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPA--PWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGD 101 (662)
T ss_dssp SCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCT--TCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTT
T ss_pred CccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCC--CccccccccccCCccceeeeecCCCeEEEEEECCC
Confidence 357889999887677766 56888999996444433444322 22333 45565 99998 87765557
Q ss_pred ccEEEEecc----CCCCcccc-----c-----------cCceEEEecCC----------CcEEEEEccCCC----cceee
Q psy8758 68 FNLYSYDIR----QLNSPLNV-----H-----------KDMTSAAANED----------FNLYSYDIRQLN----SPLNV 113 (198)
Q Consensus 68 ~~i~~~d~~----~~~~~~~~-----~-----------~~~~~~~~~~~----------~~i~~~d~~~~~----~~~~~ 113 (198)
..|+++++. .....+.. + .+..++..+.+ ..|++||+.... .....
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 181 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE 181 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE
Confidence 788888876 22222222 1 12345555544 578999987521 34455
Q ss_pred ec-CCCcceEEEEEccCCCEEEEeecC--------CcEEEEEcC-CC---ceeeEEeccCcccEEEEEEcCCCCEEEEec
Q psy8758 114 HK-DMTSAVTSVDYSPTGREFVAGGYD--------KSLRLYLAH-QG---HSRDIYHTKRMQHVTHTVWSLDNKFVISAS 180 (198)
Q Consensus 114 ~~-~~~~~i~~~~~sp~~~~l~~~~~d--------~~v~v~d~~-~~---~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 180 (198)
+. .+...+..++|||||++|+.++.+ ..|++||+. ++ +... +..++...+..+.|+|||++++++.
T Consensus 182 l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~-l~~~~~~~~~~~~~spdg~l~~~~~ 260 (662)
T 3azo_A 182 LSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT-LLGGPEEAIAQAEWAPDGSLIVATD 260 (662)
T ss_dssp SSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE-EEEETTBCEEEEEECTTSCEEEEEC
T ss_pred EEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE-eCCCCCceEcceEECCCCeEEEEEC
Confidence 55 566778889999999999987755 379999999 56 3333 3345567899999999999877887
Q ss_pred CCC--eEEEEecCCCc
Q psy8758 181 DEM--NLRVWKAHASE 194 (198)
Q Consensus 181 ~dg--~v~~w~~~~~~ 194 (198)
.++ .|++||+.+++
T Consensus 261 ~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 261 RTGWWNLHRVDPATGA 276 (662)
T ss_dssp TTSSCEEEEECTTTCC
T ss_pred CCCCeEEEEEECCCCc
Confidence 788 67777776664
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.73 E-value=2.4e-16 Score=114.87 Aligned_cols=185 Identities=16% Similarity=0.104 Sum_probs=121.2
Q ss_pred eeEEEECCCCceEEEeeCC---CeEEEEEccCCceeeeeeeeeecCc-eeeEEeCCCCCeEEEEecCCccEEEEeccCCC
Q psy8758 4 VTHTVWSLDNKFVISASDE---MNLRVWKAHASEKLGPIRKVVMSLR-SNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN 79 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d---~~i~i~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~ 79 (198)
+.+++|||||++|+..... ..|.+||+.+++. ..+.. .... ...+.|+|+++.|+.+. .++.+++||+....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~-~~l~~--~~~~~~~~~~~spdg~~l~~~~-~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA-VQLTE--GKGDNTFGGFISTDERAFFYVK-NELNLMKVDLETLE 113 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEE-EECCC--SSCBCTTTCEECTTSSEEEEEE-TTTEEEEEETTTCC
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcE-EEeec--CCCCccccceECCCCCEEEEEE-cCCcEEEEECCCCC
Confidence 5778999999998776543 4688889877653 22222 1222 23478999999998764 66789999987654
Q ss_pred Cc--cccccC-----ceEEEe------------------------------cCCCcEEEEEccCCCcceeeecCCCcceE
Q psy8758 80 SP--LNVHKD-----MTSAAA------------------------------NEDFNLYSYDIRQLNSPLNVHKDMTSAVT 122 (198)
Q Consensus 80 ~~--~~~~~~-----~~~~~~------------------------------~~~~~i~~~d~~~~~~~~~~~~~~~~~i~ 122 (198)
.. ...+.. ..++.. ..+..|++||+.+ ++.. .+..+...+.
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~-g~~~-~~~~~~~~~~ 191 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIET-GELE-VIHQDTAWLG 191 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTT-CCEE-EEEEESSCEE
T ss_pred cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCC-CcEE-eeccCCcccc
Confidence 21 111111 111110 3456789999986 3433 3334566789
Q ss_pred EEEEcc-CCCEEEEeecC------CcEEEEEcCCCceeeEEeccC-cccEEEEEEcCCCCEEEEecCC-----CeEEEEe
Q psy8758 123 SVDYSP-TGREFVAGGYD------KSLRLYLAHQGHSRDIYHTKR-MQHVTHTVWSLDNKFVISASDE-----MNLRVWK 189 (198)
Q Consensus 123 ~~~~sp-~~~~l~~~~~d------~~v~v~d~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~ 189 (198)
.+.|+| +++.|+..+.+ ..|.+||+..++..... ... ...+..++|+|||++|+..+.+ +.|++||
T Consensus 192 ~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~-~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (396)
T 3c5m_A 192 HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIK-EHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKAN 270 (396)
T ss_dssp EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESS-CCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEEC
T ss_pred cceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEee-ccCCCccccceEECCCCCEEEEEecCCCCccceEEEEE
Confidence 999999 78877665543 46888998776544332 221 2468889999999987766433 4599999
Q ss_pred cCCCcc
Q psy8758 190 AHASEK 195 (198)
Q Consensus 190 ~~~~~~ 195 (198)
+.+++.
T Consensus 271 ~~~g~~ 276 (396)
T 3c5m_A 271 PETLEN 276 (396)
T ss_dssp TTTCCE
T ss_pred CCCCCe
Confidence 988764
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.73 E-value=4.8e-15 Score=103.77 Aligned_cols=160 Identities=12% Similarity=0.150 Sum_probs=112.8
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL 82 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 82 (198)
.+.+++++|+|+++++...++.|.+|+.. ++....+........+..++++|+++.+ ++...++.|.+||...
T Consensus 122 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~-v~~~~~~~i~~~~~~g----- 194 (286)
T 1q7f_A 122 HPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIF-ISDNRAHCVKVFNYEG----- 194 (286)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEE-EEEGGGTEEEEEETTC-----
T ss_pred CceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEE-EEECCCCEEEEEcCCC-----
Confidence 46889999999988777778899999964 4443333221123457899999988744 4445677888887532
Q ss_pred ccccCceEEEecCCCcEEEEEccCCCcceeeecC--CCcceEEEEEccCCCEEEEeecCC-cEEEEEcCCCceeeEEecc
Q psy8758 83 NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD--MTSAVTSVDYSPTGREFVAGGYDK-SLRLYLAHQGHSRDIYHTK 159 (198)
Q Consensus 83 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~i~~~~~sp~~~~l~~~~~d~-~v~v~d~~~~~~~~~~~~~ 159 (198)
..+..+.. +...+..++++|+|+++++...++ .|.+||.. ++.+..+...
T Consensus 195 --------------------------~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~ 247 (286)
T 1q7f_A 195 --------------------------QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESK 247 (286)
T ss_dssp --------------------------CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEES
T ss_pred --------------------------CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEccc
Confidence 23333322 235678999999999888887776 99999964 5554444222
Q ss_pred -CcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758 160 -RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE 197 (198)
Q Consensus 160 -~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~ 197 (198)
....+.+++++|+|+++++ +.|+.|++|++....+++
T Consensus 248 ~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~pvg 285 (286)
T 1q7f_A 248 VKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLAPVG 285 (286)
T ss_dssp SCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCCCTT
T ss_pred CCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccccccC
Confidence 2234789999999987777 568999999998776654
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=5.1e-15 Score=105.83 Aligned_cols=189 Identities=13% Similarity=0.115 Sum_probs=132.5
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCc-eeeeeee-------eeecCceeeEEeCC-CCCeEEEEec-CCccEEE
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASE-KLGPIRK-------VVMSLRSNMVSWNP-MEAFVFTAAN-EDFNLYS 72 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~-~~~~~~~-------~~~~~~v~~~~~~~-~~~~~~~~~~-~d~~i~~ 72 (198)
....++++|+|+++++...++.|++|+..... .+..+.. ..+-..+..++++| ++..+ ++.+ .++.|++
T Consensus 92 ~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~ly-v~d~~~~~~I~~ 170 (329)
T 3fvz_A 92 LPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVF-VSDGYCNSRIVQ 170 (329)
T ss_dssp SEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEE-EEECSSCCEEEE
T ss_pred CceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEE-EEeCCCCCeEEE
Confidence 46789999999988888888999999975432 2333321 01122468999999 55544 4444 5889999
Q ss_pred EeccCCCC-c--------------------cc--cccCceEEEecCCCcEEEEEccCCCcceeeec--CCCcceEEEEEc
Q psy8758 73 YDIRQLNS-P--------------------LN--VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK--DMTSAVTSVDYS 127 (198)
Q Consensus 73 ~d~~~~~~-~--------------------~~--~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~s 127 (198)
|+...... . +. ...+.++++...++.|++||..+ ++.+..+. .+...+..++++
T Consensus 171 ~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~ 249 (329)
T 3fvz_A 171 FSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT-KEFVREIKHASFGRNVFAISYI 249 (329)
T ss_dssp ECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT-CCEEEEECCTTTTTCEEEEEEE
T ss_pred EcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC-CcEEEEEeccccCCCcceeeec
Confidence 98532110 0 00 11245677777888999999985 56666663 355678899999
Q ss_pred c------CCCEEEEeecCCcEEEEEcCCCceeeEEe--ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758 128 P------TGREFVAGGYDKSLRLYLAHQGHSRDIYH--TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS 193 (198)
Q Consensus 128 p------~~~~l~~~~~d~~v~v~d~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~ 193 (198)
| +|+.+++...+..|++||..+++.+..+. ..+...+..++++|+|.++++...++.|++|++...
T Consensus 250 pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 250 PGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp TTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred CCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 9 33333333345689999999998887763 345567899999999988888888999999998654
No 172
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.71 E-value=4.6e-16 Score=120.74 Aligned_cols=166 Identities=10% Similarity=0.039 Sum_probs=109.0
Q ss_pred ceeEEEECCCCceEEEeeCC----------CeEEEEEccC------CceeeeeeeeeecCceeeEEeCCCCCeEEEEecC
Q psy8758 3 HVTHTVWSLDNKFVISASDE----------MNLRVWKAHA------SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE 66 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d----------~~i~i~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 66 (198)
.+.+++|||||+.|+.++.+ ..|++||+.+ ++ ...+.. .+...+..++|+|||+.|+.+...
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~-~~~~~~~~~~~SpDG~~la~~~~~ 208 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSD-DAHRFVTGPRLSPDGRQAVWLAWD 208 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSC-SCSSEECCCEECTTSSEEEEEEEC
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEe-cCCCcccCceECCCCCEEEEEECC
Confidence 46789999999999988876 5899999987 43 333330 123567789999999999876532
Q ss_pred CccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCC---cceeeecCCCcceEEEEEccCCCEEEEeecCC--c
Q psy8758 67 DFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLN---SPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK--S 141 (198)
Q Consensus 67 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~--~ 141 (198)
. ...-| ....|++||+...+ ........+...+..++|+|||+++++++.++ .
T Consensus 209 ~-~~~~~---------------------~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~ 266 (662)
T 3azo_A 209 H-PRMPW---------------------EGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWN 266 (662)
T ss_dssp T-TCCTT---------------------TCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCE
T ss_pred C-CCCCC---------------------CCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeE
Confidence 2 00000 01234444444112 23333334567889999999999888888888 5
Q ss_pred EEEEEcCCCceeeEEeccCccc--------EEEEEEcCCCCEEEEecCCCeEEEE--ecCCCc
Q psy8758 142 LRLYLAHQGHSRDIYHTKRMQH--------VTHTVWSLDNKFVISASDEMNLRVW--KAHASE 194 (198)
Q Consensus 142 v~v~d~~~~~~~~~~~~~~~~~--------v~~~~~s~~~~~l~~~~~dg~v~~w--~~~~~~ 194 (198)
|.+||+.+++..... ..+... +..++|+|++++++++.. +.+++| |+.+++
T Consensus 267 l~~~~~~~~~~~~l~-~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 267 LHRVDPATGAATQLC-RREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp EEEECTTTCCEEESS-CCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred EEEEECCCCceeecc-cccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence 666676666654433 222221 567899999999999888 999999 555444
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.69 E-value=2.5e-14 Score=100.12 Aligned_cols=185 Identities=8% Similarity=0.076 Sum_probs=126.1
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee----ecCceeeEEeC-CCCCeEEEEecCCccEEEEeccC
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV----MSLRSNMVSWN-PMEAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~----~~~~v~~~~~~-~~~~~~~~~~~~d~~i~~~d~~~ 77 (198)
...+++++++++++++...++.|.+||.. ++....+.... +...+..+++. +++..+++....++.|.+||...
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g 109 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYG 109 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTS
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCC
Confidence 57889999999988887888999999986 44444332211 12356789994 55554443222378899998432
Q ss_pred CCC-cc-----------c-cccCceEEEecCCCcEEEEEccCCCcceeeec--CCCcceEEEEEccCCCEEEEeecCCcE
Q psy8758 78 LNS-PL-----------N-VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK--DMTSAVTSVDYSPTGREFVAGGYDKSL 142 (198)
Q Consensus 78 ~~~-~~-----------~-~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~d~~v 142 (198)
... .+ . ...+.++++...++.|.+||.. ++.+..+. .+...+..++++|+|+++++...++.|
T Consensus 110 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i 187 (286)
T 1q7f_A 110 QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN--GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCV 187 (286)
T ss_dssp CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT--SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEE
T ss_pred cEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC--CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEE
Confidence 110 01 0 1123456666678889999965 34444443 344568999999999988888889999
Q ss_pred EEEEcCCCceeeEEe-ccCcccEEEEEEcCCCCEEEEecCCC-eEEEEecC
Q psy8758 143 RLYLAHQGHSRDIYH-TKRMQHVTHTVWSLDNKFVISASDEM-NLRVWKAH 191 (198)
Q Consensus 143 ~v~d~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg-~v~~w~~~ 191 (198)
++||.. ++.+..+. .++...+..++++|+|+++++...++ .|.+|+..
T Consensus 188 ~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 188 KVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred EEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 999974 44444442 12235789999999999888887776 99999964
No 174
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.69 E-value=2.8e-15 Score=108.61 Aligned_cols=162 Identities=16% Similarity=0.115 Sum_probs=120.3
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCce--------eeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEe
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEK--------LGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYD 74 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d 74 (198)
+++.+++++...++++|+.+ .+.+|++.+.+. ........... |..++| ++..++++ .++.|++||
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~--~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS--TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE--ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE--cCCcEEEEE
Confidence 58899999999999999988 577798764330 11112223455 999999 88888775 779999999
Q ss_pred ccCCCCcc------------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcE
Q psy8758 75 IRQLNSPL------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSL 142 (198)
Q Consensus 75 ~~~~~~~~------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v 142 (198)
+++....- ....+ .+++++.||.+.+||+.+ ..... +...|++++|||+| ++.+..||.+
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p-~~av~~~dG~L~v~dl~~-~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN-TLVILNSVNDLSALDLRT-KSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS-EEEEEETTSEEEEEETTT-CCEEE----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred chhhhccCccceeecceeeEEecCC-CEEEEECCCCEEEEEccC-Ccccc----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 87654321 11111 388889999999999986 33332 45689999999999 7788999999
Q ss_pred EEEEcCCCce--eeEEe-----c---cCcccEEEEEEcCCCCEEEE
Q psy8758 143 RLYLAHQGHS--RDIYH-----T---KRMQHVTHTVWSLDNKFVIS 178 (198)
Q Consensus 143 ~v~d~~~~~~--~~~~~-----~---~~~~~v~~~~~s~~~~~l~~ 178 (198)
++|+...++. ...+. . +|...|.++.|.++++++++
T Consensus 185 ~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 185 QSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 9998887775 33341 1 36788999999999998876
No 175
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=4.2e-14 Score=98.00 Aligned_cols=190 Identities=7% Similarity=-0.009 Sum_probs=131.0
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL 82 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 82 (198)
.+.+++++++|+++++.. ++.|.+||...... ..+.. .....+..++++|++..++ +...++.|..|+..+.....
T Consensus 68 ~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~-~~~~~p~~i~~~~~g~l~v-~~~~~~~i~~~~~~~~~~~~ 143 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQ-TVLPF-DGLNYPEGLAVDTQGAVYV-ADRGNNRVVKLAAGSKTQTV 143 (270)
T ss_dssp SCCCEEECTTCCEEEEET-TTEEEEECTTCSCC-EECCC-CSCSSEEEEEECTTCCEEE-EEGGGTEEEEECTTCCSCEE
T ss_pred CcceeEECCCCCEEEEcC-CCEEEEEeCCCceE-eeeec-CCcCCCcceEECCCCCEEE-EECCCCEEEEEECCCceeEe
Confidence 467899999999666555 88999999865432 22211 1224578999999987544 44567889999765433211
Q ss_pred ------------cc-ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758 83 ------------NV-HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ 149 (198)
Q Consensus 83 ------------~~-~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~ 149 (198)
.. ..+.++++...++.|..||... .............+..++++|+|.++++...++.|.+|+...
T Consensus 144 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 144 LPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES-NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp CCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT-CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC
T ss_pred eccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC-CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC
Confidence 01 1233555556678899999875 222222222336688999999998878777788999999876
Q ss_pred CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccccC
Q psy8758 150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLEH 198 (198)
Q Consensus 150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~~ 198 (198)
..... ....+...+.+++++|+|+++++...++.|+++++...+...|
T Consensus 223 ~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~~~~ 270 (270)
T 1rwi_B 223 TTSTV-LPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHHHH 270 (270)
T ss_dssp SCCEE-CCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGSCCC
T ss_pred Cccee-eccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCccccCC
Confidence 54332 2123335789999999999888888899999999998887765
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.68 E-value=9.9e-15 Score=104.73 Aligned_cols=177 Identities=12% Similarity=0.112 Sum_probs=112.9
Q ss_pred ceeEEEECCCCceEEEeeCC---C--eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecC-----------
Q psy8758 3 HVTHTVWSLDNKFVISASDE---M--NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE----------- 66 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d---~--~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----------- 66 (198)
.+..++|||||++|+..+.+ + .|.+|++.+++.. .+... .. +..+.|+|+++.++++...
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~-~l~~~--~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~ 135 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK-KILEA--KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFED 135 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE-EEEEE--SE-EEEEEECTTSSEEEEEEECCCC--------
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE-EEEcC--CC-ccceeECCCCCEEEEEEccCCCcCCcEEEc
Confidence 46789999999999887653 3 3777788766532 33222 23 8899999999998887532
Q ss_pred ---------------CccEEEEeccCCCC--ccc--------cccCceEEEecCC------C-cEEEEEccCCCcceeee
Q psy8758 67 ---------------DFNLYSYDIRQLNS--PLN--------VHKDMTSAAANED------F-NLYSYDIRQLNSPLNVH 114 (198)
Q Consensus 67 ---------------d~~i~~~d~~~~~~--~~~--------~~~~~~~~~~~~~------~-~i~~~d~~~~~~~~~~~ 114 (198)
...|++||+.+... .+. ..++.+++++..+ . ...+|.+.+ ++ ...+
T Consensus 136 ~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~-~~-~~~l 213 (347)
T 2gop_A 136 DVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKPRFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWED-GK-EEKM 213 (347)
T ss_dssp -CCCC---------CEEEEEEEETTTTEEEEEEEEETTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEET-TE-EEEE
T ss_pred ccceeecCcccccCccceEEEEECCCCeEEeeecCCCcccccCCCCeEEEEEecccccccccccccEEEeCC-Cc-eEEe
Confidence 35688999875432 111 1122244545433 1 334444333 33 3333
Q ss_pred cCCCcceEEEEEccCCCEEEEeecC--------CcEEEEEcCCCceeeEEeccCcccEEE-EEEcCCCCEEEEecCCCeE
Q psy8758 115 KDMTSAVTSVDYSPTGREFVAGGYD--------KSLRLYLAHQGHSRDIYHTKRMQHVTH-TVWSLDNKFVISASDEMNL 185 (198)
Q Consensus 115 ~~~~~~i~~~~~sp~~~~l~~~~~d--------~~v~v~d~~~~~~~~~~~~~~~~~v~~-~~~s~~~~~l~~~~~dg~v 185 (198)
..+ ..+..+ +|+|+.|+..+.+ ..|.+|| +++.... ...+...+.. +.|+ |+ ++++++.++.+
T Consensus 214 ~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l-~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~ 285 (347)
T 2gop_A 214 FEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI-LDEVDRGVGQAKIKD-GK-VYFTLFEEGSV 285 (347)
T ss_dssp EEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES-STTCCSEEEEEEEET-TE-EEEEEEETTEE
T ss_pred ccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEec-cccCCcccCCccEEc-Cc-EEEEEecCCcE
Confidence 333 444444 9999988877644 3677888 5544333 2455667886 9999 88 88888999999
Q ss_pred EEEecCCCc
Q psy8758 186 RVWKAHASE 194 (198)
Q Consensus 186 ~~w~~~~~~ 194 (198)
++| +.+++
T Consensus 286 ~l~-~~~g~ 293 (347)
T 2gop_A 286 NLY-IWDGE 293 (347)
T ss_dssp EEE-EESSS
T ss_pred EEE-EcCCc
Confidence 999 87554
No 177
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.68 E-value=2.8e-14 Score=111.73 Aligned_cols=188 Identities=11% Similarity=0.055 Sum_probs=124.0
Q ss_pred ceeEEEECCCCceEEEeeCCC-----eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCcc--------
Q psy8758 3 HVTHTVWSLDNKFVISASDEM-----NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFN-------- 69 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~-----~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~-------- 69 (198)
.+..++|||||++|+.+..++ .|++||+.+++....... ...+..++|+||++.++.+. .++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~---~~~~~~~~wspDg~~l~~~~-~~~~~~~~~~~~ 201 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE---RVKFSCMAWTHDGKGMFYNA-YPQQDGKSDGTE 201 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE---EECSCCEEECTTSSEEEEEE-CCCCSSCCSSSC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc---CcccceEEEEeCCCEEEEEE-ECCccccccccc
Confidence 367899999999998775433 899999998875442221 22367899999999998875 4433
Q ss_pred --------EEEEeccCCCCc--c--cc--c-----------cCceEEEecC-----CCcEEEEEccC------CCcceee
Q psy8758 70 --------LYSYDIRQLNSP--L--NV--H-----------KDMTSAAANE-----DFNLYSYDIRQ------LNSPLNV 113 (198)
Q Consensus 70 --------i~~~d~~~~~~~--~--~~--~-----------~~~~~~~~~~-----~~~i~~~d~~~------~~~~~~~ 113 (198)
|++|++.+.... + .. + .+..++.... +..|++||+.+ .......
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 999998765411 1 11 1 1122333322 56899999875 2224555
Q ss_pred ecCCCcceEEEEEccCCCEEEEeecC----CcEEEEEcCCCce--eeEEeccCc-ccEEEEEEcCCCCEEEEecCCCe--
Q psy8758 114 HKDMTSAVTSVDYSPTGREFVAGGYD----KSLRLYLAHQGHS--RDIYHTKRM-QHVTHTVWSLDNKFVISASDEMN-- 184 (198)
Q Consensus 114 ~~~~~~~i~~~~~sp~~~~l~~~~~d----~~v~v~d~~~~~~--~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg~-- 184 (198)
+..+...+.. .|+|+|+.|+..+.. ..|.+||+.++.. ...+...+. ..+..++|++++.++++...|+.
T Consensus 282 l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 282 LIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360 (710)
T ss_dssp EECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred eeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence 6556555554 588999977766543 3699999988642 223322322 36888999988888888888875
Q ss_pred EEEEecCCCcc
Q psy8758 185 LRVWKAHASEK 195 (198)
Q Consensus 185 v~~w~~~~~~~ 195 (198)
|++|++.+|+.
T Consensus 361 l~~~~~~~g~~ 371 (710)
T 2xdw_A 361 LQLHDLATGAL 371 (710)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCCE
Confidence 56677756653
No 178
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.67 E-value=1.7e-13 Score=99.53 Aligned_cols=187 Identities=12% Similarity=-0.033 Sum_probs=125.8
Q ss_pred EEEECCCCceEEEee----------CCCeEEEEEccCCceeeeeeee-e----ecCceeeEEeCCCCCeEEEEecC-Ccc
Q psy8758 6 HTVWSLDNKFVISAS----------DEMNLRVWKAHASEKLGPIRKV-V----MSLRSNMVSWNPMEAFVFTAANE-DFN 69 (198)
Q Consensus 6 ~~~~s~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~-~----~~~~v~~~~~~~~~~~~~~~~~~-d~~ 69 (198)
.++++|||++++++. .++.|.+||..+.+....+... . .......+.|+|++++++++... ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 789999999998885 3678999999877665554321 0 01234589999999999987533 578
Q ss_pred EEEEeccCCCCccc-c----------ccCceEEEecCCCcEEEEEccCCCcce---------------------------
Q psy8758 70 LYSYDIRQLNSPLN-V----------HKDMTSAAANEDFNLYSYDIRQLNSPL--------------------------- 111 (198)
Q Consensus 70 i~~~d~~~~~~~~~-~----------~~~~~~~~~~~~~~i~~~d~~~~~~~~--------------------------- 111 (198)
|.++| .+.+.... . .....+++...||.+..+|. + ++..
T Consensus 150 v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~-g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 226 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-A-GGAAGAGLVGAMLTAAQNLLTQPAQANKSGR 226 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-C-CcEEEEEeccccccCCcceeecceeEecCCE
Confidence 99999 76543222 1 11123344556666666655 2 1111
Q ss_pred -----------------------eeecC----------CCcceEEEEEccCCCEEEEeec----------CCcEEEEEcC
Q psy8758 112 -----------------------NVHKD----------MTSAVTSVDYSPTGREFVAGGY----------DKSLRLYLAH 148 (198)
Q Consensus 112 -----------------------~~~~~----------~~~~i~~~~~sp~~~~l~~~~~----------d~~v~v~d~~ 148 (198)
..+.. .+.....++++|+++.+.+... .+.|.++|+.
T Consensus 227 ~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~ 306 (373)
T 2mad_H 227 IVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGL 306 (373)
T ss_pred EEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECC
Confidence 00000 0111233778999887776543 3579999999
Q ss_pred CCceeeEEeccCcccEEEEEEcCCCC-EEEEec-CCCeEEEEecCCCcccc
Q psy8758 149 QGHSRDIYHTKRMQHVTHTVWSLDNK-FVISAS-DEMNLRVWKAHASEKLE 197 (198)
Q Consensus 149 ~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~dg~v~~w~~~~~~~~~ 197 (198)
+++.+..+..+ ....+++|+|||+ +++++. .++.|.++|+.+++.++
T Consensus 307 t~~vv~~i~~g--~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~ 355 (373)
T 2mad_H 307 VGQTSSQISLG--HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQ 355 (373)
T ss_pred CCEEEEEEECC--CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEe
Confidence 99998887544 4688999999999 677766 58999999999988763
No 179
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.67 E-value=6.5e-14 Score=100.10 Aligned_cols=183 Identities=8% Similarity=-0.006 Sum_probs=130.3
Q ss_pred eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--
Q psy8758 4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP-- 81 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~-- 81 (198)
...+.+. +++.+++...++.|.++|..+++....+.. ......+++++++ .++++...++.|.++|..+....
T Consensus 46 ~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~---~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~ 120 (328)
T 3dsm_A 46 AQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG---FTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGY 120 (328)
T ss_dssp EEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC---CSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEE
T ss_pred ceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC---CCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEE
Confidence 3456663 344555555678999999999887666632 3557889999988 56665447899999998764321
Q ss_pred cc---------------cccCceEEEec-CCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecC------
Q psy8758 82 LN---------------VHKDMTSAAAN-EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYD------ 139 (198)
Q Consensus 82 ~~---------------~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d------ 139 (198)
+. ...+.++++.. .++.|.++|+.+ .+.+..+... .....++++|+|++++++..+
T Consensus 121 i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t-~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~ 198 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTET-DKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPY 198 (328)
T ss_dssp EECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTT-TEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSS
T ss_pred EEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCC-CeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCcc
Confidence 11 11123344443 488999999987 5666666542 345789999999987777654
Q ss_pred ----CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 140 ----KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 140 ----~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
+.|.++|..+++....+..........++|+|++++|+++.. .|.+||..+++.
T Consensus 199 ~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 199 GYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp CBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred ccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence 789999999988776664332347899999999998887654 899999988775
No 180
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.67 E-value=1.6e-13 Score=104.46 Aligned_cols=185 Identities=9% Similarity=0.033 Sum_probs=128.4
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEcc--CCceeeeeeeeeecCceeeEEeC----CCCCeEEEEecCCccEEEEecc
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAH--ASEKLGPIRKVVMSLRSNMVSWN----PMEAFVFTAANEDFNLYSYDIR 76 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~--~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~~~~d~~i~~~d~~ 76 (198)
.+..+.|+|||+++++++.|+.|.+||+. +.+....+.. ......++|+ |++++++++...++.+.++|..
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~---G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~ 274 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI---GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGE 274 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC---CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETT
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec---CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECC
Confidence 35689999999999999999999999995 6655544433 3446789999 6999999987778999999977
Q ss_pred CCCCccc------------cc-------------cCceEEEecCCCcEEEEEccCCCcc-eeeecCCCcceEEEEEccCC
Q psy8758 77 QLNSPLN------------VH-------------KDMTSAAANEDFNLYSYDIRQLNSP-LNVHKDMTSAVTSVDYSPTG 130 (198)
Q Consensus 77 ~~~~~~~------------~~-------------~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~i~~~~~sp~~ 130 (198)
+.+.... .| ....++....+|+|.++|....... +..+ ........+.|+|+|
T Consensus 275 t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdg 353 (567)
T 1qks_A 275 TLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSH 353 (567)
T ss_dssp TCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTS
T ss_pred CCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee-eccccccCceECCCC
Confidence 6442110 01 1223445566788888988753211 1122 233456788999999
Q ss_pred CEEEEee-cCCcEEEEEcCCCceeeEEec----cCcccEEEEEEcCCCC-EEEEec-CCCeEEEEecCC
Q psy8758 131 REFVAGG-YDKSLRLYLAHQGHSRDIYHT----KRMQHVTHTVWSLDNK-FVISAS-DEMNLRVWKAHA 192 (198)
Q Consensus 131 ~~l~~~~-~d~~v~v~d~~~~~~~~~~~~----~~~~~v~~~~~s~~~~-~l~~~~-~dg~v~~w~~~~ 192 (198)
+++++++ .++.|.++|+.+++....+.. .|.+.-..+ ++|++. .++++. .++.|.++|..+
T Consensus 354 r~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 354 RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 9876655 578999999999988776644 232212122 588744 445543 568999999987
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.67 E-value=9.8e-14 Score=97.62 Aligned_cols=181 Identities=11% Similarity=0.057 Sum_probs=122.5
Q ss_pred ceeEEEECCCCc-eEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 3 HVTHTVWSLDNK-FVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 3 ~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
...+++|+|+|+ +++++..++.|..|+..++ ...+.. ....+.+++++|+++.+++ ...++.|.+||..+....
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~--~~~~~~~l~~~~dg~l~v~-~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMH--PSHHQNGHCLNKQGHLIAC-SHGLRRLERQREPGGEWE 103 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEES--SCSSEEEEEECTTCCEEEE-ETTTTEEEEECSTTCCEE
T ss_pred cccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEEC--CCCCcceeeECCCCcEEEE-ecCCCeEEEEcCCCCcEE
Confidence 356899999998 7778888899999998766 344432 3456789999999986654 455688999998543311
Q ss_pred -c---------------cc-ccCceEEE----ec-------------CCCcEEEEEccCCCcceeeecCCCcceEEEEEc
Q psy8758 82 -L---------------NV-HKDMTSAA----AN-------------EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYS 127 (198)
Q Consensus 82 -~---------------~~-~~~~~~~~----~~-------------~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~s 127 (198)
+ .. ..+.++++ ++ ..+.|..++.. ..+..+..+......++|+
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~---g~~~~~~~~~~~~~gi~~s 180 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD---GTLSAPIRDRVKPNGLAFL 180 (296)
T ss_dssp EEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT---SCEEEEECCCSSEEEEEEC
T ss_pred EEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC---CCEEEeecCCCCCccEEEC
Confidence 1 00 11223343 22 12344444443 2233444455667899999
Q ss_pred cCCCEEEEeecCCcEEEEEcC-CCce---eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 128 PTGREFVAGGYDKSLRLYLAH-QGHS---RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 128 p~~~~l~~~~~d~~v~v~d~~-~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
|+++.+++.+.++.|.+|++. .++. ...+ ..+...+..++++++|+++++. ++.|.+|+.+ ++.
T Consensus 181 ~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~ 248 (296)
T 3e5z_A 181 PSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDE 248 (296)
T ss_dssp TTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCE
T ss_pred CCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCE
Confidence 999988777778999999997 4544 2333 3344567789999999977666 7889999986 444
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.65 E-value=1.8e-13 Score=107.27 Aligned_cols=190 Identities=12% Similarity=0.017 Sum_probs=127.9
Q ss_pred eeEEEECCCCceEEEeeCCCe----------------EEEEEccCCceeeee--eeeeecCceeeEEeCCCCCeEEEEec
Q psy8758 4 VTHTVWSLDNKFVISASDEMN----------------LRVWKAHASEKLGPI--RKVVMSLRSNMVSWNPMEAFVFTAAN 65 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d~~----------------i~i~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~ 65 (198)
+..++|+|||+.|+.++.++. |++|++.+++....+ ....+...+..+.|+|++++++.+..
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 467999999999998887765 999999876532122 11112344678999999999988653
Q ss_pred C----CccEEEEeccC------C---CCccccc----------c-CceEEEecC---CCcEEEEEccCCCc-ceeeecCC
Q psy8758 66 E----DFNLYSYDIRQ------L---NSPLNVH----------K-DMTSAAANE---DFNLYSYDIRQLNS-PLNVHKDM 117 (198)
Q Consensus 66 ~----d~~i~~~d~~~------~---~~~~~~~----------~-~~~~~~~~~---~~~i~~~d~~~~~~-~~~~~~~~ 117 (198)
. +..+++||+.. . ...+..+ . ..+++.... .+.|.+||+.+... ....+..+
T Consensus 253 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 332 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE 332 (710)
T ss_dssp CSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC
T ss_pred ccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCC
Confidence 2 56899999875 3 1122211 1 123333332 34699999886321 23444444
Q ss_pred Cc--ceEEEEEccCCCEEEEeecCCc--EEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe----cCCCeEEEEe
Q psy8758 118 TS--AVTSVDYSPTGREFVAGGYDKS--LRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA----SDEMNLRVWK 189 (198)
Q Consensus 118 ~~--~i~~~~~sp~~~~l~~~~~d~~--v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~----~~dg~v~~w~ 189 (198)
.. .+..++|++++.++++...++. |.+|++.+++....+ ..+...+..+.++|+++.++.. ...+.++.||
T Consensus 333 ~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l-~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 411 (710)
T 2xdw_A 333 HEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIF-PLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCD 411 (710)
T ss_dssp CSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEE-CCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEE
T ss_pred CCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEec-CCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEE
Confidence 33 6888999987788888888874 666777677765555 3446788999999998765532 2457899999
Q ss_pred cCCCc
Q psy8758 190 AHASE 194 (198)
Q Consensus 190 ~~~~~ 194 (198)
+.+++
T Consensus 412 ~~tg~ 416 (710)
T 2xdw_A 412 LTKEE 416 (710)
T ss_dssp TTSSS
T ss_pred CCCCc
Confidence 98876
No 183
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.65 E-value=2.5e-14 Score=104.11 Aligned_cols=187 Identities=13% Similarity=0.032 Sum_probs=116.5
Q ss_pred eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeE--EeCCCCCeEEEEe------------------
Q psy8758 5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMV--SWNPMEAFVFTAA------------------ 64 (198)
Q Consensus 5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~~------------------ 64 (198)
..++|+|||+.|+.++.++.+++||+.+++....... +...+... .++|+++.++...
T Consensus 84 ~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~--~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
T 3pe7_A 84 FGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV--PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEF 161 (388)
T ss_dssp SSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC--CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred cceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec--hhhcccccceeECCCCCeeccccccCcccccccccchhhhh
Confidence 3678999999999999999999999998875433322 22223223 3489998886431
Q ss_pred ---cCCccEEEEeccCCCCc-c----------cccc--CceEEEecC------CCcEEEEEccCCCcceeeecCCC--cc
Q psy8758 65 ---NEDFNLYSYDIRQLNSP-L----------NVHK--DMTSAAANE------DFNLYSYDIRQLNSPLNVHKDMT--SA 120 (198)
Q Consensus 65 ---~~d~~i~~~d~~~~~~~-~----------~~~~--~~~~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~--~~ 120 (198)
..+..|++||+.+.... + ...+ +..++.... ...|+++|+.. .....+..+. ..
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~--~~~~~l~~~~~~~~ 239 (388)
T 3pe7_A 162 YFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG--TNMRKVKTHAEGES 239 (388)
T ss_dssp GGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS--CCCEESCCCCTTEE
T ss_pred hccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC--CceEEeeeCCCCcc
Confidence 23467999998765321 1 1112 233333333 33678888764 3334444444 35
Q ss_pred eEEEEEccCCCEEEEeec-CC----cEEEEEcCCCceeeEEe-ccCccc---EEEEEEcCCCCEEEEe---------cCC
Q psy8758 121 VTSVDYSPTGREFVAGGY-DK----SLRLYLAHQGHSRDIYH-TKRMQH---VTHTVWSLDNKFVISA---------SDE 182 (198)
Q Consensus 121 i~~~~~sp~~~~l~~~~~-d~----~v~v~d~~~~~~~~~~~-~~~~~~---v~~~~~s~~~~~l~~~---------~~d 182 (198)
+..++|+|||+.|+..+. ++ .|++||+.+++...... .++... ...+.|+|||+.|+.. ..+
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~ 319 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEND 319 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCC
T ss_pred cccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCC
Confidence 778999999997766443 22 39999999987644321 111000 1123799999987753 446
Q ss_pred CeEEEEecCCCcc
Q psy8758 183 MNLRVWKAHASEK 195 (198)
Q Consensus 183 g~v~~w~~~~~~~ 195 (198)
..|++||+.+++.
T Consensus 320 ~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 320 PFLYVFNMKNGTQ 332 (388)
T ss_dssp CEEEEEETTTTEE
T ss_pred CEEEEEeccCCce
Confidence 7899999988764
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.65 E-value=7.6e-15 Score=106.94 Aligned_cols=182 Identities=14% Similarity=0.123 Sum_probs=116.7
Q ss_pred EEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceee-------------------EEeCCCCCeEEEEe--
Q psy8758 6 HTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNM-------------------VSWNPMEAFVFTAA-- 64 (198)
Q Consensus 6 ~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~~~~~-- 64 (198)
.+.|+|||++|+..+.++.|++|++.+++........ ...... +.|+|+++.++...
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~--~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~ 162 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVD--EEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY 162 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC--TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecc--cccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec
Confidence 3789999999999999989999999877643222211 111111 45788887765432
Q ss_pred --cCCccEEEEeccCCCCc-----------ccccc--CceEEEecCC------CcEEEEEccCCCcceeeecCC--Ccce
Q psy8758 65 --NEDFNLYSYDIRQLNSP-----------LNVHK--DMTSAAANED------FNLYSYDIRQLNSPLNVHKDM--TSAV 121 (198)
Q Consensus 65 --~~d~~i~~~d~~~~~~~-----------~~~~~--~~~~~~~~~~------~~i~~~d~~~~~~~~~~~~~~--~~~i 121 (198)
..+..|++||+.+.... ....+ +..++..+.+ ..|++||+.. .. ...+..+ ...+
T Consensus 163 ~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~~~~~~~~~ 240 (396)
T 3c5m_A 163 HTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG-SN-VRKIKEHAEGESC 240 (396)
T ss_dssp HTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS-CC-CEESSCCCTTEEE
T ss_pred cCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCC-Cc-eeEeeccCCCccc
Confidence 35678999998754321 01111 2223333222 4688888865 22 3333332 2357
Q ss_pred EEEEEccCCCEEEEeecC-----CcEEEEEcCCCceeeEEeccCcccEEEEEEcC-CCCEEEEec---------------
Q psy8758 122 TSVDYSPTGREFVAGGYD-----KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSL-DNKFVISAS--------------- 180 (198)
Q Consensus 122 ~~~~~sp~~~~l~~~~~d-----~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~--------------- 180 (198)
..++|+|+|+.|+..+.+ +.|++||+.+++........ ... +.|+| ||+++++++
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~---~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~ 316 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP---PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNI 316 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC---SEE-EEEECSSSSEEEEEECCC----------CC
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC---CCC-CCccCCCCceEEEecCCcceeecccccccc
Confidence 889999999988776543 44999999988765543211 233 89999 999888654
Q ss_pred -CCCeEEEEecCCCcc
Q psy8758 181 -DEMNLRVWKAHASEK 195 (198)
Q Consensus 181 -~dg~v~~w~~~~~~~ 195 (198)
.++.|++||+.+++.
T Consensus 317 ~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 317 ENDPFLYVLNTKAKSA 332 (396)
T ss_dssp CCCCEEEEEETTTTBC
T ss_pred CCCCcEEEEecccCce
Confidence 347899999987764
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.64 E-value=2.3e-13 Score=97.22 Aligned_cols=188 Identities=9% Similarity=-0.008 Sum_probs=125.9
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeee---cCceeeEEeCCCCCeEEEEec-CCccEEEEeccCC
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVM---SLRSNMVSWNPMEAFVFTAAN-EDFNLYSYDIRQL 78 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~-~d~~i~~~d~~~~ 78 (198)
....++++++++.+++...++.|.+||..+++....+..... ......+++ ++..++++.. .++.|.++|..+.
T Consensus 85 ~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~ 162 (328)
T 3dsm_A 85 SPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETD 162 (328)
T ss_dssp SEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTT
T ss_pred CCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCC
Confidence 457889989985444444789999999988875554443110 014567777 4566666654 4889999998754
Q ss_pred CCc-----------ccc-ccCceEEEecCC----------CcEEEEEccCCCcceeeecCC-CcceEEEEEccCCCEEEE
Q psy8758 79 NSP-----------LNV-HKDMTSAAANED----------FNLYSYDIRQLNSPLNVHKDM-TSAVTSVDYSPTGREFVA 135 (198)
Q Consensus 79 ~~~-----------~~~-~~~~~~~~~~~~----------~~i~~~d~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~ 135 (198)
... +.. ..+.+++++..+ +.|.++|..+ .+....+... ......++++|+++.|.+
T Consensus 163 ~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t-~~v~~~~~~~~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 163 KVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET-FTVEKQFKFKLGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp EEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT-TEEEEEEECCTTCCCEEEEECTTSCEEEE
T ss_pred eEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC-CeEEEEEecCCCCCceeEEEecCCCEEEE
Confidence 321 111 123345555443 7899999987 4555555422 236789999999998887
Q ss_pred eecCCcEEEEEcCCCceeeE-EeccCcccEEEEEEcC-CCCEEEEe----cCCCeEEEEecCCCccc
Q psy8758 136 GGYDKSLRLYLAHQGHSRDI-YHTKRMQHVTHTVWSL-DNKFVISA----SDEMNLRVWKAHASEKL 196 (198)
Q Consensus 136 ~~~d~~v~v~d~~~~~~~~~-~~~~~~~~v~~~~~s~-~~~~l~~~----~~dg~v~~w~~~~~~~~ 196 (198)
+.. .|.+||..+++.... +..........++++| +++++++. ..++.|.+||.+ ++.+
T Consensus 242 ~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~ 305 (328)
T 3dsm_A 242 INN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLI 305 (328)
T ss_dssp ESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEE
T ss_pred Ecc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEE
Confidence 765 899999988775321 1121235788999999 55666665 578999999998 7754
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.63 E-value=9.3e-14 Score=96.94 Aligned_cols=175 Identities=7% Similarity=0.026 Sum_probs=126.3
Q ss_pred CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc--------
Q psy8758 12 DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN-------- 83 (198)
Q Consensus 12 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~-------- 83 (198)
.+++|++++.++.|++||.++++.+..+.... ...+.++.+.|+++.++ + .++.+..||. +.+....
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~-~~~~~~~~~~pdG~ilv-s--~~~~V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEK-GWECNSVAATKAGEILF-S--YSKGAKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCT-TCCCCEEEECTTSCEEE-E--CBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCc-cCCCcCeEECCCCCEEE-e--CCCCEEEECC-CCCEEEEEcCCCCcc
Confidence 46889999999999999998998766665421 13578899999998777 3 3566777776 3322111
Q ss_pred ------cccCceEEEecC-CCcEEEEEccCCCcceeeec------CCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCC
Q psy8758 84 ------VHKDMTSAAANE-DFNLYSYDIRQLNSPLNVHK------DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG 150 (198)
Q Consensus 84 ------~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~~------~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~ 150 (198)
...+.++++... ++.+..+|.. ++.+..+. .+......+++.++|+++++...++.|..||.. +
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~~--Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G 155 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNMK--GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G 155 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECTT--SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeCC--CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C
Confidence 112344555555 6667777653 55555543 122345567889999999999999999999998 8
Q ss_pred ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 151 HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 151 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+.+..+... ..+.++...++|+++++++.++.|..+|.++|+.+
T Consensus 156 ~~~w~~~~~--~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 156 QLLNSVKLS--GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIV 199 (276)
T ss_dssp CEEEEEECS--SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEE
T ss_pred CEEEEEECC--CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEE
Confidence 888877432 45566788999999998888889999999988875
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.62 E-value=1.4e-12 Score=93.07 Aligned_cols=183 Identities=8% Similarity=-0.007 Sum_probs=119.3
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC----ccEEEEeccCC
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED----FNLYSYDIRQL 78 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d----~~i~~~d~~~~ 78 (198)
.+.+++|+|+|++++++..++.|.+||..+++...... .....+.+++++|+++.+++. ..+ +.|.+||....
T Consensus 46 ~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~--~~~~~~~~i~~~~dg~l~v~~-~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV--SHKANPAAIKIHKDGRLFVCY-LGDFKSTGGIFAATENGD 122 (333)
T ss_dssp CEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE--CSSSSEEEEEECTTSCEEEEE-CTTSSSCCEEEEECTTSC
T ss_pred cccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee--CCCCCcceEEECCCCcEEEEe-CCCCCCCceEEEEeCCCC
Confidence 35789999999988788888999999998776432221 234668999999999866654 344 58999997654
Q ss_pred CCc--cc--cc-----------cCceEEEecC------CCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEE-Ee
Q psy8758 79 NSP--LN--VH-----------KDMTSAAANE------DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV-AG 136 (198)
Q Consensus 79 ~~~--~~--~~-----------~~~~~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~ 136 (198)
... +. .. .+.++++... .+.|..+|... ..+..+......+..++|+|+++.|+ +.
T Consensus 123 ~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~~dg~~l~v~~ 200 (333)
T 2dg1_A 123 NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF--RTVTPIIQNISVANGIALSTDEKVLWVTE 200 (333)
T ss_dssp SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS--CCEEEEEEEESSEEEEEECTTSSEEEEEE
T ss_pred EEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC--CEEEEeecCCCcccceEECCCCCEEEEEe
Confidence 322 11 00 1123333322 24455555543 22333322334578899999998654 44
Q ss_pred ecCCcEEEEEcCC-CceeeE-----E--eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758 137 GYDKSLRLYLAHQ-GHSRDI-----Y--HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 137 ~~d~~v~v~d~~~-~~~~~~-----~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
..++.|.+||+.+ +..... . ..++ ..+..++++++|+++++...++.|.+||.+
T Consensus 201 ~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 201 TTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp GGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 5678999999964 332211 1 0112 467889999999988877778999999984
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.61 E-value=9.6e-13 Score=92.55 Aligned_cols=189 Identities=6% Similarity=-0.012 Sum_probs=124.0
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee--ecCceeeEEeCCCCCeEEEE---ec------------
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV--MSLRSNMVSWNPMEAFVFTA---AN------------ 65 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~---~~------------ 65 (198)
.+.+++++|+|+++++...++.|.+||..+++......... ....+..++++|+++.+++. |.
T Consensus 70 ~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~ 149 (296)
T 3e5z_A 70 HQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEME 149 (296)
T ss_dssp SEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCC
T ss_pred CcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccccccc
Confidence 47889999999988777677899999997776432222111 12346789999999877642 11
Q ss_pred -CCccEEEEeccCCCCccc----------c-ccCceEEEecCCCcEEEEEccCCCcc---eeeecCCCcceEEEEEccCC
Q psy8758 66 -EDFNLYSYDIRQLNSPLN----------V-HKDMTSAAANEDFNLYSYDIRQLNSP---LNVHKDMTSAVTSVDYSPTG 130 (198)
Q Consensus 66 -~d~~i~~~d~~~~~~~~~----------~-~~~~~~~~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~i~~~~~sp~~ 130 (198)
..+.|+.++.......+. . ..+..+++.+.++.|++|++...+.. ...+..+...+..++++++|
T Consensus 150 ~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G 229 (296)
T 3e5z_A 150 LPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGG 229 (296)
T ss_dssp SSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTS
T ss_pred CCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCC
Confidence 134566666542111111 1 12234477777889999998732333 22333344556789999999
Q ss_pred CEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEE-cCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758 131 REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVW-SLDNKFVISASDEMNLRVWKAHASEKLE 197 (198)
Q Consensus 131 ~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~-s~~~~~l~~~~~dg~v~~w~~~~~~~~~ 197 (198)
+++++. ++.|.+||.. ++.+..+. .+.. +.+++| +|+++.|+.++.+ .+.-++.++++.-.
T Consensus 230 ~l~v~~--~~~v~~~~~~-g~~~~~~~-~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~~~ 291 (296)
T 3e5z_A 230 LIWASA--GDGVHVLTPD-GDELGRVL-TPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGLEH 291 (296)
T ss_dssp CEEEEE--TTEEEEECTT-SCEEEEEE-CSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBCCC
T ss_pred CEEEEc--CCeEEEECCC-CCEEEEEE-CCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEcccccccc
Confidence 977666 7889999986 66655553 3434 889999 6899888877765 56667777766543
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.60 E-value=7.2e-14 Score=109.20 Aligned_cols=170 Identities=11% Similarity=0.027 Sum_probs=105.1
Q ss_pred ceeEEEECCCCceEE-----EeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758 3 HVTHTVWSLDNKFVI-----SASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~-----~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~ 77 (198)
.+..++|||||++|| .|+.+..|++||+.+++.... ... .......++|+||++.++.+. .+.. ..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~-~~~-~~~~~~~~~wspDg~~l~~~~-~d~~------~~ 192 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV-DVI-EGGKYATPKWTPDSKGFYYEW-LPTD------PS 192 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS-CCB-SCCTTCCCEECTTSSEEEEEE-CCCC------TT
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC-ccc-CcccccceEEecCCCEEEEEE-ecCC------CC
Confidence 478899999999998 445567899999998874311 111 111226899999999998864 4332 00
Q ss_pred CCCccccccCceEEEecCCCcEEEEEccCCCc---ceeeecCCCcceEEEEEccCCCEEEEeecCC----cEEEEEcCCC
Q psy8758 78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNS---PLNVHKDMTSAVTSVDYSPTGREFVAGGYDK----SLRLYLAHQG 150 (198)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~----~v~v~d~~~~ 150 (198)
. ... .......|++|++.+... .+.....+...+..+.|||||++|+..+.++ .|++++..++
T Consensus 193 ~--~~~--------~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~ 262 (695)
T 2bkl_A 193 I--KVD--------ERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEK 262 (695)
T ss_dssp S--CGG--------GGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCS
T ss_pred C--ccc--------cCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCC
Confidence 0 000 001123456666554221 2222233456788999999999998877665 6777776665
Q ss_pred ceeeEEeccCcccEEEEEEcCCCCEEEEec---CCCeEEEEecCCCc
Q psy8758 151 HSRDIYHTKRMQHVTHTVWSLDNKFVISAS---DEMNLRVWKAHASE 194 (198)
Q Consensus 151 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~---~dg~v~~w~~~~~~ 194 (198)
+..... .+...+....| ++|++++... .++.|.+||+.+++
T Consensus 263 ~~~~l~--~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 263 DFRLLV--KGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp SCEEEE--ECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred ceEEee--cCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 544433 33345556666 5666444443 35889999998764
No 190
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.60 E-value=5.8e-13 Score=96.42 Aligned_cols=74 Identities=5% Similarity=-0.015 Sum_probs=62.6
Q ss_pred CCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCC--ceeeEEeccCcccEEEEEEcCCC
Q psy8758 96 DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQG--HSRDIYHTKRMQHVTHTVWSLDN 173 (198)
Q Consensus 96 ~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~--~~~~~~~~~~~~~v~~~~~s~~~ 173 (198)
+..|.+||+.+ .+.+..+..+. +..++|+|||++|++++. +.|.+||..++ +.+..+ .........++++|+|
T Consensus 285 ~~~v~viD~~t-~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i-~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 285 AAEIWVMDTKT-KQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI-EGAAEASLQVQFHPVG 359 (361)
T ss_dssp CSEEEEEETTT-TEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE-TTSCSSEEEEEECCCS
T ss_pred CceEEEEECCC-CcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe-ccCCCCcEEEEecCCC
Confidence 34799999998 67888887766 899999999999998887 99999999999 777765 3455778899999998
Q ss_pred C
Q psy8758 174 K 174 (198)
Q Consensus 174 ~ 174 (198)
+
T Consensus 360 ~ 360 (361)
T 2oiz_A 360 G 360 (361)
T ss_dssp C
T ss_pred C
Confidence 6
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.59 E-value=1.5e-12 Score=90.20 Aligned_cols=186 Identities=4% Similarity=-0.065 Sum_probs=122.3
Q ss_pred ceeEEEECCCCceEE-EeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 3 HVTHTVWSLDNKFVI-SASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
...+++++++|++++ +...++.|.+|+..+... ..+. ......+.++++++++..+ ++.. ++.|..||.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~-~~~~-~~~~~~p~~i~~~~~g~l~-v~~~-~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGT-TVLP-FNGLYQPQGLAVDGAGTVY-VTDF-NNRVVTLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC------EECC-CCSCCSCCCEEECTTCCEE-EEET-TTEEEEECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCccc-ceEe-eCCcCCcceeEECCCCCEE-EEcC-CCEEEEEeCCCceEe
Confidence 567899999999776 446788999998755432 1111 1122456889999998844 4444 788999997654321
Q ss_pred cc-------------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758 82 LN-------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH 148 (198)
Q Consensus 82 ~~-------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~ 148 (198)
.. ...+.++++...++.|..|+..+ .............+..++++|+|+++++...++.|.+||..
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS-KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC-CSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCC-ceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecC
Confidence 10 01223455555667788887554 22222122233457889999999977777778899999988
Q ss_pred CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
........ ..+...+..++++++|.++++...++.|.+|+..+..
T Consensus 180 ~~~~~~~~-~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 180 SNNQVVLP-FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp TCCEEECC-CSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred CCceEeec-ccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 76554332 2333578899999999888777778899999987643
No 192
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.58 E-value=8.1e-13 Score=94.74 Aligned_cols=171 Identities=12% Similarity=0.183 Sum_probs=111.0
Q ss_pred eeEEEECCCCceEEEeeCC---------------------------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCC
Q psy8758 4 VTHTVWSLDNKFVISASDE---------------------------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM 56 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d---------------------------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 56 (198)
+..++|+|+|+.|+.++.+ ..|.+||+.+++....+.. . .+..+.|+|+
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~---~-~~~~~~~spd 181 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK---P-RFSSGIWHRD 181 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE---E-TTCEEEEETT
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC---C-CcccccCCCC
Confidence 6789999999988887632 5788999987764344433 2 6789999999
Q ss_pred CCeEEEEecCC---------ccEEEEeccCCCCccc--------cccCceEEEecC--------CCcEEEEEccCCCcce
Q psy8758 57 EAFVFTAANED---------FNLYSYDIRQLNSPLN--------VHKDMTSAAANE--------DFNLYSYDIRQLNSPL 111 (198)
Q Consensus 57 ~~~~~~~~~~d---------~~i~~~d~~~~~~~~~--------~~~~~~~~~~~~--------~~~i~~~d~~~~~~~~ 111 (198)
+ .++++ ..+ ..|+++| ......+. ...+..++..+. ...|++|| + ++..
T Consensus 182 g-~~~~~-~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~ 255 (347)
T 2gop_A 182 K-IVVNV-PHREIIPQYFKFWDIYIWE-DGKEEKMFEKVSFYAVDSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVM 255 (347)
T ss_dssp E-EEEEE-ECCCSSCCSSCCEEEEEEE-TTEEEEEEEEESEEEEEECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEE
T ss_pred e-EEEEE-ecccccccccccccEEEeC-CCceEEeccCcceeeECCCCCEEEEEEccccCCccccceEEEEC--C-CceE
Confidence 9 55554 333 2455555 21111111 112233433332 24677888 3 4444
Q ss_pred eeecCCCcceEE-EEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeE-EEEe
Q psy8758 112 NVHKDMTSAVTS-VDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNL-RVWK 189 (198)
Q Consensus 112 ~~~~~~~~~i~~-~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v-~~w~ 189 (198)
.....+...+.. +.|+ ++ ++++++.++.+++| +.+++..... .+...|.+++|+| .++++++.++.. .+|.
T Consensus 256 ~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~--~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~ 328 (347)
T 2gop_A 256 GILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIA--KGRHWIMGFDVDE--IVVYLKETATRLRELFT 328 (347)
T ss_dssp ESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEE--CSSSEEEEEEESS--SEEEEEECSSSCCEEEE
T ss_pred eccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEe--cCCCeEEeeeeeC--cEEEEEcCCCChHHheE
Confidence 444455677886 9999 88 88899999999999 8866554433 3467899999999 666666666554 6666
Q ss_pred cC
Q psy8758 190 AH 191 (198)
Q Consensus 190 ~~ 191 (198)
++
T Consensus 329 ~~ 330 (347)
T 2gop_A 329 WD 330 (347)
T ss_dssp ES
T ss_pred eC
Confidence 54
No 193
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.58 E-value=5.1e-13 Score=98.05 Aligned_cols=189 Identities=14% Similarity=0.075 Sum_probs=127.3
Q ss_pred EEEECCCCceEEEee----------CCCeEEEEEccCCceeeeeeee--e---ecCceeeEEeCCCCCeEEEEecC-Ccc
Q psy8758 6 HTVWSLDNKFVISAS----------DEMNLRVWKAHASEKLGPIRKV--V---MSLRSNMVSWNPMEAFVFTAANE-DFN 69 (198)
Q Consensus 6 ~~~~s~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~--~---~~~~v~~~~~~~~~~~~~~~~~~-d~~ 69 (198)
.++++|||++++++. .++.|.++|..+.+....+... . .......+.|+|++++++++... ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 789999999888875 3678999999988876665431 0 01235689999999999987533 678
Q ss_pred EEEEeccCCCCc--ccc--------ccCceEEEecCCCcEEEEEccCCCcce----------------------------
Q psy8758 70 LYSYDIRQLNSP--LNV--------HKDMTSAAANEDFNLYSYDIRQLNSPL---------------------------- 111 (198)
Q Consensus 70 i~~~d~~~~~~~--~~~--------~~~~~~~~~~~~~~i~~~d~~~~~~~~---------------------------- 111 (198)
|.+.|+.+.+.. +.. .....+++.+.||++.+.+... ++..
T Consensus 202 VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~-~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~ 280 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFAD-GETKVTNTEVFHTEDELLINHPAFSLRSGRLV 280 (426)
T ss_dssp EEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCT-TCCEEEECCCCSCTTSCBCSCCEECTTTCEEE
T ss_pred EEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCC-CcEEEEeeeeeccCCCceeeEeeecCCCCEEE
Confidence 999999875422 111 1123334445555555555421 1111
Q ss_pred ---------------------eeecC----------CCcceEEEEEccCCCEEEEeec----------CCcEEEEEcCCC
Q psy8758 112 ---------------------NVHKD----------MTSAVTSVDYSPTGREFVAGGY----------DKSLRLYLAHQG 150 (198)
Q Consensus 112 ---------------------~~~~~----------~~~~i~~~~~sp~~~~l~~~~~----------d~~v~v~d~~~~ 150 (198)
..+.. .......++++|+++.+++... ++.|.++|+.+.
T Consensus 281 ~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~ 360 (426)
T 3c75_H 281 WPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG 360 (426)
T ss_dssp EEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC
T ss_pred EEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC
Confidence 00000 0011123788999887666542 357999999999
Q ss_pred ceeeEEeccCcccEEEEEEcCCCC-EEEEec-CCCeEEEEecCCCcccc
Q psy8758 151 HSRDIYHTKRMQHVTHTVWSLDNK-FVISAS-DEMNLRVWKAHASEKLE 197 (198)
Q Consensus 151 ~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~dg~v~~w~~~~~~~~~ 197 (198)
+.+..+..+ ....++.|+|||+ ++++.. .++.|.++|+.+++.++
T Consensus 361 kvv~~I~vg--~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~ 407 (426)
T 3c75_H 361 ERINKIELG--HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELR 407 (426)
T ss_dssp CEEEEEEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred eEEEEEECC--CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEE
Confidence 998887544 3688999999999 787776 58999999999998753
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.58 E-value=1.9e-13 Score=106.91 Aligned_cols=190 Identities=9% Similarity=0.002 Sum_probs=123.6
Q ss_pred eEEEECCCCceEEEeeCCCe-------------EEEEEccCCceee-ee-eeeeecCceeeEEeCCCCCeEEEEecCC--
Q psy8758 5 THTVWSLDNKFVISASDEMN-------------LRVWKAHASEKLG-PI-RKVVMSLRSNMVSWNPMEAFVFTAANED-- 67 (198)
Q Consensus 5 ~~~~~s~~~~~l~~~~~d~~-------------i~i~~~~~~~~~~-~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~d-- 67 (198)
..++|+|||+.|+.++.|.. |++|++.++.... .+ ....+...+..+.|+|++++++++...+
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 57899999999999887765 9999998775321 22 2212334678999999999998765333
Q ss_pred -ccEEEEeccCCC-Ccccc----------ccCceEEEec---CCCcEEEEEccCCCc--ceeeecCC-CcceEEEEEccC
Q psy8758 68 -FNLYSYDIRQLN-SPLNV----------HKDMTSAAAN---EDFNLYSYDIRQLNS--PLNVHKDM-TSAVTSVDYSPT 129 (198)
Q Consensus 68 -~~i~~~d~~~~~-~~~~~----------~~~~~~~~~~---~~~~i~~~d~~~~~~--~~~~~~~~-~~~i~~~~~sp~ 129 (198)
..|++++..... ..+.. +.+.+++... .++.|..||+.+... ....+..+ ...+..++|+ +
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~ 329 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-G 329 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-T
T ss_pred ceEEEEEcCCCCceEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-C
Confidence 267777654322 11111 2223334433 357899999976321 12333333 4457888888 6
Q ss_pred CCEEEEeecCCcEEEEEcC-CCceeeEEeccCcccEEEEEEcCCCCEEEEe----cCCCeEEEEecCCCcc
Q psy8758 130 GREFVAGGYDKSLRLYLAH-QGHSRDIYHTKRMQHVTHTVWSLDNKFVISA----SDEMNLRVWKAHASEK 195 (198)
Q Consensus 130 ~~~l~~~~~d~~v~v~d~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~----~~dg~v~~w~~~~~~~ 195 (198)
+.++++...|+..++|.+. .+.....+.......+..++++|+++.++.. ...+.|++||+.+++.
T Consensus 330 ~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 330 GHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp TEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 7788888889988888665 3444443322335678888999999876632 3457899999988763
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.57 E-value=3e-12 Score=97.60 Aligned_cols=180 Identities=12% Similarity=0.099 Sum_probs=127.1
Q ss_pred CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc--CCCCc--------
Q psy8758 12 DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR--QLNSP-------- 81 (198)
Q Consensus 12 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~--~~~~~-------- 81 (198)
.+.++++...++.|.++|..+++....+.. ...+..+.|+|++++++++ +.++.|.+||+. +....
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~---g~~p~~v~~SpDGr~lyv~-~~dg~V~viD~~~~t~~~v~~i~~G~~ 241 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDT---GYAVHISRLSASGRYLFVI-GRDGKVNMIDLWMKEPTTVAEIKIGSE 241 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEEC---SSCEEEEEECTTSCEEEEE-ETTSEEEEEETTSSSCCEEEEEECCSE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeC---CCCccceEECCCCCEEEEE-cCCCeEEEEECCCCCCcEeEEEecCCC
Confidence 344666667889999999998887666543 3456789999999999876 589999999995 33211
Q ss_pred ---cccc-----cC-ceEEEecCCCcEEEEEccCCCcceeeecCC-----------CcceEEEEEccCCCEE-EEeecCC
Q psy8758 82 ---LNVH-----KD-MTSAAANEDFNLYSYDIRQLNSPLNVHKDM-----------TSAVTSVDYSPTGREF-VAGGYDK 140 (198)
Q Consensus 82 ---~~~~-----~~-~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----------~~~i~~~~~sp~~~~l-~~~~~d~ 140 (198)
+..+ .+ .++++...++++.++|..+ .+++..+... ...+..+..++++..+ +....+|
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t-~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET-LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT-CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCC-CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 1112 23 3455556678999999887 5666655421 1257788889987654 4455679
Q ss_pred cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCCCccc
Q psy8758 141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKL 196 (198)
Q Consensus 141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~~~~ 196 (198)
.|.++|....+...............+.|+|+|++++++ ..++.|.++|+.+++.+
T Consensus 321 ~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~ 377 (567)
T 1qks_A 321 KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLV 377 (567)
T ss_dssp EEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEE
T ss_pred eEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEE
Confidence 999999987654333322333567788999999987655 46789999999998764
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.56 E-value=1.2e-11 Score=86.62 Aligned_cols=185 Identities=5% Similarity=-0.074 Sum_probs=126.3
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL 82 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 82 (198)
.+.+++++++|+.+++...++.|.+||.. ++ ...+........+..+++++++...++ ...++.|..||.......+
T Consensus 16 ~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~-~~~~~~i~~~~~~g~~~~~ 92 (299)
T 2z2n_A 16 GPYGITVSDKGKVWITQHKANMISCINLD-GK-ITEYPLPTPDAKVMCLTISSDGEVWFT-ENAANKIGRITKKGIIKEY 92 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-CC-EEEEECSSTTCCEEEEEECTTSCEEEE-ETTTTEEEEECTTSCEEEE
T ss_pred CccceEECCCCCEEEEecCCCcEEEEcCC-CC-eEEecCCcccCceeeEEECCCCCEEEe-CCCCCeEEEECCCCcEEEE
Confidence 57899999999977776667899999987 44 222221112456789999999886655 3457788888865221111
Q ss_pred c------------c-ccCceEEEecCCCcEEEEEccCCCccee-eecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758 83 N------------V-HKDMTSAAANEDFNLYSYDIRQLNSPLN-VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH 148 (198)
Q Consensus 83 ~------------~-~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~ 148 (198)
. . ..+.+.++...++.|..||. + +.... ........+..++++|+|+.+++...++.|..||.
T Consensus 93 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~- 169 (299)
T 2z2n_A 93 TLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-D-GKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE- 169 (299)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred eCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-C-CCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-
Confidence 1 0 12234555556778888887 3 23222 22234456899999999988887777889999999
Q ss_pred CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
+++............+..++++++|+++++...++.|.+||. +++
T Consensus 170 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~ 214 (299)
T 2z2n_A 170 SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE 214 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc
Confidence 666544322333456889999999998777767889999998 654
No 197
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.55 E-value=8e-12 Score=89.15 Aligned_cols=177 Identities=10% Similarity=0.054 Sum_probs=113.9
Q ss_pred ceeEEEECCCCceEEEeeCC----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecC------CccEEE
Q psy8758 3 HVTHTVWSLDNKFVISASDE----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE------DFNLYS 72 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~------d~~i~~ 72 (198)
.+.+++++|+|+++++...+ +.|.+||..++.....+........+..++++|++..+++. .. .+.|+.
T Consensus 88 ~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~-~~~~~~~~~~~l~~ 166 (333)
T 2dg1_A 88 NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTD-FRGYSTNPLGGVYY 166 (333)
T ss_dssp SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEE-CCCBTTBCCEEEEE
T ss_pred CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEe-ccccccCCCceEEE
Confidence 57899999999987776665 68999998776543222211233467899999999876654 22 356777
Q ss_pred EeccCCCC-cc----------ccc-cC-ceEEEecCCCcEEEEEccCCCcceee--------ecCCCcceEEEEEccCCC
Q psy8758 73 YDIRQLNS-PL----------NVH-KD-MTSAAANEDFNLYSYDIRQLNSPLNV--------HKDMTSAVTSVDYSPTGR 131 (198)
Q Consensus 73 ~d~~~~~~-~~----------~~~-~~-~~~~~~~~~~~i~~~d~~~~~~~~~~--------~~~~~~~i~~~~~sp~~~ 131 (198)
+|...... .+ ... .+ .++++...++.|.+||+...+..+.. +..+ ..+..++++++|+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~ 245 (333)
T 2dg1_A 167 VSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDN 245 (333)
T ss_dssp ECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCC
T ss_pred EeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCC
Confidence 76553221 11 011 12 24455566789999998642332221 1111 3578899999999
Q ss_pred EEEEeecCCcEEEEEcCCCceeeEEeccC-----cccEEEEEEcCCCCEEEEecCC
Q psy8758 132 EFVAGGYDKSLRLYLAHQGHSRDIYHTKR-----MQHVTHTVWSLDNKFVISASDE 182 (198)
Q Consensus 132 ~l~~~~~d~~v~v~d~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~d 182 (198)
++++...++.|.+||.. ++....+.... ...+.+++|+||++.|+.++.+
T Consensus 246 l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 246 LYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 88888778999999984 55555442221 1268899999998766654443
No 198
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.53 E-value=2.6e-12 Score=92.81 Aligned_cols=189 Identities=9% Similarity=-0.044 Sum_probs=122.3
Q ss_pred EEEECCCCceEEEee----------CCCeEEEEEccCCceeeeeeeee-----ecCceeeEEeCCCCCeEEEEecC-Ccc
Q psy8758 6 HTVWSLDNKFVISAS----------DEMNLRVWKAHASEKLGPIRKVV-----MSLRSNMVSWNPMEAFVFTAANE-DFN 69 (198)
Q Consensus 6 ~~~~s~~~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~~~~~~-d~~ 69 (198)
.+.++||+++++++. .++.|.+||+.+++....+.... .......+.++||+++++++... +..
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 689999999988886 36789999999998777765320 01235689999999999987433 456
Q ss_pred EEE--EeccCCCCcc--------ccccCceEEEecCCCcEEEEEccC----CCc--------------------------
Q psy8758 70 LYS--YDIRQLNSPL--------NVHKDMTSAAANEDFNLYSYDIRQ----LNS-------------------------- 109 (198)
Q Consensus 70 i~~--~d~~~~~~~~--------~~~~~~~~~~~~~~~~i~~~d~~~----~~~-------------------------- 109 (198)
+.+ +|..+ ...+ .......+++.+.|+++...|+.. .++
T Consensus 149 v~V~~iD~~t-v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~ 227 (368)
T 1mda_H 149 AGLSVPGASD-DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVW 227 (368)
T ss_dssp EEEEETTTEE-EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEE
T ss_pred EEEEEEchhh-ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEE
Confidence 888 88854 1111 111112333444455544444432 000
Q ss_pred -----------------ceeeecC----------CCcceEEEEEccCCCEEEEeec---------CCcEEEEEcCCCcee
Q psy8758 110 -----------------PLNVHKD----------MTSAVTSVDYSPTGREFVAGGY---------DKSLRLYLAHQGHSR 153 (198)
Q Consensus 110 -----------------~~~~~~~----------~~~~i~~~~~sp~~~~l~~~~~---------d~~v~v~d~~~~~~~ 153 (198)
.+..+.- .+.....++++|+++.+..+.. ++.+.++|+.+.+.+
T Consensus 228 vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv 307 (368)
T 1mda_H 228 AVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTS 307 (368)
T ss_dssp CBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEE
T ss_pred EcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEE
Confidence 0000100 0011122789999987776533 235669999999887
Q ss_pred eEEeccCcccEEEEEEcCCCC-EEEEec-CCCeEEEEecCCCcccc
Q psy8758 154 DIYHTKRMQHVTHTVWSLDNK-FVISAS-DEMNLRVWKAHASEKLE 197 (198)
Q Consensus 154 ~~~~~~~~~~v~~~~~s~~~~-~l~~~~-~dg~v~~w~~~~~~~~~ 197 (198)
..+..+ .....++|+|||+ .+++.. .++.|.++|+.+++.++
T Consensus 308 ~~i~vg--~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~ 351 (368)
T 1mda_H 308 GPISNG--HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQS 351 (368)
T ss_dssp ECCEEE--EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEE
T ss_pred EEEECC--CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEE
Confidence 776444 3688999999998 455666 59999999999988753
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.52 E-value=5.2e-11 Score=83.37 Aligned_cols=182 Identities=5% Similarity=-0.074 Sum_probs=123.0
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL 82 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 82 (198)
.+.+++++++|+++++...++.|..|+.. ++ ...+........+..+++.|++...++ ...++.|..+|.......+
T Consensus 58 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~-~~~~~~i~~~d~~g~~~~~ 134 (299)
T 2z2n_A 58 KVMCLTISSDGEVWFTENAANKIGRITKK-GI-IKEYTLPNPDSAPYGITEGPNGDIWFT-EMNGNRIGRITDDGKIREY 134 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEEECSSTTCCEEEEEECTTSCEEEE-ETTTTEEEEECTTCCEEEE
T ss_pred ceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-EEEEeCCCcCCCceeeEECCCCCEEEE-ecCCceEEEECCCCCEEEe
Confidence 47789999999988777668889999975 33 222221112346788999998876654 4467889889873211111
Q ss_pred c------------c-ccCceEEEecCCCcEEEEEccCCCcceee-ecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758 83 N------------V-HKDMTSAAANEDFNLYSYDIRQLNSPLNV-HKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH 148 (198)
Q Consensus 83 ~------------~-~~~~~~~~~~~~~~i~~~d~~~~~~~~~~-~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~ 148 (198)
. . ..+.+.++...++.|..+|. + ++.... .......+..++++|+|+++++...++.|.+||.
T Consensus 135 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~- 211 (299)
T 2z2n_A 135 ELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-S-GDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT- 211 (299)
T ss_dssp ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T-CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred cCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C-CcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-
Confidence 0 0 12234555556678888888 4 333322 2334456889999999998777777889999999
Q ss_pred CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758 149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA 190 (198)
Q Consensus 149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~ 190 (198)
+++........+...+.+++++++|+++++...++.|..||.
T Consensus 212 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 212 SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 666443322334467899999999997777667788999997
No 200
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.52 E-value=4.3e-11 Score=83.44 Aligned_cols=170 Identities=9% Similarity=0.000 Sum_probs=123.8
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC---
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN--- 79 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~--- 79 (198)
.+.+++++|+|++++ +.++.|..||. +++.+..+... ....+.++.+.|+++.+++.+..++.+..+|.....
T Consensus 38 ~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~-~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~ 113 (276)
T 3no2_A 38 ECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAP-AGCEMQTARILPDGNALVAWCGHPSTILEVNMKGEVLSK 113 (276)
T ss_dssp CCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECC-TTCEEEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEE
T ss_pred CCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCC-CCccccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEE
Confidence 478899999999888 34678999998 78766666542 123577889999999988754326666666642110
Q ss_pred --------Ccc-------ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758 80 --------SPL-------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRL 144 (198)
Q Consensus 80 --------~~~-------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v 144 (198)
... ....+.++++...++.|..||.. ++.+..+... ..+.++...|+|+.++++..++.|..
T Consensus 114 ~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~--G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~ 190 (276)
T 3no2_A 114 TEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN--GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQ 190 (276)
T ss_dssp EEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT--SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEE
T ss_pred EeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC--CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEE
Confidence 000 11234578888899999999987 5777777653 34567788899999999988889999
Q ss_pred EEcCCCceeeEEecc-----CcccEEEEEEcCCCCEEEEe
Q psy8758 145 YLAHQGHSRDIYHTK-----RMQHVTHTVWSLDNKFVISA 179 (198)
Q Consensus 145 ~d~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~~~ 179 (198)
+|..+++.+..+... ....+..+...++|.++++.
T Consensus 191 ~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 191 LNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp ECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 999999998887422 11347888899999988876
No 201
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.50 E-value=7.6e-14 Score=101.30 Aligned_cols=172 Identities=9% Similarity=0.015 Sum_probs=100.0
Q ss_pred CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc--cc----
Q psy8758 12 DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN--VH---- 85 (198)
Q Consensus 12 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~--~~---- 85 (198)
++..+++++.|+.|+.||..+++....+.. ..+.+..+.+++..+++ ++.|+.++.||..+.+.... .+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~----~~~~s~p~~~~g~~~v~-~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE----DPVLQVPTHVEEPAFLP-DPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC----CCSCCCC-----CCEEE-CTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC----CCceecceEcCCCEEEE-eCCCCEEEEEECCCCceeeeeeccCccc
Confidence 577899999999999999999987655543 34444455566655554 56899999999865443211 00
Q ss_pred --------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEe
Q psy8758 86 --------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYH 157 (198)
Q Consensus 86 --------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~ 157 (198)
.+..+++++.++.++.||.++ ++.+..+..+. ...++|++..+++++.|+.|+.||.++++.+..+.
T Consensus 83 ~~~sp~~~~~~~v~~g~~dg~v~a~D~~t-G~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 83 VQASPCRSSDGILYMGKKQDIWYVIDLLT-GEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp HTTCSCC-----CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred cccCceEecCCEEEEEeCCCEEEEEECCC-CcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 233566778899999999998 66666665433 24567788899999999999999999998776652
Q ss_pred ccCcccEEEEEEcCCC---CEEEEecCCCeEEEEecCCCccc
Q psy8758 158 TKRMQHVTHTVWSLDN---KFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 158 ~~~~~~v~~~~~s~~~---~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
.. ......++++. ..+++++.||.++.||.++|+.+
T Consensus 158 ~~---~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 158 YF---DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp EE---EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred cc---cccCccccCCccccceEEEECCCCEEEEEECCCCcEE
Confidence 21 12233344432 45667888999999999999865
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.50 E-value=5.4e-11 Score=87.46 Aligned_cols=185 Identities=8% Similarity=-0.017 Sum_probs=121.3
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc--cEEEEeccCCCC
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF--NLYSYDIRQLNS 80 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~--~i~~~d~~~~~~ 80 (198)
....++|+++++++++...++.|++||..++........ ..... ++|+|+++.++++. .++ .|..++......
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~---~~~~~-ia~~~~g~~l~~~d-~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG---FKGGK-PAVTKDKQRVYSIG-WEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET---CCBCB-CEECTTSSEEEEEB-SSTTCEEEEEEGGGTTC
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc---CCCCc-eeEecCCCcEEEEe-cCCCceEEEEEcCCCce
Confidence 467899999999777777778999999977654333222 22234 99999999888764 433 788888654322
Q ss_pred --cc--------------cccc-CceEEEecCCCcEEEEEccCCCcceeee-----cCCCcce-E-EEEEccC-CCEEEE
Q psy8758 81 --PL--------------NVHK-DMTSAAANEDFNLYSYDIRQLNSPLNVH-----KDMTSAV-T-SVDYSPT-GREFVA 135 (198)
Q Consensus 81 --~~--------------~~~~-~~~~~~~~~~~~i~~~d~~~~~~~~~~~-----~~~~~~i-~-~~~~sp~-~~~l~~ 135 (198)
.+ ..+. +..++.+..++.|+.||.... . ...+ .+....- . .++|+|+ +.++++
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~-~-~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQ-E-VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTC-C-EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCC-C-EEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 11 1112 233444666788999998762 2 2222 1111112 3 8999995 556666
Q ss_pred eecCCcEEEEEcCCCceeeEEecc-------------CcccEEEEEEcCCCCEEEEec-CCCeEEEEecCCCcc
Q psy8758 136 GGYDKSLRLYLAHQGHSRDIYHTK-------------RMQHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEK 195 (198)
Q Consensus 136 ~~~d~~v~v~d~~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~~~~-~dg~v~~w~~~~~~~ 195 (198)
-..++.|+.|+.... .....-.. .-.....++++|+|+++++-. .++.|+.|++.+++.
T Consensus 285 d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 285 DQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp ETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred eCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence 667889999997654 22221110 013478999999999877777 889999999777653
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=1.1e-11 Score=97.70 Aligned_cols=182 Identities=6% Similarity=-0.035 Sum_probs=116.1
Q ss_pred ceeEEEECCCCceEEEeeCC-----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc---------
Q psy8758 3 HVTHTVWSLDNKFVISASDE-----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF--------- 68 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~--------- 68 (198)
.+..++|||||++|+.+..+ ..|++||+.+++..... .....+..++|+|| +.++.+.....
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~---~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE---LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE---EEEEESCCCEESTT-SEEEEEECCCC--------C
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc---CCCceeccEEEECC-CEEEEEEecCcccccccccC
Confidence 46789999999999877543 46999999988754321 11222357899999 98888753222
Q ss_pred ----cEEEEeccCCCC----cccc-------------ccCceEEEecC-----CCcEEEEEccCCCcc-eeeecCCCcce
Q psy8758 69 ----NLYSYDIRQLNS----PLNV-------------HKDMTSAAANE-----DFNLYSYDIRQLNSP-LNVHKDMTSAV 121 (198)
Q Consensus 69 ----~i~~~d~~~~~~----~~~~-------------~~~~~~~~~~~-----~~~i~~~d~~~~~~~-~~~~~~~~~~i 121 (198)
.|++|++.+... .+.. ..+..++.... ...|++||+.+.... ...+..+....
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~ 319 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQ 319 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSC
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCce
Confidence 388999865431 1111 11123333332 347999999863113 45555555445
Q ss_pred EEEEEccCCCEEEEeec----CCcEEEEEcCCC--ceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758 122 TSVDYSPTGREFVAGGY----DKSLRLYLAHQG--HSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 122 ~~~~~sp~~~~l~~~~~----d~~v~v~d~~~~--~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
... ++|+|+.|+..+. ++.|.+||+.++ .....+ ..+...+..++|+ ++.++++...|+..++|.++
T Consensus 320 ~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 320 WDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred EEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 444 3589998877765 345999999875 333333 4555567778887 56677888888887777554
No 204
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=7.9e-12 Score=98.43 Aligned_cols=188 Identities=7% Similarity=-0.001 Sum_probs=119.7
Q ss_pred eEEEECCCCceEEEeeCCCe--------------EEEEEccCCceeee-eeee-eecCceeeEEeCCCCCeEEEEecC--
Q psy8758 5 THTVWSLDNKFVISASDEMN--------------LRVWKAHASEKLGP-IRKV-VMSLRSNMVSWNPMEAFVFTAANE-- 66 (198)
Q Consensus 5 ~~~~~s~~~~~l~~~~~d~~--------------i~i~~~~~~~~~~~-~~~~-~~~~~v~~~~~~~~~~~~~~~~~~-- 66 (198)
..++|+|| +.|+.++.++. |++|++.++..... +... .+...+..+.|+|+|++++.+...
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT 290 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence 57899999 98888776543 88899876653211 2111 122247889999999998887532
Q ss_pred --CccEEEEeccCC--C--Cccccc----------cCceEEEecC----CCcEEEEEccCCC-cceeeecCCCcceEEEE
Q psy8758 67 --DFNLYSYDIRQL--N--SPLNVH----------KDMTSAAANE----DFNLYSYDIRQLN-SPLNVHKDMTSAVTSVD 125 (198)
Q Consensus 67 --d~~i~~~d~~~~--~--~~~~~~----------~~~~~~~~~~----~~~i~~~d~~~~~-~~~~~~~~~~~~i~~~~ 125 (198)
...|++||+.+. . ..+..+ .+..++..+. ++.|..||+.... .....+..+...+..++
T Consensus 291 ~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~ 370 (741)
T 1yr2_A 291 DPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVG 370 (741)
T ss_dssp CSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEE
T ss_pred CCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEE
Confidence 347999998654 2 222211 2223333333 4569999987631 23334444455566777
Q ss_pred EccCCCEEEEeecCCcEEEEEcC-CCceeeEEeccCcccEEEEEEcCCCCEEEE----ecCCCeEEEEecCCCc
Q psy8758 126 YSPTGREFVAGGYDKSLRLYLAH-QGHSRDIYHTKRMQHVTHTVWSLDNKFVIS----ASDEMNLRVWKAHASE 194 (198)
Q Consensus 126 ~sp~~~~l~~~~~d~~v~v~d~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~----~~~dg~v~~w~~~~~~ 194 (198)
++ ++.++++...|+..++|.+. .+.....+...+...+..+.++|+++.|+. ....+.|++||+.+++
T Consensus 371 ~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 371 IA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 77 55677788888887777554 344444442234567899999999886552 2345789999998876
No 205
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.49 E-value=1.1e-11 Score=89.74 Aligned_cols=190 Identities=11% Similarity=-0.038 Sum_probs=117.5
Q ss_pred eeEEEECCCCceEEEeeC--CCeEEEEEccCCceeeeeeeeee-----cCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758 4 VTHTVWSLDNKFVISASD--EMNLRVWKAHASEKLGPIRKVVM-----SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR 76 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~ 76 (198)
-..++|+|||++++++.. ++.|.++|+.+++....+..... .+.-.-+..++||+.+++.....+.+.. .+
T Consensus 139 P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~--~~ 216 (386)
T 3sjl_D 139 PWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEI--TH 216 (386)
T ss_dssp GGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEE--EE
T ss_pred CceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEE--ee
Confidence 346899999999888863 68999999999887666643110 0000112445555554443222233311 11
Q ss_pred CCC-----Ccccc-----ccCceEEEecCCCcEEEEEccCCC-cceeeec----------CCCcceEEEEEccCCCEEEE
Q psy8758 77 QLN-----SPLNV-----HKDMTSAAANEDFNLYSYDIRQLN-SPLNVHK----------DMTSAVTSVDYSPTGREFVA 135 (198)
Q Consensus 77 ~~~-----~~~~~-----~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~~----------~~~~~i~~~~~sp~~~~l~~ 135 (198)
+.. ..+.. .....++..+.++.+++.|+.... +....+. -.......++++|+++.++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV 296 (386)
T 3sjl_D 217 TEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYL 296 (386)
T ss_dssp CCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEE
T ss_pred cceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEE
Confidence 100 00000 012223345557899999987521 1222221 01233456888999887777
Q ss_pred eec----------CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCC-EEEE-ecCCCeEEEEecCCCcccc
Q psy8758 136 GGY----------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNK-FVIS-ASDEMNLRVWKAHASEKLE 197 (198)
Q Consensus 136 ~~~----------d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~-~~~dg~v~~w~~~~~~~~~ 197 (198)
... .+.|.++|+.+++.+..+..+ ..+++++++||++ +|++ ...++.|.++|..+++.++
T Consensus 297 ~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg--~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~ 368 (386)
T 3sjl_D 297 LVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG--HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELR 368 (386)
T ss_dssp EEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE--EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EeccccccccCCCCCEEEEEECCCCeEEEEEECC--CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEE
Confidence 543 257999999999998888655 4788999999997 6655 4568999999999998763
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.49 E-value=2e-11 Score=86.23 Aligned_cols=162 Identities=9% Similarity=0.111 Sum_probs=108.8
Q ss_pred ceeEEEECCCCceEEEeeCC---------------CeEEEEEccCCceeeeeeeeeecCceeeEEeC----CCCCeEEEE
Q psy8758 3 HVTHTVWSLDNKFVISASDE---------------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWN----PMEAFVFTA 63 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d---------------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~~~~ 63 (198)
.+.+++++++|+++++...+ +.|..++.. ++. ..+.. .......++|+ |+++.++++
T Consensus 118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~--~~~~~~~i~~~~~~d~dg~~l~v~ 193 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQM-IQVDT--AFQFPNGIAVRHMNDGRPYQLIVA 193 (314)
T ss_dssp CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCE-EEEEE--EESSEEEEEEEECTTSCEEEEEEE
T ss_pred CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCE-EEecc--CCCCcceEEEecccCCCCCEEEEE
Confidence 47899999999877766554 456666654 432 22211 22345788999 998877776
Q ss_pred ecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCC-cceEEEEEccCCCEEEEeecCCcE
Q psy8758 64 ANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMT-SAVTSVDYSPTGREFVAGGYDKSL 142 (198)
Q Consensus 64 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~i~~~~~sp~~~~l~~~~~d~~v 142 (198)
...++.|.+||.... +.+.- ......+..+. ..+..++++++|+++++...++.|
T Consensus 194 ~~~~~~i~~~~~~~~------------------g~~~~------~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i 249 (314)
T 1pjx_A 194 ETPTKKLWSYDIKGP------------------AKIEN------KKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI 249 (314)
T ss_dssp ETTTTEEEEEEEEET------------------TEEEE------EEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEE
T ss_pred ECCCCeEEEEECCCC------------------Ccccc------ceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence 556788888886521 00000 01112222232 456789999999988888788899
Q ss_pred EEEEcCCCceeeEEeccCcccEEEEEEcCCCCE-EEEecCCCeEEEEecCCC
Q psy8758 143 RLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKF-VISASDEMNLRVWKAHAS 193 (198)
Q Consensus 143 ~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~~dg~v~~w~~~~~ 193 (198)
.+||..+++....+ ..+...+.+++|+|+++. +++...++.|..|++...
T Consensus 250 ~~~d~~~g~~~~~~-~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 250 EVFGPDGGQPKMRI-RCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEECTTCBSCSEEE-ECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEcCCCCcEeEEE-eCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 99999877665555 334467899999999994 455566789999998753
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.44 E-value=4e-10 Score=78.90 Aligned_cols=185 Identities=6% Similarity=-0.077 Sum_probs=123.1
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL 82 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 82 (198)
.+.+++++++|+..++...++.|.+|+.. ++. ..+........+..+++.+++...++ ...++.|..+|.......+
T Consensus 21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~-~~~~~~~~~~~~~~i~~~~~g~l~v~-~~~~~~v~~~d~~g~~~~~ 97 (300)
T 2qc5_A 21 GPYGITSSEDGKVWFTQHKANKISSLDQS-GRI-KEFEVPTPDAKVMCLIVSSLGDIWFT-ENGANKIGKLSKKGGFTEY 97 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEE-ETTTTEEEEECTTSCEEEE
T ss_pred CcceeeECCCCCEEEEcCCCCeEEEECCC-Cce-EEEECCCCCCcceeEEECCCCCEEEE-ecCCCeEEEECCCCCeEEe
Confidence 56789999999987777678899999986 442 22221112346788999998876654 4457789888876221111
Q ss_pred cc-------------ccCceEEEecCCCcEEEEEccCCCcce-eeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758 83 NV-------------HKDMTSAAANEDFNLYSYDIRQLNSPL-NVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH 148 (198)
Q Consensus 83 ~~-------------~~~~~~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~ 148 (198)
.. ..+.+.++...++.|..+|... +.. ..+......+..++++|+|+++++...++.|..+|.
T Consensus 98 ~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~- 174 (300)
T 2qc5_A 98 PLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADG--TIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN- 174 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTS--CEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred cCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCC--CEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-
Confidence 10 1223444445567787887752 222 222323456889999999997777766788999998
Q ss_pred CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
+++........+...+..++++++|+++++....+.|.+|+. +++
T Consensus 175 ~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 219 (300)
T 2qc5_A 175 TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE 219 (300)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc
Confidence 555544322234457899999999988777767788999998 443
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.44 E-value=1.5e-10 Score=81.56 Aligned_cols=184 Identities=11% Similarity=0.120 Sum_probs=113.5
Q ss_pred eEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc-c
Q psy8758 5 THTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP-L 82 (198)
Q Consensus 5 ~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~-~ 82 (198)
.+..|+|++ .++++...++.|+.||..+++. .. ......+.+++++|+++.++. . +..|..||..+.... +
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~---~~~~~~~~~i~~~~dG~l~v~-~--~~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QR---VTMDAPVSSVALRQSGGYVAT-I--GTKFCALNWKEQSAVVL 88 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EE---EECSSCEEEEEEBTTSSEEEE-E--TTEEEEEETTTTEEEEE
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EE---EeCCCceEEEEECCCCCEEEE-E--CCeEEEEECCCCcEEEE
Confidence 467899955 4556666788999999987653 22 223567889999999995543 2 567888987643211 1
Q ss_pred ccc------cCceEEEecCCCcE-------------------EEEEccCCCcceeeecCCCcceEEEEEccCCCEEE-Ee
Q psy8758 83 NVH------KDMTSAAANEDFNL-------------------YSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFV-AG 136 (198)
Q Consensus 83 ~~~------~~~~~~~~~~~~~i-------------------~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~-~~ 136 (198)
... ....-+..+.+|.+ .+|.+...+.. ..+.......+.++|+|+++.|+ +.
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~~~~~~~pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHV-KKYFDQVDISNGLDWSLDHKIFYYID 167 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCE-EEEEEEESBEEEEEECTTSCEEEEEE
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCE-EEEeeccccccceEEcCCCCEEEEec
Confidence 000 00011112223332 33333321222 22222234467899999998765 45
Q ss_pred ecCCcEEEEEc--CCCcee--eEE--eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 137 GYDKSLRLYLA--HQGHSR--DIY--HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 137 ~~d~~v~v~d~--~~~~~~--~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+.++.|.+|++ .++... ..+ ...+......++++++|++.++...++.|..||.++|+.+
T Consensus 168 ~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~ 233 (297)
T 3g4e_A 168 SLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRL 233 (297)
T ss_dssp GGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEE
T ss_pred CCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEE
Confidence 56789999997 455432 112 1223356789999999998887777889999999988764
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.42 E-value=8.5e-10 Score=77.20 Aligned_cols=182 Identities=4% Similarity=-0.105 Sum_probs=121.1
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL 82 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 82 (198)
.+.++++.++|++.++...++.|..+|.. ++. ..+........+..+++.+++...++ ...++.|..+|.......+
T Consensus 63 ~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~-~~~~~~i~~~~~~g~~~~~ 139 (300)
T 2qc5_A 63 KVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFT-QLNGDRIGKLTADGTIYEY 139 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECSTTCEEEE-ETTTTEEEEECTTSCEEEE
T ss_pred cceeEEECCCCCEEEEecCCCeEEEECCC-CCe-EEecCCCCCCCCccceECCCCCEEEE-ccCCCeEEEECCCCCEEEc
Confidence 57789999999877776667889999986 543 22222112355789999998876654 4457788888865221111
Q ss_pred c-------------cccCceEEEecCCCcEEEEEccCCCccee-eecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758 83 N-------------VHKDMTSAAANEDFNLYSYDIRQLNSPLN-VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAH 148 (198)
Q Consensus 83 ~-------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~ 148 (198)
. ...+.+.++...++.|..+|.. ++... ........+..++++++|++.++....+.|.+||.
T Consensus 140 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~- 216 (300)
T 2qc5_A 140 DLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNT--GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT- 216 (300)
T ss_dssp ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT--CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred cCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCC--CcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-
Confidence 0 0122344455556778888873 33322 12233456889999999987777777788999998
Q ss_pred CCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758 149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKA 190 (198)
Q Consensus 149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~ 190 (198)
+++........+...+.+++++++|+++++...++.|..++.
T Consensus 217 ~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 217 TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 555444322334467899999999997777666789999987
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.42 E-value=3.2e-10 Score=80.01 Aligned_cols=187 Identities=8% Similarity=0.031 Sum_probs=116.8
Q ss_pred ceeEEEECCCCceEEE-------eeCCCeEEEEEccCCceeeeeeee---eecCceeeEEeCCC-CCeEEEEecCCccEE
Q psy8758 3 HVTHTVWSLDNKFVIS-------ASDEMNLRVWKAHASEKLGPIRKV---VMSLRSNMVSWNPM-EAFVFTAANEDFNLY 71 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~-------~~~d~~i~i~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~-~~~~~~~~~~d~~i~ 71 (198)
...+++|+++|+++++ ...++.|.+||..+++.. .+... .+...+..++++++ +..+++ . ....|.
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v~-~-~~~~l~ 95 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFVA-D-MRLGLL 95 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSEEEEE-E-TTTEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCcEEEE-E-CCCCEE
Confidence 3568999999988877 577889999998777642 22210 02345789999999 654443 3 344788
Q ss_pred EEeccCCCC-cc-c----c------------ccCceEEEecCC---------------CcEEEEEccCCCcceeeecCCC
Q psy8758 72 SYDIRQLNS-PL-N----V------------HKDMTSAAANED---------------FNLYSYDIRQLNSPLNVHKDMT 118 (198)
Q Consensus 72 ~~d~~~~~~-~~-~----~------------~~~~~~~~~~~~---------------~~i~~~d~~~~~~~~~~~~~~~ 118 (198)
.||.. ... .+ . . ..+.+.++...+ +.|..+|.. ++. ..+..+.
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~~-~~~~~~~ 171 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQM-IQVDTAF 171 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SCE-EEEEEEE
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC--CCE-EEeccCC
Confidence 88876 221 11 0 0 011233333332 455555543 222 2222233
Q ss_pred cceEEEEEc----cCCCEEEEe-ecCCcEEEEEcC-CCceee--EE--eccCc-ccEEEEEEcCCCCEEEEecCCCeEEE
Q psy8758 119 SAVTSVDYS----PTGREFVAG-GYDKSLRLYLAH-QGHSRD--IY--HTKRM-QHVTHTVWSLDNKFVISASDEMNLRV 187 (198)
Q Consensus 119 ~~i~~~~~s----p~~~~l~~~-~~d~~v~v~d~~-~~~~~~--~~--~~~~~-~~v~~~~~s~~~~~l~~~~~dg~v~~ 187 (198)
.....++++ |+++.+..+ ..++.|.+||.. .++... .+ ...+. ..+..++++++|+++++...++.|.+
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV 251 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEE
Confidence 456789999 999765544 567899999986 443211 11 12222 56788999999998888777889999
Q ss_pred EecCCCccc
Q psy8758 188 WKAHASEKL 196 (198)
Q Consensus 188 w~~~~~~~~ 196 (198)
||.++++.+
T Consensus 252 ~d~~~g~~~ 260 (314)
T 1pjx_A 252 FGPDGGQPK 260 (314)
T ss_dssp ECTTCBSCS
T ss_pred EcCCCCcEe
Confidence 999877653
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.41 E-value=1.6e-10 Score=81.34 Aligned_cols=173 Identities=10% Similarity=0.032 Sum_probs=110.9
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee---ecCceeeEEeCCCCCeEEEEecC----------Cc
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV---MSLRSNMVSWNPMEAFVFTAANE----------DF 68 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~----------d~ 68 (198)
+.+.+++++++|+++++ . +..|.+||..+++. ..+.... ....++.++++|+++..+.+... .+
T Consensus 54 ~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~-~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 54 APVSSVALRQSGGYVAT-I-GTKFCALNWKEQSA-VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp SCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEE-EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred CceEEEEECCCCCEEEE-E-CCeEEEEECCCCcE-EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCc
Confidence 35789999999995554 3 56799999877653 2222211 12346789999999976654321 23
Q ss_pred cEEEEeccCCCCc------------cccccCceEEEecCCCcEEEEEcc-CCCcc-----eeeecCCCcceEEEEEccCC
Q psy8758 69 NLYSYDIRQLNSP------------LNVHKDMTSAAANEDFNLYSYDIR-QLNSP-----LNVHKDMTSAVTSVDYSPTG 130 (198)
Q Consensus 69 ~i~~~d~~~~~~~------------~~~~~~~~~~~~~~~~~i~~~d~~-~~~~~-----~~~~~~~~~~i~~~~~sp~~ 130 (198)
.++.++....... +......++++.+.++.|..|++. ..+.. +..+......+..++++++|
T Consensus 131 ~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G 210 (297)
T 3g4e_A 131 ALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG 210 (297)
T ss_dssp EEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS
T ss_pred EEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC
Confidence 4444443321111 111112345666677889999874 21221 12222334567899999999
Q ss_pred CEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEc-CCCCEEEE
Q psy8758 131 REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWS-LDNKFVIS 178 (198)
Q Consensus 131 ~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s-~~~~~l~~ 178 (198)
++.++....+.|..||..+++.+..+. .+...+++++|. |+++.|+.
T Consensus 211 ~lwva~~~~~~v~~~d~~tG~~~~~i~-~p~~~~t~~~f~g~d~~~L~v 258 (297)
T 3g4e_A 211 KLWVACYNGGRVIRLDPVTGKRLQTVK-LPVDKTTSCCFGGKNYSEMYV 258 (297)
T ss_dssp CEEEEEETTTEEEEECTTTCCEEEEEE-CSSSBEEEEEEESGGGCEEEE
T ss_pred CEEEEEcCCCEEEEEcCCCceEEEEEE-CCCCCceEEEEeCCCCCEEEE
Confidence 988887778899999999888877763 344679999998 88875543
No 212
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.40 E-value=5.2e-10 Score=77.02 Aligned_cols=185 Identities=11% Similarity=0.060 Sum_probs=125.4
Q ss_pred eeEEEECCCCceEEEeeC--CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 4 VTHTVWSLDNKFVISASD--EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
...++|+|++.++++.+. ++.|+++|+.+++....+... .......+.+++..++.+...++.+.++|..+.+..
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~---~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMD---DSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECC---TTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecC---CCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEE
Confidence 368999998765554443 579999999999876665431 222223344446778777778899999998765321
Q ss_pred --cccc---------cCceEEEecCCCcEEEEEccCCCcceeeecCC--C---cceEEEEEccCCCEEEEeecCCcEEEE
Q psy8758 82 --LNVH---------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM--T---SAVTSVDYSPTGREFVAGGYDKSLRLY 145 (198)
Q Consensus 82 --~~~~---------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~---~~i~~~~~sp~~~~l~~~~~d~~v~v~ 145 (198)
+... .+..++.+..++.|.++|..+ .+.+..+.-. . ..++.+.|. +|+..+....++.|.+.
T Consensus 100 ~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t-~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vI 177 (266)
T 2iwa_A 100 KNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHT-FKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARI 177 (266)
T ss_dssp EEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCC-CcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEE
Confidence 1111 122344445688999999987 4555555421 1 136788888 77666666668899999
Q ss_pred EcCCCceeeEEeccC------------cccEEEEEEcCCCC-EEEEecCCCeEEEEecCCC
Q psy8758 146 LAHQGHSRDIYHTKR------------MQHVTHTVWSLDNK-FVISASDEMNLRVWKAHAS 193 (198)
Q Consensus 146 d~~~~~~~~~~~~~~------------~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~~ 193 (198)
|..+++.+..+..+. ......++|+|+++ +++++...+.+...++...
T Consensus 178 D~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 178 SAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp ETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred ECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 999999888874321 13568999999986 5566777888988887654
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.39 E-value=7.6e-10 Score=81.38 Aligned_cols=181 Identities=10% Similarity=0.084 Sum_probs=121.4
Q ss_pred EEECCCCceEEEeeCCC--eEEEEEccCCceeeeeeee-e-ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758 7 TVWSLDNKFVISASDEM--NLRVWKAHASEKLGPIRKV-V-MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL 82 (198)
Q Consensus 7 ~~~s~~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 82 (198)
++|+|+++.|+++..++ .|.+++...+.....+... . ....+.+++++|++..++++ ..++.|+.||........
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~-d~~~~I~~~d~~~~~~~~ 254 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFV-DSNKNFGRFNVKTQEVTL 254 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEE-CTTCEEEEEETTTCCEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEE-ECCCcEEEEECCCCCEEE
Confidence 88999999888887765 7888888765443333111 1 23456889999966666664 568889999976432111
Q ss_pred ------------------ccc--cCceEEEecCCCcEEEEEccCCCcceeeecCC---------------CcceEEEEEc
Q psy8758 83 ------------------NVH--KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM---------------TSAVTSVDYS 127 (198)
Q Consensus 83 ------------------~~~--~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~---------------~~~i~~~~~s 127 (198)
..+ .+.++++-..++.|+.|+... . ...+.++ -.....++++
T Consensus 255 ~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g--~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d 331 (409)
T 3hrp_A 255 IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG--E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVD 331 (409)
T ss_dssp EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC--C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEEC
T ss_pred EecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC--C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEe
Confidence 111 233455555667777777653 2 2222222 1347899999
Q ss_pred cCCCEEEEee-cCCcEEEEEcCCCceeeEEecc-------------CcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758 128 PTGREFVAGG-YDKSLRLYLAHQGHSRDIYHTK-------------RMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 128 p~~~~l~~~~-~d~~v~v~d~~~~~~~~~~~~~-------------~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
|+|+++++-. .++.|+.|++.++......-.+ .-.....++++|+|.++++-..++.|+.++++
T Consensus 332 ~dG~lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 332 EDGNFYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp TTCCEEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred CCCCEEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 9999888877 8899999998887754433110 02458899999998888888888899888753
No 214
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.39 E-value=1.4e-10 Score=90.74 Aligned_cols=186 Identities=10% Similarity=0.032 Sum_probs=120.4
Q ss_pred eEEEECCCCceEEEeeCCC-------------eEEEEEccCCceee-eeeeee--ecCceeeEEeCCCCCeEEEEecC--
Q psy8758 5 THTVWSLDNKFVISASDEM-------------NLRVWKAHASEKLG-PIRKVV--MSLRSNMVSWNPMEAFVFTAANE-- 66 (198)
Q Consensus 5 ~~~~~s~~~~~l~~~~~d~-------------~i~i~~~~~~~~~~-~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~-- 66 (198)
..++|+ ||+.|+.++.+. .|++|++.++.... .+.... +......+.|+|++++++.+...
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 578999 999888887763 48999987764321 222111 12346788999999998776532
Q ss_pred -CccEEEEeccCCCC---ccc-----------cccCceEEEecC---CCcEEEEEccCCCc-ceeeecCCCcceEEEEEc
Q psy8758 67 -DFNLYSYDIRQLNS---PLN-----------VHKDMTSAAANE---DFNLYSYDIRQLNS-PLNVHKDMTSAVTSVDYS 127 (198)
Q Consensus 67 -d~~i~~~d~~~~~~---~~~-----------~~~~~~~~~~~~---~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~~s 127 (198)
+..++++|+..... .+. ...+.+++.... .+.|..+|+.+... ..+.+..+...+. .|+
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s 334 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVH 334 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEE
T ss_pred CCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEE
Confidence 35899999865421 111 112234444443 36799999887321 1345555555554 899
Q ss_pred cCCCEEEEeecCC---cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC----CeEEEEecCCCc
Q psy8758 128 PTGREFVAGGYDK---SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE----MNLRVWKAHASE 194 (198)
Q Consensus 128 p~~~~l~~~~~d~---~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~v~~w~~~~~~ 194 (198)
|+++.|+....++ .|++|++..+.. ..+.......+..+.++|+++.++....+ +.++.||+.+++
T Consensus 335 ~~g~~lv~~~~~~g~~~l~~~d~~g~~~-~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 335 SGSGYLFAEYMVDATARVEQFDYEGKRV-REVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EETTEEEEEEEETTEEEEEEECTTSCEE-EEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EECCEEEEEEEECCeeEEEEEECCCCee-EEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 9999887766543 689999885543 33323344567888889988866544333 789999998775
No 215
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.33 E-value=7.5e-11 Score=85.57 Aligned_cols=134 Identities=11% Similarity=0.086 Sum_probs=99.6
Q ss_pred ceeeEEeCCCCCeEEEEecCCccEEEEeccCCC----------Cc-----------cccccCceEEEecCCCcEEEEEcc
Q psy8758 47 RSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN----------SP-----------LNVHKDMTSAAANEDFNLYSYDIR 105 (198)
Q Consensus 47 ~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~----------~~-----------~~~~~~~~~~~~~~~~~i~~~d~~ 105 (198)
.++.+++++....+++++ .+ .+.+|++.... .+ +.. .+..++++ .++.|++||++
T Consensus 39 ~~nlLais~~~gll~a~~-~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~~l~f-d~~~L~v~-~~~~l~v~dv~ 114 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAAS-GS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCF-HGDQVLVS-TRNALYSLDLE 114 (388)
T ss_dssp CCBCEEEETTTTEEEEEE-TT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEE-ETTEEEEE-ESSEEEEEESS
T ss_pred cccEEEEcCCCCEEEEeC-CC-EEEEEEhhHhhhhhccccccccceEEeeCCCeeEEEE-CCCEEEEE-cCCcEEEEEch
Confidence 578999999999888754 45 56668864222 00 111 33456666 88999999998
Q ss_pred CCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeE
Q psy8758 106 QLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNL 185 (198)
Q Consensus 106 ~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v 185 (198)
+. ........+..++.++.+.+. .+++++.||.+.+||+.++.... +...|.+++|||+| ++.+..||.+
T Consensus 115 sl-~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~-----~~~~Vs~v~WSpkG--~~vg~~dg~i 184 (388)
T 1xip_A 115 EL-SEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ-----LAQNVTSFDVTNSQ--LAVLLKDRSF 184 (388)
T ss_dssp ST-TCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE-----EEESEEEEEECSSE--EEEEETTSCE
T ss_pred hh-hccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc-----ccCCceEEEEcCCc--eEEEEcCCcE
Confidence 74 344555667777888777654 38888999999999999887654 23589999999999 5678889999
Q ss_pred EEEecCCCc
Q psy8758 186 RVWKAHASE 194 (198)
Q Consensus 186 ~~w~~~~~~ 194 (198)
++|+...++
T Consensus 185 ~~~~~~~~~ 193 (388)
T 1xip_A 185 QSFAWRNGE 193 (388)
T ss_dssp EEEEEETTE
T ss_pred EEEcCCCcc
Confidence 999888766
No 216
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.32 E-value=2.8e-10 Score=89.05 Aligned_cols=170 Identities=11% Similarity=0.054 Sum_probs=101.0
Q ss_pred ceeEEEECCCCceEEEe-----eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758 3 HVTHTVWSLDNKFVISA-----SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~-----~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~ 77 (198)
.+..++|||||+++|.+ +....|+++|+.+++..... . .......++|+ |++.++.+. .+.. +-.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~--~-~~~k~~~~~Ws-Dg~~l~y~~-~~~~----~~~- 199 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP--L-KDVKFSGISWL-GNEGFFYSS-YDKP----DGS- 199 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE--E-EEEESCCCEEE-TTTEEEEEE-SSCC----C---
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc--c-CCceeccEEEe-CCCEEEEEE-ecCc----ccc-
Confidence 46788999999988843 33357999999998753321 1 11123578999 999998865 3321 000
Q ss_pred CCCccccccCceEEEecCCCcEEEEEccCCCcc-eeee--cC-CCcceEEEEEccCCCEEEEeec----CCcEEEEEcCC
Q psy8758 78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSP-LNVH--KD-MTSAVTSVDYSPTGREFVAGGY----DKSLRLYLAHQ 149 (198)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~--~~-~~~~i~~~~~sp~~~~l~~~~~----d~~v~v~d~~~ 149 (198)
..........|++|++.+.... ...+ .. +......+.|+|||++|+.... .+.|+++|+.+
T Consensus 200 -----------~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 268 (693)
T 3iuj_A 200 -----------ELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQ 268 (693)
T ss_dssp ----------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTS
T ss_pred -----------cccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCC
Confidence 0000112345666776653221 2222 22 3445778999999998865432 35899999987
Q ss_pred Cce-eeEEeccCcccEEEEEEcCCCCEEE-EecC---CCeEEEEecCCCcc
Q psy8758 150 GHS-RDIYHTKRMQHVTHTVWSLDNKFVI-SASD---EMNLRVWKAHASEK 195 (198)
Q Consensus 150 ~~~-~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~---dg~v~~w~~~~~~~ 195 (198)
+.. ...+ ..+....... |+++|..|+ .... .+.|..+++.+++.
T Consensus 269 ~~~~~~~l-~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~ 317 (693)
T 3iuj_A 269 ENAPLLTV-QGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP 317 (693)
T ss_dssp TTCCCEEE-ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred CCCceEEE-eCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 642 2233 3344444444 667666554 4333 36799999987643
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.31 E-value=2e-09 Score=76.02 Aligned_cols=181 Identities=8% Similarity=0.044 Sum_probs=109.5
Q ss_pred eeEEEECCCCc-eEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758 4 VTHTVWSLDNK-FVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL 82 (198)
Q Consensus 4 v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 82 (198)
.....|+|+|+ ++++...++.|..|+. +++ ...+.. ....+..++++++++.+++ ...++.|..|+.......+
T Consensus 47 ~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~--~~~~~~gl~~d~dG~l~v~-~~~~~~v~~~~~~g~~~~~ 121 (305)
T 3dr2_A 47 SEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLD--ATAFTNGNAVDAQQRLVHC-EHGRRAITRSDADGQAHLL 121 (305)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEE--SCSCEEEEEECTTSCEEEE-ETTTTEEEEECTTSCEEEE
T ss_pred ccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeC--CCCccceeeECCCCCEEEE-ECCCCEEEEECCCCCEEEE
Confidence 45788999998 5666667889999987 444 233332 3456789999999985544 3455778888864221111
Q ss_pred ---------------ccc-cCceEEE----ecC-------------CCcEEEEEccCCCcceeeecCCCcceEEEEEccC
Q psy8758 83 ---------------NVH-KDMTSAA----ANE-------------DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT 129 (198)
Q Consensus 83 ---------------~~~-~~~~~~~----~~~-------------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~ 129 (198)
... .+.+.++ +.. .+.|..+|..+ ++... +. .......++|+||
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~-g~~~~-~~-~~~~p~gl~~spd 198 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG-SPLQR-MA-DLDHPNGLAFSPD 198 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS-CCCEE-EE-EESSEEEEEECTT
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCC-CcEEE-Ee-cCCCCcceEEcCC
Confidence 011 1223332 221 24566666644 23222 22 3345678999999
Q ss_pred CCEEEEeecC------CcEEEEEcCCCcee--eEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 130 GREFVAGGYD------KSLRLYLAHQGHSR--DIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 130 ~~~l~~~~~d------~~v~v~d~~~~~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
++.|+.+... +.|.+|++..+... ..+..........++++++|++.++. .+ .|.+|+.+ ++.
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~~-g~~ 269 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDSD-GQL 269 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECTT-SCE
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECCC-CCE
Confidence 9987776654 78999998765421 11111122345678999999955544 44 59999884 443
No 218
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.30 E-value=3.2e-10 Score=81.42 Aligned_cols=178 Identities=8% Similarity=-0.001 Sum_probs=108.6
Q ss_pred cceeEEEECCCCceEEEeeC-----CCeEEEEEccCCceeeeeeee----eecCceeeEEeCCCCCeEEEEec---CCcc
Q psy8758 2 QHVTHTVWSLDNKFVISASD-----EMNLRVWKAHASEKLGPIRKV----VMSLRSNMVSWNPMEAFVFTAAN---EDFN 69 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~-----d~~i~i~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~---~d~~ 69 (198)
..+.+++++++|+++++-.. ++.|.+||+.+++....+... .....+..++++|++..++++.. .++.
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~ 146 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAA 146 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCE
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCe
Confidence 35789999999986665433 578999999888755544321 11234578999987667766654 5778
Q ss_pred EEEEeccCCCCc--cccccC------------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEE
Q psy8758 70 LYSYDIRQLNSP--LNVHKD------------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA 135 (198)
Q Consensus 70 i~~~d~~~~~~~--~~~~~~------------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~ 135 (198)
|.+||..+.... +..|.. ..+.+...++.+..| ...+..|+|+|+|+.|+.
T Consensus 147 i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~---------------~~~~~gia~s~dg~~ly~ 211 (343)
T 2qe8_A 147 LIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRP---------------HLGVNGIVLDAENEWLYL 211 (343)
T ss_dssp EEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECC---------------CCCEEEEEECTTSCEEEE
T ss_pred EEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceece---------------ecccceeEeccCCCEEEE
Confidence 999998754311 111100 011111122221111 124678999999998888
Q ss_pred eecCC-cEEEEEcC---CCc-----eeeE-EeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 136 GGYDK-SLRLYLAH---QGH-----SRDI-YHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 136 ~~~d~-~v~v~d~~---~~~-----~~~~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
+..++ .+..++.. .+. .... ...++......++++++|+++++...++.|.+||..+++
T Consensus 212 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 212 SPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp EESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred EeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence 77665 45555432 111 0000 001222356678999999999888889999999985554
No 219
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.29 E-value=4.9e-10 Score=81.15 Aligned_cols=148 Identities=9% Similarity=-0.009 Sum_probs=98.5
Q ss_pred EEECCCCceEEEeeC-----CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec---------CCccEEE
Q psy8758 7 TVWSLDNKFVISASD-----EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN---------EDFNLYS 72 (198)
Q Consensus 7 ~~~s~~~~~l~~~~~-----d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------~d~~i~~ 72 (198)
....|+++.+++... ++.|.++|..+++....+..- .. . .+.++|++++++++.. .++.|.+
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG--~~-P-~va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG--FL-P-NPVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC--SS-C-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC--CC-C-cEEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 345789998888765 679999999988877666542 22 2 4999999999988642 2345666
Q ss_pred EeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCC-------CcceEEEEEccCCCEEEEeec--CCcEE
Q psy8758 73 YDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM-------TSAVTSVDYSPTGREFVAGGY--DKSLR 143 (198)
Q Consensus 73 ~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~~i~~~~~sp~~~~l~~~~~--d~~v~ 143 (198)
||..+ .+.+..+.-. ......++|+|||+++++++. ++.|.
T Consensus 114 iD~~t------------------------------~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~Vs 163 (386)
T 3sjl_D 114 FDPVT------------------------------LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVG 163 (386)
T ss_dssp ECTTT------------------------------CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEE
T ss_pred EECCC------------------------------CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEE
Confidence 66554 3445544321 123557999999999888764 68999
Q ss_pred EEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758 144 LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 192 (198)
Q Consensus 144 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~ 192 (198)
++|+.+++.+..+..... ...+....+.+++.+.||.+.+.++.+
T Consensus 164 VID~~t~~vv~tI~v~g~----~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 164 VVDLEGKAFKRMLDVPDC----YHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp EEETTTTEEEEEEECCSE----EEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred EEECCCCcEEEEEECCCc----ceeecCCCceeEEECCCCCEEEEECCC
Confidence 999999998888743321 112222334455555666666666654
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.28 E-value=4.1e-09 Score=75.19 Aligned_cols=179 Identities=10% Similarity=0.012 Sum_probs=110.4
Q ss_pred eEEEECCCC-ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc-c
Q psy8758 5 THTVWSLDN-KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP-L 82 (198)
Q Consensus 5 ~~~~~s~~~-~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~-~ 82 (198)
.+..|+|++ .++++...++.|..||..+++. ..+ .....+.++.|+|+++.++++ .+ .|.+||..+.... +
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~---~~~~~v~~i~~~~dg~l~v~~--~~-gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRK-TVH---ALPFMGSALAKISDSKQLIAS--DD-GLFLRDTATGVLTLH 124 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEE-EEE---ECSSCEEEEEEEETTEEEEEE--TT-EEEEEETTTCCEEEE
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcE-EEE---ECCCcceEEEEeCCCeEEEEE--CC-CEEEEECCCCcEEEE
Confidence 578899975 4556666788999999877642 222 224568899999998877653 33 4888887543311 1
Q ss_pred cc---------------c-cCceEEEecC------CCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEe-ecC
Q psy8758 83 NV---------------H-KDMTSAAANE------DFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAG-GYD 139 (198)
Q Consensus 83 ~~---------------~-~~~~~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~d 139 (198)
.. . .+.+.++... .+.|..++ + ++. ..+.........++|+|+++.++.+ +.+
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~-g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--K-GKV-TKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--T-TEE-EEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--C-CcE-EEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 00 0 1122222211 23444454 2 332 2222223456789999999876554 457
Q ss_pred CcEEEEEcC--CC-cee--eEE--eccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 140 KSLRLYLAH--QG-HSR--DIY--HTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 140 ~~v~v~d~~--~~-~~~--~~~--~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
+.|.+||+. ++ ... ..+ .......+..++++++|+++++...++.|..|+. +++.
T Consensus 201 ~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~ 262 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNH 262 (326)
T ss_dssp CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCE
T ss_pred CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCE
Confidence 899999986 55 321 112 1223356788999999998777666788999998 4543
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.24 E-value=2.4e-09 Score=77.81 Aligned_cols=146 Identities=10% Similarity=-0.025 Sum_probs=96.1
Q ss_pred ECCCCceEEEeeC--CC---eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec---------CCccEEEEe
Q psy8758 9 WSLDNKFVISASD--EM---NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN---------EDFNLYSYD 74 (198)
Q Consensus 9 ~s~~~~~l~~~~~--d~---~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------~d~~i~~~d 74 (198)
..|+++++++... .. .|.++|..+++....+.. .... .++++||+++++++.. .++.|.++|
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~---g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG---GFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC---CCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 4578887777653 22 789999988876544433 2233 8999999999998742 234566666
Q ss_pred ccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCC-------CcceEEEEEccCCCEEEEeec--CCcEEEE
Q psy8758 75 IRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM-------TSAVTSVDYSPTGREFVAGGY--DKSLRLY 145 (198)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~~i~~~~~sp~~~~l~~~~~--d~~v~v~ 145 (198)
..+. +.+..+... ......++|+|||++|++++. ++.|.++
T Consensus 104 ~~t~------------------------------~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~vi 153 (373)
T 2mad_H 104 PVTF------------------------------LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLV 153 (373)
T ss_pred CCCC------------------------------cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEE
Confidence 5432 333333211 123457999999999998874 5789999
Q ss_pred EcCCCceeeE-EeccCcccEEEEEEcCCC-CEEEEecCCCeEEEEecCCCcc
Q psy8758 146 LAHQGHSRDI-YHTKRMQHVTHTVWSLDN-KFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 146 d~~~~~~~~~-~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
| .+++.... +..+ .. +.+.|++ +.+++.+.||.+.+++. +++.
T Consensus 154 D-~t~~~~~~~i~~~--~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~ 198 (373)
T 2mad_H 154 V-QGGSSDDQLLSSP--TC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGA 198 (373)
T ss_pred E-CCCCEEeEEcCCC--ce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcE
Confidence 9 99888766 5222 12 3445554 34556677888888888 6654
No 222
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.24 E-value=2e-09 Score=73.43 Aligned_cols=156 Identities=8% Similarity=0.016 Sum_probs=106.4
Q ss_pred eeEEEECCCCceEEEeeCCC--eEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 4 VTHTVWSLDNKFVISASDEM--NLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d~--~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
...+.|+ ++.++.+.+.+| .|+.+|+.+++....+.. ..........+++..++...-.++.+.++|..+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l---~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t---- 116 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL---GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRN---- 116 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEESSSSEEEEEETTT----
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec---CCccceeEEEEeCCEEEEEEeeCCEEEEEECcc----
Confidence 3567888 677666767665 899999999987666543 233334334445666666555566777777665
Q ss_pred cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccC-
Q psy8758 82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKR- 160 (198)
Q Consensus 82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~- 160 (198)
.+.+.++.... ....+++|++.|+.+..++.|.++|..+.+....+....
T Consensus 117 --------------------------~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~ 167 (262)
T 3nol_A 117 --------------------------LRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAH 167 (262)
T ss_dssp --------------------------CCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEET
T ss_pred --------------------------CcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccC
Confidence 35666665422 223455678888877778899999999988877764321
Q ss_pred c---ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758 161 M---QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE 197 (198)
Q Consensus 161 ~---~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~ 197 (198)
. ..++.+.|. +|+.++..-.++.|.+.|.++|+.++
T Consensus 168 g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~ 206 (262)
T 3nol_A 168 GEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTG 206 (262)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEE
T ss_pred CccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEE
Confidence 1 345668887 77766666678899999999998753
No 223
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.23 E-value=6.9e-10 Score=83.89 Aligned_cols=178 Identities=8% Similarity=0.015 Sum_probs=120.0
Q ss_pred ceeEEEE-C-CCCceEEEee------------------CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEE
Q psy8758 3 HVTHTVW-S-LDNKFVISAS------------------DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFT 62 (198)
Q Consensus 3 ~v~~~~~-s-~~~~~l~~~~------------------~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 62 (198)
....+++ + |+++++++++ .++.+.+.|.++.+....+.. .+....++++|+++++++
T Consensus 135 ~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~V---gg~pd~~~~spdGk~~~v 211 (595)
T 1fwx_A 135 GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLV---SGNLDNCDADYEGKWAFS 211 (595)
T ss_dssp SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEE---SSCCCCEEECSSSSEEEE
T ss_pred CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEe---CCCccceEECCCCCEEEE
Confidence 3567787 5 8999888874 345788999988766555543 234567889999999999
Q ss_pred EecCC--------------ccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCC-Ccc-eeeecCCCcceEEEEE
Q psy8758 63 AANED--------------FNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQL-NSP-LNVHKDMTSAVTSVDY 126 (198)
Q Consensus 63 ~~~~d--------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~-~~~~~~~~~~i~~~~~ 126 (198)
++..+ ..+.+.|............ ...+ +.+.+.|.++. +.. +..+.. .....++.+
T Consensus 212 t~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk-~~~i-----~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~ 284 (595)
T 1fwx_A 212 TSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGD-YQEL-----NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNM 284 (595)
T ss_dssp EESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTC-SEEE-----TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEE
T ss_pred EecCcccCcchhhccccccceEEEeeccceeEeccCCC-eeEE-----CcEEEEeCcccCCceeEEEEec-CCCceEEEE
Confidence 87444 3466666554332221111 1111 55999999861 123 444432 234678999
Q ss_pred ccCCCEEEEee-cCCcEEEEEcCCCc------------eeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758 127 SPTGREFVAGG-YDKSLRLYLAHQGH------------SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 192 (198)
Q Consensus 127 sp~~~~l~~~~-~d~~v~v~d~~~~~------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~ 192 (198)
+|||+++++++ .+.+|.++|+.+.+ ..... .-....+.++|+|+|....+.-.|+.|.+||+++
T Consensus 285 sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v--~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 285 APDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP--ELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC--BCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred cCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc--CCCCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 99999877665 57899999999653 22222 2235789999999995445667899999999876
No 224
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.22 E-value=9.8e-10 Score=80.50 Aligned_cols=158 Identities=11% Similarity=0.057 Sum_probs=100.0
Q ss_pred EEEECCCCceEEEee-------------------CCCeEEEEEccCCceeeeeeeeeecCceeeEEe--CCCCCeEEEEe
Q psy8758 6 HTVWSLDNKFVISAS-------------------DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSW--NPMEAFVFTAA 64 (198)
Q Consensus 6 ~~~~s~~~~~l~~~~-------------------~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~ 64 (198)
.+-|+|+++.+++.. .+.+|.+||+.+++....+...........+.| +|++++.++++
T Consensus 192 d~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~ 271 (462)
T 2ece_A 192 DFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINM 271 (462)
T ss_dssp CEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEE
T ss_pred eEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEE
Confidence 477899999888874 367999999988765555443111123345545 99999999887
Q ss_pred c-----CCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeec-------CCCcceEEEEEccCCCE
Q psy8758 65 N-----EDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK-------DMTSAVTSVDYSPTGRE 132 (198)
Q Consensus 65 ~-----~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-------~~~~~i~~~~~sp~~~~ 132 (198)
. .+++|.+|..... .+ ..+.+.|+.. .+....+. +.......|.+||||++
T Consensus 272 e~~~~~Lss~V~v~~~d~g--~~--------------~~~~vIdi~~-~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrf 334 (462)
T 2ece_A 272 VVSLKDLSSSIWLWFYEDG--KW--------------NAEKVIEIPA-EPLEGNLPEILKPFKAVPPLVTDIDISLDDKF 334 (462)
T ss_dssp EEETTTCCEEEEEEEEETT--EE--------------EEEEEEEECC-EECCSSCCGGGGGGTEECCCCCCEEECTTSCE
T ss_pred eeeccCCCceEEEEEecCC--ce--------------eEEEEEeCCC-ccccccccccccccccCCCceeEEEECCCCCE
Confidence 6 7788888775421 00 1122333322 11111110 00234678999999998
Q ss_pred EEEeec-CCcEEEEEcCC---CceeeEEeccCc-------------ccEEEEEEcCCCCEEEEec
Q psy8758 133 FVAGGY-DKSLRLYLAHQ---GHSRDIYHTKRM-------------QHVTHTVWSLDNKFVISAS 180 (198)
Q Consensus 133 l~~~~~-d~~v~v~d~~~---~~~~~~~~~~~~-------------~~v~~~~~s~~~~~l~~~~ 180 (198)
|.++.. .+.|.+||+.. .+.+..+..+.. .....++++|||++|+++.
T Consensus 335 LYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 335 LYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 877765 78999999863 244444433310 1357899999999988776
No 225
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.20 E-value=4.6e-09 Score=71.76 Aligned_cols=154 Identities=6% Similarity=-0.073 Sum_probs=104.9
Q ss_pred eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccc
Q psy8758 5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNV 84 (198)
Q Consensus 5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~ 84 (198)
..+.|+ ++.++.+.+.+|.|+++|+.+++....+ . ..........+++..++...-.++.+.++|..+
T Consensus 58 qGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l--~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~T------- 125 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME--R--LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMP------- 125 (268)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE--E--CTTCCEEEEEECSSCEEEEESSSCEEEEEETTT-------
T ss_pred ceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE--C--CCCcceeEEEEeCCEEEEEEccCCEEEEEECCc-------
Confidence 466776 3566677778889999999999877666 2 223333223334555655555667777777665
Q ss_pred ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccC-c--
Q psy8758 85 HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKR-M-- 161 (198)
Q Consensus 85 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~-~-- 161 (198)
.+.+.++..... ...+.+|++.|+.+..++.|.++|..+.+.+..+.... .
T Consensus 126 -----------------------l~~~~ti~~~~e---GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~ 179 (268)
T 3nok_A 126 -----------------------PQRERTTRYSGE---GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP 179 (268)
T ss_dssp -----------------------TEEEEEEECSSC---CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE
T ss_pred -----------------------CcEEEEEeCCCc---eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc
Confidence 456666654222 23344678888887789999999999988877763321 1
Q ss_pred -ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758 162 -QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE 197 (198)
Q Consensus 162 -~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~ 197 (198)
..++.+.|. +|+.++..-.++.|.+-|.++|+.++
T Consensus 180 v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~ 215 (268)
T 3nok_A 180 VELINELECA-NGVIYANIWHSSDVLEIDPATGTVVG 215 (268)
T ss_dssp CCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEE
T ss_pred cccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEE
Confidence 245778887 77766666678899999999998753
No 226
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.19 E-value=1.9e-08 Score=71.71 Aligned_cols=148 Identities=7% Similarity=0.021 Sum_probs=92.4
Q ss_pred ceeEEEECCCCceEEEeeCC----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc--
Q psy8758 3 HVTHTVWSLDNKFVISASDE----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR-- 76 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~-- 76 (198)
.+++++++|+|+++++...+ +...||.+.+++ ...+.. .......++|+|+++.++++.+.++.|++|+..
T Consensus 135 ~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~-~~~~~~--~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~ 211 (326)
T 2ghs_A 135 RSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGK-VTKLFA--DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDAR 211 (326)
T ss_dssp EEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTE-EEEEEE--EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTT
T ss_pred CCCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCc-EEEeeC--CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccc
Confidence 47889999999976654321 223444443443 222221 223467899999999887776667888888875
Q ss_pred CCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758 77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY 156 (198)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 156 (198)
+... + .. ...+..+......+..++++++|++.++...++.|.+||. +++....+
T Consensus 212 ~Gl~-~----------------------~~-~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i 266 (326)
T 2ghs_A 212 TGLP-T----------------------GK-AEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARY 266 (326)
T ss_dssp TCCB-S----------------------SC-CEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEE
T ss_pred cCCc-c----------------------cC-ceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEE
Confidence 2100 0 00 0111112222344678999999998777766788999998 56655555
Q ss_pred eccCcccEEEEEEc-CCCCEEEEe
Q psy8758 157 HTKRMQHVTHTVWS-LDNKFVISA 179 (198)
Q Consensus 157 ~~~~~~~v~~~~~s-~~~~~l~~~ 179 (198)
..+...+.+++|+ |+++.|+.+
T Consensus 267 -~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 267 -EVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp -ECSCSBEEEEEEESTTSCEEEEE
T ss_pred -ECCCCCcEEEEEecCCCCEEEEE
Confidence 3344579999998 888765443
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.16 E-value=6.2e-09 Score=81.23 Aligned_cols=171 Identities=8% Similarity=0.025 Sum_probs=117.0
Q ss_pred CCeEEEEEccCCceeeeeeeeeec------------------------------CceeeEEeCCCCCeEEEEecCCc---
Q psy8758 22 EMNLRVWKAHASEKLGPIRKVVMS------------------------------LRSNMVSWNPMEAFVFTAANEDF--- 68 (198)
Q Consensus 22 d~~i~i~~~~~~~~~~~~~~~~~~------------------------------~~v~~~~~~~~~~~~~~~~~~d~--- 68 (198)
++.|+.+|..+++..-.+...... .....++++|++..+++. ..++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~-~~~~~~w 267 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVG-TGNGSPW 267 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESS
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEE-CCCCccc
Confidence 689999999999876555432111 011356788888877764 3332
Q ss_pred ----------------cEEEEeccCCCCccccc----------------------cC---ceEEEecCCCcEEEEEccCC
Q psy8758 69 ----------------NLYSYDIRQLNSPLNVH----------------------KD---MTSAAANEDFNLYSYDIRQL 107 (198)
Q Consensus 69 ----------------~i~~~d~~~~~~~~~~~----------------------~~---~~~~~~~~~~~i~~~d~~~~ 107 (198)
.|..+|..+.+...... .+ ..++.++.+|.++++|.++
T Consensus 268 ~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~t- 346 (677)
T 1kb0_A 268 SHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTN- 346 (677)
T ss_dssp CHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTT-
T ss_pred cCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCC-
Confidence 48888887665432211 01 4577888999999999988
Q ss_pred CcceeeecCCCc-----------ce------------------------EEEEEccCCCEEEEeec--------------
Q psy8758 108 NSPLNVHKDMTS-----------AV------------------------TSVDYSPTGREFVAGGY-------------- 138 (198)
Q Consensus 108 ~~~~~~~~~~~~-----------~i------------------------~~~~~sp~~~~l~~~~~-------------- 138 (198)
++++..+..... ++ ..++++|++.++++...
T Consensus 347 G~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~ 426 (677)
T 1kb0_A 347 GKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEF 426 (677)
T ss_dssp CCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCT
T ss_pred CCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccc
Confidence 666654432110 01 25789999887776533
Q ss_pred -----------------------------CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758 139 -----------------------------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK 189 (198)
Q Consensus 139 -----------------------------d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~ 189 (198)
.+.|..||+.+++.+.....+ .++....+..++..++.++.||.+++||
T Consensus 427 g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~--~~~~~g~~~~~g~~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 427 NQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV--SPWNGGTLTTAGNVVFQGTADGRLVAYH 504 (677)
T ss_dssp TCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred ccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC--CCCcCcceEeCCCEEEEECCCCcEEEEE
Confidence 277999999999988776332 4455556777888888899999999999
Q ss_pred cCCCccc
Q psy8758 190 AHASEKL 196 (198)
Q Consensus 190 ~~~~~~~ 196 (198)
.++|+.+
T Consensus 505 ~~tG~~l 511 (677)
T 1kb0_A 505 AATGEKL 511 (677)
T ss_dssp TTTCCEE
T ss_pred CCCCcee
Confidence 9999976
No 228
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.15 E-value=3.1e-08 Score=67.08 Aligned_cols=156 Identities=5% Similarity=0.003 Sum_probs=103.6
Q ss_pred eeEEEECCCCceEEEeeCC--CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 4 VTHTVWSLDNKFVISASDE--MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d--~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
...+.|++ +.++.+.+.+ ..|+.+|+.+++....+.. ..........+.+..++...-.++.+.++|..+
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l---~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~t---- 94 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEV---PPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLAT---- 94 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEEC---CTTCCEEEEEEETTEEEEEESSSSEEEEEETTT----
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeC---CCCcceeEEEEeCCEEEEEEeeCCEEEEEECCc----
Confidence 45678876 5555555554 4899999999987665543 223333333444566666555566777777665
Q ss_pred cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccC-
Q psy8758 82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKR- 160 (198)
Q Consensus 82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~- 160 (198)
.+.+.++..... ...+.++++.|+.+..++.|.++|..+.+.+..+....
T Consensus 95 --------------------------l~~~~ti~~~~~---Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~ 145 (243)
T 3mbr_X 95 --------------------------LTPRARFRYPGE---GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAG 145 (243)
T ss_dssp --------------------------TEEEEEEECSSC---CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEET
T ss_pred --------------------------CcEEEEEeCCCC---ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccC
Confidence 356666654322 23444677777777778999999999988877764321
Q ss_pred c---ccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758 161 M---QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE 197 (198)
Q Consensus 161 ~---~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~ 197 (198)
. ..++.+.|. +|+.++..-.++.|.+.|.++|+.++
T Consensus 146 g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~ 184 (243)
T 3mbr_X 146 GRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVA 184 (243)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEE
T ss_pred CcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEE
Confidence 1 345677776 67766666678899999999998753
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.14 E-value=1.1e-08 Score=79.95 Aligned_cols=171 Identities=10% Similarity=0.048 Sum_probs=114.3
Q ss_pred CCeEEEEEccCCceeeeeeeeee-----------------------------cCceeeEEeCCCCCeEEEEecCCc----
Q psy8758 22 EMNLRVWKAHASEKLGPIRKVVM-----------------------------SLRSNMVSWNPMEAFVFTAANEDF---- 68 (198)
Q Consensus 22 d~~i~i~~~~~~~~~~~~~~~~~-----------------------------~~~v~~~~~~~~~~~~~~~~~~d~---- 68 (198)
++.|+.||..+++..-.+..... ......++++|+...+++. ..++
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~-~~~g~~w~ 260 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIG-VGNGSLWD 260 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESSC
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEe-CCCCCccc
Confidence 68999999999987655542110 0011256788887777664 4554
Q ss_pred ---------------cEEEEeccCCCCcccccc-------------------------CceEEEecCCCcEEEEEccCCC
Q psy8758 69 ---------------NLYSYDIRQLNSPLNVHK-------------------------DMTSAAANEDFNLYSYDIRQLN 108 (198)
Q Consensus 69 ---------------~i~~~d~~~~~~~~~~~~-------------------------~~~~~~~~~~~~i~~~d~~~~~ 108 (198)
.|..+|..+.+....... ...++.++.+|.++++|.++ +
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G 339 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRAT-G 339 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT-C
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCC-C
Confidence 388889887654332110 11567788999999999988 5
Q ss_pred cceeeecCCC---------------------------------------cceEEEEEccCCCEEEEeec-----------
Q psy8758 109 SPLNVHKDMT---------------------------------------SAVTSVDYSPTGREFVAGGY----------- 138 (198)
Q Consensus 109 ~~~~~~~~~~---------------------------------------~~i~~~~~sp~~~~l~~~~~----------- 138 (198)
+++...+... ..-..++|+|+..++++...
T Consensus 340 ~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~ 419 (689)
T 1yiq_A 340 ELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPE 419 (689)
T ss_dssp CEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSS
T ss_pred CEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccc
Confidence 6553221100 00123789998877776522
Q ss_pred ----------------------------------CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCe
Q psy8758 139 ----------------------------------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMN 184 (198)
Q Consensus 139 ----------------------------------d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 184 (198)
+|.|+.||+.+++.+.....+ .++....++..+.+++.++.||.
T Consensus 420 ~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~gt~dg~ 497 (689)
T 1yiq_A 420 APKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV--TIFNGGTLSTAGNLVFEGSADGR 497 (689)
T ss_dssp CCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSE
T ss_pred cccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC--CCccCccceECCCEEEEECCCCc
Confidence 377999999999988776332 33344456667888888999999
Q ss_pred EEEEecCCCccc
Q psy8758 185 LRVWKAHASEKL 196 (198)
Q Consensus 185 v~~w~~~~~~~~ 196 (198)
++.||.++|+++
T Consensus 498 l~a~D~~tG~~l 509 (689)
T 1yiq_A 498 VIAYAADTGEKL 509 (689)
T ss_dssp EEEEETTTCCEE
T ss_pred EEEEECCCCccc
Confidence 999999999986
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.13 E-value=3.3e-07 Score=63.35 Aligned_cols=186 Identities=7% Similarity=-0.004 Sum_probs=113.0
Q ss_pred eeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc-
Q psy8758 4 VTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP- 81 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~- 81 (198)
..+++|++++..|+.+. ..+.|..+++..... ..+.. ........++++|++..++.+....+.|.+++.......
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~-~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTIIR-QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEEEC-TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-EEEEE-CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 46889999766555544 568999999875542 22211 111356889999988888877666788999887643211
Q ss_pred c-----------ccc--cCceEEEecC--CCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEe-ecCCcEEE
Q psy8758 82 L-----------NVH--KDMTSAAANE--DFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAG-GYDKSLRL 144 (198)
Q Consensus 82 ~-----------~~~--~~~~~~~~~~--~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~-~~d~~v~v 144 (198)
+ ... .+.++++... .+.|..+++.. .....+ .........++++|+++.|..+ ...+.|.+
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg--~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~ 193 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG--TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAEC 193 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS--CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC--CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEE
Confidence 1 011 1222333322 35677777653 222222 1223457899999987766544 45689999
Q ss_pred EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+|+.......... . ......++.. ++..+++...++.|..+|..+++.+
T Consensus 194 ~~~~g~~~~~~~~-~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 194 LNPAQPGRRKVLE-G-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEM 242 (267)
T ss_dssp EETTEEEEEEEEE-C-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEE
T ss_pred EecCCCceEEEec-C-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCce
Confidence 9997654433332 2 2344566654 3444445556789999999888754
No 231
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.08 E-value=1.5e-08 Score=74.55 Aligned_cols=114 Identities=9% Similarity=-0.026 Sum_probs=80.6
Q ss_pred CCCceEEEeeCC-----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec---------CCccEEEEecc
Q psy8758 11 LDNKFVISASDE-----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN---------EDFNLYSYDIR 76 (198)
Q Consensus 11 ~~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---------~d~~i~~~d~~ 76 (198)
++++++++.... +.|.++|..+.+....+... ... .+.++|++++++++.. .++.|.++|..
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG---~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~ 157 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG---FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPV 157 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC---SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC---CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECC
Confidence 467767666542 69999999998877666542 233 8999999999988642 24456666665
Q ss_pred CCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCC-------CcceEEEEEccCCCEEEEeec--CCcEEEEEc
Q psy8758 77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM-------TSAVTSVDYSPTGREFVAGGY--DKSLRLYLA 147 (198)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-------~~~i~~~~~sp~~~~l~~~~~--d~~v~v~d~ 147 (198)
+ .+.+..+.-. ......+.|+|||+++++++. ++.|.++|+
T Consensus 158 t------------------------------~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~ 207 (426)
T 3c75_H 158 T------------------------------FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDL 207 (426)
T ss_dssp T------------------------------CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEET
T ss_pred C------------------------------CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEEC
Confidence 4 3444444211 123457899999999998874 578999999
Q ss_pred CCCceeeEEec
Q psy8758 148 HQGHSRDIYHT 158 (198)
Q Consensus 148 ~~~~~~~~~~~ 158 (198)
.+++.+..+..
T Consensus 208 ~t~kvv~~I~v 218 (426)
T 3c75_H 208 EGKTFDRMLDV 218 (426)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCeEEEEEEc
Confidence 99998877744
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.06 E-value=4.7e-08 Score=67.32 Aligned_cols=145 Identities=8% Similarity=-0.027 Sum_probs=102.9
Q ss_pred eeeEEeCCCCCeEEEEec--CCccEEEEeccCCCCccc-------------cccCceEEEecCCCcEEEEEccCCCccee
Q psy8758 48 SNMVSWNPMEAFVFTAAN--EDFNLYSYDIRQLNSPLN-------------VHKDMTSAAANEDFNLYSYDIRQLNSPLN 112 (198)
Q Consensus 48 v~~~~~~~~~~~~~~~~~--~d~~i~~~d~~~~~~~~~-------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 112 (198)
...+.|+|++ .++.+.+ .++.|.++|+.+.+.... ...+.++++...++.+.++|..+ .+.+.
T Consensus 23 ~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t-~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRT-LSNIK 100 (266)
T ss_dssp EEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTT-TEEEE
T ss_pred cccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCC-CcEEE
Confidence 4789999986 4555433 257899999987652211 11334566777889999999987 56777
Q ss_pred eecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCc----ccEEEEEEcCCCCEEEEecCCCeEEEE
Q psy8758 113 VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRM----QHVTHTVWSLDNKFVISASDEMNLRVW 188 (198)
Q Consensus 113 ~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~~~~~dg~v~~w 188 (198)
.+..... ....+++||+.++++..++.|.++|..+.+....+..+.. ..++.+.|. +|+.++....++.|.+-
T Consensus 101 ~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vI 177 (266)
T 2iwa_A 101 NFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARI 177 (266)
T ss_dssp EEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEE
Confidence 7753311 2345777888777777789999999999888777643321 247788888 77666666678999999
Q ss_pred ecCCCcccc
Q psy8758 189 KAHASEKLE 197 (198)
Q Consensus 189 ~~~~~~~~~ 197 (198)
|..+++.++
T Consensus 178 D~~tg~V~~ 186 (266)
T 2iwa_A 178 SAKDGTLLG 186 (266)
T ss_dssp ETTTCCEEE
T ss_pred ECCCCcEEE
Confidence 999998653
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.01 E-value=1.2e-07 Score=69.62 Aligned_cols=137 Identities=9% Similarity=0.049 Sum_probs=95.8
Q ss_pred CCCCeEEEEecCCccEEEEeccCCCC------cc------------ccc-----cCceEEEecCC------CcEEEEEcc
Q psy8758 55 PMEAFVFTAANEDFNLYSYDIRQLNS------PL------------NVH-----KDMTSAAANED------FNLYSYDIR 105 (198)
Q Consensus 55 ~~~~~~~~~~~~d~~i~~~d~~~~~~------~~------------~~~-----~~~~~~~~~~~------~~i~~~d~~ 105 (198)
++.+++++.+..+..|.++|+.+... .+ ..| .+.+++++..+ +.+.++|..
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECC
Confidence 88999999988899999999864411 11 111 22355555444 789999998
Q ss_pred CCCcceeeecCCCc---ceEEEEEccCCCEEEEee-------------------cCCcEEEEEcCCCceeeEEecc-Ccc
Q psy8758 106 QLNSPLNVHKDMTS---AVTSVDYSPTGREFVAGG-------------------YDKSLRLYLAHQGHSRDIYHTK-RMQ 162 (198)
Q Consensus 106 ~~~~~~~~~~~~~~---~i~~~~~sp~~~~l~~~~-------------------~d~~v~v~d~~~~~~~~~~~~~-~~~ 162 (198)
+ .+.+..++.... -...+.|+|+++.++++. ...+|.+||+.+++....+..+ ...
T Consensus 173 T-~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 173 S-FEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp T-CCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred C-CeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 7 567777653222 234588899999998884 3689999999998887777554 223
Q ss_pred cEEEEEE--cCCCCEEEEec------CCCeEEEEecCC
Q psy8758 163 HVTHTVW--SLDNKFVISAS------DEMNLRVWKAHA 192 (198)
Q Consensus 163 ~v~~~~~--s~~~~~l~~~~------~dg~v~~w~~~~ 192 (198)
....+.| +|++++++.++ .+++|.+|..+.
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~ 289 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED 289 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC
Confidence 4566666 99999877665 567887766543
No 234
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.00 E-value=1.4e-08 Score=72.97 Aligned_cols=157 Identities=10% Similarity=0.106 Sum_probs=91.1
Q ss_pred eeEEEECCCCceE-EEee---CCCeEEEEEccCCceeeeeeeee---------------------------ecCceeeEE
Q psy8758 4 VTHTVWSLDNKFV-ISAS---DEMNLRVWKAHASEKLGPIRKVV---------------------------MSLRSNMVS 52 (198)
Q Consensus 4 v~~~~~s~~~~~l-~~~~---~d~~i~i~~~~~~~~~~~~~~~~---------------------------~~~~v~~~~ 52 (198)
+..++++|++..+ ++-. .++.|.+||+.+++..+.+..+. ....+..++
T Consensus 122 ~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia 201 (343)
T 2qe8_A 122 VNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIV 201 (343)
T ss_dssp CCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEE
T ss_pred cceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeE
Confidence 5788999865444 4444 57899999998776443331100 001245667
Q ss_pred eCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCccee--eecCCCcceEEEEEccCC
Q psy8758 53 WNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTG 130 (198)
Q Consensus 53 ~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~ 130 (198)
|+|+++.++++......++.++...... +.+ .. .+... ...++......++++++|
T Consensus 202 ~s~dg~~ly~~~~~~~~l~~~~~~~~~~----------------~~~-----~~-~~~~~~~~~~g~~g~pdgia~d~~G 259 (343)
T 2qe8_A 202 LDAENEWLYLSPMHSTSMYRIKSADLSN----------------LQL-----TD-AELGSKIERYSEKPICDGISIDKDH 259 (343)
T ss_dssp ECTTSCEEEEEESSCSEEEEEEHHHHTC----------------TTC-----CH-HHHHTTCEEEEECCSCSCEEECTTC
T ss_pred eccCCCEEEEEeCCCCeEEEEEHHHhcC----------------CCC-----Ch-hhhhcceEecccCCCCceEEECCCC
Confidence 7777766665433333444444321000 000 00 00000 111222345679999999
Q ss_pred CEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC
Q psy8758 131 REFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE 182 (198)
Q Consensus 131 ~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 182 (198)
+++++...++.|.+||..+++........+...+.+++|.++++++++.+..
T Consensus 260 ~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 260 NIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp CEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred CEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 9999988899999999856665443322234578999999999887776543
No 235
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.99 E-value=6.1e-08 Score=68.37 Aligned_cols=145 Identities=7% Similarity=0.051 Sum_probs=89.6
Q ss_pred ceeEEEECCCCceEEE----eeC-------------CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec
Q psy8758 3 HVTHTVWSLDNKFVIS----ASD-------------EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN 65 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~----~~~-------------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 65 (198)
.+++++++|+|++.++ |.. .+.|..+|..+++..... . ......++|+|+++.++++..
T Consensus 132 ~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~---~~~p~gl~~spdg~~lyv~~~ 207 (305)
T 3dr2_A 132 SPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D---LDHPNGLAFSPDEQTLYVSQT 207 (305)
T ss_dssp CCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E---ESSEEEEEECTTSSEEEEEEC
T ss_pred CCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c---CCCCcceEEcCCCCEEEEEec
Confidence 3578999999998875 331 245667776556533222 1 234578999999998877643
Q ss_pred C-----CccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC
Q psy8758 66 E-----DFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK 140 (198)
Q Consensus 66 ~-----d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~ 140 (198)
. .+.|+.|++.... + .. ..... .........++++++|++.++. .+
T Consensus 208 ~~~~~~~~~i~~~~~~~~~-------------------l-----~~-~~~~~--~~~~~~pdgi~~d~~G~lwv~~-~~- 258 (305)
T 3dr2_A 208 PEQGHGSVEITAFAWRDGA-------------------L-----HD-RRHFA--SVPDGLPDGFCVDRGGWLWSSS-GT- 258 (305)
T ss_dssp CC---CCCEEEEEEEETTE-------------------E-----EE-EEEEE--CCSSSCCCSEEECTTSCEEECC-SS-
T ss_pred CCcCCCCCEEEEEEecCCC-------------------c-----cC-CeEEE--ECCCCCCCeEEECCCCCEEEec-CC-
Confidence 3 2567777765320 0 00 00000 1112334568899999955544 44
Q ss_pred cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCC
Q psy8758 141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEM 183 (198)
Q Consensus 141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 183 (198)
.|.+|+. .++....+... ..+.+++|+|+++.|..++.++
T Consensus 259 gv~~~~~-~g~~~~~~~~~--~~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 259 GVCVFDS-DGQLLGHIPTP--GTASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp EEEEECT-TSCEEEEEECS--SCCCEEEECTTSCEEEEEETTE
T ss_pred cEEEECC-CCCEEEEEECC--CceeEEEEeCCCCEEEEEcCCe
Confidence 4999998 45555555333 2588999999998777766554
No 236
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.96 E-value=1.4e-08 Score=76.87 Aligned_cols=168 Identities=11% Similarity=0.117 Sum_probs=102.9
Q ss_pred eEEEECCCCceEEEeeCCC--------------------------------------eEEEEEccC--Cce-eeeeeeee
Q psy8758 5 THTVWSLDNKFVISASDEM--------------------------------------NLRVWKAHA--SEK-LGPIRKVV 43 (198)
Q Consensus 5 ~~~~~s~~~~~l~~~~~d~--------------------------------------~i~i~~~~~--~~~-~~~~~~~~ 43 (198)
..++++|+|+++++.+.+. .|.+.|..+ ++. ...+ .
T Consensus 198 d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~I---p 274 (595)
T 1fwx_A 198 DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYI---P 274 (595)
T ss_dssp CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEE---E
T ss_pred cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEE---e
Confidence 4578899999888877442 356666655 322 1222 2
Q ss_pred ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEE
Q psy8758 44 MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTS 123 (198)
Q Consensus 44 ~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~ 123 (198)
......++.++|||+++++++..+..+.++|+.+....+. +++ +.+ .......+ -......
T Consensus 275 vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~-------------~~l---~~~--~~v~~~v~-vG~gP~h 335 (595)
T 1fwx_A 275 IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFY-------------ENA---DPR--SAVVAEPE-LGLGPLH 335 (595)
T ss_dssp EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHH-------------SCC---CGG--GGEEECCB-CCSCEEE
T ss_pred cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccc-------------ccc---Ccc--cceEEEcC-CCCCcce
Confidence 2345678999999999999988889999999885421110 000 111 12223332 2345678
Q ss_pred EEEccCCCEEEEeecCCcEEEEEcCC----------CceeeEEec----cCcccEEEEEEcCCCCEEEEec---CCCe--
Q psy8758 124 VDYSPTGREFVAGGYDKSLRLYLAHQ----------GHSRDIYHT----KRMQHVTHTVWSLDNKFVISAS---DEMN-- 184 (198)
Q Consensus 124 ~~~sp~~~~l~~~~~d~~v~v~d~~~----------~~~~~~~~~----~~~~~v~~~~~s~~~~~l~~~~---~dg~-- 184 (198)
++|+|+|...++.-.|++|.+||+.. .+.+..+.. +|...-..+.++|||++|+++. .|+.
T Consensus 336 ~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~ 415 (595)
T 1fwx_A 336 TAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLN 415 (595)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCC
T ss_pred EEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcccccc
Confidence 99999994444556799999999987 344444422 1111112235589999998864 3432
Q ss_pred --------EEEEecCCCc
Q psy8758 185 --------LRVWKAHASE 194 (198)
Q Consensus 185 --------v~~w~~~~~~ 194 (198)
-.++|+..++
T Consensus 416 ~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 416 VGPLKPENDQLIDISGDK 433 (595)
T ss_dssp CCSSCCEEEEEEECSSSS
T ss_pred CCCCCCCcceEEEcCCCc
Confidence 2889985544
No 237
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.91 E-value=2.5e-07 Score=73.18 Aligned_cols=161 Identities=12% Similarity=0.136 Sum_probs=91.5
Q ss_pred ceeEEEEC-CCCceEEEeeC-C----CeEEEEEccCC-ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEec
Q psy8758 3 HVTHTVWS-LDNKFVISASD-E----MNLRVWKAHAS-EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDI 75 (198)
Q Consensus 3 ~v~~~~~s-~~~~~l~~~~~-d----~~i~i~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~ 75 (198)
.+...+|| |||++||.+.. + ..|+++|+.++ +.+.. .. ......+.|+||++.++.+. .+..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~--~~--~~~~~~~~WspDg~~l~y~~-~d~~------ 243 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD--KV--SGTNGEIVWGPDHTSLFYVT-KDET------ 243 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC--CE--EEECSCCEECSSTTEEEEEE-ECTT------
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc--cc--cCceeeEEEecCCCEEEEEE-ECCC------
Confidence 35678999 99998885532 2 35999999887 53211 11 11235789999999888864 2210
Q ss_pred cCCCCccccccCceEEEecCCCcEEEEEccCCCc-ceeeec-CCCcceEEEEEccCCCEEEEeec---CCcEEEEEcCCC
Q psy8758 76 RQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNS-PLNVHK-DMTSAVTSVDYSPTGREFVAGGY---DKSLRLYLAHQG 150 (198)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~---d~~v~v~d~~~~ 150 (198)
....+|+.+++.+... ....+. ........+.|||||++|+..+. ...|+++|+.++
T Consensus 244 ------------------~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 244 ------------------LRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp ------------------CCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred ------------------CCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 0001234444433111 112222 22234567899999998876653 447888999876
Q ss_pred c-ee--eEEeccCcccEEEEEEcCCCCEEEEecCC----CeEEEEecCC
Q psy8758 151 H-SR--DIYHTKRMQHVTHTVWSLDNKFVISASDE----MNLRVWKAHA 192 (198)
Q Consensus 151 ~-~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~~d----g~v~~w~~~~ 192 (198)
. .. ..+.........++.|+.++.+++....+ ..|..+++.+
T Consensus 306 ~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 306 NAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp TTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 3 12 22222333455666665544444444333 3677777764
No 238
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.91 E-value=6.8e-07 Score=66.18 Aligned_cols=156 Identities=6% Similarity=0.063 Sum_probs=97.7
Q ss_pred ceeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc----cEEEEeccC
Q psy8758 3 HVTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF----NLYSYDIRQ 77 (198)
Q Consensus 3 ~v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~----~i~~~d~~~ 77 (198)
....++++| ++..|+.+...+.|+.+|+..+.. ..+.. .......++|+++++.++++...++ .+...+...
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v-~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV-STVYS--GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE-EEEEC--CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE-EEEec--CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 346889998 455666665557888999876543 23222 2345789999999997777643222 122222211
Q ss_pred CCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-CCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758 78 LNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGHSRDIY 156 (198)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 156 (198)
. ......+.. ......++++| ++.++++-..++.|..++...+......
T Consensus 215 ~-----------------------------~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~ 264 (430)
T 3tc9_A 215 G-----------------------------FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLF 264 (430)
T ss_dssp T-----------------------------SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred c-----------------------------eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 0 010111111 22356788999 6776666667889999999877653333
Q ss_pred eccCcccEEEEEEcCCCCEE-EEecCCCeEEEEecC
Q psy8758 157 HTKRMQHVTHTVWSLDNKFV-ISASDEMNLRVWKAH 191 (198)
Q Consensus 157 ~~~~~~~v~~~~~s~~~~~l-~~~~~dg~v~~w~~~ 191 (198)
..+.......++|+|+|++| ++-...+.|..++.+
T Consensus 265 ~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 265 TIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp ECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 23333457899999999954 455567889998765
No 239
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.89 E-value=1.9e-06 Score=60.76 Aligned_cols=182 Identities=8% Similarity=0.032 Sum_probs=107.8
Q ss_pred eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCc-cEEEEeccCCCCc-
Q psy8758 4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDF-NLYSYDIRQLNSP- 81 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~-~i~~~d~~~~~~~- 81 (198)
...++|+++|+++++-...+.|..||.... ....+ .....+..+++.++++.+++....++ .+..+|..+....
T Consensus 34 pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~---~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA---TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE---ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred cceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE---eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 467899999986666667889999987543 22222 22345788999999986554322222 4666665443211
Q ss_pred cc-------------cccCceEEEecCCCcEEEEEccCCCcceeee---------cCCCcceEEEEEccCCCEEEEe-ec
Q psy8758 82 LN-------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVH---------KDMTSAVTSVDYSPTGREFVAG-GY 138 (198)
Q Consensus 82 ~~-------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~---------~~~~~~i~~~~~sp~~~~l~~~-~~ 138 (198)
+. ......+++-..++.|+.+|.......+... ...-...+.+ +|+++.|..+ ..
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 00 0111234444467888888876411111100 0111234555 8888766554 45
Q ss_pred CCcEEEEEcCC-Cce--eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 139 DKSLRLYLAHQ-GHS--RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 139 d~~v~v~d~~~-~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
.+.|..|++.. ++. ...+... .....++++++|+++++....+.|.+++.. |+
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~~~--~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~ 243 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFVEQ--TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RS 243 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEES--CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CC
T ss_pred CCEEEEEEeCCCCCCCccEEEecc--CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CC
Confidence 78999999875 332 1222111 345678999999987777777889999875 44
No 240
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.88 E-value=1.7e-07 Score=73.21 Aligned_cols=79 Identities=15% Similarity=0.077 Sum_probs=59.1
Q ss_pred CcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEE
Q psy8758 97 FNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFV 176 (198)
Q Consensus 97 ~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 176 (198)
+.|..||+.+ ++.+..+. +..+.....+..++..++.++.|+.+++||..+++.+..+..++.....-+.|.++|+.+
T Consensus 457 g~l~A~D~~t-G~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~ 534 (677)
T 1kb0_A 457 GRLLAWDPVA-QKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQY 534 (677)
T ss_dssp EEEEEEETTT-TEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred cEEEEEeCCC-CcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEE
Confidence 7799999988 66666654 233445566777888888899999999999999999988866654444556777888744
Q ss_pred E
Q psy8758 177 I 177 (198)
Q Consensus 177 ~ 177 (198)
+
T Consensus 535 v 535 (677)
T 1kb0_A 535 V 535 (677)
T ss_dssp E
T ss_pred E
Confidence 3
No 241
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.87 E-value=7.8e-07 Score=64.47 Aligned_cols=180 Identities=10% Similarity=0.030 Sum_probs=106.2
Q ss_pred CCceEEEeeCCCeEEEEEccCCceeeeeeeeee-------cCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccc
Q psy8758 12 DNKFVISASDEMNLRVWKAHASEKLGPIRKVVM-------SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNV 84 (198)
Q Consensus 12 ~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~ 84 (198)
.+..+++++.++.|..+|..+++.......... ...+.. ....++..+++ ++.++.+..+|..+.+.....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v-~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYI-GSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEE-EETTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEE-EcCCCEEEEEECCCCCEEEEE
Confidence 345677788889999999998886544433110 111211 11223455555 457889999998765533221
Q ss_pred -----------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcce-----EEEEEccCCCEEEEeecCCcEEEEEcC
Q psy8758 85 -----------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAV-----TSVDYSPTGREFVAGGYDKSLRLYLAH 148 (198)
Q Consensus 85 -----------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i-----~~~~~sp~~~~l~~~~~d~~v~v~d~~ 148 (198)
..+..++.++.++.+..+|.++ ++.+.......... ...... +..++.+..++.+..+|..
T Consensus 130 ~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~t-G~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~ 206 (376)
T 3q7m_A 130 KVAGEALSRPVVSDGLVLIHTSNGQLQALNEAD-GAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLME 206 (376)
T ss_dssp ECSSCCCSCCEEETTEEEEECTTSEEEEEETTT-CCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETT
T ss_pred eCCCceEcCCEEECCEEEEEcCCCeEEEEECCC-CcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECC
Confidence 1123577788899999999987 66665554322111 112222 4567778889999999999
Q ss_pred CCceeeEEeccCccc------EEEEEEcC--CCCEEEEecCCCeEEEEecCCCccc
Q psy8758 149 QGHSRDIYHTKRMQH------VTHTVWSL--DNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 149 ~~~~~~~~~~~~~~~------v~~~~~s~--~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+++.+.......... +..+.-.| .+..++.++.++.+..+|.++|+.+
T Consensus 207 tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~ 262 (376)
T 3q7m_A 207 QGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIM 262 (376)
T ss_dssp TCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEE
T ss_pred CCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEE
Confidence 998876653221100 00011111 2345566667788888888887754
No 242
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.86 E-value=1.6e-06 Score=62.79 Aligned_cols=172 Identities=10% Similarity=-0.014 Sum_probs=104.6
Q ss_pred eEEEeeCCCeEEEEEccCCceeeeeeeeeecC---ceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccc------
Q psy8758 15 FVISASDEMNLRVWKAHASEKLGPIRKVVMSL---RSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVH------ 85 (198)
Q Consensus 15 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~------ 85 (198)
.++.++.++.+..+|..+++............ ........ +..+++ +..++.+..+|..+........
T Consensus 145 ~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~-g~~~g~l~~~d~~tG~~~w~~~~~~~~~ 221 (376)
T 3q7m_A 145 LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVV-GGDNGRVSAVLMEQGQMIWQQRISQATG 221 (376)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEE-CCTTTEEEEEETTTCCEEEEEECCC---
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEE-EcCCCEEEEEECCCCcEEEEEecccCCC
Confidence 55666677778888877776544433211000 00111121 334444 4578888888886554322110
Q ss_pred ----------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCC
Q psy8758 86 ----------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQ 149 (198)
Q Consensus 86 ----------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~ 149 (198)
.+..+..++.++.+..+|.++ ++.+..... .....+.. ++..+..++.++.+..+|..+
T Consensus 222 ~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~t-G~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~t 296 (376)
T 3q7m_A 222 STEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRS-GQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDG 296 (376)
T ss_dssp --------CCCCCCEEETTEEEEECTTSCEEEEETTT-CCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTT
T ss_pred CcccccccccCCCcEEECCEEEEEecCcEEEEEECCC-CcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCC
Confidence 123467777899999999987 565554432 22334443 366777888899999999999
Q ss_pred CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
++.+..........+..+.. .+..|+.++.+|.++.+|.++|+.+
T Consensus 297 G~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 297 GVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp CCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred CcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEE
Confidence 98876653122222222222 2456777888999999999998865
No 243
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.85 E-value=4.2e-07 Score=71.20 Aligned_cols=180 Identities=16% Similarity=0.068 Sum_probs=114.5
Q ss_pred CceEEEeeCCCeEEEEEccCCceeeeeeeeeecC--------ce-eeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc
Q psy8758 13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSL--------RS-NMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN 83 (198)
Q Consensus 13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~--------~v-~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~ 83 (198)
+..+++++.++.|..+|..+++..-.+....... .+ ..+.. .+..+++ ++.|+.+..+|.++.+....
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v-~~~dg~l~AlDa~TG~~~W~ 146 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYV-GVLDGRLEAIDAKTGQRAWS 146 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEE-ECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEE-EccCCEEEEEECCCCCEeee
Confidence 4467777788899999999998765554321100 00 11222 3455655 46789999999876654322
Q ss_pred ccc-----------------CceEEEec------CCCcEEEEEccCCCcceeeecCCC----------------------
Q psy8758 84 VHK-----------------DMTSAAAN------EDFNLYSYDIRQLNSPLNVHKDMT---------------------- 118 (198)
Q Consensus 84 ~~~-----------------~~~~~~~~------~~~~i~~~d~~~~~~~~~~~~~~~---------------------- 118 (198)
... +..++.+. .++.|+.||.++ ++.+..+....
T Consensus 147 ~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~t-G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 225 (689)
T 1yiq_A 147 VDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAET-GKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGD 225 (689)
T ss_dssp EECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTT-CCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSS
T ss_pred ecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCC-CcEEEEecccCCCcccccccccccccccccCCc
Confidence 110 12233332 368999999998 66665543110
Q ss_pred ---------cceEEEEEccCCCEEEEeecCC-------------------cEEEEEcCCCceeeEEecc-Cc-------c
Q psy8758 119 ---------SAVTSVDYSPTGREFVAGGYDK-------------------SLRLYLAHQGHSRDIYHTK-RM-------Q 162 (198)
Q Consensus 119 ---------~~i~~~~~sp~~~~l~~~~~d~-------------------~v~v~d~~~~~~~~~~~~~-~~-------~ 162 (198)
.....++++|++..++.+..++ .|..+|..+|+.+..+... |. .
T Consensus 226 ~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~ 305 (689)
T 1yiq_A 226 AYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQ 305 (689)
T ss_dssp THHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCS
T ss_pred eeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCC
Confidence 0112578899888888887775 3999999999998776432 21 1
Q ss_pred cEEEEEEcCCCC---EEEEecCCCeEEEEecCCCccc
Q psy8758 163 HVTHTVWSLDNK---FVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 163 ~v~~~~~s~~~~---~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
.+.-.....+|+ .++.++.+|.++++|.++|+.+
T Consensus 306 ~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 306 HMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred CcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence 222222233565 7888999999999999999976
No 244
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.82 E-value=8.8e-10 Score=79.99 Aligned_cols=133 Identities=14% Similarity=0.088 Sum_probs=69.3
Q ss_pred CCCeEEEEecCCccEEEEeccCCCCcccc-----------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCc-ceE-
Q psy8758 56 MEAFVFTAANEDFNLYSYDIRQLNSPLNV-----------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS-AVT- 122 (198)
Q Consensus 56 ~~~~~~~~~~~d~~i~~~d~~~~~~~~~~-----------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~i~- 122 (198)
++..+++ ++.|+.+..||..+.+..... ..+.++++++.|+.++.||..+ ++.+..+..+.. .+.
T Consensus 8 ~~~~v~~-gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~t-G~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFV-STLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVEEPAFLPDPNDGSLYTLGSKN-NEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEE-EETTSEEEEEETTTCCEEEEEECCCSCCCC-----CCEEECTTTCCEEEC------CCSEECSCCHHHHHTT
T ss_pred eCCEEEE-EcCCCEEEEEECCCCCEEEEecCCCceecceEcCCCEEEEeCCCCEEEEEECCC-CceeeeeeccCcccccc
Confidence 3556655 467889999998765533221 1223577778999999999987 555544433211 110
Q ss_pred EEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 123 SVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 123 ~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+..+. ++..+++++.++.++.||..+|+.+..+... . ...++|++..+++++.|+.|+.||.++|+.+
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~--~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~ 153 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSA--F---ADSLSPSTSLLYLGRTEYTITMYDTKTRELR 153 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCC
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCC--C---cccccccCCEEEEEecCCEEEEEECCCCCEE
Confidence 11111 3456778888999999999999987766322 1 2356778888888999999999999999875
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.81 E-value=7.1e-07 Score=69.67 Aligned_cols=171 Identities=9% Similarity=0.038 Sum_probs=109.7
Q ss_pred CCeEEEEEccCCceeeeeeeeee-----------------------------cCceeeEEeCCCCCeEEEEecCCc----
Q psy8758 22 EMNLRVWKAHASEKLGPIRKVVM-----------------------------SLRSNMVSWNPMEAFVFTAANEDF---- 68 (198)
Q Consensus 22 d~~i~i~~~~~~~~~~~~~~~~~-----------------------------~~~v~~~~~~~~~~~~~~~~~~d~---- 68 (198)
+|.|..+|..+++..-.+..... ......+++.|+...+++. ..++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~-~~~g~~w~ 255 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVG-TGNGSPWN 255 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEE-CCCEESSC
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEe-CCCCCccc
Confidence 58999999999987655543110 0011246777777777654 4444
Q ss_pred ---------------cEEEEeccCCCCcccccc-------------------------CceEEEecCCCcEEEEEccCCC
Q psy8758 69 ---------------NLYSYDIRQLNSPLNVHK-------------------------DMTSAAANEDFNLYSYDIRQLN 108 (198)
Q Consensus 69 ---------------~i~~~d~~~~~~~~~~~~-------------------------~~~~~~~~~~~~i~~~d~~~~~ 108 (198)
.|..+|.++.+....... ...++.++.+|.++++|.++ +
T Consensus 256 ~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G 334 (668)
T 1kv9_A 256 REVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTN-G 334 (668)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT-C
T ss_pred cCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCC-C
Confidence 388888776654322110 01477888999999999988 5
Q ss_pred cceeeecCCC------------cc------------------------eEEEEEccCCCEEEEe----------------
Q psy8758 109 SPLNVHKDMT------------SA------------------------VTSVDYSPTGREFVAG---------------- 136 (198)
Q Consensus 109 ~~~~~~~~~~------------~~------------------------i~~~~~sp~~~~l~~~---------------- 136 (198)
+.+...+... .+ -..++++|+...++..
T Consensus 335 ~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~ 414 (668)
T 1kv9_A 335 KLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFV 414 (668)
T ss_dssp CEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCC
T ss_pred CEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccc
Confidence 6553221111 00 1126788876655431
Q ss_pred --------------------ecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 137 --------------------GYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 137 --------------------~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
..++.|.-||+.+++.+.....+ .......+...+.+++.++.|+.++.||.++|+.+
T Consensus 415 ~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~--~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 415 TRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP--THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp CCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES--SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC--CCCcCceeEeCCCEEEEECCcccchhhhhhcChhh
Confidence 12378999999999987766332 23333445556778888999999999999999876
No 246
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.81 E-value=7.7e-06 Score=56.40 Aligned_cols=177 Identities=2% Similarity=-0.059 Sum_probs=106.5
Q ss_pred CceEEEeeCCCeEEEEEccCCcee----eeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc--ccc--
Q psy8758 13 NKFVISASDEMNLRVWKAHASEKL----GPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--LNV-- 84 (198)
Q Consensus 13 ~~~l~~~~~d~~i~i~~~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--~~~-- 84 (198)
|.+|+.+.. +.|+.+++...... ..+... ....+..++|+|++..++.+....+.|..++....... ...
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~-~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHI-PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEE-EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecC-CCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence 345555554 47888888654321 111111 12346789999988888887667789999998654321 100
Q ss_pred ----------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec---CCcEEEEEcCCCc
Q psy8758 85 ----------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY---DKSLRLYLAHQGH 151 (198)
Q Consensus 85 ----------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~---d~~v~v~d~~~~~ 151 (198)
..+.++++-...+.|..+++.. ................++++|++..|..+.. .+.|..+++....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g-~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~ 157 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG-TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN 157 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCC-CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC
Confidence 1123444555566777777764 2221222222245789999997665555443 3688888876533
Q ss_pred eeeEEeccCcccEEEEEEcCCCCEEE-EecCCCeEEEEecCCC
Q psy8758 152 SRDIYHTKRMQHVTHTVWSLDNKFVI-SASDEMNLRVWKAHAS 193 (198)
Q Consensus 152 ~~~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~v~~w~~~~~ 193 (198)
. ..+..........++++|++..|+ +-...+.|.++++...
T Consensus 158 ~-~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 158 R-RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp C-EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred c-EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 2 222222235678999999876554 4456789999998754
No 247
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.75 E-value=2e-06 Score=65.94 Aligned_cols=56 Identities=13% Similarity=0.043 Sum_probs=40.4
Q ss_pred CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 139 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 139 d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
++.|..||+.+++.+.....+ ..+........+..++.++.||.++.+|.++|+++
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~--~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK--FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCeEEEEECCCCCEEEEecCC--CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 478999999999887776332 22222223334566777889999999999999976
No 248
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.73 E-value=8e-06 Score=57.93 Aligned_cols=156 Identities=9% Similarity=0.018 Sum_probs=95.9
Q ss_pred eeEEEECC-CCceEEEeeC-----------------CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec
Q psy8758 4 VTHTVWSL-DNKFVISASD-----------------EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN 65 (198)
Q Consensus 4 v~~~~~s~-~~~~l~~~~~-----------------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 65 (198)
.+.+++.+ +|++.++-.. ++.|..+|..+++....... ......++|+|+++.++++-.
T Consensus 128 p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~---~~~p~gia~~~dg~~lyv~d~ 204 (322)
T 2fp8_A 128 LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE---LHVPGGAEVSADSSFVLVAEF 204 (322)
T ss_dssp EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE---ESCCCEEEECTTSSEEEEEEG
T ss_pred cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC---CccCcceEECCCCCEEEEEeC
Confidence 57789999 8886665322 36688888765543222221 233568999999998877655
Q ss_pred CCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-------
Q psy8758 66 EDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY------- 138 (198)
Q Consensus 66 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~------- 138 (198)
..+.|..+++.... .+.. +.... ... ...+++.++|++.++...
T Consensus 205 ~~~~I~~~~~~~~~----------------~~~~---------~~~~~---~~g-P~gi~~d~~G~l~va~~~~~~~~~~ 255 (322)
T 2fp8_A 205 LSHQIVKYWLEGPK----------------KGTA---------EVLVK---IPN-PGNIKRNADGHFWVSSSEELDGNMH 255 (322)
T ss_dssp GGTEEEEEESSSTT----------------TTCE---------EEEEE---CSS-EEEEEECTTSCEEEEEEEETTSSTT
T ss_pred CCCeEEEEECCCCc----------------CCcc---------ceEEe---CCC-CCCeEECCCCCEEEEecCccccccc
Confidence 56788888876421 0001 11111 122 677899999987766544
Q ss_pred ---CCcEEEEEcCCCceeeEEeccC---cccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758 139 ---DKSLRLYLAHQGHSRDIYHTKR---MQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS 193 (198)
Q Consensus 139 ---d~~v~v~d~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~ 193 (198)
.+.|..+|.. ++.+..+.... ...+..+++ .+++++++...++.|..+++...
T Consensus 256 ~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 256 GRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp SCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred CCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 4668888864 66555553322 234666666 46777777667889999998644
No 249
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.72 E-value=2.5e-05 Score=57.01 Aligned_cols=187 Identities=4% Similarity=-0.052 Sum_probs=112.0
Q ss_pred ceeEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 3 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
....++|++.+..|+.. ...+.|+.+++........+.. .......+++.+.+..|+.+-...+.|.+.++......
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~--~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST--GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 194 (386)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECS--SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCE
T ss_pred ccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC--CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceE
Confidence 45678999765555544 4667888888865542222211 12235678999877888777666778888887643321
Q ss_pred cc--------------cccCceEEEecCC-CcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEe-ecCCcEEE
Q psy8758 82 LN--------------VHKDMTSAAANED-FNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAG-GYDKSLRL 144 (198)
Q Consensus 82 ~~--------------~~~~~~~~~~~~~-~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~-~~d~~v~v 144 (198)
.. ...+.++++-... +.|..+++.. .....+ ...-...+.|+++|++..|..+ ...+.|..
T Consensus 195 ~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG--~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~ 272 (386)
T 3v65_B 195 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 272 (386)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred EeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC--CCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEE
Confidence 11 0112233333333 5666666653 222222 2333457899999876666554 45678999
Q ss_pred EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
+|+......... .........+++ .++.++.+-...+.|..++..+|+.
T Consensus 273 ~d~dG~~~~~~~-~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 273 ANLDGSHRKAVI-SQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKN 321 (386)
T ss_dssp ECTTSCSCEEEE-CSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred EeCCCCeeEEEE-ECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcc
Confidence 998754433333 233345677888 4455556666778898888666654
No 250
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.69 E-value=6.6e-06 Score=58.38 Aligned_cols=158 Identities=11% Similarity=0.021 Sum_probs=94.2
Q ss_pred eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee------------------eecCceeeEEeCCCCCeEEEEec
Q psy8758 4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV------------------VMSLRSNMVSWNPMEAFVFTAAN 65 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~------------------~~~~~v~~~~~~~~~~~~~~~~~ 65 (198)
..+++|+++|++++++..++.|..|+..+++. ..+... .....+..+++.+++..++++.
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d- 98 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD- 98 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE-
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE-
Confidence 46789999999788888889999998765442 222110 0012457788887333444432
Q ss_pred CCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecC-CCcceEEEEEcc-CCCEEEEeec-----
Q psy8758 66 EDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD-MTSAVTSVDYSP-TGREFVAGGY----- 138 (198)
Q Consensus 66 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~i~~~~~sp-~~~~l~~~~~----- 138 (198)
....+..+|..... +..+- ....+ .......+++.| +|++.++...
T Consensus 99 ~~~~i~~~d~~~g~-------------------~~~~~--------~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~ 151 (322)
T 2fp8_A 99 CYYHLSVVGSEGGH-------------------ATQLA--------TSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDD 151 (322)
T ss_dssp TTTEEEEECTTCEE-------------------CEEEE--------SEETTEECSCEEEEEECTTTCCEEEEESCSSCCT
T ss_pred CCCCEEEEeCCCCE-------------------EEEec--------ccCCCCcccccceEEEecCCCEEEEECCcccccc
Confidence 33446666644210 00000 00000 112367799999 8886666432
Q ss_pred ------------CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCC
Q psy8758 139 ------------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHA 192 (198)
Q Consensus 139 ------------d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~ 192 (198)
++.|..+|..+++....... ......++|+|++++|+.+ ..++.|.++++..
T Consensus 152 ~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 152 RGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE--LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp TCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE--ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred cccceehcccCCCceEEEEeCCCCEEEEeccC--CccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 36788888877765433211 1345678999999865544 5668999999875
No 251
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.69 E-value=2.9e-06 Score=66.26 Aligned_cols=180 Identities=13% Similarity=0.080 Sum_probs=113.8
Q ss_pred CceEEEeeCCCeEEEEEccCCceeeeeeeeeecC--------ce-eeEEeCCCCCeEEEEecCCccEEEEeccCCCCccc
Q psy8758 13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSL--------RS-NMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLN 83 (198)
Q Consensus 13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~--------~v-~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~ 83 (198)
+..+++++.++.|..+|..+++.+-.+....... .+ ..+.+ .+..+++ ++.|+.+..+|..+.+....
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v-~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYV-GTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEE-ECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEE-EcCCCEEEEEECCCCCEeee
Confidence 4466777788899999999998765553321100 00 11222 2445555 45789999999876653322
Q ss_pred ccc----------------CceEEEecC------CCcEEEEEccCCCcceeeecCC---C--------------------
Q psy8758 84 VHK----------------DMTSAAANE------DFNLYSYDIRQLNSPLNVHKDM---T-------------------- 118 (198)
Q Consensus 84 ~~~----------------~~~~~~~~~------~~~i~~~d~~~~~~~~~~~~~~---~-------------------- 118 (198)
... +..++.+.. ++.|..+|.++ ++.+..+... .
T Consensus 143 ~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~t-G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~ 221 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADT-GKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQ 221 (668)
T ss_dssp EECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTT-CCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSC
T ss_pred eccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCC-CcEEEEecccCCCCCccccccccccccccCCccc
Confidence 110 122333332 58999999988 6666555321 0
Q ss_pred --------cceEEEEEccCCCEEEEeecCC-------------------cEEEEEcCCCceeeEEecc-Cc-------cc
Q psy8758 119 --------SAVTSVDYSPTGREFVAGGYDK-------------------SLRLYLAHQGHSRDIYHTK-RM-------QH 163 (198)
Q Consensus 119 --------~~i~~~~~sp~~~~l~~~~~d~-------------------~v~v~d~~~~~~~~~~~~~-~~-------~~ 163 (198)
.....++++|+...++.+..++ .|.-+|..+++.+..+... |. .+
T Consensus 222 ~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~ 301 (668)
T 1kv9_A 222 YWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQ 301 (668)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCC
Confidence 0112468888888888877665 4999999999998877443 21 22
Q ss_pred EEEEEEcCCCC---EEEEecCCCeEEEEecCCCccc
Q psy8758 164 VTHTVWSLDNK---FVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 164 v~~~~~s~~~~---~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
..-..+..+|+ .++.++.+|.++++|..+|+.+
T Consensus 302 ~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 302 ITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred cEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 22233334665 6888999999999999999876
No 252
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.64 E-value=2.5e-06 Score=66.48 Aligned_cols=187 Identities=8% Similarity=0.009 Sum_probs=105.9
Q ss_pred EEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC-----ccEEEEeccCCC
Q psy8758 6 HTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED-----FNLYSYDIRQLN 79 (198)
Q Consensus 6 ~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~ 79 (198)
++++.++++.++.|+ .+..+.+||..+.+-. .+........-.+++..++++.++..|..+ ..+.+||..+..
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~-~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWI-PGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEE-ECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCcee-ECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 467778999998888 4568999999876432 222111111123455667887776654233 568899986543
Q ss_pred Ccc---------cc--------ccCceEEEecCC---------CcEEEEEccCCCcceeeecCCC---------cceEEE
Q psy8758 80 SPL---------NV--------HKDMTSAAANED---------FNLYSYDIRQLNSPLNVHKDMT---------SAVTSV 124 (198)
Q Consensus 80 ~~~---------~~--------~~~~~~~~~~~~---------~~i~~~d~~~~~~~~~~~~~~~---------~~i~~~ 124 (198)
-.. .. ..+.+++.++.+ ..+..||.... ........+. ..-.++
T Consensus 326 W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~-~w~~~~~~~~~~~~~~~~~~~~~av 404 (656)
T 1k3i_A 326 WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS-GDVKSAGKRQSNRGVAPDAMCGNAV 404 (656)
T ss_dssp EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTT-CEEEEEEECEETTEECCCCBTCEEE
T ss_pred ceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCc-ceeecCCccccccccCCCCCCCceE
Confidence 111 00 222334445443 35677887762 2222221111 123444
Q ss_pred EEcc-CCCEEEEeecCC-----------cEEEEEcCCCceeeEE--eccCcccEEEEEEcCCCCEEEEecCC--------
Q psy8758 125 DYSP-TGREFVAGGYDK-----------SLRLYLAHQGHSRDIY--HTKRMQHVTHTVWSLDNKFVISASDE-------- 182 (198)
Q Consensus 125 ~~sp-~~~~l~~~~~d~-----------~v~v~d~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~~~~~d-------- 182 (198)
.|.. +++.++.|+.++ .+.+||..+....... .......-.++...|++++++.|+.+
T Consensus 405 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~ 484 (656)
T 1k3i_A 405 MYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDS 484 (656)
T ss_dssp EEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCC
T ss_pred eccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCC
Confidence 4543 677888887542 6778888776654432 11111122345667899999888754
Q ss_pred ---CeEEEEecCCCc
Q psy8758 183 ---MNLRVWKAHASE 194 (198)
Q Consensus 183 ---g~v~~w~~~~~~ 194 (198)
..+.+||..+.+
T Consensus 485 ~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 485 TPVFTPEIYVPEQDT 499 (656)
T ss_dssp SBCCCCEEEEGGGTE
T ss_pred CcccceEEEcCCCCc
Confidence 468999987654
No 253
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.62 E-value=9.3e-06 Score=57.45 Aligned_cols=175 Identities=13% Similarity=0.070 Sum_probs=106.9
Q ss_pred eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc---
Q psy8758 5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP--- 81 (198)
Q Consensus 5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~--- 81 (198)
.++...++++ +..++.++.+..+|.. ++....+.. ....+.++...+++...+. + +.+..+| .+....
T Consensus 140 ~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~--~~~~~~~~~~d~~g~l~v~--t--~~l~~~d-~~g~~~~~~ 210 (330)
T 3hxj_A 140 ATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKT--NDAITSAASIGKDGTIYFG--S--DKVYAIN-PDGTEKWNF 210 (330)
T ss_dssp SCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEEC--SSCCCSCCEECTTCCEEEE--S--SSEEEEC-TTSCEEEEE
T ss_pred eeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEec--CCCceeeeEEcCCCEEEEE--e--CEEEEEC-CCCcEEEEE
Confidence 4455566666 5557777899999987 654433332 2344667777777765543 3 7788888 432211
Q ss_pred ---------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce
Q psy8758 82 ---------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS 152 (198)
Q Consensus 82 ---------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~ 152 (198)
+....+..+..++.++.+..+|.. +..+..+......+..+.+.+++. |..++.++.+..+|. +++.
T Consensus 211 ~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~--g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~ 286 (330)
T 3hxj_A 211 YAGYWTVTRPAISEDGTIYVTSLDGHLYAINPD--GTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTE 286 (330)
T ss_dssp CCSSCCCSCCEECTTSCEEEEETTTEEEEECTT--SCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCE
T ss_pred ccCCcceeceEECCCCeEEEEcCCCeEEEECCC--CCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC-CCcE
Confidence 111223356677778888888753 455555544444445566666664 556677888999996 6666
Q ss_pred eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 153 RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 153 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
...+.. ....+.++...++|++++ ++.+|.+++...+..+
T Consensus 287 ~~~~~~-~~~~~~~~~~d~~g~l~~-gt~~G~~~~~~~~~~~ 326 (330)
T 3hxj_A 287 KWNFET-GSWIIATPVIDENGTIYF-GTRNGKFYALFNLEHH 326 (330)
T ss_dssp EEEEEC-SSCCCSCCEECTTCCEEE-ECTTSCEEEEEC----
T ss_pred EEEEEc-CCccccceEEcCCCEEEE-EcCCCeEEEEeccccc
Confidence 555432 335566777778887554 7789999988776543
No 254
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.61 E-value=2.5e-07 Score=66.94 Aligned_cols=92 Identities=5% Similarity=-0.147 Sum_probs=69.0
Q ss_pred cEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee----------cCCcEEEEEcCCCceeeEEeccC------c
Q psy8758 98 NLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG----------YDKSLRLYLAHQGHSRDIYHTKR------M 161 (198)
Q Consensus 98 ~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~----------~d~~v~v~d~~~~~~~~~~~~~~------~ 161 (198)
.+.++|..+ .+.+..+.....+ .+.++||+++++++. .++.|.+||+.+++....+..+. .
T Consensus 47 ~vsvID~~t-~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 47 ENWVSCAGC-GVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEEEETTT-TEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred eEEEEECCC-CeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 555666655 5777777655555 799999999888876 36889999999999988874331 1
Q ss_pred ccEEEEEEcCCCCEEEEecC--CCeEEE--EecCC
Q psy8758 162 QHVTHTVWSLDNKFVISASD--EMNLRV--WKAHA 192 (198)
Q Consensus 162 ~~v~~~~~s~~~~~l~~~~~--dg~v~~--w~~~~ 192 (198)
.....++++|||++++.+.. ++.+.+ +|+.+
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 23567899999998887754 467888 88865
No 255
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.59 E-value=9.4e-06 Score=55.53 Aligned_cols=134 Identities=9% Similarity=0.099 Sum_probs=87.2
Q ss_pred CCCCceEEEee-CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCc
Q psy8758 10 SLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDM 88 (198)
Q Consensus 10 s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~ 88 (198)
.++++.|+... .++.+.+||..+.+....+... . ....+++++..++.+ +.++.|.++|..+.
T Consensus 93 t~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~---~--eG~glt~dg~~L~~S-dGs~~i~~iDp~T~---------- 156 (262)
T 3nol_A 93 SDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYD---G--EGWGLTHNDQYLIMS-DGTPVLRFLDPESL---------- 156 (262)
T ss_dssp EEETTEEEEEESSSSEEEEEETTTCCEEEEEECS---S--CCCCEEECSSCEEEC-CSSSEEEEECTTTC----------
T ss_pred EEeCCEEEEEEeeCCEEEEEECccCcEEEEEECC---C--CceEEecCCCEEEEE-CCCCeEEEEcCCCC----------
Confidence 33455555544 5789999999988877666542 2 223344567777765 34677888887653
Q ss_pred eEEEecCCCcEEEEEccCCCcceeeecC--CC---cceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEecc----
Q psy8758 89 TSAAANEDFNLYSYDIRQLNSPLNVHKD--MT---SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK---- 159 (198)
Q Consensus 89 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~---~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~---- 159 (198)
+.+..+.- .. ..++.+.|. +|+..+..-.++.|.+.|..+++.+..+...
T Consensus 157 --------------------~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~ 215 (262)
T 3nol_A 157 --------------------TPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILA 215 (262)
T ss_dssp --------------------SEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGG
T ss_pred --------------------eEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCcc
Confidence 33333321 11 334567776 7776666667889999999999998877332
Q ss_pred -------CcccEEEEEEcCCCCEEEEec
Q psy8758 160 -------RMQHVTHTVWSLDNKFVISAS 180 (198)
Q Consensus 160 -------~~~~v~~~~~s~~~~~l~~~~ 180 (198)
.....+.++|+|+++.|+..+
T Consensus 216 ~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 216 EAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp GSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 123568999999877655544
No 256
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.57 E-value=6.6e-05 Score=54.01 Aligned_cols=187 Identities=4% Similarity=-0.046 Sum_probs=111.9
Q ss_pred ceeEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 3 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
....++|++.+..|+.. ...+.|+.+++........+.. .......+++.+.+..++.+-...+.|.+.++......
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~--~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST--GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK 151 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS--SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred ceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC--CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE
Confidence 35788999766555544 4567888888875542222211 12335688998877777777666788988887643321
Q ss_pred ccc--------------ccCceEEEecCC-CcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEe-ecCCcEEE
Q psy8758 82 LNV--------------HKDMTSAAANED-FNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAG-GYDKSLRL 144 (198)
Q Consensus 82 ~~~--------------~~~~~~~~~~~~-~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~-~~d~~v~v 144 (198)
... ..+.++.+-... +.|...++.. .....+ ...-...+.++++|++..|..+ ...+.|..
T Consensus 152 ~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG--~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~ 229 (349)
T 3v64_C 152 VLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG--SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 229 (349)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC--CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEE
Confidence 110 112233343333 5666666653 222222 2233457899999877666554 45678999
Q ss_pred EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
+|+......... .........+++ .++..+.+-...+.|..++..+|+.
T Consensus 230 ~~~dG~~~~~~~-~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 230 ANLDGSHRKAVI-SQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp EETTSCSCEEEE-CSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCS
T ss_pred EeCCCCceEEEE-eCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCc
Confidence 998754433333 233345677888 3455555666678888888656553
No 257
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.56 E-value=9.8e-06 Score=62.28 Aligned_cols=56 Identities=14% Similarity=0.121 Sum_probs=39.9
Q ss_pred CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 139 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 139 d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
++.|.-||+.+++.+.....+ .++..-.....+.+++.++.||.++.||.++|+++
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH--LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES--SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cceEEEEECCCCCEEEEecCC--CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEE
Confidence 578999999999887765332 22222112224567777899999999999999986
No 258
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.55 E-value=8.2e-06 Score=62.84 Aligned_cols=56 Identities=13% Similarity=0.062 Sum_probs=39.0
Q ss_pred CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 139 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 139 d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
++.+.-||+.+++.+.....+ .+...-.....+.+++.++.|+.++.||.++|+++
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~--~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMER--FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEES--SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred cCeEEEEECCCCCEEeEecCC--CCccCcceEecCCEEEEECCCCeEEEEECCCCCEE
Confidence 467888999998887765322 12221112234567777899999999999999986
No 259
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.55 E-value=2.2e-05 Score=53.81 Aligned_cols=132 Identities=6% Similarity=-0.023 Sum_probs=86.5
Q ss_pred CCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCce
Q psy8758 11 LDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMT 89 (198)
Q Consensus 11 ~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 89 (198)
++++.|+.. -.++.+.+||..+.+....+... ..-..++ ++++.++.+ ..++.|.++|..+.
T Consensus 103 ~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~---~eGwGLt--~Dg~~L~vS-dGs~~l~~iDp~T~----------- 165 (268)
T 3nok_A 103 SDGERLYQLTWTEGLLFTWSGMPPQRERTTRYS---GEGWGLC--YWNGKLVRS-DGGTMLTFHEPDGF----------- 165 (268)
T ss_dssp ECSSCEEEEESSSCEEEEEETTTTEEEEEEECS---SCCCCEE--EETTEEEEE-CSSSEEEEECTTTC-----------
T ss_pred EeCCEEEEEEccCCEEEEEECCcCcEEEEEeCC---CceeEEe--cCCCEEEEE-CCCCEEEEEcCCCC-----------
Confidence 344444444 36789999999988877766542 2223443 567888776 45778888887763
Q ss_pred EEEecCCCcEEEEEccCCCcceeeecC--CC---cceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEecc-----
Q psy8758 90 SAAANEDFNLYSYDIRQLNSPLNVHKD--MT---SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK----- 159 (198)
Q Consensus 90 ~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~---~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~----- 159 (198)
+.+..+.- +. ..++.+.|. +|+..+..-.++.|.+.|..+++.+..+...
T Consensus 166 -------------------~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~ 225 (268)
T 3nok_A 166 -------------------ALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRA 225 (268)
T ss_dssp -------------------CEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHH
T ss_pred -------------------eEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCccc
Confidence 33333321 11 234667776 7776666667889999999999988777322
Q ss_pred -------CcccEEEEEEcCCCC-EEEEe
Q psy8758 160 -------RMQHVTHTVWSLDNK-FVISA 179 (198)
Q Consensus 160 -------~~~~v~~~~~s~~~~-~l~~~ 179 (198)
.....+.++|+|+++ +++||
T Consensus 226 ~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 226 VAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp HTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred ccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 123678999999765 55555
No 260
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.53 E-value=1.7e-05 Score=56.15 Aligned_cols=168 Identities=12% Similarity=0.022 Sum_probs=102.2
Q ss_pred CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc-----------
Q psy8758 13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP----------- 81 (198)
Q Consensus 13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~----------- 81 (198)
+..+..++.++.+..+|.. ++....... ....+.++...+++...+ ++.++.+..+|.. ....
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~--~~~~~~~~~~~~~g~l~v--gt~~~~l~~~d~~-g~~~~~~~~~~~~~~ 180 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKT--KKAIYATPIVSEDGTIYV--GSNDNYLYAINPD-GTEKWRFKTNDAITS 180 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEEC--SSCCCSCCEECTTSCEEE--ECTTSEEEEECTT-SCEEEEEECSSCCCS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcC--CCceeeeeEEcCCCEEEE--EcCCCEEEEECCC-CCEeEEEecCCCcee
Confidence 3456667778889999987 554333322 233456667777776544 4567888888876 3211
Q ss_pred -cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccC
Q psy8758 82 -LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKR 160 (198)
Q Consensus 82 -~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~ 160 (198)
.....+..+..++ +.+..+| .+ ++.+.........+.++...++|.. ..++.++.+..+|. +++....+.. .
T Consensus 181 ~~~~d~~g~l~v~t--~~l~~~d-~~-g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t~~~gl~~~~~-~g~~~~~~~~-~ 253 (330)
T 3hxj_A 181 AASIGKDGTIYFGS--DKVYAIN-PD-GTEKWNFYAGYWTVTRPAISEDGTI-YVTSLDGHLYAINP-DGTEKWRFKT-G 253 (330)
T ss_dssp CCEECTTCCEEEES--SSEEEEC-TT-SCEEEEECCSSCCCSCCEECTTSCE-EEEETTTEEEEECT-TSCEEEEEEC-S
T ss_pred eeEEcCCCEEEEEe--CEEEEEC-CC-CcEEEEEccCCcceeceEECCCCeE-EEEcCCCeEEEECC-CCCEeEEeeC-C
Confidence 1111223344555 8899999 44 5555555555566888888888764 44556778888874 4555444422 2
Q ss_pred cccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 161 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 161 ~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
...+..+...+++. |..++.+|.+..+|. +++.
T Consensus 254 ~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~ 286 (330)
T 3hxj_A 254 KRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTE 286 (330)
T ss_dssp SCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCE
T ss_pred CCccccceEcCCCe-EEEecCCCCEEEECC-CCcE
Confidence 23334455666665 445667888999986 5554
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.52 E-value=5.2e-05 Score=58.47 Aligned_cols=180 Identities=10% Similarity=0.003 Sum_probs=110.8
Q ss_pred ceEEEeeC-CCeEEEEEc-cCCceeeeeeeeeec---------CceeeEEeCCCCCe----EEEEecCCccEEEEeccCC
Q psy8758 14 KFVISASD-EMNLRVWKA-HASEKLGPIRKVVMS---------LRSNMVSWNPMEAF----VFTAANEDFNLYSYDIRQL 78 (198)
Q Consensus 14 ~~l~~~~~-d~~i~i~~~-~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~----~~~~~~~d~~i~~~d~~~~ 78 (198)
..+++++. ++.|.-+|. .+++.+-........ .....+++.|.+.. +++ ++.|+.+..+|.++.
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v-~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILK-TQLDGNVAALNAETG 141 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEE-ECTTSEEEEEETTTC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEE-EcCCCEEEEEECCCC
Confidence 45666666 788999999 888866554332110 00123455333333 554 467888988888765
Q ss_pred CCccccc----------------cCceEEEec------CCCcEEEEEccCCCcceeeecCCCcc----------------
Q psy8758 79 NSPLNVH----------------KDMTSAAAN------EDFNLYSYDIRQLNSPLNVHKDMTSA---------------- 120 (198)
Q Consensus 79 ~~~~~~~----------------~~~~~~~~~------~~~~i~~~d~~~~~~~~~~~~~~~~~---------------- 120 (198)
+...... .+..++.+. .++.|+.+|.++ ++.+..+......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~T-G~~~W~~~~~~~~~~~~~~p~~~~~~~~~ 220 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKT-GEQVWRAYATGPDKDLLLASDFNIKNPHY 220 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTT-CCEEEEEESSSCHHHHTBCTTTTTTCGGG
T ss_pred CEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCC-CcEEEEEcCCCCccccccccccccccccc
Confidence 5332210 012344443 379999999998 6666554322110
Q ss_pred ----------------------eEEEEEccCCCEEEEeecC----------------CcEEEEEcCCCceeeEEeccCc-
Q psy8758 121 ----------------------VTSVDYSPTGREFVAGGYD----------------KSLRLYLAHQGHSRDIYHTKRM- 161 (198)
Q Consensus 121 ----------------------i~~~~~sp~~~~l~~~~~d----------------~~v~v~d~~~~~~~~~~~~~~~- 161 (198)
-..+++.++...++.+..+ +.|.-+|.++++.+..+...+.
T Consensus 221 g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d 300 (599)
T 1w6s_A 221 GQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD 300 (599)
T ss_dssp CCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC
T ss_pred cccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc
Confidence 0135667777777766554 3799999999999877744332
Q ss_pred --------ccEEEEEEc-CCC---CEEEEecCCCeEEEEecCCCccc
Q psy8758 162 --------QHVTHTVWS-LDN---KFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 162 --------~~v~~~~~s-~~~---~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
.++. +... .+| ..++.++.+|.++++|.++|+.+
T Consensus 301 ~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 301 EWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp SSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred cccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence 1222 2222 567 46777889999999999999875
No 262
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.51 E-value=5.1e-05 Score=51.44 Aligned_cols=132 Identities=6% Similarity=0.005 Sum_probs=85.0
Q ss_pred CCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceE
Q psy8758 12 DNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTS 90 (198)
Q Consensus 12 ~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 90 (198)
.++.|+.. -.++.+.+||..+.+....+... ..-..+ .+++..++.+ ..++.|.++|..+.
T Consensus 73 ~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~---~~Gwgl--t~dg~~L~vS-dgs~~l~~iDp~t~------------ 134 (243)
T 3mbr_X 73 WRDRLIQLTWRNHEGFVYDLATLTPRARFRYP---GEGWAL--TSDDSHLYMS-DGTAVIRKLDPDTL------------ 134 (243)
T ss_dssp ETTEEEEEESSSSEEEEEETTTTEEEEEEECS---SCCCEE--EECSSCEEEE-CSSSEEEEECTTTC------------
T ss_pred eCCEEEEEEeeCCEEEEEECCcCcEEEEEeCC---CCceEE--eeCCCEEEEE-CCCCeEEEEeCCCC------------
Confidence 34444444 46789999999888876666542 222344 4567777765 45777888887763
Q ss_pred EEecCCCcEEEEEccCCCcceeeecC--CC---cceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEecc------
Q psy8758 91 AAANEDFNLYSYDIRQLNSPLNVHKD--MT---SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK------ 159 (198)
Q Consensus 91 ~~~~~~~~i~~~d~~~~~~~~~~~~~--~~---~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~------ 159 (198)
+.+..+.- +. ..++.+.|. +|+.++..-.+..|.+.|..+++.+..+...
T Consensus 135 ------------------~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~ 195 (243)
T 3mbr_X 135 ------------------QQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDA 195 (243)
T ss_dssp ------------------CEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTT
T ss_pred ------------------eEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCcccc
Confidence 33333321 11 234566665 6776666667889999999999998877322
Q ss_pred ------CcccEEEEEEcCCCCEEEEec
Q psy8758 160 ------RMQHVTHTVWSLDNKFVISAS 180 (198)
Q Consensus 160 ------~~~~v~~~~~s~~~~~l~~~~ 180 (198)
.....+.++++|+++.|...+
T Consensus 196 ~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 196 DALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred ccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 123679999999876554433
No 263
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.51 E-value=5.5e-05 Score=56.05 Aligned_cols=155 Identities=7% Similarity=-0.000 Sum_probs=91.2
Q ss_pred ceeEEEECCC--CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC---c-cEEEEecc
Q psy8758 3 HVTHTVWSLD--NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED---F-NLYSYDIR 76 (198)
Q Consensus 3 ~v~~~~~s~~--~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d---~-~i~~~d~~ 76 (198)
....++|+|+ +..|+.+...+.|+.++..++....... .......++|++++. ++++.... . .+...+..
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~---~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT---NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC---CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec---CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence 3468999985 3445444443789999987765433222 234468999999999 55543211 1 11112111
Q ss_pred CCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-CCCEEEEeecCCcEEEEEcCCCce-ee
Q psy8758 77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYDKSLRLYLAHQGHS-RD 154 (198)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~d~~v~v~d~~~~~~-~~ 154 (198)
.. ......+. .......++++| +|.++++-..++.|+.+|..++.. ..
T Consensus 216 ~~-----------------------------~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~ 265 (433)
T 4hw6_A 216 SG-----------------------------FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEE 265 (433)
T ss_dssp GT-----------------------------TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEE
T ss_pred CC-----------------------------eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEE
Confidence 00 00001111 123346789999 676666666778999999987766 22
Q ss_pred EEeccCcccEEEEEEcCCCCEE-EEecCCCeEEEEecC
Q psy8758 155 IYHTKRMQHVTHTVWSLDNKFV-ISASDEMNLRVWKAH 191 (198)
Q Consensus 155 ~~~~~~~~~v~~~~~s~~~~~l-~~~~~dg~v~~w~~~ 191 (198)
....+....-..++|+|++++| ++-...+.|+.++++
T Consensus 266 ~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 266 EVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 2222222334579999999854 444567889998765
No 264
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.45 E-value=0.00017 Score=52.67 Aligned_cols=166 Identities=7% Similarity=-0.036 Sum_probs=101.9
Q ss_pred CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc-c-------------ccccC
Q psy8758 22 EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP-L-------------NVHKD 87 (198)
Q Consensus 22 d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~-~-------------~~~~~ 87 (198)
...|+..++........+. ....+..++|++.+..|+.+-...+.|..++....... + ....+
T Consensus 95 ~~~I~~i~~~~~~~~~~~~---~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g 171 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLN---NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD 171 (386)
T ss_dssp BSCEEEECTTSCCCEEEEC---SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTT
T ss_pred CccceeeccCCCcEEEEec---CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCC
Confidence 3568888876554322222 23456889999988888877666788988887644211 1 01122
Q ss_pred ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee-cC-CcEEEEEcCCCceeeEEeccCcccEE
Q psy8758 88 MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YD-KSLRLYLAHQGHSRDIYHTKRMQHVT 165 (198)
Q Consensus 88 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~d-~~v~v~d~~~~~~~~~~~~~~~~~v~ 165 (198)
.++++-...+.|.+.++.. ......+.........++++|.+..|..+. .. +.|..+++......... ........
T Consensus 172 ~lY~~d~~~~~I~~~~~dg-~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-~~~~~~Pn 249 (386)
T 3v65_B 172 KLYWTDSGTSRIEVANLDG-AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA-DTHLFWPN 249 (386)
T ss_dssp EEEEEETTTTEEEECBTTS-CSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSSCSCEE
T ss_pred eEEEEcCCCCeEEEEeCCC-CceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE-ECCCCCee
Confidence 3444445556666666654 222222333335678999999777665554 34 67888888754443333 23335678
Q ss_pred EEEEcCCCCEEEEe-cCCCeEEEEecCC
Q psy8758 166 HTVWSLDNKFVISA-SDEMNLRVWKAHA 192 (198)
Q Consensus 166 ~~~~s~~~~~l~~~-~~dg~v~~w~~~~ 192 (198)
.++|+|++..|+.+ +..+.|..++++.
T Consensus 250 Glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 250 GLTIDYAGRRMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEEEGGGTEEEEEETTTTEEEEECTTS
T ss_pred eEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 99999876655544 5667899998864
No 265
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.43 E-value=6e-05 Score=55.84 Aligned_cols=174 Identities=9% Similarity=0.069 Sum_probs=100.6
Q ss_pred eeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758 4 VTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL 82 (198)
Q Consensus 4 v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 82 (198)
...++++| +|.+.++-..++.|+.++..++.....+...........++|+|+++.|+++-...+.|+.++.......+
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~ 309 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKL 309 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCB
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCccc
Confidence 35688898 66665555567789999987665423332221122234699999999787776667888888765321111
Q ss_pred ccccCceEEEec--CCCcEEEEEccCCCcceeeecCCCcceEEEEE---------ccCCCEEEEeecCCcEEEEEcCCCc
Q psy8758 83 NVHKDMTSAAAN--EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDY---------SPTGREFVAGGYDKSLRLYLAHQGH 151 (198)
Q Consensus 83 ~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~---------sp~~~~l~~~~~d~~v~v~d~~~~~ 151 (198)
. ....+.+. ..+.. | +.. ....-.....+++ .++|.++++-...+.|+.++. ++.
T Consensus 310 ~---~~~~~ag~~g~~g~~---d----g~~---~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~ 375 (433)
T 4hw6_A 310 A---VPYIVCGQHSSPGWV---D----GMG---TGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR 375 (433)
T ss_dssp C---CCEEEEECTTCCCCB---C----EEG---GGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE
T ss_pred C---cEEEEEecCCCCccC---C----Ccc---cceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC
Confidence 0 01111221 11100 0 000 0011223567888 677777777777788999985 454
Q ss_pred eeeEEecc----------------CcccEEEEEEc-CCCCEEEEecCCCeEEEEecC
Q psy8758 152 SRDIYHTK----------------RMQHVTHTVWS-LDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 152 ~~~~~~~~----------------~~~~v~~~~~s-~~~~~l~~~~~dg~v~~w~~~ 191 (198)
.....-.+ .-.....++++ ++|.++++=..++.|+..+++
T Consensus 376 v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 376 VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 43332111 01247889999 677776666677888888764
No 266
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.43 E-value=0.00017 Score=51.84 Aligned_cols=181 Identities=7% Similarity=-0.033 Sum_probs=107.5
Q ss_pred eEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc--
Q psy8758 5 THTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL-- 82 (198)
Q Consensus 5 ~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~-- 82 (198)
+|.+..+++ +|+.+ ....|+..++........+. ....+..++|++.+..|+.+-...+.|..++........
T Consensus 37 ~C~~~~~~~-~ll~~-~~~~I~~i~~~g~~~~~~~~---~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 111 (349)
T 3v64_C 37 SCKALGPEP-VLLFA-NRIDIRQVLPHRSEYTLLLN---NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 111 (349)
T ss_dssp CEEESSSCC-EEEEE-CBSCEEEECTTSCCEEEEEC---SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred cccccccCc-eeEee-cccceEEEeCCCCeeEEeec---CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE
Confidence 344444533 33333 33457777776544322222 233468899999888888876667889888876543211
Q ss_pred c------------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee-cC-CcEEEEEcC
Q psy8758 83 N------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG-YD-KSLRLYLAH 148 (198)
Q Consensus 83 ~------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~-~d-~~v~v~d~~ 148 (198)
. ...+.++++-...+.|.+.++.. ......+...-.....++++|.+..|.... .. +.|..+++.
T Consensus 112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG-~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG-AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCC-CceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 0 01223445555566777777764 222222333335578999999766555443 44 788888887
Q ss_pred CCceeeEEeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCC
Q psy8758 149 QGHSRDIYHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHA 192 (198)
Q Consensus 149 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~ 192 (198)
........ .........++++|++..|+.+ ...+.|..++++.
T Consensus 191 G~~~~~~~-~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 191 GSGRRIIA-DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp SCSCEESC-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCcEEEE-ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 54333222 2223567899999876655544 5567899998864
No 267
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.42 E-value=0.00015 Score=50.97 Aligned_cols=174 Identities=10% Similarity=0.081 Sum_probs=99.2
Q ss_pred ceeEEEECCCCceEEEeeC-C-CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-
Q psy8758 3 HVTHTVWSLDNKFVISASD-E-MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN- 79 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~-d-~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~- 79 (198)
....+++.++|+++++... + ..|..++..+++.. .+...........++..+++ .++++...++.|+.+|.....
T Consensus 73 ~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~-~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~ 150 (306)
T 2p4o_A 73 KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVE-TLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSG 150 (306)
T ss_dssp EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEE-EEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEE
T ss_pred CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEE-EEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcE
Confidence 4678999999996555433 2 24666676666532 22221111222344444444 444444457888888875321
Q ss_pred ------------C---c------cccccCceEEEecCCCcEEEEEccCCCcc--eeeecCCCcceEEEEEccCCCEEEEe
Q psy8758 80 ------------S---P------LNVHKDMTSAAANEDFNLYSYDIRQLNSP--LNVHKDMTSAVTSVDYSPTGREFVAG 136 (198)
Q Consensus 80 ------------~---~------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~--~~~~~~~~~~i~~~~~sp~~~~l~~~ 136 (198)
. . +......++++-...+.|..+++...+.. ...+.. ......++++++|+++++.
T Consensus 151 ~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~ 229 (306)
T 2p4o_A 151 SIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGAT 229 (306)
T ss_dssp EEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEEC
T ss_pred eEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEe
Confidence 0 0 00011235566667788889988641111 112211 1235678999999987777
Q ss_pred ecCCcEEEEEcCCCceeeEEe-ccCcccEEEEEEc---CCCCEEEEec
Q psy8758 137 GYDKSLRLYLAHQGHSRDIYH-TKRMQHVTHTVWS---LDNKFVISAS 180 (198)
Q Consensus 137 ~~d~~v~v~d~~~~~~~~~~~-~~~~~~v~~~~~s---~~~~~l~~~~ 180 (198)
...+.|.++|.. ++...... ........+++|. |+++.|+..+
T Consensus 230 ~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 230 HIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp BTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred CCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEEC
Confidence 778899999975 55433211 1222568999998 8877665443
No 268
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.41 E-value=5.1e-05 Score=56.89 Aligned_cols=161 Identities=6% Similarity=0.039 Sum_probs=91.6
Q ss_pred eeEEEECCC-CceEEEe-eCCCeEEEEEccCCceeeeeeeee-ecCceeeEEe-------CCCCCeEEEEecCCcc----
Q psy8758 4 VTHTVWSLD-NKFVISA-SDEMNLRVWKAHASEKLGPIRKVV-MSLRSNMVSW-------NPMEAFVFTAANEDFN---- 69 (198)
Q Consensus 4 v~~~~~s~~-~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~-~~~~v~~~~~-------~~~~~~~~~~~~~d~~---- 69 (198)
...|+|+|. ...|+.+ ...+.|++.|+.++.....+.... .......++| ++++..++++...++.
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 467899983 4444444 344678888887665332222110 1224688999 9999977776433322
Q ss_pred --EEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCc-c-eeeecCCCcceEEEEEccCC-CEEEEeecCCcEEE
Q psy8758 70 --LYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNS-P-LNVHKDMTSAVTSVDYSPTG-REFVAGGYDKSLRL 144 (198)
Q Consensus 70 --i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~-~~~~~~~~~~i~~~~~sp~~-~~l~~~~~d~~v~v 144 (198)
+.+++... ++.+ .. . ...+... .....++++|++ .++++-..++.|..
T Consensus 221 ~~V~~i~r~~------------------~G~~--------~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r 273 (496)
T 3kya_A 221 PSVYIIKRNA------------------DGTF--------DDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFR 273 (496)
T ss_dssp EEEEEEECCT------------------TSCC--------STTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred ceEEEEecCC------------------CCce--------eecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEE
Confidence 44444221 0000 00 0 0111111 234578899954 45556667788999
Q ss_pred EEcC-------CCce-----------e-eEEeccCcccEEEEEEcCCCCEEE-EecCCCeEEEEecC
Q psy8758 145 YLAH-------QGHS-----------R-DIYHTKRMQHVTHTVWSLDNKFVI-SASDEMNLRVWKAH 191 (198)
Q Consensus 145 ~d~~-------~~~~-----------~-~~~~~~~~~~v~~~~~s~~~~~l~-~~~~dg~v~~w~~~ 191 (198)
+|+. ++.. . ..+..+.......++|+|+|++|+ +-+....|+.++..
T Consensus 274 ~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 274 LDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp ECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 9997 5543 1 122223334568999999999544 44567788886653
No 269
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.40 E-value=0.00019 Score=50.88 Aligned_cols=171 Identities=7% Similarity=-0.043 Sum_probs=103.2
Q ss_pred EEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC----CC-Cc-ccc-----
Q psy8758 16 VISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ----LN-SP-LNV----- 84 (198)
Q Consensus 16 l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~----~~-~~-~~~----- 84 (198)
|+.+. ...|+..|+...+....+.. ...+..++|++.+..++.+-...+.|..+++.. .. .. +..
T Consensus 4 ll~~~-~~~I~~i~~~~~~~~~~~~~---~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 4 LFFTN-RHEVRKMTLDRSEYTSLIPN---LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp EEEEC-BSSEEEEETTSCCCEEEECS---CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEEC-CCeEEEEECCCcceEehhcC---CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 34333 34688899987654333322 345678999998888888766678899998764 11 11 110
Q ss_pred -------ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec-C-CcEEEEEcCCCceeeE
Q psy8758 85 -------HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-D-KSLRLYLAHQGHSRDI 155 (198)
Q Consensus 85 -------~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d-~~v~v~d~~~~~~~~~ 155 (198)
..+.++++-...+.|.+.++.. ......+.........++++|.+..|..+.. . +.|..+++........
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g-~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~ 158 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKG-VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 158 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTS-SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCC-CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEE
Confidence 1122344445566677777664 2222222323356789999997776655543 2 6888888864433222
Q ss_pred EeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCC
Q psy8758 156 YHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHA 192 (198)
Q Consensus 156 ~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~ 192 (198)
. ...-.....++++|++..|+.+ +..+.|..+|++.
T Consensus 159 ~-~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 159 V-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp E-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred E-ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 2 2233568899999987666544 5567899999864
No 270
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.39 E-value=0.0002 Score=51.12 Aligned_cols=178 Identities=11% Similarity=0.164 Sum_probs=108.1
Q ss_pred CceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCC----CC---eEEEEecC--CccEEEEecc--CCC--
Q psy8758 13 NKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPM----EA---FVFTAANE--DFNLYSYDIR--QLN-- 79 (198)
Q Consensus 13 ~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~~~~~~~~--d~~i~~~d~~--~~~-- 79 (198)
..+++.....+.+.+||+ +++.+..+. .+.++.+..-|. ++ .++++... ++++.+|++. +..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~----~g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYN----TGKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEEC----CSCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEcc----CCCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 345666667889999999 677655543 244556655552 22 23444333 5789999663 110
Q ss_pred ---C---ccc--------------cccC-ceEEEecCCCcEEEEEccCC------CcceeeecCCCcceEEEEEccCCCE
Q psy8758 80 ---S---PLN--------------VHKD-MTSAAANEDFNLYSYDIRQL------NSPLNVHKDMTSAVTSVDYSPTGRE 132 (198)
Q Consensus 80 ---~---~~~--------------~~~~-~~~~~~~~~~~i~~~d~~~~------~~~~~~~~~~~~~i~~~~~sp~~~~ 132 (198)
. ++. ...+ .++++...++.+..|++... .+.++.+.- ...+..+...+....
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~ 193 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGR 193 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCe
Confidence 0 100 0011 24666677788888888431 234455543 456888999998889
Q ss_pred EEEeecCCcEEEEEcC-----CCceeeEEeccC-cccEEEEEE--cCCCC-EEEEec-CCCeEEEEecC-CCccc
Q psy8758 133 FVAGGYDKSLRLYLAH-----QGHSRDIYHTKR-MQHVTHTVW--SLDNK-FVISAS-DEMNLRVWKAH-ASEKL 196 (198)
Q Consensus 133 l~~~~~d~~v~v~d~~-----~~~~~~~~~~~~-~~~v~~~~~--s~~~~-~l~~~~-~dg~v~~w~~~-~~~~~ 196 (198)
|..+-++.-|..|+.+ +++.+..+..++ ...+..|++ .++++ +|++++ .++.+.+||.+ +.+.+
T Consensus 194 Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~v 268 (355)
T 3amr_A 194 LYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYV 268 (355)
T ss_dssp EEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEE
T ss_pred EEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEE
Confidence 9999988777777755 233443321222 246888888 45555 555554 67899999996 44443
No 271
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.39 E-value=0.00019 Score=50.81 Aligned_cols=189 Identities=5% Similarity=-0.054 Sum_probs=109.9
Q ss_pred ceeEEEECCCCceEEEe-eCCCeEEEEEccCC---ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758 3 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHAS---EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL 78 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~ 78 (198)
...+++|++.+..|+.. ...+.|..+++... .....+.. ..-.....+++.+.+..++.+-...+.|.+.+....
T Consensus 31 ~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~-~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 31 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred ceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe-CCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 45688999876555544 45688999988651 21122211 111345788998877777776566788998887643
Q ss_pred CCc--cc----------c--ccCceEEEecCC-CcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEee-cCCc
Q psy8758 79 NSP--LN----------V--HKDMTSAAANED-FNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGG-YDKS 141 (198)
Q Consensus 79 ~~~--~~----------~--~~~~~~~~~~~~-~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~-~d~~ 141 (198)
... .. . ..+.++++.... +.|...++.. .....+ ...-...+.++++|++..|..+. ..+.
T Consensus 110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG--~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC--CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCe
Confidence 211 11 0 112233333222 5666666653 333333 22334578999999877665554 5678
Q ss_pred EEEEEcCCCceeeEEec-cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 142 LRLYLAHQGHSRDIYHT-KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 142 v~v~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
|..+|+........... ........+++. .+.++.+-...+.|..++..+|+.
T Consensus 188 I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~ 241 (316)
T 1ijq_A 188 ISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSD 241 (316)
T ss_dssp EEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCC
T ss_pred EEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcc
Confidence 99999975433332221 122346677875 355555666778899998877664
No 272
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.37 E-value=8.3e-05 Score=58.96 Aligned_cols=156 Identities=10% Similarity=0.017 Sum_probs=80.9
Q ss_pred eEEEECCCCceEEEeeCC-----CeEEEEEccCCceee-eeeeeeecCceeeEEeCCCCCeEEEEecC--CccEEEEecc
Q psy8758 5 THTVWSLDNKFVISASDE-----MNLRVWKAHASEKLG-PIRKVVMSLRSNMVSWNPMEAFVFTAANE--DFNLYSYDIR 76 (198)
Q Consensus 5 ~~~~~s~~~~~l~~~~~d-----~~i~i~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--d~~i~~~d~~ 76 (198)
..++|+|||+.|+....+ ..|.++++.++.... .+...........+.|+||+++|+.+... ...|+++|+.
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 468899999877776654 257778887654221 12111122345678899999998876532 2234444443
Q ss_pred CCCCccccccCceEEEecCCCcEEEEEccCCCcce--eee-cCCCcceEEEEEccCCCEEEEeecC----CcEEEEEcCC
Q psy8758 77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPL--NVH-KDMTSAVTSVDYSPTGREFVAGGYD----KSLRLYLAHQ 149 (198)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~--~~~-~~~~~~i~~~~~sp~~~~l~~~~~d----~~v~v~d~~~ 149 (198)
+..... ..+ ........++.|+..+.+++....+ ..|..+++.+
T Consensus 304 -----------------------------~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 304 -----------------------------KGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp -----------------------------SCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred -----------------------------CCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 311112 222 2233444555554444444444443 3566777765
Q ss_pred C-ceee-EEeccCcccEEEEEEcCCCCEEEEecCCCe--EEEEec
Q psy8758 150 G-HSRD-IYHTKRMQHVTHTVWSLDNKFVISASDEMN--LRVWKA 190 (198)
Q Consensus 150 ~-~~~~-~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~--v~~w~~ 190 (198)
+ .... .+.......+..+.+. .+.++++...++. ++++++
T Consensus 355 ~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 355 PSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp TTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred cccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 2 3233 3312212245555554 2334555666775 455554
No 273
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.33 E-value=0.00028 Score=49.98 Aligned_cols=168 Identities=8% Similarity=0.100 Sum_probs=97.5
Q ss_pred eEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeeee-------cCceeeEEe---CCCCCeEEEEecCCccEEEE
Q psy8758 5 THTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVM-------SLRSNMVSW---NPMEAFVFTAANEDFNLYSY 73 (198)
Q Consensus 5 ~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~-------~~~v~~~~~---~~~~~~~~~~~~~d~~i~~~ 73 (198)
.+++|.+....++.++ ..+.|..|+...+..... .... ...+..+.| .|+++.++++ .... -|
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~--~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~-~~~~---af 89 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV--VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVM-KNAK---SF 89 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE--CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEE-EETT---TT
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE--ecCCccccCCCcceeeEEEEeccCCCCcEEEEE-cccc---cc
Confidence 4678987555565555 789999999875543222 1111 113478889 6875555432 2100 00
Q ss_pred eccCCCCccccccCceEEEecCCCcEEEEEcc---CCCcceeeec--C-----------CCcceEEEEEccCCCEEEEee
Q psy8758 74 DIRQLNSPLNVHKDMTSAAANEDFNLYSYDIR---QLNSPLNVHK--D-----------MTSAVTSVDYSPTGREFVAGG 137 (198)
Q Consensus 74 d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~---~~~~~~~~~~--~-----------~~~~i~~~~~sp~~~~l~~~~ 137 (198)
+.... . -+.+..+..+|+. + ++.+.... . .......|+..++|+..++++
T Consensus 90 ~~~g~---------~----~~g~~~v~~~Dl~~~~t-g~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s 155 (334)
T 2p9w_A 90 NFADQ---------S----SHGASSFHSFNLPLSEN-SKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFA 155 (334)
T ss_dssp CTTSC---------C----SSSCCEEEEEESSCCTT-CCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEE
T ss_pred ccccc---------c----cCCCCEEEEEcCCcCCC-CCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCC
Confidence 00000 0 0123344455554 3 23332221 1 123488999999999999888
Q ss_pred cC-CcEEEEEcCCCceeeEEecc----CcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758 138 YD-KSLRLYLAHQGHSRDIYHTK----RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 192 (198)
Q Consensus 138 ~d-~~v~v~d~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~ 192 (198)
.- +.|...+............. .....+.++++|+|+.|++....|.+..+|+.+
T Consensus 156 ~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 156 LGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp ESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 87 88877777654332222111 112367899999999888776699999999874
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.29 E-value=0.00044 Score=50.72 Aligned_cols=191 Identities=5% Similarity=-0.063 Sum_probs=110.5
Q ss_pred cceeEEEECCCCceEEEee-CCCeEEEEEccCCc---eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758 2 QHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASE---KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~ 77 (198)
+.+.+++|++.+..|+... ..+.|+.+++.... ....+.. ........+++.+.+..|+.+-...+.|.+.++..
T Consensus 112 ~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~-~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 112 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC-SSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred CcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe-CCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 4567899998666555543 56788888876421 1111211 11234578889887777777766678888888764
Q ss_pred CCCccc--------------cccCceEEEec-CCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEee-cCC
Q psy8758 78 LNSPLN--------------VHKDMTSAAAN-EDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGG-YDK 140 (198)
Q Consensus 78 ~~~~~~--------------~~~~~~~~~~~-~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~-~d~ 140 (198)
...... ...+.++.+-. ..+.|...++.. .....+ ...-...+.|+++|++..|..+. ..+
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG--~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~ 268 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 268 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC--CccEEEEECCCCceEEEEEEeCCCEEEEEECCCC
Confidence 332111 11122333322 235666666653 222222 33335678999999877666654 467
Q ss_pred cEEEEEcCCCceeeEEec-cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 141 SLRLYLAHQGHSRDIYHT-KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 141 ~v~v~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
.|..+|+........... .......++++. .+.++.+-...+.|..+|..+|+.+
T Consensus 269 ~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 269 SISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDV 324 (400)
T ss_dssp EEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCC
T ss_pred EEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCce
Confidence 899999876544333321 122345677773 3445555566788998887777543
No 275
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.28 E-value=0.00067 Score=52.26 Aligned_cols=177 Identities=11% Similarity=0.029 Sum_probs=104.0
Q ss_pred eEEEeeCCCeEEEEEccCCceeeeeeeeeecCc-------eeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcccc---
Q psy8758 15 FVISASDEMNLRVWKAHASEKLGPIRKVVMSLR-------SNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNV--- 84 (198)
Q Consensus 15 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~--- 84 (198)
.+++++.++.|.-+|..+++.+-.+........ ...+.. .+..+++ ++.++.+..+|.++.+.....
T Consensus 70 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~-~t~dg~l~AlD~~TG~~~W~~~~~ 146 (582)
T 1flg_A 70 VIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFF-GTLDASVVALNKNTGKVVWKKKFA 146 (582)
T ss_dssp EEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEE-EETTTEEEEEESSSCCEEEEEECS
T ss_pred EEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEE-EeCCCEEEEEECCCCCEEeeecCC
Confidence 455555544588899999987655543211100 011222 2445554 457888888887665432110
Q ss_pred --------------ccC-----ceEEEec------CCCcEEEEEccCCCcceeeecCCCc--------------------
Q psy8758 85 --------------HKD-----MTSAAAN------EDFNLYSYDIRQLNSPLNVHKDMTS-------------------- 119 (198)
Q Consensus 85 --------------~~~-----~~~~~~~------~~~~i~~~d~~~~~~~~~~~~~~~~-------------------- 119 (198)
..+ ..++.+. .++.|..+|.++ ++.+........
T Consensus 147 ~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~t-G~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 147 DHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDT-GEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp CGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTT-CCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCC-CCEEeecCCCccccccccCccccccccccccc
Confidence 011 0344443 378899999887 555544322100
Q ss_pred ---------------------ceEEEEEccCCCEEEEeec--------------------C----CcEEEEEcCCCceee
Q psy8758 120 ---------------------AVTSVDYSPTGREFVAGGY--------------------D----KSLRLYLAHQGHSRD 154 (198)
Q Consensus 120 ---------------------~i~~~~~sp~~~~l~~~~~--------------------d----~~v~v~d~~~~~~~~ 154 (198)
.-..++++|+...++.+.. | +.|.-+|..+++.+.
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W 305 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence 0123567777666665542 2 579999999999988
Q ss_pred EEecc-Cc--------ccEEEEEEc-CCCC---EEEEecCCCeEEEEecCCCccc
Q psy8758 155 IYHTK-RM--------QHVTHTVWS-LDNK---FVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 155 ~~~~~-~~--------~~v~~~~~s-~~~~---~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
.+... |. .++. +... .+|+ .++.++.+|.++++|.++|+.+
T Consensus 306 ~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 359 (582)
T 1flg_A 306 FYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQ 359 (582)
T ss_dssp EEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred EEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEe
Confidence 77433 21 1221 1222 4674 6788899999999999999876
No 276
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.27 E-value=6.2e-05 Score=58.76 Aligned_cols=185 Identities=10% Similarity=0.020 Sum_probs=100.3
Q ss_pred EEEECC-CCceEEEeeCCC-----------eEEEEEccCCceeeeeeeee--ecCceeeEEeCCCCCeEEEEecCCccEE
Q psy8758 6 HTVWSL-DNKFVISASDEM-----------NLRVWKAHASEKLGPIRKVV--MSLRSNMVSWNPMEAFVFTAANEDFNLY 71 (198)
Q Consensus 6 ~~~~s~-~~~~l~~~~~d~-----------~i~i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~d~~i~ 71 (198)
.+++.+ +++.++.|+.+. .+.+||..+++... +.... ......++++.++++.+++.|..+..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~-~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSD-RTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCC-CEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEe-CcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 556677 888888886542 57889988765322 22111 1222234677888887777554567899
Q ss_pred EEeccCCCC-------------ccccc-cCceEEEec-CC-----CcEEEEEccCCCcceeeecC-----CCcceEEEEE
Q psy8758 72 SYDIRQLNS-------------PLNVH-KDMTSAAAN-ED-----FNLYSYDIRQLNSPLNVHKD-----MTSAVTSVDY 126 (198)
Q Consensus 72 ~~d~~~~~~-------------~~~~~-~~~~~~~~~-~~-----~~i~~~d~~~~~~~~~~~~~-----~~~~i~~~~~ 126 (198)
+||..+..- ..... .+.+++.|+ .+ ..+.+||..+ ..-. .+.. ....-....+
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t-~~W~-~~~~~~~~p~~~~~~~~~~ 346 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS-KTWT-SLPNAKVNPMLTADKQGLY 346 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT-TEEE-EETTSCSGGGCCCCTTGGG
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCC-Ccce-eCCCcccccccccccccee
Confidence 999864320 01112 445667776 34 5688999876 2221 1110 0000001123
Q ss_pred ccCCCEEEEeecC---------CcEEEEEcCCCceeeEEeccC--------cccEEEEEEcC-CCCEEEEecCCC-----
Q psy8758 127 SPTGREFVAGGYD---------KSLRLYLAHQGHSRDIYHTKR--------MQHVTHTVWSL-DNKFVISASDEM----- 183 (198)
Q Consensus 127 sp~~~~l~~~~~d---------~~v~v~d~~~~~~~~~~~~~~--------~~~v~~~~~s~-~~~~l~~~~~dg----- 183 (198)
..+++.++.++.+ ..+..||..+........... ...-.++.|.. ++++++.|+.++
T Consensus 347 ~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~ 426 (656)
T 1k3i_A 347 RSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSD 426 (656)
T ss_dssp TTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSB
T ss_pred ecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCC
Confidence 3455555555544 356788888765433221110 01223444543 677777777432
Q ss_pred ------eEEEEecCCC
Q psy8758 184 ------NLRVWKAHAS 193 (198)
Q Consensus 184 ------~v~~w~~~~~ 193 (198)
.+.+||..+.
T Consensus 427 ~~~~~~~v~~yd~~~~ 442 (656)
T 1k3i_A 427 ATTNAHIITLGEPGTS 442 (656)
T ss_dssp CCCCEEEEECCSTTSC
T ss_pred cCCcceEEEcCCCCCC
Confidence 6778887654
No 277
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.27 E-value=0.0004 Score=49.27 Aligned_cols=188 Identities=5% Similarity=-0.048 Sum_probs=111.6
Q ss_pred ceeEEEECCCCceEE-EeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 3 HVTHTVWSLDNKFVI-SASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
...+++|.+.+..|+ +-...+.|+.+++..+.....+... .-.....+++.+.+..++.+-...+.|.++++......
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~-~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS-GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE-CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC-CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 356788888555444 4446678888888655322222211 12345688998877777776666788999987643321
Q ss_pred cc--------------cccCceEEEe-cCCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEe-ecCCcEEE
Q psy8758 82 LN--------------VHKDMTSAAA-NEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAG-GYDKSLRL 144 (198)
Q Consensus 82 ~~--------------~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~-~~d~~v~v 144 (198)
.. ...+.++.+- +..+.|...++.. .....+ ...-...+.++++|++..|..+ +..+.|..
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG--~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~ 192 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG--SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 192 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS--CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC--CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEE
Confidence 11 0112223332 2346677777653 222222 2233456899999977766555 45678999
Q ss_pred EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
+|+......... .+.......+++.. +.++.+-...+.|..++..+|+.
T Consensus 193 ~d~dG~~~~~~~-~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~ 241 (318)
T 3sov_A 193 SNLDGTNRQAVV-KGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEG 241 (318)
T ss_dssp EETTSCSCEEEE-CSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred EcCCCCceEEEe-cCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCc
Confidence 998754433333 33335567777753 34455556678899999877764
No 278
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.26 E-value=3e-05 Score=60.89 Aligned_cols=189 Identities=7% Similarity=-0.052 Sum_probs=102.9
Q ss_pred ceeEEEECCCCceEEEee-CCCeEEEEEccC----CceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC
Q psy8758 3 HVTHTVWSLDNKFVISAS-DEMNLRVWKAHA----SEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ 77 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~ 77 (198)
.+.+++|++.+..|+... ..+.|+.+++.. ......+.. .......+++.+.+..|+.+-...+.|.++++..
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~--~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg 484 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR--DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 484 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS--CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSS
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC--CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCC
Confidence 456788988766665553 557888888864 121111111 1123457888876666766545567888888764
Q ss_pred CCCccc------------c--ccCceEEEecC-CCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEE-EeecCC
Q psy8758 78 LNSPLN------------V--HKDMTSAAANE-DFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFV-AGGYDK 140 (198)
Q Consensus 78 ~~~~~~------------~--~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~-~~~~d~ 140 (198)
...... . ..+.++++-.. .+.|..+++.. .....+ ...-...+.|+|+|++..|+ +-...+
T Consensus 485 ~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG--~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~ 562 (699)
T 1n7d_A 485 VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 562 (699)
T ss_dssp CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS--CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTT
T ss_pred CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC--CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCC
Confidence 321110 0 11122333222 25666666543 222222 22233467899999866554 445567
Q ss_pred cEEEEEcCCCceeeEEec-cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 141 SLRLYLAHQGHSRDIYHT-KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 141 ~v~v~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
.|..+++........+.. ........|++..+ .++++....+.|..++..+|+.+
T Consensus 563 ~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 563 SISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDV 618 (699)
T ss_dssp EEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEE
T ss_pred eEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCce
Confidence 899999875433322211 11123345566544 44445566788999988776643
No 279
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.23 E-value=0.00039 Score=47.62 Aligned_cols=186 Identities=11% Similarity=0.168 Sum_probs=106.7
Q ss_pred cceeEEEECCCCceEE-EeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758 2 QHVTHTVWSLDNKFVI-SASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS 80 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~-~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~ 80 (198)
+.+..++|+|++..|+ +...++.|...|.. ++..+.+.. ......-.+++.+++.++++ ...++.+.++++.....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l-~g~~D~EGIa~~~~g~~~vs-~E~~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL-DFVKDLETIEYIGDNQFVIS-DERDYAIYVISLTPNSE 103 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC-SSCSSEEEEEECSTTEEEEE-ETTTTEEEEEEECTTCC
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec-CCCCChHHeEEeCCCEEEEE-ECCCCcEEEEEcCCCCe
Confidence 4578999999776554 56677888888886 665554432 11235678888888765544 34567788777653321
Q ss_pred ---------cc---cccc----------CceEEEecCCCcEEEEEccC--CCcceeeec-------CCCcceEEEEEccC
Q psy8758 81 ---------PL---NVHK----------DMTSAAANEDFNLYSYDIRQ--LNSPLNVHK-------DMTSAVTSVDYSPT 129 (198)
Q Consensus 81 ---------~~---~~~~----------~~~~~~~~~~~~i~~~d~~~--~~~~~~~~~-------~~~~~i~~~~~sp~ 129 (198)
.+ .... ...+.++.+.....+|.... ....+.... .+...+..++++|.
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~ 183 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ 183 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETT
T ss_pred eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCC
Confidence 01 0000 01233333333333333321 011122211 12335789999996
Q ss_pred -CCEEEEeecCCcEEEEEcCCCceeeEEecc--C------cccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758 130 -GREFVAGGYDKSLRLYLAHQGHSRDIYHTK--R------MQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 192 (198)
Q Consensus 130 -~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~--~------~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~ 192 (198)
+++++.+.....+.++|... +.+..+.-. . -.....++|.++|+++++ ++-+.++.+.-..
T Consensus 184 tg~lliLS~~s~~L~~~d~~g-~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~~~ 253 (255)
T 3qqz_A 184 KNTLLVLSHESRALQEVTLVG-EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTPQS 253 (255)
T ss_dssp TTEEEEEETTTTEEEEECTTC-CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC--
T ss_pred CCeEEEEECCCCeEEEEcCCC-CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEecC
Confidence 45666777788899999764 444444211 1 136789999999985554 6777777776543
No 280
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.19 E-value=0.00095 Score=51.29 Aligned_cols=178 Identities=11% Similarity=0.014 Sum_probs=106.6
Q ss_pred ceEEEeeC-CCeEEEEEc-cCCceeeeeeeeeecCc---------eeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758 14 KFVISASD-EMNLRVWKA-HASEKLGPIRKVVMSLR---------SNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL 82 (198)
Q Consensus 14 ~~l~~~~~-d~~i~i~~~-~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 82 (198)
..++.++. ++.|.-+|. .+++.+-.......... ...+.. .+..+++ ++.|+.+..+|.++.+...
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v-~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 63 DMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVK-KQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEE-ECTTSEEEEEETTTCCEEE
T ss_pred CEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEE-EeCCCEEEEEECCCCCEEE
Confidence 35666666 788999999 88886655432211000 011222 2455555 4578889888887654322
Q ss_pred cc-----------c-----cCceEEEecC------CCcEEEEEccCCCcceeeecCCCcc--------------------
Q psy8758 83 NV-----------H-----KDMTSAAANE------DFNLYSYDIRQLNSPLNVHKDMTSA-------------------- 120 (198)
Q Consensus 83 ~~-----------~-----~~~~~~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~-------------------- 120 (198)
.. . .+..++.+.. ++.|..+|.++ ++.+..+......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~t-G~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~ 218 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKT-GELKWRAFATGSDDSVRLAKDFNSANPHYGQFG 218 (571)
T ss_dssp EEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTT-CCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSS
T ss_pred EecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCC-CcEEEEEccCCCccccccCcccccccccccccc
Confidence 11 0 0123444443 78999999988 6666554322110
Q ss_pred ------------------eEEEEEccCCCEEEEeecC----------------CcEEEEEcCCCceeeEEeccC------
Q psy8758 121 ------------------VTSVDYSPTGREFVAGGYD----------------KSLRLYLAHQGHSRDIYHTKR------ 160 (198)
Q Consensus 121 ------------------i~~~~~sp~~~~l~~~~~d----------------~~v~v~d~~~~~~~~~~~~~~------ 160 (198)
...+++.|+...+..+..+ +.|..+|..+++.+..+...+
T Consensus 219 ~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~ 298 (571)
T 2ad6_A 219 LGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDF 298 (571)
T ss_dssp HHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCC
T ss_pred cccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccccc
Confidence 0235677766666655432 359999999999887764322
Q ss_pred ---cccEEEEEEcCCCC---EEEEecCCCeEEEEecCCCccc
Q psy8758 161 ---MQHVTHTVWSLDNK---FVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 161 ---~~~v~~~~~s~~~~---~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
..++. +...++|+ .++.++.+|.++++|..+|+.+
T Consensus 299 ~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~ 339 (571)
T 2ad6_A 299 AGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLI 339 (571)
T ss_dssp CCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred ccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEE
Confidence 12221 22234774 5677888999999999999875
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.19 E-value=0.00078 Score=49.38 Aligned_cols=173 Identities=7% Similarity=-0.038 Sum_probs=105.2
Q ss_pred eEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-----Ccc-c-----
Q psy8758 15 FVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-----SPL-N----- 83 (198)
Q Consensus 15 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-----~~~-~----- 83 (198)
+|+.+ ....|+..++........+. ....+..++|++.+..|+.+-...+.|+.+++.... ..+ .
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~~~~---~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 160 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTSLIP---NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 160 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEEEEC---SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSC
T ss_pred eeEEe-ccceeEEEccCCcceeEecc---ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCC
Confidence 34433 34678888887654333222 234578999999888888876667888888876411 111 1
Q ss_pred -------cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec--CCcEEEEEcCCCceee
Q psy8758 84 -------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY--DKSLRLYLAHQGHSRD 154 (198)
Q Consensus 84 -------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--d~~v~v~d~~~~~~~~ 154 (198)
...+.++++-...+.|.+.++.. ......+.........++++|.+..|+.... .+.|...++.......
T Consensus 161 p~glavD~~~~~lY~~d~~~~~I~~~~~~g-~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 239 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTDSVLGTVSVADTKG-VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 239 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEECTTT-CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred cccEEEEecCCceEEEECCCCeEEEEeCCC-CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence 01223444445556677777664 2222223333445789999997666665542 4788888887654433
Q ss_pred EEeccCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCCC
Q psy8758 155 IYHTKRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHAS 193 (198)
Q Consensus 155 ~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~~ 193 (198)
.. ...-.....++++|++..|+.+ ...+.|..+|++..
T Consensus 240 ~~-~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 240 LV-TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp EE-CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EE-ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 33 2333578899999887766655 45678999988643
No 282
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=98.17 E-value=0.00077 Score=49.39 Aligned_cols=163 Identities=10% Similarity=0.154 Sum_probs=97.5
Q ss_pred CCCceEEEeeCCCeEEEEEccCCceeeeeeeee--ecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCc
Q psy8758 11 LDNKFVISASDEMNLRVWKAHASEKLGPIRKVV--MSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDM 88 (198)
Q Consensus 11 ~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~ 88 (198)
.+|+.++.+ .++.||.-++......+.+.... .-..+..+..+|+|.+++..| +..|.+..+..........
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g--~~~V~Vv~LP~~~~~~~~~--- 103 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN--DNEIFVMEVPWGYSNVEDV--- 103 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC--SSEEEEEECCTTCSCCCCH---
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec--CCeEEEEEecCccccCccc---
Confidence 344444444 34678877876444333333321 122578899999999998875 5688888877321111000
Q ss_pred eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC---CCEEEEeecCCcEEEEEcCCCceee-EEe-------
Q psy8758 89 TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT---GREFVAGGYDKSLRLYLAHQGHSRD-IYH------- 157 (198)
Q Consensus 89 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~---~~~l~~~~~d~~v~v~d~~~~~~~~-~~~------- 157 (198)
....--+++.|.+... . .....+|..+.|+|- +..|++-..|+.|++||+....... .+.
T Consensus 104 ---~~~~~~q~~ty~l~~~----~--~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg 174 (452)
T 3pbp_A 104 ---SIQDAFQIFHYSIDEE----E--VGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFG 174 (452)
T ss_dssp ---HHHHTTEEEEEEGGGC----C----CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEE
T ss_pred ---ccccccceeEEEcCCc----c--cCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccC
Confidence 0001122445555431 1 113678999999996 4589999999999999998632211 121
Q ss_pred -ccCcccEEEEEEcCCCCEEEE--ecCCCeEEEE
Q psy8758 158 -TKRMQHVTHTVWSLDNKFVIS--ASDEMNLRVW 188 (198)
Q Consensus 158 -~~~~~~v~~~~~s~~~~~l~~--~~~dg~v~~w 188 (198)
......|.+++|.+++-.|.. .+..|.|+-.
T Consensus 175 ~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 175 LDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp SCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 112257889999998876665 4477877644
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.14 E-value=0.0018 Score=51.64 Aligned_cols=189 Identities=5% Similarity=-0.079 Sum_probs=107.1
Q ss_pred ceeEEEECCCCceEE-EeeCCCeEEEEEccCCce---eeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCC
Q psy8758 3 HVTHTVWSLDNKFVI-SASDEMNLRVWKAHASEK---LGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQL 78 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~-~~~~d~~i~i~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~ 78 (198)
.+.+++|.+....|+ +-...+.|+.+++..... ...+.. ........+++.+.+..|+.+-...+.|.+.++...
T Consensus 425 ~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~-~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS-RDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC-SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe-cCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 456788888555444 444567788888764211 111111 012345789999888888887777888999988644
Q ss_pred CCccc--------------cccCceEEEecC-CCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEe-ecCCc
Q psy8758 79 NSPLN--------------VHKDMTSAAANE-DFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAG-GYDKS 141 (198)
Q Consensus 79 ~~~~~--------------~~~~~~~~~~~~-~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~-~~d~~ 141 (198)
..... ...+.++++-.. .+.|...++.. .....+ ...-.....|+++|.+..|+.+ ...+.
T Consensus 504 ~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG--~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~ 581 (791)
T 3m0c_C 504 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 581 (791)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred eEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC--CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCc
Confidence 32111 111223333222 25566666653 333333 3333568899999877766655 44678
Q ss_pred EEEEEcCCCceeeEEec-cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 142 LRLYLAHQGHSRDIYHT-KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 142 v~v~d~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
|..+++........... ..-....+|++.. +.++++-...+.|...+..+|+.
T Consensus 582 I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 582 ISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp EEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCC
T ss_pred EEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcc
Confidence 99999876554444322 1123445666643 34444445667888888766654
No 284
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.11 E-value=0.0014 Score=49.32 Aligned_cols=177 Identities=7% Similarity=0.019 Sum_probs=99.0
Q ss_pred eeEEEECCCCc-eEEEeeCCCeEEEEEcc-------CCce-----------eeeeeeeeecCceeeEEeCCCCCeEEEEe
Q psy8758 4 VTHTVWSLDNK-FVISASDEMNLRVWKAH-------ASEK-----------LGPIRKVVMSLRSNMVSWNPMEAFVFTAA 64 (198)
Q Consensus 4 v~~~~~s~~~~-~l~~~~~d~~i~i~~~~-------~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 64 (198)
...++++|++. ++++-..++.|..+|+. ++.. ...+...........++|+|+++.++++-
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD 328 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGV 328 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEe
Confidence 46788899554 44455577889999987 5543 11222222234457899999999777765
Q ss_pred cCCccEEEEeccCCCCccccccCceEEEec--CCCcEEEEEccCCCc-ceeeecCCCcceE-EEEEc-------cCCCEE
Q psy8758 65 NEDFNLYSYDIRQLNSPLNVHKDMTSAAAN--EDFNLYSYDIRQLNS-PLNVHKDMTSAVT-SVDYS-------PTGREF 133 (198)
Q Consensus 65 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~--~~~~i~~~d~~~~~~-~~~~~~~~~~~i~-~~~~s-------p~~~~l 133 (198)
.....|+.++.......+. ....+++. ..|.. | +. ....+ .... .++.. +++.++
T Consensus 329 ~~~h~I~kid~dg~~~~~~---~~~~~aG~~g~~G~~---D----G~~~~a~f----~~P~~gv~vd~~~~~~~~~g~ly 394 (496)
T 3kya_A 329 INNHYFMRSDYDEIKKEFI---TPYNFVGGYKQSGYR---D----DVGTEARM----NNPCQGVFVKNPDYTGEEEYDFY 394 (496)
T ss_dssp TTTTEEEEEEEETTTTEEC---CCEEEEEBTTBCCCB---C----CBGGGCBC----SSEEEEEEEECTTCCSSCCEEEE
T ss_pred CCCCEEEEEecCCCcceec---ccEEecCCCCCCccc---C----Cccccccc----CCCeEEEEEccccccccCCCeEE
Confidence 6677888876543211110 01122221 11100 1 10 01111 1223 34443 456666
Q ss_pred EEeecCCcEEEEEcCCCceeeEEec------------c----------CcccEEEEEEcCC-CCEEEEecCCCeEEEEec
Q psy8758 134 VAGGYDKSLRLYLAHQGHSRDIYHT------------K----------RMQHVTHTVWSLD-NKFVISASDEMNLRVWKA 190 (198)
Q Consensus 134 ~~~~~d~~v~v~d~~~~~~~~~~~~------------~----------~~~~v~~~~~s~~-~~~l~~~~~dg~v~~w~~ 190 (198)
++-...+.|+.++ .++......-. + .-.....++++++ |.++++=..+..|+.+++
T Consensus 395 VaD~~N~rIr~i~-~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~ 473 (496)
T 3kya_A 395 FVDRLNFCVRKVT-PEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISM 473 (496)
T ss_dssp EEEGGGTEEEEEC-TTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EEECCCCEEEEEe-CCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEEC
Confidence 6666778888888 45543332211 1 0124778999997 776666677889999998
Q ss_pred CCCcc
Q psy8758 191 HASEK 195 (198)
Q Consensus 191 ~~~~~ 195 (198)
+....
T Consensus 474 ~~~~~ 478 (496)
T 3kya_A 474 EQEEN 478 (496)
T ss_dssp CCCC-
T ss_pred CCCcc
Confidence 76443
No 285
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.09 E-value=0.0014 Score=48.59 Aligned_cols=173 Identities=10% Similarity=0.093 Sum_probs=96.2
Q ss_pred eeEEEECC-CCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758 4 VTHTVWSL-DNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL 82 (198)
Q Consensus 4 v~~~~~s~-~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 82 (198)
...++++| +|.++++-...+.|..++...+... .+...........++|+|++++++++-...+.|..++.......+
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~-~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~ 306 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQETT-PLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRL 306 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE-EEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccc
Confidence 46788999 6666665556788999998765432 222221223467899999999777776677889888765321111
Q ss_pred ccccCceEEEec--CCCcEEEEEccCCCcceeeecCCCcceE-EEEEc--------cCCCEEEEeecCCcEEEEEcCCCc
Q psy8758 83 NVHKDMTSAAAN--EDFNLYSYDIRQLNSPLNVHKDMTSAVT-SVDYS--------PTGREFVAGGYDKSLRLYLAHQGH 151 (198)
Q Consensus 83 ~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~i~-~~~~s--------p~~~~l~~~~~d~~v~v~d~~~~~ 151 (198)
. ....+.+. ..+.. | +.. ....-.... .++.. ++|.++++-...+.|+.++ ..+.
T Consensus 307 ~---~~~~~ag~~g~~g~~---d----g~~---~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~ 372 (430)
T 3tc9_A 307 T---TPYIVCGQQGAKDWV---D----GVG---KKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGR 372 (430)
T ss_dssp C---CCEEEEECTTCBCCB---C----EEG---GGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSE
T ss_pred c---ceEEEeccCCCCCCC---C----CCC---cceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCc
Confidence 0 01111111 00100 0 000 000011122 45553 3455666656677888888 3454
Q ss_pred eeeEEecc----------------CcccEEEEEEcCC-CCEEEEecCCCeEEEEecC
Q psy8758 152 SRDIYHTK----------------RMQHVTHTVWSLD-NKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 152 ~~~~~~~~----------------~~~~v~~~~~s~~-~~~l~~~~~dg~v~~w~~~ 191 (198)
.....-.+ .-.....++++|+ +.++++-..++.|+.++++
T Consensus 373 v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 373 VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 43333110 0125789999994 6666666667888888764
No 286
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.04 E-value=0.0029 Score=50.54 Aligned_cols=184 Identities=9% Similarity=0.040 Sum_probs=111.8
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee------eecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV------VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR 76 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~ 76 (198)
.|.++...+++.+.+ ++.++.+..||..+++. ..+... .....|.++...+++...+.+ .+ -+.++|..
T Consensus 216 ~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt--~~-Gl~~~~~~ 290 (795)
T 4a2l_A 216 QIQAILQQSPTRIWV-ATEGAGLFLINPKTKEI-KNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT--FN-DLNIYHEG 290 (795)
T ss_dssp CEEEEEEEETTEEEE-EEBSSCEEEEETTTTEE-EEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE--SS-CEEEEETT
T ss_pred eeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeE-EEeecCCCCccccCCCeEEEEEEcCCCCEEEEe--CC-hhheEcCC
Confidence 366677767776554 44444488888766542 222111 013458888888888876643 34 57888865
Q ss_pred CCCCc-c------------------ccccCceEEEecCCCcEEEEEccCCCcceeeecC-------CCcceEEEEEccCC
Q psy8758 77 QLNSP-L------------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD-------MTSAVTSVDYSPTG 130 (198)
Q Consensus 77 ~~~~~-~------------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-------~~~~i~~~~~sp~~ 130 (198)
+.... + ....+..+..|+.++.|..++... .....+.. ....|.++...++|
T Consensus 291 ~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~--~~~~~~~~~~~~~~l~~~~V~~i~~d~~g 368 (795)
T 4a2l_A 291 TDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIR--NRFKNIRNIPYKNSLSDNVVSCIVEDKDK 368 (795)
T ss_dssp TTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGG--GSSEEECCCTTSSSCSCSSEEEEEECTTS
T ss_pred CCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCc--ccceEEcCCCCCCCCCCCeeEEEEECCCC
Confidence 33210 0 011123466677777888888764 22222211 23458999998888
Q ss_pred CEEEEeecCCcEEEEEcCCCceeeEEec-------cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 131 REFVAGGYDKSLRLYLAHQGHSRDIYHT-------KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 131 ~~l~~~~~d~~v~v~d~~~~~~~~~~~~-------~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
.+.+ |+.++-|..||..+++....... -....|.++...++|+.|..|+.++-+..+|.++++
T Consensus 369 ~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 369 NLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp CEEE-EESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC
T ss_pred CEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 7554 56666699999887655433211 113578999998899844456666778999987764
No 287
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.03 E-value=0.0014 Score=46.46 Aligned_cols=166 Identities=5% Similarity=-0.056 Sum_probs=102.4
Q ss_pred CCeEEEEEccCCc--eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC--cc-cc------------
Q psy8758 22 EMNLRVWKAHASE--KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--PL-NV------------ 84 (198)
Q Consensus 22 d~~i~i~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--~~-~~------------ 84 (198)
...|+..++.... ....+.. ......++|++.+..|+.+-...+.|..++...... .+ ..
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~---~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~ 88 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGG---LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW 88 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEE---EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEET
T ss_pred cCeEEEEECCCCceEEEEEecC---CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEc
Confidence 4578899987653 1122222 224568999998888887766678898888765421 11 10
Q ss_pred ccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEee--cCCcEEEEEcCCCceeeEEeccCcc
Q psy8758 85 HKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGG--YDKSLRLYLAHQGHSRDIYHTKRMQ 162 (198)
Q Consensus 85 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~--~d~~v~v~d~~~~~~~~~~~~~~~~ 162 (198)
..+.++++-...+.|.++++.. ................+++.|.+..|..+. ..+.|...++......... ...-.
T Consensus 89 ~~g~ly~~d~~~~~I~~~~~dG-~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-~~~l~ 166 (318)
T 3sov_A 89 LGEKLYWTDSETNRIEVSNLDG-SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII-NSEIY 166 (318)
T ss_dssp TTTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE-CSSCS
T ss_pred CCCeEEEEECCCCEEEEEECCC-CcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE-ECCCC
Confidence 1223344445566777777764 222222223445678999999766666554 3578888888654333322 22235
Q ss_pred cEEEEEEcCCCCEEEEe-cCCCeEEEEecCC
Q psy8758 163 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHA 192 (198)
Q Consensus 163 ~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~ 192 (198)
....++++|++..|+.+ +..+.|..+|++.
T Consensus 167 ~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 167 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 67899999976665544 5678899998864
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.02 E-value=0.00011 Score=57.78 Aligned_cols=165 Identities=7% Similarity=-0.069 Sum_probs=98.2
Q ss_pred CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC-----CCCc-cc------------
Q psy8758 22 EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ-----LNSP-LN------------ 83 (198)
Q Consensus 22 d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~-----~~~~-~~------------ 83 (198)
...|+..++...+....+.. ...+..++|++.+..|+.+-...+.|+.+++.. .... +.
T Consensus 385 ~~~I~~id~~~~~~~~~~~~---~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPN---LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp TTC-CEECTTSCCEECCSCC---CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred ccceEEEeCCCCcceeeecc---CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 45677788766553333322 234678999998888887655678899988764 1111 10
Q ss_pred cccCceEEEecCCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEeec--CCcEEEEEcCCCceeeEEeccC
Q psy8758 84 VHKDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGGY--DKSLRLYLAHQGHSRDIYHTKR 160 (198)
Q Consensus 84 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~~--d~~v~v~d~~~~~~~~~~~~~~ 160 (198)
...+.++++-...+.|.++++.. .....+ .........++++|.+.+|+.+.. .+.|.++++..... ..+....
T Consensus 462 ~~~g~LY~tD~~~~~I~v~d~dg--~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~~~~ 538 (699)
T 1n7d_A 462 WIHSNIYWTDSVLGTVSVADTKG--VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTEN 538 (699)
T ss_dssp CSSSBCEECCTTTSCEEEEBSSS--CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEESCSS
T ss_pred eeCCcEEEEeccCCeEEEEecCC--CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEEeCC
Confidence 01223445555667788888764 222322 222345678899997665555443 26788877764332 2221222
Q ss_pred cccEEEEEEcCCCCEE-EEecCCCeEEEEecCC
Q psy8758 161 MQHVTHTVWSLDNKFV-ISASDEMNLRVWKAHA 192 (198)
Q Consensus 161 ~~~v~~~~~s~~~~~l-~~~~~dg~v~~w~~~~ 192 (198)
......|+|+|++..| ++-+..+.|..+++..
T Consensus 539 l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 539 IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred CCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 3456789999976544 4445678899999864
No 289
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.99 E-value=0.0038 Score=49.86 Aligned_cols=183 Identities=9% Similarity=0.030 Sum_probs=114.3
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee------eecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV------VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR 76 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~ 76 (198)
.|.++...++|++.+ |+.+ -|.+|+..+++. ..+... .....|.++...+++...+. +.++-+..++..
T Consensus 264 ~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWig--t~~~Gl~~~~~~ 338 (795)
T 4a2l_A 264 YIRSLAMDSQNRLWI-GTFN-DLNIYHEGTDSF-ASYSSNPVENGSLSQRSVRSIFMDSQGGMWLG--TYFGGLNYYHPI 338 (795)
T ss_dssp BEEEEEECTTSCEEE-EESS-CEEEEETTTTEE-EEECCCTTSTTSCSSSCEEEEEECTTSCEEEE--ESSSCEEEECGG
T ss_pred eEEEEEEcCCCCEEE-EeCC-hhheEcCCCCeE-EEEecCCCCCCCCCCCcEEEEEEeCCcCEEEE--ECCCCeEEeCCC
Confidence 478888888887554 4445 488888766542 222110 12346888988888876653 466678888764
Q ss_pred CCCCc-c-----------------ccccCceEEEecCCCcEEEEEccCCCcceeeecC---------CCcceEEEEEccC
Q psy8758 77 QLNSP-L-----------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD---------MTSAVTSVDYSPT 129 (198)
Q Consensus 77 ~~~~~-~-----------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---------~~~~i~~~~~sp~ 129 (198)
..... + ....+..+..|+.++.|..|+..+ . ....+.. ....|.++...++
T Consensus 339 ~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~-~-~~~~~~~~~~~~~~~l~~~~v~~i~~d~~ 416 (795)
T 4a2l_A 339 RNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTNDGGLNLYNPIT-Q-RFTSYTLQEDESARGIGSNNIKAVYVDEK 416 (795)
T ss_dssp GGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESSSCEEEECTTT-C-CEEEECCC------CCSCSCEEEEEEETT
T ss_pred cccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECCCCeEEEcCCC-C-cEEEEecCCCCcccCCCCccEEEEEEcCC
Confidence 32210 0 011123466677777888888775 2 2222211 2356889999888
Q ss_pred CCEEEEeecCCcEEEEEcCCCceeeEEec---cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 130 GREFVAGGYDKSLRLYLAHQGHSRDIYHT---KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 130 ~~~l~~~~~d~~v~v~d~~~~~~~~~~~~---~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
|+.|-.|+.++-+..||..+++....... .....|.++...++|++.+... + -+.+||.++++
T Consensus 417 g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~ 482 (795)
T 4a2l_A 417 KSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRS 482 (795)
T ss_dssp TTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTE
T ss_pred CCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCe
Confidence 88455666667799999988765433210 1235799999998888666543 4 48888887654
No 290
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.98 E-value=0.001 Score=45.55 Aligned_cols=116 Identities=8% Similarity=0.142 Sum_probs=78.2
Q ss_pred cCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeec-CCCcceEE
Q psy8758 45 SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTS 123 (198)
Q Consensus 45 ~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~ 123 (198)
...+..++|+|++..++++...++.|...|.. ++.++.+. ........
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-------------------------------g~v~~~i~l~g~~D~EG 74 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-------------------------------GDLIRTIPLDFVKDLET 74 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT-------------------------------CCEEEEEECSSCSSEEE
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-------------------------------CCEEEEEecCCCCChHH
Confidence 34688999999988888877778888888765 23333332 12245778
Q ss_pred EEEccCCCEEEEeecCCcEEEEEcCCCce---eeEEe-----ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758 124 VDYSPTGREFVAGGYDKSLRLYLAHQGHS---RDIYH-----TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 124 ~~~sp~~~~l~~~~~d~~v~v~d~~~~~~---~~~~~-----~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
+++.+++.++++.-.++.+.++++..... ..... ...+.....++|+|.++.|.++.+.....+|.++
T Consensus 75 Ia~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 75 IEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp EEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred eEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 89999888777765678899998876442 12221 1224457899999998777766655555555554
No 291
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.96 E-value=0.0022 Score=46.17 Aligned_cols=70 Identities=16% Similarity=0.149 Sum_probs=47.0
Q ss_pred cceEEEEEccCCCEEEEeec-----------------CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe-c
Q psy8758 119 SAVTSVDYSPTGREFVAGGY-----------------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA-S 180 (198)
Q Consensus 119 ~~i~~~~~sp~~~~l~~~~~-----------------d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~ 180 (198)
...+.+++.++|++.++... .+.|..+|. ++..... ..-...+.++|+||+++|+.+ +
T Consensus 165 ~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~~~~~--~~l~~pNGia~spDg~~lYvadt 240 (355)
T 3sre_A 165 PSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDVRVVA--EGFDFANGINISPDGKYVYIAEL 240 (355)
T ss_dssp SSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCCEEEE--EEESSEEEEEECTTSSEEEEEEG
T ss_pred CCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeEEEee--cCCcccCcceECCCCCEEEEEeC
Confidence 35789999999998877541 234444444 4332222 222467899999999877655 5
Q ss_pred CCCeEEEEecCC
Q psy8758 181 DEMNLRVWKAHA 192 (198)
Q Consensus 181 ~dg~v~~w~~~~ 192 (198)
..+.|+.|+++.
T Consensus 241 ~~~~I~~~~~~~ 252 (355)
T 3sre_A 241 LAHKIHVYEKHA 252 (355)
T ss_dssp GGTEEEEEEECT
T ss_pred CCCeEEEEEECC
Confidence 678999999863
No 292
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.92 E-value=0.0051 Score=49.11 Aligned_cols=166 Identities=7% Similarity=-0.058 Sum_probs=101.8
Q ss_pred CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCC-----C-ccc------------
Q psy8758 22 EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLN-----S-PLN------------ 83 (198)
Q Consensus 22 d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~-----~-~~~------------ 83 (198)
...|+..++...+....+. ....+..++|++....|+.+-...+.|+.+++.... . .+.
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~---~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIP---NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 479 (791)
T ss_dssp BSSEEEECTTSCCCEEEEC---SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred ccceeEeeccCCcceeeec---CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence 3457777776554322222 234567899999878888776667788888876421 1 111
Q ss_pred cccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeec--CCcEEEEEcCCCceeeEEeccCc
Q psy8758 84 VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY--DKSLRLYLAHQGHSRDIYHTKRM 161 (198)
Q Consensus 84 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~--d~~v~v~d~~~~~~~~~~~~~~~ 161 (198)
...+.++++-...+.|.+.++.. ......+.........|+++|.+.+|+.... .+.|...++........+ ...-
T Consensus 480 ~~~~~LY~tD~~~~~I~v~~ldG-~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv-~~~l 557 (791)
T 3m0c_C 480 WIHSNIYWTDSVLGTVSVADTKG-VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-TENI 557 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTS-SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE-CSSC
T ss_pred ecCCcEEEEecCCCeEEEEeCCC-CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE-eCCC
Confidence 11224555666677788888764 2222222333445789999998666665542 367989888765544443 3333
Q ss_pred ccEEEEEEcCCCCEEEEe-cCCCeEEEEecCC
Q psy8758 162 QHVTHTVWSLDNKFVISA-SDEMNLRVWKAHA 192 (198)
Q Consensus 162 ~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~ 192 (198)
.....|++++.+..|+.+ ...+.|...+++.
T Consensus 558 ~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 558 QWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 578899999876666555 4567888888754
No 293
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.91 E-value=0.0045 Score=48.09 Aligned_cols=188 Identities=5% Similarity=-0.045 Sum_probs=105.0
Q ss_pred ceeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 3 HVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
...+++|++.+..|+.+. ..+.|..++++.......+... .-.....+++.+.+..++.+-...+.|.+.++......
T Consensus 41 ~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~-~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~ 119 (619)
T 3s94_A 41 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS-GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 119 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECS-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeC-CCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE
Confidence 467889998666666554 4577888887644211222111 11356789999988888887667888999988654321
Q ss_pred -cc-------------cccCceEEEe-cCCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEe-ecCCcEEE
Q psy8758 82 -LN-------------VHKDMTSAAA-NEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAG-GYDKSLRL 144 (198)
Q Consensus 82 -~~-------------~~~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~-~~d~~v~v 144 (198)
+. ...+.++++- +..+.|...++.. .....+ ...-...+.++++|+++.|..+ ...+.|..
T Consensus 120 ~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG--~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~ 197 (619)
T 3s94_A 120 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG--SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 197 (619)
T ss_dssp EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS--CSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC--CceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEE
Confidence 11 0111222222 1234444444442 222222 2234457899999976655555 45678999
Q ss_pred EEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 145 YLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 145 ~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
+|+......... .+......++++..+ ..+.+-...+.|...|..+|+.
T Consensus 198 ~~~dG~~~~~~~-~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~ 246 (619)
T 3s94_A 198 SNLDGTNRQAVV-KGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEG 246 (619)
T ss_dssp ESSSCCEEC----------CCCEEESSS-EEEEECTTTCSEEEEESSSCCC
T ss_pred ecCCCCccEEEE-eCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcc
Confidence 998764443332 211223346677655 4444555678899999887764
No 294
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.89 E-value=0.0049 Score=47.93 Aligned_cols=186 Identities=3% Similarity=-0.111 Sum_probs=111.0
Q ss_pred ceeEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 3 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
.+.+++|++.+..|+.+ ..++.|+.++++.... ..+... .......+++.+.+..|+.+-...+.|.+.++......
T Consensus 38 ~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-~~v~~~-g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~ 115 (628)
T 4a0p_A 38 EASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-EHVVEF-GLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ 115 (628)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCE
T ss_pred ceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-EEEEeC-CCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE
Confidence 46689999866655544 4678888888865432 222221 12346788998888888877666788999987643321
Q ss_pred cc---cc-----------cCceEEEe-cCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEe-ecCCcEEEE
Q psy8758 82 LN---VH-----------KDMTSAAA-NEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAG-GYDKSLRLY 145 (198)
Q Consensus 82 ~~---~~-----------~~~~~~~~-~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~-~~d~~v~v~ 145 (198)
.. .- .+.++.+- +..+.|...++.. .....+...-.....++++++++.|..+ ...+.|..+
T Consensus 116 ~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG--~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~ 193 (628)
T 4a0p_A 116 VLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG--SERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESS 193 (628)
T ss_dssp EEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCC--CceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEE
Confidence 11 11 11122222 1234455555543 2233332344567899999987766555 456789999
Q ss_pred EcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 146 LAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 146 d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
|+..... ..+ ........++++.. +..+.+-...+.|...|..+|+.
T Consensus 194 d~dG~~~-~v~-~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 194 NMLGLNR-EVI-ADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp ETTSCSC-EEE-EECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred cCCCCce-EEe-eccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCc
Confidence 9876544 233 22234456777765 44555555678899888777653
No 295
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.85 E-value=0.0022 Score=42.78 Aligned_cols=150 Identities=8% Similarity=-0.001 Sum_probs=80.8
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCce------eeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEK------LGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR 76 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~ 76 (198)
.+.+++|+|+|.+.++ .+|.+.-.+..+... ...+....-. ....+.|.|++...++ .||.|+-++..
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav---~dG~iyr~~pP 115 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV---SKDKLYKASPP 115 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE---ETTEEEEESCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe---CCCEEEEeCCC
Confidence 4678999999986666 667665555433211 1111111111 1367889999887765 35877766643
Q ss_pred CCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCc-----
Q psy8758 77 QLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH----- 151 (198)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~----- 151 (198)
+.... -|- ..-...-...=..+..+.+.|+|.+.+.. |+.++-.....+.
T Consensus 116 ~~~~~-------------------~Wl----~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl 170 (236)
T 1tl2_A 116 QSDTD-------------------NWI----ARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWL 170 (236)
T ss_dssp CSTTC-------------------CHH----HHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHH
T ss_pred cCCCC-------------------cee----ccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccc
Confidence 21000 000 00011111122457899999999977777 7765443333221
Q ss_pred -eeeEEeccCcccEEEEEEcCCCCEEEEecCCCeE
Q psy8758 152 -SRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNL 185 (198)
Q Consensus 152 -~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v 185 (198)
....+-...-..-..+.|.|++.+.+.. ++.+
T Consensus 171 ~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 171 ARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp HHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred cccceeccCCcceEEEEEECCCCcEEEEe--CCeE
Confidence 1111211222345667899999877765 6744
No 296
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.85 E-value=0.0067 Score=48.34 Aligned_cols=184 Identities=11% Similarity=0.034 Sum_probs=107.1
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeee--eeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRK--VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS 80 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~ 80 (198)
.|.++...++|++. .|+.++-+..|+..++.. ..+.. ......|.++...+++...+ |..++-+..++..+...
T Consensus 364 ~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~v~~i~~d~~g~lWi--gt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 364 VVSSVCDDGQGKLW-IGTDGGGINVFENGKRVA-IYNKENRELLSNSVLCSLKDSEGNLWF--GTYLGNISYYNTRLKKF 439 (781)
T ss_dssp CEEEEEECTTSCEE-EEEBSSCEEEEETTEEEE-ECC-----CCCSBEEEEEECTTSCEEE--EETTEEEEEECSSSCEE
T ss_pred ceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeE-EEccCCCCCCCcceEEEEECCCCCEEE--EeccCCEEEEcCCCCcE
Confidence 47788888777644 456556688888754322 11111 11235678888887777655 34556678887653221
Q ss_pred c-c-------------ccccCceEEEecCCCcEEEEEccCCCcceeeecCC-----CcceEEEEEccCCCEEEEeecCCc
Q psy8758 81 P-L-------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDM-----TSAVTSVDYSPTGREFVAGGYDKS 141 (198)
Q Consensus 81 ~-~-------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----~~~i~~~~~sp~~~~l~~~~~d~~ 141 (198)
. + ....+..+..++. +.+..+|..+ .+........ ...+.++...++|++.+.....|
T Consensus 440 ~~~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G- 516 (781)
T 3v9f_A 440 QIIELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLAS-KKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG- 516 (781)
T ss_dssp EECCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSS-SSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-
T ss_pred EEeccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCC-CeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-
Confidence 0 0 0111223444555 5688888775 2222211111 35689999999888665543344
Q ss_pred EEEEEcCCCceeeEEec--cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 142 LRLYLAHQGHSRDIYHT--KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 142 v~v~d~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
+..||..+++....... -....|.++...++|.+.++.. +|.+..||.++++
T Consensus 517 l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 517 VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFD 570 (781)
T ss_dssp EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCC
T ss_pred EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCc
Confidence 77788877654332111 1135689999999998766544 6655888877654
No 297
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.82 E-value=0.0021 Score=46.32 Aligned_cols=60 Identities=18% Similarity=0.118 Sum_probs=36.8
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee-----eecCceeeEEeCCC---CCeEEEE
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV-----VMSLRSNMVSWNPM---EAFVFTA 63 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~---~~~~~~~ 63 (198)
.-..++|.|+|+.++++...|.|++++.. +.....+... ........++|+|+ +..++++
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 35689999999944455677999988853 3321111111 11234578999996 5556554
No 298
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.79 E-value=0.0046 Score=44.50 Aligned_cols=58 Identities=14% Similarity=0.181 Sum_probs=37.1
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee----ecCceeeEEeCCC---CCeEEEEe
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV----MSLRSNMVSWNPM---EAFVFTAA 64 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~---~~~~~~~~ 64 (198)
.-..++|.|+|++++ +..+|.|++++ +++ ...+.... .......++|+|+ +..++++-
T Consensus 32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~ 96 (352)
T 2ism_A 32 VPWALAFLPDGGMLI-AERPGRIRLFR--EGR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYR 96 (352)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEE--TTE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CceEEEEcCCCeEEE-EeCCCeEEEEE--CCC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEE
Confidence 346899999998554 45678999888 443 22222111 1345688999998 56666543
No 299
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.76 E-value=0.0048 Score=43.81 Aligned_cols=161 Identities=6% Similarity=0.018 Sum_probs=91.4
Q ss_pred ceeEEEE---CCCCceEEEee-------------CCCeEEEEEcc---CCceeeeeee--eee---------cCceeeEE
Q psy8758 3 HVTHTVW---SLDNKFVISAS-------------DEMNLRVWKAH---ASEKLGPIRK--VVM---------SLRSNMVS 52 (198)
Q Consensus 3 ~v~~~~~---s~~~~~l~~~~-------------~d~~i~i~~~~---~~~~~~~~~~--~~~---------~~~v~~~~ 52 (198)
.+..+.| .|+++++++.. .+..+..||+. +++....+.- ... ......++
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDva 143 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSA 143 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeE
Confidence 3578999 68888777543 26779999998 6664433321 100 12367888
Q ss_pred eCCCCCeEEEEecCC-ccEEEEeccCCCCccccccCceEEEecCCCc-EEEEEccCCCcceeeecCCCcceEEEEEccCC
Q psy8758 53 WNPMEAFVFTAANED-FNLYSYDIRQLNSPLNVHKDMTSAAANEDFN-LYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG 130 (198)
Q Consensus 53 ~~~~~~~~~~~~~~d-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~ 130 (198)
..++|+..++ ++.. +.|...+. ||+ +..|.+..+ . .......+.|+++|+|
T Consensus 144 vD~~GnaYVt-~s~~~~~I~rV~p--------------------dG~~~~~~~~~~~-~-----~~~~~G~nGIv~~pdg 196 (334)
T 2p9w_A 144 QDRDGNSYVA-FALGMPAIARVSA--------------------DGKTVSTFAWESG-N-----GGQRPGYSGITFDPHS 196 (334)
T ss_dssp ECTTSCEEEE-EEESSCEEEEECT--------------------TSCCEEEEEECCC-C-----SSSCCSCSEEEEETTT
T ss_pred ECCCCCEEEe-CCCCCCeEEEEeC--------------------CCCEEeeeeecCC-C-----cccccCcceEEEeCCC
Confidence 8888887664 3344 44444443 332 455554431 1 1112346789999999
Q ss_pred CEEEEeecCCcEEEEEcCCCceeeEEec--cC---cccEEEE-EEcCCCCE-EEEecCCCeEEEEec
Q psy8758 131 REFVAGGYDKSLRLYLAHQGHSRDIYHT--KR---MQHVTHT-VWSLDNKF-VISASDEMNLRVWKA 190 (198)
Q Consensus 131 ~~l~~~~~d~~v~v~d~~~~~~~~~~~~--~~---~~~v~~~-~~s~~~~~-l~~~~~dg~v~~w~~ 190 (198)
+.|++....+.+..+|+........-.. +. ......+ .--.+|+. |++....+.+.+.+.
T Consensus 197 ~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~ 263 (334)
T 2p9w_A 197 NKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSW 263 (334)
T ss_dssp TEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECS
T ss_pred CEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECC
Confidence 9888876699999999985332111111 21 1223343 23346776 444445555555443
No 300
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.73 E-value=0.0072 Score=45.10 Aligned_cols=60 Identities=8% Similarity=0.164 Sum_probs=37.2
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeee-------ecCceeeEEeCCC---CCeEEEE
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVV-------MSLRSNMVSWNPM---EAFVFTA 63 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-------~~~~v~~~~~~~~---~~~~~~~ 63 (198)
.-..++|.|+|+++++-...+.|++++..+++. ..+.... .......++|+|+ +..++++
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~-~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~ 97 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSV-KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYIS 97 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEE
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcE-eEEecCCccccccCCCCceeEEEECCCcCcCCEEEEE
Confidence 456899999999776654445788887654542 2222111 1344568999996 5566554
No 301
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.65 E-value=0.0063 Score=43.83 Aligned_cols=57 Identities=7% Similarity=0.018 Sum_probs=36.6
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee----eecCceeeEEeCCC---CCeEEEE
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV----VMSLRSNMVSWNPM---EAFVFTA 63 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~---~~~~~~~ 63 (198)
.-..++|.|+|++++ +..+|.|++++ .+++ ..+... ........++++|+ +..++++
T Consensus 30 ~P~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~ 93 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLV-TERPGRLVLIS-PSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLY 93 (354)
T ss_dssp CEEEEEEEETTEEEE-EETTTEEEEEC-SSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred CCeEEEEcCCCeEEE-EeCCCEEEEEe-CCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEE
Confidence 356899999998554 45668998887 3443 223211 11245688999997 5566554
No 302
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.58 E-value=0.011 Score=43.45 Aligned_cols=121 Identities=12% Similarity=0.109 Sum_probs=74.4
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCcee-e--------eeeeee-------ecCceeeEEeCCCC---CeEEEE
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL-G--------PIRKVV-------MSLRSNMVSWNPME---AFVFTA 63 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~-~--------~~~~~~-------~~~~v~~~~~~~~~---~~~~~~ 63 (198)
.|..+..||+|++||..+.. .|.|-.+..+... . ..+... ...+|..+.|+|-+ ..+++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 46789999999999988654 7999888733210 0 011111 24578999999954 456654
Q ss_pred ecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEE--eecCCc
Q psy8758 64 ANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVA--GGYDKS 141 (198)
Q Consensus 64 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~--~~~d~~ 141 (198)
..|+.|++||+.... +.-. +++. .....-.......+.+++|.+++-.|.. ....|.
T Consensus 146 -tsD~~Ir~yDl~~s~----------------~~P~---~L~k-~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GD 204 (452)
T 3pbp_A 146 -KEDDTITMFDILNSQ----------------EKPI---VLNK-PNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGD 204 (452)
T ss_dssp -ETTSCEEEEETTCTT----------------SCCE---EESC-CCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCE
T ss_pred -ecCCEEEEEEcccCC----------------CCCc---chhc-cccccCCCcccceEEEEEEcCCCcEEEEEecCCCCC
Confidence 578999999987521 0001 1111 1111222333467889999998776655 447777
Q ss_pred EEEE
Q psy8758 142 LRLY 145 (198)
Q Consensus 142 v~v~ 145 (198)
|+-.
T Consensus 205 IYAl 208 (452)
T 3pbp_A 205 IFAF 208 (452)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7544
No 303
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.50 E-value=0.0024 Score=45.62 Aligned_cols=178 Identities=11% Similarity=0.019 Sum_probs=95.2
Q ss_pred ceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEe--CCCCCeEEEEe-cCCccEEEEeccCCCCc---------
Q psy8758 14 KFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSW--NPMEAFVFTAA-NEDFNLYSYDIRQLNSP--------- 81 (198)
Q Consensus 14 ~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~-~~d~~i~~~d~~~~~~~--------- 81 (198)
..++.++.||.|.-+|..+|+..-.+... ...++....- .+.+..+++.. ..||.+..++..+....
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 46888999999999999998866555432 1111111100 01122333332 46788877776543221
Q ss_pred ----cccc------------cCceEEEecCCCcEEEEEccCCCcceeeecCCCc-c------eEEEEEc-----cCCCEE
Q psy8758 82 ----LNVH------------KDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTS-A------VTSVDYS-----PTGREF 133 (198)
Q Consensus 82 ----~~~~------------~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~------i~~~~~s-----p~~~~l 133 (198)
+... .+..+++++.++.+...|+++ ++.+..+..... . ..|.... -.+..+
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~t-G~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLN-GEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTT-CCEEEEESTTCBCC--------------------CCEE
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCC-CcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 1111 355678999999999999999 788777753211 0 0111111 123567
Q ss_pred EEeecCCcEEEEEcCCCceeeEEe----ccCc--ccE-EEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 134 VAGGYDKSLRLYLAHQGHSRDIYH----TKRM--QHV-THTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 134 ~~~~~d~~v~v~d~~~~~~~~~~~----~~~~--~~v-~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
+.+..+..+.+.+ ++++ +.... .... ..+ .+-..+.|+.+++ ++.||.|.-+|..+|+.+
T Consensus 169 ~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~~-~~~dg~v~A~d~~~G~~~ 235 (339)
T 2be1_A 169 VIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCIA-PFRDKSLLASDLDFRIAR 235 (339)
T ss_dssp EEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCEE-EETTTEEEEECSTTCCEE
T ss_pred EEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEEE-ECCCCEEEEEECCCCcEE
Confidence 7777777777766 4443 22110 0000 000 0000123456544 677888888888877654
No 304
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.47 E-value=0.027 Score=44.90 Aligned_cols=183 Identities=6% Similarity=-0.062 Sum_probs=107.8
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeee--------eeecCceeeEEeCCCCCeEEEEecCCccEEEEe
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRK--------VVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYD 74 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d 74 (198)
.|.++...++|. |-.|+.++-|..++...+.. ..+.. ......|.++...+++...+. ..++-+..++
T Consensus 314 ~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWig--t~~~Gl~~~~ 389 (781)
T 3v9f_A 314 SARYIFQDSFNN-IWIGTWGGGINFISNAPPTF-HTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIG--TDGGGINVFE 389 (781)
T ss_dssp CEEEEEECSSCC-EEEEEBSSCEEEECSSCCSC-EEEC----CCCSSCCSSSCEEEEEECTTSCEEEE--EBSSCEEEEE
T ss_pred eEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcc-eeeccCccccccCCCCCcceEEEEEcCCCCEEEE--eCCCcEEEEE
Confidence 477888888776 44466666688888765432 22211 012345788888887776543 3455677777
Q ss_pred ccCCCCc-c--------------ccccCceEEEecCCCcEEEEEccCCCcceeeec---CCCcceEEEEEccCCCEEEEe
Q psy8758 75 IRQLNSP-L--------------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK---DMTSAVTSVDYSPTGREFVAG 136 (198)
Q Consensus 75 ~~~~~~~-~--------------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~---~~~~~i~~~~~sp~~~~l~~~ 136 (198)
..+.... + ....+..+..|+.++.+..+|..+ + ....+. .....|.++...++|++.+..
T Consensus 390 ~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~-~-~~~~~~~~~~~~~~v~~i~~d~~g~lwigt 467 (781)
T 3v9f_A 390 NGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRL-K-KFQIIELEKNELLDVRVFYEDKNKKIWIGT 467 (781)
T ss_dssp TTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSS-C-EEEECCSTTTCCCCEEEEEECTTSEEEEEE
T ss_pred CCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCC-C-cEEEeccCCCCCCeEEEEEECCCCCEEEEE
Confidence 6532110 0 001122345556556677777764 2 233332 134578899888888755544
Q ss_pred ecCCcEEEEEcCCCceeeEEecc----CcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 137 GYDKSLRLYLAHQGHSRDIYHTK----RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 137 ~~d~~v~v~d~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
. +-+..||..+++........ ....|.++...++|++.+.....| +..+|.++++
T Consensus 468 -~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~ 526 (781)
T 3v9f_A 468 -H-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQL 526 (781)
T ss_dssp -T-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCE
T ss_pred -C-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCe
Confidence 3 45889998876654433111 135789999999998766443344 6778776543
No 305
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.46 E-value=0.015 Score=41.72 Aligned_cols=100 Identities=14% Similarity=0.177 Sum_probs=67.3
Q ss_pred EEEecC--CCcEEEEEccCCCcceeeecC------CC-cceEEEEE--ccC-CC-EEEEeecCCcEEEEEcC-------C
Q psy8758 90 SAAANE--DFNLYSYDIRQLNSPLNVHKD------MT-SAVTSVDY--SPT-GR-EFVAGGYDKSLRLYLAH-------Q 149 (198)
Q Consensus 90 ~~~~~~--~~~i~~~d~~~~~~~~~~~~~------~~-~~i~~~~~--sp~-~~-~l~~~~~d~~v~v~d~~-------~ 149 (198)
+++... +.+|.+|++.....++..+.. .. ..+..+++ +|. ++ ++++...+|.+..|++. +
T Consensus 90 ~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~ 169 (355)
T 3amr_A 90 AASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYIS 169 (355)
T ss_dssp EEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEE
T ss_pred EEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCccc
Confidence 444445 689999977422334555522 11 45666777 775 44 67788889999999883 2
Q ss_pred CceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758 150 GHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 150 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
.+.+..+..+ +.+..+...+....|+.+-++..|+.++.+
T Consensus 170 ~~lVR~f~lg--sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~ 209 (355)
T 3amr_A 170 GKKVRAFKMN--SQTEGMAADDEYGRLYIAEEDEAIWKFSAE 209 (355)
T ss_dssp EEEEEEEECS--SCEEEEEEETTTTEEEEEETTTEEEEEECS
T ss_pred ceEEEEecCC--CCcceEEEcCCCCeEEEecccceEEEEeCC
Confidence 3444444333 678899999988889989888777777754
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.42 E-value=0.014 Score=40.67 Aligned_cols=176 Identities=14% Similarity=0.129 Sum_probs=86.4
Q ss_pred CCceEEEeeCC-----CeEEEEEccCCce--eeeeeeeeecCceeeEEeCCCCCeEEEEecCC-----ccEEEEeccCCC
Q psy8758 12 DNKFVISASDE-----MNLRVWKAHASEK--LGPIRKVVMSLRSNMVSWNPMEAFVFTAANED-----FNLYSYDIRQLN 79 (198)
Q Consensus 12 ~~~~l~~~~~d-----~~i~i~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~ 79 (198)
+++.++.|+.+ ..+.+||+.+.+. -..+........-.+++. .++ .+++.|+.+ ..+.+||..+..
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-LGD-MIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-ETT-EEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE-ECC-EEEEEcccCCCcccceEEEEcCCCCe
Confidence 45666666644 4688889876551 122221111111111222 233 455555432 357888876533
Q ss_pred Cc-------------cccccCceEEEecCC-----CcEEEEEccCCCcceee--ecCCCcceEEEEEccCCCEEEEeecC
Q psy8758 80 SP-------------LNVHKDMTSAAANED-----FNLYSYDIRQLNSPLNV--HKDMTSAVTSVDYSPTGREFVAGGYD 139 (198)
Q Consensus 80 ~~-------------~~~~~~~~~~~~~~~-----~~i~~~d~~~~~~~~~~--~~~~~~~i~~~~~sp~~~~l~~~~~d 139 (198)
-. .....+.+++.|+.+ ..+..||+.+ ..-... +.........+.+ +++.++.|+.+
T Consensus 140 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~-~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 216 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHT-GHWTNVTPMATKRSGAGVALL--NDHIYVVGGFD 216 (301)
T ss_dssp EEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTT-TEEEEECCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred EEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCC-CcEEeCCCCCcccccceEEEE--CCEEEEEeCCC
Confidence 11 011123455665543 4578888875 222111 1111111122222 56777787764
Q ss_pred -----CcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758 140 -----KSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE 194 (198)
Q Consensus 140 -----~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~ 194 (198)
..+.+||+.+.+....-..... .....+. -++++++.|+.+ ..+.+||+++.+
T Consensus 217 ~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 217 GTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 4689999988765443211111 1112222 267777777654 467888887643
No 307
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.42 E-value=0.014 Score=40.68 Aligned_cols=176 Identities=9% Similarity=0.063 Sum_probs=84.3
Q ss_pred CCceEEEeeCC-----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC-----ccEEEEeccCCCCc
Q psy8758 12 DNKFVISASDE-----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED-----FNLYSYDIRQLNSP 81 (198)
Q Consensus 12 ~~~~l~~~~~d-----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~~~ 81 (198)
+++.++.|+.+ ..+.+||..+.+- ..+........-.+++. -++. +++.|+.+ ..+..||..+..-.
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W~ 137 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQW-TSVANMRDRRSTLGAAV-LNGL-LYAVGGFDGSTGLSSVEAYNIKSNEWF 137 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEE-ETTE-EEEEEEECSSCEEEEEEEEETTTTEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCce-eeCCCCCccccceEEEE-ECCE-EEEEcCCCCCccCceEEEEeCCCCeEe
Confidence 55666666643 3577888876542 22221111111111222 2344 44444433 34677887643210
Q ss_pred --------c-----ccccCceEEEecC-------CCcEEEEEccCCCccee--eecCCCcceEEEEEccCCCEEEEeecC
Q psy8758 82 --------L-----NVHKDMTSAAANE-------DFNLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTGREFVAGGYD 139 (198)
Q Consensus 82 --------~-----~~~~~~~~~~~~~-------~~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~~~l~~~~~d 139 (198)
. ....+.+++.|+. ...+..||+.+ ..-.. .+.........+.+ +++.++.|+.+
T Consensus 138 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 214 (302)
T 2xn4_A 138 HVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATT-NEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHD 214 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTT-TEEEEECCCSSCCBSCEEEEE--TTEEEEECCBS
T ss_pred ecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCC-CcEEECCCCccccccccEEEE--CCEEEEECCCC
Confidence 0 1112344555543 24578888875 22111 11111111222222 57777888764
Q ss_pred -----CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758 140 -----KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE 194 (198)
Q Consensus 140 -----~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~ 194 (198)
..+.+||+.+.+....-.......-..+ ...++++++.|+.+ ..+.+||+.+.+
T Consensus 215 ~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~-~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGV-CAVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE-EEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCcccceEEEEeCCCCCEeeCCCCCCccccCeE-EEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 4689999988765443211111010111 12266777777654 348999987643
No 308
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.42 E-value=0.027 Score=43.78 Aligned_cols=156 Identities=4% Similarity=-0.053 Sum_probs=90.8
Q ss_pred ceeEEEECCCCceEEEe-eCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc
Q psy8758 3 HVTHTVWSLDNKFVISA-SDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP 81 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~-~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~ 81 (198)
.+.+++|.+.+..|+.+ ...+.|+.++++.... ..+... .-..+..+++.+.+..|+.+-...+.|.+.++...
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~-~~v~~~-~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~--- 424 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGS-QFVVTA-QIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGT--- 424 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC---
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCcc-EEEEEC-CCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCC---
Confidence 45678888855555444 3567788888765332 222211 12345678888777777776555667777766532
Q ss_pred cccccCceEEEecCCCcEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEee--cCCcEEEEEcCCCceeeEEec
Q psy8758 82 LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGG--YDKSLRLYLAHQGHSRDIYHT 158 (198)
Q Consensus 82 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~--~d~~v~v~d~~~~~~~~~~~~ 158 (198)
....+ ...-.....+++.|....|..+. ....|...++......... .
T Consensus 425 ----------------------------~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~-~ 475 (619)
T 3s94_A 425 ----------------------------MRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLV-N 475 (619)
T ss_dssp ----------------------------SCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-C
T ss_pred ----------------------------eEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEE-e
Confidence 11111 22234567899998744454443 2356766666543333222 3
Q ss_pred cCcccEEEEEEcCCCCEEEEe-cCCCeEEEEecCC
Q psy8758 159 KRMQHVTHTVWSLDNKFVISA-SDEMNLRVWKAHA 192 (198)
Q Consensus 159 ~~~~~v~~~~~s~~~~~l~~~-~~dg~v~~w~~~~ 192 (198)
..-.....+++++++..|+.+ +..+.|...+++.
T Consensus 476 ~~l~~P~GlalD~~~~~LY~aD~~~~~I~~~~~dG 510 (619)
T 3s94_A 476 TSLGWPNGLALDYDEGKIYWGDAKTDKIEVMNTDG 510 (619)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEESSS
T ss_pred CCCCCCeeeEEcccCCEEEEEECCCCEEEEEecCC
Confidence 334567889999876666555 4456788887753
No 309
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.42 E-value=0.015 Score=40.90 Aligned_cols=157 Identities=9% Similarity=0.075 Sum_probs=73.6
Q ss_pred EEECCCCceEEEeeCC--------------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEe---cCCcc
Q psy8758 7 TVWSLDNKFVISASDE--------------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAA---NEDFN 69 (198)
Q Consensus 7 ~~~s~~~~~l~~~~~d--------------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~d~~ 69 (198)
--++++|.+|+-.... ..|+..+++..+. ..+.. . ....|+++++.|+.+. .....
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~-~~l~~----~--~~~~~s~~g~~Iy~~~~~~~~~~~ 130 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS-TVLDP----D--PCIYASLIGNYIYYLHYDTQTATS 130 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC-EEEEC----S--CEEEEEEETTEEEEEEESSSSCEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc-eEeec----C--CccEEEEeCCEEEEEeecCCCCce
Confidence 3467888887766542 3566666655442 22221 1 1336788899988764 23445
Q ss_pred EEEEeccCCCC-c--------cccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCC
Q psy8758 70 LYSYDIRQLNS-P--------LNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDK 140 (198)
Q Consensus 70 i~~~d~~~~~~-~--------~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~ 140 (198)
|...++..... . +......++.+.....+|...++.. .. .+.+.. ... ...++|++++|+-....+
T Consensus 131 Iy~~~~dGs~~~~lt~~~~~~~~~~g~~iy~t~~g~~~Iy~~~l~g-~~-~~~l~~--~~~-~~~~~P~g~~iy~t~~~~ 205 (302)
T 3s25_A 131 LYRIRIDGEEKKKIKNHYLFTCNTSDRYFYYNNPKNGQLYRYDTAS-QS-EALFYD--CNC-YKPVVLDDTNVYYMDVNR 205 (302)
T ss_dssp EEEEETTSCCCEEEESSCCCCSEEETTEEEEECTTTCCEEEEETTT-TE-EEEEEC--SCE-EEEEEEETTEEEEEEGGG
T ss_pred EEEEECCCCCeEEEeCCCceEeeEECCEEEEEeCCCceEEEEECCC-CC-EEEEeC--CCc-cceeeecCCEEEEEEcCC
Confidence 55555542211 1 1111122233333345555555543 22 222221 222 234556766666655432
Q ss_pred --cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecC
Q psy8758 141 --SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASD 181 (198)
Q Consensus 141 --~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 181 (198)
.|..-++..+... .+ ... ....|+|++++|..+..
T Consensus 206 ~~~I~~~~ldG~~~~-~L----t~~-~~~~~~~~g~~Iy~~~~ 242 (302)
T 3s25_A 206 DNAIVHVNINNPNPV-VL----TEA-NIEHYNVYGSLIFYQRG 242 (302)
T ss_dssp TTEEEEECSSSCCCE-EC----SCS-CEEEEEEETTEEEEEEC
T ss_pred CcEEEEEECCCCCeE-EE----eCC-CcceEEECCCEEEEEEC
Confidence 2333333333221 11 022 23456777776665543
No 310
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.40 E-value=0.017 Score=41.02 Aligned_cols=181 Identities=8% Similarity=0.139 Sum_probs=110.5
Q ss_pred EEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc---cc
Q psy8758 7 TVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP---LN 83 (198)
Q Consensus 7 ~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~---~~ 83 (198)
.-.+|..+.+|.-. ...++++|++++.. ++.+.....|.--.|-.+...-+++ +..++-|++.....+ +.
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~k---lks~~~~e~VvfWkWis~~~L~lVT---~taVyHWs~~~~s~P~kvFd 144 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSK---MKAHTMTDDVTFWKWISLNTVALVT---DNAVYHWSMEGESQPVKMFD 144 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEE---EEEEECSSCEEEEEECSSSEEEEEE---SSEEEEEESSTTCCCEEEEE
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhh---hcceecCCccEEEEecCCCeEEEEc---CCcEEEEcccCCCCCceeee
Confidence 44678888777765 67899999988765 4444456677777887655444443 578999998753322 22
Q ss_pred cccC----------------ceEEEec------CCCcEEEEEccCCCcceeeecCCCcceEEEEEccC---CCEEEEeec
Q psy8758 84 VHKD----------------MTSAAAN------EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT---GREFVAGGY 138 (198)
Q Consensus 84 ~~~~----------------~~~~~~~------~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~---~~~l~~~~~ 138 (198)
.|.. ..++.|- -.|.+.+|..+. +.-+.+++|......+.+.-+ ...++.+..
T Consensus 145 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r 222 (365)
T 2xzh_A 145 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVR 222 (365)
T ss_dssp CCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT--TEEEEECCSEEEEEEECCTTCSSCEEEEEEEEE
T ss_pred cchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc--cccceeeeeeeeeEEEecCCCCCCceEEEEEEe
Confidence 2211 1222221 236678898884 566677777654433333211 113443332
Q ss_pred ---CCcEEEEEcCCC---ce------eeEEec--cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 139 ---DKSLRLYLAHQG---HS------RDIYHT--KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 139 ---d~~v~v~d~~~~---~~------~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
.+.+++-++... .. ...+.. ......-++..|+.-..+..-+.-|.+++||++||.++
T Consensus 223 ~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 223 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp ETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred cCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEE
Confidence 257888888432 11 111111 12345567888887777777888999999999999876
No 311
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.34 E-value=0.021 Score=40.96 Aligned_cols=155 Identities=10% Similarity=0.060 Sum_probs=80.3
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee-----eecCceeeEEeCCC---CCeEEEEe--cCCccEEE
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV-----VMSLRSNMVSWNPM---EAFVFTAA--NEDFNLYS 72 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~---~~~~~~~~--~~d~~i~~ 72 (198)
.-..++|.|+|+++++--..|.|++++..+++. ..+... ........++++|+ +..++++- ..+..|.-
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~-~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK-TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcE-eeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 457899999999777665589999888655542 222211 12345688999995 44554431 12333433
Q ss_pred EeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeec-CCCcceEEEEEccCCCEEEEeec-------------
Q psy8758 73 YDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSPTGREFVAGGY------------- 138 (198)
Q Consensus 73 ~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~------------- 138 (198)
+........... ....-.++ ..+. ........|+|.|||.+.++.+.
T Consensus 112 ~~~~~~~~~~~~----------~~~~~~i~---------~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~ 172 (347)
T 3das_A 112 MLYDEKKPSGEQ----------LGAPDTVF---------RGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSL 172 (347)
T ss_dssp EEBCTTSCTTCC----------BCCCEEEE---------EEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCS
T ss_pred EEeCCCCccccc----------CCCcEEEE---------EcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCC
Confidence 433221000000 00000011 1111 11123467999999987776542
Q ss_pred CCcEEEEEcCCCc-------eeeEEeccCcccEEEEEEcCCCCEEEE
Q psy8758 139 DKSLRLYLAHQGH-------SRDIYHTKRMQHVTHTVWSLDNKFVIS 178 (198)
Q Consensus 139 d~~v~v~d~~~~~-------~~~~~~~~~~~~v~~~~~s~~~~~l~~ 178 (198)
.|.|.-++....- ....+..+|. ....++|+|+|+++++
T Consensus 173 ~G~IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~ 218 (347)
T 3das_A 173 GGKILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFAS 218 (347)
T ss_dssp TTCEEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEE
T ss_pred CCEEEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEE
Confidence 2455555544220 1123334553 4568899999886654
No 312
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.30 E-value=0.021 Score=39.95 Aligned_cols=175 Identities=10% Similarity=0.033 Sum_probs=86.1
Q ss_pred CCceEEEeeCC----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC------ccEEEEeccCCCCc
Q psy8758 12 DNKFVISASDE----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED------FNLYSYDIRQLNSP 81 (198)
Q Consensus 12 ~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d------~~i~~~d~~~~~~~ 81 (198)
+++.++.|+.+ ..+.+||..+.+- ..+........-.+++ .-++ .+++.|+.+ ..+..||..+..-.
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~-~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSW-YSKLGPPTPRDSLAAC-AAEG-KIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEE-EEEECCSSCCBSCEEE-EETT-EEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeE-EECCCCCccccceeEE-EECC-EEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 55666667644 5688888876642 2222111111111111 1234 444445443 45888887654310
Q ss_pred --------c-----ccccCceEEEecC---------CCcEEEEEccCCCccee--eecCCCcceEEEEEccCCCEEEEee
Q psy8758 82 --------L-----NVHKDMTSAAANE---------DFNLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTGREFVAGG 137 (198)
Q Consensus 82 --------~-----~~~~~~~~~~~~~---------~~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~~~l~~~~ 137 (198)
. ....+.+++.|+. ...+..||+.+ ..-.. .+.........+.+ +++.++.|+
T Consensus 132 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG 208 (306)
T 3ii7_A 132 TKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPAT-ETWTELCPMIEARKNHGLVFV--KDKIFAVGG 208 (306)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTT-TEEEEECCCSSCCBSCEEEEE--TTEEEEECC
T ss_pred eCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCC-CeEEECCCccchhhcceEEEE--CCEEEEEeC
Confidence 0 1112334555543 34578888876 22111 11111111122222 567777776
Q ss_pred cC-----CcEEEEEcCCCceeeEEeccC-cccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758 138 YD-----KSLRLYLAHQGHSRDIYHTKR-MQHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE 194 (198)
Q Consensus 138 ~d-----~~v~v~d~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~ 194 (198)
.+ ..+.+||+.+.+....-.... ......+.+ ++++++.|+.+ +.+.+||+.+.+
T Consensus 209 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 209 QNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred CCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 53 468999998876543321111 111222222 66777777643 568899987643
No 313
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.26 E-value=0.043 Score=42.75 Aligned_cols=190 Identities=6% Similarity=-0.029 Sum_probs=108.1
Q ss_pred cceeEEEECCCCceEEEee-CCCeEEEEEccCCceeeeeeee----eecCceeeEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758 2 QHVTHTVWSLDNKFVISAS-DEMNLRVWKAHASEKLGPIRKV----VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIR 76 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~-~d~~i~i~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~ 76 (198)
+.+.+++|.+....|+.+. ..+.|+.++++.......+... .....+..+++.+.+..|+.+.+..+.|.+.++.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 3467889988666555554 4577888877543322222210 0123567899999888888776667788888775
Q ss_pred CCCCc-c-c------------cccCceEEEecCCC--cEEEEEccCCCcceeee-cCCCcceEEEEEccCCCEEEEee-c
Q psy8758 77 QLNSP-L-N------------VHKDMTSAAANEDF--NLYSYDIRQLNSPLNVH-KDMTSAVTSVDYSPTGREFVAGG-Y 138 (198)
Q Consensus 77 ~~~~~-~-~------------~~~~~~~~~~~~~~--~i~~~d~~~~~~~~~~~-~~~~~~i~~~~~sp~~~~l~~~~-~ 138 (198)
..... + . +..+.++.+-.... .|...++. +.....+ ...-...+.++++++++.|..+. .
T Consensus 420 G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~d--G~~~~~l~~~~l~~P~gla~D~~~~~LYw~D~~ 497 (628)
T 4a0p_A 420 GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALD--GTEREVLFFSGLSKPIALALDSRLGKLFWADSD 497 (628)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETT--SCSCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCC--CCCcEEEEeccCCCccEEEEeCCCCEEEEEeCC
Confidence 33211 1 0 11122222222121 34444443 2322222 22334578999999877776654 4
Q ss_pred CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCcc
Q psy8758 139 DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEK 195 (198)
Q Consensus 139 d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~ 195 (198)
.+.|..+++.... ...+.........+++... +..+.+=...+.|...|..+|+.
T Consensus 498 ~~~I~~~~~dG~~-r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~ 552 (628)
T 4a0p_A 498 LRRIESSDLSGAN-RIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREG 552 (628)
T ss_dssp TTEEEEEETTSCS-CEEEECSSCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSSC
T ss_pred CCEEEEEeCCCCc-eEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCC
Confidence 6789999986543 3333223334567777755 44455555667888888877664
No 314
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.22 E-value=0.014 Score=38.93 Aligned_cols=145 Identities=4% Similarity=-0.072 Sum_probs=77.6
Q ss_pred CCceEEEeeCCCeEEEEEccCCce--e-eeeeeeee--cCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC-ccccc
Q psy8758 12 DNKFVISASDEMNLRVWKAHASEK--L-GPIRKVVM--SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS-PLNVH 85 (198)
Q Consensus 12 ~~~~l~~~~~d~~i~i~~~~~~~~--~-~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~-~~~~~ 85 (198)
....|+...+| +++.=....+.. . ........ =..+..++|+|++...++ .++.++-.+..+... .+.
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV---~~G~Ly~~~~~t~~~~~W~-- 76 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV---LNDKIYKGTPPTHDNDNWM-- 76 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE---ETTEEEEESCCCSTTCCHH--
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE---eCCeEEEECCCCCCccccc--
Confidence 34567777777 665544443331 0 11122111 135779999998875543 456665555432100 000
Q ss_pred cCceEEEecCCCcEEEEEccCCCcceeeec-CCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCcee------eEEec
Q psy8758 86 KDMTSAAANEDFNLYSYDIRQLNSPLNVHK-DMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSR------DIYHT 158 (198)
Q Consensus 86 ~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~------~~~~~ 158 (198)
.....+- ..-..-.++.|.|+|.+.++ .||.|+-++-.+...- ..+-.
T Consensus 77 -----------------------~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~ 131 (236)
T 1tl2_A 77 -----------------------GRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGS 131 (236)
T ss_dssp -----------------------HHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEEC
T ss_pred -----------------------ccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEecc
Confidence 0011110 00111467899999998877 5698887776442111 11111
Q ss_pred cCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758 159 KRMQHVTHTVWSLDNKFVISASDEMNLRVWK 189 (198)
Q Consensus 159 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~ 189 (198)
.-=..+..+.|.|+|.+.+.. |+.++-+.
T Consensus 132 ~gw~~~~~lff~p~G~Lyav~--dg~lyr~~ 160 (236)
T 1tl2_A 132 GGWSGFKFLFFHPNGYLYAVH--GQQFYKAL 160 (236)
T ss_dssp SSGGGEEEEEECTTSCEEEEE--TTEEEEEC
T ss_pred CCCCceEEEEECCCceEEEEe--CCcEEecC
Confidence 111467899999999987766 77764433
No 315
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.12 E-value=0.046 Score=40.46 Aligned_cols=181 Identities=9% Similarity=0.133 Sum_probs=111.8
Q ss_pred EEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc---cc
Q psy8758 7 TVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP---LN 83 (198)
Q Consensus 7 ~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~---~~ 83 (198)
.-.+|..+.+|.-. ..++++||+++... ++.+.....|.--.|-.+.. |..+ .+..|+-|++.....+ +.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~k---lks~~~~e~VvfWkWis~~~-l~lV--T~taVyHWsi~~~s~P~kvFd 143 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSK---MKAHTMTDDVTFWKWISLNT-VALV--TDNAVYHWSMEGESQPVKMFD 143 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEE---EEEEECSSCCCEEEEEETTE-EEEE--CSSEEEEEESSSSCCCEEEEE
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhh---hcceecCCCceEEEecCCCe-EEEE--cCCeeEEecccCCCCchhhee
Confidence 44678888777765 67999999988765 44444456677777765544 4443 3678999998653322 22
Q ss_pred cccC----------------ceEEEec------CCCcEEEEEccCCCcceeeecCCCcceEEEEEccCC---CEEEEeec
Q psy8758 84 VHKD----------------MTSAAAN------EDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTG---REFVAGGY 138 (198)
Q Consensus 84 ~~~~----------------~~~~~~~------~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~---~~l~~~~~ 138 (198)
.|.. ..++.|- -.|.+.+|..+. +.-+.+++|......+.+.-+. ..++.+..
T Consensus 144 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r 221 (494)
T 1bpo_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVR 221 (494)
T ss_dssp CCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT--CCEEEECCSEEEEEEEECTTCSSEEEEEEEEEC
T ss_pred cchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc--cccchheeeeeeeEEEecCCCCCCceEEEEEEe
Confidence 2211 1222221 236678898885 5667778886655444443221 23444433
Q ss_pred ---CCcEEEEEcCCC---ce------eeEEec--cCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 139 ---DKSLRLYLAHQG---HS------RDIYHT--KRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 139 ---d~~v~v~d~~~~---~~------~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
.+.++|-++... .. ...+.. .......++..|+.-..+..-+.-|.+++||+.|+.++
T Consensus 222 ~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 222 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (494)
T ss_dssp STTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred cCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceee
Confidence 268888888542 11 111111 12345667888887777877888999999999999876
No 316
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.11 E-value=0.037 Score=39.25 Aligned_cols=178 Identities=9% Similarity=0.033 Sum_probs=90.1
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEcc-CCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEE-Eecc-CCC
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAH-ASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYS-YDIR-QLN 79 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~-~d~~-~~~ 79 (198)
.+..+.+.++++.++.+ .++.| |... .++.-..+.. .....+..+.+.|++..+++ + .++.++. .|-. ..-
T Consensus 123 ~~~~i~~~~~~~~~~~~-~~g~v--~~S~DgG~tW~~~~~-~~~~~~~~~~~~~~~~~~~~-g-~~G~~~~S~d~gG~tW 196 (327)
T 2xbg_A 123 SPRLIKALGNGSAEMIT-NVGAI--YRTKDSGKNWQALVQ-EAIGVMRNLNRSPSGEYVAV-S-SRGSFYSTWEPGQTAW 196 (327)
T ss_dssp CEEEEEEEETTEEEEEE-TTCCE--EEESSTTSSEEEEEC-SCCCCEEEEEECTTSCEEEE-E-TTSSEEEEECTTCSSC
T ss_pred CeEEEEEECCCCEEEEe-CCccE--EEEcCCCCCCEEeec-CCCcceEEEEEcCCCcEEEE-E-CCCcEEEEeCCCCCce
Confidence 35667777677766655 45543 3332 3433333322 22346788999998776654 4 4444443 3321 100
Q ss_pred Ccc-----------ccccCceEEEecCCCcEEEEEccCCCcceeeec----CCCcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758 80 SPL-----------NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHK----DMTSAVTSVDYSPTGREFVAGGYDKSLRL 144 (198)
Q Consensus 80 ~~~-----------~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~----~~~~~i~~~~~sp~~~~l~~~~~d~~v~v 144 (198)
..+ ....+..+...+.+|.++..+... ++.-..+. .....+..+++.|+++.++++. ++.+ +
T Consensus 197 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~-G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~ 273 (327)
T 2xbg_A 197 EPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDN-SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-L 273 (327)
T ss_dssp EEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTE-EEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-E
T ss_pred eECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCC-CCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-E
Confidence 000 011122233444566665553111 11111111 1223578899998887776654 5656 4
Q ss_pred EEcCCCceeeEEec--cCcccEEEEEEcCCCCEEEEecCCCeEEEEec
Q psy8758 145 YLAHQGHSRDIYHT--KRMQHVTHTVWSLDNKFVISASDEMNLRVWKA 190 (198)
Q Consensus 145 ~d~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~ 190 (198)
+..+.++.-..... .....+..+.|.++++ ++.++.+|.|.-++-
T Consensus 274 ~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 274 CSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp EESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECC
T ss_pred EeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcC
Confidence 45555544333321 1235678888876665 445567898877654
No 317
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.06 E-value=0.045 Score=39.37 Aligned_cols=62 Identities=16% Similarity=0.123 Sum_probs=41.1
Q ss_pred cceEEEEEc-------cCCCEEEEeecCCcEEEEEcCCC-cee--eEEeccCcccEEEEEEcCCCCEEEEec
Q psy8758 119 SAVTSVDYS-------PTGREFVAGGYDKSLRLYLAHQG-HSR--DIYHTKRMQHVTHTVWSLDNKFVISAS 180 (198)
Q Consensus 119 ~~i~~~~~s-------p~~~~l~~~~~d~~v~v~d~~~~-~~~--~~~~~~~~~~v~~~~~s~~~~~l~~~~ 180 (198)
.....++|. .+|+++++.-..+.|...++... +.. ..+..+....+..+++.|||.++++..
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 346778883 56777777666778888888753 222 223222245789999999998766553
No 318
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.96 E-value=0.034 Score=40.06 Aligned_cols=115 Identities=17% Similarity=0.184 Sum_probs=66.7
Q ss_pred ceeEEEECCCCceEEEee---CC------------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC
Q psy8758 3 HVTHTVWSLDNKFVISAS---DE------------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED 67 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~---~d------------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 67 (198)
..+++.+.++|++.++.. .| ..-++|.+..++ ...+.. .-...+.++|+||++.++++-+..
T Consensus 166 ~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~-~~~~~~--~l~~pNGia~spDg~~lYvadt~~ 242 (355)
T 3sre_A 166 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND-VRVVAE--GFDFANGINISPDGKYVYIAELLA 242 (355)
T ss_dssp SEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC-CEEEEE--EESSEEEEEECTTSSEEEEEEGGG
T ss_pred CCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCe-EEEeec--CCcccCcceECCCCCEEEEEeCCC
Confidence 467888889998776643 11 123444443333 222221 123458999999999998877677
Q ss_pred ccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEcc-CCCEEEEeecC-CcEEEE
Q psy8758 68 FNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSP-TGREFVAGGYD-KSLRLY 145 (198)
Q Consensus 68 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp-~~~~l~~~~~d-~~v~v~ 145 (198)
+.|+.|++... +.+ ...+.+ ........+++.+ +|++.+++..+ +.|..|
T Consensus 243 ~~I~~~~~~~~------------------g~l---------~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~ 294 (355)
T 3sre_A 243 HKIHVYEKHAN------------------WTL---------TPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFY 294 (355)
T ss_dssp TEEEEEEECTT------------------SCE---------EEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSC
T ss_pred CeEEEEEECCC------------------CcE---------ecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEE
Confidence 88888887532 111 001112 1134567788988 58877766533 344444
Q ss_pred EcC
Q psy8758 146 LAH 148 (198)
Q Consensus 146 d~~ 148 (198)
+..
T Consensus 295 ~P~ 297 (355)
T 3sre_A 295 DAE 297 (355)
T ss_dssp CTT
T ss_pred CCC
Confidence 443
No 319
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.95 E-value=0.059 Score=38.72 Aligned_cols=58 Identities=10% Similarity=0.125 Sum_probs=36.9
Q ss_pred ceEEEEEccCCCEEEEeecCCcEEEEEcCCCce------eeEEeccCcccEEEEEEcCCCCEEEEe
Q psy8758 120 AVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS------RDIYHTKRMQHVTHTVWSLDNKFVISA 179 (198)
Q Consensus 120 ~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~------~~~~~~~~~~~v~~~~~s~~~~~l~~~ 179 (198)
....++| .+|..+++.-..+.|...++..... ...+. .....+..+++.|||.++++.
T Consensus 269 ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~-~~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 269 PPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL-SGFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp CEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE-ESSCCEEEEEECTTSCEEEEE
T ss_pred CCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec-ccCCCeeEEEECCCCcEEEEE
Confidence 3456777 4676666666667788887764331 11221 223578999999999876654
No 320
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.88 E-value=0.06 Score=37.78 Aligned_cols=101 Identities=11% Similarity=0.074 Sum_probs=52.2
Q ss_pred ceEEEecC-C-----CcEEEEEccCCCcce--eeecCCCcceEEEEEccCCCEEEEeecCC-----cEEEEEcCCCceee
Q psy8758 88 MTSAAANE-D-----FNLYSYDIRQLNSPL--NVHKDMTSAVTSVDYSPTGREFVAGGYDK-----SLRLYLAHQGHSRD 154 (198)
Q Consensus 88 ~~~~~~~~-~-----~~i~~~d~~~~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~d~-----~v~v~d~~~~~~~~ 154 (198)
.+++.|+. + ..+..||+.+ ..-. ..+.........+.+ +++.++.|+.++ .+.+||+.+.+...
T Consensus 150 ~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 150 LVYVIGGKGSDRKCLNKMCVYDPKK-FEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAP 226 (315)
T ss_dssp EEEEECCBCTTSCBCCCEEEEETTT-TEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred EEEEEeCCCCCCcccceEEEEeCCC-CeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence 45666654 2 4588888875 2211 111111111222222 667778887654 58899998876544
Q ss_pred EEeccCc-ccEEEEEEcCCCCEEEEecCC--------------CeEEEEecCCC
Q psy8758 155 IYHTKRM-QHVTHTVWSLDNKFVISASDE--------------MNLRVWKAHAS 193 (198)
Q Consensus 155 ~~~~~~~-~~v~~~~~s~~~~~l~~~~~d--------------g~v~~w~~~~~ 193 (198)
.-..... .....+. -++++++.|+.+ +.+.+||+++.
T Consensus 227 ~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 278 (315)
T 4asc_A 227 FEAFPQERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEK 278 (315)
T ss_dssp ECCCSSCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTT
T ss_pred CCCCCCcccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEecCCCC
Confidence 3211111 1111222 256766666643 24778888765
No 321
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.80 E-value=0.069 Score=37.37 Aligned_cols=174 Identities=12% Similarity=0.137 Sum_probs=84.3
Q ss_pred CCceEEEeeC----C-----CeEEEEEccCCceeeeeeeeeec-CceeeEEeCCCCCeEEEEecCC-----ccEEEEecc
Q psy8758 12 DNKFVISASD----E-----MNLRVWKAHASEKLGPIRKVVMS-LRSNMVSWNPMEAFVFTAANED-----FNLYSYDIR 76 (198)
Q Consensus 12 ~~~~l~~~~~----d-----~~i~i~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~ 76 (198)
+++.++.|+. + ..+.+||+.+.+- ..+...... ..-..+.+ ++ .+++.|+.+ ..+..||..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW-SPCAPMSVPRNRIGVGVI--DG-HIYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEE-EECCCCSSCCBTCEEEEE--TT-EEEEECCEETTEECCCEEEEETT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeE-eECCCCCcCccccEEEEE--CC-EEEEEcCCCCCcccccEEEECCC
Confidence 4566666654 2 3577888876542 222111111 11112222 34 444444332 357888876
Q ss_pred CCCC----cc---------ccccCceEEEecCC-----CcEEEEEccCCCcce--eeecCCCcceEEEEEccCCCEEEEe
Q psy8758 77 QLNS----PL---------NVHKDMTSAAANED-----FNLYSYDIRQLNSPL--NVHKDMTSAVTSVDYSPTGREFVAG 136 (198)
Q Consensus 77 ~~~~----~~---------~~~~~~~~~~~~~~-----~~i~~~d~~~~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~ 136 (198)
+..- .+ ....+.+++.|+.+ ..+..||+.+ .+-. ..+.........+.+ +++.++.|
T Consensus 146 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~iyv~G 222 (308)
T 1zgk_A 146 RDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPER-NEWRMITAMNTIRSGAGVCVL--HNCIYAAG 222 (308)
T ss_dssp TTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTT-TEEEECCCCSSCCBSCEEEEE--TTEEEEEC
T ss_pred CCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCC-CeEeeCCCCCCccccceEEEE--CCEEEEEe
Confidence 4321 00 11123455555543 4578888875 2211 111111111222233 67777888
Q ss_pred ecC-----CcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758 137 GYD-----KSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE 194 (198)
Q Consensus 137 ~~d-----~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~ 194 (198)
+.+ ..+.+||+.+.+.......... .....+. -++++++.|+.+ ..+.+||+.+.+
T Consensus 223 G~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 223 GYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 764 5699999988765433211110 1111222 266777777643 468889987653
No 322
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.76 E-value=0.2 Score=42.04 Aligned_cols=144 Identities=13% Similarity=0.128 Sum_probs=86.6
Q ss_pred CceEEEee----------CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCcc
Q psy8758 13 NKFVISAS----------DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPL 82 (198)
Q Consensus 13 ~~~l~~~~----------~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~ 82 (198)
..++++|+ ..|.|.+|++..+ .++.+......+++.+++-- +| +++++ -...+++|++...
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~-kL~lv~~~~v~g~v~al~~~-~g-~Lla~--ig~~l~vy~l~~~---- 914 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG-KLQTVAEKEVKGAVYSMVEF-NG-KLLAS--INSTVRLYEWTTE---- 914 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEEEEEEETT-EEEEEEEEEESSCEEEEEEE-TT-EEEEE--ETTEEEEEEECTT----
T ss_pred CEEEEEEeeecCCCCCCCCceEEEEEEEECC-EEEEEEEEEcCCcCEEEeee-CC-EEEEE--cCCEEEEEECCCC----
Confidence 35787775 3478999998743 45555555567778877633 24 45443 3467888887642
Q ss_pred ccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEE--cCCCceeeEEeccC
Q psy8758 83 NVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYL--AHQGHSRDIYHTKR 160 (198)
Q Consensus 83 ~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d--~~~~~~~~~~~~~~ 160 (198)
+.+..-..+-..+..+.....+.+++.|..-..+.++. ...++.........
T Consensus 915 --------------------------~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~ 968 (1158)
T 3ei3_A 915 --------------------------KELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFN 968 (1158)
T ss_dssp --------------------------SCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEECCS
T ss_pred --------------------------ceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecc
Confidence 11110000011122233333577888888766666654 44455544444455
Q ss_pred cccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758 161 MQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 192 (198)
Q Consensus 161 ~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~ 192 (198)
...++++.+-.++ .++.+..+|.+.+...+.
T Consensus 969 ~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 969 PNWMSAVEILDDD-NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp CBCEEEEEEEETT-EEEEEETTSEEEEEEECT
T ss_pred cccEEEEEEEccC-cEEEEcCCCcEEEEecCC
Confidence 6788888887654 666788899999987754
No 323
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.74 E-value=0.074 Score=36.95 Aligned_cols=175 Identities=13% Similarity=0.168 Sum_probs=86.5
Q ss_pred CCceEEEee-CC-----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC-----ccEEEEeccCCC-
Q psy8758 12 DNKFVISAS-DE-----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED-----FNLYSYDIRQLN- 79 (198)
Q Consensus 12 ~~~~l~~~~-~d-----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~- 79 (198)
++..++.|+ .+ ..+.+||+.+.+- ..+...... .........++ .+++.|+.+ ..+..||..+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~-r~~~~~~~~~~-~l~v~GG~~~~~~~~~~~~~d~~~~~~ 90 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEW-SFLPSITRK-RRYVASVSLHD-RIYVIGGYDGRSRLSSVECLDYTADED 90 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEE-EECCCCSSC-CBSCEEEEETT-EEEEECCBCSSCBCCCEEEEETTCCTT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeE-EeCCCCChh-hccccEEEECC-EEEEEcCCCCCccCceEEEEECCCCCC
Confidence 455666666 33 3678889876642 222211111 11111122233 444545433 458889987654
Q ss_pred --Cccc-------------cccCceEEEecCC-----CcEEEEEccCCCcc--eeeecCCCcceEEEEEccCCCEEEEee
Q psy8758 80 --SPLN-------------VHKDMTSAAANED-----FNLYSYDIRQLNSP--LNVHKDMTSAVTSVDYSPTGREFVAGG 137 (198)
Q Consensus 80 --~~~~-------------~~~~~~~~~~~~~-----~~i~~~d~~~~~~~--~~~~~~~~~~i~~~~~sp~~~~l~~~~ 137 (198)
-... ...+.+++.|+.+ ..+..||+.+ .+- +............+.+ +++.++.|+
T Consensus 91 ~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~-~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG 167 (301)
T 2vpj_A 91 GVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNI-DQWSMLGDMQTAREGAGLVVA--SGVIYCLGG 167 (301)
T ss_dssp CCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTT-TEEEEEEECSSCCBSCEEEEE--TTEEEEECC
T ss_pred CeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCC-CeEEECCCCCCCcccceEEEE--CCEEEEECC
Confidence 1100 1123345555533 3577888775 222 1112111111222222 677777877
Q ss_pred cC-----CcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758 138 YD-----KSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE 194 (198)
Q Consensus 138 ~d-----~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~ 194 (198)
.+ ..+.+||+.+.+....-..... .....+. -++++++.|+.+ +.+.+||+.+.+
T Consensus 168 ~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 168 YDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp BCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 54 4689999988765443211111 1111222 256777777653 468899987653
No 324
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.47 E-value=0.14 Score=36.58 Aligned_cols=190 Identities=9% Similarity=0.010 Sum_probs=109.8
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeee-eeee--ecCceeeEEeCCCCCeEEEEec------CCccEEE
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPI-RKVV--MSLRSNMVSWNPMEAFVFTAAN------EDFNLYS 72 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~-~~~~--~~~~v~~~~~~~~~~~~~~~~~------~d~~i~~ 72 (198)
++|.--.|-.+.. |+..+ +..|+-|++.....+..+ ..+. ....|..-..+++.++++.+|- -.|.+.+
T Consensus 107 e~VvfWkWis~~~-L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQL 184 (365)
T 2xzh_A 107 DDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL 184 (365)
T ss_dssp SCEEEEEECSSSE-EEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEE
T ss_pred CccEEEEecCCCe-EEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEE
Confidence 3455555654433 44333 347999999754333333 2221 2345666677889999888762 2367888
Q ss_pred EeccCCC-CccccccC--------------ceEEEec---CCCcEEEEEccCC--Ccce------eeecC---CCcceEE
Q psy8758 73 YDIRQLN-SPLNVHKD--------------MTSAAAN---EDFNLYSYDIRQL--NSPL------NVHKD---MTSAVTS 123 (198)
Q Consensus 73 ~d~~~~~-~~~~~~~~--------------~~~~~~~---~~~~i~~~d~~~~--~~~~------~~~~~---~~~~i~~ 123 (198)
|..++.. +.+++|.. .+++.+. ..+++++.++..+ +.+. ..+.. ..+-.-+
T Consensus 185 YS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVa 264 (365)
T 2xzh_A 185 YSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVA 264 (365)
T ss_dssp EETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEE
T ss_pred EeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEE
Confidence 9887654 33333322 1222222 2268999998543 1111 11111 1233557
Q ss_pred EEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 124 VDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 124 ~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
|..|+.-..+..-..-|.+++||+.++.++..-+.. ...|..-+-+.+..=++.....|.|.--.++...
T Consensus 265 mqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS-~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 265 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS-GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTT
T ss_pred EEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccC-CCceEEecccCCCCcEEEEcCCCEEEEEEECccc
Confidence 778887778888888999999999999998775332 2455544444443334444567777666555443
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.46 E-value=0.12 Score=35.96 Aligned_cols=173 Identities=12% Similarity=0.109 Sum_probs=84.0
Q ss_pred CceEEEeeC--CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC----ccEEEEeccCCCC------
Q psy8758 13 NKFVISASD--EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED----FNLYSYDIRQLNS------ 80 (198)
Q Consensus 13 ~~~l~~~~~--d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d----~~i~~~d~~~~~~------ 80 (198)
+..++.|+. ...+.+||..+.+-. .+........-.++.. -+ ..+++.|+.+ ..+..||..+..-
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~-~~-~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWT-DIRCPFEKRRDAACVF-WD-NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEE-ECCCCSCCCBSCEEEE-ET-TEEEEECCBSSSBCCEEEEEETTTTEEEEEECC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEe-cCCCCCcccceeEEEE-EC-CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC
Confidence 345556654 357888998776422 2221111110111211 23 3455555443 5678888765431
Q ss_pred --c-----cccccCceEEEecCC------CcEEEEEccCCCccee--eecCCCcceEEEEEccCCCEEEEeec-------
Q psy8758 81 --P-----LNVHKDMTSAAANED------FNLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTGREFVAGGY------- 138 (198)
Q Consensus 81 --~-----~~~~~~~~~~~~~~~------~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~~~l~~~~~------- 138 (198)
. .....+.+++.|+.+ ..+..||+.+ ..-.. .+.........+. -+++.++.|+.
T Consensus 89 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~-~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~ 165 (306)
T 3ii7_A 89 PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRT-ESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSG 165 (306)
T ss_dssp SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTT-TEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTC
T ss_pred CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCC-CceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCcc
Confidence 0 111233456666544 4588888876 22211 1111111112222 25677777764
Q ss_pred --CCcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCC
Q psy8758 139 --DKSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDE-----MNLRVWKAHAS 193 (198)
Q Consensus 139 --d~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~ 193 (198)
-..+.+||+.+.+....-..... ..-..+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 166 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 166 RVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTT
T ss_pred cccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCC
Confidence 34588999988765443211111 11111222 66676666543 45888988764
No 326
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.39 E-value=0.29 Score=41.90 Aligned_cols=180 Identities=8% Similarity=0.147 Sum_probs=104.8
Q ss_pred EECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc---ccc
Q psy8758 8 VWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP---LNV 84 (198)
Q Consensus 8 ~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~---~~~ 84 (198)
-.+|..+.+|.-. ..+++|||+++...+ +.+....+|.--.|-.+...-++ .+..|+.|++.....+ +..
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~kl---ks~~~~e~VvfWkWis~~~l~lV---T~~aVyHW~~~~~s~P~k~fdR 144 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKM---KAHTMTDDVTFWKWISLNTVALV---TDNAVYHWSMEGESQPVKMFDR 144 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhhh---cccccCCCceEEEecCCCeeEEE---cCCeEEEeccCCCCccHHHHhc
Confidence 3567777776654 678999999877644 44444566777777655444443 3578999999643222 222
Q ss_pred cc----------------CceEEEe------cCCCcEEEEEccCCCcceeeecCCCcceEEEEEc--cC-CCEEEEeec-
Q psy8758 85 HK----------------DMTSAAA------NEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYS--PT-GREFVAGGY- 138 (198)
Q Consensus 85 ~~----------------~~~~~~~------~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~s--p~-~~~l~~~~~- 138 (198)
|. ...+++| .-.|.+.+|..+. +.-+.+++|......+... +. ...++.+..
T Consensus 145 ~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er--~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~ 222 (1630)
T 1xi4_A 145 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRG 222 (1630)
T ss_pred chhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc--ccchhhhHhHhhhheeccCCCCCCceEEEEEEec
Confidence 21 1222222 2347788888875 4445556665544333332 11 223332222
Q ss_pred --CCcEEEEEcCCC---cee------eEEecc--CcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 139 --DKSLRLYLAHQG---HSR------DIYHTK--RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 139 --d~~v~v~d~~~~---~~~------~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
.+.++|-++... ... ..+.++ ......++..|+.-..+..-+.-|.++++|+.||.++
T Consensus 223 ~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 223 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred CCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhh
Confidence 267888887542 111 111111 1234556777877777777788999999999999876
No 327
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.36 E-value=0.23 Score=38.08 Aligned_cols=87 Identities=8% Similarity=0.023 Sum_probs=55.9
Q ss_pred cCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEE
Q psy8758 45 SLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSV 124 (198)
Q Consensus 45 ~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~ 124 (198)
......+..+|||++++++|..+.++.++|.+.....+... +.+.+ .......+ ......-.
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k---------------~~~~~--~~~~ae~e-~GlGPlHt 383 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGK---------------LADPR--DVIVGEPE-LGLGPLHT 383 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTC---------------CSCGG--GGEEECCB-CCSCEEEE
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcc---------------ccCcc--cceEeecc-CCCcccEE
Confidence 34456789999999999998889999999987532211100 00111 01112222 23345668
Q ss_pred EEccCCCEEEEeecCCcEEEEEcCC
Q psy8758 125 DYSPTGREFVAGGYDKSLRLYLAHQ 149 (198)
Q Consensus 125 ~~sp~~~~l~~~~~d~~v~v~d~~~ 149 (198)
+|.++|.-..+--.|..|.-|++..
T Consensus 384 ~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 384 TFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EECSSSEEEEEETTTTEEEEEEHHH
T ss_pred EECCCCceEeeeeecceEEEEeccH
Confidence 8999995555556799999999975
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.33 E-value=0.15 Score=35.61 Aligned_cols=175 Identities=10% Similarity=0.067 Sum_probs=84.5
Q ss_pred CCceEEEeeC----CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecC----C-----ccEEEEeccCC
Q psy8758 12 DNKFVISASD----EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANE----D-----FNLYSYDIRQL 78 (198)
Q Consensus 12 ~~~~l~~~~~----d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~----d-----~~i~~~d~~~~ 78 (198)
++..++.|+. -..+.+||..+.+- ..+........-.+++. .+ ..+++.|+. + ..+..||..+.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~-~~-~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTW-LRLADLQVPRSGLAGCV-VG-GLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEE-EECCCCSSCCBSCEEEE-ET-TEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeE-eECCCCCcccccceEEE-EC-CEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 5566666663 23688889876642 22221111111112222 13 444444543 2 35788887643
Q ss_pred CC----cc---------ccccCceEEEecCC-----CcEEEEEccCCCccee--eecCCCcceEEEEEccCCCEEEEeec
Q psy8758 79 NS----PL---------NVHKDMTSAAANED-----FNLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTGREFVAGGY 138 (198)
Q Consensus 79 ~~----~~---------~~~~~~~~~~~~~~-----~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~~~l~~~~~ 138 (198)
.- .+ ....+.+++.|+.+ ..+..||+.+ .+-.. .+.........+.+ +++.++.|+.
T Consensus 101 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 177 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPER-DEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGF 177 (308)
T ss_dssp EEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTT-TEEEECCCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred eEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCC-CeEeECCCCCccccceEEEEE--CCEEEEEeCC
Confidence 21 00 11123445555533 3577888775 22111 11111111222223 5677777776
Q ss_pred C-----CcEEEEEcCCCceeeEEeccC-cccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758 139 D-----KSLRLYLAHQGHSRDIYHTKR-MQHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE 194 (198)
Q Consensus 139 d-----~~v~v~d~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~ 194 (198)
+ ..+.+||+.+.+....-.... ......+.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 4 468999998765543221111 111122222 66777777654 568899987643
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.31 E-value=0.16 Score=35.66 Aligned_cols=101 Identities=11% Similarity=0.113 Sum_probs=50.9
Q ss_pred ceEEEecC------CCcEEEEEccCCCccee--eecCCCcceEEEEEccCCCEEEEeecC-----CcEEEEEcCCCceee
Q psy8758 88 MTSAAANE------DFNLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTGREFVAGGYD-----KSLRLYLAHQGHSRD 154 (198)
Q Consensus 88 ~~~~~~~~------~~~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~~~l~~~~~d-----~~v~v~d~~~~~~~~ 154 (198)
.+++.|+. ...+..||+.+ .+-.. ...........+.+ +++.++.|+.+ ..+.+||+.+.+...
T Consensus 160 ~iyv~GG~~~~~~~~~~~~~yd~~~-~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 236 (318)
T 2woz_A 160 MIYCLGGKTDDKKCTNRVFIYNPKK-GDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEV 236 (318)
T ss_dssp EEEEECCEESSSCBCCCEEEEETTT-TEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEE
T ss_pred EEEEEcCCCCCCCccceEEEEcCCC-CEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEE
Confidence 45555543 24588889876 22211 11111111122222 56777777653 357789988776543
Q ss_pred EEeccC-cccEEEEEEcCCCCEEEEecCC--------------CeEEEEecCCC
Q psy8758 155 IYHTKR-MQHVTHTVWSLDNKFVISASDE--------------MNLRVWKAHAS 193 (198)
Q Consensus 155 ~~~~~~-~~~v~~~~~s~~~~~l~~~~~d--------------g~v~~w~~~~~ 193 (198)
.-.... ......+ ..++++++.|+.+ ..+.+||+.+.
T Consensus 237 ~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 237 MTEFPQERSSISLV--SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp CCCCSSCCBSCEEE--EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred CCCCCCcccceEEE--EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 321111 0111112 2356766666543 45888888764
No 330
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.27 E-value=0.013 Score=41.96 Aligned_cols=66 Identities=14% Similarity=0.122 Sum_probs=40.1
Q ss_pred CEEEEe-ecCCcEEEEEcCCCceeeEEeccC---cccEEE---EEE-c----CCCCEEEEecCCCeEEEEecCCCccc
Q psy8758 131 REFVAG-GYDKSLRLYLAHQGHSRDIYHTKR---MQHVTH---TVW-S----LDNKFVISASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 131 ~~l~~~-~~d~~v~v~d~~~~~~~~~~~~~~---~~~v~~---~~~-s----~~~~~l~~~~~dg~v~~w~~~~~~~~ 196 (198)
..++.. ..||.+..++..+|.....+.... ..++.. ... . ..+..+++++.+|.+...|+++|+.+
T Consensus 57 ~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 57 ETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp EEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred cEEEEEECCCCEEEEEECCCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEE
Confidence 334343 579999999988886554432211 112211 000 0 13457788899999999999998875
No 331
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.22 E-value=0.19 Score=35.82 Aligned_cols=55 Identities=11% Similarity=0.090 Sum_probs=27.7
Q ss_pred cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCC------CeEEEEecCCCccc
Q psy8758 141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDE------MNLRVWKAHASEKL 196 (198)
Q Consensus 141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d------g~v~~w~~~~~~~~ 196 (198)
.+.+||+.+.+....-.... ......+...++++++.|+.+ ..|.++++++++.+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~ 346 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQ-GRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVT 346 (357)
T ss_dssp CCEEEECC---CEEEEECSS-CCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCE
T ss_pred eEEEEecCCCceeeCCCCCC-CcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeE
Confidence 57899998766544321111 111112233467777777654 24667788887653
No 332
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.15 E-value=0.19 Score=34.94 Aligned_cols=175 Identities=15% Similarity=0.161 Sum_probs=83.7
Q ss_pred CCceEEEeeCC----CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC-----ccEEEEeccCCCC--
Q psy8758 12 DNKFVISASDE----MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED-----FNLYSYDIRQLNS-- 80 (198)
Q Consensus 12 ~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----~~i~~~d~~~~~~-- 80 (198)
++..++.|+.+ ..+..||+.+.+- ..+........-.+++. - +..+++.|+.+ ..+..||..+..-
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~-~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~ 91 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERW-HQVAELPSRRCRAGMVY-M-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTS 91 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEE-E-TTEEEEESCBCSSSBCCCEEEEETTTTEEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcE-eEcccCCcccccceEEE-E-CCEEEEEeCcCCCccccceEEECCCCCceee
Confidence 34566666643 3578888876542 22221111100111221 1 34455555433 3578888764331
Q ss_pred ------c-----cccccCceEEEecCCC-----cEEEEEccCCCccee--eecCCCcceEEEEEccCCCEEEEeecC---
Q psy8758 81 ------P-----LNVHKDMTSAAANEDF-----NLYSYDIRQLNSPLN--VHKDMTSAVTSVDYSPTGREFVAGGYD--- 139 (198)
Q Consensus 81 ------~-----~~~~~~~~~~~~~~~~-----~i~~~d~~~~~~~~~--~~~~~~~~i~~~~~sp~~~~l~~~~~d--- 139 (198)
. .....+.+++.|+.++ .+..||+.+ .+-.. .+.........+. -+++.++.|+.+
T Consensus 92 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~-~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~ 168 (302)
T 2xn4_A 92 VANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKS-NEWFHVAPMNTRRSSVGVGV--VGGLLYAVGGYDVAS 168 (302)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTT-TEEEEECCCSSCCBSCEEEE--ETTEEEEECCEETTT
T ss_pred CCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCC-CeEeecCCCCCcccCceEEE--ECCEEEEEeCCCCCC
Confidence 0 0111234556665443 467788765 22111 1111111112222 256777777643
Q ss_pred ----CcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758 140 ----KSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE 194 (198)
Q Consensus 140 ----~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~ 194 (198)
..+.+||+.+.+....-..... .....+. -++++++.|+.+ +.+.+||+.+.+
T Consensus 169 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 169 RQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp TEECCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred CccccEEEEEeCCCCcEEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 4588999988765443211111 1111222 256777777654 468899987643
No 333
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.03 E-value=0.23 Score=34.82 Aligned_cols=170 Identities=10% Similarity=0.078 Sum_probs=82.1
Q ss_pred eEEEeeCCCeEEEEEccCCceeeeeeeeee-cCceeeEEeCCCCCeEEEEec-----C-C----ccEEEEeccCCCC---
Q psy8758 15 FVISASDEMNLRVWKAHASEKLGPIRKVVM-SLRSNMVSWNPMEAFVFTAAN-----E-D----FNLYSYDIRQLNS--- 80 (198)
Q Consensus 15 ~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~-----~-d----~~i~~~d~~~~~~--- 80 (198)
+++.|+ ..+..||..+++-.. ..... ..+........++..++..|. . . ..+..||..+..-
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~--~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~ 82 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC--ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM 82 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE--EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC
T ss_pred EEEEcC--CceEEECCCCCeEec--CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC
Confidence 344555 478999998776322 11111 112222233345555555441 1 1 1267788765331
Q ss_pred -cc---------ccccCceEEEecCC--------CcEEEEEccCCCcce--eeecCCCcceEEEEEccCCCEEEEeec-C
Q psy8758 81 -PL---------NVHKDMTSAAANED--------FNLYSYDIRQLNSPL--NVHKDMTSAVTSVDYSPTGREFVAGGY-D 139 (198)
Q Consensus 81 -~~---------~~~~~~~~~~~~~~--------~~i~~~d~~~~~~~~--~~~~~~~~~i~~~~~sp~~~~l~~~~~-d 139 (198)
.+ ....+.+++.|+.+ ..+..||+.+ .+-. ..+....... +++. -+++.++.|+. +
T Consensus 83 ~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~-~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~ 159 (315)
T 4asc_A 83 PPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLS-FKWGESDPLPYVVYGH-TVLS-HMDLVYVIGGKGS 159 (315)
T ss_dssp CCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTT-TEEEECCCCSSCCBSC-EEEE-ETTEEEEECCBCT
T ss_pred CCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCC-CcEeECCCCCCcccce-eEEE-ECCEEEEEeCCCC
Confidence 00 11123455555532 4588888875 2211 1111111111 2222 35677777776 2
Q ss_pred -----CcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCCC-----eEEEEecCCC
Q psy8758 140 -----KSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDEM-----NLRVWKAHAS 193 (198)
Q Consensus 140 -----~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~dg-----~v~~w~~~~~ 193 (198)
..+.+||..+.+....-..... .....+. -++++++.|+.++ .+.+||+.+.
T Consensus 160 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 160 DRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCcccceEEEEeCCCCeEEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCC
Confidence 4689999988754432211110 1111222 2667777776543 5888888764
No 334
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.93 E-value=0.35 Score=36.13 Aligned_cols=109 Identities=11% Similarity=0.227 Sum_probs=56.8
Q ss_pred ceeeEEeCCCCCeEEEEecCC-ccEEEEeccCCCCccccccCceEEEecCCCcEE-EEEccCCCcceeeecCCCcceEEE
Q psy8758 47 RSNMVSWNPMEAFVFTAANED-FNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLY-SYDIRQLNSPLNVHKDMTSAVTSV 124 (198)
Q Consensus 47 ~v~~~~~~~~~~~~~~~~~~d-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~-~~d~~~~~~~~~~~~~~~~~i~~~ 124 (198)
....++|.|+++.+++ ... +.|+.++.... ... +-++.. .. ........+..|
T Consensus 28 ~P~~~a~~pdG~l~V~--e~~gg~I~~~~~~~g-------------------~~~~~~~~~~---~~-~~~~g~~Gllgi 82 (454)
T 1cru_A 28 KPHALLWGPDNQIWLT--ERATGKILRVNPESG-------------------SVKTVFQVPE---IV-NDADGQNGLLGF 82 (454)
T ss_dssp SEEEEEECTTSCEEEE--ETTTCEEEEECTTTC-------------------CEEEEEECTT---CC-CCTTSSCSEEEE
T ss_pred CceEEEEcCCCcEEEE--EcCCCEEEEEECCCC-------------------cEeEEecCCc---cc-cccCCCCceeEE
Confidence 4578999999986654 344 45777664321 111 111110 00 001134567899
Q ss_pred EEccC---CCEEEEee-c------------CCcEEEEEcCCC--ce---eeE---EeccCcccEEEEEEcCCCCEEEEec
Q psy8758 125 DYSPT---GREFVAGG-Y------------DKSLRLYLAHQG--HS---RDI---YHTKRMQHVTHTVWSLDNKFVISAS 180 (198)
Q Consensus 125 ~~sp~---~~~l~~~~-~------------d~~v~v~d~~~~--~~---~~~---~~~~~~~~v~~~~~s~~~~~l~~~~ 180 (198)
+|+|+ +..|..+. . ...|.-++.... .. ... +..........|+|.|||.++++.+
T Consensus 83 a~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 83 AFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp EECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred EECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 99995 44444332 2 235666655432 11 111 1111223578999999999766644
No 335
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.85 E-value=0.37 Score=35.85 Aligned_cols=189 Identities=10% Similarity=0.013 Sum_probs=110.5
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeee-eeee--ecCceeeEEeCCCCCeEEEEec------CCccEEEE
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPI-RKVV--MSLRSNMVSWNPMEAFVFTAAN------EDFNLYSY 73 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~-~~~~--~~~~v~~~~~~~~~~~~~~~~~------~d~~i~~~ 73 (198)
+|.--.|-.+. .|+..+ +..|+-|++.....+..+ ..+. ....|..-..+++.++++.+|- -.|.+.+|
T Consensus 107 ~VvfWkWis~~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLY 184 (494)
T 1bpo_A 107 DVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 184 (494)
T ss_dssp CCCEEEEEETT-EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEE
T ss_pred CceEEEecCCC-eEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEe
Confidence 34444454333 344343 457999999754333332 2221 2345666677899999887762 23678889
Q ss_pred eccCCC-CccccccC--------------ceEEEecC---CCcEEEEEccCC--Ccc-e-----eeec---CCCcceEEE
Q psy8758 74 DIRQLN-SPLNVHKD--------------MTSAAANE---DFNLYSYDIRQL--NSP-L-----NVHK---DMTSAVTSV 124 (198)
Q Consensus 74 d~~~~~-~~~~~~~~--------------~~~~~~~~---~~~i~~~d~~~~--~~~-~-----~~~~---~~~~~i~~~ 124 (198)
..+... +.+++|.. .+++.+.. .+++++.++..+ +.+ . ..+. ...+-.-+|
T Consensus 185 S~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvam 264 (494)
T 1bpo_A 185 SVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAM 264 (494)
T ss_dssp ESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEE
T ss_pred eccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEE
Confidence 887654 33444422 22333322 378999998643 111 1 1111 112335678
Q ss_pred EEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 125 DYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 125 ~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
..|+.-..+..-..-|.+++||+.++.++..-+.. ...|...+-+....=++.....|.|.--.++...
T Consensus 265 qvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs-~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 265 QISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS-GETIFVTAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp EEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC-SSCEEEEEEETTTTEEEEEETTCEEEEEEECTTT
T ss_pred EecccCCEEEEEecCceEEEEecccceeeeeeccc-CCceEEecccCCCCcEEEEccCceEEEEEEcccc
Confidence 88888778888888999999999999998775322 3455554444444444445577777665555443
No 336
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.74 E-value=0.33 Score=34.37 Aligned_cols=178 Identities=8% Similarity=0.061 Sum_probs=87.3
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeee--eecCceeeEEeCCCCCeEEEEecCCccEEEEe-----
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKV--VMSLRSNMVSWNPMEAFVFTAANEDFNLYSYD----- 74 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d----- 74 (198)
..+.++.|.+++..++++ ..|.| +...+.++.-..+... .....+..+.|.| ..+++++ ..+.|+.-.
T Consensus 36 ~~~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~g-~~g~i~~S~DgG~t 110 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWIVG-EPPIMLHTTDGGQS 110 (327)
T ss_dssp SCEEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEEEE-ETTEEEEESSTTSS
T ss_pred CcEEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC--CeEEEEE-CCCeEEEECCCCCC
Confidence 357889998877777754 56654 2233334322222211 1133577888876 3444544 445443321
Q ss_pred --ccCCCCc-------ccc-ccCceEEEecCCCcEEEEEccCCCcc-eeeecCCCcceEEEEEccCCCEEEEeecCCcEE
Q psy8758 75 --IRQLNSP-------LNV-HKDMTSAAANEDFNLYSYDIRQLNSP-LNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLR 143 (198)
Q Consensus 75 --~~~~~~~-------~~~-~~~~~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~ 143 (198)
....... +.. ..+.+++. +.++.+ |.....++. ..........+..+++.|++++++.+...+..+
T Consensus 111 W~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~g~v--~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~ 187 (327)
T 2xbg_A 111 WSQIPLDPKLPGSPRLIKALGNGSAEMI-TNVGAI--YRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYS 187 (327)
T ss_dssp CEECCCCTTCSSCEEEEEEEETTEEEEE-ETTCCE--EEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEE
T ss_pred ceECccccCCCCCeEEEEEECCCCEEEE-eCCccE--EEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEE
Confidence 1100000 000 11122232 334433 222221221 122233455788999999988887765433333
Q ss_pred EEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEe
Q psy8758 144 LYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWK 189 (198)
Q Consensus 144 v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~ 189 (198)
-.|- .+..-..........+..+.++++++.++. +.+|.+++.+
T Consensus 188 S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~ 231 (327)
T 2xbg_A 188 TWEP-GQTAWEPHNRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSD 231 (327)
T ss_dssp EECT-TCSSCEEEECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEE
T ss_pred EeCC-CCCceeECCCCCCCccceeEECCCCCEEEE-eCCceEEEec
Confidence 3332 122222222344567889999999886654 4567776663
No 337
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.72 E-value=0.32 Score=34.10 Aligned_cols=65 Identities=15% Similarity=0.280 Sum_probs=36.2
Q ss_pred cCCCEEEEeec------CCcEEEEEcCCCceeeEEeccCc-ccEEEEEEcCCCCEEEEecCC-----CeEEEEecCCCc
Q psy8758 128 PTGREFVAGGY------DKSLRLYLAHQGHSRDIYHTKRM-QHVTHTVWSLDNKFVISASDE-----MNLRVWKAHASE 194 (198)
Q Consensus 128 p~~~~l~~~~~------d~~v~v~d~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~~~~~d-----g~v~~w~~~~~~ 194 (198)
.+++.++.|+. -..+.+||+.+.+....-..... .....+. -++++++.|+.+ ..+.+||+.+.+
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 46777777764 24689999988765443211111 1111222 256766666543 357788887643
No 338
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.61 E-value=0.87 Score=38.34 Aligned_cols=93 Identities=13% Similarity=0.095 Sum_probs=58.1
Q ss_pred EEEEEccCCCcceeeecCC-CcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEEEcCC-----
Q psy8758 99 LYSYDIRQLNSPLNVHKDM-TSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLD----- 172 (198)
Q Consensus 99 i~~~d~~~~~~~~~~~~~~-~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~----- 172 (198)
|++.+... ...+..+... ...|...+.+. ..++.++ .+.+.++.+..++........-...|.++++.|.
T Consensus 494 Irli~~~~-~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~ 569 (1158)
T 3ei3_A 494 VRLVSQEP-KALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNG 569 (1158)
T ss_dssp EEEEESSS-CCEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTT
T ss_pred EEEEECCC-CeEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcc
Confidence 55566543 2334444332 33566666543 4555554 6788888887665433222223468999999863
Q ss_pred -CCEEEEecC-CCeEEEEecCCCcc
Q psy8758 173 -NKFVISASD-EMNLRVWKAHASEK 195 (198)
Q Consensus 173 -~~~l~~~~~-dg~v~~w~~~~~~~ 195 (198)
+++++.|.. |++++++++.+.+.
T Consensus 570 ~s~~~aVg~~~d~tv~I~sL~~l~~ 594 (1158)
T 3ei3_A 570 LSPLCAIGLWTDISARILKLPSFEL 594 (1158)
T ss_dssp CCSEEEEEETTTTEEEEEETTTCCE
T ss_pred cccEEEEEECCCCEEEEEECCCCCe
Confidence 368898986 99999999987554
No 339
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.48 E-value=0.4 Score=33.64 Aligned_cols=52 Identities=12% Similarity=0.174 Sum_probs=28.5
Q ss_pred ECCCCceEEEee--CCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCC
Q psy8758 9 WSLDNKFVISAS--DEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANED 67 (198)
Q Consensus 9 ~s~~~~~l~~~~--~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d 67 (198)
|++++.+++... .++.|...+.+ +.....+... .+--+++++..|+.+...+
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~d-g~~~~~l~~~------~~~~i~~~g~~Iyy~~~~~ 74 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNID-GSNIHKLSND------TAMYINADKNYVYYVRNNN 74 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEETT-SCSCEEEEEE------EEEEEEECSSEEEEEEECC
T ss_pred EEEeCCEEEEEeCCCCceEEEEcCC-CCCCEEccCC------ceeeEEEcCCEEEEEECCC
Confidence 345666666553 34556555553 3333444321 1235678899998875443
No 340
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.32 E-value=0.19 Score=38.53 Aligned_cols=94 Identities=11% Similarity=0.036 Sum_probs=61.6
Q ss_pred cEEEEEccC----CCcceeeecCCCcceEEEEEccCCCEEEEeec-CCcEEEEEcCCC------ce-----eeEEeccCc
Q psy8758 98 NLYSYDIRQ----LNSPLNVHKDMTSAVTSVDYSPTGREFVAGGY-DKSLRLYLAHQG------HS-----RDIYHTKRM 161 (198)
Q Consensus 98 ~i~~~d~~~----~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~-d~~v~v~d~~~~------~~-----~~~~~~~~~ 161 (198)
.+.+.|.+. .......+ .-......+..+|||++++.++. +.++.++|+..- +. .......-.
T Consensus 299 gv~ViD~~~~~~~~~~~~~~i-P~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYV-PVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEE-EESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC
T ss_pred CeeEEccccccccCCceEEEE-eCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC
Confidence 366677654 11222222 23344567899999998887764 789999999842 11 001111223
Q ss_pred ccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758 162 QHVTHTVWSLDNKFVISASDEMNLRVWKAHA 192 (198)
Q Consensus 162 ~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~ 192 (198)
-.....+|.++|....+.--|..|.-|++..
T Consensus 378 lGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 378 LGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp SCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred CcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 5678899999996556667899999999864
No 341
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=95.31 E-value=0.63 Score=34.86 Aligned_cols=54 Identities=11% Similarity=0.067 Sum_probs=33.3
Q ss_pred ceeEEEECCCCc-eEEEeeCCCeEEEEEccCCceeeeeeee---e-------ecCceeeEEeCCC
Q psy8758 3 HVTHTVWSLDNK-FVISASDEMNLRVWKAHASEKLGPIRKV---V-------MSLRSNMVSWNPM 56 (198)
Q Consensus 3 ~v~~~~~s~~~~-~l~~~~~d~~i~i~~~~~~~~~~~~~~~---~-------~~~~v~~~~~~~~ 56 (198)
.-..|+|.|+|+ .++++...|.|++++.........+... . .......++|+|+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 346899999996 5666678899999975322111111111 0 1345678999986
No 342
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.21 E-value=0.56 Score=33.66 Aligned_cols=66 Identities=15% Similarity=0.152 Sum_probs=42.0
Q ss_pred ceEEEEEcc-------CCCEEEEeecCCcEEEEEcCCCceeeE--EeccCcccEEEEEEcCCCCEEEEec-CCCeE
Q psy8758 120 AVTSVDYSP-------TGREFVAGGYDKSLRLYLAHQGHSRDI--YHTKRMQHVTHTVWSLDNKFVISAS-DEMNL 185 (198)
Q Consensus 120 ~i~~~~~sp-------~~~~l~~~~~d~~v~v~d~~~~~~~~~--~~~~~~~~v~~~~~s~~~~~l~~~~-~dg~v 185 (198)
.+..++|.+ +|+++++.-..+.|...++..++.... +.......+..+++.|||.++++.. .+|.|
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I 347 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGEL 347 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEE
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEE
Confidence 456677753 466777666678888888876543322 2122235799999999999666432 34544
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.18 E-value=0.9 Score=35.92 Aligned_cols=181 Identities=7% Similarity=0.068 Sum_probs=89.8
Q ss_pred CCCceEEEeeCC----CeEEEEEccCCceeeeee-e-----eeecCceeeEEeCC-CCCeEEEEecCC------ccEEEE
Q psy8758 11 LDNKFVISASDE----MNLRVWKAHASEKLGPIR-K-----VVMSLRSNMVSWNP-MEAFVFTAANED------FNLYSY 73 (198)
Q Consensus 11 ~~~~~l~~~~~d----~~i~i~~~~~~~~~~~~~-~-----~~~~~~v~~~~~~~-~~~~~~~~~~~d------~~i~~~ 73 (198)
.++..++.|+.+ ..+.+||..+++-.. +. . ......-.+++..+ ++. +++.|+.+ ..+.+|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~-~~~~~p~~~~p~~R~~hs~~~~~~~~~-lyv~GG~~~~~~~~~dv~~y 473 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDM-KNIEVSSSEVPVARMCHTFTTISRNNQ-LLLIGGRKAPHQGLSDNWIF 473 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEE-EECCCCCSCCCCCCBSCEEEEETTTTE-EEEECCBSSTTCBCCCCEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEE-eccCCCCCCCCccccceEEEEEccCCE-EEEEcCCCCCCCccccEEEE
Confidence 355666666643 457788887664322 22 1 01111112223332 444 44444432 347888
Q ss_pred eccCCCC--------c-----ccc-ccCceEEEecCCC--cEEEEEccCCCcceee-----ecCCCcceEEEEEccC-CC
Q psy8758 74 DIRQLNS--------P-----LNV-HKDMTSAAANEDF--NLYSYDIRQLNSPLNV-----HKDMTSAVTSVDYSPT-GR 131 (198)
Q Consensus 74 d~~~~~~--------~-----~~~-~~~~~~~~~~~~~--~i~~~d~~~~~~~~~~-----~~~~~~~i~~~~~sp~-~~ 131 (198)
|..+..- . ... ..+.+++.|+.++ .+.+||+.+ ..-... ..........+.+..+ ++
T Consensus 474 d~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t-~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~ 552 (695)
T 2zwa_A 474 DMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTE-EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQ 552 (695)
T ss_dssp ETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTT-TEEEECCCSSGGGGSCCBSCEEEEETTTTE
T ss_pred eCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCC-CceEEccCCCCCCCcccceeEEEEeCCCCE
Confidence 8765321 0 111 2445666666544 688898876 221111 1111122233556655 66
Q ss_pred EEEEeec--C-----CcEEEEEcCCCc------eeeEEeccCccc-EEEEEEcCCCCEEEEecC--------CCeEEEEe
Q psy8758 132 EFVAGGY--D-----KSLRLYLAHQGH------SRDIYHTKRMQH-VTHTVWSLDNKFVISASD--------EMNLRVWK 189 (198)
Q Consensus 132 ~l~~~~~--d-----~~v~v~d~~~~~------~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~--------dg~v~~w~ 189 (198)
.++.|+. + +.+.+||+.+.. ............ -.++....++++++.|+. ...+.+||
T Consensus 553 iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd 632 (695)
T 2zwa_A 553 GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLD 632 (695)
T ss_dssp EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEE
T ss_pred EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEE
Confidence 7777776 2 468899998877 222211000111 112223333677777763 35689999
Q ss_pred cCCCc
Q psy8758 190 AHASE 194 (198)
Q Consensus 190 ~~~~~ 194 (198)
+.+.+
T Consensus 633 ~~t~~ 637 (695)
T 2zwa_A 633 PLSET 637 (695)
T ss_dssp TTTTE
T ss_pred CCCCe
Confidence 87653
No 344
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=94.39 E-value=0.31 Score=37.70 Aligned_cols=59 Identities=17% Similarity=0.155 Sum_probs=44.1
Q ss_pred eEEEEEccCCCEEEEeecC------------CcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe
Q psy8758 121 VTSVDYSPTGREFVAGGYD------------KSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA 179 (198)
Q Consensus 121 i~~~~~sp~~~~l~~~~~d------------~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 179 (198)
.-.|+|+|.|++++.-..+ +.+.+.+..+++....+.......++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4678999999977765432 3466677777887766655556789999999999987655
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.33 E-value=2.4 Score=36.74 Aligned_cols=153 Identities=10% Similarity=0.027 Sum_probs=88.7
Q ss_pred cceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeee-eeee--ecCceeeEEeCCCCCeEEEEec------CCccEEE
Q psy8758 2 QHVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPI-RKVV--MSLRSNMVSWNPMEAFVFTAAN------EDFNLYS 72 (198)
Q Consensus 2 ~~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~-~~~~--~~~~v~~~~~~~~~~~~~~~~~------~d~~i~~ 72 (198)
++|.--.|-.+.. |+..+ +..|.-|++.....+..+ ..+. ....|..-.-+++.++++.+|- -.|.+.+
T Consensus 106 e~VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQL 183 (1630)
T 1xi4_A 106 DDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQL 183 (1630)
T ss_pred CCceEEEecCCCe-eEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeee
Confidence 3455556654443 33333 347999999643322222 1111 2345666777889999887762 3477889
Q ss_pred EeccCCC-CccccccC--------------ceEEEec---CCCcEEEEEccCC--Cccee------eecC---CCcceEE
Q psy8758 73 YDIRQLN-SPLNVHKD--------------MTSAAAN---EDFNLYSYDIRQL--NSPLN------VHKD---MTSAVTS 123 (198)
Q Consensus 73 ~d~~~~~-~~~~~~~~--------------~~~~~~~---~~~~i~~~d~~~~--~~~~~------~~~~---~~~~i~~ 123 (198)
|..+... +.+.+|.. .+++.+. ..+++++.++..+ +.+.. .+.. ..+-..+
T Consensus 184 yS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~ 263 (1630)
T 1xi4_A 184 YSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVA 263 (1630)
T ss_pred eecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceE
Confidence 9887554 23333321 2222221 2378999988642 11111 1111 1223456
Q ss_pred EEEccCCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758 124 VDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY 156 (198)
Q Consensus 124 ~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 156 (198)
|..|+.-..+..-+.-|.+.+||+.++.++..-
T Consensus 264 ~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ 296 (1630)
T 1xi4_A 264 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMN 296 (1630)
T ss_pred EEeccccCEEEEEecCceEEEEecccchhhhhc
Confidence 777777777777788899999999999887654
No 346
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=93.58 E-value=0.83 Score=35.18 Aligned_cols=61 Identities=15% Similarity=0.147 Sum_probs=43.0
Q ss_pred cceEEEEEccCCCEEEEeec------------CCcEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEe
Q psy8758 119 SAVTSVDYSPTGREFVAGGY------------DKSLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISA 179 (198)
Q Consensus 119 ~~i~~~~~sp~~~~l~~~~~------------d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 179 (198)
.....|.|+++|.+.+.... .+.+..++..+++....+.......++.++|+||++.|+.+
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 34678999999997774321 22567777777877665533334679999999999987765
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.13 E-value=2.9 Score=31.36 Aligned_cols=28 Identities=4% Similarity=-0.148 Sum_probs=20.8
Q ss_pred ceeeEEeCCCCC-eEEEEecCCccEEEEec
Q psy8758 47 RSNMVSWNPMEA-FVFTAANEDFNLYSYDI 75 (198)
Q Consensus 47 ~v~~~~~~~~~~-~~~~~~~~d~~i~~~d~ 75 (198)
....++|.|++. .++++ ...|.|++++.
T Consensus 15 ~P~~~a~~pdG~~rl~V~-er~G~i~~~~~ 43 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFIL-EKEGYVKILTP 43 (463)
T ss_dssp SEEEEECCSSSSCCEEEE-ETTTEEEEECT
T ss_pred CceEEEECCCCCeEEEEE-eCCceEEEEeC
Confidence 357899999996 45554 57888988864
No 348
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=90.58 E-value=1.9 Score=35.58 Aligned_cols=37 Identities=14% Similarity=0.101 Sum_probs=32.2
Q ss_pred ceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758 120 AVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY 156 (198)
Q Consensus 120 ~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 156 (198)
.+.+++..++..++++-+.|+++|+|++.+++++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4677788888889999999999999999999887665
No 349
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=90.27 E-value=1.6 Score=33.79 Aligned_cols=59 Identities=8% Similarity=0.072 Sum_probs=38.7
Q ss_pred eEEEECCCCceEEEeeCC------------CeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEe
Q psy8758 5 THTVWSLDNKFVISASDE------------MNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAA 64 (198)
Q Consensus 5 ~~~~~s~~~~~l~~~~~d------------~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 64 (198)
=.|+|+|.|++++.-..+ ..+.+.+..+++. ..+........++.++|+||++.+|+.-
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~-~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeE-EEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 357899999966654322 2344455555554 3333334567889999999999998763
No 350
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=89.75 E-value=4.3 Score=29.16 Aligned_cols=176 Identities=9% Similarity=0.080 Sum_probs=88.6
Q ss_pred ceeEEEECCC----CceEEEee--CCCeEEEEEccCCc-------eeee-eeeee--ecCceeeEEeCCCCCeEEEEecC
Q psy8758 3 HVTHTVWSLD----NKFVISAS--DEMNLRVWKAHASE-------KLGP-IRKVV--MSLRSNMVSWNPMEAFVFTAANE 66 (198)
Q Consensus 3 ~v~~~~~s~~----~~~l~~~~--~d~~i~i~~~~~~~-------~~~~-~~~~~--~~~~v~~~~~~~~~~~~~~~~~~ 66 (198)
....++++|+ +.+.++-+ .++.|.-|.+..+. .... +.... .......+.|.|++...++.|+.
T Consensus 81 GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~ 160 (347)
T 3das_A 81 GLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGES 160 (347)
T ss_dssp SEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCT
T ss_pred CceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCC
Confidence 3568999995 44333322 34556556655421 1111 11111 11234679999999877776531
Q ss_pred ------------CccEEEEeccCCC---------Ccc-ccccCceEEEecCCCcEEEEEccCCC-ccee-----------
Q psy8758 67 ------------DFNLYSYDIRQLN---------SPL-NVHKDMTSAAANEDFNLYSYDIRQLN-SPLN----------- 112 (198)
Q Consensus 67 ------------d~~i~~~d~~~~~---------~~~-~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~----------- 112 (198)
.+.|.-++..... ..+ .++.+..-++...+|.+++-|..... ..+.
T Consensus 161 ~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP 240 (347)
T 3das_A 161 GDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWP 240 (347)
T ss_dssp TCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTT
T ss_pred CCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCC
Confidence 2445444543221 011 13344444444556777665543210 1111
Q ss_pred ----------------eecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce---eeEEeccCcccEEEEEEcCCC
Q psy8758 113 ----------------VHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS---RDIYHTKRMQHVTHTVWSLDN 173 (198)
Q Consensus 113 ----------------~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~---~~~~~~~~~~~v~~~~~s~~~ 173 (198)
.+..+......|+|. +|..++..-..+.|....+..... ...+..+....+..++..|||
T Consensus 241 ~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG 319 (347)
T 3das_A 241 EAEGKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGD 319 (347)
T ss_dssp TCCSSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETT
T ss_pred cccCCCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCC
Confidence 111111234556665 355555554556676666655432 122323444689999999999
Q ss_pred CEEEEe
Q psy8758 174 KFVISA 179 (198)
Q Consensus 174 ~~l~~~ 179 (198)
.++++-
T Consensus 320 ~lyv~t 325 (347)
T 3das_A 320 KLWLVT 325 (347)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 866553
No 351
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=89.10 E-value=4.6 Score=28.62 Aligned_cols=50 Identities=8% Similarity=-0.120 Sum_probs=26.5
Q ss_pred CcEEEEEcCCCceeeEEeccCcccE-EEEEEcCCCCEEEEecC------CCeEEEEec
Q psy8758 140 KSLRLYLAHQGHSRDIYHTKRMQHV-THTVWSLDNKFVISASD------EMNLRVWKA 190 (198)
Q Consensus 140 ~~v~v~d~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~------dg~v~~w~~ 190 (198)
..+.+||..+.+....-.......- .+++. -++++++.|+. ...+..||+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEEC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEe
Confidence 5789999988765544321111111 12222 25666666653 345777776
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=88.39 E-value=0.67 Score=38.12 Aligned_cols=35 Identities=11% Similarity=0.207 Sum_probs=30.6
Q ss_pred cEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758 163 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE 197 (198)
Q Consensus 163 ~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~ 197 (198)
.+.+++..++..++++-+.|+++++|++.+++++.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 271 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEe
Confidence 56777888888899999999999999999998764
No 353
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=88.04 E-value=8.6 Score=30.46 Aligned_cols=28 Identities=14% Similarity=0.170 Sum_probs=19.5
Q ss_pred EccCCCEEEEeec--------CCcEEEEEcCCCcee
Q psy8758 126 YSPTGREFVAGGY--------DKSLRLYLAHQGHSR 153 (198)
Q Consensus 126 ~sp~~~~l~~~~~--------d~~v~v~d~~~~~~~ 153 (198)
...+++.++.|+. ...+.+||+.+.+..
T Consensus 604 ~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 604 YITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp EEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred EeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 3334777788774 346999999887654
No 354
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=86.93 E-value=5.5 Score=30.81 Aligned_cols=62 Identities=8% Similarity=0.052 Sum_probs=39.4
Q ss_pred ceeEEEECCCCceEEEeeC------------CCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEec
Q psy8758 3 HVTHTVWSLDNKFVISASD------------EMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAAN 65 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~------------d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 65 (198)
....|.|.++|.+.+.... ...+..++..+++. ..+........++.++|+||++.|+++-.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel-~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeE-EEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 3467899999987763321 11455556556653 33322222356799999999999988753
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=83.64 E-value=0.66 Score=38.96 Aligned_cols=35 Identities=11% Similarity=0.207 Sum_probs=28.8
Q ss_pred cEEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758 163 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE 197 (198)
Q Consensus 163 ~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~ 197 (198)
.+.+++..++..++++-+.|+++++|++.+++++.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~ 273 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 273 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEE
Confidence 34455666788899999999999999999998764
No 356
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=80.60 E-value=2 Score=36.19 Aligned_cols=36 Identities=14% Similarity=0.098 Sum_probs=30.1
Q ss_pred eEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758 121 VTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY 156 (198)
Q Consensus 121 i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 156 (198)
+.+++..++..++++-+.|+++|+|++.+++++...
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 455666778889999999999999999999887664
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=78.30 E-value=3.4 Score=32.83 Aligned_cols=32 Identities=9% Similarity=0.508 Sum_probs=25.7
Q ss_pred EEEEEEcCCCCEEEEecCCCeEEEEecCCCcccc
Q psy8758 164 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLE 197 (198)
Q Consensus 164 v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~~~~ 197 (198)
|.++.+ +..++++-+.|.++++|++++++++.
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~ 255 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQ 255 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEE
Confidence 554444 46799999999999999999998753
No 358
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=78.24 E-value=17 Score=26.47 Aligned_cols=177 Identities=8% Similarity=0.136 Sum_probs=90.5
Q ss_pred ceeEEEECCCCceEEE--ee-------------CCCeEEEEEccCC--ceeeeeeeee----ecCceeeEEeC---CC--
Q psy8758 3 HVTHTVWSLDNKFVIS--AS-------------DEMNLRVWKAHAS--EKLGPIRKVV----MSLRSNMVSWN---PM-- 56 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~--~~-------------~d~~i~i~~~~~~--~~~~~~~~~~----~~~~v~~~~~~---~~-- 56 (198)
.|..+...+++++-+. |- .--+|.+||+.+. +.++.+.-.. .......+.+. |.
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~ 167 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGD 167 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCC
Confidence 5677777777663322 21 0125778999888 7665554321 12345566665 22
Q ss_pred --CCeEEEEecCCccEEEEeccCCCCccccccCceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccC----C
Q psy8758 57 --EAFVFTAANEDFNLYSYDIRQLNSPLNVHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPT----G 130 (198)
Q Consensus 57 --~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~----~ 130 (198)
+.+++.+-+....|.++|+.+...--..|... ..+. -..+.+. +.... -...+..|+++|+ +
T Consensus 168 c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~-----~pd~-~~~~~i~--G~~~~----~~~Gi~gIaLsp~~~~~~ 235 (381)
T 3q6k_A 168 CSETFVYITNFLRGALFIYDHKKQDSWNVTHPTF-----KAER-PTKFDYG--GKEYE----FKAGIFGITLGDRDSEGN 235 (381)
T ss_dssp SCSEEEEEEETTTTEEEEEETTTTEEEEEECGGG-----SCCS-CEEEEET--TEEEE----ECCCEEEEEECCCCTTSC
T ss_pred CCccEEEEEcCCCCcEEEEECCCCcEEEEccCCC-----cccc-CcceEEC--CEEeE----eccCceEEEecCCcCCCC
Confidence 33444443445667777776543110001000 0000 0000000 11111 1356899999998 7
Q ss_pred CEEEEeecCCcEEEEEcCC-----C---ceeeEE-eccCcccEEEEEEc-CCCCEEEEecCCCeEEEEecCC
Q psy8758 131 REFVAGGYDKSLRLYLAHQ-----G---HSRDIY-HTKRMQHVTHTVWS-LDNKFVISASDEMNLRVWKAHA 192 (198)
Q Consensus 131 ~~l~~~~~d~~v~v~d~~~-----~---~~~~~~-~~~~~~~v~~~~~s-~~~~~l~~~~~dg~v~~w~~~~ 192 (198)
+.|......+ -++|.+.+ . ..+..+ ..+....-..++.. .+|.++++--..+.|..|+..+
T Consensus 236 ~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 236 RPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp CEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred eEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 7777766544 24444432 1 112222 11111334456775 5787777777889999999875
No 359
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=75.51 E-value=7.1 Score=31.10 Aligned_cols=34 Identities=9% Similarity=0.055 Sum_probs=27.8
Q ss_pred eEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEE
Q psy8758 121 VTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIY 156 (198)
Q Consensus 121 i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~ 156 (198)
|.++.+ +..++++-+.|..+|+|++.+++++...
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 444444 4679999999999999999999987765
No 360
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=68.97 E-value=42 Score=26.70 Aligned_cols=177 Identities=12% Similarity=0.089 Sum_probs=90.3
Q ss_pred ceeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCc-
Q psy8758 3 HVTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSP- 81 (198)
Q Consensus 3 ~v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~- 81 (198)
.|.++.-..+|. |..|+.+| +..||..+.+... ... .....|.++.. .++ .+.++ ..+ -+..+|..+....
T Consensus 64 ~i~~i~~d~~g~-lWigT~~G-l~~yd~~~~~f~~-~~~-~~~~~i~~i~~-~~g-~lWig-t~~-Gl~~~~~~~~~~~~ 135 (758)
T 3ott_A 64 RIYCGVIIDNTY-LYMGTDNG-ILVYNYRADRYEQ-PET-DFPTDVRTMAL-QGD-TLWLG-ALN-GLYTYQLQSRKLTS 135 (758)
T ss_dssp CEEEEEEETTTE-EEEEETTE-EEEEETTTTEECC-CSC-CCCSCEEEEEE-ETT-EEEEE-ETT-EEEEEETTTCCEEE
T ss_pred eEEEEEEcCCCc-EEEEeCCC-eEEEeCCCCEEEC-ccc-CCCceEEEEEe-cCC-cEEEE-cCC-cceeEeCCCCeEEE
Confidence 366666666664 44555554 7788986653211 100 11223555543 344 44443 344 5777776543211
Q ss_pred cc---------------cccCceEEEecCCCcEEEEEccCCCcceeeecC------CCcceEEEEEccCCCEEEEeecCC
Q psy8758 82 LN---------------VHKDMTSAAANEDFNLYSYDIRQLNSPLNVHKD------MTSAVTSVDYSPTGREFVAGGYDK 140 (198)
Q Consensus 82 ~~---------------~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~------~~~~i~~~~~sp~~~~l~~~~~d~ 140 (198)
+. ...+..+..++. +.+..++..+ .. ...+.. ....|.++...+++..|-.+.. +
T Consensus 136 ~~~~~~~l~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~-~~-~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~ 211 (758)
T 3ott_A 136 FDTRRNGLPNNTIYSIIRTKDNQIYVGTY-NGLCRYIPSN-GK-FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-G 211 (758)
T ss_dssp ECHHHHCCSCSCEEEEEECTTCCEEEEET-TEEEEEETTT-TE-EEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-E
T ss_pred eccCCCCcCCCeEEEEEEcCCCCEEEEeC-CCHhhCccCC-Cc-eEEecCCCccccccceeEEEEEECCCCEEEEEEC-C
Confidence 10 001112333333 3456666654 22 222211 1224788888777664444443 3
Q ss_pred cEEEEEcCCCceeeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 141 SLRLYLAHQGHSRDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 141 ~v~v~d~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
-+..+|..+++..... ......|.++...++|.+.+.. . +-+.+++..+++
T Consensus 212 Gl~~~~~~~~~~~~~~-~l~~~~i~~i~~d~~g~lWigT-~-~Gl~~~~~~~~~ 262 (758)
T 3ott_A 212 YLFQYFPSTGQIKQTE-AFHNNSIKSLALDGNGDLLAGT-D-NGLYVYHNDTTP 262 (758)
T ss_dssp EEEEEETTTTEEEEEE-EEEEEEEEEEEECTTCCEEEEE-T-TEEEEECCTTSC
T ss_pred CCeEEcCCCCeEEecc-CCCCCeEEEEEEcCCCCEEEEe-C-CceeEEecCCCc
Confidence 5888898776543322 1122468888888888866543 3 457788776543
No 361
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=66.51 E-value=35 Score=24.89 Aligned_cols=59 Identities=14% Similarity=0.175 Sum_probs=38.7
Q ss_pred eEEEEEc-cCCCEEEEeecCCcEEEEEcCC-C----ceeeEEeccCcccEEEEEEcCCCCEEEEe
Q psy8758 121 VTSVDYS-PTGREFVAGGYDKSLRLYLAHQ-G----HSRDIYHTKRMQHVTHTVWSLDNKFVISA 179 (198)
Q Consensus 121 i~~~~~s-p~~~~l~~~~~d~~v~v~d~~~-~----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 179 (198)
-..+++. .+|.++++--..+.|..|+..+ . ..........-..+..+.+.++|.+.+.+
T Consensus 277 ~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 277 AIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp EEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred cceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 3456775 5777777777889999999876 2 12222222333567888888888765544
No 362
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=62.29 E-value=39 Score=25.99 Aligned_cols=68 Identities=16% Similarity=0.141 Sum_probs=41.4
Q ss_pred ceEEEEEccCCC--EEEEeecCCcEEEEEcCCCc----eeeEEec-cCcccEE-EEEEcCCCCEEEEecCCCeEEE
Q psy8758 120 AVTSVDYSPTGR--EFVAGGYDKSLRLYLAHQGH----SRDIYHT-KRMQHVT-HTVWSLDNKFVISASDEMNLRV 187 (198)
Q Consensus 120 ~i~~~~~sp~~~--~l~~~~~d~~v~v~d~~~~~----~~~~~~~-~~~~~v~-~~~~s~~~~~l~~~~~dg~v~~ 187 (198)
..++++....+. .+..|..+|.|.-..+.... ....+.. ....+|. .|.+++++.+|+.++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 355566554333 56678888877655554321 1222211 2245775 8999999999998887665544
No 363
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=61.93 E-value=50 Score=25.08 Aligned_cols=68 Identities=7% Similarity=0.012 Sum_probs=41.7
Q ss_pred ceEEEEEcc----CCC--EEEEeecCCcEEEEEcC-CCc-------eeeEEec-cCcccEEEEEEcCCCCEEEEecCCCe
Q psy8758 120 AVTSVDYSP----TGR--EFVAGGYDKSLRLYLAH-QGH-------SRDIYHT-KRMQHVTHTVWSLDNKFVISASDEMN 184 (198)
Q Consensus 120 ~i~~~~~sp----~~~--~l~~~~~d~~v~v~d~~-~~~-------~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~ 184 (198)
..++|+... ++. .+..|..+|.|.-.-+. .+. .+..+.. ....+|..|.+++++++|+.++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 456666543 243 56678888876544332 211 1222211 23478999999999999999988776
Q ss_pred EEE
Q psy8758 185 LRV 187 (198)
Q Consensus 185 v~~ 187 (198)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 364
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=61.50 E-value=43 Score=25.41 Aligned_cols=57 Identities=7% Similarity=0.011 Sum_probs=36.2
Q ss_pred ceEEEecCCCcEEEEEccCCC-------cceeeec--CCCcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758 88 MTSAAANEDFNLYSYDIRQLN-------SPLNVHK--DMTSAVTSVDYSPTGREFVAGGYDKSLRL 144 (198)
Q Consensus 88 ~~~~~~~~~~~i~~~d~~~~~-------~~~~~~~--~~~~~i~~~~~sp~~~~l~~~~~d~~v~v 144 (198)
.++..|+.+|.|.-.-+.... ..+..+. ....+|..|.++++..+|..++.++.++|
T Consensus 422 tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 422 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 357788888887544332111 1222332 23568899999999999999888775544
No 365
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=56.46 E-value=49 Score=23.22 Aligned_cols=180 Identities=9% Similarity=0.030 Sum_probs=97.5
Q ss_pred CCCceEEEeeCCCeEEEEEccCCceee----ee--eeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccC---CCC-
Q psy8758 11 LDNKFVISASDEMNLRVWKAHASEKLG----PI--RKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQ---LNS- 80 (198)
Q Consensus 11 ~~~~~l~~~~~d~~i~i~~~~~~~~~~----~~--~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~---~~~- 80 (198)
++...+++.+.+|.|+--.+..-+... -. ........+..+........++.. +..|.++-..... ...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~-T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMI-SNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEE-ETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEE-ECCCeEEEEEHHHCCCCCcc
Confidence 567788899999999988765332111 01 011223444444444444555544 4677766655431 100
Q ss_pred --------c--cc----------c---ccCceEEEecCCCcEEEEEccCC------CcceeeecCCCcceEEEEEccCCC
Q psy8758 81 --------P--LN----------V---HKDMTSAAANEDFNLYSYDIRQL------NSPLNVHKDMTSAVTSVDYSPTGR 131 (198)
Q Consensus 81 --------~--~~----------~---~~~~~~~~~~~~~~i~~~d~~~~------~~~~~~~~~~~~~i~~~~~sp~~~ 131 (198)
. +. . .....++..+..|.++...+... +.....+.. .+.+-.+....+..
T Consensus 85 ~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 0 00 0 12345667788888887776431 111122232 34555555544456
Q ss_pred EEEEeecCCcEEEEEcCCCce-------eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCC
Q psy8758 132 EFVAGGYDKSLRLYLAHQGHS-------RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHA 192 (198)
Q Consensus 132 ~l~~~~~d~~v~v~d~~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~ 192 (198)
.++..+.+|....+....-.. +..+.......|.++..-+++..+++.+..|..+...+..
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 788888899988888764111 1111112235666666555566677788888888887743
No 366
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=56.42 E-value=74 Score=25.31 Aligned_cols=74 Identities=5% Similarity=0.007 Sum_probs=46.5
Q ss_pred cceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEecc--CcccEEEEEEcCCCCEEEEecCCCeEEEEecCCCc
Q psy8758 119 SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTK--RMQHVTHTVWSLDNKFVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 119 ~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~~ 194 (198)
..|.++...++|++.+.++..+-+..+|..+++........ ....+.++....+|.+.+.. .. -+..++.++++
T Consensus 472 ~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~~-Gl~~~~~~~~~ 547 (758)
T 3ott_A 472 MFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-HG-GVMRINPKDES 547 (758)
T ss_dssp SCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-TT-EEEEECC--CC
T ss_pred ceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-cC-ceEEEecCCCc
Confidence 35888988888987663333345888998876654332111 12467888888888876643 34 47788876554
No 367
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=52.47 E-value=62 Score=23.22 Aligned_cols=21 Identities=5% Similarity=-0.134 Sum_probs=13.5
Q ss_pred cEEEEEEcCC-CCEEEEecCCC
Q psy8758 163 HVTHTVWSLD-NKFVISASDEM 183 (198)
Q Consensus 163 ~v~~~~~s~~-~~~l~~~~~dg 183 (198)
.+..+.++|+ ...|..+...+
T Consensus 233 ~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp CEEEEEECSSSTTEEEEEETTE
T ss_pred ceeEEEECCCCCCEEEEEcCCe
Confidence 4888999986 34555555443
No 368
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=48.34 E-value=1.1e+02 Score=24.80 Aligned_cols=56 Identities=13% Similarity=0.229 Sum_probs=32.9
Q ss_pred cceeEEEECCC-CceEEEeeCCCeEEEEEccCCceeeeeeeee-----ecCceeeEEeCCCCC
Q psy8758 2 QHVTHTVWSLD-NKFVISASDEMNLRVWKAHASEKLGPIRKVV-----MSLRSNMVSWNPMEA 58 (198)
Q Consensus 2 ~~v~~~~~s~~-~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~ 58 (198)
+.|.+++++|. ...+++++..+.|...+ +.++.-..+.... ....+.+++++|...
T Consensus 15 g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~ 76 (789)
T 1sqj_A 15 GYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNP 76 (789)
T ss_dssp SCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEE
T ss_pred CcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCC
Confidence 56899999995 45666677666654443 2344333332211 123578899988543
No 369
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=44.75 E-value=96 Score=24.68 Aligned_cols=56 Identities=7% Similarity=0.073 Sum_probs=33.8
Q ss_pred eEEEecCCCcEEE-EEccCCC-c-----ceeee--cCCCcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758 89 TSAAANEDFNLYS-YDIRQLN-S-----PLNVH--KDMTSAVTSVDYSPTGREFVAGGYDKSLRL 144 (198)
Q Consensus 89 ~~~~~~~~~~i~~-~d~~~~~-~-----~~~~~--~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v 144 (198)
++..|+.+|.|.- .-..... . .+..+ .....+|..|.++++.+.|.+++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 4667788888753 2221100 0 12222 234567899999999999999887765443
No 370
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=44.48 E-value=44 Score=19.24 Aligned_cols=12 Identities=8% Similarity=-0.144 Sum_probs=5.2
Q ss_pred EecCCCeEEEEe
Q psy8758 178 SASDEMNLRVWK 189 (198)
Q Consensus 178 ~~~~dg~v~~w~ 189 (198)
.--.||.+.+++
T Consensus 94 ~L~~dGnlvly~ 105 (113)
T 3mez_B 94 ILQINGQAVVYG 105 (113)
T ss_dssp EECTTSCEEEEC
T ss_pred EEcCCceEEEec
Confidence 333444444443
No 371
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=43.20 E-value=88 Score=24.04 Aligned_cols=68 Identities=13% Similarity=0.094 Sum_probs=41.6
Q ss_pred ceEEEEEccC-C-CEEEEeecCCcEEEEEcC-CC--ceeeEEeccCcccE-EEEEEcCCCCEEEEecCCCeEEE
Q psy8758 120 AVTSVDYSPT-G-REFVAGGYDKSLRLYLAH-QG--HSRDIYHTKRMQHV-THTVWSLDNKFVISASDEMNLRV 187 (198)
Q Consensus 120 ~i~~~~~sp~-~-~~l~~~~~d~~v~v~d~~-~~--~~~~~~~~~~~~~v-~~~~~s~~~~~l~~~~~dg~v~~ 187 (198)
..+.|+...- + ..+..|..+|.|.-.-+. .+ .....+......+| ..|.++++...|+.++.++.+++
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 3566665432 2 255677888887654443 21 22233323344677 48999999999988888776665
No 372
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=42.37 E-value=34 Score=22.08 Aligned_cols=34 Identities=6% Similarity=0.184 Sum_probs=23.2
Q ss_pred cccEEEEEEcCCCC-EEEEecCCCeEEEEecCCCc
Q psy8758 161 MQHVTHTVWSLDNK-FVISASDEMNLRVWKAHASE 194 (198)
Q Consensus 161 ~~~v~~~~~s~~~~-~l~~~~~dg~v~~w~~~~~~ 194 (198)
...+.++.|...+. .+++.+.+|++.++|.+=||
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 34455666665432 46666778999999998776
No 373
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=41.57 E-value=1.3e+02 Score=23.63 Aligned_cols=56 Identities=5% Similarity=-0.043 Sum_probs=35.0
Q ss_pred EEEEeecCCcEEEEEcCC-Cc---e--eeEEec-cCcccEEEEEEcCCCCEEEEecCCCeEEE
Q psy8758 132 EFVAGGYDKSLRLYLAHQ-GH---S--RDIYHT-KRMQHVTHTVWSLDNKFVISASDEMNLRV 187 (198)
Q Consensus 132 ~l~~~~~d~~v~v~d~~~-~~---~--~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~v~~ 187 (198)
.+..|..+|.|.-.-... +. . +..+.. ....+|..|.++++...|+.++.++.+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 566788888766433322 21 1 111211 23468899999999898888887766555
No 374
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=41.10 E-value=1.1e+02 Score=23.97 Aligned_cols=56 Identities=4% Similarity=-0.060 Sum_probs=33.8
Q ss_pred ceEEEecCCCcEEEEEccCCCc---c--eeeec--CCCcceEEEEEccCCCEEEEeecCCcEE
Q psy8758 88 MTSAAANEDFNLYSYDIRQLNS---P--LNVHK--DMTSAVTSVDYSPTGREFVAGGYDKSLR 143 (198)
Q Consensus 88 ~~~~~~~~~~~i~~~d~~~~~~---~--~~~~~--~~~~~i~~~~~sp~~~~l~~~~~d~~v~ 143 (198)
.++..|+.+|.|.-.-+..... . +..+. ....+|..|.++++...|..++.++.++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~q 443 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQ 443 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEE
Confidence 3567788888876433322110 1 12222 2456789999999988888877665433
No 375
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=40.51 E-value=1.4e+02 Score=23.81 Aligned_cols=56 Identities=5% Similarity=-0.066 Sum_probs=35.0
Q ss_pred EEEEeecCCcEE-EEEcCCCc-------eeeEE-eccCcccEEEEEEcCCCCEEEEecCCCeEEE
Q psy8758 132 EFVAGGYDKSLR-LYLAHQGH-------SRDIY-HTKRMQHVTHTVWSLDNKFVISASDEMNLRV 187 (198)
Q Consensus 132 ~l~~~~~d~~v~-v~d~~~~~-------~~~~~-~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~ 187 (198)
.+..|..+|.|. +....... .+..+ ......+|..|.++++++.|+.++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 566788888764 33222211 11111 1134568899999999999999988776654
No 376
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=37.24 E-value=1.1e+02 Score=23.66 Aligned_cols=61 Identities=7% Similarity=0.083 Sum_probs=34.7
Q ss_pred ceEEEeeCCCeEEEEEccCCc----eeeeeeeeeecCcee-eEEeCCCCCeEEEEecCCccEEEEecc
Q psy8758 14 KFVISASDEMNLRVWKAHASE----KLGPIRKVVMSLRSN-MVSWNPMEAFVFTAANEDFNLYSYDIR 76 (198)
Q Consensus 14 ~~l~~~~~d~~i~i~~~~~~~----~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~d~~i~~~d~~ 76 (198)
..+..|+.+|.|.-..+.... ....+.......+|. .+.++++...|++. +. ..|.-..+.
T Consensus 414 tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~-s~-~~V~kvpl~ 479 (539)
T 3al9_A 414 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVM-SE-RQVTRVPVE 479 (539)
T ss_dssp EEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEE-CS-SEEEEEESC
T ss_pred EEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEE-ec-cccceeehh
Confidence 467778899988655554321 122222222245674 89999988888874 33 344333333
No 377
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=37.22 E-value=1.5e+02 Score=23.21 Aligned_cols=47 Identities=11% Similarity=-0.002 Sum_probs=25.2
Q ss_pred CceeeEEeccCcccEEEEEEcCCC--CEEEEecCCC----eEEEEecCCCccc
Q psy8758 150 GHSRDIYHTKRMQHVTHTVWSLDN--KFVISASDEM----NLRVWKAHASEKL 196 (198)
Q Consensus 150 ~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg----~v~~w~~~~~~~~ 196 (198)
|+.+.....+|...+.-..|.|+. ..++.+.+++ -..+.|..+|+.+
T Consensus 352 G~~L~st~~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vl 404 (591)
T 2zux_A 352 GKGMYSTGLGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKIL 404 (591)
T ss_dssp SCEEEECSCCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEE
T ss_pred CCEeeeCCCCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEE
Confidence 333333334666666666777763 3444444431 2445677777654
No 378
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=36.21 E-value=1e+02 Score=21.09 Aligned_cols=172 Identities=9% Similarity=0.007 Sum_probs=79.9
Q ss_pred eeEEEECCCCceEEEeeCCCeEEEEEccCCceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC---
Q psy8758 4 VTHTVWSLDNKFVISASDEMNLRVWKAHASEKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS--- 80 (198)
Q Consensus 4 v~~~~~s~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~--- 80 (198)
|..++-... ..++. . ||.+..|-......+-. .. .....|..++... .+.++. . |+.++.|-....-+
T Consensus 26 i~~ia~G~~-h~~~l-~-~G~v~~wG~n~~Gqlg~-p~-~~~~~i~~ia~G~--~hs~~l-~-~G~v~~wG~n~~Gqlg~ 96 (282)
T 3qhy_B 26 VDAIAGGYF-HGLAL-K-GGKVLGWGANLNGQLTM-PA-ATQSGVDAIAAGN--YHSLAL-K-DGEVIAWGGNEDGQTTV 96 (282)
T ss_dssp CCEEEECSS-EEEEE-E-TTEEEEEECCSSSTTSC-CG-GGGSCCCEEEECS--SEEEEE-E-TTEEEEEECCTTSTTCC
T ss_pred CcEEEeCCC-eEEEE-E-CCEEEEEeCCCCCCCCC-Cc-cCCCCEEEEEeCC--CEEEEE-E-CCEEEEeeCCCCCCCCC
Confidence 445554432 22222 4 89999997653321111 00 1123455555543 233333 3 78888887543211
Q ss_pred ccccccC--------ceEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCce
Q psy8758 81 PLNVHKD--------MTSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS 152 (198)
Q Consensus 81 ~~~~~~~--------~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~ 152 (198)
+...... ...+.-. +|.++.|-....++.-. .......|..++...+... + -. ||.|+.|-......
T Consensus 97 P~~~~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~-~~~~~~~i~~i~~G~~~~~-~-l~-~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 97 PAEARSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTV-PAEAQSGVTALDGGVYTAL-A-VK-NGGVIAWGDNYFGQ 171 (282)
T ss_dssp CGGGSSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSC-CGGGGSSEEEEEECSSEEE-E-EE-TTEEEEEECCTTST
T ss_pred CcccCCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCC-CccCCCCeEEEEcccCEEE-E-EE-CCEEEEecCCCCCC
Confidence 1111111 1122334 89999998665332211 1112344666655433222 2 23 68888886654222
Q ss_pred eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758 153 RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAHAS 193 (198)
Q Consensus 153 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~ 193 (198)
+..- ..-...|..++...+.. ++. .||.|+.|-....
T Consensus 172 lg~p-~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 172 TTVP-AEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRY 208 (282)
T ss_dssp TSCC-GGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTT
T ss_pred CCCc-eecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCC
Confidence 1111 11124566665543322 222 4788888865543
No 379
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=33.98 E-value=1.8e+02 Score=23.16 Aligned_cols=56 Identities=11% Similarity=-0.006 Sum_probs=34.2
Q ss_pred ceEEEecCCCcEEEE-EccCCCcceeee--cCCCcceEEEEEccCC--CEEEEeecCCcEE
Q psy8758 88 MTSAAANEDFNLYSY-DIRQLNSPLNVH--KDMTSAVTSVDYSPTG--REFVAGGYDKSLR 143 (198)
Q Consensus 88 ~~~~~~~~~~~i~~~-d~~~~~~~~~~~--~~~~~~i~~~~~sp~~--~~l~~~~~d~~v~ 143 (198)
.++..|+.+|.|.-. ........+..+ .....+|..|.++++. .+|.+++..+.++
T Consensus 416 tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~ 476 (663)
T 1olz_A 416 DVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQ 476 (663)
T ss_dssp EEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEE
Confidence 367788888887543 333211222222 1234678899999987 8888887665443
No 380
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=33.31 E-value=1.7e+02 Score=22.77 Aligned_cols=68 Identities=7% Similarity=-0.018 Sum_probs=41.4
Q ss_pred ceEEEEEcc----CC--CEEEEeecCCcEE-EEEcCC--C-----ceeeEEecc----------CcccEEEEEEcCCCCE
Q psy8758 120 AVTSVDYSP----TG--REFVAGGYDKSLR-LYLAHQ--G-----HSRDIYHTK----------RMQHVTHTVWSLDNKF 175 (198)
Q Consensus 120 ~i~~~~~sp----~~--~~l~~~~~d~~v~-v~d~~~--~-----~~~~~~~~~----------~~~~v~~~~~s~~~~~ 175 (198)
..+.|+... ++ ..+..|+.+|.|. +..... + ..+..+... ...+|..|.++++...
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 457777764 22 3667888899875 333221 1 111111110 1357889999999999
Q ss_pred EEEecCCCeEEE
Q psy8758 176 VISASDEMNLRV 187 (198)
Q Consensus 176 l~~~~~dg~v~~ 187 (198)
|+.++.++.+++
T Consensus 484 LYV~s~~~V~qV 495 (565)
T 3oky_B 484 LYVAFSTCVIKV 495 (565)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEEecCeEEEe
Confidence 988888877665
No 381
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=32.29 E-value=91 Score=19.67 Aligned_cols=31 Identities=6% Similarity=0.021 Sum_probs=21.3
Q ss_pred cEEEEEEcCCCCEEEEecCCCeEEEEecCCC
Q psy8758 163 HVTHTVWSLDNKFVISASDEMNLRVWKAHAS 193 (198)
Q Consensus 163 ~v~~~~~s~~~~~l~~~~~dg~v~~w~~~~~ 193 (198)
.+.-+.|.|++.+.+.+...|...=.|+..+
T Consensus 111 GlEp~eF~p~~~w~a~~~esG~f~dvDLse~ 141 (164)
T 1zso_A 111 GIELIDFFPSNNFIVEDTKGKLYYDVNLSDQ 141 (164)
T ss_dssp SEEEEEECCCSCEEEEETTSCEEEEECCTTS
T ss_pred CeeeEEEecCCcEEEEECCCCcEEeeecCCC
Confidence 3555789999999998876674434555443
No 382
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=29.43 E-value=2.1e+02 Score=22.71 Aligned_cols=67 Identities=12% Similarity=0.071 Sum_probs=40.1
Q ss_pred eEEEEEc----cCCC---EEEEeecCCcEEEE-EcCCCce-eeEE-eccCcccEEEEEEcCCC--CEEEEecCCCeEEE
Q psy8758 121 VTSVDYS----PTGR---EFVAGGYDKSLRLY-LAHQGHS-RDIY-HTKRMQHVTHTVWSLDN--KFVISASDEMNLRV 187 (198)
Q Consensus 121 i~~~~~s----p~~~---~l~~~~~d~~v~v~-d~~~~~~-~~~~-~~~~~~~v~~~~~s~~~--~~l~~~~~dg~v~~ 187 (198)
.+.|+.. ++++ .+..|..+|.|.-. ....... +... ......+|..|.++++. .+|+.++.++.+++
T Consensus 399 ~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 399 YTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred eEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 4566653 3443 56778888876433 3333222 1111 11234688899999987 88888887765554
No 383
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=28.77 E-value=1.4e+02 Score=20.43 Aligned_cols=156 Identities=4% Similarity=-0.060 Sum_probs=77.9
Q ss_pred CCceEEEeeCCCeEEEEEccCCc---eeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCCccccccCc
Q psy8758 12 DNKFVISASDEMNLRVWKAHASE---KLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNSPLNVHKDM 88 (198)
Q Consensus 12 ~~~~l~~~~~d~~i~i~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~~~~~~~~~ 88 (198)
+...++..+.+|.++...+..-. .-...........+..+........++.. +..|.+..+........-.
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~-T~~G~~~r~~~~eip~~gR----- 152 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLF-TKKGRVARFSVREVPPSTP----- 152 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEE-ETTSEEEEEEGGGSCBCCT-----
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEE-ECCCEEEEEEhhhCCCcCC-----
Confidence 45688889999999988875432 00001111123444444444444455543 4667766665543211000
Q ss_pred eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCc-------eeeEEeccCc
Q psy8758 89 TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGH-------SRDIYHTKRM 161 (198)
Q Consensus 89 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~-------~~~~~~~~~~ 161 (198)
... +.....+.. ...+..+...+++..++..+..|.++...+..-. -...+ ...
T Consensus 153 ------~a~----------Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i--~~~ 213 (276)
T 3no0_A 153 ------GAR----------GVQGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS--GTK 213 (276)
T ss_dssp ------TCC----------CEECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC--CSS
T ss_pred ------CCC----------CEEEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE--cCC
Confidence 000 111111221 2344455444556688888889988888775421 11112 122
Q ss_pred ccEEEEEEcCCCCEEEEecCCCeEEE--EecCC
Q psy8758 162 QHVTHTVWSLDNKFVISASDEMNLRV--WKAHA 192 (198)
Q Consensus 162 ~~v~~~~~s~~~~~l~~~~~dg~v~~--w~~~~ 192 (198)
+.+..+....+...++..+.+|.+.. ++...
T Consensus 214 ~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 214 DTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp SCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred CcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 34544433333345555667777777 76543
No 384
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=27.53 E-value=1.7e+02 Score=20.90 Aligned_cols=48 Identities=8% Similarity=0.038 Sum_probs=25.0
Q ss_pred eEEEeeCCCeEEEEEccC-CceeeeeeeeeecCceeeEEeCC-CCCeEEEE
Q psy8758 15 FVISASDEMNLRVWKAHA-SEKLGPIRKVVMSLRSNMVSWNP-MEAFVFTA 63 (198)
Q Consensus 15 ~l~~~~~d~~i~i~~~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~ 63 (198)
.|.+|+..| +.+++... ++....+........+.++++.| +...++++
T Consensus 24 ~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g 73 (394)
T 3b7f_A 24 MLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMA 73 (394)
T ss_dssp EEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEE
T ss_pred EEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEE
Confidence 566777766 55555432 22222222112345688999998 23344443
No 385
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=27.26 E-value=2.2e+02 Score=22.16 Aligned_cols=27 Identities=0% Similarity=0.035 Sum_probs=21.9
Q ss_pred CcceEEEEEccCCCEEEEeecCCcEEE
Q psy8758 118 TSAVTSVDYSPTGREFVAGGYDKSLRL 144 (198)
Q Consensus 118 ~~~i~~~~~sp~~~~l~~~~~d~~v~v 144 (198)
..+|..|.++++...|.+++.++.+++
T Consensus 469 ~~pI~~L~ls~~~~~LYV~s~~~V~qV 495 (565)
T 3oky_B 469 DKRIMGMQLDRASGSLYVAFSTCVIKV 495 (565)
T ss_dssp CCCCCEEEEEGGGTEEEEECSSCEEEE
T ss_pred CCceEEEEEcCCCCEEEEEecCeEEEe
Confidence 457889999999999999888776554
No 386
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=27.26 E-value=18 Score=26.83 Aligned_cols=19 Identities=32% Similarity=0.543 Sum_probs=13.1
Q ss_pred EecCCCeEEEEecCCCccc
Q psy8758 178 SASDEMNLRVWKAHASEKL 196 (198)
Q Consensus 178 ~~~~dg~v~~w~~~~~~~~ 196 (198)
.+..+|.|++||+++.+++
T Consensus 162 ~~~~~GVVrvWDVkd~slL 180 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAELL 180 (577)
T ss_dssp ----CCEECSEECSCGGGG
T ss_pred CCCCCCeEEEEecCCHHHH
Confidence 4567999999999987764
No 387
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=26.67 E-value=1.9e+02 Score=23.09 Aligned_cols=56 Identities=14% Similarity=0.166 Sum_probs=34.6
Q ss_pred EEEEeecCCcEEEEEcCCC----ceeeEEec-cCcccE-EEEEEcCCCCEEEEecCCCeEEE
Q psy8758 132 EFVAGGYDKSLRLYLAHQG----HSRDIYHT-KRMQHV-THTVWSLDNKFVISASDEMNLRV 187 (198)
Q Consensus 132 ~l~~~~~d~~v~v~d~~~~----~~~~~~~~-~~~~~v-~~~~~s~~~~~l~~~~~dg~v~~ 187 (198)
.+..|..+|.|.-.-+... .....+.. ....+| ..|.++++...|+.++.++.+++
T Consensus 414 VlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 414 VVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp EEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 5667888888765444331 12222211 134566 68999999888888877765554
No 388
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=26.41 E-value=1.8e+02 Score=23.29 Aligned_cols=57 Identities=7% Similarity=-0.062 Sum_probs=35.1
Q ss_pred ceEEEecCCCcEEEEEccCCC---cceeee--cCCCcce-EEEEEccCCCEEEEeecCCcEEE
Q psy8758 88 MTSAAANEDFNLYSYDIRQLN---SPLNVH--KDMTSAV-TSVDYSPTGREFVAGGYDKSLRL 144 (198)
Q Consensus 88 ~~~~~~~~~~~i~~~d~~~~~---~~~~~~--~~~~~~i-~~~~~sp~~~~l~~~~~d~~v~v 144 (198)
.++..|+.+|.|.-.-+.... ..+..+ .....+| ..|.++++...|..++..+.+++
T Consensus 413 tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 413 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp EEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 357888999988755443211 122222 1234566 68999998888888776654443
No 389
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=25.49 E-value=2.3e+02 Score=21.80 Aligned_cols=57 Identities=12% Similarity=0.078 Sum_probs=36.2
Q ss_pred ceEEEecCCCcEEEEEcc-C-CCcceeeec-CCCcce-EEEEEccCCCEEEEeecCCcEEE
Q psy8758 88 MTSAAANEDFNLYSYDIR-Q-LNSPLNVHK-DMTSAV-TSVDYSPTGREFVAGGYDKSLRL 144 (198)
Q Consensus 88 ~~~~~~~~~~~i~~~d~~-~-~~~~~~~~~-~~~~~i-~~~~~sp~~~~l~~~~~d~~v~v 144 (198)
.++..|+.+|.|.-.-+. . ....+..+. ....+| ..|.++++...|..++..+.+++
T Consensus 401 tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 401 TIAFLGDSQGQLHRVYLGPGSDGHPYSTQSIQQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp EEEEEEETTSEEEEEECSSSCCSCCSEEEESSTTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCeeEEeeeccCCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 457788899988754443 1 112222222 234567 48999999999998887775554
No 390
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=24.99 E-value=1e+02 Score=17.58 Aligned_cols=15 Identities=13% Similarity=0.231 Sum_probs=9.3
Q ss_pred EEEEEccCCCEEEEe
Q psy8758 122 TSVDYSPTGREFVAG 136 (198)
Q Consensus 122 ~~~~~sp~~~~l~~~ 136 (198)
..+.+-+||.+.+..
T Consensus 87 ~~l~Lq~dGNlvly~ 101 (111)
T 3mez_A 87 YAATLGPDQHVTIYG 101 (111)
T ss_dssp CEEEECTTSCEEEEC
T ss_pred EEEEECCCCeEEEec
Confidence 455666777766654
No 391
>3ge2_A Lipoprotein, putative; beta-barrel, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.20A {Streptococcus pneumoniae}
Probab=24.02 E-value=1.2e+02 Score=18.01 Aligned_cols=31 Identities=13% Similarity=0.328 Sum_probs=21.0
Q ss_pred ccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758 158 TKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 158 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
......+..+.|.|.++.|..|. | ++.|.++
T Consensus 79 ~DGdqEikqV~iD~~NQ~m~IGD-D--vk~Y~ln 109 (130)
T 3ge2_A 79 SDGDQKVKQVTFDSANQRMIIGD-D--VKIYTVN 109 (130)
T ss_dssp TTSCEEEEEEEEETTTTEEEETT-E--EEEEEEE
T ss_pred cCCCeeeEEEEEccCcCEEEecC-c--ceEEEec
Confidence 34446788999999999887664 2 4455443
No 392
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=23.76 E-value=1.1e+02 Score=17.31 Aligned_cols=14 Identities=14% Similarity=0.221 Sum_probs=8.2
Q ss_pred EEEEccCCCEEEEe
Q psy8758 123 SVDYSPTGREFVAG 136 (198)
Q Consensus 123 ~~~~sp~~~~l~~~ 136 (198)
.+.+-++|.+++.+
T Consensus 86 ~l~L~ddGNlVly~ 99 (105)
T 4h3o_A 86 ILILQDDGNVIIYG 99 (105)
T ss_dssp EEEECTTSCEEEEE
T ss_pred EEEEeCCCeEEEEC
Confidence 35566667666553
No 393
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=21.63 E-value=2e+02 Score=19.64 Aligned_cols=155 Identities=8% Similarity=0.080 Sum_probs=75.5
Q ss_pred CCeEEEEEccCC-ceeeeeeeeeecCceeeEEeCCCCCeEEEEecCCccEEEEeccCCCC---ccccccC---------c
Q psy8758 22 EMNLRVWKAHAS-EKLGPIRKVVMSLRSNMVSWNPMEAFVFTAANEDFNLYSYDIRQLNS---PLNVHKD---------M 88 (198)
Q Consensus 22 d~~i~i~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~~d~~~~~~---~~~~~~~---------~ 88 (198)
||.+..|-.... +.-.+.. ....|..++... .+.++. . ++.++.|-....-+ +.....+ .
T Consensus 80 ~G~v~~wG~n~~Gqlg~P~~---~~~~v~~ia~G~--~hs~al-~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~ 152 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTVPAE---ARSGVDAIAAGA--WASYAL-K-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT 152 (282)
T ss_dssp TTEEEEEECCTTSTTCCCGG---GSSSEEEEEEET--TEEEEE-E-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE
T ss_pred CCEEEEeeCCCCCCCCCCcc---cCCCeEEEECcC--CEEEEE-e-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE
Confidence 888888876532 2111111 123455555443 233332 4 88899887643211 1111111 1
Q ss_pred eEEEecCCCcEEEEEccCCCcceeeecCCCcceEEEEEccCCCEEEEeecCCcEEEEEcCCCceeeEEeccCcccEEEEE
Q psy8758 89 TSAAANEDFNLYSYDIRQLNSPLNVHKDMTSAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHSRDIYHTKRMQHVTHTV 168 (198)
Q Consensus 89 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~~~~~~~~~~~~v~~~~ 168 (198)
.++ -. ++.++.|-....++.-. -......|..++...+.. ++. .||.|+.|=......+..- ......|..++
T Consensus 153 ~~~-l~-~G~v~~wG~n~~gqlg~-p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gqlg~p-~~~~~~v~~i~ 225 (282)
T 3qhy_B 153 ALA-VK-NGGVIAWGDNYFGQTTV-PAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQTTVP-TEALSGVSAIA 225 (282)
T ss_dssp EEE-EE-TTEEEEEECCTTSTTSC-CGGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTTCCC-GGGGSSCCEEE
T ss_pred EEE-EE-CCEEEEecCCCCCCCCC-ceecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCCCCC-cccCCCceEEE
Confidence 122 23 78899997765332211 111234566776654332 333 5899999976543222111 11123466665
Q ss_pred EcCCCCEEEEecCCCeEEEEecCCC
Q psy8758 169 WSLDNKFVISASDEMNLRVWKAHAS 193 (198)
Q Consensus 169 ~s~~~~~l~~~~~dg~v~~w~~~~~ 193 (198)
...+...++ . ||.|+.|-....
T Consensus 226 ~G~~h~~al--~-~g~v~~wG~n~~ 247 (282)
T 3qhy_B 226 SGEWYSLAL--K-NGKVIAWGSSRT 247 (282)
T ss_dssp ECSSCEEEE--E-TTEEEEESTTCC
T ss_pred cCCCEEEEE--E-CCEEEEecCCCC
Confidence 544333332 3 888888866543
No 394
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=20.88 E-value=2.1e+02 Score=19.59 Aligned_cols=73 Identities=4% Similarity=-0.032 Sum_probs=40.7
Q ss_pred cceEEEEEccCCCEEEEeecCCcEEEEEcCCCce-------eeEEeccCcccEEEEEEcCCCCEEEEecCCCeEEEEecC
Q psy8758 119 SAVTSVDYSPTGREFVAGGYDKSLRLYLAHQGHS-------RDIYHTKRMQHVTHTVWSLDNKFVISASDEMNLRVWKAH 191 (198)
Q Consensus 119 ~~i~~~~~sp~~~~l~~~~~d~~v~v~d~~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~~w~~~ 191 (198)
+.+..+........++..+..|.+..++...-.. ...+.-.....|.++...+++..++..+..|.++...+.
T Consensus 116 D~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 116 DEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp CCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred CEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 3444444444555677777788777776543111 111111223456665555556677777788887777654
Done!