BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy876
(179 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|405960555|gb|EKC26471.1| Fanconi anemia group J protein [Crassostrea gigas]
Length = 1410
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 76/120 (63%), Gaps = 12/120 (10%)
Query: 54 VVSQGPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTL 113
V ++ P+ D+ S R + + TL+FWC+N G+ FSD+ RSV+LTSGTL
Sbjct: 501 VYTRNPNTDDMWLNSKRRRGGQSMIPTTQLTLNFWCMNPGVAFSDL-SVCRSVVLTSGTL 559
Query: 114 APVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
+P++SF+SELG FPIKLEANHVI+ Q V++G +GQGP+ L+A+Y++
Sbjct: 560 SPINSFESELGVPFPIKLEANHVIEDKQ-----------VWVGAVGQGPRGGTLEAVYRS 608
>gi|148232300|ref|NP_001083272.1| BRCA1 interacting protein C-terminal helicase 1 [Xenopus laevis]
gi|37747678|gb|AAH60014.1| MGC68622 protein [Xenopus laevis]
Length = 713
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 66/91 (72%), Gaps = 5/91 (5%)
Query: 67 ESNRWYRKDRTPMSIK-----YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQS 121
+ N ++ + R+ SI+ YTL+FWCLN + FSD+ +AR+++LTSGTL+P+ SF S
Sbjct: 571 DENGFFARPRSRRSIRQKIMVYTLNFWCLNPAVAFSDLSSNARTIVLTSGTLSPMGSFSS 630
Query: 122 ELGTQFPIKLEANHVIDKDQVFIGVLGQGQK 152
ELG +F I+LEANHVI K QV++G +G G K
Sbjct: 631 ELGVKFSIQLEANHVIHKSQVWVGTVGAGPK 661
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKET-EGESNRWY 41
MTILSSR+HTC++ ++ N N+ C+EL E +G S R+Y
Sbjct: 280 MTILSSREHTCVHPDI---HSNRNERCKELLEAKDGHSCRFY 318
>gi|47204868|emb|CAF94395.1| unnamed protein product [Tetraodon nigroviridis]
Length = 529
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%), Gaps = 3/95 (3%)
Query: 59 PHADEYQGESNRWYRKDRTPMSIK---YTLHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
P A + QG R +++ R + +K T+ FWCLN + FSD+ ++ RS++LTSGTL+P
Sbjct: 388 PDAPDAQGFFGRPHQRQRRSIRVKSEVLTVSFWCLNPAVAFSDLGDAVRSIVLTSGTLSP 447
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
+ SF SELG +F I+LEANHVI+K QV++G +G G
Sbjct: 448 MASFSSELGVKFSIQLEANHVINKSQVWVGTVGAG 482
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQE-LKETEGESNRWY 41
MTILSSR HTC+N EV + N+LC+E L+ +G S +Y
Sbjct: 56 MTILSSRDHTCVNPEVAPHSKR-NELCKERLEAKDGRSCHYY 96
>gi|47224934|emb|CAG06504.1| unnamed protein product [Tetraodon nigroviridis]
Length = 862
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%), Gaps = 3/95 (3%)
Query: 59 PHADEYQGESNRWYRKDRTPMSIK---YTLHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
P A + QG R +++ R + +K T+ FWCLN + FSD+ ++ RS++LTSGTL+P
Sbjct: 561 PDAPDAQGFFGRPHQRQRRSIRVKSEVLTVSFWCLNPAVAFSDLGDAVRSIVLTSGTLSP 620
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
+ SF SELG +F I+LEANHVI+K QV++G +G G
Sbjct: 621 MASFSSELGVKFSIQLEANHVINKSQVWVGTVGAG 655
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQE-LKETEGESNRWY 41
MTILSSR HTC+N EV + N+LC+E L+ +G S +Y
Sbjct: 260 MTILSSRDHTCVNPEVAPHSKR-NELCKERLEAKDGRSCHYY 300
>gi|47214240|emb|CAG12459.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 67/95 (70%), Gaps = 3/95 (3%)
Query: 59 PHADEYQGESNRWYRKDRTPMSIK---YTLHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
P A + QG R +++ R + +K T+ FWCLN + FSD+ ++ RS++LTSGTL+P
Sbjct: 62 PDAPDAQGFFGRPHQRQRRSIRVKSEVLTVSFWCLNPAVAFSDLGDAVRSIVLTSGTLSP 121
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
+ SF SELG +F I+LEANHVI+K QV++G +G G
Sbjct: 122 MASFSSELGVKFSIQLEANHVINKSQVWVGTVGAG 156
>gi|160333450|ref|NP_001103766.1| BRCA1 interacting protein C-terminal helicase 1 [Danio rerio]
gi|126843119|gb|ABO27623.1| Fanconi anemia J [Danio rerio]
Length = 1217
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 59 PHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDS 118
P A + +R + +RT ++ +TL FWCLN + FSD+ + RS++LTSGTL+P+ S
Sbjct: 593 PDAQGFFARPHRRRQSNRT-KTLVHTLSFWCLNPAVAFSDLSSTVRSIVLTSGTLSPMGS 651
Query: 119 FQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
F SELG +F I+LEANHVI+K QV++G +G G
Sbjct: 652 FSSELGIKFSIQLEANHVINKSQVWVGTIGAG 683
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETE-GESNRWY 41
MTILSSR HTC++ EV+ N N+ C+E E + G S R+Y
Sbjct: 301 MTILSSRDHTCVHPEVV-PHANRNERCKEFLEAKNGRSCRYY 341
>gi|301608630|ref|XP_002933884.1| PREDICTED: Fanconi anemia group J protein-like [Xenopus (Silurana)
tropicalis]
Length = 1229
Score = 98.6 bits (244), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/70 (60%), Positives = 56/70 (80%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
YTL+FWCLN + FSD+ +AR+++LTSGTL+P+ SF SELG +F I+LEANHVI K QV
Sbjct: 592 YTLNFWCLNPAVAFSDLSSNARTIVLTSGTLSPMGSFSSELGVKFSIQLEANHVIHKSQV 651
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 652 WVGTVGAGPK 661
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 4/42 (9%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKET-EGESNRWY 41
MTILSSR+HTC++ ++ N N+ C+EL E +G S R+Y
Sbjct: 280 MTILSSREHTCVHPDI---HSNRNEKCKELLEAKDGHSCRFY 318
>gi|410928893|ref|XP_003977834.1| PREDICTED: Fanconi anemia group J protein homolog [Takifugu
rubripes]
Length = 1109
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
Query: 59 PHADEYQGESNRWYRKDRTPMSIK---YTLHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
P A + QG R ++ R + +K TL FWCLN + FSD+ S +S++LTSGTL+P
Sbjct: 527 PDAPDAQGFFVRPRQRQRQSIRVKAEMLTLSFWCLNPAVAFSDLSNSLKSIVLTSGTLSP 586
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
+ SF SELG +F I+LEANHVI+K QV++G +G G
Sbjct: 587 MGSFSSELGVKFSIQLEANHVINKSQVWVGTVGAG 621
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQE-LKETEGESNRWY 41
MTILSSR HTC+N EV + N+LC+E L+ +G S R+Y
Sbjct: 236 MTILSSRDHTCVNPEVAPHSKR-NELCKERLEAKDGRSCRYY 276
>gi|301094332|ref|XP_002896272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109667|gb|EEY67719.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 988
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 58/86 (67%), Gaps = 10/86 (11%)
Query: 88 WCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVL 147
WCLN+ + FSDI ARSVILTSGTL+P++SF ELG FPI+LEANHV++
Sbjct: 595 WCLNAAVAFSDIASQARSVILTSGTLSPMESFAGELGVDFPIRLEANHVVN--------- 645
Query: 148 GQGQKVFIGVLGQGPQNIPLQALYKN 173
++VFIG + GP N+ LQ+ Y N
Sbjct: 646 -MRKQVFIGAVMHGPGNVDLQSTYNN 670
>gi|348687642|gb|EGZ27456.1| hypothetical protein PHYSODRAFT_554000 [Phytophthora sojae]
Length = 1025
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 58/87 (66%), Gaps = 10/87 (11%)
Query: 87 FWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGV 146
WCLN+ + FSDI ARSVILTSGTL+P++SF ELG FPI+LEANHV++
Sbjct: 628 IWCLNAAVAFSDIASQARSVILTSGTLSPMESFAGELGVDFPIRLEANHVVN-------- 679
Query: 147 LGQGQKVFIGVLGQGPQNIPLQALYKN 173
++VFIG + GP N+ LQ+ Y N
Sbjct: 680 --MRKQVFIGAVMHGPGNVDLQSTYNN 704
>gi|348532245|ref|XP_003453617.1| PREDICTED: Fanconi anemia group J protein [Oreochromis niloticus]
Length = 1236
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 60/91 (65%), Gaps = 11/91 (12%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
TL FWCLN + FSD+ S S++LTSGTL+P+DSF SELG +F I+LEANHVI+K Q
Sbjct: 606 TLSFWCLNPAVAFSDLSGSVHSIVLTSGTLSPMDSFSSELGVKFSIQLEANHVINKSQ-- 663
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
V++G +G GPQ L A ++N
Sbjct: 664 ---------VWVGTVGAGPQGRKLCATFQNA 685
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKET-EGESNRWY 41
MTILSSR HTC+N +V+ N N+ C++L E +G S R+Y
Sbjct: 288 MTILSSRDHTCVNPDVV-PHTNRNERCKDLLEAKDGRSCRYY 328
>gi|260808249|ref|XP_002598920.1| hypothetical protein BRAFLDRAFT_79851 [Branchiostoma floridae]
gi|229284195|gb|EEN54932.1| hypothetical protein BRAFLDRAFT_79851 [Branchiostoma floridae]
Length = 1352
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 64/95 (67%), Gaps = 12/95 (12%)
Query: 80 SIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDK 139
+ + LHFWCLN + FS++ + R+++L+SGTL+P+DSFQSELG FPI+LEANHV+ K
Sbjct: 551 TFSHQLHFWCLNPAVAFSEL-ANCRAIVLSSGTLSPIDSFQSELGVPFPIQLEANHVVGK 609
Query: 140 DQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
Q V++G +G GP+ L A Y++T
Sbjct: 610 KQ-----------VWVGTVGAGPRGRKLMATYQHT 633
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%), Gaps = 3/30 (10%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQEL 30
MTILSSR+HTCIN + + N ND C+EL
Sbjct: 254 MTILSSREHTCINASI---RGNKNDGCREL 280
>gi|390345521|ref|XP_781875.3| PREDICTED: Fanconi anemia group J protein-like [Strongylocentrotus
purpuratus]
Length = 1704
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 67/115 (58%), Gaps = 13/115 (11%)
Query: 62 DEYQGESNRWYRKDRTPMSIKYTL--HFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+++ +N W ++ R +TL +FWCLN + F+D E+ R++ILTSGTL+P+ SF
Sbjct: 624 NQFPNTNNTWIQRRRRSAEAVFTLSLNFWCLNPAVAFTDFGEAVRTIILTSGTLSPMSSF 683
Query: 120 QSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
SELG FPI+LEANHVI+K Q V++ GP L A Y+N
Sbjct: 684 ASELGVSFPIQLEANHVINKSQ-----------VWVSTWAFGPNGHSLNATYRNA 727
>gi|432894997|ref|XP_004076035.1| PREDICTED: Fanconi anemia group J protein homolog [Oryzias latipes]
Length = 1273
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 61/91 (67%), Gaps = 11/91 (12%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
TL FWCLN + FSD+ S RS++LTSGTL+P+ SF SELG +F I+LEANHVI+K Q
Sbjct: 656 TLSFWCLNPAVAFSDLSGSVRSIVLTSGTLSPMGSFSSELGVKFSIQLEANHVINKSQ-- 713
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
V++G +G GPQ L A +++T
Sbjct: 714 ---------VWVGTVGAGPQGKKLCATFQHT 735
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETE-GESNRWY 41
MTILSSR HTC+N EV+ N N+ C++L E + G+S R+Y
Sbjct: 337 MTILSSRDHTCVNPEVV-PHFNRNERCKDLLEAKNGKSCRFY 377
>gi|198429884|ref|XP_002120239.1| PREDICTED: similar to BRIP1 [Ciona intestinalis]
Length = 1145
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 58/90 (64%), Gaps = 12/90 (13%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
LHFWCLN + F+D+ ++ R +ILTSGTL+P+ SF SELG FPI+LEA HVI Q
Sbjct: 448 LHFWCLNPAVAFTDLADT-RCIILTSGTLSPMSSFSSELGLAFPIQLEAAHVISNSQ--- 503
Query: 145 GVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
VF+G LG GP LQA Y+NT
Sbjct: 504 --------VFVGSLGCGPNGHRLQATYQNT 525
>gi|320165278|gb|EFW42177.1| DNA repair helicase [Capsaspora owczarzaki ATCC 30864]
Length = 1329
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 52/79 (65%), Gaps = 2/79 (2%)
Query: 72 YRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKL 131
Y ++ P I L WCLNS L FSD RE RSVILTSGTL+P++SF SELGT FP+ L
Sbjct: 824 YEEEDAP--ITTALEIWCLNSALCFSDFREGVRSVILTSGTLSPMNSFASELGTAFPVVL 881
Query: 132 EANHVIDKDQVFIGVLGQG 150
E HVI D F+ L +G
Sbjct: 882 EGAHVIPPDHTFVRCLSRG 900
>gi|255539256|ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
communis]
gi|223551394|gb|EEF52880.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
communis]
Length = 1248
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 68/117 (58%), Gaps = 12/117 (10%)
Query: 58 GPHADEYQGESNRWYRKDR-TPM-SIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
G H +YQ R ++DR +P+ TL WCLN +VF DI + + SVILTSGTL+P
Sbjct: 430 GCHVSDYQLALQRHIKRDRKSPVGEWTLTLSLWCLNPAVVFRDIADLSLSVILTSGTLSP 489
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
++SF SELG QF LEA HVID + +V+ V+ GP N PL A YK
Sbjct: 490 MNSFSSELGVQFGTCLEAPHVIDNE----------SQVWAAVISTGPDNYPLNASYK 536
>gi|348567428|ref|XP_003469501.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein-like
[Cavia porcellus]
Length = 1209
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Query: 73 RKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLE 132
++ R +++ + L+FWCLN + FSDI R+++LTSGTL+P++SF SELG F I+LE
Sbjct: 577 KRSRQKIAV-HVLNFWCLNPAVAFSDINGRVRTIVLTSGTLSPMNSFSSELGVTFTIQLE 635
Query: 133 ANHVIDKDQVFIGVLGQGQK 152
ANHVI+ QV++G +G G K
Sbjct: 636 ANHVINNSQVWVGTIGSGPK 655
>gi|334322387|ref|XP_001363088.2| PREDICTED: Fanconi anemia group J protein [Monodelphis domestica]
Length = 1179
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
Query: 73 RKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLE 132
++ R M++ + L+FWCLN + F DI R+++LTSGTL+P++SF SELG F I+LE
Sbjct: 527 KRSRQKMAV-HVLNFWCLNPAVAFLDISSKVRTIVLTSGTLSPMNSFSSELGVTFAIQLE 585
Query: 133 ANHVIDKDQVFIGVLGQGQK 152
ANHVI QV++G +G G K
Sbjct: 586 ANHVIQNSQVWVGTIGSGPK 605
>gi|30795235|ref|NP_840094.1| Fanconi anemia group J protein homolog [Mus musculus]
gi|78099253|sp|Q5SXJ3.1|FANCJ_MOUSE RecName: Full=Fanconi anemia group J protein homolog; Short=Protein
FACJ; AltName: Full=ATP-dependent RNA helicase BRIP1;
AltName: Full=BRCA1-associated C-terminal helicase 1;
AltName: Full=BRCA1-interacting protein C-terminal
helicase 1; Short=BRCA1-interacting protein 1
gi|62740250|gb|AAH94252.1| BRCA1 interacting protein C-terminal helicase 1 [Mus musculus]
Length = 1174
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L+FWCLN + FSDI + R+++LTSGTL+P+ SF SELG F I+LEANHVI QV+
Sbjct: 591 ALNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVISNSQVW 650
Query: 144 IGVLGQGQK 152
+G +G G K
Sbjct: 651 VGTVGSGPK 659
>gi|148683833|gb|EDL15780.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_b [Mus
musculus]
Length = 1180
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L+FWCLN + FSDI + R+++LTSGTL+P+ SF SELG F I+LEANHVI QV+
Sbjct: 597 ALNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVISNSQVW 656
Query: 144 IGVLGQGQK 152
+G +G G K
Sbjct: 657 VGTVGSGPK 665
>gi|351703518|gb|EHB06437.1| Fanconi anemia group J protein [Heterocephalus glaber]
Length = 836
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI R+++LTSGTL+P+ SF SELG F I+LEANHVI+ QV
Sbjct: 257 HVLNFWCLNPAVAFSDINGKVRTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQV 316
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 317 WVGTIGSGPK 326
>gi|148683832|gb|EDL15779.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a [Mus
musculus]
Length = 901
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L+FWCLN + FSDI + R+++LTSGTL+P+ SF SELG F I+LEANHVI QV+
Sbjct: 325 ALNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVISNSQVW 384
Query: 144 IGVLGQGQK 152
+G +G G K
Sbjct: 385 VGTVGSGPK 393
>gi|109488700|ref|XP_340870.3| PREDICTED: Fanconi anemia group J protein homolog [Rattus
norvegicus]
gi|109491562|ref|XP_001081096.1| PREDICTED: Fanconi anemia group J protein homolog [Rattus
norvegicus]
Length = 1166
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 51/68 (75%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+FWCLN + FSDI + R+++LTSGTL+P+ SF SELG F I+LEANHVI QV++
Sbjct: 586 LNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFNIQLEANHVISNSQVWV 645
Query: 145 GVLGQGQK 152
G +G G K
Sbjct: 646 GTVGSGPK 653
>gi|74146859|dbj|BAE41393.1| unnamed protein product [Mus musculus]
Length = 824
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L+FWCLN + FSDI + R+++LTSGTL+P+ SF SELG F I+LEANHVI QV+
Sbjct: 517 ALNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVISNSQVW 576
Query: 144 IGVLGQGQK 152
+G +G G K
Sbjct: 577 VGTVGSGPK 585
>gi|344285337|ref|XP_003414418.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein-like
[Loxodonta africana]
Length = 1240
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 52/68 (76%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI E ++++LTSGTL+P+ SF SELG F I+LEANHVI+ QV
Sbjct: 572 HVLNFWCLNPAVAFSDIDEKVQTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQV 631
Query: 143 FIGVLGQG 150
++G +G G
Sbjct: 632 WVGTIGSG 639
>gi|74138560|dbj|BAE41179.1| unnamed protein product [Mus musculus]
gi|74216986|dbj|BAE26603.1| unnamed protein product [Mus musculus]
Length = 898
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/69 (56%), Positives = 51/69 (73%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L+FWCLN + FSDI + R+++LTSGTL+P+ SF SELG F I+LEANHVI QV+
Sbjct: 591 ALNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVISNSQVW 650
Query: 144 IGVLGQGQK 152
+G +G G K
Sbjct: 651 VGTVGSGPK 659
>gi|395845987|ref|XP_003795698.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Otolemur garnettii]
Length = 1234
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI R+++LTSGTL+P+ SF SELG F I+LEANHVI QV
Sbjct: 587 HVLNFWCLNPAVAFSDINGKVRTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVIKNSQV 646
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 647 WVGTIGSGPK 656
>gi|149053741|gb|EDM05558.1| BRCA1 interacting protein C-terminal helicase 1 (predicted) [Rattus
norvegicus]
Length = 964
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 51/68 (75%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+FWCLN + FSDI + R+++LTSGTL+P+ SF SELG F I+LEANHVI QV++
Sbjct: 586 LNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFNIQLEANHVISNSQVWV 645
Query: 145 GVLGQGQK 152
G +G G K
Sbjct: 646 GTVGSGPK 653
>gi|308806570|ref|XP_003080596.1| putative BRCA1 interacting protein C-terminal helicase 1 (ISS)
[Ostreococcus tauri]
gi|116059057|emb|CAL54764.1| putative BRCA1 interacting protein C-terminal helicase 1 (ISS)
[Ostreococcus tauri]
Length = 1045
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 63/100 (63%), Gaps = 12/100 (12%)
Query: 76 RTPMSIKYTLHFWCLNSGLVFSDI--RESARSVILTSGTLAPVDSFQSELGTQFPIKLEA 133
R P+ ++FW LN L F D+ + ARSVILTSGTLAP++SF SELG +FPI+LEA
Sbjct: 466 RLPIDEVVKINFWALNPALAFRDLVGEDGARSVILTSGTLAPLNSFASELGVEFPIRLEA 525
Query: 134 NHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
H ID ++V+ V+G GP N+P+ A +K+
Sbjct: 526 QHCID----------MKRQVYGSVVGIGPNNVPMNAGFKS 555
>gi|403274761|ref|XP_003929130.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Saimiri boliviensis boliviensis]
Length = 1252
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI R+++LTSGTL+P+ SF SELG F I+LEANHVI QV
Sbjct: 587 HVLNFWCLNPAVAFSDINGKVRTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVIKNSQV 646
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 647 WVGTIGSGPK 656
>gi|224076637|ref|XP_002196566.1| PREDICTED: Fanconi anemia group J protein homolog [Taeniopygia
guttata]
Length = 1249
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
Query: 72 YRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKL 131
++K ++ + L+FWCLN + FSD+ E R+++LTSGTL+P+DSF SELG +F I+L
Sbjct: 589 HKKSSRQKTLVHMLNFWCLNPAVAFSDLNE-VRTIVLTSGTLSPMDSFSSELGVKFSIQL 647
Query: 132 EANHVIDKDQVFIGVLGQG 150
EANHVI QV++G +G G
Sbjct: 648 EANHVIQNSQVWVGTVGVG 666
>gi|443682315|gb|ELT86966.1| hypothetical protein CAPTEDRAFT_219962 [Capitella teleta]
Length = 1021
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 50/68 (73%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+FWCLN + F + ARSVILTSGTL+P+ SFQSELG FPI+LEANHVI QV++
Sbjct: 393 LNFWCLNPAVAFGSMGLDARSVILTSGTLSPMTSFQSELGASFPIQLEANHVISPSQVWV 452
Query: 145 GVLGQGQK 152
G + G K
Sbjct: 453 GTISHGPK 460
>gi|296201899|ref|XP_002806878.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Callithrix jacchus]
Length = 1252
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 51/70 (72%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI R+++LTSGTL+P+ SF SELG F I+LEANHVI QV
Sbjct: 587 HVLNFWCLNPAVAFSDINGKVRTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVIKNSQV 646
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 647 WVGTVGSGPK 656
>gi|74271901|ref|NP_001028230.1| Fanconi anemia group J protein homolog [Gallus gallus]
gi|78099252|sp|Q3YK19.1|FANCJ_CHICK RecName: Full=Fanconi anemia group J protein homolog; Short=Protein
FACJ; AltName: Full=ATP-dependent RNA helicase BRIP1
gi|72199300|gb|AAZ66861.1| BRIP1 [Gallus gallus]
Length = 1252
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/79 (49%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 72 YRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKL 131
++++ ++ + L+FWCLN + FSD+ + R+V+LTSGTL+P+DSF SELG +F I+L
Sbjct: 587 HKRNLRHKTVVHMLNFWCLNPAVAFSDLND-VRTVVLTSGTLSPMDSFSSELGVKFSIQL 645
Query: 132 EANHVIDKDQVFIGVLGQG 150
EANHVI QV++G +G G
Sbjct: 646 EANHVIRNSQVWVGTIGTG 664
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKE-TEGESNRWY 41
MTILSSR +TCI+ V + N N+LC EL E G+S +Y
Sbjct: 282 MTILSSRDYTCIHPVVSSSNSNRNELCVELLEGKHGKSCLYY 323
>gi|348682926|gb|EGZ22742.1| hypothetical protein PHYSODRAFT_330481 [Phytophthora sojae]
Length = 873
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 61/99 (61%), Gaps = 10/99 (10%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEAN 134
D+ I TL WCL++ +VFS + A SVIL SGTL+P+DSF ELG FPI+LE+N
Sbjct: 496 DKNEEVIDTTLCIWCLSAAVVFSSLALQAHSVILASGTLSPMDSFAGELGVDFPIRLESN 555
Query: 135 HVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
HV++ ++VFIG + GP N+ L + YKN
Sbjct: 556 HVVN----------MRKQVFIGAIMNGPGNVDLISTYKN 584
>gi|449519585|ref|XP_004166815.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
homolog [Cucumis sativus]
Length = 1041
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 67/117 (57%), Gaps = 12/117 (10%)
Query: 58 GPHADEYQGESNRWYRKDRTPMSIKYT--LHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
G H +YQ R+ ++D K+T L WCLN +VF DI + + SVILTSGTL+P
Sbjct: 441 GCHMSDYQLALQRYTKRDPEKACAKWTVTLSLWCLNPAVVFRDIGDLSLSVILTSGTLSP 500
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
++SF SELG +F LEA HVID + +V+ ++ GP N PL A YK
Sbjct: 501 LNSFSSELGVRFGTSLEAPHVIDVE----------SQVWPAIISIGPGNYPLNASYK 547
>gi|326931537|ref|XP_003211885.1| PREDICTED: Fanconi anemia group J protein homolog [Meleagris
gallopavo]
Length = 1257
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 72 YRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKL 131
++++ ++ + L+FWCLN + FSD+ + R+++LTSGTL+P+DSF SELG +F I+L
Sbjct: 588 HKRNLRHKTVVHMLNFWCLNPAVAFSDLND-VRTIVLTSGTLSPMDSFSSELGVKFSIQL 646
Query: 132 EANHVIDKDQVFIGVLGQG 150
EANHVI QV++G +G G
Sbjct: 647 EANHVIRNSQVWVGTIGAG 665
Score = 35.4 bits (80), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKE-TEGESNRWY 41
MTILSSR +TCI+ V + N N+LC EL E G+S +Y
Sbjct: 283 MTILSSRDYTCIHPVVSSSSSNRNELCVELLEGKHGKSCLYY 324
>gi|431890862|gb|ELK01741.1| Fanconi anemia group J protein [Pteropus alecto]
Length = 1164
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI + +++LTSGTL+P+ SF SELG F I+LEANHVI+ QV
Sbjct: 587 HVLNFWCLNPAVAFSDINDKVWTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQV 646
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 647 WVGTIGSGPK 656
>gi|449519583|ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein homolog [Cucumis sativus]
Length = 1239
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
Query: 58 GPHADEYQGESNRWYRKDRTPMSIKYT--LHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
G H +YQ R+ ++D ++T L WCLN +VF DI + + SVILTSGTL+P
Sbjct: 435 GCHMSDYQLALQRYIKRDPGKAYAEWTVTLSLWCLNPAVVFRDISDLSLSVILTSGTLSP 494
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
++SF SELG QF LEA HVID + +V+ V+ GP N PL YK
Sbjct: 495 MNSFSSELGVQFGTSLEAPHVIDVE----------SQVWPAVISTGPGNYPLNGSYK 541
>gi|354497402|ref|XP_003510809.1| PREDICTED: Fanconi anemia group J protein homolog [Cricetulus
griseus]
gi|344242804|gb|EGV98907.1| Fanconi anemia group J protein-like [Cricetulus griseus]
Length = 1166
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+FWCLN + FSDI + R+++LTSGTL+P+ SF SELG F I+LEANHV+ QV++
Sbjct: 584 LNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFNIQLEANHVVSNSQVWV 643
Query: 145 GVLGQG 150
G +G G
Sbjct: 644 GTVGSG 649
Score = 35.4 bits (80), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKET-EGESNRWY 41
MTILSSR HTC++ EV+ N N+ C EL + +G+S +Y
Sbjct: 271 MTILSSRDHTCVHPEVM-GNFNRNEKCMELLDVKQGKSCYFY 311
>gi|321476840|gb|EFX87800.1| hypothetical protein DAPPUDRAFT_311920 [Daphnia pulex]
Length = 824
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 11/121 (9%)
Query: 54 VVSQGPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTL 113
VV + + +G + ++ K Y L+ WCLNS +V +I+ES RS+I+TSGTL
Sbjct: 336 VVVRTVERKQKKGPGSSFFGKANIASQWTYALNLWCLNSAVVMHEIKESTRSIIVTSGTL 395
Query: 114 APVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
+P+ S+QSEL F + LEANHVI ++V+IG + QGP+N L +K
Sbjct: 396 SPLASYQSELDIDFKLTLEANHVI-----------PAKRVWIGTISQGPRNTLLNGTFKV 444
Query: 174 T 174
T
Sbjct: 445 T 445
>gi|449269835|gb|EMC80576.1| Fanconi anemia group J protein like protein [Columba livia]
Length = 1261
Score = 89.0 bits (219), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
Query: 72 YRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKL 131
++++ ++ + L+FWCLN + FSD+ + R+++LTSGTL+P+DSF SELG +F I+L
Sbjct: 590 HKRNLRQKTMVHVLNFWCLNPAVAFSDLSD-VRTIVLTSGTLSPMDSFSSELGVKFSIQL 648
Query: 132 EANHVIDKDQVFIGVLGQG 150
EANH+I QV++G +G G
Sbjct: 649 EANHIIRNSQVWVGTVGAG 667
Score = 36.2 bits (82), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKE-TEGESNRWY 41
MTILSSR +TCI+ V + N N++C EL E G+S +Y
Sbjct: 285 MTILSSRDYTCIHPVVSNSGSNRNEMCVELLEGKHGKSCLYY 326
>gi|297715610|ref|XP_002834155.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Pongo abelii]
Length = 1248
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI ++++LTSGTL+P+ SF SELG F I+LEANHVI QV
Sbjct: 587 HVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVIKNSQV 646
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 647 WVGTIGSGPK 656
>gi|384485133|gb|EIE77313.1| hypothetical protein RO3G_02017 [Rhizopus delemar RA 99-880]
Length = 667
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 59/101 (58%), Gaps = 11/101 (10%)
Query: 73 RKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLE 132
RK + Y L FWCLN G++F D+ +SVILTSGTL+P+D+F SEL T+F KLE
Sbjct: 450 RKSTHDSTWAYKLGFWCLNPGIIFQDMCAKTKSVILTSGTLSPMDTFASELDTKFSGKLE 509
Query: 133 ANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
ANHVID Q V++ L GP L+ +Y N
Sbjct: 510 ANHVIDPSQ-----------VWVSCLPVGPNGTYLKGVYSN 539
>gi|402899850|ref|XP_003912899.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Papio anubis]
Length = 1248
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Query: 69 NRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP 128
N+ + + +T + + L+FWCLN + FSDI ++++LTSGTL+P+ SF SELG F
Sbjct: 576 NKKHSRQKTAVRV---LNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSSELGVTFT 632
Query: 129 IKLEANHVIDKDQVFIGVLGQGQK 152
++LEANHVI QV++G +G G K
Sbjct: 633 VQLEANHVIKNSQVWVGTIGSGPK 656
>gi|332258882|ref|XP_003278520.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Nomascus leucogenys]
Length = 1248
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI ++++LTSGTL+P+ SF SELG F I+LEANHVI QV
Sbjct: 587 HVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVIKDSQV 646
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 647 WVGTIGSGPK 656
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 2/42 (4%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKE-TEGESNRWY 41
MTILSSR HTC++ EV+ N N+ C EL++ G+S +Y
Sbjct: 273 MTILSSRDHTCVHPEVV-GNFNRNEKCMELRDGKNGKSCYFY 313
>gi|345805276|ref|XP_852649.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Canis lupus familiaris]
Length = 1247
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI +++LTSGTL+P+ SF SELG F I+LEANHVI+ QV
Sbjct: 586 HVLNFWCLNPAVAFSDINGKVLTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQV 645
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 646 WVGTIGSGPK 655
>gi|8886948|gb|AAF80634.1|AC069251_27 F2D10.21 [Arabidopsis thaliana]
Length = 1273
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 10/115 (8%)
Query: 58 GPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD 117
G H +YQ R ++ + +T WC+N +VF D+ + + SVILTSGTL+P++
Sbjct: 477 GSHILDYQLGLQRSTKRGDPSGTWTHTFSLWCMNPAVVFKDLADISLSVILTSGTLSPMN 536
Query: 118 SFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
SF SELG QF LEA HVID + +V+ G + GP N PL A YK
Sbjct: 537 SFSSELGMQFGTSLEAPHVIDPN----------MQVWAGAISNGPSNYPLNASYK 581
>gi|397486822|ref|XP_003814520.1| PREDICTED: Fanconi anemia group J protein [Pan paniscus]
Length = 1249
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI ++++LTSGTL+P+ SF SELG F I+LEANH+I QV
Sbjct: 587 HVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSSELGVTFTIQLEANHIIKNSQV 646
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 647 WVGTIGSGPK 656
>gi|240254129|ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
gi|332191893|gb|AEE30014.1| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
Length = 1175
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 64/115 (55%), Gaps = 10/115 (8%)
Query: 58 GPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD 117
G H +YQ R ++ + +T WC+N +VF D+ + + SVILTSGTL+P++
Sbjct: 437 GSHILDYQLGLQRSTKRGDPSGTWTHTFSLWCMNPAVVFKDLADISLSVILTSGTLSPMN 496
Query: 118 SFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
SF SELG QF LEA HVID + +V+ G + GP N PL A YK
Sbjct: 497 SFSSELGMQFGTSLEAPHVIDPN----------MQVWAGAISNGPSNYPLNASYK 541
>gi|297850492|ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
lyrata]
gi|297338969|gb|EFH69386.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
lyrata]
Length = 1171
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 64/115 (55%), Gaps = 10/115 (8%)
Query: 58 GPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD 117
G H +YQ R ++ + +T WC+N +VF D+ + + S+ILTSGTL+P++
Sbjct: 432 GSHILDYQLGLQRSTKRGDPSRTWTHTFSLWCMNPAVVFKDLADISLSIILTSGTLSPMN 491
Query: 118 SFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
SF SELG QF LEA HVID + +V+ G + GP N PL A YK
Sbjct: 492 SFSSELGMQFGTSLEAPHVIDPN----------MQVWAGAISNGPSNYPLNASYK 536
>gi|301897118|ref|NP_114432.2| Fanconi anemia group J protein [Homo sapiens]
gi|119571815|gb|EAW51430.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
gi|119571816|gb|EAW51431.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
gi|119571817|gb|EAW51432.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
gi|119571818|gb|EAW51433.1| BRCA1 interacting protein C-terminal helicase 1, isoform CRA_a
[Homo sapiens]
Length = 1249
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI ++++LTSGTL+P+ SF SELG F I+LEANH+I QV
Sbjct: 587 HVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSSELGVTFTIQLEANHIIKNSQV 646
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 647 WVGTIGSGPK 656
>gi|57012613|sp|Q9BX63.1|FANCJ_HUMAN RecName: Full=Fanconi anemia group J protein; Short=Protein FACJ;
AltName: Full=ATP-dependent RNA helicase BRIP1; AltName:
Full=BRCA1-associated C-terminal helicase 1; AltName:
Full=BRCA1-interacting protein C-terminal helicase 1;
Short=BRCA1-interacting protein 1
gi|13661819|gb|AAK38111.1|AF360549_1 BRCA1-binding helicase-like protein BACH1 [Homo sapiens]
gi|75516497|gb|AAI01473.1| BRCA1 interacting protein C-terminal helicase 1 [Homo sapiens]
gi|75516501|gb|AAI01475.1| BRCA1 interacting protein C-terminal helicase 1 [Homo sapiens]
gi|313883612|gb|ADR83292.1| BRCA1 interacting protein C-terminal helicase 1 [synthetic
construct]
Length = 1249
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI ++++LTSGTL+P+ SF SELG F I+LEANH+I QV
Sbjct: 587 HVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSSELGVTFTIQLEANHIIKNSQV 646
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 647 WVGTIGSGPK 656
>gi|114669761|ref|XP_511607.2| PREDICTED: Fanconi anemia group J protein [Pan troglodytes]
gi|410223276|gb|JAA08857.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
gi|410257750|gb|JAA16842.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
gi|410303552|gb|JAA30376.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
gi|410331379|gb|JAA34636.1| BRCA1 interacting protein C-terminal helicase 1 [Pan troglodytes]
Length = 1249
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI ++++LTSGTL+P+ SF SELG F I+LEANH+I QV
Sbjct: 587 HVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSSELGVTFTIQLEANHIIKNSQV 646
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 647 WVGTIGSGPK 656
>gi|426238589|ref|XP_004013233.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Ovis aries]
Length = 1234
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI +++LTSGTL+P+ SF SELG F I+LEANHVI+ QV
Sbjct: 585 HVLNFWCLNPAVAFSDINGKVWTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQV 644
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 645 WVGTIGSGPK 654
>gi|301777952|ref|XP_002924394.1| PREDICTED: Fanconi anemia group J protein-like [Ailuropoda
melanoleuca]
gi|281342514|gb|EFB18098.1| hypothetical protein PANDA_013720 [Ailuropoda melanoleuca]
Length = 1249
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI +++LTSGTL+P+ SF SELG F I+LEANHVI+ QV
Sbjct: 587 HVLNFWCLNPAVAFSDISGKVWTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQV 646
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 647 WVGTIGSGPK 656
>gi|426347270|ref|XP_004041278.1| PREDICTED: Fanconi anemia group J protein-like [Gorilla gorilla
gorilla]
Length = 469
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI ++++LTSGTL+P+ SF SELG F I+LEANH+I QV
Sbjct: 62 HVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSSELGVTFTIQLEANHIIKNSQV 121
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 122 WVGTIGSGPK 131
>gi|297272722|ref|XP_002808171.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein-like
[Macaca mulatta]
Length = 1151
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 50/68 (73%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+FWCLN + FSDI ++++LTSGTL+P+ SF SELG F ++LEANHVI QV++
Sbjct: 492 LNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSSELGVTFTVQLEANHVIKNSQVWV 551
Query: 145 GVLGQGQK 152
G +G G K
Sbjct: 552 GTIGSGPK 559
>gi|338711555|ref|XP_001917874.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J
protein-like, partial [Equus caballus]
Length = 1219
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L+FWCLN + FSDI +++LTSGTL+P+ SF SELG F I++EANHVI+ QV
Sbjct: 584 HVLNFWCLNPAVAFSDINGKVWTIVLTSGTLSPMKSFSSELGVTFTIQMEANHVINNSQV 643
Query: 143 FIGVLGQGQK 152
++G +G G K
Sbjct: 644 WVGTIGSGPK 653
>gi|297462303|ref|XP_002702129.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein [Bos
taurus]
Length = 1232
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 50/68 (73%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+FWCLN + FSDI +++LTSGTL+P+ SF SELG F I+LEANHVI+ QV++
Sbjct: 587 LNFWCLNPAVAFSDINGKVWAIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWV 646
Query: 145 GVLGQGQK 152
G +G G K
Sbjct: 647 GTIGSGPK 654
>gi|297486418|ref|XP_002695655.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein,
partial [Bos taurus]
gi|296477040|tpg|DAA19155.1| TPA: BRCA1 interacting protein C-terminal helicase 1 [Bos taurus]
Length = 1169
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 50/68 (73%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+FWCLN + FSDI +++LTSGTL+P+ SF SELG F I+LEANHVI+ QV++
Sbjct: 524 LNFWCLNPAVAFSDINGKVWAIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWV 583
Query: 145 GVLGQGQK 152
G +G G K
Sbjct: 584 GTIGSGPK 591
>gi|340379357|ref|XP_003388193.1| PREDICTED: hypothetical protein LOC100635447 [Amphimedon
queenslandica]
Length = 1055
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 12/89 (13%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+LHFWCLN + FS++ + A S+ILTSGTL+P+ SF SELG FPI+LEANHV+ + Q
Sbjct: 72 SLHFWCLNPAVAFSEL-QVAHSIILTSGTLSPMSSFSSELGVIFPIQLEANHVVAQSQ-- 128
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
++ L GP + PL A Y+
Sbjct: 129 ---------TWVSTLSHGPSSQPLNASYQ 148
>gi|325191332|emb|CCA26115.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 957
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 10/92 (10%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
++ L WCL+ +VF+DI + ARSVILTSGTL P+DS+ ELG F ++LEANHV+D
Sbjct: 586 QFRLAIWCLSGAVVFADIAKDARSVILTSGTLTPMDSYAGELGLDFGVRLEANHVVD--- 642
Query: 142 VFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
+VFI + QGP + L Y+N
Sbjct: 643 -------MRTQVFIRAIMQGPGQVDLSTTYQN 667
>gi|410980592|ref|XP_003996661.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
[Felis catus]
Length = 1230
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 50/68 (73%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+FWCLN + FSDI ++++TSGTL+P+ SF SELG F I+LEANHVI+ QV++
Sbjct: 589 LNFWCLNPAVAFSDINGKVWTIVVTSGTLSPMKSFSSELGVTFSIQLEANHVINNSQVWV 648
Query: 145 GVLGQGQK 152
G +G G K
Sbjct: 649 GTIGSGPK 656
>gi|350590580|ref|XP_003483097.1| PREDICTED: Fanconi anemia group J protein-like [Sus scrofa]
Length = 801
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 49/66 (74%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+FWCLN + FSDI +++LTSGTL+P+ SF SELG F I+LEANHVI+ QV++
Sbjct: 589 LNFWCLNPAVAFSDINGKVWNIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWV 648
Query: 145 GVLGQG 150
G +G G
Sbjct: 649 GTIGSG 654
>gi|145349251|ref|XP_001419051.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579282|gb|ABO97344.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1067
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 62/102 (60%), Gaps = 13/102 (12%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRES---ARSVILTSGTLAPVDSFQSELGTQFPIKL 131
+R P+ ++FW LN L F ++ ARSV+LTSGTLAP++SF SELG FPI++
Sbjct: 454 NRLPVEELVKINFWALNPALAFRELVSENGGARSVVLTSGTLAPLNSFASELGVPFPIRM 513
Query: 132 EANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
EA H +D D ++V+ G++ GP NI L A YK+
Sbjct: 514 EAPHCVDMD----------RQVWGGIVAAGPSNIALNAGYKS 545
>gi|345487716|ref|XP_001605873.2| PREDICTED: Fanconi anemia group J protein homolog [Nasonia
vitripennis]
Length = 950
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 24/126 (19%)
Query: 54 VVSQGPHAD-EYQGESNRWY-----RKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVI 107
+SQ H D + + E N+W R+ RT + F C+NS +VFS + + R VI
Sbjct: 611 TISQSYHKDAKVKMEENKWTSGQGGRRLRT-------IKFMCMNSAIVFSQMARATRCVI 663
Query: 108 LTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPL 167
L SGTL+P +F+SELGT+F KL ANHV+ +DQV++ +G + GP+ L
Sbjct: 664 LASGTLSPTSTFESELGTKFVHKLHANHVVPRDQVYV----RG-------IASGPKGTTL 712
Query: 168 QALYKN 173
+A YKN
Sbjct: 713 RATYKN 718
>gi|328714717|ref|XP_001943091.2| PREDICTED: Fanconi anemia group J protein homolog isoform 1
[Acyrthosiphon pisum]
Length = 918
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
K + F CLN VF +++ +AR++ILTSGTL+P+ SFQSELGTQFPI LEA HVI DQ
Sbjct: 609 KNVISFLCLNPAAVFGELKSTARTIILTSGTLSPMQSFQSELGTQFPIALEAGHVIKPDQ 668
Query: 142 VFIGVLGQG 150
++ + G
Sbjct: 669 CWVSSVSVG 677
>gi|328714715|ref|XP_003245432.1| PREDICTED: Fanconi anemia group J protein homolog isoform 2
[Acyrthosiphon pisum]
Length = 912
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 50/69 (72%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
K + F CLN VF +++ +AR++ILTSGTL+P+ SFQSELGTQFPI LEA HVI DQ
Sbjct: 603 KNVISFLCLNPAAVFGELKSTARTIILTSGTLSPMQSFQSELGTQFPIALEAGHVIKPDQ 662
Query: 142 VFIGVLGQG 150
++ + G
Sbjct: 663 CWVSSVSVG 671
>gi|297850494|ref|XP_002893128.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp.
lyrata]
gi|297338970|gb|EFH69387.1| hypothetical protein ARALYDRAFT_472311 [Arabidopsis lyrata subsp.
lyrata]
Length = 1138
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 10/115 (8%)
Query: 58 GPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD 117
G H +Y+ R ++ +T WC+N +VF D+ + + S+ILTSGTL+P++
Sbjct: 410 GSHVLDYEMGLQRSAKRGTRDNGWTHTFSLWCMNPSVVFKDLADLSLSIILTSGTLSPMN 469
Query: 118 SFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
SF SELG QF LEA HVID + +V+ G + GP N PL A YK
Sbjct: 470 SFSSELGMQFGTCLEAPHVIDPN----------MQVWAGAISSGPGNFPLNASYK 514
>gi|224061865|ref|XP_002300637.1| predicted protein [Populus trichocarpa]
gi|222842363|gb|EEE79910.1| predicted protein [Populus trichocarpa]
Length = 1183
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 58 GPHADEYQGESNRWYRKD-RTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPV 116
G ++Q R+ ++D + TL WCLN +VF DI + + SVILTSGTL+P+
Sbjct: 427 GCQVSDFQLALRRYVKRDGKKAGDWTCTLSLWCLNPAVVFKDIADLSLSVILTSGTLSPM 486
Query: 117 DSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
+SF SELG QF LEA HV+D + +V + V+ P N PL A YK
Sbjct: 487 NSFSSELGVQFGTCLEAPHVVDVE----------SQVCVSVISTSPDNYPLNASYK 532
>gi|196012030|ref|XP_002115878.1| hypothetical protein TRIADDRAFT_30066 [Trichoplax adhaerens]
gi|190581654|gb|EDV21730.1| hypothetical protein TRIADDRAFT_30066 [Trichoplax adhaerens]
Length = 995
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 49/68 (72%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
Y+L+FWC+N + F DI +A SVILTSGTL+P++SF SELG F I+LEA H+I+ Q
Sbjct: 590 YSLNFWCMNPAVAFDDIGPAAHSVILTSGTLSPMNSFSSELGLAFSIRLEAAHIINYSQA 649
Query: 143 FIGVLGQG 150
+ L +G
Sbjct: 650 LVATLSEG 657
>gi|301097939|ref|XP_002898063.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262105424|gb|EEY63476.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 622
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 59/93 (63%), Gaps = 10/93 (10%)
Query: 81 IKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKD 140
I L WCL++ +VF+++ ++ SVIL SGTL+P++SF ELG FPI+LEANHV++
Sbjct: 425 IDTKLCIWCLSAAVVFAEVARNSHSVILASGTLSPMNSFAGELGVDFPIRLEANHVVN-- 482
Query: 141 QVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
++VF+G L GP + L + YKN
Sbjct: 483 --------MRKQVFVGALMNGPGGVDLLSTYKN 507
>gi|449018745|dbj|BAM82147.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 1142
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 71/131 (54%), Gaps = 18/131 (13%)
Query: 43 KDRTPMRGIEPVVSQGPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRES 102
+ R P+ G + + +Y +S R +R S YTL FWCL GL +
Sbjct: 577 QQRPPLSGTAAAEAA---SGKYVHQSAREHRS-----STGYTLSFWCLWPGLALRRATSN 628
Query: 103 ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGP 162
A +V+LTSGTL+P++S SE+G FP++L+ +HV+D +VF G+L +GP
Sbjct: 629 AHAVLLTSGTLSPLESVASEMGASFPVRLQNSHVVDP----------ATQVFAGILTKGP 678
Query: 163 QNIPLQALYKN 173
++I L + Y N
Sbjct: 679 RDIQLNSSYAN 689
>gi|339265705|ref|XP_003366015.1| fanconi anemia group J protein [Trichinella spiralis]
gi|316965098|gb|EFV49922.1| fanconi anemia group J protein [Trichinella spiralis]
Length = 824
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/104 (44%), Positives = 63/104 (60%), Gaps = 14/104 (13%)
Query: 71 WYRKDRTPMSIKYTLHFWCLNSGLV--FSDIRESARSVILTSGTLAPVDSFQSELGTQFP 128
W K R + +++FWC+N G+V F DI SARSVIL SGTLAP+ ++ +ELG F
Sbjct: 485 WLSKKRLNCFVD-SINFWCMNPGIVNIFHDISSSARSVILASGTLAPLKTYANELGLPFQ 543
Query: 129 IKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
LEA HVI D +V+IG G GP+++PL+A Y+
Sbjct: 544 YLLEAPHVILPD-----------RVWIGATGVGPKHVPLKATYQ 576
>gi|320169108|gb|EFW46007.1| hypothetical protein CAOG_03975 [Capsaspora owczarzaki ATCC 30864]
Length = 1452
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Query: 69 NRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP 128
NR R R+ + ++L+FWCLN G+ F + + ARSVILTSGTL+P+ SF SEL T+F
Sbjct: 670 NRDGRPSRSSKAWSFSLNFWCLNPGVGFRSLSK-ARSVILTSGTLSPMTSFASELQTEFA 728
Query: 129 IKLEANHVIDKDQVFIGVLGQG 150
+++E H +D Q+++G +G G
Sbjct: 729 VRMEGKHQVDPSQLWVGAVGVG 750
>gi|242050104|ref|XP_002462796.1| hypothetical protein SORBIDRAFT_02g032150 [Sorghum bicolor]
gi|241926173|gb|EER99317.1| hypothetical protein SORBIDRAFT_02g032150 [Sorghum bicolor]
Length = 1153
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 66/117 (56%), Gaps = 11/117 (9%)
Query: 57 QGPHADEYQGESNRWYRKD-RTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
+G ++ +YQ R+ +K+ +S + T+ WCLN +VF +I + SVILTSGTL+P
Sbjct: 408 KGRNSCDYQLALQRFVKKEGNDEISSRCTMSLWCLNPAVVFQEIADRTLSVILTSGTLSP 467
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
+ SF SELG QF +EA HVI+ D +VF VL GP L A YK
Sbjct: 468 MGSFTSELGVQFEACMEAPHVINAD----------SQVFAAVLSSGPTRQILNASYK 514
>gi|321471679|gb|EFX82651.1| hypothetical protein DAPPUDRAFT_48831 [Daphnia pulex]
Length = 720
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 11/98 (11%)
Query: 77 TPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHV 136
+P + L WCLN +V IR++ RS+I+TSGTL+P+DS+ SELG F I LEA+HV
Sbjct: 326 SPSRWTHVLKLWCLNPAIVLKQIRQTTRSIIVTSGTLSPLDSYASELGIDFMITLEASHV 385
Query: 137 IDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
I +V+I + QGP++ L YK T
Sbjct: 386 I-----------PANRVWIASISQGPRSTKLNGSYKTT 412
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 7/52 (13%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETEGESNRWYRKDRTPMRGIE 52
MT+L+SR+H CI+ +V ++ N N+ CQ+L + ESN + RT RGIE
Sbjct: 30 MTVLASREHACIHPDVSRSF-NKNEGCQQLNDQTSESNLY----RT--RGIE 74
>gi|147865346|emb|CAN84083.1| hypothetical protein VITISV_018998 [Vitis vinifera]
Length = 1261
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 12/117 (10%)
Query: 58 GPHADEYQGESNRWYRKDRTPMSIKYTLHF--WCLNSGLVFSDIRESARSVILTSGTLAP 115
G H +YQ R+ +KD ++ +T F WCLN +VF I + + SVILTSGTL+P
Sbjct: 362 GLHTVDYQLALQRYVKKDAGSVAGSWTCTFSLWCLNPAVVFRGIADLSLSVILTSGTLSP 421
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
+ SF SELG QF LEA HVID + +++ + P N PL A YK
Sbjct: 422 MHSFSSELGVQFGTCLEAPHVIDIE----------SQLWAAIFSTSPGNYPLNASYK 468
>gi|359491914|ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
Length = 1255
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 64/117 (54%), Gaps = 12/117 (10%)
Query: 58 GPHADEYQGESNRWYRKDRTPMSIKYTLHF--WCLNSGLVFSDIRESARSVILTSGTLAP 115
G H +YQ R+ +KD ++ +T F WCLN +VF I + + SVILTSGTL+P
Sbjct: 424 GLHTVDYQLALQRYVKKDAGSVAGSWTCTFSLWCLNPAVVFRGIADLSLSVILTSGTLSP 483
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
+ SF SELG QF LEA HVID + +++ + P N PL A YK
Sbjct: 484 MHSFSSELGVQFGTCLEAPHVIDIE----------SQLWAAIFSTSPGNYPLNASYK 530
>gi|414886610|tpg|DAA62624.1| TPA: hypothetical protein ZEAMMB73_124196 [Zea mays]
Length = 1167
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 57 QGPHADEYQGESNRWYRKD-RTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
+G ++ +YQ R+ +K+ + +S T+ WCLN +VF +I + SVILTSGTL+P
Sbjct: 421 KGRNSCDYQLALQRFVKKEGKDVISSTCTMSLWCLNPAVVFQEIADRTLSVILTSGTLSP 480
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
+ SF SELG QF +EA HVI+ D +VF VL GP L A YK
Sbjct: 481 MGSFTSELGVQFEACMEAPHVINAD----------SQVFAAVLSSGPTRQILNASYKTA 529
>gi|302768379|ref|XP_002967609.1| hypothetical protein SELMODRAFT_408754 [Selaginella moellendorffii]
gi|300164347|gb|EFJ30956.1| hypothetical protein SELMODRAFT_408754 [Selaginella moellendorffii]
Length = 1004
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 10/90 (11%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ L FWCLN G+VF++I +SV+LTSGTL+P+ SF SELGT F + +EA H+ID +
Sbjct: 427 HKLSFWCLNPGVVFNEIATICKSVVLTSGTLSPMGSFASELGTSFEMVMEAPHIIDLN-- 484
Query: 143 FIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
++ + + GP N+PL A Y+
Sbjct: 485 --------SQLLVSAVSFGPGNVPLNASYQ 506
>gi|297609925|ref|NP_001063870.2| Os09g0551800 [Oryza sativa Japonica Group]
gi|255679120|dbj|BAF25784.2| Os09g0551800 [Oryza sativa Japonica Group]
Length = 1187
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 58 GPHADEYQGESNRWYRKDRTPMSI----KYTLHFWCLNSGLVFSDIRESARSVILTSGTL 113
G H+++YQ R+ +++ ++ K + WCLN +VF DI + SVILTSGTL
Sbjct: 419 GRHSNDYQLALQRFAKREGNSVTSFIGWKCVMSLWCLNPAVVFRDIADLTLSVILTSGTL 478
Query: 114 APVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
+P+ SF SELG QF +EA HVI+ D +VF VL GP L A Y+
Sbjct: 479 SPMGSFASELGVQFEACMEAPHVINAD----------SQVFATVLSSGPTGRRLNASYRT 528
Query: 174 T 174
Sbjct: 529 A 529
>gi|168030243|ref|XP_001767633.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681162|gb|EDQ67592.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1378
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 71/146 (48%), Gaps = 29/146 (19%)
Query: 58 GPHADEYQGESNRWYRKDRTPMSIKY--TLHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
G A +YQ R+ ++D + T+ WCLN G+VF DI RS+ILTSGTL+P
Sbjct: 431 GRRAGDYQLVVRRFVKRDEGLAVTGWVTTVSLWCLNPGVVFEDIASVTRSIILTSGTLSP 490
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQ-------------------VFIGVLGQGQ----- 151
+DSF SELG F ++EA HV+D ++ V + + Q
Sbjct: 491 MDSFASELGIPFEFQMEAPHVVDMEKQVLLLEPYATICCMCILRVVKLIIFPQAAMCSRF 550
Query: 152 ---KVFIGVLGQGPQNIPLQALYKNT 174
+V+ + GP N+ L A YKN
Sbjct: 551 SRYQVWAAAVSTGPDNVSLNASYKNA 576
>gi|256053044|ref|XP_002570021.1| brca1 interacting protein C-terminal helicase 1 brip1 [Schistosoma
mansoni]
Length = 725
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 4/95 (4%)
Query: 60 HADEYQGESNRWYRKDRT-PMSI---KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
H + + + W K P+ + + +L+FWCLN +VFS + A VIL SGTL+P
Sbjct: 303 HKKSTESKMDAWISKKHVKPLFVENKQLSLNFWCLNPSVVFSQLASMAHCVILMSGTLSP 362
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
+DS ++EL QFP++LEANHVI ++ + L G
Sbjct: 363 LDSLEAELNVQFPLRLEANHVISNTRLLVTTLSHG 397
>gi|414886609|tpg|DAA62623.1| TPA: hypothetical protein ZEAMMB73_124196, partial [Zea mays]
Length = 631
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 66/119 (55%), Gaps = 11/119 (9%)
Query: 57 QGPHADEYQGESNRWYRKD-RTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
+G ++ +YQ R+ +K+ + +S T+ WCLN +VF +I + SVILTSGTL+P
Sbjct: 421 KGRNSCDYQLALQRFVKKEGKDVISSTCTMSLWCLNPAVVFQEIADRTLSVILTSGTLSP 480
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
+ SF SELG QF +EA HVI+ D +VF VL GP L A YK
Sbjct: 481 MGSFTSELGVQFEACMEAPHVINAD----------SQVFAAVLSSGPTRQILNASYKTA 529
>gi|340374870|ref|XP_003385960.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Amphimedon queenslandica]
Length = 717
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 12/89 (13%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC N G ++ +R+ RSVILTSGTL+P++SF SEL +FP+ L+ +HVI KDQ
Sbjct: 425 LCYWCFNPGYAMTELVRQGVRSVILTSGTLSPLESFTSELQLEFPVSLQGSHVIGKDQ-- 482
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
V++GV+ +GP N+ L + Y+
Sbjct: 483 ---------VWVGVVSKGPDNVHLNSSYQ 502
>gi|449455726|ref|XP_004145602.1| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group J protein
homolog [Cucumis sativus]
Length = 1042
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 58 GPHADEYQGESNRWYRKDRTPMSIKYT--LHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
G H +YQ R+ ++D K+T L WCLN +VF DI + + SVILTSGTL+P
Sbjct: 441 GCHMSDYQLALQRYTKRDPEKACAKWTVTLSLWCLNPAVVFRDIGDLSLSVILTSGTLSP 500
Query: 116 VDSFQSELGTQFPIKLEANHVID-KDQVFIGVLGQG 150
++SF SELG +F LEA HVID + QV+ ++ G
Sbjct: 501 LNSFSSELGVRFGTSLEAPHVIDVESQVWPAIISIG 536
>gi|350646191|emb|CCD59102.1| brca1 interacting protein C-terminal helicase 1 brip1, putative
[Schistosoma mansoni]
Length = 725
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+L+FWCLN +VFS + A VIL SGTL+P+DS ++EL QFP++LEANHVI ++
Sbjct: 331 SLNFWCLNPSVVFSQLASMAHCVILMSGTLSPLDSLEAELNVQFPLRLEANHVISNTRLL 390
Query: 144 IGVLGQG 150
+ L G
Sbjct: 391 VTTLSHG 397
>gi|256053042|ref|XP_002570020.1| brca1 interacting protein C-terminal helicase 1 brip1 [Schistosoma
mansoni]
Length = 167
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 48/69 (69%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
+ +L+FWCLN +VFS + A VIL SGTL+P+DS ++EL QFP++LEANHVI +
Sbjct: 41 QLSLNFWCLNPSVVFSQLASMAHCVILMSGTLSPLDSLEAELNVQFPLRLEANHVISNTR 100
Query: 142 VFIGVLGQG 150
+ + L G
Sbjct: 101 LLVTTLSHG 109
>gi|328772350|gb|EGF82388.1| hypothetical protein BATDEDRAFT_22849 [Batrachochytrium
dendrobatidis JAM81]
Length = 996
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 12/90 (13%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L FWC NSG+ ++ R RS+++ SGTL+P+D F E+G FP +LE HVID+ QV+
Sbjct: 391 LSFWCFNSGVAMQELKRMKVRSIVVASGTLSPLDGFSDEMGIPFPHRLENTHVIDQSQVY 450
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
I V+ +G QNIP+ YK+
Sbjct: 451 ISVVTKGS-----------QNIPISTAYKS 469
>gi|328770876|gb|EGF80917.1| hypothetical protein BATDEDRAFT_1044 [Batrachochytrium
dendrobatidis JAM81]
Length = 639
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
YT FWC+N ++F I +S+ILTSGT++P+ SF ELG +F LEA H+I DQ
Sbjct: 370 YTFSFWCMNPAVIFKHIESMTKSIILTSGTMSPISSFSRELGVKFAHTLEAPHIIKDDQ- 428
Query: 143 FIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
+ IG L G N+PL +YK+
Sbjct: 429 ----------LCIGSLPSGANNMPLVGVYKS 449
>gi|357159919|ref|XP_003578599.1| PREDICTED: uncharacterized protein LOC100829852 [Brachypodium
distachyon]
Length = 1225
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 63/121 (52%), Gaps = 12/121 (9%)
Query: 58 GPHADEYQGESNRWYRKDRTPMSI--KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
G H +YQ + +++ + I + + WCL+ +VF I + SVILTSGTL+P
Sbjct: 426 GCHFYDYQLAFQHFVQREGSSSVIGSRSVMSLWCLSPAVVFQGISDLTLSVILTSGTLSP 485
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNTL 175
+ SF SELG QF +EA HVID D +VF V+ GP PL A YK
Sbjct: 486 MGSFASELGVQFDACMEAPHVIDAD----------SQVFASVISSGPTKYPLNASYKTAD 535
Query: 176 V 176
V
Sbjct: 536 V 536
>gi|302847399|ref|XP_002955234.1| hypothetical protein VOLCADRAFT_96085 [Volvox carteri f.
nagariensis]
gi|300259526|gb|EFJ43753.1| hypothetical protein VOLCADRAFT_96085 [Volvox carteri f.
nagariensis]
Length = 1606
Score = 80.1 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 10/91 (10%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+L WCLN + F + + A SV+LTSGTLAP+DSF SELGT+F +LEA HV+D
Sbjct: 698 SLGLWCLNPAVAFRSLADKAHSVVLTSGTLAPLDSFASELGTEFHFRLEAPHVVD----- 752
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
++V+ GV+ +GP L A Y+ +
Sbjct: 753 -----MSRQVWAGVVPRGPGGSLLSATYRES 778
>gi|198421637|ref|XP_002120480.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 1008
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 71 WYRKDRTPMSIKYTLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPI 129
W R T T+ FWC + G ++ ++ R++ILTSGTL+P++SF SEL FPI
Sbjct: 433 WKRSANTSSKPGRTISFWCFSPGYAMTNLVKCGVRNLILTSGTLSPLESFTSELQIDFPI 492
Query: 130 KLEANHVIDKDQVFIGVLGQGQK 152
LE +HVIDK QVF+ L G+K
Sbjct: 493 TLENDHVIDKHQVFVITLTHGKK 515
>gi|358334134|dbj|GAA52588.1| fanconi anemia group J protein homolog [Clonorchis sinensis]
Length = 668
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%)
Query: 69 NRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP 128
N+ K R + + +L+FWCLN +VFSD+ R +IL SGTL+P+++ ++ELG FP
Sbjct: 329 NKRSAKSRYVEARELSLNFWCLNPSVVFSDLASEVRCLILVSGTLSPLEALEAELGVAFP 388
Query: 129 IKLEANHVIDKDQVF 143
I+LEA HVI KD++
Sbjct: 389 IRLEAAHVIPKDRLL 403
>gi|384246051|gb|EIE19542.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 1621
Score = 79.3 bits (194), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 24/133 (18%)
Query: 60 HADEYQGESNRWYRKDRTPMSIK------------YTLHF--WCLNSGLVFSDIRESARS 105
+ +Y+ RWYR + + + L F WCLN + F I +ARS
Sbjct: 397 NVSDYRLALQRWYRSSQPRRRGRRREDDEEDEVAGWALQFCLWCLNPAVAFHSIAAAARS 456
Query: 106 VILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNI 165
+ILTSGTL+P+DSF SEL T FP++ EA HVI+ +V+ G + GP ++
Sbjct: 457 IILTSGTLSPLDSFASELDTSFPVRFEAPHVINAR----------LQVWAGSICAGPDDV 506
Query: 166 PLQALYKNTLVGD 178
+ A Y+++L D
Sbjct: 507 KIAATYEHSLKPD 519
>gi|449455724|ref|XP_004145601.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Cucumis sativus]
Length = 1027
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 58 GPHADEYQGESNRWYRKDRTPMSIKYT--LHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
G H +YQ R+ ++D ++T L WCLN +VF DI + + SVILTSGTL+P
Sbjct: 430 GCHMSDYQLALQRYTKRDPGKAYAEWTVTLSLWCLNPAVVFRDIGDLSLSVILTSGTLSP 489
Query: 116 VDSFQSELGTQFPIKLEANHVID 138
++SF SELG QF LEA HVID
Sbjct: 490 MNSFSSELGVQFGTSLEAPHVID 512
>gi|307202440|gb|EFN81860.1| Fanconi anemia group J protein [Harpegnathos saltator]
Length = 293
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 53/91 (58%), Gaps = 11/91 (12%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
TL C+N +VF + RSVIL SGTLAP SF+SELGT+FP KL ANH+I ++Q
Sbjct: 1 TLKLVCMNPAVVFEPLSRITRSVILASGTLAPTSSFESELGTRFPHKLHANHIIPREQ-- 58
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
V++ + +GP L A YKN
Sbjct: 59 ---------VYVRCIPRGPNGESLLANYKNV 80
>gi|334182721|ref|NP_173498.3| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
gi|332191897|gb|AEE30018.1| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
Length = 1144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 10/89 (11%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
T WC+N +VF D+ + + S+ILTSGTL+P++SF SELG QF LEA HVID +
Sbjct: 399 TFSLWCMNPSVVFKDLADLSLSIILTSGTLSPMNSFSSELGMQFGTCLEAPHVIDPN--- 455
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
+V+ G + P N PL A Y+
Sbjct: 456 -------MQVWAGAISTVPGNYPLNASYR 477
>gi|8886947|gb|AAF80633.1|AC069251_26 F2D10.24 [Arabidopsis thaliana]
Length = 1119
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 10/89 (11%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
T WC+N +VF D+ + + S+ILTSGTL+P++SF SELG QF LEA HVID +
Sbjct: 383 TFSLWCMNPSVVFKDLADLSLSIILTSGTLSPMNSFSSELGMQFGTCLEAPHVIDPN--- 439
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
+V+ G + P N PL A Y+
Sbjct: 440 -------MQVWAGAISTVPGNYPLNASYR 461
>gi|432960238|ref|XP_004086424.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Oryzias latipes]
Length = 1167
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 55/93 (59%), Gaps = 12/93 (12%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G D+ R+ R +ILTSGTL+P+ SF SE+ +FP+ LE +HVI++DQ
Sbjct: 453 LSYWCFSPGFSMQDLERQGVRCIILTSGTLSPLSSFTSEMRIEFPVSLENSHVIERDQ-- 510
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALYKNTLV 176
+F+ V+ +GP +PL + + V
Sbjct: 511 ---------IFVSVVDRGPDGVPLSSAFDRRFV 534
>gi|222642047|gb|EEE70179.1| hypothetical protein OsJ_30256 [Oryza sativa Japonica Group]
Length = 1456
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
K + WCLN +VF DI + SVILTSGTL+P+ SF SELG QF +EA HVI+ D
Sbjct: 413 KCVMSLWCLNPAVVFRDIADLTLSVILTSGTLSPMGSFASELGVQFEACMEAPHVINAD- 471
Query: 142 VFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
+VF VL GP L A Y+
Sbjct: 472 ---------SQVFATVLSSGPTGRRLNASYRTA 495
>gi|218202591|gb|EEC85018.1| hypothetical protein OsI_32311 [Oryza sativa Indica Group]
Length = 1265
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
K + WCLN +VF DI + SVILTSGTL+P+ SF SELG QF +EA HVI+ D
Sbjct: 417 KCVMSLWCLNPAVVFRDIADLTLSVILTSGTLSPMGSFASELGVQFEACMEAPHVINAD- 475
Query: 142 VFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
+VF VL GP L A Y+
Sbjct: 476 ---------SQVFATVLSSGPTGRRLNASYRTA 499
>gi|50726319|dbj|BAD33894.1| putative BRCA1 interacting protein C-terminal helicase 1 [Oryza
sativa Japonica Group]
Length = 1366
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 51/93 (54%), Gaps = 10/93 (10%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
K + WCLN +VF DI + SVILTSGTL+P+ SF SELG QF +EA HVI+ D
Sbjct: 458 KCVMSLWCLNPAVVFRDIADLTLSVILTSGTLSPMGSFASELGVQFEACMEAPHVINAD- 516
Query: 142 VFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
+VF VL GP L A Y+
Sbjct: 517 ---------SQVFATVLSSGPTGRRLNASYRTA 540
>gi|348533666|ref|XP_003454326.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Oreochromis niloticus]
Length = 1193
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G D + + R +ILTSGTL+P+ SF SE+ +FP++LE +HVI++DQ+F
Sbjct: 451 LSYWCFSPGFSMQDLVNQGVRCIILTSGTLSPLSSFTSEMRIEFPVRLENSHVIERDQIF 510
Query: 144 IGVLGQG 150
+ ++ QG
Sbjct: 511 VSIIAQG 517
>gi|307108093|gb|EFN56334.1| hypothetical protein CHLNCDRAFT_144794 [Chlorella variabilis]
Length = 1763
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 9/91 (9%)
Query: 84 TLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL +WC + GL + + RS++LTSGTL+P+DSF ELG FPI+LE HVI K+
Sbjct: 764 TLSYWCFSPGLSMQQLTDMKVRSILLTSGTLSPLDSFAHELGLPFPIRLENPHVIAKE-- 821
Query: 143 FIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
Q V++GV+ GP L + Y+N
Sbjct: 822 ------QASGVWVGVVPTGPSGHALNSSYQN 846
>gi|449664763|ref|XP_002167953.2| PREDICTED: regulator of telomere elongation helicase 1-like [Hydra
magnipapillata]
Length = 1225
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 2/91 (2%)
Query: 62 DEYQGESNRWYRKDR-TPMSIKYTLHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSF 119
D+ Q + W + + T TL +WC N GL ++R+ RS+ILTSGTL+P+ S
Sbjct: 455 DKKQKSLDAWAQSSKQTKKYSARTLSYWCFNPGLTMKELRDQGVRSIILTSGTLSPLASL 514
Query: 120 QSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
++E F ++LE HVI+K QVF+G+L QG
Sbjct: 515 KAEFLIPFDVELENGHVIEKQQVFVGILPQG 545
>gi|47212324|emb|CAF91262.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1212
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G D + + R VILTSGTL+P+DSF SE+ FP++LE HVI++DQ+F
Sbjct: 435 LSYWCFSPGFSMQDLVNQGVRCVILTSGTLSPLDSFTSEMRIDFPVRLENGHVIERDQIF 494
Query: 144 IGVLGQG 150
+ V+ +G
Sbjct: 495 VSVVDRG 501
>gi|324502086|gb|ADY40918.1| Fanconi anemia group J protein [Ascaris suum]
Length = 962
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 11/92 (11%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
+ T +FWC+ L + D + RSVIL SGTL P+D+F+SELGT+F +E + VI D
Sbjct: 639 RVTFNFWCMRPALAYLDAFKECRSVILASGTLCPMDTFRSELGTEFQQMMEGSQVIPSDH 698
Query: 142 VFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
+F V+ GP PL Y+N
Sbjct: 699 -----------IFAAVIPSGPTGYPLCGTYRN 719
>gi|410898938|ref|XP_003962954.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Takifugu rubripes]
Length = 1074
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G D + + R +ILTSGTL+P+ SF SE+ +FP+ LE +HVID+DQ+F
Sbjct: 443 LSYWCFSPGFSMQDLVNQGVRCIILTSGTLSPLSSFTSEMRIEFPVSLENSHVIDRDQIF 502
Query: 144 IGVLGQG 150
+ V+ +G
Sbjct: 503 VSVVDRG 509
>gi|297745566|emb|CBI40731.3| unnamed protein product [Vitis vinifera]
Length = 1218
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 64/134 (47%), Gaps = 27/134 (20%)
Query: 58 GPHADEYQGESNRWYRKDR-----------TPMSIKY------TLHFWCLNSGLVFSDIR 100
G H +YQ R+ +KD M +++ T WCLN +VF I
Sbjct: 439 GLHTVDYQLALQRYVKKDAGHHLSVRLHLIKLMLVEFIQNWTCTFSLWCLNPAVVFRGIA 498
Query: 101 ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQ 160
+ + SVILTSGTL+P+ SF SELG QF LEA HVID + +++ +
Sbjct: 499 DLSLSVILTSGTLSPMHSFSSELGVQFGTCLEAPHVIDIE----------SQLWAAIFST 548
Query: 161 GPQNIPLQALYKNT 174
P N PL A YK
Sbjct: 549 SPGNYPLNASYKTA 562
>gi|403369956|gb|EJY84835.1| Isoform 4 of Regulator of telomere elongation helicase 1 [Oxytricha
trifallax]
Length = 1415
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L FWC N+G+ F +I+E RS+ILTSGTL+P++SFQ+EL QF +LE HVI +QV
Sbjct: 726 LSFWCFNAGIGFREIQELLPRSIILTSGTLSPLNSFQAELQIQFNQRLENPHVISPEQVS 785
Query: 144 IGVLGQG 150
I +L +G
Sbjct: 786 INILTKG 792
>gi|403335726|gb|EJY67043.1| Regulator of telomere elongation helicase 1 [Oxytricha trifallax]
Length = 1454
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 84 TLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+L FWC N GL F I + RS+ILTSGTL P+ SFQ EL FPIK+E HVI K+Q
Sbjct: 535 SLGFWCFNPGLGFQKIVNLNPRSLILTSGTLYPMSSFQKELMMDFPIKIENKHVISKEQA 594
Query: 143 FIGVLGQGQK 152
I +L G K
Sbjct: 595 SISILTNGVK 604
>gi|452820691|gb|EME27730.1| DNA excision repair protein ERCC-2 [Galdieria sulphuraria]
Length = 777
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 47/69 (68%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
+ TL +WC N G+V + + R ++LTSGTL+P+ +SEL FPI+LE H+I + Q
Sbjct: 439 RITLSYWCFNPGVVMKQLVKGVRCLVLTSGTLSPLSFLESELQIPFPIQLENRHIISQHQ 498
Query: 142 VFIGVLGQG 150
+F+G+LG G
Sbjct: 499 LFVGMLGLG 507
>gi|449015796|dbj|BAM79198.1| similar to BRCA1-binding helicase-like protein BACH1
[Cyanidioschyzon merolae strain 10D]
Length = 1103
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Query: 60 HADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
HA +Y+ R R+ T +++ L WC+N + F +R++ARS++LTSGTL+P++SF
Sbjct: 664 HATDYRLVLRREMRQG-TYGGVEFKLGLWCMNPAIAFRHLRDNARSIVLTSGTLSPMESF 722
Query: 120 QSELGTQFPIKLEANHVIDKDQ-VFIGVLG 148
+SEL T F + E +H+ID ++ V + V+G
Sbjct: 723 RSELATDFLCQTECDHIIDPEKHVRVCVVG 752
>gi|325180138|emb|CCA14540.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 911
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++WC + GL F DIR ++ ++ILTSGTL+P+ + ELG +FPI+LE HVID Q +
Sbjct: 221 FNYWCFHPGLTFQDIRSKNVYNIILTSGTLSPLKTTIRELGIEFPIQLENKHVIDASQAW 280
Query: 144 IGVLGQG 150
+GVL +G
Sbjct: 281 VGVLSKG 287
>gi|326428226|gb|EGD73796.1| hypothetical protein PTSG_05489 [Salpingoeca sp. ATCC 50818]
Length = 1032
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 77 TPMSIKYTLHFWCLNSGLVF-SDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANH 135
P T+ FWC S S I++ RSV+LTSGTL+P+D+F +EL FPI+LE H
Sbjct: 438 APAGNPRTISFWCFTSSFAMKSLIQDGVRSVVLTSGTLSPLDTFAAELMVDFPIRLENPH 497
Query: 136 VIDKDQVFIGVLGQGQK 152
+I K QV+ GVL G +
Sbjct: 498 IISKKQVWAGVLTCGPR 514
>gi|443694244|gb|ELT95437.1| hypothetical protein CAPTEDRAFT_179377 [Capitella teleta]
Length = 837
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 64/120 (53%), Gaps = 18/120 (15%)
Query: 55 VSQGPHADEYQGESNRWYRKDRTPMSIKY--TLHFWCLNSGLVFSD-IRESARSVILTSG 111
+ Q P D ++ +S+ W P S K TL +WC + D I +S+ILTSG
Sbjct: 434 IRQTP-TDNFKSKSSGW---GAAPTSAKTGRTLSYWCFSPSHTMLDLISRGVKSIILTSG 489
Query: 112 TLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALY 171
TL+P+ SF+SE+G F I+LE HVID Q V++G L +GP N PL + Y
Sbjct: 490 TLSPISSFKSEMGIDFQIELENPHVIDPKQ-----------VWVGTLSKGPDNEPLCSDY 538
>gi|449672585|ref|XP_004207744.1| PREDICTED: Fanconi anemia group J protein homolog, partial [Hydra
magnipapillata]
Length = 372
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
Y + + CLN +VFS++ +R VIL+SGTL+P+ SF SELG FPI E NH+I QV
Sbjct: 107 YEIKWCCLNPAVVFSEVGRHSRCVILSSGTLSPMSSFASELGIDFPITYEGNHIISDSQV 166
Query: 143 FIGVLGQG 150
++ L G
Sbjct: 167 WVSTLSVG 174
>gi|322792265|gb|EFZ16249.1| hypothetical protein SINV_00648 [Solenopsis invicta]
Length = 599
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 71 WYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK 130
W K+ I+ TL C+N + F+ + RSVIL SGTL P SFQSELGT+FP
Sbjct: 282 WLSKNTEKTKIR-TLKVICMNPAVTFAPLARDTRSVILASGTLTPTTSFQSELGTKFPRI 340
Query: 131 LEANHVIDKDQVFIGVL-----GQGQKV 153
+ NH+I KDQ++I + GQ KV
Sbjct: 341 VNPNHIIPKDQIYIRCIPRAPNGQSFKV 368
>gi|224054204|ref|XP_002298143.1| predicted protein [Populus trichocarpa]
gi|222845401|gb|EEE82948.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 60 HADEY-QGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVD 117
HA+ Y +GE+N D TL +WC N G+ + R RS+ILTSGTL+P+D
Sbjct: 390 HANFYREGEANA---ADVLKGKPSRTLSWWCFNPGIAMQEFSRMGVRSIILTSGTLSPLD 446
Query: 118 SFQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
SF EL FPI+LE HVI +Q++ GV+ G
Sbjct: 447 SFAQELKLDFPIRLENPHVISSNQIWAGVVPAG 479
>gi|242057873|ref|XP_002458082.1| hypothetical protein SORBIDRAFT_03g026670 [Sorghum bicolor]
gi|241930057|gb|EES03202.1| hypothetical protein SORBIDRAFT_03g026670 [Sorghum bicolor]
Length = 759
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL +WC N GL + ++ RS+ILTSGTL+P+DS EL +FP++LE HVI DQ+
Sbjct: 433 TLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLAMELNLEFPVRLENPHVISSDQI 492
Query: 143 FIGVLGQG 150
++GV+ G
Sbjct: 493 WVGVVPVG 500
>gi|222618779|gb|EEE54911.1| hypothetical protein OsJ_02439 [Oryza sativa Japonica Group]
Length = 1025
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 81 IKYTLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDK 139
+ TL +WC N GL + ++ RS+ILTSGTL+P+DS EL +FP++LE HVI
Sbjct: 446 VSRTLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLALELNLEFPVRLENPHVIAS 505
Query: 140 DQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
DQ +++GV+ GP PL + Y+
Sbjct: 506 DQ-----------IWVGVVPVGPSGHPLNSSYR 527
>gi|218188567|gb|EEC70994.1| hypothetical protein OsI_02661 [Oryza sativa Indica Group]
Length = 984
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 81 IKYTLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDK 139
+ TL +WC N GL + ++ RS+ILTSGTL+P+DS EL +FP++LE HVI
Sbjct: 405 VSRTLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLALELNLEFPVRLENPHVIAS 464
Query: 140 DQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
DQ +++GV+ GP PL + Y+
Sbjct: 465 DQ-----------IWVGVVPVGPSGHPLNSSYR 486
>gi|297597115|ref|NP_001043456.2| Os01g0592900 [Oryza sativa Japonica Group]
gi|53791584|dbj|BAD52706.1| DEAH helicase isoform 5-like [Oryza sativa Japonica Group]
gi|255673416|dbj|BAF05370.2| Os01g0592900 [Oryza sativa Japonica Group]
Length = 876
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 12/93 (12%)
Query: 81 IKYTLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDK 139
+ TL +WC N GL + ++ RS+ILTSGTL+P+DS EL +FP++LE HVI
Sbjct: 297 VSRTLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLALELNLEFPVRLENPHVIAS 356
Query: 140 DQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
DQ +++GV+ GP PL + Y+
Sbjct: 357 DQ-----------IWVGVVPVGPSGHPLNSSYR 378
>gi|403361814|gb|EJY80616.1| hypothetical protein OXYTRI_21994 [Oxytricha trifallax]
Length = 957
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 65 QGESNRWYR-KDRTPMSIKYTLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSE 122
Q + N+ Y+ K + K L FWC N+G+ F ++++ +S+ILTSGTL P++SFQ+E
Sbjct: 424 QMQFNKKYKPKQFMQRTSKRILAFWCFNAGICFRELQKLEPKSIILTSGTLTPMNSFQAE 483
Query: 123 LGTQFPIKLEANHVIDKDQVFIGVLGQGQK 152
L +F ++E HVI DQV I VL +G K
Sbjct: 484 LQLKFNQRIENPHVISTDQVSISVLTKGIK 513
>gi|357130391|ref|XP_003566832.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Brachypodium distachyon]
Length = 872
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL +WC N GL + ++ RS+ILTSGTL+P+DS EL +FP++LE HVI DQ+
Sbjct: 300 TLSWWCFNPGLAMEEFLKLGVRSIILTSGTLSPLDSLAMELNLEFPVRLENPHVISPDQI 359
Query: 143 FIGVLGQG 150
++GV+ G
Sbjct: 360 WVGVVPVG 367
>gi|397614354|gb|EJK62748.1| hypothetical protein THAOC_16627, partial [Thalassiosira oceanica]
Length = 1353
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
T+ FWC L ++ + RS+++TSGTL+P+ SF ELG FP++LE +HVI DQ+
Sbjct: 499 TISFWCFAPSLAMRELTFLNVRSILITSGTLSPLPSFSMELGLDFPVQLENDHVIKPDQI 558
Query: 143 FIGVLGQG 150
F+ VLG+G
Sbjct: 559 FVRVLGKG 566
>gi|298706777|emb|CBJ29700.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1061
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
Query: 80 SIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVID- 138
+++ L FWC ++ FS+I + SV+LTSGTL+P++SF ELG +FP +LEANHVI+
Sbjct: 577 AMETYLCFWCQSASTCFSEIDKQVHSVVLTSGTLSPMNSFAGELGIEFPHRLEANHVINV 636
Query: 139 KDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNTLV 176
K Q + +G KV + ++ Q N L+
Sbjct: 637 KKQCLVTSVGYFGKVSLDARYTNQHDLKYQDALGNALL 674
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETEGESNRWYRKDRTPMRGIEPV 54
M +L+SRK TCIN E + I+D C+ L + + + +YR+ + + PV
Sbjct: 270 MALLASRKSTCINREACSDPKGIDDACKRLLKEKACT--YYRRAKWAQTKLPPV 321
>gi|197098236|ref|NP_001124929.1| regulator of telomere elongation helicase 1 [Pongo abelii]
gi|75042437|sp|Q5RE34.1|RTEL1_PONAB RecName: Full=Regulator of telomere elongation helicase 1
gi|55726407|emb|CAH89973.1| hypothetical protein [Pongo abelii]
Length = 1302
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + GL + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 454 LSYWCFSPGLSMRELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 513
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 514 VGVVPRG 520
>gi|340717629|ref|XP_003397282.1| PREDICTED: Fanconi anemia group J protein homolog [Bombus
terrestris]
Length = 976
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 12/126 (9%)
Query: 48 MRGIEPVVSQGPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVI 107
M +++ D N W ++ TL C+N G+ F+ + ARS+I
Sbjct: 629 MNDFRACITETTVKDFKYATENTWLSSKVCTQRVR-TLKLLCMNPGVTFAPLARQARSII 687
Query: 108 LTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPL 167
L SGTL+P SFQSELGT F L HVI K+Q V+ + QGP + L
Sbjct: 688 LASGTLSPTASFQSELGTSFAHVLNTGHVIPKEQ-----------VYAICIPQGPNEVKL 736
Query: 168 QALYKN 173
+A Y++
Sbjct: 737 RANYQS 742
>gi|339251144|ref|XP_003373055.1| fanconi anemia group J protein [Trichinella spiralis]
gi|316969101|gb|EFV53261.1| fanconi anemia group J protein [Trichinella spiralis]
Length = 1052
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 11/84 (13%)
Query: 89 CLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLG 148
C + +F DI SARSVIL SGTLAP+ ++ +ELG F LEA HVI D
Sbjct: 732 CYSYKFIFHDISSSARSVILASGTLAPLKTYANELGLPFQYLLEAPHVILPD-------- 783
Query: 149 QGQKVFIGVLGQGPQNIPLQALYK 172
+V+IG G GP+++PL+A Y+
Sbjct: 784 ---RVWIGATGVGPKHVPLKATYQ 804
>gi|328871465|gb|EGG19835.1| DEAD/DEAH box helicase [Dictyostelium fasciculatum]
Length = 1125
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 12/88 (13%)
Query: 88 WCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVL 147
WC+N F IRE AR++ILTSGTLAP++SF SEL + FP+ E +G L
Sbjct: 648 WCMNPRSAFKSIREKARTIILTSGTLAPLNSFASELSSPFPVTAE-----------LGNL 696
Query: 148 GQ-GQKVFIGVLGQGPQNIPLQALYKNT 174
G ++V+IG LG G N + +K +
Sbjct: 697 GDITKRVWIGTLGVGTNNTKMDCTFKGS 724
>gi|357455003|ref|XP_003597782.1| Regulator of telomere elongation helicase [Medicago truncatula]
gi|355486830|gb|AES68033.1| Regulator of telomere elongation helicase [Medicago truncatula]
Length = 1089
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 81 IKYTLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDK 139
+ TL +WC N G+ + ++ RS+ILTSGTL+P+DSF EL FPI+LE HVI
Sbjct: 454 VSRTLSWWCFNPGIALEEFAKDGVRSIILTSGTLSPLDSFAEELKLDFPIRLENPHVIGP 513
Query: 140 DQVFIGVLGQG 150
+Q++ GV+ G
Sbjct: 514 NQIWAGVVPVG 524
>gi|356547406|ref|XP_003542103.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Glycine max]
Length = 1001
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 81 IKYTLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDK 139
+ TL +WC N G+ D + RS+ILTSGTL+P++SF EL FPI+LE HVI
Sbjct: 411 VSRTLSWWCFNPGIAMEDFPKYGVRSIILTSGTLSPMESFAQELKLDFPIRLENPHVITA 470
Query: 140 DQVFIGVLGQG 150
+Q++ GVL G
Sbjct: 471 NQIWAGVLPVG 481
>gi|255078886|ref|XP_002503023.1| predicted protein [Micromonas sp. RCC299]
gi|226518289|gb|ACO64281.1| predicted protein [Micromonas sp. RCC299]
Length = 1566
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 81 IKYTLHFWCLNSGLVFSDIRE--SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVID 138
+ TL W LN L F+D+ AR V+LTSGTLAP+ SF SELG FPI++EA H +D
Sbjct: 483 VAVTLSLWALNPALAFNDLAGPGGARCVVLTSGTLAPLSSFASELGVSFPIRMEAPHCVD 542
Query: 139 -KDQVFIGVLGQG 150
QV+ G +G G
Sbjct: 543 VHKQVWAGAVGVG 555
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKE 32
M +L SR H CI+ V K NIND C++L E
Sbjct: 152 MVVLGSRDHYCIHPSVRKRGRNINDECKQLLE 183
>gi|350407679|ref|XP_003488158.1| PREDICTED: Fanconi anemia group J protein-like [Bombus impatiens]
Length = 959
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 11/90 (12%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
TL C+N G+ F+ + ARS+IL SGTL+P SFQSELGT F L HVI K+Q
Sbjct: 647 TLKLLCMNPGVTFAPLARQARSIILASGTLSPTASFQSELGTSFAHVLNTGHVIPKEQ-- 704
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
V+ + QGP + L+A Y++
Sbjct: 705 ---------VYAICVPQGPNEVKLRANYQS 725
>gi|345325239|ref|XP_001508332.2| PREDICTED: regulator of telomere elongation helicase 1
[Ornithorhynchus anatinus]
Length = 1585
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTLAP+ SF E+ FP+ LE HVIDK Q++
Sbjct: 453 LSYWCFSPGYSMHELVRQGVRTIILTSGTLAPISSFTMEMQIPFPVSLENPHVIDKHQIW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPKG 519
>gi|357454989|ref|XP_003597775.1| Regulator of telomere elongation helicase [Medicago truncatula]
gi|355486823|gb|AES68026.1| Regulator of telomere elongation helicase [Medicago truncatula]
Length = 1048
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 81 IKYTLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDK 139
+ TL +WC N G+ + ++ RS+ILTSGTL+P+DSF EL FPI+LE HVI
Sbjct: 413 VSRTLSWWCFNPGIALEEFAKDGVRSIILTSGTLSPLDSFAEELKLDFPIRLENPHVIGP 472
Query: 140 DQVFIGVLGQG 150
+Q++ GV+ G
Sbjct: 473 NQIWAGVVPVG 483
>gi|449274178|gb|EMC83461.1| Regulator of telomere elongation helicase 1, partial [Columba
livia]
Length = 1124
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 24/140 (17%)
Query: 47 PMRGIEPVVSQGPHADEYQGESNRWYRKDRTPM----SIKY---TLHFWCLNSGLVFSD- 98
P R I H D SN +K RT + S K TL +WC + G +
Sbjct: 413 PHRSISKYYKVHIHLD-----SNNQKKKQRTDLWNSSSAKKQGKTLSYWCFSPGYSMHEL 467
Query: 99 IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVL 158
+R+ R++ILTSGTL+P+ SF E+ FP+ LE HVIDK Q +++G++
Sbjct: 468 VRQGVRTIILTSGTLSPLSSFTMEMQIPFPVSLENPHVIDKHQ-----------LWVGII 516
Query: 159 GQGPQNIPLQALYKNTLVGD 178
+GP L + Y+ GD
Sbjct: 517 PKGPDGTVLTSTYERRFSGD 536
>gi|428173640|gb|EKX42541.1| hypothetical protein GUITHDRAFT_111516 [Guillardia theta CCMP2712]
Length = 1115
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 68 SNRWYRKDRTP--MSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGT 125
+ R R R P ++ ++ WCLN + F + R+VILTSGTL+P+ SF +ELGT
Sbjct: 450 TTREERGGRRPGQAKLELSMSLWCLNPAVAFKAVSSQTRAVILTSGTLSPITSFATELGT 509
Query: 126 QFPIKLEANHVID-KDQVFIG 145
F + +A HVID QVF+G
Sbjct: 510 TFHMTYQAPHVIDTSKQVFVG 530
>gi|403351116|gb|EJY75039.1| putative: regulator of telomere elongation helicase 1 [Oxytricha
trifallax]
Length = 1087
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 82 KYTLHFWCLNSGLVF-SDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKD 140
K + WC N F S + E R++I +SGTLAP+ +++SEL T FPIKLE +HVIDKD
Sbjct: 457 KRKIALWCFNPSFAFQSLLEEKPRNIIFSSGTLAPLHTYESELETTFPIKLENDHVIDKD 516
Query: 141 -QVFIGVL 147
QV + +L
Sbjct: 517 SQVMVSIL 524
>gi|223997568|ref|XP_002288457.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975565|gb|EED93893.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 746
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
T+ +WC L ++ RS+++TSGTL+P+ SF ELG FP++LE +HVI DQ+
Sbjct: 425 TISYWCFAPALAMRELSFLKVRSILITSGTLSPLPSFSLELGLDFPVQLENDHVIQSDQI 484
Query: 143 FIGVLGQG 150
F+ VLG+G
Sbjct: 485 FVRVLGKG 492
>gi|167999293|ref|XP_001752352.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696747|gb|EDQ83085.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 765
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 12/90 (13%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC N GL + + RSVILTSGTLAP++SF EL F ++LE HVID Q
Sbjct: 422 LSWWCFNPGLAMEEFSKMGVRSVILTSGTLAPLESFAIELNLAFDVRLENPHVIDASQ-- 479
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
V++GV+ GP PL + Y++
Sbjct: 480 ---------VWVGVVSNGPSGRPLNSSYRS 500
>gi|380021224|ref|XP_003694471.1| PREDICTED: Fanconi anemia group J protein homolog, partial [Apis
florea]
Length = 878
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 51 IEPVVSQGPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTS 110
IE V H E N W + ++ TL C+N G+ FS + +AR +IL S
Sbjct: 555 IESTVKDFKHMSE-----NAWISVKKCEQRVR-TLKLVCMNPGVAFSPLALNARCIILAS 608
Query: 111 GTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQAL 170
GTL P SFQSELGT F L HVI K+Q V+ + +GP I L+A
Sbjct: 609 GTLTPTASFQSELGTSFTHVLNTGHVIPKEQ-----------VYATCIPKGPNGILLKAN 657
Query: 171 YK 172
Y+
Sbjct: 658 YQ 659
>gi|393908189|gb|EJD74948.1| CBR-DOG-1 protein [Loa loa]
Length = 979
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
+ + FWC+ L ++D + RSVIL SGTL+P D+F++ELGT F ++E N +I +Q
Sbjct: 650 RVAISFWCMRPSLAYTDAFKGCRSVILASGTLSPTDTFRTELGTTFHQEMEGNQIIPDEQ 709
Query: 142 VFIGVLGQG 150
+F V+ G
Sbjct: 710 IFAAVIPSG 718
>gi|320167785|gb|EFW44684.1| DEAH helicase isoform 6 [Capsaspora owczarzaki ATCC 30864]
Length = 1319
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 77 TPMSIKYTLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANH 135
P + TL FWC + G D+ + RS+ILTSGTL+P+ SF +E+ FPI LE H
Sbjct: 461 APSAAGRTLSFWCFSPGFAMRDLTKIGVRSIILTSGTLSPLASFGAEMQLPFPITLENPH 520
Query: 136 VIDKDQVFIGVLGQG 150
VI K Q++ GV+ G
Sbjct: 521 VISKSQLWCGVVSTG 535
>gi|301629712|ref|XP_002943978.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Xenopus (Silurana) tropicalis]
Length = 688
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G D +R+ R VILTSGTL P+ SF E+ FP+ LE HVIDK Q++
Sbjct: 50 LSYWCFSPGYTMHDLVRQGVRCVILTSGTLCPLSSFTMEMQIPFPVSLENPHVIDKHQIW 109
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 110 VGIVPRG 116
>gi|412990074|emb|CCO20716.1| predicted protein [Bathycoccus prasinos]
Length = 1018
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 87 FWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGV 146
WCL + F + E AR VILTSGTL+P S + ELG FPIK++A HV+ +Q+F+
Sbjct: 716 LWCLRPAVAFERVAEKARCVILTSGTLSPTSSLEGELGVPFPIKVDAPHVVPNNQIFVES 775
Query: 147 L 147
L
Sbjct: 776 L 776
>gi|391337516|ref|XP_003743113.1| PREDICTED: Fanconi anemia group J protein-like [Metaseiulus
occidentalis]
Length = 567
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%)
Query: 80 SIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDK 139
S + TL +CLN + DIR+ S+++ SGTL+P+ SF+ ELG FP L NHV+ +
Sbjct: 467 SPEITLQIFCLNPAVALVDIRDKLHSLVVASGTLSPMKSFECELGIPFPFSLSLNHVVRE 526
Query: 140 DQVFIGVLGQGQK 152
+Q+ VL +G K
Sbjct: 527 EQMLACVLAKGPK 539
>gi|312076541|ref|XP_003140907.1| hypothetical protein LOAG_05322 [Loa loa]
Length = 704
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
+ + FWC+ L ++D + RSVIL SGTL+P D+F++ELGT F ++E N +I +Q
Sbjct: 375 RVAISFWCMRPSLAYTDAFKGCRSVILASGTLSPTDTFRTELGTTFHQEMEGNQIIPDEQ 434
Query: 142 VFIGVLGQG 150
+F V+ G
Sbjct: 435 IFAAVIPSG 443
>gi|426392493|ref|XP_004062584.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 3
[Gorilla gorilla gorilla]
Length = 1301
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + IR+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMRELIRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
>gi|426392491|ref|XP_004062583.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 2
[Gorilla gorilla gorilla]
Length = 1244
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + IR+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 477 LSYWCFSPGHSMRELIRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 536
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 537 VGVVPRG 543
>gi|431894622|gb|ELK04422.1| Regulator of telomere elongation helicase 1 [Pteropus alecto]
Length = 1198
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
L +WC + G + +R+ R++ILTSGTLAPV SF E+ FP+ LE HVIDK Q+
Sbjct: 463 VLSYWCFSPGYSMRELVRQGVRTLILTSGTLAPVSSFALEMQIPFPVSLENPHVIDKHQI 522
Query: 143 FIGVLGQG 150
++G++ +G
Sbjct: 523 WVGIVPKG 530
>gi|426392489|ref|XP_004062582.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Gorilla gorilla gorilla]
Length = 1220
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + IR+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMRELIRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
>gi|327284022|ref|XP_003226738.1| PREDICTED: regulator of telomere elongation helicase 1-like [Anolis
carolinensis]
Length = 1142
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTL+P+ SF E+ FPI LE HVIDK QV+
Sbjct: 428 LSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTMEMQIPFPICLENPHVIDKHQVW 487
Query: 144 IGVLGQG 150
+G+L +G
Sbjct: 488 VGILPKG 494
>gi|307177078|gb|EFN66346.1| Fanconi anemia group J protein [Camponotus floridanus]
Length = 772
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
+ C+N +VF+ + RSVI+ SGTL P+ SFQSELGT+FP + +H+I KDQV++
Sbjct: 463 MKLLCMNPAVVFAPLARIVRSVIVASGTLTPITSFQSELGTKFPHVVNPDHIISKDQVYV 522
Query: 145 GVLGQG 150
+ +G
Sbjct: 523 RCIPRG 528
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETEGESNRWYRKDRTPMR 49
MTILSSR++TCI K+ +N N+LC+EL + + Y D++ R
Sbjct: 155 MTILSSRQYTCIQ----KSNKNKNELCKELLDPLKSTKCLYYNDQSKKR 199
>gi|119595650|gb|EAW75244.1| hCG22751, isoform CRA_e [Homo sapiens]
Length = 1400
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
>gi|7012929|gb|AAF35243.1| helicase-like protein NHL [Homo sapiens]
Length = 1400
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
>gi|374674404|dbj|BAA83040.3| KIAA1088 protein, partial [Homo sapiens]
Length = 1400
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
>gi|168269672|dbj|BAG09963.1| tumor necrosis factor receptor superfamily member 6B precursor
[synthetic construct]
Length = 1400
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
>gi|402881970|ref|XP_003904529.1| PREDICTED: regulator of telomere elongation helicase 1 [Papio
anubis]
Length = 1301
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMRELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
>gi|441639260|ref|XP_004090200.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Nomascus leucogenys]
Length = 1342
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 477 LSYWCFSPGHSMRELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 536
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 537 VGVVPRG 543
>gi|194379638|dbj|BAG63785.1| unnamed protein product [Homo sapiens]
Length = 1243
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 477 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 536
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 537 VGVVPRG 543
>gi|119595646|gb|EAW75240.1| hCG22751, isoform CRA_b [Homo sapiens]
gi|119595651|gb|EAW75245.1| hCG22751, isoform CRA_b [Homo sapiens]
Length = 1300
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
>gi|7706541|ref|NP_057518.1| regulator of telomere elongation helicase 1 isoform 1 [Homo
sapiens]
gi|229462743|sp|Q9NZ71.2|RTEL1_HUMAN RecName: Full=Regulator of telomere elongation helicase 1; AltName:
Full=Novel helicase-like
gi|6969265|gb|AAF33687.1|AF217795_1 helicase-like protein NHL [Homo sapiens]
gi|119595644|gb|EAW75238.1| hCG22751, isoform CRA_a [Homo sapiens]
gi|119595645|gb|EAW75239.1| hCG22751, isoform CRA_a [Homo sapiens]
gi|119595647|gb|EAW75241.1| hCG22751, isoform CRA_a [Homo sapiens]
Length = 1219
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
>gi|323510681|ref|NP_116575.3| regulator of telomere elongation helicase 1 isoform 2 [Homo
sapiens]
Length = 1243
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 477 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 536
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 537 VGVVPRG 543
>gi|444517021|gb|ELV11342.1| Regulator of telomere elongation helicase 1 [Tupaia chinensis]
Length = 1288
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTLAPV SF E+ FP+ LE HVIDK Q++
Sbjct: 492 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPVSSFALEMQVPFPVCLENPHVIDKHQIW 551
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 552 VGVVPKG 558
>gi|432092892|gb|ELK25255.1| Fanconi anemia group J protein [Myotis davidii]
Length = 1114
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 95 VFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQK 152
FSDI +++LTSGTL+P+ SF SELG F I+LEANHVI+ QV++G +G G K
Sbjct: 467 AFSDINGKVWTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPK 524
>gi|297259357|ref|XP_001113864.2| PREDICTED: regulator of telomere elongation helicase 1-like [Macaca
mulatta]
Length = 1347
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 499 LSYWCFSPGHSMRELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 558
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 559 VGVVPRG 565
>gi|170579413|ref|XP_001894820.1| BRCA1-binding helicase-like protein BACH1 [Brugia malayi]
gi|158598443|gb|EDP36331.1| BRCA1-binding helicase-like protein BACH1, putative [Brugia malayi]
Length = 962
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
+ + FWC+ L + D + RSVIL SGTL+P D+F++ELGT F ++E N +I +Q
Sbjct: 651 RVAISFWCMRPSLAYIDAFKGCRSVILASGTLSPTDTFRTELGTTFQQEMEGNQIIPDEQ 710
Query: 142 VFIGVLGQG 150
+F V+ G
Sbjct: 711 IFAAVIPSG 719
>gi|194388328|dbj|BAG65548.1| unnamed protein product [Homo sapiens]
Length = 996
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 230 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 289
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 290 VGVVPRG 296
>gi|321469304|gb|EFX80285.1| hypothetical protein DAPPUDRAFT_128417 [Daphnia pulex]
Length = 892
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G D + E AR +ILTSGTL+P++SF +EL FP+ LE H+I Q
Sbjct: 449 LSYWCFSPGFGMRDLVEEGARCLILTSGTLSPLNSFAAELQVPFPVTLENPHIISSSQ-- 506
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
V +GV+ GP L + YKN
Sbjct: 507 ---------VLVGVVTHGPDGTQLDSSYKN 527
>gi|397477198|ref|XP_003809965.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Pan paniscus]
Length = 1090
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G ++ R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 477 LSYWCFSPGHSMRELLRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 536
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 537 VGVVPRG 543
>gi|194387848|dbj|BAG61337.1| unnamed protein product [Homo sapiens]
Length = 1004
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q+
Sbjct: 452 VLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQI 511
Query: 143 FIGVLGQG 150
++GV+ +G
Sbjct: 512 WVGVVPRG 519
>gi|449486421|ref|XP_002193824.2| PREDICTED: regulator of telomere elongation helicase 1 [Taeniopygia
guttata]
Length = 1107
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL +WC + G + +R+ R++ILTSGTL+P+ SF E+ FP+ LE HVIDK Q+
Sbjct: 453 TLSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTMEMQIPFPVCLENPHVIDKHQL 512
Query: 143 FIGVLGQG 150
++G++ +G
Sbjct: 513 WVGIIPKG 520
>gi|119595649|gb|EAW75243.1| hCG22751, isoform CRA_d [Homo sapiens]
Length = 1023
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q+
Sbjct: 452 VLSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQI 511
Query: 143 FIGVLGQG 150
++GV+ +G
Sbjct: 512 WVGVVPRG 519
>gi|395506651|ref|XP_003757644.1| PREDICTED: regulator of telomere elongation helicase 1 [Sarcophilus
harrisii]
Length = 1361
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + I++ R++ILTSGTLAP+ SF E+ FP+ LE HVIDK Q++
Sbjct: 453 LSYWCFSPGFSMQELIQQEVRTIILTSGTLAPISSFTMEMQIPFPVCLENPHVIDKHQIW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPKG 519
>gi|397477200|ref|XP_003809966.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 2
[Pan paniscus]
Length = 1401
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G ++ R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMRELLRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
>gi|410055436|ref|XP_003953846.1| PREDICTED: regulator of telomere elongation helicase 1 [Pan
troglodytes]
Length = 1301
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G ++ R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMRELLRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
>gi|326932020|ref|XP_003212120.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Meleagris gallopavo]
Length = 1136
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL +WC + G + +R+ R++ILTSGTL+P+ SF E+ FP+ LE HVIDK Q+
Sbjct: 434 TLSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTMEMQIPFPVLLENPHVIDKRQL 493
Query: 143 FIGVLGQG 150
++G++ +G
Sbjct: 494 WVGIIPKG 501
>gi|281208566|gb|EFA82742.1| DEAD/DEAH box helicase [Polysphondylium pallidum PN500]
Length = 997
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 10/93 (10%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
K+ W +N + F I E+ RSVILTSGTL+P+ SF SELG FPI E ++ D
Sbjct: 682 KHVFGIWSMNPRVAFKSISENTRSVILTSGTLSPLSSFASELGAPFPITAELGNLEDIT- 740
Query: 142 VFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
++V+IG LG G N L A +K++
Sbjct: 741 ---------KRVWIGTLGFGANNTKLDATFKSS 764
>gi|348685651|gb|EGZ25466.1| hypothetical protein PHYSODRAFT_485995 [Phytophthora sojae]
Length = 1080
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 63 EYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQS 121
E + R + R + ++WC + G+ F +I + +VILTSGTL+P+D+
Sbjct: 406 ERPSNAGRLFNGGRNKKTTTRVFNYWCFHPGVAFREICANNVHNVILTSGTLSPLDTTVK 465
Query: 122 ELGTQFPIKLEANHVIDKDQVF 143
ELG FP++LE NHV+D DQV+
Sbjct: 466 ELGIDFPVRLENNHVVDADQVW 487
>gi|17507137|ref|NP_493618.1| Protein DOG-1 [Caenorhabditis elegans]
gi|3876642|emb|CAB04262.1| Protein DOG-1 [Caenorhabditis elegans]
Length = 983
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 11/93 (11%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
K T+ WC++ L F D RS++L SGTL P+D+ ++ELG +F ++E + VI+KD
Sbjct: 659 KTTISLWCMSPALSFFDAFNETRSIVLASGTLCPMDTLKTELGMEFKQQVEGDQVINKDN 718
Query: 142 VFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
+F VL IG G +Q Y+NT
Sbjct: 719 IFAAVLP------IGPFGNR-----IQCTYRNT 740
>gi|363741498|ref|XP_417435.3| PREDICTED: regulator of telomere elongation helicase 1 [Gallus
gallus]
Length = 1220
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL +WC + G + +R+ R++ILTSGTL+P+ SF E+ FP+ LE HVIDK Q+
Sbjct: 428 TLSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSFTMEMQIPFPVLLENPHVIDKRQL 487
Query: 143 FIGVLGQG 150
++G++ +G
Sbjct: 488 WVGIIPKG 495
>gi|338719447|ref|XP_001492963.3| PREDICTED: regulator of telomere elongation helicase 1-like [Equus
caballus]
Length = 1344
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTLAPV SF E+ FP+ LE HVIDK Q++
Sbjct: 454 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPVSSFALEMQIPFPVCLENPHVIDKHQIW 513
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 514 VGVVPKG 520
>gi|410219260|gb|JAA06849.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
gi|410263662|gb|JAA19797.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
Length = 1220
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G ++ R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMRELLRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
>gi|332858954|ref|XP_003317100.1| PREDICTED: regulator of telomere elongation helicase 1 isoform 1
[Pan troglodytes]
gi|410301716|gb|JAA29458.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
gi|410341613|gb|JAA39753.1| regulator of telomere elongation helicase 1 [Pan troglodytes]
Length = 1220
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G ++ R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMRELLRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
>gi|410055438|ref|XP_003953847.1| PREDICTED: regulator of telomere elongation helicase 1 [Pan
troglodytes]
Length = 997
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G ++ R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 230 LSYWCFSPGHSMRELLRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 289
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 290 VGVVPRG 296
>gi|410953370|ref|XP_003983344.1| PREDICTED: regulator of telomere elongation helicase 1 [Felis
catus]
Length = 1477
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTLAPV SF EL FP+ LE HVIDK Q++
Sbjct: 451 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPVSSFALELQIPFPVCLENPHVIDKHQIW 510
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 511 VGIVPKG 517
>gi|260789809|ref|XP_002589937.1| hypothetical protein BRAFLDRAFT_231064 [Branchiostoma floridae]
gi|229275123|gb|EEN45948.1| hypothetical protein BRAFLDRAFT_231064 [Branchiostoma floridae]
Length = 823
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 12/91 (13%)
Query: 84 TLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL +WC + G D+ RS+ILTSGTL+P++SF +E+ FP+ LE HVI++ Q
Sbjct: 468 TLSYWCFSPGHAMQDLANHGVRSIILTSGTLSPLESFTAEMHIDFPVHLENPHVIERHQ- 526
Query: 143 FIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
V++G++ +GP + L + Y+N
Sbjct: 527 ----------VWLGMVTKGPDGVRLNSSYEN 547
>gi|432094035|gb|ELK25827.1| Regulator of telomere elongation helicase 1 [Myotis davidii]
Length = 1389
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R+++LTSGTLAPV SF E+ FP+ LE HVIDK Q++
Sbjct: 495 LSYWCFSPGCCMRELVRQGVRTLLLTSGTLAPVSSFALEMQIPFPVCLENPHVIDKHQIW 554
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 555 VGIVPRG 561
>gi|358341159|dbj|GAA28295.2| regulator of telomere elongation helicase 1 [Clonorchis sinensis]
Length = 1325
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 84 TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL +WCL+ G D I+E R VILTSGTL P++ QSEL FPI L+ HVI +QV
Sbjct: 367 TLSYWCLSPGRAMQDLIKERVRCVILTSGTLYPIEPIQSELHMNFPISLQNPHVIKPEQV 426
Query: 143 FIGVLGQGQ 151
+ V+ +G+
Sbjct: 427 RLAVITRGK 435
>gi|390462826|ref|XP_002747823.2| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Callithrix jacchus]
Length = 1823
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 586 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 645
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 646 VGVVPRG 652
>gi|290987559|ref|XP_002676490.1| predicted protein [Naegleria gruberi]
gi|284090092|gb|EFC43746.1| predicted protein [Naegleria gruberi]
Length = 640
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 84 TLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL FWC N GL ++ +E S ILTSGTL+P++SF ELG FPI+LE HV++++Q+
Sbjct: 326 TLSFWCFNPGLSMQNLAKEGPLSFILTSGTLSPMESFAYELGLSFPIRLENPHVVNREQI 385
Query: 143 FI 144
+
Sbjct: 386 CV 387
>gi|307108452|gb|EFN56692.1| hypothetical protein CHLNCDRAFT_57565 [Chlorella variabilis]
Length = 1523
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVID 138
+ + WC+N + F + ++A SV+LTSGTLAP++ F SELGT F I LEA HV+D
Sbjct: 564 FKMCLWCMNPAVAFRPVAQAAHSVVLTSGTLAPLEGFASELGTPFAITLEAPHVVD 619
>gi|229891620|sp|P0C928.1|RTEL1_DANRE RecName: Full=Regulator of telomere elongation helicase 1
Length = 1177
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G ++ R+ R +ILTSGTL+P+ SF E+ FP+ LE HVI +DQ+F
Sbjct: 452 LSYWCFSPGFSMQELLRQEVRCIILTSGTLSPLSSFTCEMQIPFPVSLENPHVIQRDQIF 511
Query: 144 IGVLGQG 150
+ ++ +G
Sbjct: 512 VSIIEKG 518
>gi|119595652|gb|EAW75246.1| hCG22751, isoform CRA_f [Homo sapiens]
Length = 865
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 18 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 77
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 78 VGVVPRG 84
>gi|119595648|gb|EAW75242.1| hCG22751, isoform CRA_c [Homo sapiens]
Length = 784
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 18 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 77
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 78 VGVVPRG 84
>gi|302129716|ref|NP_001013328.2| regulator of telomere elongation helicase 1 [Danio rerio]
Length = 1177
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G ++ R+ R +ILTSGTL+P+ SF E+ FP+ LE HVI +DQ+F
Sbjct: 452 LSYWCFSPGFSMQELLRQEVRCIILTSGTLSPLSSFTCEMQIPFPVSLENPHVIQRDQIF 511
Query: 144 IGVLGQG 150
+ ++ +G
Sbjct: 512 VSIIEKG 518
>gi|402594364|gb|EJW88290.1| hypothetical protein WUBG_00802 [Wuchereria bancrofti]
Length = 961
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
+ + FWC+ + + D + RSVIL SGTL+P D+F++ELGT F ++E N +I +Q
Sbjct: 632 RVAISFWCMRPSVAYLDAFKGCRSVILASGTLSPTDTFRTELGTTFQQEMEGNQIIPDEQ 691
Query: 142 VFIGVLGQG 150
+F V+ G
Sbjct: 692 IFAAVIPSG 700
>gi|401415594|ref|XP_003872292.1| putative helicase [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488516|emb|CBZ23762.1| putative helicase [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 953
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
TL FW L++ + + SV+LTSGTL+P+D F +ELG +F ++L+ NHVI DQV
Sbjct: 416 TLGFWELDNTRLMRQVVSPLHSVLLTSGTLSPLDQFAAELGMEFQVRLKGNHVIQPDQVL 475
Query: 144 IGVLGQG 150
GVL +G
Sbjct: 476 GGVLCRG 482
>gi|12324581|gb|AAG52242.1|AC011717_10 hypothetical protein; 30600-24965 [Arabidopsis thaliana]
Length = 959
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 60 HADEYQG-ESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVD 117
HAD Y+ E N D + TL +WC + G+ DI ++ S+ILTSGTL+P+D
Sbjct: 436 HADVYRELEQNS---TDVMKGKVSRTLSWWCFSPGITMLDIAQKGVGSIILTSGTLSPMD 492
Query: 118 SFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFI 155
S EL FPI+LE HVI +Q++ GV+ G ++
Sbjct: 493 SLAQELKLDFPIRLENPHVISSNQLWAGVVSTGPSGYV 530
>gi|42563365|ref|NP_178113.3| regulator of telomere elongation helicase 1 [Arabidopsis thaliana]
gi|332198212|gb|AEE36333.1| regulator of telomere elongation helicase 1 [Arabidopsis thaliana]
Length = 1040
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 60 HADEYQGESNRWYRKDRTPMS--IKYTLHFWCLNSGLVFSDI-RESARSVILTSGTLAPV 116
HAD Y+ + M + TL +WC + G+ DI ++ S+ILTSGTL+P+
Sbjct: 436 HADVYRVHVQELEQNSTDVMKGKVSRTLSWWCFSPGITMLDIAQKGVGSIILTSGTLSPM 495
Query: 117 DSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFI 155
DS EL FPI+LE HVI +Q++ GV+ G ++
Sbjct: 496 DSLAQELKLDFPIRLENPHVISSNQLWAGVVSTGPSGYV 534
>gi|449529467|ref|XP_004171721.1| PREDICTED: regulator of telomere elongation helicase 1-like,
partial [Cucumis sativus]
Length = 695
Score = 68.9 bits (167), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL +WC N G+ ++ S+ILTSGTL+P+DSF EL FPI+LE HVI +Q+
Sbjct: 414 TLSWWCFNPGIALEAFPKKEVGSIILTSGTLSPLDSFAQELKLDFPIRLENPHVISSNQI 473
Query: 143 FIGVLGQG 150
+ GV+ G
Sbjct: 474 WAGVVSVG 481
>gi|301111400|ref|XP_002904779.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095109|gb|EEY53161.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1058
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 49/72 (68%), Gaps = 3/72 (4%)
Query: 73 RKDRTPMSIKYTLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKL 131
RK++T + ++WC + G+ F +I + +VILTSGTL+P+D+ ELG FP++L
Sbjct: 402 RKNKT--TTTRVFNYWCFHPGVAFREICTNNVHNVILTSGTLSPLDTTVKELGIDFPVRL 459
Query: 132 EANHVIDKDQVF 143
E NHV+D DQV+
Sbjct: 460 ENNHVVDADQVW 471
>gi|297842871|ref|XP_002889317.1| hypothetical protein ARALYDRAFT_477264 [Arabidopsis lyrata subsp.
lyrata]
gi|297335158|gb|EFH65576.1| hypothetical protein ARALYDRAFT_477264 [Arabidopsis lyrata subsp.
lyrata]
Length = 1016
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 60 HADEYQGESNRWYRKDRTPMS--IKYTLHFWCLNSGLVFSDI-RESARSVILTSGTLAPV 116
HAD Y+ + M + TL +WC + G+ DI ++ S+ILTSGTL+P+
Sbjct: 419 HADVYRVHVQELEQNSTDVMKGKVSRTLSWWCFSPGITMLDIAKKGVGSIILTSGTLSPM 478
Query: 117 DSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFI 155
DS EL FP++LE HVI +Q++ GV+ G ++
Sbjct: 479 DSLAQELKLDFPVRLENPHVISSNQLWAGVVSTGPSGYV 517
>gi|351714866|gb|EHB17785.1| Regulator of telomere elongation helicase 1, partial
[Heterocephalus glaber]
Length = 1184
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
L +WC + G ++ R+ R+VILTSGTLAP+ SF E+ FP+ LE HVIDK Q+
Sbjct: 446 VLSYWCFSPGHSMQELLRQGVRTVILTSGTLAPLSSFVLEMQIPFPVCLENPHVIDKHQL 505
Query: 143 FIGVLGQG 150
++GV+ +G
Sbjct: 506 WVGVIPRG 513
>gi|110741966|dbj|BAE98923.1| hypothetical protein [Arabidopsis thaliana]
Length = 652
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Query: 60 HADEYQGESNRWYRKDRTPMS--IKYTLHFWCLNSGLVFSDI-RESARSVILTSGTLAPV 116
HAD Y+ + M + TL +WC + G+ DI ++ S+ILTSGTL+P+
Sbjct: 391 HADVYRVHVQELEQNSTDVMKGKVSRTLSWWCFSPGITMLDIAQKGVGSIILTSGTLSPM 450
Query: 117 DSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFI 155
DS EL FPI+LE HVI +Q++ GV+ G ++
Sbjct: 451 DSLAQELKLDFPIRLENPHVISSNQLWAGVVSTGPSGYV 489
>gi|449448190|ref|XP_004141849.1| PREDICTED: regulator of telomere elongation helicase 1-like
[Cucumis sativus]
Length = 1054
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL +WC N G+ ++ S+ILTSGTL+P+DSF EL FPI+LE HVI +Q+
Sbjct: 414 TLSWWCFNPGIALEAFPKKEVGSIILTSGTLSPLDSFAQELKLDFPIRLENPHVISSNQI 473
Query: 143 FIGVLGQG 150
+ GV+ G
Sbjct: 474 WAGVVSVG 481
>gi|403282703|ref|XP_003932780.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 [Saimiri boliviensis boliviensis]
Length = 1604
Score = 68.6 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMRELVRQGVRALILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
>gi|145345288|ref|XP_001417148.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577375|gb|ABO95441.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 938
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Query: 89 CLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLG 148
C+ + F + E ARSVI+TSGTL+P+++F++EL +FP K+EA HV+ D V++ V
Sbjct: 523 CMKPSVAFHAVAEKARSVIITSGTLSPMNTFEAELAEKFPTKIEAPHVVPNDHVYVEVTS 582
Query: 149 Q-GQKVFIGVLG--QGPQ 163
G+ + G QGP+
Sbjct: 583 AIGEVTYKATDGHVQGPK 600
>gi|308812532|ref|XP_003083573.1| helicase-related (ISS) [Ostreococcus tauri]
gi|116055454|emb|CAL58122.1| helicase-related (ISS) [Ostreococcus tauri]
Length = 1048
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 56/98 (57%), Gaps = 10/98 (10%)
Query: 54 VVSQGPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSD-IRESARSVILTSGT 112
V GP D ++ R+ + P TL +WC GL + I ++ S +L SGT
Sbjct: 439 VTRVGPDTDNFKTSQ----RQRQGP-----TLSYWCFFPGLCLKELIEKNVGSFLLASGT 489
Query: 113 LAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
L+P++SF SEL +FP++LE HVI ++Q++ GVL G
Sbjct: 490 LSPMESFSSELAMEFPVRLENPHVIQRNQIWGGVLTHG 527
>gi|241638389|ref|XP_002409109.1| hypothetical protein IscW_ISCW019247 [Ixodes scapularis]
gi|215501299|gb|EEC10793.1| hypothetical protein IscW_ISCW019247 [Ixodes scapularis]
Length = 805
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 40 WYRKDRTPMRGIEPVVSQGPHADEYQGESNRWYRKDRT-PMSIKYTLHFWCLNSGLVFSD 98
+YR + M V + + W+ K S +TL FWCLN + SD
Sbjct: 268 FYRSNMKYMSDFRAAVVKSVSKRRRSEAAGGWHTKSSAGNNSWTHTLSFWCLNPAVAMSD 327
Query: 99 IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKD 140
I++ S+I+ SGTL+P++SF+SEL F +L+A HVI D
Sbjct: 328 IKDKVHSLIVASGTLSPMESFESELDMPFKSQLQAKHVIPPD 369
>gi|255574578|ref|XP_002528200.1| regulator of telomere elongation helicase 1 rtel1, putative
[Ricinus communis]
gi|223532412|gb|EEF34207.1| regulator of telomere elongation helicase 1 rtel1, putative
[Ricinus communis]
Length = 1049
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL +WC N G+ + R S+ILTSGTL+P+DSF EL FPI+LE HVI Q+
Sbjct: 415 TLSWWCFNPGVAMEEFSRMGVCSIILTSGTLSPMDSFAQELKLDFPIRLENPHVISSKQI 474
Query: 143 FIGVLGQG 150
+ GV+ G
Sbjct: 475 WAGVVPVG 482
>gi|156379412|ref|XP_001631451.1| predicted protein [Nematostella vectensis]
gi|156218492|gb|EDO39388.1| predicted protein [Nematostella vectensis]
Length = 1082
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 79 MSIKYTLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVI 137
M +H+WC + G D+ + SVILTSGTL+P++SF +E+ FPI+LE HVI
Sbjct: 448 MRTMIMIHYWCFSPGHAMKDLMSQGVSSVILTSGTLSPLNSFTAEMQIPFPIRLENPHVI 507
Query: 138 DKDQVFIGVLGQG 150
+K Q+ + V+ +
Sbjct: 508 EKHQMMVAVVTKA 520
>gi|332025865|gb|EGI66021.1| Fanconi anemia group J protein-like protein [Acromyrmex echinatior]
Length = 653
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 69 NRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP 128
N W+ + ++ T+ C+N +VF + RSVIL SGTL P S+QSELGT+F
Sbjct: 337 NDWFSTTKKLTKVR-TMILKCMNPAIVFEPLAHEVRSVILASGTLTPTVSYQSELGTKFS 395
Query: 129 IKLEANHVIDKDQVFIGVLGQG 150
+ +H+I K+Q++I + QG
Sbjct: 396 YIINPDHIIPKNQLYIRYIPQG 417
>gi|383856223|ref|XP_003703609.1| PREDICTED: Fanconi anemia group J protein-like [Megachile
rotundata]
Length = 935
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 11/89 (12%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
TL C+N G++F + S R +IL SGTL P S+QSEL T F L A HVI K+Q
Sbjct: 631 TLKLICMNPGVIFEPLSRSVRCIILASGTLTPTASYQSELNTTFSHILNAGHVIPKEQ-- 688
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
V+ + +GP I L+A Y+
Sbjct: 689 ---------VYATCISKGPNGIQLRANYQ 708
>gi|440797062|gb|ELR18157.1| DNA repair helicase (rad3) subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 1026
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 12/87 (13%)
Query: 88 WCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGV 146
WC N GL ++ + R++ILTSGTL+P+ S +EL FPI+LE +HVI
Sbjct: 459 WCFNPGLAMLELAAQGVRNIILTSGTLSPLASTAAELKIPFPIRLENSHVI--------- 509
Query: 147 LGQGQKVFIGVLGQGPQNIPLQALYKN 173
Q +V++GVL GP + PL + +K
Sbjct: 510 --QPSQVWVGVLSNGPSDYPLNSSFKT 534
>gi|341901524|gb|EGT57459.1| CBN-DOG-1 protein [Caenorhabditis brenneri]
Length = 987
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 18/119 (15%)
Query: 63 EYQGESNRWYRKDRTPMS-------IKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
E + + + W D +P K ++ WC++ L F D RS+IL SGTL P
Sbjct: 637 EAENDGDEWIDTDSSPTGHKAIFEGCKTSVSLWCMSPALSFFDAFSETRSIILASGTLCP 696
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNT 174
+D+ ++ELG +F ++E + VI D +F VL GP +Q ++NT
Sbjct: 697 MDTLKTELGMEFKQQVEGDQVISPDN-----------IFAAVLPIGPHGNRVQCTFRNT 744
>gi|398019061|ref|XP_003862695.1| helicase, putative [Leishmania donovani]
gi|322500925|emb|CBZ36002.1| helicase, putative [Leishmania donovani]
Length = 953
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
TL FW L++ + + SV+LTSGTL+P+D F +ELG +F ++L+ NHVI DQV
Sbjct: 416 TLGFWELDNTRLMRQVVLPLHSVLLTSGTLSPLDQFAAELGMEFQVRLKGNHVIQPDQVL 475
Query: 144 IGVLGQG 150
GVL +G
Sbjct: 476 GGVLCRG 482
>gi|146093363|ref|XP_001466793.1| putative helicase [Leishmania infantum JPCM5]
gi|134071156|emb|CAM69841.1| putative helicase [Leishmania infantum JPCM5]
Length = 953
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
TL FW L++ + + SV+LTSGTL+P+D F +ELG +F ++L+ NHVI DQV
Sbjct: 416 TLGFWELDNTRLMRQVVLPLHSVLLTSGTLSPLDQFAAELGMEFQVRLKGNHVIQPDQVL 475
Query: 144 IGVLGQG 150
GVL +G
Sbjct: 476 GGVLCRG 482
>gi|167526369|ref|XP_001747518.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773964|gb|EDQ87598.1| predicted protein [Monosiga brevicollis MX1]
Length = 1029
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 12/91 (13%)
Query: 84 TLHFWCLNSGLVF-SDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL WC + S + E +++ILTSGTLAP++SF++EL T FP+ LE H+I
Sbjct: 368 TLSLWCFSPAFAMKSLMAEGIKTLILTSGTLAPLNSFKAELMTDFPVMLENPHII----- 422
Query: 143 FIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
G++V+ GVL GP N L + Y+N
Sbjct: 423 ------TGKQVWAGVLPVGPSNARLISNYEN 447
>gi|380013392|ref|XP_003690744.1| PREDICTED: regulator of telomere elongation helicase 1 homolog,
partial [Apis florea]
Length = 970
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 67 ESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGT 125
+++ W +K P + +++WC + G +++ R++ILTSGTL+P+ F SELG
Sbjct: 435 QNDVWEKKKILPKNEGKIINYWCFSPGFSMQQLKDQGTRAIILTSGTLSPLKPFISELGI 494
Query: 126 QFPIKLEANHVIDKDQVFIGVLGQG 150
++LE +H++ +DQ+ +G+L +G
Sbjct: 495 PIEVQLENSHIVKEDQICVGILSRG 519
>gi|328783139|ref|XP_396001.4| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Apis mellifera]
Length = 976
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+++WC + G ++ + AR++ILTSGTL+P+ F SELG ++LE +H++ +DQ+
Sbjct: 452 INYWCFSPGFSMQQLKNQGARAIILTSGTLSPLKPFISELGIPIEVQLENSHIVKEDQIC 511
Query: 144 IGVLGQG 150
+G+L QG
Sbjct: 512 VGILSQG 518
>gi|332030654|gb|EGI70342.1| Regulator of telomere elongation helicase 1-like protein
[Acromyrmex echinatior]
Length = 976
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 57/111 (51%), Gaps = 17/111 (15%)
Query: 67 ESNRWYRKD-----RTPMSIKYTLHFWCLNSGLVFSDIRESA-RSVILTSGTLAPVDSFQ 120
E + YR D +T + + +WC + G + E RSV+LTSGTL+P+ F
Sbjct: 428 EQKKNYRNDVWESKKTTKTDGKLISYWCFSPGFGMEQMVEQGIRSVVLTSGTLSPLKPFI 487
Query: 121 SELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALY 171
SELG ++LE H++ K+Q V +GVL QGP N PL + Y
Sbjct: 488 SELGIPIAVQLENPHIVTKEQ-----------VCVGVLSQGPDNHPLNSSY 527
>gi|412985226|emb|CCO20251.1| regulator of telomere elongation helicase 1 [Bathycoccus prasinos]
Length = 1313
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 58 GPHADEYQGESNRWYRK-----DRTPMSIKYTLHFWCLNSGLVFSDIRE-SARSVILTSG 111
GP +E+ S+ W +K + ++ T+ FWC+ G++ +++ E +S++L SG
Sbjct: 535 GPPEEEF---SSTWNKKNDDGRENKRLAKGPTMSFWCMVPGVIVNELCELGVKSLLLASG 591
Query: 112 TLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
TL+P+DSF SEL FP++LE HVI ++ V+ G +G
Sbjct: 592 TLSPMDSFASELRAPFPVRLENPHVIPQENVWAGAFLKG 630
>gi|302829651|ref|XP_002946392.1| hypothetical protein VOLCADRAFT_30322 [Volvox carteri f.
nagariensis]
gi|300268138|gb|EFJ52319.1| hypothetical protein VOLCADRAFT_30322 [Volvox carteri f.
nagariensis]
Length = 700
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 84 TLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL +WC G+ F + RS +LTSGTL+P+DSF EL F ++LE HVI+ Q
Sbjct: 387 TLSYWCFIPGMAFRRLAALRLRSFLLTSGTLSPMDSFAGELQIPFQVRLENPHVIEPSQ- 445
Query: 143 FIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
V++GVL GP PL + Y +
Sbjct: 446 ----------VWVGVLPTGPSGAPLNSTYAS 466
>gi|390352857|ref|XP_001196422.2| PREDICTED: regulator of telomere elongation helicase 1-like
[Strongylocentrotus purpuratus]
Length = 402
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 40/50 (80%)
Query: 101 ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
+ RS+ILTSGTLAP++SF+SEL FPI+LE HVIDK Q+ +GV+ +G
Sbjct: 7 QGVRSIILTSGTLAPLNSFKSELSIDFPIQLENPHVIDKHQMVVGVMTKG 56
>gi|307176988|gb|EFN66294.1| Regulator of telomere elongation helicase 1 [Camponotus floridanus]
Length = 978
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 12/88 (13%)
Query: 85 LHFWCLNSGLVFSDIRESA-RSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+ +WC + G + E RSVILTSGTL+P+ F SELG ++LE H++ K
Sbjct: 451 ISYWCFSPGFGMEQMVEQGIRSVILTSGTLSPLKPFISELGIPIAVQLENPHIVTK---- 506
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALY 171
Q+V +GVL QGP N PL + Y
Sbjct: 507 -------QQVCVGVLSQGPDNHPLNSSY 527
>gi|322781255|gb|EFZ10173.1| hypothetical protein SINV_12884 [Solenopsis invicta]
Length = 884
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 13/102 (12%)
Query: 71 WYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESA-RSVILTSGTLAPVDSFQSELGTQFPI 129
W K T K + +WC + G + E RSV+LTSGTL+P+ SF SELG +
Sbjct: 439 WESKKMTKTDGKL-ISYWCFSPGFGMEQMVEQGIRSVVLTSGTLSPLKSFISELGIPIAV 497
Query: 130 KLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALY 171
+LE H++ K Q V +G+L QGP N PL + Y
Sbjct: 498 QLENPHIVTKGQ-----------VCVGILSQGPDNHPLNSSY 528
>gi|355717481|gb|AES05950.1| regulator of telomere elongation helicase 1 [Mustela putorius furo]
Length = 1114
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RSVILTSGTLAPV S E+ FP+ LE HVI K Q++
Sbjct: 371 LSYWCFSPGHSMQELVRQGVRSVILTSGTLAPVSSLALEMQIPFPVCLENPHVISKQQIW 430
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 431 VGIVPKG 437
>gi|307197478|gb|EFN78712.1| Regulator of telomere elongation helicase 1 [Harpegnathos saltator]
Length = 963
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 12/88 (13%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+ +WC + G + + RSV+LTSGTL+P+ F SELG ++LE H++ K+Q
Sbjct: 450 ISYWCFSPGFGMQQMVEQGVRSVVLTSGTLSPLKPFISELGIPIAVQLENPHIVTKEQ-- 507
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALY 171
V +GVL QGP N PL + Y
Sbjct: 508 ---------VCVGVLSQGPDNHPLNSSY 526
>gi|401825484|ref|XP_003886837.1| RAD3-like DNA-binding helicase [Encephalitozoon hellem ATCC 50504]
gi|392997993|gb|AFM97856.1| RAD3-like DNA-binding helicase [Encephalitozoon hellem ATCC 50504]
Length = 678
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%)
Query: 76 RTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANH 135
R S K++ +FW L++G F RSV+L SGTL P SF SELG +F + A H
Sbjct: 384 RNSRSSKFSYNFWLLDAGYTFRSFVGKVRSVVLLSGTLTPFSSFSSELGHEFAHSIVAPH 443
Query: 136 VIDKDQVFIGVLGQGQ 151
+I + QVF+ + +G
Sbjct: 444 LITQKQVFVSCIKKGH 459
>gi|389594205|ref|XP_003722349.1| putative helicase [Leishmania major strain Friedlin]
gi|321438847|emb|CBZ12607.1| putative helicase [Leishmania major strain Friedlin]
Length = 953
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 44/67 (65%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
TL FW L++ + + SV+LTSGTL+P+D F +ELG +F ++L+ HVI DQV
Sbjct: 416 TLGFWELDNTRLMRQVVSPLHSVLLTSGTLSPLDQFAAELGMEFQVRLKGKHVIQADQVL 475
Query: 144 IGVLGQG 150
GVL +G
Sbjct: 476 GGVLCRG 482
>gi|414881660|tpg|DAA58791.1| TPA: hypothetical protein ZEAMMB73_410850, partial [Zea mays]
Length = 941
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 16/89 (17%)
Query: 56 SQGPHAD--EYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSD-IRESARSVILTSGT 112
SQ H D ++ G+S+R TL +WC N GL + ++ RS+ILTSGT
Sbjct: 414 SQQTHGDALKFLGKSSR-------------TLSWWCFNPGLAMEEFLKLGVRSIILTSGT 460
Query: 113 LAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
L+P+DS EL +FP++LE HVI DQ
Sbjct: 461 LSPLDSLAMELNLEFPVRLENPHVISSDQ 489
>gi|403341333|gb|EJY69968.1| Regulator of telomere elongation helicase 1 [Oxytricha trifallax]
Length = 1216
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 82 KYTLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKD 140
K L + CLN +F ++++ RS+ILTSGTL+P+DSF EL T F ++LE H IDK
Sbjct: 851 KKLLGYICLNPSYIFKQLVKKNPRSIILTSGTLSPMDSFADELRTVFGVQLENQHAIDKS 910
Query: 141 QVFIGVL 147
Q+ + V+
Sbjct: 911 QLMVSVV 917
>gi|359482607|ref|XP_002279773.2| PREDICTED: regulator of telomere elongation helicase 1-like [Vitis
vinifera]
Length = 1084
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 14/91 (15%)
Query: 61 ADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSF 119
AD +G+++R TL +WC N G+ + S+ILTSGTL+P++SF
Sbjct: 411 ADALKGKASR-------------TLSWWCFNPGIAMQEFAVLGVSSIILTSGTLSPLESF 457
Query: 120 QSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
EL +FP++LE HVI +Q++ GV+ G
Sbjct: 458 AQELKLEFPVRLENPHVISSNQIWAGVVPAG 488
>gi|226494081|ref|NP_001152397.1| regulator of telomere elongation helicase 1 [Zea mays]
gi|195655863|gb|ACG47399.1| regulator of telomere elongation helicase 1 [Zea mays]
Length = 619
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 16/89 (17%)
Query: 56 SQGPHAD--EYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSD-IRESARSVILTSGT 112
SQ H D ++ G+S+R TL +WC N GL + ++ RS+ILTSGT
Sbjct: 414 SQQTHGDALKFLGKSSR-------------TLSWWCFNPGLAMEEFLKLGVRSIILTSGT 460
Query: 113 LAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
L+P+DS EL +FP++LE HVI DQ
Sbjct: 461 LSPLDSLAMELNLEFPVRLENPHVISSDQ 489
>gi|414881659|tpg|DAA58790.1| TPA: regulator of telomere elongation helicase 1 [Zea mays]
Length = 619
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 16/89 (17%)
Query: 56 SQGPHAD--EYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSD-IRESARSVILTSGT 112
SQ H D ++ G+S+R TL +WC N GL + ++ RS+ILTSGT
Sbjct: 414 SQQTHGDALKFLGKSSR-------------TLSWWCFNPGLAMEEFLKLGVRSIILTSGT 460
Query: 113 LAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
L+P+DS EL +FP++LE HVI DQ
Sbjct: 461 LSPLDSLAMELNLEFPVRLENPHVISSDQ 489
>gi|297743289|emb|CBI36156.3| unnamed protein product [Vitis vinifera]
Length = 777
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL +WC N G+ + S+ILTSGTL+P++SF EL +FP++LE HVI +Q+
Sbjct: 452 TLSWWCFNPGIAMQEFAVLGVSSIILTSGTLSPLESFAQELKLEFPVRLENPHVISSNQI 511
Query: 143 FIGVLGQG 150
+ GV+ G
Sbjct: 512 WAGVVPAG 519
>gi|345789824|ref|XP_543101.3| PREDICTED: regulator of telomere elongation helicase 1 [Canis lupus
familiaris]
Length = 1689
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 10/95 (10%)
Query: 57 QGPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSD-IRESARSVILTSGTLAP 115
+GP +D + + R K L +WC + G +++ R+VILTSGTLAP
Sbjct: 432 KGPRSDAWSSTAARKPGK---------VLSYWCFSPGHSMRQLVQQGVRTVILTSGTLAP 482
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
V SF E+ FP+ LE HVI + Q+++G++ +G
Sbjct: 483 VSSFALEMQIPFPVCLENPHVIHQQQIWVGIVSRG 517
>gi|395829361|ref|XP_003787828.1| PREDICTED: regulator of telomere elongation helicase 1 [Otolemur
garnettii]
Length = 1303
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 77 TPMSIKYTLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANH 135
P L +WC + G + +R+ S+ILTSGTLAPV SF E+ FPI LE H
Sbjct: 445 APRKPGKVLSYWCFSPGHSMRELVRQGVHSLILTSGTLAPVSSFALEMQIPFPICLENPH 504
Query: 136 VIDKDQVFIGVLGQG 150
+I++ Q+++GV+ +G
Sbjct: 505 IIEQHQIWVGVIPKG 519
>gi|255088938|ref|XP_002506391.1| predicted protein [Micromonas sp. RCC299]
gi|226521663|gb|ACO67649.1| predicted protein [Micromonas sp. RCC299]
Length = 644
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDIRESA-RSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL FWC + + S + E +SVILTSGTL+P+ SF SELG F ++LE HV+ QV
Sbjct: 431 TLSFWCFSPSVTMSHLAEKGVKSVILTSGTLSPMSSFASELGLNFRVRLENPHVVAPHQV 490
Query: 143 FIGVLGQG 150
+ GV+ G
Sbjct: 491 WGGVVPVG 498
>gi|308485824|ref|XP_003105110.1| CRE-DOG-1 protein [Caenorhabditis remanei]
gi|308257055|gb|EFP01008.1| CRE-DOG-1 protein [Caenorhabditis remanei]
Length = 1008
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
K T+ WC++ L F D RS+IL SGTL P+D+ ++ELG +F ++E + VI D
Sbjct: 681 KTTISLWCMSPALSFYDAFSETRSIILASGTLCPMDTLKTELGMEFKQQVEGDQVISPDN 740
Query: 142 VFIGVLGQG 150
+F V+ G
Sbjct: 741 IFAAVIPFG 749
>gi|384483940|gb|EIE76120.1| hypothetical protein RO3G_00824 [Rhizopus delemar RA 99-880]
Length = 762
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP 128
Y + FWCLN G++F D+ RSVILTSGTL+P+++F SEL T FP
Sbjct: 198 YKISFWCLNPGIIFQDMCAETRSVILTSGTLSPMETFASELETDFP 243
>gi|89887295|gb|ABD78307.1| regulator of telomere length splice variant isoform 2 [Bos taurus]
Length = 1237
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTLAP+ SF E+ FP+ LE HVI++ Q++
Sbjct: 451 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQIW 510
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 511 VGVIPKG 517
>gi|19074028|ref|NP_584634.1| ATP-DEPENDENT DNA-BINDING HELICASE (RAD3/XPD subfamily)
[Encephalitozoon cuniculi GB-M1]
gi|19068670|emb|CAD25138.1| ATP-DEPENDENT DNA-BINDING HELICASE (RAD3/XPD subfamily)
[Encephalitozoon cuniculi GB-M1]
gi|449329243|gb|AGE95516.1| ATP-dependent DNA-binding helicase [Encephalitozoon cuniculi]
Length = 678
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 80 SIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDK 139
S +++ +FW L+ G F RSV+L SGTL P SF SELG +F + A H+I +
Sbjct: 388 SCRFSYNFWLLDGGYTFRSFVGKVRSVVLLSGTLTPFSSFSSELGHEFAHTIVAPHLITQ 447
Query: 140 DQVFIGVLGQGQ--KVFIGVLG 159
QVF+ + +G K IG G
Sbjct: 448 KQVFVSCVRKGHLLKELIGTYG 469
>gi|148225626|ref|NP_001091044.1| regulator of telomere elongation helicase 1 [Bos taurus]
gi|84105070|gb|ABC54575.1| regulator of telomere length helicase 1 [Bos taurus]
gi|84105072|gb|ABC54576.1| regulator of telomere length helicase 1 [Bos taurus]
Length = 1266
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTLAP+ SF E+ FP+ LE HVI++ Q++
Sbjct: 451 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQIW 510
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 511 VGVIPKG 517
>gi|229891626|sp|A4K436.1|RTEL1_BOVIN RecName: Full=Regulator of telomere elongation helicase 1
gi|89887297|gb|ABD78308.1| regulator of telomere length splice variant isoform 3 [Bos taurus]
Length = 1216
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTLAP+ SF E+ FP+ LE HVI++ Q++
Sbjct: 451 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQIW 510
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 511 VGVIPKG 517
>gi|440889948|gb|ELR44730.1| Regulator of telomere elongation helicase 1 [Bos grunniens mutus]
Length = 1264
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTLAP+ SF E+ FP+ LE HVI++ Q++
Sbjct: 449 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQIW 508
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 509 VGVIPKG 515
>gi|396080955|gb|AFN82575.1| Rad3/XPD ATP-dependent DNA-binding helicase [Encephalitozoon
romaleae SJ-2008]
Length = 678
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 76 RTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANH 135
R + K++ +FW L++G F RSV+L SGTL P SF SELG +F + A H
Sbjct: 384 RNSRASKFSYNFWLLDAGYTFRSFVGKVRSVVLLSGTLTPFSSFSSELGHEFAHSIVAPH 443
Query: 136 VIDKDQVFIGVLGQGQ 151
+I + QVF+ + +G
Sbjct: 444 LITQKQVFVSCVRKGH 459
>gi|342180293|emb|CCC89770.1| putative helicase [Trypanosoma congolense IL3000]
Length = 965
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
TL +WC++ + +S S++LTSGTL+P+D F ELG F ++L+ +HVI++ QV
Sbjct: 422 TLSYWCMDISRSIKGVVDSTHSLLLTSGTLSPLDHFAMELGIHFEVRLKGDHVIEQKQVV 481
Query: 144 IGVLGQG 150
VL +G
Sbjct: 482 ASVLCKG 488
>gi|308802574|ref|XP_003078600.1| Helicase of the DEAD superfamily (ISS) [Ostreococcus tauri]
gi|116057053|emb|CAL51480.1| Helicase of the DEAD superfamily (ISS) [Ostreococcus tauri]
Length = 970
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 43/60 (71%)
Query: 89 CLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLG 148
C+ + F+ + + ARSVILTSGTL+P+ +F++ELG +F K+EA HV+ + V++ V G
Sbjct: 536 CMKPSVAFNSVAKKARSVILTSGTLSPMTTFEAELGVRFGAKIEAPHVVPNENVYVEVTG 595
>gi|89887293|gb|ABD78306.1| regulator of telomere length splice variant isoform 1 [Bos taurus]
Length = 1082
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTLAP+ SF E+ FP+ LE HVI++ Q++
Sbjct: 451 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQIW 510
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 511 VGVIPKG 517
>gi|334312296|ref|XP_001375942.2| PREDICTED: regulator of telomere elongation helicase 1 [Monodelphis
domestica]
Length = 1605
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + I++ R++ILTSGTLAP+ SF E+ F + LE HVID+ Q++
Sbjct: 453 LSYWCFSPGFSMHELIQQGVRTIILTSGTLAPISSFSMEMQIPFHVCLENPHVIDQHQIW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPKG 519
>gi|89887299|gb|ABD78309.1| regulator of telomere length splice variant isoform 4 [Bos taurus]
Length = 1121
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTLAP+ SF E+ FP+ LE HVI++ Q++
Sbjct: 451 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQIW 510
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 511 VGVIPKG 517
>gi|296481054|tpg|DAA23169.1| TPA: regulator of telomere elongation helicase 1 [Bos taurus]
Length = 583
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
L +WC + G + +R+ R++ILTSGTLAP+ SF E+ FP+ LE HVI++ Q+
Sbjct: 450 VLSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQI 509
Query: 143 FIGVLGQG 150
++GV+ +G
Sbjct: 510 WVGVIPKG 517
>gi|312379509|gb|EFR25759.1| hypothetical protein AND_08621 [Anopheles darlingi]
Length = 972
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+HFWC N G + RS++LTSGTLAP+ +EL P+ LE H+ID+ QV
Sbjct: 408 VHFWCFNPGFGMRQLASRGVRSIVLTSGTLAPLTPLINELNISIPVTLENPHIIDRSQVL 467
Query: 144 IGVLGQG 150
+ V+ +G
Sbjct: 468 VRVIAKG 474
>gi|76155584|gb|AAX26876.2| SJCHGC05649 protein [Schistosoma japonicum]
Length = 267
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 84 TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
T+ +WC + G + IR++ R +ILTSGTL P + ++EL +FPI L HVI+ DQ+
Sbjct: 35 TISYWCFSPGRAIQELIRQNVRCIILTSGTLYPFEPLEAELNLKFPITLRNPHVINADQL 94
Query: 143 FIGVLGQGQKVFIGVLGQGPQNIPLQALYKNTL 175
+ V+ +G GV G ++ Y+N+L
Sbjct: 95 NLSVIPRGPD---GVKLNGTYSVRETPAYRNSL 124
>gi|170034957|ref|XP_001845338.1| fanconi anemia group J protein [Culex quinquefasciatus]
gi|229891619|sp|B0W9F4.1|RTEL1_CULQU RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|167876796|gb|EDS40179.1| fanconi anemia group J protein [Culex quinquefasciatus]
Length = 978
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
++FWC N G + +ARS+ILTSGTLAP+ SEL +KLE H+ID QV
Sbjct: 463 VINFWCFNPGFGMRQLLGRNARSIILTSGTLAPLKPLISELDIPIAVKLENPHIIDGSQV 522
Query: 143 FIGVLGQG 150
+ ++GQG
Sbjct: 523 CVKIVGQG 530
>gi|426241833|ref|XP_004014789.1| PREDICTED: regulator of telomere elongation helicase 1 [Ovis aries]
Length = 1305
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTLAP+ SF E+ FP+ LE HVI + Q++
Sbjct: 489 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLENPHVISQHQIW 548
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 549 VGVIPKG 555
>gi|301780626|ref|XP_002925736.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1-like [Ailuropoda melanoleuca]
Length = 1303
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ ++ILTSGTLAP+ SF E+ FP+ LE HVID+ Q++
Sbjct: 452 LSYWCFSPGRSMRELVRQGVHTIILTSGTLAPLASFALEMQIPFPVCLENPHVIDRQQMW 511
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 512 VGIVPKG 518
>gi|299471115|emb|CBN78973.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 572
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 20/107 (18%)
Query: 87 FWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIG 145
FWC G+ D++ RS+I+TSGTL+P+ SF +EL F +++E HVI +Q +
Sbjct: 435 FWCFCPGVAMQDLKALGVRSIIVTSGTLSPLSSFGNELRLPFEVQVENPHVIGPEQTPLA 494
Query: 146 VLGQGQ-------------------KVFIGVLGQGPQNIPLQALYKN 173
L Q K +IG LG+GP ++ L + Y N
Sbjct: 495 GLLQAMSPRSSAWWPVGPSETKGKAKAWIGTLGRGPTSVTLNSSYAN 541
>gi|154419164|ref|XP_001582599.1| helicase [Trichomonas vaginalis G3]
gi|121916835|gb|EAY21613.1| helicase, putative [Trichomonas vaginalis G3]
Length = 1428
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ CL+ +VF +SA+S+IL SGTL+P SF+SELG FPIK HVI DQV
Sbjct: 374 SFEISCLDPSVVFEQAGKSAKSIILASGTLSPQQSFESELGLPFPIKASVPHVISPDQV 432
>gi|196008361|ref|XP_002114046.1| hypothetical protein TRIADDRAFT_27892 [Trichoplax adhaerens]
gi|190583065|gb|EDV23136.1| hypothetical protein TRIADDRAFT_27892 [Trichoplax adhaerens]
Length = 702
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + I + R+VILTSGTL+P++S +E FP++L+ HVIDK Q++
Sbjct: 395 LSYWCFSPSYSMKELIDQEVRAVILTSGTLSPIESLVAEFQVSFPVQLQNPHVIDKKQIW 454
Query: 144 IGVLGQG 150
IG + +G
Sbjct: 455 IGTVSKG 461
>gi|149033944|gb|EDL88727.1| similar to helicase-like protein NHL isoform 2 [Rattus norvegicus]
Length = 1264
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + +++ R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 440 LSYWCFSPSHSMRELVQQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 499
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 500 VGVIPRG 506
>gi|300797873|ref|NP_001178786.1| regulator of telomere elongation helicase 1 [Rattus norvegicus]
gi|229891752|sp|Q5RJZ1.2|RTEL1_RAT RecName: Full=Regulator of telomere elongation helicase 1
Length = 1274
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + +++ R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSHSMRELVQQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVIPRG 519
>gi|399218668|emb|CCF75555.1| unnamed protein product [Babesia microti strain RI]
Length = 838
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 84 TLHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELG---TQFPIKLEANHVIDK 139
+L F C+N+ F+ ++ E R++ILTSGTL+P+D+F S + +FPI LE H+I
Sbjct: 415 SLLFECMNASCTFTKLKNEKIRNLILTSGTLSPIDNFISNISGGYIKFPIVLENEHIISS 474
Query: 140 DQVFIGVLGQGQKVF 154
D+V++G + K+F
Sbjct: 475 DRVWVGCISSKLKIF 489
>gi|357631598|gb|EHJ79067.1| FancJ-like protein [Danaus plexippus]
Length = 830
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 10/115 (8%)
Query: 41 YRKDRTPMRGIEPVVSQGPHADEYQGESNRWYRKDR-----TPMSIKYTLHFWCLNSGLV 95
+R T M +P++ + + Y N +RK P S+ TL CLN ++
Sbjct: 487 FRNSGTCMDDYKPILVRK--IESYDASYNHNWRKSNFEQKVLPESLSLTL--CCLNPAVL 542
Query: 96 FSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
F+ + S+R V+L SGTL P+ S SELGT F + A + I KD+V++G L G
Sbjct: 543 FASVL-SSRCVVLASGTLTPMASLHSELGTHFTHAVSATYEISKDRVWVGSLKSG 596
>gi|302776424|ref|XP_002971377.1| hypothetical protein SELMODRAFT_94786 [Selaginella moellendorffii]
gi|300161359|gb|EFJ27975.1| hypothetical protein SELMODRAFT_94786 [Selaginella moellendorffii]
Length = 792
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
T +WC N G+ + + R+++LTSGTL+P++SF EL F ++LE HVI +Q+
Sbjct: 408 TFSWWCFNPGIAMEEFSKLGVRTIVLTSGTLSPLESFAIELKLPFDVRLENPHVIGANQI 467
Query: 143 FIGVLGQG 150
++GV+ G
Sbjct: 468 WVGVVSSG 475
>gi|302756033|ref|XP_002961440.1| hypothetical protein SELMODRAFT_77246 [Selaginella moellendorffii]
gi|300170099|gb|EFJ36700.1| hypothetical protein SELMODRAFT_77246 [Selaginella moellendorffii]
Length = 787
Score = 63.5 bits (153), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
T +WC N G+ + + R+++LTSGTL+P++SF EL F ++LE HVI +Q+
Sbjct: 409 TFSWWCFNPGIAMEEFSKLGVRTIVLTSGTLSPLESFAIELKLPFDVRLENPHVIGANQI 468
Query: 143 FIGVLGQG 150
++GV+ G
Sbjct: 469 WVGVVSSG 476
>gi|350414537|ref|XP_003490348.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Bombus impatiens]
Length = 980
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIRESA-RSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+ +WC + G + + RS+ILTSGTL+P+ F SELG ++LE H++ DQ+
Sbjct: 453 ISYWCFSPGFSMQQLMDQGVRSIILTSGTLSPLKPFISELGIPIELQLENPHIVKGDQIC 512
Query: 144 IGVLGQG 150
+GVL QG
Sbjct: 513 VGVLSQG 519
>gi|347964194|ref|XP_311162.5| AGAP000634-PA [Anopheles gambiae str. PEST]
gi|387912925|sp|Q7QEI1.5|RTEL1_ANOGA RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|333467418|gb|EAA06834.5| AGAP000634-PA [Anopheles gambiae str. PEST]
Length = 991
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 80 SIKYTLHFWCLNSGLVFSDIRESA-RSVILTSGTLAPVDSFQSELGTQFPIKLEANHVID 138
S ++FWC N G + +S RS+ILTSGTLAP+ F SEL + LE H+I
Sbjct: 450 STSKVINFWCFNPGFGMRQLVDSGTRSIILTSGTLAPLKPFISELSLPVAVSLENPHIIA 509
Query: 139 KDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
+ Q V++ V+ GP + L + +KN
Sbjct: 510 RSQ-----------VYVKVITHGPDRVELNSSFKN 533
>gi|340715420|ref|XP_003396211.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 homolog [Bombus terrestris]
Length = 996
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIRESA-RSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+ +WC + G + + RS+ILTSGTL+P+ F SELG ++LE H++ DQ+
Sbjct: 453 ISYWCFSPGFSMQQLMDQGVRSIILTSGTLSPLKPFISELGIPIELQLENPHIVKGDQIC 512
Query: 144 IGVLGQG 150
+GVL QG
Sbjct: 513 VGVLSQG 519
>gi|154341304|ref|XP_001566605.1| putative helicase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063928|emb|CAM40119.1| putative helicase [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 954
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
TL FW L++ + + S +LTSGTL+P+D F +ELG +F ++L+ +HVI DQV
Sbjct: 416 TLGFWELDNTRLMRQVVLPLHSTLLTSGTLSPLDQFAAELGVEFQVRLKGSHVIQPDQVL 475
Query: 144 IGVLGQG 150
GVL +G
Sbjct: 476 GGVLCRG 482
>gi|348554129|ref|XP_003462878.1| PREDICTED: regulator of telomere elongation helicase 1-like [Cavia
porcellus]
Length = 1250
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + + + R++ILTSGTLAP+ SF E+ FP+ LE HVI+K Q++
Sbjct: 447 LSYWCFSPGHSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHVIEKHQLW 506
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 507 VGVVPRG 513
>gi|157120352|ref|XP_001653621.1| regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti]
gi|122117342|sp|Q16X92.1|RTEL1_AEDAE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|108875002|gb|EAT39227.1| AAEL008960-PA [Aedes aegypti]
Length = 1010
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+ FWC N G + +ARS+ILTSGTLAP+ SEL ++LE H+ID QV
Sbjct: 462 VSFWCFNPGFGMRQLLGRNARSIILTSGTLAPLKPLISELDIPIAVRLENPHIIDGSQVC 521
Query: 144 IGVLGQG 150
+ ++GQG
Sbjct: 522 VKIVGQG 528
>gi|145354926|ref|XP_001421725.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581963|gb|ABP00019.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 749
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL +WC GL I + + +L SGTL+P++SF SEL FP++LE HVI ++QV
Sbjct: 454 TLSYWCFFPGLCLKALIDKGVGTFLLASGTLSPMESFASELALDFPVRLENPHVIKRNQV 513
Query: 143 FIGVLGQG 150
+ GV+ G
Sbjct: 514 WGGVVTHG 521
>gi|123505191|ref|XP_001328927.1| helicase [Trichomonas vaginalis G3]
gi|121911876|gb|EAY16704.1| helicase, putative [Trichomonas vaginalis G3]
Length = 884
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
H C+N G VF A +VIL+SGTL P++ F++E G FPI+L A HVI DQV
Sbjct: 451 FHGLCMNPGAVFHRPGTEASNVILSSGTLTPLEEFENEFGVPFPIRLSAPHVISPDQV 508
>gi|383862044|ref|XP_003706494.1| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Megachile rotundata]
Length = 974
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 65 QGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESA-RSVILTSGTLAPVDSFQSEL 123
+G+ + W K + + + +WC + G + E S++LTSGTL+P+ F S+L
Sbjct: 431 KGKKDVWESKKKVLKNEGKIISYWCFSPGYSMHQLMEQGVHSIVLTSGTLSPLQPFISDL 490
Query: 124 GTQFPIKLEANHVIDKDQVFIGVLGQG 150
G ++LE H++ DQ+ +GVL QG
Sbjct: 491 GIPIEVQLENPHIVKGDQICVGVLSQG 517
>gi|148675458|gb|EDL07405.1| regulator of telomere elongation helicase 1 [Mus musculus]
Length = 1273
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 440 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 499
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 500 VGIVPRG 506
>gi|328776825|ref|XP_394659.4| PREDICTED: Fanconi anemia group J protein homolog isoform 1 [Apis
mellifera]
Length = 305
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 11/83 (13%)
Query: 90 LNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQ 149
+N G+ FS + +AR +IL SGTL P SFQSELGT F L HVI K+Q
Sbjct: 1 MNPGVAFSPLALNARCIILASGTLTPTTSFQSELGTSFTHVLNTGHVIPKEQ-------- 52
Query: 150 GQKVFIGVLGQGPQNIPLQALYK 172
V+ + +GP I L+A Y+
Sbjct: 53 ---VYATCIPKGPNGILLKANYQ 72
>gi|38707238|gb|AAR27237.1| DEAH helicase isoform 5 [Mus musculus]
Length = 1170
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|262263445|ref|NP_001160138.1| regulator of telomere elongation helicase 1 isoform 3 [Mus
musculus]
Length = 1170
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|38707236|gb|AAR27236.1| DEAH helicase isoform 3 [Mus musculus]
Length = 1164
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|38707234|gb|AAR27235.1| DEAH helicase isoform 2 [Mus musculus]
Length = 1203
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|111493941|gb|AAI05579.1| Rtel1 protein [Mus musculus]
Length = 1203
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|38707240|gb|AAR27238.1| DEAH helicase isoform 6 [Mus musculus]
Length = 1128
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|262263443|ref|NP_001160137.1| regulator of telomere elongation helicase 1 isoform 2 [Mus
musculus]
gi|229891754|sp|Q0VGM9.2|RTEL1_MOUSE RecName: Full=Regulator of telomere elongation helicase 1
gi|148878220|gb|AAI45659.1| Rtel1 protein [Mus musculus]
gi|219519260|gb|AAI44979.1| Rtel1 protein [Mus musculus]
Length = 1203
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|262263447|ref|NP_001160139.1| regulator of telomere elongation helicase 1 isoform 4 [Mus
musculus]
gi|219521615|gb|AAI44978.1| Rtel1 protein [Mus musculus]
Length = 1164
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|38707232|gb|AAR27234.1| DEAH helicase isoform 1 [Mus musculus]
Length = 1209
Score = 62.4 bits (150), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|262263441|ref|NP_001001882.3| regulator of telomere elongation helicase 1 isoform 1 [Mus
musculus]
Length = 1209
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|50510779|dbj|BAD32375.1| mKIAA1088 protein [Mus musculus]
Length = 1211
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 455 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 514
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 515 VGIVPRG 521
>gi|262263449|ref|NP_001160140.1| regulator of telomere elongation helicase 1 isoform 5 [Mus
musculus]
Length = 1128
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|169806602|ref|XP_001828045.1| DNA repair helicase [Enterocytozoon bieneusi H348]
gi|161779173|gb|EDQ31197.1| DNA repair helicase [Enterocytozoon bieneusi H348]
Length = 670
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+ FW L+ ++F+ +R RS+IL SGTL P +F SEL F KL A H++ +QV
Sbjct: 384 FAYCFWLLDPSIIFAGLRNEVRSIILLSGTLTPFATFTSELKVNFENKLIAPHILVSNQV 443
Query: 143 FIGVLGQGQ 151
F+ + +G
Sbjct: 444 FVANIKKGH 452
>gi|354481991|ref|XP_003503184.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1-like [Cricetulus griseus]
Length = 1259
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+ID++Q++
Sbjct: 450 LSYWCFSPSHSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDRNQLW 509
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 510 VGVIPRG 516
>gi|219110231|ref|XP_002176867.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411402|gb|EEC51330.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 791
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
T+ +WC L ++ + RS+I+TSGTL+P+ S+ ELG FP LE H++ +Q+
Sbjct: 451 TVSYWCFAPALAMEELASLNVRSIIVTSGTLSPLPSYSMELGLNFPHTLENPHIVSDNQI 510
Query: 143 FIGVLGQG 150
+ V+G+G
Sbjct: 511 HVRVIGKG 518
>gi|344254979|gb|EGW11083.1| Regulator of telomere elongation helicase 1 [Cricetulus griseus]
Length = 1225
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+ID++Q++
Sbjct: 450 LSYWCFSPSHSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDRNQLW 509
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 510 VGVIPRG 516
>gi|402467806|gb|EJW03051.1| DNA repair helicase (rad3) [Edhazardia aedis USNM 41457]
Length = 704
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 80 SIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDK 139
S ++++FW L+ ++F +A+SVIL SGTL P +S +SELG F +EA HVI
Sbjct: 417 SSSFSINFWLLDPAVIFKPFACAAKSVILLSGTLKPFESLRSELGFSFKNAVEAPHVIKD 476
Query: 140 DQVFIGVLGQGQ--KVFIGVLG 159
+ + ++ +G K IG G
Sbjct: 477 TNICVSIIKKGHLGKELIGKYG 498
>gi|339240165|ref|XP_003376008.1| fanconi anemia group J protein-like protein [Trichinella spiralis]
gi|316975301|gb|EFV58747.1| fanconi anemia group J protein-like protein [Trichinella spiralis]
Length = 822
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 11/78 (14%)
Query: 95 VFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVF 154
F D+ +SVIL SGTL+P+ S+ +ELG F LEA HV+ ++++
Sbjct: 498 AFDDVSSKTKSVILASGTLSPLKSYATELGLPFQFSLEAPHVVPP-----------ERMW 546
Query: 155 IGVLGQGPQNIPLQALYK 172
IG +G GP +IPL+A ++
Sbjct: 547 IGSIGVGPNDIPLKATFQ 564
>gi|452822263|gb|EME29284.1| putative DNA helicase required for mitotic chromosome segregation
CHL1 [Galdieria sulphuraria]
Length = 984
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVID-KDQ 141
+ L WC N + FS ++ +R ++L+SGTL P+DSF SELG F I HVID K+Q
Sbjct: 486 FKLCLWCFNPAVSFSYLQSHSRCIVLSSGTLTPMDSFSSELGIHFDIMNSLPHVIDVKNQ 545
Query: 142 V 142
V
Sbjct: 546 V 546
>gi|256075476|ref|XP_002574045.1| regulator of telomere elongation helicase 1 rtel1 [Schistosoma
mansoni]
Length = 1120
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
T+ +WC + G I+++ R +ILTSGTL PV+ ++EL +FPI L HVI+ DQ+
Sbjct: 438 TISYWCFSPGRAIQQLIQQNVRCIILTSGTLYPVEPIEAELNLKFPITLRNPHVINPDQL 497
Query: 143 FIGVLGQG 150
+ ++ +G
Sbjct: 498 NLSIIPRG 505
>gi|353232615|emb|CCD79969.1| putative regulator of telomere elongation helicase 1 rtel1
[Schistosoma mansoni]
Length = 1165
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
T+ +WC + G I+++ R +ILTSGTL PV+ ++EL +FPI L HVI+ DQ+
Sbjct: 483 TISYWCFSPGRAIQQLIQQNVRCIILTSGTLYPVEPIEAELNLKFPITLRNPHVINPDQL 542
Query: 143 FIGVLGQG 150
+ ++ +G
Sbjct: 543 NLSIIPRG 550
>gi|357622566|gb|EHJ73993.1| fanconi anemia group J protein [Danaus plexippus]
Length = 950
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 80 SIKYTLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVID 138
S + L +WC + G + E + RS+ILTSGTLAP+ SELG ++LE H++
Sbjct: 438 SAERVLSYWCFSPGFGMKQLLEQNVRSIILTSGTLAPLKPLISELGIPIGVQLENPHIVK 497
Query: 139 KDQVFIGVLGQG 150
+Q+ + ++GQG
Sbjct: 498 SNQIHVKIIGQG 509
>gi|428183991|gb|EKX52847.1| hypothetical protein GUITHDRAFT_39398, partial [Guillardia theta
CCMP2712]
Length = 719
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 84 TLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
+L +WC ++G+ DI ++ R+++L SGTL+P+ S+ E+ +F + LE HVI +Q+
Sbjct: 417 SLGYWCFSAGVTMRDILQQGVRNIVLASGTLSPMSSWSIEMEMKFEVVLENEHVISDEQI 476
Query: 143 FIGVLGQGQK 152
F VL +G +
Sbjct: 477 FAAVLRRGPR 486
>gi|71413416|ref|XP_808847.1| helicase [Trypanosoma cruzi strain CL Brener]
gi|70873137|gb|EAN86996.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+L +WCL++ I S++LTSGTL+P++ F +ELG +F + L+ HVI ++QV
Sbjct: 420 SLGYWCLDTSCAVKTIVAGLNSLLLTSGTLSPLEHFAAELGIEFGVSLKGAHVIQQNQVL 479
Query: 144 IGVLGQG 150
VL +G
Sbjct: 480 GCVLCKG 486
>gi|303388455|ref|XP_003072462.1| Rad3/XPD ATP-dependent DNA-binding helicase [Encephalitozoon
intestinalis ATCC 50506]
gi|303301602|gb|ADM11102.1| Rad3/XPD ATP-dependent DNA-binding helicase [Encephalitozoon
intestinalis ATCC 50506]
Length = 678
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
K++ +FW L++G F RS++L SGTL P SF SELG F + A H++ + Q
Sbjct: 390 KFSYNFWLLDAGYTFRSFVGKVRSIVLLSGTLTPFSSFSSELGHDFTHSIVAPHLVTEKQ 449
Query: 142 VFIGVLGQGQ 151
VF + +G
Sbjct: 450 VFASCVRKGH 459
>gi|407410515|gb|EKF32919.1| helicase, putative [Trypanosoma cruzi marinkellei]
Length = 951
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+L +WCL++ + S++LTSGTL+P++ F +ELG +F + L+ HVI ++QV
Sbjct: 420 SLGYWCLDTSCAVKKLVAGLNSLLLTSGTLSPLEHFAAELGVEFGVSLKGAHVIQQNQVL 479
Query: 144 IGVLGQG 150
VL +G
Sbjct: 480 GCVLCKG 486
>gi|118387755|ref|XP_001026980.1| DNA repair helicase (rad3) [Tetrahymena thermophila]
gi|89308750|gb|EAS06738.1| DNA repair helicase (rad3) [Tetrahymena thermophila SB210]
Length = 1433
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 14/102 (13%)
Query: 80 SIKY---TLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANH 135
S KY +++ WCL+ + F +I E S++LTSGTL P++S++SEL +F +KL +H
Sbjct: 520 STKYEQSSINLWCLDPSVAFQNILNEGPYSIMLTSGTLHPMNSWESELNIKFDVKLATSH 579
Query: 136 VIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNTLVG 177
+I+ + +G GV+ GP + + + N G
Sbjct: 580 IINIQKSVVG----------GVVKNGPNKMEMNFSFNNRQNG 611
>gi|38707226|gb|AAR27231.1| DEAH helicase isoform 5 [Mus spretus]
Length = 1170
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|38707222|gb|AAR27229.1| DEAH helicase isoform 3 [Mus spretus]
Length = 1164
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|38707228|gb|AAR27232.1| DEAH helicase isoform 6 [Mus spretus]
Length = 1128
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|46452191|gb|AAS98192.1| DEAH helicase isoform 1 [Mus spretus]
Length = 1209
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|81872267|sp|Q6H1L8.1|RTEL1_MUSSP RecName: Full=Regulator of telomere elongation helicase 1
gi|38707220|gb|AAR27228.1| DEAH helicase isoform 2 [Mus spretus]
Length = 1203
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|391338586|ref|XP_003743639.1| PREDICTED: LOW QUALITY PROTEIN: regulator of telomere elongation
helicase 1 homolog [Metaseiulus occidentalis]
Length = 1132
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 12/93 (12%)
Query: 82 KYTLHFWCLNSGLVFSDIRESA-RSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKD 140
K+ LHF CL G+ I ++ SVILTSGTL+P+ + +ELG F I+L +H+I D
Sbjct: 442 KWELHFVCLAPGVRMKSIVQAGVHSVILTSGTLSPMGTLATELGIPFQIQLSNDHIITPD 501
Query: 141 QVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
K+ + + +GP N+ L + Y+N
Sbjct: 502 -----------KIQVLCVPKGPDNVELISTYQN 523
>gi|407849947|gb|EKG04513.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+L +WCL++ + S++LTSGTL+P++ F +ELG +F + L+ HVI ++QV
Sbjct: 420 SLGYWCLDTSCAVKTLVAGLNSLLLTSGTLSPLEHFAAELGIEFGVSLKGAHVIQQNQVL 479
Query: 144 IGVLGQG 150
VL +G
Sbjct: 480 GCVLCKG 486
>gi|71660707|ref|XP_822069.1| helicase [Trypanosoma cruzi strain CL Brener]
gi|70887462|gb|EAO00218.1| helicase, putative [Trypanosoma cruzi]
Length = 951
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+L +WCL++ + S++LTSGTL+P++ F +ELG +F + L+ HVI ++QV
Sbjct: 420 SLGYWCLDTSCAVKTLVAGLNSLLLTSGTLSPLEHFAAELGIEFGVSLKGAHVIQQNQVL 479
Query: 144 IGVLGQG 150
VL +G
Sbjct: 480 GCVLCKG 486
>gi|38707224|gb|AAR27230.1| DEAH helicase isoform 4 [Mus spretus]
Length = 1165
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
>gi|195396523|ref|XP_002056881.1| GJ16649 [Drosophila virilis]
gi|229891629|sp|B4M891.1|RTEL1_DROVI RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194146648|gb|EDW62367.1| GJ16649 [Drosophila virilis]
Length = 1005
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 454 INFWCFNPGFGMEQLLNAHVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDRSQVY 513
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 514 VKIIGTG 520
>gi|170585544|ref|XP_001897542.1| DEAD_2 family protein [Brugia malayi]
gi|158594849|gb|EDP33426.1| DEAD_2 family protein [Brugia malayi]
Length = 794
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 70 RWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFP 128
++++ T S TL++WC + + + RSVI+TSGTL+P+DSF + LG FP
Sbjct: 361 KYFQLYITKHSSVITLNYWCFSPSVAMWYLHSCGVRSVIVTSGTLSPLDSFINNLGISFP 420
Query: 129 IKLEANHVIDKDQVFIGVLGQGQ 151
I LE H + DQ+ + Q
Sbjct: 421 IALENQHAANVDQILCARIRSSQ 443
>gi|195470104|ref|XP_002099973.1| GE16425 [Drosophila yakuba]
gi|229891631|sp|B4PZB4.1|RTEL1_DROYA RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194187497|gb|EDX01081.1| GE16425 [Drosophila yakuba]
Length = 985
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 79 MSIKYTLHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVI 137
+ + ++FWC N G + + RSVILTSGTLAP+ +EL LE H++
Sbjct: 448 IKVAKIINFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIV 507
Query: 138 DKDQVFIGVLGQG 150
D+ QV++ ++G G
Sbjct: 508 DQSQVYVKIIGTG 520
>gi|194764312|ref|XP_001964274.1| GF20802 [Drosophila ananassae]
gi|229891621|sp|B3MSG8.1|RTEL1_DROAN RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|190619199|gb|EDV34723.1| GF20802 [Drosophila ananassae]
Length = 994
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVY 513
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 514 VKIIGTG 520
>gi|195448955|ref|XP_002071885.1| GK24923 [Drosophila willistoni]
gi|229891630|sp|B4NDG5.1|RTEL1_DROWI RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194167970|gb|EDW82871.1| GK24923 [Drosophila willistoni]
Length = 998
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 460 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVY 519
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 520 VKIIGTG 526
>gi|195131929|ref|XP_002010396.1| GI15901 [Drosophila mojavensis]
gi|229891624|sp|B4L1Z2.1|RTEL1_DROMO RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|193908846|gb|EDW07713.1| GI15901 [Drosophila mojavensis]
Length = 1014
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 455 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVY 514
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 515 VKIIGTG 521
>gi|24639946|ref|NP_572254.1| CG4078, isoform A [Drosophila melanogaster]
gi|442615242|ref|NP_001259262.1| CG4078, isoform B [Drosophila melanogaster]
gi|75027961|sp|Q9W484.1|RTEL1_DROME RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|7290625|gb|AAF46074.1| CG4078, isoform A [Drosophila melanogaster]
gi|60677863|gb|AAX33438.1| RE31401p [Drosophila melanogaster]
gi|220952186|gb|ACL88636.1| CG4078-PA [synthetic construct]
gi|440216460|gb|AGB95108.1| CG4078, isoform B [Drosophila melanogaster]
Length = 985
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVY 513
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 514 VKIIGTG 520
>gi|195340550|ref|XP_002036876.1| GM12432 [Drosophila sechellia]
gi|229891628|sp|B4I0K4.1|RTEL1_DROSE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194130992|gb|EDW53035.1| GM12432 [Drosophila sechellia]
Length = 966
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 435 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVY 494
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 495 VKIIGTG 501
>gi|194888991|ref|XP_001977003.1| GG18780 [Drosophila erecta]
gi|229891622|sp|B3NSW1.1|RTEL1_DROER RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|190648652|gb|EDV45930.1| GG18780 [Drosophila erecta]
Length = 985
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVY 513
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 514 VKIIGTG 520
>gi|66807703|ref|XP_637574.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
gi|60465999|gb|EAL64066.1| DEAD/DEAH box helicase [Dictyostelium discoideum AX4]
Length = 1078
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ- 141
Y W ++ + FS + ++ RSV+LTSGTL+P+ SF EL +FPI E ++ D Q
Sbjct: 781 YQFGIWAMSPRIAFSSLVQATRSVVLTSGTLSPLYSFPMELAAKFPISAEMGNLPDIAQR 840
Query: 142 VFIGVLGQGQKVFIGVLGQGP 162
+IG L G K + GP
Sbjct: 841 AWIGTLSHGVKGTKLICTHGP 861
>gi|195162511|ref|XP_002022098.1| GL14463 [Drosophila persimilis]
gi|229891625|sp|B4GU19.1|RTEL1_DROPE RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|194103996|gb|EDW26039.1| GL14463 [Drosophila persimilis]
Length = 1009
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 455 VNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVY 514
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 515 VKIIGTG 521
>gi|198467617|ref|XP_001354453.2| GA17940 [Drosophila pseudoobscura pseudoobscura]
gi|229891755|sp|Q29FS3.2|RTEL1_DROPS RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|198149329|gb|EAL31506.2| GA17940 [Drosophila pseudoobscura pseudoobscura]
Length = 1009
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 455 VNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVY 514
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 515 VKIIGTG 521
>gi|300707205|ref|XP_002995821.1| hypothetical protein NCER_101193 [Nosema ceranae BRL01]
gi|239605041|gb|EEQ82150.1| hypothetical protein NCER_101193 [Nosema ceranae BRL01]
Length = 695
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
++ +FW ++ VFS + +++IL SGTL P SF SELG +F ++ A H+I+ QV
Sbjct: 405 FSYNFWLMDGAYVFSPFVKQVKALILLSGTLTPFVSFSSELGHKFAHQISAPHLINDKQV 464
Query: 143 FIGVLGQGQ 151
+ L +G
Sbjct: 465 LVTCLKRGH 473
>gi|123486053|ref|XP_001324631.1| helicase [Trichomonas vaginalis G3]
gi|121907517|gb|EAY12408.1| helicase, putative [Trichomonas vaginalis G3]
Length = 880
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 72 YRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKL 131
Y K++ ++ K L C++ G+ F I SVI+TSGTL+P+ ++SEL T+F +L
Sbjct: 398 YEKNKEEINPK--LELLCMSPGVAFRSIVAKTHSVIITSGTLSPLTQYESELRTKFTHQL 455
Query: 132 EANHVIDKDQVFIGVL 147
A HVID QV ++
Sbjct: 456 SAKHVIDPSQVLSMII 471
>gi|312088350|ref|XP_003145827.1| hypothetical protein LOAG_10252 [Loa loa]
Length = 554
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 84 TLHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL++WC + + ++ RSVI+TSGTL+P+DSF + LG FPI LE H + DQ+
Sbjct: 11 TLNYWCFSPSVAMWYLQSCGVRSVIVTSGTLSPLDSFVNSLGISFPITLENEHAANLDQI 70
Query: 143 F 143
Sbjct: 71 L 71
>gi|384253151|gb|EIE26626.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 812
Score = 58.9 bits (141), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 84 TLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
TL +WC G+ + + R ++LTSGTLAP+DSF EL FP+ LE HV++ Q
Sbjct: 407 TLSYWCFEPGVAMAALCALKVRCILLTSGTLAPLDSFAQELSLDFPVTLENPHVVNTSQ 465
>gi|72386955|ref|XP_843902.1| helicase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62359030|gb|AAX79479.1| helicase, putative [Trypanosoma brucei]
gi|70800434|gb|AAZ10343.1| helicase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 963
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
TL +WCL+ V + S++LTSGTL+P+ F ELG F + L+ +HVI++ QV
Sbjct: 422 TLSYWCLDISRVVQSLVCDLHSLLLTSGTLSPLSHFAMELGVSFEVCLKGSHVIEEKQVI 481
Query: 144 IGVLGQG 150
VL +G
Sbjct: 482 GSVLCRG 488
>gi|402588914|gb|EJW82847.1| hypothetical protein WUBG_06243, partial [Wuchereria bancrofti]
Length = 550
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 84 TLHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL++WC + + + RSVI+TSGTL+P+DSF + LG FP+ LE H + DQ+
Sbjct: 11 TLNYWCFSPSVAMWYLHSGGVRSVIVTSGTLSPLDSFINNLGISFPVTLENQHAANVDQI 70
Query: 143 FIGVLGQGQ 151
+ Q
Sbjct: 71 LCARIRSSQ 79
>gi|261327010|emb|CBH09985.1| helicase, putative [Trypanosoma brucei gambiense DAL972]
Length = 963
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
TL +WCL+ V + S++LTSGTL+P+ F ELG F + L+ +HVI++ QV
Sbjct: 422 TLSYWCLDISRVVQSLVCDLHSLLLTSGTLSPLSHFAMELGVSFEVCLKGSHVIEEKQVI 481
Query: 144 IGVLGQG 150
VL +G
Sbjct: 482 GSVLCRG 488
>gi|145525869|ref|XP_001448751.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416306|emb|CAK81354.1| unnamed protein product [Paramecium tetraurelia]
Length = 913
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 84 TLHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVID 138
+L+ WCL+ L F ++ + S+I TSGTLAP++S+QSEL +F I+L HVID
Sbjct: 449 SLNMWCLDPSLAFKKLKLNNICSIIFTSGTLAPMESWQSELQMEFKIQLSNKHVID 504
>gi|328719600|ref|XP_001948918.2| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Acyrthosiphon pisum]
Length = 946
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 12/89 (13%)
Query: 84 TLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL+FWC + G D+ + + R +ILTSGTL+P+ + SE+G ++L+ HVI Q
Sbjct: 441 TLNFWCFSPGFGMRDLLDRNVRCIILTSGTLSPLAATISEIGIPVKVQLQNAHVIKNSQ- 499
Query: 143 FIGVLGQGQKVFIGVLGQGPQNIPLQALY 171
V + V+ GP N PL Y
Sbjct: 500 ----------VCVSVIKSGPSNKPLICNY 518
>gi|123491434|ref|XP_001325843.1| helicase [Trichomonas vaginalis G3]
gi|121908748|gb|EAY13620.1| helicase, putative [Trichomonas vaginalis G3]
Length = 747
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 79 MSIKYTLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVI 137
+S + + +C FS+I R++ILTSGTLAP+++F S G +FPI LE H+
Sbjct: 360 LSTDHCFNIYCFTPEKAFSEIVNLQPRTIILTSGTLAPLETFASYFGYKFPIILENPHIA 419
Query: 138 DKDQVFIGVLGQG 150
+Q+ + G+G
Sbjct: 420 KPEQLLVICCGEG 432
>gi|380006443|gb|AFD29612.1| RTEL1 [Schmidtea mediterranea]
Length = 1057
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
L FWC+ +G + RS+ILTSGTL P+++ + ++ +F ++L +HVI+ DQ+
Sbjct: 457 VLSFWCMTAGRTMKSLAGCEVRSIILTSGTLYPIETLKLDMDIKFEVELRNSHVINADQM 516
Query: 143 FIGVLGQG 150
+ V +G
Sbjct: 517 MVSVCTKG 524
>gi|340052773|emb|CCC47058.1| putative helicase [Trypanosoma vivax Y486]
Length = 968
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WCL+ + +S S+ILTSGTL+P+D F +E+G F + L HVI QV
Sbjct: 432 VLGYWCLDISPSLQTLVKSVHSLILTSGTLSPLDHFAAEIGIHFEVCLSGGHVIAPSQVA 491
Query: 144 IGVLGQG 150
+L +G
Sbjct: 492 GCILCKG 498
>gi|323454890|gb|EGB10759.1| hypothetical protein AURANDRAFT_62227 [Aureococcus anophagefferens]
Length = 1120
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 85 LHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + GL S++ ARS++ SGTL+P+ SF +ELG + P LE HVID
Sbjct: 535 LCYWCFSPGLAVSELLALGARSLLFASGTLSPLPSFAAELGLRKPSVLENPHVIDA---- 590
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALY 171
+++ V+G P PL++ +
Sbjct: 591 ------ATQLYAAVVGVAPSARPLKSTW 612
>gi|195049134|ref|XP_001992658.1| GH24089 [Drosophila grimshawi]
gi|229891623|sp|B4JNS2.1|RTEL1_DROGR RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|193893499|gb|EDV92365.1| GH24089 [Drosophila grimshawi]
Length = 986
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++++ QV+
Sbjct: 455 INFWCFNPGFGMEQLLNTHVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVNEAQVY 514
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 515 VKIIGTG 521
>gi|300176870|emb|CBK25439.2| unnamed protein product [Blastocystis hominis]
Length = 1177
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 78 PMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVI 137
P L CLN+ +VF DI+ + S++LTSGTLAP+ SF +EL F ++E I
Sbjct: 528 PEPANVELSILCLNAAIVFEDIKSTCSSIVLTSGTLAPLSSFANELNIPFQNQMEGIASI 587
Query: 138 D-KDQVFIGVL 147
D Q+F V+
Sbjct: 588 DVHRQLFAAVV 598
>gi|429962084|gb|ELA41628.1| hypothetical protein VICG_01376 [Vittaforma corneae ATCC 50505]
Length = 657
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 40/69 (57%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
Y+ + W L+ ++F + +S+ L SGTL P SF SEL QF KL A H+I +QV
Sbjct: 366 YSYNLWLLDPSVMFLPLVSKIKSISLLSGTLTPFSSFCSELKFQFQHKLVAPHIIRTEQV 425
Query: 143 FIGVLGQGQ 151
F+ + +G
Sbjct: 426 FVASIRKGH 434
>gi|345490538|ref|XP_001606129.2| PREDICTED: regulator of telomere elongation helicase 1 homolog
[Nasonia vitripennis]
Length = 1111
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+ +WC + G + + RSVILTSGTL+P+ F SE+G + +LE H++ Q+
Sbjct: 455 ISYWCFSPGFGMQQLLDQGVRSVILTSGTLSPLKPFISEIGIEIGAQLENPHIVSNKQIC 514
Query: 144 IGVLGQG 150
+G++ G
Sbjct: 515 VGIISNG 521
>gi|145525952|ref|XP_001448787.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416353|emb|CAK81390.1| unnamed protein product [Paramecium tetraurelia]
Length = 901
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 65 QGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSEL 123
Q E N++ S + ++H WCL L FS + +S S++LTSGTL+P+ S+ EL
Sbjct: 455 QNEFNQYKLSFVLDQSNQLSIHMWCLEPSLAFSRLYNKSIHSILLTSGTLSPMPSWSCEL 514
Query: 124 GTQFPIKLEANHVIDKDQ 141
F ++L H+ID D+
Sbjct: 515 RIPFDVQLANEHIIDLDK 532
>gi|340503511|gb|EGR30093.1| regulator of telomere elongation helicase 1, putative
[Ichthyophthirius multifiliis]
Length = 671
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 85 LHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++ CL+ + FS I+ ++ S++LTSGTLAP DS++ EL FPI L HVID +
Sbjct: 460 IYMQCLDPSVSFSFIKIKNPHSILLTSGTLAPFDSWELELKIPFPIILNNQHVIDNKKNL 519
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALY----KNTLVGDV 179
+ G+ +GP L+ Y KN ++ DV
Sbjct: 520 LA----------GICIKGPLEQELEFTYQNRQKNLILDDV 549
>gi|330843781|ref|XP_003293824.1| hypothetical protein DICPUDRAFT_5561 [Dictyostelium purpureum]
gi|325075810|gb|EGC29655.1| hypothetical protein DICPUDRAFT_5561 [Dictyostelium purpureum]
Length = 617
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 88 WCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVID-KDQVFIGV 146
W L+ + FS + S+ILTSGTL+P+ SF EL + FPI E ++ D K++ +IG
Sbjct: 415 WALSPRIAFSSLNSKTHSIILTSGTLSPLYSFPFELASPFPISAEMGNLSDIKNRAWIGT 474
Query: 147 LGQG 150
L G
Sbjct: 475 LSHG 478
>gi|123437769|ref|XP_001309677.1| helicase [Trichomonas vaginalis G3]
gi|121891414|gb|EAX96747.1| helicase, putative [Trichomonas vaginalis G3]
Length = 859
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
T+ C + + + + +++ILTSGTL+P+ S + EL +FPIKLE NH++ D
Sbjct: 362 TISIICFSPSIAMKKVADFLPKTMILTSGTLSPLSSLEDELEYKFPIKLECNHIVSPDNF 421
Query: 143 FIGVLGQG 150
+ + G
Sbjct: 422 LVAIANSG 429
>gi|221488689|gb|EEE26903.1| DEAD_2 domain-containing protein [Toxoplasma gondii GT1]
Length = 2275
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQF-----PIKLEANHVID 138
+LH W L + F I + AR+VI+ SGTL P++S SELG F P + A+HV+
Sbjct: 1358 SLHLWLLAPAVTFERISQQARTVIVASGTLEPIESLMSELGPSFARRLLPSPVRASHVVA 1417
Query: 139 KDQVFIGVL 147
Q+ I L
Sbjct: 1418 PAQLAIACL 1426
>gi|221503270|gb|EEE28968.1| DNA repair helicase, putative [Toxoplasma gondii VEG]
Length = 1649
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 21/112 (18%)
Query: 71 WYRKDRTPMSIKYT------------LHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVD 117
W +K R + K + L FW ++ F+ + + ARS+I TSGTLAP+
Sbjct: 622 WSKKKRAATASKESDAEVHAAAKPRCLAFWSMSPAPAFASLLLQGARSIICTSGTLAPLL 681
Query: 118 SFQSELGT----QFPIKLEANHVIDKDQVFIGVLGQ----GQKVFIGVLGQG 161
LGT +F I LE +HV+ Q+F VL Q V G+LG G
Sbjct: 682 PLAQRLGTPGRLKFSIFLENDHVVGPSQLFATVLSQVNLSAAAVASGLLGGG 733
>gi|237837507|ref|XP_002368051.1| hypothetical protein TGME49_031800 [Toxoplasma gondii ME49]
gi|211965715|gb|EEB00911.1| hypothetical protein TGME49_031800 [Toxoplasma gondii ME49]
gi|221509186|gb|EEE34755.1| hypothetical protein TGVEG_023970 [Toxoplasma gondii VEG]
Length = 2272
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQF-----PIKLEANHVID 138
+LH W L + F I + AR+VI+ SGTL P++S SELG F P + A+HV+
Sbjct: 1355 SLHLWLLAPAVTFERISQQARAVIVASGTLEPIESLMSELGPSFARRLLPSPVRASHVVA 1414
Query: 139 KDQVFIGVL 147
Q+ I L
Sbjct: 1415 PAQLAIACL 1423
>gi|91080377|ref|XP_975038.1| PREDICTED: similar to fanconi anemia group J protein [Tribolium
castaneum]
Length = 750
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
L+FWC + G + + + + VILTSGTLAP+ SEL + +++E H++ DQV
Sbjct: 411 VLNFWCFSPGFAMNMLMDRNIHCVILTSGTLAPLKPLISELELEIGVRIENPHIVKGDQV 470
Query: 143 FIGVLGQG 150
+ +L +G
Sbjct: 471 CVKILSKG 478
>gi|270006398|gb|EFA02846.1| regulator of telomere elongation helicase 1 [Tribolium castaneum]
Length = 1338
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 84 TLHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
L+FWC + G + + + + VILTSGTLAP+ SEL + +++E H++ DQV
Sbjct: 999 VLNFWCFSPGFAMNMLMDRNIHCVILTSGTLAPLKPLISELELEIGVRIENPHIVKGDQV 1058
Query: 143 FIGVLGQG 150
+ +L +G
Sbjct: 1059 CVKILSKG 1066
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 84 TLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
L +WC + G + + + VILTSGTLAP+ SEL +++E H++ DQ
Sbjct: 195 VLSYWCFSPGFGMNMLLDQGVHCVILTSGTLAPLKPLISELELNVGVRIENPHIVKGDQ- 253
Query: 143 FIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
V + +L +GP PL Y+N
Sbjct: 254 ----------VCVKILTKGPDGEPLNCNYQN 274
>gi|237840857|ref|XP_002369726.1| DNA repair helicase, putative [Toxoplasma gondii ME49]
gi|211967390|gb|EEB02586.1| DNA repair helicase, putative [Toxoplasma gondii ME49]
Length = 1649
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 21/115 (18%)
Query: 71 WYRKDRTPMSIKYT------------LHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVD 117
W +K R + K + L FW ++ F+ + + ARS+I TSGTLAP+
Sbjct: 622 WSKKKRAATASKESDAEVHAAAKPRCLAFWSMSPAPAFASLLLQGARSIICTSGTLAPLL 681
Query: 118 SFQSELGT----QFPIKLEANHVIDKDQVFIGVLGQ----GQKVFIGVLGQGPQN 164
LGT F I LE +HV+ Q+F VL Q V G+LG G +
Sbjct: 682 PLAQRLGTPGRLNFSIFLENDHVVGPSQLFATVLSQVNLSAAAVASGLLGGGEET 736
>gi|162462746|ref|NP_001104820.1| FancJ-like protein [Bombyx mori]
gi|161339205|dbj|BAF94023.1| FancJ-like protein [Bombyx mori]
Length = 851
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++ C++ ++F + + ARS+IL SGTL+PV S + ELG +F + NHVI +++V+
Sbjct: 553 SIRLLCMSPAVLFEGLTK-ARSIILASGTLSPVGSMKHELGAEFNVSC-LNHVISRERVW 610
Query: 144 IGVL 147
IG L
Sbjct: 611 IGTL 614
>gi|313233732|emb|CBY09902.1| unnamed protein product [Oikopleura dioica]
Length = 1145
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 87 FWCLN-SGLVFSDIRESARSVILTSGTLAPVDSFQSELG-----TQFPIKLEANHVIDKD 140
WC + S + + E A+S+ILTSGTL+P++ + S LG ++ P+ L HV+ D
Sbjct: 419 MWCFDPSKSITHLLDEGAKSIILTSGTLSPIEEYISNLGLDRHNSRLPVTLVNKHVVSSD 478
Query: 141 QVFIGVLGQG 150
QVF+ + +G
Sbjct: 479 QVFVATVPKG 488
>gi|313224365|emb|CBY20154.1| unnamed protein product [Oikopleura dioica]
Length = 976
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 12/81 (14%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSV---ILTSGTLAPVDSFQSELGTQFP--- 128
D M IK WC N+ DI + A V ILTSGTL+P+D + + LG P
Sbjct: 410 DSADMEIK----IWCFNASYSIDDITQGAEGVYNLILTSGTLSPLDEYINSLGLDRPTQL 465
Query: 129 --IKLEANHVIDKDQVFIGVL 147
I+L +HVID Q+F+ L
Sbjct: 466 KTIQLMNDHVIDSKQLFVTTL 486
>gi|42601324|gb|AAS21351.1| helicase-like protein NHL-like protein [Oikopleura dioica]
Length = 1016
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 12/81 (14%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSV---ILTSGTLAPVDSFQSELGTQFP--- 128
D M IK WC N+ DI + A V ILTSGTL+P+D + + LG P
Sbjct: 460 DSADMEIK----IWCFNASYSIDDITQGAEGVYNLILTSGTLSPLDEYINSLGLDRPTQL 515
Query: 129 --IKLEANHVIDKDQVFIGVL 147
I+L +HVID Q+F+ L
Sbjct: 516 KTIQLMNDHVIDSKQLFVTTL 536
>gi|401407959|ref|XP_003883428.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325117845|emb|CBZ53396.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 2564
Score = 53.1 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 42/133 (31%), Positives = 54/133 (40%), Gaps = 26/133 (19%)
Query: 32 ETEGESNRWYRKDRTPMRGIEPVVSQGPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLN 91
E EG+S R +RT + P GE +T LH W L
Sbjct: 1444 ELEGQSERHAEPERT----------RAP------GERETSTSTSKTLCLRNMCLHLWLLA 1487
Query: 92 SGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQF-----PIKLEANHVIDKDQVFIGV 146
+ F I AR+VI+ SGTL P++S SELG F P + A HV Q+ I
Sbjct: 1488 PAVTFERISAQARTVIVASGTLEPIESLMSELGPSFTRRLLPTPVRAGHVAAPAQLAIAC 1547
Query: 147 L-----GQGQKVF 154
L G+ VF
Sbjct: 1548 LRTMPIGESPSVF 1560
>gi|403223632|dbj|BAM41762.1| helicase [Theileria orientalis strain Shintoku]
Length = 954
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELG---TQFPIKLEANHVIDKD 140
++F CL F I RE RS+ILTSGTL P+D + +G +F IKL+ +HVID
Sbjct: 515 MNFACLQPIPTFIRIKREGLRSLILTSGTLGPLDVLERHIGGNYLKFEIKLQNDHVIDPK 574
Query: 141 QVFIGVL 147
+V+ GV+
Sbjct: 575 RVWAGVV 581
>gi|339246019|ref|XP_003374643.1| DNA repair helicase family protein [Trichinella spiralis]
gi|316972128|gb|EFV55819.1| DNA repair helicase family protein [Trichinella spiralis]
Length = 987
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 83 YTLHFWCLNSGLVFSDIRESA-RSVILTSGTLAPVDSFQSELGT------------QFPI 129
+++++WC ++G+ S + + RSVI+TSGTL+P+DSF +E+ FPI
Sbjct: 457 FSINYWCFSAGIGMSLLLKCQLRSVIVTSGTLSPLDSFVNEMRMCAASVLPVYFERPFPI 516
Query: 130 KLEANHVIDKDQVFIGVLGQG 150
+LE H++ +Q + G
Sbjct: 517 RLENCHIVKSEQYLFCICPSG 537
>gi|84997393|ref|XP_953418.1| helicase [Theileria annulata strain Ankara]
gi|65304414|emb|CAI76793.1| helicase, putative [Theileria annulata]
Length = 951
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 5/80 (6%)
Query: 73 RKDRTPMSIKYTLHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELG---TQFP 128
R+D T + I F CL F ++ + ARS+ILTSGTL P+D + LG +F
Sbjct: 523 REDNTEI-IPKVFWFKCLQPVPTFVRLKNAGARSIILTSGTLGPLDVLERHLGGGQVKFD 581
Query: 129 IKLEANHVIDKDQVFIGVLG 148
IKL+ HVID +V++G +
Sbjct: 582 IKLQNEHVIDPSRVWVGSIS 601
>gi|403358712|gb|EJY79009.1| Fanconi anemia group J protein [Oxytricha trifallax]
Length = 965
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+H +C N+ F I R++ S+ILTSG+L+P+ + EL +F + HVI K+Q+
Sbjct: 463 MHLYCFNAAFTFKQIQRKNPFSIILTSGSLSPISTVSYELDVKFDYIMTGGHVIQKNQIL 522
>gi|299470611|emb|CBN80233.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 932
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK--------LEANHV 136
L+ W ++ +VF ++ SVILTSGTL+P+ S ++ELG F + LEANHV
Sbjct: 239 LNIWLMSPSVVFDEVPAQTHSVILTSGTLSPLHSLRAELGRSFGERLLPFPQQALEANHV 298
Query: 137 IDKDQ 141
I+ ++
Sbjct: 299 INPER 303
>gi|393904465|gb|EFO18242.2| hypothetical protein LOAG_10252 [Loa loa]
Length = 533
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 29/40 (72%)
Query: 104 RSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
RSVI+TSGTL+P+DSF + LG FPI LE H + DQ+
Sbjct: 11 RSVIVTSGTLSPLDSFVNSLGISFPITLENEHAANLDQIL 50
>gi|221482942|gb|EEE21273.1| DNA repair helicase, putative [Toxoplasma gondii GT1]
Length = 1649
Score = 52.0 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 85 LHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGT----QFPIKLEANHVIDK 139
L FW ++ F+ + + ARS+I TSGTLAP+ LGT +F I LE +HV+
Sbjct: 648 LAFWSMSPAPAFASLLLQGARSIICTSGTLAPLLPLAQRLGTPGRLKFSIFLENDHVVGP 707
Query: 140 DQVFIGVLGQ----GQKVFIGVLGQGPQ 163
Q+F VL Q V G+LG G +
Sbjct: 708 SQLFATVLSQVNLSAAAVASGLLGGGEE 735
>gi|95007442|emb|CAJ20663.1| DNA repair helicase, putative [Toxoplasma gondii RH]
Length = 1250
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 9/88 (10%)
Query: 85 LHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGT----QFPIKLEANHVIDK 139
L FW ++ F+ + + ARS+I TSGTLAP+ LGT +F I LE +HV+
Sbjct: 381 LAFWSMSPAPAFASLLLQGARSIICTSGTLAPLLPLAQRLGTPGRLKFSIFLENDHVVGP 440
Query: 140 DQVFIGVLGQ----GQKVFIGVLGQGPQ 163
Q+F VL Q V G+LG G +
Sbjct: 441 SQLFATVLSQVNLSAAAVASGLLGGGEE 468
>gi|401396986|ref|XP_003879954.1| hypothetical protein NCLIV_004030 [Neospora caninum Liverpool]
gi|325114362|emb|CBZ49919.1| hypothetical protein NCLIV_004030 [Neospora caninum Liverpool]
Length = 1669
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 5/70 (7%)
Query: 85 LHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGT----QFPIKLEANHVIDK 139
L FW ++ F+ + + ARS+I TSGTLAP+ LGT +F I LE +HV+
Sbjct: 654 LAFWSMSPAPAFASLLLQGARSIICTSGTLAPLPPLAQRLGTPGLLKFSIFLENDHVVGP 713
Query: 140 DQVFIGVLGQ 149
+Q+F VL Q
Sbjct: 714 NQLFATVLSQ 723
>gi|378756742|gb|EHY66766.1| hypothetical protein NERG_00406 [Nematocida sp. 1 ERTm2]
Length = 690
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 7/98 (7%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQ---FPIKLEANHVIDKDQ 141
+ F L++ +F+ I E ARSVIL SGTL P +EL T+ F L A+H+I + Q
Sbjct: 372 ISFLLLHAAAIFNPIYEKARSVILLSGTLEPFQELVTELTTKKNSFKHFLSADHIISQSQ 431
Query: 142 VFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNTLVGDV 179
++ + Q V I QG ++ Y +TLV +
Sbjct: 432 LYTAEVSQYNSVPILGTYQGSKHPD----YISTLVSSI 465
>gi|67623207|ref|XP_667886.1| helicase [Cryptosporidium hominis TU502]
gi|54659060|gb|EAL37657.1| helicase, belonging to UvrD family [Cryptosporidium hominis]
Length = 1100
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 66 GESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELG 124
G N + + T + L FWC ++ S + RS+I+TSGTL+P+D+ +
Sbjct: 506 GGQNSFVDPETTDQGLSLYLSFWCFSAAAALSSLVSAGVRSMIITSGTLSPLDTLAQQFS 565
Query: 125 TQ---FPIKLEANHVIDKD-QVFIGVLGQG 150
+ F + LE +HVID + Q++ L +G
Sbjct: 566 SSNVTFDVFLENDHVIDSESQLWAATLERG 595
>gi|32398845|emb|CAD98555.1| similar to helicase-like protein nhl, possible [Cryptosporidium
parvum]
Length = 1100
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 66 GESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELG 124
G N + + T + L FWC ++ S + RS+I+TSGTL+P+D+ +
Sbjct: 506 GGQNSFVDPETTDQGLSLYLSFWCFSAAAALSSLVSAGVRSMIITSGTLSPLDTLAQQFS 565
Query: 125 TQ---FPIKLEANHVIDKD-QVFIGVLGQG 150
+ F + LE +HVID + Q++ L +G
Sbjct: 566 SSNVTFDVFLENDHVIDSESQLWAATLERG 595
>gi|66475604|ref|XP_627618.1| DNA repair helicase [Cryptosporidium parvum Iowa II]
gi|46229294|gb|EAK90143.1| DNA repair helicase [Cryptosporidium parvum Iowa II]
Length = 1108
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 66 GESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELG 124
G N + + T + L FWC ++ S + RS+I+TSGTL+P+D+ +
Sbjct: 514 GGQNSFVDPETTDQGLSLYLSFWCFSAAAALSSLVSAGVRSMIITSGTLSPLDTLAQQFS 573
Query: 125 TQ---FPIKLEANHVIDKD-QVFIGVLGQG 150
+ F + LE +HVID + Q++ L +G
Sbjct: 574 SSNVTFDVFLENDHVIDSESQLWAATLERG 603
>gi|241998210|ref|XP_002433748.1| conserved hypothetical protein [Ixodes scapularis]
gi|215495507|gb|EEC05148.1| conserved hypothetical protein [Ixodes scapularis]
Length = 280
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 89 CLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
CL+S + ++ R+++L SGTL+P S+++ELG +F K+ NHV+ + V I
Sbjct: 9 CLDSRYAMESVAKNTRTIVLASGTLSPTTSYEAELGLKFKHKIIGNHVVPPENVLI 64
>gi|384251189|gb|EIE24667.1| DNA repair helicase [Coccomyxa subellipsoidea C-169]
Length = 827
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI----KLEANHVIDK 139
TL F LN+G F + SA +V+L SGTLAPV S + +L P + HV+ K
Sbjct: 499 TLKFVLLNAGAHFVQVLASAHAVVLASGTLAPVSSLKQQLFPGLPATQLHQFSCGHVVPK 558
Query: 140 DQVFIGVLGQG 150
+++ LG+G
Sbjct: 559 ERLLAVALGRG 569
>gi|268569974|ref|XP_002640663.1| C. briggsae CBR-DOG-1 protein [Caenorhabditis briggsae]
Length = 869
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 104 RSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
RS+IL SGTL P+D+ ++ELG +F ++E + VI D +F VL G
Sbjct: 569 RSIILASGTLCPMDTLKTELGMEFKQQVEGDQVISPDNIFAAVLPIG 615
>gi|71029556|ref|XP_764421.1| DNA repair helicase [Theileria parva strain Muguga]
gi|68351375|gb|EAN32138.1| DNA repair helicase, putative [Theileria parva]
Length = 962
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 72 YRKDRTPMSIKYTLHFWCLNSGLVFSDIRESA-RSVILTSGTLAPVDSFQSELG---TQF 127
YR+D P I F CL F ++ RS+ILTSGTL P++ + LG +F
Sbjct: 521 YRED-IPEIIPKVFTFKCLQPVPTFVRLKNGGVRSIILTSGTLGPLEVLERHLGGGHVKF 579
Query: 128 PIKLEANHVIDKDQVFIGVLG 148
+KL+ HVID +V++G +
Sbjct: 580 DVKLQNEHVIDPSRVWVGAIS 600
>gi|429327451|gb|AFZ79211.1| hypothetical protein BEWA_020580 [Babesia equi]
Length = 1094
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK-----LEANHV 136
K L+ W LN L+F++I A S+I+ SGTL P+ + + LG F + L A V
Sbjct: 786 KLRLNLWLLNPSLIFNEIATHAYSIIIASGTLTPIQALVNSLGPAFATRLNNNILSATQV 845
Query: 137 IDKDQVFIGVL 147
+ DQ + +L
Sbjct: 846 LSPDQFMVFIL 856
>gi|91080379|ref|XP_975049.1| PREDICTED: similar to fanconi anemia group J protein [Tribolium
castaneum]
Length = 676
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 84 TLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
L +WC + G + + + VILTSGTLAP+ SEL +++E H++ DQ
Sbjct: 225 VLSYWCFSPGFGMNMLLDQGVHCVILTSGTLAPLKPLISELELNVGVRIENPHIVKGDQ- 283
Query: 143 FIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
V + +L +GP PL Y+N
Sbjct: 284 ----------VCVKILTKGPDGEPLNCNYQN 304
>gi|242003120|ref|XP_002422617.1| regulator of telomere elongation helicase 1 rtel1, putative
[Pediculus humanus corporis]
gi|212505418|gb|EEB09879.1| regulator of telomere elongation helicase 1 rtel1, putative
[Pediculus humanus corporis]
Length = 1016
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 14/91 (15%)
Query: 85 LHFWCLNSGL-VFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV- 142
+C N + S + ++S+I+TSGTL+P+ +F ELG P+ LE H+ K QV
Sbjct: 409 FSLYCFNPSFGIKSLLALGSQSIIITSGTLSPLRTFIYELGLPKPVTLENKHIAKKCQVP 468
Query: 143 FIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
F+ +LG G N+ + YKN
Sbjct: 469 FV------------ILGTGVNNVKMDGAYKN 487
>gi|324503421|gb|ADY41490.1| Regulator of telomere elongation helicase 1 [Ascaris suum]
Length = 993
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 84 TLHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
TL++WC + + + RS+I+TSGTL+P+ +F LG I LE +HV DQV
Sbjct: 451 TLNYWCFSPVVAMRYMHARGVRSIIVTSGTLSPLKAFIEVLGVDMRITLENDHVASSDQV 510
Query: 143 FIGVLGQGQKVFIGVLG 159
IG G + + G
Sbjct: 511 -IGACVYGDDNGLAICG 526
>gi|340385001|ref|XP_003390999.1| PREDICTED: regulator of telomere elongation helicase 1-like,
partial [Amphimedon queenslandica]
Length = 466
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSEL 123
L +WC N G ++ +R+ RSVILTSGTL+P++SF SEL
Sbjct: 425 LCYWCFNPGYAMTELVRQGVRSVILTSGTLSPLESFTSEL 464
>gi|145517083|ref|XP_001444430.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411841|emb|CAK77033.1| unnamed protein product [Paramecium tetraurelia]
Length = 905
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 65 QGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSEL 123
Q E N++ S + +++ WCL L FS + +S S++LTSGTL+P+ S+ EL
Sbjct: 455 QNEFNQYKLSFILDQSNQLSINMWCLEPSLAFSRLFSKSIYSILLTSGTLSPMPSWACEL 514
Query: 124 GTQFPIKLEANHVID 138
F ++L H+ID
Sbjct: 515 RIPFEVQLVNEHIID 529
>gi|429329870|gb|AFZ81629.1| DNA repair helicase, putative [Babesia equi]
Length = 956
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 65 QGESNRWYRKDRTPMSIKYT------------LHFWCLNSGLVFSDIR-ESARSVILTSG 111
Q ++ W K + +I+Y+ L+F CL + F I+ E RS+ILTSG
Sbjct: 486 QPATSGWNSKIKNRQTIQYSNTKNDTHILPKILNFECLQAVPTFLRIKDEGVRSIILTSG 545
Query: 112 TLAPVDSFQSELGTQ---FPIKLEANHVIDKDQVFIGVL 147
TLAP+ + ++G F IKL+ HVI+ +V+ G++
Sbjct: 546 TLAPLYVLEKQIGGNKLPFEIKLQNRHVIEPSRVWAGIV 584
>gi|403159247|ref|XP_003319882.2| hypothetical protein PGTG_00794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168014|gb|EFP75463.2| hypothetical protein PGTG_00794 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 826
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 68 SNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQF 127
S R D+ ++IKY L L++ FSDI ARSV+L GT+AP+D F S+L F
Sbjct: 528 SERSTASDQPTITIKYQL----LDASSSFSDIVSEARSVVLAGGTMAPLDDFHSQL---F 580
Query: 128 P-------IKLEANHVIDKDQVFIGVLGQG 150
P + +H++ + + + + +G
Sbjct: 581 PFVSPEKILDFSCSHIVPPEHLLVRAVSKG 610
>gi|159472757|ref|XP_001694511.1| ATP-dependent DNA helicase [Chlamydomonas reinhardtii]
gi|158276735|gb|EDP02506.1| ATP-dependent DNA helicase [Chlamydomonas reinhardtii]
Length = 897
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/29 (72%), Positives = 26/29 (89%)
Query: 110 SGTLAPVDSFQSELGTQFPIKLEANHVID 138
SGTLAP+DSF SELGT+F ++LEA HV+D
Sbjct: 425 SGTLAPLDSFASELGTEFHVRLEAPHVVD 453
>gi|399217948|emb|CCF74835.1| unnamed protein product [Babesia microti strain RI]
Length = 843
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 13/84 (15%)
Query: 77 TPMSIKYT--------LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQF- 127
+P+SI+ L W +G+V I A+S++LTSGTLAP++ + LG F
Sbjct: 518 SPLSIRLEAGTEGTPRLKLWLQRAGVVLDPISRKAKSLLLTSGTLAPLNVTSASLGESFV 577
Query: 128 ----PIKLEANHVIDKDQVFIGVL 147
LEA HVI K+Q + L
Sbjct: 578 KRLGKCTLEAGHVISKEQFALFTL 601
>gi|156088687|ref|XP_001611750.1| hypothetical protein [Babesia bovis T2Bo]
gi|154799004|gb|EDO08182.1| hypothetical protein BBOV_III006210 [Babesia bovis]
Length = 1062
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
Y+L W +N +FS++ +A+S+++ SGTL+P+ + S LG +F ++ N + Q+
Sbjct: 763 YSLGLWLMNPSAMFSELAANAKSIVIASGTLSPIPAMVSSLGPEFESRVNGNIISTTQQL 822
Query: 143 FIGVLG 148
G L
Sbjct: 823 DPGNLA 828
>gi|145512032|ref|XP_001441938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409199|emb|CAK74541.1| unnamed protein product [Paramecium tetraurelia]
Length = 927
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 84 TLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQV 142
T++ WCL L F I ++ SV+LTSGTL+P+ S+ EL F + + H+I+ Q
Sbjct: 472 TIYMWCLEPSLAFQRILSKNIHSVLLTSGTLSPLQSWTCELRMNFQTQFSSPHIINIQQN 531
Query: 143 FI 144
I
Sbjct: 532 LI 533
>gi|195420017|ref|XP_002060746.1| GK24077 [Drosophila willistoni]
gi|194156831|gb|EDW71732.1| GK24077 [Drosophila willistoni]
Length = 297
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 104 RSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
RSVILTSGTLAP+ +EL LE H++D+ QV++ ++G G
Sbjct: 10 RSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVYVKIIGTG 56
>gi|253742830|gb|EES99497.1| TFIIH basal transcription factor complex helicase subunit [Giardia
intestinalis ATCC 50581]
Length = 1060
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 78 PMSIKYTLHFWCLNSGLVFSDI--RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANH 135
P + +H C+ + I E RSVILTSGTLAP + Q+ELG F + + H
Sbjct: 604 PSQTGWQVHLLCMTPQSILKTIIMGERVRSVILTSGTLAPFSALQAELGLPFGVSISCPH 663
Query: 136 VIDKDQVFIGVL 147
++ V+
Sbjct: 664 IVPSSNYLFRVI 675
>gi|294892654|ref|XP_002774167.1| regulator of telomere elongation helicase 1 rtel1, putative
[Perkinsus marinus ATCC 50983]
gi|239879384|gb|EER05983.1| regulator of telomere elongation helicase 1 rtel1, putative
[Perkinsus marinus ATCC 50983]
Length = 1036
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 105 SVILTSGTLAPVDSFQSEL-GTQFPIKLEANHVIDKDQVFIGVLGQG 150
S+I+TSGTLAP+ F+ L G FPI LE +H+I DQV+ G++ G
Sbjct: 562 SLIVTSGTLAPLTEFKRGLRGVDFPIMLENDHIITFDQVWGGIICAG 608
>gi|156102350|ref|XP_001616868.1| DNA repair helicase [Plasmodium vivax Sal-1]
gi|148805742|gb|EDL47141.1| DNA repair helicase, putative [Plasmodium vivax]
Length = 1103
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 99 IRESARSVILTSGTLAPVDSFQSEL-GTQFPIK--LEANHVIDKDQVFIGVL 147
I+E SVI+TSGTL+P++ F +L G F K LE +HVI Q+F+G +
Sbjct: 511 IKEKVNSVIVTSGTLSPIEPFSKQLSGNYFSFKHILENDHVIKSHQLFVGCM 562
>gi|389585879|dbj|GAB68609.1| DNA repair helicase, partial [Plasmodium cynomolgi strain B]
Length = 1101
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 99 IRESARSVILTSGTLAPVDSFQSEL-GTQFPIK--LEANHVIDKDQVFIGVL 147
I+E SVI+TSGTL+P++ F +L G F K LE +HVI Q+F+G +
Sbjct: 511 IKEKVNSVIVTSGTLSPIEPFSKQLSGNYFSFKHILENDHVIKSHQLFVGCM 562
>gi|209878272|ref|XP_002140577.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
gi|209556183|gb|EEA06228.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
Length = 1091
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGT---QFPIKLEANHVID-K 139
L FWC + + + S RS+I+TSGTL+P+D+ + F + LE +HVI+
Sbjct: 535 LSFWCFSPAAALTSLVSSGVRSLIVTSGTLSPLDTLAQQFSCANFSFEVFLENDHVINGN 594
Query: 140 DQVFIGVLGQG 150
+Q+++ + QG
Sbjct: 595 EQLWVAAIEQG 605
>gi|403375820|gb|EJY87881.1| hypothetical protein OXYTRI_22467 [Oxytricha trifallax]
Length = 645
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 85 LHFWCLNSGLVFSDIRE-SARSVILTSGTLAPVDSFQSELGTQFPIKL 131
+H +C N+ +F DI+ + S+ILTSG+L + + SELGT F L
Sbjct: 459 MHLYCFNAAFIFKDIQNLNPFSLILTSGSLGEISTIASELGTNFDFTL 506
>gi|126340221|ref|XP_001373024.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
[Monodelphis domestica]
Length = 902
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 17/95 (17%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
+L F LN + F+ + + R+VI+ GT+ PV F+ +L GT+ ++ HVI
Sbjct: 595 SLRFLLLNPSVHFAQVVKECRAVIIAGGTMQPVADFREQLLECAGVGTERVVEFSCGHVI 654
Query: 138 DKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
D + VL GP N PL+ +Y+
Sbjct: 655 PPD-----------NILPIVLCSGPSNQPLEFIYQ 678
>gi|367047199|ref|XP_003653979.1| hypothetical protein THITE_2116525 [Thielavia terrestris NRRL 8126]
gi|347001242|gb|AEO67643.1| hypothetical protein THITE_2116525 [Thielavia terrestris NRRL 8126]
Length = 490
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Query: 67 ESNRWYRK-DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGT 125
E +Y K TP IK L + L+ FS I +AR+VIL GT++P D +++ L
Sbjct: 91 EGRIFYEKISSTPSDIK--LSYLLLSPTHAFSSIASAARAVILAGGTMSPFDDYRAHLFP 148
Query: 126 QFP----IKLEANHVIDKDQVFIGVLGQGQKVFIG 156
P L HVI +F+ L + + G
Sbjct: 149 TLPPDKITTLSCGHVIPSSNLFVWTLASTKPIPPG 183
>gi|221060536|ref|XP_002260913.1| DNA-repair helicase [Plasmodium knowlesi strain H]
gi|193810987|emb|CAQ42885.1| DNA-repair helicase, putative [Plasmodium knowlesi strain H]
Length = 1106
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSEL-GTQFPIK-- 130
D+ ++ + C ++ I +E S+I+TSGTL+P++ F +L G F K
Sbjct: 486 DKYNYTMSKNISLLCFSATASLCGILKEKVNSIIVTSGTLSPIEPFSKQLSGNYFSFKHI 545
Query: 131 LEANHVIDKDQVFIGVLGQ-GQKVFIGVLGQGPQNIPLQAL 170
LE +HVI Q+F+G + ++ + + +QAL
Sbjct: 546 LENDHVIKSHQLFVGCMTHYNNQILLSTYENRSNDNYIQAL 586
>gi|118383994|ref|XP_001025150.1| DNA repair helicase (rad3) [Tetrahymena thermophila]
gi|89306917|gb|EAS04905.1| DNA repair helicase (rad3) [Tetrahymena thermophila SB210]
Length = 1032
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVID-KDQV 142
L+ CLN L F I ++ ++ TSGTL P + +++EL F + LE HVID K Q+
Sbjct: 536 LNLTCLNPSLNFKKILQQDPHCLLFTSGTLKPFNFWKTELQIPFNVILENKHVIDSKKQL 595
Query: 143 FIGVL 147
F V+
Sbjct: 596 FSAVI 600
>gi|358054721|dbj|GAA99647.1| hypothetical protein E5Q_06350 [Mixia osmundae IAM 14324]
Length = 830
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 5/80 (6%)
Query: 76 RTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL-----GTQFPIK 130
R S +L + LN F I + ARSVIL GT++P+ F ++L Q P+
Sbjct: 518 RAADSSNVSLRYLLLNPADSFRSIVDDARSVILAGGTMSPLSDFDNQLFGHLAADQKPMA 577
Query: 131 LEANHVIDKDQVFIGVLGQG 150
L HV+ + + + V+ G
Sbjct: 578 LSCGHVVPRQNISVSVIRSG 597
>gi|353235657|emb|CCA67667.1| related to CHL1-protein of the DEAH box family [Piriformospora
indica DSM 11827]
Length = 769
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
TL + LN VF DI +SARSV+L GT+AP+ F S+L
Sbjct: 524 TLKYQLLNPSRVFRDIVDSARSVVLAGGTMAPMSDFHSQL 563
>gi|307210249|gb|EFN86899.1| TFIIH basal transcription factor complex helicase subunit
[Harpegnathos saltator]
Length = 735
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP + LHF CL+S + I + +SVI+TSGTL+P+D +
Sbjct: 399 DKTPTVLNPILHFSCLDSSIAIKPIFDRFQSVIITSGTLSPLDMY 443
>gi|307182232|gb|EFN69563.1| TFIIH basal transcription factor complex helicase subunit
[Camponotus floridanus]
Length = 759
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP + LHF CL+S + I + +SVI+TSGTL+P+D +
Sbjct: 423 DKTPTVLNPILHFSCLDSSIAVKPIFDRFQSVIITSGTLSPLDMY 467
>gi|31542614|ref|NP_031975.2| TFIIH basal transcription factor complex helicase XPD subunit [Mus
musculus]
gi|341940664|sp|O08811.2|ERCC2_MOUSE RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=CXPD; AltName: Full=DNA excision
repair protein ERCC-2; AltName: Full=DNA repair protein
complementing XP-D cells; AltName: Full=Xeroderma
pigmentosum group D-complementing protein
gi|26349935|dbj|BAC38607.1| unnamed protein product [Mus musculus]
gi|148691193|gb|EDL23140.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Mus musculus]
Length = 760
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|2114484|gb|AAB58296.1| DNA helicase [Mus musculus]
Length = 760
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|146741362|dbj|BAF62336.1| DNA-repair protein complementing XP-D cells [Sus scrofa]
Length = 756
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 419 DRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 463
>gi|159118615|ref|XP_001709526.1| TFIIH basal transcription factor complex helicase subunit [Giardia
lamblia ATCC 50803]
gi|157437643|gb|EDO81852.1| TFIIH basal transcription factor complex helicase subunit [Giardia
lamblia ATCC 50803]
Length = 1059
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 14/93 (15%)
Query: 83 YTLHFWCLNSGLVFSDIR--ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKD 140
+ +H C+ + I ES S++LTSGTLAP + Q+ELG F I + H++
Sbjct: 608 WQVHLLCMTPKSILKTIVLGESVHSLVLTSGTLAPFSALQAELGLSFGISVSCPHIVPPS 667
Query: 141 QVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
+ + G PL +YKN
Sbjct: 668 NYLF-------RAITAITG-----TPLLGIYKN 688
>gi|74219327|dbj|BAE26794.1| unnamed protein product [Mus musculus]
Length = 760
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|348557833|ref|XP_003464723.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Cavia porcellus]
Length = 760
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|291414826|ref|XP_002723661.1| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 2 protein [Oryctolagus
cuniculus]
Length = 713
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 376 DRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 420
>gi|21961619|gb|AAH34517.1| Ercc2 protein [Mus musculus]
Length = 739
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 402 DRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 446
>gi|22760335|dbj|BAC11156.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQK 152
+ SF SELG F I+LEANH++ QV++G +G G K
Sbjct: 1 MKSFSSELGVTFTIQLEANHIVKNSQVWVGTIGSGPK 37
>gi|395854142|ref|XP_003799557.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Otolemur garnettii]
Length = 682
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 345 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 389
>gi|296234101|ref|XP_002762285.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Callithrix jacchus]
Length = 682
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 345 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 389
>gi|12835975|dbj|BAB23443.1| unnamed protein product [Mus musculus]
Length = 593
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 256 DRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 300
>gi|289802977|ref|NP_001166280.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Rattus norvegicus]
gi|149056774|gb|EDM08205.1| rCG54110 [Rattus norvegicus]
Length = 760
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTITNPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|83405926|gb|AAI10523.1| ERCC2 protein [Homo sapiens]
Length = 682
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 345 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 389
>gi|397493361|ref|XP_003817576.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Pan paniscus]
Length = 682
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 345 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 389
>gi|154308671|ref|XP_001553671.1| hypothetical protein BC1G_07758 [Botryotinia fuckeliana B05.10]
Length = 724
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK----LEANHVIDK 139
TL F LN + F I SAR+VIL GT++P + S L P L HVI
Sbjct: 347 TLKFQLLNPAIHFDSIVSSARAVILAGGTMSPFSDYTSILFPSVPAHKIKTLSCGHVIPS 406
Query: 140 DQVFIGVLGQG 150
+F V+ +G
Sbjct: 407 SNLFASVVSKG 417
>gi|431909160|gb|ELK12750.1| TFIIH basal transcription factor complex helicase subunit [Pteropus
alecto]
Length = 736
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 399 DRTPTITNPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 443
>gi|403299023|ref|XP_003940292.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Saimiri boliviensis boliviensis]
Length = 704
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 367 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 411
>gi|345785629|ref|XP_541562.3| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit [Canis lupus familiaris]
Length = 760
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|410982712|ref|XP_003997692.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Felis catus]
Length = 760
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|296234099|ref|XP_002762284.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Callithrix jacchus]
Length = 760
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|395854140|ref|XP_003799556.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Otolemur garnettii]
Length = 760
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|355703655|gb|EHH30146.1| hypothetical protein EGK_10751 [Macaca mulatta]
Length = 760
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|21322260|gb|AAM45142.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D) [Homo
sapiens]
Length = 736
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 399 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 443
>gi|328853665|gb|EGG02802.1| hypothetical protein MELLADRAFT_38383 [Melampsora larici-populina
98AG31]
Length = 791
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP-------IKLEANHV 136
TL + LN F D+ ARSVIL GT+AP+ F+++L FP ++ H+
Sbjct: 485 TLRYQLLNPSETFRDVASEARSVILAGGTMAPISDFRTQL---FPYLGPDQFLEFACAHI 541
Query: 137 IDKDQVFIGVLGQG 150
+ ++ + + V+ G
Sbjct: 542 VPQENLLVRVVPHG 555
>gi|346986337|ref|NP_001231320.1| TFIIH basal transcription factor complex helicase XPD subunit
[Cricetulus griseus]
gi|2495145|sp|Q60452.1|ERCC2_CRIGR RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=CXPD; AltName: Full=DNA excision
repair protein ERCC-2; AltName: Full=DNA repair protein
complementing XP-D cells; AltName: Full=Xeroderma
pigmentosum group D-complementing protein
gi|604908|gb|AAC13749.1| nucleotide excision repair protein [Cricetulus griseus]
Length = 760
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|426389184|ref|XP_004061004.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Gorilla gorilla gorilla]
gi|83405523|gb|AAI10524.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Homo sapiens]
gi|119577745|gb|EAW57341.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 (xeroderma pigmentosum D),
isoform CRA_a [Homo sapiens]
gi|383416479|gb|AFH31453.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1 [Macaca mulatta]
Length = 760
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|338710190|ref|XP_001500524.3| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Equus caballus]
Length = 785
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 448 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 492
>gi|307686333|dbj|BAJ21097.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [synthetic construct]
Length = 760
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|297277341|ref|XP_002808245.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase subunit-like [Macaca mulatta]
Length = 739
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 399 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 443
>gi|15834617|ref|NP_000391.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1 [Homo sapiens]
gi|119540|sp|P18074.1|ERCC2_HUMAN RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=Basic transcription factor 2 80
kDa subunit; Short=BTF2 p80; AltName: Full=CXPD;
AltName: Full=DNA excision repair protein ERCC-2;
AltName: Full=DNA repair protein complementing XP-D
cells; AltName: Full=TFIIH basal transcription factor
complex 80 kDa subunit; Short=TFIIH 80 kDa subunit;
Short=TFIIH p80; AltName: Full=Xeroderma pigmentosum
group D-complementing protein
gi|17939382|gb|AAL48323.1| ERCC2 [Homo sapiens]
gi|82568960|gb|AAI08256.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Homo sapiens]
Length = 760
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|56118508|ref|NP_001008131.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Xenopus (Silurana) tropicalis]
gi|51703768|gb|AAH81339.1| ercc2 protein [Xenopus (Silurana) tropicalis]
Length = 760
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 74 KDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+DRTP LHF CL+S L + + +SVI+TSGTL+P+D +
Sbjct: 422 EDRTPSISNPVLHFSCLDSSLAIKPVFQRFQSVIITSGTLSPLDIY 467
>gi|297705154|ref|XP_002829448.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Pongo abelii]
Length = 724
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 387 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 431
>gi|426243940|ref|XP_004015798.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Ovis aries]
Length = 759
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 422 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 466
>gi|380799421|gb|AFE71586.1| TFIIH basal transcription factor complex helicase XPD subunit
isoform 1, partial [Macaca mulatta]
Length = 771
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 434 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 478
>gi|344269323|ref|XP_003406502.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Loxodonta africana]
Length = 845
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 505 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 549
>gi|350538411|ref|NP_001233519.1| TFIIH basal transcription factor complex helicase subunit [Pan
troglodytes]
gi|397493359|ref|XP_003817575.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Pan paniscus]
gi|343958692|dbj|BAK63201.1| TFIIH basal transcription factor complex helicase subunit [Pan
troglodytes]
Length = 760
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|157168345|ref|NP_001096787.1| TFIIH basal transcription factor complex helicase XPD subunit [Bos
taurus]
gi|182645388|sp|A6QLJ0.1|ERCC2_BOVIN RecName: Full=TFIIH basal transcription factor complex helicase XPD
subunit; AltName: Full=CXPD; AltName: Full=DNA excision
repair protein ERCC-2; AltName: Full=DNA repair protein
complementing XP-D cells; AltName: Full=Xeroderma
pigmentosum group D-complementing protein
gi|151556394|gb|AAI47983.1| ERCC2 protein [Bos taurus]
gi|296477395|tpg|DAA19510.1| TPA: TFIIH basal transcription factor complex helicase subunit [Bos
taurus]
Length = 760
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|402905923|ref|XP_003915757.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Papio anubis]
Length = 760
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|332026203|gb|EGI66345.1| TFIIH basal transcription factor complex helicase subunit
[Acromyrmex echinatior]
Length = 774
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP + LHF CL+S + I + +SV++TSGTL+P+D +
Sbjct: 438 DKTPTVLNPILHFSCLDSSIAIKPIFDRFQSVVITSGTLSPLDMY 482
>gi|119936449|gb|ABM06129.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 protein [Bos taurus]
Length = 773
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 436 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 480
>gi|351706985|gb|EHB09904.1| TFIIH basal transcription factor complex helicase subunit, partial
[Heterocephalus glaber]
Length = 759
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 422 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 466
>gi|403299021|ref|XP_003940291.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Saimiri boliviensis boliviensis]
Length = 782
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 445 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 489
>gi|296645|emb|CAA36463.1| ercc2 gene product [Homo sapiens]
Length = 730
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|380087536|emb|CCC05322.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 989
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDKD 140
L + L+ FS I ESAR+VIL GT++P + +++ L P L HVI K+
Sbjct: 643 LSYMLLSPTHAFSSIAESARAVILAGGTMSPFEDYKAHLFPDVPPEKITTLSCGHVIPKE 702
Query: 141 QVFIGVLG 148
+ + LG
Sbjct: 703 NLCVWTLG 710
>gi|55845886|gb|AAV66966.1| excision repair cross-complementing 2 [Canis lupus familiaris]
Length = 276
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 213 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 257
>gi|432108806|gb|ELK33414.1| TFIIH basal transcription factor complex helicase XPD subunit,
partial [Myotis davidii]
Length = 600
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 263 DRTPTITNPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 307
>gi|124808195|ref|XP_001348254.1| DNA-repair helicase, putative [Plasmodium falciparum 3D7]
gi|23497145|gb|AAN36693.1| DNA-repair helicase, putative [Plasmodium falciparum 3D7]
Length = 1160
Score = 45.4 bits (106), Expect = 0.009, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 99 IRESARSVILTSGTLAPVDSFQSEL-GTQFPIK--LEANHVIDKDQVFIGVL 147
I+E S+I+TSGTL+P++ F +L G F K LE +HVI Q+F+G +
Sbjct: 554 IKEKINSIIVTSGTLSPIEPFSKQLSGNYFSFKHILENDHVIKSHQLFVGCM 605
>gi|294887329|ref|XP_002772055.1| regulator of telomere elongation helicase 1 rtel1, putative
[Perkinsus marinus ATCC 50983]
gi|239875993|gb|EER03871.1| regulator of telomere elongation helicase 1 rtel1, putative
[Perkinsus marinus ATCC 50983]
Length = 946
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 18/89 (20%)
Query: 87 FWCLNSGLVFSDI--RESARSVILTSGTLAPVDSFQSEL-GTQFPIKLEANHVIDKDQVF 143
F C + G+ + E S+I+TSGTLAP+ F+ L G FPI LE +H+I
Sbjct: 456 FRCFSGGVAARKLLASEGILSLIVTSGTLAPLTEFKRGLRGVDFPIMLENDHII------ 509
Query: 144 IGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
++ G++ GP N+ L ++
Sbjct: 510 ---------IWGGIICAGPTNVKLNGSFR 529
>gi|441656294|ref|XP_004091106.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit [Nomascus leucogenys]
Length = 546
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 206 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 250
>gi|347831837|emb|CCD47534.1| similar to DNA helicase [Botryotinia fuckeliana]
Length = 598
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP---IK-LEANHVIDK 139
TL F LN + F I SAR+VIL GT++P + S L P IK L HVI
Sbjct: 221 TLKFQLLNPAIHFDSIVSSARAVILAGGTMSPFSDYTSILFPSVPAHKIKTLSCGHVIPS 280
Query: 140 DQVFIGVLGQG 150
+F V+ +G
Sbjct: 281 SNLFASVVSKG 291
>gi|336259278|ref|XP_003344441.1| hypothetical protein SMAC_08637 [Sordaria macrospora k-hell]
Length = 722
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDKD 140
L + L+ FS I ESAR+VIL GT++P + +++ L P L HVI K+
Sbjct: 598 LSYMLLSPTHAFSSIAESARAVILAGGTMSPFEDYKAHLFPDVPPEKITTLSCGHVIPKE 657
Query: 141 QVFIGVLG 148
+ + LG
Sbjct: 658 NLCVWTLG 665
>gi|355686451|gb|AER98062.1| excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Mustela putorius furo]
Length = 291
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 80 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 124
>gi|380014617|ref|XP_003691322.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Apis florea]
Length = 759
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP + LHF CL+S + I + +SV++TSGTL+P+D +
Sbjct: 423 DKTPNVLNPILHFVCLDSSIAMKPIFDRFQSVVITSGTLSPLDMY 467
>gi|328786210|ref|XP_396155.4| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Apis mellifera]
Length = 759
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP + LHF CL+S + I + +SV++TSGTL+P+D +
Sbjct: 423 DKTPNVLNPILHFVCLDSSIAMKPIFDRFQSVVITSGTLSPLDMY 467
>gi|34527746|dbj|BAC85446.1| unnamed protein product [Homo sapiens]
Length = 453
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 116 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 160
>gi|350400679|ref|XP_003485920.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Bombus impatiens]
Length = 777
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP + LHF CL+S + I + +SV++TSGTL+P+D +
Sbjct: 441 DKTPNVLNPILHFVCLDSSIAIKPIFDRFQSVVITSGTLSPLDMY 485
>gi|320165089|gb|EFW41988.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 950
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
K TL F LN G+ F D+ SAR+VIL GT+ P D+F ++L
Sbjct: 597 KSTLRFVMLNPGVHFRDVVGSARAVILAGGTMQPTDAFANQL 638
Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 2/39 (5%)
Query: 1 MTILSSRKHTCINDEV--LKAKENINDLCQELKETEGES 37
+ +L SRK+ C+ND+V L+A E IN+ C +L++ +S
Sbjct: 262 VVVLGSRKNLCVNDDVRKLEAVERINERCDDLRKNASKS 300
>gi|156050655|ref|XP_001591289.1| hypothetical protein SS1G_07915 [Sclerotinia sclerotiorum 1980]
gi|206557752|sp|A7ERG1.1|CHL1_SCLS1 RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|154692315|gb|EDN92053.1| hypothetical protein SS1G_07915 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 902
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 15/94 (15%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDK 139
TL F LN F I SAR++IL GT++P + S L P L HVI K
Sbjct: 533 TLKFQLLNPAPHFESIVSSARAIILAGGTMSPFSDYTSILFPSIPSHKITTLSCGHVIPK 592
Query: 140 DQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
+F + +GP IP + + N
Sbjct: 593 TH-----------LFASTVSRGPTGIPFKWTFAN 615
>gi|340710930|ref|XP_003394036.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Bombus terrestris]
Length = 759
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP + LHF CL+S + I + +SV++TSGTL+P+D +
Sbjct: 423 DKTPNVLNPILHFVCLDSSIAIKPIFDRFQSVVITSGTLSPLDMY 467
>gi|336466792|gb|EGO54956.1| hypothetical protein NEUTE1DRAFT_147626 [Neurospora tetrasperma
FGSC 2508]
gi|350288617|gb|EGZ69853.1| DNA repair helicase [Neurospora tetrasperma FGSC 2509]
Length = 1068
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDKD 140
L + L+ FS I ESAR+VIL GT++P + +++ L P L HVI D
Sbjct: 685 LSYMLLSPTHAFSSIAESARAVILAGGTMSPFEDYKAHLFPDVPPEKITTLSCGHVIPPD 744
Query: 141 QVFIGVLG 148
+ + LG
Sbjct: 745 NLCVWTLG 752
>gi|164429296|ref|XP_001728521.1| hypothetical protein NCU11409 [Neurospora crassa OR74A]
gi|206557740|sp|A7UXD4.1|CHL1_NEUCR RecName: Full=ATP-dependent RNA helicase chl-1; AltName:
Full=Chromosome loss protein 1
gi|157073424|gb|EDO65430.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1073
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDKD 140
L + L+ FS I ESAR+VIL GT++P + +++ L P L HVI D
Sbjct: 685 LSYMLLSPTHAFSSIAESARAVILAGGTMSPFEDYKAHLFPDVPPEKITTLSCGHVIPPD 744
Query: 141 QVFIGVLG 148
+ + LG
Sbjct: 745 NLCVWTLG 752
>gi|345492904|ref|XP_001602139.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Nasonia vitripennis]
Length = 869
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVID 138
L F LN F+DI + AR+V+L GT+ P+ F+ +L ++ + +HVI
Sbjct: 564 LKFLLLNPAAHFADIVQEARAVVLAGGTMEPMSEFKEQLFISAGAKSERIVTFSCDHVIP 623
Query: 139 KDQVFIGVLGQG 150
K+ + +L G
Sbjct: 624 KENILTCILKTG 635
>gi|170029991|ref|XP_001842874.1| fanconi anemia group J protein [Culex quinquefasciatus]
gi|167865334|gb|EDS28717.1| fanconi anemia group J protein [Culex quinquefasciatus]
Length = 873
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEA---NHVID 138
+ T+ + LN G F DI S RS+IL GT+ P+D +L ++E HV+
Sbjct: 570 RATMKYLLLNPGARFGDILGSCRSIILAGGTMHPIDELTEQLFKDCAERVEIRSYRHVVP 629
Query: 139 KDQVFIGVLGQG 150
D V +G+G
Sbjct: 630 ADAVLPLAIGKG 641
>gi|82752532|ref|XP_727340.1| DNA repair helicase [Plasmodium yoelii yoelii 17XNL]
gi|23483134|gb|EAA18905.1| DNA repair helicase, putative [Plasmodium yoelii yoelii]
Length = 1069
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 99 IRESARSVILTSGTLAPVDSFQSEL-GTQFPIK--LEANHVIDKDQVFIGVL 147
I+E S+I+TSGTL+PV+ F +L G+ F LE +HVI Q+F+G +
Sbjct: 509 IKEKVNSIIVTSGTLSPVEPFSKQLSGSYFSFHHILENDHVIKSHQLFVGCM 560
>gi|68069879|ref|XP_676851.1| DNA repair helicase [Plasmodium berghei strain ANKA]
gi|56496730|emb|CAH94015.1| DNA repair helicase, putative [Plasmodium berghei]
Length = 939
Score = 44.7 bits (104), Expect = 0.015, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 99 IRESARSVILTSGTLAPVDSFQSEL-GTQFPIK--LEANHVIDKDQVFIGVL 147
I+E S+I+TSGTL+PV+ F +L G+ F LE +HVI Q+F+G +
Sbjct: 379 IKEKVNSIIVTSGTLSPVEPFSKQLSGSYFSFHHILENDHVIKSHQLFVGCM 430
>gi|116179420|ref|XP_001219559.1| hypothetical protein CHGG_00338 [Chaetomium globosum CBS 148.51]
gi|88184635|gb|EAQ92103.1| hypothetical protein CHGG_00338 [Chaetomium globosum CBS 148.51]
Length = 979
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 77 TPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLE 132
TP IK L + L+ FS I SAR+VIL GT++P + +++ L FP L
Sbjct: 441 TPPDIK--LSYLLLSPTNAFSSIASSARAVILAGGTMSPFEDYKAHLFPSFPTDKITTLS 498
Query: 133 ANHVIDKDQVF 143
HVI +F
Sbjct: 499 CGHVIPSSNLF 509
>gi|383850774|ref|XP_003700951.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Megachile rotundata]
Length = 759
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D++P + LHF CL+S + I + +SV++TSGTL+P+D +
Sbjct: 423 DKSPTVLNPILHFSCLDSSIAMKPIFDRFQSVVITSGTLSPLDMY 467
>gi|340378232|ref|XP_003387632.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Amphimedon queenslandica]
Length = 886
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 80 SIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL--GTQFPI----KLEA 133
S + +L + LN + F+DI + AR+V+L GT+ P F+ +L G PI +
Sbjct: 555 SSQSSLKYLLLNPSVHFTDIVKEARAVVLAGGTMQPFSDFKEQLFTGAGVPIDRFFEFSC 614
Query: 134 NHVIDKDQVFIGVLGQG 150
HVI DQ+ L +G
Sbjct: 615 GHVIGDDQLLPLTLSKG 631
>gi|198412602|ref|XP_002126055.1| PREDICTED: similar to ERCC2/XPD gene product [Ciona intestinalis]
Length = 760
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP + LHF C+++ + + +SVI+TSGTL+P+D +
Sbjct: 423 DRTPTIVNPILHFSCMDASVAIKPVFSRFQSVIITSGTLSPLDMY 467
>gi|213511929|ref|NP_001133411.1| TFIIH basal transcription factor complex helicase subunit [Salmo
salar]
gi|209153902|gb|ACI33183.1| TFIIH basal transcription factor complex helicase subunit [Salmo
salar]
Length = 760
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 74 KDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+DRTP LHF C++ + + E +SVI+TSGTL+P+D +
Sbjct: 422 EDRTPTIANPVLHFSCMDPSIAIKPVFERFQSVIITSGTLSPLDIY 467
>gi|268570308|ref|XP_002648469.1| Hypothetical protein CBG24757 [Caenorhabditis briggsae]
Length = 558
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 71 WYRKDRTPMSIKYTLHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPI 129
+ RKD + IKY +C + + ++ R+V+L SGTL+P+ +F +G F
Sbjct: 17 YIRKDSGKLVIKY----FCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGA 72
Query: 130 KLEANHVIDKDQVFIGVLGQGQ 151
LE H + + V ++ +G+
Sbjct: 73 ILENEHALKQVPVLTSIVTRGK 94
>gi|268566755|ref|XP_002639805.1| C. briggsae CBR-BCH-1 protein [Caenorhabditis briggsae]
gi|229891627|sp|A8WS58.1|RTEL1_CAEBR RecName: Full=Regulator of telomere elongation helicase 1 homolog
Length = 994
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 71 WYRKDRTPMSIKYTLHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPI 129
+ RKD + IKY +C + + ++ R+V+L SGTL+P+ +F +G F
Sbjct: 453 YIRKDSGKLVIKY----FCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGA 508
Query: 130 KLEANHVIDKDQVFIGVLGQGQ 151
LE H + + V ++ +G+
Sbjct: 509 ILENEHALKQVPVLTSIVTRGK 530
>gi|443915597|gb|ELU36981.1| CHL1 helicase [Rhizoctonia solani AG-1 IA]
Length = 803
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
Query: 47 PMRGIEPVVSQGPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSV 106
P+ IE ++ + DE + + K +P + L + LN F ++ E ARSV
Sbjct: 467 PLHAIESLLLALANPDE---DGRIFLNKTGSPGAETVQLKYQLLNPSTHFREVVEKARSV 523
Query: 107 ILTSGTLAPV---DSFQSELGTQFP----IKLEANHVIDKDQVFIGVLGQGQK 152
+L GT++PV F ++L + P + HV+ K + VLG+G +
Sbjct: 524 VLAGGTMSPVIAIGDFHTQLFSYLPSDRLVVYSCGHVVPKSNIRTIVLGKGPR 576
>gi|395529687|ref|XP_003766940.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit [Sarcophilus harrisii]
Length = 539
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+RTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 315 ERTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 359
>gi|392577022|gb|EIW70152.1| hypothetical protein TREMEDRAFT_29466 [Tremella mesenterica DSM
1558]
Length = 840
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 21/99 (21%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP-------IKLEAN 134
K L + LN F ++ E ARSV+L GT+ P++ F +L FP I L +
Sbjct: 525 KLELRYILLNPAERFREVVEQARSVVLAGGTMEPINDFLRQL---FPFVTPSRIITLSCS 581
Query: 135 HVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
HVI K + V+ GP+ I L+ Y N
Sbjct: 582 HVIPKSN-----------LLTQVVSCGPRKIELEFKYSN 609
>gi|449664165|ref|XP_002163452.2| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Hydra magnipapillata]
Length = 759
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKL 131
D+TP +HF CL++ + + E +SV++TSGTL+PVD + L Q P+ +
Sbjct: 423 DQTPTIPNPIIHFCCLDASVAIKPVFERFQSVVITSGTLSPVDMYPKLLDFQ-PVNM 478
>gi|353442067|gb|AER00319.1| xeroderma pigmentosum group D, partial [Hydra vulgaris]
Length = 173
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLE 132
D+TP +HF CL++ + + E +SV++TSGTL+PVD + L Q P+ +
Sbjct: 2 DQTPTIPNPIIHFCCLDASVAIKPVFERFQSVVITSGTLSPVDMYPKLLDFQ-PVNMS 58
>gi|17506821|ref|NP_492769.1| Protein RTEL-1 [Caenorhabditis elegans]
gi|75018688|sp|Q93575.3|RTEL1_CAEEL RecName: Full=Regulator of telomere elongation helicase 1 homolog
gi|3876338|emb|CAB02102.1| Protein RTEL-1 [Caenorhabditis elegans]
Length = 994
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 82 KYTLHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKD 140
K T+ ++C + + ++ R+V+L SGTL+P+ +F +G F LE H + +
Sbjct: 462 KLTIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGAILENEHALKQV 521
Query: 141 QVFIGVLGQGQKVFIGVLGQGPQN 164
V ++ +G++ G L QN
Sbjct: 522 PVLTSIVTRGKR---GGLAGSFQN 542
>gi|157123196|ref|XP_001660054.1| regulator of telomere elongation helicase 1 rtel1 [Aedes aegypti]
gi|108874458|gb|EAT38683.1| AAEL009438-PA [Aedes aegypti]
Length = 873
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEA---NHVID 138
K T+ + LN G F +I S RS+IL GT+ PV+ +L P +++ HV+
Sbjct: 570 KSTMKYLLLNPGARFQEILSSCRSIILAGGTMQPVEELTEQLFKTCPERVQIRSYRHVVP 629
Query: 139 KDQVFIGVLGQG 150
D V + +G
Sbjct: 630 ADAVLPLAIAKG 641
>gi|380016559|ref|XP_003692248.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Apis
florea]
Length = 856
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVID 138
+ F LN + F DI AR+VIL GT+AP++ F +L + I +HVI
Sbjct: 549 MKFLLLNPAIHFHDIVRDARAVILAGGTMAPMNEFIEQLFIAAGAAPERIITFSCDHVIP 608
Query: 139 KDQVFIGVLGQG 150
++ + ++ G
Sbjct: 609 EENIICNIITHG 620
>gi|300120242|emb|CBK19796.2| unnamed protein product [Blastocystis hominis]
Length = 759
Score = 43.9 bits (102), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 15/78 (19%)
Query: 72 YRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP--- 128
Y KD P L F LN + F +I + RSVI+T GTL P F S+L FP
Sbjct: 457 YSKDNGPF-----LRFLLLNPSVYFKEIVDECRSVIITGGTLQPFSEFSSQL---FPHLS 508
Query: 129 ----IKLEANHVIDKDQV 142
+ L H++ D V
Sbjct: 509 QDRIVSLSLPHILSPDHV 526
>gi|444730736|gb|ELW71110.1| TFIIH basal transcription factor complex helicase XPD subunit
[Tupaia chinensis]
Length = 732
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + +SVI+TSGTL+P+D +
Sbjct: 395 DRTPTIANPILHFSCMDASLAIKPVFSRFQSVIITSGTLSPLDIY 439
>gi|308161158|gb|EFO63616.1| TFIIH basal transcription factor complex helicase subunit [Giardia
lamblia P15]
Length = 1060
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 85 LHFWCLNSGLVFSDIR--ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVI 137
+H C+ + I E S++LTSGTLAP + Q+ELG F I + H++
Sbjct: 611 VHLLCMTPKSILKTIMIGEGVHSLVLTSGTLAPFSALQAELGLPFNISVSCPHIV 665
>gi|312370938|gb|EFR19235.1| hypothetical protein AND_22844 [Anopheles darlingi]
Length = 807
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + I + +SV++TSGTL+P+D +
Sbjct: 421 DKTPTVPNPILHFSCLDSSIAMKPIFQRFQSVVITSGTLSPMDMY 465
>gi|341883785|gb|EGT39720.1| hypothetical protein CAEBREN_25454 [Caenorhabditis brenneri]
Length = 810
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 82 KYTLHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKD 140
K T+ ++C + + ++ R+V+L SGTL+P+ +F +G F LE H + +
Sbjct: 464 KLTIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGSILENEHALKQV 523
Query: 141 QVFIGVLGQGQK 152
V ++ +G++
Sbjct: 524 PVLTSIVTRGKR 535
>gi|347969002|ref|XP_311900.4| AGAP002988-PA [Anopheles gambiae str. PEST]
gi|333467742|gb|EAA08105.4| AGAP002988-PA [Anopheles gambiae str. PEST]
Length = 760
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP +HF CL+S + I + +SV++TSGTL+P+D +
Sbjct: 423 DKTPTVSNPIMHFSCLDSSIAMKPIFQRFQSVVITSGTLSPMDMY 467
>gi|604371|gb|AAA85822.1| ERCC2/XPD [Xiphophorus maculatus]
Length = 760
Score = 43.1 bits (100), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 74 KDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+DRTP LHF C++ + + + +SVI+TSGTL+P+D +
Sbjct: 422 EDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVIITSGTLSPLDIY 467
>gi|383850034|ref|XP_003700633.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Megachile rotundata]
Length = 861
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVID 138
+ F+ LN F DI + +R+VIL GT+AP++ F +L + + +HV+
Sbjct: 558 IKFFLLNPAAHFHDIVQDSRAVILAGGTMAPMNEFTEQLFIAAGAAPERIVTFSCDHVVP 617
Query: 139 KDQVFIGVLGQG 150
K+ + + G
Sbjct: 618 KENIICSIATHG 629
>gi|340931927|gb|EGS19460.1| hypothetical protein CTHT_0049210 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 918
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 77 TPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI------- 129
TP IK L + L+ FS I +AR+VIL GT++P D +++ L FP+
Sbjct: 548 TPSDIK--LSYLLLSPTHAFSSIVSAARAVILAGGTMSPFDDYKAHL---FPMLSEDKIT 602
Query: 130 KLEANHVIDKDQVFIGVLG 148
L HVI +F+ L
Sbjct: 603 TLSCGHVIPSSNLFVWTLA 621
>gi|443703659|gb|ELU01094.1| hypothetical protein CAPTEDRAFT_167887 [Capitella teleta]
Length = 786
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ + + + +SVI+TSGTL+P+D +
Sbjct: 449 DRTPTISNPILHFSCMDASIAIKPVFDRFQSVIITSGTLSPLDIY 493
>gi|440633923|gb|ELR03842.1| hypothetical protein GMDG_01371 [Geomyces destructans 20631-21]
Length = 874
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 67 ESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQ 126
E +Y KD P + L + L+ F +I AR+VIL GT++P+ + S L +
Sbjct: 546 EGRLFYAKD--PETSDIVLKYMLLDPTHHFQEIVSEARAVILAGGTMSPMADYTSHLLSY 603
Query: 127 FPIK----LEANHVIDKDQVFIGVLGQG 150
P + L HVI K+ + L +G
Sbjct: 604 LPAERITTLSCGHVIPKENLLAWTLSKG 631
>gi|387594391|gb|EIJ89415.1| hypothetical protein NEQG_00185 [Nematocida parisii ERTm3]
gi|387596770|gb|EIJ94391.1| hypothetical protein NEPG_01059 [Nematocida parisii ERTm1]
Length = 689
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL---GTQFPIKLEANHVIDKDQ 141
+ F L + + F I + ARSVIL SGTL P +EL F L A HVI Q
Sbjct: 370 VSFILLRAAVQFDPIYKMARSVILLSGTLQPFPELVNELTYNSGSFKYFLSAGHVISDSQ 429
Query: 142 VFIGVLGQ 149
++ +GQ
Sbjct: 430 LYTRTVGQ 437
>gi|156400058|ref|XP_001638817.1| predicted protein [Nematostella vectensis]
gi|156225941|gb|EDO46754.1| predicted protein [Nematostella vectensis]
Length = 735
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ + + + +SV++TSGTL+P+D +
Sbjct: 399 DRTPTIPNPILHFSCMDASIAVKPVFDRFQSVVITSGTLSPIDMY 443
>gi|198461164|ref|XP_002138964.1| GA25101 [Drosophila pseudoobscura pseudoobscura]
gi|198137257|gb|EDY69522.1| GA25101 [Drosophila pseudoobscura pseudoobscura]
Length = 418
Score = 42.7 bits (99), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 66 GESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
G N D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 63 GNGNNEPFDDKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 116
>gi|321248407|ref|XP_003191119.1| CHL1 helicase [Cryptococcus gattii WM276]
gi|317457586|gb|ADV19332.1| CHL1 helicase, putative [Cryptococcus gattii WM276]
Length = 854
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 8/76 (10%)
Query: 81 IKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHV 136
IKY L LN F ++ E ARSV+L GT+ P+ F +L P + L +HV
Sbjct: 536 IKYIL----LNPSERFKEVIEDARSVVLAGGTMEPITDFLQQLFPSIPKDRLLTLSCSHV 591
Query: 137 IDKDQVFIGVLGQGQK 152
I K+ + V+ G +
Sbjct: 592 IPKENLLTQVVSVGPR 607
>gi|334328785|ref|XP_003341121.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Monodelphis
domestica]
Length = 807
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+RTP LHF C+++ L + E +SVI+TSGTL+P++ +
Sbjct: 470 ERTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLEIY 514
>gi|302839689|ref|XP_002951401.1| hypothetical protein VOLCADRAFT_61293 [Volvox carteri f.
nagariensis]
gi|300263376|gb|EFJ47577.1| hypothetical protein VOLCADRAFT_61293 [Volvox carteri f.
nagariensis]
Length = 459
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI----KLEANHVIDKD 140
L + LN+ F+ I SARSV+L SGTL+PV+ ++L P HV+ ++
Sbjct: 259 LRYTVLNAATQFASIVNSARSVVLASGTLSPVEGLMAQLLPCVPPDRVRHFSCGHVVPRE 318
Query: 141 QVFIGVLGQG 150
+ V +G
Sbjct: 319 NLLALVAARG 328
>gi|121704642|ref|XP_001270584.1| DEAD_2 domain protein [Aspergillus clavatus NRRL 1]
gi|206558082|sp|A1CJ34.1|CHL1_ASPCL RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|119398730|gb|EAW09158.1| DEAD_2 domain protein [Aspergillus clavatus NRRL 1]
Length = 731
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 66 GESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGT 125
E +Y KD+ + +KY L L+ F +I E AR+VIL GT++P+ + + L
Sbjct: 394 AEGRLFYMKDQNDIQLKYLL----LDPTNHFREIVEDARAVILAGGTMSPMSDYMNHLFP 449
Query: 126 QFPIK----LEANHVIDKDQVFIGVLGQG 150
P HVI + + L QG
Sbjct: 450 YVPASRLDTFSYGHVIPPENLVAHTLAQG 478
>gi|389583177|dbj|GAB65913.1| DNA excision-repair helicase, partial [Plasmodium cynomolgi strain
B]
Length = 738
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEANHV 136
+ F CL+S + + + RSVILTSGT+ P++ +F++ L FP+ + N V
Sbjct: 439 VIQFACLDSSIAMKSVIKKYRSVILTSGTITPLELYPKLLNFKTVLTASFPMSFDRNCV 497
>gi|158301911|ref|XP_321585.4| AGAP001537-PA [Anopheles gambiae str. PEST]
gi|157012699|gb|EAA01808.4| AGAP001537-PA [Anopheles gambiae str. PEST]
Length = 910
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 74 KDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEA 133
KD + S+KY L LN G F DI +S RSV+L GT+ P + ++ ++
Sbjct: 595 KDLSQASMKYLL----LNPGGKFEDIVQSCRSVVLAGGTMQPTEELTEQVFRNCRERVTI 650
Query: 134 N---HVIDKDQVFIGVLGQG 150
HV+ KD V LG+G
Sbjct: 651 KSYPHVVPKDAVLPIALGRG 670
>gi|410910536|ref|XP_003968746.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Takifugu rubripes]
Length = 760
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 74 KDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+DRTP LHF C++ + + + +SV++TSGTL+P+D +
Sbjct: 422 EDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIY 467
>gi|348537926|ref|XP_003456443.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Oreochromis niloticus]
Length = 760
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 74 KDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+DRTP LHF C++ + + + +SV++TSGTL+P+D +
Sbjct: 422 EDRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIY 467
>gi|443709796|gb|ELU04301.1| hypothetical protein CAPTEDRAFT_175213 [Capitella teleta]
Length = 875
Score = 42.4 bits (98), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 17/142 (11%)
Query: 15 EVLKAKENINDLCQELKETEGESNRWYRKDRTPMRGIEPVVSQGPHADEYQGESNRWYRK 74
E+ ++K+N++D ++E ES + R +P+ IE + ++D +
Sbjct: 508 EISQSKDNVSDS----DKSEAESPAFPRS--SPLMQIESFLEALTNSDR-----DGRIVI 556
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI----- 129
+ P+ ++ F LN + FS+I AR+VIL GT+ PV+ F+ +L +
Sbjct: 557 TQQPLLSNCSVRFILLNPSVHFSEIIREARAVILAGGTMQPVNDFKEQLFKAAGVPEQRI 616
Query: 130 -KLEANHVIDKDQVFIGVLGQG 150
+ HVI Q+ L +G
Sbjct: 617 REFSCGHVIPPKQLLPIALARG 638
>gi|167527059|ref|XP_001747862.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773611|gb|EDQ87249.1| predicted protein [Monosiga brevicollis MX1]
Length = 812
Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANH 135
+ F LN + F +I +SAR+VI+ GT++PV F +L TQ + +H
Sbjct: 514 IRFLLLNPAVYFEEILQSARAVIVAGGTMSPVTDFVEQLTTQATKSVAVHH 564
>gi|195486599|ref|XP_002091573.1| GE12176 [Drosophila yakuba]
gi|194177674|gb|EDW91285.1| GE12176 [Drosophila yakuba]
Length = 769
Score = 42.4 bits (98), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 423 DKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 467
>gi|119495148|ref|XP_001264365.1| TFIIH complex helicase Rad3, putative [Neosartorya fischeri NRRL
181]
gi|119412527|gb|EAW22468.1| TFIIH complex helicase Rad3, putative [Neosartorya fischeri NRRL
181]
Length = 794
Score = 42.4 bits (98), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVI 137
LHF CL++ + + + SVI+TSGTL+P++ + LG FP L+ ++ +
Sbjct: 431 VLHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FPTVLQESYTM 482
>gi|194881824|ref|XP_001975021.1| GG22096 [Drosophila erecta]
gi|190658208|gb|EDV55421.1| GG22096 [Drosophila erecta]
Length = 769
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 423 DKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 467
>gi|44889982|emb|CAF32100.1| DNA repair helicase, putative [Aspergillus fumigatus]
Length = 767
Score = 42.4 bits (98), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVI 137
LHF CL++ + + + SVI+TSGTL+P++ + LG FP L+ ++ +
Sbjct: 404 VLHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FPTVLQESYTM 455
>gi|17137232|ref|NP_477178.1| xeroderma pigmentosum D, isoform B [Drosophila melanogaster]
gi|281363902|ref|NP_001163231.1| xeroderma pigmentosum D, isoform C [Drosophila melanogaster]
gi|4928442|gb|AAD33587.1|AF132140_1 excision repair protein ERCC2/XPD [Drosophila melanogaster]
gi|7291258|gb|AAF46689.1| xeroderma pigmentosum D, isoform B [Drosophila melanogaster]
gi|220945966|gb|ACL85526.1| Xpd-PB [synthetic construct]
gi|272432602|gb|ACZ94503.1| xeroderma pigmentosum D, isoform C [Drosophila melanogaster]
Length = 745
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 399 DKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 443
>gi|281183417|gb|ADA53577.1| RH28463p [Drosophila melanogaster]
Length = 781
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 435 DKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 479
>gi|194754721|ref|XP_001959643.1| GF11940 [Drosophila ananassae]
gi|190620941|gb|EDV36465.1| GF11940 [Drosophila ananassae]
Length = 770
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 422 DKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 466
>gi|38455500|gb|AAR20847.1| xeroderma pigmentosum D [Drosophila melanogaster]
gi|38455503|gb|AAR20849.1| xeroderma pigmentosum D [Drosophila melanogaster]
gi|38455507|gb|AAR20851.1| xeroderma pigmentosum D [Drosophila melanogaster]
gi|38455515|gb|AAR20856.1| xeroderma pigmentosum D [Drosophila melanogaster]
gi|38455523|gb|AAR20861.1| xeroderma pigmentosum D [Drosophila melanogaster]
Length = 685
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 339 DKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 383
>gi|195170160|ref|XP_002025881.1| GL10160 [Drosophila persimilis]
gi|198461162|ref|XP_002138963.1| GA25100 [Drosophila pseudoobscura pseudoobscura]
gi|194110745|gb|EDW32788.1| GL10160 [Drosophila persimilis]
gi|198137256|gb|EDY69521.1| GA25100 [Drosophila pseudoobscura pseudoobscura]
Length = 769
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 423 DKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 467
>gi|91079234|ref|XP_970844.1| PREDICTED: similar to Xeroderma pigmentosum D CG9433-PA [Tribolium
castaneum]
gi|270003570|gb|EFA00018.1| hypothetical protein TcasGA2_TC002825 [Tribolium castaneum]
Length = 759
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 423 DKTPTVSNPILHFSCLDSSIAIKPVFDRFQTVVITSGTLSPLDMY 467
>gi|70996012|ref|XP_752761.1| TFIIH complex helicase Rad3 [Aspergillus fumigatus Af293]
gi|66850396|gb|EAL90723.1| TFIIH complex helicase Rad3, putative [Aspergillus fumigatus Af293]
gi|159131515|gb|EDP56628.1| TFIIH complex helicase Rad3, putative [Aspergillus fumigatus A1163]
Length = 770
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVI 137
LHF CL++ + + + SVI+TSGTL+P++ + LG FP L+ ++ +
Sbjct: 407 VLHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG--FPTVLQESYTM 458
>gi|45551134|ref|NP_726036.2| xeroderma pigmentosum D, isoform A [Drosophila melanogaster]
gi|45445340|gb|AAM70857.2| xeroderma pigmentosum D, isoform A [Drosophila melanogaster]
Length = 769
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 423 DKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 467
>gi|38455518|gb|AAR20858.1| xeroderma pigmentosum D [Drosophila melanogaster]
Length = 685
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 339 DKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 383
>gi|38455521|gb|AAR20860.1| xeroderma pigmentosum D [Drosophila melanogaster]
Length = 685
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 339 DKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 383
>gi|195585328|ref|XP_002082441.1| GD11571 [Drosophila simulans]
gi|194194450|gb|EDX08026.1| GD11571 [Drosophila simulans]
Length = 769
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 423 DKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 467
>gi|195346339|ref|XP_002039723.1| GM15813 [Drosophila sechellia]
gi|194135072|gb|EDW56588.1| GM15813 [Drosophila sechellia]
Length = 769
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 423 DKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 467
>gi|432891078|ref|XP_004075537.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Oryzias latipes]
Length = 665
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C++ + + + +SV++TSGTL+P+D +
Sbjct: 424 DRTPTIANPVLHFSCMDPSIAIKPVFQRFQSVVITSGTLSPLDIY 468
>gi|38455510|gb|AAR20853.1| xeroderma pigmentosum D [Drosophila melanogaster]
Length = 685
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 339 DKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 383
>gi|300814608|ref|ZP_07094859.1| DEAD2 domain protein [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511227|gb|EFK38476.1| DEAD2 domain protein [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 765
Score = 42.0 bits (97), Expect = 0.099, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 70 RWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
++Y KD + + T+ CL+SG +F DI ++AR+ + S TL P+ + + LG
Sbjct: 484 QYYNKDFVSLKEENTIKILCLDSGDIFKDILKNARASVFFSATLEPLKYYGNLLG 538
>gi|405118752|gb|AFR93526.1| CHL1 helicase [Cryptococcus neoformans var. grubii H99]
Length = 853
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 81 IKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHV 136
IKY L LN F ++ E ARSVIL GT+ P+ F +L P L +HV
Sbjct: 540 IKYVL----LNPSERFKEVVEEARSVILAGGTMEPITDFLQQLFPSIPKDRLSTLSCSHV 595
Query: 137 IDKDQVFIGVLGQGQK 152
I K+ + V+ G +
Sbjct: 596 IPKENLLTQVVSVGPR 611
>gi|58264204|ref|XP_569258.1| CHL1 helicase [Cryptococcus neoformans var. neoformans JEC21]
gi|57223908|gb|AAW41951.1| CHL1 helicase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 849
Score = 42.0 bits (97), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 81 IKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHV 136
IKY L LN F ++ E ARSVIL GT+ P+ F +L P L +HV
Sbjct: 536 IKYVL----LNPSERFKEVVEEARSVILAGGTMEPITDFLQQLFPSIPKDRLSTLSCSHV 591
Query: 137 IDKDQVFIGVLGQGQK 152
I K+ + V+ G +
Sbjct: 592 IPKENLLTQVVSVGPR 607
>gi|443897877|dbj|GAC75216.1| helicase of the DEAD superfamily [Pseudozyma antarctica T-34]
Length = 1454
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 87 FWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDKDQV 142
+ LN F + + ARSVIL GT+ P+ F+ +L P ++ HVI +
Sbjct: 581 YQLLNPSHAFKSLVDEARSVILAGGTMEPLSDFRQQLLPFLPRDKLVEFSCGHVIPPSNL 640
Query: 143 FIGVLGQGQK 152
+ VLG K
Sbjct: 641 MVSVLGSSPK 650
>gi|119186659|ref|XP_001243936.1| conserved hypothetical protein [Coccidioides immitis RS]
Length = 757
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQ 126
LHF CL++ + + E SVI+TSGTL+P++ + LG Q
Sbjct: 393 VLHFTCLDAAIAIKPVFERFGSVIITSGTLSPLEMYPKMLGFQ 435
>gi|303317606|ref|XP_003068805.1| DNA repair helicase rad15 , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108486|gb|EER26660.1| DNA repair helicase rad15 , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320038802|gb|EFW20737.1| DNA repair helicase RAD3 [Coccidioides posadasii str. Silveira]
Length = 795
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQ 126
LHF CL++ + + E SVI+TSGTL+P++ + LG Q
Sbjct: 431 VLHFTCLDAAIAIKPVFERFGSVIITSGTLSPLEMYPKMLGFQ 473
>gi|392870657|gb|EAS32475.2| DNA repair helicase rad15 [Coccidioides immitis RS]
Length = 795
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQ 126
LHF CL++ + + E SVI+TSGTL+P++ + LG Q
Sbjct: 431 VLHFTCLDAAIAIKPVFERFGSVIITSGTLSPLEMYPKMLGFQ 473
>gi|164657658|ref|XP_001729955.1| hypothetical protein MGL_2941 [Malassezia globosa CBS 7966]
gi|159103849|gb|EDP42741.1| hypothetical protein MGL_2941 [Malassezia globosa CBS 7966]
Length = 891
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 87 FWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK----LEANHVIDKDQV 142
+ L+ G F + AR+++LT GT+ P+ F+++L + P + H++ +D V
Sbjct: 585 YLLLHPGDAFEPLVADARAIVLTGGTMEPISDFRTQLFSNLPDERLSLFSCGHIVPRDHV 644
Query: 143 FIGVLGQGQK 152
V+ G K
Sbjct: 645 LGAVVPVGPK 654
>gi|77682786|gb|ABB00673.1| EG:33C11.2 [Drosophila orena]
Length = 577
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEA---NHVIDKD 140
TL + L+ F+DI E ARS+++ GT+ P + +L T +L NHV+ D
Sbjct: 352 TLKYILLDPAEQFADIVEEARSIVIAGGTMQPTQELKEQLFTSCQDRLVERFYNHVVADD 411
Query: 141 QVFIGVLGQG 150
V V+ G
Sbjct: 412 AVLPFVISNG 421
>gi|322694417|gb|EFY86247.1| DEAD-2 domain-containing protein [Metarhizium acridum CQMa 102]
Length = 891
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 13/123 (10%)
Query: 32 ETEGESNRWYRKDRTPMRGIEPVVSQGPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLN 91
E+E S + K TP+ + +VS E +Y+K P+ L + L+
Sbjct: 492 ESENSSGKPATKSSTPV--LHTLVSFLAALTNPSTEGRIFYQKTSGPVQ-DVQLSYLLLS 548
Query: 92 SGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP-------IKLEANHVIDKDQVFI 144
FS I SAR+VIL GT++P D +++ L FP L HVI ++ + +
Sbjct: 549 PTHAFSSIVSSARAVILAGGTMSPFDDYKNHL---FPALADAKVTTLSCGHVIPRENLCV 605
Query: 145 GVL 147
L
Sbjct: 606 CTL 608
>gi|242025010|ref|XP_002432919.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518428|gb|EEB20181.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 852
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL-----GTQFPIKL-EANHVI 137
TL F LN F DI ++ARSVIL GT+ P+ F +L G+ +K+ HV+
Sbjct: 570 TLKFLLLNPASHFEDIVKNARSVILAGGTMQPISEFTDQLFYLAGGSPDRLKVFTCGHVV 629
Query: 138 DKDQVFIGVLGQGQ--KVF 154
K+ + ++ G KVF
Sbjct: 630 SKENILPIIVPSGPTGKVF 648
>gi|358338885|dbj|GAA57512.1| DNA excision repair protein ERCC-2, partial [Clonorchis sinensis]
Length = 731
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+R+P I L+F+C+++ L + SVI+TSGTL+P+D +
Sbjct: 350 ERSPTVINPVLYFYCMDASLPIRPVFSRFASVIITSGTLSPLDMY 394
>gi|390366297|ref|XP_003731011.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 1 [Strongylocentrotus purpuratus]
Length = 672
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF C+++ + + + +SV++TSGTL+P+D +
Sbjct: 424 DKTPTISNPVLHFSCMDASIAIKPVFDRFQSVVITSGTLSPLDMY 468
>gi|389638466|ref|XP_003716866.1| DNA repair helicase rad15 [Magnaporthe oryzae 70-15]
gi|351642685|gb|EHA50547.1| DNA repair helicase rad15 [Magnaporthe oryzae 70-15]
Length = 795
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + E ++VI+TSGTL+P++ + LG
Sbjct: 431 VLHFTCLDAAIAIKPVFERFKTVIITSGTLSPLEMYPKMLG 471
>gi|221054960|ref|XP_002258619.1| dna excision-repair helicase [Plasmodium knowlesi strain H]
gi|193808688|emb|CAQ39391.1| dna excision-repair helicase, putative [Plasmodium knowlesi strain
H]
Length = 1017
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEANHV 136
+ F CL+S + + +SV+LTSGT+ P++ +F++ L FPI + N V
Sbjct: 688 VIQFACLDSSIAMKSVINKYKSVVLTSGTITPLELYPKLLNFKTVLTASFPISFDRNCV 746
>gi|390366295|ref|XP_780825.3| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit isoform 2 [Strongylocentrotus purpuratus]
Length = 734
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF C+++ + + + +SV++TSGTL+P+D +
Sbjct: 424 DKTPTISNPVLHFSCMDASIAIKPVFDRFQSVVITSGTLSPLDMY 468
>gi|320166669|gb|EFW43568.1| nucleotide excision repair protein [Capsaspora owczarzaki ATCC
30864]
Length = 747
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFP 128
DRTP L+F C+++ L I + ++V++TSGTL+P++ +FQ F
Sbjct: 398 DRTPTIPNPVLYFSCMDASLAIKPIFDRFQTVVITSGTLSPIEMYPKILNFQPVTAQSFT 457
Query: 129 IKLEANHV 136
+ L N V
Sbjct: 458 MTLSRNCV 465
>gi|195382171|ref|XP_002049804.1| GJ20544 [Drosophila virilis]
gi|194144601|gb|EDW60997.1| GJ20544 [Drosophila virilis]
Length = 769
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP +HF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 423 DKTPTVSNPIMHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 467
>gi|195025610|ref|XP_001986090.1| GH20727 [Drosophila grimshawi]
gi|193902090|gb|EDW00957.1| GH20727 [Drosophila grimshawi]
Length = 769
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP +HF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 423 DKTPTVSNPIMHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 467
>gi|195123085|ref|XP_002006040.1| GI20811 [Drosophila mojavensis]
gi|193911108|gb|EDW09975.1| GI20811 [Drosophila mojavensis]
Length = 745
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP +HF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 399 DKTPTVSNPIMHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 443
>gi|402078170|gb|EJT73519.1| DNA repair helicase rad15 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 791
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + E ++VI+TSGTL+P++ + LG
Sbjct: 431 VLHFTCLDAAIAIKPVFERFKTVIITSGTLSPLEMYPKMLG 471
>gi|340376021|ref|XP_003386532.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Amphimedon queenslandica]
Length = 754
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFP 128
+R P LHF C+++G+ + + SVILTS T++P+D FQ L + +
Sbjct: 420 NRAPTIFNPILHFSCMDAGIAIKPVFDHYTSVILTSATISPLDMYPRLLRFQPALLSSYG 479
Query: 129 IKL 131
I L
Sbjct: 480 ISL 482
>gi|440472803|gb|ELQ41640.1| DNA repair helicase RAD3 [Magnaporthe oryzae Y34]
gi|440484308|gb|ELQ64395.1| DNA repair helicase RAD3 [Magnaporthe oryzae P131]
Length = 805
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + E ++VI+TSGTL+P++ + LG
Sbjct: 441 VLHFTCLDAAIAIKPVFERFKTVIITSGTLSPLEMYPKMLG 481
>gi|432863481|ref|XP_004070088.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Oryzias latipes]
Length = 859
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
++ F LN + F+++ + RSVI+ GT+ PV F+ EL G + ++ HVI
Sbjct: 579 SIKFLLLNPAVHFAEVLKECRSVIIAGGTMQPVSDFKEELLLSAGVGQERIVEFACGHVI 638
Query: 138 DKDQVFIGVLGQG 150
+ + V+ G
Sbjct: 639 PPENILPIVMCSG 651
>gi|380495771|emb|CCF32142.1| DNA repair helicase [Colletotrichum higginsianum]
Length = 896
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDKD 140
L + L+ FS I SAR+VIL GT++P D ++S L P L HVI
Sbjct: 544 LSYLLLSPTHAFSSIATSARAVILAGGTMSPFDDYKSHLFPYLPESKLTTLSCGHVIPPS 603
Query: 141 QVFIGVLGQGQ 151
+ + L Q
Sbjct: 604 NLCVWTLAGSQ 614
>gi|168063226|ref|XP_001783574.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664903|gb|EDQ51606.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 858
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK----LEANHVIDKD 140
L F LN+ F++I E AR+VIL GTL P+ + L Q P + H++ ++
Sbjct: 514 LKFIMLNATKHFTEIVEEARTVILAGGTLQPISELRDRLFPQLPHEKVHLFSCGHIVPRE 573
Query: 141 QVFIGVLGQG 150
+ + +G
Sbjct: 574 SILPIAIAKG 583
>gi|242024030|ref|XP_002432433.1| TFIIH basal transcription factor complex helicase subunit, putative
[Pediculus humanus corporis]
gi|212517866|gb|EEB19695.1| TFIIH basal transcription factor complex helicase subunit, putative
[Pediculus humanus corporis]
Length = 747
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+ P LHF CL+S + + + +SV++TSGTL+P+D +
Sbjct: 410 DKAPTVPNPILHFSCLDSSIAMKPVFDRFQSVVITSGTLSPLDMY 454
>gi|392591953|gb|EIW81280.1| DNA repair helicase [Coniophora puteana RWD-64-598 SS2]
Length = 867
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 18 KAKENINDLCQE--LKETEGES-NRWYRKDR--TPMRGIEPVVSQGPHADEYQGES--NR 70
K ++ C++ ++++E ES +R Y + + P+ IE ++ G A G +
Sbjct: 487 KVARKVSGYCEKEAIRKSEQESQHRTYTRGKGNPPLHAIESFIT-GISAASEDGRLILSL 545
Query: 71 WYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK 130
D + IKY L LN +F D+ + ARSV+L GT++P+ ++L FP
Sbjct: 546 GRESDASDSEIKYQL----LNPATIFRDVVDVARSVVLAGGTMSPISDVTNQL---FPYL 598
Query: 131 LEAN-------HVIDKDQVFIGVLGQG 150
+A+ H++ + V ++G+G
Sbjct: 599 SDASLSTFSCGHIVPQSHVQALLVGKG 625
>gi|260946235|ref|XP_002617415.1| hypothetical protein CLUG_02859 [Clavispora lusitaniae ATCC 42720]
gi|238849269|gb|EEQ38733.1| hypothetical protein CLUG_02859 [Clavispora lusitaniae ATCC 42720]
Length = 825
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKL----EANHVIDK 139
TL + L+ ++F D+ A+ V+L GT+ P+D F+S L P L +H+I K
Sbjct: 515 TLQYILLDPSIIFEDVLSQAKCVLLCGGTMEPMDDFKSYLFPNIPSNLVKTFTCDHLIPK 574
Query: 140 DQV 142
+ +
Sbjct: 575 ENL 577
>gi|350629867|gb|EHA18240.1| DNA repair helicase, subunit of TFIIH [Aspergillus niger ATCC 1015]
Length = 811
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + E SVI+TSGTL+P++ + LG
Sbjct: 441 VLHFTCLDAAIAIKPVFERFSSVIITSGTLSPLEMYPKMLG 481
>gi|145240349|ref|XP_001392821.1| DNA repair helicase rad15 [Aspergillus niger CBS 513.88]
gi|134077338|emb|CAK39953.1| unnamed protein product [Aspergillus niger]
Length = 801
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + E SVI+TSGTL+P++ + LG
Sbjct: 431 VLHFTCLDAAIAIKPVFERFSSVIITSGTLSPLEMYPKMLG 471
>gi|326430720|gb|EGD76290.1| hypothetical protein PTSG_00993 [Salpingoeca sp. ATCC 50818]
Length = 871
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 14/140 (10%)
Query: 35 GESNRWYR-KDRTPMRGIEPVVSQGPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSG 93
GES+ R K +P+RG++ + HADE R +D +L F LN
Sbjct: 524 GESSGALRSKHISPLRGVQAFIESLTHADEDGRIVVRRSGRD-------ASLQFMLLNPA 576
Query: 94 LVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKV 153
+ F ++ AR+V + GT+ + F L T L+ + G + G +
Sbjct: 577 IYFEEVLLKARAVAVVGGTMGSMSEFVQHLQTPKTRALKVS------TFSCGHVVNGNNI 630
Query: 154 FIGVLGQGPQNIPLQALYKN 173
GP N P + + N
Sbjct: 631 IALAATHGPTNEPFRFTFAN 650
>gi|169763188|ref|XP_001727494.1| DNA repair helicase rad15 [Aspergillus oryzae RIB40]
gi|83770522|dbj|BAE60655.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 794
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + E SVI+TSGTL+P++ + LG
Sbjct: 431 VLHFTCLDAAIAIKPVFERFSSVIITSGTLSPLEMYPKMLG 471
>gi|238489069|ref|XP_002375772.1| TFIIH complex helicase Rad3, putative [Aspergillus flavus NRRL3357]
gi|220698160|gb|EED54500.1| TFIIH complex helicase Rad3, putative [Aspergillus flavus NRRL3357]
gi|391869618|gb|EIT78813.1| RNA polymerase II transcription initiation [Aspergillus oryzae
3.042]
Length = 794
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + E SVI+TSGTL+P++ + LG
Sbjct: 431 VLHFTCLDAAIAIKPVFERFSSVIITSGTLSPLEMYPKMLG 471
>gi|401882732|gb|EJT46976.1| general RNA polymerase II transcription factor [Trichosporon asahii
var. asahii CBS 2479]
Length = 794
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEAN 134
HF CL+ L + + E SVI+TSGT++P+D FQ + +P+ L N
Sbjct: 433 FHFTCLDPSLAMAPVFERFSSVIITSGTISPLDMYPKMLQFQPVIQESYPMTLTRN 488
>gi|406700501|gb|EKD03668.1| general RNA polymerase II transcription factor [Trichosporon asahii
var. asahii CBS 8904]
Length = 550
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEAN 134
HF CL+ L + + E SVI+TSGT++P+D FQ + +P+ L N
Sbjct: 229 FHFTCLDPSLAMAPVFERFSSVIITSGTISPLDMYPKMLQFQPVIQESYPMTLTRN 284
>gi|405976070|gb|EKC40591.1| Putative ATP-dependent RNA helicase DDX11 [Crassostrea gigas]
Length = 921
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 15 EVLKAKENINDLCQELKETEGESN-RWYRKD---RTPMRGIEPVVSQGPHADEYQGESNR 70
E+ + KEN+ ++ET+ N R K R+P+ IE + AD+ R
Sbjct: 549 EIAQTKENL------VEETQTTDNTRQSEKAVVMRSPLAHIEGFFASLTSADK----DGR 598
Query: 71 WYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------G 124
T + + TL F +N + F D+ ARSV++ GT+ PV+ F+ +L G
Sbjct: 599 IVLTRHTLLK-ESTLKFLQMNPAVHFKDVLSQARSVVVAGGTMQPVEEFKQQLFYAAGIG 657
Query: 125 TQFPIKLEANHVIDKDQVFIGVLGQG 150
+ + HVI D + + G
Sbjct: 658 PENIHEYSCGHVIPSDHLLALAMKSG 683
>gi|350399366|ref|XP_003485501.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Bombus
impatiens]
Length = 858
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVID 138
+ F LN F DI AR+VIL GT+AP++ F +L ++ + +HVI
Sbjct: 552 IKFLLLNPAAHFHDIIRDARAVILAGGTMAPMNEFTDQLFIAAGASSERIVTYSCDHVIP 611
Query: 139 KDQVFIGVLGQG 150
++ + + G
Sbjct: 612 EENIVCSITTHG 623
>gi|326429202|gb|EGD74772.1| TFIIH basal transcription factor complex helicase XPD subunit
[Salpingoeca sp. ATCC 50818]
Length = 523
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DR P LHF C+++ L + E +SV++TSGTL+P++ +
Sbjct: 141 DRAPTIRDPVLHFSCMDASLAIRPVFERFQSVVITSGTLSPLEMY 185
>gi|157132567|ref|XP_001656074.1| DNA repair helicase rad3/xp-d [Aedes aegypti]
gi|108884369|gb|EAT48594.1| AAEL000404-PA [Aedes aegypti]
Length = 760
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LH C++S + I + +SV++TSGTL+P+D +
Sbjct: 423 DKTPTVSNPILHLSCMDSSIAMKPIFQRFQSVVITSGTLSPMDMY 467
>gi|156081706|ref|XP_001608346.1| DNA excision-repair helicase [Plasmodium vivax Sal-1]
gi|148800917|gb|EDL42322.1| DNA excision-repair helicase, putative [Plasmodium vivax]
Length = 1041
Score = 40.8 bits (94), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEANHV 136
+ F CL+S + + RSVILTSGT+ P++ +F++ L FP+ + N V
Sbjct: 712 VIQFACLDSSIAMKAVIGKYRSVILTSGTITPLELYPKLLNFKTVLTASFPMSFDRNCV 770
>gi|196006780|ref|XP_002113256.1| hypothetical protein TRIADDRAFT_50379 [Trichoplax adhaerens]
gi|190583660|gb|EDV23730.1| hypothetical protein TRIADDRAFT_50379 [Trichoplax adhaerens]
Length = 720
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DR P LHF C+++ + + + +SV++TSGTL+P+D +
Sbjct: 382 DRAPTIPDPVLHFSCMDASIAIKPVFDRFQSVVITSGTLSPLDMY 426
>gi|452822467|gb|EME29486.1| DNA excision repair protein ERCC-2 [Galdieria sulphuraria]
Length = 747
Score = 40.8 bits (94), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L CL++ L + R+VI+TSGTL+P+D + L + I N +++ V
Sbjct: 448 VLQLACLDASLAMMPVTRKFRNVIITSGTLSPLDFYPRMLNFRAAITASFNMSLNRRCVL 507
Query: 144 IGVLGQGQ 151
++G G+
Sbjct: 508 PLIIGMGE 515
>gi|348564904|ref|XP_003468244.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Cavia porcellus]
Length = 908
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL----GTQFP--IKLEANHVI 137
+L F LN + F+ + + R++++ GT+ PV F+ +L GTQ ++ HVI
Sbjct: 596 SLKFLLLNPAVQFAQVVKECRAMVIAGGTMQPVSDFREQLLAWAGTQSERVVEFSCGHVI 655
Query: 138 DKDQVFIGVLGQG 150
D + VL G
Sbjct: 656 PPDNILPLVLCSG 668
>gi|448537080|ref|XP_003871257.1| Rad3 protein [Candida orthopsilosis Co 90-125]
gi|380355614|emb|CCG25132.1| Rad3 protein [Candida orthopsilosis]
Length = 792
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK 130
LHF CL++ + + E SVI+TSGT++P+D + L Q I+
Sbjct: 443 LHFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPKMLNFQTVIQ 488
>gi|261334932|emb|CBH17926.1| helicase-like protein, putative [Trypanosoma brucei gambiense
DAL972]
Length = 965
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 89 CLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKL---EANHVIDKDQVFIG 145
CL+ L F I +A V+L SGTLAP +LG P + E HV K Q +G
Sbjct: 571 CLDGSLAFQHILSTAHRVVLASGTLAPFHQLGRDLGIP-PSSMATYEGLHVAQKHQYRLG 629
Query: 146 VL 147
VL
Sbjct: 630 VL 631
>gi|344278065|ref|XP_003410817.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Loxodonta africana]
Length = 904
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
+L F LN + F+ + + R+V++ GT+ PV F+ +L G + ++ HVI
Sbjct: 592 SLKFLLLNPAVHFTQVVKECRAVVIAGGTMQPVSDFREQLLACAGVGAERVVEFSCGHVI 651
Query: 138 DKDQVFIGVLGQG 150
D + ++ G
Sbjct: 652 PPDNILPLIICSG 664
>gi|354544295|emb|CCE41018.1| hypothetical protein CPAR2_300070 [Candida parapsilosis]
Length = 794
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK 130
LHF CL++ + + E SVI+TSGT++P+D + L Q I+
Sbjct: 443 LHFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPKMLNFQTVIQ 488
>gi|357624408|gb|EHJ75192.1| hypothetical protein KGM_19783 [Danaus plexippus]
Length = 736
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF C++S + + ++VI+TSGTL+P+D +
Sbjct: 399 DKTPTVSNPILHFSCMDSSIAMRPVFGRFQTVIITSGTLSPLDMY 443
>gi|71756165|ref|XP_828997.1| helicase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70834383|gb|EAN79885.1| helicase-like protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 1009
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 89 CLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKL---EANHVIDKDQVFIG 145
CL+ L F I +A V+L SGTLAP +LG P + E HV K Q +G
Sbjct: 615 CLDGSLAFQHILSTAHRVVLASGTLAPFHQLGRDLGIP-PSSMATYEGLHVAQKHQYRLG 673
Query: 146 VL 147
VL
Sbjct: 674 VL 675
>gi|313237854|emb|CBY12985.1| unnamed protein product [Oikopleura dioica]
Length = 479
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 105 SVILTSGTLAPVDSFQSEL-----GTQFPIKLEANHVIDKDQVFIGVLGQGQKV-FIGVL 158
++I TSGTL+PV+ + L G + + L +HVIDK+Q+F+ + + + F+ V
Sbjct: 217 NIICTSGTLSPVEDYARLLNLDHNGEREVVLLSNSHVIDKEQLFVATVANRENIEFLNVY 276
Query: 159 GQGPQNIPLQALYKNTLV 176
+N + Y+ +L
Sbjct: 277 A-NRENRQMHTAYRQSLA 293
>gi|294659657|ref|XP_462055.2| DEHA2G12056p [Debaryomyces hansenii CBS767]
gi|199434130|emb|CAG90541.2| DEHA2G12056p [Debaryomyces hansenii CBS767]
Length = 794
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK 130
LHF CL++ + + E SVI+TSGT++P+D + L Q I+
Sbjct: 442 LHFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPKMLNFQTVIQ 487
>gi|195469691|ref|XP_002099770.1| GE16539 [Drosophila yakuba]
gi|194187294|gb|EDX00878.1| GE16539 [Drosophila yakuba]
Length = 859
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEA---NHVIDKD 140
TL + L+ F+DI E AR++++ GT+ P + +L T +L NHV+ D
Sbjct: 562 TLKYILLDPAEQFADIVEEARAIVIAGGTMQPTQELKEQLFTSCQDRLVEHFYNHVVADD 621
Query: 141 QVFIGVLGQG 150
V V+ G
Sbjct: 622 AVLPFVISNG 631
>gi|194912339|ref|XP_001982483.1| GG12711 [Drosophila erecta]
gi|190648159|gb|EDV45452.1| GG12711 [Drosophila erecta]
Length = 859
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEA---NHVIDKD 140
TL + L+ F+DI E AR++++ GT+ P + +L T+ +L +HV++ D
Sbjct: 562 TLKYVLLDPAEQFADIVEEARAIVIAGGTMQPTQELKEQLFTRCQDRLVERFYDHVVEDD 621
Query: 141 QVFIGVLGQG 150
V V+ G
Sbjct: 622 AVLPFVISNG 631
>gi|336382459|gb|EGO23609.1| hypothetical protein SERLADRAFT_349743 [Serpula lacrymans var.
lacrymans S7.9]
Length = 848
Score = 40.4 bits (93), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 79 MSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK----LEAN 134
+ +KY L LN +F D+ + +R V+L GT++P+ ++L FP +
Sbjct: 533 VEVKYQL----LNPSTIFRDVADVSRCVVLAGGTMSPIQDVVNQLFAYFPTEKLSTFSCG 588
Query: 135 HVIDKDQVFIGVLGQGQK 152
H+I + V+G+G +
Sbjct: 589 HIIPASNIQALVVGKGPR 606
>gi|388854508|emb|CCF51895.1| related to CHL1-protein of the DEAH box family [Ustilago hordei]
Length = 931
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 87 FWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDKDQV 142
+ LN VF + + ARSVIL GT+ P+ F+ +L P + HVI +
Sbjct: 617 YQLLNPSHVFKSLVDEARSVILAGGTMEPISDFRQQLLPFLPSDRLVTFSCGHVIPPSNL 676
Query: 143 FIGVLGQGQK 152
+ VL K
Sbjct: 677 MVSVLSSSPK 686
>gi|440295138|gb|ELP88051.1| DNA repair helicase rad3/xp-D, putative [Entamoeba invadens IP1]
Length = 778
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+ C+++ ++ + + TSGTLAP+D+F LG N+V++K Q+
Sbjct: 433 LYLVCVDAANAAQNVLTKMHTTLFTSGTLAPLDTFIKLLGM--------NNVVEKKQIVS 484
Query: 145 GVLGQGQKV 153
V G G+++
Sbjct: 485 PVCGVGRRI 493
>gi|336369679|gb|EGN98020.1| hypothetical protein SERLA73DRAFT_56211 [Serpula lacrymans var.
lacrymans S7.3]
Length = 859
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 79 MSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK----LEAN 134
+ +KY L LN +F D+ + +R V+L GT++P+ ++L FP +
Sbjct: 544 VEVKYQL----LNPSTIFRDVADVSRCVVLAGGTMSPIQDVVNQLFAYFPTEKLSTFSCG 599
Query: 135 HVIDKDQVFIGVLGQGQK 152
H+I + V+G+G +
Sbjct: 600 HIIPASNIQALVVGKGPR 617
>gi|134107760|ref|XP_777491.1| hypothetical protein CNBB0650 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260183|gb|EAL22844.1| hypothetical protein CNBB0650 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 883
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 81 IKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHV 136
IKY L LN F ++ E ARSVIL GT+ P+ F +L P L +HV
Sbjct: 575 IKYVL----LNPSERFKEVVEEARSVILAGGTMEPITDFLQQLFPSIPKDRLSTLSCSHV 630
Query: 137 IDKDQVFIGVLGQGQK 152
I K + V+ G +
Sbjct: 631 IPKVNLLTQVVSVGPR 646
>gi|322706322|gb|EFY97903.1| DEAD-2 domain-containing protein [Metarhizium anisopliae ARSEF 23]
Length = 924
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 13/123 (10%)
Query: 32 ETEGESNRWYRKDRTPMRGIEPVVSQGPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLN 91
E E +S + K TP+ + +VS E +Y+K P L + L+
Sbjct: 525 ENENDSGKPGTKSSTPV--LHTLVSFLVALTNPSSEGRIFYQKTSGPAQ-DVQLSYLLLS 581
Query: 92 SGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP-------IKLEANHVIDKDQVFI 144
FS I SAR+VIL GT++P D +++ L FP L HVI ++ + +
Sbjct: 582 PTHAFSSIVSSARAVILAGGTMSPFDDYKNHL---FPALADPKVTTLSCGHVIPRENLCV 638
Query: 145 GVL 147
L
Sbjct: 639 WTL 641
>gi|307191862|gb|EFN75286.1| Probable ATP-dependent RNA helicase DDX11 [Harpegnathos saltator]
Length = 862
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL----GTQFP--IKLEANHVID 138
+ F LN F DI E ARSV+L GT+ P+ F +L G + +HVI
Sbjct: 562 IKFLLLNPAAHFHDIVEDARSVVLAGGTMEPMSEFIDQLFLMAGATIDRIMTFSCDHVIP 621
Query: 139 KDQVFIGVLGQG 150
K+ + V+ +G
Sbjct: 622 KENIISNVVMRG 633
>gi|320593951|gb|EFX06354.1| tfiih complex helicase [Grosmannia clavigera kw1407]
Length = 793
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + E SVI+TSGT++P++ + LG
Sbjct: 432 LHFTCLDAAIAIKPVFERFSSVIITSGTISPLEMYPKMLG 471
>gi|390367138|ref|XP_792082.3| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Strongylocentrotus purpuratus]
Length = 792
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL----GTQFPIKLE--ANHVI 137
+L F LN + F+D+ + AR++I+ GT+ PV+ F+ +L G Q LE HVI
Sbjct: 477 SLRFQLLNPAVHFTDVVKEARAIIVAGGTMQPVEDFKHQLFVCTGVQPERILEFSCGHVI 536
Query: 138 DKDQVFIGVLGQG 150
+ + L +G
Sbjct: 537 PPEHLLPISLSKG 549
>gi|340721189|ref|XP_003399007.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX11-like [Bombus terrestris]
Length = 857
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVID 138
+ F LN F DI AR+VIL GT+AP++ F +L ++ + +HVI
Sbjct: 553 IKFLLLNPAAHFHDIIRDARAVILAGGTMAPMNEFIDQLFIAAGASSERIVTYSCDHVIP 612
Query: 139 KDQVFIGVLGQG 150
++ + + G
Sbjct: 613 EENIVCSITTHG 624
>gi|332029639|gb|EGI69528.1| Putative ATP-dependent RNA helicase DDX11-like protein [Acromyrmex
echinatior]
Length = 857
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVID 138
+ F LN F DI + ARSV+L GT+ P+ F +L + + +HVI
Sbjct: 555 IKFLLLNPAAHFHDIVKDARSVVLAGGTMEPMSEFVDQLFLMAGATSDRIMTFSCDHVIP 614
Query: 139 KDQVFIGVLGQG 150
K+ + V+ +G
Sbjct: 615 KENIISNVITRG 626
>gi|405958071|gb|EKC24234.1| TFIIH basal transcription factor complex helicase subunit
[Crassostrea gigas]
Length = 1184
Score = 40.0 bits (92), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ + + + ++V++TSGTL+P++ +
Sbjct: 847 DRTPTISNPILHFSCMDASIAIKPVFDRFQTVVITSGTLSPLEMY 891
>gi|344299882|gb|EGW30235.1| DNA helicase component of transcription factor b [Spathaspora
passalidarum NRRL Y-27907]
Length = 792
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK 130
LHF CL++ + + E S+I+TSGT++P+D + L Q I+
Sbjct: 443 LHFTCLDASIAIKPVFERFYSIIITSGTISPLDMYPKMLNFQTVIQ 488
>gi|256088634|ref|XP_002580433.1| DNA repair helicase rad3/xp-d [Schistosoma mansoni]
Length = 764
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+RTP I L+F C+++ L I SVI+TSGTL+P++ +
Sbjct: 400 ERTPTIINPVLYFHCMDASLPIRPIMSRFTSVIITSGTLSPLEMY 444
>gi|170068974|ref|XP_001869063.1| TFIIH basal transcription factor complex helicase subunit [Culex
quinquefasciatus]
gi|167864971|gb|EDS28354.1| TFIIH basal transcription factor complex helicase subunit [Culex
quinquefasciatus]
Length = 542
Score = 40.0 bits (92), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP +H C++S + I + +SV++TSGTL+P+D +
Sbjct: 468 DKTPTVSNPIMHLSCMDSSIAMKPIFQRFQSVVITSGTLSPMDMY 512
>gi|389637597|ref|XP_003716432.1| DEAD_2 domain-containing protein [Magnaporthe oryzae 70-15]
gi|351642251|gb|EHA50113.1| DEAD_2 domain-containing protein [Magnaporthe oryzae 70-15]
Length = 921
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDKD 140
L + L+ FS I SAR+VIL GT++P +++ L P KL HVI
Sbjct: 547 LSYMLLSPTYAFSSIATSARAVILAGGTMSPFQDYETHLFPSHPQHKITKLSCGHVIPSS 606
Query: 141 QVFIGVLG 148
+ + L
Sbjct: 607 NLCVWTLA 614
>gi|453084907|gb|EMF12951.1| DNA repair helicase RAD3 [Mycosphaerella populorum SO2202]
Length = 806
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + E SVI+TSGT++P++ + LG
Sbjct: 431 VLHFTCLDAAIAIKPVFERFSSVIITSGTISPLEMYPKMLG 471
>gi|440487319|gb|ELQ67113.1| DEAD_2 domain-containing protein [Magnaporthe oryzae P131]
Length = 1493
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDKD 140
L + L+ FS I SAR+VIL GT++P +++ L P KL HVI
Sbjct: 1119 LSYMLLSPTYAFSSIATSARAVILAGGTMSPFQDYETHLFPSHPQHKITKLSCGHVIPSS 1178
Query: 141 QVFIGVLG 148
+ + L
Sbjct: 1179 NLCVWTLA 1186
>gi|255731468|ref|XP_002550658.1| DNA repair helicase RAD3 [Candida tropicalis MYA-3404]
gi|240131667|gb|EER31226.1| DNA repair helicase RAD3 [Candida tropicalis MYA-3404]
Length = 781
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK 130
LHF CL++ + + E SVI+TSGT++P+D + + Q I+
Sbjct: 443 LHFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPKMMNFQTVIQ 488
>gi|410907467|ref|XP_003967213.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Takifugu rubripes]
Length = 979
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
++ F LN + F+ I + R+V++ GT+ PV F+ EL G + ++ HVI
Sbjct: 667 SVKFLLLNPAVHFAQILKECRAVVIAGGTMQPVSDFKQELLFSAGVGEERIVEFSCGHVI 726
Query: 138 DKDQVFIGVLGQG 150
+ + VL G
Sbjct: 727 PPENILPLVLCNG 739
>gi|345480734|ref|XP_001605333.2| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Nasonia vitripennis]
Length = 759
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+ P L+F CL+S + I + +SV++TSGTL+P+D +
Sbjct: 423 DKAPTVHNPILYFSCLDSSIAMKPIFDRFQSVVITSGTLSPLDMY 467
>gi|260830571|ref|XP_002610234.1| hypothetical protein BRAFLDRAFT_286830 [Branchiostoma floridae]
gi|229295598|gb|EEN66244.1| hypothetical protein BRAFLDRAFT_286830 [Branchiostoma floridae]
Length = 763
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP L+F C+++ + + + +SV++TSGTL+P+D +
Sbjct: 423 DRTPTISNPILNFSCMDASIAIKPVFDRFQSVVITSGTLSPLDMY 467
>gi|440471332|gb|ELQ40355.1| DEAD_2 domain-containing protein [Magnaporthe oryzae Y34]
Length = 1458
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDKD 140
L + L+ FS I SAR+VIL GT++P +++ L P KL HVI
Sbjct: 1084 LSYMLLSPTYAFSSIATSARAVILAGGTMSPFQDYETHLFPSHPQHKITKLSCGHVIPSS 1143
Query: 141 QVFIGVLG 148
+ + L
Sbjct: 1144 NLCVWTLA 1151
>gi|410348526|gb|JAA40867.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 972
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAEHVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|282882456|ref|ZP_06291077.1| DEAD family protein [Peptoniphilus lacrimalis 315-B]
gi|281297598|gb|EFA90073.1| DEAD family protein [Peptoniphilus lacrimalis 315-B]
Length = 765
Score = 39.7 bits (91), Expect = 0.48, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 70 RWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
++Y KD + + T+ CL+SG +F D ++AR+ + S TL P+ + + LG
Sbjct: 484 QYYNKDFVSVKEENTIKILCLDSGDIFKDFLKNARASVFFSATLEPLKYYGNLLG 538
>gi|212531953|ref|XP_002146133.1| TFIIH complex helicase Rad3, putative [Talaromyces marneffei ATCC
18224]
gi|210071497|gb|EEA25586.1| TFIIH complex helicase Rad3, putative [Talaromyces marneffei ATCC
18224]
Length = 794
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
LH CL++ + F + E S+++TSGTL P+D F L
Sbjct: 431 VLHLACLDAAIAFRPVVERFSSIVVTSGTLTPLDMFPKML 470
>gi|126140148|ref|XP_001386596.1| DNA helicase component of transcription factor b [Scheffersomyces
stipitis CBS 6054]
gi|126093880|gb|ABN68567.1| DNA helicase component of transcription factor b [Scheffersomyces
stipitis CBS 6054]
Length = 793
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK 130
LHF CL++ + + E SVI+TSGT++P+D + + Q I+
Sbjct: 443 LHFICLDASIAIKPVFERFSSVIITSGTISPLDMYPKMMNFQTVIQ 488
>gi|123493892|ref|XP_001326390.1| helicase [Trichomonas vaginalis G3]
gi|121909304|gb|EAY14167.1| helicase, putative [Trichomonas vaginalis G3]
Length = 717
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 49/113 (43%), Gaps = 15/113 (13%)
Query: 63 EYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSE 122
E G +++ R T S+ Y L LN LVF+ + ++A+SV L GTL P ++
Sbjct: 397 EAMGNPDKYGRVIVTENSVSYML----LNPSLVFAQVAKTAKSVCLVGGTLQPFSDLTAQ 452
Query: 123 LGTQFPIKLEANHVIDKDQVFIGVLGQ---GQKVFIGVLGQGPQNIPLQALYK 172
L Q + I +D++F V G + L GP L Y+
Sbjct: 453 LIDQ--------NSIPEDRIFTHVNGHVILAENALTFCLHTGPNKEKLGFTYE 497
>gi|358370846|dbj|GAA87456.1| DNA repair helicase RAD3 [Aspergillus kawachii IFO 4308]
Length = 801
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGTL+P++ + LG
Sbjct: 431 VLHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG 471
>gi|242774370|ref|XP_002478428.1| TFIIH complex helicase Rad3, putative [Talaromyces stipitatus ATCC
10500]
gi|218722047|gb|EED21465.1| TFIIH complex helicase Rad3, putative [Talaromyces stipitatus ATCC
10500]
Length = 795
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LH CL++ + F + E S+++TSGTL P+D F L
Sbjct: 432 LHLACLDAAIAFRPVCERFSSIVVTSGTLTPLDMFPKMLN 471
>gi|346975762|gb|EGY19214.1| fanconi anemia group J protein [Verticillium dahliae VdLs.17]
Length = 838
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDKD 140
L + L+ FS I SAR+VIL GT++P D +++ L P L HVI
Sbjct: 504 LSYLLLSPTHAFSSIATSARAVILAGGTMSPFDDYRAHLFPYLPEPKLTTLRCGHVIPPS 563
Query: 141 QVFIGVLG 148
+ + L
Sbjct: 564 NLCVRTLA 571
>gi|295671522|ref|XP_002796308.1| DNA repair helicase RAD3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284441|gb|EEH40007.1| DNA repair helicase RAD3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 797
Score = 39.7 bits (91), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGTL+P++ + LG
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG 471
>gi|410348520|gb|JAA40864.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410348522|gb|JAA40865.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410348524|gb|JAA40866.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAEHVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|343425212|emb|CBQ68748.1| probable RAD3-DNA helicase/ATPase [Sporisorium reilianum SRZ2]
Length = 847
Score = 39.7 bits (91), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
HF CL++ L + + E SVI+TSGT++P+D + L
Sbjct: 467 FHFTCLDASLAIAPVFERFSSVIITSGTISPLDMYPKML 505
>gi|425770095|gb|EKV08569.1| TFIIH complex helicase Rad3, putative [Penicillium digitatum Pd1]
gi|425771642|gb|EKV10079.1| TFIIH complex helicase Rad3, putative [Penicillium digitatum PHI26]
Length = 794
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGTL+P++ + LG
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG 471
>gi|115492105|ref|XP_001210680.1| DNA repair helicase RAD3 [Aspergillus terreus NIH2624]
gi|114197540|gb|EAU39240.1| DNA repair helicase RAD3 [Aspergillus terreus NIH2624]
Length = 790
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGTL+P++ + LG
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG 471
>gi|213402977|ref|XP_002172261.1| DNA repair helicase RAD3 [Schizosaccharomyces japonicus yFS275]
gi|212000308|gb|EEB05968.1| DNA repair helicase RAD3 [Schizosaccharomyces japonicus yFS275]
Length = 773
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
LHF CL++ + + + RSVI+TSGTL+P++ + L
Sbjct: 431 VLHFACLDASIAIKPVFDKFRSVIITSGTLSPLNMYPKML 470
>gi|410212712|gb|JAA03575.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAEHVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|71020135|ref|XP_760298.1| hypothetical protein UM04151.1 [Ustilago maydis 521]
gi|46100007|gb|EAK85240.1| hypothetical protein UM04151.1 [Ustilago maydis 521]
Length = 850
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
HF CL++ L + + E SVI+TSGT++P+D + L
Sbjct: 467 FHFTCLDASLAIAPVFERFSSVIITSGTISPLDMYPKML 505
>gi|443898496|dbj|GAC75831.1| RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH, 5'-3' helicase subunit RAD3
[Pseudozyma antarctica T-34]
Length = 851
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
HF CL++ L + + E SVI+TSGT++P+D + L
Sbjct: 467 FHFTCLDASLAIAPVFERFSSVIITSGTISPLDMYPKML 505
>gi|315056317|ref|XP_003177533.1| DNA repair helicase RAD3 [Arthroderma gypseum CBS 118893]
gi|311339379|gb|EFQ98581.1| DNA repair helicase RAD3 [Arthroderma gypseum CBS 118893]
Length = 790
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGTL+P++ + LG
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG 471
>gi|388855689|emb|CCF50677.1| probable RAD3-DNA helicase/ATPase [Ustilago hordei]
Length = 847
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
HF CL++ L + + E SVI+TSGT++P+D + L
Sbjct: 467 FHFTCLDASLAIAPVFERFSSVIITSGTISPLDMYPKML 505
>gi|255941534|ref|XP_002561536.1| Pc16g12370 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586159|emb|CAP93907.1| Pc16g12370 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 795
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGTL+P++ + LG
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG 471
>gi|225681891|gb|EEH20175.1| TFIIH basal transcription factor complex helicase subunit
[Paracoccidioides brasiliensis Pb03]
Length = 773
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGTL+P++ + LG
Sbjct: 408 LHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG 447
>gi|326480373|gb|EGE04383.1| DNA repair helicase RAD3 [Trichophyton equinum CBS 127.97]
Length = 770
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGTL+P++ + LG
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG 471
>gi|296822250|ref|XP_002850254.1| DNA repair helicase RAD3 [Arthroderma otae CBS 113480]
gi|238837808|gb|EEQ27470.1| DNA repair helicase RAD3 [Arthroderma otae CBS 113480]
Length = 792
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGTL+P++ + LG
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG 471
>gi|226289058|gb|EEH44570.1| DNA repair helicase RAD3 [Paracoccidioides brasiliensis Pb18]
Length = 791
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGTL+P++ + LG
Sbjct: 441 LHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG 480
>gi|77682790|gb|ABB00675.1| EG:33C11.2 [Drosophila teissieri]
Length = 577
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEA---NHVIDKD 140
TL + L+ F+DI AR++++ GT+ P + +L T +L NHV++ D
Sbjct: 352 TLKYILLDPAEQFADIVAEARAIVIAGGTMQPTQELKEQLFTSCQDRLVERFYNHVVEDD 411
Query: 141 QVFIGVLGQG 150
V V+ G
Sbjct: 412 AVLPFVISNG 421
>gi|206558290|sp|A6ZWN8.1|CHL1_YEAS7 RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|151942784|gb|EDN61130.1| DEAH box protein [Saccharomyces cerevisiae YJM789]
Length = 861
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK----LEANHVID 138
Y++ + L F I A+ V+L GT+ P+ F S L + P K L NHVI
Sbjct: 556 YSIKYMLLEPSKPFESILNQAKCVVLAGGTMEPMSEFLSNLLPEVPSKDITTLSCNHVIP 615
Query: 139 KDQVFIGVLGQGQKVF 154
K+ + + Q + F
Sbjct: 616 KENLQTYITNQPELEF 631
>gi|326475278|gb|EGD99287.1| DNA repair helicase RAD3 [Trichophyton tonsurans CBS 112818]
Length = 789
Score = 39.3 bits (90), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGTL+P++ + LG
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG 471
>gi|349581808|dbj|GAA26965.1| K7_Chl1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 861
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK----LEANHVID 138
Y++ + L F I A+ V+L GT+ P+ F S L + P K L NHVI
Sbjct: 556 YSIKYMLLEPSKPFESILNQAKCVVLAGGTMEPMSEFLSNLLPEVPSKDITTLSCNHVIP 615
Query: 139 KDQVFIGVLGQGQKVF 154
K+ + + Q + F
Sbjct: 616 KENLQTYITNQPELEF 631
>gi|327294313|ref|XP_003231852.1| DNA repair helicase RAD3 [Trichophyton rubrum CBS 118892]
gi|326465797|gb|EGD91250.1| DNA repair helicase RAD3 [Trichophyton rubrum CBS 118892]
Length = 790
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGTL+P++ + LG
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG 471
>gi|319411548|emb|CBQ73592.1| related to CHL1-protein of the DEAH box family [Sporisorium
reilianum SRZ2]
Length = 932
Score = 39.3 bits (90), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 87 FWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDKDQV 142
+ LN VF + + ARSVIL GT+ P+ F+ +L P + HVI +
Sbjct: 612 YQLLNPSHVFKSLVDEARSVILAGGTMEPMSDFRQQLLPFVPPDRLVTFSCGHVIPPSNL 671
Query: 143 FIGVLGQGQK 152
+ VL K
Sbjct: 672 MVSVLSASPK 681
>gi|428170235|gb|EKX39162.1| ERCC2/XPD/Rad3 nucleotide excision repair [Guillardia theta
CCMP2712]
Length = 703
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+R P LH CL++ L + E +SV++TSGTL+P+D +
Sbjct: 405 ERLPNVPDPILHLACLDASLAIKPVFEHFQSVVITSGTLSPIDLY 449
>gi|401826548|ref|XP_003887367.1| Rad3-like DNA repair helicase [Encephalitozoon hellem ATCC 50504]
gi|395459885|gb|AFM98386.1| Rad3-like DNA repair helicase [Encephalitozoon hellem ATCC 50504]
Length = 742
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 36/68 (52%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
TL CL+S + S + R+VI+TSGT++P+D + L +E +D++ +
Sbjct: 409 TLRLACLDSSIAMSSVFGRFRNVIITSGTMSPIDMYPKILNFVSSRTVEIGATLDRNSIS 468
Query: 144 IGVLGQGQ 151
++ +G
Sbjct: 469 PLIITKGN 476
>gi|328770825|gb|EGF80866.1| hypothetical protein BATDEDRAFT_29908 [Batrachochytrium
dendrobatidis JAM81]
Length = 758
Score = 39.3 bits (90), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
LHF CL++ L + + SVI+TSGTL+P++ + LG + P+ E+ + F+
Sbjct: 427 LHFTCLDATLAIKPVFDRFSSVIITSGTLSPMELYPMLLGFE-PVVTESYQMTLTRTCFL 485
Query: 145 GVL 147
++
Sbjct: 486 PLI 488
>gi|357617927|gb|EHJ71072.1| putative DEAD/H [Danaus plexippus]
Length = 756
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 42/94 (44%), Gaps = 16/94 (17%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG---TQFPI--KLEANHVIDK 139
L + LN F+D+ RSVIL GT+ P+ FQ L TQ ++ HV+
Sbjct: 451 LKYLLLNPAEHFADVVSQCRSVILAGGTMEPISEFQELLASDKTQLDRVNVVKCGHVVPA 510
Query: 140 DQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKN 173
D V +G+ L +GP + L Y+N
Sbjct: 511 DNV-LGI----------CLSKGPSKLNLNFSYEN 533
>gi|441670170|ref|XP_004092177.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 [Nomascus
leucogenys]
Length = 970
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|302666624|ref|XP_003024909.1| hypothetical protein TRV_00914 [Trichophyton verrucosum HKI 0517]
gi|291188986|gb|EFE44298.1| hypothetical protein TRV_00914 [Trichophyton verrucosum HKI 0517]
Length = 765
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGTL+P++ + LG
Sbjct: 407 LHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG 446
>gi|302503364|ref|XP_003013642.1| hypothetical protein ARB_00089 [Arthroderma benhamiae CBS 112371]
gi|291177207|gb|EFE33002.1| hypothetical protein ARB_00089 [Arthroderma benhamiae CBS 112371]
Length = 749
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGTL+P++ + LG
Sbjct: 391 LHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMYPKMLG 430
>gi|182705254|sp|Q92771.3|DDX12_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DDX12; AltName:
Full=CHL1-related protein 2; Short=hCHLR2; AltName:
Full=DEAD/H box protein 12
Length = 950
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV +F+ +L + ++ HVI
Sbjct: 613 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSNFRQQLLACAGVEAERVVEFSCGHVI 672
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 673 PPDNILPLVICSG 685
>gi|146092080|ref|XP_001470201.1| helicase-like protein [Leishmania infantum JPCM5]
gi|134084995|emb|CAM69394.1| helicase-like protein [Leishmania infantum JPCM5]
Length = 1276
Score = 39.3 bits (90), Expect = 0.68, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI--KLEANHVIDK 139
++T+ CL+ L FS + ++ V+L SGTL+P +LG + + LE HV+
Sbjct: 794 QWTIDLRCLDGSLAFSYLLKTVHRVVLASGTLSPFPQLARDLGVEASLWRTLEGLHVVPP 853
Query: 140 DQVFIGVL 147
Q + L
Sbjct: 854 TQYSLTAL 861
>gi|164662899|ref|XP_001732571.1| hypothetical protein MGL_0346 [Malassezia globosa CBS 7966]
gi|159106474|gb|EDP45357.1| hypothetical protein MGL_0346 [Malassezia globosa CBS 7966]
Length = 837
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
HF CL++ L + + E SVI+TSGT++P+D + L
Sbjct: 453 FHFTCLDASLAIAPVFERFSSVIITSGTISPLDMYPKML 491
>gi|254571493|ref|XP_002492856.1| Conserved nuclear protein required to establish sister-chromatid
pairing during S-phase [Komagataella pastoris GS115]
gi|238032654|emb|CAY70677.1| Conserved nuclear protein required to establish sister-chromatid
pairing during S-phase [Komagataella pastoris GS115]
gi|328353133|emb|CCA39531.1| chromosome transmission fidelity protein 1 [Komagataella pastoris
CBS 7435]
Length = 811
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP---IKL-EANHVIDK 139
+L F L+ +F DI + +R VIL GT+ P++ + + L P IK+ +H+I K
Sbjct: 499 SLKFLLLDPSEIFQDIVDESRCVILAGGTMEPMEDYVNFLFKHTPRNKIKMFSCDHIIPK 558
Query: 140 DQVFIGVLGQG 150
+ + + L G
Sbjct: 559 NNLKVFALSNG 569
>gi|398018175|ref|XP_003862272.1| helicase-like protein [Leishmania donovani]
gi|322500501|emb|CBZ35578.1| helicase-like protein [Leishmania donovani]
Length = 1279
Score = 39.3 bits (90), Expect = 0.69, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI--KLEANHVIDK 139
++T+ CL+ L FS + ++ V+L SGTL+P +LG + + LE HV+
Sbjct: 795 QWTIDLRCLDGSLAFSYLLKTVHRVVLASGTLSPFPQLARDLGVEASLWRTLEGLHVVPP 854
Query: 140 DQVFIGVL 147
Q + L
Sbjct: 855 TQYSLTAL 862
>gi|41055526|ref|NP_957220.1| TFIIH basal transcription factor complex helicase subunit [Danio
rerio]
gi|29437217|gb|AAH49410.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 2 [Danio rerio]
Length = 643
Score = 39.3 bits (90), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 74 KDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+D+TP LHF C++ + + ++VI+TSGTL+P+D +
Sbjct: 422 EDKTPTIANPVLHFSCMDPSIAIKPVFGRFQTVIITSGTLSPLDIY 467
>gi|406606908|emb|CCH41762.1| chromosome transmission fidelity protein 1 [Wickerhamomyces
ciferrii]
Length = 814
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI-------KLEANHV 136
+L++ L+ +F +I E + VIL GT+ PV+ + + L FP K H+
Sbjct: 514 SLNYMLLDPSQIFKEIVEEVKCVILAGGTMEPVEDYTNYL---FPYLEPSKVNKFSCGHI 570
Query: 137 IDKDQVFIGVLGQGQKVFIGVLGQGPQNI-------PLQALYKNTLVGDV 179
I K+ + + ++ + + F G+ N+ L +L KN G V
Sbjct: 571 IPKENLNVFIIDKNKSEFEFSFGKRQDNLMKEDFGRSLCSLMKNVPAGMV 620
>gi|193608349|ref|XP_001949260.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like
[Acyrthosiphon pisum]
Length = 890
Score = 39.3 bits (90), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANH 135
K L F LN + F +I + ARSVI++ GT+ P+ F+ +L + + H
Sbjct: 580 KGVLKFLLLNPAVHFKEIVDKARSVIVSGGTMEPISEFKDQLFNFNGDNSDRIMHFSCGH 639
Query: 136 VIDKDQVFIGVLGQG 150
V+ D + ++ G
Sbjct: 640 VVPPDHILPLIVCSG 654
>gi|281204292|gb|EFA78488.1| transcription factor IIH component [Polysphondylium pallidum PN500]
Length = 694
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 76 RTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
+TP F CL++ + I + +SVI+TSGTL+P+D +Q L
Sbjct: 326 KTPNQYDPIFQFCCLDASIGMKPIFDKYKSVIITSGTLSPIDIYQKILN 374
>gi|260832748|ref|XP_002611319.1| hypothetical protein BRAFLDRAFT_210722 [Branchiostoma floridae]
gi|229296690|gb|EEN67329.1| hypothetical protein BRAFLDRAFT_210722 [Branchiostoma floridae]
Length = 692
Score = 39.3 bits (90), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
+L F LN L F +I + AR+VI+ GT+ PV F+ L Q + HVI
Sbjct: 382 SLRFLLLNPALHFREIVQQARAVIMAGGTMQPVSEFKEHLLFAAGVEPQRITEFSCGHVI 441
Query: 138 DKDQVFIGVLGQG 150
+ LG G
Sbjct: 442 PGCNLLPVALGSG 454
>gi|402885129|ref|XP_003906018.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Papio anubis]
Length = 845
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 533 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 592
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 593 PPDNILPLVICSG 605
>gi|402216420|gb|EJT96518.1| hypothetical protein DACRYDRAFT_25669, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 532
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLE-------ANHV 136
TL + LN F ++ + AR+V+L GT+ P+ F+++L FP LE HV
Sbjct: 410 TLCYQLLNPSPSFQEVVDEARAVVLAGGTMEPISDFRTQL---FPRLLENRFATFSCGHV 466
Query: 137 IDKDQVFIGVLGQGQK 152
+ K+ + + +G K
Sbjct: 467 VAKENLTALAVSRGPK 482
>gi|71018229|ref|XP_759345.1| hypothetical protein UM03198.1 [Ustilago maydis 521]
gi|46099195|gb|EAK84428.1| hypothetical protein UM03198.1 [Ustilago maydis 521]
Length = 1496
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 87 FWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDKDQV 142
+ LN VF + + ARSVIL GT+ P+ F+ +L P + H+I +
Sbjct: 615 YQLLNPSHVFRSLVDEARSVILAGGTMEPMSDFRQQLLPFVPPDRLVTFSCGHIIPASNL 674
Query: 143 FIGVLGQGQK 152
+ VL K
Sbjct: 675 MVSVLSASPK 684
>gi|60811280|gb|AAX36168.1| DEAD/H box polypeptide 11 [synthetic construct]
Length = 971
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|405117928|gb|AFR92703.1| general RNA polymerase II transcription factor [Cryptococcus
neoformans var. grubii H99]
Length = 773
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEANHVI 137
HF CL+ L + + + SV++TSGT++P+D FQ + +P+ L N +
Sbjct: 407 FHFTCLDPSLAIAPVFDRFASVVITSGTISPLDMYPKMLQFQPVMEQSYPMTLTRNAFL 465
>gi|332839867|ref|XP_003313867.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 3 [Pan
troglodytes]
Length = 972
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|29792240|gb|AAH50522.1| DDX11 protein [Homo sapiens]
Length = 970
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|325837281|ref|ZP_08166359.1| DEAD2 domain protein [Turicibacter sp. HGF1]
gi|325491055|gb|EGC93350.1| DEAD2 domain protein [Turicibacter sp. HGF1]
Length = 763
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 63 EYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSE 122
+Y ES R R +R + +K ++ CLN L S+ E RS IL S TL P+D +Q+
Sbjct: 486 DYFNESFRV-RYERFGIEVKVSI--VCLNPSLYLSEKMEKVRSTILFSATLHPLDYYQTV 542
Query: 123 L 123
L
Sbjct: 543 L 543
>gi|132566527|ref|NP_689651.1| probable ATP-dependent RNA helicase DDX11 isoform 3 [Homo sapiens]
gi|380420356|ref|NP_001244073.1| probable ATP-dependent RNA helicase DDX11 isoform 3 [Homo sapiens]
gi|74731686|sp|Q96FC9.1|DDX11_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX11; AltName:
Full=CHL1-related protein 1; Short=hCHLR1; AltName:
Full=DEAD/H box protein 11; AltName: Full=Keratinocyte
growth factor-regulated gene 2 protein; Short=KRG-2
Length = 970
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|293376861|ref|ZP_06623080.1| DEAD2 domain protein [Turicibacter sanguinis PC909]
gi|292644555|gb|EFF62646.1| DEAD2 domain protein [Turicibacter sanguinis PC909]
Length = 763
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 63 EYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSE 122
+Y ES R R +R + +K ++ CLN L S+ E RS IL S TL P+D +Q+
Sbjct: 486 DYFNESFRV-RYERFGIEVKVSI--VCLNPSLYLSEKMEKVRSTILFSATLHPLDYYQTV 542
Query: 123 L 123
L
Sbjct: 543 L 543
>gi|167536176|ref|XP_001749760.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771687|gb|EDQ85349.1| predicted protein [Monosiga brevicollis MX1]
Length = 798
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DR P L F C+++ L + + +SVI+TSGTL+P+D +
Sbjct: 441 DRAPSVPDPVLRFTCMDASLAVKPVFDRFQSVIITSGTLSPLDMY 485
>gi|195430790|ref|XP_002063431.1| GK21904 [Drosophila willistoni]
gi|194159516|gb|EDW74417.1| GK21904 [Drosophila willistoni]
Length = 769
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP L+F C++S + + + ++V++TSGTL+P+D +
Sbjct: 423 DKTPTVSNPILYFSCMDSSIAMAPVFSRFQTVVITSGTLSPMDMY 467
>gi|351702333|gb|EHB05252.1| Putative ATP-dependent RNA helicase DDX11-like protein
[Heterocephalus glaber]
Length = 953
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
+L F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 620 SLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFREQLLACAGVEAERVVEFSCGHVI 679
Query: 138 DKDQVFIGVLGQG 150
D + VL G
Sbjct: 680 PPDNILPLVLCSG 692
>gi|156836024|ref|XP_001642254.1| hypothetical protein Kpol_187p1 [Vanderwaltozyma polyspora DSM
70294]
gi|206557738|sp|A7TTL0.1|CHL1_VANPO RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|156112733|gb|EDO14396.1| hypothetical protein Kpol_187p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 829
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 21/141 (14%)
Query: 31 KETEGESNRWYRKDRTPMR-GIEPVVSQGPHADEYQGESNRWYRKDRTPMSIKYTLHFWC 89
KE++ E+N + TP+ + +S + +E E ++ K++ SIKY L
Sbjct: 482 KESDNENNEESKNKSTPLLFKVASFLSSLTNPNE---EGKFFFEKNK---SIKYML---- 531
Query: 90 LNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP-------IKLEANHVIDKDQV 142
L F I + AR VIL GT+ P+ F L FP + +HVI D +
Sbjct: 532 LEPSQSFKSILDEARCVILAGGTMEPISDFFDNL---FPDIIKDKSVTFACDHVIPDDNL 588
Query: 143 FIGVLGQGQKVFIGVLGQGPQ 163
++ + + F Q P+
Sbjct: 589 NTYIIEEPKFEFTFDKRQNPE 609
>gi|321249881|ref|XP_003191608.1| general RNA polymerase II transcription factor [Cryptococcus gattii
WM276]
gi|317458075|gb|ADV19821.1| general RNA polymerase II transcription factor, putative
[Cryptococcus gattii WM276]
Length = 799
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEANHVI 137
HF CL+ L + + + SV++TSGT++P+D FQ + +P+ L N +
Sbjct: 433 FHFTCLDPSLAIAPVFDRFASVVITSGTISPLDMYPKMLQFQPVMEQSYPMTLTRNAFL 491
>gi|453084594|gb|EMF12638.1| DNA repair helicase [Mycosphaerella populorum SO2202]
Length = 838
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 71 WYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP-- 128
W + D T +++KY L L+ F +I E AR+VIL GT++P++ ++ +L FP
Sbjct: 524 WVKYDGT-IAVKYML----LDPAEHFRNIVEEARAVILAGGTMSPMEDYKQQL---FPYL 575
Query: 129 ---IKLEANHVIDKDQVFIGVLGQGQ 151
H+I +F+ + Q
Sbjct: 576 DDITTFSCGHLIPSSNLFVRTITSDQ 601
>gi|383410919|gb|AFH28673.1| putative ATP-dependent RNA helicase DDX11 isoform 1 [Macaca
mulatta]
Length = 906
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|355785871|gb|EHH66054.1| hypothetical protein EGM_02957 [Macaca fascicularis]
Length = 906
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|355563978|gb|EHH20478.1| hypothetical protein EGK_03343 [Macaca mulatta]
Length = 906
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|58258935|ref|XP_566880.1| general RNA polymerase II transcription factor [Cryptococcus
neoformans var. neoformans JEC21]
gi|134107057|ref|XP_777841.1| hypothetical protein CNBA5380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260539|gb|EAL23194.1| hypothetical protein CNBA5380 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223017|gb|AAW41061.1| general RNA polymerase II transcription factor, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 799
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEANHVI 137
HF CL+ L + + + SV++TSGT++P+D FQ + +P+ L N +
Sbjct: 433 FHFTCLDPSLAIAPVFDRFASVVITSGTISPLDMYPKMLQFQPVMEQSYPMTLTRNAFL 491
>gi|426372116|ref|XP_004052976.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein 8
[Gorilla gorilla gorilla]
Length = 1016
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 704 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 763
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 764 PPDNILPLVICSG 776
>gi|332232619|ref|XP_003265501.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 2
[Nomascus leucogenys]
Length = 856
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|321463407|gb|EFX74423.1| hypothetical protein DAPPUDRAFT_324413 [Daphnia pulex]
Length = 760
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 74 KDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+DR P L+F CL+S + + ++V++TSGTL+P+D +
Sbjct: 422 EDRAPTVSNPILYFSCLDSSIAIKPVFNRFQTVVITSGTLSPLDMY 467
>gi|303389494|ref|XP_003072979.1| Rad3/XPD DNA repair helicase [Encephalitozoon intestinalis ATCC
50506]
gi|303302123|gb|ADM11619.1| Rad3/XPD DNA repair helicase [Encephalitozoon intestinalis ATCC
50506]
Length = 743
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 76 RTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+ P TL CL+S + S + R+VI+TSGT++P+D +
Sbjct: 402 QAPTVFNPTLRLACLDSSIAMSSVFRRFRNVIITSGTMSPIDMY 445
>gi|347365666|gb|AEO89688.1| ercc2 [Danio rerio]
Length = 760
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 74 KDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+D+TP LHF C++ + + ++VI+TSGTL+P+D +
Sbjct: 422 EDKTPTIANPVLHFSCMDPSIAIKPVFGRFQTVIITSGTLSPLDIY 467
>gi|332232623|ref|XP_003265503.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 4
[Nomascus leucogenys]
Length = 880
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 568 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 627
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 628 PPDNILPLVICSG 640
>gi|146415208|ref|XP_001483574.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 843
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK 130
LHF CL++ + + + SVI+TSGT++P+D + L Q I+
Sbjct: 496 LHFTCLDASIAMKPVFDRFSSVIITSGTISPLDMYPRMLNFQTVIQ 541
>gi|100913204|ref|NP_004390.3| probable ATP-dependent RNA helicase DDX11 isoform 2 [Homo sapiens]
Length = 856
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|332839865|ref|XP_520821.3| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 4 [Pan
troglodytes]
Length = 880
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 568 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 627
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 628 PPDNILPLVICSG 640
>gi|75858956|ref|XP_868818.1| hypothetical protein AN9436.2 [Aspergillus nidulans FGSC A4]
gi|40747660|gb|EAA66816.1| hypothetical protein AN9436.2 [Aspergillus nidulans FGSC A4]
Length = 797
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SV++TSGTL+P++ + LG
Sbjct: 437 VLHFTCLDAAIAIKPVFDRFSSVVITSGTLSPLEMYPKMLG 477
>gi|332839863|ref|XP_003313866.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 2 [Pan
troglodytes]
Length = 856
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|332232617|ref|XP_003265500.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 1
[Nomascus leucogenys]
Length = 906
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|100913202|ref|NP_085911.2| probable ATP-dependent RNA helicase DDX11 isoform 1 [Homo sapiens]
Length = 906
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|380420358|ref|NP_001244074.1| probable ATP-dependent RNA helicase DDX11 isoform 4 [Homo sapiens]
gi|29476793|gb|AAH50069.1| DDX11 protein [Homo sapiens]
Length = 880
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 568 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 627
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 628 PPDNILPLVICSG 640
>gi|5044|emb|CAA45870.1| rhp3+ [Schizosaccharomyces pombe]
Length = 772
Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
L F CL++ + + E RSVI+TSGTL+P+D + L
Sbjct: 432 LRFSCLDASIAIKPVFERFRSVIITSGTLSPLDMYPKML 470
>gi|190347854|gb|EDK40205.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 843
Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK 130
LHF CL++ + + + SVI+TSGT++P+D + L Q I+
Sbjct: 496 LHFTCLDASIAMKPVFDRFSSVIITSGTISPLDMYPRMLNFQTVIQ 541
>gi|5022|emb|CAA43022.1| rad15 [Schizosaccharomyces pombe]
Length = 772
Score = 38.9 bits (89), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
L F CL++ + + E RSVI+TSGTL+P+D + L
Sbjct: 432 LRFSCLDASIAIKPVFERFRSVIITSGTLSPLDMYPKML 470
>gi|1517816|gb|AAB06962.1| helicase [Homo sapiens]
Length = 906
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|358399042|gb|EHK48385.1| hypothetical protein TRIATDRAFT_214371 [Trichoderma atroviride IMI
206040]
Length = 769
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
TLHF CL++ + + E SVI+TSGT++P++ +
Sbjct: 407 TLHFTCLDAAIAIRPVFERFYSVIITSGTISPLEMY 442
>gi|169612700|ref|XP_001799767.1| hypothetical protein SNOG_09475 [Phaeosphaeria nodorum SN15]
gi|160702563|gb|EAT82740.2| hypothetical protein SNOG_09475 [Phaeosphaeria nodorum SN15]
Length = 724
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LHF CL++ + + E SVI+TSGT++P+D +
Sbjct: 357 LHFTCLDAAIAIKPVFERFYSVIVTSGTMSPLDMY 391
>gi|1666893|gb|AAB18749.1| CHL1 potential helicase [Homo sapiens]
Length = 906
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|19113937|ref|NP_593025.1| transcription factor TFIIH complex subunit Rad15
[Schizosaccharomyces pombe 972h-]
gi|1709995|sp|P26659.2|RAD15_SCHPO RecName: Full=DNA repair helicase rad15; AltName: Full=Protein
rhp3; AltName: Full=RAD3 homolog
gi|1177345|emb|CAA93221.1| transcription factor TFIIH complex subunit Rad15
[Schizosaccharomyces pombe]
Length = 772
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
L F CL++ + + E RSVI+TSGTL+P+D + L
Sbjct: 432 LRFSCLDASIAIKPVFERFRSVIITSGTLSPLDMYPKML 470
>gi|448112560|ref|XP_004202128.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
gi|359465117|emb|CCE88822.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
Length = 795
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK 130
LHF CL++ + + + SVI+TSGT++P+D + L Q I+
Sbjct: 443 LHFTCLDASIAIKPVFDRFSSVIITSGTISPLDMYPRMLNFQTVIQ 488
>gi|332839861|ref|XP_003313865.1| PREDICTED: probable ATP-dependent RNA helicase DDX11 isoform 1 [Pan
troglodytes]
gi|410258634|gb|JAA17284.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
gi|410301530|gb|JAA29365.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Pan troglodytes]
Length = 906
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICSG 666
>gi|448115115|ref|XP_004202752.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
gi|359383620|emb|CCE79536.1| Piso0_001608 [Millerozyma farinosa CBS 7064]
Length = 795
Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK 130
LHF CL++ + + + SVI+TSGT++P+D + L Q I+
Sbjct: 443 LHFTCLDASIAIKPVFDRFSSVIITSGTISPLDMYPRMLNFQTVIQ 488
>gi|358380117|gb|EHK17796.1| hypothetical protein TRIVIDRAFT_214193 [Trichoderma virens Gv29-8]
Length = 763
Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
TLHF CL++ + + E SVI+TSGT++P++ +
Sbjct: 403 TLHFTCLDAAIAIRPVFERFYSVIITSGTISPLEMY 438
>gi|346326897|gb|EGX96493.1| DNA helicase, putative [Cordyceps militaris CM01]
Length = 774
Score = 38.9 bits (89), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI-------KLEANHVI 137
L + L+ FS I SAR+VIL GT++P D ++ L FP+ L HVI
Sbjct: 448 LSYLLLSPTYAFSSIASSARAVILAGGTMSPFDDYKDHL---FPMLDESKITTLSCGHVI 504
Query: 138 DKDQVFIGVLG 148
+ + L
Sbjct: 505 PSTNLCVRTLA 515
>gi|157871788|ref|XP_001684443.1| helicase-like protein [Leishmania major strain Friedlin]
gi|68127512|emb|CAJ05491.1| helicase-like protein [Leishmania major strain Friedlin]
Length = 1127
Score = 38.9 bits (89), Expect = 0.91, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI--KLEANHVIDK 139
++T+ CL+ L FS + ++ V+L SGTL+P +LG + + +E HV+
Sbjct: 644 QWTIGLQCLDGSLAFSHLLKTVHRVVLASGTLSPFPQLARDLGVEASLWRTVEGLHVVPP 703
Query: 140 DQ 141
Q
Sbjct: 704 TQ 705
>gi|340514003|gb|EGR44274.1| DNA excision repair helicase [Trichoderma reesei QM6a]
Length = 783
Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
TLHF CL++ + + E SVI+TSGT++P++ +
Sbjct: 421 TLHFTCLDAAIAIRPVFERFYSVIITSGTISPLEMY 456
>gi|396466748|ref|XP_003837763.1| similar to ATP-dependent RNA helicase chl1 [Leptosphaeria maculans
JN3]
gi|312214326|emb|CBX94319.1| similar to ATP-dependent RNA helicase chl1 [Leptosphaeria maculans
JN3]
Length = 861
Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 8/84 (9%)
Query: 71 WYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP-- 128
W +++ T +++Y L L+ F DI E AR+V+L GT++P+ +++ L
Sbjct: 530 WSKEESTGTTLRYML----LDPTYHFRDIIEEARAVVLAGGTMSPMSDYENHLLPYLDHS 585
Query: 129 --IKLEANHVIDKDQVFIGVLGQG 150
+ L HVI +F + Q
Sbjct: 586 QIMTLSCGHVIPPSNLFAAPVIQA 609
>gi|259488995|tpe|CBF88902.1| TPA: 5' to 3' DNA helicase (Eurofung) [Aspergillus nidulans FGSC
A4]
Length = 791
Score = 38.9 bits (89), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SV++TSGTL+P++ + LG
Sbjct: 431 VLHFTCLDAAIAIKPVFDRFSSVVITSGTLSPLEMYPKMLG 471
>gi|395743927|ref|XP_002822926.2| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11, partial
[Pongo abelii]
Length = 636
Score = 38.9 bits (89), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 324 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 383
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 384 PPDNILPLVICSG 396
>gi|393219208|gb|EJD04695.1| glycoside hydrolase family 16 protein [Fomitiporia mediterranea
MF3/22]
Length = 319
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
Query: 56 SQGPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAP 115
S GP D G WY +RT I ++FW N G V SD+R A S I T P
Sbjct: 193 SYGPPFDSNGGG---WYAMERTSSHIN--VYFWPRNDGSVPSDVRNGA-STINTGNWGTP 246
Query: 116 VDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVF 154
V +F S G N++I + F G V+
Sbjct: 247 VANFPSSNGCNINSAFAPNNII-INLTFCGDWAGASSVY 284
>gi|310798566|gb|EFQ33459.1| DNA repair helicase [Glomerella graminicola M1.001]
Length = 791
Score = 38.9 bits (89), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGT++P++ + LG
Sbjct: 431 VLHFTCLDAAIAIKPVFDRFSSVIITSGTMSPLEMYPKMLG 471
>gi|410046333|ref|XP_003952169.1| PREDICTED: LOW QUALITY PROTEIN: putative ATP-dependent RNA helicase
DDX12-like [Pan troglodytes]
Length = 920
Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 583 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 642
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 643 PPDNILPLVICSG 655
>gi|392575737|gb|EIW68869.1| hypothetical protein TREMEDRAFT_30972 [Tremella mesenterica DSM
1558]
Length = 796
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEAN 134
H CL+ L + + E SV++TSGT++P+D FQ L +P+ L N
Sbjct: 433 FHMTCLDPSLAIAPVFERFSSVVITSGTISPLDMYPKILQFQPTLIQSYPMTLTRN 488
>gi|256091354|ref|XP_002581564.1| brca1 interacting protein C-terminal helicase 1 brip1
[Schistosoma mansoni]
Length = 150
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETEGESNRWYRKDRTPMRGIEPVVSQGP 59
M+ILSSRKHTCIN E+ + N+ D C L + + RK R ++ + GP
Sbjct: 1 MSILSSRKHTCINPEI-SSTPNVTDSCHNLLLSGVCAYDLPRKKSDLSRAVDKLDRSGP 58
>gi|325186971|emb|CCA21515.1| predicted protein putative [Albugo laibachii Nc14]
Length = 801
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LH CL++ L + E SVI+TSGTL+P+D +
Sbjct: 457 VLHLACLDASLAIRPVLERFSSVIITSGTLSPIDLY 492
>gi|395836775|ref|XP_003791325.1| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Otolemur garnettii]
Length = 880
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
+L F LN + F+ + + R++++ GTL PV F+ +L + ++ HVI
Sbjct: 567 SLKFLLLNPAVHFAQVVKECRAMVIAGGTLQPVSDFREQLLACAGVEAERVVEFSCGHVI 626
Query: 138 DKDQVFIGVLGQG 150
D + VL G
Sbjct: 627 PPDNILPIVLSTG 639
>gi|452840275|gb|EME42213.1| hypothetical protein DOTSEDRAFT_81172 [Dothistroma septosporum
NZE10]
Length = 836
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 8/69 (11%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI-----KLEANHVID 138
L + L+ F +I E ARSVIL GT++P+D ++ +L FP +H+I
Sbjct: 532 ALQYLLLDPSEHFREIVEDARSVILAGGTMSPMDDYRQQL---FPYLHSIQTFSCDHLIP 588
Query: 139 KDQVFIGVL 147
+F+ +
Sbjct: 589 PSSLFVRAI 597
>gi|378732396|gb|EHY58855.1| DNA repair helicase rad15 [Exophiala dermatitidis NIH/UT8656]
Length = 819
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 6/53 (11%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKL 131
LHF CL++ + + E SVI+TSGT++P++ +F + L +P+ L
Sbjct: 432 LHFACLDASIAIKPVFERFSSVIITSGTISPLEMYPKMLNFSTVLQESYPMSL 484
>gi|452840050|gb|EME41988.1| hypothetical protein DOTSEDRAFT_72929 [Dothistroma septosporum
NZE10]
Length = 798
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGT++P++ + LG
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLG 471
>gi|1666897|gb|AAB18751.1| CHL1 protein, partial [Homo sapiens]
Length = 556
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 319 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 378
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 379 PPDNILPLVICSG 391
>gi|70921532|ref|XP_734078.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56506478|emb|CAH82946.1| hypothetical protein PC300239.00.0 [Plasmodium chabaudi chabaudi]
Length = 209
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEANHV 136
+ F CL+S + + +SV+LTSGT+ P++ +F + L FP+ + N V
Sbjct: 11 VIQFACLDSSIAMKSVLNRYKSVVLTSGTITPLELYPKLLNFSTVLTASFPMSFDRNCV 69
>gi|67525973|ref|XP_661048.1| hypothetical protein AN3444.2 [Aspergillus nidulans FGSC A4]
gi|40743798|gb|EAA62984.1| hypothetical protein AN3444.2 [Aspergillus nidulans FGSC A4]
Length = 994
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 76 RTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI----KL 131
+TP I+ LH+ L+ F +I E AR+VIL GT++P+ + + L + P
Sbjct: 511 KTPGDIQ--LHYMLLDPTNHFREIVEDARAVILAGGTMSPMSDYLNHLFSYVPKDRLNTF 568
Query: 132 EANHVIDKDQVFIGVLGQG 150
HVI + + L +G
Sbjct: 569 SYGHVIPSENLTAHTLARG 587
>gi|452981603|gb|EME81363.1| hypothetical protein MYCFIDRAFT_189512 [Pseudocercospora fijiensis
CIRAD86]
Length = 776
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGT++P++ + LG
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLG 471
>gi|440796100|gb|ELR17209.1| Nucleotide excision repair protein, putative [Acanthamoeba
castellanii str. Neff]
Length = 696
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L + CL++ + I RSV++TSGTL+P+D + L + +++DQ I
Sbjct: 404 LQYTCLDASIAMQPIIRRFRSVVITSGTLSPLDMYPRMLNFMPVVTERLGMSLNRDQEVI 463
Query: 145 GVLGQGQK 152
+G++
Sbjct: 464 STKFEGRR 471
>gi|307186827|gb|EFN72247.1| Probable ATP-dependent RNA helicase DDX12 [Camponotus floridanus]
Length = 861
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL---GTQFP---IKLEANHVID 138
+ F LN F DI ARSV+L GT+ P+ F +L P + +HVI
Sbjct: 559 IKFLLLNPATHFHDIVRDARSVVLAGGTMEPMSEFIDQLFLMAGAMPDRIMTFSCDHVIP 618
Query: 139 KDQVFIGVLGQG 150
K+ + V+ +G
Sbjct: 619 KENIISNVVIRG 630
>gi|380492131|emb|CCF34825.1| DNA repair helicase rad15 [Colletotrichum higginsianum]
Length = 775
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGT++P++ + LG
Sbjct: 415 LHFTCLDAAIAIKPVFDRFSSVIITSGTMSPLEMYPKMLG 454
>gi|320583366|gb|EFW97581.1| DNA repair helicase RAD3 [Ogataea parapolymorpha DL-1]
Length = 1061
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L F CL++ + I E SVI+TSGT++P+D + L + ++ +D+
Sbjct: 731 LRFACLDASIAMKPIFERFSSVIITSGTISPLDMYPRMLNFETVVQESYTMTLDRRSFLP 790
Query: 145 GVLGQG 150
V+ +G
Sbjct: 791 MVVTKG 796
>gi|346976950|gb|EGY20402.1| DNA repair helicase RAD3 [Verticillium dahliae VdLs.17]
Length = 772
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGT++P++ + LG
Sbjct: 414 LHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLG 453
>gi|406859189|gb|EKD12258.1| tfiih complex helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 786
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGT++P++ + LG
Sbjct: 405 LHFACLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLG 444
>gi|310791719|gb|EFQ27246.1| DNA repair helicase [Glomerella graminicola M1.001]
Length = 897
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDKD 140
L + L+ FS I SAR+VIL GT++P + ++S L P L HVI
Sbjct: 545 LSYLLLSPTHAFSSIATSARAVILAGGTMSPFNDYKSHLFPYLPESKLTTLSCGHVIPPS 604
Query: 141 QVFIGVLG 148
+ + L
Sbjct: 605 NLCVWTLA 612
>gi|330930952|ref|XP_003303208.1| hypothetical protein PTT_15338 [Pyrenophora teres f. teres 0-1]
gi|311320914|gb|EFQ88691.1| hypothetical protein PTT_15338 [Pyrenophora teres f. teres 0-1]
Length = 865
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 71 WYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP-- 128
+ R++ T M+++Y L L+ F +I E AR+VIL GT++P+ ++ L +
Sbjct: 534 YSREEDTGMTLRYML----LDPTFHFKEIVEEARAVILAGGTMSPMSDYEQHLLSYLEPS 589
Query: 129 --IKLEANHVI 137
+ L HVI
Sbjct: 590 KIMTLSCGHVI 600
>gi|78190825|gb|ABB29734.1| RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH [Monosiga brevicollis]
Length = 207
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DR P L F C+++ L + + +SVI+TSGTL+P+D +
Sbjct: 6 DRAPSVPDPVLRFTCMDASLAVKPVFDRFQSVIITSGTLSPLDMY 50
>gi|410076214|ref|XP_003955689.1| hypothetical protein KAFR_0B02570 [Kazachstania africana CBS 2517]
gi|372462272|emb|CCF56554.1| hypothetical protein KAFR_0B02570 [Kazachstania africana CBS 2517]
Length = 779
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 35/66 (53%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
+ F CL++ + + E SVI+TSGT++P+D + L + ++ + +DK
Sbjct: 436 MRFSCLDASIAIKPVFEKFSSVIITSGTISPLDMYPRMLNFETILQKSYSMTLDKKSFLP 495
Query: 145 GVLGQG 150
++ +G
Sbjct: 496 MIITKG 501
>gi|398396458|ref|XP_003851687.1| DNA repair helicase [Zymoseptoria tritici IPO323]
gi|339471567|gb|EGP86663.1| hypothetical protein MYCGRDRAFT_43883 [Zymoseptoria tritici IPO323]
Length = 801
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGT++P++ + LG
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLG 471
>gi|449299736|gb|EMC95749.1| hypothetical protein BAUCODRAFT_502978 [Baudoinia compniacensis
UAMH 10762]
Length = 803
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGT++P++ + LG
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLG 471
>gi|302418904|ref|XP_003007283.1| DNA repair helicase RAD3 [Verticillium albo-atrum VaMs.102]
gi|261354885|gb|EEY17313.1| DNA repair helicase RAD3 [Verticillium albo-atrum VaMs.102]
Length = 756
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGT++P++ + LG
Sbjct: 398 LHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLG 437
>gi|145355132|ref|XP_001421822.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582061|gb|ABP00116.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 849
Score = 38.5 bits (88), Expect = 1.2, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 77 TPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP 128
TP TL F L++ F + E ARSVIL GTLAP+ ++L FP
Sbjct: 518 TPEGDPATLRFVLLDAASRFKRVVEQARSVILVGGTLAPIPELVAQL---FP 566
>gi|399216534|emb|CCF73221.1| unnamed protein product [Babesia microti strain RI]
Length = 790
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLE 132
LH CL++ L + + +SVILTSGT++P++ F L FP+ L+
Sbjct: 468 LHLSCLDASLAIKHVFNTFKSVILTSGTISPLEFYPKILDFTPVLTESFPMSLD 521
>gi|340059127|emb|CCC53502.1| putative helicase-like protein [Trypanosoma vivax Y486]
Length = 984
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 68 SNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGT-- 125
S R ++R + + T+ CL+ + F + S V+L SGTLAP ELG
Sbjct: 551 SGRHEERERVDAA-RVTIAVQCLDGSVAFRYLLASVHRVVLASGTLAPFRQLGQELGVPP 609
Query: 126 QFPIKLEANHVIDKDQV-FIGVLGQG 150
+ E HV+ K Q F+ + G
Sbjct: 610 TSMVTYEGGHVVGKHQYRFVALTRTG 635
>gi|259485564|tpe|CBF82692.1| TPA: DNA helicase, putative (AFU_orthologue; AFUA_3G05590)
[Aspergillus nidulans FGSC A4]
Length = 841
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Query: 76 RTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI----KL 131
+TP I+ LH+ L+ F +I E AR+VIL GT++P+ + + L + P
Sbjct: 511 KTPGDIQ--LHYMLLDPTNHFREIVEDARAVILAGGTMSPMSDYLNHLFSYVPKDRLNTF 568
Query: 132 EANHVIDKDQVFIGVLGQG 150
HVI + + L +G
Sbjct: 569 SYGHVIPSENLTAHTLARG 587
>gi|2632247|emb|CAA67895.1| CHL1 protein [Homo sapiens]
Length = 680
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLE------ANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L ++ E HVI
Sbjct: 418 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERGGGVFCGHVI 477
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 478 PPDNILPLVICSG 490
>gi|340506361|gb|EGR32513.1| tfiih basal transcription factor complex helicase subunit, putative
[Ichthyophthirius multifiliis]
Length = 809
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
L F CL+S L ++ + SVILTSGT++P+D +
Sbjct: 434 LTFTCLDSSLAIQNVFKEYASVILTSGTMSPLDIY 468
>gi|322801298|gb|EFZ21985.1| hypothetical protein SINV_11349 [Solenopsis invicta]
Length = 908
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVID 138
+ F LN F DI ARSV+L GT+ P+ F +L + + +HVI
Sbjct: 606 IKFLLLNPAAHFHDIVRDARSVVLAGGTMEPMSEFIDQLFLMAGATSDRIMTFSCDHVIP 665
Query: 139 KDQVFIGVLGQG 150
K+ + V+ +G
Sbjct: 666 KENIISNVVMRG 677
>gi|402223166|gb|EJU03231.1| hypothetical protein DACRYDRAFT_106396 [Dacryopinax sp. DJM-731
SS1]
Length = 222
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLE-------ANHV 136
TL + LN F ++ + AR+V+L GT+ P+ F+++L FP LE HV
Sbjct: 99 TLCYQLLNPSPSFQEVVDEARAVVLAGGTMEPISDFRTQL---FPRLLENRFATFSCGHV 155
Query: 137 IDKDQVFIGVLGQGQK 152
+ K+ + + +G K
Sbjct: 156 VAKENLTALAVSRGPK 171
>gi|348564458|ref|XP_003468022.1| PREDICTED: probable ATP-dependent RNA helicase DDX11-like [Cavia
porcellus]
Length = 424
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL----GTQFP--IKLEANHVI 137
+L F LN + F+ + E R+V++ GT+ PV F+ +L GTQ ++ VI
Sbjct: 116 SLKFLLLNPAVQFAQVMEECRAVVIVGGTMQPVSDFREQLLTWAGTQSERVVEFSCGRVI 175
Query: 138 DKDQVFIGVL 147
D + VL
Sbjct: 176 PPDNILPLVL 185
>gi|149712588|ref|XP_001490646.1| PREDICTED: DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 [Equus
caballus]
Length = 906
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
+L F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 SLKFLLLNPAVPFAQVVKECRAVVIAGGTMQPVSDFREQLLACAGVDAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVVCSG 666
>gi|448110971|ref|XP_004201733.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
gi|359464722|emb|CCE88427.1| Piso0_001932 [Millerozyma farinosa CBS 7064]
Length = 824
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI----KLEANHVI 137
K + + L+ +F DI R +IL GT+ P D F+ L P K +H+I
Sbjct: 511 KTAIDYLLLDPSEIFRDIVSKCRCLILCGGTMEPTDDFKKYLFPYVPSQSIKKFSCDHII 570
Query: 138 -DKDQVFIGVLGQGQKVF 154
DK+ + + G VF
Sbjct: 571 PDKNLIVFPIGKYGNSVF 588
>gi|342186023|emb|CCC95508.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 973
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Query: 68 SNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQF 127
S+RW RK ++ CL+ L F + A V+L SGTLAP +LG
Sbjct: 567 SSRWARK---------SIGIRCLDGSLTFHHLLGVAHRVVLASGTLAPFQQLGQDLGIPL 617
Query: 128 P--IKLEANHVIDKDQVFIGVL 147
+ E HV+ + Q + VL
Sbjct: 618 GSMVTYEGLHVVREFQYRLRVL 639
>gi|282848158|ref|NP_001164296.1| DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11 [Xenopus (Silurana)
tropicalis]
gi|197246717|gb|AAI68601.1| Unknown (protein for MGC:185780) [Xenopus (Silurana) tropicalis]
Length = 895
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSE------LGTQFPIKLEANHVI 137
+L F LN + F+++ + RSVI+ GT+ PV F+ + L + + HVI
Sbjct: 580 SLKFLMLNPAVHFAEVLKECRSVIIAGGTMQPVSDFKQQLLISAGLSPERITEFSCGHVI 639
Query: 138 DKDQVFIGVLGQG 150
+ + VL G
Sbjct: 640 PAENILPIVLCSG 652
>gi|18026950|gb|AAL55708.1| RAD3-like DNA helicase [Plasmodium falciparum]
Length = 1056
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEANHV 136
+ F CL+S + + +S+ILTSGT+ P++ +F++ L FP+ + N V
Sbjct: 728 IQFACLDSSIAMKTVINKYKSIILTSGTITPLELYPKLLNFKTVLTASFPMSFDRNCV 785
>gi|124507219|ref|XP_001352206.1| DNA excision-repair helicase, putative [Plasmodium falciparum 3D7]
gi|23505236|emb|CAD52016.1| DNA excision-repair helicase, putative [Plasmodium falciparum 3D7]
Length = 1056
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEANHV 136
+ F CL+S + + +S+ILTSGT+ P++ +F++ L FP+ + N V
Sbjct: 728 IQFACLDSSIAMKTVINKYKSIILTSGTITPLELYPKLLNFKTVLTASFPMSFDRNCV 785
>gi|388583056|gb|EIM23359.1| DNA repair helicase [Wallemia sebi CBS 633.66]
Length = 831
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI----KLEANHVIDKD 140
L + LN F I + ARS+IL GT+ PV F++ L P L HVI
Sbjct: 529 LSYQLLNGAEHFKSIVDDARSIILAGGTMHPVSDFKTFLMPSLPASRFNSLSCEHVIPPT 588
Query: 141 QVFIGVLGQG 150
+ + +G
Sbjct: 589 NLLATAITKG 598
>gi|254569252|ref|XP_002491736.1| 5' to 3' DNA helicase, involved in nucleotide excision repair and
transcription [Komagataella pastoris GS115]
gi|238031533|emb|CAY69456.1| 5' to 3' DNA helicase, involved in nucleotide excision repair and
transcription [Komagataella pastoris GS115]
gi|328351762|emb|CCA38161.1| DNA excision repair protein ERCC-2 [Komagataella pastoris CBS 7435]
Length = 773
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
LHF CL++ + I + SVI+TSGT++P+D + L
Sbjct: 433 LHFTCLDASIAIKPIFDRFSSVIITSGTISPLDMYPKML 471
>gi|297261772|ref|XP_001114510.2| PREDICTED: putative ATP-dependent RNA helicase DDX11-like
protein-like isoform 4 [Macaca mulatta]
Length = 910
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 598 TLKFLLLNPAVHFGQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 657
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 658 PPDNILPLVICSG 670
>gi|396081490|gb|AFN83106.1| Rad3/XPD DNA repair helicase [Encephalitozoon romaleae SJ-2008]
Length = 743
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
TL CL+S + S + R+VI+TSGT++P+D +
Sbjct: 410 TLRLACLDSSIAMSSVFARFRNVIITSGTMSPIDMY 445
>gi|384500830|gb|EIE91321.1| hypothetical protein RO3G_16032 [Rhizopus delemar RA 99-880]
Length = 184
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 8/81 (9%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IK 130
D +SIKY L LN F I + A+S+IL GT+ PV F S L P +
Sbjct: 87 DSPGVSIKYML----LNPANAFKPIVDEAKSIILAGGTMEPVSDFFSHLFPTAPKERLVH 142
Query: 131 LEANHVIDKDQVFIGVLGQGQ 151
H+I + L +G
Sbjct: 143 FSCGHIIPSTNLLTLTLEKGS 163
>gi|340055622|emb|CCC49943.1| TFIIH basal transcription factor, private [Trypanosoma vivax Y486]
Length = 889
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 89 CLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
C+++ L D+ RSV+LTSGTL+P+D + LG
Sbjct: 525 CVDASLALRDVFSRHRSVVLTSGTLSPLDIYPKILG 560
>gi|392560811|gb|EIW53993.1| DNA repair helicase [Trametes versicolor FP-101664 SS1]
Length = 875
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI----KLEANHVIDKD 140
+ + LN F ++ +SAR+VIL GT++P+D +L + P H+I +
Sbjct: 554 IKYQHLNPATYFQEVIDSARAVILAGGTMSPIDDVVHQLFSALPADRLSTFSCGHIIPPE 613
Query: 141 QVFIGVLGQGQK 152
+ VL +G +
Sbjct: 614 NLQTLVLKKGPR 625
>gi|389744669|gb|EIM85851.1| DNA repair helicase [Stereum hirsutum FP-91666 SS1]
Length = 875
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVID 138
+++ + CLN F + +SA+S+IL GTL+P + ++L P + H+I
Sbjct: 571 FSITYQCLNPSPQFQALVDSAQSIILAGGTLSPTEDIITQLFYYLPSSRISQFSCLHIIP 630
Query: 139 KDQVFIGVLGQGQK 152
K + ++G G +
Sbjct: 631 KSNLQALIVGYGPR 644
>gi|308499723|ref|XP_003112047.1| CRE-RTEL-1 protein [Caenorhabditis remanei]
gi|308268528|gb|EFP12481.1| CRE-RTEL-1 protein [Caenorhabditis remanei]
Length = 535
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 104 RSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQ 151
R+V+L SGTL+P+ +F +G F LE H + + V ++ +G+
Sbjct: 10 RNVLLASGTLSPIQAFTYNMGLNFGAILENEHALKQVPVLTSIVTRGK 57
>gi|193606019|ref|XP_001943653.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit-like [Acyrthosiphon pisum]
Length = 756
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
+HF CL++ + I + +V++TSGTL+P+D + L P+ + + + Q F
Sbjct: 431 VMHFSCLDASIAIKPILDYFNTVLITSGTLSPLDMYPKILNIN-PVIMTSLTMTLSRQCF 489
Query: 144 I-GVLGQG 150
+ V+G+G
Sbjct: 490 LPMVVGRG 497
>gi|170087262|ref|XP_001874854.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650054|gb|EDR14295.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 759
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
HF CL+ L + E SV++TSGTL+P+D + L
Sbjct: 442 FHFTCLDPSLAIKPVFERFSSVVITSGTLSPLDMYPKML 480
>gi|72393255|ref|XP_847428.1| TFIIH basal transcription factor complex helicase subunit
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62175150|gb|AAX69298.1| TFIIH basal transcription factor complex helicase subunit, putative
[Trypanosoma brucei]
gi|70803458|gb|AAZ13362.1| TFIIH basal transcription factor complex helicase subunit, putative
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 819
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
+ C+++ L ++ RSVILTSGTL+P+D + LG
Sbjct: 451 IRLVCVDASLALREVFAKYRSVILTSGTLSPLDIYPKMLG 490
>gi|342182871|emb|CCC92351.1| putative DNA excision repair protein, Transcription factor II H
complex, XPD subunit [Trypanosoma congolense IL3000]
Length = 811
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 89 CLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
C+++ L ++ RSVILTSGTL+P+D + LG
Sbjct: 439 CVDASLALREVFSKYRSVILTSGTLSPLDIYPKMLG 474
>gi|70952870|ref|XP_745573.1| DNA excision-repair helicase [Plasmodium chabaudi chabaudi]
gi|56525940|emb|CAH78123.1| DNA excision-repair helicase, putative [Plasmodium chabaudi
chabaudi]
Length = 970
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEANHV 136
+ F CL+S + + +SV+LTSGT+ P++ +F + L FP+ + N V
Sbjct: 643 IQFACLDSSIAMKSVLNRYKSVVLTSGTITPLELYPKLLNFSTVLTASFPMSFDRNCV 700
>gi|261330675|emb|CBH13660.1| TFIIH basal transcription factor complex helicase subunit, putative
[Trypanosoma brucei gambiense DAL972]
Length = 819
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
+ C+++ L ++ RSVILTSGTL+P+D + LG
Sbjct: 451 IRLVCVDASLALREVFAKYRSVILTSGTLSPLDIYPKMLG 490
>gi|78190773|gb|ABB29708.1| RNA polymerase II transcription initiation/nucleotide excision
repair factor TFIIH [Aphrocallistes vastus]
Length = 413
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
D P + +H CL++ + I + +SVILTSGTL+P+D + L
Sbjct: 183 DLNPTAHNPVMHLSCLDASVASKSIFQRFQSVILTSGTLSPLDMYPKLLA 232
>gi|313241207|emb|CBY33490.1| unnamed protein product [Oikopleura dioica]
Length = 761
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK----LEANHVI 137
K + + LN +F++I + ARSV+L GT+ P + + +L + + HVI
Sbjct: 465 KAQMKVFLLNPASIFAEISKDARSVLLAGGTMKPYQTLKDQLFAEVSSEKLSWFNCEHVI 524
Query: 138 DKDQVFIGVLGQG 150
Q+ VL +G
Sbjct: 525 SDSQMNALVLQRG 537
>gi|123470658|ref|XP_001318533.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121901295|gb|EAY06310.1| hypothetical protein TVAG_065670 [Trichomonas vaginalis G3]
Length = 820
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 10/78 (12%)
Query: 96 FSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFI 155
F ++A S+I T+ L P+DS Q LG F + H DQ F
Sbjct: 380 FRSFTKTAHSIIFTANVLTPMDSLQRSLGVNFDLSFSGIHPFINDQNFAAF--------- 430
Query: 156 GVLGQGPQNIPLQALYKN 173
+ N+PL ++ +N
Sbjct: 431 -AVNFTNDNVPLSSISEN 447
>gi|430813060|emb|CCJ29560.1| unnamed protein product [Pneumocystis jirovecii]
Length = 774
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVI 137
HF CL++ + I +SVI+TSGT++P+D +P L+ N VI
Sbjct: 431 VFHFTCLDASIAIKPIFAKFKSVIITSGTISPLD--------MYPKILQFNAVI 476
>gi|401425034|ref|XP_003877002.1| helicase-like protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493246|emb|CBZ28531.1| helicase-like protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 1117
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI--KLEANHVIDK 139
++T+ CL+ L FS + ++ V+L SGTL+P +LG + + +E HV+
Sbjct: 637 RWTIDLRCLDGSLAFSHLLKTVHRVVLASGTLSPFPQLARDLGVEAFLWRTVEGLHVVPP 696
Query: 140 DQVFIGVL 147
Q + L
Sbjct: 697 TQYSLTAL 704
>gi|1517818|gb|AAB06963.1| helicase, partial [Homo sapiens]
Length = 734
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 446 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 505
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 506 PPDNILPLVICIG 518
>gi|393910719|gb|EJD76012.1| Ercc2 protein [Loa loa]
Length = 705
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 25/36 (69%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
TLH C+++ + I + R+V++TSGTL+P+D +
Sbjct: 390 TLHLSCMDASVAIRPIFQRYRTVVITSGTLSPLDMY 425
>gi|207340439|gb|EDZ68787.1| YPL008Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270082|gb|EEU05324.1| Chl1p [Saccharomyces cerevisiae JAY291]
gi|259150146|emb|CAY86949.1| Chl1p [Saccharomyces cerevisiae EC1118]
Length = 861
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVID 138
Y++ + L F I A+ V+L GT+ P+ F S L + P L NHVI
Sbjct: 556 YSIKYMLLEPSKPFESILNQAKCVVLAGGTMEPMSEFLSNLLPEVPSEDITTLSCNHVIP 615
Query: 139 KDQVFIGVLGQGQKVF 154
K+ + + Q + F
Sbjct: 616 KENLQTYITNQPELEF 631
>gi|190407937|gb|EDV11202.1| deah box protein [Saccharomyces cerevisiae RM11-1a]
Length = 861
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVID 138
Y++ + L F I A+ V+L GT+ P+ F S L + P L NHVI
Sbjct: 556 YSIKYMLLEPSKPFESILNQAKCVVLAGGTMEPMSEFLSNLLPEVPSEDITTLSCNHVIP 615
Query: 139 KDQVFIGVLGQGQKVF 154
K+ + + Q + F
Sbjct: 616 KENLQTYITNQPELEF 631
>gi|384496850|gb|EIE87341.1| hypothetical protein RO3G_12052 [Rhizopus delemar RA 99-880]
Length = 675
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 36/67 (53%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
LHF CL++ + + + +V++TSGTL+P+D + L + ++ + + ++
Sbjct: 405 VLHFTCLDASIAIKPVFDRFSTVVITSGTLSPLDMYPKMLNFEAVVQESYSMTLSRNCFL 464
Query: 144 IGVLGQG 150
V+ +G
Sbjct: 465 PMVITRG 471
>gi|6325249|ref|NP_015317.1| Chl1p [Saccharomyces cerevisiae S288c]
gi|116351|sp|P22516.1|CHL1_YEAST RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1; AltName: Full=Chromosome
transmission fidelity protein 1
gi|3538|emb|CAA39922.1| CHL1 [Saccharomyces cerevisiae]
gi|683782|emb|CAA88378.1| Chl1p [Saccharomyces cerevisiae]
gi|965085|gb|AAB68097.1| Chl1p: kinetochore protein in the DEAH box family [Saccharomyces
cerevisiae]
gi|1314068|emb|CAA95033.1| Chl1p [Saccharomyces cerevisiae]
gi|285815528|tpg|DAA11420.1| TPA: Chl1p [Saccharomyces cerevisiae S288c]
gi|392296003|gb|EIW07106.1| Chl1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 861
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVID 138
Y++ + L F I A+ V+L GT+ P+ F S L + P L NHVI
Sbjct: 556 YSIKYMLLEPSKPFESILNQAKCVVLAGGTMEPMSEFLSNLLPEVPSEDITTLSCNHVIP 615
Query: 139 KDQVFIGVLGQGQKVF 154
K+ + + Q + F
Sbjct: 616 KENLQTYITNQPELEF 631
>gi|393220578|gb|EJD06064.1| DNA repair helicase [Fomitiporia mediterranea MF3/22]
Length = 800
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
HF CL+ L + + E SV++TSGT++P+D + L
Sbjct: 439 FHFTCLDPSLAIAPVFERFSSVVITSGTISPLDMYPKML 477
>gi|84627555|gb|AAI11734.1| DDX11 protein [Homo sapiens]
Length = 906
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 654 PPDNILPLVICIG 666
>gi|350584454|ref|XP_003126634.3| PREDICTED: putative ATP-dependent RNA helicase DDX11-like protein
8-like [Sus scrofa]
Length = 693
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
+L F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 381 SLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFREQLLACAGVEAERVVEFSCGHVI 440
Query: 138 DKDQVFIGVLGQG 150
D + V+ G
Sbjct: 441 PPDNILPLVICSG 453
>gi|168039045|ref|XP_001772009.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676610|gb|EDQ63090.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 750
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEAN 134
+R P L CL+S L + E +SV++TSGTL+P+D + L I
Sbjct: 422 ERMPNIPDPVLQLSCLDSSLAIKPVFEKFQSVVITSGTLSPIDLYPRLLNFHPVISNSYK 481
Query: 135 HVIDKDQVFIGVLGQG 150
+ +D + VL +G
Sbjct: 482 MTLTRDCLCPMVLTRG 497
>gi|402224656|gb|EJU04718.1| DNA repair helicase [Dacryopinax sp. DJM-731 SS1]
Length = 798
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 6/56 (10%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEAN 134
HF CL+ L I E SV++TSGT++P+D F + +P+ L N
Sbjct: 440 FHFTCLDPSLAIKPIFERFSSVVITSGTISPLDMYPKMLQFTPVIQESYPMTLTRN 495
>gi|350644408|emb|CCD60850.1| DNA repair helicase rad3/xp-d, putative [Schistosoma mansoni]
Length = 698
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
+R P I L+F C+++ L I SVI+TSGTL+P++ +
Sbjct: 400 ERKPTIINPVLYFHCMDASLPIRPIMSRFTSVIITSGTLSPLEMY 444
>gi|82597077|ref|XP_726529.1| RAD3-like DNA helicase [Plasmodium yoelii yoelii 17XNL]
gi|23481970|gb|EAA18094.1| RAD3-like DNA helicase-related [Plasmodium yoelii yoelii]
Length = 1032
Score = 37.7 bits (86), Expect = 1.9, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEANHV 136
+ F CL+S + + +S+ILTSGT+ P++ +F + L FP+ + N V
Sbjct: 704 IQFACLDSSIAMKSVLNRYKSIILTSGTITPLELYPKLLNFSTVLTASFPMSFDRNCV 761
>gi|406865719|gb|EKD18760.1| putative ATP-dependent RNA helicase chl1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 894
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDKD 140
L F L+ F I AR+VIL GT++P+ + S L P L HVI K+
Sbjct: 555 LKFLLLDPAPHFQAIVSEARAVILAGGTMSPMSDYTSHLFPYLPPAGITTLSCGHVIPKE 614
Query: 141 QVFIGVLGQG 150
+ L +G
Sbjct: 615 NLLAWNLSRG 624
>gi|351714844|gb|EHB17763.1| Integrator complex subunit 2 [Heterocephalus glaber]
Length = 1718
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETEGESN--RWYRKDR 45
MTILSSR HTC++ EV+ N N+ C EL + + S +YRK+R
Sbjct: 1650 MTILSSRDHTCVHPEVV-GNFNRNEKCMELLDGKNVSKIILFYRKNR 1695
>gi|341038606|gb|EGS23598.1| hypothetical protein CTHT_0002930 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 780
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 25/35 (71%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LHF CL++ + + + R+VI+TSGT++P++ +
Sbjct: 415 LHFCCLDAAIAIKPVFDKFRNVIITSGTISPLEMY 449
>gi|425778625|gb|EKV16743.1| hypothetical protein PDIG_19320 [Penicillium digitatum PHI26]
gi|425784169|gb|EKV21962.1| hypothetical protein PDIP_01290 [Penicillium digitatum Pd1]
Length = 974
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 67 ESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQ 126
E +++K + + +KY L L+ F +I E AR+VIL GT++P+ + + L +
Sbjct: 514 EGRLFFQKSQEDVLLKYML----LDPTNHFREIAEDARAVILAGGTMSPMSDYVNYLFSY 569
Query: 127 FPIK----LEANHVIDKDQVFIGVLGQG 150
P + HVI K + L QG
Sbjct: 570 LPPERLGTFSYGHVIPKSNLVAQSLTQG 597
>gi|440895926|gb|ELR47985.1| Putative ATP-dependent RNA helicase DDX11, partial [Bos grunniens
mutus]
Length = 924
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
+L F LN + F+ + + +R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 589 SLKFLLLNPAVHFAQVVKESRAVVIAGGTMQPVSDFREQLLAGAGVEAERVVEFSCGHVI 648
Query: 138 DKDQVFIGVLGQG 150
D + ++ G
Sbjct: 649 PPDHILPLIICSG 661
>gi|407928326|gb|EKG21185.1| Xeroderma pigmentosum group D protein [Macrophomina phaseolina MS6]
Length = 788
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
HF CL++ + + E SVI+TSGT++P+D + L
Sbjct: 432 FHFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPKML 470
>gi|342878343|gb|EGU79689.1| hypothetical protein FOXB_09802 [Fusarium oxysporum Fo5176]
Length = 864
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP-------IKLEANHVI 137
L + L+ FS I SAR+V+L GT++P D ++ L FP L HVI
Sbjct: 535 LSYLLLSPTYAFSSIASSARAVVLAGGTMSPFDDYKDHL---FPSLEPEKITTLSCGHVI 591
Query: 138 DKDQVFIGVLGQGQ 151
+ + + L +
Sbjct: 592 PPENLCVWTLASSR 605
>gi|241957053|ref|XP_002421246.1| 5' to 3' DNA helicase, putative; DNA repair helicase Rad3
homologue, putative; transcription initiation factor
TFIIH subunit, putative [Candida dubliniensis CD36]
gi|223644590|emb|CAX40578.1| 5' to 3' DNA helicase, putative [Candida dubliniensis CD36]
Length = 781
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LHF CL++ + + + SVI+TSGT++P+D +
Sbjct: 443 LHFTCLDASIAIKPVFDRFSSVIITSGTISPLDMY 477
>gi|389601910|ref|XP_001566207.2| helicase-like protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|322505237|emb|CAM39707.2| helicase-like protein [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 1112
Score = 37.7 bits (86), Expect = 2.0, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI--KLEANHVIDKDQ 141
T+ CL+ L FS + ++ V+L SGTL+P +LG + + +E HV+ Q
Sbjct: 634 TIDLRCLDGSLAFSHLLQTVHRVVLASGTLSPFTQLARDLGVEASLWRVVEGLHVVPSTQ 693
Query: 142 VFIGVL 147
+ L
Sbjct: 694 YSLTAL 699
>gi|313233484|emb|CBY09656.1| unnamed protein product [Oikopleura dioica]
Length = 675
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK----LEANHVI 137
K + + LN +F++I + ARSV+L GT+ P + + +L + + HVI
Sbjct: 379 KAQMKVFLLNPASIFAEISKDARSVLLAGGTMKPYQTLKDQLFAEVSSEKLSWFNCEHVI 438
Query: 138 DKDQVFIGVLGQG 150
Q+ VL +G
Sbjct: 439 SDSQMNALVLQRG 451
>gi|296804606|ref|XP_002843155.1| DEAD_2 domain-containing protein [Arthroderma otae CBS 113480]
gi|238845757|gb|EEQ35419.1| DEAD_2 domain-containing protein [Arthroderma otae CBS 113480]
Length = 854
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 67 ESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQ 126
E +Y K + +KY L L+ F ++ E AR+VIL GT+ P+D + L +
Sbjct: 522 EGRLFYEKASGDVQMKYLL----LDPTSRFRELVEDARAVILAGGTMEPMDDYVDHLLSY 577
Query: 127 FPIK----LEANHVIDKDQVFIGVLGQG 150
P + HVI KD + + +G
Sbjct: 578 VPREKVKTFTYGHVIPKDNLIAIPVARG 605
>gi|167384070|ref|XP_001736798.1| regulator of telomere elongation helicase 1 rtel1 [Entamoeba dispar
SAW760]
gi|165900684|gb|EDR26949.1| regulator of telomere elongation helicase 1 rtel1, putative
[Entamoeba dispar SAW760]
Length = 1030
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 13/82 (15%)
Query: 87 FWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI-----------KLEANH 135
F CL+ L S ++ RSVI SGTL+P+ + EL + + L H
Sbjct: 468 FRCLSPSLPMSLLQREVRSVIFASGTLSPMKAMAQELNIKEHLYKNIIISPGYRMLSTQH 527
Query: 136 VIDKDQVFIGVLGQGQ--KVFI 155
V+ VF V+G K FI
Sbjct: 528 VVPPSHVFGRVIGSSSFGKSFI 549
>gi|156047833|ref|XP_001589884.1| hypothetical protein SS1G_09606 [Sclerotinia sclerotiorum 1980]
gi|154694001|gb|EDN93739.1| hypothetical protein SS1G_09606 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 616
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEANH 135
LHF CL++ + + E SVI+TSGT++P++ F+ + +P+ L A H
Sbjct: 404 VLHFTCLDAAIAIKPVFERFSSVIITSGTISPLEMYPKMLDFECVVQESYPMTL-ARH 460
>gi|154296465|ref|XP_001548663.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
Length = 764
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKL 131
LHF CL++ + + E SVI+TSGT++P++ +F+ + +P+ L
Sbjct: 398 VLHFTCLDAAIAIKPVFERFSSVIITSGTISPLEMYPKMLNFECVVQESYPMTL 451
>gi|68471265|ref|XP_720409.1| hypothetical protein CaO19.7119 [Candida albicans SC5314]
gi|77022390|ref|XP_888639.1| hypothetical protein CaO19_7119 [Candida albicans SC5314]
gi|46442275|gb|EAL01566.1| hypothetical protein CaO19.7119 [Candida albicans SC5314]
gi|76573452|dbj|BAE44536.1| hypothetical protein [Candida albicans]
Length = 765
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
LHF CL++ + + + SVI+TSGT++P+D + L
Sbjct: 434 LHFTCLDASIAIKPVFDRFSSVIITSGTISPLDMYPKML 472
>gi|347831219|emb|CCD46916.1| similar to DNA repair helicase RAD3 [Botryotinia fuckeliana]
Length = 770
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKL 131
LHF CL++ + + E SVI+TSGT++P++ +F+ + +P+ L
Sbjct: 404 VLHFTCLDAAIAIKPVFERFSSVIITSGTISPLEMYPKMLNFECVVQESYPMTL 457
>gi|401423118|ref|XP_003876046.1| putative DNA excision repair protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492286|emb|CBZ27561.1| putative DNA excision repair protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 813
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 89 CLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
C+++ L D RSVILTSGTL+P+D + LG
Sbjct: 437 CVDASLALRDTFSRYRSVILTSGTLSPMDIYPKILG 472
>gi|302504842|ref|XP_003014642.1| hypothetical protein ARB_07204 [Arthroderma benhamiae CBS 112371]
gi|291177948|gb|EFE33739.1| hypothetical protein ARB_07204 [Arthroderma benhamiae CBS 112371]
Length = 812
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 67 ESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQ 126
E +Y K + +KY L L+ F ++ E AR+VIL GT+ P+D + + L +
Sbjct: 478 EGRLFYEKVGGDVQLKYLL----LDPTSRFKELVEDARAVILAGGTMEPMDDYVNHLLSY 533
Query: 127 FP---IK-LEANHVIDKDQVFIGVLGQG 150
P IK HVI KD + + +G
Sbjct: 534 LPREKIKTFTYGHVIPKDNLMAIPIDRG 561
>gi|238583124|ref|XP_002390145.1| hypothetical protein MPER_10632 [Moniliophthora perniciosa FA553]
gi|215453212|gb|EEB91075.1| hypothetical protein MPER_10632 [Moniliophthora perniciosa FA553]
Length = 564
Score = 37.7 bits (86), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 81 IKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAP----VDSFQSELGTQFPIKLEANHV 136
IKY L LN F ++ +SARSVIL GT++P VD S L T+ H+
Sbjct: 473 IKYQL----LNPAPHFREVVDSARSVILAGGTMSPMSDIVDQLFSHLPTERISTFSCGHI 528
Query: 137 IDKDQVFIGVLGQG 150
I+ + + +G
Sbjct: 529 INSSSLLTLAVTKG 542
>gi|169625336|ref|XP_001806072.1| hypothetical protein SNOG_15940 [Phaeosphaeria nodorum SN15]
gi|160705637|gb|EAT76778.2| hypothetical protein SNOG_15940 [Phaeosphaeria nodorum SN15]
Length = 1396
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Query: 66 GESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
E +Y K+ + ++++Y L L+ F DI E AR+V+L GT++P+ ++ L
Sbjct: 516 AEGRFFYSKEDSCVTLRYML----LDPTYHFKDIVEEARAVVLAGGTMSPMSDYEQHL 569
>gi|157870391|ref|XP_001683746.1| putative DNA excision repair protein [Leishmania major strain
Friedlin]
gi|68126812|emb|CAJ05417.1| putative DNA excision repair protein [Leishmania major strain
Friedlin]
Length = 813
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 89 CLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
C+++ L D RSVILTSGTL+P+D + LG
Sbjct: 437 CVDASLALRDTFARHRSVILTSGTLSPMDIYPKILG 472
>gi|150863715|ref|XP_001382279.2| YPL008W (CHL1)-like protein [Scheffersomyces stipitis CBS 6054]
gi|206558237|sp|A3LN13.2|CHL1_PICST RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|149384971|gb|ABN64250.2| syntenic [Scheffersomyces stipitis CBS 6054]
Length = 835
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 14/70 (20%)
Query: 80 SIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI-------KLE 132
SIKY L L+ VF DI AR VIL GT+ P+ F++ L FP
Sbjct: 525 SIKYML----LDPSSVFKDIVSKARCVILCGGTMEPMSEFKNFL---FPYVEDKKIKSFS 577
Query: 133 ANHVIDKDQV 142
NH+I D +
Sbjct: 578 CNHIIPPDNL 587
>gi|398016273|ref|XP_003861325.1| TFIIH basal transcription factor complex helicase subunit, putative
[Leishmania donovani]
gi|322499550|emb|CBZ34624.1| TFIIH basal transcription factor complex helicase subunit, putative
[Leishmania donovani]
Length = 813
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 89 CLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
C+++ L D RSVILTSGTL+P+D + LG
Sbjct: 437 CVDASLALRDTFARYRSVILTSGTLSPMDIYPKILG 472
>gi|240976653|ref|XP_002402458.1| DNA repair helicase rad3/xp-D, putative [Ixodes scapularis]
gi|215491179|gb|EEC00820.1| DNA repair helicase rad3/xp-D, putative [Ixodes scapularis]
Length = 758
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFP 128
DRTP L+ C+++ + + +SVI+TSGTL+PVD F+ + F
Sbjct: 425 DRTPGVPNPVLNLSCMDASIAIKPVFNRFQSVIITSGTLSPVDMYPKILDFRPVISASFT 484
Query: 129 IKL 131
I L
Sbjct: 485 ITL 487
>gi|354557636|ref|ZP_08976894.1| DEAD_2 domain protein [Desulfitobacterium metallireducens DSM
15288]
gi|353550430|gb|EHC19867.1| DEAD_2 domain protein [Desulfitobacterium metallireducens DSM
15288]
Length = 771
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 61 ADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQ 120
A+ Y N Y++ + S+K +CL+ L+ ++ + R+ IL S TL+P++ F
Sbjct: 478 AEYYDERYNTLYKQGQEGFSVK----LYCLDPSLLLAESFKRGRAAILFSATLSPIEYFM 533
Query: 121 SELG 124
LG
Sbjct: 534 KILG 537
>gi|367035588|ref|XP_003667076.1| hypothetical protein MYCTH_104059 [Myceliophthora thermophila ATCC
42464]
gi|347014349|gb|AEO61831.1| hypothetical protein MYCTH_104059 [Myceliophthora thermophila ATCC
42464]
Length = 799
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANH 135
LHF CL++ + + + SV++TSGTL+P++ + L FP ++ ++
Sbjct: 429 VLHFTCLDAAIAIKPVFDRFSSVVITSGTLSPLEMYPKMLN--FPTVVQESY 478
>gi|238883179|gb|EEQ46817.1| DNA repair helicase RAD3 [Candida albicans WO-1]
Length = 701
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
LHF CL++ + + + SVI+TSGT++P+D + L
Sbjct: 434 LHFTCLDASIAIKPVFDRFSSVIITSGTISPLDMYPKML 472
>gi|19074270|ref|NP_585776.1| DNA REPAIR HELICASE OF THE RAD3/XPD SUBFAMILY [Encephalitozoon
cuniculi GB-M1]
gi|19068912|emb|CAD25380.1| DNA REPAIR HELICASE OF THE RAD3/XPD SUBFAMILY [Encephalitozoon
cuniculi GB-M1]
Length = 742
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
TL CL+S + S + R+VI+TSGT++P+D +
Sbjct: 409 TLRLACLDSSIAISPVFARFRNVIITSGTMSPIDMY 444
>gi|449330281|gb|AGE96540.1| DNA repair helicase [Encephalitozoon cuniculi]
Length = 742
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
TL CL+S + S + R+VI+TSGT++P+D +
Sbjct: 409 TLRLACLDSSIAISPVFARFRNVIITSGTMSPIDMY 444
>gi|239793449|dbj|BAH72839.1| ACYPI008186 [Acyrthosiphon pisum]
Length = 325
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
+HF CL++ + I + +V++TSGTL+P+D + L I + +
Sbjct: 1 MHFSCLDASIAIKPILDYFNTVLITSGTLSPLDMYPKILNINPVIMTSLTMTLSRQCFLP 60
Query: 145 GVLGQG 150
V+G+G
Sbjct: 61 MVVGRG 66
>gi|146088245|ref|XP_001466027.1| TFIIH basal transcription factor complex helicase subunit
[Leishmania infantum JPCM5]
gi|134070128|emb|CAM68462.1| TFIIH basal transcription factor complex helicase subunit
[Leishmania infantum JPCM5]
Length = 813
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 89 CLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
C+++ L D RSVILTSGTL+P+D + LG
Sbjct: 437 CVDASLALRDTFARYRSVILTSGTLSPMDIYPKILG 472
>gi|393236508|gb|EJD44056.1| DNA repair helicase [Auricularia delicata TFB-10046 SS5]
Length = 810
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
HF CL+ L I E SV++TSGT++P+D + L
Sbjct: 438 VFHFTCLDPSLAIKPIFERFSSVVITSGTISPLDMYPKML 477
>gi|46126959|ref|XP_388033.1| hypothetical protein FG07857.1 [Gibberella zeae PH-1]
Length = 863
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP-------IKLEANHVI 137
L + L+ FS I SAR+VIL GT++P D ++ L FP L HVI
Sbjct: 536 LSYLLLSPTHAFSSIASSARAVILAGGTMSPFDDYKDHL---FPSLEPEKVTTLSCGHVI 592
Query: 138 DKDQVFIGVLGQGQ 151
+ + + L +
Sbjct: 593 PPENLCVWTLASSR 606
>gi|408390405|gb|EKJ69805.1| hypothetical protein FPSE_10005 [Fusarium pseudograminearum CS3096]
Length = 863
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP-------IKLEANHVI 137
L + L+ FS I SAR+VIL GT++P D ++ L FP L HVI
Sbjct: 536 LSYLLLSPTHAFSSIASSARAVILAGGTMSPFDDYKDHL---FPSLEPDKVTTLSCGHVI 592
Query: 138 DKDQVFIGVLG 148
+ + + L
Sbjct: 593 PPENLCVWTLA 603
>gi|205716435|sp|A8MPP1.1|D11L8_HUMAN RecName: Full=Putative ATP-dependent RNA helicase DDX11-like
protein 8; AltName: Full=DEAD/H box protein 11-like 8
Length = 907
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 596 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 655
Query: 138 DKDQV 142
D +
Sbjct: 656 PPDNI 660
>gi|403338080|gb|EJY68268.1| hypothetical protein OXYTRI_11217 [Oxytricha trifallax]
Length = 779
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVI 137
L F+CL++ + + R+VI+TSGT++P++ + L Q P + A ++I
Sbjct: 463 LQFYCLDASIATKPVFNRFRNVIMTSGTISPIEIYPKMLDFQ-PKTMRAFNII 514
>gi|407420088|gb|EKF38458.1| helicase-like protein, putative [Trypanosoma cruzi marinkellei]
Length = 956
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 80 SIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP--IKLEANHVI 137
+++ T+ CL+ L F + V+L SGTLAP +LG E H+
Sbjct: 548 TMRRTVGIRCLDGSLAFHHLLAVTHRVVLASGTLAPFHQLGQDLGISLSEMATYEGLHIA 607
Query: 138 DKDQVFIGVL 147
D Q I VL
Sbjct: 608 DVHQYRISVL 617
>gi|344228422|gb|EGV60308.1| DNA helicase component of transcription factor b [Candida tenuis
ATCC 10573]
Length = 797
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L F CL++ + + + SVI+TSGT++P+D + L + I+ +D+
Sbjct: 443 LRFTCLDASIAMKPVFDRFSSVIITSGTISPLDMYPKMLNFETVIQRSYTMTLDRRSFLP 502
Query: 145 GVLGQG 150
++ +G
Sbjct: 503 MIVTKG 508
>gi|312097463|ref|XP_003148983.1| TFIIH basal transcription factor complex helicase subunit [Loa loa]
Length = 374
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 25/36 (69%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
TLH C+++ + I + R+V++TSGTL+P+D +
Sbjct: 59 TLHLSCMDASVAIRPIFQRYRTVVITSGTLSPLDMY 94
>gi|156846864|ref|XP_001646318.1| hypothetical protein Kpol_1032p54 [Vanderwaltozyma polyspora DSM
70294]
gi|156116993|gb|EDO18460.1| hypothetical protein Kpol_1032p54 [Vanderwaltozyma polyspora DSM
70294]
Length = 776
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 8/55 (14%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDK 139
L F CL++ + + E SVI+TSGT++P+D +P L N V++K
Sbjct: 435 LRFTCLDASIAIKPVFEKFSSVIITSGTISPLD--------MYPRMLNFNTVLEK 481
>gi|119608988|gb|EAW88582.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae), isoform CRA_g [Homo sapiens]
gi|119608989|gb|EAW88583.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae), isoform CRA_h [Homo sapiens]
Length = 683
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 594 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 653
Query: 138 DKDQV 142
D +
Sbjct: 654 PPDNI 658
>gi|119608986|gb|EAW88580.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae), isoform CRA_e [Homo sapiens]
Length = 657
Score = 37.4 bits (85), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 568 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 627
Query: 138 DKDQV 142
D +
Sbjct: 628 PPDNI 632
>gi|440635897|gb|ELR05816.1| DNA repair helicase rad15 [Geomyces destructans 20631-21]
Length = 795
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LHF CL++ + + + SVI+TSGTL+P++ +
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMY 466
>gi|367055120|ref|XP_003657938.1| hypothetical protein THITE_2124189 [Thielavia terrestris NRRL 8126]
gi|347005204|gb|AEO71602.1| hypothetical protein THITE_2124189 [Thielavia terrestris NRRL 8126]
Length = 800
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANH 135
LHF CL++ + + + SVI+TSGT++P++ + L FP ++ ++
Sbjct: 431 VLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLN--FPTVVQESY 480
>gi|398396280|ref|XP_003851598.1| hypothetical protein MYCGRDRAFT_86617 [Zymoseptoria tritici IPO323]
gi|339471478|gb|EGP86574.1| hypothetical protein MYCGRDRAFT_86617 [Zymoseptoria tritici IPO323]
Length = 825
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 8/58 (13%)
Query: 71 WYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP 128
W ++D+ ++I+Y L L+ F ++ ESAR+VIL GT++P++ ++ +L FP
Sbjct: 520 WSKEDKN-ITIRYLL----LDPSEHFREVVESARAVILAGGTMSPMEEYKQQL---FP 569
>gi|406605469|emb|CCH43113.1| DNA excision repair protein [Wickerhamomyces ciferrii]
Length = 781
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L F CL++ + I E SVI+TSGT++P+D + L + I+ + + K
Sbjct: 434 LRFTCLDASIAIKPIFERFSSVIITSGTISPLDMYPRMLNFETVIQESYSMTLAKRSFLP 493
Query: 145 GVLGQG 150
V+ +G
Sbjct: 494 LVVTKG 499
>gi|302681585|ref|XP_003030474.1| hypothetical protein SCHCODRAFT_77555 [Schizophyllum commune H4-8]
gi|300104165|gb|EFI95571.1| hypothetical protein SCHCODRAFT_77555 [Schizophyllum commune H4-8]
Length = 792
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQFPIKLEANHVI 137
HF CL+ L + E SV++TSGT++P+D F + +P+ L N +
Sbjct: 440 FHFACLDPSLAIQPVFERFSSVVITSGTISPLDMYPKMLQFTPVVQESYPMTLTRNSFL 498
>gi|326478541|gb|EGE02551.1| DNA helicase [Trichophyton equinum CBS 127.97]
Length = 850
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 67 ESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQ 126
E +Y K + +KY L L+ F ++ E AR+VIL GT+ P+D + + L +
Sbjct: 517 EGRLFYEKVGGDIQMKYLL----LDPTSRFKELVEDARAVILAGGTMEPMDDYVNHLLSY 572
Query: 127 FP---IK-LEANHVIDKDQVFIGVLGQG 150
P IK HVI KD + + +G
Sbjct: 573 VPRDKIKTFTYGHVIPKDNLMAIPIDRG 600
>gi|426200162|gb|EKV50086.1| hypothetical protein AGABI2DRAFT_183219 [Agaricus bisporus var.
bisporus H97]
Length = 792
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
HF CL+ L + E SV++TSGT++P+D + L
Sbjct: 438 FHFTCLDPSLAIKPVFERFSSVVITSGTISPLDMYPKML 476
>gi|409082328|gb|EKM82686.1| hypothetical protein AGABI1DRAFT_118129 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 792
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
HF CL+ L + E SV++TSGT++P+D + L
Sbjct: 438 FHFTCLDPSLAIKPVFERFSSVVITSGTISPLDMYPKML 476
>gi|336364077|gb|EGN92441.1| hypothetical protein SERLA73DRAFT_99245 [Serpula lacrymans var.
lacrymans S7.3]
Length = 793
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
HF CL+ L + E SV++TSGT++P+D + L
Sbjct: 440 FHFTCLDPSLAIKPVFERFSSVVITSGTISPLDMYPKML 478
>gi|326470360|gb|EGD94369.1| DNA repair helicase (rad3) [Trichophyton tonsurans CBS 112818]
Length = 847
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 67 ESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQ 126
E +Y K + +KY L L+ F ++ E AR+VIL GT+ P+D + + L +
Sbjct: 514 EGRLFYEKVGGDIQMKYLL----LDPTSRFKELVEDARAVILAGGTMEPMDDYVNHLLSY 569
Query: 127 FP---IK-LEANHVIDKDQVFIGVLGQG 150
P IK HVI KD + + +G
Sbjct: 570 VPRDKIKTFTYGHVIPKDNLMAIPIDRG 597
>gi|322707662|gb|EFY99240.1| DNA repair helicase RAD3 [Metarhizium anisopliae ARSEF 23]
Length = 716
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LHF CL++ + + E SVI+TSGT++P++ +
Sbjct: 357 LHFTCLDAAIAIRPVFERFYSVIITSGTISPLEMY 391
>gi|50293497|ref|XP_449160.1| hypothetical protein [Candida glabrata CBS 138]
gi|74637307|sp|Q6FKT4.1|CHL1_CANGA RecName: Full=ATP-dependent RNA helicase CHL1; AltName:
Full=Chromosome loss protein 1
gi|49528473|emb|CAG62130.1| unnamed protein product [Candida glabrata]
Length = 830
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 4/75 (5%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP----IKLEANHVIDK 139
+L + L +F DI +SAR VIL GT+ PV L + K NHVI
Sbjct: 528 SLRYMLLEPSRIFQDIIDSARCVILAGGTMEPVSQLLQYLVPKLDDSSITKFSCNHVIPD 587
Query: 140 DQVFIGVLGQGQKVF 154
+ ++ + Q F
Sbjct: 588 SHLRTYIVNEPQFEF 602
>gi|392595870|gb|EIW85193.1| DNA repair helicase [Coniophora puteana RWD-64-598 SS2]
Length = 787
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
HF CL+ L + E SV++TSGT++P+D + L
Sbjct: 438 FHFTCLDPSLAIKPVFERFSSVVITSGTISPLDMYPKML 476
>gi|335310791|ref|XP_003362194.1| PREDICTED: TFIIH basal transcription factor complex helicase XPD
subunit, partial [Sus scrofa]
Length = 308
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTL 113
DRTP LHF C+++ L + E +SVI+TSG L
Sbjct: 248 DRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGIL 286
>gi|322692960|gb|EFY84841.1| DNA repair helicase RAD3 [Metarhizium acridum CQMa 102]
Length = 716
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LHF CL++ + + E SVI+TSGT++P++ +
Sbjct: 357 LHFTCLDAAIAIRPVFERFYSVIITSGTISPLEMY 391
>gi|258563374|ref|XP_002582432.1| DNA repair helicase RAD3 [Uncinocarpus reesii 1704]
gi|237907939|gb|EEP82340.1| DNA repair helicase RAD3 [Uncinocarpus reesii 1704]
Length = 474
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LHF CL++ + + + SVI+TSGTL+P++ +
Sbjct: 188 LHFTCLDAAIAIKPVFDRFSSVIITSGTLSPLEMY 222
>gi|50306065|ref|XP_452994.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642127|emb|CAH01845.1| KLLA0C17776p [Kluyveromyces lactis]
Length = 778
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
+ F CL++ + I E SVI+TSGT++P+D + L + ++ + + K
Sbjct: 435 VRFTCLDASIAIKPIFERFSSVIITSGTISPLDMYPKMLNFETVLQQSYSMTLAKKSFLP 494
Query: 145 GVLGQG 150
+L +G
Sbjct: 495 MILTKG 500
>gi|391325164|ref|XP_003737109.1| PREDICTED: LOW QUALITY PROTEIN: TFIIH basal transcription factor
complex helicase XPD subunit-like [Metaseiulus
occidentalis]
Length = 762
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP TL C+++ + + +SVI+TSGTL+P++ +
Sbjct: 421 DRTPNIPNCTLQLSCMDASIAIRPVFHRFQSVIITSGTLSPLEMY 465
>gi|328855625|gb|EGG04750.1| hypothetical protein MELLADRAFT_108080 [Melampsora larici-populina
98AG31]
Length = 795
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 35/67 (52%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
H CL++ L + + SV++TSGT++P+D + LG + ++ + + ++
Sbjct: 442 VFHLTCLDASLAIKPVFDRFSSVVITSGTISPLDMYPKMLGFESAVQESYSMTLTRNCFL 501
Query: 144 IGVLGQG 150
V+ +G
Sbjct: 502 PLVITRG 508
>gi|325090321|gb|EGC43631.1| DNA repair helicase RAD3 [Ajellomyces capsulatus H88]
Length = 797
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LHF CL++ + + + SVI+TSGTL+P++ +
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIVTSGTLSPLEMY 466
>gi|225560307|gb|EEH08589.1| DNA repair helicase RAD3 [Ajellomyces capsulatus G186AR]
Length = 797
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LHF CL++ + + + SVI+TSGTL+P++ +
Sbjct: 432 LHFTCLDAAIAIKPVFDRFSSVIVTSGTLSPLEMY 466
>gi|145353086|ref|XP_001420860.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581095|gb|ABO99153.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 788
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
+R P L CL++ L + E +SV +TSGTL+P+D + LG
Sbjct: 439 ERYPNIPDPVLQLACLDASLAIKPVFERFQSVFITSGTLSPIDLYPKLLG 488
>gi|119608982|gb|EAW88576.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae), isoform CRA_a [Homo sapiens]
Length = 361
Score = 37.0 bits (84), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 272 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 331
Query: 138 DKDQV 142
D +
Sbjct: 332 PPDNI 336
>gi|408395822|gb|EKJ74995.1| hypothetical protein FPSE_04815 [Fusarium pseudograminearum CS3096]
Length = 789
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK 130
LHF CL++ + + + SVI+TSGT++P++ + L Q I+
Sbjct: 431 VLHFTCLDAAIAIKPVFDRFYSVIITSGTISPLEIYPKMLDFQTVIQ 477
>gi|327351176|gb|EGE80033.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis ATCC 18188]
Length = 773
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LHF CL++ + + + SVI+TSGTL+P++ +
Sbjct: 408 LHFTCLDAAIAIKPVFDRFSSVIVTSGTLSPLEMY 442
>gi|430812749|emb|CCJ29870.1| unnamed protein product [Pneumocystis jirovecii]
Length = 850
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPI-------KLEANHVI 137
L + LN F +I AR+VIL GT+ P+D F +L FP + H+I
Sbjct: 529 LKYLLLNPCYQFKEIVNEARAVILAGGTMEPMDDFIYQL---FPYLQKEKIHRFSCGHII 585
Query: 138 DKDQVFIGVLGQG--QKVFI 155
D + ++ G +K FI
Sbjct: 586 SPDHLCAIIVSTGPTRKEFI 605
>gi|46116906|ref|XP_384471.1| hypothetical protein FG04295.1 [Gibberella zeae PH-1]
Length = 761
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIK 130
LHF CL++ + + + SVI+TSGT++P++ + L Q I+
Sbjct: 403 VLHFTCLDAAIAIKPVFDRFYSVIITSGTISPLEIYPKMLDFQTVIQ 449
>gi|302901601|ref|XP_003048472.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729405|gb|EEU42759.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 761
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LHF CL++ + + E SVI+TSGT++P++ +
Sbjct: 404 LHFTCLDAAIAIRPVFERFYSVIITSGTISPLEIY 438
>gi|240278769|gb|EER42275.1| DNA repair helicase RAD3 [Ajellomyces capsulatus H143]
Length = 773
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LHF CL++ + + + SVI+TSGTL+P++ +
Sbjct: 408 LHFTCLDAAIAIKPVFDRFSSVIVTSGTLSPLEMY 442
>gi|239607217|gb|EEQ84204.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis ER-3]
Length = 779
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LHF CL++ + + + SVI+TSGTL+P++ +
Sbjct: 414 LHFTCLDAAIAIKPVFDRFSSVIVTSGTLSPLEMY 448
>gi|261200873|ref|XP_002626837.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis SLH14081]
gi|239593909|gb|EEQ76490.1| DNA repair helicase RAD3 [Ajellomyces dermatitidis SLH14081]
Length = 773
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LHF CL++ + + + SVI+TSGTL+P++ +
Sbjct: 408 LHFTCLDAAIAIKPVFDRFSSVIVTSGTLSPLEMY 442
>gi|154276530|ref|XP_001539110.1| DNA repair helicase RAD3 [Ajellomyces capsulatus NAm1]
gi|150414183|gb|EDN09548.1| DNA repair helicase RAD3 [Ajellomyces capsulatus NAm1]
Length = 683
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
LHF CL++ + + + SVI+TSGTL+P++ +
Sbjct: 318 LHFTCLDAAIAIKPVFDRFSSVIVTSGTLSPLEMY 352
>gi|429328706|gb|AFZ80466.1| DNA repair helicase rad3/xp-D, putative [Babesia equi]
Length = 851
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
L F CL++ + + E RSVILTSGT++P++ +
Sbjct: 524 LQFSCLDASIAMRPVLEGFRSVILTSGTISPLEFY 558
>gi|358369042|dbj|GAA85657.1| DEAD_2 protein [Aspergillus kawachii IFO 4308]
Length = 519
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 66 GESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGT 125
E +Y K++ + +KY L L+ F ++ E AR+VIL GT++P+ + + L +
Sbjct: 5 AEGRLFYLKEQGDIQLKYML----LDPTNQFRELVEDARAVILAGGTMSPMTDYMNHLFS 60
Query: 126 QFPIK----LEANHVIDKDQVFIGVLGQG 150
P HVI + + L +G
Sbjct: 61 YVPASRLDTFSYGHVIPPENLIAHTLVRG 89
>gi|350631746|gb|EHA20117.1| ATP-dependent DNA helicase-like protein [Aspergillus niger ATCC
1015]
Length = 987
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 66 GESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGT 125
E +Y K++ + +KY L L+ F ++ E AR++IL GT++P+ + + L +
Sbjct: 497 AEGRLFYSKEQGDIQLKYML----LDPTNQFRELVEDARAIILAGGTMSPMTDYMNHLFS 552
Query: 126 QFPIK----LEANHVIDKDQVFIGVLGQG 150
P HVI + + L +G
Sbjct: 553 YVPASRLDMFSYGHVIPPENLIAHTLVRG 581
>gi|206558115|sp|A2QY22.1|CHL1_ASPNC RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|134079766|emb|CAK40902.1| unnamed protein product [Aspergillus niger]
Length = 874
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 66 GESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGT 125
E +Y K++ + +KY L L+ F ++ E AR++IL GT++P+ + + L +
Sbjct: 539 AEGRLFYSKEQGDIQLKYML----LDPTNQFRELVEDARAIILAGGTMSPMTDYMNHLFS 594
Query: 126 QFPIK----LEANHVIDKDQVFIGVLGQG 150
P HVI + + L +G
Sbjct: 595 YVPASRLDTFSYGHVIPPENLIAHTLVRG 623
>gi|119608985|gb|EAW88579.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase
homolog, S. cerevisiae), isoform CRA_d [Homo sapiens]
Length = 313
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL------GTQFPIKLEANHVI 137
TL F LN + F+ + + R+V++ GT+ PV F+ +L + ++ HVI
Sbjct: 224 TLKFLLLNPAVHFAQVVKECRAVVIAGGTMQPVSDFRQQLLACAGVEAERVVEFSCGHVI 283
Query: 138 DKDQV 142
D +
Sbjct: 284 PPDNI 288
>gi|391868700|gb|EIT77910.1| helicase of the DEAD superfamily [Aspergillus oryzae 3.042]
Length = 734
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 66 GESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGT 125
E +Y K + + +KY L L+ F +I + AR+VIL GT++P+ + L
Sbjct: 396 AEGKLFYIKAQGDIQLKYML----LDPMNQFREIVDDARAVILAGGTMSPMTDYIHHLFP 451
Query: 126 QFPIK----LEANHVIDKDQVFIGVLGQG 150
P HVI + + VLG+G
Sbjct: 452 YVPSSRLGTFSYGHVIPPENLIAQVLGKG 480
>gi|121701205|ref|XP_001268867.1| TFIIH complex helicase Rad3, putative [Aspergillus clavatus NRRL 1]
gi|119397010|gb|EAW07441.1| TFIIH complex helicase Rad3, putative [Aspergillus clavatus NRRL 1]
Length = 771
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
LHF CL++ + + + SVI+TSGTL+P++ + L
Sbjct: 408 LHFTCLDASIAIKPVFDRFSSVIITSGTLSPLEMYPKML 446
>gi|302654465|ref|XP_003019039.1| hypothetical protein TRV_06940 [Trichophyton verrucosum HKI 0517]
gi|291182731|gb|EFE38394.1| hypothetical protein TRV_06940 [Trichophyton verrucosum HKI 0517]
Length = 859
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 67 ESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQ 126
E +Y K + +KY L L+ F ++ E AR+VIL GT+ P+D + + L +
Sbjct: 525 EGRLFYEKVGGDVQLKYLL----LDPTSRFRELVEDARAVILAGGTMEPMDDYVNHLLSY 580
Query: 127 FP---IK-LEANHVIDKDQVF 143
P IK HVI KD +
Sbjct: 581 VPREKIKTFTYGHVIPKDNLM 601
>gi|317032533|ref|XP_001395061.2| ATP-dependent RNA helicase CHL1 [Aspergillus niger CBS 513.88]
Length = 834
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 66 GESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGT 125
E +Y K++ + +KY L L+ F ++ E AR++IL GT++P+ + + L +
Sbjct: 499 AEGRLFYSKEQGDIQLKYML----LDPTNQFRELVEDARAIILAGGTMSPMTDYMNHLFS 554
Query: 126 QFPIK----LEANHVIDKDQVFIGVLGQG 150
P HVI + + L +G
Sbjct: 555 YVPASRLDTFSYGHVIPPENLIAHTLVRG 583
>gi|296423910|ref|XP_002841495.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637735|emb|CAZ85686.1| unnamed protein product [Tuber melanosporum]
Length = 748
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVI 137
LHF CL++ + + E SV++TSGT++P++ +P L+ N V+
Sbjct: 445 LHFTCLDASIAIRPVFERFSSVVITSGTISPLE--------MYPKMLQFNTVV 489
>gi|290991586|ref|XP_002678416.1| DEAD/DEAH box helicase [Naegleria gruberi]
gi|284092028|gb|EFC45672.1| DEAD/DEAH box helicase [Naegleria gruberi]
Length = 902
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 79 MSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEAN--HV 136
+++ + F LN + F I + ARSVILT GT+ P+ Q + FP K E++ H+
Sbjct: 567 IAVNNFIKFLLLNPSVYFQSILKEARSVILTGGTMEPI---QQLIQQVFP-KTESSKIHI 622
Query: 137 IDKDQVFIGVLGQGQKVFIGV-LGQGPQNIPLQALYKNTLVGDV 179
D+ + Q F+ + L +G +I L +KN D
Sbjct: 623 YQCDKHIV-----PQNHFLPIALSKGVDDIVLDFTFKNRQKNDA 661
>gi|121799524|sp|Q2U587.1|CHL1_ASPOR RecName: Full=ATP-dependent RNA helicase chl1; AltName:
Full=Chromosome loss protein 1
gi|83773151|dbj|BAE63278.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 721
Score = 36.6 bits (83), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 66 GESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGT 125
E +Y K + + +KY L L+ F +I + AR+VIL GT++P+ + L
Sbjct: 396 AEGKLFYIKAQGDIQLKYML----LDPMNQFREIVDDARAVILAGGTMSPMTDYIHHLFP 451
Query: 126 QFPIK----LEANHVIDKDQVFIGVLGQG 150
P HVI + + VLG+G
Sbjct: 452 YVPSSRLGTFSYGHVIPPENLIAQVLGKG 480
>gi|116204809|ref|XP_001228215.1| hypothetical protein CHGG_10288 [Chaetomium globosum CBS 148.51]
gi|88176416|gb|EAQ83884.1| hypothetical protein CHGG_10288 [Chaetomium globosum CBS 148.51]
Length = 732
Score = 36.6 bits (83), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANH 135
LHF CL++ + + + SV++TSGT++P++ + L FP ++ ++
Sbjct: 376 LHFTCLDAAIAIKPVFDRFSSVVITSGTMSPLEMYPKML--DFPTVVQESY 424
>gi|407853226|gb|EKG06303.1| helicase-like protein, putative [Trypanosoma cruzi]
Length = 956
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 78 PMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP--IKLEANH 135
P S+ T+ CL+ L F + + V+L SGTLAP +LG E H
Sbjct: 546 PPSLLRTVGIRCLDGSLAFHHLLAATHRVVLASGTLAPFHQIGQDLGISLSDMATYEGLH 605
Query: 136 VIDKDQVFIGVL 147
+ Q I VL
Sbjct: 606 IAGVHQYRISVL 617
>gi|389748846|gb|EIM90023.1| DNA repair helicase [Stereum hirsutum FP-91666 SS1]
Length = 802
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
HF CL+ + + E SV++TSGT++P+D + L
Sbjct: 437 FHFTCLDPAIAIKPVFERFSSVVITSGTISPLDMYPKML 475
>gi|84999674|ref|XP_954558.1| rad3-like DNA helicase-related [Theileria annulata]
gi|65305556|emb|CAI73881.1| rad3-like DNA helicase-related, putative [Theileria annulata]
Length = 894
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 75 DRTPMSIKY--TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD------SFQSELGTQ 126
D P S Y + F CL++ + + E+ +SVILTSGT++P++ +F L
Sbjct: 558 DPFPKSAAYDPVIQFSCLDASVAMKPVLENFQSVILTSGTMSPLEFYPKILNFSPILTQS 617
Query: 127 FPIKLE 132
P+ L+
Sbjct: 618 LPMSLD 623
>gi|209879600|ref|XP_002141240.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
gi|209556846|gb|EEA06891.1| DNA repair helicase family protein [Cryptosporidium muris RN66]
Length = 835
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
+ CL+S + I + +S++LTSGTL+P+D + LG
Sbjct: 526 IQLSCLDSSIAMKPILDRYQSIVLTSGTLSPLDLYPKLLG 565
>gi|336468265|gb|EGO56428.1| hypothetical protein NEUTE1DRAFT_130389 [Neurospora tetrasperma
FGSC 2508]
gi|350289484|gb|EGZ70709.1| putative excision repair protein rhp3 [Neurospora tetrasperma FGSC
2509]
Length = 806
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
LHF CL++ + + + SVI+TSGT++P++ + L
Sbjct: 431 VLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKML 470
>gi|119720715|ref|YP_921210.1| DEAD_2 domain-containing protein [Thermofilum pendens Hrk 5]
gi|119525835|gb|ABL79207.1| DEAD_2 domain protein [Thermofilum pendens Hrk 5]
Length = 617
Score = 36.2 bits (82), Expect = 5.4, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
L+ W + SG + S + R VI SGTL+P+++F +G
Sbjct: 339 LNIWDMRSGEILSGVWRRFRRVIFMSGTLSPIEAFAETVG 378
>gi|16416010|emb|CAB91361.2| probable excision repair protein rhp3 [Neurospora crassa]
Length = 806
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
LHF CL++ + + + SVI+TSGT++P++ + L
Sbjct: 431 VLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKML 470
>gi|380094849|emb|CCC07351.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 806
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
LHF CL++ + + + SVI+TSGT++P++ + L
Sbjct: 431 VLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKML 470
>gi|171690222|ref|XP_001910036.1| hypothetical protein [Podospora anserina S mat+]
gi|170945059|emb|CAP71170.1| unnamed protein product [Podospora anserina S mat+]
Length = 802
Score = 36.2 bits (82), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELG 124
LHF CL++ + + + SVI+TSGT++P++ + L
Sbjct: 431 VLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKMLN 471
>gi|409045964|gb|EKM55444.1| hypothetical protein PHACADRAFT_256068 [Phanerochaete carnosa
HHB-10118-sp]
Length = 792
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
HF CL+ + + E SV++TSGT++P+D + L
Sbjct: 437 FHFTCLDPSIAIKTVFERFSSVVITSGTISPLDMYPKML 475
>gi|164428066|ref|XP_956536.2| DNA repair helicase RAD3 [Neurospora crassa OR74A]
gi|157071997|gb|EAA27300.2| DNA repair helicase RAD3 [Neurospora crassa OR74A]
Length = 796
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
LHF CL++ + + + SVI+TSGT++P++ + L
Sbjct: 421 VLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKML 460
>gi|336271859|ref|XP_003350687.1| hypothetical protein SMAC_02358 [Sordaria macrospora k-hell]
Length = 796
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%)
Query: 84 TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSEL 123
LHF CL++ + + + SVI+TSGT++P++ + L
Sbjct: 421 VLHFTCLDAAIAIKPVFDRFSSVIITSGTISPLEMYPKML 460
>gi|317151049|ref|XP_001824411.2| ATP-dependent RNA helicase CHL1 [Aspergillus oryzae RIB40]
Length = 858
Score = 36.2 bits (82), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 66 GESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGT 125
E +Y K + + +KY L L+ F +I + AR+VIL GT++P+ + L
Sbjct: 520 AEGKLFYIKAQGDIQLKYML----LDPMNQFREIVDDARAVILAGGTMSPMTDYIHHLFP 575
Query: 126 QFPIK----LEANHVIDKDQVFIGVLGQG 150
P HVI + + VLG+G
Sbjct: 576 YVPSSRLGTFSYGHVIPPENLIAQVLGKG 604
>gi|359416643|ref|ZP_09208939.1| ATP dependent helicase [Candidatus Haloredivivus sp. G17]
gi|358033000|gb|EHK01609.1| ATP dependent helicase [Candidatus Haloredivivus sp. G17]
Length = 615
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 11/82 (13%)
Query: 58 GPHADEYQGESNRWYRK-DRT------PMSIKYTLHFWCLNSGLVFSDIRESARSVILTS 110
G + ++GE N ++R +RT + +KYT CL+ + S A+S +L S
Sbjct: 321 GEALEGWKGEDNGFFRNIERTRNGSDRQIRVKYT----CLDPSISTSTPLNDAKSSVLMS 376
Query: 111 GTLAPVDSFQSELGTQFPIKLE 132
GTL P ++ LG + IK+E
Sbjct: 377 GTLKPQKMYEDLLGLEDAIKVE 398
>gi|238506092|ref|XP_002384248.1| DNA helicase, putative [Aspergillus flavus NRRL3357]
gi|220690362|gb|EED46712.1| DNA helicase, putative [Aspergillus flavus NRRL3357]
Length = 777
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 8/89 (8%)
Query: 66 GESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGT 125
E +Y K + + +KY L L+ F +I + AR+VIL GT++P+ + L
Sbjct: 439 AEGKLFYIKAQGDIQLKYML----LDPMNQFREIVDDARAVILAGGTMSPMTDYIHHLFP 494
Query: 126 QFPIK----LEANHVIDKDQVFIGVLGQG 150
P HVI + + VLG+G
Sbjct: 495 YVPSSRLGTFSYGHVIPPENLIAQVLGKG 523
>gi|124513258|ref|XP_001349985.1| DEAD box helicase, putative [Plasmodium falciparum 3D7]
gi|23615402|emb|CAD52393.1| DEAD box helicase, putative [Plasmodium falciparum 3D7]
Length = 1099
Score = 35.8 bits (81), Expect = 7.6, Method: Composition-based stats.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDL 26
M I+ SRKH CIN+ LK +NIN+L
Sbjct: 256 MIIIGSRKHLCINEAFLKKYKNINEL 281
>gi|70947340|ref|XP_743296.1| helicase [Plasmodium chabaudi chabaudi]
gi|56522723|emb|CAH77127.1| helicase, putative [Plasmodium chabaudi chabaudi]
Length = 902
Score = 35.4 bits (80), Expect = 8.8, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETEGESNRWYRKDRTPM 48
M I+ SRKH CIN+++++ N+N EL ET S Y++ T M
Sbjct: 129 MIIIGSRKHLCINEKIMRKCPNVN----ELNETCRSSKCKYKEGFTEM 172
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,803,974,704
Number of Sequences: 23463169
Number of extensions: 113986175
Number of successful extensions: 252382
Number of sequences better than 100.0: 894
Number of HSP's better than 100.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 199
Number of HSP's that attempted gapping in prelim test: 251042
Number of HSP's gapped (non-prelim): 1398
length of query: 179
length of database: 8,064,228,071
effective HSP length: 133
effective length of query: 46
effective length of database: 9,238,593,890
effective search space: 424975318940
effective search space used: 424975318940
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 72 (32.3 bits)