Your job contains 1 sequence.
>psy876
MTILSSRKHTCINDEVLKAKENINDLCQELKETEGESNRWYRKDRTPMRGIEPVVSQGPH
ADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQ
SELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYKNTLVGDV
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy876
(179 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-081107-11 - symbol:brip1 "BRCA1 interacting... 238 1.7e-25 2
UNIPROTKB|E1C1X9 - symbol:BRIP1 "Fanconi anemia group J p... 217 6.1e-23 2
UNIPROTKB|Q3YK19 - symbol:BRIP1 "Fanconi anemia group J p... 217 6.1e-23 2
RGD|1307659 - symbol:Brip1 "BRCA1 interacting protein C-t... 219 1.3e-22 2
UNIPROTKB|D4ACW5 - symbol:Brip1 "Protein Brip1" species:1... 219 1.3e-22 2
UNIPROTKB|J3QSE8 - symbol:BRIP1 "Fanconi anemia group J p... 214 2.3e-22 2
UNIPROTKB|Q9BX63 - symbol:BRIP1 "Fanconi anemia group J p... 214 4.2e-22 2
UNIPROTKB|J9NVZ8 - symbol:BRIP1 "Uncharacterized protein"... 214 5.0e-22 2
UNIPROTKB|E2RHN5 - symbol:BRIP1 "Uncharacterized protein"... 214 5.3e-22 2
MGI|MGI:2442836 - symbol:Brip1 "BRCA1 interacting protein... 220 5.7e-22 2
UNIPROTKB|G3N0I3 - symbol:BRIP1 "Uncharacterized protein"... 210 7.1e-22 2
UNIPROTKB|E1BNG9 - symbol:BRIP1 "Uncharacterized protein"... 210 8.0e-22 2
UNIPROTKB|F1MMS0 - symbol:BRIP1 "Uncharacterized protein"... 210 9.3e-22 2
UNIPROTKB|I3LBL1 - symbol:BRIP1 "Uncharacterized protein"... 209 4.0e-21 2
TAIR|locus:2030497 - symbol:AT1G20720 species:3702 "Arabi... 205 3.6e-20 2
TAIR|locus:2016209 - symbol:AT1G79950 species:3702 "Arabi... 171 1.1e-15 2
UNIPROTKB|Q5RE34 - symbol:RTEL1 "Regulator of telomere el... 174 4.3e-14 2
UNIPROTKB|E1BTS7 - symbol:Gga.49055 "Uncharacterized prot... 168 9.2e-14 2
UNIPROTKB|E1BTS6 - symbol:Gga.49055 "Uncharacterized prot... 168 1.0e-13 2
UNIPROTKB|F1NE49 - symbol:Gga.49055 "Uncharacterized prot... 168 1.0e-13 2
UNIPROTKB|D6RA96 - symbol:RTEL1-TNFRSF6B "Protein RTEL1-T... 167 1.0e-13 2
ZFIN|ZDB-GENE-050306-11 - symbol:rtel1 "regulator of telo... 163 1.8e-13 2
WB|WBGene00001049 - symbol:dog-1 species:6239 "Caenorhabd... 157 3.1e-13 2
UNIPROTKB|Q9NZ71 - symbol:RTEL1 "Regulator of telomere el... 167 3.2e-13 2
UNIPROTKB|F6WH68 - symbol:RTEL1 "Protein RTEL1-TNFRSF6B" ... 167 4.4e-13 2
UNIPROTKB|F1MWN6 - symbol:RTEL1 "Regulator of telomere el... 153 1.2e-12 2
UNIPROTKB|B0W9F4 - symbol:CPIJ003765 "Regulator of telome... 154 3.4e-12 2
UNIPROTKB|D4ACH4 - symbol:Rtel1 "Regulator of telomere el... 152 4.1e-12 2
UNIPROTKB|E2RLA6 - symbol:RTEL1 "Uncharacterized protein"... 153 4.6e-12 2
RGD|1306721 - symbol:Rtel1 "regulator of telomere elongat... 152 5.0e-12 2
UNIPROTKB|A4K436 - symbol:RTEL1 "Regulator of telomere el... 153 9.2e-12 2
UNIPROTKB|B4PZB4 - symbol:GE16425 "Regulator of telomere ... 143 9.2e-12 2
MGI|MGI:2139369 - symbol:Rtel1 "regulator of telomere elo... 147 1.2e-11 2
UNIPROTKB|Q7QEI1 - symbol:AGAP000634 "Regulator of telome... 146 1.2e-11 2
UNIPROTKB|B4GU19 - symbol:GL14463 "Regulator of telomere ... 142 1.2e-11 2
UNIPROTKB|Q29FS3 - symbol:GA17940 "Regulator of telomere ... 142 1.2e-11 2
UNIPROTKB|Q16X92 - symbol:AAEL008960 "Regulator of telome... 148 2.5e-11 2
UNIPROTKB|Q6H1L8 - symbol:Rtel1 "Regulator of telomere el... 143 3.0e-11 2
FB|FBgn0029798 - symbol:CG4078 species:7227 "Drosophila m... 138 3.1e-11 2
UNIPROTKB|B3NSW1 - symbol:GG18780 "Regulator of telomere ... 138 3.9e-11 2
UNIPROTKB|B4I0K4 - symbol:GM12432 "Regulator of telomere ... 138 6.0e-11 2
UNIPROTKB|B4NDG5 - symbol:GK24923 "Regulator of telomere ... 138 1.0e-10 2
UNIPROTKB|B4L1Z2 - symbol:GI15901 "Regulator of telomere ... 138 1.1e-10 2
UNIPROTKB|B4M891 - symbol:GJ16649 "Regulator of telomere ... 139 1.7e-10 2
UNIPROTKB|B3MSG8 - symbol:GF20802 "Regulator of telomere ... 138 5.5e-10 2
DICTYBASE|DDB_G0286621 - symbol:fncJ "DEAD/DEAH box helic... 138 8.4e-10 2
UNIPROTKB|B4JNS2 - symbol:GH24089 "Regulator of telomere ... 131 1.1e-09 2
UNIPROTKB|A8WS58 - symbol:rtel-1 "Regulator of telomere e... 101 1.9e-05 2
WB|WBGene00009124 - symbol:rtel-1 species:6239 "Caenorhab... 101 2.4e-05 2
UNIPROTKB|Q93575 - symbol:rtel-1 "Regulator of telomere e... 101 2.4e-05 2
MGI|MGI:95413 - symbol:Ercc2 "excision repair cross-compl... 106 7.3e-05 2
UNIPROTKB|F1N2P3 - symbol:ERCC2 "TFIIH basal transcriptio... 105 7.7e-05 2
UNIPROTKB|A6QLJ0 - symbol:ERCC2 "TFIIH basal transcriptio... 105 7.8e-05 2
UNIPROTKB|J9NWT1 - symbol:ERCC2 "Uncharacterized protein"... 105 8.3e-05 2
UNIPROTKB|Q60452 - symbol:ERCC2 "TFIIH basal transcriptio... 105 9.8e-05 2
RGD|1309109 - symbol:Ercc2 "excision repair cross-complem... 105 9.8e-05 2
UNIPROTKB|F1PMH9 - symbol:ERCC2 "Uncharacterized protein"... 105 0.00010 2
UNIPROTKB|A8MX75 - symbol:ERCC2 "TFIIH basal transcriptio... 105 0.00010 2
UNIPROTKB|E7EVE9 - symbol:ERCC2 "TFIIH basal transcriptio... 105 0.00012 2
UNIPROTKB|P18074 - symbol:ERCC2 "TFIIH basal transcriptio... 105 0.00012 2
UNIPROTKB|K7EKF3 - symbol:ERCC2 "TFIIH basal transcriptio... 103 0.00065 1
FB|FBgn0261850 - symbol:Xpd "Xeroderma pigmentosum D" spe... 95 0.00081 2
>ZFIN|ZDB-GENE-081107-11 [details] [associations]
symbol:brip1 "BRCA1 interacting protein C-terminal
helicase 1" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
ZFIN:ZDB-GENE-081107-11 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 eggNOG:COG1199
TIGRFAMs:TIGR00604 CTD:83990 HOGENOM:HOG000068083
HOVERGEN:HBG081519 KO:K15362 OrthoDB:EOG4J6RQ8 EMBL:EF088194
IPI:IPI00877443 RefSeq:NP_001103766.1 UniGene:Dr.85128
ProteinModelPortal:A8QLH7 STRING:A8QLH7 GeneID:794038
KEGG:dre:794038 NextBio:20931680 ArrayExpress:A8QLH7 Uniprot:A8QLH7
Length = 1217
Score = 238 (88.8 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 45/92 (48%), Positives = 65/92 (70%)
Query: 59 PHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDS 118
P A + +R + +RT ++ +TL FWCLN + FSD+ + RS++LTSGTL+P+ S
Sbjct: 593 PDAQGFFARPHRRRQSNRTK-TLVHTLSFWCLNPAVAFSDLSSTVRSIVLTSGTLSPMGS 651
Query: 119 FQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
F SELG +F I+LEANHVI+K QV++G +G G
Sbjct: 652 FSSELGIKFSIQLEANHVINKSQVWVGTIGAG 683
Score = 93 (37.8 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETE-GESNRWY 41
MTILSSR HTC++ EV+ N N+ C+E E + G S R+Y
Sbjct: 301 MTILSSRDHTCVHPEVVP-HANRNERCKEFLEAKNGRSCRYY 341
>UNIPROTKB|E1C1X9 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein homolog"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004003
TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199 EMBL:AADN02025783
IPI:IPI00820128 Ensembl:ENSGALT00000008466 ArrayExpress:E1C1X9
Uniprot:E1C1X9
Length = 1249
Score = 217 (81.4 bits), Expect = 6.1e-23, Sum P(2) = 6.1e-23
Identities = 39/79 (49%), Positives = 59/79 (74%)
Query: 72 YRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKL 131
++++ ++ + L+FWCLN + FSD+ + R+V+LTSGTL+P+DSF SELG +F I+L
Sbjct: 587 HKRNLRHKTVVHMLNFWCLNPAVAFSDLND-VRTVVLTSGTLSPMDSFSSELGVKFSIQL 645
Query: 132 EANHVIDKDQVFIGVLGQG 150
EANHVI QV++G +G G
Sbjct: 646 EANHVIRNSQVWVGTIGTG 664
Score = 90 (36.7 bits), Expect = 6.1e-23, Sum P(2) = 6.1e-23
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETE-GESNRWY 41
MTILSSR +TCI+ V + N N+LC EL E + G+S +Y
Sbjct: 282 MTILSSRDYTCIHPVVSSSNSNRNELCVELLEGKHGKSCLYY 323
>UNIPROTKB|Q3YK19 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein homolog"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0006357 GO:GO:0051539 GO:GO:0004003
Reactome:REACT_115612 eggNOG:COG1199 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:DQ109581 IPI:IPI00593256
RefSeq:NP_001028230.1 UniGene:Gga.17801 ProteinModelPortal:Q3YK19
STRING:Q3YK19 Ensembl:ENSGALT00000039225 GeneID:417642
KEGG:gga:417642 CTD:83990 HOGENOM:HOG000068083 HOVERGEN:HBG081519
InParanoid:Q3YK19 KO:K15362 OMA:GYETSCK OrthoDB:EOG4J6RQ8
NextBio:20820915 ArrayExpress:Q3YK19 Uniprot:Q3YK19
Length = 1252
Score = 217 (81.4 bits), Expect = 6.1e-23, Sum P(2) = 6.1e-23
Identities = 39/79 (49%), Positives = 59/79 (74%)
Query: 72 YRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKL 131
++++ ++ + L+FWCLN + FSD+ + R+V+LTSGTL+P+DSF SELG +F I+L
Sbjct: 587 HKRNLRHKTVVHMLNFWCLNPAVAFSDLND-VRTVVLTSGTLSPMDSFSSELGVKFSIQL 645
Query: 132 EANHVIDKDQVFIGVLGQG 150
EANHVI QV++G +G G
Sbjct: 646 EANHVIRNSQVWVGTIGTG 664
Score = 90 (36.7 bits), Expect = 6.1e-23, Sum P(2) = 6.1e-23
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETE-GESNRWY 41
MTILSSR +TCI+ V + N N+LC EL E + G+S +Y
Sbjct: 282 MTILSSRDYTCIHPVVSSSNSNRNELCVELLEGKHGKSCLYY 323
>RGD|1307659 [details] [associations]
symbol:Brip1 "BRCA1 interacting protein C-terminal helicase 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=ISO]
[GO:0071295 "cellular response to vitamin" evidence=IEP]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491 RGD:1307659
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
IPI:IPI00781914 Ensembl:ENSRNOT00000055817 ArrayExpress:D4AD12
GO:GO:0071295 Uniprot:D4AD12
Length = 818
Score = 219 (82.2 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 39/68 (57%), Positives = 51/68 (75%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+FWCLN + FSDI + R+++LTSGTL+P+ SF SELG F I+LEANHVI QV++
Sbjct: 512 LNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFNIQLEANHVISNSQVWV 571
Query: 145 GVLGQGQK 152
G +G G K
Sbjct: 572 GTVGSGPK 579
Score = 80 (33.2 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQEL 30
MTILSSR HTC++ EV+ N N+ C EL
Sbjct: 270 MTILSSRDHTCVHPEVV-GNFNRNEKCMEL 298
>UNIPROTKB|D4ACW5 [details] [associations]
symbol:Brip1 "Protein Brip1" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491 RGD:1307659
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 TIGRFAMs:TIGR00604 OrthoDB:EOG4J6RQ8 IPI:IPI00372668
Ensembl:ENSRNOT00000038829 ArrayExpress:D4ACW5 Uniprot:D4ACW5
Length = 1170
Score = 219 (82.2 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 39/68 (57%), Positives = 51/68 (75%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+FWCLN + FSDI + R+++LTSGTL+P+ SF SELG F I+LEANHVI QV++
Sbjct: 590 LNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFNIQLEANHVISNSQVWV 649
Query: 145 GVLGQGQK 152
G +G G K
Sbjct: 650 GTVGSGPK 657
Score = 84 (34.6 bits), Expect = 1.3e-22, Sum P(2) = 1.3e-22
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETE-GESNRWY 41
MTILSSR HTC++ EV+ N N+ C EL + + G+S +Y
Sbjct: 274 MTILSSRDHTCVHPEVV-GNFNRNEKCMELLDGKHGKSCYFY 314
>UNIPROTKB|J3QSE8 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
EMBL:AC002994 EMBL:AC005969 EMBL:AC060798 HGNC:HGNC:20473
ProteinModelPortal:J3QSE8 Ensembl:ENST00000577598 Uniprot:J3QSE8
Length = 994
Score = 214 (80.4 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 38/80 (47%), Positives = 56/80 (70%)
Query: 73 RKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLE 132
++ R ++ + L+FWCLN + FSDI ++++LTSGTL+P+ SF SELG F I+LE
Sbjct: 578 KRSRQKTAV-HVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSSELGVTFTIQLE 636
Query: 133 ANHVIDKDQVFIGVLGQGQK 152
ANH+I QV++G +G G K
Sbjct: 637 ANHIIKNSQVWVGTIGSGPK 656
Score = 85 (35.0 bits), Expect = 2.3e-22, Sum P(2) = 2.3e-22
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETE-GESNRWYRKDRTPMRGIEPVVSQGP 59
MTILSSR HTC++ EV+ N N+ C EL + + G+S +Y G+ + Q
Sbjct: 273 MTILSSRDHTCVHPEVV-GNFNRNEKCMELLDGKNGKSCYFYH-------GVHKISDQ-- 322
Query: 60 HA-DEYQGESNRW 71
H +QG W
Sbjct: 323 HTLQTFQGMCKAW 335
>UNIPROTKB|Q9BX63 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=NAS] [GO:0003677 "DNA binding" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000077 "DNA damage checkpoint"
evidence=NAS] [GO:0006302 "double-strand break repair"
evidence=NAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=IDA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737
GO:GO:0000077 GO:GO:0046872 GO:GO:0003677 GO:GO:0031965
GO:GO:0006357 GO:GO:0051539 GO:GO:0004003 GO:GO:0006302 MIM:114480
InterPro:IPR014001 SMART:SM00487 CleanEx:HS_BACH1 Orphanet:145
PDB:1T29 PDBsum:1T29 MIM:227650 Orphanet:84 eggNOG:COG1199
TIGRFAMs:TIGR00604 CTD:83990 HOGENOM:HOG000068083
HOVERGEN:HBG081519 KO:K15362 OrthoDB:EOG4J6RQ8 EMBL:AF360549
EMBL:AC002994 EMBL:AC005969 EMBL:AC060798 EMBL:BC101472
EMBL:BC101474 EMBL:AK074713 IPI:IPI00012500 IPI:IPI00514398
RefSeq:NP_114432.2 UniGene:Hs.128903 PDB:3AL3 PDBsum:3AL3
ProteinModelPortal:Q9BX63 SMR:Q9BX63 DIP:DIP-41787N IntAct:Q9BX63
MINT:MINT-275883 STRING:Q9BX63 PhosphoSite:Q9BX63 DMDM:57012613
PaxDb:Q9BX63 PRIDE:Q9BX63 DNASU:83990 Ensembl:ENST00000259008
GeneID:83990 KEGG:hsa:83990 UCSC:uc002izk.2 GeneCards:GC17M059759
H-InvDB:HIX0202529 HGNC:HGNC:20473 HPA:HPA005474 MIM:605882
MIM:609054 neXtProt:NX_Q9BX63 PharmGKB:PA134906421
InParanoid:Q9BX63 EvolutionaryTrace:Q9BX63 GenomeRNAi:83990
NextBio:73148 ArrayExpress:Q9BX63 Bgee:Q9BX63 CleanEx:HS_BRIP1
Genevestigator:Q9BX63 GermOnline:ENSG00000136492 Uniprot:Q9BX63
Length = 1249
Score = 214 (80.4 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 38/80 (47%), Positives = 56/80 (70%)
Query: 73 RKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLE 132
++ R ++ + L+FWCLN + FSDI ++++LTSGTL+P+ SF SELG F I+LE
Sbjct: 578 KRSRQKTAV-HVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFSSELGVTFTIQLE 636
Query: 133 ANHVIDKDQVFIGVLGQGQK 152
ANH+I QV++G +G G K
Sbjct: 637 ANHIIKNSQVWVGTIGSGPK 656
Score = 85 (35.0 bits), Expect = 4.2e-22, Sum P(2) = 4.2e-22
Identities = 26/73 (35%), Positives = 37/73 (50%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETE-GESNRWYRKDRTPMRGIEPVVSQGP 59
MTILSSR HTC++ EV+ N N+ C EL + + G+S +Y G+ + Q
Sbjct: 273 MTILSSRDHTCVHPEVV-GNFNRNEKCMELLDGKNGKSCYFYH-------GVHKISDQ-- 322
Query: 60 HA-DEYQGESNRW 71
H +QG W
Sbjct: 323 HTLQTFQGMCKAW 335
>UNIPROTKB|J9NVZ8 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:AAEX03006594 EMBL:AAEX03006595
EMBL:AAEX03006596 Ensembl:ENSCAFT00000045493 Uniprot:J9NVZ8
Length = 1214
Score = 214 (80.4 bits), Expect = 5.0e-22, Sum P(2) = 5.0e-22
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 69 NRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP 128
N+ + + +T + + L+FWCLN + FSDI +++LTSGTL+P+ SF SELG F
Sbjct: 575 NKKHLRQKTAVHV---LNFWCLNPAVAFSDINGKVLTIVLTSGTLSPMKSFSSELGVTFT 631
Query: 129 IKLEANHVIDKDQVFIGVLGQGQK 152
I+LEANHVI+ QV++G +G G K
Sbjct: 632 IQLEANHVINNSQVWVGTIGSGPK 655
Score = 84 (34.6 bits), Expect = 5.0e-22, Sum P(2) = 5.0e-22
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETE-GESNRWY 41
MTILSSR HTC++ EV+ N N+ C EL + + G+S +Y
Sbjct: 272 MTILSSRDHTCVHPEVV-GNFNRNEKCMELLDGKNGKSCYFY 312
>UNIPROTKB|E2RHN5 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 OMA:GVHKISD EMBL:AAEX03006594
EMBL:AAEX03006595 EMBL:AAEX03006596 Ensembl:ENSCAFT00000028135
Uniprot:E2RHN5
Length = 1244
Score = 214 (80.4 bits), Expect = 5.3e-22, Sum P(2) = 5.3e-22
Identities = 40/84 (47%), Positives = 58/84 (69%)
Query: 69 NRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFP 128
N+ + + +T + + L+FWCLN + FSDI +++LTSGTL+P+ SF SELG F
Sbjct: 576 NKKHLRQKTAVHV---LNFWCLNPAVAFSDINGKVLTIVLTSGTLSPMKSFSSELGVTFT 632
Query: 129 IKLEANHVIDKDQVFIGVLGQGQK 152
I+LEANHVI+ QV++G +G G K
Sbjct: 633 IQLEANHVINNSQVWVGTIGSGPK 656
Score = 84 (34.6 bits), Expect = 5.3e-22, Sum P(2) = 5.3e-22
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETE-GESNRWY 41
MTILSSR HTC++ EV+ N N+ C EL + + G+S +Y
Sbjct: 273 MTILSSRDHTCVHPEVV-GNFNRNEKCMELLDGKNGKSCYFY 313
>MGI|MGI:2442836 [details] [associations]
symbol:Brip1 "BRCA1 interacting protein C-terminal helicase
1" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 MGI:MGI:2442836
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0006281 GO:GO:0006357
GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
CleanEx:MM_BACH1 eggNOG:COG1199 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 CTD:83990 HOGENOM:HOG000068083
HOVERGEN:HBG081519 KO:K15362 OrthoDB:EOG4J6RQ8 EMBL:AL592465
EMBL:AL592065 EMBL:AL645690 EMBL:BC094252 EMBL:AK051878
EMBL:AK080771 IPI:IPI00319607 RefSeq:NP_840094.1 UniGene:Mm.186143
ProteinModelPortal:Q5SXJ3 SMR:Q5SXJ3 STRING:Q5SXJ3
PhosphoSite:Q5SXJ3 PRIDE:Q5SXJ3 Ensembl:ENSMUST00000044423
GeneID:237911 KEGG:mmu:237911 UCSC:uc007ksf.2 InParanoid:Q5SXJ3
OMA:GVHKISD ChiTaRS:BRIP1 NextBio:383570 Bgee:Q5SXJ3
CleanEx:MM_BRIP1 Genevestigator:Q5SXJ3
GermOnline:ENSMUSG00000034329 Uniprot:Q5SXJ3
Length = 1174
Score = 220 (82.5 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
Identities = 39/68 (57%), Positives = 51/68 (75%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+FWCLN + FSDI + R+++LTSGTL+P+ SF SELG F I+LEANHVI QV++
Sbjct: 592 LNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVISNSQVWV 651
Query: 145 GVLGQGQK 152
G +G G K
Sbjct: 652 GTVGSGPK 659
Score = 77 (32.2 bits), Expect = 5.7e-22, Sum P(2) = 5.7e-22
Identities = 24/72 (33%), Positives = 36/72 (50%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETE-GESNRWYRKDRTPMRGIEPVVSQGP 59
MTILSSR H+C++ EV+ N + C EL + + G+S +Y G+ + +Q
Sbjct: 276 MTILSSRDHSCVHPEVV-GNFNRKEKCMELLDGKHGKSCYFYH-------GVHKISNQQT 327
Query: 60 HADEYQGESNRW 71
QG S W
Sbjct: 328 -LQHLQGMSRAW 338
>UNIPROTKB|G3N0I3 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
EMBL:DAAA02048371 Ensembl:ENSBTAT00000065712 Uniprot:G3N0I3
Length = 756
Score = 210 (79.0 bits), Expect = 7.1e-22, Sum P(2) = 7.1e-22
Identities = 38/68 (55%), Positives = 50/68 (73%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+FWCLN + FSDI +++LTSGTL+P+ SF SELG F I+LEANHVI+ QV++
Sbjct: 450 LNFWCLNPAVAFSDINGKVWAIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWV 509
Query: 145 GVLGQGQK 152
G +G G K
Sbjct: 510 GTIGSGPK 517
Score = 81 (33.6 bits), Expect = 7.1e-22, Sum P(2) = 7.1e-22
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQEL 30
MTILSSR HTC++ EV+ N N+ C EL
Sbjct: 209 MTILSSRDHTCVHPEVM-GNFNRNEKCMEL 237
>UNIPROTKB|E1BNG9 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:DAAA02048371 IPI:IPI00923893
Ensembl:ENSBTAT00000048969 Uniprot:E1BNG9
Length = 1098
Score = 210 (79.0 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 38/68 (55%), Positives = 50/68 (73%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+FWCLN + FSDI +++LTSGTL+P+ SF SELG F I+LEANHVI+ QV++
Sbjct: 524 LNFWCLNPAVAFSDINGKVWAIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWV 583
Query: 145 GVLGQGQK 152
G +G G K
Sbjct: 584 GTIGSGPK 591
Score = 85 (35.0 bits), Expect = 8.0e-22, Sum P(2) = 8.0e-22
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETE-GESNRWY 41
MTILSSR HTC++ EV+ N N+ C EL + + G+S +Y
Sbjct: 209 MTILSSRDHTCVHPEVM-GNFNRNEKCMELLDGKNGKSCYFY 249
>UNIPROTKB|F1MMS0 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006357
GO:GO:0004003 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
OMA:GVHKISD EMBL:DAAA02048371 IPI:IPI00923893
Ensembl:ENSBTAT00000061499 Uniprot:F1MMS0
Length = 1164
Score = 210 (79.0 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
Identities = 38/68 (55%), Positives = 50/68 (73%)
Query: 85 LHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFI 144
L+FWCLN + FSDI +++LTSGTL+P+ SF SELG F I+LEANHVI+ QV++
Sbjct: 524 LNFWCLNPAVAFSDINGKVWAIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWV 583
Query: 145 GVLGQGQK 152
G +G G K
Sbjct: 584 GTIGSGPK 591
Score = 85 (35.0 bits), Expect = 9.3e-22, Sum P(2) = 9.3e-22
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKETE-GESNRWY 41
MTILSSR HTC++ EV+ N N+ C EL + + G+S +Y
Sbjct: 209 MTILSSRDHTCVHPEVM-GNFNRNEKCMELLDGKNGKSCYFY 249
>UNIPROTKB|I3LBL1 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 PROSITE:PS51193
GO:GO:0005524 GO:GO:0005737 GO:GO:0003677 GO:GO:0006357
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
GeneTree:ENSGT00530000063199 EMBL:CU914462 EMBL:CU694840
Ensembl:ENSSSCT00000025154 OMA:TEAWDIE Uniprot:I3LBL1
Length = 709
Score = 209 (78.6 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 40/78 (51%), Positives = 52/78 (66%)
Query: 74 KDRTPMSIKY-TLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLE 132
K R P L+FWCLN + FSDI +++LTSGTL+P+ SF SELG F I+LE
Sbjct: 582 KKRLPQKTAVRVLNFWCLNPAVAFSDINGKVWNIVLTSGTLSPMKSFSSELGVTFTIQLE 641
Query: 133 ANHVIDKDQVFIGVLGQG 150
ANHVI+ QV++G +G G
Sbjct: 642 ANHVINNSQVWVGTIGSG 659
Score = 74 (31.1 bits), Expect = 4.0e-21, Sum P(2) = 4.0e-21
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQELKE-TEGES 37
MTILSSR HTC++ EV+ N + C EL + G+S
Sbjct: 278 MTILSSRDHTCVHPEVV-GNFNRKENCMELLDGRNGKS 314
>TAIR|locus:2030497 [details] [associations]
symbol:AT1G20720 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 EMBL:CP002684 GO:GO:0005739 GO:GO:0005524
GO:GO:0003677 GO:GO:0004003 KO:K15362 OMA:EKELDDS IPI:IPI00524588
RefSeq:NP_173495.5 UniGene:At.51696 ProteinModelPortal:F4HUN4
SMR:F4HUN4 PRIDE:F4HUN4 EnsemblPlants:AT1G20720.1 GeneID:838662
KEGG:ath:AT1G20720 Uniprot:F4HUN4
Length = 1175
Score = 205 (77.2 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 47/115 (40%), Positives = 64/115 (55%)
Query: 58 GPHADEYQGESNRWYRKDRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVD 117
G H +YQ R ++ + +T WC+N +VF D+ + + SVILTSGTL+P++
Sbjct: 437 GSHILDYQLGLQRSTKRGDPSGTWTHTFSLWCMNPAVVFKDLADISLSVILTSGTLSPMN 496
Query: 118 SFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFIGVLGQGPQNIPLQALYK 172
SF SELG QF LEA HVID + +V+ G + GP N PL A YK
Sbjct: 497 SFSSELGMQFGTSLEAPHVIDPNM----------QVWAGAISNGPSNYPLNASYK 541
Score = 75 (31.5 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQEL 30
M +L+SRKH C N VL K+N++D C+ L
Sbjct: 177 MAVLASRKHYCTNRHVL-GKDNVDDECRLL 205
>TAIR|locus:2016209 [details] [associations]
symbol:AT1G79950 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] InterPro:IPR003822 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020 EMBL:CP002684
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
TIGRFAMs:TIGR00604 Gene3D:1.20.1160.11 SUPFAM:SSF47762 KO:K11136
OMA:PFPPLKD IPI:IPI00530732 RefSeq:NP_178113.3 UniGene:At.34013
ProteinModelPortal:F4HQE2 SMR:F4HQE2 PRIDE:F4HQE2
EnsemblPlants:AT1G79950.1 GeneID:844335 KEGG:ath:AT1G79950
ArrayExpress:F4HQE2 Uniprot:F4HQE2
Length = 1040
Score = 171 (65.3 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 37/99 (37%), Positives = 55/99 (55%)
Query: 60 HADEYQGESNRWYRKDRTPMS--IKYTLHFWCLNSGLVFSDI-RESARSVILTSGTLAPV 116
HAD Y+ + M + TL +WC + G+ DI ++ S+ILTSGTL+P+
Sbjct: 436 HADVYRVHVQELEQNSTDVMKGKVSRTLSWWCFSPGITMLDIAQKGVGSIILTSGTLSPM 495
Query: 117 DSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQGQKVFI 155
DS EL FPI+LE HVI +Q++ GV+ G ++
Sbjct: 496 DSLAQELKLDFPIRLENPHVISSNQLWAGVVSTGPSGYV 534
Score = 65 (27.9 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 1 MTILSSRKHTCINDEV--LKAKENINDLCQELKETEG--ESNRWYR-KD---RTPMRGIE 52
M +L SR+ C+N+EV L+ K + + CQ L + G + N + R D P G E
Sbjct: 171 MVVLGSREQLCVNEEVNSLRGKA-LTNACQYLCKKRGKRQCNHFNRLPDYLKHNPHIGDE 229
Query: 53 PV 54
PV
Sbjct: 230 PV 231
>UNIPROTKB|Q5RE34 [details] [associations]
symbol:RTEL1 "Regulator of telomere elongation helicase 1"
species:9601 "Pongo abelii" [GO:0000723 "telomere maintenance"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0010569 "regulation of double-strand
break repair via homologous recombination" evidence=ISS]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 GO:GO:0000723
GO:GO:0010569 TIGRFAMs:TIGR00604 KO:K11136 CTD:51750 EMBL:CR857704
RefSeq:NP_001124929.1 UniGene:Pab.2365 ProteinModelPortal:Q5RE34
GeneID:100171800 KEGG:pon:100171800 Uniprot:Q5RE34
Length = 1302
Score = 174 (66.3 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + GL + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 454 LSYWCFSPGLSMRELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 513
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 514 VGVVPRG 520
Score = 49 (22.3 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 3 ILSSRKHTCINDEVLKAKEN-IN-DLCQELKETEGESNRWY 41
+L SR+ CI+ EV K + N I LC+ K+ S +Y
Sbjct: 138 VLGSREQLCIHPEVKKQESNHIQIHLCR--KKVASRSCHFY 176
>UNIPROTKB|E1BTS7 [details] [associations]
symbol:Gga.49055 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:AADN02019151 EMBL:AADN02019152
EMBL:AADN02019153 IPI:IPI00819960 Ensembl:ENSGALT00000039433
ArrayExpress:E1BTS7 Uniprot:E1BTS7
Length = 1085
Score = 168 (64.2 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 36/91 (39%), Positives = 58/91 (63%)
Query: 68 SNRWYRKDRTPM----SIKY---TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSF 119
SN+ +K+RT + + K TL +WC + G + +R+ R++ILTSGTL+P+ SF
Sbjct: 431 SNQKKKKERTDLWDSSAAKKQGKTLSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSF 490
Query: 120 QSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
E+ FP+ LE HVIDK Q+++G++ +G
Sbjct: 491 TMEMQIPFPVLLENPHVIDKRQLWVGIIPKG 521
Score = 50 (22.7 bits), Expect = 9.2e-14, Sum P(2) = 9.2e-14
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 3 ILSSRKHTCINDEVLKAKENINDLCQELKETEGESNRWYR--KDRTPMRGI 51
+L SR+ CIN EV + + N + K+ + +Y ++++ +G+
Sbjct: 137 VLGSREQLCINPEVKRQESNHMQIYMCRKKVMARACHFYNNVEEKSTEKGL 187
>UNIPROTKB|E1BTS6 [details] [associations]
symbol:Gga.49055 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:AADN02019151 EMBL:AADN02019152
EMBL:AADN02019153 IPI:IPI00822587 Ensembl:ENSGALT00000039434
ArrayExpress:E1BTS6 Uniprot:E1BTS6
Length = 1124
Score = 168 (64.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 36/91 (39%), Positives = 58/91 (63%)
Query: 68 SNRWYRKDRTPM----SIKY---TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSF 119
SN+ +K+RT + + K TL +WC + G + +R+ R++ILTSGTL+P+ SF
Sbjct: 431 SNQKKKKERTDLWDSSAAKKQGKTLSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSF 490
Query: 120 QSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
E+ FP+ LE HVIDK Q+++G++ +G
Sbjct: 491 TMEMQIPFPVLLENPHVIDKRQLWVGIIPKG 521
Score = 50 (22.7 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 3 ILSSRKHTCINDEVLKAKENINDLCQELKETEGESNRWYR--KDRTPMRGI 51
+L SR+ CIN EV + + N + K+ + +Y ++++ +G+
Sbjct: 137 VLGSREQLCINPEVKRQESNHMQIYMCRKKVMARACHFYNNVEEKSTEKGL 187
>UNIPROTKB|F1NE49 [details] [associations]
symbol:Gga.49055 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 GO:GO:0000723
TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199 OMA:VLKMQFL
EMBL:AADN02019151 EMBL:AADN02019152 EMBL:AADN02019153
IPI:IPI00597328 Ensembl:ENSGALT00000009881 ArrayExpress:F1NE49
Uniprot:F1NE49
Length = 1127
Score = 168 (64.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 36/91 (39%), Positives = 58/91 (63%)
Query: 68 SNRWYRKDRTPM----SIKY---TLHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSF 119
SN+ +K+RT + + K TL +WC + G + +R+ R++ILTSGTL+P+ SF
Sbjct: 433 SNQKKKKERTDLWDSSAAKKQGKTLSYWCFSPGYSMHELVRQGVRTIILTSGTLSPLSSF 492
Query: 120 QSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
E+ FP+ LE HVIDK Q+++G++ +G
Sbjct: 493 TMEMQIPFPVLLENPHVIDKRQLWVGIIPKG 523
Score = 50 (22.7 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 3 ILSSRKHTCINDEVLKAKENINDLCQELKETEGESNRWYR--KDRTPMRGI 51
+L SR+ CIN EV + + N + K+ + +Y ++++ +G+
Sbjct: 139 VLGSREQLCINPEVKRQESNHMQIYMCRKKVMARACHFYNNVEEKSTEKGL 189
>UNIPROTKB|D6RA96 [details] [associations]
symbol:RTEL1-TNFRSF6B "Protein RTEL1-TNFRSF6B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 GO:GO:0005524
GO:GO:0003677 GO:GO:0004003 EMBL:AL121845 EMBL:AL353715
HOGENOM:HOG000007558 ProteinModelPortal:D6RA96 SMR:D6RA96
Ensembl:ENST00000492259 HGNC:HGNC:44095 ArrayExpress:D6RA96
Bgee:D6RA96 Uniprot:D6RA96
Length = 785
Score = 167 (63.8 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 481 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 540
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 541 VGVVPRG 547
Score = 47 (21.6 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 3 ILSSRKHTCINDEVLKAKEN 22
+L SR+ CI+ EV K + N
Sbjct: 137 VLGSREQLCIHPEVKKQESN 156
>ZFIN|ZDB-GENE-050306-11 [details] [associations]
symbol:rtel1 "regulator of telomere elongation
helicase 1" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
ZFIN:ZDB-GENE-050306-11 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 KO:K11136 CTD:51750 EMBL:BX004876
IPI:IPI01016862 RefSeq:NP_001013328.2 UniGene:Dr.87074
ProteinModelPortal:F1QNW3 Ensembl:ENSDART00000123445 GeneID:503732
KEGG:dre:503732 NextBio:20866277 Bgee:F1QNW3 Uniprot:F1QNW3
Length = 1177
Score = 163 (62.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 85 LHFWCLNSGLVFSDI-RESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G ++ R+ R +ILTSGTL+P+ SF E+ FP+ LE HVI +DQ+F
Sbjct: 452 LSYWCFSPGFSMQELLRQEVRCIILTSGTLSPLSSFTCEMQIPFPVSLENPHVIQRDQIF 511
Query: 144 IGVLGQG 150
+ ++ +G
Sbjct: 512 VSIIEKG 518
Score = 53 (23.7 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 9/20 (45%), Positives = 14/20 (70%)
Query: 3 ILSSRKHTCINDEVLKAKEN 22
+L SR+ CIN EV++ + N
Sbjct: 137 VLGSREQLCINQEVMRHESN 156
>WB|WBGene00001049 [details] [associations]
symbol:dog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0043570
"maintenance of DNA repeat elements" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0000723 "telomere maintenance"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI;IMP] [GO:0090329 "regulation of DNA-dependent DNA
replication" evidence=IGI;IMP] InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 GO:GO:0005524
GO:GO:0003677 GO:GO:0000003 GO:GO:0004003 GO:GO:0000723
GO:GO:0006289 GO:GO:0043570 eggNOG:COG1199
GeneTree:ENSGT00530000063199 GO:GO:0090329 KO:K15362 EMBL:Z81526
PIR:T21711 RefSeq:NP_493618.1 ProteinModelPortal:O62217 SMR:O62217
STRING:O62217 PaxDb:O62217 EnsemblMetazoa:F33H2.1.1
EnsemblMetazoa:F33H2.1.2 GeneID:173370 KEGG:cel:CELE_F33H2.1
UCSC:F33H2.1 CTD:173370 WormBase:F33H2.1 HOGENOM:HOG000021716
InParanoid:O62217 OMA:EKELDDS NextBio:879367 Uniprot:O62217
Length = 983
Score = 157 (60.3 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 82 KYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ 141
K T+ WC++ L F D RS++L SGTL P+D+ ++ELG +F ++E + VI+KD
Sbjct: 659 KTTISLWCMSPALSFFDAFNETRSIVLASGTLCPMDTLKTELGMEFKQQVEGDQVINKDN 718
Query: 142 VFIGVLGQG 150
+F VL G
Sbjct: 719 IFAAVLPIG 727
Score = 55 (24.4 bits), Expect = 3.1e-13, Sum P(2) = 3.1e-13
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 2 TILSSRKHTCINDEVLKAKENINDLCQEL 30
TIL+SR+ +CIN K + I+ C+E+
Sbjct: 269 TILASREQSCINPAARKHAD-ISQYCKEV 296
>UNIPROTKB|Q9NZ71 [details] [associations]
symbol:RTEL1 "Regulator of telomere elongation helicase 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IMP] [GO:0000723 "telomere maintenance"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IMP] [GO:0010569 "regulation of double-strand
break repair via homologous recombination" evidence=IMP]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 EMBL:CH471077 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0051539 GO:GO:0004003
EMBL:AF217796 GO:GO:0000723 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 EMBL:AL353715 KO:K11136 CTD:51750
OrthoDB:EOG412M4Q EMBL:AF217795 EMBL:AB029011 EMBL:AK000485
EMBL:AK302508 EMBL:AK299332 EMBL:AK304798 EMBL:AL080127
IPI:IPI00219849 IPI:IPI00413900 IPI:IPI00718800 IPI:IPI00745153
IPI:IPI00929254 IPI:IPI00929311 IPI:IPI00929712 IPI:IPI00929751
PIR:T12516 PIR:T45294 RefSeq:NP_057518.1 RefSeq:NP_116575.3
UniGene:Hs.434878 ProteinModelPortal:Q9NZ71 SMR:Q9NZ71
IntAct:Q9NZ71 STRING:Q9NZ71 PhosphoSite:Q9NZ71 DMDM:229462743
PaxDb:Q9NZ71 PRIDE:Q9NZ71 GeneID:51750 KEGG:hsa:51750
UCSC:uc002yfu.2 UCSC:uc002yfx.1 UCSC:uc011abd.2 UCSC:uc021wge.1
GeneCards:GC20P062289 HGNC:HGNC:15888 MIM:608833 neXtProt:NX_Q9NZ71
PharmGKB:PA134915625 HOVERGEN:HBG108423 InParanoid:Q9NZ71
GenomeRNAi:51750 NextBio:55835 ArrayExpress:Q9NZ71 Bgee:Q9NZ71
Genevestigator:Q9NZ71 GermOnline:ENSG00000026036 Uniprot:Q9NZ71
Length = 1219
Score = 167 (63.8 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
Score = 47 (21.6 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 3 ILSSRKHTCINDEVLKAKEN 22
+L SR+ CI+ EV K + N
Sbjct: 137 VLGSREQLCIHPEVKKQESN 156
>UNIPROTKB|F6WH68 [details] [associations]
symbol:RTEL1 "Protein RTEL1-TNFRSF6B" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 EMBL:AL121845
TIGRFAMs:TIGR00604 EMBL:AL353715 HGNC:HGNC:15888 OMA:VLKMQFL
HGNC:HGNC:44095 IPI:IPI01021192 SMR:F6WH68 Ensembl:ENST00000318100
Ensembl:ENST00000482936 Uniprot:F6WH68
Length = 1400
Score = 167 (63.8 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ RS+ILTSGTLAPV SF E+ FP+ LE H+IDK Q++
Sbjct: 453 LSYWCFSPGHSMHELVRQGVRSLILTSGTLAPVSSFALEMQIPFPVCLENPHIIDKHQIW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVVPRG 519
Score = 47 (21.6 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 3 ILSSRKHTCINDEVLKAKEN 22
+L SR+ CI+ EV K + N
Sbjct: 137 VLGSREQLCIHPEVKKQESN 156
>UNIPROTKB|F1MWN6 [details] [associations]
symbol:RTEL1 "Regulator of telomere elongation helicase 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 IPI:IPI00905335 EMBL:DAAA02036222
Ensembl:ENSBTAT00000052120 OMA:THEKEDE Uniprot:F1MWN6
Length = 564
Score = 153 (58.9 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTLAP+ SF E+ FP+ LE HVI++ Q++
Sbjct: 320 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQIW 379
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 380 VGVIPKG 386
Score = 47 (21.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 3 ILSSRKHTCINDEVLKAKEN 22
+L SR+ CI+ EV K + N
Sbjct: 5 VLGSREQLCIHPEVKKQESN 24
>UNIPROTKB|B0W9F4 [details] [associations]
symbol:CPIJ003765 "Regulator of telomere elongation
helicase 1 homolog" species:7176 "Culex quinquefasciatus"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0010569 "regulation of double-strand break repair
via homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
HOGENOM:HOG000007558 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
EMBL:DS231864 RefSeq:XP_001845338.1 ProteinModelPortal:B0W9F4
EnsemblMetazoa:CPIJ003765-RA GeneID:6035102
KEGG:cqu:CpipJ_CPIJ003765 VectorBase:CPIJ003765 PhylomeDB:B0W9F4
Uniprot:B0W9F4
Length = 978
Score = 154 (59.3 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 34/88 (38%), Positives = 50/88 (56%)
Query: 67 ESNRWYRKDRTPMSIKYT---LHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSE 122
+++ W + S+K ++FWC N G + +ARS+ILTSGTLAP+ SE
Sbjct: 443 QADGWTATKQLVPSVKANAKVINFWCFNPGFGMRQLLGRNARSIILTSGTLAPLKPLISE 502
Query: 123 LGTQFPIKLEANHVIDKDQVFIGVLGQG 150
L +KLE H+ID QV + ++GQG
Sbjct: 503 LDIPIAVKLENPHIIDGSQVCVKIVGQG 530
Score = 48 (22.0 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 3 ILSSRKHTCINDEVLKAKENI--NDLCQ 28
IL SR CI+ EV K + N +LC+
Sbjct: 151 ILGSRDQLCIHPEVAKEEGNAVKTNLCK 178
>UNIPROTKB|D4ACH4 [details] [associations]
symbol:Rtel1 "Regulator of telomere elongation helicase 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR006935 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF04851 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
IPI:IPI00781945 Ensembl:ENSRNOT00000029336 ArrayExpress:D4ACH4
Uniprot:D4ACH4
Length = 1165
Score = 152 (58.6 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 28/67 (41%), Positives = 46/67 (68%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + +++ R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSHSMRELVQQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVIPRG 519
Score = 51 (23.0 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 3 ILSSRKHTCINDEVLKAKENINDLCQELKETEGESNRWYR--KDR-------TPMRGIEP 53
+L SR+ CI+ EV K + N + K+ S +Y +++ TP+ IE
Sbjct: 137 VLGSREQLCIHPEVKKQESNHMQISLCRKKVASRSCHFYNNVEEKSLEQELATPILDIED 196
Query: 54 VVSQG 58
+V G
Sbjct: 197 LVKNG 201
>UNIPROTKB|E2RLA6 [details] [associations]
symbol:RTEL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 OMA:VLKMQFL EMBL:AAEX03014162
EMBL:AAEX03014163 Ensembl:ENSCAFT00000020689 Uniprot:E2RLA6
Length = 1232
Score = 153 (58.9 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G +++ R+VILTSGTLAPV SF E+ FP+ LE HVI + Q++
Sbjct: 452 LSYWCFSPGHSMRQLVQQGVRTVILTSGTLAPVSSFALEMQIPFPVCLENPHVIHQQQIW 511
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 512 VGIVSRG 518
Score = 50 (22.7 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 3 ILSSRKHTCINDEVLKAKENIND--LCQELKETEGESNRWYR--KDR-------TPMRGI 51
+L SR+ CI+ EV K + N LC+ K+ S +Y +++ TP+ I
Sbjct: 136 VLGSREQLCIHPEVKKQESNHMQIHLCR--KKVASRSCHFYNNVEEKSLEQELATPILDI 193
Query: 52 EPVVSQG 58
E +V G
Sbjct: 194 EDLVKSG 200
>RGD|1306721 [details] [associations]
symbol:Rtel1 "regulator of telomere elongation helicase 1"
species:10116 "Rattus norvegicus" [GO:0000723 "telomere
maintenance" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO;ISS]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0010569 "regulation of
double-strand break repair via homologous recombination"
evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR006935
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF04851 Pfam:PF06733
Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 RGD:1306721 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0000723 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 EMBL:CH474066
HOGENOM:HOG000007558 KO:K11136 CTD:51750 OrthoDB:EOG412M4Q
EMBL:BC086436 IPI:IPI00781945 IPI:IPI00782143 RefSeq:NP_001178786.1
UniGene:Rn.98315 PRIDE:Q5RJZ1 GeneID:362288 KEGG:rno:362288
UCSC:RGD:1306721 NextBio:679364 ArrayExpress:Q5RJZ1
Genevestigator:Q5RJZ1 Uniprot:Q5RJZ1
Length = 1274
Score = 152 (58.6 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 28/67 (41%), Positives = 46/67 (68%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + +++ R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSHSMRELVQQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 513 VGVIPRG 519
Score = 51 (23.0 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 18/65 (27%), Positives = 30/65 (46%)
Query: 3 ILSSRKHTCINDEVLKAKENINDLCQELKETEGESNRWYR--KDR-------TPMRGIEP 53
+L SR+ CI+ EV K + N + K+ S +Y +++ TP+ IE
Sbjct: 137 VLGSREQLCIHPEVKKQESNHMQISLCRKKVASRSCHFYNNVEEKSLEQELATPILDIED 196
Query: 54 VVSQG 58
+V G
Sbjct: 197 LVKNG 201
>UNIPROTKB|A4K436 [details] [associations]
symbol:RTEL1 "Regulator of telomere elongation helicase 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0000723 "telomere maintenance" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 GO:GO:0000723
GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
HOGENOM:HOG000007558 KO:K11136 EMBL:DQ323152 EMBL:DQ323153
EMBL:DQ420360 EMBL:DQ420361 EMBL:DQ420362 EMBL:DQ420363
IPI:IPI00840795 IPI:IPI00905335 IPI:IPI00930023 IPI:IPI00930030
IPI:IPI00930035 RefSeq:NP_001091044.1 UniGene:Bt.6256
ProteinModelPortal:A4K436 GeneID:505721 KEGG:bta:505721 CTD:51750
InParanoid:A4K434 OrthoDB:EOG412M4Q NextBio:20867282 Uniprot:A4K436
Length = 1216
Score = 153 (58.9 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + G + +R+ R++ILTSGTLAP+ SF E+ FP+ LE HVI++ Q++
Sbjct: 451 LSYWCFSPGHSMRELVRQGVRTLILTSGTLAPMASFSLEMQIPFPVCLENPHVINQHQIW 510
Query: 144 IGVLGQG 150
+GV+ +G
Sbjct: 511 VGVIPKG 517
Score = 47 (21.6 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 3 ILSSRKHTCINDEVLKAKEN 22
+L SR+ CI+ EV K + N
Sbjct: 136 VLGSREQLCIHPEVKKQESN 155
>UNIPROTKB|B4PZB4 [details] [associations]
symbol:GE16425 "Regulator of telomere elongation helicase 1
homolog" species:7245 "Drosophila yakuba" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CM000162 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_002099973.1
EnsemblMetazoa:FBtr0262943 GeneID:6524109 KEGG:dya:Dyak_GE16425
FlyBase:FBgn0233951 Uniprot:B4PZB4
Length = 985
Score = 143 (55.4 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 37/103 (35%), Positives = 53/103 (51%)
Query: 55 VSQGPHADEYQGESNR-WYRKDRTPM---SIKYT--LHFWCLNSGLVFSDIRES-ARSVI 107
V QG H + G+ + W K SIK ++FWC N G + + RSVI
Sbjct: 419 VKQG-HGKQQGGKQHGGWLGKGTIAAATGSIKVAKIINFWCFNPGFGMEQLLNTQVRSVI 477
Query: 108 LTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
LTSGTLAP+ +EL LE H++D+ QV++ ++G G
Sbjct: 478 LTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVYVKIIGTG 520
Score = 55 (24.4 bits), Expect = 9.2e-12, Sum P(2) = 9.2e-12
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 3 ILSSRKHTCINDEVLKAKENIN--DLCQ---ELKETEGESNRWYRKDRTPMRG 50
+L SR CI+ EV++ + N N ++C+ K + RKD +RG
Sbjct: 138 VLGSRDQLCIHPEVMREQGNSNKTNMCKLRVHSKTCSFQMRVESRKDHPDLRG 190
Score = 37 (18.1 bits), Expect = 6.7e-10, Sum P(2) = 6.7e-10
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 25 DLCQELKETEGESNRW 40
DL EL +T G +N W
Sbjct: 90 DL-SELAKTMGRANNW 104
>MGI|MGI:2139369 [details] [associations]
symbol:Rtel1 "regulator of telomere elongation helicase 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0010569 "regulation of double-strand break repair
via homologous recombination" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 MGI:MGI:2139369
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0051539 GO:GO:0004003
InterPro:IPR014001 SMART:SM00487 GO:GO:0000723 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
KO:K11136 CTD:51750 EMBL:AY481619 EMBL:AY481620 EMBL:AY481621
EMBL:AY481622 EMBL:AY481623 EMBL:AK173097 EMBL:AK145145
EMBL:AL928965 EMBL:BC105578 EMBL:BC144977 EMBL:BC144978
EMBL:BC145658 IPI:IPI00274165 IPI:IPI00467288 IPI:IPI00754466
IPI:IPI00756345 IPI:IPI00756903 IPI:IPI00929860
RefSeq:NP_001001882.3 RefSeq:NP_001160137.1 RefSeq:NP_001160138.1
RefSeq:NP_001160139.1 RefSeq:NP_001160140.1 UniGene:Mm.11333
ProteinModelPortal:Q0VGM9 SMR:Q0VGM9 STRING:Q0VGM9
PhosphoSite:Q0VGM9 PRIDE:Q0VGM9 Ensembl:ENSMUST00000048608
Ensembl:ENSMUST00000054622 Ensembl:ENSMUST00000098971
Ensembl:ENSMUST00000108814 Ensembl:ENSMUST00000108815
Ensembl:ENSMUST00000148252 GeneID:269400 KEGG:mmu:269400
UCSC:uc008olu.2 UCSC:uc008olv.2 UCSC:uc008olw.2 UCSC:uc008olx.2
UCSC:uc012cmk.1 UCSC:uc012cml.1 InParanoid:Q6H1L3 OMA:VLKMQFL
ChiTaRS:RTEL1 NextBio:392832 Bgee:Q0VGM9 Genevestigator:Q0VGM9
Uniprot:Q0VGM9
Length = 1203
Score = 147 (56.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E+ FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEMQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
Score = 52 (23.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 3 ILSSRKHTCINDEVLKAKENINDLCQELKETEGESNRWYR--------KD-RTPMRGIEP 53
+L SR+ CI+ EV K + N + K+ S +Y +D TP+ IE
Sbjct: 137 VLGSREQLCIHPEVKKQESNHMQISLCRKKVASRSCHFYNNVEAKFLEQDLATPILDIED 196
Query: 54 VVSQG 58
+V G
Sbjct: 197 LVKNG 201
>UNIPROTKB|Q7QEI1 [details] [associations]
symbol:AGAP000634 "Regulator of telomere elongation
helicase 1 homolog" species:7165 "Anopheles gambiae" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:AAAB01008847 HOGENOM:HOG000007558 KO:K11136 OrthoDB:EOG4S4MX7
RefSeq:XP_311162.5 GeneID:1272449 KEGG:aga:AgaP_AGAP000634
VectorBase:AGAP000634 CTD:1272449 PhylomeDB:Q7QEI1 Uniprot:Q7QEI1
Length = 991
Score = 146 (56.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 31/77 (40%), Positives = 45/77 (58%)
Query: 76 RTPM-SIKYTLHFWCLNSGLVFSDIRESA-RSVILTSGTLAPVDSFQSELGTQFPIKLEA 133
+ P+ S ++FWC N G + +S RS+ILTSGTLAP+ F SEL + LE
Sbjct: 445 KAPVKSTSKVINFWCFNPGFGMRQLVDSGTRSIILTSGTLAPLKPFISELSLPVAVSLEN 504
Query: 134 NHVIDKDQVFIGVLGQG 150
H+I + QV++ V+ G
Sbjct: 505 PHIIARSQVYVKVITHG 521
Score = 51 (23.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 3 ILSSRKHTCINDEVLKAKENI--NDLCQELKETEGES--NRWYR-KDR-----TPMRGIE 52
IL SR CI+ ++ K + N LC+E + S NR KDR P+ IE
Sbjct: 140 ILGSRDQLCIHPDISKQENNAIKTVLCRESVKARNCSFYNRVETAKDRPDVATVPVMDIE 199
Query: 53 PVVSQG 58
+V+ G
Sbjct: 200 DLVTVG 205
>UNIPROTKB|B4GU19 [details] [associations]
symbol:GL14463 "Regulator of telomere elongation helicase 1
homolog" species:7234 "Drosophila persimilis" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 TIGRFAMs:TIGR00604 KO:K11136
OrthoDB:EOG4S4MX7 EMBL:CH479190 RefSeq:XP_002022098.1
EnsemblMetazoa:FBtr0180078 GeneID:6596883 KEGG:dpe:Dper_GL14463
FlyBase:FBgn0152068 Uniprot:B4GU19
Length = 1009
Score = 142 (55.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 34/92 (36%), Positives = 48/92 (52%)
Query: 65 QGESNRWYRKDR---TPMSIKYT--LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDS 118
QG+ W K T S K ++FWC N G + + RSVILTSGTLAP+
Sbjct: 430 QGKQQGWLGKGNITTTGTSSKAAKIVNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP 489
Query: 119 FQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
+EL LE H++D+ QV++ ++G G
Sbjct: 490 LIAELAIPVAQHLENPHIVDQSQVYVKIIGTG 521
Score = 55 (24.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 3 ILSSRKHTCINDEVLKAKENIN--DLCQ 28
+L SR CI+ EV+K + N N +LC+
Sbjct: 138 VLGSRDQLCIHPEVMKEQGNSNKVNLCK 165
Score = 36 (17.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 25 DLCQELKETEGESNRW 40
DL EL T G++N W
Sbjct: 90 DL-SELAMTVGQANNW 104
>UNIPROTKB|Q29FS3 [details] [associations]
symbol:GA17940 "Regulator of telomere elongation helicase 1
homolog" species:46245 "Drosophila pseudoobscura pseudoobscura"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0010569 "regulation of double-strand break repair
via homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CH379065 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_001354453.2
GeneID:4814338 KEGG:dpo:Dpse_GA17940 FlyBase:FBgn0077949
InParanoid:Q29FS3 Uniprot:Q29FS3
Length = 1009
Score = 142 (55.0 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 34/92 (36%), Positives = 48/92 (52%)
Query: 65 QGESNRWYRKDR---TPMSIKYT--LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDS 118
QG+ W K T S K ++FWC N G + + RSVILTSGTLAP+
Sbjct: 430 QGKQQGWLGKGNITTTGTSSKAAKIVNFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKP 489
Query: 119 FQSELGTQFPIKLEANHVIDKDQVFIGVLGQG 150
+EL LE H++D+ QV++ ++G G
Sbjct: 490 LIAELAIPVAQHLENPHIVDQSQVYVKIIGTG 521
Score = 55 (24.4 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 3 ILSSRKHTCINDEVLKAKENIN--DLCQ 28
+L SR CI+ EV+K + N N +LC+
Sbjct: 138 VLGSRDQLCIHPEVMKEQGNSNKVNLCK 165
Score = 36 (17.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 25 DLCQELKETEGESNRW 40
DL EL T G++N W
Sbjct: 90 DL-SELAMTVGQANNW 104
>UNIPROTKB|Q16X92 [details] [associations]
symbol:AAEL008960 "Regulator of telomere elongation
helicase 1 homolog" species:7159 "Aedes aegypti" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CH477545 RefSeq:XP_001653621.1 UniGene:Aae.7622
ProteinModelPortal:Q16X92 PRIDE:Q16X92 EnsemblMetazoa:AAEL008960-RA
GeneID:5571306 KEGG:aag:AaeL_AAEL008960 VectorBase:AAEL008960
HOGENOM:HOG000007558 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
PhylomeDB:Q16X92 Uniprot:Q16X92
Length = 1010
Score = 148 (57.2 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 33/88 (37%), Positives = 49/88 (55%)
Query: 67 ESNRWYRKDRTPMSIKYT---LHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSE 122
+++ W + S+K + FWC N G + +ARS+ILTSGTLAP+ SE
Sbjct: 441 QADGWTATKQLVPSVKANAKVVSFWCFNPGFGMRQLLGRNARSIILTSGTLAPLKPLISE 500
Query: 123 LGTQFPIKLEANHVIDKDQVFIGVLGQG 150
L ++LE H+ID QV + ++GQG
Sbjct: 501 LDIPIAVRLENPHIIDGSQVCVKIVGQG 528
Score = 46 (21.3 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 3 ILSSRKHTCINDEVLKAKENIN--DLCQ 28
IL SR CI+ EV K + N +LC+
Sbjct: 149 ILGSRDQLCIHPEVSKEEGNSTKTNLCK 176
>UNIPROTKB|Q6H1L8 [details] [associations]
symbol:Rtel1 "Regulator of telomere elongation helicase 1"
species:10096 "Mus spretus" [GO:0000723 "telomere maintenance"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0010569 "regulation of double-strand
break repair via homologous recombination" evidence=ISS]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 MGI:MGI:2139369
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0051539 GO:GO:0004003
GO:GO:0000723 GO:GO:0010569 TIGRFAMs:TIGR00604 EMBL:AY481613
EMBL:AY481614 EMBL:AY481615 EMBL:AY481616 EMBL:AY481617
EMBL:AY530632 ProteinModelPortal:Q6H1L8 Uniprot:Q6H1L8
Length = 1203
Score = 143 (55.4 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 27/67 (40%), Positives = 44/67 (65%)
Query: 85 LHFWCLNSGLVFSD-IRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
L +WC + + + + R++ILTSGTLAP+ SF E FP+ LE H+IDK+Q++
Sbjct: 453 LSYWCFSPSQSMRELVCQGVRTLILTSGTLAPLSSFALEKQIPFPVCLENPHIIDKNQLW 512
Query: 144 IGVLGQG 150
+G++ +G
Sbjct: 513 VGIVPRG 519
Score = 52 (23.4 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 3 ILSSRKHTCINDEVLKAKENINDLCQELKETEGESNRWYR--------KD-RTPMRGIEP 53
+L SR+ CI+ EV K + N + K+ S +Y +D TP+ IE
Sbjct: 137 VLGSREQLCIHPEVKKQESNHMQISLCRKKVASRSCHFYNNVEAKFLEQDLATPILDIED 196
Query: 54 VVSQG 58
+V G
Sbjct: 197 LVKNG 201
>FB|FBgn0029798 [details] [associations]
symbol:CG4078 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0006289 "nucleotide-excision repair" evidence=ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 EMBL:AE014298 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 KO:K11136 OMA:PFPPLKD
OrthoDB:EOG4S4MX7 EMBL:BT021290 EMBL:EU217688 EMBL:EU217689
EMBL:EU217690 EMBL:EU217691 EMBL:EU217692 EMBL:EU217693
EMBL:EU217694 EMBL:EU217695 EMBL:EU217696 EMBL:EU217697
EMBL:EU217698 EMBL:EU217699 RefSeq:NP_572254.1 UniGene:Dm.11709
ProteinModelPortal:Q9W484 SMR:Q9W484 IntAct:Q9W484
MINT:MINT-4080348 PaxDb:Q9W484 PRIDE:Q9W484
EnsemblMetazoa:FBtr0070807 EnsemblMetazoa:FBtr0332398 GeneID:31497
KEGG:dme:Dmel_CG4078 UCSC:CG4078-RA FlyBase:FBgn0029798
InParanoid:Q9W484 PhylomeDB:Q9W484 GenomeRNAi:31497 NextBio:773915
Bgee:Q9W484 Uniprot:Q9W484
Length = 985
Score = 138 (53.6 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVY 513
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 514 VKIIGTG 520
Score = 55 (24.4 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 3 ILSSRKHTCINDEVLKAKENIN--DLCQ---ELKETEGESNRWYRKDRTPMRG 50
+L SR CI+ EV++ + N N ++C+ K + RKD +RG
Sbjct: 138 VLGSRDQLCIHPEVMREQGNSNKTNMCKLRVHSKTCSFQMRVESRKDHPDLRG 190
Score = 37 (18.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 25 DLCQELKETEGESNRW 40
DL EL +T G +N W
Sbjct: 90 DL-SELAKTMGRANNW 104
>UNIPROTKB|B3NSW1 [details] [associations]
symbol:GG18780 "Regulator of telomere elongation helicase 1
homolog" species:7220 "Drosophila erecta" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 TIGRFAMs:TIGR00604 EMBL:CH954180
KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_001977003.1
EnsemblMetazoa:FBtr0138834 GeneID:6550838 KEGG:der:Dere_GG18780
FlyBase:FBgn0110988 Uniprot:B3NSW1
Length = 985
Score = 138 (53.6 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVY 513
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 514 VKIIGTG 520
Score = 54 (24.1 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 3 ILSSRKHTCINDEVLKAKENIN--DLCQ---ELKETEGESNRWYRKDRTPMRG 50
+L SR CI+ EV++ + N N ++C+ K + RKD +RG
Sbjct: 138 VLGSRDQLCIHPEVMREQGNSNKTNMCKLRVHSKTCTFQMRVESRKDHPDLRG 190
>UNIPROTKB|B4I0K4 [details] [associations]
symbol:GM12432 "Regulator of telomere elongation helicase 1
homolog" species:7238 "Drosophila sechellia" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 EMBL:CH480819 GO:GO:0010569
TIGRFAMs:TIGR00604 KO:K11136 OrthoDB:EOG4S4MX7
RefSeq:XP_002036876.1 EnsemblMetazoa:FBtr0195417 GeneID:6612367
KEGG:dse:Dsec_GM12432 FlyBase:FBgn0167369 Uniprot:B4I0K4
Length = 966
Score = 138 (53.6 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 435 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVY 494
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 495 VKIIGTG 501
Score = 52 (23.4 bits), Expect = 6.0e-11, Sum P(2) = 6.0e-11
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 3 ILSSRKHTCINDEVLKAKENIN--DLCQ---ELKETEGESNRWYRKDRTPMRG 50
+L SR CI+ EV++ N N ++C+ K + RKD +RG
Sbjct: 138 VLGSRDQLCIHPEVMRELGNSNKTNMCKLRVHSKTCSFQMRVESRKDHPDLRG 190
Score = 37 (18.1 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 25 DLCQELKETEGESNRW 40
DL EL +T G +N W
Sbjct: 90 DL-SELAKTMGRANNW 104
>UNIPROTKB|B4NDG5 [details] [associations]
symbol:GK24923 "Regulator of telomere elongation helicase 1
homolog" species:7260 "Drosophila willistoni" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 EMBL:CH964239 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
RefSeq:XP_002071885.1 STRING:B4NDG5 EnsemblMetazoa:FBtr0255574
GeneID:6648559 KEGG:dwi:Dwil_GK24923 FlyBase:FBgn0226882
InParanoid:B4NDG5 Uniprot:B4NDG5
Length = 998
Score = 138 (53.6 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 460 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVY 519
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 520 VKIIGTG 526
Score = 50 (22.7 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 3 ILSSRKHTCINDEVLKAKENIN--DLCQ 28
+L SR CI+ EV++ + N N ++C+
Sbjct: 140 VLGSRDQLCIHPEVMREQGNSNKVNMCK 167
>UNIPROTKB|B4L1Z2 [details] [associations]
symbol:GI15901 "Regulator of telomere elongation helicase 1
homolog" species:7230 "Drosophila mojavensis" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0010569 TIGRFAMs:TIGR00604
EMBL:CH933810 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_002010396.1
EnsemblMetazoa:FBtr0166626 GeneID:6584754 KEGG:dmo:Dmoj_GI15901
FlyBase:FBgn0138650 InParanoid:B4L1Z2 Uniprot:B4L1Z2
Length = 1014
Score = 138 (53.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 455 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVY 514
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 515 VKIIGTG 521
Score = 50 (22.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 3 ILSSRKHTCINDEVLKAKENIN--DLCQ 28
+L SR CI+ +V+K + N N ++C+
Sbjct: 139 VLGSRDQLCIHPDVMKEQGNSNKVNMCK 166
>UNIPROTKB|B4M891 [details] [associations]
symbol:GJ16649 "Regulator of telomere elongation helicase 1
homolog" species:7244 "Drosophila virilis" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 EMBL:CH940653 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
RefSeq:XP_002056881.1 EnsemblMetazoa:FBtr0232574 GeneID:6633257
KEGG:dvi:Dvir_GJ16649 FlyBase:FBgn0203833 InParanoid:B4M891
Uniprot:B4M891
Length = 1005
Score = 139 (54.0 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 454 INFWCFNPGFGMEQLLNAHVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDRSQVY 513
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 514 VKIIGTG 520
Score = 47 (21.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 3 ILSSRKHTCINDEVLKAKENIN--DLCQ 28
+L SR CI+ +V++ + N N ++C+
Sbjct: 137 VLGSRDQLCIHPDVMREQGNSNKVNMCK 164
>UNIPROTKB|B3MSG8 [details] [associations]
symbol:GF20802 "Regulator of telomere elongation helicase 1
homolog" species:7217 "Drosophila ananassae" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CH902622 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_001964274.1
EnsemblMetazoa:FBtr0125502 GeneID:6503494 KEGG:dan:Dana_GF20802
FlyBase:FBgn0097808 InParanoid:B3MSG8 Uniprot:B3MSG8
Length = 994
Score = 138 (53.6 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 27/67 (40%), Positives = 40/67 (59%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++D+ QV+
Sbjct: 454 INFWCFNPGFGMEQLLNTQVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDQSQVY 513
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 514 VKIIGTG 520
Score = 43 (20.2 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 3 ILSSRKHTCINDEVLKAKENIN--DLCQ 28
+L SR CI+ EV + N N ++C+
Sbjct: 138 VLGSRDQLCIHPEVSREVGNSNKVNMCK 165
>DICTYBASE|DDB_G0286621 [details] [associations]
symbol:fncJ "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;IC] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR002464
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00491 dictyBase:DDB_G0286621 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0003677
EMBL:AAFI02000089 GO:GO:0004003 GO:GO:0006302 InterPro:IPR014001
SMART:SM00487 eggNOG:COG1199 TIGRFAMs:TIGR00604 KO:K15362
RefSeq:XP_637574.1 ProteinModelPortal:Q54LI7
EnsemblProtists:DDB0232367 GeneID:8625714 KEGG:ddi:DDB_G0286621
InParanoid:Q54LI7 Uniprot:Q54LI7
Length = 1078
Score = 138 (53.6 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 31/81 (38%), Positives = 45/81 (55%)
Query: 83 YTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQ- 141
Y W ++ + FS + ++ RSV+LTSGTL+P+ SF EL +FPI E ++ D Q
Sbjct: 781 YQFGIWAMSPRIAFSSLVQATRSVVLTSGTLSPLYSFPMELAAKFPISAEMGNLPDIAQR 840
Query: 142 VFIGVLGQGQKVFIGVLGQGP 162
+IG L G K + GP
Sbjct: 841 AWIGTLSHGVKGTKLICTHGP 861
Score = 42 (19.8 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 1 MTILSSRKHTCINDEVLKAKENINDLCQEL 30
M +L+SR CIN +LK + C++L
Sbjct: 455 MVVLASRDQYCINP-LLKDVPKKLEKCKKL 483
>UNIPROTKB|B4JNS2 [details] [associations]
symbol:GH24089 "Regulator of telomere elongation helicase 1
homolog" species:7222 "Drosophila grimshawi" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 EMBL:CH916371 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 KO:K11136 OMA:PFPPLKD
OrthoDB:EOG4S4MX7 RefSeq:XP_001992658.1 EnsemblMetazoa:FBtr0159503
GeneID:6565576 KEGG:dgr:Dgri_GH24089 FlyBase:FBgn0131545
InParanoid:B4JNS2 Uniprot:B4JNS2
Length = 986
Score = 131 (51.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 26/67 (38%), Positives = 40/67 (59%)
Query: 85 LHFWCLNSGLVFSDIRES-ARSVILTSGTLAPVDSFQSELGTQFPIKLEANHVIDKDQVF 143
++FWC N G + + RSVILTSGTLAP+ +EL LE H++++ QV+
Sbjct: 455 INFWCFNPGFGMEQLLNTHVRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVNEAQVY 514
Query: 144 IGVLGQG 150
+ ++G G
Sbjct: 515 VKIIGTG 521
Score = 47 (21.6 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 9/28 (32%), Positives = 18/28 (64%)
Query: 3 ILSSRKHTCINDEVLKAKENIN--DLCQ 28
+L SR CI+ +V++ + N N ++C+
Sbjct: 140 VLGSRDQLCIHPDVMREQGNSNKVNMCK 167
>UNIPROTKB|A8WS58 [details] [associations]
symbol:rtel-1 "Regulator of telomere elongation helicase 1
homolog" species:6238 "Caenorhabditis briggsae" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K11136 EMBL:HE601486 RefSeq:XP_002639805.1
EnsemblMetazoa:CBG02256 GeneID:8581799 KEGG:cbr:CBG02256
CTD:8581799 WormBase:CBG02256 HOGENOM:HOG000154218 OMA:ENDIENQ
Uniprot:A8WS58
Length = 994
Score = 101 (40.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 28/98 (28%), Positives = 50/98 (51%)
Query: 71 WYRKDRTPMSIKYTLHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPI 129
+ RKD + IKY +C + + ++ R+V+L SGTL+P+ +F +G F
Sbjct: 453 YIRKDSGKLVIKY----FCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGA 508
Query: 130 KLEANHVIDKDQVFIGVLGQGQKVFIGVLG--QGPQNI 165
LE H + + V ++ +G+ G++G Q +NI
Sbjct: 509 ILENEHALKQVPVLTSIVTRGKHG--GLVGSFQNRKNI 544
Score = 67 (28.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 2 TILSSRKHTCINDEVLKAKENIND--LCQELKETEGESNRWYRK 43
TIL SR+H CIN +V K KE+ +C+ L S +Y K
Sbjct: 133 TILGSREHFCINQKVKKIKESNRQAHVCRGL--VSKRSCHYYNK 174
>WB|WBGene00009124 [details] [associations]
symbol:rtel-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
EMBL:Z79754 KO:K11136 OMA:PFPPLKD HOGENOM:HOG000154218 EMBL:Z83224
PIR:T21356 RefSeq:NP_492769.1 ProteinModelPortal:Q93575 SMR:Q93575
IntAct:Q93575 MINT:MINT-227415 STRING:Q93575 PaxDb:Q93575
EnsemblMetazoa:F25H2.13.1 EnsemblMetazoa:F25H2.13.2 GeneID:172946
KEGG:cel:CELE_F25H2.13 UCSC:F25H2.13 CTD:172946 WormBase:F25H2.13
InParanoid:Q93575 NextBio:877635 Uniprot:Q93575
Length = 994
Score = 101 (40.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/83 (25%), Positives = 45/83 (54%)
Query: 71 WYRKDRTPMSIKYTLHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPI 129
+ +KD+ + K T+ ++C + + ++ R+V+L SGTL+P+ +F +G F
Sbjct: 453 YIQKDKD--NEKLTIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGA 510
Query: 130 KLEANHVIDKDQVFIGVLGQGQK 152
LE H + + V ++ +G++
Sbjct: 511 ILENEHALKQVPVLTSIVTRGKR 533
Score = 66 (28.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 2 TILSSRKHTCINDEVLKAKEN 22
TIL SR+H CIN +V K KE+
Sbjct: 133 TILGSREHFCINQKVKKIKES 153
>UNIPROTKB|Q93575 [details] [associations]
symbol:rtel-1 "Regulator of telomere elongation helicase 1
homolog" species:6239 "Caenorhabditis elegans" [GO:0005634
"nucleus" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=IGI] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199 EMBL:Z79754
KO:K11136 OMA:PFPPLKD HOGENOM:HOG000154218 EMBL:Z83224 PIR:T21356
RefSeq:NP_492769.1 ProteinModelPortal:Q93575 SMR:Q93575
IntAct:Q93575 MINT:MINT-227415 STRING:Q93575 PaxDb:Q93575
EnsemblMetazoa:F25H2.13.1 EnsemblMetazoa:F25H2.13.2 GeneID:172946
KEGG:cel:CELE_F25H2.13 UCSC:F25H2.13 CTD:172946 WormBase:F25H2.13
InParanoid:Q93575 NextBio:877635 Uniprot:Q93575
Length = 994
Score = 101 (40.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 21/83 (25%), Positives = 45/83 (54%)
Query: 71 WYRKDRTPMSIKYTLHFWCLNSGLVFSDIR-ESARSVILTSGTLAPVDSFQSELGTQFPI 129
+ +KD+ + K T+ ++C + + ++ R+V+L SGTL+P+ +F +G F
Sbjct: 453 YIQKDKD--NEKLTIKYFCFQASISMRMLKMRGVRNVLLASGTLSPIQAFTYNMGLNFGA 510
Query: 130 KLEANHVIDKDQVFIGVLGQGQK 152
LE H + + V ++ +G++
Sbjct: 511 ILENEHALKQVPVLTSIVTRGKR 533
Score = 66 (28.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 13/21 (61%), Positives = 16/21 (76%)
Query: 2 TILSSRKHTCINDEVLKAKEN 22
TIL SR+H CIN +V K KE+
Sbjct: 133 TILGSREHFCINQKVKKIKES 153
>MGI|MGI:95413 [details] [associations]
symbol:Ercc2 "excision repair cross-complementing rodent
repair deficiency, complementation group 2" species:10090 "Mus
musculus" [GO:0000075 "cell cycle checkpoint" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IMP] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005675 "holo TFIIH complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005819 "spindle" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=ISO]
[GO:0006289 "nucleotide-excision repair" evidence=ISO;IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006468 "protein phosphorylation"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0006917 "induction of apoptosis" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=ISO;IMP] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007568 "aging"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0009411 "response to UV" evidence=IMP] [GO:0009650 "UV
protection" evidence=ISO;IMP] [GO:0009791 "post-embryonic
development" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0021510 "spinal cord development" evidence=IMP]
[GO:0022405 "hair cycle process" evidence=IMP] [GO:0030198
"extracellular matrix organization" evidence=IMP] [GO:0030282 "bone
mineralization" evidence=IMP] [GO:0032289 "central nervous system
myelin formation" evidence=IMP] [GO:0033683 "nucleotide-excision
repair, DNA incision" evidence=ISO] [GO:0035264 "multicellular
organism growth" evidence=IMP] [GO:0035315 "hair cell
differentiation" evidence=ISO;IMP] [GO:0040016 "embryonic cleavage"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO] [GO:0043249 "erythrocyte maturation" evidence=IMP]
[GO:0043388 "positive regulation of DNA binding" evidence=IMP]
[GO:0043588 "skin development" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=ISO] [GO:0048820 "hair follicle maturation" evidence=IMP]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IMP] [GO:0071817
"MMXD complex" evidence=ISO] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 MGI:MGI:95413 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005737 GO:GO:0006915 GO:GO:0043066
GO:GO:0043588 GO:GO:0007059 GO:GO:0006979 GO:GO:0006917
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0007568
GO:GO:0001701 GO:GO:0001666 GO:GO:0045944 GO:GO:0030198
GO:GO:0040016 GO:GO:0051539 GO:GO:0006366 GO:GO:0009791
GO:GO:0060218 GO:GO:0004003 GO:GO:0035264 GO:GO:0071817
GO:GO:0021510 GO:GO:0030282 GO:GO:0000075 GO:GO:0043388
GO:GO:0008353 GO:GO:0009650 GO:GO:0005675 GO:GO:0019907
GO:GO:0006283 eggNOG:COG1199 TIGRFAMs:TIGR00604 GO:GO:0035315
GO:GO:0043139 GO:GO:0043249 EMBL:CH466639 HOGENOM:HOG000205390
KO:K10844 OMA:KDVDGKC CTD:2068 HOVERGEN:HBG051498 GO:GO:0033683
OrthoDB:EOG4BVRT2 GO:GO:0000441 GO:GO:0032289 GO:GO:0048820
EMBL:U97572 EMBL:AK004652 EMBL:AK082761 IPI:IPI00310721
RefSeq:NP_031975.2 UniGene:Mm.36524 ProteinModelPortal:O08811
SMR:O08811 STRING:O08811 PhosphoSite:O08811 PaxDb:O08811
PRIDE:O08811 Ensembl:ENSMUST00000062831 GeneID:13871 KEGG:mmu:13871
GeneTree:ENSGT00550000075092 InParanoid:Q8C487 NextBio:284788
Bgee:O08811 Genevestigator:O08811 GermOnline:ENSMUSG00000030400
Uniprot:O08811
Length = 760
Score = 106 (42.4 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEAN 134
DRTP LHF C+++ L + E +SVI+TSGTL+P+D + L P+ + A
Sbjct: 423 DRTPTIANPVLHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFH-PVTM-AT 480
Query: 135 HVIDKDQVFIG--VLGQGQ-KVFIGVLGQGPQNIPLQALYKNTLV 176
+ +V + ++G+G +V I + ++I + Y N L+
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLL 525
Score = 52 (23.4 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 4 LSSRKHTCINDEV--LKAKENINDLCQELKETEGESNRWYRKD 44
LSSRK+ CI+ EV L+ ++++ C L T Y++D
Sbjct: 109 LSSRKNLCIHPEVTPLRFGKDVDGKCHSL--TASYVRAQYQQD 149
>UNIPROTKB|F1N2P3 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9913 "Bos taurus" [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA] [GO:0048820 "hair follicle
maturation" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0043388 "positive regulation of DNA
binding" evidence=IEA] [GO:0043249 "erythrocyte maturation"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0035315 "hair cell differentiation" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0033683 "nucleotide-excision repair, DNA incision"
evidence=IEA] [GO:0032289 "central nervous system myelin formation"
evidence=IEA] [GO:0030282 "bone mineralization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021510 "spinal cord development" evidence=IEA] [GO:0019907
"cyclin-dependent protein kinase activating kinase holoenzyme
complex" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0009650 "UV protection" evidence=IEA] [GO:0008353
"RNA polymerase II carboxy-terminal domain kinase activity"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007568
"aging" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0000075 "cell cycle
checkpoint" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001945
InterPro:IPR002464 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737 GO:GO:0006915
GO:GO:0043066 GO:GO:0043588 GO:GO:0007059 GO:GO:0006979
GO:GO:0006917 GO:GO:0003677 GO:GO:0008283 GO:GO:0007568
GO:GO:0001701 GO:GO:0045944 GO:GO:0030198 GO:GO:0040016
GO:GO:0009791 GO:GO:0060218 GO:GO:0004003 GO:GO:0035264
GO:GO:0071817 GO:GO:0021510 GO:GO:0030282 GO:GO:0000075
GO:GO:0043388 GO:GO:0008353 GO:GO:0009650 GO:GO:0019907
GO:GO:0006283 TIGRFAMs:TIGR00604 GO:GO:0035315 GO:GO:0043139
GO:GO:0043249 OMA:KDVDGKC IPI:IPI00866827 GO:GO:0033683
GO:GO:0032289 GO:GO:0048820 GeneTree:ENSGT00550000075092
EMBL:DAAA02047375 Ensembl:ENSBTAT00000002680 Uniprot:F1N2P3
Length = 759
Score = 105 (42.0 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEAN 134
DRTP LHF C+++ L + E +SVI+TSGTL+P+D + L P+ + A
Sbjct: 422 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFH-PVTM-AT 479
Query: 135 HVIDKDQVFIG--VLGQGQ-KVFIGVLGQGPQNIPLQALYKNTLV 176
+ +V + ++G+G +V I + ++I + Y N L+
Sbjct: 480 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLL 524
Score = 53 (23.7 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 4 LSSRKHTCINDEV--LKAKENINDLCQELKETEGESNRWYRKD 44
LSSRK+ CI+ EV L+ ++++ C L T Y++D
Sbjct: 108 LSSRKNLCIHPEVTPLRFGKDVDGKCHSL--TASYVRAQYQRD 148
>UNIPROTKB|A6QLJ0 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9913 "Bos taurus" [GO:0006468
"protein phosphorylation" evidence=ISS] [GO:0008353 "RNA polymerase
II carboxy-terminal domain kinase activity" evidence=ISS]
[GO:0071817 "MMXD complex" evidence=ISS] [GO:0005819 "spindle"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] [GO:0005675 "holo TFIIH complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0035315 "hair cell differentiation" evidence=ISS] [GO:0004672
"protein kinase activity" evidence=ISS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0033683 "nucleotide-excision repair, DNA
incision" evidence=ISS] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0006979 "response to oxidative stress"
evidence=ISS] [GO:0000075 "cell cycle checkpoint" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR010643
InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777 Pfam:PF13307
PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737
GO:GO:0007059 GO:GO:0006979 GO:GO:0046872 GO:GO:0003677
GO:GO:0045944 GO:GO:0006468 GO:GO:0051539 GO:GO:0006366
GO:GO:0004003 GO:GO:0071817 GO:GO:0008022 GO:GO:0000075
GO:GO:0005675 eggNOG:COG1199 TIGRFAMs:TIGR00604 GO:GO:0035315
GO:GO:0043139 KO:K10844 EMBL:BC147982 IPI:IPI00866827
RefSeq:NP_001096787.1 UniGene:Bt.4215 STRING:A6QLJ0 PRIDE:A6QLJ0
GeneID:100125238 KEGG:bta:100125238 CTD:2068 HOVERGEN:HBG051498
NextBio:20788783 GO:GO:0033683 Uniprot:A6QLJ0
Length = 760
Score = 105 (42.0 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEAN 134
DRTP LHF C+++ L + E +SVI+TSGTL+P+D + L P+ + A
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFH-PVTM-AT 480
Query: 135 HVIDKDQVFIG--VLGQGQ-KVFIGVLGQGPQNIPLQALYKNTLV 176
+ +V + ++G+G +V I + ++I + Y N L+
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLL 525
Score = 53 (23.7 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 4 LSSRKHTCINDEV--LKAKENINDLCQELKETEGESNRWYRKD 44
LSSRK+ CI+ EV L+ ++++ C L T Y++D
Sbjct: 109 LSSRKNLCIHPEVTPLRFGKDVDGKCHSL--TASYVRAQYQRD 149
>UNIPROTKB|J9NWT1 [details] [associations]
symbol:ERCC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR010643
InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777 Pfam:PF13307
PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004003 GO:GO:0006289 TIGRFAMs:TIGR00604
GeneTree:ENSGT00550000075092 EMBL:AAEX03000876
Ensembl:ENSCAFT00000044333 Uniprot:J9NWT1
Length = 707
Score = 105 (42.0 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEAN 134
DRTP LHF C+++ L + E +SVI+TSGTL+P+D + L P+ + A
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFH-PVTM-AT 480
Query: 135 HVIDKDQVFIG--VLGQGQ-KVFIGVLGQGPQNIPLQALYKNTLV 176
+ +V + ++G+G +V I + ++I + Y N L+
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLL 525
Score = 52 (23.4 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 4 LSSRKHTCINDEVLKAK--ENINDLCQELKETEGESNRWYRKD 44
LSSRK+ CI+ EV+ + ++++ C L T Y++D
Sbjct: 109 LSSRKNLCIHPEVMPLRFGKDVDGKCHSL--TASYVRAQYQQD 149
>UNIPROTKB|Q60452 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:10029 "Cricetulus griseus"
[GO:0000075 "cell cycle checkpoint" evidence=ISS] [GO:0005675 "holo
TFIIH complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005819 "spindle" evidence=ISS] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0006468 "protein phosphorylation" evidence=ISS]
[GO:0006917 "induction of apoptosis" evidence=ISS] [GO:0006979
"response to oxidative stress" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0008022 "protein
C-terminus binding" evidence=ISS] [GO:0033683 "nucleotide-excision
repair, DNA incision" evidence=ISS] [GO:0035315 "hair cell
differentiation" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0047485 "protein N-terminus binding"
evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS] [GO:0019907
"cyclin-dependent protein kinase activating kinase holoenzyme
complex" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0008353 "RNA polymerase II carboxy-terminal
domain kinase activity" evidence=ISS] InterPro:IPR001945
InterPro:IPR002464 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737 GO:GO:0007059
GO:GO:0006979 GO:GO:0006917 GO:GO:0046872 GO:GO:0003677
GO:GO:0045944 GO:GO:0006468 GO:GO:0051539 GO:GO:0006366
GO:GO:0004003 GO:GO:0071817 GO:GO:0008022 GO:GO:0047485
GO:GO:0000075 GO:GO:0005675 GO:GO:0006283 TIGRFAMs:TIGR00604
GO:GO:0035315 GO:GO:0043139 CTD:2068 HOVERGEN:HBG051498
GO:GO:0033683 EMBL:U04968 EMBL:U04967 PIR:A55732
RefSeq:NP_001231320.1 GeneID:100689272 Uniprot:Q60452
Length = 760
Score = 105 (42.0 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEAN 134
DRTP LHF C+++ L + E +SVI+TSGTL+P+D + L P+ + A
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFH-PVTM-AT 480
Query: 135 HVIDKDQVFIG--VLGQGQ-KVFIGVLGQGPQNIPLQALYKNTLV 176
+ +V + ++G+G +V I + ++I + Y N L+
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLL 525
Score = 52 (23.4 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 4 LSSRKHTCINDEV--LKAKENINDLCQELKETEGESNRWYRKD 44
LSSRK+ CI+ EV L+ ++++ C L T Y++D
Sbjct: 109 LSSRKNLCIHPEVTPLRFGKDVDGKCHSL--TASYVRAQYQQD 149
>RGD|1309109 [details] [associations]
symbol:Ercc2 "excision repair cross-complementing rodent repair
deficiency, complementation group 2" species:10116 "Rattus
norvegicus" [GO:0000075 "cell cycle checkpoint" evidence=IEA;ISO]
[GO:0000441 "SSL2-core TFIIH complex" evidence=IDA] [GO:0001666
"response to hypoxia" evidence=IEP] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005819 "spindle" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006283
"transcription-coupled nucleotide-excision repair"
evidence=IEA;ISO] [GO:0006289 "nucleotide-excision repair"
evidence=ISO] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006468 "protein phosphorylation"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=IEA;ISO]
[GO:0006917 "induction of apoptosis" evidence=IEA;ISO] [GO:0006979
"response to oxidative stress" evidence=IEA;ISO] [GO:0007059
"chromosome segregation" evidence=IEA;ISO] [GO:0007568 "aging"
evidence=IEA;ISO] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0008353 "RNA polymerase II carboxy-terminal
domain kinase activity" evidence=IEA;ISO] [GO:0009411 "response to
UV" evidence=ISO] [GO:0009650 "UV protection" evidence=IEA;ISO]
[GO:0009791 "post-embryonic development" evidence=IEA;ISO]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA;ISO] [GO:0021510 "spinal cord
development" evidence=IEA;ISO] [GO:0022405 "hair cycle process"
evidence=ISO] [GO:0030198 "extracellular matrix organization"
evidence=IEA;ISO] [GO:0030282 "bone mineralization"
evidence=IEA;ISO] [GO:0032289 "central nervous system myelin
formation" evidence=IEA;ISO] [GO:0033683 "nucleotide-excision
repair, DNA incision" evidence=IEA;ISO] [GO:0035264 "multicellular
organism growth" evidence=IEA;ISO] [GO:0035315 "hair cell
differentiation" evidence=IEA;ISO] [GO:0040016 "embryonic cleavage"
evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase
activity" evidence=IEA;ISO] [GO:0043249 "erythrocyte maturation"
evidence=IEA;ISO] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA;ISO] [GO:0043588 "skin development" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0048820 "hair
follicle maturation" evidence=IEA;ISO] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA;ISO] [GO:0071817 "MMXD
complex" evidence=IEA;ISO] [GO:0004672 "protein kinase activity"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 RGD:1309109 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005737 GO:GO:0006915 GO:GO:0043066
GO:GO:0043588 GO:GO:0007059 GO:GO:0006979 GO:GO:0006917
GO:GO:0003677 GO:GO:0008283 GO:GO:0007568 GO:GO:0001701
GO:GO:0001666 GO:GO:0045944 GO:GO:0030198 GO:GO:0040016
GO:GO:0009791 GO:GO:0060218 GO:GO:0004003 GO:GO:0035264
GO:GO:0071817 GO:GO:0021510 GO:GO:0030282 GO:GO:0000075
EMBL:CH473979 GO:GO:0043388 GO:GO:0008353 GO:GO:0009650
GO:GO:0019907 GO:GO:0006283 TIGRFAMs:TIGR00604 GO:GO:0035315
GO:GO:0043139 GO:GO:0043249 KO:K10844 CTD:2068 GO:GO:0033683
OrthoDB:EOG4BVRT2 GO:GO:0000441 GO:GO:0032289 GO:GO:0048820
GeneTree:ENSGT00550000075092 IPI:IPI00367025 RefSeq:NP_001166280.1
UniGene:Rn.41871 Ensembl:ENSRNOT00000024246 GeneID:308415
KEGG:rno:308415 NextBio:658821 Uniprot:D3ZEG9
Length = 760
Score = 105 (42.0 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEAN 134
DRTP LHF C+++ L + E +SVI+TSGTL+P+D + L P+ + A
Sbjct: 423 DRTPTITNPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFH-PVTM-AT 480
Query: 135 HVIDKDQVFIG--VLGQGQ-KVFIGVLGQGPQNIPLQALYKNTLV 176
+ +V + ++G+G +V I + ++I + Y N L+
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLL 525
Score = 52 (23.4 bits), Expect = 9.8e-05, Sum P(2) = 9.8e-05
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 4 LSSRKHTCINDEV--LKAKENINDLCQELKETEGESNRWYRKD 44
LSSRK+ CI+ EV L+ ++++ C L T Y++D
Sbjct: 109 LSSRKNLCIHPEVTPLRFGKDVDGKCHSL--TASYVRAQYQQD 149
>UNIPROTKB|F1PMH9 [details] [associations]
symbol:ERCC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR010643
InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777 Pfam:PF13307
PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004003 GO:GO:0006289 TIGRFAMs:TIGR00604
OMA:KDVDGKC GeneTree:ENSGT00550000075092 EMBL:AAEX03000876
Ensembl:ENSCAFT00000007249 Uniprot:F1PMH9
Length = 771
Score = 105 (42.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEAN 134
DRTP LHF C+++ L + E +SVI+TSGTL+P+D + L P+ + A
Sbjct: 435 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFH-PVTM-AT 492
Query: 135 HVIDKDQVFIG--VLGQGQ-KVFIGVLGQGPQNIPLQALYKNTLV 176
+ +V + ++G+G +V I + ++I + Y N L+
Sbjct: 493 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLL 537
Score = 52 (23.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 4 LSSRKHTCINDEVLKAK--ENINDLCQELKETEGESNRWYRKD 44
LSSRK+ CI+ EV+ + ++++ C L T Y++D
Sbjct: 121 LSSRKNLCIHPEVMPLRFGKDVDGKCHSL--TASYVRAQYQQD 161
>UNIPROTKB|A8MX75 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9606 "Homo sapiens" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 GO:GO:0006289
TIGRFAMs:TIGR00604 HOGENOM:HOG000205390 HOVERGEN:HBG051498
EMBL:L47234 HGNC:HGNC:3434 ChiTaRS:ERCC2 IPI:IPI00442420
ProteinModelPortal:A8MX75 STRING:A8MX75 PRIDE:A8MX75
Ensembl:ENST00000391941 ArrayExpress:A8MX75 Bgee:A8MX75
Uniprot:A8MX75
Length = 706
Score = 105 (42.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEAN 134
DRTP LHF C+++ L + E +SVI+TSGTL+P+D + L P+ + A
Sbjct: 399 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFH-PVTM-AT 456
Query: 135 HVIDKDQVFIG--VLGQGQ-KVFIGVLGQGPQNIPLQALYKNTLV 176
+ +V + ++G+G +V I + ++I + Y N L+
Sbjct: 457 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLL 501
Score = 51 (23.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 4 LSSRKHTCINDEV--LKAKENINDLCQEL 30
LSSRK+ CI+ EV L+ ++++ C L
Sbjct: 85 LSSRKNLCIHPEVTPLRFGKDVDGKCHSL 113
>UNIPROTKB|E7EVE9 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9606 "Homo sapiens" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604 EMBL:L47234
HGNC:HGNC:3434 ChiTaRS:ERCC2 IPI:IPI00745781
ProteinModelPortal:E7EVE9 Ensembl:ENST00000391944 UCSC:uc010ejz.2
ArrayExpress:E7EVE9 Bgee:E7EVE9 Uniprot:E7EVE9
Length = 682
Score = 105 (42.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEAN 134
DRTP LHF C+++ L + E +SVI+TSGTL+P+D + L P+ + A
Sbjct: 345 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFH-PVTM-AT 402
Query: 135 HVIDKDQVFIG--VLGQGQ-KVFIGVLGQGPQNIPLQALYKNTLV 176
+ +V + ++G+G +V I + ++I + Y N L+
Sbjct: 403 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLL 447
Score = 50 (22.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/16 (62%), Positives = 13/16 (81%)
Query: 4 LSSRKHTCINDEVLKA 19
LSSRK+ CI+ E+L A
Sbjct: 109 LSSRKNLCIHPEILHA 124
>UNIPROTKB|P18074 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9606 "Homo sapiens" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0021510 "spinal cord
development" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030282 "bone mineralization"
evidence=IEA] [GO:0032289 "central nervous system myelin formation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0040016 "embryonic cleavage" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043249 "erythrocyte maturation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0048820 "hair
follicle maturation" evidence=IEA] [GO:0060218 "hematopoietic stem
cell differentiation" evidence=IEA] [GO:0000441 "SSL2-core TFIIH
complex" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007568 "aging" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA;TAS] [GO:0006289 "nucleotide-excision repair"
evidence=IGI;NAS;TAS] [GO:0047485 "protein N-terminus binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006917 "induction of apoptosis" evidence=IMP] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IDA;TAS]
[GO:0005675 "holo TFIIH complex" evidence=IDA;TAS] [GO:0033683
"nucleotide-excision repair, DNA incision" evidence=IMP]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IDA;TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035315 "hair cell differentiation" evidence=IMP]
[GO:0000075 "cell cycle checkpoint" evidence=IMP] [GO:0006979
"response to oxidative stress" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0008353 "RNA
polymerase II carboxy-terminal domain kinase activity"
evidence=IDA] [GO:0009650 "UV protection" evidence=IGI] [GO:0000718
"nucleotide-excision repair, DNA damage removal" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] [GO:0006360 "transcription from RNA polymerase I
promoter" evidence=TAS] [GO:0006361 "transcription initiation from
RNA polymerase I promoter" evidence=TAS] [GO:0006362 "transcription
elongation from RNA polymerase I promoter" evidence=TAS]
[GO:0006363 "termination of RNA polymerase I transcription"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=TAS]
[GO:0006370 "7-methylguanosine mRNA capping" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0050434 "positive regulation of
viral transcription" evidence=TAS] [GO:0006468 "protein
phosphorylation" evidence=IDA] Reactome:REACT_216 Reactome:REACT_71
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR010643
InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777 Pfam:PF13307
PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737
Reactome:REACT_116125 GO:GO:0006915 GO:GO:0019048 GO:GO:0043066
GO:GO:0043588 GO:GO:0007059 GO:GO:0016032 GO:GO:0006979
GO:GO:0006917 GO:GO:0046872 GO:GO:0003677 GO:GO:0008283
GO:GO:0007568 GO:GO:0001701 GO:GO:0001666 Reactome:REACT_1675
GO:GO:0045944 GO:GO:0030198 GO:GO:0006468 EMBL:CH471126
GO:GO:0040016 GO:GO:0051539 GO:GO:0009791 GO:GO:0060218
GO:GO:0004003 GO:GO:0035264 GO:GO:0006368 GO:GO:0071817
GO:GO:0021510 GO:GO:0030282 GO:GO:0006367 GO:GO:0000075
Reactome:REACT_1788 GO:GO:0043388 GO:GO:0009650 GO:GO:0005675
GO:GO:0006370 GO:GO:0000718 GO:GO:0050434 GO:GO:0006363
GO:GO:0006362 GO:GO:0006361 GO:GO:0006283 GO:GO:0008094
eggNOG:COG1199 TIGRFAMs:TIGR00604 GO:GO:0035315 GO:GO:0043139
GO:GO:0043249 Orphanet:1466 HOGENOM:HOG000205390 KO:K10844
OMA:KDVDGKC CTD:2068 HOVERGEN:HBG051498 GO:GO:0033683 EMBL:X52221
EMBL:X52222 EMBL:L47234 EMBL:AY092780 EMBL:BT006883 EMBL:BC108255
EMBL:BC110523 IPI:IPI00029728 IPI:IPI00984321 PIR:S10888
RefSeq:NP_000391.1 RefSeq:NP_001124339.1 UniGene:Hs.487294
ProteinModelPortal:P18074 DIP:DIP-644N STRING:P18074
PhosphoSite:P18074 DMDM:119540 PaxDb:P18074 PRIDE:P18074 DNASU:2068
Ensembl:ENST00000391940 Ensembl:ENST00000391942
Ensembl:ENST00000391945 GeneID:2068 KEGG:hsa:2068 UCSC:uc002pbj.2
GeneCards:GC19M045854 HGNC:HGNC:3434 HPA:CAB005375 MIM:126340
MIM:278730 MIM:601675 MIM:610756 neXtProt:NX_P18074 Orphanet:231256
Orphanet:453 Orphanet:670 Orphanet:276258 Orphanet:220295
PharmGKB:PA27848 InParanoid:P18074 OrthoDB:EOG4BVRT2
PhylomeDB:P18074 ChiTaRS:ERCC2 GenomeRNAi:2068 NextBio:8409
ArrayExpress:P18074 Bgee:P18074 CleanEx:HS_ERCC2
Genevestigator:P18074 GermOnline:ENSG00000104884 GO:GO:0000441
GO:GO:0032289 GO:GO:0048820 Uniprot:P18074
Length = 760
Score = 105 (42.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/105 (30%), Positives = 55/105 (52%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSFQSELGTQFPIKLEAN 134
DRTP LHF C+++ L + E +SVI+TSGTL+P+D + L P+ + A
Sbjct: 423 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFH-PVTM-AT 480
Query: 135 HVIDKDQVFIG--VLGQGQ-KVFIGVLGQGPQNIPLQALYKNTLV 176
+ +V + ++G+G +V I + ++I + Y N L+
Sbjct: 481 FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLL 525
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 4 LSSRKHTCINDEV--LKAKENINDLCQEL 30
LSSRK+ CI+ EV L+ ++++ C L
Sbjct: 109 LSSRKNLCIHPEVTPLRFGKDVDGKCHSL 137
>UNIPROTKB|K7EKF3 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9606 "Homo sapiens" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR001945
InterPro:IPR010643 Pfam:PF06777 PRINTS:PR00852 EMBL:L47234
HGNC:HGNC:3434 Ensembl:ENST00000587376 Uniprot:K7EKF3
Length = 202
Score = 103 (41.3 bits), Expect = 0.00065, P = 0.00065
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
DRTP LHF C+++ L + E +SVI+TSGTL+P+D +
Sbjct: 131 DRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIY 175
>FB|FBgn0261850 [details] [associations]
symbol:Xpd "Xeroderma pigmentosum D" species:7227 "Drosophila
melanogaster" [GO:0006289 "nucleotide-excision repair"
evidence=ISS;IDA] [GO:0001113 "transcriptional open complex
formation at RNA polymerase II promoter" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISS;IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005675 "holo TFIIH complex"
evidence=ISS] [GO:0009411 "response to UV" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005703 "polytene
chromosome puff" evidence=IDA] [GO:0000439 "core TFIIH complex"
evidence=ISS;IDA] [GO:0001111 "promoter clearance from RNA
polymerase II promoter" evidence=ISS] [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0007088
"regulation of mitosis" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0051983 "regulation of chromosome
segregation" evidence=IMP] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 EMBL:AE013599
GO:GO:0005524 GO:GO:0005737 GO:GO:0007088 GO:GO:0009411
GO:GO:0003677 GO:GO:0006367 GO:GO:0006289 GO:GO:0051983
GO:GO:0005675 GO:GO:0005703 GO:GO:0010972 GO:GO:0005705
TIGRFAMs:TIGR00604 KO:K10844 OMA:KDVDGKC GO:GO:0043141
GeneTree:ENSGT00550000075092 GO:GO:0000439 FlyBase:FBgn0261850
RefSeq:NP_726036.2 UniGene:Dm.718 ProteinModelPortal:Q7KVP9
STRING:Q7KVP9 PRIDE:Q7KVP9 EnsemblMetazoa:FBtr0071576 GeneID:37414
KEGG:dme:Dmel_CG9433 UCSC:CG9433-RA CTD:37414 InParanoid:Q7KVP9
OrthoDB:EOG4FTTFK PhylomeDB:Q7KVP9 GenomeRNAi:37414 NextBio:803510
ArrayExpress:Q7KVP9 Bgee:Q7KVP9 Uniprot:Q7KVP9
Length = 769
Score = 95 (38.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 75 DRTPMSIKYTLHFWCLNSGLVFSDIRESARSVILTSGTLAPVDSF 119
D+TP LHF CL+S + + + ++V++TSGTL+P+D +
Sbjct: 423 DKTPTVSNPILHFSCLDSSIAMAPVFSRFQTVVITSGTLSPMDMY 467
Score = 56 (24.8 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 11/19 (57%), Positives = 15/19 (78%)
Query: 3 ILSSRKHTCINDEVLKAKE 21
+LSSRK+ CI+ EV K +E
Sbjct: 108 VLSSRKNMCIHPEVSKERE 126
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.135 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 179 179 0.00089 109 3 11 22 0.45 32
31 0.39 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 62
No. of states in DFA: 583 (62 KB)
Total size of DFA: 157 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 17.25u 0.09s 17.34t Elapsed: 00:00:23
Total cpu time: 17.26u 0.09s 17.35t Elapsed: 00:00:26
Start: Thu Aug 15 13:32:31 2013 End: Thu Aug 15 13:32:57 2013