Query psy8763
Match_columns 641
No_of_seqs 351 out of 3359
Neff 11.8
Searched_HMMs 29240
Date Fri Aug 16 18:38:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8763.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8763hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 1.3E-66 4.3E-71 522.2 48.0 400 20-600 2-401 (437)
2 1n11_A Ankyrin; clathrin, BAND 100.0 1.1E-66 3.9E-71 522.5 44.2 394 59-634 6-399 (437)
3 4g8k_A 2-5A-dependent ribonucl 100.0 5.7E-46 1.9E-50 358.3 35.1 307 110-527 23-330 (337)
4 3utm_A Tankyrase-1; tankyrase, 100.0 4.7E-46 1.6E-50 362.7 28.2 139 463-623 209-350 (351)
5 4g8k_A 2-5A-dependent ribonucl 100.0 5.8E-44 2E-48 344.3 33.0 301 65-423 23-330 (337)
6 1wdy_A 2-5A-dependent ribonucl 100.0 4E-42 1.4E-46 324.3 30.4 263 318-609 4-283 (285)
7 1wdy_A 2-5A-dependent ribonucl 100.0 4.6E-42 1.6E-46 323.9 30.7 262 30-380 3-280 (285)
8 3utm_A Tankyrase-1; tankyrase, 100.0 1.3E-41 4.4E-46 331.4 27.8 320 15-405 7-350 (351)
9 2fo1_E LIN-12 protein; beta-ba 100.0 1.7E-42 5.9E-47 337.2 19.2 322 154-601 38-371 (373)
10 2fo1_E LIN-12 protein; beta-ba 100.0 9E-43 3.1E-47 339.2 16.2 264 316-636 91-370 (373)
11 1yyh_A HN1;, notch 1, ankyrin 100.0 3.6E-42 1.2E-46 316.5 18.7 233 387-639 3-250 (253)
12 2xai_A ASB-9, ankyrin repeat a 100.0 3.1E-41 1.1E-45 311.6 23.2 207 31-266 2-208 (261)
13 3d9h_A CDNA FLJ77766, highly s 100.0 1.9E-41 6.6E-46 316.7 19.8 222 389-634 54-275 (285)
14 3ljn_A Hypothetical protein; a 100.0 9.5E-42 3.2E-46 332.6 18.2 277 21-340 9-310 (364)
15 1yyh_A HN1;, notch 1, ankyrin 100.0 6.7E-41 2.3E-45 308.1 22.6 233 23-308 1-247 (253)
16 3d9h_A CDNA FLJ77766, highly s 100.0 1.6E-40 5.6E-45 310.5 24.0 262 26-379 9-280 (285)
17 2xai_A ASB-9, ankyrin repeat a 100.0 8.6E-41 2.9E-45 308.7 19.3 250 352-630 2-256 (261)
18 3b7b_A Euchromatic histone-lys 100.0 1.5E-39 5.2E-44 296.9 25.7 219 23-268 2-221 (237)
19 1k1a_A B-cell lymphoma 3-encod 100.0 4.6E-40 1.6E-44 301.4 21.0 227 388-634 3-238 (241)
20 1oy3_D Transcription factor in 100.0 9.7E-40 3.3E-44 307.2 22.9 228 25-269 2-270 (282)
21 3ljn_A Hypothetical protein; a 100.0 4.5E-41 1.5E-45 327.8 12.6 277 311-633 12-310 (364)
22 3b7b_A Euchromatic histone-lys 100.0 1E-39 3.5E-44 298.0 20.7 223 388-630 5-228 (237)
23 1k1a_A B-cell lymphoma 3-encod 100.0 1.9E-39 6.6E-44 297.3 20.7 221 25-268 2-227 (241)
24 4b93_B Ankyrin repeat domain-c 100.0 4.1E-40 1.4E-44 303.1 14.8 221 391-631 8-238 (269)
25 4b93_B Ankyrin repeat domain-c 100.0 3.6E-40 1.2E-44 303.5 14.3 232 353-601 11-244 (269)
26 3aji_A 26S proteasome non-ATPa 100.0 4.2E-39 1.4E-43 292.6 18.8 224 392-635 4-228 (231)
27 1oy3_D Transcription factor in 100.0 5E-39 1.7E-43 302.3 19.5 217 388-624 3-270 (282)
28 3aji_A 26S proteasome non-ATPa 100.0 3.5E-38 1.2E-42 286.6 23.7 213 30-268 4-216 (231)
29 2f8y_A Notch homolog 1, transl 100.0 1.2E-37 4.1E-42 281.3 25.9 215 9-251 2-218 (223)
30 2dzn_A Probable 26S proteasome 100.0 2.9E-38 1E-42 286.6 20.3 219 394-633 2-226 (228)
31 3kea_A K1L; tropism, ANK repea 100.0 6.4E-39 2.2E-43 299.4 15.4 244 1-310 2-247 (285)
32 2dzn_A Probable 26S proteasome 100.0 2.1E-37 7.1E-42 281.0 24.0 212 32-265 2-216 (228)
33 3eu9_A Huntingtin-interacting 100.0 1.1E-37 3.9E-42 285.6 20.1 229 391-637 6-235 (240)
34 3eu9_A Huntingtin-interacting 100.0 1.3E-36 4.6E-41 278.4 25.2 231 25-309 2-235 (240)
35 2f8y_A Notch homolog 1, transl 100.0 1E-37 3.4E-42 281.8 16.4 210 405-634 2-213 (223)
36 3kea_A K1L; tropism, ANK repea 100.0 6.7E-37 2.3E-41 285.8 18.2 254 331-627 12-267 (285)
37 1ikn_D Protein (I-kappa-B-alph 100.0 2.8E-37 9.6E-42 281.1 14.9 220 26-264 2-226 (236)
38 1s70_B 130 kDa myosin-binding 100.0 1.9E-37 6.5E-42 293.9 12.8 214 392-625 38-278 (299)
39 1s70_B 130 kDa myosin-binding 100.0 1.6E-36 5.5E-41 287.5 15.5 238 1-265 1-273 (299)
40 1sw6_A Regulatory protein SWI6 100.0 2.8E-37 9.7E-42 294.3 10.2 258 332-623 32-327 (327)
41 2rfa_A Transient receptor pote 100.0 1.9E-35 6.7E-40 268.5 20.6 208 31-252 2-225 (232)
42 2rfa_A Transient receptor pote 100.0 3.7E-35 1.3E-39 266.6 21.3 197 393-601 2-222 (232)
43 1ikn_D Protein (I-kappa-B-alph 100.0 2.6E-36 9E-41 274.7 11.4 218 389-624 3-231 (236)
44 3hra_A Ankyrin repeat family p 100.0 5.6E-34 1.9E-38 252.6 23.1 193 29-247 2-201 (201)
45 2pnn_A Transient receptor pote 100.0 1E-35 3.5E-40 277.3 12.2 240 20-260 1-270 (273)
46 4gpm_A Engineered protein OR26 100.0 3.1E-34 1.1E-38 242.3 19.1 156 429-601 6-161 (169)
47 3hra_A Ankyrin repeat family p 100.0 2.3E-33 7.7E-38 248.7 23.1 195 393-599 4-201 (201)
48 4gpm_A Engineered protein OR26 100.0 1.2E-33 4E-38 238.8 19.9 159 69-252 6-164 (169)
49 1sw6_A Regulatory protein SWI6 100.0 3.5E-35 1.2E-39 279.9 11.0 273 6-364 27-327 (327)
50 2etb_A Transient receptor pote 100.0 2.9E-34 1E-38 264.8 15.1 207 31-251 1-248 (256)
51 2etb_A Transient receptor pote 100.0 4.9E-34 1.7E-38 263.2 15.2 205 394-601 2-246 (256)
52 2pnn_A Transient receptor pote 100.0 1.4E-33 4.7E-38 262.9 15.1 222 388-615 7-270 (273)
53 3jxi_A Vanilloid receptor-rela 100.0 6.7E-33 2.3E-37 256.5 12.8 207 392-601 3-250 (260)
54 3jxi_A Vanilloid receptor-rela 100.0 2.1E-32 7.3E-37 253.1 15.6 222 29-251 2-252 (260)
55 2vge_A RELA-associated inhibit 100.0 3E-33 1E-37 250.8 6.5 208 410-638 1-215 (229)
56 4hbd_A KN motif and ankyrin re 100.0 5.9E-32 2E-36 250.7 15.3 194 29-247 73-273 (276)
57 2rfm_A Putative ankyrin repeat 100.0 5.5E-32 1.9E-36 237.3 13.9 162 458-634 28-189 (192)
58 2rfm_A Putative ankyrin repeat 100.0 2.1E-31 7.1E-36 233.6 16.4 164 24-209 27-190 (192)
59 3v30_A DNA-binding protein rfx 100.0 2.3E-31 7.7E-36 228.9 15.9 170 427-615 2-171 (172)
60 4hbd_A KN motif and ankyrin re 100.0 3.3E-32 1.1E-36 252.5 11.1 187 430-634 79-272 (276)
61 3v30_A DNA-binding protein rfx 100.0 8.8E-31 3E-35 225.2 16.9 170 32-227 2-171 (172)
62 3v31_A Ankyrin repeat family A 100.0 3.9E-31 1.3E-35 226.2 14.2 157 427-600 3-159 (167)
63 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.4E-30 8.3E-35 221.3 18.5 160 28-209 10-169 (169)
64 3v31_A Ankyrin repeat family A 100.0 3.1E-30 1.1E-34 220.6 19.1 160 30-211 1-160 (167)
65 2y1l_E Darpin-8.4; hydrolase-i 100.0 4.8E-31 1.6E-35 225.7 13.8 156 463-633 12-167 (169)
66 1ihb_A P18-INK4C(INK6), cyclin 100.0 4E-30 1.4E-34 218.8 16.5 156 32-210 5-161 (162)
67 1ihb_A P18-INK4C(INK6), cyclin 100.0 5.5E-30 1.9E-34 218.0 17.3 159 66-249 4-162 (162)
68 1awc_B Protein (GA binding pro 100.0 2E-30 6.9E-35 217.8 14.1 150 466-631 3-152 (153)
69 1awc_B Protein (GA binding pro 100.0 1.5E-29 5.3E-34 212.4 17.4 151 32-205 2-152 (153)
70 3f6q_A Integrin-linked protein 100.0 9.1E-30 3.1E-34 220.2 16.3 166 426-610 4-169 (179)
71 3twr_A Tankyrase-2; ankyrin re 100.0 8E-30 2.7E-34 217.5 14.5 160 424-600 5-164 (165)
72 2vge_A RELA-associated inhibit 100.0 2.3E-32 8E-37 245.0 -1.5 202 370-596 2-208 (229)
73 3twr_A Tankyrase-2; ankyrin re 100.0 7.3E-30 2.5E-34 217.7 13.8 161 28-210 4-164 (165)
74 2aja_A Ankyrin repeat family p 100.0 2.3E-32 7.9E-37 261.3 -2.2 297 31-374 64-370 (376)
75 3f6q_A Integrin-linked protein 100.0 2.6E-29 8.8E-34 217.3 16.3 160 31-211 4-163 (179)
76 1bd8_A P19INK4D CDK4/6 inhibit 100.0 6.8E-30 2.3E-34 215.8 12.2 150 467-633 4-154 (156)
77 1bd8_A P19INK4D CDK4/6 inhibit 100.0 5.2E-29 1.8E-33 210.3 16.3 154 32-208 2-155 (156)
78 2aja_A Ankyrin repeat family p 100.0 1.1E-31 3.9E-36 256.5 -0.5 249 355-635 94-372 (376)
79 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.1E-29 3.9E-34 230.4 7.9 185 426-633 4-200 (239)
80 1ycs_B 53BP2, P53BP2; ankyrin 100.0 2.6E-30 8.8E-35 234.7 3.0 210 392-621 3-227 (239)
81 3t8k_A Uncharacterized protein 100.0 2.1E-28 7.3E-33 210.5 10.2 165 428-609 7-184 (186)
82 1d9s_A Cyclin-dependent kinase 100.0 5.3E-28 1.8E-32 198.1 11.7 132 457-601 4-136 (136)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 3.4E-28 1.2E-32 204.6 10.3 145 459-619 6-151 (156)
84 1d9s_A Cyclin-dependent kinase 99.9 1.1E-27 3.8E-32 196.3 11.4 134 22-178 2-136 (136)
85 3t8k_A Uncharacterized protein 99.9 2.6E-28 8.8E-33 210.0 6.1 159 465-634 6-176 (186)
86 1bi7_B P16INK4A, MTS1, multipl 99.9 4.2E-27 1.5E-31 198.0 10.4 146 25-193 5-151 (156)
87 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1E-25 3.4E-30 182.7 14.6 126 464-601 1-126 (126)
88 2jab_A H10-2-G3; HER2, darpin, 99.9 4.2E-26 1.4E-30 186.8 12.4 127 461-599 10-136 (136)
89 3c5r_A BARD-1, BRCA1-associate 99.9 1.3E-26 4.6E-31 190.3 8.7 133 488-636 1-133 (137)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 3.3E-25 1.1E-29 181.4 13.5 128 27-176 9-136 (136)
91 3deo_A Signal recognition part 99.9 1.4E-25 4.9E-30 194.2 11.5 166 3-208 5-181 (183)
92 1n0r_A 4ANK, 4 ankyrin repeats 99.9 7.5E-25 2.6E-29 177.5 14.9 126 31-178 1-126 (126)
93 3c5r_A BARD-1, BRCA1-associate 99.9 1.8E-25 6.1E-30 183.6 9.4 130 460-601 5-134 (137)
94 3ui2_A Signal recognition part 99.9 8.9E-25 3E-29 198.4 11.5 170 31-248 14-184 (244)
95 2b0o_E UPLC1; arfgap, structur 99.9 9.4E-25 3.2E-29 203.8 11.2 140 465-625 151-299 (301)
96 3ui2_A Signal recognition part 99.9 3.6E-25 1.2E-29 201.0 6.8 143 28-210 41-184 (244)
97 3deo_A Signal recognition part 99.9 7.1E-25 2.4E-29 189.8 7.7 137 464-633 43-180 (183)
98 3aaa_C Myotrophin, protein V-1 99.9 2.6E-24 9E-29 172.7 8.2 108 464-583 6-113 (123)
99 3aaa_C Myotrophin, protein V-1 99.9 4.4E-24 1.5E-28 171.4 9.4 118 495-627 4-121 (123)
100 3ehr_A Osteoclast-stimulating 99.9 2E-24 6.8E-29 193.9 6.8 129 461-601 69-198 (222)
101 1dcq_A PYK2-associated protein 99.9 2.8E-23 9.6E-28 191.5 11.1 192 391-602 63-264 (278)
102 3ehr_A Osteoclast-stimulating 99.9 2E-23 6.9E-28 187.3 8.9 135 28-183 69-203 (222)
103 2b0o_E UPLC1; arfgap, structur 99.9 1.1E-22 3.7E-27 189.9 13.7 140 67-237 151-299 (301)
104 3jue_A Arfgap with coiled-coil 99.9 6.3E-23 2.2E-27 195.2 12.2 151 462-624 196-349 (368)
105 3lvq_E ARF-GAP with SH3 domain 99.9 6.7E-22 2.3E-26 199.2 14.2 123 467-601 134-265 (497)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.9 9.2E-22 3.1E-26 148.6 10.8 92 498-601 2-93 (93)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.9E-21 6.5E-26 146.9 11.3 93 31-137 1-93 (93)
108 1dcq_A PYK2-associated protein 99.9 1.1E-20 3.9E-25 174.1 17.2 132 112-250 130-264 (278)
109 3jue_A Arfgap with coiled-coil 99.8 4.3E-21 1.5E-25 182.6 13.2 163 65-249 197-364 (368)
110 2l6b_A NR1C; ankyrin, consensu 99.8 2.7E-21 9.4E-26 153.0 9.2 107 494-615 5-111 (115)
111 3lvq_E ARF-GAP with SH3 domain 99.8 8.5E-21 2.9E-25 191.2 14.3 135 33-195 133-276 (497)
112 2l6b_A NR1C; ankyrin, consensu 99.8 4.2E-21 1.4E-25 151.9 8.9 108 460-579 4-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 3.5E-18 1.2E-22 133.2 10.0 97 21-131 13-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.7 3.3E-18 1.1E-22 133.4 8.3 88 496-595 22-109 (110)
115 3mkq_B Coatomer subunit alpha; 55.1 76 0.0026 25.8 8.6 131 67-246 8-140 (177)
116 3mkq_B Coatomer subunit alpha; 42.8 1.3E+02 0.0046 24.3 9.1 132 33-209 9-141 (177)
117 4g26_A Pentatricopeptide repea 41.5 38 0.0013 33.5 6.0 144 34-208 31-200 (501)
118 1gp8_A Protein (scaffolding pr 35.4 31 0.0011 19.3 2.3 19 116-134 17-35 (40)
119 4g26_A Pentatricopeptide repea 32.9 32 0.0011 34.0 3.9 151 70-251 32-209 (501)
120 3zrh_A Ubiquitin thioesterase 32.3 1.9E+02 0.0063 27.1 8.2 63 159-245 28-90 (454)
121 3qil_A Clathrin heavy chain 1; 22.8 85 0.0029 23.4 3.5 37 102-138 25-61 (125)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.3e-66 Score=522.24 Aligned_cols=400 Identities=25% Similarity=0.320 Sum_probs=318.2
Q ss_pred CCCcccccccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhh
Q psy8763 20 SSGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVK 99 (641)
Q Consensus 20 ~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~ 99 (641)
+.|++++..+..|+||||+|+..|+.++|++|+++|+ +++..+..|.||||+|+..|+.+++++|+++
T Consensus 2 ~~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~--~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~---------- 69 (437)
T 1n11_A 2 SPGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGA--SPNVSNVKVETPLHMAARAGHTEVAKYLLQN---------- 69 (437)
T ss_dssp -------------CCHHHHHHHHTCHHHHHHHHHTTC--CSCCSSSCCCCHHHHHHHHTCHHHHHHHHHH----------
T ss_pred CCCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC----------
Confidence 4678888888889999999999999999999998887 5556778888999999999999999999888
Q ss_pred hcCCCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCC
Q psy8763 100 DFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKI 179 (641)
Q Consensus 100 ~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~ 179 (641)
|++++.++..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.++|++|++.|+++
T Consensus 70 --g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~--------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 139 (437)
T 1n11_A 70 --KAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANP--------NLATTAGHTPLHIAAREGHVETVLALLEKEASQ 139 (437)
T ss_dssp --TCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT--------TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS
T ss_pred --CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCC--------CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 8888888888888888888888888888888888876 455777888888888888888888888888888
Q ss_pred CcCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCccCCCCCC
Q psy8763 180 STQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRS 259 (641)
Q Consensus 180 ~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~t 259 (641)
+..+..|.||||+|+..|+.+++++|++++.. ++..+..|.|||++|+..++.+++++|+++|++++..+.
T Consensus 140 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~---- 210 (437)
T 1n11_A 140 ACMTKKGFTPLHVAAKYGKVRVAELLLERDAH-----PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAW---- 210 (437)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCT----
T ss_pred cCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-----CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCC----
Confidence 87777888888888888888888888887776 466777778888888888888888888877765542211
Q ss_pred HHHHHHHcCCcccccccccccccCchhHHHHHHhcCChhHHHHHhhCCCcccccCCCCCcchHHHHHHHhCcHHHHHHHH
Q psy8763 260 PLLLAASRGGWKTNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILV 339 (641)
Q Consensus 260 ~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll 339 (641)
T Consensus 211 -------------------------------------------------------------------------------- 210 (437)
T 1n11_A 211 -------------------------------------------------------------------------------- 210 (437)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCccccccccCCCChHHHHHHcCChHHHHHHHhccccccCChHHHhHHHhhcCChHHHHHHhcCCHHHHHHHHHCCCC
Q psy8763 340 KDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGDFKAVELCLKSGAK 419 (641)
Q Consensus 340 ~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~ 419 (641)
.|.||||.|+..++.+++++|++.|++
T Consensus 211 -----------------------------------------------------~g~t~L~~A~~~~~~~~~~~Ll~~g~~ 237 (437)
T 1n11_A 211 -----------------------------------------------------NGYTPLHIAAKQNQVEVARSLLQYGGS 237 (437)
T ss_dssp -----------------------------------------------------TCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred -----------------------------------------------------CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 133444445555555666666666777
Q ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCC
Q psy8763 420 ISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKR 499 (641)
Q Consensus 420 ~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 499 (641)
++..+..|.||||.|+..|+.+++++|++.+. +++..+..|.||||+|+..++.+++++|+++|++++..+..|+
T Consensus 238 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 312 (437)
T 1n11_A 238 ANAESVQGVTPLHLAAQEGHAEMVALLLSKQA-----NGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGY 312 (437)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC-----CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCC
T ss_pred CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCC-----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCC
Confidence 77777778888888888888888888887443 3677788888999999999999999999999999999999999
Q ss_pred CHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCCh
Q psy8763 500 SPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESP 579 (641)
Q Consensus 500 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 579 (641)
||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|++++.+|..|.||
T Consensus 313 t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g------------~~~iv~~Ll~~ga~~~~~~~~g~t~ 380 (437)
T 1n11_A 313 TPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQG------------HTDIVTLLLKNGASPNEVSSDGTTP 380 (437)
T ss_dssp CHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------------CHHHHHHHHHTTCCSCCCCSSSCCH
T ss_pred CHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCC------------hHHHHHHHHHCcCCCCCCCCCCCCH
Confidence 9999999999999999999999999999999999999999998 8899999999999999999999999
Q ss_pred HHHHHhcCCHHHHHHHHhcCC
Q psy8763 580 LHLAARYGRYNTVKKLLSSER 600 (641)
Q Consensus 580 L~~A~~~~~~~~v~~Ll~~g~ 600 (641)
|++|++.|+.+++++|.....
T Consensus 381 l~~A~~~g~~~~~~~l~~~~~ 401 (437)
T 1n11_A 381 LAIAKRLGYISVTDVLKVVTD 401 (437)
T ss_dssp HHHHHHTTCHHHHHHHHHHCC
T ss_pred HHHHHHcCcHHHHHHHHhccc
Confidence 999999999999998876543
No 2
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.1e-66 Score=522.52 Aligned_cols=394 Identities=28% Similarity=0.374 Sum_probs=335.7
Q ss_pred ccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccC
Q psy8763 59 DILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESI 138 (641)
Q Consensus 59 ~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 138 (641)
+++..+..|.||||+|+..|+.++|++|+++ |++++..+..|.||||.|+..|+.+++++|+++|+++
T Consensus 6 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~------------g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~ 73 (437)
T 1n11_A 6 SGGGGGESGLTPLHVASFMGHLPIVKNLLQR------------GASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV 73 (437)
T ss_dssp ---------CCHHHHHHHHTCHHHHHHHHHT------------TCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHc------------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC
Confidence 5567778888888888888888888888888 8888888888888888888888888888888888876
Q ss_pred CCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCccccccc
Q psy8763 139 GCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLN 218 (641)
Q Consensus 139 ~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~ 218 (641)
+..+..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|++.+.. .+
T Consensus 74 --------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-----~~ 140 (437)
T 1n11_A 74 --------NAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEAS-----QA 140 (437)
T ss_dssp --------SCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----SC
T ss_pred --------CCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-----Cc
Confidence 45577788888888888888888888888888888888888888888888888888888888776 46
Q ss_pred cCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCcccccccccccccCchhHHHHHHhcCChh
Q psy8763 219 STDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTNGVNTRILNNKKQAVLHLATELNKVP 298 (641)
Q Consensus 219 ~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 298 (641)
..+..|.|||++|+..|+.+++++|+++|++++..+.
T Consensus 141 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~------------------------------------------- 177 (437)
T 1n11_A 141 CMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGK------------------------------------------- 177 (437)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCS-------------------------------------------
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCC-------------------------------------------
Confidence 6677788888888888888888888888776653322
Q ss_pred HHHHHhhCCCcccccCCCCCcchHHHHHHHhCcHHHHHHHHHhcCccccccccCCCChHHHHHHcCChHHHHHHHhcccc
Q psy8763 299 ILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGES 378 (641)
Q Consensus 299 ~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~ 378 (641)
T Consensus 178 -------------------------------------------------------------------------------- 177 (437)
T 1n11_A 178 -------------------------------------------------------------------------------- 177 (437)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCChHHHhHHHhhcCChHHHHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccc
Q psy8763 379 IGCSREEMISLFAAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCL 458 (641)
Q Consensus 379 ~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~ 458 (641)
.|.|||+.|+..++.+++++|++.|++++..+..+.||||.|+..++.+++++|++.+. ++
T Consensus 178 --------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-----~~ 238 (437)
T 1n11_A 178 --------------NGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGG-----SA 238 (437)
T ss_dssp --------------SCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-----CT
T ss_pred --------------CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CC
Confidence 23334444555555666666667777888888899999999999999999999999654 47
Q ss_pred ccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHH
Q psy8763 459 NSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLL 538 (641)
Q Consensus 459 ~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a 538 (641)
+..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|
T Consensus 239 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 318 (437)
T 1n11_A 239 NAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVA 318 (437)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHH
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHH
Q psy8763 539 VLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHI 618 (641)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~ 618 (641)
+..+ +.+++++|+++|++++.+|..|.||||+|+..|+.++|++|+++|++ ++..|..|+|||++
T Consensus 319 ~~~g------------~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~---~~~~~~~g~t~l~~ 383 (437)
T 1n11_A 319 SHYG------------NIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGAS---PNEVSSDGTTPLAI 383 (437)
T ss_dssp HHSS------------CSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---SCCCCSSSCCHHHH
T ss_pred HHcC------------cHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCC---CCCCCCCCCCHHHH
Confidence 9999 89999999999999999999999999999999999999999999999 89999999999999
Q ss_pred HHhhCCcceeeeceee
Q psy8763 619 ASKEGFHYSVSIFQVT 634 (641)
Q Consensus 619 A~~~~~~~~~~~l~~~ 634 (641)
|...|+.+++++|...
T Consensus 384 A~~~g~~~~~~~l~~~ 399 (437)
T 1n11_A 384 AKRLGYISVTDVLKVV 399 (437)
T ss_dssp HHHTTCHHHHHHHHHH
T ss_pred HHHcCcHHHHHHHHhc
Confidence 9999999999988543
No 3
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=5.7e-46 Score=358.27 Aligned_cols=307 Identities=23% Similarity=0.283 Sum_probs=264.8
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhcccc-CCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCc
Q psy8763 110 SNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFD-AEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLST 188 (641)
Q Consensus 110 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t 188 (641)
.+|.|+||.|+++|+.++|++|+++|++++ ..+ ..|.||||+|+..|+.++|++|+++|++++.++..+.+
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn--------~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~ 94 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGANVN--------FQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGAT 94 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTCCTT--------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCC
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCC--------ccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCc
Confidence 346799999999999999999999999984 334 45899999999999999999999999999999999999
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q psy8763 189 PVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRG 268 (641)
Q Consensus 189 ~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~ 268 (641)
+++.++..+...++..++..+.+ ++..+..|.|||++|+..|+.+++++|+++|++++.......
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~---------- 159 (337)
T 4g8k_A 95 PFILAAIAGSVKLLKLFLSKGAD-----VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKE---------- 159 (337)
T ss_dssp HHHHHHHHTCHHHHHHHHTTTCC-----TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----------
T ss_pred hhHHHHhcccchhhHHhhhccch-----hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcccc----------
Confidence 99999999999999999999888 688999999999999999999999999999999886543321
Q ss_pred CcccccccccccccCchhHHHHHHhcCChhHHHHHhhCCCcccccCCCCCcchHHHHHHHhCcHHHHHHHHHhcCccccc
Q psy8763 269 GWKTNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVKDFGASLKR 348 (641)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~ 348 (641)
+....+..|.||||+|+..|+.+++++|+++.|++++.
T Consensus 160 ------------------------------------------~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~ 197 (337)
T 4g8k_A 160 ------------------------------------------DQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNA 197 (337)
T ss_dssp ----------------------------------------------CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTC
T ss_pred ------------------------------------------ccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCc
Confidence 12223456889999999999999999999777899988
Q ss_pred cccCCCChHHHHHHcCChHHHHHHHhccccccCChHHHhHHHhhcCChHHHHHHhcCCHHHHHHHHHCCCCCCCCCCCCC
Q psy8763 349 ACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLS 428 (641)
Q Consensus 349 ~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~ 428 (641)
.+..|.++++.++..+.. .+...++++|+++|++++.++..|.
T Consensus 198 ~d~~g~t~l~~~~~~~~~-------------------------------------~~~~~i~~lLl~~gad~n~~d~~g~ 240 (337)
T 4g8k_A 198 CDNMGRNALIHALLSSDD-------------------------------------SDVEAITHLLLDHGADVNVRGERGK 240 (337)
T ss_dssp CCTTSCCHHHHHHHHSCT-------------------------------------TTHHHHHHHHHHTTCCTTCCCGGGC
T ss_pred cCCCCCcHHHHHHHHcCc-------------------------------------ccHHHHHHHHHHCCCCCCCcCCCCC
Confidence 888888888766543221 1123567889999999999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhc
Q psy8763 429 TPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASR 508 (641)
Q Consensus 429 t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 508 (641)
||||.|+..++.++++.|++. .+.+++.+|..|+||||+|+..|+.++|++|+++|+++|. .+|||+|++.
T Consensus 241 t~L~~a~~~~~~~~v~~Ll~~----~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~-----~~~L~~A~~~ 311 (337)
T 4g8k_A 241 TPLILAVEKKHLGLVQRLLEQ----EHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDC-----GDLVMTARRN 311 (337)
T ss_dssp CHHHHHHHTTCHHHHHHHHTS----TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTT-----CCHHHHHHHT
T ss_pred CHHHHHHHhhhhHHHHHHHHh----cCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-----CCHHHHHHHc
Confidence 999999999999999999984 3455889999999999999999999999999999999875 4599999999
Q ss_pred CCHHHHHHHHHcCCCcccc
Q psy8763 509 GGWKTVLTLVRNKANILLK 527 (641)
Q Consensus 509 ~~~~~v~~Ll~~g~~~~~~ 527 (641)
++.+++++|+++|+++|..
T Consensus 312 ~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 312 YDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp TCHHHHHHHHHTTCCC---
T ss_pred CCHHHHHHHHHCcCCCCCC
Confidence 9999999999999999864
No 4
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=4.7e-46 Score=362.72 Aligned_cols=139 Identities=24% Similarity=0.236 Sum_probs=93.7
Q ss_pred CCCCcHHHHHHhc---CChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHh
Q psy8763 463 AQKMTPLHCAAMF---DRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLV 539 (641)
Q Consensus 463 ~~~~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~ 539 (641)
..|.||||+|+.. +..+++++|+++|++++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus 209 ~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~ 288 (351)
T 3utm_A 209 QSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAA 288 (351)
T ss_dssp TTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 3455666666666 3457778888888888888888888888888888888888888888888888888888888888
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHH
Q psy8763 540 LNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIA 619 (641)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A 619 (641)
..+ +.+++++|+++|++++.+|..|.||+++| ..+++++|.+.++. ....+.+++..|
T Consensus 289 ~~~------------~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~------~~~~~~~~l~~A 346 (351)
T 3utm_A 289 LAG------------HLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPM------RTSDVDYRLLEA 346 (351)
T ss_dssp HHT------------CHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC---------------------
T ss_pred HcC------------cHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhcccc------ccCcceeehhhh
Confidence 887 77888888888888888888888888886 56778888777654 455667788888
Q ss_pred HhhC
Q psy8763 620 SKEG 623 (641)
Q Consensus 620 ~~~~ 623 (641)
++.|
T Consensus 347 ~~~g 350 (351)
T 3utm_A 347 SKAG 350 (351)
T ss_dssp ----
T ss_pred hccC
Confidence 7766
No 5
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=5.8e-44 Score=344.25 Aligned_cols=301 Identities=22% Similarity=0.235 Sum_probs=263.5
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCC-CCCcHHHHHHHhCCHHHHHHHHHhcccCCCchh
Q psy8763 65 EHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACS-NGYYPIHDAAKNASSKTMEVFLQFGESIGCSRE 143 (641)
Q Consensus 65 ~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~ 143 (641)
..|.||||.|++.|++++|++|+++ |++++..+. .|+||||+|+..|+.++|++|+++|+++
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~------------Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~----- 85 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEG------------GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP----- 85 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH------------TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-----
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHC------------CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCch-----
Confidence 4578999999999999999999999 999998875 4899999999999999999999999997
Q ss_pred hhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccc-----ccc
Q psy8763 144 EMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLV-----CLN 218 (641)
Q Consensus 144 ~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~-----~~~ 218 (641)
+..+..+.++++.++..+...++..+++.+++++..+..|.||+++|+..|+.+++++|++++++.... ...
T Consensus 86 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~ 162 (337)
T 4g8k_A 86 ---VLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQE 162 (337)
T ss_dssp ---TCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC----
T ss_pred ---hhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccc
Confidence 466889999999999999999999999999999999999999999999999999999999998874221 123
Q ss_pred cCCCCCCcHHHHHHhcCcHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCcccccccccccccCchhHHHHHHhcCCh
Q psy8763 219 STDAQKMTPLHCAAMFDRCDVVQYLID-EGADLNVLDKEKRSPLLLAASRGGWKTNGVNTRILNNKKQAVLHLATELNKV 297 (641)
Q Consensus 219 ~~~~~~~t~L~~A~~~~~~~iv~~Ll~-~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~ 297 (641)
..+..|.||||+|+..|+.++|++|++ .|++++..+..|.++++.++..+.. .+..
T Consensus 163 ~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~-----------------------~~~~ 219 (337)
T 4g8k_A 163 RLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD-----------------------SDVE 219 (337)
T ss_dssp -CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT-----------------------TTHH
T ss_pred cccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc-----------------------ccHH
Confidence 345678999999999999999999996 5999999999999999887655421 1123
Q ss_pred hHHHHHhhCCCcccccCCCCCcchHHHHHHHhCcHHHHHHHHHhcCccccccccCCCChHHHHHHcCChHHHHHHHhccc
Q psy8763 298 PILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGE 377 (641)
Q Consensus 298 ~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~ 377 (641)
.++++|++.+. +++..+..|.||||.|+..++.++++.|+...+++++..+..|.||||+|+..++.+++++|+++|+
T Consensus 220 ~i~~lLl~~ga--d~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA 297 (337)
T 4g8k_A 220 AITHLLLDHGA--DVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA 297 (337)
T ss_dssp HHHHHHHHTTC--CTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSC
T ss_pred HHHHHHHHCCC--CCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 57788999988 5667788899999999999999999999977789999999999999999999999999999999998
Q ss_pred cccCChHHHhHHHhhcCChHHHHHHhcCCHHHHHHHHHCCCCCCCC
Q psy8763 378 SIGCSREEMISLFAAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQ 423 (641)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~ 423 (641)
+++ ..+||+.|++.++.+++++|+++|++++..
T Consensus 298 d~n-------------~~~~L~~A~~~~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 298 STD-------------CGDLVMTARRNYDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp SST-------------TCCHHHHHHHTTCHHHHHHHHHTTCCC---
T ss_pred CCC-------------CCCHHHHHHHcCCHHHHHHHHHCcCCCCCC
Confidence 763 456999999999999999999999998764
No 6
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4e-42 Score=324.33 Aligned_cols=263 Identities=22% Similarity=0.247 Sum_probs=235.1
Q ss_pred CcchHHHHHHHhCcHHHHHHHHHhcCcccccc-ccCCCChHHHHHHcCChHHHHHHHhccccccCChHHHhHHHhhcCCh
Q psy8763 318 HGRTALHIAAIYDFDECARILVKDFGASLKRA-CSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNL 396 (641)
Q Consensus 318 ~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~-~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~t 396 (641)
.|.++|+.|+..|+.+++++|+ +.+.+++.. +..|.||||+|+..++.+++++|++.|++++ ..+..|.|
T Consensus 4 ~g~~~L~~A~~~g~~~~v~~Ll-~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--------~~~~~g~t 74 (285)
T 1wdy_A 4 EDNHLLIKAVQNEDVDLVQQLL-EGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV--------LRKKNGAT 74 (285)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHH-HTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTT--------CCCTTCCC
T ss_pred ccchHHHHHHHcCCHHHHHHHH-HcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCc--------ccCCCCCC
Confidence 3778899999999999999998 667777766 6778899999999999999999999888754 34567889
Q ss_pred HHHHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccC----------CCCCC
Q psy8763 397 PLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNST----------DAQKM 466 (641)
Q Consensus 397 ~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~----------~~~~~ 466 (641)
|||+|+..|+.+++++|+++|++++..+..|.||||.|+..++.+++++|++.+.. ++.. +..|.
T Consensus 75 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~~~~~~~~~~~g~ 149 (285)
T 1wdy_A 75 PFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN-----VNLRRKTKEDQERLRKGGA 149 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCCCCHHHHHTTCCCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCC-----cccccccHHHHHhhccCCC
Confidence 99999999999999999999999999999999999999999999999999986544 3433 77899
Q ss_pred cHHHHHHhcCChhHHHHHHHc-CCCCCcCCCCCCCHHHHHHhcCC----HHHHHHHHHcCCCccccccCCCchhHHHhhc
Q psy8763 467 TPLHCAAMFDRCDVVQYLIDE-GADLNVLDKEKRSPLLLAASRGG----WKTVLTLVRNKANILLKDINRRNILHLLVLN 541 (641)
Q Consensus 467 t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~ 541 (641)
||||+|+..++.+++++|+++ |++++..+..|.||||+|+..++ .+++++|+++|++++.++..|.||||+|+..
T Consensus 150 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 229 (285)
T 1wdy_A 150 TALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEK 229 (285)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHT
T ss_pred cHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHc
Confidence 999999999999999999998 99999999999999999999998 8999999999999999999999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHhh-cCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCC
Q psy8763 542 GGGHIKEFAEEVAAVFLGENLIN-LGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESD 609 (641)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d 609 (641)
+ +.+++++|++ .|++++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|
T Consensus 230 ~------------~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~---~~~~d 283 (285)
T 1wdy_A 230 K------------HLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS---TDCGD 283 (285)
T ss_dssp T------------CHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSC---SCCSS
T ss_pred C------------CHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCC---CCccc
Confidence 9 9999999999 8999999999999999999999999999999999999 66665
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.6e-42 Score=323.94 Aligned_cols=262 Identities=22% Similarity=0.252 Sum_probs=212.7
Q ss_pred CCCcchhhHHHhcCCHHHHHHHHhcCCccccccC-CCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccC
Q psy8763 30 NKKQAVLHLATELNKVPILLILLQYKDMIDILQG-GEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRA 108 (641)
Q Consensus 30 ~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~ 108 (641)
..|.||||+|++.|+++++++|+++|++ ++.. +..|.||||+|+..|+.+++++|+++ |++++..
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~------------g~~~~~~ 68 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEGGAN--VNFQEEEGGWTPLHNAVQMSREDIVELLLRH------------GADPVLR 68 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHTTCC--TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT------------TCCTTCC
T ss_pred cccchHHHHHHHcCCHHHHHHHHHcCCC--cccccCCCCCcHHHHHHHcCCHHHHHHHHHc------------CCCCccc
Confidence 3588999999999999999999999974 4444 67899999999999999999999998 8999999
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcC------
Q psy8763 109 CSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQ------ 182 (641)
Q Consensus 109 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~------ 182 (641)
+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++.|++++..
T Consensus 69 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~ 140 (285)
T 1wdy_A 69 KKNGATPFLLAAIAGSVKLLKLFLSKGADV--------NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKED 140 (285)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCT--------TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--------CccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHH
Confidence 999999999999999999999999999987 456888999999999999999999999999999877
Q ss_pred ----CCCCCcHHHHHHHcCcHHHHHHHHhc-CCCccccccccCCCCCCcHHHHHHhcCc----HHHHHHHHHcCCCCCcc
Q psy8763 183 ----QFDLSTPVHLACSQGALDIVRLMFNL-QPSEKLVCLNSTDAQKMTPLHCAAMFDR----CDVVQYLIDEGADLNVL 253 (641)
Q Consensus 183 ----~~~~~t~l~~A~~~g~~~iv~~Ll~~-~~~~~~~~~~~~~~~~~t~L~~A~~~~~----~~iv~~Ll~~g~~~~~~ 253 (641)
+..|.||||+|+..|+.+++++|++. +.+ ++..+..|.|||++|+..++ .+++++|+++|++++..
T Consensus 141 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-----~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~ 215 (285)
T 1wdy_A 141 QERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-----VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVR 215 (285)
T ss_dssp HHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCC-----TTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCC
T ss_pred HHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCC-----CCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCc
Confidence 67788999999999999999999987 655 67778888999999998888 88888999988888766
Q ss_pred CCCCCCHHHHHHHcCCcccccccccccccCchhHHHHHHhcCChhHHHHHhhCCCcccccCCCCCcchHHHHHHHhCcHH
Q psy8763 254 DKEKRSPLLLAASRGGWKTNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDE 333 (641)
Q Consensus 254 ~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~ 333 (641)
+..|.||+ |+|+..++.+
T Consensus 216 ~~~g~t~L--------------------------------------------------------------~~A~~~~~~~ 233 (285)
T 1wdy_A 216 GERGKTPL--------------------------------------------------------------ILAVEKKHLG 233 (285)
T ss_dssp CTTSCCHH--------------------------------------------------------------HHHHHTTCHH
T ss_pred CCCCCcHH--------------------------------------------------------------HHHHHcCCHH
Confidence 65555544 4444445555
Q ss_pred HHHHHHHhcCccccccccCCCChHHHHHHcCChHHHHHHHhcccccc
Q psy8763 334 CARILVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIG 380 (641)
Q Consensus 334 ~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~ 380 (641)
++++|++..+++++..+..|.|||++|+..++.+++++|+++|++++
T Consensus 234 ~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~~ 280 (285)
T 1wdy_A 234 LVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280 (285)
T ss_dssp HHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSC
T ss_pred HHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCC
Confidence 55555543555555555556666666666666666666666665554
No 8
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.3e-41 Score=331.36 Aligned_cols=320 Identities=22% Similarity=0.286 Sum_probs=256.9
Q ss_pred eeeccCCCcccccccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcc
Q psy8763 15 RLIPSSSGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECD 94 (641)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~ 94 (641)
.+.+...+++.+..+..+.|+||.|++.|+.+.++.|+.... .+++..+..|.||||+|+..|+.++|++|+++
T Consensus 7 ~l~l~~~~~~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~-~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~----- 80 (351)
T 3utm_A 7 ALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLN-VNCHASDGRKSTPLHLAAGYNRVRIVQLLLQH----- 80 (351)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHCCTTT-TTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHT-----
T ss_pred hhhccCCceeeeeeccccchhHHHHHHcCCHHHHHHHHHhcC-CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHc-----
Confidence 334455778888899999999999999999999999998632 47788899999999999999999999999999
Q ss_pred hhHhhhcCCCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHH
Q psy8763 95 WIMVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLK 174 (641)
Q Consensus 95 ~~~~~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~ 174 (641)
|++++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++
T Consensus 81 -------g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~--------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 145 (351)
T 3utm_A 81 -------GADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV--------NAMDLWQFTPLHEAASKNRVEVCSLLLS 145 (351)
T ss_dssp -------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT--------TCCCTTCCCHHHHHHHTTCHHHHHHHHH
T ss_pred -------CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC--------CCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 9999999999999999999999999999999999987 4568899999999999999999999999
Q ss_pred cCCCCCcCCCCCCcHHHHH---------------------HHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHh
Q psy8763 175 SGAKISTQQFDLSTPVHLA---------------------CSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAM 233 (641)
Q Consensus 175 ~g~~~~~~~~~~~t~l~~A---------------------~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~ 233 (641)
+|++++..+..|.+|+++| +..++.+.++.++..... ....+..+.||||+|+.
T Consensus 146 ~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~t~L~~A~~ 220 (351)
T 3utm_A 146 HGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEII-----NFKQPQSHETALHCAVA 220 (351)
T ss_dssp TTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCT-----TCCCTTTCCCHHHHHHH
T ss_pred cCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcc-----cccCCCCCCCHHHHHHH
Confidence 9999999999999987765 556666666667665544 24456778899999998
Q ss_pred c---CcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCcccccccccccccCchhHHHHHHhcCChhHHHHHhhCCCcc
Q psy8763 234 F---DRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMI 310 (641)
Q Consensus 234 ~---~~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~ 310 (641)
. +..+++++|+++|++++..+..|.||||+|+..+ +.+++++|++.+.
T Consensus 221 ~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g---------------------------~~~~v~~Ll~~ga-- 271 (351)
T 3utm_A 221 SLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERA---------------------------HNDVMEVLHKHGA-- 271 (351)
T ss_dssp CCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT---------------------------CHHHHHHHHHTTC--
T ss_pred HhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcC---------------------------CHHHHHHHHHCCC--
Confidence 8 5578999999999999988888888777776554 8889999999887
Q ss_pred cccCCCCCcchHHHHHHHhCcHHHHHHHHHhcCccccccccCCCChHHHHHHcCChHHHHHHHhccccccCChHHHhHHH
Q psy8763 311 DILQGGEHGRTALHIAAIYDFDECARILVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLF 390 (641)
Q Consensus 311 ~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 390 (641)
+++..+..|.||||+|+..|+.+++++|+ +.|++++..+..|.||+++| ..+++++|.+.+.. .
T Consensus 272 ~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll-~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~-----------~ 335 (351)
T 3utm_A 272 KMNALDSLGQTALHRAALAGHLQTCRLLL-SYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPM-----------R 335 (351)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC---------------
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHH-HcCCCCCCcCCCCCChhhhh----hHHHHHHHHhcccc-----------c
Confidence 56667788999999999999999999999 77999999999999998887 56777777775542 2
Q ss_pred hhcCChHHHHHHhcC
Q psy8763 391 AAEGNLPLHSAVHGG 405 (641)
Q Consensus 391 ~~~~~t~l~~a~~~~ 405 (641)
...+.+++..|++.|
T Consensus 336 ~~~~~~~l~~A~~~g 350 (351)
T 3utm_A 336 TSDVDYRLLEASKAG 350 (351)
T ss_dssp ---------------
T ss_pred cCcceeehhhhhccC
Confidence 234556677776655
No 9
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=1.7e-42 Score=337.20 Aligned_cols=322 Identities=19% Similarity=0.187 Sum_probs=197.3
Q ss_pred ChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHh
Q psy8763 154 NLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAM 233 (641)
Q Consensus 154 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~ 233 (641)
..+|..++..|+.+.+..++++...+. .-.+++.-+...|+.+++++++. ...+..|.||||+|+.
T Consensus 38 ~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~----------~~~~~~g~t~L~~Aa~ 103 (373)
T 2fo1_E 38 QHSLLEASYDGYIKRQRNELQHYSLYP----NPQGYGNGNDFLGDFNHTNLQIP----------TEPEPESPIKLHTEAA 103 (373)
T ss_dssp ----------------------------------------------------------------------CCCHHHHHHH
T ss_pred ccccccccCCccccchhhhhhhhcccc----CccccCCCCCccccccccccccc----------cCCCCCCccHHHHHhc
Confidence 345666667777777777776655442 11244555666677777777653 3345567777777777
Q ss_pred cCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCcccccccccccccCchhHHHHHHhcCChhHHHHHhhCCCccccc
Q psy8763 234 FDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDIL 313 (641)
Q Consensus 234 ~~~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~ 313 (641)
.+. +++++|+. .+++..+
T Consensus 104 ~~~-~~~~~L~~--~~~n~~d----------------------------------------------------------- 121 (373)
T 2fo1_E 104 GSY-AITEPITR--ESVNIID----------------------------------------------------------- 121 (373)
T ss_dssp SSS-CCCSCCST--TTTTTCC-----------------------------------------------------------
T ss_pred CCc-hHHHHhcc--ccccccC-----------------------------------------------------------
Confidence 443 55555543 2333322
Q ss_pred CCCCCcchHHHHHHHhCcHHHHHHHHHhcCccccccccCCCChHHHHHHcCChHHHHHHHhccccccCChHHHhHHHhhc
Q psy8763 314 QGGEHGRTALHIAAIYDFDECARILVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAE 393 (641)
Q Consensus 314 ~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~ 393 (641)
+..|.||||+|+..|+.+++++|+. ..++.|++.|++++ ..+..
T Consensus 122 --~~~g~t~Lh~Aa~~g~~~~v~~Ll~--------------------------~~~~~ll~~ga~vn--------~~d~~ 165 (373)
T 2fo1_E 122 --PRHNRTVLHWIASNSSAEKSEDLIV--------------------------HEAKECIAAGADVN--------AMDCD 165 (373)
T ss_dssp --CSSCCCHHHHHHCTTCCSCCTTHHH--------------------------HHHHHHHHTCCCTT--------CCCTT
T ss_pred --CcCCCCHHHHHHHCCCHHHHHHHHH--------------------------HHHHHHHhcCCCCc--------CCCCC
Confidence 1234555555555555555555542 12344555555533 23456
Q ss_pred CChHHHHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHH
Q psy8763 394 GNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAA 473 (641)
Q Consensus 394 ~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~ 473 (641)
|.||||+|+..|+.+++++|++.|++++..+..|.||||.|+..|+.+++++|++.+. ...+++..+..|.||||+|+
T Consensus 166 g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~--~~~~~~~~d~~g~t~L~~A~ 243 (373)
T 2fo1_E 166 ENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTK--LKGDIEELDRNGMTALMIVA 243 (373)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHH--HHHTTSCCCTTSCCHHHHHH
T ss_pred CCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCc--cccChhhcCCCCCCHHHHHH
Confidence 7777777777788888888888888888888888888888888888888888887431 01457778888888888888
Q ss_pred hcC---ChhHHHHHHHcCCCCCc--------CCCCCCCHHHHHHhcCCHHHHHHHHHcC-CCccccccCCCchhHHHhhc
Q psy8763 474 MFD---RCDVVQYLIDEGADLNV--------LDKEKRSPLLLAASRGGWKTVLTLVRNK-ANILLKDINRRNILHLLVLN 541 (641)
Q Consensus 474 ~~~---~~~~v~~Ll~~g~~~~~--------~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~a~~~ 541 (641)
..+ +.+++++|+++|++++. .+..|.||||+|+..|+.+++++|++++ ++++.+|..|.||||+|+..
T Consensus 244 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~ 323 (373)
T 2fo1_E 244 HNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQE 323 (373)
T ss_dssp HSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHH
T ss_pred HhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHc
Confidence 887 78888888888888876 4667888888888888888888888875 88888888888888888888
Q ss_pred CCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCC
Q psy8763 542 GGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERG 601 (641)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 601 (641)
+ +.+++++|+++|++++.+|..|.|||++|+.+|+.++|++|+++|++
T Consensus 324 g------------~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~ 371 (373)
T 2fo1_E 324 G------------RIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE 371 (373)
T ss_dssp T------------CHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred C------------CHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 8 88888888888888888888888888888888888888888888875
No 10
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=9e-43 Score=339.20 Aligned_cols=264 Identities=19% Similarity=0.254 Sum_probs=225.4
Q ss_pred CCCcchHHHHHHHhCcHHHHHHHHHhcCccccccc-cCCCChHHHHHHcCChHHHHHHHhccccccCChHHHhHHHhhcC
Q psy8763 316 GEHGRTALHIAAIYDFDECARILVKDFGASLKRAC-SNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEG 394 (641)
Q Consensus 316 ~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 394 (641)
+..|.|+||.|+..+. +++++|+ ..+++..+ ..|.||||+|+..++.+++++|+.
T Consensus 91 ~~~g~t~L~~Aa~~~~-~~~~~L~---~~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~-------------------- 146 (373)
T 2fo1_E 91 EPESPIKLHTEAAGSY-AITEPIT---RESVNIIDPRHNRTVLHWIASNSSAEKSEDLIV-------------------- 146 (373)
T ss_dssp ---CCCHHHHHHHSSS-CCCSCCS---TTTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHH--------------------
T ss_pred CCCCccHHHHHhcCCc-hHHHHhc---cccccccCCcCCCCHHHHHHHCCCHHHHHHHHH--------------------
Confidence 3456677777776443 5555554 23445555 456666666666666666665554
Q ss_pred ChHHHHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHh
Q psy8763 395 NLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAM 474 (641)
Q Consensus 395 ~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~~ 474 (641)
..++.|++.|++++..+..|.||||+|+..|+.+++++|++.+ .+++..+..|.||||+|+.
T Consensus 147 -------------~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~g-----a~~~~~~~~g~t~L~~A~~ 208 (373)
T 2fo1_E 147 -------------HEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAG-----ADPTIYNKSERSALHQAAA 208 (373)
T ss_dssp -------------HHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCSCCCCTTCCCHHHHHHH
T ss_pred -------------HHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCC-----CCCcccCCCCCCHHHHHHH
Confidence 1235567999999999999999999999999999999999954 4478899999999999999
Q ss_pred cCChhHHHHHHHcC---CCCCcCCCCCCCHHHHHHhcC---CHHHHHHHHHcCCCccc--------cccCCCchhHHHhh
Q psy8763 475 FDRCDVVQYLIDEG---ADLNVLDKEKRSPLLLAASRG---GWKTVLTLVRNKANILL--------KDINRRNILHLLVL 540 (641)
Q Consensus 475 ~~~~~~v~~Ll~~g---~~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~g~~~~~--------~~~~g~t~l~~a~~ 540 (641)
.++.+++++|+++| ++++..+..|.||||+|+..+ +.+++++|+++|++++. .+..|.||||+|+.
T Consensus 209 ~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~ 288 (373)
T 2fo1_E 209 NRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQ 288 (373)
T ss_dssp TTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHS
T ss_pred CCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHH
Confidence 99999999999998 899999999999999999988 89999999999999986 56789999999999
Q ss_pred cCCCchhhHHHHHHHHHHHHHHhhcC-CcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHH
Q psy8763 541 NGGGHIKEFAEEVAAVFLGENLINLG-ACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIA 619 (641)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A 619 (641)
.+ +.+++++|+++| ++++.+|..|.||||+|+..|+.++|++|+++|++ ++..|..|+|||++|
T Consensus 289 ~g------------~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad---~~~~d~~g~t~l~~A 353 (373)
T 2fo1_E 289 VS------------NMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS---VEAVDATDHTARQLA 353 (373)
T ss_dssp SC------------CHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---SSCCCSSSCCHHHHH
T ss_pred hC------------CHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccCCCCCCCCHHHHH
Confidence 99 999999999887 99999999999999999999999999999999999 899999999999999
Q ss_pred HhhCCcceeeeceeeee
Q psy8763 620 SKEGFHYSVSIFQVTYV 636 (641)
Q Consensus 620 ~~~~~~~~~~~l~~~~~ 636 (641)
+..|+.+++++|+++.+
T Consensus 354 ~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 354 QANNHHNIVDIFDRCRP 370 (373)
T ss_dssp HHTTCHHHHHHHHTTC-
T ss_pred HHcCCHHHHHHHHhcCc
Confidence 99999999999988754
No 11
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.6e-42 Score=316.49 Aligned_cols=233 Identities=27% Similarity=0.287 Sum_probs=184.7
Q ss_pred hHHHhhcCChHHHHHHhcC-------------CHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q psy8763 387 ISLFAAEGNLPLHSAVHGG-------------DFKAVELCLKSGAKIST-QQFDLSTPVHLACSQGALDIVRLMFNLQPS 452 (641)
Q Consensus 387 ~~~~~~~~~t~l~~a~~~~-------------~~~~~~~Ll~~g~~~~~-~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~ 452 (641)
++..+..|.||||+|+..| +.+++++|++.|++++. .+..|.||||.|+..|+.+++++|++.+
T Consensus 3 vn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g-- 80 (253)
T 1yyh_A 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEAS-- 80 (253)
T ss_dssp -------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT--
T ss_pred CCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC--
Confidence 4567889999999999977 89999999999999865 4789999999999999999999999954
Q ss_pred ccccccccCCCCCCcHHHHHHhcCChhHHHHHHHcCC-CCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCC
Q psy8763 453 EKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGA-DLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINR 531 (641)
Q Consensus 453 ~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g 531 (641)
.+++..+..|.||||+|+..++.+++++|+++|+ +++..+..|.||||+|+..++.+++++|+++|++++.+|..|
T Consensus 81 ---~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g 157 (253)
T 1yyh_A 81 ---ADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG 157 (253)
T ss_dssp ---CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTS
T ss_pred ---CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCC
Confidence 4478899999999999999999999999999987 999999999999999999999999999999999999999999
Q ss_pred CchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCC
Q psy8763 532 RNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGE 611 (641)
Q Consensus 532 ~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~ 611 (641)
.||||+|+..+ +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..|..
T Consensus 158 ~t~L~~A~~~~------------~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~ 222 (253)
T 1yyh_A 158 KSALHWAAAVN------------NVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN---RDITDHM 222 (253)
T ss_dssp CBHHHHHHHHT------------CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTT
T ss_pred CCHHHHHHHcC------------CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC---ccccccC
Confidence 99999999999 99999999999999999999999999999999999999999999999 8999999
Q ss_pred CChhHHHHHhhCCcceeeeceeeeeccc
Q psy8763 612 GLTPLHIASKEGFHYSVSIFQVTYVWCS 639 (641)
Q Consensus 612 g~t~l~~A~~~~~~~~~~~l~~~~~~~~ 639 (641)
|+|||++|+..|+.+++++|....++++
T Consensus 223 g~tpl~~A~~~g~~~i~~~l~~~~~~~~ 250 (253)
T 1yyh_A 223 DRLPRDIAQERMHHDIVRLLDLEHHHHH 250 (253)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHC------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHHhhhcc
Confidence 9999999999999999999999877764
No 12
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=3.1e-41 Score=311.65 Aligned_cols=207 Identities=22% Similarity=0.301 Sum_probs=194.3
Q ss_pred CCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCC
Q psy8763 31 KKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACS 110 (641)
Q Consensus 31 ~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~ 110 (641)
.|+||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+..|+.+++++|+++ |++++..+.
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~------------g~~~~~~~~ 67 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGW--AVNIITADHVSPLHEACLGGHLSCVKILLKH------------GAQVNGVTA 67 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTC--CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT------------TCCTTCCCT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHC------------CCCCCCCCC
Confidence 58999999999999999999999997 6778889999999999999999999999999 999999999
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHH
Q psy8763 111 NGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPV 190 (641)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l 190 (641)
.|.||||+|+..|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|++.|++++..+..|.|||
T Consensus 68 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~---------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 138 (261)
T 2xai_A 68 DWHTPLFNACVSGSWDCVNLLLQHGASVQP---------ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPL 138 (261)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCSSC---------SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCCC---------CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHH
Confidence 999999999999999999999999998742 45689999999999999999999999999999999999999
Q ss_pred HHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Q psy8763 191 HLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAAS 266 (641)
Q Consensus 191 ~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~ 266 (641)
|+|+..|+.+++++|++++++ ++. +..|.||||+|+..++.+++++|+++|++++..+..|.||+++|+.
T Consensus 139 ~~A~~~~~~~~v~~Ll~~g~~-----~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~ 208 (261)
T 2xai_A 139 YLACENQQRACVKKLLESGAD-----VNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPP 208 (261)
T ss_dssp HHHHHTTCHHHHHHHHHHTCC-----TTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT
T ss_pred HHHHHhCCHHHHHHHHHcCCC-----CCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhccc
Confidence 999999999999999999988 453 7789999999999999999999999999999999999999998863
No 13
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=316.73 Aligned_cols=222 Identities=24% Similarity=0.264 Sum_probs=209.7
Q ss_pred HHhhcCChHHHHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcH
Q psy8763 389 LFAAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTP 468 (641)
Q Consensus 389 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~ 468 (641)
..+..|.||||.|+..|+.+++++|++.|++++..+..|.||||.|+..|+.+++++|++.+ .+++..+..|.||
T Consensus 54 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~g~t~ 128 (285)
T 3d9h_A 54 GDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHG-----AQVNGVTADWHTP 128 (285)
T ss_dssp SSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCSSCCCTTCCCH
T ss_pred CCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC-----CCCCCCCCCCCCH
Confidence 45678999999999999999999999999999999999999999999999999999999954 4478899999999
Q ss_pred HHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhh
Q psy8763 469 LHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKE 548 (641)
Q Consensus 469 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~ 548 (641)
||+|+..++.+++++|+++|++++.. ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~------ 201 (285)
T 3d9h_A 129 LFNACVSGSWDCVNLLLQHGASVQPE-SDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ------ 201 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCS-CTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTT------
T ss_pred HHHHHHcCHHHHHHHHHHCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC------
Confidence 99999999999999999999999865 45999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHhhCCccee
Q psy8763 549 FAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFHYSV 628 (641)
Q Consensus 549 ~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~~~~~~~~ 628 (641)
+.+++++|+++|++++. +..|.||||+|+..|+.++|++|+++|++ ++.+|..|+|||++|+ ++.+++
T Consensus 202 ------~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad---~~~~d~~g~t~l~~A~--~~~~~~ 269 (285)
T 3d9h_A 202 ------QRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGAD---TQAKNAEGKRPVELVP--PESPLA 269 (285)
T ss_dssp ------CHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCGGGGSC--TTSHHH
T ss_pred ------cHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHhc--CccHHH
Confidence 99999999999999994 89999999999999999999999999999 8999999999999999 456899
Q ss_pred eeceee
Q psy8763 629 SIFQVT 634 (641)
Q Consensus 629 ~~l~~~ 634 (641)
++|++.
T Consensus 270 ~~Ll~~ 275 (285)
T 3d9h_A 270 QLFLER 275 (285)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998876
No 14
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=9.5e-42 Score=332.60 Aligned_cols=277 Identities=21% Similarity=0.219 Sum_probs=230.8
Q ss_pred CCcccccccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhh
Q psy8763 21 SGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKD 100 (641)
Q Consensus 21 ~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 100 (641)
.+.+.+..|..|+||||+|+..|++++|++|+++|+ +++..+..|.||||+|+..|+.++|++|+++
T Consensus 9 ~~~~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~----------- 75 (364)
T 3ljn_A 9 PKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGV--SPTIQNRFGCTALHLACKFGCVDTAKYLASV----------- 75 (364)
T ss_dssp -------CCHHHHHHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHHCCHHHHHHHHHH-----------
T ss_pred cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC--CccccCCCCCcHHHHHHHcCCHHHHHHHHHC-----------
Confidence 567888999999999999999999999999999997 6678899999999999999999999999999
Q ss_pred cCCCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhh-------------hhccccCCCChHHHHHHhCC--C
Q psy8763 101 FGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREE-------------MISLFDAEGNLPLHSAVHGG--D 165 (641)
Q Consensus 101 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-------------~~~~~~~~~~t~L~~A~~~g--~ 165 (641)
|++++. ..|.||||+|+..|+.+++++|++++.+.+..... ..+..+..|.||||+|+..| +
T Consensus 76 -g~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~ 152 (364)
T 3ljn_A 76 -GEVHSL--WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEY 152 (364)
T ss_dssp -CCCCCC--BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGG
T ss_pred -CCCccc--cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCch
Confidence 664443 57999999999999999999999994332222221 12236788999999999999 9
Q ss_pred HHHHHHHHHcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHH
Q psy8763 166 FKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLID 245 (641)
Q Consensus 166 ~~~v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~ 245 (641)
.++|++|+++|++++..+..|.||||+|+..|+.+++++|++++++.....++..+..|.||||+|+..|+.+++++|++
T Consensus 153 ~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 232 (364)
T 3ljn_A 153 LEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVE 232 (364)
T ss_dssp HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHT
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999885544468889999999999999999999999999
Q ss_pred cCCCCCccCCCCCCHHHHHHHcCCcccccccccccccCchhHHHHHHhcCChhHHHHHhhCCCcccccC----------C
Q psy8763 246 EGADLNVLDKEKRSPLLLAASRGGWKTNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQ----------G 315 (641)
Q Consensus 246 ~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~----------~ 315 (641)
+|++++..+..|.|||++|+..+ +.+++++|++.+....... .
T Consensus 233 ~gad~~~~d~~g~tpL~~A~~~g---------------------------~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 285 (364)
T 3ljn_A 233 MGIDVNMEDNEHTVPLYLSVRAA---------------------------MVLLTKELLQKTDVFLIQACPYHNGTTVLP 285 (364)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTC---------------------------CHHHHHHHHHHSCHHHHHTCTTBSSSSBCG
T ss_pred cCCCCCCCCCCCCCHHHHHHHhC---------------------------hHHHHHHHHHcCCchhhhcCcccCcccccc
Confidence 99999999999998888877655 8999999999876432211 3
Q ss_pred CCCcchHHHHHHHhCcHHHHHHHHH
Q psy8763 316 GEHGRTALHIAAIYDFDECARILVK 340 (641)
Q Consensus 316 ~~~~~~~l~~a~~~~~~~~~~~Ll~ 340 (641)
+..++++++.|+..++.+.+..|+.
T Consensus 286 ~~~~~~~l~~aa~~~~~~~v~~ll~ 310 (364)
T 3ljn_A 286 DRVVWLDFVPAAADPSKQEVLQLLQ 310 (364)
T ss_dssp GGCCCCTTSCSSCCHHHHHHHHHHH
T ss_pred cccccccchhhhhccCHHHHHHHHH
Confidence 4456677777777776666666663
No 15
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=6.7e-41 Score=308.05 Aligned_cols=233 Identities=18% Similarity=0.199 Sum_probs=181.0
Q ss_pred cccccccCCCcchhhHHHhcC-------------CHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhc
Q psy8763 23 VNTRILNNKKQAVLHLATELN-------------KVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSE 89 (641)
Q Consensus 23 ~~~~~~~~~~~t~L~~A~~~g-------------~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ 89 (641)
+|+|.+|..|+||||+|+..| +.+++++|++.|+.+. +..+..|.||||+|+..|+.++|++|+++
T Consensus 1 ~dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ 79 (253)
T 1yyh_A 1 MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLH-NQTDRTGETALHLAARYSRSDAAKRLLEA 79 (253)
T ss_dssp ----------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CCCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcc-cccCCCCCcHHHHHHHcCCHHHHHHHHHc
Confidence 478999999999999999988 9999999999998542 34578999999999999999999999999
Q ss_pred CCCcchhHhhhcCCCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcc-cCCCchhhhhccccCCCChHHHHHHhCCCHHH
Q psy8763 90 QPECDWIMVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGE-SIGCSREEMISLFDAEGNLPLHSAVHGGDFKA 168 (641)
Q Consensus 90 ~~~~~~~~~~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~-~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~ 168 (641)
|++++..+..|.||||+|+..|+.+++++|+++++ ++ +..+..|.||||+|+..|+.++
T Consensus 80 ------------g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~--------~~~~~~g~t~L~~A~~~~~~~~ 139 (253)
T 1yyh_A 80 ------------SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDL--------DARMHDGTTPLILAARLAVEGM 139 (253)
T ss_dssp ------------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCT--------TCCCTTCCCHHHHHHHHTCSSH
T ss_pred ------------CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCc--------cccCCCCCcHHHHHHHcChHHH
Confidence 99999999999999999999999999999999987 44 5678899999999999999999
Q ss_pred HHHHHHcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHcCC
Q psy8763 169 VELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGA 248 (641)
Q Consensus 169 v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~ 248 (641)
+++|++.|++++..+..|.||||+|+..|+.+++++|++++++ ++..+..|.||||+|+..|+.+++++|+++|+
T Consensus 140 v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga 214 (253)
T 1yyh_A 140 LEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN-----KDMQNNREETPLFLAAREGSYETAKVLLDHFA 214 (253)
T ss_dssp HHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred HHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 9999999999999999999999999999999999999999988 68889999999999999999999999999999
Q ss_pred CCCccCCCCCCHHHHHHHcCCcccccccccccccCchhHHHHHHhcCChhHHHHHhhCCC
Q psy8763 249 DLNVLDKEKRSPLLLAASRGGWKTNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKD 308 (641)
Q Consensus 249 ~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~ 308 (641)
+++..+..|.||+++|+..+ +.+++++|.....
T Consensus 215 ~~~~~d~~g~tpl~~A~~~g---------------------------~~~i~~~l~~~~~ 247 (253)
T 1yyh_A 215 NRDITDHMDRLPRDIAQERM---------------------------HHDIVRLLDLEHH 247 (253)
T ss_dssp CTTCCCTTCCCHHHHHHHTT---------------------------CHHHHHHHHC---
T ss_pred CccccccCCCCHHHHHHHcC---------------------------CHHHHHHHHHHhh
Confidence 99999999999888887665 8899999987665
No 16
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=310.47 Aligned_cols=262 Identities=23% Similarity=0.308 Sum_probs=173.8
Q ss_pred ccccCCCcchhhHHHhcCCHHHHHHHHhcCCc---------cccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchh
Q psy8763 26 RILNNKKQAVLHLATELNKVPILLILLQYKDM---------IDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWI 96 (641)
Q Consensus 26 ~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~---------~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~ 96 (641)
......|.|+||+|+..|+.+.+..++..+.. -.++.++..|+||||+|+..|+.+++++|+++
T Consensus 9 ~~~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~------- 81 (285)
T 3d9h_A 9 HHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQ------- 81 (285)
T ss_dssp ---------------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHT-------
T ss_pred cccchHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHC-------
Confidence 34566788899999998887777776554321 12456678888999999999999999999888
Q ss_pred HhhhcCCCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcC
Q psy8763 97 MVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSG 176 (641)
Q Consensus 97 ~~~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g 176 (641)
|++++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++.|
T Consensus 82 -----g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~--------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 148 (285)
T 3d9h_A 82 -----GWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV--------NGVTADWHTPLFNACVSGSWDCVNLLLQHG 148 (285)
T ss_dssp -----TCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS--------SCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred -----CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC--------CCCCCCCCCHHHHHHHcCHHHHHHHHHHCC
Confidence 8888888888889999999989999999998888886 456788888999999888889999888888
Q ss_pred CCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCccCCC
Q psy8763 177 AKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKE 256 (641)
Q Consensus 177 ~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~ 256 (641)
++++..+ .|.||||+|+..|+.+++++|++++++ ++..+..|.|||++|+..|+.+++++|+++|++++. +..
T Consensus 149 ~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~ 221 (285)
T 3d9h_A 149 ASVQPES-DLASPIHEAARRGHVECVNSLIAYGGN-----IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKG 221 (285)
T ss_dssp CCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBT
T ss_pred CCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCC
Confidence 8887544 488888888888888888888888877 577888888888888888888888888888887762 333
Q ss_pred CCCHHHHHHHcCCcccccccccccccCchhHHHHHHhcCChhHHHHHhhCCCcccccCCCCCcchHHHHHHHhCcHHHHH
Q psy8763 257 KRSPLLLAASRGGWKTNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECAR 336 (641)
Q Consensus 257 ~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~ 336 (641)
|.||||+|+..++.++++
T Consensus 222 --------------------------------------------------------------g~t~L~~A~~~~~~~~v~ 239 (285)
T 3d9h_A 222 --------------------------------------------------------------QDSPLHAVVRTASEELAC 239 (285)
T ss_dssp --------------------------------------------------------------TBCHHHHHHHTTCHHHHH
T ss_pred --------------------------------------------------------------CCCHHHHHHHcCCHHHHH
Confidence 445555555555556666
Q ss_pred HHHHhcCccccccccCCCChHHHHHHcCChHHHHHHHhc-cccc
Q psy8763 337 ILVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQF-GESI 379 (641)
Q Consensus 337 ~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~-~~~~ 379 (641)
+|+ +.|++++.++..|.|||++|+ ++.+++++|+++ ++++
T Consensus 240 ~Ll-~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l 280 (285)
T 3d9h_A 240 LLM-DFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREGASL 280 (285)
T ss_dssp HHH-HTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC----
T ss_pred HHH-HCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCC
Confidence 666 445666666666666666665 334556666655 4443
No 17
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=8.6e-41 Score=308.69 Aligned_cols=250 Identities=23% Similarity=0.324 Sum_probs=223.9
Q ss_pred CCCChHHHHHHcCChHHHHHHHhccccccCChHHHhHHHhhcCChHHHHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Q psy8763 352 NGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPV 431 (641)
Q Consensus 352 ~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l 431 (641)
+|.||||.|+..|+.+++++|++.|++++ ..+..|.||||+|+..|+.+++++|++.|++++..+..|.|||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L 73 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQGWAVN--------IITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPL 73 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCSS--------CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCCCCCC--------CcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHH
Confidence 57899999999999999999999988754 4456899999999999999999999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCH
Q psy8763 432 HLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGW 511 (641)
Q Consensus 432 ~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 511 (641)
|.|+..|+.+++++|++.+.+ ++ .+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..++.
T Consensus 74 ~~A~~~~~~~~v~~Ll~~g~~-----~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 147 (261)
T 2xai_A 74 FNACVSGSWDCVNLLLQHGAS-----VQ-PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQR 147 (261)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC-----SS-CSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHHHHHCCCC-----CC-CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCH
Confidence 999999999999999996654 33 345699999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHH
Q psy8763 512 KTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNT 591 (641)
Q Consensus 512 ~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 591 (641)
+++++|+++|++++. +..|.||||+|+..+ +.+++++|+++|++++.+|..|+||||+|+.+ .++
T Consensus 148 ~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~------------~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~~~--~~~ 212 (261)
T 2xai_A 148 ACVKKLLESGADVNQ-GKGQDSPLHAVARTA------------SEELACLLMDFGADTQAKNAEGKRPVELVPPE--SPL 212 (261)
T ss_dssp HHHHHHHHHTCCTTC-CBTTBCHHHHHHHHT------------CHHHHHHHHHTTCCTTCCCTTSCCGGGGSCTT--CTH
T ss_pred HHHHHHHHcCCCCCC-CCCCCChHHHHHHcC------------CHHHHHHHHHcCCCCCCcCCCCCChhhhcccc--ccH
Confidence 999999999999995 889999999999999 99999999999999999999999999999965 469
Q ss_pred HHHHHhcCCCcc-----ccccCCCCCChhHHHHHhhCCcceeee
Q psy8763 592 VKKLLSSERGSF-----IINESDGEGLTPLHIASKEGFHYSVSI 630 (641)
Q Consensus 592 v~~Ll~~g~~~~-----~~~~~d~~g~t~l~~A~~~~~~~~~~~ 630 (641)
+++|++.++.+. .++++|..|.||+++|.+....+.++-
T Consensus 213 ~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~~~~p~~l~~ 256 (261)
T 2xai_A 213 AQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLVLPEDLKQ 256 (261)
T ss_dssp HHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGGSSSCHHHHH
T ss_pred HHHHHhccCCccHHHHHHHHHHHHhchhccccCcccCCcHHHHH
Confidence 999999987531 256789999999999998776555443
No 18
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.5e-39 Score=296.86 Aligned_cols=219 Identities=26% Similarity=0.334 Sum_probs=207.7
Q ss_pred cccccccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcC
Q psy8763 23 VNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFG 102 (641)
Q Consensus 23 ~~~~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g 102 (641)
+|++..|..|+||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+..|+.+++++|+++ |
T Consensus 2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------g 67 (237)
T 3b7b_A 2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGA--NIDTCSEDQRTPLMEAAENNHLEAVKYLIKA------------G 67 (237)
T ss_dssp CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT------------T
T ss_pred CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCC--CcCccCCCCCCHHHHHHHhCCHHHHHHHHhC------------C
Confidence 5788999999999999999999999999999997 5667788999999999999999999999999 9
Q ss_pred CCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhc-ccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCc
Q psy8763 103 ASLKRACSNGYYPIHDAAKNASSKTMEVFLQFG-ESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKIST 181 (641)
Q Consensus 103 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 181 (641)
++++..+..|.||||.|+..|+.+++++|++.+ .++ +..+..|.||||+|+..|+.+++++|++.|++++.
T Consensus 68 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~--------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~ 139 (237)
T 3b7b_A 68 ALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDV--------NCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINI 139 (237)
T ss_dssp CCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCT--------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCc--------ccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc
Confidence 999999999999999999999999999999998 554 45688899999999999999999999999999999
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCccCCCCCCHH
Q psy8763 182 QQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPL 261 (641)
Q Consensus 182 ~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~t~l 261 (641)
++..|.||||+|+..|+.+++++|++++++ ++..+..|.||||+|+..++.+++++|+++|++++..+..|.||+
T Consensus 140 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l 214 (237)
T 3b7b_A 140 RDNEENICLHWAAFSGCVDIAEILLAAKCD-----LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPL 214 (237)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHTTTCC-----TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHH
Confidence 999999999999999999999999999988 688899999999999999999999999999999999999999999
Q ss_pred HHHHHcC
Q psy8763 262 LLAASRG 268 (641)
Q Consensus 262 ~~a~~~~ 268 (641)
++|+..+
T Consensus 215 ~~A~~~~ 221 (237)
T 3b7b_A 215 QCASLNS 221 (237)
T ss_dssp HHSCTTC
T ss_pred HHHHHHH
Confidence 9987766
No 19
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.6e-40 Score=301.42 Aligned_cols=227 Identities=25% Similarity=0.245 Sum_probs=211.1
Q ss_pred HHHhhcCChHHHHHHhcCCHHHHHHHHH----CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCC
Q psy8763 388 SLFAAEGNLPLHSAVHGGDFKAVELCLK----SGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDA 463 (641)
Q Consensus 388 ~~~~~~~~t~l~~a~~~~~~~~~~~Ll~----~g~~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~ 463 (641)
+..+..|.||||.|+..|+.+++++|++ .|.+++..+..|.||||.|+..|+.+++++|++.+. +++..+.
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~ 77 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA-----SPMALDR 77 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCT
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCC-----CccccCC
Confidence 4567899999999999999999999997 899999999999999999999999999999999554 4788899
Q ss_pred CCCcHHHHHHhcCChhHHHHHHHcCC----CCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccc-cCCCchhHHH
Q psy8763 464 QKMTPLHCAAMFDRCDVVQYLIDEGA----DLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKD-INRRNILHLL 538 (641)
Q Consensus 464 ~~~t~L~~A~~~~~~~~v~~Ll~~g~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~a 538 (641)
.|.||||+|+..++.+++++|+++|+ +++..+..|.||||+|+..++.+++++|+++|++++..+ ..|.||||+|
T Consensus 78 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A 157 (241)
T 1k1a_A 78 HGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHA 157 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHH
Confidence 99999999999999999999999987 889999999999999999999999999999999999998 8899999999
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHH
Q psy8763 539 VLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHI 618 (641)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~ 618 (641)
+..+ +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|+|||++
T Consensus 158 ~~~~------------~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~ 222 (241)
T 1k1a_A 158 VENN------------SLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD---SSLKNCHNDTPLMV 222 (241)
T ss_dssp HHTT------------CHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCTTTT
T ss_pred HHcC------------CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCC---CCCcCCCCCCHHHH
Confidence 9999 99999999999999999999999999999999999999999999999 89999999999999
Q ss_pred HHhhCCcceeeeceee
Q psy8763 619 ASKEGFHYSVSIFQVT 634 (641)
Q Consensus 619 A~~~~~~~~~~~l~~~ 634 (641)
|+..|+.++++.|.+.
T Consensus 223 A~~~~~~~i~~~l~~~ 238 (241)
T 1k1a_A 223 ARSRRVIDILRGKATR 238 (241)
T ss_dssp CSSHHHHHHHTC----
T ss_pred HHhcCcHHHHhhhccC
Confidence 9999999999998764
No 20
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=9.7e-40 Score=307.20 Aligned_cols=228 Identities=25% Similarity=0.240 Sum_probs=196.0
Q ss_pred cccccCCCcchhhHHHhcCCHHHHHHHHhcCCccc-cccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCC
Q psy8763 25 TRILNNKKQAVLHLATELNKVPILLILLQYKDMID-ILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGA 103 (641)
Q Consensus 25 ~~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~-~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~ 103 (641)
++.+|..|+||||+|++.|+.++|++|+++|+.+. ++..+..|.||||+|+..|+.++|++|+++ |+
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~------------ga 69 (282)
T 1oy3_D 2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAA------------GA 69 (282)
T ss_dssp CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHT------------TC
T ss_pred CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHc------------CC
Confidence 46789999999999999999999999999998543 778889999999999999999999999999 99
Q ss_pred CcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCch---------------------------------------hh
Q psy8763 104 SLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSR---------------------------------------EE 144 (641)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~---------------------------------------~~ 144 (641)
+++..+..|.||||+|+..|+.+++++|++++++..... ..
T Consensus 70 ~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (282)
T 1oy3_D 70 GVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRL 149 (282)
T ss_dssp CSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGG
T ss_pred CCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhh
Confidence 999999999999999999999999999999887643211 11
Q ss_pred hhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCC-CCcHHHHHHHcCcHHHHHHHHhcCCCccccccccCCCC
Q psy8763 145 MISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFD-LSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQ 223 (641)
Q Consensus 145 ~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~ 223 (641)
.++..+..|.||||+|+..|+.++|++|+++|++++..+.. |.||||+|+..|+.+++++|++++++ ++.++..
T Consensus 150 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad-----~~~~d~~ 224 (282)
T 1oy3_D 150 QLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD-----PTARMYG 224 (282)
T ss_dssp GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTT
T ss_pred cCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-----CcccccC
Confidence 24667889999999999999999999999999999998854 99999999999999999999999988 6889999
Q ss_pred CCcHHHHHHhcCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Q psy8763 224 KMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGG 269 (641)
Q Consensus 224 ~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~ 269 (641)
|.||||+|+..++.+++++|+++|++++..+..|.||++++.....
T Consensus 225 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 225 GRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp SCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC---------------
T ss_pred CCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCCccc
Confidence 9999999999999999999999999999999999999999987654
No 21
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=4.5e-41 Score=327.82 Aligned_cols=277 Identities=18% Similarity=0.185 Sum_probs=201.5
Q ss_pred cccCCCCCcchHHHHHHHhCcHHHHHHHHHhcCccccccccCCCChHHHHHHcCChHHHHHHHhccccccCChHHHhHHH
Q psy8763 311 DILQGGEHGRTALHIAAIYDFDECARILVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLF 390 (641)
Q Consensus 311 ~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~ 390 (641)
+....+..|.||||+|+..|+.+++++|+ +.+++++..+..|.||||+|+..++.+++++|+++|++++.
T Consensus 12 ~~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll-~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--------- 81 (364)
T 3ljn_A 12 NRIKSDDENMEKIHVAARKGQTDEVRRLI-ETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--------- 81 (364)
T ss_dssp ----CCHHHHHHHHHHHHHTCHHHHHHHH-HTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC---------
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc---------
Confidence 34444555666666666666666666666 44566666665566666655555555555555555553221
Q ss_pred hhcCChHHHHHHhcCCHHHHHHHHHC----CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCC--CccccccccCCCC
Q psy8763 391 AAEGNLPLHSAVHGGDFKAVELCLKS----GAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQP--SEKLVCLNSTDAQ 464 (641)
Q Consensus 391 ~~~~~t~l~~a~~~~~~~~~~~Ll~~----g~~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~--~~~~~~~~~~~~~ 464 (641)
..|.||||+|+..|+.+++++|++. |.+++. ++.... .......+..+..
T Consensus 82 -~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~ 137 (364)
T 3ljn_A 82 -WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPES-----------------------LLNECDEREVNEIGSHVKHCK 137 (364)
T ss_dssp -BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHH-----------------------HHTCCCCCCEEEETTEEEEES
T ss_pred -cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHH-----------------------HHhhcchHhhhhhccccCCCC
Confidence 1344555555555555555555544 222211 000000 0011223447788
Q ss_pred CCcHHHHHHhcC--ChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCC-----ccccccCCCchhHH
Q psy8763 465 KMTPLHCAAMFD--RCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKAN-----ILLKDINRRNILHL 537 (641)
Q Consensus 465 ~~t~L~~A~~~~--~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~l~~ 537 (641)
|.||||+|+..| +.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+
T Consensus 138 g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~ 217 (364)
T 3ljn_A 138 GQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHW 217 (364)
T ss_dssp CCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHH
T ss_pred CCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHH
Confidence 999999999999 99999999999999999999999999999999999999999999999 99999999999999
Q ss_pred HhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCcc---------ccccC
Q psy8763 538 LVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSF---------IINES 608 (641)
Q Consensus 538 a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---------~~~~~ 608 (641)
|+..+ +.+++++|+++|++++.+|..|.||||+|+..|+.++|++|+++|++.. .....
T Consensus 218 A~~~g------------~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 285 (364)
T 3ljn_A 218 AILIN------------WEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLP 285 (364)
T ss_dssp HHTTT------------CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCG
T ss_pred HHHcC------------CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccc
Confidence 99999 9999999999999999999999999999999999999999999987621 12236
Q ss_pred CCCCChhHHHHHhhCCcceeeecee
Q psy8763 609 DGEGLTPLHIASKEGFHYSVSIFQV 633 (641)
Q Consensus 609 d~~g~t~l~~A~~~~~~~~~~~l~~ 633 (641)
+..+.||++.|+..|+.+.+..|++
T Consensus 286 ~~~~~~~l~~aa~~~~~~~v~~ll~ 310 (364)
T 3ljn_A 286 DRVVWLDFVPAAADPSKQEVLQLLQ 310 (364)
T ss_dssp GGCCCCTTSCSSCCHHHHHHHHHHH
T ss_pred cccccccchhhhhccCHHHHHHHHH
Confidence 7788999999999987766666543
No 22
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1e-39 Score=298.01 Aligned_cols=223 Identities=29% Similarity=0.396 Sum_probs=211.4
Q ss_pred HHHhhcCChHHHHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCc
Q psy8763 388 SLFAAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMT 467 (641)
Q Consensus 388 ~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t 467 (641)
+..+..|.||||.|+..|+.+++++|++.|++++..+..|.||||.|+..|+.+++++|++.+. +++..+..|.|
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-----~~~~~~~~g~t 79 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGA-----LVDPKDAEGST 79 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC-----CCCCCCTTSCC
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCC-----CCCCCCCCCCc
Confidence 3456789999999999999999999999999999999999999999999999999999998544 47888999999
Q ss_pred HHHHHHhcCChhHHHHHHHcC-CCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCch
Q psy8763 468 PLHCAAMFDRCDVVQYLIDEG-ADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHI 546 (641)
Q Consensus 468 ~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~ 546 (641)
|||+|+..++.+++++|+++| ++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..+
T Consensus 80 ~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~---- 155 (237)
T 3b7b_A 80 CLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSG---- 155 (237)
T ss_dssp HHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHC----
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCC----
Confidence 999999999999999999998 899999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHhhCCcc
Q psy8763 547 KEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFHY 626 (641)
Q Consensus 547 ~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~~~~~~ 626 (641)
..+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++ ++..|..|+|||++|+.+|+.+
T Consensus 156 --------~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad---~~~~d~~g~t~l~~A~~~~~~~ 224 (237)
T 3b7b_A 156 --------CVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSD---VTLKNKEGETPLQCASLNSQVW 224 (237)
T ss_dssp --------CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC---TTCCCTTSCCHHHHSCTTCHHH
T ss_pred --------CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCC---CCccCCCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 8999999999999999999875
Q ss_pred eeee
Q psy8763 627 SVSI 630 (641)
Q Consensus 627 ~~~~ 630 (641)
.+..
T Consensus 225 ~~~~ 228 (237)
T 3b7b_A 225 SALQ 228 (237)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 23
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=1.9e-39 Score=297.26 Aligned_cols=221 Identities=23% Similarity=0.284 Sum_probs=200.2
Q ss_pred cccccCCCcchhhHHHhcCCHHHHHHHHh----cCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhh
Q psy8763 25 TRILNNKKQAVLHLATELNKVPILLILLQ----YKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKD 100 (641)
Q Consensus 25 ~~~~~~~~~t~L~~A~~~g~~~~v~~ll~----~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 100 (641)
++.+|..|+||||+|++.|+.+++++|++ .|. +++..+..|.||||+|+..|+.+++++|+++
T Consensus 2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----------- 68 (241)
T 1k1a_A 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGR--ELDIYNNLRQTPLHLAVITTLPSVVRLLVTA----------- 68 (241)
T ss_dssp -----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTC--CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------
T ss_pred ccccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCC--CCCcccccCCCHHHHHHHcCCHHHHHHHHHc-----------
Confidence 35789999999999999999999999997 665 6677889999999999999999999999999
Q ss_pred cCCCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCC
Q psy8763 101 FGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKIS 180 (641)
Q Consensus 101 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~ 180 (641)
|++++..+..|.||||+|+..|+.+++++|++.++..... ++..+..|.||||+|+..|+.+++++|++.|++++
T Consensus 69 -g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 143 (241)
T 1k1a_A 69 -GASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLD----LEARNYDGLTALHVAVNTECQETVQLLLERGADID 143 (241)
T ss_dssp -TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCC----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred -CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc----ccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 9999999999999999999999999999999998832111 25668899999999999999999999999999999
Q ss_pred cCC-CCCCcHHHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCccCCCCCC
Q psy8763 181 TQQ-FDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRS 259 (641)
Q Consensus 181 ~~~-~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~t 259 (641)
..+ ..|.||||+|+..|+.+++++|++++++ ++..+..|.||||+|+..|+.+++++|+++|++++..+..|.|
T Consensus 144 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 218 (241)
T 1k1a_A 144 AVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN-----VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDT 218 (241)
T ss_dssp CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cccccCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCC
Confidence 988 7899999999999999999999999988 6888999999999999999999999999999999999999999
Q ss_pred HHHHHHHcC
Q psy8763 260 PLLLAASRG 268 (641)
Q Consensus 260 ~l~~a~~~~ 268 (641)
|+++|+..+
T Consensus 219 pl~~A~~~~ 227 (241)
T 1k1a_A 219 PLMVARSRR 227 (241)
T ss_dssp TTTTCSSHH
T ss_pred HHHHHHhcC
Confidence 998886554
No 24
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-40 Score=303.14 Aligned_cols=221 Identities=22% Similarity=0.244 Sum_probs=177.6
Q ss_pred hhcCChHHHHHHhcCCHHHHHHHHHCCCC--------CCCCCCCCCcHHHHHHHcCCHH-HHHHHHhcCCCccccccccC
Q psy8763 391 AAEGNLPLHSAVHGGDFKAVELCLKSGAK--------ISTQQFDLSTPVHLACSQGALD-IVRLMFNLQPSEKLVCLNST 461 (641)
Q Consensus 391 ~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~--------~~~~~~~~~t~l~~a~~~~~~~-~v~~ll~~~~~~~~~~~~~~ 461 (641)
|..+.++|+.|+..|+.+++++|++.|.+ ++..+..+.|||+.|+..+..+ ++++|++. +.++|..
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~-----Gadvn~~ 82 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPAS-----GLGVNVT 82 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------C-----CCCTTCC
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHC-----CCCCCCc
Confidence 44566899999999999999999999876 3556677899999999877654 78888884 5558999
Q ss_pred CCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhc
Q psy8763 462 DAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLN 541 (641)
Q Consensus 462 ~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~ 541 (641)
|..|.||||+|+..|+.+++++|+++|++++..+..|.||+++|+..++.+++++|+++|++++.+|..|.||||+|+..
T Consensus 83 d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~ 162 (269)
T 4b93_B 83 SQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSG 162 (269)
T ss_dssp CTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHT
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHh
Q psy8763 542 GGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASK 621 (641)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~ 621 (641)
+ +.+++++|+++|+++|.++..|.||||+|+..|+.++|++|+++|++ ++.+|..|+|||++|++
T Consensus 163 g------------~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad---~~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 163 G------------HHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGAS---VQVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp T------------CGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCC---SCCCCTTSCCSGGGSCT
T ss_pred C------------CHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHh
Confidence 9 88999999999999999999999999999999999999999999999 89999999999999998
Q ss_pred hCC-cceeeec
Q psy8763 622 EGF-HYSVSIF 631 (641)
Q Consensus 622 ~~~-~~~~~~l 631 (641)
+++ .+++++|
T Consensus 228 ~~~i~~lL~~l 238 (269)
T 4b93_B 228 NSKIMELLQVV 238 (269)
T ss_dssp TCHHHHHTTC-
T ss_pred CCcHHHHHHHH
Confidence 886 3444443
No 25
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-40 Score=303.50 Aligned_cols=232 Identities=22% Similarity=0.275 Sum_probs=166.4
Q ss_pred CCChHHHHHHcCChHHHHHHHhccccccCChHHHhHHHhhcCChHHHHHHhcCCH-HHHHHHHHCCCCCCCCCCCCCcHH
Q psy8763 353 GYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGDF-KAVELCLKSGAKISTQQFDLSTPV 431 (641)
Q Consensus 353 ~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~-~~~~~Ll~~g~~~~~~~~~~~t~l 431 (641)
+.++|+.|+..|+.+++++|++.+++........++..+..+.|||+.|+..+.. .++++|++.|++++..+..|.|||
T Consensus 11 ~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpL 90 (269)
T 4b93_B 11 EVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPL 90 (269)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSCCHH
T ss_pred chhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHH
Confidence 3445555555555555555555555433333333455677889999999987765 588999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCH
Q psy8763 432 HLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGW 511 (641)
Q Consensus 432 ~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 511 (641)
|+|+..|+.+++++|++.+. +++..+..|.||++.|+..++.+++++|+++|++++.+|..|+||||+|+..|+.
T Consensus 91 h~A~~~g~~~~v~~Ll~~~a-----~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~ 165 (269)
T 4b93_B 91 HVAALHGRADLIPLLLKHGA-----NAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHH 165 (269)
T ss_dssp HHHHHTTCTTHHHHHHHTTC-----CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCG
T ss_pred HHHHHcCcHHHHHHHHhcCC-----CcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH
Confidence 99999999999999999554 4788899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCC-HH
Q psy8763 512 KTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGR-YN 590 (641)
Q Consensus 512 ~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-~~ 590 (641)
+++++|+++|++++.++..|.||||+|+..+ +.+++++|+++|+|++.+|..|+||||+|+++++ .+
T Consensus 166 ~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g------------~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~ 233 (269)
T 4b93_B 166 ELVALLLQHGASINASNNKGNTALHEAVIEK------------HVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIME 233 (269)
T ss_dssp GGHHHHHHTTCCTTCBCTTSCBHHHHHHHTT------------CHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHH
T ss_pred HHHHHHHHCCCCCCccccCCCcHHHHHHHcC------------CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHH
Confidence 9999999999999999999999999999999 9999999999999999999999999999998775 34
Q ss_pred HHHHHHhcCCC
Q psy8763 591 TVKKLLSSERG 601 (641)
Q Consensus 591 ~v~~Ll~~g~~ 601 (641)
++++|...++.
T Consensus 234 lL~~l~~~~~~ 244 (269)
T 4b93_B 234 LLQVVPSCVAS 244 (269)
T ss_dssp HTTC-------
T ss_pred HHHHHHHhchh
Confidence 44444444444
No 26
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=4.2e-39 Score=292.65 Aligned_cols=224 Identities=24% Similarity=0.309 Sum_probs=211.8
Q ss_pred hcCChHHHHHHhcCCHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHH
Q psy8763 392 AEGNLPLHSAVHGGDFKAVELCLKSGAK-ISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLH 470 (641)
Q Consensus 392 ~~~~t~l~~a~~~~~~~~~~~Ll~~g~~-~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~ 470 (641)
..+.+||+.|+..|+.+.+++|++.+.. ++..+..|.||||.|+..|+.+++++|++.+ .+++..+..|.||||
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----~~~~~~~~~g~t~L~ 78 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLG-----VPVNDKDDAGWSPLH 78 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCSCCCCTTSCCHHH
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhC-----CCCCCcCCCCCCHHH
Confidence 3578999999999999999999987644 6677889999999999999999999999954 447889999999999
Q ss_pred HHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHH
Q psy8763 471 CAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFA 550 (641)
Q Consensus 471 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~ 550 (641)
+|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..+
T Consensus 79 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-------- 150 (231)
T 3aji_A 79 IAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKG-------- 150 (231)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT--------
T ss_pred HHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcC--------
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHhhCCcceeee
Q psy8763 551 EEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFHYSVSI 630 (641)
Q Consensus 551 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ 630 (641)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|+|||++|+..++.+++++
T Consensus 151 ----~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~i~~l 223 (231)
T 3aji_A 151 ----NLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS---IYIENKEEKTPLQVAKGGLGLILKRL 223 (231)
T ss_dssp ----CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHSCHHHHHHHHHH
T ss_pred ----CHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHhhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 89999999999999999999999999
Q ss_pred ceeee
Q psy8763 631 FQVTY 635 (641)
Q Consensus 631 l~~~~ 635 (641)
|++..
T Consensus 224 L~~~~ 228 (231)
T 3aji_A 224 AEGEE 228 (231)
T ss_dssp HHHHH
T ss_pred Hcccc
Confidence 87653
No 27
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=5e-39 Score=302.33 Aligned_cols=217 Identities=20% Similarity=0.163 Sum_probs=190.5
Q ss_pred HHHhhcCChHHHHHHhcCCHHHHHHHHHCCCC---CCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCC
Q psy8763 388 SLFAAEGNLPLHSAVHGGDFKAVELCLKSGAK---ISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQ 464 (641)
Q Consensus 388 ~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~---~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~ 464 (641)
+..+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..|+.+++++|++.+ .+++..+..
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~ 77 (282)
T 1oy3_D 3 GYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG-----AGVLVAERG 77 (282)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCSSCCCTT
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCC
Confidence 34567899999999999999999999999988 7888999999999999999999999999954 447889999
Q ss_pred CCcHHHHHHhcCChhHHHHHHHcCCC-----------------------------------------------CCcCCCC
Q psy8763 465 KMTPLHCAAMFDRCDVVQYLIDEGAD-----------------------------------------------LNVLDKE 497 (641)
Q Consensus 465 ~~t~L~~A~~~~~~~~v~~Ll~~g~~-----------------------------------------------~~~~~~~ 497 (641)
|.||||+|+..++.+++++|+++|++ ++..+..
T Consensus 78 g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (282)
T 1oy3_D 78 GHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYD 157 (282)
T ss_dssp SCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTT
T ss_pred CCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCC
Confidence 99999999999999999999998865 6778889
Q ss_pred CCCHHHHHHhcCCHHHHHHHHHcCCCccccccC-CCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCC
Q psy8763 498 KRSPLLLAASRGGWKTVLTLVRNKANILLKDIN-RRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSN 576 (641)
Q Consensus 498 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g 576 (641)
|.||||+|+..|+.+++++|+++|++++.++.. |.||||+|+..+ +.+++++|+++|++++.+|..|
T Consensus 158 g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~------------~~~~v~~Ll~~gad~~~~d~~g 225 (282)
T 1oy3_D 158 GHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQ------------AASVLELLLKAGADPTARMYGG 225 (282)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTT------------CHHHHHHHHHTTCCTTCCCTTS
T ss_pred CcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcC------------CHHHHHHHHHcCCCCcccccCC
Confidence 999999999999999999999999999999855 999999999999 9999999999999999999999
Q ss_pred CChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHhhCC
Q psy8763 577 ESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGF 624 (641)
Q Consensus 577 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~~~~ 624 (641)
.||||+|+.+|+.+++++|+++|++ ++..|..|.|||++|.....
T Consensus 226 ~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~a~~~~~ 270 (282)
T 1oy3_D 226 RTPLGSALLRPNPILARLLRAHGAP---EPEDGGDKLSPCSSSGSDSD 270 (282)
T ss_dssp CCHHHHHHTSSCHHHHHHHHHTTCC---CCCCC---------------
T ss_pred CCHHHHHHHcCCcHHHHHHHHcCCC---cCcCCCcccccccccCCccc
Confidence 9999999999999999999999999 89999999999999988764
No 28
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=3.5e-38 Score=286.57 Aligned_cols=213 Identities=23% Similarity=0.326 Sum_probs=199.9
Q ss_pred CCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCC
Q psy8763 30 NKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRAC 109 (641)
Q Consensus 30 ~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~ 109 (641)
..+.||||.|++.|+++++++|++.+.. .++..+..|.||||+|+..|+.+++++|+++ |++++..+
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~------------g~~~~~~~ 70 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKS-LATRTDQDSRTALHWACSAGHTEIVEFLLQL------------GVPVNDKD 70 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGG-GGGCCCTTSCCHHHHHHHHTCHHHHHHHHHT------------TCCSCCCC
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchh-hhhcCCCCCCCHHHHHHHcCcHHHHHHHHHh------------CCCCCCcC
Confidence 4578999999999999999999998763 3667789999999999999999999999999 99999999
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcH
Q psy8763 110 SNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTP 189 (641)
Q Consensus 110 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~ 189 (641)
..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++.|++++..+..|.||
T Consensus 71 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 142 (231)
T 3aji_A 71 DAGWSPLHIAASAGXDEIVKALLVKGAHV--------NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATA 142 (231)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCT--------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCCCHHHHHHHcCHHHHHHHHHHcCCCC--------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcH
Confidence 99999999999999999999999999987 4568899999999999999999999999999999999999999
Q ss_pred HHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Q psy8763 190 VHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRG 268 (641)
Q Consensus 190 l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~ 268 (641)
||+|+..|+.+++++|++++.+ ++..+..|.||||+|+..++.+++++|+++|++++..+..|.||+++|...+
T Consensus 143 L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 216 (231)
T 3aji_A 143 MHRAAAKGNLKMVHILLFYKAS-----TNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGL 216 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC-----SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHH
T ss_pred HHHHHHcCCHHHHHHHHhcCCC-----ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhH
Confidence 9999999999999999999988 6888999999999999999999999999999999999999999998886543
No 29
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.2e-37 Score=281.31 Aligned_cols=215 Identities=23% Similarity=0.238 Sum_probs=199.3
Q ss_pred cCCCceeeeccCCCcccccc-cCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHH
Q psy8763 9 DNKNKSRLIPSSSGVNTRIL-NNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILV 87 (641)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~-~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll 87 (641)
|+.+++++++. .|++++.. |..|+||||+|++.|+.+++++|+++|+ +++..+..|.||||+|+..|+.+++++|+
T Consensus 2 g~~~~i~~Ll~-~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 78 (223)
T 2f8y_A 2 DAPAVISDFIY-QGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA--DANIQDNMGRTPLHAAVSADAQGVFQILI 78 (223)
T ss_dssp ---CCEETTEE-TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CcHHHHHHHHH-cCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 67899999997 79998765 8999999999999999999999999997 56678899999999999999999999999
Q ss_pred hcCCCcchhHhhhcCC-CcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCH
Q psy8763 88 SEQPECDWIMVKDFGA-SLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDF 166 (641)
Q Consensus 88 ~~~~~~~~~~~~~~g~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~ 166 (641)
++ +. +++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.
T Consensus 79 ~~------------~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~--------~~~~~~g~t~L~~A~~~~~~ 138 (223)
T 2f8y_A 79 RN------------RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV--------NAVDDLGKSALHWAAAVNNV 138 (223)
T ss_dssp HB------------TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT--------TCBCTTSCBHHHHHHHTTCH
T ss_pred Hc------------CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC--------cCcCCCCCcHHHHHHHcCCH
Confidence 98 54 78888999999999999999999999999999987 45688899999999999999
Q ss_pred HHHHHHHHcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHc
Q psy8763 167 KAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDE 246 (641)
Q Consensus 167 ~~v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~ 246 (641)
+++++|+++|++++.++..|.||||+|+..|+.+++++|++++++ ++..+..|.|||++|+..++.+++++|+++
T Consensus 139 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~ 213 (223)
T 2f8y_A 139 DAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN-----RDITDHMDRLPRDIAQERMHHDIVRLLDEY 213 (223)
T ss_dssp HHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC-----CccccccCCCHHHHHHHhcchHHHHHHHHc
Confidence 999999999999999999999999999999999999999999998 688899999999999999999999999999
Q ss_pred CCCCC
Q psy8763 247 GADLN 251 (641)
Q Consensus 247 g~~~~ 251 (641)
|+...
T Consensus 214 g~~~~ 218 (223)
T 2f8y_A 214 NLVRS 218 (223)
T ss_dssp TCSSC
T ss_pred CCCcc
Confidence 98653
No 30
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.9e-38 Score=286.55 Aligned_cols=219 Identities=26% Similarity=0.305 Sum_probs=202.6
Q ss_pred CChHHHHHHhcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccc-CCCCCCcHHHH
Q psy8763 394 GNLPLHSAVHGGDFKAVELCLKSGAKIST-QQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNS-TDAQKMTPLHC 471 (641)
Q Consensus 394 ~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~-~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~-~~~~~~t~L~~ 471 (641)
|.||||.|+..|+.+++++|++.|.++.. .+..|.||||.|+..|+.+++++|++.+.. .+++. .+..|.||||+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~---~~~~~~~~~~g~t~L~~ 78 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN---VNLDDYPDDSGWTPFHI 78 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTT---CCGGGCCCTTSCCHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccc---ccccccCCCCCCCHHHH
Confidence 68999999999999999999999987655 788999999999999999999999997632 22455 78899999999
Q ss_pred HHhcCChhHHHHHHHcC--CCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhH
Q psy8763 472 AAMFDRCDVVQYLIDEG--ADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEF 549 (641)
Q Consensus 472 A~~~~~~~~v~~Ll~~g--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 549 (641)
|+..++.+++++|+++| ++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..+
T Consensus 79 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------- 151 (228)
T 2dzn_A 79 ACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVG------- 151 (228)
T ss_dssp HHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT-------
T ss_pred HHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcC-------
Confidence 99999999999999999 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcC-CcccccCCCCCChHHHHHhcCCHHHHHHHH-hcCCCccccccCCCCCChhHHHHHhhCCcce
Q psy8763 550 AEEVAAVFLGENLINLG-ACINLKNNSNESPLHLAARYGRYNTVKKLL-SSERGSFIINESDGEGLTPLHIASKEGFHYS 627 (641)
Q Consensus 550 ~~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-~~g~~~~~~~~~d~~g~t~l~~A~~~~~~~~ 627 (641)
+.+++++|+++| ++++.+|..|.||||+|+..|+.+++++|+ +.|++ ++..|..|+|||++|...+ +
T Consensus 152 -----~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~---~~~~~~~g~t~l~~A~~~~---~ 220 (228)
T 2dzn_A 152 -----SLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE---YDLVDNKGAKAEDVALNEQ---V 220 (228)
T ss_dssp -----CHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCC---SCCBCTTSCBGGGGCSSTT---H
T ss_pred -----CHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCC---CCccCCCCCcHHHHHHHHH---H
Confidence 999999999999 999999999999999999999999999999 89999 8999999999999997654 5
Q ss_pred eeecee
Q psy8763 628 VSIFQV 633 (641)
Q Consensus 628 ~~~l~~ 633 (641)
+++|++
T Consensus 221 ~~~l~~ 226 (228)
T 2dzn_A 221 KKFFLN 226 (228)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 666554
No 31
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=6.4e-39 Score=299.39 Aligned_cols=244 Identities=16% Similarity=0.166 Sum_probs=216.6
Q ss_pred CCCccccccCCCceeeeccCCCcccccccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCH
Q psy8763 1 MGLLSVQSDNKNKSRLIPSSSGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFD 80 (641)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~ 80 (641)
|++-++.+.+.+.+..++.+. +++.+|..|+||||+|+..|+.+++++|+++|++ ++.. +|.||||+|+..|+.
T Consensus 2 ~dls~i~~~~~~~v~~lL~~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~--~~~~--~g~t~L~~A~~~g~~ 75 (285)
T 3kea_A 2 MDLSRINTWKSKQLKSFLSSK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGAL--KNLL--ENEFPLHQAATLEDT 75 (285)
T ss_dssp CCCTTGGGCCHHHHHHHHHST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG--GSCC--TTCCHHHHHTTSSSC
T ss_pred CCcHHHHhcCHHHHHHHHHhC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC--CCCC--CCCCHHHHHHHcCCH
Confidence 667778888877777777655 5788999999999999999999999999999984 4444 499999999999999
Q ss_pred HHHHHHHhcCCCcchhHhhhcCCCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCC-ChHHHH
Q psy8763 81 ECARILVSEQPECDWIMVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEG-NLPLHS 159 (641)
Q Consensus 81 ~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~-~t~L~~ 159 (641)
+++++|+++ |++++..+..|.||||+|+..|+.+++++|+++|+++ +..+..| .||||+
T Consensus 76 ~~v~~Ll~~------------ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~--------~~~~~~g~~t~L~~ 135 (285)
T 3kea_A 76 KIVKILLFS------------GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL--------MFYGKTGWKTSFYH 135 (285)
T ss_dssp HHHHHHHHT------------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGG--------GGCSSSGGGSHHHH
T ss_pred HHHHHHHHC------------CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCC--------CccCCCCCCCHHHH
Confidence 999999999 9999999999999999999999999999999999997 5668888 799999
Q ss_pred HHhCCCHHHHHHHHHcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcH-HHHHHhcCcHH
Q psy8763 160 AVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTP-LHCAAMFDRCD 238 (641)
Q Consensus 160 A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~-L~~A~~~~~~~ 238 (641)
|+..|+.+++++|+++|+++... ..|.||||+|+..|+.+++++|++++++ ++..+..|.|| ||+|+..++.+
T Consensus 136 A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad-----~n~~~~~g~t~~L~~A~~~~~~~ 209 (285)
T 3kea_A 136 AVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLLDYMTS-----TNTNNSLLFIPDIKLAIDNKDIE 209 (285)
T ss_dssp HHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHH-----TCTTCCCBCCTTHHHHHHHTCHH
T ss_pred HHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHHHcCCC-----CCcccCCCCChHHHHHHHcCCHH
Confidence 99999999999999999887433 2789999999999999999999999887 68899999998 99999999999
Q ss_pred HHHHHHHcCCCCCccCCCCCCHHHHHHHcCCcccccccccccccCchhHHHHHHhcCChhHHHHHhhCCCcc
Q psy8763 239 VVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMI 310 (641)
Q Consensus 239 iv~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~ 310 (641)
++++|+++|++++..+. .++..++.+++++|++.+..+
T Consensus 210 ~v~~Ll~~gad~~~~~~----------------------------------~a~~~~~~~iv~~Ll~~g~~~ 247 (285)
T 3kea_A 210 MLQALFKYDINIYSANL----------------------------------ENVLLDDAEIAKMIIEKHVEY 247 (285)
T ss_dssp HHHHHTTSCBCSTTTTG----------------------------------GGGTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCCh----------------------------------hhhhcCCHHHHHHHHHcCCCC
Confidence 99999999999987652 123356889999999888743
No 32
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.1e-37 Score=280.96 Aligned_cols=212 Identities=24% Similarity=0.300 Sum_probs=192.3
Q ss_pred CcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCccc-CCC
Q psy8763 32 KQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKR-ACS 110 (641)
Q Consensus 32 ~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~-~~~ 110 (641)
|.||||+|++.|+.+++++|++.|+.+ .+..+..|.||||+|+..|+.+++++|+++++. .+++. .+.
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~----------~~~~~~~~~ 70 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSL-LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN----------VNLDDYPDD 70 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGG-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTT----------CCGGGCCCT
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccc-cccCCCCCCCHHHHHHHcCCHHHHHHHHhcccc----------ccccccCCC
Confidence 789999999999999999999999743 345788999999999999999999999999211 55555 788
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHH
Q psy8763 111 NGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPV 190 (641)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l 190 (641)
.|.||||+|+..|+.+++++|+++|...+ ++..+..|.||||+|+..|+.+++++|+++|++++.++..|.|||
T Consensus 71 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 144 (228)
T 2dzn_A 71 SGWTPFHIACSVGNLEVVKSLYDRPLKPD------LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPL 144 (228)
T ss_dssp TSCCHHHHHHHHCCHHHHHHHHSSSSCCC------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCcc------cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHH
Confidence 99999999999999999999999983332 256688899999999999999999999999999999999999999
Q ss_pred HHHHHcCcHHHHHHHHhcC-CCccccccccCCCCCCcHHHHHHhcCcHHHHHHHH-HcCCCCCccCCCCCCHHHHHH
Q psy8763 191 HLACSQGALDIVRLMFNLQ-PSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLI-DEGADLNVLDKEKRSPLLLAA 265 (641)
Q Consensus 191 ~~A~~~g~~~iv~~Ll~~~-~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll-~~g~~~~~~~~~~~t~l~~a~ 265 (641)
|+|+..|+.+++++|++++ .+ ++..+..|.||||+|+..++.+++++|+ ++|++++..+..|.||+++|.
T Consensus 145 ~~A~~~~~~~~v~~Ll~~g~~~-----~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~ 216 (228)
T 2dzn_A 145 HRAASVGSLKLIELLCGLGKSA-----VNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL 216 (228)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCC-----SCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCS
T ss_pred HHHHHcCCHHHHHHHHhcCccc-----ccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHH
Confidence 9999999999999999999 55 6888999999999999999999999999 899999999999999999884
No 33
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=285.57 Aligned_cols=229 Identities=19% Similarity=0.206 Sum_probs=212.0
Q ss_pred hhcCChHHHHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHH
Q psy8763 391 AAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLH 470 (641)
Q Consensus 391 ~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~ 470 (641)
+..+.++|+.|+..|+.+++++|++.|++++..+..|.||||.|+..|+.+++++|++.++.. ....+..|.||||
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~----~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIV----DQLGGDLNSTPLH 81 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCBTTTTBCHHH
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcc----hhhcCCcCCChhH
Confidence 567889999999999999999999999999999999999999999999999999999976542 2234455899999
Q ss_pred HHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHH
Q psy8763 471 CAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFA 550 (641)
Q Consensus 471 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~ 550 (641)
+|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..+.
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~------- 154 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTH------- 154 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCC-------
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCC-------
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997773
Q ss_pred HHHHHHHHHHHHhhcCCcccccCC-CCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHhhCCcceee
Q psy8763 551 EEVAAVFLGENLINLGACINLKNN-SNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFHYSVS 629 (641)
Q Consensus 551 ~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~ 629 (641)
..+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|++ ++..|..|+|||++|+..|+.++++
T Consensus 155 ----~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~~~v~ 227 (240)
T 3eu9_A 155 ----SVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGAN---VDAQNIKGESALDLAKQRKNVWMIN 227 (240)
T ss_dssp ----SSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCC---TTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred ----hHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 46789999999999999997 999999999999999999999999999 8999999999999999999999999
Q ss_pred eceeeeec
Q psy8763 630 IFQVTYVW 637 (641)
Q Consensus 630 ~l~~~~~~ 637 (641)
+|++....
T Consensus 228 ~L~~~~~~ 235 (240)
T 3eu9_A 228 HLQEARQA 235 (240)
T ss_dssp HHHHHC--
T ss_pred HHHHhhhc
Confidence 99887543
No 34
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=278.45 Aligned_cols=231 Identities=23% Similarity=0.269 Sum_probs=209.0
Q ss_pred cccccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCC
Q psy8763 25 TRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGAS 104 (641)
Q Consensus 25 ~~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~ 104 (641)
++..|..|.|+|++|++.|+.+++++|++.|+ +++..+..|.||||+|+..|+.+++++|+++ |++
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------~~~ 67 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEAGY--DVRQPDKENVTLLHWAAINNRIDLVKYYISK------------GAI 67 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT------------TCC
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHcCC--CcCCCCCCCCCHHHHHHHhCCHHHHHHHHHc------------CCc
Confidence 56678999999999999999999999999997 6677889999999999999999999999999 776
Q ss_pred cccCC-CCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCC
Q psy8763 105 LKRAC-SNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQ 183 (641)
Q Consensus 105 ~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 183 (641)
++... ..|.||||.|+..|+.+++++|+++|+++ +..+..|.|||++|+..|+.+++++|+++|++++..+
T Consensus 68 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~ 139 (240)
T 3eu9_A 68 VDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP--------SLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMD 139 (240)
T ss_dssp TTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT--------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred chhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCC--------cccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccC
Confidence 66554 45999999999999999999999999987 4568889999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHcCc-HHHHHHHHhcCCCccccccccCCC-CCCcHHHHHHhcCcHHHHHHHHHcCCCCCccCCCCCCHH
Q psy8763 184 FDLSTPVHLACSQGA-LDIVRLMFNLQPSEKLVCLNSTDA-QKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPL 261 (641)
Q Consensus 184 ~~~~t~l~~A~~~g~-~~iv~~Ll~~~~~~~~~~~~~~~~-~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~t~l 261 (641)
..|.||||+|+..++ .+++++|++.+.+ ++..+. .|.||||+|+..++.+++++|+++|++++..+..|.||+
T Consensus 140 ~~g~t~l~~a~~~~~~~~~~~~L~~~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 214 (240)
T 3eu9_A 140 QNGMTPLMWAAYRTHSVDPTRLLLTFNVS-----VNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESAL 214 (240)
T ss_dssp TTSCCHHHHHHHHCCSSTTHHHHHHTTCC-----TTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHH
T ss_pred CCCCcHHHHHHHhCChHHHHHHHHhcCCC-----cchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 999999999997766 8999999999988 566665 899999999999999999999999999999999999888
Q ss_pred HHHHHcCCcccccccccccccCchhHHHHHHhcCChhHHHHHhhCCCc
Q psy8763 262 LLAASRGGWKTNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDM 309 (641)
Q Consensus 262 ~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~ 309 (641)
++|+..+ +.+++++|++.+..
T Consensus 215 ~~A~~~~---------------------------~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 215 DLAKQRK---------------------------NVWMINHLQEARQA 235 (240)
T ss_dssp HHHHHTT---------------------------CHHHHHHHHHHC--
T ss_pred HHHHHcC---------------------------cHHHHHHHHHhhhc
Confidence 8776655 89999999988763
No 35
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1e-37 Score=281.83 Aligned_cols=210 Identities=28% Similarity=0.287 Sum_probs=146.6
Q ss_pred CCHHHHHHHHHCCCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCChhHHHH
Q psy8763 405 GDFKAVELCLKSGAKISTQ-QFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQY 483 (641)
Q Consensus 405 ~~~~~~~~Ll~~g~~~~~~-~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~ 483 (641)
|+.+++++|++.|++++.. +..|.||||.|+..|+.+++++|++.+. +++..+..|.||||+|+..++.+++++
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~ 76 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA-----DANIQDNMGRTPLHAAVSADAQGVFQI 76 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTC-----CTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCC-----CCCCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 4555666677777766654 5667777777777777777777776433 356666677777777777777777777
Q ss_pred HHHcCC-CCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHH
Q psy8763 484 LIDEGA-DLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENL 562 (641)
Q Consensus 484 Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~L 562 (641)
|+++|. +++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..+ +.+++++|
T Consensus 77 Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------------~~~~v~~L 144 (223)
T 2f8y_A 77 LIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVN------------NVDAAVVL 144 (223)
T ss_dssp HHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTT------------CHHHHHHH
T ss_pred HHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcC------------CHHHHHHH
Confidence 777765 66666777777777777777777777777777777777777777777777777 66777777
Q ss_pred hhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHhhCCcceeeeceee
Q psy8763 563 INLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFHYSVSIFQVT 634 (641)
Q Consensus 563 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~l~~~ 634 (641)
+++|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.|||++|+..|+.+++++|+++
T Consensus 145 l~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~ 213 (223)
T 2f8y_A 145 LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN---RDITDHMDRLPRDIAQERMHHDIVRLLDEY 213 (223)
T ss_dssp HHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred HHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC---CccccccCCCHHHHHHHhcchHHHHHHHHc
Confidence 777777777777777777777777777777777777776 666777777777777777777777777654
No 36
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=6.7e-37 Score=285.76 Aligned_cols=254 Identities=17% Similarity=0.094 Sum_probs=219.4
Q ss_pred cHHHHHHHHHhcCccccccccCCCChHHHHHHcCChHHHHHHHhccccccCChHHHhHHHhhcCChHHHHHHhcCCHHHH
Q psy8763 331 FDECARILVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGDFKAV 410 (641)
Q Consensus 331 ~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~ 410 (641)
..++.++|. .. +++..+..|.||||+|+..++.+++++|++.|++++.. +|.||||+|+..|+.+++
T Consensus 12 ~~~v~~lL~-~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~----------~g~t~L~~A~~~g~~~~v 78 (285)
T 3kea_A 12 SKQLKSFLS-SK--DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLL----------ENEFPLHQAATLEDTKIV 78 (285)
T ss_dssp HHHHHHHHH-ST--TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCC----------TTCCHHHHHTTSSSCHHH
T ss_pred HHHHHHHHH-hC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC----------CCCCHHHHHHHcCCHHHH
Confidence 345555555 43 57888999999999999999999999999999886543 389999999999999999
Q ss_pred HHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCC-CcHHHHHHhcCChhHHHHHHHcCC
Q psy8763 411 ELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQK-MTPLHCAAMFDRCDVVQYLIDEGA 489 (641)
Q Consensus 411 ~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~-~t~L~~A~~~~~~~~v~~Ll~~g~ 489 (641)
++|+++|++++..+..|.||||.|+..|+.+++++|++. +.+++..+..| .||||+|+..++.+++++|+++|+
T Consensus 79 ~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-----ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~ 153 (285)
T 3kea_A 79 KILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK-----NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP 153 (285)
T ss_dssp HHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-----CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSC
T ss_pred HHHHHCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-----CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999995 45588899999 799999999999999999999998
Q ss_pred CCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCch-hHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCc
Q psy8763 490 DLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNI-LHLLVLNGGGHIKEFAEEVAAVFLGENLINLGAC 568 (641)
Q Consensus 490 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~-l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~ 568 (641)
++... ..|.||||+|+..|+.+++++|+++|++++.+|..|.|| ||+|+..+ +.+++++|+++|++
T Consensus 154 ~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~------------~~~~v~~Ll~~gad 220 (285)
T 3kea_A 154 STFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNK------------DIEMLQALFKYDIN 220 (285)
T ss_dssp TTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHT------------CHHHHHHHTTSCBC
T ss_pred ccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcC------------CHHHHHHHHHcCCC
Confidence 87422 389999999999999999999999999999999999998 99999999 99999999999999
Q ss_pred ccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHhhCCcce
Q psy8763 569 INLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFHYS 627 (641)
Q Consensus 569 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~~~~~~~ 627 (641)
++.+|. .|+..|+.++|++|+++|++ +... ...+.+.++......++
T Consensus 221 ~~~~~~-------~a~~~~~~~iv~~Ll~~g~~---~~~~--~~~~~~~~~~~~~~~~i 267 (285)
T 3kea_A 221 IYSANL-------ENVLLDDAEIAKMIIEKHVE---YKSD--SYTKDLDIVKNNKLDEI 267 (285)
T ss_dssp STTTTG-------GGGTTTCHHHHHHHHHHHHH---HTTC--TTTTTCHHHHTCSHHHH
T ss_pred CCCCCh-------hhhhcCCHHHHHHHHHcCCC---CCCc--cccchHHHHhhhhHHHH
Confidence 999883 56889999999999999987 3322 23345565555544443
No 37
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.8e-37 Score=281.14 Aligned_cols=220 Identities=20% Similarity=0.186 Sum_probs=193.0
Q ss_pred ccccCCCcchhhHHHhcCCHHHHHHHHhcCCcc--ccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCC
Q psy8763 26 RILNNKKQAVLHLATELNKVPILLILLQYKDMI--DILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGA 103 (641)
Q Consensus 26 ~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~--~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~ 103 (641)
+.+|..|+||||+|+..|+.+++++|++.+... +++..+..|.||||+|+..|+.+++++|+++ |+
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------g~ 69 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA------------GC 69 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSC------------CC
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc------------CC
Confidence 457899999999999999999999999987642 6788889999999999999999999999999 99
Q ss_pred CcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCC
Q psy8763 104 SLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQ 183 (641)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 183 (641)
+++..+..|.||||+|+..|+.+++++|++.|+++.. ...++..+..|.||||+|+..|+.++|++|+++|++++..+
T Consensus 70 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 147 (236)
T 1ikn_D 70 DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL--HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQE 147 (236)
T ss_dssp CSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSS--SCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhH--HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999999999999999999986532 22346678899999999999999999999999999999999
Q ss_pred C-CCCcHHHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCC--ccCCCCCCH
Q psy8763 184 F-DLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLN--VLDKEKRSP 260 (641)
Q Consensus 184 ~-~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~--~~~~~~~t~ 260 (641)
. .|.||||+|+..|+.+++++|++++++ ++..+..|.|||++|+..++.+++++|+++|++.. ..+..+.++
T Consensus 148 ~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~-----~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~ 222 (236)
T 1ikn_D 148 PCNGRTALHLAVDLQNPDLVSLLLKCGAD-----VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEES 222 (236)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHTTTCC-----SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCcccCCCCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHH
Confidence 7 999999999999999999999999988 68899999999999999999999999999999775 666677766
Q ss_pred HHHH
Q psy8763 261 LLLA 264 (641)
Q Consensus 261 l~~a 264 (641)
....
T Consensus 223 ~~~~ 226 (236)
T 1ikn_D 223 YDTE 226 (236)
T ss_dssp CCCC
T ss_pred Hhhh
Confidence 5433
No 38
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.9e-37 Score=293.88 Aligned_cols=214 Identities=24% Similarity=0.339 Sum_probs=198.0
Q ss_pred hcCChHHHHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHH
Q psy8763 392 AEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHC 471 (641)
Q Consensus 392 ~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~ 471 (641)
..+.|+|+.|+..|+.+++++|++.|++++..+..|.||||.|+..|+.+++++|++.+ .+++..+..|.||||+
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-----a~~~~~~~~g~tpL~~ 112 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENG-----ANINQPDNEGWIPLHA 112 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHH
T ss_pred cCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCC-----CCCCCCCCCCCcHHHH
Confidence 45678999999999999999999999999999999999999999999999999999954 4488899999999999
Q ss_pred HHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHc-CCCccc------------------------
Q psy8763 472 AAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRN-KANILL------------------------ 526 (641)
Q Consensus 472 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~------------------------ 526 (641)
|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+.. |.+++.
T Consensus 113 A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 192 (299)
T 1s70_B 113 AASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHIND 192 (299)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcch
Confidence 9999999999999999999999999999999999999999999887754 555443
Q ss_pred --cccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccc
Q psy8763 527 --KDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFI 604 (641)
Q Consensus 527 --~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~ 604 (641)
.+..|.||||+|+..+ +.+++++|+++|++++.+|..|.||||+|+..|+.++|++|+++|++
T Consensus 193 ~~~~~~g~t~L~~A~~~g------------~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad--- 257 (299)
T 1s70_B 193 VRHAKSGGTALHVAAAKG------------YTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCD--- 257 (299)
T ss_dssp CCCTTTCCCHHHHHHHHT------------CHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---
T ss_pred hhhcCCCCCHHHHHHHCC------------cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCC---
Confidence 4578999999999999 99999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCChhHHHHHhhCCc
Q psy8763 605 INESDGEGLTPLHIASKEGFH 625 (641)
Q Consensus 605 ~~~~d~~g~t~l~~A~~~~~~ 625 (641)
++..|..|+|||++|.+....
T Consensus 258 ~~~~d~~g~t~l~~A~~~~~~ 278 (299)
T 1s70_B 258 MEAVNKVGQTAFDVADEDILG 278 (299)
T ss_dssp TTCCCTTSCCTTTSCCSGGGH
T ss_pred CCCcCCCCCCHHHHHHHHHHH
Confidence 899999999999999775433
No 39
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.6e-36 Score=287.50 Aligned_cols=238 Identities=22% Similarity=0.326 Sum_probs=207.3
Q ss_pred CCCccccccCCCceeeeccCCC-cc-------cccccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHH
Q psy8763 1 MGLLSVQSDNKNKSRLIPSSSG-VN-------TRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALH 72 (641)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~ 72 (641)
|.|.+++.+..+.++.++.+.. .. ....+..|.||||+|+..|++++|++|+++|+ +++..+..|.||||
T Consensus 1 ~~~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~ 78 (299)
T 1s70_B 1 MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGA--DINYANVDGLTALH 78 (299)
T ss_dssp CCSHHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCC--CTTCBCTTCCBHHH
T ss_pred CchhHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCC--CCcccCCCCCCHHH
Confidence 5666777777666665553221 11 12235577899999999999999999999997 66778899999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCC
Q psy8763 73 IAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAE 152 (641)
Q Consensus 73 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 152 (641)
+|+..|+.+++++|+++ |++++..+..|.||||+|+..|+.+++++|+++|+++ +..+..
T Consensus 79 ~A~~~g~~~~v~~Ll~~------------ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~--------~~~~~~ 138 (299)
T 1s70_B 79 QACIDDNVDMVKFLVEN------------GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHV--------GAVNSE 138 (299)
T ss_dssp HHHHTTCHHHHHHHHHT------------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT--------TCCCTT
T ss_pred HHHHcCCHHHHHHHHHC------------CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC--------CCcCCC
Confidence 99999999999999999 9999999999999999999999999999999999987 456889
Q ss_pred CChHHHHHHhCCCHHHHHHHHH-cCCCCC--------------------------cCCCCCCcHHHHHHHcCcHHHHHHH
Q psy8763 153 GNLPLHSAVHGGDFKAVELCLK-SGAKIS--------------------------TQQFDLSTPVHLACSQGALDIVRLM 205 (641)
Q Consensus 153 ~~t~L~~A~~~g~~~~v~~Ll~-~g~~~~--------------------------~~~~~~~t~l~~A~~~g~~~iv~~L 205 (641)
|.|||++|+..|+.++++.++. .|.+++ ..+..|.||||+|+..|+.+++++|
T Consensus 139 g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 218 (299)
T 1s70_B 139 GDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218 (299)
T ss_dssp SCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHH
T ss_pred CCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHH
Confidence 9999999999999999987765 344432 3456789999999999999999999
Q ss_pred HhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Q psy8763 206 FNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAA 265 (641)
Q Consensus 206 l~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~ 265 (641)
++++++ ++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||+++|.
T Consensus 219 l~~g~d-----~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 273 (299)
T 1s70_B 219 IQARYD-----VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD 273 (299)
T ss_dssp HTTTCC-----TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTTTSCC
T ss_pred HHcCCC-----CCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 999988 6889999999999999999999999999999999999999999999884
No 40
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2.8e-37 Score=294.29 Aligned_cols=258 Identities=15% Similarity=0.055 Sum_probs=193.8
Q ss_pred HHHHHHHHHhcCccccccccCCCChHHHHHHcCChHHHHHHHhccccccCChHHHh---------HHHhhcCChHHHHHH
Q psy8763 332 DECARILVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMI---------SLFAAEGNLPLHSAV 402 (641)
Q Consensus 332 ~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~---------~~~~~~~~t~l~~a~ 402 (641)
.+++++|+ +.|++++..+..|.++++ |+.++++.|++.|++++...-... ........+..+.++
T Consensus 32 ~dlv~~ll-~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~ 105 (327)
T 1sw6_A 32 HDLTSDFL-SSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSF 105 (327)
T ss_dssp TTCCCSTT-TSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------------CH
T ss_pred CchHHHHh-hCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHH
Confidence 34455555 556666666666666654 566666666666655432110000 000111223357777
Q ss_pred hcCCHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCC---h
Q psy8763 403 HGGDFKAVELCLKSGAKIST-QQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDR---C 478 (641)
Q Consensus 403 ~~~~~~~~~~Ll~~g~~~~~-~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~---~ 478 (641)
..+..+++++|++.|++++. .+..|.||||+|+..|+.+++++|++.+ .+++.++..|.||||+|+..++ .
T Consensus 106 ~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~G-----ad~n~~d~~g~TpLh~A~~~g~~~~~ 180 (327)
T 1sw6_A 106 DSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHG-----SNRLYGDNMGESCLVKAVKSVNNYDS 180 (327)
T ss_dssp HHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTT-----CCTTBCCTTCCCHHHHHHHSSHHHHT
T ss_pred HhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCCCCCHHHHHHHhcccccH
Confidence 78888999999999999999 8999999999999999999999999954 4588999999999999999998 7
Q ss_pred hHHHHHHHcC-CCCCcCCCCCCCHHHHHHh----cCCHHHHHHHHHc--------------------CCCccccccCCCc
Q psy8763 479 DVVQYLIDEG-ADLNVLDKEKRSPLLLAAS----RGGWKTVLTLVRN--------------------KANILLKDINRRN 533 (641)
Q Consensus 479 ~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~----~~~~~~v~~Ll~~--------------------g~~~~~~~~~g~t 533 (641)
++++.|++.+ ++++.++..|+||||+|+. .++.+++++|++. |++++.++..|.|
T Consensus 181 ~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t 260 (327)
T 1sw6_A 181 GTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKD 260 (327)
T ss_dssp TCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------C
T ss_pred HHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCC
Confidence 8888998886 7899999999999999999 8999999999987 8999999999999
Q ss_pred hhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCC
Q psy8763 534 ILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGL 613 (641)
Q Consensus 534 ~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~ 613 (641)
|||.|+. +++|+++ +++.+|..|+||||+|+.+|+.++|++|+++|++ ++.+|..|+
T Consensus 261 ~L~~a~~------------------~~~Ll~~--~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad---~~~~d~~G~ 317 (327)
T 1sw6_A 261 SILENLD------------------LKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD---PFIANKSGL 317 (327)
T ss_dssp HHHHHCS------------------HHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC---TTCCCTTSC
T ss_pred hhHHHHH------------------HHHHHHh--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CcccCCCCC
Confidence 9999873 6778887 6899999999999999999999999999999999 899999999
Q ss_pred hhHHHHHhhC
Q psy8763 614 TPLHIASKEG 623 (641)
Q Consensus 614 t~l~~A~~~~ 623 (641)
||||+|+.+|
T Consensus 318 TpL~~A~~~g 327 (327)
T 1sw6_A 318 RPVDFGAGLE 327 (327)
T ss_dssp CGGGGTCC--
T ss_pred CHHHHHHhcC
Confidence 9999998875
No 41
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=1.9e-35 Score=268.49 Aligned_cols=208 Identities=26% Similarity=0.292 Sum_probs=181.6
Q ss_pred CCcchhhHHHhcCCHHHHHHHHhc-CCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCc----
Q psy8763 31 KKQAVLHLATELNKVPILLILLQY-KDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASL---- 105 (641)
Q Consensus 31 ~~~t~L~~A~~~g~~~~v~~ll~~-g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~---- 105 (641)
.|+||||+|++.|+.+++++|++. |+ +++..+..|.||||+|+..|+.+++++|+++ |+++
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~--~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~------------~~~~~~~~ 67 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGC--EVHQRGAMGETALHIAALYDNLEAAMVLMEA------------APELVFEP 67 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCS--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH------------CGGGGGCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCC--CcccCCCCCCCHHHHHHHcCCHHHHHHHHHc------------Cchhcccc
Confidence 589999999999999999999998 76 6778899999999999999999999999999 5554
Q ss_pred -ccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhh-----hhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCC
Q psy8763 106 -KRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREE-----MISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKI 179 (641)
Q Consensus 106 -~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-----~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~ 179 (641)
+..+..|.||||+|+..|+.+++++|+++|++++..... ..+..+..|.||||+|+..|+.++|++|+++|+++
T Consensus 68 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~ 147 (232)
T 2rfa_A 68 MTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADI 147 (232)
T ss_dssp CCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCT
T ss_pred ccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 667789999999999999999999999999998643211 11223457999999999999999999999999999
Q ss_pred CcCCCCCCcHHHHHHHcCcHHHH----HHHHhcCCCcccccc-ccCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCc
Q psy8763 180 STQQFDLSTPVHLACSQGALDIV----RLMFNLQPSEKLVCL-NSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNV 252 (641)
Q Consensus 180 ~~~~~~~~t~l~~A~~~g~~~iv----~~Ll~~~~~~~~~~~-~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~ 252 (641)
+.++..|.||||+|+..|+.+++ ++|+++++......+ +..+..|.|||++|+..|+.+++++|+++|.....
T Consensus 148 ~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~~~ 225 (232)
T 2rfa_A 148 RAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAA 225 (232)
T ss_dssp TCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC--
T ss_pred CCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccchh
Confidence 99999999999999999999988 999999987421111 57889999999999999999999999999986654
No 42
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=3.7e-35 Score=266.65 Aligned_cols=197 Identities=22% Similarity=0.273 Sum_probs=183.0
Q ss_pred cCChHHHHHHhcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHH
Q psy8763 393 EGNLPLHSAVHGGDFKAVELCLKS-GAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHC 471 (641)
Q Consensus 393 ~~~t~l~~a~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~ 471 (641)
.|.||||.|+..|+.+++++|++. |++++..+..|.||||.|+..|+.+++++|++.++.......+..+..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~ 81 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHI 81 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHH
Confidence 488999999999999999999998 9999999999999999999999999999999977654333346778899999999
Q ss_pred HHhcCChhHHHHHHHcCCCCCcCCC-------------CCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHH
Q psy8763 472 AAMFDRCDVVQYLIDEGADLNVLDK-------------EKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLL 538 (641)
Q Consensus 472 A~~~~~~~~v~~Ll~~g~~~~~~~~-------------~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a 538 (641)
|+..++.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|
T Consensus 82 A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A 161 (232)
T 2rfa_A 82 AVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHIL 161 (232)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Confidence 9999999999999999999998765 799999999999999999999999999999999999999999
Q ss_pred hhcCCCchhhHHHHHHHHHHH----HHHhhcCCcc------cccCCCCCChHHHHHhcCCHHHHHHHHhcCCC
Q psy8763 539 VLNGGGHIKEFAEEVAAVFLG----ENLINLGACI------NLKNNSNESPLHLAARYGRYNTVKKLLSSERG 601 (641)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~----~~Ll~~g~~~------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 601 (641)
+..+ +.+++ ++|+++|+++ +.+|..|.||||+|+..|+.++|++|+++|+.
T Consensus 162 ~~~~------------~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 162 ILQP------------NKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp HTCS------------CHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHcC------------ChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 9999 55555 9999999988 68999999999999999999999999999976
No 43
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=2.6e-36 Score=274.73 Aligned_cols=218 Identities=21% Similarity=0.119 Sum_probs=193.3
Q ss_pred HHhhcCChHHHHHHhcCCHHHHHHHHHCCC----CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCC
Q psy8763 389 LFAAEGNLPLHSAVHGGDFKAVELCLKSGA----KISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQ 464 (641)
Q Consensus 389 ~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~----~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~ 464 (641)
..+..|.||||+|+..|+.+++++|++.+. +++..+..|.||||.|+..|+.+++++|++.+ .+++..+..
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~ 77 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG-----CDPELRDFR 77 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCC-----CCSCCCCTT
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCcCCC
Confidence 356789999999999999999999998765 78999999999999999999999999999854 447889999
Q ss_pred CCcHHHHHHhcCChhHHHHHHHcCCC------CCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCcccccc-CCCchhHH
Q psy8763 465 KMTPLHCAAMFDRCDVVQYLIDEGAD------LNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDI-NRRNILHL 537 (641)
Q Consensus 465 ~~t~L~~A~~~~~~~~v~~Ll~~g~~------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~-~g~t~l~~ 537 (641)
|.||||+|+..++.+++++|+++|++ ++..+..|.||||+|+..++.+++++|+++|++++.++. .|.||||+
T Consensus 78 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~ 157 (236)
T 1ikn_D 78 GNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHL 157 (236)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHH
Confidence 99999999999999999999999976 466788999999999999999999999999999999997 99999999
Q ss_pred HhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHH
Q psy8763 538 LVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLH 617 (641)
Q Consensus 538 a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~ 617 (641)
|+..+ +.+++++|+++|++++.+|..|.||||+|+.+|+.+++++|+++|+++. ....+..|.||.+
T Consensus 158 A~~~~------------~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~-~~~~~~~~~~~~~ 224 (236)
T 1ikn_D 158 AVDLQ------------NPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL-QMLPESEDEESYD 224 (236)
T ss_dssp HHHTT------------CHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG-SSCCCCCTTTCCC
T ss_pred HHHcC------------CHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh-hcCCccchHHHHh
Confidence 99999 9999999999999999999999999999999999999999999999842 3578999999998
Q ss_pred HHHhhCC
Q psy8763 618 IASKEGF 624 (641)
Q Consensus 618 ~A~~~~~ 624 (641)
.+.....
T Consensus 225 ~~~~~~~ 231 (236)
T 1ikn_D 225 TESEFTE 231 (236)
T ss_dssp CC-----
T ss_pred hhccccc
Confidence 7765543
No 44
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=5.6e-34 Score=252.60 Aligned_cols=193 Identities=20% Similarity=0.177 Sum_probs=180.2
Q ss_pred cCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccC
Q psy8763 29 NNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRA 108 (641)
Q Consensus 29 ~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~ 108 (641)
+..+.||||.|+..|+.+.++.|++.+. .+++..+..|.||||+|+..|+.+++++|+++ |++++..
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------g~~~~~~ 68 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDTT-YQVDEVDTEGNTPLNIAVHNNDIEIAKALIDR------------GADINLQ 68 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCTT-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT------------TCCTTCC
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcCC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc------------CCCCCCC
Confidence 4678999999999999999999999886 46778889999999999999999999999999 9999999
Q ss_pred CCCCCcHHHHHHHhCCHHHHHHHHHh-cccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcC-CCCCcCCCCC
Q psy8763 109 CSNGYYPIHDAAKNASSKTMEVFLQF-GESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSG-AKISTQQFDL 186 (641)
Q Consensus 109 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~~~~~ 186 (641)
+..|.||||+|+..|+.+++++|++. ++++ +..+..|.||||+|+..|+.+++++|++.| ++++.++..|
T Consensus 69 ~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~--------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g 140 (201)
T 3hra_A 69 NSISDSPYLYAGAQGRTEILAYMLKHATPDL--------NKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFG 140 (201)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHHSCCCT--------TCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhccCccc--------ccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCC
Confidence 99999999999999999999999954 4454 567889999999999999999999999999 9999999999
Q ss_pred CcHHHHHHHcCc-----HHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHcC
Q psy8763 187 STPVHLACSQGA-----LDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEG 247 (641)
Q Consensus 187 ~t~l~~A~~~g~-----~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g 247 (641)
.||||+|+..++ .+++++|++++++ ++..+..|.|||++|+..|+.+++++|+++|
T Consensus 141 ~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~-----~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 141 YTALIEAVGLREGNQLYQDIVKLLMENGAD-----QSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CCHHHHHHHSSCCSHHHHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCHHHHHHHhccchhhHHHHHHHHHHCCCC-----CCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 999999999998 9999999999988 6889999999999999999999999999987
No 45
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1e-35 Score=277.28 Aligned_cols=240 Identities=16% Similarity=0.145 Sum_probs=175.1
Q ss_pred CCCcccccccCCCcchhhHHHhcCCHHHHHHHHhcCCc--cccc----cCCCCCchHHHHHHHc---CCHHHHHHHHhcC
Q psy8763 20 SSGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDM--IDIL----QGGEHGRTALHIAAIY---DFDECARILVSEQ 90 (641)
Q Consensus 20 ~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~--~~~~----~~~~~g~t~L~~A~~~---g~~~iv~~Ll~~~ 90 (641)
|.++..+..|..|+||||+|++.|+.++|+.|++++.. .+++ ..+..|.||||+|+.. |+.++|++|++++
T Consensus 1 S~~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~g 80 (273)
T 2pnn_A 1 SVSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVA 80 (273)
T ss_dssp ----------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHH
T ss_pred CCcccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhh
Confidence 45777888999999999999999999999999875421 1232 3478999999999987 9999999999984
Q ss_pred CCcchhHhhhcCCCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhh------hhccccCCCChHHHHHHhCC
Q psy8763 91 PECDWIMVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREE------MISLFDAEGNLPLHSAVHGG 164 (641)
Q Consensus 91 ~~~~~~~~~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~------~~~~~~~~~~t~L~~A~~~g 164 (641)
+...... ..........+..|.||||+|+..|+.+++++|+++|++++..... .....+..|.||||+|+..|
T Consensus 81 a~~~~~~-~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g 159 (273)
T 2pnn_A 81 RKTDSLK-QFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTN 159 (273)
T ss_dssp HHTTCHH-HHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTT
T ss_pred ccccchh-HHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcC
Confidence 3211100 0012223335678999999999999999999999999998543210 00111237999999999999
Q ss_pred CHHHHHHHHH---cCCCCCcCCCCCCcHHHHHHHcCc---------HHHHHHHHhcCCCccc--cccccCCCCCCcHHHH
Q psy8763 165 DFKAVELCLK---SGAKISTQQFDLSTPVHLACSQGA---------LDIVRLMFNLQPSEKL--VCLNSTDAQKMTPLHC 230 (641)
Q Consensus 165 ~~~~v~~Ll~---~g~~~~~~~~~~~t~l~~A~~~g~---------~~iv~~Ll~~~~~~~~--~~~~~~~~~~~t~L~~ 230 (641)
+.++|++|++ .|++++.++..|+||||+|+..|+ .+++++|++++++... ..++..+..|.|||++
T Consensus 160 ~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~ 239 (273)
T 2pnn_A 160 QLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLAL 239 (273)
T ss_dssp CHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHH
T ss_pred CHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHH
Confidence 9999999999 999999999999999999999998 8999999999877310 0013578999999999
Q ss_pred HHhcCcHHHHHHHHHcCC-CCCccCCCCCCH
Q psy8763 231 AAMFDRCDVVQYLIDEGA-DLNVLDKEKRSP 260 (641)
Q Consensus 231 A~~~~~~~iv~~Ll~~g~-~~~~~~~~~~t~ 260 (641)
|+..|+.+++++|+++|+ |+......+.+|
T Consensus 240 A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~ 270 (273)
T 2pnn_A 240 AASSGKIGVLAYILQREIHEPECRHAAAHHH 270 (273)
T ss_dssp HHHTTCHHHHHHHHHHHTC------------
T ss_pred HHHhChHHHHHHHHHCCCCCchhhhhhhhhc
Confidence 999999999999999999 777666655544
No 46
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=3.1e-34 Score=242.32 Aligned_cols=156 Identities=32% Similarity=0.361 Sum_probs=134.7
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhc
Q psy8763 429 TPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASR 508 (641)
Q Consensus 429 t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 508 (641)
++|+.|++.|+.++|++|++. +.++|.+|..|.||||+|+..++.+++++|+++|++++.++..|+||||+|+..
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~-----Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN-----GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHcCCHHHHHHHHHC-----CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHc
Confidence 467788888888888888874 344778888888888888888889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCC
Q psy8763 509 GGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGR 588 (641)
Q Consensus 509 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 588 (641)
|+.+++++|+++|++++.+|..|+||||+|+..+ +.+++++|+++|++++.+|..|+||||+|+.+|+
T Consensus 81 g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g------------~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~ 148 (169)
T 4gpm_A 81 GHKEVVKLLISKGADVNAKDSDGRTPLHHAAENG------------HKEVVKLLISKGADVNTSDSDGRTPLDLAREHGN 148 (169)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------------CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcC------------CHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCC
Confidence 9999999999999999999999999999999988 8889999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCC
Q psy8763 589 YNTVKKLLSSERG 601 (641)
Q Consensus 589 ~~~v~~Ll~~g~~ 601 (641)
.++|++|+++||+
T Consensus 149 ~~iv~~Ll~~GA~ 161 (169)
T 4gpm_A 149 EEVVKLLEKQGGW 161 (169)
T ss_dssp HHHHHHHHTC---
T ss_pred HHHHHHHHHCCCC
Confidence 9999999999987
No 47
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=2.3e-33 Score=248.70 Aligned_cols=195 Identities=19% Similarity=0.214 Sum_probs=105.2
Q ss_pred cCChHHHHHHhcCCHHHHHHHHHCCC-CCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHH
Q psy8763 393 EGNLPLHSAVHGGDFKAVELCLKSGA-KISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHC 471 (641)
Q Consensus 393 ~~~t~l~~a~~~~~~~~~~~Ll~~g~-~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~ 471 (641)
.+.|||+.|+..|+.+.++.|+..+. +++..+..|.||||.|+..|+.+++++|++.+ .+++..+..|.||||+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~g~t~l~~ 78 (201)
T 3hra_A 4 YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG-----ADINLQNSISDSPYLY 78 (201)
T ss_dssp CCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----CCTTCCCTTSCCHHHH
T ss_pred ccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-----CCCCCCCCCCCCHHHH
Confidence 34555555555555555555555543 55555555555555555555555555555532 2244555555555555
Q ss_pred HHhcCChhHHHHHH-HcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcC-CCccccccCCCchhHHHhhcCCCchhhH
Q psy8763 472 AAMFDRCDVVQYLI-DEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNK-ANILLKDINRRNILHLLVLNGGGHIKEF 549 (641)
Q Consensus 472 A~~~~~~~~v~~Ll-~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 549 (641)
|+..++.+++++|+ ..+++++..+..|.||||+|+..++.+++++|+++| ++++.+|..|.||||+|+..+.....
T Consensus 79 A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~-- 156 (201)
T 3hra_A 79 AGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQL-- 156 (201)
T ss_dssp HHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHH--
T ss_pred HHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhh--
Confidence 55555555555555 334455555555555555555555555555555555 55555555555555555555421100
Q ss_pred HHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcC
Q psy8763 550 AEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSE 599 (641)
Q Consensus 550 ~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 599 (641)
..+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|
T Consensus 157 -----~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 157 -----YQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp -----HHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred -----HHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 245555555555555555555555555555555555555555544
No 48
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.2e-33 Score=238.83 Aligned_cols=159 Identities=28% Similarity=0.441 Sum_probs=148.4
Q ss_pred hHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhcc
Q psy8763 69 TALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISL 148 (641)
Q Consensus 69 t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~ 148 (641)
++|+.||+.|+.++|++|+++ |++++.++..|+||||+|+..++.+++++|++.|+++ +.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~------------Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~--------~~ 65 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN------------GADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADV--------NA 65 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT------------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT--------TC
T ss_pred HHHHHHHHcCCHHHHHHHHHC------------CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch--------hh
Confidence 479999999999999999999 9999999999999999999999999999999999997 56
Q ss_pred ccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHH
Q psy8763 149 FDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPL 228 (641)
Q Consensus 149 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L 228 (641)
.+..|.||||+|+..|+.++|++|+++|++++.++..|+||||+|+..|+.++|++|++++++ ++..+..|.|||
T Consensus 66 ~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad-----~~~~d~~G~TpL 140 (169)
T 4gpm_A 66 KDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD-----VNTSDSDGRTPL 140 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHH
T ss_pred hccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----ccccCCCCCCHH
Confidence 788999999999999999999999999999999999999999999999999999999999998 688999999999
Q ss_pred HHHHhcCcHHHHHHHHHcCCCCCc
Q psy8763 229 HCAAMFDRCDVVQYLIDEGADLNV 252 (641)
Q Consensus 229 ~~A~~~~~~~iv~~Ll~~g~~~~~ 252 (641)
++|+..|+.+++++|+++|++++.
T Consensus 141 ~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 141 DLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHHTTCHHHHHHHHTC------
T ss_pred HHHHHcCCHHHHHHHHHCCCCcCC
Confidence 999999999999999999999874
No 49
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=3.5e-35 Score=279.88 Aligned_cols=273 Identities=16% Similarity=0.103 Sum_probs=152.9
Q ss_pred ccccCCCceeeeccCCCcccccccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHH
Q psy8763 6 VQSDNKNKSRLIPSSSGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARI 85 (641)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~ 85 (641)
+.-...+++++++. .|++++.+|..|.|+++ |+.++|++|+++|++++. ++++.|+......
T Consensus 27 ~~~~~~dlv~~ll~-~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~--------~~~~~a~~~~~~~---- 88 (327)
T 1sw6_A 27 IITFTHDLTSDFLS-SPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEI--------QEMPTSLNNDSSN---- 88 (327)
T ss_dssp EEECCTTCCCSTTT-SSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC----------------------------
T ss_pred hhhhcCchHHHHhh-CCcccccCCCCCCcccC-----chhHHHHHHHHhccCCcc--------ccchHhhhccccc----
Confidence 33445567777776 78888888888888877 888888888888864321 2343333221000
Q ss_pred HHhcCCCcchhHhhhcCCCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhcc-ccCCCChHHHHHHhCC
Q psy8763 86 LVSEQPECDWIMVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISL-FDAEGNLPLHSAVHGG 164 (641)
Q Consensus 86 Ll~~~~~~~~~~~~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~-~~~~~~t~L~~A~~~g 164 (641)
.-........+.+|.|+..+..++++.|++.|++++ . .+..|.||||+|+..|
T Consensus 89 ------------------~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn--------~~~d~~g~TpLh~Aa~~g 142 (327)
T 1sw6_A 89 ------------------RNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLN--------IPVDEHGNTPLHWLTSIA 142 (327)
T ss_dssp ---------------------------------CHHHHHHHHHHHCTTSCCCSC--------SCCSTTCCCHHHHHHHTT
T ss_pred ------------------ccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcc--------cccCCCCCcHHHHHHHcC
Confidence 000000111123455555555555555555555542 2 3555555555555555
Q ss_pred CHHHHHHHHHcCCCCCcCCCCCCcHHHHHHHcCc---HHHHHHHHhcCCCccccccccCCCCCCcHHHHHHh----cCcH
Q psy8763 165 DFKAVELCLKSGAKISTQQFDLSTPVHLACSQGA---LDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAM----FDRC 237 (641)
Q Consensus 165 ~~~~v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~---~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~----~~~~ 237 (641)
+.++|++|+++|++++.++..|+||||+|+..|+ .++++.|++++... ++..+..|.||||+|+. .|+.
T Consensus 143 ~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~----~~~~d~~g~tpLh~A~~~~~~~g~~ 218 (327)
T 1sw6_A 143 NLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC----LILEDSMNRTILHHIIITSGMTGCS 218 (327)
T ss_dssp CHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG----GGEECTTCCCHHHHHHHHHTSTTCH
T ss_pred CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcc----ccCCCCCCCCHHHHHHHHccccccH
Confidence 5555555555555555555555555555555555 34444444443211 44555555555555555 5555
Q ss_pred HHHHHHHHc--------------------CCCCCccCCCCCCHHHHHHHcCCcccccccccccccCchhHHHHHHhcCCh
Q psy8763 238 DVVQYLIDE--------------------GADLNVLDKEKRSPLLLAASRGGWKTNGVNTRILNNKKQAVLHLATELNKV 297 (641)
Q Consensus 238 ~iv~~Ll~~--------------------g~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~ 297 (641)
+++++|++. |++++..+..|.||++.++.
T Consensus 219 ~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------------------------------- 267 (327)
T 1sw6_A 219 AAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------------------------------- 267 (327)
T ss_dssp HHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS-------------------------------
T ss_pred HHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH-------------------------------
Confidence 555555554 88888888888888887631
Q ss_pred hHHHHHhhCCCcccccCCCCCcchHHHHHHHhCcHHHHHHHHHhcCccccccccCCCChHHHHHHcC
Q psy8763 298 PILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVKDFGASLKRACSNGYYPIHDAAKNA 364 (641)
Q Consensus 298 ~~~~~ll~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~~l~~a~~~~ 364 (641)
+++|++. +++..+..|.||||+|+..|+.+++++|+ +.|++++..+..|.|||++|+..|
T Consensus 268 --~~~Ll~~----~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll-~~Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 268 --LKWIIAN----MLNAQDSNGDTCLNIAARLGNISIVDALL-DYGADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp --HHHHHHH----TTTCCCTTSCCHHHHHHHHCCHHHHHHHH-HTTCCTTCCCTTSCCGGGGTCC--
T ss_pred --HHHHHHh----CCCCCCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCcccCCCCCCHHHHHHhcC
Confidence 6667666 35566778999999999999999999999 779999999999999999987654
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.9e-34 Score=264.77 Aligned_cols=207 Identities=15% Similarity=0.133 Sum_probs=174.5
Q ss_pred CCcchhhHHHhcCCHH----HHHHHHhcCCcccccc----CCCCCchHHHHHHHc---CCHHHHHHHHhcCCCcchhHhh
Q psy8763 31 KKQAVLHLATELNKVP----ILLILLQYKDMIDILQ----GGEHGRTALHIAAIY---DFDECARILVSEQPECDWIMVK 99 (641)
Q Consensus 31 ~~~t~L~~A~~~g~~~----~v~~ll~~g~~~~~~~----~~~~g~t~L~~A~~~---g~~~iv~~Ll~~~~~~~~~~~~ 99 (641)
.|+||||+|++.|+.+ ++++|++.|+ +++. .+..|.||||+|+.. |+.+++++|+++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~--~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~---------- 68 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSK--YLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQI---------- 68 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTC--CTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHH----------
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCC--CcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhc----------
Confidence 4899999999999997 6677788897 5565 789999999999999 999999999998
Q ss_pred hcCCCcc-----------cCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhh-----hccccCCCChHHHHHHhC
Q psy8763 100 DFGASLK-----------RACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEM-----ISLFDAEGNLPLHSAVHG 163 (641)
Q Consensus 100 ~~g~~~~-----------~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-----~~~~~~~~~t~L~~A~~~ 163 (641)
|++++ ..+..|.||||+|+..|+.+++++|+++|++++.....- ....+..|.||||+|+..
T Consensus 69 --g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~ 146 (256)
T 2etb_A 69 --DKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACT 146 (256)
T ss_dssp --HHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHT
T ss_pred --CCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHc
Confidence 54444 334789999999999999999999999999985432110 001112399999999999
Q ss_pred CCHHHHHHHHH---cCCCCCcCCCCCCcHHHHHHH--cCcHH-------HHHHHHhcCCCcccc--ccccCCCCCCcHHH
Q psy8763 164 GDFKAVELCLK---SGAKISTQQFDLSTPVHLACS--QGALD-------IVRLMFNLQPSEKLV--CLNSTDAQKMTPLH 229 (641)
Q Consensus 164 g~~~~v~~Ll~---~g~~~~~~~~~~~t~l~~A~~--~g~~~-------iv~~Ll~~~~~~~~~--~~~~~~~~~~t~L~ 229 (641)
|+.++|++|++ .|++++.++..|+||||+|+. .++.+ ++++|++++++.... ..+..+..|.||||
T Consensus 147 ~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 226 (256)
T 2etb_A 147 KQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLK 226 (256)
T ss_dssp TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHH
T ss_pred CCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHH
Confidence 99999999999 999999999999999999999 88888 999999998772000 00778999999999
Q ss_pred HHHhcCcHHHHHHHHHcCCCCC
Q psy8763 230 CAAMFDRCDVVQYLIDEGADLN 251 (641)
Q Consensus 230 ~A~~~~~~~iv~~Ll~~g~~~~ 251 (641)
+|+..|+.+++++|+++|++..
T Consensus 227 ~A~~~g~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 227 LAAKEGKIEIFRHILQREFSGA 248 (256)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHhCCCCCC
Confidence 9999999999999999987543
No 51
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=4.9e-34 Score=263.24 Aligned_cols=205 Identities=21% Similarity=0.253 Sum_probs=177.0
Q ss_pred CChHHHHHHhcCCHH----HHHHHHHCCCCCCC----CCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCccccc-----
Q psy8763 394 GNLPLHSAVHGGDFK----AVELCLKSGAKIST----QQFDLSTPVHLACSQ---GALDIVRLMFNLQPSEKLVC----- 457 (641)
Q Consensus 394 ~~t~l~~a~~~~~~~----~~~~Ll~~g~~~~~----~~~~~~t~l~~a~~~---~~~~~v~~ll~~~~~~~~~~----- 457 (641)
|+||||.|+..|+.+ ++++|++.|++++. .+..|.||||.|+.. |+.+++++|++.+.......
T Consensus 2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 81 (256)
T 2etb_A 2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA 81 (256)
T ss_dssp CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence 779999999999997 66788889999998 899999999999999 99999999998543321100
Q ss_pred -cccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCC-------------CCCHHHHHHhcCCHHHHHHHHH---c
Q psy8763 458 -LNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKE-------------KRSPLLLAASRGGWKTVLTLVR---N 520 (641)
Q Consensus 458 -~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-------------g~t~L~~A~~~~~~~~v~~Ll~---~ 520 (641)
....|..|.||||+|+..++.+++++|+++|++++..+.. |.||||+|+..|+.+++++|++ +
T Consensus 82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ 161 (256)
T 2etb_A 82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ 161 (256)
T ss_dssp CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 1124477999999999999999999999999999999886 9999999999999999999999 9
Q ss_pred CCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcc-------cccCCCCCChHHHHHhcCCHHHHH
Q psy8763 521 KANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACI-------NLKNNSNESPLHLAARYGRYNTVK 593 (641)
Q Consensus 521 g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~-------~~~~~~g~t~L~~A~~~~~~~~v~ 593 (641)
|++++.+|..|.||||+|+..+........ ...+++++|+++|+++ +.+|..|.||||+|+..|+.++|+
T Consensus 162 ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~---~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~ 238 (256)
T 2etb_A 162 PASLEATDSLGNTVLHALVMIADNSPENSA---LVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFR 238 (256)
T ss_dssp CCCTTCCCTTSCCHHHHHHHHCCSCHHHHH---HHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred CCCcCccCCCCCCHHHHHHHcccCCchhhH---HHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHH
Confidence 999999999999999999983322111000 0133999999999999 999999999999999999999999
Q ss_pred HHHhcCCC
Q psy8763 594 KLLSSERG 601 (641)
Q Consensus 594 ~Ll~~g~~ 601 (641)
+|+++|++
T Consensus 239 ~Ll~~g~~ 246 (256)
T 2etb_A 239 HILQREFS 246 (256)
T ss_dssp HHHHHHHH
T ss_pred HHHhCCCC
Confidence 99999976
No 52
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.4e-33 Score=262.88 Aligned_cols=222 Identities=20% Similarity=0.217 Sum_probs=177.9
Q ss_pred HHHhhcCChHHHHHHhcCCHHHHHHHHH----CCCCCC----CCCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCccc-
Q psy8763 388 SLFAAEGNLPLHSAVHGGDFKAVELCLK----SGAKIS----TQQFDLSTPVHLACSQ---GALDIVRLMFNLQPSEKL- 455 (641)
Q Consensus 388 ~~~~~~~~t~l~~a~~~~~~~~~~~Ll~----~g~~~~----~~~~~~~t~l~~a~~~---~~~~~v~~ll~~~~~~~~- 455 (641)
...+..|.||||.|+..|+.++++.|++ .+.+++ ..+..|.||||+|+.. |+.+++++|++.+.....
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~ 86 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence 4457789999999999999998888876 666665 4578899999999987 999999999996432110
Q ss_pred -----cccccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCC--------------CCCCHHHHHHhcCCHHHHHH
Q psy8763 456 -----VCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDK--------------EKRSPLLLAASRGGWKTVLT 516 (641)
Q Consensus 456 -----~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~--------------~g~t~L~~A~~~~~~~~v~~ 516 (641)
......+..|.||||+|+..++.+++++|+++|++++..+. .|.||||+|+..|+.+++++
T Consensus 87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 166 (273)
T 2pnn_A 87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKF 166 (273)
T ss_dssp HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHH
T ss_pred hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 01223567899999999999999999999999999999987 79999999999999999999
Q ss_pred HHH---cCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCccc-------ccCCCCCChHHHHHhc
Q psy8763 517 LVR---NKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACIN-------LKNNSNESPLHLAARY 586 (641)
Q Consensus 517 Ll~---~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~-------~~~~~g~t~L~~A~~~ 586 (641)
|++ +|++++.+|..|.||||+|+..+........ .-.+++++|+++|++++ .+|..|.||||+|+..
T Consensus 167 Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~---~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~ 243 (273)
T 2pnn_A 167 LLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTK---FVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASS 243 (273)
T ss_dssp HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHH---HHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT
T ss_pred HHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHH---HHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHh
Confidence 999 9999999999999999999998843221110 02789999999999997 4899999999999999
Q ss_pred CCHHHHHHHHhcCC-CccccccCCCCCChh
Q psy8763 587 GRYNTVKKLLSSER-GSFIINESDGEGLTP 615 (641)
Q Consensus 587 ~~~~~v~~Ll~~g~-~~~~~~~~d~~g~t~ 615 (641)
|+.++|++|+++|+ + .......+.+|
T Consensus 244 g~~~iv~~Ll~~ga~d---p~~~~~~~~~~ 270 (273)
T 2pnn_A 244 GKIGVLAYILQREIHE---PECRHAAAHHH 270 (273)
T ss_dssp TCHHHHHHHHHHHTC---------------
T ss_pred ChHHHHHHHHHCCCCC---chhhhhhhhhc
Confidence 99999999999999 5 44444444444
No 53
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=6.7e-33 Score=256.45 Aligned_cols=207 Identities=21% Similarity=0.205 Sum_probs=178.0
Q ss_pred hcCChHHHHHHhcCCHHH----HHHHHHCCCCCCCCC----CCCCcHHHHHH---HcCCHHHHHHHHhcCCCccc-----
Q psy8763 392 AEGNLPLHSAVHGGDFKA----VELCLKSGAKISTQQ----FDLSTPVHLAC---SQGALDIVRLMFNLQPSEKL----- 455 (641)
Q Consensus 392 ~~~~t~l~~a~~~~~~~~----~~~Ll~~g~~~~~~~----~~~~t~l~~a~---~~~~~~~v~~ll~~~~~~~~----- 455 (641)
..++++|+.|++.|+.+. +++|++.|++++..+ ..|.||||.|+ +.|+.+++++|++.+.....
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~ 82 (260)
T 3jxi_A 3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI 82 (260)
T ss_dssp CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence 357889999999999995 555555999998776 66999999999 77999999999986432111
Q ss_pred -cccccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCC--------------CCCCCHHHHHHhcCCHHHHHHHHH-
Q psy8763 456 -VCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLD--------------KEKRSPLLLAASRGGWKTVLTLVR- 519 (641)
Q Consensus 456 -~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~--------------~~g~t~L~~A~~~~~~~~v~~Ll~- 519 (641)
..++..+..|.||||+|+..|+.+++++|+++|++++..+ ..|+||||+|+..|+.+++++|++
T Consensus 83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~ 162 (260)
T 3jxi_A 83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN 162 (260)
T ss_dssp TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 2245556689999999999999999999999999999998 689999999999999999999999
Q ss_pred --cCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcc-------cccCCCCCChHHHHHhcCCHH
Q psy8763 520 --NKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACI-------NLKNNSNESPLHLAARYGRYN 590 (641)
Q Consensus 520 --~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~-------~~~~~~g~t~L~~A~~~~~~~ 590 (641)
+|++++.+|..|.||||+|+..+........ ...+++++|+++|+++ +.+|..|.||||+|+..|+.+
T Consensus 163 ~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~---~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~ 239 (260)
T 3jxi_A 163 GHKQADLRRQDSRGNTVLHALVAIADNTRENTK---FVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIG 239 (260)
T ss_dssp SSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHH---HHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred cccCCCCcccCCCCCcHHHHHHHhccCchhHHH---HHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999987743221110 0368999999999999 779999999999999999999
Q ss_pred HHHHHHhcCCC
Q psy8763 591 TVKKLLSSERG 601 (641)
Q Consensus 591 ~v~~Ll~~g~~ 601 (641)
+|++|+++|++
T Consensus 240 ~v~~Ll~~g~~ 250 (260)
T 3jxi_A 240 IFQHIIRREIA 250 (260)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHhCCC
Confidence 99999999976
No 54
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.98 E-value=2.1e-32 Score=253.08 Aligned_cols=222 Identities=15% Similarity=0.100 Sum_probs=176.1
Q ss_pred cCCCcchhhHHHhcCCHHH----HHHHHhcCCcccccc--CCCCCchHHHHHH---HcCCHHHHHHHHhcCCCcchhHhh
Q psy8763 29 NNKKQAVLHLATELNKVPI----LLILLQYKDMIDILQ--GGEHGRTALHIAA---IYDFDECARILVSEQPECDWIMVK 99 (641)
Q Consensus 29 ~~~~~t~L~~A~~~g~~~~----v~~ll~~g~~~~~~~--~~~~g~t~L~~A~---~~g~~~iv~~Ll~~~~~~~~~~~~ 99 (641)
+..++|+||.|++.|+.+. +++|++.|+.++... .+..|.||||+|+ ..|+.+++++|++.++...... .
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~-~ 80 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR-E 80 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHH-H
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchH-h
Confidence 5678999999999999995 555555888554322 2377999999999 7799999999999843211100 0
Q ss_pred hcCCCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhh-h-----hccccCCCChHHHHHHhCCCHHHHHHHH
Q psy8763 100 DFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREE-M-----ISLFDAEGNLPLHSAVHGGDFKAVELCL 173 (641)
Q Consensus 100 ~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-~-----~~~~~~~~~t~L~~A~~~g~~~~v~~Ll 173 (641)
-...+.+..+..|.||||+|+..|+.+++++|+++|++++..... + ....+..|.||||+|+..|+.++|++|+
T Consensus 81 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll 160 (260)
T 3jxi_A 81 FINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT 160 (260)
T ss_dssp HHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHH
T ss_pred hhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHH
Confidence 012445556679999999999999999999999999998543210 0 0011157999999999999999999999
Q ss_pred H---cCCCCCcCCCCCCcHHHHHHHcCc---------HHHHHHHHhcCCCccc--cccccCCCCCCcHHHHHHhcCcHHH
Q psy8763 174 K---SGAKISTQQFDLSTPVHLACSQGA---------LDIVRLMFNLQPSEKL--VCLNSTDAQKMTPLHCAAMFDRCDV 239 (641)
Q Consensus 174 ~---~g~~~~~~~~~~~t~l~~A~~~g~---------~~iv~~Ll~~~~~~~~--~~~~~~~~~~~t~L~~A~~~~~~~i 239 (641)
+ .|++++.++..|+||||+|+..++ .+++++|++++++... ...+..+..|.||||+|+..|+.++
T Consensus 161 ~~~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 240 (260)
T 3jxi_A 161 ENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGI 240 (260)
T ss_dssp HCSSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred hccccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHH
Confidence 9 999999999999999999999888 7999999999876210 0015689999999999999999999
Q ss_pred HHHHHHcCCCCC
Q psy8763 240 VQYLIDEGADLN 251 (641)
Q Consensus 240 v~~Ll~~g~~~~ 251 (641)
+++|+++|++..
T Consensus 241 v~~Ll~~g~~~~ 252 (260)
T 3jxi_A 241 FQHIIRREIADA 252 (260)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHhCCCcc
Confidence 999999997654
No 55
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=3e-33 Score=250.77 Aligned_cols=208 Identities=17% Similarity=0.131 Sum_probs=177.8
Q ss_pred HHHHHHCCCCCCCCCC---CCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCChhHHHHHHH
Q psy8763 410 VELCLKSGAKISTQQF---DLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLID 486 (641)
Q Consensus 410 ~~~Ll~~g~~~~~~~~---~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~ 486 (641)
++.|++.|++++..+. .+.||||.|+..|+.+++++|++.+. +++..+..|.||||+|+..++.+++++|++
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~ 75 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMN-----DPSQPNEEGITALHNAICGANYSIVDFLIT 75 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSS-----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCC-----CCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 4678888988876554 45678999999999999999999544 478899999999999999999999999999
Q ss_pred cCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccc-cCCCchhHHH--hhcCCCchhhHHHHHHHHHHHHHHh
Q psy8763 487 EGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKD-INRRNILHLL--VLNGGGHIKEFAEEVAAVFLGENLI 563 (641)
Q Consensus 487 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~a--~~~~~~~~~~~~~~~~~~~~~~~Ll 563 (641)
+|++++..+..|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+| +..+ +.+++++|+
T Consensus 76 ~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~------------~~~~v~~Ll 143 (229)
T 2vge_A 76 AGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREG------------YADCATYLA 143 (229)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTT------------HHHHHHHHH
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcC------------hHHHHHHHH
Confidence 999999999999999999999999999999999999999986 6999999999 8888 999999999
Q ss_pred hcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHhhCCcceeee-ceeeeecc
Q psy8763 564 NLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFHYSVSI-FQVTYVWC 638 (641)
Q Consensus 564 ~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~-l~~~~~~~ 638 (641)
++|++++.+|..|.||++.++..+. +++|++.|++ ..++.+|..|+|||++|+..|+.++|+. +++.+|..
T Consensus 144 ~~ga~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~-~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l~~~p~~ 215 (229)
T 2vge_A 144 DVEQSMGLMNSGAVYALWDYSAEFG---DELSFREGES-VTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPRV 215 (229)
T ss_dssp HHHHHTTTSGGGEEEESSCBCCSST---TBCCBCTTCE-EEEEESSCTTCSSEEEEEETTEEEEEEGGGEESSCCC
T ss_pred HcCCCcccccCCchHHHHHHhhccc---cccCcccccc-ccccccCCCcccHHHHHHHcCCcceeehhhhhhCCCC
Confidence 9999999999999999997665543 3688999987 2357789999999999999999999986 56667765
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=5.9e-32 Score=250.74 Aligned_cols=194 Identities=20% Similarity=0.190 Sum_probs=181.3
Q ss_pred cCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCC-Cccc
Q psy8763 29 NNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGA-SLKR 107 (641)
Q Consensus 29 ~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~-~~~~ 107 (641)
+..+++++|.|+..|+++.++.+++.+.+..++..|..|.||||+|+..|+.++|++|++. |+ +++.
T Consensus 73 ~~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~------------g~~~~~~ 140 (276)
T 4hbd_A 73 RLACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDS------------GVCKVDK 140 (276)
T ss_dssp HHHHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHT------------SCCCTTC
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHC------------CCCcCCC
Confidence 4456789999999999999999999887666889999999999999999999999999999 77 9999
Q ss_pred CCCCCCcHHHHHH-----HhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcC
Q psy8763 108 ACSNGYYPIHDAA-----KNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQ 182 (641)
Q Consensus 108 ~~~~g~t~L~~A~-----~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~ 182 (641)
.+..|.||||.|+ ..++.+++++|++.|... +..+..|.||||+|+..|+.++|++|++.|++++.+
T Consensus 141 ~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~--------~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~ 212 (276)
T 4hbd_A 141 QNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN--------AKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQ 212 (276)
T ss_dssp CCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT--------CCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc--------cccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC
Confidence 9999999999999 779999999999999776 456788999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHh-cCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHcC
Q psy8763 183 QFDLSTPVHLACSQGALDIVRLMFN-LQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEG 247 (641)
Q Consensus 183 ~~~~~t~l~~A~~~g~~~iv~~Ll~-~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g 247 (641)
+..|.||||+|+..|+.+++++|++ .+++ ++..+..|.|||++|+..|+.+++++|++++
T Consensus 213 d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad-----~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 213 DDDGSTALMCACEHGHKEIAGLLLAVPSCD-----ISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHTSTTCC-----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHhcCCCC-----CcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9999999999999999999999999 7777 6889999999999999999999999999975
No 57
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=5.5e-32 Score=237.27 Aligned_cols=162 Identities=28% Similarity=0.320 Sum_probs=146.5
Q ss_pred cccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHH
Q psy8763 458 LNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHL 537 (641)
Q Consensus 458 ~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 537 (641)
++.+|..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..++.+++++|+++|++++.++..|.||||+
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMW 107 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 46778889999999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred HhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHH
Q psy8763 538 LVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLH 617 (641)
Q Consensus 538 a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~ 617 (641)
|+..+ +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.|||+
T Consensus 108 A~~~~------------~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~ 172 (192)
T 2rfm_A 108 SIIFG------------YSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD---ISARDLTGLTAEA 172 (192)
T ss_dssp HHHHT------------CHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCBCTTSCBHHH
T ss_pred HHHcC------------CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHH
Confidence 99988 88899999999999999999999999999999999999999999988 8888999999999
Q ss_pred HHHhhCCcceeeeceee
Q psy8763 618 IASKEGFHYSVSIFQVT 634 (641)
Q Consensus 618 ~A~~~~~~~~~~~l~~~ 634 (641)
+|+..|+.+++++|++.
T Consensus 173 ~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 173 SARIFGRQEVIKIFTEV 189 (192)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHHHhCcHHHHHHHHhc
Confidence 99999999999888764
No 58
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=2.1e-31 Score=233.63 Aligned_cols=164 Identities=21% Similarity=0.180 Sum_probs=130.1
Q ss_pred ccccccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCC
Q psy8763 24 NTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGA 103 (641)
Q Consensus 24 ~~~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~ 103 (641)
.+|.+|..|+||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+..|+.+++++|+++ |+
T Consensus 27 ~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------g~ 92 (192)
T 2rfm_A 27 LRNYRDSYNRTPLMVACMLGMENAIDKLVENFD--KLEDKDIEGSTALIWAVKNNRLGIAEKLLSK------------GS 92 (192)
T ss_dssp HHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH------------TC
T ss_pred HHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhcc--ccccccccCccHHHHHHHcCCHHHHHHHHHC------------CC
Confidence 356678888888888888888888888888776 5556677788888888888888888888887 77
Q ss_pred CcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCC
Q psy8763 104 SLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQ 183 (641)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 183 (641)
+++..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 93 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~ 164 (192)
T 2rfm_A 93 NVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANV--------NDRNLEGETPLIVASKYGRSEIVKKLLELGADISARD 164 (192)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS--------SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC
T ss_pred CCCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC--------CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 77778888888888888888888888888888776 4557778888888888888888888888888888888
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHhcC
Q psy8763 184 FDLSTPVHLACSQGALDIVRLMFNLQ 209 (641)
Q Consensus 184 ~~~~t~l~~A~~~g~~~iv~~Ll~~~ 209 (641)
..|.||+++|+..|+.+++++|++++
T Consensus 165 ~~g~t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 165 LTGLTAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp TTSCBHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHhCcHHHHHHHHhcc
Confidence 88888888888888888888887653
No 59
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=2.3e-31 Score=228.88 Aligned_cols=170 Identities=26% Similarity=0.310 Sum_probs=152.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHH
Q psy8763 427 LSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAA 506 (641)
Q Consensus 427 ~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 506 (641)
+.+|||.|+..|+.+++++|++.++. .++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 77 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDN----LVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLAS 77 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSG----GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcc----cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHH
Confidence 35789999999999999999986543 37788999999999999999999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhc
Q psy8763 507 SRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARY 586 (641)
Q Consensus 507 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 586 (641)
..++.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|++++.+|..|.||||+|+..
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------------~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 145 (172)
T 3v30_A 78 TGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGN------------HVKCVEALLARGADLTTEADSGYTPMDLAVAL 145 (172)
T ss_dssp HTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTT------------CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC------------CHHHHHHHHHcCCCccccCCCCCCHHHHHHHh
Confidence 999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred CCHHHHHHHHhcCCCccccccCCCCCChh
Q psy8763 587 GRYNTVKKLLSSERGSFIINESDGEGLTP 615 (641)
Q Consensus 587 ~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~ 615 (641)
|+.+++++|+++|++ +...+..|.||
T Consensus 146 ~~~~~~~~L~~~~~~---~~~~~~~~~~p 171 (172)
T 3v30_A 146 GYRKVQQVIENHILK---LFQSNLVPADP 171 (172)
T ss_dssp TCHHHHHHHHHHHHH---HSCC-------
T ss_pred CcHHHHHHHHHHHHH---HhcccCCCCCC
Confidence 999999999999998 77788888887
No 60
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=3.3e-32 Score=252.46 Aligned_cols=187 Identities=24% Similarity=0.256 Sum_probs=122.4
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCChhHHHHHHHcCC-CCCcCCCCCCCHHHHHH--
Q psy8763 430 PVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGA-DLNVLDKEKRSPLLLAA-- 506 (641)
Q Consensus 430 ~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~-- 506 (641)
++|.|+..++.+.++.+++... ...+|..|..|.||||+|+..|+.+++++|+++|+ +++..+..|.||||+|+
T Consensus 79 ~l~~a~~~~~~~~~~~l~~~~~---~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~ 155 (276)
T 4hbd_A 79 DAHPELVRRHLVTFRAMSARLL---DYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALA 155 (276)
T ss_dssp TCCHHHHHHHHHHHHHHCHHHH---HHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGC
T ss_pred CCCHHHHHHHHHHHHHHHHHHH---hhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHH
Confidence 4455555556666655554211 11255666666677777777777777777776665 66666666677777666
Q ss_pred ---hcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHH
Q psy8763 507 ---SRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLA 583 (641)
Q Consensus 507 ---~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 583 (641)
..++.+++++|++.|.+++..+..|.||||+|+..+ +.+++++|+++|++++.+|..|.||||+|
T Consensus 156 ~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g------------~~~~v~~Ll~~gad~n~~d~~G~TpLh~A 223 (276)
T 4hbd_A 156 TLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHG------------RVDVVKALLACEADVNVQDDDGSTALMCA 223 (276)
T ss_dssp CCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTT------------CHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred HhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcC------------CHHHHHHHHhCCCCCCCCCCCCCCHHHHH
Confidence 445666666777666666666666677777777666 66667777777777776666777777777
Q ss_pred HhcCCHHHHHHHHh-cCCCccccccCCCCCChhHHHHHhhCCcceeeeceee
Q psy8763 584 ARYGRYNTVKKLLS-SERGSFIINESDGEGLTPLHIASKEGFHYSVSIFQVT 634 (641)
Q Consensus 584 ~~~~~~~~v~~Ll~-~g~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~l~~~ 634 (641)
+..|+.++|++|++ .|++ ++..|..|+|||++|+..|+.+++++|+++
T Consensus 224 ~~~g~~~iv~~Ll~~~gad---~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ 272 (276)
T 4hbd_A 224 CEHGHKEIAGLLLAVPSCD---ISLTDRDGSTALMVALDAGQSEIASMLYSR 272 (276)
T ss_dssp HHHTCHHHHHHHHTSTTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHhcCCCC---CcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 77777777777776 6666 666666777777777777777776666654
No 61
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=8.8e-31 Score=225.19 Aligned_cols=170 Identities=23% Similarity=0.245 Sum_probs=139.2
Q ss_pred CcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCCC
Q psy8763 32 KQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSN 111 (641)
Q Consensus 32 ~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~ 111 (641)
+.||||+|+..|+.+++++|++.|.. .++..+..|.||||+|+..|+.+++++|+++ |++++..+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------g~~~~~~~~~ 68 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDN-LVNKPDERGFTPLIWASAFGEIETVRFLLEW------------GADPHILAKE 68 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSG-GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH------------TCCTTCCCTT
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcc-cccCCCCCCCCHHHHHHHcCCHHHHHHHHHc------------CCCchhhccc
Confidence 46899999999999999999998863 3677788899999999999999999999988 8888888888
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHHH
Q psy8763 112 GYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVH 191 (641)
Q Consensus 112 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l~ 191 (641)
|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++|++++.++..|.|||+
T Consensus 69 g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 140 (172)
T 3v30_A 69 RESALSLASTGGYTDIVGLLLERDVDI--------NIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMD 140 (172)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHTTTCCT--------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCC--------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 999999999999999999999888886 456788889999999999999999999999988888888888888
Q ss_pred HHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcH
Q psy8763 192 LACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTP 227 (641)
Q Consensus 192 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~ 227 (641)
+|+..|+.+++++|++++++ +...+..+.||
T Consensus 141 ~A~~~~~~~~~~~L~~~~~~-----~~~~~~~~~~p 171 (172)
T 3v30_A 141 LAVALGYRKVQQVIENHILK-----LFQSNLVPADP 171 (172)
T ss_dssp HHHHHTCHHHHHHHHHHHHH-----HSCC-------
T ss_pred HHHHhCcHHHHHHHHHHHHH-----HhcccCCCCCC
Confidence 88888888888888888776 34555555554
No 62
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=3.9e-31 Score=226.16 Aligned_cols=157 Identities=27% Similarity=0.278 Sum_probs=81.6
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHH
Q psy8763 427 LSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAA 506 (641)
Q Consensus 427 ~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 506 (641)
|.||||.|+..|+.+++++|++.+ .+++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+
T Consensus 3 ~~t~L~~A~~~g~~~~v~~ll~~~-----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 77 (167)
T 3v31_A 3 NSLSVHQLAAQGEMLYLATRIEQE-----NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLAC 77 (167)
T ss_dssp TCCCHHHHHHTTCHHHHHHHHHHS-----SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CcchHHHHHHCCCHHHHHHHHHcC-----CCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHH
Confidence 445555555555555555555432 224444555555555555555555555555555555555555555555555
Q ss_pred hcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhc
Q psy8763 507 SRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARY 586 (641)
Q Consensus 507 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 586 (641)
..++.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|++++.+|..|.|||++|+..
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------------~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~ 145 (167)
T 3v31_A 78 SKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGN------------HVKCVKMLLESGADPTIETDSGYNSMDLAVAL 145 (167)
T ss_dssp HHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTT------------CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcC------------CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 555555555555555555555555555555555555 45555555555555555555555555555555
Q ss_pred CCHHHHHHHHhcCC
Q psy8763 587 GRYNTVKKLLSSER 600 (641)
Q Consensus 587 ~~~~~v~~Ll~~g~ 600 (641)
|+.+++++|+++++
T Consensus 146 ~~~~~~~~L~~~~~ 159 (167)
T 3v31_A 146 GYRSVQQVIESHLL 159 (167)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH
Confidence 55555555555443
No 63
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=2.4e-30 Score=221.30 Aligned_cols=160 Identities=26% Similarity=0.332 Sum_probs=127.6
Q ss_pred ccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCccc
Q psy8763 28 LNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKR 107 (641)
Q Consensus 28 ~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~ 107 (641)
....+.|+|++|++.|+.+++++|+++|+ +++..+..|.||||+|+..|+.+++++|+++ |++++.
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------g~~~~~ 75 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMANGA--DVNAEDASGWTPLHLAAFNGHLEIVEVLLKN------------GADVNA 75 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT------------TCCTTC
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHCCC--CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc------------CCCCCc
Confidence 34556788888888888888888888886 5566777888888888888888888888887 778888
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCC
Q psy8763 108 ACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLS 187 (641)
Q Consensus 108 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 187 (641)
.+..|.||||.|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++|++++.++..|.
T Consensus 76 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~--------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~ 147 (169)
T 2y1l_E 76 VDHAGMTPLRLAALFGHLEIVEVLLKNGADV--------NANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGK 147 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT--------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC
Confidence 8888888888888888888888888888776 45577788888888888888888888888888888888888
Q ss_pred cHHHHHHHcCcHHHHHHHHhcC
Q psy8763 188 TPVHLACSQGALDIVRLMFNLQ 209 (641)
Q Consensus 188 t~l~~A~~~g~~~iv~~Ll~~~ 209 (641)
|||++|+..|+.+++++|+++|
T Consensus 148 t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 148 TAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHTC-
T ss_pred CHHHHHHHhCCHHHHHHHHHcC
Confidence 8888888888888888887653
No 64
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=3.1e-30 Score=220.56 Aligned_cols=160 Identities=20% Similarity=0.224 Sum_probs=144.6
Q ss_pred CCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCC
Q psy8763 30 NKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRAC 109 (641)
Q Consensus 30 ~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~ 109 (641)
..|.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+..|+.+++++|+++ |++++..+
T Consensus 1 G~~~t~L~~A~~~g~~~~v~~ll~~~~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------g~~~~~~~ 66 (167)
T 3v31_A 1 GANSLSVHQLAAQGEMLYLATRIEQEN--VINHTDEEGFTPLMWAAAHGQIAVVEFLLQN------------GADPQLLG 66 (167)
T ss_dssp CTTCCCHHHHHHTTCHHHHHHHHHHSS--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT------------TCCTTCCC
T ss_pred CCCcchHHHHHHCCCHHHHHHHHHcCC--CcCCCCCCCCCHHHHHHHCCCHHHHHHHHHc------------CCCCCCcC
Confidence 358899999999999999999999986 5677888999999999999999999999998 88899899
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcH
Q psy8763 110 SNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTP 189 (641)
Q Consensus 110 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~ 189 (641)
..|.||||.|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++|++++.++..|.||
T Consensus 67 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 138 (167)
T 3v31_A 67 KGRESALSLACSKGYTDIVKMLLDCGVDV--------NEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNS 138 (167)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHHTCCT--------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCCCC--------CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 99999999999999999999999999887 4568889999999999999999999999999999999999999
Q ss_pred HHHHHHcCcHHHHHHHHhcCCC
Q psy8763 190 VHLACSQGALDIVRLMFNLQPS 211 (641)
Q Consensus 190 l~~A~~~g~~~iv~~Ll~~~~~ 211 (641)
|++|+..|+.+++++|++++..
T Consensus 139 l~~A~~~~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 139 MDLAVALGYRSVQQVIESHLLK 160 (167)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHHHHH
Confidence 9999999999999999987654
No 65
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=4.8e-31 Score=225.67 Aligned_cols=156 Identities=32% Similarity=0.367 Sum_probs=108.0
Q ss_pred CCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcC
Q psy8763 463 AQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNG 542 (641)
Q Consensus 463 ~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~ 542 (641)
..+.++|+.|+..|+.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 12 ~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~ 91 (169)
T 2y1l_E 12 SDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFG 91 (169)
T ss_dssp -CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 34456677777777777777777777777666666777777777777777777777777777666666777777777666
Q ss_pred CCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHhh
Q psy8763 543 GGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKE 622 (641)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~~ 622 (641)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.|||++|+..
T Consensus 92 ------------~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~ 156 (169)
T 2y1l_E 92 ------------HLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD---VNAQDKFGKTAFDISIDN 156 (169)
T ss_dssp ------------CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHT
T ss_pred ------------CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHh
Confidence 66677777777777776676777777777777777777777777766 666666777777777777
Q ss_pred CCcceeeecee
Q psy8763 623 GFHYSVSIFQV 633 (641)
Q Consensus 623 ~~~~~~~~l~~ 633 (641)
|+.+++++|++
T Consensus 157 ~~~~~~~~L~~ 167 (169)
T 2y1l_E 157 GNEDLAEILQK 167 (169)
T ss_dssp TCHHHHHHHHT
T ss_pred CCHHHHHHHHH
Confidence 77777666654
No 66
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=4e-30 Score=218.85 Aligned_cols=156 Identities=30% Similarity=0.376 Sum_probs=87.5
Q ss_pred CcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCCC
Q psy8763 32 KQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSN 111 (641)
Q Consensus 32 ~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~ 111 (641)
..||||+|++.|+.+++++|+++|+ +++..+..|.||||+|+. |+.+++++|+++ |++++..+..
T Consensus 5 ~~~~L~~A~~~g~~~~v~~Ll~~~~--~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~------------g~~~~~~~~~ 69 (162)
T 1ihb_A 5 WGNELASAAARGDLEQLTSLLQNNV--NVNAQNGFGRTALQVMKL-GNPEIARRLLLR------------GANPDLKDRT 69 (162)
T ss_dssp CHHHHHHHHHHTCHHHHHHHTTSCC--CTTCCCTTSCCHHHHCCS-SCHHHHHHHHHT------------TCCTTCCCTT
T ss_pred HhhHHHHHHHcCCHHHHHHHHhCCC--CccccCccCccHHHHHHc-CcHHHHHHHHHc------------CCCCCCCCCC
Confidence 4456666666666666666665554 344455556666666555 666666666655 5555555555
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCC-CCcCCCCCCcHH
Q psy8763 112 GYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAK-ISTQQFDLSTPV 190 (641)
Q Consensus 112 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~~t~l 190 (641)
|.||||.|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++|++ ++..+..|.|||
T Consensus 70 g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l 141 (162)
T 1ihb_A 70 GFAVIHDAARAGFLDTLQTLLEFQADV--------NIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTAC 141 (162)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCT--------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCC--------CCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHH
Confidence 555555555555555555555555554 23445555555555555555555555555554 355555555555
Q ss_pred HHHHHcCcHHHHHHHHhcCC
Q psy8763 191 HLACSQGALDIVRLMFNLQP 210 (641)
Q Consensus 191 ~~A~~~g~~~iv~~Ll~~~~ 210 (641)
++|+..|+.+++++|+++|+
T Consensus 142 ~~A~~~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 142 DLARLYGRNEVVSLMQANGA 161 (162)
T ss_dssp HHHHHTTCHHHHHHHHHTC-
T ss_pred HHHHHcCCHHHHHHHHHhCC
Confidence 55555555555555555443
No 67
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=5.5e-30 Score=218.01 Aligned_cols=159 Identities=19% Similarity=0.236 Sum_probs=149.4
Q ss_pred CCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhh
Q psy8763 66 HGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEM 145 (641)
Q Consensus 66 ~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 145 (641)
...||||.|+..|+.+++++|+++ |++++..+..|.||||.|+. |+.+++++|+++|+++
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~------------~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~------- 63 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQN------------NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANP------- 63 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTS------------CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-------
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhC------------CCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-------
Confidence 467999999999999999999998 89999999999999999999 9999999999999987
Q ss_pred hccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCC
Q psy8763 146 ISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKM 225 (641)
Q Consensus 146 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~ 225 (641)
+..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++++.. ++..+..|.
T Consensus 64 -~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~~~~g~ 138 (162)
T 1ihb_A 64 -DLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN----VGHRNHKGD 138 (162)
T ss_dssp -TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC----TTCCCTTSC
T ss_pred -CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC----CCCcCCCCC
Confidence 456889999999999999999999999999999999999999999999999999999999999875 578899999
Q ss_pred cHHHHHHhcCcHHHHHHHHHcCCC
Q psy8763 226 TPLHCAAMFDRCDVVQYLIDEGAD 249 (641)
Q Consensus 226 t~L~~A~~~~~~~iv~~Ll~~g~~ 249 (641)
|||++|+..|+.+++++|+++|++
T Consensus 139 t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 139 TACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTC--
T ss_pred cHHHHHHHcCCHHHHHHHHHhCCC
Confidence 999999999999999999999985
No 68
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=2e-30 Score=217.83 Aligned_cols=150 Identities=25% Similarity=0.239 Sum_probs=118.7
Q ss_pred CcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCc
Q psy8763 466 MTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGH 545 (641)
Q Consensus 466 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~ 545 (641)
.++|+.|+..|+.+++++|+++|++++ .+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..+
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--- 78 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEG--- 78 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHT---
T ss_pred cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC---
Confidence 467788888888888888888777766 4677778888888888888888888888888777777888888888777
Q ss_pred hhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHhhCCc
Q psy8763 546 IKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFH 625 (641)
Q Consensus 546 ~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~~~~~ 625 (641)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.|||++|+..|+.
T Consensus 79 ---------~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~ 146 (153)
T 1awc_B 79 ---------HANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD---VHTQSKFCKTAFDISIDNGNE 146 (153)
T ss_dssp ---------CHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCH
T ss_pred ---------hHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCHHHHHHHcCCH
Confidence 77788888888888888888888888888888888888888888877 777777888888888888887
Q ss_pred ceeeec
Q psy8763 626 YSVSIF 631 (641)
Q Consensus 626 ~~~~~l 631 (641)
+++++|
T Consensus 147 ~i~~~L 152 (153)
T 1awc_B 147 DLAEIL 152 (153)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 777766
No 69
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=1.5e-29 Score=212.40 Aligned_cols=151 Identities=24% Similarity=0.270 Sum_probs=138.9
Q ss_pred CcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCCC
Q psy8763 32 KQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSN 111 (641)
Q Consensus 32 ~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~ 111 (641)
..|+|+.|++.|+.+++++|+++|++++ .+..|.||||+|+..|+.+++++|+++ |++++..+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~---~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------g~~~~~~~~~ 66 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT---TDWLGTSPLHLAAQYGHFSTTEVLLRA------------GVSRDARTKV 66 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC---CCTTCCCHHHHHHHHTCHHHHHHHHTT------------TCCTTCCCTT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC---cCCCCCCHHHHHHHcCCHHHHHHHHHc------------CCCCCCCCCC
Confidence 4689999999999999999999998543 477899999999999999999999998 8899999999
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHHH
Q psy8763 112 GYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVH 191 (641)
Q Consensus 112 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l~ 191 (641)
|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++|++++.++..|.|||+
T Consensus 67 g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 138 (153)
T 1awc_B 67 DRTPLHMAASEGHANIVEVLLKHGADV--------NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFD 138 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCT--------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCHHHHHHHcChHHHHHHHHHcCCCC--------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 999999999999999999999999987 456888999999999999999999999999999999999999999
Q ss_pred HHHHcCcHHHHHHH
Q psy8763 192 LACSQGALDIVRLM 205 (641)
Q Consensus 192 ~A~~~g~~~iv~~L 205 (641)
+|+..|+.+++++|
T Consensus 139 ~A~~~~~~~i~~~L 152 (153)
T 1awc_B 139 ISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99999999999887
No 70
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=9.1e-30 Score=220.18 Aligned_cols=166 Identities=28% Similarity=0.337 Sum_probs=145.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHH
Q psy8763 426 DLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLA 505 (641)
Q Consensus 426 ~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 505 (641)
++.++|+.|+..|+.+++++|++..+ .+++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 79 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTE----NDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLA 79 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTT----SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCc----ccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 46688999999999999999998543 34778888999999999999999999999999999999999999999999
Q ss_pred HhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHh
Q psy8763 506 ASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAAR 585 (641)
Q Consensus 506 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~ 585 (641)
+..++.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|++++.+|..|.|||++|+.
T Consensus 80 ~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~------------~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~ 147 (179)
T 3f6q_A 80 ASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWG------------QDQVAEDLVANGALVSICNKYGEMPVDKAKA 147 (179)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------------CHHHHHHHHHTTCCSSBCCTTSCCGGGGSCH
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC------------CHHHHHHHHHCCCCcchhccCCCCcHHHHHH
Confidence 9999999999999999999999999999999999998 8899999999999999999999999999999
Q ss_pred cCCHHHHHHHHhcCCCccccccCCC
Q psy8763 586 YGRYNTVKKLLSSERGSFIINESDG 610 (641)
Q Consensus 586 ~~~~~~v~~Ll~~g~~~~~~~~~d~ 610 (641)
.++.+++++|++.|++ ++..+.
T Consensus 148 ~~~~~~~~~L~~~g~~---~~~~~~ 169 (179)
T 3f6q_A 148 PLRELLRERAEKMGQN---LNRIPY 169 (179)
T ss_dssp HHHHHHHHHHHHTTCC---CSCBCC
T ss_pred HHHHHHHHHHHHhhcC---cccCCc
Confidence 9999999999999998 554443
No 71
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=8e-30 Score=217.50 Aligned_cols=160 Identities=27% Similarity=0.366 Sum_probs=139.4
Q ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHH
Q psy8763 424 QFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLL 503 (641)
Q Consensus 424 ~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 503 (641)
+..+.++|+.|+..|+.+++++|++..+ ..++..+..|.||||+|+..++.+++++|+++|++++..+..|+||||
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~----~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 80 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQS----VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLH 80 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTTT----TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcCC----CCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHH
Confidence 4566788999999999999999987543 346677788889999999999999999999999999999999999999
Q ss_pred HHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHH
Q psy8763 504 LAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLA 583 (641)
Q Consensus 504 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 583 (641)
+|+..++.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|++++.+|..|.||||+|
T Consensus 81 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------------~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a 148 (165)
T 3twr_A 81 NACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKG------------KYEICKLLLQHGADPTKKNRDGNTPLDLV 148 (165)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT------------CHHHHHHHHHTTCCTTCCCTTSCCTGGGS
T ss_pred HHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcC------------CHHHHHHHHHcCCCCcccCCCCCChhHhH
Confidence 999999999999999999999999999999999999998 88999999999999999999999999997
Q ss_pred HhcCCHHHHHHHHhcCC
Q psy8763 584 ARYGRYNTVKKLLSSER 600 (641)
Q Consensus 584 ~~~~~~~~v~~Ll~~g~ 600 (641)
+. ++.+++++|+++||
T Consensus 149 ~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 149 KD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CT-TCHHHHHHHHTC--
T ss_pred hc-CChHHHHHHhhccc
Confidence 76 88899999998886
No 72
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=2.3e-32 Score=245.01 Aligned_cols=202 Identities=19% Similarity=0.143 Sum_probs=173.6
Q ss_pred HHHHhccccccCChHHHhHHHhhcCChHHHHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhc
Q psy8763 370 EVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNL 449 (641)
Q Consensus 370 ~~ll~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~ 449 (641)
+.|++.|++++... ..+..+.|+|+.|+..|+.+++++|++.|++++..+..|.||||.|+..|+.+++++|++.
T Consensus 2 ~~ll~~~~~~~~~~-----~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ 76 (229)
T 2vge_A 2 RSVLRKAGSPRKAR-----RARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITA 76 (229)
T ss_dssp --------CCCCCC-----CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred eehhccCCCCcccc-----ccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 45666666654332 2245677899999999999999999999999999999999999999999999999999995
Q ss_pred CCCccccccccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCC-CCCCCHHHHH--HhcCCHHHHHHHHHcCCCccc
Q psy8763 450 QPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLD-KEKRSPLLLA--ASRGGWKTVLTLVRNKANILL 526 (641)
Q Consensus 450 ~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A--~~~~~~~~v~~Ll~~g~~~~~ 526 (641)
+ .+++..|..|.||||+|+..++.+++++|+++|++++..+ ..|+||||+| +..++.+++++|+++|++++.
T Consensus 77 g-----a~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~ 151 (229)
T 2vge_A 77 G-----ANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGL 151 (229)
T ss_dssp T-----CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTT
T ss_pred C-----CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccc
Confidence 4 4588999999999999999999999999999999999986 6999999999 999999999999999999999
Q ss_pred cccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCc--ccccCCCCCChHHHHHhcCCHHHHHHHH
Q psy8763 527 KDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGAC--INLKNNSNESPLHLAARYGRYNTVKKLL 596 (641)
Q Consensus 527 ~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 596 (641)
+|..|.|+++.++... ..++|++.|++ ++.+|..|+||||+|+.+|+.++|+.++
T Consensus 152 ~~~~~~~~l~~~~~~~---------------~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~ 208 (229)
T 2vge_A 152 MNSGAVYALWDYSAEF---------------GDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY 208 (229)
T ss_dssp SGGGEEEESSCBCCSS---------------TTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGG
T ss_pred ccCCchHHHHHHhhcc---------------ccccCccccccccccccCCCcccHHHHHHHcCCcceeehhh
Confidence 9999999998765554 22678899988 7788999999999999999999998644
No 73
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=7.3e-30 Score=217.74 Aligned_cols=161 Identities=24% Similarity=0.308 Sum_probs=121.6
Q ss_pred ccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCccc
Q psy8763 28 LNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKR 107 (641)
Q Consensus 28 ~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~ 107 (641)
.|..|.||||.|++.|+.+++++|++.+. .+++..+..|.||||+|+..|+.+++++|+++ |++++.
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------g~~~~~ 70 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQS-VNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQH------------GADVHA 70 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTT-TTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT------------TCCTTC
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCC-CCccccccCCCCHHHHHHHcChHHHHHHHHhc------------CCCCCc
Confidence 35667788888888888888888887554 45666677777888888888888888888887 777777
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCC
Q psy8763 108 ACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLS 187 (641)
Q Consensus 108 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~ 187 (641)
.+..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++|++++.++..|.
T Consensus 71 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 142 (165)
T 3twr_A 71 KDKGGLVPLHNACSYGHYEVAELLVKHGAVV--------NVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGN 142 (165)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT--------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC--------CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence 7778888888888888888888888877776 44567777888888888888888888888888877777777
Q ss_pred cHHHHHHHcCcHHHHHHHHhcCC
Q psy8763 188 TPVHLACSQGALDIVRLMFNLQP 210 (641)
Q Consensus 188 t~l~~A~~~g~~~iv~~Ll~~~~ 210 (641)
|||++|+. |+.+++++|++.++
T Consensus 143 t~l~~a~~-~~~~i~~~L~~~gA 164 (165)
T 3twr_A 143 TPLDLVKD-GDTDIQDLLRGDAA 164 (165)
T ss_dssp CTGGGSCT-TCHHHHHHHHTC--
T ss_pred ChhHhHhc-CChHHHHHHhhccc
Confidence 88877665 77777777776553
No 74
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=2.3e-32 Score=261.28 Aligned_cols=297 Identities=10% Similarity=0.016 Sum_probs=195.9
Q ss_pred CCcchhhHHHh-cCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCC
Q psy8763 31 KKQAVLHLATE-LNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRAC 109 (641)
Q Consensus 31 ~~~t~L~~A~~-~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~ 109 (641)
.+.+++++|.. .++.+++++++++|. ++.||||.|++.|+.++|++|+++++.. ...+..+
T Consensus 64 ~~ll~~~~a~~~~~~~~~~~~l~~~g~---------~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~---------~~~~~~~ 125 (376)
T 2aja_A 64 RQLLCLYYAHYNRNAKQLWSDAHKKGI---------KSEVICFVAAITGCSSALDTLCLLLTSD---------EIVKVIQ 125 (376)
T ss_dssp HHHHHHHHHHTTTTCTTHHHHHHHHTC---------CHHHHHHHHHHHCCHHHHHHHTTC--CC---------SSCC--C
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHcCC---------CcCCHHHHHHHcCCHHHHHHHHHcCCcH---------HHHHHhc
Confidence 35678888877 588999999999875 2459999999999999999999983210 0112334
Q ss_pred CCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCc--CCCCCC
Q psy8763 110 SNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKIST--QQFDLS 187 (641)
Q Consensus 110 ~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~~~~~ 187 (641)
..|.||||+|+..|+.++|++|+++|+++.. .+..+.+ .||||+|+..|+.++|++|+++|++++. .+..|.
T Consensus 126 ~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~-----~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~ 199 (376)
T 2aja_A 126 AENYQAFRLAAENGHLHVLNRLCELAPTEIM-----AMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENY 199 (376)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHSCTTTHH-----HHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-----cccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCC
Confidence 5677999999999999999999999975310 0112222 8999999999999999999999999887 888899
Q ss_pred cHHHHHH-HcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCCCccCCCCCCHHHHHHH
Q psy8763 188 TPVHLAC-SQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAAS 266 (641)
Q Consensus 188 t~l~~A~-~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~~~~~~t~l~~a~~ 266 (641)
||||+|+ ..|+.++|++|+++++ .+.|||+.|+..|+.+++++|+++|++++..+. +++.|+.
T Consensus 200 TpL~~Aa~~~G~~eiv~~Ll~~ga------------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~----~l~~A~~ 263 (376)
T 2aja_A 200 YAFRWAAVGRGHHNVINFLLDCPV------------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHD----AFKLSNP 263 (376)
T ss_dssp HHHHHHHSTTCCHHHHHHHTTSHH------------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHT----TTTTTSS
T ss_pred CHHHHHHHHCCCHHHHHHHHhCCC------------ccchHHHHHHHCCCHHHHHHHHhcCcccccccH----HHHHHHH
Confidence 9999999 9999999999998542 278999999999999999999999988765432 4444555
Q ss_pred cCCcccccccccccccCchhHHHHHHh---cCChhHHHHHhhCCCccc---ccCCCCCcchHHHHHHHhCcHHHHHHHHH
Q psy8763 267 RGGWKTNGVNTRILNNKKQAVLHLATE---LNKVPILLILLQYKDMID---ILQGGEHGRTALHIAAIYDFDECARILVK 340 (641)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~l~~a~~---~~~~~~~~~ll~~~~~~~---~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~ 340 (641)
.++.+...... .......+..... .+..+.+++|++.+.... .......+.++|++|+..|+.+++++|+
T Consensus 264 ~g~~~vv~~~~---~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl- 339 (376)
T 2aja_A 264 DGVFDLVTKSE---CLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLL- 339 (376)
T ss_dssp SSCCCCSSHHH---HHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHT-
T ss_pred CCChhhhcHHh---hhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHH-
Confidence 55443211000 0000001111112 223456677776432100 0111234568899999999999999998
Q ss_pred hcCccccccccCCCChHHHHHHcCChHHHHHHHh
Q psy8763 341 DFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQ 374 (641)
Q Consensus 341 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~ll~ 374 (641)
..+ ...+..+.+++.+|-..|..++.+.-+.
T Consensus 340 ~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (376)
T 2aja_A 340 SIP---SVLALTKANNYYINETGGRLDLRAVALE 370 (376)
T ss_dssp TSH---HHHHSCC---------------------
T ss_pred cCh---HHHHHHHHhccccccccccccHHHHHHH
Confidence 332 4555678888888888888777665443
No 75
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=2.6e-29 Score=217.34 Aligned_cols=160 Identities=21% Similarity=0.221 Sum_probs=101.3
Q ss_pred CCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCC
Q psy8763 31 KKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACS 110 (641)
Q Consensus 31 ~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~ 110 (641)
.+.++||.|++.|+.+++++|++.+. .+++..+..|.||||+|+..|+.+++++|+++ |++++..+.
T Consensus 4 ~~~~~l~~A~~~g~~~~v~~ll~~~~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------g~~~~~~~~ 70 (179)
T 3f6q_A 4 EFMDDIFTQCREGNAVAVRLWLDNTE-NDLNQGDDHGFSPLHWACREGRSAVVEMLIMR------------GARINVMNR 70 (179)
T ss_dssp ---CCHHHHHHHTCHHHHHHHHHCTT-SCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT------------TCCTTCCCT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHhcCc-ccccccCCCCCCHHHHHHHcCcHHHHHHHHHc------------CCCCCCcCC
Confidence 45666666666666666666666643 24555666666666666666666666666666 666666666
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHH
Q psy8763 111 NGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPV 190 (641)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l 190 (641)
.|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++|++++.++..|.|||
T Consensus 71 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl 142 (179)
T 3f6q_A 71 GDDTPLHLAASHGHRDIVQKLLQYKADI--------NAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPV 142 (179)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCT--------TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGG
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC--------CccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcH
Confidence 6666666666666666666666666665 34455666666666666666666666666666666666666666
Q ss_pred HHHHHcCcHHHHHHHHhcCCC
Q psy8763 191 HLACSQGALDIVRLMFNLQPS 211 (641)
Q Consensus 191 ~~A~~~g~~~iv~~Ll~~~~~ 211 (641)
++|+..++.+++++|++++++
T Consensus 143 ~~A~~~~~~~~~~~L~~~g~~ 163 (179)
T 3f6q_A 143 DKAKAPLRELLRERAEKMGQN 163 (179)
T ss_dssp GGSCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHhhcC
Confidence 666666666666666666555
No 76
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=6.8e-30 Score=215.76 Aligned_cols=150 Identities=24% Similarity=0.294 Sum_probs=72.7
Q ss_pred cHHHHHHhcCChhHHHHHHHc-CCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCc
Q psy8763 467 TPLHCAAMFDRCDVVQYLIDE-GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGH 545 (641)
Q Consensus 467 t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~ 545 (641)
||||.|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 4 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~--- 79 (156)
T 1bd8_A 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTG--- 79 (156)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT---
T ss_pred hHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC---
Confidence 444444444444444444444 22444444444444444 4444444444444444444444444444444444444
Q ss_pred hhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHhhCCc
Q psy8763 546 IKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFH 625 (641)
Q Consensus 546 ~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~~~~~ 625 (641)
+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++. ++ ++..|..|.|||++|+..|+.
T Consensus 80 ---------~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~---~~~~~~~g~t~l~~A~~~~~~ 146 (156)
T 1bd8_A 80 ---------FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD---LHRRDARGLTPLELALQRGAQ 146 (156)
T ss_dssp ---------CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC---TTCCCTTSCCHHHHHHHSCCH
T ss_pred ---------cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC---CCCcCCCCCCHHHHHHHcCcH
Confidence 44444444444444444444445555555554555555555444 43 444444455555555555554
Q ss_pred ceeeecee
Q psy8763 626 YSVSIFQV 633 (641)
Q Consensus 626 ~~~~~l~~ 633 (641)
+++++|++
T Consensus 147 ~~v~~Ll~ 154 (156)
T 1bd8_A 147 DLVDILQG 154 (156)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 44444443
No 77
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=5.2e-29 Score=210.30 Aligned_cols=154 Identities=26% Similarity=0.369 Sum_probs=125.7
Q ss_pred CcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCCC
Q psy8763 32 KQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSN 111 (641)
Q Consensus 32 ~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~ 111 (641)
+.||||+|++.|+.+++++|++. ...+++..+..|.||||+ +..|+.+++++|+++ |++++..+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~------------g~~~~~~~~~ 67 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV-MMFGSTAIALELLKQ------------GASPNVQDTS 67 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHT------------TCCTTCCCTT
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHC------------CCCCCCcCCC
Confidence 56788888888888888888887 435667777888888888 888888888888887 8888888888
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHHH
Q psy8763 112 GYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVH 191 (641)
Q Consensus 112 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l~ 191 (641)
|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|++. ++++.++..|.|||+
T Consensus 68 g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~ 138 (156)
T 1bd8_A 68 GTSPVHDAARTGFLDTLKVLVEHGADV--------NVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLE 138 (156)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHTTCCS--------CCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHH
T ss_pred CCCHHHHHHHcCcHHHHHHHHHcCCCC--------CCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHH
Confidence 888888888888888888888888776 45577788888888888888888888888 888888888888888
Q ss_pred HHHHcCcHHHHHHHHhc
Q psy8763 192 LACSQGALDIVRLMFNL 208 (641)
Q Consensus 192 ~A~~~g~~~iv~~Ll~~ 208 (641)
+|+..|+.+++++|+++
T Consensus 139 ~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 139 LALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHSCCHHHHHHHHTT
T ss_pred HHHHcCcHHHHHHHHhh
Confidence 88888888888888764
No 78
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=1.1e-31 Score=256.51 Aligned_cols=249 Identities=15% Similarity=0.077 Sum_probs=118.0
Q ss_pred ChHHHHHHcCChHHHHHHHhccccccCChHHHhHHHhhcCChHHHHHHhcCCHHHHHHHHHCCCCC---CCCCCCCCcHH
Q psy8763 355 YPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGDFKAVELCLKSGAKI---STQQFDLSTPV 431 (641)
Q Consensus 355 ~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~---~~~~~~~~t~l 431 (641)
||||.|+..|+.+++++|++.|+.... ....+..+.||||+|+..|+.+++++|+++|+++ +..+.+ .|||
T Consensus 94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~-----~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpL 167 (376)
T 2aja_A 94 VICFVAAITGCSSALDTLCLLLTSDEI-----VKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAF 167 (376)
T ss_dssp HHHHHHHHHCCHHHHHHHTTC--CCSS-----CC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCcHHH-----HHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHH
Confidence 455555555555555555554441100 0011122344555555555555555555555431 111111 5555
Q ss_pred HHHHHcCCHHHHHHHHhcCCCcccccccc--CCCCCCcHHHHHH-hcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhc
Q psy8763 432 HLACSQGALDIVRLMFNLQPSEKLVCLNS--TDAQKMTPLHCAA-MFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASR 508 (641)
Q Consensus 432 ~~a~~~~~~~~v~~ll~~~~~~~~~~~~~--~~~~~~t~L~~A~-~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 508 (641)
|.|+..|+.+++++|++.+++ ++. .+..|.||||+|+ ..|+.++|++|+++|+ .|.|||++|+..
T Consensus 168 h~Aa~~G~~eiv~~Ll~~ga~-----~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~ 235 (376)
T 2aja_A 168 RLAAENGHLHVLNRLCELAPT-----EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEY 235 (376)
T ss_dssp HHHHHTTCHHHHHHHHHSCGG-----GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTT
T ss_pred HHHHHCCCHHHHHHHHHcCCc-----cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHC
Confidence 555555555555555553322 222 3444556666666 6666666666655543 145566666666
Q ss_pred CCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHH---------------HHHHHHHHhh---------
Q psy8763 509 GGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVA---------------AVFLGENLIN--------- 564 (641)
Q Consensus 509 ~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~---------------~~~~~~~Ll~--------- 564 (641)
|+.+++++|+++|++++..+ ++++.|+.+|...+.+...... ..+.+++|++
T Consensus 236 g~~evv~lL~~~ga~~~~~~----~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~ 311 (376)
T 2aja_A 236 GEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAP 311 (376)
T ss_dssp TTTTHHHHHHHHHHHHHHHH----TTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSS
T ss_pred CCHHHHHHHHhcCccccccc----HHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhc
Confidence 66666666666655554432 2444444444333221111100 2344555554
Q ss_pred cCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHhhCCcceeeeceeee
Q psy8763 565 LGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFHYSVSIFQVTY 635 (641)
Q Consensus 565 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~l~~~~ 635 (641)
.|++++ .+.|||++|++.|+.++|++|++.| .+.+..++|++.+|..+|+.++++.-++++
T Consensus 312 ~g~~~n----~~~~~L~~A~~~g~~e~v~lLl~~~------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (376)
T 2aja_A 312 TATIPG----DANELLRLALRLGNQGACALLLSIP------SVLALTKANNYYINETGGRLDLRAVALEHH 372 (376)
T ss_dssp CCSSTT----CCCHHHHHHHHHTCTTHHHHHTTSH------HHHHSCC-----------------------
T ss_pred cCCCCC----CccHHHHHHHHcCcHHHHHHHHcCh------HHHHHHHHhccccccccccccHHHHHHHHH
Confidence 344443 5668999999999999999999876 447789999999999999999998876653
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=1.1e-29 Score=230.39 Aligned_cols=185 Identities=17% Similarity=0.076 Sum_probs=110.9
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHH
Q psy8763 426 DLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLA 505 (641)
Q Consensus 426 ~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 505 (641)
.|.||||.|++.+..+.++.|++++.+ ++. +..+.||||.|+..|+.+++++|+++|++++.++..|+||||+|
T Consensus 4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~-----~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 4 TGQVSLPPGKRTNLRKTGSERIAHGMR-----VKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNA 77 (239)
T ss_dssp ---------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHH
T ss_pred cccccCchhhhhhhHHHHHHHhccCCC-----ccc-CchhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 356666666666666666666664332 332 24566777777777777777777777777777777777777777
Q ss_pred HhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCC-ChHHHH-
Q psy8763 506 ASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNE-SPLHLA- 583 (641)
Q Consensus 506 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~-t~L~~A- 583 (641)
+..|+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|++++.++..|. ||||+|
T Consensus 78 ~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~------------~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~ 145 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCN------------NVQVCKFLVESGAAVFAMTYSDMQTAADKCE 145 (239)
T ss_dssp HHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT------------CHHHHHHHHHTTCCTTCCCSSSCCCHHHHCC
T ss_pred HHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC------------CHHHHHHHHHcCCCcceecCCCCcchHHHHH
Confidence 7777777777777777777777777777777777777 77777777777777777776665 777777
Q ss_pred -HhcCCHHHHHHHHhcCCCccccccC---------CCCCChhHHHHHhhCCcceeeecee
Q psy8763 584 -ARYGRYNTVKKLLSSERGSFIINES---------DGEGLTPLHIASKEGFHYSVSIFQV 633 (641)
Q Consensus 584 -~~~~~~~~v~~Ll~~g~~~~~~~~~---------d~~g~t~l~~A~~~~~~~~~~~l~~ 633 (641)
+..|+.+++++|++.|++ ++.. +..+.+++++|...|. +++.|..
T Consensus 146 ~~~~g~~~~~~~Ll~~~a~---~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~ 200 (239)
T 1ycs_B 146 EMEEGYTQCSQFLYGVQEK---MGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHR 200 (239)
T ss_dssp SSSTTCCCHHHHHHHHHHH---TTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCC
T ss_pred HhhhccHHHHHHHHHhhhc---ccccccceEEEEeccCCCCCCcccccCCC--EEEEEEe
Confidence 666777777777777776 3333 5667777777777775 5555544
No 80
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=2.6e-30 Score=234.67 Aligned_cols=210 Identities=15% Similarity=0.170 Sum_probs=152.4
Q ss_pred hcCChHHHHHHhcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHHHH
Q psy8763 392 AEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHC 471 (641)
Q Consensus 392 ~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L~~ 471 (641)
..|.|||+.|++.+..+.++.|+++|++++.. ..+.||||.|+..|+.+++++|++.+. +++..+..|.||||+
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~-----~~~~~d~~g~t~L~~ 76 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVD-----DPSLPNDEGITALHN 76 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTS-----SCCCCCTTSCCHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCC-----CCCCcCCCCCCHHHH
Confidence 46899999999999999999999999999864 678999999999999999999998544 488999999999999
Q ss_pred HHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCC-chhHHH--hhcCCCchhh
Q psy8763 472 AAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRR-NILHLL--VLNGGGHIKE 548 (641)
Q Consensus 472 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~l~~a--~~~~~~~~~~ 548 (641)
|+..|+.+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|++++.++..|. ||||+| +..+
T Consensus 77 A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g------ 150 (239)
T 1ycs_B 77 AVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEG------ 150 (239)
T ss_dssp HHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTT------
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhc------
Confidence 9999999999999999999999999999999999999999999999999999999998887 999999 6667
Q ss_pred HHHHHHHHHHHHHHhhcCCccccc---------CCCCCChHHHHHhcCCHHHHHHHHhcCCC---ccccccCCCCCChhH
Q psy8763 549 FAEEVAAVFLGENLINLGACINLK---------NNSNESPLHLAARYGRYNTVKKLLSSERG---SFIINESDGEGLTPL 616 (641)
Q Consensus 549 ~~~~~~~~~~~~~Ll~~g~~~~~~---------~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~d~~g~t~l 616 (641)
+.+++++|+++|++++.. +..+.++++++++.|. +++.|.+.+.+ .-.....+..|.+|.
T Consensus 151 ------~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~--~i~vl~~~~~~~~~Ww~~~~~~~~G~~P~ 222 (239)
T 1ycs_B 151 ------YTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD--CMTIIHREDEDEIEWWWARLNDKEGYVPR 222 (239)
T ss_dssp ------CCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC--EEEECCCCTTSCSSEEEEEETTEEEEEEG
T ss_pred ------cHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC--EEEEEEecCCCCCCEEEEEECCcEEEeeh
Confidence 788999999999998876 5668999999988876 56666666654 111234567788888
Q ss_pred HHHHh
Q psy8763 617 HIASK 621 (641)
Q Consensus 617 ~~A~~ 621 (641)
.|...
T Consensus 223 ~yv~~ 227 (239)
T 1ycs_B 223 NLLGL 227 (239)
T ss_dssp GGEEC
T ss_pred HHeeE
Confidence 76443
No 81
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=2.1e-28 Score=210.47 Aligned_cols=165 Identities=15% Similarity=0.104 Sum_probs=139.8
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCccccccccCC-CCCCcHHHHHHhcCCh----hHHHHHHHcCCCCCcCCCCCCCHH
Q psy8763 428 STPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTD-AQKMTPLHCAAMFDRC----DVVQYLIDEGADLNVLDKEKRSPL 502 (641)
Q Consensus 428 ~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~-~~~~t~L~~A~~~~~~----~~v~~Ll~~g~~~~~~~~~g~t~L 502 (641)
.++|+.|++.|+.+.++.++..+. +..+ ..|+||||+|+..++. +++++|+++|+++|.++..|+|||
T Consensus 7 ~~~l~~Aa~~g~~~~~~~l~~~~~-------~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL 79 (186)
T 3t8k_A 7 YRTVSAAAMLGTYEDFLELFEKGY-------EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLF 79 (186)
T ss_dssp CSSHHHHHHHSCHHHHHHHHHHSS-------SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTH
T ss_pred ccHHHHHHHcCCHHHHHHHHhcCc-------ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence 467889999999999888887442 2333 5689999999999875 589999999999999999999999
Q ss_pred HHHHhcCC------HHHHHHHHHcCCCccccccCCC-chhHHHhhcCCCchhhHHHHHHHHHHHHHHhh-cCCcccccCC
Q psy8763 503 LLAASRGG------WKTVLTLVRNKANILLKDINRR-NILHLLVLNGGGHIKEFAEEVAAVFLGENLIN-LGACINLKNN 574 (641)
Q Consensus 503 ~~A~~~~~------~~~v~~Ll~~g~~~~~~~~~g~-t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~-~g~~~~~~~~ 574 (641)
|+|+..++ .+++++|+++|++++.+|..|. ||||+|+..+.... ...+++++|++ +|++++.+|.
T Consensus 80 h~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~-------~~~~iv~~Ll~~~gad~~~~d~ 152 (186)
T 3t8k_A 80 FPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDEN-------EMIPLYKLIFSQSGLQLLIKDK 152 (186)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHH-------HHHHHHHHHHTSTTCCTTCCCT
T ss_pred HHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChh-------hHHHHHHHHHHhcCCCCcccCC
Confidence 99998886 5789999999999999999999 99999998542211 15679999999 9999999999
Q ss_pred CCCChHHHHHhcCCHHHHHHHHhcCCCccccccCC
Q psy8763 575 SNESPLHLAARYGRYNTVKKLLSSERGSFIINESD 609 (641)
Q Consensus 575 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d 609 (641)
.|+||||+|++.|+.++|++|++.... .+.++
T Consensus 153 ~G~TpL~~A~~~~~~~~v~~L~~~~~~---~~~~~ 184 (186)
T 3t8k_A 153 WGLTALEFVKRCQKPIALKMMEDYIKK---YNLKE 184 (186)
T ss_dssp TSCCHHHHHHTTTCHHHHHHHHHHHHH---HTCCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHHHHH---Hhccc
Confidence 999999999999999999999988655 44444
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=5.3e-28 Score=198.15 Aligned_cols=132 Identities=20% Similarity=0.189 Sum_probs=119.9
Q ss_pred ccccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccC-CCchh
Q psy8763 457 CLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDIN-RRNIL 535 (641)
Q Consensus 457 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~l 535 (641)
+++..+..|.||||+|+..++.+++++|+++|++++.++..|+||||+|+. ++.+++++|+++|++++.+|.. |.|||
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPV 82 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHH
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHH
Confidence 467888889999999999999999999999999999999999999999999 9999999999999999999988 89999
Q ss_pred HHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCC
Q psy8763 536 HLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERG 601 (641)
Q Consensus 536 ~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 601 (641)
|+|+..+ +.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++
T Consensus 83 ~~A~~~~------------~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 83 HDAAREG------------FLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHT------------CHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHcC------------CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999998 88999999999999999999999999999999999999999998875
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=3.4e-28 Score=204.65 Aligned_cols=145 Identities=19% Similarity=0.181 Sum_probs=120.1
Q ss_pred ccCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCc-hhHH
Q psy8763 459 NSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRN-ILHL 537 (641)
Q Consensus 459 ~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t-~l~~ 537 (641)
+..+..|.||||+|+..|+.+++++|+++|++++..+..|+||||+|+ .++.+++++|+++|++++.+|..|.| |||+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 456778999999999999999999999999999999999999999985 89999999999999999999999999 9999
Q ss_pred HhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHH
Q psy8763 538 LVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLH 617 (641)
Q Consensus 538 a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~ 617 (641)
|+..+ +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.||.+
T Consensus 85 A~~~~------------~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~~~ 149 (156)
T 1bi7_B 85 AAREG------------FLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG---TRGSNHARIDAAE 149 (156)
T ss_dssp HHHHT------------CHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC------------------
T ss_pred HHHCC------------CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC---CCccCcCcCcccc
Confidence 99999 99999999999999999999999999999999999999999999999 8999999999987
Q ss_pred HH
Q psy8763 618 IA 619 (641)
Q Consensus 618 ~A 619 (641)
-+
T Consensus 150 ~~ 151 (156)
T 1bi7_B 150 GP 151 (156)
T ss_dssp --
T ss_pred cC
Confidence 44
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=1.1e-27 Score=196.26 Aligned_cols=134 Identities=22% Similarity=0.256 Sum_probs=106.8
Q ss_pred CcccccccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhc
Q psy8763 22 GVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDF 101 (641)
Q Consensus 22 ~~~~~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~ 101 (641)
+++++.+|..|+||||+|++.|+.+++++|+++|+ +++..+..|.||||+|+. |+.+++++|+++
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~------------ 66 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGA--DPNALNRFGRRPIQVMMM-GSAQVAELLLLH------------ 66 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTC--CTTCCCTTCCTTTTTSTT-SCHHHHHHHHHH------------
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCC--CcCCcCCCCCCHHHHHHc-CCHHHHHHHHHC------------
Confidence 45777888888888888888888888888888876 556677788888888888 888888888887
Q ss_pred CCCcccCCCC-CCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCC
Q psy8763 102 GASLKRACSN-GYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAK 178 (641)
Q Consensus 102 g~~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~ 178 (641)
|++++..+.. |.||||+|+..|+.+++++|+++|+++ +..+..|.|||++|+..|+.+++++|+++|+|
T Consensus 67 g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~--------~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 67 GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL--------DVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp TCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCC--------CCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--------CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 7788888777 788888888888888888888888776 45577778888888888888888888887764
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=2.6e-28 Score=209.97 Aligned_cols=159 Identities=18% Similarity=0.143 Sum_probs=141.9
Q ss_pred CCcHHHHHHhcCChhHHHHHHHcCCCCCcCC-CCCCCHHHHHHhcCCH----HHHHHHHHcCCCccccccCCCchhHHHh
Q psy8763 465 KMTPLHCAAMFDRCDVVQYLIDEGADLNVLD-KEKRSPLLLAASRGGW----KTVLTLVRNKANILLKDINRRNILHLLV 539 (641)
Q Consensus 465 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~L~~A~~~~~~----~~v~~Ll~~g~~~~~~~~~g~t~l~~a~ 539 (641)
++++|+.|++.|+.+.++.+++.+. +..+ ..|+||||+|+..++. +++++|+++|+++|.+|..|+||||+|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~ 83 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLF 83 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHH
T ss_pred cccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 4689999999999999999998874 4455 7799999999999975 5999999999999999999999999999
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCC-ChHHHHHhcC-----CHHHHHHHHh-cCCCccccccCCCCC
Q psy8763 540 LNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNE-SPLHLAARYG-----RYNTVKKLLS-SERGSFIINESDGEG 612 (641)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~-t~L~~A~~~~-----~~~~v~~Ll~-~g~~~~~~~~~d~~g 612 (641)
..+...+.. ..+++++|+++|+++|.+|..|. ||||+|+..+ +.+++++|++ +|++ ++.+|..|
T Consensus 84 ~~~~~~~~~------~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad---~~~~d~~G 154 (186)
T 3t8k_A 84 QGGGNDITG------TTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ---LLIKDKWG 154 (186)
T ss_dssp HHCTTCHHH------HHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC---TTCCCTTS
T ss_pred HcCCcchhh------HHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC---CcccCCCC
Confidence 998543321 47899999999999999999999 9999999954 4569999999 9999 99999999
Q ss_pred ChhHHHHHhhCCcceeeeceee
Q psy8763 613 LTPLHIASKEGFHYSVSIFQVT 634 (641)
Q Consensus 613 ~t~l~~A~~~~~~~~~~~l~~~ 634 (641)
+||||+|+..|+.+++++|+..
T Consensus 155 ~TpL~~A~~~~~~~~v~~L~~~ 176 (186)
T 3t8k_A 155 LTALEFVKRCQKPIALKMMEDY 176 (186)
T ss_dssp CCHHHHHHTTTCHHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999999999999765
No 86
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.94 E-value=4.2e-27 Score=197.96 Aligned_cols=146 Identities=18% Similarity=0.166 Sum_probs=108.6
Q ss_pred cccccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCC
Q psy8763 25 TRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGAS 104 (641)
Q Consensus 25 ~~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~ 104 (641)
.+..+..|.||||+|++.|+.+++++|+++|+ +++..+..|.||||+|+ .|+.+++++|+++ |++
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~------------g~~ 69 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGRVEEVRALLEAGA--NPNAPNSYGRRPIQVMM-MGSARVAELLLLH------------GAE 69 (156)
T ss_dssp -----CCSTTHHHHHHHHTCHHHHHHHHTTTC--CTTCCCSSSCCTTTSSC-TTCHHHHHHHHTT------------TCC
T ss_pred ccCCCccchHHHHHHHHcCCHHHHHHHHHcCC--CCCCCCCCCCCHHHHHH-cCCHHHHHHHHHc------------CCC
Confidence 34567788999999999999999999999887 56677888999999885 8899999999988 888
Q ss_pred cccCCCCCCc-HHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCC
Q psy8763 105 LKRACSNGYY-PIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQ 183 (641)
Q Consensus 105 ~~~~~~~g~t-~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 183 (641)
++..+..|.| |||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..|+.+++++|+++|++++.++
T Consensus 70 ~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~--------~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~ 141 (156)
T 1bi7_B 70 PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL--------DVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSN 141 (156)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS--------SCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-------
T ss_pred CCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCC--------cccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccC
Confidence 8888888988 999999999999999999998887 4567888899999999999999999999999988888
Q ss_pred CCCCcHHHHH
Q psy8763 184 FDLSTPVHLA 193 (641)
Q Consensus 184 ~~~~t~l~~A 193 (641)
..|.||.+.+
T Consensus 142 ~~g~t~~~~~ 151 (156)
T 1bi7_B 142 HARIDAAEGP 151 (156)
T ss_dssp ----------
T ss_pred cCcCcccccC
Confidence 8888877643
No 87
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=1e-25 Score=182.72 Aligned_cols=126 Identities=40% Similarity=0.529 Sum_probs=120.7
Q ss_pred CCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCC
Q psy8763 464 QKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGG 543 (641)
Q Consensus 464 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 543 (641)
+|.||||.|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~- 79 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG- 79 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcC-
Confidence 4889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCC
Q psy8763 544 GHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERG 601 (641)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 601 (641)
+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|+++|++
T Consensus 80 -----------~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 80 -----------HLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp -----------CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred -----------hHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 89999999999999999999999999999999999999999999985
No 88
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=4.2e-26 Score=186.82 Aligned_cols=127 Identities=25% Similarity=0.296 Sum_probs=118.5
Q ss_pred CCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhh
Q psy8763 461 TDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVL 540 (641)
Q Consensus 461 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~ 540 (641)
....+.||||+|+..|+.+++++|+++|++++..+..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+.
T Consensus 10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~ 89 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAF 89 (136)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH
T ss_pred ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHH
Confidence 45567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcC
Q psy8763 541 NGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSE 599 (641)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g 599 (641)
.+ +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 90 ~~------------~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 90 IG------------HLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HT------------CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cC------------CHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99 899999999999999999999999999999999999999999876
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1.3e-26 Score=190.30 Aligned_cols=133 Identities=26% Similarity=0.281 Sum_probs=88.4
Q ss_pred CCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCC
Q psy8763 488 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGA 567 (641)
Q Consensus 488 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~ 567 (641)
|+|+ .++..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|+
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~------------~~~~~~~Ll~~g~ 67 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHG------------HLKVVELLLQHKA 67 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT------------CHHHHHHHHHTTC
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC------------CHHHHHHHHHcCC
Confidence 4555 45666777777777777777777777777777666666777777777666 6667777777777
Q ss_pred cccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHhhCCcceeeeceeeee
Q psy8763 568 CINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFHYSVSIFQVTYV 636 (641)
Q Consensus 568 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~l~~~~~ 636 (641)
+++.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.|||++|+..++.+++++|.+..+
T Consensus 68 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 68 LVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGAS---RNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp CTTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred cccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 7777777777777777777777777777777776 66677777777777777777777766665543
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=3.3e-25 Score=181.45 Aligned_cols=128 Identities=22% Similarity=0.236 Sum_probs=117.3
Q ss_pred cccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcc
Q psy8763 27 ILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLK 106 (641)
Q Consensus 27 ~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~ 106 (641)
.....+.||||+|++.|+.+++++|+++|+ +++..+..|.||||+|+..|+.+++++|+++ |++++
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------------g~~~~ 74 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMANGA--DVNAKDEYGLTPLYLATAHGHLEIVEVLLKN------------GADVN 74 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT------------TCCTT
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHcCC--CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc------------CCCCC
Confidence 345678999999999999999999999997 6677889999999999999999999999999 99999
Q ss_pred cCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcC
Q psy8763 107 RACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSG 176 (641)
Q Consensus 107 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g 176 (641)
..+..|.||||+|+..|+.+++++|+++|+++ +..+..|.|||++|+..|+.+++++|+++|
T Consensus 75 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~--------~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 75 AVDAIGFTPLHLAAFIGHLEIAEVLLKHGADV--------NAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT--------TCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--------cCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999999999987 566889999999999999999999999876
No 91
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.92 E-value=1.4e-25 Score=194.16 Aligned_cols=166 Identities=19% Similarity=0.237 Sum_probs=133.1
Q ss_pred CccccccCCCceeeeccCCCccc----------ccccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHH
Q psy8763 3 LLSVQSDNKNKSRLIPSSSGVNT----------RILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALH 72 (641)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~ 72 (641)
++|...++.+.++++++...-.. ...+..|+||||+|++.|+.+++++|++ |+ +++..+..|.||||
T Consensus 5 ~~aa~~~~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--~~~~~d~~g~t~L~ 81 (183)
T 3deo_A 5 IIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLLE-DR--DVDAVDENGRTALL 81 (183)
T ss_dssp EEEEEEETTTEEEEEEEETTCCCCEEEEGGGSCHHHHHHHHHHHHHHHHTTCHHHHHHHTT-TS--CTTCCCTTSCCHHH
T ss_pred HHHHHhcCCchhHHHHHHhCCCCccccchhcccccCCCCCCCHHHHHHHcCCHHHHHHHHh-cC--CCCCcCCCCCCHHH
Confidence 56778888889998885322221 2236788899999999999999999999 76 66778888999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCC-CCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccC
Q psy8763 73 IAAIYDFDECARILVSEQPECDWIMVKDFGASLKRAC-SNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDA 151 (641)
Q Consensus 73 ~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 151 (641)
+|+..|+.+++++|+++ |++++..+ ..|+||||+|+..|+.+++++|+++|+++ +..|.
T Consensus 82 ~A~~~~~~~~v~~Ll~~------------ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~--------~~~d~ 141 (183)
T 3deo_A 82 FVAGLGSDKCVRLLAEA------------GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI--------EVEDE 141 (183)
T ss_dssp HHHHHTCHHHHHHHHHT------------TCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCT--------TCCCT
T ss_pred HHHHcCCHHHHHHHHHc------------CCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCC--------cCCCC
Confidence 99999999999999998 88888887 78889999999999999999999888886 45688
Q ss_pred CCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhc
Q psy8763 152 EGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNL 208 (641)
Q Consensus 152 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ 208 (641)
.|.||||+|+..++. ..+.++|++|+..|+.+++++|.++
T Consensus 142 ~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 142 RGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp TSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence 888888888764322 2346888888888888888888754
No 92
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=7.5e-25 Score=177.51 Aligned_cols=126 Identities=31% Similarity=0.499 Sum_probs=88.3
Q ss_pred CCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCC
Q psy8763 31 KKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACS 110 (641)
Q Consensus 31 ~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~ 110 (641)
+|+||||+|++.|+.+++++|+++|+ +++..+..|.||||.|+..|+.+++++|+++ |++++..+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~--~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~------------g~~~~~~~~ 66 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA--DVNAKDKNGRTPLHLAARNGHLEVVKLLLEA------------GADVNAKDK 66 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTC--CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT------------TCCTTCCCT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCC--CCCCcCCCCCcHHHHHHHcCcHHHHHHHHHc------------CCCCcccCC
Confidence 36777777777777777777777765 4455666777777777777777777777776 666676777
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCC
Q psy8763 111 NGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAK 178 (641)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~ 178 (641)
.|.||||+|+..|+.+++++|+++|+++ +..+..|.|||++|+..|+.+++++|+++|+|
T Consensus 67 ~g~t~l~~A~~~~~~~~~~~Ll~~g~~~--------~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 67 NGRTPLHLAARNGHLEVVKLLLEAGADV--------NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCT--------TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred CCCcHHHHHHHcChHHHHHHHHHcCCCC--------cccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 7777777777777777777777776665 34466667777777777777777777777664
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=1.8e-25 Score=183.56 Aligned_cols=130 Identities=26% Similarity=0.249 Sum_probs=116.6
Q ss_pred cCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHh
Q psy8763 460 STDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLV 539 (641)
Q Consensus 460 ~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~ 539 (641)
.++..|.||||+|+..++.+++++|+++|++++..+..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCC
Q psy8763 540 LNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERG 601 (641)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 601 (641)
..+ +.+++++|+++|++++.+|..|.|||++|+..+..+++++|.+.++.
T Consensus 85 ~~~------------~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 85 KNG------------HVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp HTT------------CHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred HcC------------CHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 999 89999999999999999999999999999999999999888877654
No 94
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=8.9e-25 Score=198.38 Aligned_cols=170 Identities=16% Similarity=0.058 Sum_probs=91.8
Q ss_pred CCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCC
Q psy8763 31 KKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACS 110 (641)
Q Consensus 31 ~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~ 110 (641)
.+.+++.+++..|+.+.+..+...+.. + +..|.||||.|+..|+.+++++|++ |++++..+.
T Consensus 14 ~~~~~~l~~~~~g~~~~~~~~~~~~~~--~---~~~g~t~L~~A~~~g~~~~v~~Ll~-------------~~~~~~~d~ 75 (244)
T 3ui2_A 14 EGAMEYLIEWKDGHSPSWVPSSYIAAD--V---VSEYETPWWTAARKADEQALSQLLE-------------DRDVDAVDE 75 (244)
T ss_dssp TTEEEEEEEESSCCCCEEEEGGGSCHH--H---HHHHHHHHHHHHTTTCHHHHHHTTT-------------TCCTTCBCT
T ss_pred CCccHHHHHHHcCCCcccccccccccc--c---ccCCCCHHHHHHHcCCHHHHHHHHc-------------CCCCCCcCC
Confidence 344444445555554444443333321 1 1345555555555555555555554 344555555
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhcccc-CCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcH
Q psy8763 111 NGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFD-AEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTP 189 (641)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~ 189 (641)
.|.||||+|+..|+.+++++|+++|++++ ..+ ..|.||||+|+..|+.++|++|+++|++++.++..|.||
T Consensus 76 ~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~--------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~ 147 (244)
T 3ui2_A 76 NGRTALLFVAGLGSDKCVRLLAEAGADLD--------HRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTA 147 (244)
T ss_dssp TSCBHHHHHHHHTCHHHHHHHHHTTCCTT--------CCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred CCCCHHHHHHHCCCHHHHHHHHHcCCCCC--------cCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcH
Confidence 55555555555555555555555555542 223 445666666666666666666666666666666666666
Q ss_pred HHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHcCC
Q psy8763 190 VHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGA 248 (641)
Q Consensus 190 l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~ 248 (641)
||+|+..++. . .+.|||++|+..|+.+++++|++++.
T Consensus 148 l~~A~~~~~~---------~-------------~~~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 148 LELAREILKT---------T-------------PKGNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp HHHHHHHHTT---------C-------------CCSSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred HHHHHHHHhc---------c-------------CCCCHHHHHHHcChHHHHHHHHHhcc
Confidence 6666543221 1 23566666666666666666666543
No 95
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=9.4e-25 Score=203.77 Aligned_cols=140 Identities=18% Similarity=0.108 Sum_probs=124.8
Q ss_pred CCcHHHHHHhcCChhHHHHHHHcCCCCCc------CCCCCCCHHHHHHhc---CCHHHHHHHHHcCCCccccccCCCchh
Q psy8763 465 KMTPLHCAAMFDRCDVVQYLIDEGADLNV------LDKEKRSPLLLAASR---GGWKTVLTLVRNKANILLKDINRRNIL 535 (641)
Q Consensus 465 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~------~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~l 535 (641)
..++|+.|+..++.+.++.|++.|++++. .+..|+||||+|+.. ++.+++++|+++|++++.+|..|.|||
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpL 230 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTAL 230 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHH
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence 44679999999999999999999999998 688999999999987 899999999999999999999999999
Q ss_pred HHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChh
Q psy8763 536 HLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTP 615 (641)
Q Consensus 536 ~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~ 615 (641)
|+|+..+ +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++ .|.||
T Consensus 231 h~A~~~g------------~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~---------~g~tp 289 (301)
T 2b0o_E 231 HYAALYN------------QPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG---------TFAFP 289 (301)
T ss_dssp HHHHHTT------------CHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH---------TTSSC
T ss_pred HHHHHcC------------CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC---------CCCCh
Confidence 9999999 99999999999999999999999999999999999999999999976 57899
Q ss_pred HHHHHhhCCc
Q psy8763 616 LHIASKEGFH 625 (641)
Q Consensus 616 l~~A~~~~~~ 625 (641)
||+|++.|+.
T Consensus 290 Lh~A~~~g~~ 299 (301)
T 2b0o_E 290 LHVDYSWVIS 299 (301)
T ss_dssp CC--------
T ss_pred hHHHHhcCCc
Confidence 9999999874
No 96
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.91 E-value=3.6e-25 Score=200.98 Aligned_cols=143 Identities=22% Similarity=0.266 Sum_probs=129.5
Q ss_pred ccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCccc
Q psy8763 28 LNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKR 107 (641)
Q Consensus 28 ~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~ 107 (641)
.+..|.||||+|++.|+.+++++|++ |+ +++..+..|.||||+|+..|+.++|++|+++ |++++.
T Consensus 41 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~--~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~------------ga~~~~ 105 (244)
T 3ui2_A 41 VVSEYETPWWTAARKADEQALSQLLE-DR--DVDAVDENGRTALLFVAGLGSDKCVRLLAEA------------GADLDH 105 (244)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHTTT-TC--CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT------------TCCTTC
T ss_pred cccCCCCHHHHHHHcCCHHHHHHHHc-CC--CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc------------CCCCCc
Confidence 45689999999999999999999999 76 6778899999999999999999999999999 999999
Q ss_pred CC-CCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCC
Q psy8763 108 AC-SNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDL 186 (641)
Q Consensus 108 ~~-~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~ 186 (641)
.+ ..|.||||+|+..|+.+++++|+++|+++ +..+..|.||||+|+..++ ...+
T Consensus 106 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~--------~~~d~~g~t~l~~A~~~~~-----------------~~~~ 160 (244)
T 3ui2_A 106 RDMRGGLTALHMAAGYVRPEVVEALVELGADI--------EVEDERGLTALELAREILK-----------------TTPK 160 (244)
T ss_dssp CCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT--------TCCCTTCCCHHHHHHHHHT-----------------TCCC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC--------CCCCCCCCcHHHHHHHHHh-----------------ccCC
Confidence 88 88999999999999999999999999997 5678999999999986322 1456
Q ss_pred CcHHHHHHHcCcHHHHHHHHhcCC
Q psy8763 187 STPVHLACSQGALDIVRLMFNLQP 210 (641)
Q Consensus 187 ~t~l~~A~~~g~~~iv~~Ll~~~~ 210 (641)
.|||++|+..|+.+++++|+++..
T Consensus 161 ~~~l~~a~~~g~~~iv~~L~~~~~ 184 (244)
T 3ui2_A 161 GNPMQFGRRIGLEKVINVLEGQVF 184 (244)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHE
T ss_pred CCHHHHHHHcChHHHHHHHHHhcc
Confidence 899999999999999999998643
No 97
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=7.1e-25 Score=189.77 Aligned_cols=137 Identities=22% Similarity=0.266 Sum_probs=82.5
Q ss_pred CCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccc-cCCCchhHHHhhcC
Q psy8763 464 QKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKD-INRRNILHLLVLNG 542 (641)
Q Consensus 464 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~g~t~l~~a~~~~ 542 (641)
.|.||||+|+..|+.+++++|++ |++++..+..|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..+
T Consensus 43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~ 121 (183)
T 3deo_A 43 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 121 (183)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcC
Confidence 45566666666666666666666 66666666666666666666666666666666666666555 55666666666666
Q ss_pred CCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHhh
Q psy8763 543 GGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKE 622 (641)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~~ 622 (641)
+.+++++|+++|++++.+|..|.||||+|++.++. ..+.+||++|+..
T Consensus 122 ------------~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~--------------------~~~~~~l~~a~~~ 169 (183)
T 3deo_A 122 ------------RPEVVEALVELGADIEVEDERGLTALELAREILKT--------------------TPKGNPMQFGRRI 169 (183)
T ss_dssp ------------CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT--------------------CCCCSHHHHHHHH
T ss_pred ------------cHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC--------------------cccccHHHHHHHc
Confidence 56666666666666666666666666666543211 1334566666666
Q ss_pred CCcceeeecee
Q psy8763 623 GFHYSVSIFQV 633 (641)
Q Consensus 623 ~~~~~~~~l~~ 633 (641)
|+.+++++|.+
T Consensus 170 ~~~~i~~~L~~ 180 (183)
T 3deo_A 170 GLEKVINVLEG 180 (183)
T ss_dssp HHHHHHHHHHT
T ss_pred CHHHHHHHHHH
Confidence 66666666544
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=2.6e-24 Score=172.69 Aligned_cols=108 Identities=22% Similarity=0.160 Sum_probs=57.1
Q ss_pred CCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCC
Q psy8763 464 QKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGG 543 (641)
Q Consensus 464 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~ 543 (641)
.|.||||+|+..++.+++++|+++|++++..+..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..+
T Consensus 6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~- 84 (123)
T 3aaa_C 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEG- 84 (123)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHT-
T ss_pred ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC-
Confidence 3445555555555555555555555555555555555555555555555555555555555555555555555555554
Q ss_pred CchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHH
Q psy8763 544 GHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLA 583 (641)
Q Consensus 544 ~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 583 (641)
+.+++++|+++|++++.+|..|.||||+|
T Consensus 85 -----------~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 85 -----------HVSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp -----------CHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred -----------CHHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 44555555555555555555555555555
No 99
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.90 E-value=4.4e-24 Score=171.40 Aligned_cols=118 Identities=22% Similarity=0.196 Sum_probs=102.1
Q ss_pred CCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCC
Q psy8763 495 DKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNN 574 (641)
Q Consensus 495 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~ 574 (641)
+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|++++.+|.
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~------------~~~~v~~Ll~~g~~~~~~d~ 71 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCG------------QLEILEFLLLKGADINAPDK 71 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTT------------CHHHHHHHHTTTCCTTCCCT
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcC------------CHHHHHHHHHcCCCCCcCCC
Confidence 456788999999999999999999999999999999999999999988 88899999999999999999
Q ss_pred CCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHHHHhhCCcce
Q psy8763 575 SNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFHYS 627 (641)
Q Consensus 575 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~A~~~~~~~~ 627 (641)
.|+||||+|+..|+.+++++|+++|++ ++..|..|.|||++|...+..++
T Consensus 72 ~g~tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 72 HHITPLLSAVYEGHVSCVKLLLSKGAD---KTVKGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHCCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHhCCHHHHHH
Confidence 999999999999999999999999988 88889999999999866554443
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=2e-24 Score=193.89 Aligned_cols=129 Identities=20% Similarity=0.182 Sum_probs=116.3
Q ss_pred CCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHc-CCCccccccCCCchhHHHh
Q psy8763 461 TDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRN-KANILLKDINRRNILHLLV 539 (641)
Q Consensus 461 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~a~ 539 (641)
.+..|.||||+|+..|+.+++++|+++|++++.++..|+||||+|+..|+.+++++|+++ |++++.+|..|.||||+|+
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~ 148 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA 148 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred cccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence 455688999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCC
Q psy8763 540 LNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERG 601 (641)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 601 (641)
..+ +.+++++|+++|++++.+|..|.|||++|+..++.++++.|++.|+.
T Consensus 149 ~~~------------~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~ 198 (222)
T 3ehr_A 149 WKG------------YADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAV 198 (222)
T ss_dssp HHT------------CHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC--------
T ss_pred HcC------------CHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchh
Confidence 999 99999999999999999999999999999999999999999999998
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=2.8e-23 Score=191.52 Aligned_cols=192 Identities=19% Similarity=0.104 Sum_probs=145.3
Q ss_pred hhcCChHHHHHHhcCCHHHHHHHHHCCCCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHhcCCCccccccccCCCCCCcHH
Q psy8763 391 AAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFD-LSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPL 469 (641)
Q Consensus 391 ~~~~~t~l~~a~~~~~~~~~~~Ll~~g~~~~~~~~~-~~t~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~~~~t~L 469 (641)
|..+.+.++.+...|+..+.+++...-.+....... .....+ ....-..+++....... .+.......++|
T Consensus 63 d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~----~~~fI~aKYl~~~f~~~----~~~~~~~~l~~l 134 (278)
T 1dcq_A 63 DVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIA----RKDYITAKYMERRYARK----KHADTAAKLHSL 134 (278)
T ss_dssp SCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHH----HHHHHHHHHTTCTTSCC----CSSSHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHH----HHHHHHHHHHHhhcccc----cccccchhhhhh
Confidence 456777889888888877766654332221111111 111111 11111222333211110 111122234689
Q ss_pred HHHHhcCChhHHHHHHHcCCCCC------cCCCCCCCHHHHHHhc---CCHHHHHHHHHcCCCccccccCCCchhHHHhh
Q psy8763 470 HCAAMFDRCDVVQYLIDEGADLN------VLDKEKRSPLLLAASR---GGWKTVLTLVRNKANILLKDINRRNILHLLVL 540 (641)
Q Consensus 470 ~~A~~~~~~~~v~~Ll~~g~~~~------~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~ 540 (641)
+.|+..++.+.++.+++.|++++ ..+..|+||||+|+.. ++.+++++|+++|++++.+|..|.||||+|+.
T Consensus 135 ~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~ 214 (278)
T 1dcq_A 135 CEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCL 214 (278)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHH
T ss_pred hhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHH
Confidence 99999999999999999999954 4478899999999998 89999999999999999999999999999999
Q ss_pred cCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCc
Q psy8763 541 NGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGS 602 (641)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~ 602 (641)
.+ +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++.
T Consensus 215 ~g------------~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 215 TD------------NAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp TT------------CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred cC------------CHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99 999999999999999999999999999999999999999999999873
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.89 E-value=2e-23 Score=187.33 Aligned_cols=135 Identities=17% Similarity=0.140 Sum_probs=75.3
Q ss_pred ccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCccc
Q psy8763 28 LNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKR 107 (641)
Q Consensus 28 ~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~ 107 (641)
.+..|.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+..|+.++|++|+++. |++++.
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-----------g~~~~~ 135 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDNRV--GVNGLDKAGSTALYWACHGGHKDIVEMLFTQP-----------NIELNQ 135 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHTTST-----------TCCCCC
T ss_pred cccccccccccccccCcHHHHHHHHhCCC--CccccCCCCCCHHHHHHHcCCHHHHHHHHcCC-----------CCCccc
Confidence 44555666666666666666666666664 44455566666666666666666666666542 555666
Q ss_pred CCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCC
Q psy8763 108 ACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQ 183 (641)
Q Consensus 108 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 183 (641)
.+..|.||||+|+..|+.+++++|+++|+++ +..+..|.|||++|+..|..++++.|++.|+.....+
T Consensus 136 ~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~--------~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 136 QNKLGDTALHAAAWKGYADIVQLLLAKGART--------DLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHHTCCS--------CCCCTTSCCHHHHCCSHHHHHHHC-------------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC--------ccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccc
Confidence 6666666666666666666666666666655 3445566666666666666666666666665554443
No 103
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=1.1e-22 Score=189.86 Aligned_cols=140 Identities=21% Similarity=0.128 Sum_probs=122.7
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCccc------CCCCCCcHHHHHHHh---CCHHHHHHHHHhccc
Q psy8763 67 GRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKR------ACSNGYYPIHDAAKN---ASSKTMEVFLQFGES 137 (641)
Q Consensus 67 g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~------~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~ 137 (641)
..++|+.|+..|+.+.++.|++. |++++. .+..|.||||+|+.. |+.+++++|+++|++
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~------------g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad 218 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFAN------------GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH 218 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHT------------TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC
T ss_pred hHHHHhhhhhccCHHHHHHHHhc------------CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC
Confidence 45779999999999999999998 888877 688999999999997 899999999999999
Q ss_pred CCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCcccccc
Q psy8763 138 IGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCL 217 (641)
Q Consensus 138 ~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~ 217 (641)
+ +..|..|.||||+|+..|+.++|++|+++|++++.+|..|.|||++|+..|+.+++++|++++++
T Consensus 219 v--------n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------ 284 (301)
T 2b0o_E 219 L--------DAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------ 284 (301)
T ss_dssp T--------TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------
T ss_pred C--------CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------
Confidence 7 56788999999999999999999999999999999999999999999999999999999998764
Q ss_pred ccCCCCCCcHHHHHHhcCcH
Q psy8763 218 NSTDAQKMTPLHCAAMFDRC 237 (641)
Q Consensus 218 ~~~~~~~~t~L~~A~~~~~~ 237 (641)
.|.||||+|+.+|+.
T Consensus 285 -----~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 285 -----TFAFPLHVDYSWVIS 299 (301)
T ss_dssp -----TTSSCCC--------
T ss_pred -----CCCChhHHHHhcCCc
Confidence 478999999998864
No 104
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.88 E-value=6.3e-23 Score=195.21 Aligned_cols=151 Identities=19% Similarity=0.192 Sum_probs=120.5
Q ss_pred CCCCCcHHHHHHhc-CChhHHHHHHHcCCCCCcCC--CCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHH
Q psy8763 462 DAQKMTPLHCAAMF-DRCDVVQYLIDEGADLNVLD--KEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLL 538 (641)
Q Consensus 462 ~~~~~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a 538 (641)
...+.|+||.|+.. ++.+++++|+++|++++..+ ..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A 275 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHA 275 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 34566899999999 99999999999999999988 8999999999999999999999999999999999999999999
Q ss_pred hhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChhHHH
Q psy8763 539 VLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHI 618 (641)
Q Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~l~~ 618 (641)
+..+ +.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.+.........+..+.|++++
T Consensus 276 ~~~g------------~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i 343 (368)
T 3jue_A 276 TILG------------HTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDI 343 (368)
T ss_dssp HHHT------------CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC------------------
T ss_pred HHcC------------cHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHH
Confidence 9999 9999999999999999999999999999999999999999999886544355667788899988
Q ss_pred HHhhCC
Q psy8763 619 ASKEGF 624 (641)
Q Consensus 619 A~~~~~ 624 (641)
+.....
T Consensus 344 ~~~~~~ 349 (368)
T 3jue_A 344 FRDFSL 349 (368)
T ss_dssp ------
T ss_pred HHHHHh
Confidence 776643
No 105
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=6.7e-22 Score=199.20 Aligned_cols=123 Identities=18% Similarity=0.124 Sum_probs=104.0
Q ss_pred cHHHHHHhcCChhHHHHHHHcCCCCCcC------CCCCCCHHHHHHh---cCCHHHHHHHHHcCCCccccccCCCchhHH
Q psy8763 467 TPLHCAAMFDRCDVVQYLIDEGADLNVL------DKEKRSPLLLAAS---RGGWKTVLTLVRNKANILLKDINRRNILHL 537 (641)
Q Consensus 467 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~------~~~g~t~L~~A~~---~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~ 537 (641)
+.||.|+..|+.+.++.|+++|+++|.. +..|+||||+|+. .|+.+++++|+++|+++|.+|..|.||||+
T Consensus 134 ~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~ 213 (497)
T 3lvq_E 134 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY 213 (497)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHH
T ss_pred HHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHH
Confidence 6688888888888888888888888876 7788888888865 788888888888888888888888888888
Q ss_pred HhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCChHHHHHhcCCHHHHHHHHhcCCC
Q psy8763 538 LVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERG 601 (641)
Q Consensus 538 a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~ 601 (641)
|+..+ +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 214 A~~~g------------~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~ 265 (497)
T 3lvq_E 214 AALYN------------QPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 265 (497)
T ss_dssp HTTTT------------CHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC-
T ss_pred HHHcC------------CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC
Confidence 88888 88888888888888888888888888888888888888888888887
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=9.2e-22 Score=148.62 Aligned_cols=92 Identities=39% Similarity=0.499 Sum_probs=70.8
Q ss_pred CCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCC
Q psy8763 498 KRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNE 577 (641)
Q Consensus 498 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~ 577 (641)
|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|++++.+|..|.
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~------------~~~~v~~Ll~~ga~~~~~d~~g~ 69 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG------------HLEVVKLLLEAGADVNAKDKNGR 69 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT------------CHHHHHHHHHTTCCTTCCCTTSC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcC------------CHHHHHHHHHcCCCCCccCCCCC
Confidence 677777777777777777777777777777777777777777777 77777777777777777777888
Q ss_pred ChHHHHHhcCCHHHHHHHHhcCCC
Q psy8763 578 SPLHLAARYGRYNTVKKLLSSERG 601 (641)
Q Consensus 578 t~L~~A~~~~~~~~v~~Ll~~g~~ 601 (641)
||||+|+..|+.+++++|+++|++
T Consensus 70 t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 70 TPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC
Confidence 888888888888888888877764
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=1.9e-21 Score=146.88 Aligned_cols=93 Identities=29% Similarity=0.453 Sum_probs=87.4
Q ss_pred CCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCC
Q psy8763 31 KKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACS 110 (641)
Q Consensus 31 ~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~ 110 (641)
+|+||||+|+..|+.+++++|+++|+ +++.++..|.||||+|+..|+.+++++|+++ |++++.++.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~--~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~------------ga~~~~~d~ 66 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGA--DVNAKDKNGRTPLHLAARNGHLEVVKLLLEA------------GADVNAKDK 66 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT------------TCCTTCCCT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCC--CCcccCCCCCCHHHHHHHcCCHHHHHHHHHc------------CCCCCccCC
Confidence 48999999999999999999999997 6778899999999999999999999999999 999999999
Q ss_pred CCCcHHHHHHHhCCHHHHHHHHHhccc
Q psy8763 111 NGYYPIHDAAKNASSKTMEVFLQFGES 137 (641)
Q Consensus 111 ~g~t~L~~A~~~g~~~~v~~Ll~~~~~ 137 (641)
.|.||||+|+..|+.+++++|+++|++
T Consensus 67 ~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 67 NGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999874
No 108
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.85 E-value=1.1e-20 Score=174.10 Aligned_cols=132 Identities=15% Similarity=0.162 Sum_probs=120.1
Q ss_pred CCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhC---CCHHHHHHHHHcCCCCCcCCCCCCc
Q psy8763 112 GYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHG---GDFKAVELCLKSGAKISTQQFDLST 188 (641)
Q Consensus 112 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~~t 188 (641)
..++|+.|+..|+.+.++.+++.|++++.. ..++..+..|.||||+|+.. |+.++|++|+++|++++.++..|.|
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~--~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~T 207 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEK--IPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSB--CCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCC
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhh--ccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCC
Confidence 347999999999999999999999986422 11345578899999999999 8999999999999999999999999
Q ss_pred HHHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHHHHHHHHHcCCCC
Q psy8763 189 PVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADL 250 (641)
Q Consensus 189 ~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~ 250 (641)
|||+|+..|+.+++++|++++++ ++..+..|.||||+|+..|+.+++++|+++|++.
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad-----~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKAS-----IEIANESGETPLDIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC-----CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 99999999999999999999998 6899999999999999999999999999999854
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=4.3e-21 Score=182.59 Aligned_cols=163 Identities=23% Similarity=0.191 Sum_probs=106.4
Q ss_pred CCCchHHHHHHHc-CCHHHHHHHHhcCCCcchhHhhhcCCCcccCC--CCCCcHHHHHHHhCCHHHHHHHHHhcccCCCc
Q psy8763 65 EHGRTALHIAAIY-DFDECARILVSEQPECDWIMVKDFGASLKRAC--SNGYYPIHDAAKNASSKTMEVFLQFGESIGCS 141 (641)
Q Consensus 65 ~~g~t~L~~A~~~-g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~ 141 (641)
..+.|+||.|+.. |+.+++++|+++ |++++..+ ..|.||||+|+..|+.+++++|+++|+++
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~------------Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv--- 261 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAH------------GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV--- 261 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHT------------TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT---
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHc------------CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC---
Confidence 3456788888888 888888888888 88888877 78888888888888888888888888886
Q ss_pred hhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCccccccccCC
Q psy8763 142 REEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTD 221 (641)
Q Consensus 142 ~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~ 221 (641)
+..|..|.||||+|+..|+.++|++|+++|++++..+..|.||||+|+..|+.+++++|+..+..... ....+
T Consensus 262 -----n~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~--~~~~~ 334 (368)
T 3jue_A 262 -----NQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAE--AAQGQ 334 (368)
T ss_dssp -----TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-----------
T ss_pred -----CCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccc--ccccC
Confidence 45678888888888888888888888888888888888888888888888888888888876644311 12334
Q ss_pred CCCCcHHHHHHhcCc--HHHHHHHHHcCCC
Q psy8763 222 AQKMTPLHCAAMFDR--CDVVQYLIDEGAD 249 (641)
Q Consensus 222 ~~~~t~L~~A~~~~~--~~iv~~Ll~~g~~ 249 (641)
..+.|++..+..... .+-.+.|..++.+
T Consensus 335 ~~~~t~l~i~~~~~~~~~~~~ekl~r~~~~ 364 (368)
T 3jue_A 335 AGDETYLDIFRDFSLMASDDPEKLSRRSHD 364 (368)
T ss_dssp ------------------------------
T ss_pred CCCCCHHHHHHHHHhhcCCCHHHHHhcCCC
Confidence 455666665554432 2334444444443
No 110
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.85 E-value=2.7e-21 Score=152.98 Aligned_cols=107 Identities=25% Similarity=0.291 Sum_probs=72.0
Q ss_pred CCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccC
Q psy8763 494 LDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKN 573 (641)
Q Consensus 494 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~ 573 (641)
+|..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|++++.+|
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~------------~~~~~~~Ll~~g~~~~~~d 72 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNG------------HAEIVKLLLAKGADVNARS 72 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTT------------CHHHHHHHTTTTCCTTCCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC------------cHHHHHHHHHcCCCCcccC
Confidence 4556666666666666666666666666666666666666666666666 6666666666666666666
Q ss_pred CCCCChHHHHHhcCCHHHHHHHHhcCCCccccccCCCCCChh
Q psy8763 574 NSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTP 615 (641)
Q Consensus 574 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~d~~g~t~ 615 (641)
..|.||||+|+..++.+++++|+++|++ ++..+..|.||
T Consensus 73 ~~g~tpl~~A~~~~~~~~~~~Ll~~ga~---~n~~~~~~~~~ 111 (115)
T 2l6b_A 73 KDGNTPEHLAKKNGHHEIVKLLDAKGAD---VNARSWGSSHH 111 (115)
T ss_dssp TTCCCTTHHHHTTTCHHHHHHHHTTSSS---HHHHSCCCC--
T ss_pred CCCCCHHHHHHHCCCHHHHHHHHHcCCC---CCcCCcccccc
Confidence 6777777777777777777777777766 66666666665
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=8.5e-21 Score=191.18 Aligned_cols=135 Identities=17% Similarity=0.141 Sum_probs=96.8
Q ss_pred cchhhHHHhcCCHHHHHHHHhcCCccccccC------CCCCchHHHHHHH---cCCHHHHHHHHhcCCCcchhHhhhcCC
Q psy8763 33 QAVLHLATELNKVPILLILLQYKDMIDILQG------GEHGRTALHIAAI---YDFDECARILVSEQPECDWIMVKDFGA 103 (641)
Q Consensus 33 ~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~------~~~g~t~L~~A~~---~g~~~iv~~Ll~~~~~~~~~~~~~~g~ 103 (641)
.+.||.|+..|+.++|+.|++.|++ ++.. +..|.||||+||. .|+.++|++|+++ |+
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~--~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~------------ga 198 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQD--FGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN------------GG 198 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCC--SSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH------------SC
T ss_pred HHHHHHHHhccCHHHHHHHHhhccc--ccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc------------CC
Confidence 3568888888888888888888864 3333 6678888888865 7888888888887 78
Q ss_pred CcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCC
Q psy8763 104 SLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQ 183 (641)
Q Consensus 104 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~ 183 (641)
+++..|..|+||||+|+..|+.+++++|+++|+++ +..|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 199 ~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~--------~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~-- 268 (497)
T 3lvq_E 199 HLDAKAADGNTALHYAALYNQPDCLKLLLKGRALV--------GTVNEAGETALDIARKKHHKECEELLEQAQAGTFA-- 268 (497)
T ss_dssp CTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCC--------SCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC------
T ss_pred CCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC--------CCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC--
Confidence 88888888888888888888888888888888876 45677888888888888888888888888887765
Q ss_pred CCCCcHHHHHHH
Q psy8763 184 FDLSTPVHLACS 195 (641)
Q Consensus 184 ~~~~t~l~~A~~ 195 (641)
+|+|.+..
T Consensus 269 ----~~~h~~~~ 276 (497)
T 3lvq_E 269 ----FPLHVDYS 276 (497)
T ss_dssp ------------
T ss_pred ----Ccceeecc
Confidence 46665543
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=4.2e-21 Score=151.88 Aligned_cols=108 Identities=28% Similarity=0.287 Sum_probs=93.7
Q ss_pred cCCCCCCcHHHHHHhcCChhHHHHHHHcCCCCCcCCCCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHh
Q psy8763 460 STDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLV 539 (641)
Q Consensus 460 ~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~ 539 (641)
.+|..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAK 83 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 35777889999999999999999999889888888888999999999888999999999999998888888999999998
Q ss_pred hcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCCCCCh
Q psy8763 540 LNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESP 579 (641)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~ 579 (641)
..+ ..+++++|+++|++++.++..|.||
T Consensus 84 ~~~------------~~~~~~~Ll~~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 84 KNG------------HHEIVKLLDAKGADVNARSWGSSHH 111 (115)
T ss_dssp TTT------------CHHHHHHHHTTSSSHHHHSCCCC--
T ss_pred HCC------------CHHHHHHHHHcCCCCCcCCcccccc
Confidence 888 8888999999999999888888877
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.75 E-value=3.5e-18 Score=133.21 Aligned_cols=97 Identities=19% Similarity=0.184 Sum_probs=84.6
Q ss_pred CCcccccccCCCcchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhh
Q psy8763 21 SGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKD 100 (641)
Q Consensus 21 ~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~ 100 (641)
.+......|..|.||||+|+..|+.+++++|+++|+ +++..|..|.||||+|+..|+.+++++|+++
T Consensus 13 ~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~--~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~----------- 79 (110)
T 2zgd_A 13 LVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGA--DVAAKDKNGSTPLHLAARNGHLEVVKLLLEA----------- 79 (110)
T ss_dssp ---------CCHHHHHHHHHHHTCHHHHHHHHHTTC--CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-----------
T ss_pred CCCcccccCCccchHHHHHHHcCCHHHHHHHHHcCC--CCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-----------
Confidence 444567789999999999999999999999999997 6677889999999999999999999999999
Q ss_pred cCCCcccCCCCCCcHHHHHHHhCCHHHHHHH
Q psy8763 101 FGASLKRACSNGYYPIHDAAKNASSKTMEVF 131 (641)
Q Consensus 101 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~L 131 (641)
|++++..+..|.||||+|+..|+.+++++|
T Consensus 80 -ga~~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 80 -GADVXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp -TCCTTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred -CCCccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 999999999999999999999999999986
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.74 E-value=3.3e-18 Score=133.37 Aligned_cols=88 Identities=25% Similarity=0.286 Sum_probs=40.7
Q ss_pred CCCCCHHHHHHhcCCHHHHHHHHHcCCCccccccCCCchhHHHhhcCCCchhhHHHHHHHHHHHHHHhhcCCcccccCCC
Q psy8763 496 KEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNS 575 (641)
Q Consensus 496 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~Ll~~g~~~~~~~~~ 575 (641)
..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..+ +.+++++|+++|++++.+|..
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~------------~~~~v~~Ll~~ga~~~~~d~~ 89 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNG------------HLEVVKLLLEAGADVXAQDKF 89 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT------------CHHHHHHHHHTTCCTTCCCTT
T ss_pred CccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC------------CHHHHHHHHHcCCCccccccC
Confidence 33444444444444444444444444444444444444444444444 444444444444444444444
Q ss_pred CCChHHHHHhcCCHHHHHHH
Q psy8763 576 NESPLHLAARYGRYNTVKKL 595 (641)
Q Consensus 576 g~t~L~~A~~~~~~~~v~~L 595 (641)
|.||||+|+..|+.+++++|
T Consensus 90 g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 90 GKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp SCCHHHHHHHHTCHHHHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHh
Confidence 55555555555555555443
No 115
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=55.08 E-value=76 Score=25.81 Aligned_cols=131 Identities=10% Similarity=0.002 Sum_probs=83.5
Q ss_pred CchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCCCCC-cHHHHHHHhCCHHHHHHHHHhcccCCCchhhh
Q psy8763 67 GRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSNGY-YPIHDAAKNASSKTMEVFLQFGESIGCSREEM 145 (641)
Q Consensus 67 g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~g~-t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~ 145 (641)
-.+=+..|...|+++++.-+.+. .. +..-+ .-=..|...|+.++++.-..+..+.
T Consensus 8 ~~~rF~LAL~lg~l~~A~e~a~~------------l~-----~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~------- 63 (177)
T 3mkq_B 8 PHIRFDLALEYGNLDAALDEAKK------------LN-----DSITWERLIQEALAQGNASLAEMIYQTQHSF------- 63 (177)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH------------HC-----CHHHHHHHHHHHHHTTCHHHHHHHHHHTTCH-------
T ss_pred hHHHHHHHHhcCCHHHHHHHHHH------------hC-----CHHHHHHHHHHHHHcCChHHHHHHHHHhCCH-------
Confidence 35668899999999998887764 10 01111 2335688899999999988875443
Q ss_pred hccccCCCChHHHHHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHHHHHHHcCcHH-HHHHHHhcCCCccccccccCCCCC
Q psy8763 146 ISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALD-IVRLMFNLQPSEKLVCLNSTDAQK 224 (641)
Q Consensus 146 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~-iv~~Ll~~~~~~~~~~~~~~~~~~ 224 (641)
...+......|+.+-++.+.+. -....+...+++.+...|+.+ .+++|.+.+.-
T Consensus 64 --------~~L~~Ly~~tg~~e~L~kla~i----A~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~------------- 118 (177)
T 3mkq_B 64 --------DKLSFLYLVTGDVNKLSKMQNI----AQTREDFGSMLLNTFYNNSTKERSSIFAEGGSL------------- 118 (177)
T ss_dssp --------HHHHHHHHHHTCHHHHHHHHHH----HHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCH-------------
T ss_pred --------HHHHHHHHHhCCHHHHHHHHHH----HHHCccHHHHHHHHHHcCCHHHHHHHHHHCCCh-------------
Confidence 2445555567777777766442 111222346778887788774 66666653322
Q ss_pred CcHHHHHHhcCcHHHHHHHHHc
Q psy8763 225 MTPLHCAAMFDRCDVVQYLIDE 246 (641)
Q Consensus 225 ~t~L~~A~~~~~~~iv~~Ll~~ 246 (641)
.-+...|-.+|..++.+.+++.
T Consensus 119 ~eA~~~A~t~g~~~~a~~~~~~ 140 (177)
T 3mkq_B 119 PLAYAVAKANGDEAAASAFLEQ 140 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHcCcHHHHHHHHHH
Confidence 2355667788888888888764
No 116
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=42.84 E-value=1.3e+02 Score=24.35 Aligned_cols=132 Identities=9% Similarity=-0.019 Sum_probs=87.1
Q ss_pred cchhhHHHhcCCHHHHHHHHhcCCccccccCCCCCchHHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCCCC
Q psy8763 33 QAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSNG 112 (641)
Q Consensus 33 ~t~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~g 112 (641)
.+=+.+|.+.|++++..-+.+... + ...-..-=..|...|+.++++.-..+- - +-
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l~--~----~~~Wk~Lg~~AL~~gn~~lAe~cy~~~------------~-------D~ 63 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKLN--D----SITWERLIQEALAQGNASLAEMIYQTQ------------H-------SF 63 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHC--C----HHHHHHHHHHHHHTTCHHHHHHHHHHT------------T-------CH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHhC--C----HHHHHHHHHHHHHcCChHHHHHHHHHh------------C-------CH
Confidence 456778999999999988766321 0 011223345777889999999988872 1 11
Q ss_pred CcHHHHHHHhCCHHHHHHHHHhcccCCCchhhhhccccCCCChHHHHHHhCCCH-HHHHHHHHcCCCCCcCCCCCCcHHH
Q psy8763 113 YYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDF-KAVELCLKSGAKISTQQFDLSTPVH 191 (641)
Q Consensus 113 ~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~~~~~~t~l~ 191 (641)
...+......|+.+-++.+.+.. ......+.+++.+...|++ +++++|.+.|-- .-+..
T Consensus 64 ~~L~~Ly~~tg~~e~L~kla~iA------------~~~g~~n~af~~~l~lGdv~~~i~lL~~~~r~--------~eA~~ 123 (177)
T 3mkq_B 64 DKLSFLYLVTGDVNKLSKMQNIA------------QTREDFGSMLLNTFYNNSTKERSSIFAEGGSL--------PLAYA 123 (177)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHH------------HHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCH--------HHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHH------------HHCccHHHHHHHHHHcCCHHHHHHHHHHCCCh--------HHHHH
Confidence 14566667788887777665431 1123335677778777875 566677665432 25678
Q ss_pred HHHHcCcHHHHHHHHhcC
Q psy8763 192 LACSQGALDIVRLMFNLQ 209 (641)
Q Consensus 192 ~A~~~g~~~iv~~Ll~~~ 209 (641)
+|-..|..++.+.+++.-
T Consensus 124 ~A~t~g~~~~a~~~~~~~ 141 (177)
T 3mkq_B 124 VAKANGDEAAASAFLEQA 141 (177)
T ss_dssp HHHHTTCHHHHHHHHHHT
T ss_pred HHHHcCcHHHHHHHHHHh
Confidence 888899999999888654
No 117
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=41.55 E-value=38 Score=33.46 Aligned_cols=144 Identities=10% Similarity=0.011 Sum_probs=80.1
Q ss_pred chhhHHHhcCCHHHHHHHH----hcCCccccccCCCCCchHHHHHHHcC-C-------------HHHHHHHHhcCCCcch
Q psy8763 34 AVLHLATELNKVPILLILL----QYKDMIDILQGGEHGRTALHIAAIYD-F-------------DECARILVSEQPECDW 95 (641)
Q Consensus 34 t~L~~A~~~g~~~~v~~ll----~~g~~~~~~~~~~~g~t~L~~A~~~g-~-------------~~iv~~Ll~~~~~~~~ 95 (641)
..|...++.|+.+-+..++ +.|..++. .-.+.|..|+..+ . .++++.+.+.
T Consensus 31 ~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~-----~tyn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~------ 99 (501)
T 4g26_A 31 QKLDMCSKKGDVLEALRLYDEARRNGVQLSQ-----YHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVD------ 99 (501)
T ss_dssp HHHHHTTTSCCHHHHHHHHHHHHHHTCCCCH-----HHHHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHT------
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHcCCCCCH-----hHHHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHh------
Confidence 4566778889876655554 55654432 2244555555432 1 2445555554
Q ss_pred hHhhhcCCCcccCCCCCCcHHHHHHHhCCHHHHHHHHH----hcccCCCchhhhhccccCCCChHHHHHHhCCCHHHHH-
Q psy8763 96 IMVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQ----FGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVE- 170 (641)
Q Consensus 96 ~~~~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~----~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~- 170 (641)
|..++.... .+.+...++.|+.+-+..+++ .|..++. ....+.+...+..|+.+-+.
T Consensus 100 ------G~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~----------~tyn~lI~~~~~~g~~~~A~~ 161 (501)
T 4g26_A 100 ------KVVPNEATF--TNGARLAVAKDDPEMAFDMVKQMKAFGIQPRL----------RSYGPALFGFCRKGDADKAYE 161 (501)
T ss_dssp ------TCCCCHHHH--HHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCH----------HHHHHHHHHHHHTTCHHHHHH
T ss_pred ------CCCCCHHHH--HHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcc----------ceehHHHHHHHHCCCHHHHHH
Confidence 544443322 145667778899876655554 4444321 01134455567788765444
Q ss_pred ---HHHHcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhc
Q psy8763 171 ---LCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNL 208 (641)
Q Consensus 171 ---~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ 208 (641)
.+.+.|..|+.... .+.+...++.|+.+-+..+++.
T Consensus 162 l~~~M~~~G~~Pd~~ty--~~Li~~~~~~g~~d~A~~ll~~ 200 (501)
T 4g26_A 162 VDAHMVESEVVPEEPEL--AALLKVSMDTKNADKVYKTLQR 200 (501)
T ss_dssp HHHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCHHHH--HHHHHHHhhCCCHHHHHHHHHH
Confidence 45567877765432 2556667888888766666543
No 118
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=35.37 E-value=31 Score=19.30 Aligned_cols=19 Identities=16% Similarity=0.123 Sum_probs=15.8
Q ss_pred HHHHHHhCCHHHHHHHHHh
Q psy8763 116 IHDAAKNASSKTMEVFLQF 134 (641)
Q Consensus 116 L~~A~~~g~~~~v~~Ll~~ 134 (641)
+..||..|+.+.++.|-..
T Consensus 17 iyvA~seGd~etv~~Le~Q 35 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKAK 35 (40)
T ss_dssp HHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHHH
Confidence 6789999999999988643
No 119
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=32.92 E-value=32 Score=33.97 Aligned_cols=151 Identities=13% Similarity=0.014 Sum_probs=80.3
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCcchhHhhhcCCCcccCCCCCCcHHHHHHHhCC--------------HHHHHHHHHhc
Q psy8763 70 ALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSNGYYPIHDAAKNAS--------------SKTMEVFLQFG 135 (641)
Q Consensus 70 ~L~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~g~~~~~~~~~g~t~L~~A~~~g~--------------~~~v~~Ll~~~ 135 (641)
.|..+++.|+.+-+..|++.. ...|..++... ++.|..|+..+. .++.+.+.+.|
T Consensus 32 ~id~c~k~G~~~~A~~lf~~M--------~~~Gv~pd~~t---yn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G 100 (501)
T 4g26_A 32 KLDMCSKKGDVLEALRLYDEA--------RRNGVQLSQYH---YNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDK 100 (501)
T ss_dssp HHHHTTTSCCHHHHHHHHHHH--------HHHTCCCCHHH---HHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCCHHHHHHHHHHH--------HHcCCCCCHhH---HHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhC
Confidence 466777888877666665541 11244443322 245555554321 24566666777
Q ss_pred ccCCCchhhhhccccCCCChHHHHHHhCCCHHHHHH----HHHcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHH----h
Q psy8763 136 ESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVEL----CLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMF----N 207 (641)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~----Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll----~ 207 (641)
..++.. .-.+.+...++.|+.+-+.. +.+.|..++.... .+.+...++.|+.+-...++ +
T Consensus 101 ~~Pd~~----------tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~ty--n~lI~~~~~~g~~~~A~~l~~~M~~ 168 (501)
T 4g26_A 101 VVPNEA----------TFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSY--GPALFGFCRKGDADKAYEVDAHMVE 168 (501)
T ss_dssp CCCCHH----------HHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHH--HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCCCHH----------HHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCcccee--hHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 665311 11345566678888665554 4456777765432 25566678888886555544 3
Q ss_pred cCCCccccccccCCCCCCcH-HHHHHhcCcHHHHHHHH----HcCCCCC
Q psy8763 208 LQPSEKLVCLNSTDAQKMTP-LHCAAMFDRCDVVQYLI----DEGADLN 251 (641)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~t~-L~~A~~~~~~~iv~~Ll----~~g~~~~ 251 (641)
.+..+ +...++. +...+..|+.+-+..++ +.|..++
T Consensus 169 ~G~~P--------d~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps 209 (501)
T 4g26_A 169 SEVVP--------EEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVS 209 (501)
T ss_dssp TTCCC--------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBC
T ss_pred cCCCC--------CHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcC
Confidence 34332 1122333 34455677765444444 4555554
No 120
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=32.35 E-value=1.9e+02 Score=27.15 Aligned_cols=63 Identities=27% Similarity=0.298 Sum_probs=43.3
Q ss_pred HHHhCCCHHHHHHHHHcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhcCCCccccccccCCCCCCcHHHHHHhcCcHH
Q psy8763 159 SAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCD 238 (641)
Q Consensus 159 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ 238 (641)
..+..|+...|+..+..|.|++.+ .|....+..++. + ....|.|.+|.|++..+.+
T Consensus 28 ~gv~e~~~~~ve~y~~~gg~~~r~----lt~~e~~lln~~-------------------~-af~~g~tlvhlair~~r~~ 83 (454)
T 3zrh_A 28 VGVVEGDLAAIEAYKSSGGDIARQ----LTADEVRLLNRP-------------------S-AFDVGYTLVHLAIRFQRQD 83 (454)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTCC----CCHHHHHHHCCT-------------------T-TCCTTCCHHHHHHHTTCHH
T ss_pred HHHHcCChhHHHHHHhcCCchhcc----cCHHHHHHhCCC-------------------c-ccccCchhhhhhhhhhhhh
Confidence 345789999999999999888643 354544443321 1 1335778888888888888
Q ss_pred HHHHHHH
Q psy8763 239 VVQYLID 245 (641)
Q Consensus 239 iv~~Ll~ 245 (641)
++..|+.
T Consensus 84 ~l~~ll~ 90 (454)
T 3zrh_A 84 MLAILLT 90 (454)
T ss_dssp HHHHHHH
T ss_pred HHHHhhh
Confidence 8888776
No 121
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=22.84 E-value=85 Score=23.44 Aligned_cols=37 Identities=16% Similarity=0.046 Sum_probs=28.2
Q ss_pred CCCcccCCCCCCcHHHHHHHhCCHHHHHHHHHhcccC
Q psy8763 102 GASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESI 138 (641)
Q Consensus 102 g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~ 138 (641)
...+..+|..-.-++..|+.+++.++++-|+....+.
T Consensus 25 SI~L~KkDkLykDAietAa~S~d~elaEeLL~yFVe~ 61 (125)
T 3qil_A 25 SVELAKKDSLYKDAMQYASESKDTELAEELLQWFLQE 61 (125)
T ss_dssp CCCCCSCCCCSSHHHHTTTSSCCSHHHHHHHHHHTTS
T ss_pred HHHHHHhcccHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 3445555666678999999999999999999876554
Done!