RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy8763
(641 letters)
>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate
protein-protein interactions in very diverse families of
proteins. The number of ANK repeats in a protein can
range from 2 to over 20 (ankyrins, for example). ANK
repeats may occur in combinations with other types of
domains. The structural repeat unit contains two
antiparallel helices and a beta-hairpin, repeats are
stacked in a superhelical arrangement; this alignment
contains 4 consecutive repeats.
Length = 126
Score = 98.2 bits (245), Expect = 2e-24
Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 12/138 (8%)
Query: 459 NSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLV 518
N+ D TPLH AA +VV+ L++ GAD+N D + R+PL LAA G + V L+
Sbjct: 1 NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60
Query: 519 RNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNES 578
A++ +D + LHL NG + + L+ GA +N ++ +
Sbjct: 61 EKGADVNARDKDGNTPLHLAARNGNLDVVKL------------LLKHGADVNARDKDGRT 108
Query: 579 PLHLAARYGRYNTVKKLL 596
PLHLAA+ G VK LL
Sbjct: 109 PLHLAAKNGHLEVVKLLL 126
Score = 98.2 bits (245), Expect = 2e-24
Identities = 50/119 (42%), Positives = 69/119 (57%), Gaps = 5/119 (4%)
Query: 150 DAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQ 209
D +G PLH A G + V+L L++GA ++ + D TP+HLA G L+IV+L+
Sbjct: 4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL--- 60
Query: 210 PSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRG 268
EK +N+ D TPLH AA DVV+ L+ GAD+N DK+ R+PL LAA G
Sbjct: 61 --EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNG 117
Score = 97.1 bits (242), Expect = 6e-24
Identities = 51/126 (40%), Positives = 72/126 (57%), Gaps = 5/126 (3%)
Query: 393 EGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPS 452
+G PLH A G + V+L L++GA ++ + D TP+HLA G L+IV+L+
Sbjct: 6 DGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL----- 60
Query: 453 EKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWK 512
EK +N+ D TPLH AA DVV+ L+ GAD+N DK+ R+PL LAA G +
Sbjct: 61 EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLE 120
Query: 513 TVLTLV 518
V L+
Sbjct: 121 VVKLLL 126
Score = 93.2 bits (232), Expect = 1e-22
Identities = 50/139 (35%), Positives = 70/139 (50%), Gaps = 15/139 (10%)
Query: 492 NVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAE 551
N D++ R+PL LAAS G + V L+ N A++ KD + R LHL NG I +
Sbjct: 1 NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKL-- 58
Query: 552 EVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGE 611
L+ GA +N ++ +PLHLAAR G + VK LL +N D +
Sbjct: 59 ----------LLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKH---GADVNARDKD 105
Query: 612 GLTPLHIASKEGFHYSVSI 630
G TPLH+A+K G V +
Sbjct: 106 GRTPLHLAAKNGHLEVVKL 124
Score = 90.5 bits (225), Expect = 1e-21
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 218 NSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKT----- 272
N+ D TPLH AA +VV+ L++ GAD+N D + R+PL LAA G +
Sbjct: 1 NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60
Query: 273 -NGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDF 331
G + + LHLA + ++ +LL++ ++ + GRT LH+AA
Sbjct: 61 EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNAR--DKDGRTPLHLAAKNGH 118
Query: 332 DECARILV 339
E ++L+
Sbjct: 119 LEVVKLLL 126
Score = 82.4 bits (204), Expect = 8e-19
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Query: 317 EHGRTALHIAAIYDFDECARILVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFG 376
E GRT LH+AA E ++L++ GA + ++G P+H AAKN + +++ L+ G
Sbjct: 5 EDGRTPLHLAASNGHLEVVKLLLE-NGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKG 63
Query: 377 ESIGCSREEMISLFAAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACS 436
++ +GN PLH A G+ V+L LK GA ++ + D TP+HLA
Sbjct: 64 AD--------VNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAK 115
Query: 437 QGALDIVRLM 446
G L++V+L+
Sbjct: 116 NGHLEVVKLL 125
Score = 80.9 bits (200), Expect = 3e-18
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 20/141 (14%)
Query: 65 EHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSNGYYPIHDAAKNAS 124
E GRT LH+AA E ++L+ + GA + ++G P+H AAKN
Sbjct: 5 EDGRTPLHLAASNGHLEVVKLLL------------ENGADVNAKDNDGRTPLHLAAKNGH 52
Query: 125 SKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQF 184
+ +++ L+ G + + D +GN PLH A G+ V+L LK GA ++ +
Sbjct: 53 LEIVKLLLEKGADV--------NARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDK 104
Query: 185 DLSTPVHLACSQGALDIVRLM 205
D TP+HLA G L++V+L+
Sbjct: 105 DGRTPLHLAAKNGHLEVVKLL 125
Score = 77.4 bits (191), Expect = 4e-17
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 13/135 (9%)
Query: 110 SNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAV 169
+G P+H AA N + +++ L+ G + + D +G PLH A G + V
Sbjct: 5 EDGRTPLHLAASNGHLEVVKLLLENGADV--------NAKDNDGRTPLHLAAKNGHLEIV 56
Query: 170 ELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLH 229
+L L+ GA ++ + D +TP+HLA G LD+V+L+ + +N+ D TPLH
Sbjct: 57 KLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLL-----KHGADVNARDKDGRTPLH 111
Query: 230 CAAMFDRCDVVQYLI 244
AA +VV+ L+
Sbjct: 112 LAAKNGHLEVVKLLL 126
Score = 65.9 bits (161), Expect = 5e-13
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 22/145 (15%)
Query: 27 ILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARIL 86
+ + LHLA + ++ +LL+ ++ GRT LH+AA E ++L
Sbjct: 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAK--DNDGRTPLHLAAKNGHLEIVKLL 59
Query: 87 VSEQPECDWIMVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMI 146
+ + GA + +G P+H AA+N + +++ L+ G +
Sbjct: 60 L------------EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGAD--------V 99
Query: 147 SLFDAEGNLPLHSAVHGGDFKAVEL 171
+ D +G PLH A G + V+L
Sbjct: 100 NARDKDGRTPLHLAAKNGHLEVVKL 124
Score = 55.5 bits (134), Expect = 2e-09
Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 14/113 (12%)
Query: 20 SSGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDF 79
+G + +N + LHLA + + I+ +LL+ ++ + G T LH+AA
Sbjct: 28 ENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNAR--DKDGNTPLHLAARNGN 85
Query: 80 DECARILVSEQPECDWIMVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFL 132
+ ++L+ + +D +G P+H AAKN + +++ L
Sbjct: 86 LDVVKLLLK---HGADVNARD---------KDGRTPLHLAAKNGHLEVVKLLL 126
>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional.
Length = 434
Score = 91.9 bits (228), Expect = 8e-20
Identities = 74/243 (30%), Positives = 117/243 (48%), Gaps = 30/243 (12%)
Query: 377 ESIGCSREEMISLFAAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACS 436
E I ++ I++ E PL A+ GD K VEL +K GA I+ + P+ A
Sbjct: 18 EKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIK 77
Query: 437 QGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDK 496
GA DI+ KL+ N D + P+ C D+++ ++D G D+N+ D
Sbjct: 78 IGAHDII----------KLLIDNGVDTS-ILPIPCIEK----DMIKTILDCGIDVNIKDA 122
Query: 497 EKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAV 556
E ++ L A +G +++ L A++ ++D N +H+ IK ++ +
Sbjct: 123 ELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIA-------IKHNFFDIIKL 175
Query: 557 FLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPL 616
L E GA N+K+N+ ESPLH AA YG Y +K L+ G+ I+N+ G TPL
Sbjct: 176 LL-EK----GAYANVKDNNGESPLHNAAEYGDYACIKLLIDH--GNHIMNKCK-NGFTPL 227
Query: 617 HIA 619
H A
Sbjct: 228 HNA 230
Score = 75.0 bits (184), Expect = 3e-14
Identities = 85/375 (22%), Positives = 141/375 (37%), Gaps = 102/375 (27%)
Query: 136 ESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACS 195
E I ++ I++ E PL A+ GD K VEL +K GA I+ + P+ A
Sbjct: 18 EKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIK 77
Query: 196 QGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDK 255
GA DI+ KL+ N D + P+ C D+++ ++D G D+N+ D
Sbjct: 78 IGAHDII----------KLLIDNGVDTS-ILPIPCIEK----DMIKTILDCGIDVNIKDA 122
Query: 256 EKRSPLLLAASRGGWKTNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQG 315
E ++ LH A + + + +L +Y
Sbjct: 123 ELKT---------------------------FLHYAIKKGDLESIKMLFEYG-------- 147
Query: 316 GEHGRTALHIAAIYDFDECARILVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQF 375
A + ++D NG YPIH A K+ +++ L+
Sbjct: 148 -------------------ADVNIED---------DNGCYPIHIAIKHNFFDIIKLLLEK 179
Query: 376 GESIGCSREEMISLFAAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLAC 435
G G PLH+A GD+ ++L + G I + + TP+H A
Sbjct: 180 GAYANVKDN--------NGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNA- 230
Query: 436 SQGALDIVRLMFNLQPSEKLV---CLNSTDAQKMTPLHCAAMFDRC--DVVQYLIDEGAD 490
++ N E L+ +N D TPLH A C D++ L+ AD
Sbjct: 231 ---------IIHNRSAIELLINNASINDQDIDGSTPLHHAINPP-CDIDIIDILLYHKAD 280
Query: 491 LNVLDKEKRSPLLLA 505
+++ D + +P+ A
Sbjct: 281 ISIKDNKGENPIDTA 295
Score = 65.0 bits (158), Expect = 5e-11
Identities = 52/213 (24%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 398 LHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVC 457
LH A+ GD +++++ + GA ++ + + P+H+A DI++L+ EK
Sbjct: 128 LHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLL-----EKGAY 182
Query: 458 LNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTL 517
N D +PLH AA + ++ LID G + K +PL A ++ + L
Sbjct: 183 ANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHN--RSAIEL 240
Query: 518 VRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNE 577
+ N A+I +DI+ LH H ++ + + L+ A I++K+N E
Sbjct: 241 LINNASINDQDIDGSTPLH--------HAINPPCDIDII---DILLYHKADISIKDNKGE 289
Query: 578 SPLHLAARY-GRYNTVKKLLSSERGSFIINESD 609
+P+ A +Y + +K ++++ + +I E+D
Sbjct: 290 NPIDTAFKYINKDPVIKDIIAN---AVLIKEAD 319
Score = 63.4 bits (154), Expect = 2e-10
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 24/173 (13%)
Query: 97 MVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLP 156
M+ ++GA + NG YPIH A K+ +++ L+ G ++ D G P
Sbjct: 142 MLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKG--------AYANVKDNNGESP 193
Query: 157 LHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLV- 215
LH+A GD+ ++L + G I + + TP+H A ++ N E L+
Sbjct: 194 LHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNA----------IIHNRSAIELLIN 243
Query: 216 --CLNSTDAQKMTPLHCAAMFDRC--DVVQYLIDEGADLNVLDKEKRSPLLLA 264
+N D TPLH A C D++ L+ AD+++ D + +P+ A
Sbjct: 244 NASINDQDIDGSTPLHHAINPP-CDIDIIDILLYHKADISIKDNKGENPIDTA 295
Score = 62.3 bits (151), Expect = 3e-10
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 410 VELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPL 469
++ L G ++ + +L T +H A +G L+ ++++F +N D P+
Sbjct: 107 IKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGAD-----VNIEDDNGCYPI 161
Query: 470 HCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDI 529
H A + D+++ L+++GA NV D SPL AA G + + L+ + +I+ K
Sbjct: 162 HIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCK 221
Query: 530 NRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRY 589
N LH +++ I E LIN A IN ++ +PLH A
Sbjct: 222 NGFTPLHNAIIHNRSAI-------------ELLIN-NASINDQDIDGSTPLHHAINPPCD 267
Query: 590 NTVKKLLSSERGSFIINESDGEGLTPLHIASK 621
+ +L + I ++ GE P+ A K
Sbjct: 268 IDIIDILLYHKADISIKDNKGE--NPIDTAFK 297
Score = 44.6 bits (105), Expect = 1e-04
Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 31/172 (18%)
Query: 457 CLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLT 516
C+N + + TPL A +V+ I GAD+N ++ + PLL A G +
Sbjct: 27 CINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKL 86
Query: 517 LVRNKAN---ILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKN 573
L+ N + + + I + I + +++ G +N+K+
Sbjct: 87 LIDNGVDTSILPIPCIEKDMI-------------------------KTILDCGIDVNIKD 121
Query: 574 NSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFH 625
++ LH A + G ++K L +N D G P+HIA K F
Sbjct: 122 AELKTFLHYAIKKGDLESIKMLFEYGAD---VNIEDDNGCYPIHIAIKHNFF 170
>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional.
Length = 471
Score = 83.5 bits (207), Expect = 5e-17
Identities = 62/238 (26%), Positives = 101/238 (42%), Gaps = 28/238 (11%)
Query: 394 GNLPLHSAVHGG---DFKAVELCLKSGAKISTQQFDLSTPVHL-ACSQGALDIVRLMFNL 449
G PLH +H V L L++GA ++ + TP+HL + LD+++L+
Sbjct: 47 GKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLI-- 104
Query: 450 QPSEKLVCLNSTDAQKMTPLH--CAAMFDRCDVVQYLIDEGADLNVLDKEKRSPL--LLA 505
+ +N+ D TPLH + V++ L+ +GAD+N LD +PL LL
Sbjct: 105 ---KAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLK 161
Query: 506 ASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINL 565
+ + + L+ A++ D R++LH H + + A + LI
Sbjct: 162 SRNANVELLRLLIDAGADVYAVDDRFRSLLH--------HHLQSFKPRARIV--RELIRA 211
Query: 566 GACINLKNNSNESPLHLAARYG--RYNTVKKLLSSERGSFIINESDGEGLTPLHIASK 621
G + +PLH A + + V LL G IN + G TPLH A+
Sbjct: 212 GCDPAATDMLGNTPLHSMATGSSCKRSLVLPLL--IAGI-SINARNRYGQTPLHYAAV 266
Score = 65.4 bits (160), Expect = 4e-11
Identities = 79/321 (24%), Positives = 120/321 (37%), Gaps = 63/321 (19%)
Query: 153 GNLPLHSAVHGG---DFKAVELCLKSGAKISTQQFDLSTPVHL-ACSQGALDIVRLMFNL 208
G PLH +H V L L++GA ++ + TP+HL + LD+++L+
Sbjct: 47 GKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLI-- 104
Query: 209 QPSEKLVCLNSTDAQKMTPLH--CAAMFDRCDVVQYLIDEGADLNVLDKEKRSPL--LLA 264
+ +N+ D TPLH + V++ L+ +GAD+N LD +PL LL
Sbjct: 105 ---KAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLL- 160
Query: 265 ASRGGWKTNGVNTRILNNKKQAVLHLATELNKVPILLIL----LQYKDMIDILQGGEHGR 320
K+ N +L LLI + D R
Sbjct: 161 ------KSRNANVELLR------------------LLIDAGADVYAVDDR--------FR 188
Query: 321 TALHIAAIYDFDECARILVKDFGASLKRACSN--GYYPIHDAAKNASSKT--MEVFLQFG 376
+ LH F ARI+ + A A ++ G P+H A +S K + L G
Sbjct: 189 SLLHHHLQS-FKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAG 247
Query: 377 ESIGCSREEMISLFAAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACS 436
SI + G PLH A + +A + GA I+ D +TP+ L
Sbjct: 248 ISI--------NARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVR 299
Query: 437 QGALDIVRLMFNLQPSEKLVC 457
VR PS + V
Sbjct: 300 NNNGRAVRAALAKNPSAETVA 320
Score = 56.2 bits (136), Expect = 3e-08
Identities = 75/307 (24%), Positives = 122/307 (39%), Gaps = 52/307 (16%)
Query: 311 DILQGGEHGRTALHIAAIYDFDECARI--LVKDFGASLKRACSNGYYPIHDAAKNASS-K 367
D+ GE+G+T LH+ Y ++ I L+ + GA + G+ P+H NA++
Sbjct: 39 DVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLD 98
Query: 368 TMEVFLQFG----ESIGCSREEMISLFAAEGNLPLHSAVHGG--DFKAVELCLKSGAKIS 421
+++ ++ G G PLH + G + K + L L+ GA ++
Sbjct: 99 VIKLLIKAGADVNAKDKV------------GRTPLHVYLSGFNINPKVIRLLLRKGADVN 146
Query: 422 TQQFDLSTPVH-LACSQGA-LDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMF--DR 477
TP+ L S+ A ++++RL+ + + + D + + LH R
Sbjct: 147 ALDLYGMTPLAVLLKSRNANVELLRLLI-----DAGADVYAVDDRFRSLLHHHLQSFKPR 201
Query: 478 CDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRN--KANILLKDINRRNIL 535
+V+ LI G D D +PL A+ K +LV A I IN RN
Sbjct: 202 ARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKR--SLVLPLLIAGI---SINARNRY 256
Query: 536 HLLVLNGGGHIKEFAEEVAAVFLG----ENLINLGACINLKNNSNESPLHLAARYGRYNT 591
L+ AAVF LI LGA IN ++ +PL L R
Sbjct: 257 GQTPLH-----------YAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRA 305
Query: 592 VKKLLSS 598
V+ L+
Sbjct: 306 VRAALAK 312
Score = 54.3 bits (131), Expect = 1e-07
Identities = 53/244 (21%), Positives = 101/244 (41%), Gaps = 54/244 (22%)
Query: 59 DILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSNGYYPIHD 118
D+ GE+G+T LH+ Y ++ I+ +++ + GA + G+ P+H
Sbjct: 39 DVNFRGEYGKTPLHLYLHYSSEKVKDIVR--------LLL-EAGADVNAPERCGFTPLHL 89
Query: 119 AAKNASS-KTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGG--DFKAVELCLKS 175
NA++ +++ ++ G + + D G PLH + G + K + L L+
Sbjct: 90 YLYNATTLDVIKLLIKAGADV---NAK-----DKVGRTPLHVYLSGFNINPKVIRLLLRK 141
Query: 176 GAKISTQQFDLSTPVH-LACSQGA-LDIVRLMF----------------------NLQPS 211
GA ++ TP+ L S+ A ++++RL+ + +P
Sbjct: 142 GADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPR 201
Query: 212 EKLV--------CLNSTDAQKMTPLHCAAMFDRCD--VVQYLIDEGADLNVLDKEKRSPL 261
++V +TD TPLH A C +V L+ G +N ++ ++PL
Sbjct: 202 ARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPL 261
Query: 262 LLAA 265
AA
Sbjct: 262 HYAA 265
Score = 49.6 bits (119), Expect = 3e-06
Identities = 75/370 (20%), Positives = 128/370 (34%), Gaps = 89/370 (24%)
Query: 165 DFKAVELCLKSGAKISTQQFDLSTPVH--LACSQGA-LDIVRLMFNLQPSEKLVCLNSTD 221
+ V L +GA ++ + TP+H L S DIVRL+ E +N+ +
Sbjct: 26 TVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLL-----EAGADVNAPE 80
Query: 222 AQKMTPLHCAAMFD-RCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTNGVNTRIL 280
TPLH DV++ LI GAD+N DK R+PL +
Sbjct: 81 RCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGRTPLHV----------------- 123
Query: 281 NNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVK 340
+L+ ++ +LL+ D+ +G T L + L+K
Sbjct: 124 --------YLSGFNINPKVIRLLLRKG--ADVNALDLYGMTPLAV------------LLK 161
Query: 341 DFGAS---LKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLP 397
A+ L+ G A + + LQ + R ++ G P
Sbjct: 162 SRNANVELLRLLIDAGADVY--AVDDRFRSLLHHHLQSFKP----RARIVRELIRAGCDP 215
Query: 398 LHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLA---CSQGALDIVRLMFNLQPSEK 454
+ + G +TP+H S ++ L+
Sbjct: 216 AATDMLG-----------------------NTPLHSMATGSSCKRSLVLPLL------IA 246
Query: 455 LVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTV 514
+ +N+ + TPLH AA+F+ + LI GAD+N + + +PL L + V
Sbjct: 247 GISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAV 306
Query: 515 LTLVRNKANI 524
+ +
Sbjct: 307 RAALAKNPSA 316
Score = 39.6 bits (93), Expect = 0.004
Identities = 49/248 (19%), Positives = 92/248 (37%), Gaps = 44/248 (17%)
Query: 43 NKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFG 102
+ ++ +L++ D+ + GRT LH+ Y V ++++ G
Sbjct: 95 TTLDVIKLLIKAG--ADVNAKDKVGRTPLHV---YLSGFNINPKVIR------LLLR-KG 142
Query: 103 ASLKRACSNGYYPIHDAAK--NASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSA 160
A + G P+ K NA+ + + + + G + + D LH
Sbjct: 143 ADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADV-YAV-------DDRFRSLLHH- 193
Query: 161 VHGGDFKA----VELCLKSGAKISTQQFDLSTPVHLA---CSQGALDIVRLMFNLQPSEK 213
H FK V +++G + +TP+H S ++ L+
Sbjct: 194 -HLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLL------IA 246
Query: 214 LVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTN 273
+ +N+ + TPLH AA+F+ + LI GAD+N + + +PL L
Sbjct: 247 GISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNN----- 301
Query: 274 GVNTRILN 281
N R +
Sbjct: 302 --NGRAVR 307
Score = 35.8 bits (83), Expect = 0.074
Identities = 30/116 (25%), Positives = 45/116 (38%), Gaps = 11/116 (9%)
Query: 503 LLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENL 562
LL AS + V L+ A++ + + LHL + ++ + V L
Sbjct: 19 LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSS---EKVKDIVRL------L 69
Query: 563 INLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHI 618
+ GA +N +PLHL V KLL +N D G TPLH+
Sbjct: 70 LEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGAD--VNAKDKVGRTPLHV 123
>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies).
Length = 91
Score = 72.7 bits (179), Expect = 8e-16
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 7/98 (7%)
Query: 157 LHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVC 216
LH A G+ + V+L L+ GA ++ D T +HLA G L+IV+L+
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLG--DTDTALHLAARNGNLEIVKLLLEHGAD----- 53
Query: 217 LNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLD 254
+N+ D T LH AA ++V+ L++ GAD+N+ D
Sbjct: 54 VNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91
Score = 70.0 bits (172), Expect = 7e-15
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Query: 432 HLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADL 491
HLA G L++V+L+ + T LH AA ++V+ L++ GAD+
Sbjct: 2 HLAAKNGNLELVKLLLEKGA-------DVNLGDTDTALHLAARNGNLEIVKLLLEHGADV 54
Query: 492 NVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKD 528
N DK+ + L LAA G + V L+ + A+I LKD
Sbjct: 55 NAKDKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91
Score = 60.7 bits (148), Expect = 1e-11
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 191 HLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADL 250
HLA G L++V+L+ + T LH AA ++V+ L++ GAD+
Sbjct: 2 HLAAKNGNLELVKLLLEKGA-------DVNLGDTDTALHLAARNGNLEIVKLLLEHGADV 54
Query: 251 NVLDKEKRSPLLLAASRG 268
N DK+ + L LAA G
Sbjct: 55 NAKDKDGNTALHLAARNG 72
Score = 60.0 bits (146), Expect = 2e-11
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 31/113 (27%)
Query: 228 LHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTNGVNTRILNNKKQAV 287
LH AA ++V+ L+++GAD+N+ D +
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLGDTD-----------------------------TA 31
Query: 288 LHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVK 340
LHLA + I+ +LL++ D+ + G TALH+AA E ++L++
Sbjct: 32 LHLAARNGNLEIVKLLLEHG--ADVNAKDKDGNTALHLAARNGNLEIVKLLLE 82
Score = 58.0 bits (141), Expect = 1e-10
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 14/105 (13%)
Query: 469 LHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKD 528
LH AA ++V+ L+++GAD+N+ + + L LAA G + V L+ + A++ KD
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNL--GDTDTALHLAARNGNLEIVKLLLEHGADVNAKD 58
Query: 529 INRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKN 573
+ LHL NG E+ + L+ GA INLK+
Sbjct: 59 KDGNTALHLAARNG-------NLEIVKL-----LLEHGADINLKD 91
Score = 52.6 bits (127), Expect = 9e-09
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 116 IHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKS 175
+H AAKN + + +++ L+ G + + LH A G+ + V+L L+
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLGDT----------DTALHLAARNGNLEIVKLLLEH 50
Query: 176 GAKISTQQFDLSTPVHLACSQGALDIVRLMFN 207
GA ++ + D +T +HLA G L+IV+L+
Sbjct: 51 GADVNAKDKDGNTALHLAARNGNLEIVKLLLE 82
Score = 52.6 bits (127), Expect = 9e-09
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 357 IHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGDFKAVELCLKS 416
+H AAKN + + +++ L+ G + + LH A G+ + V+L L+
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLGDT----------DTALHLAARNGNLEIVKLLLEH 50
Query: 417 GAKISTQQFDLSTPVHLACSQGALDIVRLMFN 448
GA ++ + D +T +HLA G L+IV+L+
Sbjct: 51 GADVNAKDKDGNTALHLAARNGNLEIVKLLLE 82
Score = 52.6 bits (127), Expect = 1e-08
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 562 LINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASK 621
L+ GA +NL + + LHLAAR G VK LL +N D +G T LH+A++
Sbjct: 16 LLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHG---ADVNAKDKDGNTALHLAAR 70
Query: 622 EG 623
G
Sbjct: 71 NG 72
Score = 48.0 bits (115), Expect = 3e-07
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 36 LHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDW 95
LHLA + + ++ +LL+ +++ TALH+AA E ++L+
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNLGDTD----TALHLAARNGNLEIVKLLL-------- 48
Query: 96 IMVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESI 138
+ GA + +G +H AA+N + + +++ L+ G I
Sbjct: 49 ----EHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADI 87
Score = 48.0 bits (115), Expect = 4e-07
Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 26 RILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARI 85
+ LHLA + I+ +LL++ D+ + G TALH+AA E ++
Sbjct: 22 DVNLGDTDTALHLAARNGNLEIVKLLLEHG--ADVNAKDKDGNTALHLAARNGNLEIVKL 79
Query: 86 LVSEQPECD 94
L+ + +
Sbjct: 80 LLEHGADIN 88
Score = 46.9 bits (112), Expect = 1e-06
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 323 LHIAAIYDFDECARILVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCS 382
LH+AA E ++L+ + GA + + +H AA+N + + +++ L+ G +
Sbjct: 1 LHLAAKNGNLELVKLLL-EKGADVNL--GDTDTALHLAARNGNLEIVKLLLEHGADVNAK 57
Query: 383 REEMISLFAAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQ 423
++ GN LH A G+ + V+L L+ GA I+ +
Sbjct: 58 DKD--------GNTALHLAARNGNLEIVKLLLEHGADINLK 90
Score = 46.1 bits (110), Expect = 2e-06
Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 22/112 (19%)
Query: 71 LHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSNGYYPIHDAAKNASSKTMEV 130
LH+AA E ++L+ + + + + +H AA+N + + +++
Sbjct: 1 LHLAAKNGNLELVKLLLEKGADVNL--------------GDTDTALHLAARNGNLEIVKL 46
Query: 131 FLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQ 182
L+ G + D +GN LH A G+ + V+L L+ GA I+ +
Sbjct: 47 LLEHGADVNAK--------DKDGNTALHLAARNGNLEIVKLLLEHGADINLK 90
Score = 34.5 bits (80), Expect = 0.023
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 5/52 (9%)
Query: 580 LHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFHYSVSIF 631
LHLAA+ G VK LL + + G+ T LH+A++ G V +
Sbjct: 1 LHLAAKNGNLELVKLLLEKG-----ADVNLGDTDTALHLAARNGNLEIVKLL 47
>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional.
Length = 422
Score = 75.5 bits (186), Expect = 2e-14
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 48/234 (20%)
Query: 396 LPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGA-----LDIVRLMFNLQ 450
LPL+ A + V++ L +GA I++ + STP+H + +IV+L+
Sbjct: 37 LPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYG 96
Query: 451 PSEKLVCLNSTDAQKMTPLHCAAMFDRCDV--VQYLIDEGADLNVLDKEKRSPLLLAASR 508
+N+ D +TPL A V+YL+D GA++N+ + + + L L
Sbjct: 97 -----ANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLES 151
Query: 509 GGWKT--VLTLVRNKANILLKD-INRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINL 565
+ L+ +I K+ +N L++
Sbjct: 152 NKIDLKILKLLIDKGVDINAKNRVNY------------------------------LLSY 181
Query: 566 GACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIA 619
G IN+K+ +PLH A VK LL + G+ N + G TPLHIA
Sbjct: 182 GVPINIKDVYGFTPLHYAVYNNNPEFVKYLL--DLGAN-PNLVNKYGDTPLHIA 232
Score = 65.8 bits (161), Expect = 2e-11
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 24/232 (10%)
Query: 155 LPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGA-----LDIVRLMFNLQ 209
LPL+ A + V++ L +GA I++ + STP+H + +IV+L+
Sbjct: 37 LPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYG 96
Query: 210 PSEKLVCLNSTDAQKMTPLHCAAMFDRCDV--VQYLIDEGADLNVLDKEKRSPLLLAASR 267
+N+ D +TPL A V+YL+D GA++N+ + + + L L
Sbjct: 97 -----ANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLES 151
Query: 268 GGWKTNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAA 327
+ I N+V LL + I +G T LH A
Sbjct: 152 NKIDLKILKLLIDKGVD------INAKNRVNYLLSY-----GVPINIKDVYGFTPLHYAV 200
Query: 328 IYDFDECARILVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESI 379
+ E + L+ D GA+ G P+H A N + + ++ L G SI
Sbjct: 201 YNNNPEFVKYLL-DLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSI 251
Score = 52.7 bits (127), Expect = 4e-07
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 43/192 (22%)
Query: 465 KMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANI 524
+ PL+ A DVV+ L+D GAD+N K +PL ++ K LT V+ +
Sbjct: 35 PVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNI---KYNLTDVKEIVKL 91
Query: 525 LLK---DINRRN-----ILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSN 576
LL+ ++N + L + + E L++ GA +N+KN+
Sbjct: 92 LLEYGANVNAPDNNGITPLLYAISKKSNSYS----------IVEYLLDNGANVNIKNSDG 141
Query: 577 ESPLHLAARYGRYNT--VKKLLSSERGSFI---------------INESDGEGLTPLHIA 619
E+ LHL + + +K L+ +G I IN D G TPLH A
Sbjct: 142 ENLLHLYLESNKIDLKILKLLID--KGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYA 199
Query: 620 SKEGFHYSVSIF 631
++ +
Sbjct: 200 V---YNNNPEFV 208
Score = 51.2 bits (123), Expect = 1e-06
Identities = 61/283 (21%), Positives = 111/283 (39%), Gaps = 44/283 (15%)
Query: 258 RSPLLLAASRGGWKTNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGE 317
+S ++ + K L+LA E + ++ ILL + DI +
Sbjct: 9 KSRIIKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILL--DNGADINSSTK 66
Query: 318 HGRTALHIAAIYDFD-----ECARILVKDFGASLKRACSNGYYPIHDAA--KNASSKTME 370
+ T LH + ++ E ++L++ +GA++ +NG P+ A K+ S +E
Sbjct: 67 NNSTPLHYLSNIKYNLTDVKEIVKLLLE-YGANVNAPDNNGITPLLYAISKKSNSYSIVE 125
Query: 371 VFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGG--DFKAVELCLKSGAKISTQQFDLS 428
L G ++ + +L LH + D K ++L + G I+
Sbjct: 126 YLLDNGANVNIKNSDGENL--------LHLYLESNKIDLKILKLLIDKGVDIN------- 170
Query: 429 TPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEG 488
A + V + V +N D TPLH A + + V+YL+D G
Sbjct: 171 ----------AKNRVNYLL-----SYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLG 215
Query: 489 ADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINR 531
A+ N+++K +PL +A + L+ N +I K I
Sbjct: 216 ANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSI--KTIIE 256
Score = 47.7 bits (114), Expect = 1e-05
Identities = 56/262 (21%), Positives = 102/262 (38%), Gaps = 43/262 (16%)
Query: 8 SDNKNKSRLIPSSSGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHG 67
K K+ K L+LA E + ++ ILL + DI ++
Sbjct: 11 RIIKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILL--DNGADINSSTKNN 68
Query: 68 RTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSNGYYPIHDAA--KNASS 125
T LH + ++ ++ E ++++ +GA++ +NG P+ A K+ S
Sbjct: 69 STPLHYLSNIKYNL------TDVKEIVKLLLE-YGANVNAPDNNGITPLLYAISKKSNSY 121
Query: 126 KTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGG--DFKAVELCLKSGAKISTQQ 183
+E L G ++ + +L LH + D K ++L + G I+
Sbjct: 122 SIVEYLLDNGANVNIKNSDGENL--------LHLYLESNKIDLKILKLLIDKGVDIN--- 170
Query: 184 FDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYL 243
A + V + V +N D TPLH A + + V+YL
Sbjct: 171 --------------AKNRVNYLL-----SYGVPINIKDVYGFTPLHYAVYNNNPEFVKYL 211
Query: 244 IDEGADLNVLDKEKRSPLLLAA 265
+D GA+ N+++K +PL +A
Sbjct: 212 LDLGANPNLVNKYGDTPLHIAI 233
Score = 39.3 bits (92), Expect = 0.005
Identities = 51/248 (20%), Positives = 93/248 (37%), Gaps = 35/248 (14%)
Query: 23 VNTRILNNKKQAVLHLATELNK---VPILLILLQYKDMIDILQGGEHGRTALHIAAIYDF 79
+N+ NN + N I+ +LL+Y ++ +G T L A
Sbjct: 61 INSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYG--ANVNAPDNNGITPLLYAISKKS 118
Query: 80 DECARILVSEQPECDWIMVKDF---GASLKRACSNGYYPIHDAAKN--ASSKTMEVFLQF 134
+ +V+ GA++ S+G +H ++ K +++ +
Sbjct: 119 -------------NSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKLLIDK 165
Query: 135 GESI-GCSREEM-------ISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDL 186
G I +R I++ D G PLH AV+ + + V+ L GA +
Sbjct: 166 GVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYG 225
Query: 187 STPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLH---CAAMFDRCDVVQYL 243
TP+H+A +I +L+ N PS K + + K L+ M + + +L
Sbjct: 226 DTPLHIAILNNNKEIFKLLLNNGPSIKTII-ETLLYFKDKDLNTITKIKMLKKSIMYMFL 284
Query: 244 IDEGADLN 251
+D G N
Sbjct: 285 LDPGFYKN 292
>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional.
Length = 682
Score = 72.0 bits (176), Expect = 4e-13
Identities = 91/396 (22%), Positives = 164/396 (41%), Gaps = 98/396 (24%)
Query: 115 PIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLK 174
PIH AA+ ++K + + L +G + +I+L + L AV + ++ +
Sbjct: 181 PIHYAAERGNAKMVNLLLSYGADV-----NIIAL---DDLSVLECAVDSKNIDTIKAIID 232
Query: 175 SGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMF 234
+ + I+ L A L+ L+++ S +NS D K TPLH A+
Sbjct: 233 NRSNINKNDLSLLK----AIRNEDLETSLLLYDAGFS-----VNSIDDCKNTPLHHASQA 283
Query: 235 DRCD-VVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTNGVNTRILNNKKQAVLHLATE 293
+V L++ GAD+N + + +PL L A + G+ T + T I+ L +
Sbjct: 284 PSLSRLVPKLLERGADVNAKNIKGETPLYLMA-KNGYDTENIRTLIM---------LGAD 333
Query: 294 LNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVKDFGASLKRACSNG 353
+N L I T LH A+ D ++ I + + GA++ +
Sbjct: 334 VNAADRLYI------------------TPLHQASTLDRNKDIVITLLELGANVN---ARD 372
Query: 354 YY---PIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGD-FKA 409
Y PIH AA + + L +G I +++ + LH A+ G + + +
Sbjct: 373 YCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTA--------LHFALCGTNPYMS 424
Query: 410 VELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPL 469
V+ + GA ++++ DLSTP+H AC + N +
Sbjct: 425 VKTLIDRGANVNSKNKDLSTPLHYACKK----------NCKL------------------ 456
Query: 470 HCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLA 505
DV++ L+D GAD+N ++ + + PLL+A
Sbjct: 457 ---------DVIEMLLDNGADVNAINIQNQYPLLIA 483
Score = 60.8 bits (147), Expect = 1e-09
Identities = 93/401 (23%), Positives = 163/401 (40%), Gaps = 67/401 (16%)
Query: 235 DRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTNGVNTRILNNKKQAVLHLATEL 294
D + + L++ GAD+N D +P+ AA RG N +++N +L ++
Sbjct: 156 DELLIAEMLLEGGADVNAKDIYCITPIHYAAERG-------NAKMVN----LLLSYGADV 204
Query: 295 NKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVKDFGASLKRACSNGY 354
N + + D + +L+ + I AI D R + SL +A N
Sbjct: 205 NIIAL--------DDLSVLECAVDSKNIDTIKAIID----NRSNINKNDLSLLKAIRN-- 250
Query: 355 YPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGDF-KAVELC 413
+ +E L ++ G S ++ N PLH A + V
Sbjct: 251 ------------EDLETSLLLYDA-GFS----VNSIDDCKNTPLHHASQAPSLSRLVPKL 293
Query: 414 LKSGAKISTQQFDLSTPVHLACSQG-ALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCA 472
L+ GA ++ + TP++L G + +R + L +N+ D +TPLH A
Sbjct: 294 LERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGAD-----VNAADRLYITPLHQA 348
Query: 473 AMFDRC-DVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINR 531
+ DR D+V L++ GA++N D ++P+ AA R + TL+ A+I
Sbjct: 349 STLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKI 408
Query: 532 RNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYG-RYN 590
LH + ++ + LI+ GA +N KN +PLH A + + +
Sbjct: 409 GTALHFALCGTNPYMSV-----------KTLIDRGANVNSKNKDLSTPLHYACKKNCKLD 457
Query: 591 TVKKLLSSERGSFIINESDGEGLTPLHIASKEGFHYSVSIF 631
++ LL + +N + + PL IA +H V+I
Sbjct: 458 VIEMLLDNGAD---VNAINIQNQYPLLIAL--EYHGIVNIL 493
Score = 55.5 bits (133), Expect = 7e-08
Identities = 87/379 (22%), Positives = 156/379 (41%), Gaps = 62/379 (16%)
Query: 212 EKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWK 271
E +N+ D +TP+H AA +V L+ GAD+N++ + S L A
Sbjct: 166 EGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECA------- 218
Query: 272 TNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDF 331
V+++ ++ K A++ + +NK + L + AI +
Sbjct: 219 ---VDSKNIDTIK-AIIDNRSNINKNDLSL-----------------------LKAIRNE 251
Query: 332 DECARILVKDFGASLKRACSNGYYPIHDAAKNAS-SKTMEVFLQFGESIGCSREEMISLF 390
D +L+ D G S+ P+H A++ S S+ + L+ G +
Sbjct: 252 DLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKN------- 304
Query: 391 AAEGNLPLH-SAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACS-QGALDIVRLMFN 448
+G PL+ A +G D + + + GA ++ TP+H A + DIV +
Sbjct: 305 -IKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLE 363
Query: 449 LQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLA-AS 507
L + +N+ D TP+H AA+ + ++ L+D GAD+ L ++ + L A
Sbjct: 364 LGAN-----VNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTALHFALCG 418
Query: 508 RGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGA 567
+ +V TL+ AN+ K+ + LH + + E L++ GA
Sbjct: 419 TNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKN-----------CKLDVIEMLLDNGA 467
Query: 568 CINLKNNSNESPLHLAARY 586
+N N N+ PL +A Y
Sbjct: 468 DVNAINIQNQYPLLIALEY 486
Score = 46.6 bits (110), Expect = 3e-05
Identities = 60/268 (22%), Positives = 110/268 (41%), Gaps = 30/268 (11%)
Query: 1 MGLLSVQSDNKNKSRLIPSSSGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDI 60
+ LL + ++ L+ +G + +++ K LH A++ + L+ L + D+
Sbjct: 242 LSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERG-ADV 300
Query: 61 LQGGEHGRTALHIAAIYDFD-ECARILVSEQPECDWIMVKDFGASLKRACSNGYYPIHDA 119
G T L++ A +D E R L+ GA + A P+H A
Sbjct: 301 NAKNIKGETPLYLMAKNGYDTENIRTLIM------------LGADVNAADRLYITPLHQA 348
Query: 120 AKNASSK-TMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAK 178
+ +K + L+ G ++ D P+H A + + L GA
Sbjct: 349 STLDRNKDIVITLLELGANVNAR--------DYCDKTPIHYAAVRNNVVIINTLLDYGAD 400
Query: 179 ISTQQFDLSTPVHLA-CSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFD-R 236
I + T +H A C V+ + ++ +NS + TPLH A + +
Sbjct: 401 IEALSQKIGTALHFALCGTNPYMSVKTLI-----DRGANVNSKNKDLSTPLHYACKKNCK 455
Query: 237 CDVVQYLIDEGADLNVLDKEKRSPLLLA 264
DV++ L+D GAD+N ++ + + PLL+A
Sbjct: 456 LDVIEMLLDNGADVNAINIQNQYPLLIA 483
Score = 30.4 bits (68), Expect = 3.2
Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 16/171 (9%)
Query: 429 TPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEG 488
T +H A +DIV + +Q + +L+ + TD + + LH + +V+ +I
Sbjct: 43 TAIHQALQLRQIDIVEEI--IQQNPELIYI--TDHKCHSTLHTICIIP--NVMDIVISLT 96
Query: 489 ADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKE 548
D +++ K + ++L + + +IL + I+ +I + + ++K
Sbjct: 97 LDCDIILDIKYASIILNKHKLDEACI--------HILKEAISGNDIHYDKINESIEYMKL 148
Query: 549 FAEEVAA--VFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLS 597
E + + + E L+ GA +N K+ +P+H AA G V LLS
Sbjct: 149 IKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLS 199
>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional.
Length = 413
Score = 64.2 bits (156), Expect = 8e-11
Identities = 52/174 (29%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
Query: 352 NGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGDFKAVE 411
+G PI A K S+ +++ ++ G ++ S LH AV GD KAVE
Sbjct: 34 DGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIES--------ELHDAVEEGDVKAVE 85
Query: 412 LCLKSGAKISTQQF-DLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLH 470
L G + D TP+HLA LDI++L+ + +TD K +PLH
Sbjct: 86 ELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDI---PNTD--KFSPLH 140
Query: 471 CAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANI 524
A M ++ LID A L++ D +PL++A ++G L+ + ANI
Sbjct: 141 LAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANI 194
Score = 55.0 bits (132), Expect = 7e-08
Identities = 41/187 (21%), Positives = 70/187 (37%), Gaps = 25/187 (13%)
Query: 356 PIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGDFKAVELCLK 415
+HDA + K +E L G+ +F +G PLH A ++L +
Sbjct: 71 ELHDAVEEGDVKAVEELLDLGKFAD-------DVFYKDGMTPLHLATILKKLDIMKLLIA 123
Query: 416 SGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMF 475
GA D +P+HLA G + + L+ + + CL+ D TPL A
Sbjct: 124 RGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHK-----ACLDIEDCCGCTPLIIAMAK 178
Query: 476 DRCDVVQYLIDEGADLNVLDKEKRSPLLLAA-------------SRGGWKTVLTLVRNKA 522
+ + L+D GA+++ K L A RG ++ ++ +
Sbjct: 179 GDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEE 238
Query: 523 NILLKDI 529
+L I
Sbjct: 239 CTILDMI 245
Score = 53.1 bits (127), Expect = 2e-07
Identities = 37/151 (24%), Positives = 60/151 (39%), Gaps = 12/151 (7%)
Query: 115 PIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLK 174
+HDA + K +E L G+ +F +G PLH A ++L +
Sbjct: 71 ELHDAVEEGDVKAVEELLDLGKFAD-------DVFYKDGMTPLHLATILKKLDIMKLLIA 123
Query: 175 SGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMF 234
GA D +P+HLA G + + L+ + + CL+ D TPL A
Sbjct: 124 RGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHK-----ACLDIEDCCGCTPLIIAMAK 178
Query: 235 DRCDVVQYLIDEGADLNVLDKEKRSPLLLAA 265
+ + L+D GA+++ K L A
Sbjct: 179 GDIAICKMLLDSGANIDYFGKNGCVAALCYA 209
Score = 50.0 bits (119), Expect = 2e-06
Identities = 40/136 (29%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Query: 393 EGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPS 452
+G P+ A+ D +A++L +K GA + D+ + +H A +G + V + +L
Sbjct: 34 DGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKF 93
Query: 453 EKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWK 512
V MTPLH A + + D+++ LI GAD ++ + +K SPL LA G K
Sbjct: 94 ADDVFYK----DGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIK 149
Query: 513 TVLTLVRNKANILLKD 528
+ L+ +KA + ++D
Sbjct: 150 GIELLIDHKACLDIED 165
Score = 46.1 bits (109), Expect = 4e-05
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 34/202 (16%)
Query: 152 EGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPS 211
+G P+ A+ D +A++L +K GA + D+ + +H A +G + V + +L
Sbjct: 34 DGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKF 93
Query: 212 EKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWK 271
V MTPLH A + + D+++ LI GAD ++ + +K SP
Sbjct: 94 ADDVFYK----DGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSP----------- 138
Query: 272 TNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDF 331
LHLA + + + +L+ +K +DI G T L IA
Sbjct: 139 ----------------LHLAVMMGDIKGIELLIDHKACLDIEDC--CGCTPLIIAMAKGD 180
Query: 332 DECARILVKDFGASLKRACSNG 353
++L+ D GA++ NG
Sbjct: 181 IAICKMLL-DSGANIDYFGKNG 201
Score = 40.4 bits (94), Expect = 0.003
Identities = 47/230 (20%), Positives = 83/230 (36%), Gaps = 41/230 (17%)
Query: 193 ACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNV 252
A G LDI R + ++ + N ++P+ A F + ++ L+ GA +V
Sbjct: 9 AILFGELDIARRLLDIGINP-----NFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDV 63
Query: 253 LDKEKRSPLLLAASRGGWK-------TNGVNTRILNNKKQAVLHLATELNKVPILLILLQ 305
+ S L A G K + LHLAT L K+ I+ +L+
Sbjct: 64 KYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIA 123
Query: 306 YKDMIDILQGGEHGRTALHIAAIYDFDECARILVKDFGASLKRACSN-----GYYPIHDA 360
DI + + LH+A + + +L+ +AC + G P+ A
Sbjct: 124 RGADPDIPNTDKF--SPLHLAVMMGDIKGIELLID------HKACLDIEDCCGCTPLIIA 175
Query: 361 AKNASSKTMEVFLQFGESI------GC----------SREEMISLFAAEG 394
++ L G +I GC ++ +++ LF G
Sbjct: 176 MAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRG 225
Score = 39.6 bits (92), Expect = 0.004
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 25/193 (12%)
Query: 434 ACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNV 493
A G LDI R + ++ + N ++P+ A F + ++ L+ GA +V
Sbjct: 9 AILFGELDIARRLLDIGINP-----NFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDV 63
Query: 494 LDKEKRSPLLLAASRGGWKTV---LTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFA 550
+ S L A G K V L L + ++ KD LHL A
Sbjct: 64 KYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGM--TPLHL------------A 109
Query: 551 EEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDG 610
+ + + + LI GA ++ N SPLHLA G ++ L+ + ++ D
Sbjct: 110 TILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKA---CLDIEDC 166
Query: 611 EGLTPLHIASKEG 623
G TPL IA +G
Sbjct: 167 CGCTPLIIAMAKG 179
Score = 39.6 bits (92), Expect = 0.005
Identities = 53/265 (20%), Positives = 99/265 (37%), Gaps = 43/265 (16%)
Query: 231 AAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTNGVNTRILNNKKQAVLHL 290
A +F D+ + L+D G + N + SP + L
Sbjct: 9 AILFGELDIARRLLDIGINPNFEIYDGISP---------------------------IKL 41
Query: 291 ATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVKDFGASLKRAC 350
A + + +L+++ + D+ + LH A+ + D A + D G
Sbjct: 42 AMKFRDSEAIKLLMKHGAIPDVKYPDI--ESELH-DAVEEGDVKAVEELLDLGKFADDVF 98
Query: 351 -SNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGDFKA 409
+G P+H A M++ + G + S PLH AV GD K
Sbjct: 99 YKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFS--------PLHLAVMMGDIKG 150
Query: 410 VELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPL 469
+EL + A + + TP+ +A ++G + I +++ + + N + L
Sbjct: 151 IELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGC----VAAL 206
Query: 470 HCAAMFDRCDVVQYLIDEGADLNVL 494
A ++ D+V+ I GAD N++
Sbjct: 207 CYAIENNKIDIVRLFIKRGADCNIM 231
>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction
only].
Length = 235
Score = 60.2 bits (145), Expect = 4e-10
Identities = 44/174 (25%), Positives = 63/174 (36%), Gaps = 40/174 (22%)
Query: 458 LNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTL 517
L + D PLH AA +V+ L+ GAD+N D + +PL LAA G
Sbjct: 66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNG-------- 117
Query: 518 VRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNE 577
+ LL+ G NL++
Sbjct: 118 --------NPPEGNIEVAKLLLEAGA---------------------DLDVNNLRDEDGN 148
Query: 578 SPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFHYSVSIF 631
+PLH AA G + V+ LL E G+ N + G+T L A+K G V +
Sbjct: 149 TPLHWAALNGDADIVELLL--EAGAD-PNSRNSYGVTALDPAAKNGRIELVKLL 199
Score = 54.1 bits (129), Expect = 4e-08
Identities = 43/162 (26%), Positives = 64/162 (39%), Gaps = 24/162 (14%)
Query: 217 LNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTNGVN 276
L + D PLH AA +V+ L+ GAD+N D + +PL LAA
Sbjct: 66 LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAA----------- 114
Query: 277 TRILNNKKQAVLHLATELNKVPILLILLQYKDMIDIL-QGGEHGRTALHIAAIYDFDECA 335
LN +L LL+ +D+ E G T LH AA+ +
Sbjct: 115 ---LNGNPPEGNIEVAKL--------LLEAGADLDVNNLRDEDGNTPLHWAALNGDADIV 163
Query: 336 RILVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGE 377
+L++ GA S G + AAKN + +++ L G
Sbjct: 164 ELLLE-AGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKGL 204
Score = 49.8 bits (118), Expect = 1e-06
Identities = 46/193 (23%), Positives = 78/193 (40%), Gaps = 12/193 (6%)
Query: 279 ILNNKKQAVLHLATELNKVPILLILLQYK-DMIDILQGGEHGRTALHIAAIYDFDECARI 337
+ K+ L+L L L LL + GR LH AA D+ ++
Sbjct: 32 SNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAARDLDGRLPLHSAASKGDDKIVKL 91
Query: 338 LVKDFGASLKRACSNGYYPIHDAAKNASSK-----TMEVFLQFGESIGCSREEMISLFAA 392
L+ GA + ++G P+H AA N + ++ L+ G + +
Sbjct: 92 LL-ASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRD-----E 145
Query: 393 EGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPS 452
+GN PLH A GD VEL L++GA +++ T + A G +++V+L+ +
Sbjct: 146 DGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLH 205
Query: 453 EKLVCLNSTDAQK 465
L+ N
Sbjct: 206 LSLLKFNLEGVAN 218
Score = 48.3 bits (114), Expect = 4e-06
Identities = 50/219 (22%), Positives = 90/219 (41%), Gaps = 25/219 (11%)
Query: 14 SRLIPSSSGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMID---ILQGGEHGRTA 70
L+ + + + L+N L+L EL +P + +I + GR
Sbjct: 17 DLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAARDLDGRLP 76
Query: 71 LHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACSNGYYPIHDAAKNASSK---- 126
LH AA D+ ++L+ GA + ++G P+H AA N +
Sbjct: 77 LHSAASKGDDKIVKLLL------------ASGADVNAKDADGDTPLHLAALNGNPPEGNI 124
Query: 127 -TMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFD 185
++ L+ G + ++ +L D +GN PLH A GD VEL L++GA +++
Sbjct: 125 EVAKLLLEAG-----ADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSY 179
Query: 186 LSTPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQK 224
T + A G +++V+L+ + L+ N
Sbjct: 180 GVTALDPAAKNGRIELVKLLLDKGLHLSLLKFNLEGVAN 218
>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional.
Length = 477
Score = 56.0 bits (135), Expect = 3e-08
Identities = 67/306 (21%), Positives = 119/306 (38%), Gaps = 47/306 (15%)
Query: 218 NSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTNGVNT 277
S PLH A DVV+ L+ G ++N D +PL +
Sbjct: 31 TSASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICK----------- 79
Query: 278 RILNNKKQAVLHLATELNKVPILLILLQYKDMID---------ILQGGEHGRTALHIAAI 328
K + + +NK + L+ KD + IL + + I
Sbjct: 80 ---EPNKLGMKEMIRSINKCSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYI 136
Query: 329 YDFDECARI------LVKDFGASLKRACSN-GYYPIHDAAKNASSKTMEVFLQFGESIGC 381
+ I L+ +GA + + G +H A +N + E+ L +G ++
Sbjct: 137 DKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANV-- 194
Query: 382 SREEMISLFAAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQ-GAL 440
++ N PLH AV + V + L++GA + +TP+H++
Sbjct: 195 ------NIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDY 248
Query: 441 DIVRLMFNLQPSEKLVCLNSTDA-QKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKR 499
DI++L+ E V +N+ +T LH + +R ++ L++ GAD+N L+ K
Sbjct: 249 DILKLLL-----EHGVDVNAKSYILGLTALHSSIKSER--KLKLLLEYGADINSLNSYKL 301
Query: 500 SPLLLA 505
+PL A
Sbjct: 302 TPLSSA 307
Score = 55.7 bits (134), Expect = 4e-08
Identities = 57/255 (22%), Positives = 101/255 (39%), Gaps = 42/255 (16%)
Query: 396 LPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACS----QGALDIVRL------ 445
+PLH AV + V+ L G ++ TP+H+ C G +++R
Sbjct: 39 IPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV 98
Query: 446 ---------MFNLQPSE--KLVCLNSTDAQKMTPLHCAAMFDRCD-----VVQYLIDEGA 489
FN + E K++ N + L + D + + L+ GA
Sbjct: 99 FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGA 158
Query: 490 DLNVLDKEK-RSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKE 548
D+N+ D+ K + L A + L+ AN+ + D + LH +K
Sbjct: 159 DINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLH-------HAVKH 211
Query: 549 FAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGR-YNTVKKLLSSERGSFIINE 607
+ + + L+ GA + ++ +PLH++ Y + Y+ +K LL E G + +
Sbjct: 212 YNKPIV-----HILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLL--EHGVDVNAK 264
Query: 608 SDGEGLTPLHIASKE 622
S GLT LH + K
Sbjct: 265 SYILGLTALHSSIKS 279
Score = 54.9 bits (132), Expect = 8e-08
Identities = 44/199 (22%), Positives = 80/199 (40%), Gaps = 21/199 (10%)
Query: 441 DIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRS 500
+I +L+ + + + + T LH A + + L+ GA++N+ DK S
Sbjct: 148 EITKLLLSYGADINMKDRHKGN----TALHYATENKDQRLTELLLSYGANVNIPDKTNNS 203
Query: 501 PLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGE 560
PL A V L+ N A+ +D LH+ V G+ K++ ++ +
Sbjct: 204 PLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISV----GYCKDY--DILKL---- 253
Query: 561 NLINLGACINLKNN-SNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIA 619
L+ G +N K+ + LH + + R KLL IN + LTPL A
Sbjct: 254 -LLEHGVDVNAKSYILGLTALHSSIKSER---KLKLLLEYGAD--INSLNSYKLTPLSSA 307
Query: 620 SKEGFHYSVSIFQVTYVWC 638
K+ ++ ++ +
Sbjct: 308 VKQYLCINIGRILISNICL 326
Score = 54.9 bits (132), Expect = 8e-08
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 18/167 (10%)
Query: 101 FGASLKRACSN-GYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHS 159
+GA + + G +H A +N + E+ L +G ++ ++ D N PLH
Sbjct: 156 YGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANV--------NIPDKTNNSPLHH 207
Query: 160 AVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQ-GALDIVRLMFNLQPSEKLVCLN 218
AV + V + L++GA + +TP+H++ DI++L+ E V +N
Sbjct: 208 AVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLL-----EHGVDVN 262
Query: 219 STDA-QKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLA 264
+ +T LH + +R ++ L++ GAD+N L+ K +PL A
Sbjct: 263 AKSYILGLTALHSSIKSER--KLKLLLEYGADINSLNSYKLTPLSSA 307
Score = 50.6 bits (121), Expect = 2e-06
Identities = 58/259 (22%), Positives = 100/259 (38%), Gaps = 38/259 (14%)
Query: 155 LPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACS----QGALDIVRL------ 204
+PLH AV + V+ L G ++ TP+H+ C G +++R
Sbjct: 39 IPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV 98
Query: 205 ---------MFNLQPSE--KLVCLNSTDAQKMTPLHCAAMFDRCD-----VVQYLIDEGA 248
FN + E K++ N + L + D + + L+ GA
Sbjct: 99 FYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGA 158
Query: 249 DLNVLDKEK-RSPLLLAASRGGWK------TNGVNTRILNNKKQAVLHLATELNKVPILL 301
D+N+ D+ K + L A + + G N I + + LH A + PI+
Sbjct: 159 DINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVH 218
Query: 302 ILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVKDFGASLKRACS-NGYYPIHDA 360
ILL+ D + G T LHI+ Y D L+ + G + G +H +
Sbjct: 219 ILLENGASTDARD--KCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS 276
Query: 361 AKNASSKTMEVFLQFGESI 379
K S + +++ L++G I
Sbjct: 277 IK--SERKLKLLLEYGADI 293
Score = 29.8 bits (67), Expect = 4.3
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 8 SDNKNK--SRLIPSSSGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGE 65
++NK++ + L+ S G N I + + LH A + PI+ ILL+ D +
Sbjct: 176 TENKDQRLTELL-LSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARD--K 232
Query: 66 HGRTALHIAAIY 77
G T LHI+ Y
Sbjct: 233 CGNTPLHISVGY 244
>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies).
Length = 56
Score = 48.5 bits (116), Expect = 1e-07
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 217 LNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLA 264
LN+TD TPLH AA + ++VQ+L+ G DLN+ D + + L LA
Sbjct: 9 LNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56
Score = 48.5 bits (116), Expect = 1e-07
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 458 LNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLA 505
LN+TD TPLH AA + ++VQ+L+ G DLN+ D + + L LA
Sbjct: 9 LNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56
Score = 39.6 bits (93), Expect = 1e-04
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 562 LINLGAC-INLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIA 619
L+ G +N + + +PLHLAA+YG V+ LL +N D +GLT L +A
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVD---LNLRDSDGLTALDLA 56
Score = 36.6 bits (85), Expect = 0.002
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 150 DAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLA 193
D GN PLH A G + V+ LK G ++ + D T + LA
Sbjct: 13 DGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56
Score = 35.8 bits (83), Expect = 0.004
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 393 EGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLA 434
GN PLH A G + V+ LK G ++ + D T + LA
Sbjct: 15 NGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56
Score = 34.6 bits (80), Expect = 0.010
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 187 STPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCA 231
+TP+HLA GAL++V+ + V LN D+ +T L A
Sbjct: 17 NTPLHLAAKYGALELVQWLLKPG-----VDLNLRDSDGLTALDLA 56
Score = 34.6 bits (80), Expect = 0.010
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 428 STPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCA 472
+TP+HLA GAL++V+ + V LN D+ +T L A
Sbjct: 17 NTPLHLAAKYGALELVQWLLKPG-----VDLNLRDSDGLTALDLA 56
Score = 31.6 bits (72), Expect = 0.099
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 303 LLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVKDFGASLKRACSNGYYPIH 358
LL++ ID+ +G T LH+AA Y E + L+K G L S+G +
Sbjct: 1 LLEHGP-IDLNATDGNGNTPLHLAAKYGALELVQWLLK-PGVDLNLRDSDGLTALD 54
Score = 31.6 bits (72), Expect = 0.12
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 484 LIDEG-ADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHL 537
L++ G DLN D +PL LAA G + V L++ ++ L+D + L L
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDL 55
Score = 30.4 bits (69), Expect = 0.30
Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 270 WKTNGVNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIA 326
+ ++ + LHLA + + ++ LL+ +D+ G TAL +A
Sbjct: 2 LEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPG--VDLNLRDSDGLTALDLA 56
Score = 29.6 bits (67), Expect = 0.59
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 12/67 (17%)
Query: 517 LVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSN 576
L ++ D N LHL G E V + L+ G +NL+++
Sbjct: 2 LEHGPIDLNATDGNGNTPLHLAAKYG------ALELV------QWLLKPGVDLNLRDSDG 49
Query: 577 ESPLHLA 583
+ L LA
Sbjct: 50 LTALDLA 56
Score = 29.2 bits (66), Expect = 0.63
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 51 LLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASL 105
LL++ ID+ +G T LH+AA Y E + L+ +P D + G +
Sbjct: 1 LLEHGP-IDLNATDGNGNTPLHLAAKYGALELVQWLL--KPGVDLNLRDSDGLTA 52
Score = 29.2 bits (66), Expect = 0.64
Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 23 VNTRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIA 74
++ + LHLA + + ++ LL+ +D+ G TAL +A
Sbjct: 7 IDLNATDGNGNTPLHLAAKYGALELVQWLLKPG--VDLNLRDSDGLTALDLA 56
Score = 28.1 bits (63), Expect = 1.6
Identities = 11/54 (20%), Positives = 24/54 (44%)
Query: 97 MVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFD 150
+++ L NG P+H AAK + + ++ L+ G + + ++ D
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALD 54
Score = 28.1 bits (63), Expect = 1.7
Identities = 11/49 (22%), Positives = 21/49 (42%)
Query: 338 LVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEM 386
L++ L NG P+H AAK + + ++ L+ G + +
Sbjct: 1 LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDG 49
>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies).
Length = 54
Score = 47.2 bits (113), Expect = 3e-07
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 188 TPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLI 244
T +H A G L++V+ + EK V +N TD T LH AA +V++ L+
Sbjct: 3 TALHKAAISGRLELVKYLL-----EKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 47.2 bits (113), Expect = 3e-07
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Query: 429 TPVHLACSQGALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLI 485
T +H A G L++V+ + EK V +N TD T LH AA +V++ L+
Sbjct: 3 TALHKAAISGRLELVKYLL-----EKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 45.3 bits (108), Expect = 1e-06
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 225 MTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRG 268
T LH AA+ R ++V+YL+++G D+N D++ + L +AA G
Sbjct: 2 RTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENG 45
Score = 45.3 bits (108), Expect = 1e-06
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 466 MTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRG 509
T LH AA+ R ++V+YL+++G D+N D++ + L +AA G
Sbjct: 2 RTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENG 45
Score = 40.3 bits (95), Expect = 9e-05
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 578 SPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFHYSV 628
+ LH AA GR VK LL IN +D +G T LHIA++ G + V
Sbjct: 3 TALHKAAISGRLELVKYLLEK---GVDINRTDEDGNTALHIAAENG-NLEV 49
Score = 38.4 bits (90), Expect = 4e-04
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 562 LINLGACINLKNNSNESPLHLAARYGRYNTVKKLL 596
L+ G IN + + LH+AA G +K LL
Sbjct: 20 LLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 37.6 bits (88), Expect = 7e-04
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 153 GNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRL 204
G LH A G + V+ L+ G I+ D +T +H+A G L++++L
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKL 52
Score = 37.6 bits (88), Expect = 7e-04
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 394 GNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRL 445
G LH A G + V+ L+ G I+ D +T +H+A G L++++L
Sbjct: 1 GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKL 52
Score = 33.0 bits (76), Expect = 0.033
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 115 PIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVEL 171
+H AA + + ++ L+ G I + D +GN LH A G+ + ++L
Sbjct: 4 ALHKAAISGRLELVKYLLEKGVDINRT--------DEDGNTALHIAAENGNLEVLKL 52
Score = 31.1 bits (71), Expect = 0.17
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 35 VLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILV 87
LH A ++ ++ LL+ +DI + E G TALHIAA E ++L+
Sbjct: 4 ALHKAAISGRLELVKYLLEKG--VDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 31.1 bits (71), Expect = 0.17
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 287 VLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILV 339
LH A ++ ++ LL+ +DI + E G TALHIAA E ++L+
Sbjct: 4 ALHKAAISGRLELVKYLLEKG--VDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 30.7 bits (70), Expect = 0.20
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 356 PIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGDFKAVEL 412
+H AA + + ++ L+ G I + E+ GN LH A G+ + ++L
Sbjct: 4 ALHKAAISGRLELVKYLLEKGVDINRTDED--------GNTALHIAAENGNLEVLKL 52
Score = 29.1 bits (66), Expect = 0.68
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 319 GRTALHIAAIYDFDECARILVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFL 373
GRTALH AAI E + L+ + G + R +G +H AA+N + + +++ L
Sbjct: 1 GRTALHKAAISGRLELVKYLL-EKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54
Score = 28.7 bits (65), Expect = 1.1
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 499 RSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNG 542
R+ L AA G + V L+ +I D + LH+ NG
Sbjct: 2 RTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENG 45
>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat. Ankyrins are multifunctional
adaptors that link specific proteins to the
membrane-associated, spectrin- actin cytoskeleton. This
repeat-domain is a 'membrane-binding' domain of up to 24
repeated units, and it mediates most of the protein's
binding activities. Repeats 13-24 are especially active,
with known sites of interaction for the Na/K ATPase,
Cl/HCO(3) anion exchanger, voltage-gated sodium channel,
clathrin heavy chain and L1 family cell adhesion
molecules. The ANK repeats are found to form a
contiguous spiral stack such that ion transporters like
the anion exchanger associate in a large central cavity
formed by the ANK repeat spiral, while clathrin and cell
adhesion molecules associate with specific regions
outside this cavity.
Length = 33
Score = 42.9 bits (102), Expect = 6e-06
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 225 MTPLHCAAMFDRCDVVQYLIDEGADLNVLDK 255
TPLH AA +VV+ L++ GAD+N DK
Sbjct: 3 NTPLHLAARNGHLEVVKLLLEAGADVNARDK 33
Score = 42.9 bits (102), Expect = 6e-06
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 466 MTPLHCAAMFDRCDVVQYLIDEGADLNVLDK 496
TPLH AA +VV+ L++ GAD+N DK
Sbjct: 3 NTPLHLAARNGHLEVVKLLLEAGADVNARDK 33
Score = 34.1 bits (79), Expect = 0.009
Identities = 10/29 (34%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 318 HGRTALHIAAIYDFDECARILVKDFGASL 346
G T LH+AA E ++L+ + GA +
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLL-EAGADV 28
Score = 32.5 bits (75), Expect = 0.025
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 66 HGRTALHIAAIYDFDECARILVS 88
G T LH+AA E ++L+
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLLE 23
Score = 31.4 bits (72), Expect = 0.078
Identities = 12/21 (57%), Positives = 13/21 (61%)
Query: 577 ESPLHLAARYGRYNTVKKLLS 597
+PLHLAAR G VK LL
Sbjct: 3 NTPLHLAARNGHLEVVKLLLE 23
Score = 30.6 bits (70), Expect = 0.14
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 152 EGNLPLHSAVHGGDFKAVELCLKSGAKI 179
+GN PLH A G + V+L L++GA +
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLLEAGADV 28
Score = 30.6 bits (70), Expect = 0.14
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 393 EGNLPLHSAVHGGDFKAVELCLKSGAKI 420
+GN PLH A G + V+L L++GA +
Sbjct: 1 DGNTPLHLAARNGHLEVVKLLLEAGADV 28
Score = 26.7 bits (60), Expect = 2.9
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 499 RSPLLLAASRGGWKTVLTLVRNKANILLKD 528
+PL LAA G + V L+ A++ +D
Sbjct: 3 NTPLHLAARNGHLEVVKLLLEAGADVNARD 32
Score = 26.7 bits (60), Expect = 3.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 188 TPVHLACSQGALDIVRLM 205
TP+HLA G L++V+L+
Sbjct: 4 TPLHLAARNGHLEVVKLL 21
Score = 26.7 bits (60), Expect = 3.4
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 429 TPVHLACSQGALDIVRLM 446
TP+HLA G L++V+L+
Sbjct: 4 TPLHLAARNGHLEVVKLL 21
>gnl|CDD|140343 PTZ00322, PTZ00322,
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase;
Provisional.
Length = 664
Score = 47.6 bits (113), Expect = 2e-05
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 164 GDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLM--FNLQPSEKLVCLNSTD 221
GD + L GA + + +D TP+H+AC+ G + +VR++ F P+ D
Sbjct: 93 GDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPT-------LLD 145
Query: 222 AQKMTPLHCAAMFDRCDVVQYL 243
TPL A +VVQ L
Sbjct: 146 KDGKTPLELAEENGFREVVQLL 167
Score = 47.6 bits (113), Expect = 2e-05
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 405 GDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLM--FNLQPSEKLVCLNSTD 462
GD + L GA + + +D TP+H+AC+ G + +VR++ F P+ D
Sbjct: 93 GDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPT-------LLD 145
Query: 463 AQKMTPLHCAAMFDRCDVVQYL 484
TPL A +VVQ L
Sbjct: 146 KDGKTPLELAEENGFREVVQLL 167
Score = 45.7 bits (108), Expect = 8e-05
Identities = 24/61 (39%), Positives = 32/61 (52%)
Query: 459 NSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLV 518
N D TPLH A VV+ L++ GAD +LDK+ ++PL LA G + V L
Sbjct: 109 NCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLS 168
Query: 519 R 519
R
Sbjct: 169 R 169
Score = 44.9 bits (106), Expect = 1e-04
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 218 NSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRG 268
N D TPLH A VV+ L++ GAD +LDK+ ++PL LA G
Sbjct: 109 NCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENG 159
Score = 33.3 bits (76), Expect = 0.48
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 150 DAEGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLM 205
D +G PLH A G + V + L+ GA + D TP+ LA G ++V+L+
Sbjct: 112 DYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLL 167
Score = 31.4 bits (71), Expect = 1.6
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 393 EGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLM 446
+G PLH A G + V + L+ GA + D TP+ LA G ++V+L+
Sbjct: 114 DGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLL 167
Score = 31.0 bits (70), Expect = 2.0
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 562 LINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASK 621
L+ GA N ++ +PLH+A G V+ LL E G+ D +G TPL +A +
Sbjct: 101 LLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLL--EFGA-DPTLLDKDGKTPLELAEE 157
Query: 622 EGF 624
GF
Sbjct: 158 NGF 160
Score = 30.3 bits (68), Expect = 3.8
Identities = 20/68 (29%), Positives = 33/68 (48%)
Query: 481 VQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVL 540
+ L+ GAD N D + R+PL +A + G + V L+ A+ L D + + L L
Sbjct: 98 ARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEE 157
Query: 541 NGGGHIKE 548
NG + +
Sbjct: 158 NGFREVVQ 165
Score = 30.3 bits (68), Expect = 4.2
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 20/92 (21%)
Query: 83 ARILVSEQPECDWIMVKDFGASLKRACSNGYYPIHDAAKNASSKTMEVFLQFGESIGCSR 142
ARIL++ + + +D+ +G P+H A N + + V L+FG
Sbjct: 98 ARILLTGGADPN---CRDY---------DGRTPLHIACANGHVQVVRVLLEFGADP---- 141
Query: 143 EEMISLFDAEGNLPLHSAVHGGDFKAVELCLK 174
+L D +G PL A G + V+L +
Sbjct: 142 ----TLLDKDGKTPLELAEENGFREVVQLLSR 169
>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel;
Provisional.
Length = 823
Score = 45.6 bits (108), Expect = 7e-05
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 25/150 (16%)
Query: 303 LLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVKDFGASLKRACS------NGYYP 356
LL+ K DI G GRT LHIAA +++C +L LK AC+ NG
Sbjct: 544 LLKAKLDPDI--GDSKGRTPLHIAASKGYEDCVLVL-------LKHACNVHIRDANGNTA 594
Query: 357 IHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGDFKAVELCLKS 416
+ +A K + F IS A G+L L +A D A++ LK
Sbjct: 595 LWNAISAKHHKIFRILYHFAS---------ISDPHAAGDL-LCTAAKRNDLTAMKELLKQ 644
Query: 417 GAKISTQQFDLSTPVHLACSQGALDIVRLM 446
G + ++ +T + +A ++ +D+VRL+
Sbjct: 645 GLNVDSEDHQGATALQVAMAEDHVDMVRLL 674
Score = 41.8 bits (98), Expect = 0.001
Identities = 43/161 (26%), Positives = 67/161 (41%), Gaps = 36/161 (22%)
Query: 51 LLQYKDMIDILQGGEHGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLKRACS 110
LL+ K DI G GRT LHIAA +++C +L LK AC+
Sbjct: 544 LLKAKLDPDI--GDSKGRTPLHIAASKGYEDCVLVL------------------LKHACN 583
Query: 111 ------NGYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGG 164
NG + +A K + F IS A G+L L +A
Sbjct: 584 VHIRDANGNTALWNAISAKHHKIFRILYHFAS---------ISDPHAAGDL-LCTAAKRN 633
Query: 165 DFKAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLM 205
D A++ LK G + ++ +T + +A ++ +D+VRL+
Sbjct: 634 DLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLL 674
Score = 39.5 bits (92), Expect = 0.007
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 17/140 (12%)
Query: 484 LIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGG 543
L+ D ++ D + R+PL +AAS+G VL L+++ N+ ++D N L +
Sbjct: 544 LLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAI--SA 601
Query: 544 GHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRYNTVKKLLSSERGSF 603
H K F ++ A I+ + + + L AA+ +K+LL +
Sbjct: 602 KHHKIF-----------RILYHFASISDPHAAGDL-LCTAAKRNDLTAMKELL---KQGL 646
Query: 604 IINESDGEGLTPLHIASKEG 623
++ D +G T L +A E
Sbjct: 647 NVDSEDHQGATALQVAMAED 666
Score = 36.8 bits (85), Expect = 0.036
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 15/138 (10%)
Query: 220 TDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTNGVNTRI 279
D++ TPLH AA D V L+ ++++ D + L A S K RI
Sbjct: 554 GDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKI----FRI 609
Query: 280 LNNKKQA--------VLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALHIAAIYDF 331
L + +L A + N + + LL K +++ G TAL +A D
Sbjct: 610 LYHFASISDPHAAGDLLCTAAKRNDLTAMKELL--KQGLNVDSEDHQGATALQVAMAEDH 667
Query: 332 DECARILVKDFGASLKRA 349
+ R+L+ + GA + +A
Sbjct: 668 VDMVRLLIMN-GADVDKA 684
>gnl|CDD|197603 smart00248, ANK, ankyrin repeats. Ankyrin repeats are about 33
amino acids long and occur in at least four consecutive
copies. They are involved in protein-protein
interactions. The core of the repeat seems to be an
helix-loop-helix structure.
Length = 30
Score = 38.7 bits (91), Expect = 2e-04
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 223 QKMTPLHCAAMFDRCDVVQYLIDEGADLNV 252
TPLH AA +VV+ L+D+GAD+N
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
Score = 38.7 bits (91), Expect = 2e-04
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 464 QKMTPLHCAAMFDRCDVVQYLIDEGADLNV 493
TPLH AA +VV+ L+D+GAD+N
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGADINA 30
Score = 30.6 bits (70), Expect = 0.12
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 66 HGRTALHIAAIYDFDECARILVSEQPECD 94
GRT LH+AA E ++L+ + + +
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGADIN 29
Score = 29.1 bits (66), Expect = 0.49
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 318 HGRTALHIAAIYDFDECARILVK 340
GRT LH+AA E ++L+
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLD 23
Score = 28.7 bits (65), Expect = 0.64
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 576 NESPLHLAARYGRYNTVKKLLSS 598
+PLHLAA G VK LL
Sbjct: 2 GRTPLHLAAENGNLEVVKLLLDK 24
Score = 27.9 bits (63), Expect = 0.99
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 152 EGNLPLHSAVHGGDFKAVELCLKSGAKI 179
+G PLH A G+ + V+L L GA I
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGADI 28
Score = 27.9 bits (63), Expect = 0.99
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 393 EGNLPLHSAVHGGDFKAVELCLKSGAKI 420
+G PLH A G+ + V+L L GA I
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGADI 28
Score = 27.2 bits (61), Expect = 2.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 185 DLSTPVHLACSQGALDIVRLMFNLQPS 211
D TP+HLA G L++V+L+ +
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGAD 27
Score = 27.2 bits (61), Expect = 2.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 426 DLSTPVHLACSQGALDIVRLMFNLQPS 452
D TP+HLA G L++V+L+ +
Sbjct: 1 DGRTPLHLAAENGNLEVVKLLLDKGAD 27
>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat. Ankyrins are multifunctional
adaptors that link specific proteins to the
membrane-associated, spectrin- actin cytoskeleton. This
repeat-domain is a 'membrane-binding' domain of up to 24
repeated units, and it mediates most of the protein's
binding activities.
Length = 30
Score = 36.5 bits (85), Expect = 0.001
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 225 MTPLHCAAMFDRCDVVQYLIDEGADLNV 252
TPLH AA ++V+ L++ GAD+N
Sbjct: 3 NTPLHLAARNGNLELVKLLLEHGADINA 30
Score = 36.5 bits (85), Expect = 0.001
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 466 MTPLHCAAMFDRCDVVQYLIDEGADLNV 493
TPLH AA ++V+ L++ GAD+N
Sbjct: 3 NTPLHLAARNGNLELVKLLLEHGADINA 30
Score = 29.5 bits (67), Expect = 0.27
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 152 EGNLPLHSAVHGGDFKAVELCLKSGAKIST 181
+GN PLH A G+ + V+L L+ GA I+
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLEHGADINA 30
Score = 29.5 bits (67), Expect = 0.27
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 393 EGNLPLHSAVHGGDFKAVELCLKSGAKIST 422
+GN PLH A G+ + V+L L+ GA I+
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLEHGADINA 30
Score = 28.4 bits (64), Expect = 0.90
Identities = 12/22 (54%), Positives = 13/22 (59%)
Query: 576 NESPLHLAARYGRYNTVKKLLS 597
+PLHLAAR G VK LL
Sbjct: 2 GNTPLHLAARNGNLELVKLLLE 23
Score = 27.2 bits (61), Expect = 2.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 318 HGRTALHIAAIYDFDECARILVK 340
G T LH+AA E ++L++
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLE 23
Score = 26.4 bits (59), Expect = 3.5
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 66 HGRTALHIAAIYDFDECARILVS 88
G T LH+AA E ++L+
Sbjct: 1 DGNTPLHLAARNGNLELVKLLLE 23
>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional.
Length = 489
Score = 38.3 bits (89), Expect = 0.010
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Query: 479 DVVQYLIDEGADLNVLDKEKRSPL-LLAASRGGWKT----VLTLVRNKANILLKDINRRN 533
D+V+ I+ GA++N LD E +PL + ++ +K V L+ N A+I K+ +
Sbjct: 52 DIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGET 111
Query: 534 ILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSNESPLHLAARYGRY---N 590
L+ L+ NG + E +F+ EN GA L + + L + + +
Sbjct: 112 PLYCLLSNGYINNLEI-----LLFMIEN----GADTTLLDKDGFTMLQVYLQSNHHIDIE 162
Query: 591 TVKKLLSSERGSFIINESDGEGLTPLH 617
+K LL E+G I ++ E LH
Sbjct: 163 IIKLLL--EKGVDINTHNNKEKYDTLH 187
Score = 37.5 bits (87), Expect = 0.018
Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 23/152 (15%)
Query: 198 ALDIVRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAMFD------RCDVVQYLIDEGADLN 251
+ DIV+L NL + +N D + TPL C + + D+V+ LI+ GAD+N
Sbjct: 50 STDIVKLFINLGAN-----VNGLDNEYSTPL-CTILSNIKDYKHMLDIVKILIENGADIN 103
Query: 252 VLDKEKRSPLLLAASRGGWKT---------NGVNTRILNNKKQAVLHLATELN-KVPILL 301
+ + +PL S G NG +T +L+ +L + + N + I +
Sbjct: 104 KKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEI 163
Query: 302 ILLQYKDMIDILQ-GGEHGRTALHIAAIYDFD 332
I L + +DI + LH Y+ D
Sbjct: 164 IKLLLEKGVDINTHNNKEKYDTLHCYFKYNID 195
Score = 35.6 bits (82), Expect = 0.087
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 166 FKAVELCLKSGAKISTQQFDLSTPVHLACS-----QGALDIVRLMFNLQPSEKLVCLNST 220
V+L + GA ++ + STP+ S + LDIV+++ E +N
Sbjct: 51 TDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILI-----ENGADINKK 105
Query: 221 DAQKMTPLHCA---AMFDRCDVVQYLIDEGADLNVLDK 255
++ TPL+C + +++ ++I+ GAD +LDK
Sbjct: 106 NSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDK 143
Score = 35.6 bits (82), Expect = 0.087
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 407 FKAVELCLKSGAKISTQQFDLSTPVHLACS-----QGALDIVRLMFNLQPSEKLVCLNST 461
V+L + GA ++ + STP+ S + LDIV+++ E +N
Sbjct: 51 TDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILI-----ENGADINKK 105
Query: 462 DAQKMTPLHCA---AMFDRCDVVQYLIDEGADLNVLDK 496
++ TPL+C + +++ ++I+ GAD +LDK
Sbjct: 106 NSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDK 143
>gnl|CDD|165154 PHA02791, PHA02791, ankyrin-like protein; Provisional.
Length = 284
Score = 37.7 bits (87), Expect = 0.014
Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 14/168 (8%)
Query: 468 PLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILL- 526
PLH AA + +V+ L+ G D + D + + L A G +TV V+ ++
Sbjct: 64 PLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFY 123
Query: 527 -KDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGACIN--LKNNSNESPLHLA 583
K + + H ++LN + F E+ + F +L L +CI+ +KN + + L
Sbjct: 124 GKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF---DLAILLSCIHITIKNGHVDMMILLL 180
Query: 584 ARYGRYNTVKKLLSSERGSFIINESDGEGLTPLHIASKEGFHYSVSIF 631
NT LL I+ D E L L F Y ++I+
Sbjct: 181 DYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQAL-------FKYDINIY 221
Score = 30.0 bits (67), Expect = 3.8
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 152 EGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDL--STPVHLACSQGALDIVRLMFNLQ 209
E PLH A D K V++ L SG + QFD +T ++ A G + V+L ++
Sbjct: 60 ENEFPLHQAATLEDTKIVKILLFSG--MDDSQFDDKGNTALYYAVDSGNMQTVKLF--VK 115
Query: 210 PSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDE 246
+ +L+ T + T + A M + +V Y + E
Sbjct: 116 KNWRLMFYGKTGWK--TSFYHAVMLNDVSIVSYFLSE 150
Score = 30.0 bits (67), Expect = 3.8
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 393 EGNLPLHSAVHGGDFKAVELCLKSGAKISTQQFDL--STPVHLACSQGALDIVRLMFNLQ 450
E PLH A D K V++ L SG + QFD +T ++ A G + V+L ++
Sbjct: 60 ENEFPLHQAATLEDTKIVKILLFSG--MDDSQFDDKGNTALYYAVDSGNMQTVKLF--VK 115
Query: 451 PSEKLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDE 487
+ +L+ T + T + A M + +V Y + E
Sbjct: 116 KNWRLMFYGKTGWK--TSFYHAVMLNDVSIVSYFLSE 150
Score = 30.0 bits (67), Expect = 4.0
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 114 YPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAVELCL 173
+P+H AA +K +++ L G S FD +GN L+ AV G+ + V+L +
Sbjct: 63 FPLHQAATLEDTKIVKILLFSGMDD--------SQFDDKGNTALYYAVDSGNMQTVKLFV 114
Query: 174 KSGAKI 179
K ++
Sbjct: 115 KKNWRL 120
>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel
protein. The Transient Receptor Potential Ca2+ Channel
(TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also
been called the store-operated calcium channel (SOC)
family. The prototypical members include the Drosophila
retinal proteinsTRP and TRPL (Montell and Rubin, 1989;
Hardie and Minke, 1993). SOC members of the family
mediate the entry of extracellular Ca2+ into cells in
responseto depletion of intracellular Ca2+ stores
(Clapham, 1996) and agonist stimulated production of
inositol-1,4,5 trisphosphate (IP3). One member of the
TRP-CCfamily, mammalian Htrp3, has been shown to form a
tight complex with the IP3 receptor (TC #1.A.3.2.1).
This interaction is apparently required for IP3
tostimulate Ca2+ release via Htrp3. The vanilloid
receptor subtype 1 (VR1), which is the receptor for
capsaicin (the ?hot? ingredient in chili peppers) and
servesas a heat-activated ion channel in the pain
pathway (Caterina et al., 1997), is also a member of
this family. The stretch-inhibitable non-selective
cation channel(SIC) is identical to the vanilloid
receptor throughout all of its first 700 residues, but
it exhibits a different sequence in its last 100
residues. VR1 and SICtransport monovalent cations as
well as Ca2+. VR1 is about 10x more permeable to Ca2+
than to monovalent ions. Ca2+ overload probably causes
cell deathafter chronic exposure to capsaicin.
(McCleskey and Gold, 1999) [Transport and binding
proteins, Cations and iron carrying compounds].
Length = 743
Score = 37.4 bits (87), Expect = 0.024
Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 14/89 (15%)
Query: 467 TPLHCAAMFDRCDVVQYLIDEGADLNV--------------LDKEKRSPLLLAASRGGWK 512
T LH AA ++V+ L++ GA + SPL AA G
Sbjct: 130 TALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPS 189
Query: 513 TVLTLVRNKANILLKDINRRNILHLLVLN 541
V L + A+IL D +LHLLV+
Sbjct: 190 IVALLSEDPADILTADSLGNTLLHLLVME 218
Score = 34.3 bits (79), Expect = 0.24
Identities = 56/272 (20%), Positives = 85/272 (31%), Gaps = 66/272 (24%)
Query: 251 NVLDKEKRSPLLLAASRGG-------WKTNGVNTR--------ILNNKKQAVLHLATELN 295
N D+ RS L +AA I AV + L
Sbjct: 46 NCPDRLGRSALFVAAIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILLHLL 105
Query: 296 KVPILLILLQYKDMIDILQGGE--HGRTALHIAAIYDFDECARILVKDFGASLK-RACSN 352
L+ D E G TALH+AA E ++L+ + GAS+ RAC +
Sbjct: 106 AAFRKSGPLEL--ANDQ-YTSEFTPGITALHLAAHRQNYEIVKLLL-ERGASVPARACGD 161
Query: 353 -------------GYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFAAE-GNLPL 398
G P++ AA S + + + I L A GN L
Sbjct: 162 FFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADI---------LTADSLGNTLL 212
Query: 399 HSAVHGGDFKAV---------ELCLKSGAKI-STQQ------FDLSTPVHLACSQGALDI 442
H V +FKA L K+ +++ TP+ LA +G + +
Sbjct: 213 HLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVL 272
Query: 443 VRLMFNLQPSEKLVCLNSTDAQKMTPLHCAAM 474
RL ++ +K A +
Sbjct: 273 FRLKLAIKYKQKKFV-----AWPNGQQLLSLY 299
Score = 32.0 bits (73), Expect = 1.3
Identities = 41/198 (20%), Positives = 67/198 (33%), Gaps = 55/198 (27%)
Query: 66 HGRTALHIAAIYDFDECARILVSEQPECDWIMVKDFGASLK-RACSN------------- 111
G TALH+AA E ++L+ + GAS+ RAC +
Sbjct: 127 PGITALHLAAHRQNYEIVKLLL------------ERGASVPARACGDFFVKSQGVDSFYH 174
Query: 112 GYYPIHDAAKNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFKAV-- 169
G P++ AA S + + + I D+ GN LH V +FKA
Sbjct: 175 GESPLNAAACLGSPSIVALLSEDPAD--------ILTADSLGNTLLHLLVMENEFKAEYE 226
Query: 170 -------ELCLKSGAKI-STQQ------FDLSTPVHLACSQGALDIVRLMFNLQPSEKLV 215
L K+ +++ TP+ LA +G + + RL ++ +K
Sbjct: 227 ELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYKQKKF 286
Query: 216 CLNSTDAQKMTPLHCAAM 233
A +
Sbjct: 287 V-----AWPNGQQLLSLY 299
>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional.
Length = 446
Score = 35.8 bits (82), Expect = 0.068
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 218 NSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPL 261
N TD PLH A+ + +V L+ GAD N DK+ ++PL
Sbjct: 66 NETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPL 109
Score = 35.8 bits (82), Expect = 0.068
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 459 NSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPL 502
N TD PLH A+ + +V L+ GAD N DK+ ++PL
Sbjct: 66 NETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPL 109
>gnl|CDD|165103 PHA02736, PHA02736, Viral ankyrin protein; Provisional.
Length = 154
Score = 34.1 bits (78), Expect = 0.10
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 153 GNLPLHSAVHGGDFKAVE-LCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLM 205
GN PLH AV+ +++ LC + G + + TP ++AC + ++ ++
Sbjct: 92 GNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNIL 145
Score = 34.1 bits (78), Expect = 0.10
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 394 GNLPLHSAVHGGDFKAVE-LCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLM 446
GN PLH AV+ +++ LC + G + + TP ++AC + ++ ++
Sbjct: 92 GNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNIL 145
Score = 28.3 bits (63), Expect = 7.1
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 12/98 (12%)
Query: 527 KDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGENLINLGA--CINLKNNSNESPLHLAA 584
DI NILH L NGG V + +N I+ + N + +H+ +
Sbjct: 13 PDIEGENILHYLCRNGG---------VTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVS 63
Query: 585 RYGRYNTVKKL-LSSERGSFIINESDGEGLTPLHIASK 621
+ + +KL L E G+ I + G TPLHIA
Sbjct: 64 NPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVY 101
>gnl|CDD|239044 cd02129, PA_hSPPL_like, PA_hSPPL_like: Protease-associated domain
containing human signal peptide peptidase-like
(hSPPL)-like. This group contains various PA
domain-containing proteins similar to hSPPL2a and 2b.
These SPPLs are GxGD aspartic proteases. SPPL2a is
sorted to the late endosomes, SPPL2b to the plasma
membrane. In activated dendritic cells, hSPPL2a and 2b
catalyze the intramembrane proteolysis of tumor necrosis
factor alpha triggering IL-12 production. hSPPL2a and 2b
may have a broad substrate spectrum. The significance of
the PA domain to these SPPLs has not been ascertained.
It may be a protein-protein interaction domain. At
peptidase active sites, the PA domain may participate in
substrate binding and/or promoting conformational
changes, which influence the stability and accessibility
of the site to substrate.
Length = 120
Score = 30.4 bits (69), Expect = 0.98
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 40 TELNKVPILLILLQYKDMIDILQ 62
+E K+ I + LL YKDM+DI Q
Sbjct: 88 SEYEKIDIPVALLSYKDMLDIQQ 110
Score = 30.4 bits (69), Expect = 0.98
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 292 TELNKVPILLILLQYKDMIDILQ 314
+E K+ I + LL YKDM+DI Q
Sbjct: 88 SEYEKIDIPVALLSYKDMLDIQQ 110
>gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 31.7 bits (72), Expect = 1.4
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 343 GASLKRACSNGYYPIHDAAKNASSKTMEVFLQFG-ESIGCSREEMISLFAAEGNLPLH 399
G ++ R CS+G I AA+ + +VF+ G ESI C + EM EG L H
Sbjct: 83 GMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEH 140
Score = 30.9 bits (70), Expect = 2.1
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 102 GASLKRACSNGYYPIHDAAKNASSKTMEVFLQFG-ESIGCSREEM 145
G ++ R CS+G I AA+ + +VF+ G ESI C + EM
Sbjct: 83 GMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEM 127
>gnl|CDD|147916 pfam06015, Chordopox_A30L, Chordopoxvirus A30L protein. This
family consists of several short Chordopoxvirus proteins
which are homologous to the A30L protein of Vaccinia
virus. The vaccinia virus A30L protein is required for
the association of electron-dense, granular,
proteinaceous material with the concave surfaces of
crescent membranes, an early step in viral
morphogenesis. A30L is known to interact with the G7L
protein and it has been shown that the stability of each
is dependent on its association with the other.
Length = 71
Score = 28.6 bits (64), Expect = 1.6
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 19/75 (25%)
Query: 528 DINRRNILHLLV-LNGGGHIKEFAEEVAAVFLGENLINLGACINLK-----------NNS 575
DIN N HLL L+ EFA ++ V + LI+ INLK + +
Sbjct: 3 DINESNFNHLLSNLSNNKDDSEFAATLSTV---KELISQ---INLKVLAINKKSKKNSRA 56
Query: 576 NESPLHLAARYG-RY 589
E H++ R RY
Sbjct: 57 IEQLNHVSRRENNRY 71
>gnl|CDD|165108 PHA02741, PHA02741, hypothetical protein; Provisional.
Length = 169
Score = 30.4 bits (68), Expect = 1.8
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 112 GYYPIHDAA----KNASSKTMEVFLQFGESIGCSREEMISLFDAEGNLPLHSAVHGGDFK 167
G IH AA +++ ++ ++ G I + +EM+ EG+ LH A H D
Sbjct: 60 GQMCIHIAAEKHEAQLAAEIIDHLIELGADI--NAQEML-----EGDTALHLAAHRRDHD 112
Query: 168 AVE-LCLKSGAKISTQQFDLSTPVHLA 193
E LC + G + D +P LA
Sbjct: 113 LAEWLCCQPGIDLHFCNADNKSPFELA 139
Score = 30.4 bits (68), Expect = 1.8
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 353 GYYPIHDAA----KNASSKTMEVFLQFGESIGCSREEMISLFAAEGNLPLHSAVHGGDFK 408
G IH AA +++ ++ ++ G I + +EM+ EG+ LH A H D
Sbjct: 60 GQMCIHIAAEKHEAQLAAEIIDHLIELGADI--NAQEML-----EGDTALHLAAHRRDHD 112
Query: 409 AVE-LCLKSGAKISTQQFDLSTPVHLA 434
E LC + G + D +P LA
Sbjct: 113 LAEWLCCQPGIDLHFCNADNKSPFELA 139
>gnl|CDD|191262 pfam05362, Lon_C, Lon protease (S16) C-terminal proteolytic domain.
The Lon serine proteases must hydrolyse ATP to degrade
protein substrates. In Escherichia coli, these proteases
are involved in turnover of intracellular proteins,
including abnormal proteins following heat-shock. The
active site for protease activity resides in a
C-terminal domain. The Lon proteases are classified as
family S16 in Merops.
Length = 205
Score = 30.3 bits (69), Expect = 2.1
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 6/34 (17%)
Query: 496 KEKRSPLLLAASRGGWKTVLTLVRNKANILLKDI 529
KEK LLAA R G KTV+ N+ + L+DI
Sbjct: 152 KEK----LLAAHRAGIKTVIIPKENEKD--LEDI 179
>gnl|CDD|182606 PRK10637, cysG, siroheme synthase; Provisional.
Length = 457
Score = 30.9 bits (70), Expect = 2.2
Identities = 37/148 (25%), Positives = 56/148 (37%), Gaps = 32/148 (21%)
Query: 161 VHGGDF--KAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPS---EKLV 215
V GGD + L L +GA+++ G L +V F+ S +
Sbjct: 18 VGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFD--ESLLDTCWL 75
Query: 216 CLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEK-----------RSPLLLA 264
+ +TD + A R NV+D K RSPL++A
Sbjct: 76 AIAATDDDAVNQRVSEAAEARRIFC----------NVVDAPKAASFIMPSIIDRSPLMVA 125
Query: 265 ASRGGWKTNGVNTRILNNKKQAVL--HL 290
S GG T+ V R+L K +++L HL
Sbjct: 126 VSSGG--TSPVLARLLREKLESLLPQHL 151
Score = 29.3 bits (66), Expect = 6.6
Identities = 36/142 (25%), Positives = 51/142 (35%), Gaps = 29/142 (20%)
Query: 402 VHGGDF--KAVELCLKSGAKISTQQFDLSTPVHLACSQGALDIVRLMFNLQPS---EKLV 456
V GGD + L L +GA+++ G L +V F+ S +
Sbjct: 18 VGGGDVAERKARLLLDAGARLTVNALAFIPQFTAWADAGMLTLVEGPFD--ESLLDTCWL 75
Query: 457 CLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEK-----------RSPLLLA 505
+ +TD + A R NV+D K RSPL++A
Sbjct: 76 AIAATDDDAVNQRVSEAAEARRIFC----------NVVDAPKAASFIMPSIIDRSPLMVA 125
Query: 506 ASRGGWKTVLT-LVRNKANILL 526
S GG VL L+R K LL
Sbjct: 126 VSSGGTSPVLARLLREKLESLL 147
>gnl|CDD|165212 PHA02884, PHA02884, ankyrin repeat protein; Provisional.
Length = 300
Score = 30.3 bits (68), Expect = 3.3
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 156 PLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLA 193
PL+ +V G K +E+ L GA I+ Q D+ TP+ LA
Sbjct: 107 PLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELA 144
Score = 30.3 bits (68), Expect = 3.3
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 397 PLHSAVHGGDFKAVELCLKSGAKISTQQFDLSTPVHLA 434
PL+ +V G K +E+ L GA I+ Q D+ TP+ LA
Sbjct: 107 PLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELA 144
>gnl|CDD|130918 TIGR01859, fruc_bis_ald_, fructose-1,6-bisphosphate aldolase, class
II, various bacterial and amitochondriate protist. This
model represents of one of several subtypes of the class
II fructose-1,6-bisphosphate aldolase, an enzyme of
glycolysis. The subtypes are split into several models
to allow separation of a family of tagatose bisphosphate
aldolases. This form is found in Gram-positive bacteria,
a variety of Gram-negative, and in amitochondriate
protists. The class II enzymes share homology with
tagatose bisphosphate aldolase but not with class I
aldolase [Energy metabolism,
Glycolysis/gluconeogenesis].
Length = 282
Score = 29.6 bits (67), Expect = 4.1
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 256 EKRSPLLLAASRGGWKTNGVNTRILNNKKQAVLHLATELNKVPILLIL---LQYKDMIDI 312
E+ SP+++ S G K G + V L ++ VP+ L L Y+ I
Sbjct: 38 EENSPVIIQVSEGAIKYMGGYKMAVA----MVKTLIERMSIVPVALHLDHGSSYESCIKA 93
Query: 313 LQGG 316
++ G
Sbjct: 94 IKAG 97
>gnl|CDD|218885 pfam06080, DUF938, Protein of unknown function (DUF938). This
family consists of several hypothetical proteins from
both prokaryotes and eukaryotes. The function of this
family is unknown.
Length = 201
Score = 29.3 bits (66), Expect = 4.3
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 9/45 (20%)
Query: 37 HLATELNKVPILLILLQYKD-----MIDILQG-GEHGRTALHIAA 75
A E N+ PIL +L Y +++I G G+H A+ A
Sbjct: 4 APAAERNREPILSVLQSYFAKTTERVLEIASGTGQH---AVFFAP 45
Score = 29.3 bits (66), Expect = 4.3
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 9/45 (20%)
Query: 289 HLATELNKVPILLILLQYKD-----MIDILQG-GEHGRTALHIAA 327
A E N+ PIL +L Y +++I G G+H A+ A
Sbjct: 4 APAAERNREPILSVLQSYFAKTTERVLEIASGTGQH---AVFFAP 45
>gnl|CDD|211331 cd02557, PseudoU_synth_ScRIB2, Pseudouridine synthases similar to
Saccharomyces cerevisiae RIB2. Pseudouridine synthase,
Saccharomyces cerevisiae RIB2_like. This group is
comprised of eukaryotic and bacterial proteins similar
to Saccharomyces cerevisiae RIB2, S. cerevisiae Pus6p
and human hRPUDSD2. S. cerevisiae RIB2 displays two
distinct catalytic activities. The N-terminal domain of
RIB2 is RNA:psi-synthase which makes psi32 on
cytoplasmic tRNAs. Psi32 is highly phylogenetically
conserved. The C-terminal domain of RIB2 has a DRAP
deaminase activity which catalyses the formation of
5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione
5'-phosphate from
2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone
5'-phosphate during riboflavin biosynthesis. S.
cerevisiae Pus6p makes the psi31 of cytoplasmic and
mitochondrial tRNAs.
Length = 213
Score = 29.1 bits (66), Expect = 5.7
Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
Query: 579 PLHLAARYGRYNTVKKLLSSERGS 602
P+H RY RYNTV ++L SE G
Sbjct: 35 PVHPTGRY-RYNTVTEILKSEYGL 57
>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional.
Length = 209
Score = 29.0 bits (65), Expect = 6.7
Identities = 19/101 (18%), Positives = 43/101 (42%), Gaps = 4/101 (3%)
Query: 479 DVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWK--TVLTLVRNKANILLKDINRRNILH 536
++++ LID G+ + D++ ++ L + + + L+ + + L KD + NIL+
Sbjct: 104 EILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILY 163
Query: 537 -LLVLNGGGHIKEFAEEVAAVFLGENLINLGACINLKNNSN 576
++ + I +F + N C +L N
Sbjct: 164 SYILFHSDKKIFDFLTSLGIDINETNKSGYN-CYDLIKFRN 203
>gnl|CDD|217145 pfam02616, ScpA_ScpB, ScpA/B protein. ScpA and ScpB participate in
chromosomal partition during cell division. It may act
via the formation of a condensin-like complex containing
smc that pull DNA away from mid-cell into both cell
halves. These proteins are part of the Kleisin
superfamily.
Length = 177
Score = 28.5 bits (64), Expect = 7.5
Identities = 15/65 (23%), Positives = 23/65 (35%), Gaps = 9/65 (13%)
Query: 476 DRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKA-NILLKDINRRNI 534
D ++ + LN LD + LL AS L+R KA +L +
Sbjct: 13 DIAEITDQYLQYIKTLNKLDLRISTDYLLIAS--------ILLRMKAEALLRSFSKKPVT 64
Query: 535 LHLLV 539
L +
Sbjct: 65 LDEFI 69
>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional.
Length = 494
Score = 28.9 bits (65), Expect = 8.5
Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 7/69 (10%)
Query: 213 KLVCLNSTDAQKMTPLHCAAMFDRCDVVQYLIDEGADLNVLDKEKRSPLLLAASRGGWKT 272
K + +N D + PL +A D + YL+ G D+ + K+ + L A G
Sbjct: 245 KYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHG---- 300
Query: 273 NGVNTRILN 281
N +LN
Sbjct: 301 ---NIDMLN 306
>gnl|CDD|237282 PRK13055, PRK13055, putative lipid kinase; Reviewed.
Length = 334
Score = 28.8 bits (65), Expect = 9.2
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Query: 524 ILLKDINRRNILHL--LVLNGGGHI 546
I++K N +LHL L+LNGG HI
Sbjct: 225 IIVKTANLFELLHLMALILNGGKHI 249
>gnl|CDD|233050 TIGR00609, recB, exodeoxyribonuclease V, beta subunit. The RecBCD
holoenzyme is a multifunctional nuclease with potent
ATP-dependent exodeoxyribonuclease activity. Ejection of
RecD, as occurs at chi recombinational hotspots,
cripples exonuclease activity in favor of recombinagenic
helicase activity. All proteins in this family for which
functions are known are DNA-DNA helicases that are used
as part of an exonuclease-helicase complex (made up of
RecBCD homologs) that function to generate substrates
for the initiation of recombination and recombinational
repair. This family is based on the phylogenomic
analysis of JA Eisen (1999, Ph.D. Thesis, Stanford
University) [DNA metabolism, DNA replication,
recombination, and repair].
Length = 1087
Score = 28.9 bits (65), Expect = 9.5
Identities = 21/78 (26%), Positives = 27/78 (34%), Gaps = 8/78 (10%)
Query: 25 TRILNNKKQAVLHLATELNKVPILLILLQYKDMIDILQGGEHGRTALH------IAAIYD 78
TRI QA+ L L + L + + Q R AL I I+
Sbjct: 60 TRIRGRIHQALRALKAALTSQELPEPLKEAIQDEKVKQAITRLRNALATMDEAAIYTIHG 119
Query: 79 FDECARILVSEQPECDWI 96
F C R+L E D I
Sbjct: 120 F--CQRMLEQHAFESDEI 135
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.320 0.136 0.399
Gapped
Lambda K H
0.267 0.0786 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 31,612,870
Number of extensions: 3076013
Number of successful extensions: 2803
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2519
Number of HSP's successfully gapped: 205
Length of query: 641
Length of database: 10,937,602
Length adjustment: 103
Effective length of query: 538
Effective length of database: 6,369,140
Effective search space: 3426597320
Effective search space used: 3426597320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (27.6 bits)