Query psy8764
Match_columns 420
No_of_seqs 338 out of 1674
Neff 6.8
Searched_HMMs 46136
Date Fri Aug 16 18:38:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8764.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8764hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0510|consensus 100.0 6.7E-52 1.5E-56 434.6 18.4 294 2-419 316-645 (929)
2 KOG0510|consensus 99.9 3.7E-22 8.1E-27 211.1 10.2 106 209-320 769-881 (929)
3 TIGR00870 trp transient-recept 99.7 3E-16 6.6E-21 173.1 16.4 195 2-209 138-371 (743)
4 KOG4412|consensus 99.6 7.7E-15 1.7E-19 132.5 9.8 82 2-83 48-131 (226)
5 KOG4412|consensus 99.6 2E-14 4.3E-19 129.9 10.0 114 2-118 82-196 (226)
6 KOG3676|consensus 99.5 3.8E-13 8.3E-18 143.8 18.0 193 3-208 195-412 (782)
7 PF12796 Ank_2: Ankyrin repeat 99.5 1.6E-13 3.4E-18 110.8 9.8 77 2-83 7-84 (89)
8 PF13857 Ank_5: Ankyrin repeat 99.5 5E-14 1.1E-18 105.2 4.6 55 11-65 1-56 (56)
9 PHA02791 ankyrin-like protein; 99.4 1.1E-12 2.4E-17 129.3 13.3 126 2-133 40-167 (284)
10 PHA02875 ankyrin repeat protei 99.4 1.2E-12 2.6E-17 134.5 13.5 112 3-118 113-226 (413)
11 PHA02741 hypothetical protein; 99.4 2.3E-12 4.9E-17 117.1 12.4 117 2-121 31-159 (169)
12 PHA02946 ankyin-like protein; 99.4 2.3E-12 5E-17 134.6 14.0 112 3-118 50-164 (446)
13 PHA02791 ankyrin-like protein; 99.4 2E-12 4.4E-17 127.4 12.5 111 2-120 9-120 (284)
14 KOG0512|consensus 99.4 7E-13 1.5E-17 119.2 7.5 86 3-88 74-160 (228)
15 PHA02875 ankyrin repeat protei 99.4 4.2E-12 9.2E-17 130.4 14.1 113 2-117 78-191 (413)
16 PHA02884 ankyrin repeat protei 99.4 3.8E-12 8.3E-17 126.1 13.2 84 2-86 43-132 (300)
17 PHA02795 ankyrin-like protein; 99.4 1.4E-12 3.1E-17 134.5 10.1 81 3-84 199-288 (437)
18 PF13637 Ank_4: Ankyrin repeat 99.4 1.5E-12 3.1E-17 96.2 6.6 53 26-78 1-54 (54)
19 PHA02878 ankyrin repeat protei 99.3 8.4E-12 1.8E-16 131.0 13.8 125 4-133 146-276 (477)
20 PHA02743 Viral ankyrin protein 99.3 9.6E-12 2.1E-16 112.9 11.6 109 6-118 38-152 (166)
21 PLN03192 Voltage-dependent pot 99.3 1.1E-11 2.4E-16 138.6 14.0 113 2-120 535-648 (823)
22 PHA02736 Viral ankyrin protein 99.3 8.1E-12 1.8E-16 111.3 10.3 76 6-82 72-150 (154)
23 PHA02859 ankyrin repeat protei 99.3 3.1E-11 6.6E-16 113.7 14.2 77 3-83 32-115 (209)
24 KOG0509|consensus 99.3 9.3E-12 2E-16 130.4 11.5 82 1-83 87-170 (600)
25 PHA02874 ankyrin repeat protei 99.3 1.8E-11 3.9E-16 127.0 13.7 113 3-119 102-215 (434)
26 PHA02878 ankyrin repeat protei 99.3 1.5E-11 3.3E-16 129.1 12.9 113 2-119 178-292 (477)
27 KOG0508|consensus 99.3 6.1E-12 1.3E-16 127.6 7.9 109 2-116 127-237 (615)
28 PHA02743 Viral ankyrin protein 99.3 1.8E-11 3.9E-16 111.1 9.8 79 6-85 74-155 (166)
29 PHA02874 ankyrin repeat protei 99.3 5E-11 1.1E-15 123.6 14.4 108 2-114 134-242 (434)
30 KOG0514|consensus 99.3 2.4E-11 5.2E-16 120.0 10.6 106 4-113 319-426 (452)
31 PHA03095 ankyrin-like protein; 99.3 4.8E-11 1E-15 124.2 12.9 113 2-118 199-314 (471)
32 PHA03095 ankyrin-like protein; 99.2 5.9E-11 1.3E-15 123.6 13.4 114 2-120 24-145 (471)
33 PHA02798 ankyrin-like protein; 99.2 5.3E-11 1.1E-15 125.5 12.9 76 5-81 89-171 (489)
34 PHA03100 ankyrin repeat protei 99.2 5.4E-11 1.2E-15 124.2 12.8 114 2-119 83-201 (480)
35 PHA02741 hypothetical protein; 99.2 3.4E-11 7.4E-16 109.4 9.7 77 5-82 77-156 (169)
36 PHA02798 ankyrin-like protein; 99.2 5.8E-11 1.3E-15 125.2 12.8 114 2-120 48-174 (489)
37 KOG0509|consensus 99.2 5.3E-11 1.2E-15 124.8 11.4 87 2-88 54-142 (600)
38 PHA02859 ankyrin repeat protei 99.2 6.2E-11 1.3E-15 111.6 10.9 114 3-121 64-186 (209)
39 PHA03100 ankyrin repeat protei 99.2 7.7E-11 1.7E-15 123.1 12.6 113 4-120 155-276 (480)
40 PHA02716 CPXV016; CPX019; EVM0 99.2 1.2E-10 2.6E-15 127.8 13.5 62 3-65 190-254 (764)
41 PTZ00322 6-phosphofructo-2-kin 99.2 5.7E-11 1.2E-15 129.9 10.7 78 2-80 92-170 (664)
42 KOG0195|consensus 99.2 2.4E-11 5.3E-16 116.8 6.8 80 2-82 44-124 (448)
43 PHA02876 ankyrin repeat protei 99.2 1.7E-10 3.6E-15 126.5 13.9 80 2-82 155-235 (682)
44 KOG0508|consensus 99.2 4.1E-11 8.9E-16 121.6 7.8 78 2-80 160-237 (615)
45 PHA02989 ankyrin repeat protei 99.2 2.1E-10 4.6E-15 121.1 13.3 114 3-120 86-211 (494)
46 KOG0514|consensus 99.2 5.6E-11 1.2E-15 117.5 7.7 78 2-80 350-429 (452)
47 PHA02989 ankyrin repeat protei 99.2 1E-10 2.2E-15 123.4 9.7 75 6-82 238-313 (494)
48 KOG4214|consensus 99.1 9.3E-11 2E-15 95.6 6.8 82 2-85 12-94 (117)
49 KOG4177|consensus 99.1 1.2E-10 2.6E-15 130.7 9.9 85 2-87 517-602 (1143)
50 PHA02795 ankyrin-like protein; 99.1 2.4E-10 5.2E-15 118.1 11.4 112 2-116 159-284 (437)
51 PHA02946 ankyin-like protein; 99.1 5.7E-10 1.2E-14 116.7 13.5 126 2-133 82-215 (446)
52 PHA02716 CPXV016; CPX019; EVM0 99.1 3.6E-10 7.7E-15 124.1 11.9 85 2-86 152-242 (764)
53 PLN03192 Voltage-dependent pot 99.1 2.4E-10 5.2E-15 127.9 10.3 115 2-121 568-682 (823)
54 KOG0512|consensus 99.1 1.9E-10 4.2E-15 103.6 6.7 78 1-79 106-185 (228)
55 PHA02884 ankyrin repeat protei 99.1 4E-10 8.6E-15 111.8 9.4 76 2-78 80-157 (300)
56 PHA02917 ankyrin-like protein; 99.1 9.1E-10 2E-14 120.3 12.5 110 2-116 113-253 (661)
57 KOG0502|consensus 99.1 3.3E-10 7.1E-15 105.5 7.5 103 18-123 152-255 (296)
58 PHA02876 ankyrin repeat protei 99.1 1.7E-09 3.7E-14 118.6 14.1 112 4-119 320-434 (682)
59 PHA02792 ankyrin-like protein; 99.0 8.7E-10 1.9E-14 118.2 9.2 114 1-118 81-241 (631)
60 KOG0195|consensus 99.0 3E-10 6.4E-15 109.4 5.0 81 8-88 16-97 (448)
61 PHA02730 ankyrin-like protein; 99.0 1.8E-09 4E-14 116.7 11.3 62 21-82 36-103 (672)
62 KOG4177|consensus 99.0 6E-10 1.3E-14 125.1 7.6 82 2-84 550-632 (1143)
63 KOG0502|consensus 99.0 9.2E-10 2E-14 102.6 7.3 83 2-85 170-253 (296)
64 PHA02736 Viral ankyrin protein 99.0 7.3E-10 1.6E-14 98.7 6.4 96 19-117 48-149 (154)
65 PHA02917 ankyrin-like protein; 99.0 1.8E-09 3.8E-14 118.1 9.9 81 4-85 431-513 (661)
66 PHA02730 ankyrin-like protein; 99.0 1.4E-09 3.1E-14 117.5 9.0 81 6-87 443-527 (672)
67 KOG0515|consensus 99.0 2.3E-09 5E-14 110.1 9.6 81 2-83 560-641 (752)
68 PHA02792 ankyrin-like protein; 99.0 4.1E-09 9E-14 113.0 12.0 84 2-86 349-438 (631)
69 COG0666 Arp FOG: Ankyrin repea 99.0 5.7E-09 1.2E-13 95.2 11.3 110 2-115 83-201 (235)
70 cd00204 ANK ankyrin repeats; 99.0 1.3E-08 2.9E-13 84.4 12.6 79 2-81 17-96 (126)
71 KOG0522|consensus 98.9 3.8E-09 8.2E-14 108.9 9.2 100 16-139 45-145 (560)
72 KOG0507|consensus 98.9 5.1E-09 1.1E-13 111.7 8.5 116 2-118 92-213 (854)
73 COG0666 Arp FOG: Ankyrin repea 98.9 5.7E-09 1.2E-13 95.1 7.8 79 3-81 122-203 (235)
74 PF12796 Ank_2: Ankyrin repeat 98.8 2.2E-08 4.9E-13 80.5 9.9 83 30-118 1-83 (89)
75 KOG1710|consensus 98.8 9.4E-09 2E-13 99.2 7.8 86 2-88 22-109 (396)
76 cd00204 ANK ankyrin repeats; 98.8 6.1E-08 1.3E-12 80.4 11.7 94 21-117 2-96 (126)
77 KOG0507|consensus 98.7 5.4E-09 1.2E-13 111.5 3.5 84 1-85 58-142 (854)
78 PF13637 Ank_4: Ankyrin repeat 98.7 1.8E-08 3.9E-13 74.2 5.3 44 2-46 11-54 (54)
79 TIGR00870 trp transient-recept 98.7 7.5E-08 1.6E-12 106.7 11.6 117 2-118 27-199 (743)
80 PF13606 Ank_3: Ankyrin repeat 98.7 2E-08 4.4E-13 65.4 3.6 28 25-52 1-28 (30)
81 PF00023 Ank: Ankyrin repeat H 98.7 2.5E-08 5.5E-13 66.1 4.0 31 25-55 1-32 (33)
82 KOG0505|consensus 98.6 7.2E-08 1.6E-12 99.7 6.6 85 1-86 49-134 (527)
83 KOG4214|consensus 98.5 2.5E-07 5.3E-12 75.8 6.9 63 2-65 44-107 (117)
84 KOG1710|consensus 98.5 3.2E-07 6.9E-12 88.8 7.6 79 2-80 55-134 (396)
85 KOG0818|consensus 98.4 5.4E-07 1.2E-11 92.4 8.3 77 2-79 143-221 (669)
86 KOG0515|consensus 98.4 3.2E-07 7E-12 94.7 6.1 76 2-78 593-672 (752)
87 KOG0505|consensus 98.4 4.3E-07 9.3E-12 94.1 6.9 77 10-87 183-260 (527)
88 KOG0705|consensus 98.4 6.3E-07 1.4E-11 93.3 7.5 80 4-83 636-719 (749)
89 PTZ00322 6-phosphofructo-2-kin 98.4 2E-06 4.3E-11 94.4 11.1 88 28-118 84-172 (664)
90 KOG0783|consensus 98.3 2.3E-07 4.9E-12 99.9 3.0 97 8-108 34-132 (1267)
91 KOG0506|consensus 98.3 5E-07 1.1E-11 92.3 4.6 77 2-79 516-594 (622)
92 KOG2384|consensus 98.3 1.8E-06 3.8E-11 79.2 7.0 65 18-82 4-70 (223)
93 KOG3676|consensus 98.3 1.9E-06 4.1E-11 93.2 7.8 77 3-80 251-330 (782)
94 KOG3609|consensus 98.2 4E-05 8.6E-10 83.6 17.5 82 2-83 35-156 (822)
95 KOG4369|consensus 98.2 9E-07 2E-11 97.7 3.5 83 2-85 767-851 (2131)
96 PF13857 Ank_5: Ankyrin repeat 98.0 4.1E-06 8.8E-11 62.3 3.2 41 45-85 1-43 (56)
97 KOG4369|consensus 98.0 7.6E-06 1.6E-10 90.7 6.1 113 2-117 834-949 (2131)
98 KOG0782|consensus 97.9 1.2E-05 2.7E-10 83.6 5.2 64 19-82 892-958 (1004)
99 PF13606 Ank_3: Ankyrin repeat 97.8 2.3E-05 4.9E-10 51.0 3.8 27 57-83 1-27 (30)
100 KOG0783|consensus 97.6 0.0001 2.3E-09 80.0 5.9 65 3-68 63-129 (1267)
101 PF00023 Ank: Ankyrin repeat H 97.5 0.00011 2.5E-09 48.4 3.8 29 57-85 1-29 (33)
102 PLN03223 Polycystin cation cha 97.2 0.00074 1.6E-08 77.1 7.5 54 332-385 1173-1232(1634)
103 smart00248 ANK ankyrin repeats 97.1 0.00067 1.5E-08 40.7 3.7 28 25-52 1-28 (30)
104 KOG0521|consensus 97.1 0.00038 8.2E-09 77.4 4.3 66 23-88 653-719 (785)
105 PF08016 PKD_channel: Polycyst 97.1 0.00081 1.7E-08 70.0 6.5 88 330-417 206-316 (425)
106 KOG0511|consensus 97.1 0.00088 1.9E-08 67.4 6.3 49 3-52 47-95 (516)
107 KOG0782|consensus 97.1 0.0015 3.3E-08 68.6 8.0 79 2-80 909-989 (1004)
108 KOG0818|consensus 97.0 0.0034 7.4E-08 65.1 9.2 70 19-88 120-197 (669)
109 KOG0520|consensus 96.9 0.00042 9.1E-09 77.2 1.6 72 6-77 621-699 (975)
110 KOG0506|consensus 96.9 0.0012 2.7E-08 68.1 4.8 59 22-80 502-561 (622)
111 KOG0521|consensus 96.7 0.001 2.2E-08 74.1 3.2 78 2-80 666-744 (785)
112 KOG0511|consensus 96.7 0.0029 6.3E-08 63.8 6.0 58 27-84 37-95 (516)
113 KOG2505|consensus 96.3 0.007 1.5E-07 63.0 6.0 53 23-78 427-480 (591)
114 KOG0520|consensus 96.0 0.0036 7.9E-08 70.0 2.5 85 3-88 585-671 (975)
115 KOG3599|consensus 95.2 0.042 9.1E-07 61.6 7.1 88 330-417 461-573 (798)
116 smart00248 ANK ankyrin repeats 95.0 0.044 9.5E-07 32.3 3.8 27 57-83 1-27 (30)
117 KOG0522|consensus 94.5 0.049 1.1E-06 57.3 5.0 47 1-48 64-110 (560)
118 KOG2384|consensus 93.3 0.2 4.3E-06 46.6 6.1 52 1-52 21-72 (223)
119 PF00520 Ion_trans: Ion transp 93.1 0.34 7.4E-06 43.3 7.4 74 342-419 4-80 (200)
120 KOG0705|consensus 92.8 0.14 3E-06 54.5 4.8 50 2-52 671-720 (749)
121 KOG3609|consensus 91.9 0.23 4.9E-06 55.1 5.2 81 337-417 386-485 (822)
122 PF06128 Shigella_OspC: Shigel 67.1 11 0.00023 36.4 5.1 46 37-82 228-278 (284)
123 PF11929 DUF3447: Domain of un 57.9 16 0.00036 28.4 4.0 48 28-81 8-55 (76)
124 KOG2505|consensus 45.3 33 0.00072 36.5 4.9 43 39-81 404-453 (591)
125 PF11929 DUF3447: Domain of un 32.9 53 0.0011 25.5 3.2 40 1-48 15-54 (76)
126 COG5570 Uncharacterized small 26.5 61 0.0013 23.9 2.3 22 272-293 27-48 (57)
127 KOG4591|consensus 23.2 57 0.0012 30.9 2.1 46 24-69 220-271 (280)
No 1
>KOG0510|consensus
Probab=100.00 E-value=6.7e-52 Score=434.65 Aligned_cols=294 Identities=25% Similarity=0.344 Sum_probs=240.0
Q ss_pred CCCHHHHHHHHh-cCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcccc----cCCCCcHHHHHHHcCCHHHHHH
Q psy8764 2 SGYTNTMVHLNS-VHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKLLY----NCMDLSAIDYAIYYKFPEAALA 76 (420)
Q Consensus 2 ~G~~e~ve~LL~-~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i~~----n~~g~TpLh~A~~~g~~evv~~ 76 (420)
.|..++|+.||+ .+..++|+.|..|+||||+|+++||.++|++||++||.... |.+|.||||.|+.+|+..+|+.
T Consensus 316 yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av~~ 395 (929)
T KOG0510|consen 316 YGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAVQK 395 (929)
T ss_pred cccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHHHH
Confidence 588999999999 67778999999999999999999999999999999998843 8999999999999999999999
Q ss_pred HHhCCCCccc----------------h--hcccCCCCcchHHHHHhhCHHHHHHHhhccccccccCCCCcceeeeechhh
Q psy8764 77 MVTHNTRGTE----------------I--MSLRSDKHPCVTLALVASMPRVFESVQDKSITKANCKKDSKSFYIKYNFSC 138 (420)
Q Consensus 77 Ll~~~~~~~~----------------~--~~~~~~~~~~~~~~li~~~p~~~~~lLD~ci~~~~~~~~~~~~~i~y~f~~ 138 (420)
|+.||..-.. + .....+.+.||..++++++|++++.++|.|+.++.+++++
T Consensus 396 Li~~Ga~I~~~n~~g~SA~~~~~~~~~p~~~~~~~~n~c~~~~~i~~~pe~~e~vlD~c~l~~~e~~~~----------- 464 (929)
T KOG0510|consen 396 LISHGADIGVKNKKGKSAFDTRPDRCLPVFVHRSPFNKCPTTELIEPLPECFEIVLDFCILKSQERKDS----------- 464 (929)
T ss_pred HHHcCCceeeccccccccccccccccccHHHhhCCCCCcchhhhhccchHHHHHHHHHHHHHHhhccCC-----------
Confidence 9999765421 1 1112223789999999999999999999999999888765
Q ss_pred ccccccccccccccCCCCCCCCCCcchhhHHHHHH-------------HHHhhhhhhHHHHHHHHHHHhhhcccceeeee
Q psy8764 139 LQCLRIYPEINEKTGDATAISKPIPLPALNNTALH-------------LATISHHFYRPTFLDRNLALFFHNCVFVGSNP 205 (420)
Q Consensus 139 Lq~p~~~~~~~~~~~~~~~~~~~~pl~~Ln~mv~h-------------LL~~KW~~yg~~~~~~nl~~y~~~~~~lfl~~ 205 (420)
|. +.+...+. .+|.||++ +|.|||++||+++|+.||++|+ +|++|
T Consensus 465 ---~~-----------~~Q~~~~~---~~~~mv~~~~~eLL~HPL~ssfL~mKW~~~g~~~~~~nL~~Y~-----lFlv~ 522 (929)
T KOG0510|consen 465 ---PT-----------PLQDEAAP---ILNIMVDKEQIELLEHPLSSSFLFMKWNRYGKYFHLNNLLIYS-----LFLVS 522 (929)
T ss_pred ---CC-----------hhhhhhhh---HHHHHhhhhHHHHhcChhHHHHHHHHHHHhhHHHHHHHHHHHH-----HHHHH
Confidence 21 11111121 67778776 4559999999999999999999 99999
Q ss_pred cchhhhhhhhhhhhhhcchhhHHhhccccceeecCCCCCcccchhhhhhhhhccCccchhhhhhhhccCCCcchhhhHHH
Q psy8764 206 TPTLFLQVLLHTELERNLPKFLLEKVDKMEIYEYPNECKGKLGFLDLVIRKWFCNPFTEDAIDMVLESNGNDVFTDEIDK 285 (420)
Q Consensus 206 lT~~~~qv~l~t~le~~lp~~~~~~vd~~~~~~ypn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 285 (420)
+|.++ +|+ |-|..| ++.|
T Consensus 523 lT~Yv----~~~----~~~~~~-----------------n~~~------------------------------------- 540 (929)
T KOG0510|consen 523 LTIYV----LLI----KAGMAF-----------------NSSG------------------------------------- 540 (929)
T ss_pred HHHHH----HHh----cccccc-----------------cccc-------------------------------------
Confidence 99976 111 111111 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccC
Q psy8764 286 LKRKLNEIQIHLDHQFMFLRLIVHKMDIKTETDERDEGTSSNKELHPLLYICGTAISTYMLFSVAVQSVQIYQQKWHYLF 365 (420)
Q Consensus 286 ~k~rlk~~~~~~~~q~~l~kli~~~~ei~sea~d~d~~~~~~~~~~~~~~~~~~~i~~~~~~~i~~E~~Ql~~~~~~Yf~ 365 (420)
-||.++++| .++..+..++..+.+|+++|+++++++++||++|+|||+++||.
T Consensus 541 -------------------------~~~~~~~s~--~se~lr~~~t~~i~~~~ili~~~i~~~~~~E~iQifqqk~~Y~~ 593 (929)
T KOG0510|consen 541 -------------------------TEIISKTSD--HSEILRNNNTMLIAFCMILIFTSIILGILRECIQIFQQKRHYFM 593 (929)
T ss_pred -------------------------ceeehhccc--hhhhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 134445444 33334445688899999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHhhhcc
Q psy8764 366 DPTNIVALLLFFSATIMIVPLFTKGRYMTDYQISFTSLTVFLSWLTLLLNLQSL 419 (420)
Q Consensus 366 d~~N~~ew~ly~~si~~v~~~~~~~~~~~~~qw~~ga~aifl~W~~lll~l~rf 419 (420)
|++|++||++|++++++|.|.+. ..+.+|||++||+||||+||||+|++|||
T Consensus 594 ~i~Nimew~iyts~li~v~~~~~--~~~~~~Q~~laa~aV~l~W~nllLmi~~~ 645 (929)
T KOG0510|consen 594 DIENIMEWFIYTSALITVYPLFF--EITAHLQWVLAAFAVLLGWMNLLLMIGRF 645 (929)
T ss_pred hhHHHHHHHHHhhhhheeehhhh--hhHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999999999999999999985 25679999999999999999999999998
No 2
>KOG0510|consensus
Probab=99.86 E-value=3.7e-22 Score=211.11 Aligned_cols=106 Identities=29% Similarity=0.440 Sum_probs=85.2
Q ss_pred hhhhhhhhhhhhhcchhhHHhhccccceeecCCC-------CCcccchhhhhhhhhccCccchhhhhhhhccCCCcchhh
Q psy8764 209 LFLQVLLHTELERNLPKFLLEKVDKMEIYEYPNE-------CKGKLGFLDLVIRKWFCNPFTEDAIDMVLESNGNDVFTD 281 (420)
Q Consensus 209 ~~~qv~l~t~le~~lp~~~~~~vd~~~~~~ypn~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (420)
+||||+|||.+|+|||-||+.|||+++.++|||. |++. |.. ...-++++... .++...++.+...+.
T Consensus 769 lamQv~L~s~iE~~L~~~~l~~~~k~~~~~y~~~~~l~~s~pr~~-~~~-~~~~~~~~~~~----~~~~~s~~~d~~~e~ 842 (929)
T KOG0510|consen 769 LAMQVNLHSRIEQKLPHHFLQRVDKKSTIVYPNKQRLMNSYPRSG-GLL-FQSALPLGGNR----VLFGMSDSSDMSTEK 842 (929)
T ss_pred HHHHHHHHHHHHHHccchhHhhhhhcceEeccccccccccCCCCC-cee-eeeeeccCCcc----eecccCCCcchhHHH
Confidence 9999999999999999999999999999999998 5442 211 11112222111 112234567889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCccC
Q psy8764 282 EIDKLKRKLNEIQIHLDHQFMFLRLIVHKMDIKTETDER 320 (420)
Q Consensus 282 e~~~~k~rlk~~~~~~~~q~~l~kli~~~~ei~sea~d~ 320 (420)
|+.+|++++++++..+++||.++|||+++|+|.+|..|.
T Consensus 843 ~~~rq~~~l~~~~~~l~~q~~~~rli~~~~~iltek~d~ 881 (929)
T KOG0510|consen 843 ELSRQQEPLSDAGFQLELQHPLLRLIVEKMEILTEKCDQ 881 (929)
T ss_pred HHHHhhhhhhhhhhhhhccCchhhhhhhhheechhhhcc
Confidence 999999999999999999999999999999999998884
No 3
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.69 E-value=3e-16 Score=173.13 Aligned_cols=195 Identities=9% Similarity=0.020 Sum_probs=118.8
Q ss_pred CCCHHHHHHHHhcCCCCCCCcC--------------CCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVD--------------KDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAI 66 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D--------------~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~ 66 (420)
+|+.+++++|++.|+ ++|..+ ..|.||||+|+..|+.+++++|+++|||+ ..|..|+||||+|+
T Consensus 138 ~~~~eiVklLL~~GA-dv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~ 216 (743)
T TIGR00870 138 RQNYEIVKLLLERGA-SVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLV 216 (743)
T ss_pred hCCHHHHHHHHhCCC-CCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHH
Confidence 689999999999875 666542 36999999999999999999999999999 89999999999999
Q ss_pred HcC---------CHHHHHHHHhCCCC---ccchhc-ccCCCCcchHHHHHhhCHHHHHHHhhccccc--cccCCCCccee
Q psy8764 67 YYK---------FPEAALAMVTHNTR---GTEIMS-LRSDKHPCVTLALVASMPRVFESVQDKSITK--ANCKKDSKSFY 131 (420)
Q Consensus 67 ~~g---------~~evv~~Ll~~~~~---~~~~~~-~~~~~~~~~~~~li~~~p~~~~~lLD~ci~~--~~~~~~~~~~~ 131 (420)
..+ ...+.++++...+. ...+.. .+.++.+....+.....+++++.+++.-... -...+.++...
T Consensus 217 ~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~~kk~~a~~~~~~~~ 296 (743)
T TIGR00870 217 MENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYKQKKFVAWPNGQQLL 296 (743)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHhcceeeccCcchHhH
Confidence 987 23344555544322 211111 1222233345566677788888888743211 11223333333
Q ss_pred eeechhhccccccccccccccCCCCCCCC------CCcchhhH---HHHHHHHHhhhhhhHHHHHHHHHHHhhhccccee
Q psy8764 132 IKYNFSCLQCLRIYPEINEKTGDATAISK------PIPLPALN---NTALHLATISHHFYRPTFLDRNLALFFHNCVFVG 202 (420)
Q Consensus 132 i~y~f~~Lq~p~~~~~~~~~~~~~~~~~~------~~pl~~Ln---~mv~hLL~~KW~~yg~~~~~~nl~~y~~~~~~lf 202 (420)
-.|+++.++.- ++.. ....... ..|....- +-++.|+..||..|++..++.++.+|+ ++
T Consensus 297 ~~~~~~~~~~~---~~~~----~~~~ll~~~~~~~~~p~~~~~~~~~P~~~l~~~kw~pf~kf~~~~~~~~~f-----l~ 364 (743)
T TIGR00870 297 SLYWLEELDGW---RRKQ----SVLELIVVFVIGLKFPELSDMYLIAPLSRLGQFKWKPFIKFIFHSASYLYF-----LY 364 (743)
T ss_pred hhhccccCCcc---cccc----cHHHHHHHHHHhhcChHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHH-----HH
Confidence 33333333210 0000 0000000 00111100 001116778999999998889999999 88
Q ss_pred eeecchh
Q psy8764 203 SNPTPTL 209 (420)
Q Consensus 203 l~~lT~~ 209 (420)
++.+|+.
T Consensus 365 l~~~~~~ 371 (743)
T TIGR00870 365 LIIFTSV 371 (743)
T ss_pred HHHHHHH
Confidence 8877663
No 4
>KOG4412|consensus
Probab=99.58 E-value=7.7e-15 Score=132.53 Aligned_cols=82 Identities=20% Similarity=0.146 Sum_probs=74.9
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHC-CCcc-cccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSL-NCKL-LYNCMDLSAIDYAIYYKFPEAALAMVT 79 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~-Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~ 79 (420)
-||.+++++|++.....+|..|+.||||||.||..|+.++|+-|+.+ |+|+ ..++.|+||||+|+..|+.|++++|+.
T Consensus 48 ~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle 127 (226)
T KOG4412|consen 48 FGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASNGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLE 127 (226)
T ss_pred cCchhHHHHHHhcCCCCCCCccccCCchhhhhhhcCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHh
Confidence 48999999999765556888999999999999999999999999988 9999 899999999999999999999999999
Q ss_pred CCCC
Q psy8764 80 HNTR 83 (420)
Q Consensus 80 ~~~~ 83 (420)
+++-
T Consensus 128 ~ga~ 131 (226)
T KOG4412|consen 128 KGAL 131 (226)
T ss_pred cCCC
Confidence 8753
No 5
>KOG4412|consensus
Probab=99.55 E-value=2e-14 Score=129.93 Aligned_cols=114 Identities=13% Similarity=0.091 Sum_probs=97.6
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
.|+-|+|+.|+.....++|.+++.|.|||||||..|..+++++|+++||.+ ++|+.|+||||-|+.-|+.+++++|+..
T Consensus 82 ~g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~ 161 (226)
T KOG4412|consen 82 NGNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQ 161 (226)
T ss_pred cCcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhc
Confidence 588999999999855689999999999999999999999999999999999 9999999999999999999999999988
Q ss_pred CCCccchhcccCCCCcchHHHHHhhCHHHHHHHhhccc
Q psy8764 81 NTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSI 118 (420)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lLD~ci 118 (420)
++-.+.. +..+.+..+.++.+.+|+++..+.....
T Consensus 162 ~a~~n~q---Dk~G~TpL~~al~e~~~d~a~lLV~~gA 196 (226)
T KOG4412|consen 162 GAPLNTQ---DKYGFTPLHHALAEGHPDVAVLLVRAGA 196 (226)
T ss_pred CCCCCcc---cccCccHHHHHHhccCchHHHHHHHhcc
Confidence 7433322 2222444667788999999988876554
No 6
>KOG3676|consensus
Probab=99.52 E-value=3.8e-13 Score=143.80 Aligned_cols=193 Identities=12% Similarity=0.036 Sum_probs=113.7
Q ss_pred CCHHHHHHHHhcCCCCCCCc---------C--------------CCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCC
Q psy8764 3 GYTNTMVHLNSVHSHLLDQV---------D--------------KDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMD 58 (420)
Q Consensus 3 G~~e~ve~LL~~~~~~in~~---------D--------------~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g 58 (420)
-+.++|+.|++.++ ++++. | -.|..||-+||..|..++|++|+++|||+ .+|..|
T Consensus 195 ~~~~~V~lLl~~gA-DV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~G 273 (782)
T KOG3676|consen 195 RDAELVRLLLAAGA-DVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNG 273 (782)
T ss_pred ccHHHHHHHHHcCC-chhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCC
Confidence 45678888888765 44321 1 13678888888888888888888888888 888888
Q ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCccchhcccCCCCcchH-HHHHhhCHHHHHHHhhccccccccCCCCcceeeeechh
Q psy8764 59 LSAIDYAIYYKFPEAALAMVTHNTRGTEIMSLRSDKHPCVT-LALVASMPRVFESVQDKSITKANCKKDSKSFYIKYNFS 137 (420)
Q Consensus 59 ~TpLh~A~~~g~~evv~~Ll~~~~~~~~~~~~~~~~~~~~~-~~li~~~p~~~~~lLD~ci~~~~~~~~~~~~~i~y~f~ 137 (420)
.|.||..+.+-..++-..++.+++. +.....+..+-+|. ++....--++++.++.+- +...=...+-..-.|+..
T Consensus 274 NTVLH~lVi~~~~~My~~~L~~ga~--~l~~v~N~qgLTPLtLAaklGk~emf~~ile~~--k~~~W~YGpvtsslYpL~ 349 (782)
T KOG3676|consen 274 NTVLHMLVIHFVTEMYDLALELGAN--ALEHVRNNQGLTPLTLAAKLGKKEMFQHILERR--KFTDWAYGPVTSSLYPLN 349 (782)
T ss_pred ChHHHHHHHHHHHHHHHHHHhcCCC--ccccccccCCCChHHHHHHhhhHHHHHHHHHhh--cccceeecccccccccch
Confidence 8888888888778888888888776 11111222233332 343334445556666531 000000011111122222
Q ss_pred hccccccccccccccCCCCCCCCCCcchhhHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcccceeeeecch
Q psy8764 138 CLQCLRIYPEINEKTGDATAISKPIPLPALNNTALHLATISHHFYRPTFLDRNLALFFHNCVFVGSNPTPT 208 (420)
Q Consensus 138 ~Lq~p~~~~~~~~~~~~~~~~~~~~pl~~Ln~mv~hLL~~KW~~yg~~~~~~nl~~y~~~~~~lfl~~lT~ 208 (420)
-+|.-.. +.+..+ ---.+.+.+++..+-..++.||..||.+||++.++.++.+|+ ++.+.+|.
T Consensus 350 ~iDT~~n--~~SvLe-ivvyg~~~eHl~Ll~~~i~~LL~~KW~~f~k~~f~~~~~~~~-----~y~i~ft~ 412 (782)
T KOG3676|consen 350 SIDTIGN--ENSVLE-IVVYGIKNEHLELLDGPIEELLEDKWKAFGKKQFFMSLLIYL-----LYMICFTL 412 (782)
T ss_pred hcccccc--hhhhhh-hhhcCCcHHHHHHHhHHHHHHHHHHHHHHhHHHHHHHHHHHH-----HHHHHHHH
Confidence 2221100 000000 000112333444444455558889999999998889999999 99888776
No 7
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.49 E-value=1.6e-13 Score=110.78 Aligned_cols=77 Identities=22% Similarity=0.227 Sum_probs=69.5
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
.|+.++++.|++.+. .++. |+||||+||..|+.+++++|+++|+++ ..|..|+||||+|+.+|+.++++.|+++
T Consensus 7 ~~~~~~~~~ll~~~~-~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~ 81 (89)
T PF12796_consen 7 NGNLEILKFLLEKGA-DINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKLLLEH 81 (89)
T ss_dssp TTTHHHHHHHHHTTS-TTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHCcC-CCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 689999999999664 4554 999999999999999999999999999 8899999999999999999999999998
Q ss_pred CCC
Q psy8764 81 NTR 83 (420)
Q Consensus 81 ~~~ 83 (420)
+..
T Consensus 82 g~~ 84 (89)
T PF12796_consen 82 GAD 84 (89)
T ss_dssp TT-
T ss_pred CCC
Confidence 754
No 8
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.46 E-value=5e-14 Score=105.20 Aligned_cols=55 Identities=25% Similarity=0.248 Sum_probs=33.3
Q ss_pred HHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHH
Q psy8764 11 LNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYA 65 (420)
Q Consensus 11 LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A 65 (420)
||++++.++|.+|..|+||||+||+.|+.++|++|++.|+++ .+|+.|+||||+|
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A 56 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA 56 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence 567776689999999999999999999999999999999999 9999999999998
No 9
>PHA02791 ankyrin-like protein; Provisional
Probab=99.44 E-value=1.1e-12 Score=129.29 Aligned_cols=126 Identities=13% Similarity=0.032 Sum_probs=89.6
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
+|+.++++.|++.++ +++.. +|+||||+|+..|+.++|++|+++|+++ ..|..|.||||+|+.+|+.+++++|+.+
T Consensus 40 ~g~~eiv~~Ll~~ga-~~n~~--d~~TpLh~Aa~~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~ 116 (284)
T PHA02791 40 DNNVRLVCTLLNAGA-LKNLL--ENEFPLHQAATLEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKK 116 (284)
T ss_pred cCCHHHHHHHHHCcC-CCcCC--CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence 588899999998765 55554 4789999999999999999999999998 8888899999999999999999999988
Q ss_pred CCCccchhcccCCCCcc-hHHHHHhhCHHHHHHHhhccccccccCCCCcceeee
Q psy8764 81 NTRGTEIMSLRSDKHPC-VTLALVASMPRVFESVQDKSITKANCKKDSKSFYIK 133 (420)
Q Consensus 81 ~~~~~~~~~~~~~~~~~-~~~~li~~~p~~~~~lLD~ci~~~~~~~~~~~~~i~ 133 (420)
+...+.. ...+..+ .+.+......++++.+++++....+...+.+..|+.
T Consensus 117 gadin~~---~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~g~TpLh~A 167 (284)
T PHA02791 117 NWRLMFY---GKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILLSCIHIT 167 (284)
T ss_pred CCCcCcc---CCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccccccCccHHHHH
Confidence 7543221 1111223 344666777888888887653221111234555555
No 10
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.43 E-value=1.2e-12 Score=134.52 Aligned_cols=112 Identities=15% Similarity=0.078 Sum_probs=54.1
Q ss_pred CCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8764 3 GYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHN 81 (420)
Q Consensus 3 G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~ 81 (420)
|+.++++.|++.|+ +++..|.+|.||||+|+..|+.++|++|+++|+++ ..|..|.||||+|+..|+.++++.|+.++
T Consensus 113 ~~~~iv~~Ll~~ga-d~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~g 191 (413)
T PHA02875 113 KKLDIMKLLIARGA-DPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSG 191 (413)
T ss_pred CCHHHHHHHHhCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 44555555555443 44555555555555555555555555555555555 44555555555555555555555555554
Q ss_pred CCccchhcccCCCCcchHH-HHHhhCHHHHHHHhhccc
Q psy8764 82 TRGTEIMSLRSDKHPCVTL-ALVASMPRVFESVQDKSI 118 (420)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~-~li~~~p~~~~~lLD~ci 118 (420)
....... ..+..+++. +.....+++++.++++..
T Consensus 192 a~~n~~~---~~~~~t~l~~A~~~~~~~iv~~Ll~~ga 226 (413)
T PHA02875 192 ANIDYFG---KNGCVAALCYAIENNKIDIVRLFIKRGA 226 (413)
T ss_pred CCCCcCC---CCCCchHHHHHHHcCCHHHHHHHHHCCc
Confidence 4332211 111122232 444445555555555443
No 11
>PHA02741 hypothetical protein; Provisional
Probab=99.41 E-value=2.3e-12 Score=117.11 Aligned_cols=117 Identities=15% Similarity=0.180 Sum_probs=88.5
Q ss_pred CCCHHHHHHHHhc-----CCCCCCCcCCCCChHHHHHHHcCC----HHHHHHHHHCCCcc-cccC-CCCcHHHHHHHcCC
Q psy8764 2 SGYTNTMVHLNSV-----HSHLLDQVDKDGNTALHLATMENK----PKAICLLLSLNCKL-LYNC-MDLSAIDYAIYYKF 70 (420)
Q Consensus 2 ~G~~e~ve~LL~~-----~~~~in~~D~~G~TpLHlAa~~g~----~~vV~lLL~~Ga~i-~~n~-~g~TpLh~A~~~g~ 70 (420)
.|+.++++.|+.. .+.+++.+|..|+||||+|+..|+ .+++++|+++|+++ .++. .|.||||+|+.+|+
T Consensus 31 ~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~TpLh~A~~~~~ 110 (169)
T PHA02741 31 CGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTALHLAAHRRD 110 (169)
T ss_pred cCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCHHHHHHHcCC
Confidence 5899999988642 234689999999999999999999 58899999999999 7774 89999999999999
Q ss_pred HHHHHHHHhC-CCCccchhcccCCCCcchHHHHHhhCHHHHHHHhhcccccc
Q psy8764 71 PEAALAMVTH-NTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSITKA 121 (420)
Q Consensus 71 ~evv~~Ll~~-~~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lLD~ci~~~ 121 (420)
.++++.|+.. +.+.... +..+.+....+......++++.+++...+.+
T Consensus 111 ~~iv~~Ll~~~g~~~~~~---n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~~ 159 (169)
T PHA02741 111 HDLAEWLCCQPGIDLHFC---NADNKSPFELAIDNEDVAMMQILREIVATSR 159 (169)
T ss_pred HHHHHHHHhCCCCCCCcC---CCCCCCHHHHHHHCCCHHHHHHHHHHHHHhc
Confidence 9999999974 5443321 1222233444556667788877777555443
No 12
>PHA02946 ankyin-like protein; Provisional
Probab=99.41 E-value=2.3e-12 Score=134.60 Aligned_cols=112 Identities=17% Similarity=0.132 Sum_probs=89.6
Q ss_pred CCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCC--HHHHHHHHh
Q psy8764 3 GYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKF--PEAALAMVT 79 (420)
Q Consensus 3 G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~--~evv~~Ll~ 79 (420)
++.++++.|++.++ ++|.+|.+|+||||+||+.|+.++|++|+++||++ .+|..|.||||+|+..++ .+++++|+.
T Consensus 50 ~~~~iv~~Ll~~Ga-dvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~ 128 (446)
T PHA02946 50 LDERFVEELLHRGY-SPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQ 128 (446)
T ss_pred CCHHHHHHHHHCcC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHH
Confidence 46789999999876 79999999999999999999999999999999999 899999999999998764 789999999
Q ss_pred CCCCccchhcccCCCCcchHHHHHhhCHHHHHHHhhccc
Q psy8764 80 HNTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSI 118 (420)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lLD~ci 118 (420)
++....... ...+.+|..+......++++.+++...
T Consensus 129 ~Gadin~~~---d~~g~tpL~aa~~~~~~vv~~Ll~~ga 164 (446)
T PHA02946 129 YGAKINNSV---DEEGCGPLLACTDPSERVFKKIMSIGF 164 (446)
T ss_pred cCCCccccc---CCCCCcHHHHHHCCChHHHHHHHhccc
Confidence 886543211 111344555555566677777776443
No 13
>PHA02791 ankyrin-like protein; Provisional
Probab=99.40 E-value=2e-12 Score=127.39 Aligned_cols=111 Identities=14% Similarity=0.114 Sum_probs=90.3
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
.|+.+++++|++.++ +.+|.+|+||||+|+..|+.++|++|+++|+++ .. +|.||||+|+..|+.++++.|+.+
T Consensus 9 ~~~~~~~~~Lis~~a---~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~--d~~TpLh~Aa~~g~~eiV~lLL~~ 83 (284)
T PHA02791 9 WKSKQLKSFLSSKDA---FKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLL--ENEFPLHQAATLEDTKIVKILLFS 83 (284)
T ss_pred cCHHHHHHHHHhCCC---CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCC--CCCCHHHHHHHCCCHHHHHHHHHC
Confidence 478899999999654 578999999999999999999999999999998 54 378999999999999999999998
Q ss_pred CCCccchhcccCCCCcchHHHHHhhCHHHHHHHhhccccc
Q psy8764 81 NTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSITK 120 (420)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lLD~ci~~ 120 (420)
+...+.. +..+.+..+.+......++++.+++.....
T Consensus 84 Gadvn~~---d~~G~TpLh~Aa~~g~~eivk~Ll~~gadi 120 (284)
T PHA02791 84 GMDDSQF---DDKGNTALYYAVDSGNMQTVKLFVKKNWRL 120 (284)
T ss_pred CCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 7654432 222234456677778889999999876544
No 14
>KOG0512|consensus
Probab=99.39 E-value=7e-13 Score=119.21 Aligned_cols=86 Identities=16% Similarity=0.105 Sum_probs=80.6
Q ss_pred CCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8764 3 GYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHN 81 (420)
Q Consensus 3 G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~ 81 (420)
|....|+.||+..+..+|.+|++|.||||-||.+||.++|+.|+..||+. .+...|+||||-||.+++.+++-.|+.|+
T Consensus 74 nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~va~~LLqhg 153 (228)
T KOG0512|consen 74 NRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEVAGRLLQHG 153 (228)
T ss_pred ccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhHHHHHHhcc
Confidence 56678999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred CCccchh
Q psy8764 82 TRGTEIM 88 (420)
Q Consensus 82 ~~~~~~~ 88 (420)
++.++..
T Consensus 154 aDVnA~t 160 (228)
T KOG0512|consen 154 ADVNAQT 160 (228)
T ss_pred Ccccccc
Confidence 8776653
No 15
>PHA02875 ankyrin repeat protein; Provisional
Probab=99.38 E-value=4.2e-12 Score=130.40 Aligned_cols=113 Identities=19% Similarity=0.154 Sum_probs=64.0
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
+|+.++++.|++.++...+..+.+|+||||+|+..|+.++|++|+++||++ ..+..|.||||.|+..|+.++++.|+.+
T Consensus 78 ~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~ 157 (413)
T PHA02875 78 EGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDH 157 (413)
T ss_pred CCCHHHHHHHHHcCCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 355566666665554333444556666666666666666666666666666 5666666666666666666666666666
Q ss_pred CCCccchhcccCCCCcchHHHHHhhCHHHHHHHhhcc
Q psy8764 81 NTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKS 117 (420)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lLD~c 117 (420)
+...... +..+.+..+.+.....+++++.+++..
T Consensus 158 g~~~~~~---d~~g~TpL~~A~~~g~~eiv~~Ll~~g 191 (413)
T PHA02875 158 KACLDIE---DCCGCTPLIIAMAKGDIAICKMLLDSG 191 (413)
T ss_pred CCCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHhCC
Confidence 5432211 111122233445555566666666543
No 16
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.38 E-value=3.8e-12 Score=126.14 Aligned_cols=84 Identities=10% Similarity=0.079 Sum_probs=75.8
Q ss_pred CCCHHHHHHHHhcCCCCCCCc----CCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cc-cCCCCcHHHHHHHcCCHHHHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQV----DKDGNTALHLATMENKPKAICLLLSLNCKL-LY-NCMDLSAIDYAIYYKFPEAAL 75 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~----D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~-n~~g~TpLh~A~~~g~~evv~ 75 (420)
.|+.++++.|+++|+ ++|.+ |++|.||||+||+.|+.+++++|+++||++ .. +..|.||||.|+.+|+.++++
T Consensus 43 ~~~~eivk~LL~~GA-diN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~~~eivk 121 (300)
T PHA02884 43 FHYTDIIDAILKLGA-DPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHGCLKCLE 121 (300)
T ss_pred cCCHHHHHHHHHCCC-CccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcCCHHHHH
Confidence 589999999999886 78876 468999999999999999999999999999 64 567999999999999999999
Q ss_pred HHHhCCCCccc
Q psy8764 76 AMVTHNTRGTE 86 (420)
Q Consensus 76 ~Ll~~~~~~~~ 86 (420)
+|+.++.....
T Consensus 122 lLL~~GAdin~ 132 (300)
T PHA02884 122 ILLSYGADINI 132 (300)
T ss_pred HHHHCCCCCCC
Confidence 99999876554
No 17
>PHA02795 ankyrin-like protein; Provisional
Probab=99.38 E-value=1.4e-12 Score=134.55 Aligned_cols=81 Identities=12% Similarity=0.020 Sum_probs=55.9
Q ss_pred CCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcC--------CHHH
Q psy8764 3 GYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYK--------FPEA 73 (420)
Q Consensus 3 G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g--------~~ev 73 (420)
|+.++++.|+++++ ++|.+|.+|.||||+|+..|+.++|++|+++||++ ..|..|.||||.|+.+| +.++
T Consensus 199 ~~~eIve~LIs~GA-DIN~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eI 277 (437)
T PHA02795 199 TVLEIYKLCIPYIE-DINQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKI 277 (437)
T ss_pred CHHHHHHHHHhCcC-CcCcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHH
Confidence 45677777777554 56777777777777777777777777777777777 66777777777777766 3567
Q ss_pred HHHHHhCCCCc
Q psy8764 74 ALAMVTHNTRG 84 (420)
Q Consensus 74 v~~Ll~~~~~~ 84 (420)
+++|+.++..-
T Consensus 278 velLL~~gadI 288 (437)
T PHA02795 278 LEILLREPLSI 288 (437)
T ss_pred HHHHHhCCCCC
Confidence 77777665543
No 18
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.36 E-value=1.5e-12 Score=96.18 Aligned_cols=53 Identities=19% Similarity=0.204 Sum_probs=45.5
Q ss_pred CChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHH
Q psy8764 26 GNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMV 78 (420)
Q Consensus 26 G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll 78 (420)
|+||||.||+.|+.+++++|+++|+++ ..|.+|.||||+|+.+|+.+++++|+
T Consensus 1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 799999999999999999999999999 88999999999999999999999985
No 19
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.35 E-value=8.4e-12 Score=131.00 Aligned_cols=125 Identities=14% Similarity=0.061 Sum_probs=94.5
Q ss_pred CHHHHHHHHhcCCCCCCCcCCC-CChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8764 4 YTNTMVHLNSVHSHLLDQVDKD-GNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHN 81 (420)
Q Consensus 4 ~~e~ve~LL~~~~~~in~~D~~-G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~ 81 (420)
+.++++.|++.++ ++|..|.+ |+||||+||.+|+.++|++|+++|+++ ..|..|.||||.|+..|+.++++.|+.++
T Consensus 146 ~~~iv~~Ll~~ga-din~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g 224 (477)
T PHA02878 146 EAEITKLLLSYGA-DINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENG 224 (477)
T ss_pred HHHHHHHHHHcCC-CCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 3569999999776 78888888 999999999999999999999999999 88999999999999999999999999888
Q ss_pred CCccchhcccCCCCcchHH-HHHh-hCHHHHHHHhhccccccccC--CCCcceeee
Q psy8764 82 TRGTEIMSLRSDKHPCVTL-ALVA-SMPRVFESVQDKSITKANCK--KDSKSFYIK 133 (420)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~-~li~-~~p~~~~~lLD~ci~~~~~~--~~~~~~~i~ 133 (420)
...+..+ .. +.+|.. +... ...++++.++++.......+ .+.+..|..
T Consensus 225 a~in~~d---~~-g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A 276 (477)
T PHA02878 225 ASTDARD---KC-GNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS 276 (477)
T ss_pred CCCCCCC---CC-CCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH
Confidence 6544322 11 334443 3333 35788888998776554332 234444444
No 20
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.33 E-value=9.6e-12 Score=112.89 Aligned_cols=109 Identities=16% Similarity=0.158 Sum_probs=83.8
Q ss_pred HHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHH---HHHHHHCCCcc-ccc-CCCCcHHHHHHHcCCHHHHHHHHh-
Q psy8764 6 NTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKA---ICLLLSLNCKL-LYN-CMDLSAIDYAIYYKFPEAALAMVT- 79 (420)
Q Consensus 6 e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~v---V~lLL~~Ga~i-~~n-~~g~TpLh~A~~~g~~evv~~Ll~- 79 (420)
++++.|.+.++ .++..|.+|+||||+||..|+.+. +++|+++|+++ .++ ..|.||||+|+.+|+.+++++|+.
T Consensus 38 ~~~~~l~~~g~-~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~ 116 (166)
T PHA02743 38 EVAPFISGDGH-LLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIAASTKNYELAEWLCRQ 116 (166)
T ss_pred HHHHHHhhcch-hhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhc
Confidence 55666777554 688999999999999999998765 89999999999 777 589999999999999999999995
Q ss_pred CCCCccchhcccCCCCcchHHHHHhhCHHHHHHHhhccc
Q psy8764 80 HNTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSI 118 (420)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lLD~ci 118 (420)
.+...... ...+.+..+.+.....+++++.+++...
T Consensus 117 ~gad~~~~---d~~g~tpL~~A~~~~~~~iv~~Ll~~ga 152 (166)
T PHA02743 117 LGVNLGAI---NYQHETAYHIAYKMRDRRMMEILRANGA 152 (166)
T ss_pred cCCCccCc---CCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 55443322 1222333455666667788888887654
No 21
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.33 E-value=1.1e-11 Score=138.63 Aligned_cols=113 Identities=15% Similarity=0.143 Sum_probs=92.1
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
.|+.++++.|++.+. ++|..|.+|+||||+||.+|+.++|++|+++|+++ ..|.+|.||||.|+..|+.++++.|+..
T Consensus 535 ~g~~~~l~~Ll~~G~-d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~ 613 (823)
T PLN03192 535 TGNAALLEELLKAKL-DPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHF 613 (823)
T ss_pred cCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhc
Confidence 589999999999776 79999999999999999999999999999999999 8999999999999999999999999876
Q ss_pred CCCccchhcccCCCCcchHHHHHhhCHHHHHHHhhccccc
Q psy8764 81 NTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSITK 120 (420)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lLD~ci~~ 120 (420)
+..... .......+.+...+..++++.++++....
T Consensus 614 ~~~~~~-----~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadi 648 (823)
T PLN03192 614 ASISDP-----HAAGDLLCTAAKRNDLTAMKELLKQGLNV 648 (823)
T ss_pred CcccCc-----ccCchHHHHHHHhCCHHHHHHHHHCCCCC
Confidence 542211 11122344555666677777777766544
No 22
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.32 E-value=8.1e-12 Score=111.29 Aligned_cols=76 Identities=13% Similarity=0.055 Sum_probs=57.3
Q ss_pred HHHHHHHhcCCCCCCCcC-CCCChHHHHHHHcCCHHHHHHHHH-CCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy8764 6 NTMVHLNSVHSHLLDQVD-KDGNTALHLATMENKPKAICLLLS-LNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHNT 82 (420)
Q Consensus 6 e~ve~LL~~~~~~in~~D-~~G~TpLHlAa~~g~~~vV~lLL~-~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~ 82 (420)
++++.|++.++ ++|.+| .+|+||||+|++.|+.+++++|++ .|+++ ..|..|.||||+|+..|+.+++++|+.++.
T Consensus 72 e~v~~Ll~~ga-din~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga 150 (154)
T PHA02736 72 EKLKLLMEWGA-DINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGA 150 (154)
T ss_pred HHHHHHHHcCC-CccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 45677777665 677776 478888888888888888888876 47777 777778888888888888888887777664
No 23
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.31 E-value=3.1e-11 Score=113.66 Aligned_cols=77 Identities=9% Similarity=0.113 Sum_probs=37.1
Q ss_pred CCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcC--CHHHHHHHHHCCCcc-ccc-CCCCcHHHHHHHc---CCHHHHH
Q psy8764 3 GYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMEN--KPKAICLLLSLNCKL-LYN-CMDLSAIDYAIYY---KFPEAAL 75 (420)
Q Consensus 3 G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g--~~~vV~lLL~~Ga~i-~~n-~~g~TpLh~A~~~---g~~evv~ 75 (420)
|+.++++.|++. +|..|..|.||||+|+.+| +.+++++|+++|+++ ..+ ..|.||||.|+.. ++.++++
T Consensus 32 ~~~~~vk~Li~~----~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~ 107 (209)
T PHA02859 32 DDIEGVKKWIKF----VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILK 107 (209)
T ss_pred CcHHHHHHHHHh----hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHH
Confidence 455555555532 2344455555555555432 455555555555555 333 3455555554432 2455555
Q ss_pred HHHhCCCC
Q psy8764 76 AMVTHNTR 83 (420)
Q Consensus 76 ~Ll~~~~~ 83 (420)
+|+.++..
T Consensus 108 ~Ll~~gad 115 (209)
T PHA02859 108 ILIDSGSS 115 (209)
T ss_pred HHHHCCCC
Confidence 55554443
No 24
>KOG0509|consensus
Probab=99.31 E-value=9.3e-12 Score=130.38 Aligned_cols=82 Identities=16% Similarity=0.174 Sum_probs=63.0
Q ss_pred CCCCHHHHHHHHhcCCCCCCCcC-CCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHH
Q psy8764 1 MSGYTNTMVHLNSVHSHLLDQVD-KDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMV 78 (420)
Q Consensus 1 m~G~~e~ve~LL~~~~~~in~~D-~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll 78 (420)
+|++.+++++|+++++ ++|..+ .-|.||||+||++||..+|.+|+++|||+ ++|.+|.||+|+|+..|+.-.+.+++
T Consensus 87 iNNrl~v~r~li~~ga-dvn~~gG~l~stPLHWAar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll 165 (600)
T KOG0509|consen 87 INNRLDVARYLISHGA-DVNAIGGVLGSTPLHWAARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLL 165 (600)
T ss_pred HcCcHHHHHHHHHcCC-CccccCCCCCCCcchHHHHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHH
Confidence 4667778888887765 677776 66778888888888888888888888888 77888888888888888888887777
Q ss_pred hCCCC
Q psy8764 79 THNTR 83 (420)
Q Consensus 79 ~~~~~ 83 (420)
.++..
T Consensus 166 ~~~~d 170 (600)
T KOG0509|consen 166 SKGAD 170 (600)
T ss_pred Hhccc
Confidence 77643
No 25
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.31 E-value=1.8e-11 Score=126.97 Aligned_cols=113 Identities=12% Similarity=0.038 Sum_probs=88.7
Q ss_pred CCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8764 3 GYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHN 81 (420)
Q Consensus 3 G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~ 81 (420)
+..++++.|++.+. +++..|..|.||||+|+..|+.++|++|+++|+++ ..|..|.||||+|+.+|+.+++++|+.++
T Consensus 102 ~~~~~i~~ll~~g~-d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g 180 (434)
T PHA02874 102 IEKDMIKTILDCGI-DVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKG 180 (434)
T ss_pred CCHHHHHHHHHCcC-CCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCC
Confidence 45688888998765 68888999999999999999999999999999999 88888999999999999999999999887
Q ss_pred CCccchhcccCCCCcchHHHHHhhCHHHHHHHhhcccc
Q psy8764 82 TRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSIT 119 (420)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lLD~ci~ 119 (420)
...... +..+.+..+.+......++++.+++....
T Consensus 181 ~~~n~~---~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~ 215 (434)
T PHA02874 181 AYANVK---DNNGESPLHNAAEYGDYACIKLLIDHGNH 215 (434)
T ss_pred CCCCCC---CCCCCCHHHHHHHcCCHHHHHHHHhCCCC
Confidence 654322 11223334456666778888888887654
No 26
>PHA02878 ankyrin repeat protein; Provisional
Probab=99.31 E-value=1.5e-11 Score=129.07 Aligned_cols=113 Identities=12% Similarity=0.029 Sum_probs=94.5
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHc-CCHHHHHHHHh
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYY-KFPEAALAMVT 79 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~-g~~evv~~Ll~ 79 (420)
+|+.++++.|++.++ ++|..|..|+||||+|++.|+.+++++|+++|+++ ..|..|.||||+|+.. ++.+++++|+.
T Consensus 178 ~~~~~iv~~Ll~~ga-d~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~ 256 (477)
T PHA02878 178 NKDQRLTELLLSYGA-NVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLE 256 (477)
T ss_pred CCCHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHH
Confidence 689999999999876 79999999999999999999999999999999999 9999999999999975 78999999999
Q ss_pred CCCCccchhcccCCCCcchHHHHHhhCHHHHHHHhhcccc
Q psy8764 80 HNTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSIT 119 (420)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lLD~ci~ 119 (420)
++...+... ...+.+|..-. ...+++++.+++....
T Consensus 257 ~gadvn~~~---~~~g~TpLh~A-~~~~~~v~~Ll~~gad 292 (477)
T PHA02878 257 HGVDVNAKS---YILGLTALHSS-IKSERKLKLLLEYGAD 292 (477)
T ss_pred cCCCCCccC---CCCCCCHHHHH-ccCHHHHHHHHHCCCC
Confidence 987655432 11134444433 5678899999986653
No 27
>KOG0508|consensus
Probab=99.28 E-value=6.1e-12 Score=127.56 Aligned_cols=109 Identities=13% Similarity=0.092 Sum_probs=86.2
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
-||.+++++|+++++ +++..|..|+|.||+||..||.+++++|++.|||+ .++.+|.||||.|++.|+.|++++|+.+
T Consensus 127 DG~leivKyLvE~ga-d~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ 205 (615)
T KOG0508|consen 127 DGHLEIVKYLVEHGA-DPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKH 205 (615)
T ss_pred cchhHHHHHHHHcCC-CCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhC
Confidence 589999999998665 78889999999999999999999999999999999 8889999999999999999999999988
Q ss_pred CCCccchhcccCCCCcchH-HHHHhhCHHHHHHHhhc
Q psy8764 81 NTRGTEIMSLRSDKHPCVT-LALVASMPRVFESVQDK 116 (420)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~-~~li~~~p~~~~~lLD~ 116 (420)
+.... .+.. +.+|. .+-+...-++++.+++.
T Consensus 206 ga~i~----~d~~-GmtPL~~Aa~tG~~~iVe~L~~~ 237 (615)
T KOG0508|consen 206 GAKID----VDGH-GMTPLLLAAVTGHTDIVERLLQC 237 (615)
T ss_pred Cceee----ecCC-CCchHHHHhhhcchHHHHHHhcC
Confidence 75321 1111 23333 34556666777777763
No 28
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.27 E-value=1.8e-11 Score=111.08 Aligned_cols=79 Identities=16% Similarity=0.108 Sum_probs=71.5
Q ss_pred HHHHHHHhcCCCCCCCcC-CCCChHHHHHHHcCCHHHHHHHHH-CCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy8764 6 NTMVHLNSVHSHLLDQVD-KDGNTALHLATMENKPKAICLLLS-LNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHNT 82 (420)
Q Consensus 6 e~ve~LL~~~~~~in~~D-~~G~TpLHlAa~~g~~~vV~lLL~-~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~ 82 (420)
+++++|++.++ ++|.+| ..|+||||+|+..|+.+++++|++ .|+++ ..|..|.||||+|+..|+.+++++|+.++.
T Consensus 74 ~~i~~Ll~~Ga-din~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga 152 (166)
T PHA02743 74 MKIELLVNMGA-DINARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGA 152 (166)
T ss_pred HHHHHHHHcCC-CCCCCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 34789999776 789988 589999999999999999999995 79999 899999999999999999999999999876
Q ss_pred Ccc
Q psy8764 83 RGT 85 (420)
Q Consensus 83 ~~~ 85 (420)
...
T Consensus 153 ~~~ 155 (166)
T PHA02743 153 VCD 155 (166)
T ss_pred CCC
Confidence 544
No 29
>PHA02874 ankyrin repeat protein; Provisional
Probab=99.27 E-value=5e-11 Score=123.62 Aligned_cols=108 Identities=15% Similarity=0.058 Sum_probs=87.8
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
.|+.++++.|++.++ ++|..|.+|.||||+|+..|+.+++++|+++|+++ ..|..|.||||+|+..|+.++++.|+.+
T Consensus 134 ~~~~~~v~~Ll~~ga-d~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~ 212 (434)
T PHA02874 134 KGDLESIKMLFEYGA-DVNIEDDNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDH 212 (434)
T ss_pred CCCHHHHHHHHhCCC-CCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC
Confidence 589999999999776 78999999999999999999999999999999999 8899999999999999999999999998
Q ss_pred CCCccchhcccCCCCcchHHHHHhhCHHHHHHHh
Q psy8764 81 NTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQ 114 (420)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lL 114 (420)
+...... . ..+.+|....+..-.+..+.++
T Consensus 213 g~~i~~~---~-~~g~TpL~~A~~~~~~~i~~Ll 242 (434)
T PHA02874 213 GNHIMNK---C-KNGFTPLHNAIIHNRSAIELLI 242 (434)
T ss_pred CCCCcCC---C-CCCCCHHHHHHHCChHHHHHHH
Confidence 8653321 1 1234455444444444555554
No 30
>KOG0514|consensus
Probab=99.26 E-value=2.4e-11 Score=120.01 Aligned_cols=106 Identities=15% Similarity=0.136 Sum_probs=81.6
Q ss_pred CHHHHHHHHhcCCCCCCC-cCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8764 4 YTNTMVHLNSVHSHLLDQ-VDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHN 81 (420)
Q Consensus 4 ~~e~ve~LL~~~~~~in~-~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~ 81 (420)
+.++|+.|...+ ++|. ....|.||||+|+.+|..++|+.||.-|||+ +.|.+|.|+|+.|+++||+|++++|+.+.
T Consensus 319 d~~vV~~LF~mg--nVNaKAsQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p 396 (452)
T KOG0514|consen 319 DRTVVERLFKMG--DVNAKASQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVP 396 (452)
T ss_pred hHHHHHHHHhcc--CcchhhhhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccC
Confidence 345666666654 2443 3456999999999999999999999999999 99999999999999999999999999988
Q ss_pred CCccchhcccCCCCcchHHHHHhhCHHHHHHH
Q psy8764 82 TRGTEIMSLRSDKHPCVTLALVASMPRVFESV 113 (420)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~l 113 (420)
.+...+. +.++.+....++.....+++..+
T Consensus 397 ~cd~sLt--D~DgSTAl~IAleagh~eIa~ml 426 (452)
T KOG0514|consen 397 SCDISLT--DVDGSTALSIALEAGHREIAVML 426 (452)
T ss_pred cccceee--cCCCchhhhhHHhcCchHHHHHH
Confidence 7765543 33334445566666666665443
No 31
>PHA03095 ankyrin-like protein; Provisional
Probab=99.25 E-value=4.8e-11 Score=124.24 Aligned_cols=113 Identities=17% Similarity=0.148 Sum_probs=89.0
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCH--HHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKP--KAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMV 78 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~--~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll 78 (420)
.++.++++.|++.+. +++.+|..|+||||+||..|+. .+++.|+++|+++ ..|..|.||||+|+..|+.++++.|+
T Consensus 199 ~~~~~i~~~Ll~~g~-~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh~A~~~~~~~~v~~LL 277 (471)
T PHA03095 199 KPRARIVRELIRAGC-DPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLI 277 (471)
T ss_pred CCcHHHHHHHHHcCC-CCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 366788888888765 6888899999999999998875 5788889999999 88899999999999999999999999
Q ss_pred hCCCCccchhcccCCCCcchHHHHHhhCHHHHHHHhhccc
Q psy8764 79 THNTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSI 118 (420)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lLD~ci 118 (420)
.+++...... .++.++...+.....++.++.+++++.
T Consensus 278 ~~gad~n~~~---~~g~tpl~~A~~~~~~~~v~~LL~~~~ 314 (471)
T PHA03095 278 ALGADINAVS---SDGNTPLSLMVRNNNGRAVRAALAKNP 314 (471)
T ss_pred HcCCCCcccC---CCCCCHHHHHHHhCCHHHHHHHHHhCC
Confidence 8887554332 222344556677778888888887553
No 32
>PHA03095 ankyrin-like protein; Provisional
Probab=99.25 E-value=5.9e-11 Score=123.57 Aligned_cols=114 Identities=11% Similarity=0.074 Sum_probs=84.3
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcC---CHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcC-CHHHHHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMEN---KPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYK-FPEAALA 76 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g---~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g-~~evv~~ 76 (420)
.++.++++.|++.++ ++|..|..|.||||+|+..| +.+++++|+++|+++ ..+..|.||||+|+.+| +.+++++
T Consensus 24 ~~~~~~v~~Ll~~ga-~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~l 102 (471)
T PHA03095 24 NVTVEEVRRLLAAGA-DVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKL 102 (471)
T ss_pred CCCHHHHHHHHHcCC-CcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHH
Confidence 467888888888765 68888888899999988888 888899999999888 78888899999999888 5888888
Q ss_pred HHhCCCCccchhcccCCCCcchHHHHH---hhCHHHHHHHhhccccc
Q psy8764 77 MVTHNTRGTEIMSLRSDKHPCVTLALV---ASMPRVFESVQDKSITK 120 (420)
Q Consensus 77 Ll~~~~~~~~~~~~~~~~~~~~~~~li---~~~p~~~~~lLD~ci~~ 120 (420)
|+.++....... ..+.+|....+ ...+++++.++++....
T Consensus 103 Ll~~ga~in~~~----~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~ 145 (471)
T PHA03095 103 LIKAGADVNAKD----KVGRTPLHVYLSGFNINPKVIRLLLRKGADV 145 (471)
T ss_pred HHHcCCCCCCCC----CCCCCHHHHHhhCCcCCHHHHHHHHHcCCCC
Confidence 888876543322 11333443333 22467777888766543
No 33
>PHA02798 ankyrin-like protein; Provisional
Probab=99.24 E-value=5.3e-11 Score=125.49 Aligned_cols=76 Identities=9% Similarity=0.103 Sum_probs=39.7
Q ss_pred HHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcC---CHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCC---HHHHHHH
Q psy8764 5 TNTMVHLNSVHSHLLDQVDKDGNTALHLATMEN---KPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKF---PEAALAM 77 (420)
Q Consensus 5 ~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g---~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~---~evv~~L 77 (420)
.++++.|++.|+ ++|.+|.+|+||||+|+.+| +.+++++|+++||++ ..|..|.||||+|+..|+ .+++++|
T Consensus 89 ~~iv~~Ll~~Ga-diN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~L 167 (489)
T PHA02798 89 LDIVKILIENGA-DINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLL 167 (489)
T ss_pred HHHHHHHHHCCC-CCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHH
Confidence 455555555443 45555555555555555543 445555555555555 555555555555555554 5555555
Q ss_pred HhCC
Q psy8764 78 VTHN 81 (420)
Q Consensus 78 l~~~ 81 (420)
+.++
T Consensus 168 l~~g 171 (489)
T PHA02798 168 LEKG 171 (489)
T ss_pred HHhC
Confidence 5544
No 34
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.24 E-value=5.4e-11 Score=124.25 Aligned_cols=114 Identities=11% Similarity=0.032 Sum_probs=74.8
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHH--HcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcC--CHHHHHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLAT--MENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYK--FPEAALA 76 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa--~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g--~~evv~~ 76 (420)
+|+.++++.|++.++ +++..|..|.||||+|+ ..|+.++|++|+++|+++ ..+..|.||||.|+..| +.++++.
T Consensus 83 ~~~~~iv~~Ll~~ga-~i~~~d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~iv~~ 161 (480)
T PHA03100 83 TDVKEIVKLLLEYGA-NVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKIDLKILKL 161 (480)
T ss_pred hchHHHHHHHHHCCC-CCCCCCCCCCchhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCChHHHHHH
Confidence 466777777777665 45777777777777777 777777777777777777 66777777777777777 7777777
Q ss_pred HHhCCCCccchhcccCCCCcchHHHHHhhCHHHHHHHhhcccc
Q psy8764 77 MVTHNTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSIT 119 (420)
Q Consensus 77 Ll~~~~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lLD~ci~ 119 (420)
|+.++....... ..+.+..+.++.....++++.++++...
T Consensus 162 Ll~~g~din~~d---~~g~tpL~~A~~~~~~~iv~~Ll~~ga~ 201 (480)
T PHA03100 162 LIDKGVDINAKN---RYGYTPLHIAVEKGNIDVIKFLLDNGAD 201 (480)
T ss_pred HHHCCCCccccc---CCCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 777765433221 1112223345555567777777765543
No 35
>PHA02741 hypothetical protein; Provisional
Probab=99.24 E-value=3.4e-11 Score=109.38 Aligned_cols=77 Identities=19% Similarity=0.177 Sum_probs=70.2
Q ss_pred HHHHHHHHhcCCCCCCCcCC-CCChHHHHHHHcCCHHHHHHHHH-CCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8764 5 TNTMVHLNSVHSHLLDQVDK-DGNTALHLATMENKPKAICLLLS-LNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHN 81 (420)
Q Consensus 5 ~e~ve~LL~~~~~~in~~D~-~G~TpLHlAa~~g~~~vV~lLL~-~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~ 81 (420)
.+++++|++.++ ++|..|. +|+||||+|++.|+.+++++|++ .|+++ ..|..|.||||+|+..|+.++++.|+...
T Consensus 77 ~~ii~~Ll~~ga-din~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~ 155 (169)
T PHA02741 77 AEIIDHLIELGA-DINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIV 155 (169)
T ss_pred HHHHHHHHHcCC-CCCCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHH
Confidence 588999999776 6888885 99999999999999999999997 59999 89999999999999999999999998764
Q ss_pred C
Q psy8764 82 T 82 (420)
Q Consensus 82 ~ 82 (420)
+
T Consensus 156 ~ 156 (169)
T PHA02741 156 A 156 (169)
T ss_pred H
Confidence 3
No 36
>PHA02798 ankyrin-like protein; Provisional
Probab=99.24 E-value=5.8e-11 Score=125.18 Aligned_cols=114 Identities=11% Similarity=0.062 Sum_probs=92.7
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHc-----CCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcC---CHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATME-----NKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYK---FPE 72 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~-----g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g---~~e 72 (420)
.++.++++.|+++|+ ++|..|..|.||||.|+.+ |+.+++++|+++||++ ..|..|.||||.|+.+| +.+
T Consensus 48 ~~~~~iv~~Ll~~Ga-dvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~ 126 (489)
T PHA02798 48 SPSTDIVKLFINLGA-NVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLE 126 (489)
T ss_pred CCCHHHHHHHHHCCC-CCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHH
Confidence 367899999999876 8999999999999999875 7799999999999999 99999999999999986 789
Q ss_pred HHHHHHhCCCCccchhcccCCCCcchHH-HHHhhC---HHHHHHHhhccccc
Q psy8764 73 AALAMVTHNTRGTEIMSLRSDKHPCVTL-ALVASM---PRVFESVQDKSITK 120 (420)
Q Consensus 73 vv~~Ll~~~~~~~~~~~~~~~~~~~~~~-~li~~~---p~~~~~lLD~ci~~ 120 (420)
++++|+++|+.....+ . .+.+|.. ++.... +++++.++++.+..
T Consensus 127 iv~~Ll~~Gadvn~~d---~-~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadi 174 (489)
T PHA02798 127 ILLFMIENGADTTLLD---K-DGFTMLQVYLQSNHHIDIEIIKLLLEKGVDI 174 (489)
T ss_pred HHHHHHHcCCCccccC---C-CCCcHHHHHHHcCCcchHHHHHHHHHhCCCc
Confidence 9999999987654432 1 1334443 344444 78889999877644
No 37
>KOG0509|consensus
Probab=99.22 E-value=5.3e-11 Score=124.75 Aligned_cols=87 Identities=17% Similarity=0.207 Sum_probs=79.8
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-ccc-CCCCcHHHHHHHcCCHHHHHHHHh
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYN-CMDLSAIDYAIYYKFPEAALAMVT 79 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n-~~g~TpLh~A~~~g~~evv~~Ll~ 79 (420)
.|..+.|+.|++.....+++.|++|-|+||.||.||..+++++|+++||++ ... .-|.||||.|+++|+..+|.+|++
T Consensus 54 ~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G~~~vv~lLlq 133 (600)
T KOG0509|consen 54 YGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNGHISVVDLLLQ 133 (600)
T ss_pred cchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcCcHHHHHHHHH
Confidence 589999999999845589999999999999999999999999999999999 544 789999999999999999999999
Q ss_pred CCCCccchh
Q psy8764 80 HNTRGTEIM 88 (420)
Q Consensus 80 ~~~~~~~~~ 88 (420)
||++.+..+
T Consensus 134 hGAdpt~~D 142 (600)
T KOG0509|consen 134 HGADPTLKD 142 (600)
T ss_pred cCCCCceec
Confidence 999877654
No 38
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.22 E-value=6.2e-11 Score=111.57 Aligned_cols=114 Identities=10% Similarity=0.014 Sum_probs=90.6
Q ss_pred CCHHHHHHHHhcCCCCCCCcC-CCCChHHHHHHHc---CCHHHHHHHHHCCCcc-cccCCCCcHHHHHHH--cCCHHHHH
Q psy8764 3 GYTNTMVHLNSVHSHLLDQVD-KDGNTALHLATME---NKPKAICLLLSLNCKL-LYNCMDLSAIDYAIY--YKFPEAAL 75 (420)
Q Consensus 3 G~~e~ve~LL~~~~~~in~~D-~~G~TpLHlAa~~---g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~--~g~~evv~ 75 (420)
|+.+++++|++.++ ++|..| .+|.||||+|+.. |+.+++++|+++|+++ ..|..|.||||.|+. +++.++++
T Consensus 64 ~~~eiv~~Ll~~ga-dvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~ 142 (209)
T PHA02859 64 VNVEILKFLIENGA-DVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIK 142 (209)
T ss_pred CCHHHHHHHHHCCC-CCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHH
Confidence 68999999999876 788886 5899999998864 5899999999999999 999999999999986 47899999
Q ss_pred HHHhCCCCccchhcccCCCCcchHH-H-HHhhCHHHHHHHhhcccccc
Q psy8764 76 AMVTHNTRGTEIMSLRSDKHPCVTL-A-LVASMPRVFESVQDKSITKA 121 (420)
Q Consensus 76 ~Ll~~~~~~~~~~~~~~~~~~~~~~-~-li~~~p~~~~~lLD~ci~~~ 121 (420)
+|+.++......+ .. +.+|+. . .....+++++.+++......
T Consensus 143 ~Li~~gadin~~d---~~-g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~ 186 (209)
T PHA02859 143 LLIDSGVSFLNKD---FD-NNNILYSYILFHSDKKIFDFLTSLGIDIN 186 (209)
T ss_pred HHHHcCCCccccc---CC-CCcHHHHHHHhcCCHHHHHHHHHcCCCCC
Confidence 9999987654432 22 334443 2 33457888899998765443
No 39
>PHA03100 ankyrin repeat protein; Provisional
Probab=99.22 E-value=7.7e-11 Score=123.10 Aligned_cols=113 Identities=13% Similarity=0.069 Sum_probs=81.6
Q ss_pred CHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCC------CcHHHHHHHcCC--HHHH
Q psy8764 4 YTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMD------LSAIDYAIYYKF--PEAA 74 (420)
Q Consensus 4 ~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g------~TpLh~A~~~g~--~evv 74 (420)
+.++++.|++.++ ++|..|..|.||||+|+..|+.+++++|+++|+++ ..+..| .||||.|+..|+ .+++
T Consensus 155 ~~~iv~~Ll~~g~-din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv 233 (480)
T PHA03100 155 DLKILKLLIDKGV-DINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVV 233 (480)
T ss_pred hHHHHHHHHHCCC-CcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHH
Confidence 7888888888765 67888888888888888888888888888888888 667777 788888888888 8888
Q ss_pred HHHHhCCCCccchhcccCCCCcchHHHHHhhCHHHHHHHhhccccc
Q psy8764 75 LAMVTHNTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSITK 120 (420)
Q Consensus 75 ~~Ll~~~~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lLD~ci~~ 120 (420)
+.|+.++......+ ..+.+..+.+.....+++++.+++.....
T Consensus 234 ~~Ll~~g~din~~d---~~g~TpL~~A~~~~~~~iv~~Ll~~gad~ 276 (480)
T PHA03100 234 NYLLSYGVPINIKD---VYGFTPLHYAVYNNNPEFVKYLLDLGANP 276 (480)
T ss_pred HHHHHcCCCCCCCC---CCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 88887765433221 11122234455556677777777776633
No 40
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.20 E-value=1.2e-10 Score=127.76 Aligned_cols=62 Identities=13% Similarity=0.052 Sum_probs=44.6
Q ss_pred CCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCC--HHHHHHHHHCCCcc-cccCCCCcHHHHH
Q psy8764 3 GYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENK--PKAICLLLSLNCKL-LYNCMDLSAIDYA 65 (420)
Q Consensus 3 G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~--~~vV~lLL~~Ga~i-~~n~~g~TpLh~A 65 (420)
|+.+++++|++.|+ ++|.+|.+|+||||+|++.|+ .++|++|+++||++ .+|..|+||||.|
T Consensus 190 ~~~eIVklLLe~GA-DVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~GADVN~kD~~G~TPLh~A 254 (764)
T PHA02716 190 VDIDILEWLCNNGV-NVNLQNNHLITPLHTYLITGNVCASVIKKIIELGGDMDMKCVNGMSPIMTY 254 (764)
T ss_pred CCHHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHH
Confidence 55677777777654 677777777777777777774 47777777777777 6777777777765
No 41
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.20 E-value=5.7e-11 Score=129.91 Aligned_cols=78 Identities=22% Similarity=0.209 Sum_probs=75.1
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
+|+.++++.|++.++ ++|..|.+|+||||+||.+|+.++|++|+++|+++ ..|..|.||||+|+.+|+.+++++|+.+
T Consensus 92 ~G~~~~vk~LL~~Ga-din~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~ 170 (664)
T PTZ00322 92 SGDAVGARILLTGGA-DPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRH 170 (664)
T ss_pred cCCHHHHHHHHHCCC-CCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhC
Confidence 689999999999776 79999999999999999999999999999999999 9999999999999999999999999988
No 42
>KOG0195|consensus
Probab=99.20 E-value=2.4e-11 Score=116.81 Aligned_cols=80 Identities=19% Similarity=0.276 Sum_probs=75.9
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
+||..++|.||+.++ -+|.++....||||+||.+||.++|+-||+..+|+ ..|..|.||||+||.+|...+++-|+..
T Consensus 44 egh~aivemll~rga-rvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwgydqiaedli~~ 122 (448)
T KOG0195|consen 44 EGHVAIVEMLLSRGA-RVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISC 122 (448)
T ss_pred cccHHHHHHHHhccc-ccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhc
Confidence 699999999999887 69999999999999999999999999999999999 9999999999999999999999999987
Q ss_pred CC
Q psy8764 81 NT 82 (420)
Q Consensus 81 ~~ 82 (420)
++
T Consensus 123 ga 124 (448)
T KOG0195|consen 123 GA 124 (448)
T ss_pred cc
Confidence 75
No 43
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.19 E-value=1.7e-10 Score=126.46 Aligned_cols=80 Identities=20% Similarity=0.161 Sum_probs=75.1
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
.|+.+++++|++.++ ++|..|..|+||||+||+.|+.++|++|+++||++ ..+..|.||||.|+..|+.++++.|+.+
T Consensus 155 ~~~~~i~k~Ll~~Ga-dvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~ 233 (682)
T PHA02876 155 QDELLIAEMLLEGGA-DVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDN 233 (682)
T ss_pred CCcHHHHHHHHhCCC-CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence 588999999999876 79999999999999999999999999999999999 8899999999999999999999999876
Q ss_pred CC
Q psy8764 81 NT 82 (420)
Q Consensus 81 ~~ 82 (420)
+.
T Consensus 234 ~~ 235 (682)
T PHA02876 234 RS 235 (682)
T ss_pred CC
Confidence 54
No 44
>KOG0508|consensus
Probab=99.18 E-value=4.1e-11 Score=121.64 Aligned_cols=78 Identities=17% Similarity=0.137 Sum_probs=74.2
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKLLYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
.||++++++|++.++ ++|.++..|+||||.||..||.+++++|+++|+.+..|..|.|||..|+..|+.++|+.|+..
T Consensus 160 kGh~~I~qyLle~gA-Dvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~d~~GmtPL~~Aa~tG~~~iVe~L~~~ 237 (615)
T KOG0508|consen 160 KGHVDIAQYLLEQGA-DVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDVDGHGMTPLLLAAVTGHTDIVERLLQC 237 (615)
T ss_pred cCchHHHHHHHHhCC-CcchhcccCchHHHhhhhcccHHHHHHHHhCCceeeecCCCCchHHHHhhhcchHHHHHHhcC
Confidence 699999999999887 899999999999999999999999999999999997788899999999999999999999953
No 45
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.17 E-value=2.1e-10 Score=121.09 Aligned_cols=114 Identities=10% Similarity=0.001 Sum_probs=79.4
Q ss_pred CCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHc---CCHHHHHHHHHCCCcc--cccCCCCcHHHHHHHc--CCHHHHH
Q psy8764 3 GYTNTMVHLNSVHSHLLDQVDKDGNTALHLATME---NKPKAICLLLSLNCKL--LYNCMDLSAIDYAIYY--KFPEAAL 75 (420)
Q Consensus 3 G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~---g~~~vV~lLL~~Ga~i--~~n~~g~TpLh~A~~~--g~~evv~ 75 (420)
|+.+++++|++.|+ ++|.+|.+|.||||.|+.+ |+.++|++|+++||++ ..|..|.||||+|+.. ++.++++
T Consensus 86 ~~~~iv~~Ll~~Ga-din~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~ 164 (494)
T PHA02989 86 KIKKIVKLLLKFGA-DINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIK 164 (494)
T ss_pred hHHHHHHHHHHCCC-CCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHH
Confidence 56788888888765 6888888888888877655 6788888888888888 5778888888888754 5788888
Q ss_pred HHHhCCCCccchhcccCCCCcchHHHHHh-----hCHHHHHHHhhccccc
Q psy8764 76 AMVTHNTRGTEIMSLRSDKHPCVTLALVA-----SMPRVFESVQDKSITK 120 (420)
Q Consensus 76 ~Ll~~~~~~~~~~~~~~~~~~~~~~~li~-----~~p~~~~~lLD~ci~~ 120 (420)
+|++++....... ...+.+|...... ...++++.++++....
T Consensus 165 ~Ll~~Gadi~~~~---~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~v 211 (494)
T PHA02989 165 ILLSFGVNLFEKT---SLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNI 211 (494)
T ss_pred HHHHcCCCccccc---cccCCChHHHHHhcccccccHHHHHHHHhCCCCc
Confidence 8888876543311 1112334322221 2467778888766543
No 46
>KOG0514|consensus
Probab=99.16 E-value=5.6e-11 Score=117.45 Aligned_cols=78 Identities=24% Similarity=0.339 Sum_probs=72.9
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHC-CCcc-cccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSL-NCKL-LYNCMDLSAIDYAIYYKFPEAALAMVT 79 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~-Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~ 79 (420)
.|.+++|+.||.+++ ++|.+|++|.||||.||.+||.|+|++||.. +||+ +.|.+|.|+|.+|-+.||.|++-+|-.
T Consensus 350 HGr~d~vk~LLacgA-dVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa 428 (452)
T KOG0514|consen 350 HGRVDMVKALLACGA-DVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYA 428 (452)
T ss_pred cCcHHHHHHHHHccC-CCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHHHHHH
Confidence 589999999999987 8999999999999999999999999999965 8999 999999999999999999999888754
Q ss_pred C
Q psy8764 80 H 80 (420)
Q Consensus 80 ~ 80 (420)
|
T Consensus 429 ~ 429 (452)
T KOG0514|consen 429 H 429 (452)
T ss_pred H
Confidence 4
No 47
>PHA02989 ankyrin repeat protein; Provisional
Probab=99.15 E-value=1e-10 Score=123.44 Aligned_cols=75 Identities=15% Similarity=0.117 Sum_probs=59.1
Q ss_pred HHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy8764 6 NTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHNT 82 (420)
Q Consensus 6 e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~ 82 (420)
+++++|++ + .++|.+|.+|+||||+||..|+.++|++|+++||++ ..|..|.||||+|+.+|+.++++.|+..+.
T Consensus 238 ~il~~l~~-~-advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p 313 (494)
T PHA02989 238 KVLNFILK-Y-IKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKP 313 (494)
T ss_pred HHHHHHHh-C-CCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCC
Confidence 44444433 2 356777888888888888888888888888888888 888888888888888888888888887654
No 48
>KOG4214|consensus
Probab=99.14 E-value=9.3e-11 Score=95.57 Aligned_cols=82 Identities=12% Similarity=0.178 Sum_probs=74.0
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
||..+-|+.....+- ++|.+- .|+||||+||..|..++.++|+..||++ .+|+.|-|||--|+-.||.++|++|+..
T Consensus 12 NG~~DeVk~~v~~g~-nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~ 89 (117)
T KOG4214|consen 12 NGEIDEVKQSVNEGL-NVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQN 89 (117)
T ss_pred cCcHHHHHHHHHccc-cHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHc
Confidence 788888998887663 566554 8999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCCcc
Q psy8764 81 NTRGT 85 (420)
Q Consensus 81 ~~~~~ 85 (420)
++...
T Consensus 90 GAdrt 94 (117)
T KOG4214|consen 90 GADRT 94 (117)
T ss_pred Ccccc
Confidence 87644
No 49
>KOG4177|consensus
Probab=99.14 E-value=1.2e-10 Score=130.71 Aligned_cols=85 Identities=14% Similarity=0.109 Sum_probs=66.5
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
.|++.+++.+++++. .+|.++.+|.||||.||..|+.++|++||++||++ .+++.|+||||.|+..|+.+++++|+++
T Consensus 517 ~~~v~~~~~l~~~ga-~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~ 595 (1143)
T KOG4177|consen 517 EDTVKVAKILLEHGA-NVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKH 595 (1143)
T ss_pred hhhHHHHHHHhhcCC-ceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHc
Confidence 356677777777655 67788888888888888888888888888888888 7778888888888888888888888888
Q ss_pred CCCccch
Q psy8764 81 NTRGTEI 87 (420)
Q Consensus 81 ~~~~~~~ 87 (420)
++..++.
T Consensus 596 GA~vna~ 602 (1143)
T KOG4177|consen 596 GASVNAA 602 (1143)
T ss_pred CCCCCcc
Confidence 7765544
No 50
>PHA02795 ankyrin-like protein; Provisional
Probab=99.14 E-value=2.4e-10 Score=118.13 Aligned_cols=112 Identities=11% Similarity=0.066 Sum_probs=74.6
Q ss_pred CCCHHHHHHHHhcCCCCCCCcC-----CCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVD-----KDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAAL 75 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D-----~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~ 75 (420)
+|+.+++++|+++|+...+..+ ..|.||+|.|+.+|+.++|++|+++||++ .+|..|.||||+|+.+|+.++++
T Consensus 159 ~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVe 238 (437)
T PHA02795 159 KKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVS 238 (437)
T ss_pred cCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHH
Confidence 4677777777776653322221 23667777888888888888888888888 77888888888888888888888
Q ss_pred HHHhCCCCccchhcccCCCCcchHHHHHhhC--------HHHHHHHhhc
Q psy8764 76 AMVTHNTRGTEIMSLRSDKHPCVTLALVASM--------PRVFESVQDK 116 (420)
Q Consensus 76 ~Ll~~~~~~~~~~~~~~~~~~~~~~~li~~~--------p~~~~~lLD~ 116 (420)
.|+.+|+.....+ ..+.++.+.+...+. .++++.++++
T Consensus 239 lLL~~GAdIN~~d---~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~ 284 (437)
T PHA02795 239 WLLENGANVNAVM---SNGYTCLDVAVDRGSVIARRETHLKILEILLRE 284 (437)
T ss_pred HHHHCCCCCCCcC---CCCCCHHHHHHHcCCcccccccHHHHHHHHHhC
Confidence 8888876554332 222333334444331 3667777653
No 51
>PHA02946 ankyin-like protein; Provisional
Probab=99.12 E-value=5.7e-10 Score=116.72 Aligned_cols=126 Identities=10% Similarity=0.003 Sum_probs=92.3
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCC--HHHHHHHHHCCCcc--cccCCCCcHHHHHHHcCCHHHHHHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENK--PKAICLLLSLNCKL--LYNCMDLSAIDYAIYYKFPEAALAM 77 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~--~~vV~lLL~~Ga~i--~~n~~g~TpLh~A~~~g~~evv~~L 77 (420)
+|+.+++++|+++++ ++|.+|++|+||||+|+..++ .+++++|+++||++ ..|..|.|||| |+..|+.++++.|
T Consensus 82 ~g~~eiv~lLL~~GA-din~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~L 159 (446)
T PHA02946 82 INNNRIVAMLLTHGA-DPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKI 159 (446)
T ss_pred cCCHHHHHHHHHCcC-CCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHH
Confidence 689999999999775 799999999999999998764 89999999999999 36899999998 7778999999999
Q ss_pred HhCCCCccchhcccCCCCcchH-HHHHhhC--HHHHHHHhhccccccc-cCCCCcceeee
Q psy8764 78 VTHNTRGTEIMSLRSDKHPCVT-LALVASM--PRVFESVQDKSITKAN-CKKDSKSFYIK 133 (420)
Q Consensus 78 l~~~~~~~~~~~~~~~~~~~~~-~~li~~~--p~~~~~lLD~ci~~~~-~~~~~~~~~i~ 133 (420)
+.++......+ .. +.+|. .++.... .++++.++++...... +..+.+..|+.
T Consensus 160 l~~gad~~~~d---~~-G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~TpLH~A 215 (446)
T PHA02946 160 MSIGFEARIVD---KF-GKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIV 215 (446)
T ss_pred HhccccccccC---CC-CCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 99876544322 11 22233 3333222 3667788877654433 22344555543
No 52
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=99.11 E-value=3.6e-10 Score=124.06 Aligned_cols=85 Identities=12% Similarity=-0.026 Sum_probs=75.1
Q ss_pred CCCHHHHHHHHhcCCCCCCCc-CCCCChHHHHHHH--cCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCC--HHHHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQV-DKDGNTALHLATM--ENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKF--PEAAL 75 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~-D~~G~TpLHlAa~--~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~--~evv~ 75 (420)
+|+.++++.|++.+..++|.. |..|+||||.|+. .|+.++|++|+++|+++ ..|..|.||||+|+.+|+ .++++
T Consensus 152 ~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVk 231 (764)
T PHA02716 152 GIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIK 231 (764)
T ss_pred CCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHH
Confidence 578899999999873478988 9999999999865 46899999999999999 999999999999999995 59999
Q ss_pred HHHhCCCCccc
Q psy8764 76 AMVTHNTRGTE 86 (420)
Q Consensus 76 ~Ll~~~~~~~~ 86 (420)
+|+++|+..+.
T Consensus 232 lLLe~GADVN~ 242 (764)
T PHA02716 232 KIIELGGDMDM 242 (764)
T ss_pred HHHHcCCCCCC
Confidence 99999876543
No 53
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.10 E-value=2.4e-10 Score=127.94 Aligned_cols=115 Identities=13% Similarity=0.048 Sum_probs=86.7
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKLLYNCMDLSAIDYAIYYKFPEAALAMVTHN 81 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i~~n~~g~TpLh~A~~~g~~evv~~Ll~~~ 81 (420)
+|+.++++.|+++++ ++|..|.+|+||||+|+..||.+++++|++.|+... ...|.+|||.|+.+|+.++++.|++++
T Consensus 568 ~g~~~~v~~Ll~~ga-din~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~-~~~~~~~L~~Aa~~g~~~~v~~Ll~~G 645 (823)
T PLN03192 568 KGYEDCVLVLLKHAC-NVHIRDANGNTALWNAISAKHHKIFRILYHFASISD-PHAAGDLLCTAAKRNDLTAMKELLKQG 645 (823)
T ss_pred cChHHHHHHHHhcCC-CCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccC-cccCchHHHHHHHhCCHHHHHHHHHCC
Confidence 699999999999765 799999999999999999999999888887665542 234667888888888888888888877
Q ss_pred CCccchhcccCCCCcchHHHHHhhCHHHHHHHhhcccccc
Q psy8764 82 TRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSITKA 121 (420)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lLD~ci~~~ 121 (420)
...+.. +.++.+..+.+..+...++++.++++.....
T Consensus 646 adin~~---d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~ 682 (823)
T PLN03192 646 LNVDSE---DHQGATALQVAMAEDHVDMVRLLIMNGADVD 682 (823)
T ss_pred CCCCCC---CCCCCCHHHHHHHCCcHHHHHHHHHcCCCCC
Confidence 654432 2222344556666777888888887766443
No 54
>KOG0512|consensus
Probab=99.08 E-value=1.9e-10 Score=103.64 Aligned_cols=78 Identities=15% Similarity=0.055 Sum_probs=68.2
Q ss_pred CCCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCC-HHHHHHHH
Q psy8764 1 MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKF-PEAALAMV 78 (420)
Q Consensus 1 m~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~-~evv~~Ll 78 (420)
.+||.++++.|+..++ +.+.+.+.||||||-||.-++.+++.+||++|||+ +..+..+||||+|+...+ .+.+.+|+
T Consensus 106 Yn~h~div~~ll~~gA-n~~a~T~~GWTPLhSAckWnN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll 184 (228)
T KOG0512|consen 106 YNGHLDIVHELLLSGA-NKEAKTNEGWTPLHSACKWNNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLL 184 (228)
T ss_pred hcCchHHHHHHHHccC-CcccccccCccchhhhhcccchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHh
Confidence 3799999999998776 68889999999999999999999999999999999 888888999999997655 45555554
Q ss_pred h
Q psy8764 79 T 79 (420)
Q Consensus 79 ~ 79 (420)
.
T Consensus 185 ~ 185 (228)
T KOG0512|consen 185 H 185 (228)
T ss_pred h
Confidence 3
No 55
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.08 E-value=4e-10 Score=111.83 Aligned_cols=76 Identities=13% Similarity=0.122 Sum_probs=68.8
Q ss_pred CCCHHHHHHHHhcCCCCCCCc-CCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQV-DKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMV 78 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~-D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll 78 (420)
.|+.++++.|+++|+ ++|.. +..|.||||+|+..|+.+++++|+++||++ ..|..|.||||+|+..++.+++..+.
T Consensus 80 ~~~~eivklLL~~GA-DVN~~~~~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~ 157 (300)
T PHA02884 80 CDNDDAAKLLIRYGA-DVNRYAEEAKITPLYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMIC 157 (300)
T ss_pred cCCHHHHHHHHHcCC-CcCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhc
Confidence 588999999999876 78985 568999999999999999999999999999 89999999999999999998876554
No 56
>PHA02917 ankyrin-like protein; Provisional
Probab=99.07 E-value=9.1e-10 Score=120.28 Aligned_cols=110 Identities=13% Similarity=0.114 Sum_probs=83.6
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHH--HHcCCHHHHHHHHHCCCcc-cccC---CC-----------CcHHHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLA--TMENKPKAICLLLSLNCKL-LYNC---MD-----------LSAIDY 64 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlA--a~~g~~~vV~lLL~~Ga~i-~~n~---~g-----------~TpLh~ 64 (420)
+|+.+++++|++.|+ ++|..|.+|+||||.| +.+|+.++|++|+++||++ ..|. .| .||||+
T Consensus 113 ~~~~e~vk~Ll~~Ga-din~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~ 191 (661)
T PHA02917 113 NVDVDLIKVLVEHGF-DLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHL 191 (661)
T ss_pred cCCHHHHHHHHHcCC-CCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHH
Confidence 689999999999776 8999999999999964 3579999999999999999 5543 23 599999
Q ss_pred HHH-----------cCCHHHHHHHHhCCCCccchhcccCCCCcchH-HHHHhhCH--HHHHHHhhc
Q psy8764 65 AIY-----------YKFPEAALAMVTHNTRGTEIMSLRSDKHPCVT-LALVASMP--RVFESVQDK 116 (420)
Q Consensus 65 A~~-----------~g~~evv~~Ll~~~~~~~~~~~~~~~~~~~~~-~~li~~~p--~~~~~lLD~ 116 (420)
|+. +|+.+++++|+.++...+... .+ +.+|. .++....+ ++++.+++.
T Consensus 192 a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d---~~-G~TpLh~A~~~g~~~~eivk~Li~g 253 (661)
T PHA02917 192 YIISHLYSESDTRAYVRPEVVKCLINHGIKPSSID---KN-YCTALQYYIKSSHIDIDIVKLLMKG 253 (661)
T ss_pred HHhhcccccccccccCcHHHHHHHHHCCCCcccCC---CC-CCcHHHHHHHcCCCcHHHHHHHHhC
Confidence 986 568999999999987654322 22 33333 34444443 677777753
No 57
>KOG0502|consensus
Probab=99.06 E-value=3.3e-10 Score=105.54 Aligned_cols=103 Identities=14% Similarity=0.080 Sum_probs=79.8
Q ss_pred CCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCCCCccchhcccCCCCc
Q psy8764 18 LLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHNTRGTEIMSLRSDKHP 96 (420)
Q Consensus 18 ~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~~~~~~~~~~~~~~~ 96 (420)
.+|.+|+.|.|||.+||+.||.++|++||+.||++ +.-+...|+|.+|++.|..++|++|+..+-..+.- +-.+.+
T Consensus 152 ~VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvy---DwNGgT 228 (296)
T KOG0502|consen 152 KVNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVY---DWNGGT 228 (296)
T ss_pred cccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCccee---ccCCCc
Confidence 58999999999999999999999999999999999 88888999999999999999999999876543322 222112
Q ss_pred chHHHHHhhCHHHHHHHhhcccccccc
Q psy8764 97 CVTLALVASMPRVFESVQDKSITKANC 123 (420)
Q Consensus 97 ~~~~~li~~~p~~~~~lLD~ci~~~~~ 123 (420)
....+.-.+.-++++.++.+......+
T Consensus 229 pLlyAvrgnhvkcve~Ll~sGAd~t~e 255 (296)
T KOG0502|consen 229 PLLYAVRGNHVKCVESLLNSGADVTQE 255 (296)
T ss_pred eeeeeecCChHHHHHHHHhcCCCcccc
Confidence 122233345667888888866654443
No 58
>PHA02876 ankyrin repeat protein; Provisional
Probab=99.05 E-value=1.7e-09 Score=118.58 Aligned_cols=112 Identities=15% Similarity=0.128 Sum_probs=78.4
Q ss_pred CHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHc-CCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8764 4 YTNTMVHLNSVHSHLLDQVDKDGNTALHLATME-NKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHN 81 (420)
Q Consensus 4 ~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~-g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~ 81 (420)
+.++++.|++.++ +++..|..|+||||+|+.. ++.+++++|+++|+++ ..|..|.||||+|+..|+.++++.|+.++
T Consensus 320 ~~~~v~~Ll~~ga-din~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~g 398 (682)
T PHA02876 320 DTENIRTLIMLGA-DVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYG 398 (682)
T ss_pred CHHHHHHHHHcCC-CCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 4788888888765 6888888888888888874 5788888888888888 88888888888888888888888888887
Q ss_pred CCccchhcccCCCCcchHHHHHhhC-HHHHHHHhhcccc
Q psy8764 82 TRGTEIMSLRSDKHPCVTLALVASM-PRVFESVQDKSIT 119 (420)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~li~~~-p~~~~~lLD~ci~ 119 (420)
....... ....+..+.+....- ..+++.++++...
T Consensus 399 ad~~~~~---~~g~T~Lh~A~~~~~~~~~vk~Ll~~gad 434 (682)
T PHA02876 399 ADIEALS---QKIGTALHFALCGTNPYMSVKTLIDRGAN 434 (682)
T ss_pred CCccccC---CCCCchHHHHHHcCCHHHHHHHHHhCCCC
Confidence 6654332 111222333332222 2345666665544
No 59
>PHA02792 ankyrin-like protein; Provisional
Probab=99.01 E-value=8.7e-10 Score=118.16 Aligned_cols=114 Identities=13% Similarity=0.075 Sum_probs=87.6
Q ss_pred CCCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHH-cCCHHHHHHHHHCCCcc-c-------------------------
Q psy8764 1 MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATM-ENKPKAICLLLSLNCKL-L------------------------- 53 (420)
Q Consensus 1 m~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~-~g~~~vV~lLL~~Ga~i-~------------------------- 53 (420)
.+|+.|++++|+++|+ ++|.+++.|+||+|+|+. +||.|+|++|+++||++ .
T Consensus 81 ~n~~lElvk~LI~~GA-dvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 159 (631)
T PHA02792 81 DNIDIELLKLLISKGL-EINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDEL 159 (631)
T ss_pred hcccHHHHHHHHHcCC-CcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhc
Confidence 3799999999999765 899999999999999966 79999999999999973 1
Q ss_pred -----------ccCCCCcHHHHHHHcC-------CHHHHHHHHhCCCCccchhcccCCCCcchHHHHHhh--CHHHHHHH
Q psy8764 54 -----------YNCMDLSAIDYAIYYK-------FPEAALAMVTHNTRGTEIMSLRSDKHPCVTLALVAS--MPRVFESV 113 (420)
Q Consensus 54 -----------~n~~g~TpLh~A~~~g-------~~evv~~Ll~~~~~~~~~~~~~~~~~~~~~~~li~~--~p~~~~~l 113 (420)
.++.|.||||+|+.++ ++|+++.|++|++.....+ .++++....++... --+.++.+
T Consensus 160 ~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d---~~g~t~l~~~~~~~~i~~ei~~~L 236 (631)
T PHA02792 160 DDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYT---YREHTTLYYYVDKCDIKREIFDAL 236 (631)
T ss_pred cccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccC---CCCChHHHHHHHcccchHHHHHHH
Confidence 1345999999999999 8999999999987544322 22223233333333 35677888
Q ss_pred hhccc
Q psy8764 114 QDKSI 118 (420)
Q Consensus 114 LD~ci 118 (420)
++.|.
T Consensus 237 ~~~~~ 241 (631)
T PHA02792 237 FDSNY 241 (631)
T ss_pred Hhccc
Confidence 87544
No 60
>KOG0195|consensus
Probab=99.00 E-value=3e-10 Score=109.43 Aligned_cols=81 Identities=17% Similarity=0.153 Sum_probs=71.7
Q ss_pred HHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCCCCccc
Q psy8764 8 MVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHNTRGTE 86 (420)
Q Consensus 8 ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~~~~~ 86 (420)
|++-|+...+++|.-|+.|.+|||+||++||..+|+.||++|+.+ ..|-...||||+|+.+||.++|+.|++.+++.++
T Consensus 16 vrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvna 95 (448)
T KOG0195|consen 16 VRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNA 95 (448)
T ss_pred EEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccch
Confidence 344566666789999999999999999999999999999999999 8888899999999999999999999988776655
Q ss_pred hh
Q psy8764 87 IM 88 (420)
Q Consensus 87 ~~ 88 (420)
+.
T Consensus 96 vn 97 (448)
T KOG0195|consen 96 VN 97 (448)
T ss_pred hh
Confidence 43
No 61
>PHA02730 ankyrin-like protein; Provisional
Probab=99.00 E-value=1.8e-09 Score=116.67 Aligned_cols=62 Identities=23% Similarity=0.248 Sum_probs=38.2
Q ss_pred CcCCCCChHHHHHHHcC---CHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcC--CHHHHHHHHhCCC
Q psy8764 21 QVDKDGNTALHLATMEN---KPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYK--FPEAALAMVTHNT 82 (420)
Q Consensus 21 ~~D~~G~TpLHlAa~~g---~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g--~~evv~~Ll~~~~ 82 (420)
.+|.+|+||||+|+.+| +.++|++||++||++ .+|..|.||||+|+..| +.|+|++|++++.
T Consensus 36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~ 103 (672)
T PHA02730 36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYS 103 (672)
T ss_pred hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCC
Confidence 55666666666666665 366666666666666 66666666666666644 5666666666643
No 62
>KOG4177|consensus
Probab=98.99 E-value=6e-10 Score=125.13 Aligned_cols=82 Identities=16% Similarity=0.147 Sum_probs=77.5
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
.|+...|+.||++++ +++.+|+.|+||||.||..||.+++++|+++||++ ..+.+|.||||+|++.|+.++++.+...
T Consensus 550 ~g~v~~VkfLLe~gA-dv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~ 628 (1143)
T KOG4177|consen 550 YGNVDLVKFLLEHGA-DVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVV 628 (1143)
T ss_pred cCCchHHHHhhhCCc-cccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhc
Confidence 589999999999776 89999999999999999999999999999999999 9999999999999999999999999988
Q ss_pred CCCc
Q psy8764 81 NTRG 84 (420)
Q Consensus 81 ~~~~ 84 (420)
++..
T Consensus 629 ~~~~ 632 (1143)
T KOG4177|consen 629 TATP 632 (1143)
T ss_pred cCcc
Confidence 7764
No 63
>KOG0502|consensus
Probab=98.99 E-value=9.2e-10 Score=102.59 Aligned_cols=83 Identities=19% Similarity=0.191 Sum_probs=78.2
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
.||.++|++||+.++ +.+...+...|||.+|++.|..++|++||.++.|+ ..|.+|-|||-+|++.||.++++.|+..
T Consensus 170 ~G~i~vV~fLL~~GA-dp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~s 248 (296)
T KOG0502|consen 170 KGHIPVVQFLLNSGA-DPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNS 248 (296)
T ss_pred cCchHHHHHHHHcCC-ChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhc
Confidence 599999999999776 78999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCCcc
Q psy8764 81 NTRGT 85 (420)
Q Consensus 81 ~~~~~ 85 (420)
++..+
T Consensus 249 GAd~t 253 (296)
T KOG0502|consen 249 GADVT 253 (296)
T ss_pred CCCcc
Confidence 87654
No 64
>PHA02736 Viral ankyrin protein; Provisional
Probab=98.98 E-value=7.3e-10 Score=98.68 Aligned_cols=96 Identities=11% Similarity=0.151 Sum_probs=72.3
Q ss_pred CCCcCCCCChHHHHHHHcCCHH---HHHHHHHCCCcc-ccc-CCCCcHHHHHHHcCCHHHHHHHHhC-CCCccchhcccC
Q psy8764 19 LDQVDKDGNTALHLATMENKPK---AICLLLSLNCKL-LYN-CMDLSAIDYAIYYKFPEAALAMVTH-NTRGTEIMSLRS 92 (420)
Q Consensus 19 in~~D~~G~TpLHlAa~~g~~~---vV~lLL~~Ga~i-~~n-~~g~TpLh~A~~~g~~evv~~Ll~~-~~~~~~~~~~~~ 92 (420)
++..|.+|.||||+||+.|+.+ ++++|+++|+++ ..+ ..|.||||+|+..|+.++++.|+.+ +...+... .
T Consensus 48 ~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~---~ 124 (154)
T PHA02736 48 VLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILN---Y 124 (154)
T ss_pred HHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcccc---C
Confidence 3456899999999999999874 688999999999 777 5899999999999999999999974 44332221 1
Q ss_pred CCCcchHHHHHhhCHHHHHHHhhcc
Q psy8764 93 DKHPCVTLALVASMPRVFESVQDKS 117 (420)
Q Consensus 93 ~~~~~~~~~li~~~p~~~~~lLD~c 117 (420)
.+.+..+.+......++++.+++..
T Consensus 125 ~g~tpL~~A~~~~~~~i~~~Ll~~g 149 (154)
T PHA02736 125 AFKTPYYVACERHDAKMMNILRAKG 149 (154)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC
Confidence 1122234455556778888887643
No 65
>PHA02917 ankyrin-like protein; Provisional
Probab=98.97 E-value=1.8e-09 Score=118.06 Aligned_cols=81 Identities=22% Similarity=0.198 Sum_probs=74.5
Q ss_pred CHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHH-cCCHHHHHHHHhCC
Q psy8764 4 YTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIY-YKFPEAALAMVTHN 81 (420)
Q Consensus 4 ~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~-~g~~evv~~Ll~~~ 81 (420)
+.++++.|+++++ ++|.+|..|+||||+|+..|+.+++++|+++|+++ ..+..|.||||+|+. .++.+++++|+.++
T Consensus 431 ~~~~v~~Ll~~GA-dIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~g 509 (661)
T PHA02917 431 ILSTINICLPYLK-DINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHK 509 (661)
T ss_pred hHHHHHHHHHCCC-CCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcC
Confidence 4678899999876 79999999999999999999999999999999999 999999999999996 78999999999988
Q ss_pred CCcc
Q psy8764 82 TRGT 85 (420)
Q Consensus 82 ~~~~ 85 (420)
...+
T Consensus 510 a~i~ 513 (661)
T PHA02917 510 PTLD 513 (661)
T ss_pred CChh
Confidence 6544
No 66
>PHA02730 ankyrin-like protein; Provisional
Probab=98.97 E-value=1.4e-09 Score=117.50 Aligned_cols=81 Identities=15% Similarity=0.093 Sum_probs=72.9
Q ss_pred HHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccC-CCCcHHHHHHH--cCCHHHHHHHHhCC
Q psy8764 6 NTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNC-MDLSAIDYAIY--YKFPEAALAMVTHN 81 (420)
Q Consensus 6 e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~-~g~TpLh~A~~--~g~~evv~~Ll~~~ 81 (420)
+++++|+++++ ++|..|..|.||||+|+..|+.+++++|+++||++ ..+. .|.||||.|+. +|+.++++.|++++
T Consensus 443 ~ivk~LIs~GA-DINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~g 521 (672)
T PHA02730 443 DVFDILSKYMD-DIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYH 521 (672)
T ss_pred HHHHHHHhccc-chhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcC
Confidence 56899999776 79999999999999999999999999999999999 8886 59999999997 48999999999998
Q ss_pred CCccch
Q psy8764 82 TRGTEI 87 (420)
Q Consensus 82 ~~~~~~ 87 (420)
...+.+
T Consensus 522 a~i~~I 527 (672)
T PHA02730 522 PTLETM 527 (672)
T ss_pred CCHHHH
Confidence 765544
No 67
>KOG0515|consensus
Probab=98.96 E-value=2.3e-09 Score=110.10 Aligned_cols=81 Identities=14% Similarity=0.116 Sum_probs=74.2
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
.|..+.|+..+.. ..+..+.+++|-||||-|+..||.++|+||++.|+++ ..|.+||||||.|+..++.-+++.|+.+
T Consensus 560 eGEldlVq~~i~e-v~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~ckqLVe~ 638 (752)
T KOG0515|consen 560 EGELDLVQRIIYE-VTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMCKQLVES 638 (752)
T ss_pred cchHHHHHHHHHh-hcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHHHHHHhc
Confidence 5788888888864 3467788999999999999999999999999999999 9999999999999999999999999999
Q ss_pred CCC
Q psy8764 81 NTR 83 (420)
Q Consensus 81 ~~~ 83 (420)
++.
T Consensus 639 Gaa 641 (752)
T KOG0515|consen 639 GAA 641 (752)
T ss_pred cce
Confidence 864
No 68
>PHA02792 ankyrin-like protein; Provisional
Probab=98.96 E-value=4.1e-09 Score=113.01 Aligned_cols=84 Identities=7% Similarity=-0.071 Sum_probs=73.7
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCC--ChHHHHHHHcCCHH---HHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDG--NTALHLATMENKPK---AICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAAL 75 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G--~TpLHlAa~~g~~~---vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~ 75 (420)
+|+.+++++|+++|+ +++..|.+| .||||.|+.++..+ ++++|+++||++ .+|..|.||||.|+..|+.++++
T Consensus 349 ~gn~eIVelLIs~GA-DIN~kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eive 427 (631)
T PHA02792 349 NRDPKVVEYILKNGN-VVVEDDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVE 427 (631)
T ss_pred cCCHHHHHHHHHcCC-chhhhcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHH
Confidence 689999999999876 789888775 69999988876654 578999999999 99999999999999999999999
Q ss_pred HHHhCCCCccc
Q psy8764 76 AMVTHNTRGTE 86 (420)
Q Consensus 76 ~Ll~~~~~~~~ 86 (420)
+|+.+++....
T Consensus 428 lLLs~GADIN~ 438 (631)
T PHA02792 428 WLIDNGADINI 438 (631)
T ss_pred HHHHCCCCCCC
Confidence 99999876443
No 69
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.96 E-value=5.7e-09 Score=95.17 Aligned_cols=110 Identities=16% Similarity=0.145 Sum_probs=84.1
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCC-----HHHHHHHHHCCC--cc--cccCCCCcHHHHHHHcCCHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENK-----PKAICLLLSLNC--KL--LYNCMDLSAIDYAIYYKFPE 72 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~-----~~vV~lLL~~Ga--~i--~~n~~g~TpLh~A~~~g~~e 72 (420)
.|..++++.++..+. +++..|.+|.||||+|+.+|+ .+++++|++.|+ +. ..|..|.||||+|+..|+.+
T Consensus 83 ~~~~~~~~~l~~~~~-~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~ 161 (235)
T COG0666 83 KGDDKIVKLLLASGA-DVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDAD 161 (235)
T ss_pred cCcHHHHHHHHHcCC-CcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchH
Confidence 466778888888776 569999999999999999999 999999999999 45 66999999999999999999
Q ss_pred HHHHHHhCCCCccchhcccCCCCcchHHHHHhhCHHHHHHHhh
Q psy8764 73 AALAMVTHNTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQD 115 (420)
Q Consensus 73 vv~~Ll~~~~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lLD 115 (420)
+++.++..+.....-. ..+.+....+.....+++.+.+++
T Consensus 162 ~~~~ll~~~~~~~~~~---~~g~t~l~~a~~~~~~~~~~~l~~ 201 (235)
T COG0666 162 IVELLLEAGADPNSRN---SYGVTALDPAAKNGRIELVKLLLD 201 (235)
T ss_pred HHHHHHhcCCCCcccc---cCCCcchhhhcccchHHHHHHHHh
Confidence 9999999865433321 111222333444444555555554
No 70
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.95 E-value=1.3e-08 Score=84.37 Aligned_cols=79 Identities=19% Similarity=0.200 Sum_probs=59.6
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
.|+.++++.|++.++ ..+..|..|.||||+|+..|..+++++|+++|+++ ..+..|.||+|.|+..++.++++.|+.+
T Consensus 17 ~~~~~~i~~li~~~~-~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~ 95 (126)
T cd00204 17 NGHLEVVKLLLENGA-DVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKH 95 (126)
T ss_pred cCcHHHHHHHHHcCC-CCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHHHHHHHHHc
Confidence 467777777777655 44677777888888888888888888888877777 6677777888888888888888877776
Q ss_pred C
Q psy8764 81 N 81 (420)
Q Consensus 81 ~ 81 (420)
+
T Consensus 96 ~ 96 (126)
T cd00204 96 G 96 (126)
T ss_pred C
Confidence 5
No 71
>KOG0522|consensus
Probab=98.91 E-value=3.8e-09 Score=108.87 Aligned_cols=100 Identities=21% Similarity=0.284 Sum_probs=82.1
Q ss_pred CCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCCCCccchhcccCCC
Q psy8764 16 SHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHNTRGTEIMSLRSDK 94 (420)
Q Consensus 16 ~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~~~~~~~~~~~~~ 94 (420)
+..+|..|..|+||||+|++-||.++++.|+.+||++ .+|+.|+||||.|+..|+..++..++.|-+...
T Consensus 45 ~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~~~~q~--------- 115 (560)
T KOG0522|consen 45 SLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRHLKYQA--------- 115 (560)
T ss_pred hceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHHhHHHH---------
Confidence 3468999999999999999999999999999999999 999999999999999999999999887653211
Q ss_pred CcchHHHHHhhCHHHHHHHhhccccccccCCCCcceeeeechhhc
Q psy8764 95 HPCVTLALVASMPRVFESVQDKSITKANCKKDSKSFYIKYNFSCL 139 (420)
Q Consensus 95 ~~~~~~~li~~~p~~~~~lLD~ci~~~~~~~~~~~~~i~y~f~~L 139 (420)
...+.+.+|+..+.+++ -+|||.+++|.|-
T Consensus 116 ----~~~~~~~~p~ll~~l~~-----------~~DFYmE~~wdF~ 145 (560)
T KOG0522|consen 116 ----WEKWERRLPRLLAKLSE-----------MPDFYMEMKWDFQ 145 (560)
T ss_pred ----HHHHHhcchHHHHHHHh-----------CccceEEEEecce
Confidence 22355677887766553 3578888777654
No 72
>KOG0507|consensus
Probab=98.87 E-value=5.1e-09 Score=111.68 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=88.7
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
+|+.|+|+++|.++ +..|.....|.||||+||.+||.++|.+|+++|++. .+|+++.|+|++|++-|+.++++.|+..
T Consensus 92 ~g~~e~vkmll~q~-d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~ 170 (854)
T KOG0507|consen 92 NGNLEIVKMLLLQT-DILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQK 170 (854)
T ss_pred cCcchHHHHHHhcc-cCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhh
Confidence 68999999999877 478889999999999999999999999999999999 9999999999999999999999999876
Q ss_pred CCCccchhcccCC-----CCcchHHHHHhhCHHHHHHHhhccc
Q psy8764 81 NTRGTEIMSLRSD-----KHPCVTLALVASMPRVFESVQDKSI 118 (420)
Q Consensus 81 ~~~~~~~~~~~~~-----~~~~~~~~li~~~p~~~~~lLD~ci 118 (420)
+-........... ...|++++-.+..-++.+.++....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~ 213 (854)
T KOG0507|consen 171 KFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGF 213 (854)
T ss_pred ccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCC
Confidence 3221111100100 1345666666666666666665443
No 73
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=98.86 E-value=5.7e-09 Score=95.15 Aligned_cols=79 Identities=23% Similarity=0.242 Sum_probs=74.0
Q ss_pred CCHHHHHHHHhcCC--CCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy8764 3 GYTNTMVHLNSVHS--HLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVT 79 (420)
Q Consensus 3 G~~e~ve~LL~~~~--~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~ 79 (420)
|+.++++.|++.++ ...+..|..|+||||+|+..|+.+++++|++.|+++ ..|..|.||++.|+..|+.+++..++.
T Consensus 122 ~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~ 201 (235)
T COG0666 122 GNIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLD 201 (235)
T ss_pred chHHHHHHHHHcCCCCCCccccCCCCCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHh
Confidence 45999999999888 577788999999999999999999999999999999 889999999999999999999999998
Q ss_pred CC
Q psy8764 80 HN 81 (420)
Q Consensus 80 ~~ 81 (420)
.+
T Consensus 202 ~~ 203 (235)
T COG0666 202 KG 203 (235)
T ss_pred cC
Confidence 65
No 74
>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=98.85 E-value=2.2e-08 Score=80.47 Aligned_cols=83 Identities=12% Similarity=0.122 Sum_probs=67.1
Q ss_pred HHHHHHcCCHHHHHHHHHCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhCCCCccchhcccCCCCcchHHHHHhhCHHH
Q psy8764 30 LHLATMENKPKAICLLLSLNCKLLYNCMDLSAIDYAIYYKFPEAALAMVTHNTRGTEIMSLRSDKHPCVTLALVASMPRV 109 (420)
Q Consensus 30 LHlAa~~g~~~vV~lLL~~Ga~i~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~~~~~~~~~~~~~~~~~~~~li~~~p~~ 109 (420)
||.||+.|+.++++.|++.|+++.. |.||||+|+.+|+.++++.|+.++......+ ..+.+..+.+......++
T Consensus 1 L~~A~~~~~~~~~~~ll~~~~~~~~---~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~---~~g~t~L~~A~~~~~~~~ 74 (89)
T PF12796_consen 1 LHIAAQNGNLEILKFLLEKGADINL---GNTALHYAAENGNLEIVKLLLENGADINSQD---KNGNTALHYAAENGNLEI 74 (89)
T ss_dssp HHHHHHTTTHHHHHHHHHTTSTTTS---SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BS---TTSSBHHHHHHHTTHHHH
T ss_pred CHHHHHcCCHHHHHHHHHCcCCCCC---CCCHHHHHHHcCCHHHHHHHHHhcccccccC---CCCCCHHHHHHHcCCHHH
Confidence 7999999999999999999988833 9999999999999999999999886543322 222444556777788999
Q ss_pred HHHHhhccc
Q psy8764 110 FESVQDKSI 118 (420)
Q Consensus 110 ~~~lLD~ci 118 (420)
++.+++...
T Consensus 75 ~~~Ll~~g~ 83 (89)
T PF12796_consen 75 VKLLLEHGA 83 (89)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHcCC
Confidence 999998644
No 75
>KOG1710|consensus
Probab=98.82 E-value=9.4e-09 Score=99.17 Aligned_cols=86 Identities=16% Similarity=0.142 Sum_probs=76.3
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc--cccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL--LYNCMDLSAIDYAIYYKFPEAALAMVT 79 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i--~~n~~g~TpLh~A~~~g~~evv~~Ll~ 79 (420)
.|.++-+..||+. ...+|..|.+|+|+|..||..|+.++|++||++|||+ ..+..+-||||.|+.+|+.|+.++|+.
T Consensus 22 Kndt~~a~~LLs~-vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllld 100 (396)
T KOG1710|consen 22 KNDTEAALALLST-VRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLD 100 (396)
T ss_pred cCcHHHHHHHHHH-hhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHh
Confidence 4678888899985 4579999999999999999999999999999999999 456668999999999999999999999
Q ss_pred CCCCccchh
Q psy8764 80 HNTRGTEIM 88 (420)
Q Consensus 80 ~~~~~~~~~ 88 (420)
.|.....+.
T Consensus 101 aGa~~~~vN 109 (396)
T KOG1710|consen 101 AGARMYLVN 109 (396)
T ss_pred ccCcccccc
Confidence 987765554
No 76
>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=98.81 E-value=6.1e-08 Score=80.37 Aligned_cols=94 Identities=18% Similarity=0.162 Sum_probs=74.6
Q ss_pred CcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCCCCccchhcccCCCCcchH
Q psy8764 21 QVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHNTRGTEIMSLRSDKHPCVT 99 (420)
Q Consensus 21 ~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~~~~~~~~~~~~~~~~~~ 99 (420)
..|.+|.||||.|++.|+.++++.|+++|++. ..+..|.||+|.|+..++.++++.|+.++...... ........+
T Consensus 2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~---~~~~~~~l~ 78 (126)
T cd00204 2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNAR---DKDGNTPLH 78 (126)
T ss_pred CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCcccc---CCCCCCHHH
Confidence 34678999999999999999999999999997 88899999999999999999999999987532221 111122234
Q ss_pred HHHHhhCHHHHHHHhhcc
Q psy8764 100 LALVASMPRVFESVQDKS 117 (420)
Q Consensus 100 ~~li~~~p~~~~~lLD~c 117 (420)
.++.....+.++.++++.
T Consensus 79 ~a~~~~~~~~~~~L~~~~ 96 (126)
T cd00204 79 LAARNGNLDVVKLLLKHG 96 (126)
T ss_pred HHHHcCcHHHHHHHHHcC
Confidence 455566688888888865
No 77
>KOG0507|consensus
Probab=98.73 E-value=5.4e-09 Score=111.48 Aligned_cols=84 Identities=21% Similarity=0.217 Sum_probs=78.0
Q ss_pred CCCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy8764 1 MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVT 79 (420)
Q Consensus 1 m~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~ 79 (420)
|+|+.+++++|++..+ .++..|..|.+|||+||-+|+.++|+.||.++..+ ..+-.|.||||.|+.+||.|++.+|+.
T Consensus 58 Lng~~~is~llle~ea-~ldl~d~kg~~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~ 136 (854)
T KOG0507|consen 58 LNGQNQISKLLLDYEA-LLDLCDTKGILPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLK 136 (854)
T ss_pred hcCchHHHHHHhcchh-hhhhhhccCcceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHh
Confidence 6899999999999876 78999999999999999999999999999999666 889999999999999999999999999
Q ss_pred CCCCcc
Q psy8764 80 HNTRGT 85 (420)
Q Consensus 80 ~~~~~~ 85 (420)
+++...
T Consensus 137 ~~adp~ 142 (854)
T KOG0507|consen 137 KNADPF 142 (854)
T ss_pred cCCCcc
Confidence 987543
No 78
>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=98.73 E-value=1.8e-08 Score=74.16 Aligned_cols=44 Identities=27% Similarity=0.335 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLL 46 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL 46 (420)
.|+.++++.|++.+. ++|.+|++|+||||+|++.|+.+++++||
T Consensus 11 ~g~~~~~~~Ll~~~~-din~~d~~g~t~lh~A~~~g~~~~~~~Ll 54 (54)
T PF13637_consen 11 SGNLEIVKLLLEHGA-DINAQDEDGRTPLHYAAKNGNIDIVKFLL 54 (54)
T ss_dssp TT-HHHHHHHHHTTS-GTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred hCCHHHHHHHHHCCC-CCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence 689999999999865 79999999999999999999999999996
No 79
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=98.70 E-value=7.5e-08 Score=106.71 Aligned_cols=117 Identities=14% Similarity=0.108 Sum_probs=83.4
Q ss_pred CCCHHHHHHHHhcC-CCCCCCcCCCCChHHH-HHHHcCCHHHHHHHHHCCCc-----------------c---c------
Q psy8764 2 SGYTNTMVHLNSVH-SHLLDQVDKDGNTALH-LATMENKPKAICLLLSLNCK-----------------L---L------ 53 (420)
Q Consensus 2 ~G~~e~ve~LL~~~-~~~in~~D~~G~TpLH-lAa~~g~~~vV~lLL~~Ga~-----------------i---~------ 53 (420)
.|+.++++.+++.+ ..++|..|..|+|||| .|+.+|+.+++++|+++|+. . +
T Consensus 27 ~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~ 106 (743)
T TIGR00870 27 RGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSCRGAVGDTLLHAISLEYVDAVEAILLHLLA 106 (743)
T ss_pred cCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCCCCCcChHHHHHHHhccHHHHHHHHHHHhh
Confidence 58899999999861 3478889999999999 89999999999999999841 0 0
Q ss_pred -----------------ccCCCCcHHHHHHHcCCHHHHHHHHhCCCCccchhcc-----cC------CCCcchHHHHHhh
Q psy8764 54 -----------------YNCMDLSAIDYAIYYKFPEAALAMVTHNTRGTEIMSL-----RS------DKHPCVTLALVAS 105 (420)
Q Consensus 54 -----------------~n~~g~TpLh~A~~~g~~evv~~Ll~~~~~~~~~~~~-----~~------~~~~~~~~~li~~ 105 (420)
.+..|.||||+|+.+|+.+++++|+.+++..+.-... .. .+......+....
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~ 186 (743)
T TIGR00870 107 AFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLG 186 (743)
T ss_pred cccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhC
Confidence 0124889999999999999999999887655422100 00 0112233455566
Q ss_pred CHHHHHHHhhccc
Q psy8764 106 MPRVFESVQDKSI 118 (420)
Q Consensus 106 ~p~~~~~lLD~ci 118 (420)
.|++++.+++...
T Consensus 187 ~~~iv~lLl~~ga 199 (743)
T TIGR00870 187 SPSIVALLSEDPA 199 (743)
T ss_pred CHHHHHHHhcCCc
Confidence 7888888887553
No 80
>PF13606 Ank_3: Ankyrin repeat
Probab=98.68 E-value=2e-08 Score=65.43 Aligned_cols=28 Identities=32% Similarity=0.485 Sum_probs=26.7
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCcc
Q psy8764 25 DGNTALHLATMENKPKAICLLLSLNCKL 52 (420)
Q Consensus 25 ~G~TpLHlAa~~g~~~vV~lLL~~Ga~i 52 (420)
+|+||||+||+.|+.++|++|+++|+|+
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadv 28 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGADV 28 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence 5999999999999999999999999987
No 81
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.67 E-value=2.5e-08 Score=66.08 Aligned_cols=31 Identities=35% Similarity=0.565 Sum_probs=29.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCcc-ccc
Q psy8764 25 DGNTALHLATMENKPKAICLLLSLNCKL-LYN 55 (420)
Q Consensus 25 ~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n 55 (420)
+|+||||+||..|+.+++++|+++||++ .+|
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 32 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD 32 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 5999999999999999999999999999 665
No 82
>KOG0505|consensus
Probab=98.59 E-value=7.2e-08 Score=99.72 Aligned_cols=85 Identities=14% Similarity=0.152 Sum_probs=77.6
Q ss_pred CCCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy8764 1 MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVT 79 (420)
Q Consensus 1 m~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~ 79 (420)
+.|.++-++.||..++ .+|..+.+|.||||-||...|.++|++|+++|++| ..|..|+||||.|+..||.+++.+|+.
T Consensus 49 ~~~d~~ev~~ll~~ga-~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~ 127 (527)
T KOG0505|consen 49 SRGDLEEVRKLLNRGA-SPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQ 127 (527)
T ss_pred ccccHHHHHHHhccCC-CccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHH
Confidence 3688899999998775 67999999999999999999999999999999999 889999999999999999999999999
Q ss_pred CCCCccc
Q psy8764 80 HNTRGTE 86 (420)
Q Consensus 80 ~~~~~~~ 86 (420)
+++.-.+
T Consensus 128 ~gA~~~a 134 (527)
T KOG0505|consen 128 HGANLLA 134 (527)
T ss_pred hhhhhhh
Confidence 9865433
No 83
>KOG4214|consensus
Probab=98.53 E-value=2.5e-07 Score=75.77 Aligned_cols=63 Identities=22% Similarity=0.179 Sum_probs=56.8
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYA 65 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A 65 (420)
.|..+++++|++-++ +++..|+.|-|||.-|+-+||.++|++||++||+- ....+|.+.+.-+
T Consensus 44 ~GQl~ilefli~iGA-~i~~kDKygITPLLsAvwEGH~~cVklLL~~GAdrt~~~PdG~~~~eat 107 (117)
T KOG4214|consen 44 YGQLSILEFLISIGA-NIQDKDKYGITPLLSAVWEGHRDCVKLLLQNGADRTIHAPDGTALIEAT 107 (117)
T ss_pred cchHHHHHHHHHhcc-ccCCccccCCcHHHHHHHHhhHHHHHHHHHcCcccceeCCCchhHHhhc
Confidence 378899999999876 79999999999999999999999999999999999 7888887776644
No 84
>KOG1710|consensus
Probab=98.49 E-value=3.2e-07 Score=88.77 Aligned_cols=79 Identities=19% Similarity=0.225 Sum_probs=72.9
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
.|+.+.++.||+.++...+.++..|.||||+||..|+.++.++|++.||.. ..|.-|+||=..|+.-|+-++|..+-++
T Consensus 55 kGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN~ 134 (396)
T KOG1710|consen 55 KGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINNH 134 (396)
T ss_pred cCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhcc
Confidence 699999999999987544578899999999999999999999999999999 9999999999999999999999888665
No 85
>KOG0818|consensus
Probab=98.44 E-value=5.4e-07 Score=92.39 Aligned_cols=77 Identities=23% Similarity=0.246 Sum_probs=69.5
Q ss_pred CCCHHHHHHHHhcCCCCCCCcC-CCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVD-KDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVT 79 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D-~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~ 79 (420)
.|+.++.-.||+.|+ +.|--+ +.|+||||.||+.|...-+++|+-.|||+ ..|.+|+||+.+|-..||-++++.|+.
T Consensus 143 t~nlet~LRll~lGA-~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~laeRl~e 221 (669)
T KOG0818|consen 143 TGNLETCLRLLSLGA-QANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELAERLVE 221 (669)
T ss_pred cccHHHHHHHHHccc-ccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHHHHHHH
Confidence 477888888999887 677654 67999999999999999999999999999 999999999999999999999998753
No 86
>KOG0515|consensus
Probab=98.42 E-value=3.2e-07 Score=94.65 Aligned_cols=76 Identities=16% Similarity=0.069 Sum_probs=64.5
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc--cccCCCCcHHHHHH--HcCCHHHHHHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL--LYNCMDLSAIDYAI--YYKFPEAALAM 77 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i--~~n~~g~TpLh~A~--~~g~~evv~~L 77 (420)
.||.+||++|++.++ ++|..|.+||||||.||..++..+++.|+++||.| ..-.++.||.+-+- +.|..++.++|
T Consensus 593 aghyeIVkFLi~~ga-nVNa~DSdGWTPLHCAASCNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL 671 (752)
T KOG0515|consen 593 AGHYEIVKFLIEFGA-NVNAADSDGWTPLHCAASCNNVPMCKQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYL 671 (752)
T ss_pred cchhHHHHHHHhcCC-cccCccCCCCchhhhhhhcCchHHHHHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHH
Confidence 599999999999876 79999999999999999999999999999999999 34466888877553 35666777666
Q ss_pred H
Q psy8764 78 V 78 (420)
Q Consensus 78 l 78 (420)
-
T Consensus 672 ~ 672 (752)
T KOG0515|consen 672 Y 672 (752)
T ss_pred H
Confidence 4
No 87
>KOG0505|consensus
Probab=98.41 E-value=4.3e-07 Score=94.09 Aligned_cols=77 Identities=19% Similarity=0.217 Sum_probs=68.0
Q ss_pred HHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCCCCccch
Q psy8764 10 HLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHNTRGTEI 87 (420)
Q Consensus 10 ~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~~~~~~ 87 (420)
..+.. ++..+..+..|-|+||.|+.+|..++.++|+.+|.++ ++|.+|+||||-|+.+|+.+++++|+.|+......
T Consensus 183 q~l~~-G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~ 260 (527)
T KOG0505|consen 183 QWLNA-GAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAK 260 (527)
T ss_pred HHHhc-cccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchh
Confidence 34443 3467888888999999999999999999999999999 99999999999999999999999999998765543
No 88
>KOG0705|consensus
Probab=98.39 E-value=6.3e-07 Score=93.35 Aligned_cols=80 Identities=21% Similarity=0.143 Sum_probs=69.4
Q ss_pred CHHHHHHHHhcCCCC-CC--CcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy8764 4 YTNTMVHLNSVHSHL-LD--QVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVT 79 (420)
Q Consensus 4 ~~e~ve~LL~~~~~~-in--~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~ 79 (420)
+..++-+||.++... +| ..+.+|+||||+||+.|++...++|+=+|+|+ .+|..|.|||.+|-+.|..|++.+|+.
T Consensus 636 Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~sqec~d~llq 715 (749)
T KOG0705|consen 636 DLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGSQECIDVLLQ 715 (749)
T ss_pred HHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcccHHHHHHHHH
Confidence 356777888876532 33 35677899999999999999999999999999 999999999999999999999999999
Q ss_pred CCCC
Q psy8764 80 HNTR 83 (420)
Q Consensus 80 ~~~~ 83 (420)
++--
T Consensus 716 ~gcp 719 (749)
T KOG0705|consen 716 YGCP 719 (749)
T ss_pred cCCC
Confidence 8743
No 89
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=98.36 E-value=2e-06 Score=94.44 Aligned_cols=88 Identities=11% Similarity=0.043 Sum_probs=72.6
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCCCCccchhcccCCCCcchHHHHHhhC
Q psy8764 28 TALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHNTRGTEIMSLRSDKHPCVTLALVASM 106 (420)
Q Consensus 28 TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~~~~~~~~~~~~~~~~~~~~li~~~ 106 (420)
++||.||.+|+.++|++|+++|+++ ..|..|.||||+|+.+|+.+++++|+.++...+..+ ..+.+..+.+.....
T Consensus 84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d---~~G~TpLh~A~~~g~ 160 (664)
T PTZ00322 84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLD---KDGKTPLELAEENGF 160 (664)
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCC---CCCCCHHHHHHHCCc
Confidence 3589999999999999999999999 889999999999999999999999999986544322 222333556677778
Q ss_pred HHHHHHHhhccc
Q psy8764 107 PRVFESVQDKSI 118 (420)
Q Consensus 107 p~~~~~lLD~ci 118 (420)
.++++.+++.|.
T Consensus 161 ~~iv~~Ll~~~~ 172 (664)
T PTZ00322 161 REVVQLLSRHSQ 172 (664)
T ss_pred HHHHHHHHhCCC
Confidence 999999998744
No 90
>KOG0783|consensus
Probab=98.34 E-value=2.3e-07 Score=99.86 Aligned_cols=97 Identities=21% Similarity=0.189 Sum_probs=74.6
Q ss_pred HHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-ccc-CCCCcHHHHHHHcCCHHHHHHHHhCCCCcc
Q psy8764 8 MVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYN-CMDLSAIDYAIYYKFPEAALAMVTHNTRGT 85 (420)
Q Consensus 8 ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n-~~g~TpLh~A~~~g~~evv~~Ll~~~~~~~ 85 (420)
..++-++..+..|..|..|+||||+|+..|..++++-||+||+|+ .+| .+|.||||-|+.+|+.|+|-.|+.+++--.
T Consensus 34 k~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~ 113 (1267)
T KOG0783|consen 34 KGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLR 113 (1267)
T ss_pred HHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceE
Confidence 334445555567889999999999999999999999999999999 776 469999999999999999999999985322
Q ss_pred chhcccCCCCcchHHHHHhhCHH
Q psy8764 86 EIMSLRSDKHPCVTLALVASMPR 108 (420)
Q Consensus 86 ~~~~~~~~~~~~~~~~li~~~p~ 108 (420)
. .+.+ +.||...+-+-.|+
T Consensus 114 i---~Dke-glsplq~~~r~~~~ 132 (1267)
T KOG0783|consen 114 I---KDKE-GLSPLQFLSRVLSS 132 (1267)
T ss_pred E---eccc-CCCHHHHHhhcccc
Confidence 1 1111 45665554443333
No 91
>KOG0506|consensus
Probab=98.31 E-value=5e-07 Score=92.26 Aligned_cols=77 Identities=21% Similarity=0.211 Sum_probs=66.3
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHC-CCcc-cccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSL-NCKL-LYNCMDLSAIDYAIYYKFPEAALAMVT 79 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~-Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~ 79 (420)
+|+...++.+.-.+. +++..|.+.+|+||.||.+||.+++++|++. +.+. .+|..|+|||+-|..-+|.+++++|-.
T Consensus 516 ~GD~~alrRf~l~g~-D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v~k~L~~ 594 (622)
T KOG0506|consen 516 NGDLSALRRFALQGM-DLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEVVKLLEE 594 (622)
T ss_pred cCCHHHHHHHHHhcc-cccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHHHHHHHH
Confidence 577777777665444 7899999999999999999999999999975 6777 889999999999999999999998864
No 92
>KOG2384|consensus
Probab=98.28 E-value=1.8e-06 Score=79.24 Aligned_cols=65 Identities=22% Similarity=0.155 Sum_probs=61.4
Q ss_pred CCCCcCCCCChHHHHHHHcCCHHHHHHHHHCC-Ccc-cccCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy8764 18 LLDQVDKDGNTALHLATMENKPKAICLLLSLN-CKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHNT 82 (420)
Q Consensus 18 ~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~G-a~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~ 82 (420)
++|.+|-.|||||+.||++|..++|.+|+.+| +.+ ..+..|.++..+|-..|+.+++..|.+...
T Consensus 4 ~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ 70 (223)
T KOG2384|consen 4 NINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDR 70 (223)
T ss_pred CccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhc
Confidence 68999999999999999999999999999999 788 999999999999999999999999987644
No 93
>KOG3676|consensus
Probab=98.26 E-value=1.9e-06 Score=93.19 Aligned_cols=77 Identities=18% Similarity=0.150 Sum_probs=72.0
Q ss_pred CCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCc--c-cccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy8764 3 GYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCK--L-LYNCMDLSAIDYAIYYKFPEAALAMVT 79 (420)
Q Consensus 3 G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~--i-~~n~~g~TpLh~A~~~g~~evv~~Ll~ 79 (420)
+..|++++|+++++ ++|.+|..|||.||.-+..-..++-.++|++|++ . +.|+.|.|||-+|+.-|++++-+.+++
T Consensus 251 nq~eivrlLl~~gA-d~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile 329 (782)
T KOG3676|consen 251 NQPEIVRLLLAHGA-DPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILE 329 (782)
T ss_pred CCHHHHHHHHhcCC-CCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHH
Confidence 56799999999665 8999999999999999999999999999999999 6 899999999999999999999999987
Q ss_pred C
Q psy8764 80 H 80 (420)
Q Consensus 80 ~ 80 (420)
.
T Consensus 330 ~ 330 (782)
T KOG3676|consen 330 R 330 (782)
T ss_pred h
Confidence 6
No 94
>KOG3609|consensus
Probab=98.25 E-value=4e-05 Score=83.61 Aligned_cols=82 Identities=18% Similarity=0.142 Sum_probs=62.3
Q ss_pred CCCHHHHHHHHhcCC---CCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-------------------c--c---
Q psy8764 2 SGYTNTMVHLNSVHS---HLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-------------------L--Y--- 54 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~---~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-------------------~--~--- 54 (420)
.|+.-.|+..++... .++|+.|.-|.+|||+|..+.|.+++++|++++..+ + .
T Consensus 35 ~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~gdALL~aI~~~~v~~VE~ll~~~~~~ 114 (822)
T KOG3609|consen 35 NGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEEGDALLLAIAVGSVPLVELLLVHFVDA 114 (822)
T ss_pred cCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHhccccc
Confidence 466767777665432 357888999999999999999999998888875221 0 0
Q ss_pred -------------cCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy8764 55 -------------NCMDLSAIDYAIYYKFPEAALAMVTHNTR 83 (420)
Q Consensus 55 -------------n~~g~TpLh~A~~~g~~evv~~Ll~~~~~ 83 (420)
-..+.||+.+||..++.|+++.|+..++.
T Consensus 115 ~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~ 156 (822)
T KOG3609|consen 115 PYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHC 156 (822)
T ss_pred chhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCC
Confidence 11367999999999999999999987654
No 95
>KOG4369|consensus
Probab=98.19 E-value=9e-07 Score=97.70 Aligned_cols=83 Identities=12% Similarity=0.073 Sum_probs=75.9
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc--cccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL--LYNCMDLSAIDYAIYYKFPEAALAMVT 79 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i--~~n~~g~TpLh~A~~~g~~evv~~Ll~ 79 (420)
+||.|.+++|+..++ ++...|+.|.+||.+|+-.||..+|+.|+.+.|++ -.|+.+.|+|.+||..|++++|++|+.
T Consensus 767 ggh~e~vellv~rga-niehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~ 845 (2131)
T KOG4369|consen 767 GGHREEVELLVVRGA-NIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLN 845 (2131)
T ss_pred CccHHHHHHHHHhcc-cccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHH
Confidence 799999999999776 68899999999999999999999999999999999 568889999999999999999999998
Q ss_pred CCCCcc
Q psy8764 80 HNTRGT 85 (420)
Q Consensus 80 ~~~~~~ 85 (420)
++..++
T Consensus 846 ~ganke 851 (2131)
T KOG4369|consen 846 AGANKE 851 (2131)
T ss_pred hhcccc
Confidence 876543
No 96
>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=98.03 E-value=4.1e-06 Score=62.29 Aligned_cols=41 Identities=12% Similarity=0.202 Sum_probs=23.5
Q ss_pred HHHCC-Ccc-cccCCCCcHHHHHHHcCCHHHHHHHHhCCCCcc
Q psy8764 45 LLSLN-CKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHNTRGT 85 (420)
Q Consensus 45 LL~~G-a~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~~~~ 85 (420)
||++| +++ ..|..|.||||+|+.+|+.+++++|+.++....
T Consensus 1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~ 43 (56)
T PF13857_consen 1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPN 43 (56)
T ss_dssp -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT
T ss_pred CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCC
Confidence 67888 788 899999999999999999999999997665433
No 97
>KOG4369|consensus
Probab=98.00 E-value=7.6e-06 Score=90.66 Aligned_cols=113 Identities=19% Similarity=0.188 Sum_probs=59.4
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc---cccCCCCcHHHHHHHcCCHHHHHHHH
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL---LYNCMDLSAIDYAIYYKFPEAALAMV 78 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i---~~n~~g~TpLh~A~~~g~~evv~~Ll 78 (420)
+|.+++|++||++++ +-..++-...|||-+|+..|..++++.||++|+.| ...+.|-+||.+|+.+||.+.++.|+
T Consensus 834 ggr~~vvelLl~~ga-nkehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh~~at~~ll 912 (2131)
T KOG4369|consen 834 GGRTRVVELLLNAGA-NKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGHQAATLSLL 912 (2131)
T ss_pred CCcchHHHHHHHhhc-cccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccccHHHHHHh
Confidence 355555555555544 22334444555666666666666666666666555 23445666666666666666666665
Q ss_pred hCCCCccchhcccCCCCcchHHHHHhhCHHHHHHHhhcc
Q psy8764 79 THNTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKS 117 (420)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~li~~~p~~~~~lLD~c 117 (420)
..+.+-++--.. ..++...+++...-|++...||++-
T Consensus 913 ~~gsdiNaqIeT--NrnTaltla~fqgr~evv~lLLa~~ 949 (2131)
T KOG4369|consen 913 QPGSDINAQIET--NRNTALTLALFQGRPEVVFLLLAAQ 949 (2131)
T ss_pred cccchhcccccc--ccccceeeccccCcchHHHHHHHHh
Confidence 554433322111 1123334445556677777777653
No 98
>KOG0782|consensus
Probab=97.90 E-value=1.2e-05 Score=83.65 Aligned_cols=64 Identities=14% Similarity=0.073 Sum_probs=49.3
Q ss_pred CCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc---cccCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy8764 19 LDQVDKDGNTALHLATMENKPKAICLLLSLNCKL---LYNCMDLSAIDYAIYYKFPEAALAMVTHNT 82 (420)
Q Consensus 19 in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i---~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~ 82 (420)
+-.++.+..|-||+||..|+.++|+++|++|..- ..+..|.|+||-|+-.++..+..+|+..++
T Consensus 892 ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdaga 958 (1004)
T KOG0782|consen 892 LLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGA 958 (1004)
T ss_pred eEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcch
Confidence 4456777888888888888888888888888643 456778888888888888888888887654
No 99
>PF13606 Ank_3: Ankyrin repeat
Probab=97.84 E-value=2.3e-05 Score=50.97 Aligned_cols=27 Identities=11% Similarity=0.017 Sum_probs=24.8
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy8764 57 MDLSAIDYAIYYKFPEAALAMVTHNTR 83 (420)
Q Consensus 57 ~g~TpLh~A~~~g~~evv~~Ll~~~~~ 83 (420)
+|+||||+|+.+|+.|++++|++++..
T Consensus 1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gad 27 (30)
T PF13606_consen 1 NGNTPLHLAASNGNIEIVKYLLEHGAD 27 (30)
T ss_pred CCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence 589999999999999999999998754
No 100
>KOG0783|consensus
Probab=97.56 E-value=0.0001 Score=79.97 Aligned_cols=65 Identities=23% Similarity=0.145 Sum_probs=58.5
Q ss_pred CCHHHHHHHHhcCCCCCCCcC-CCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHc
Q psy8764 3 GYTNTMVHLNSVHSHLLDQVD-KDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYY 68 (420)
Q Consensus 3 G~~e~ve~LL~~~~~~in~~D-~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~ 68 (420)
|..++++-||++|. +++.+| +.|+||||-|...||.+++-+||++|+.+ +.|++|.+||+.-++-
T Consensus 63 ~k~~~l~wLlqhGi-dv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~Dkeglsplq~~~r~ 129 (1267)
T KOG0783|consen 63 NKNSFLRWLLQHGI-DVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIKDKEGLSPLQFLSRV 129 (1267)
T ss_pred chhHHHHHHHhcCc-eeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEecccCCCHHHHHhhc
Confidence 56688999999865 778777 57999999999999999999999999999 9999999999988873
No 101
>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=97.54 E-value=0.00011 Score=48.36 Aligned_cols=29 Identities=14% Similarity=0.203 Sum_probs=26.0
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCcc
Q psy8764 57 MDLSAIDYAIYYKFPEAALAMVTHNTRGT 85 (420)
Q Consensus 57 ~g~TpLh~A~~~g~~evv~~Ll~~~~~~~ 85 (420)
+|.||||+|+.+|+.+++++|+.++....
T Consensus 1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~ 29 (33)
T PF00023_consen 1 DGNTPLHYAAQRGHPDIVKLLLKHGADIN 29 (33)
T ss_dssp TSBBHHHHHHHTTCHHHHHHHHHTTSCTT
T ss_pred CcccHHHHHHHHHHHHHHHHHHHCcCCCC
Confidence 58999999999999999999999876543
No 102
>PLN03223 Polycystin cation channel protein; Provisional
Probab=97.21 E-value=0.00074 Score=77.08 Aligned_cols=54 Identities=13% Similarity=0.078 Sum_probs=47.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhcc------ccccCCchhHHHHHHHHHHHHhhcc
Q psy8764 332 PLLYICGTAISTYMLFSVAVQSVQIYQQK------WHYLFDPTNIVALLLFFSATIMIVP 385 (420)
Q Consensus 332 ~~~~~~~~~i~~~~~~~i~~E~~Ql~~~~------~~Yf~d~~N~~ew~ly~~si~~v~~ 385 (420)
++..+|.++..++.+|.+.+|+.+|+.+| +.||+++|||+|.+.+.+++..+..
T Consensus 1173 yfvLacEIIFVLFILYfIyrEIkEI~k~KK~RG~~laYFKSfWNwLEIl~IlLS~AAIvL 1232 (1634)
T PLN03223 1173 WVRFAMEILLAIGAVYSVYEEAMDFGSSKKTRGSYLAYFLSGWNYVDFASIGLHLATIMM 1232 (1634)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccchhhHhccchHHHHHHHHHHHHHHHHH
Confidence 46778999999999999999999999876 8999999999999999888877653
No 103
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.13 E-value=0.00067 Score=40.72 Aligned_cols=28 Identities=36% Similarity=0.541 Sum_probs=24.1
Q ss_pred CCChHHHHHHHcCCHHHHHHHHHCCCcc
Q psy8764 25 DGNTALHLATMENKPKAICLLLSLNCKL 52 (420)
Q Consensus 25 ~G~TpLHlAa~~g~~~vV~lLL~~Ga~i 52 (420)
+|.||+|+|+..|+.++++.|+++|.++
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~ 28 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGADI 28 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 4789999999999999999999888764
No 104
>KOG0521|consensus
Probab=97.13 E-value=0.00038 Score=77.41 Aligned_cols=66 Identities=15% Similarity=0.099 Sum_probs=53.5
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCCCCccchh
Q psy8764 23 DKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHNTRGTEIM 88 (420)
Q Consensus 23 D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~~~~~~~ 88 (420)
=..|.|+||.|+..|...++++||+.|+++ .+|..|.||+|.+...|+...+..++.+++...+..
T Consensus 653 ~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~ 719 (785)
T KOG0521|consen 653 LCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFD 719 (785)
T ss_pred hhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccC
Confidence 346788888888888888888888888888 888888888888888888888888888776655543
No 105
>PF08016 PKD_channel: Polycystin cation channel; InterPro: IPR013122 Polycystic kidney diseases (PKD) are disorders characterised by large numbers of cysts distributed throughout grossly-enlarged kidneys. Cyst development is associated with impairment of kidney function, and ultimately kidney failure and death []. Most cases of autosomal dominant PKD result from mutations in the PKD1 gene that cause premature protein termination. A second gene for autosomal dominant polycystic kidney disease has been identified by positional cloning []. The predicted 968-amino acid sequence of the PKD2 gene product (polycystin-2) contains 6 transmembrane domains, with intracellular N- and C-termini. Polycystin-2 shares some similarity with the family of voltage-activated calcium (and sodium) channels, and contains a potential calcium-binding domain. Polycystin-2 is strongly expressed in ovary, foetal and adult kidney, testis, and small intestine. Polycystin-1 requires the presence of this protein for stable expression and is believed to interact with it via its C terminus. All mutations between exons 1 and 11 result in a truncated polycystin-2 that lacks a calcium-binding EF-hand domain and the cytoplasmic domains required for the interaction of polycystin-2 with polycystin-1 []. PKD2, although clinically milder than PKD1, has a deleterious impact on life expectancy. This entry contains proteins belonging to the polycystin family including Mucolipin and Polycystin-1 and -2 (PKD1 and PKD2). The domain contains the cation channel region of PKD1 and PKD2 proteins. PKD1 and PKD2 may function through a common signalling pathway that is necessary for normal tubulogenesis. The PKD2 gene product has six transmembrane spans with intracellular amino- and carboxyl-termini []. Mucolipin is a cationic channel which probably plays a role in the endocytic pathway and in the control of membrane trafficking of proteins and lipids. It could play a major role in the calcium ion transport regulating lysosomal exocytosis [, , ].
Probab=97.13 E-value=0.00081 Score=70.04 Aligned_cols=88 Identities=20% Similarity=0.347 Sum_probs=69.5
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCchhHHHHHHHHHHHHhhccccc--------------c-cc---
Q psy8764 330 LHPLLYICGTAISTYMLFSVAVQSVQIYQQKWHYLFDPTNIVALLLFFSATIMIVPLFT--------------K-GR--- 391 (420)
Q Consensus 330 ~~~~~~~~~~~i~~~~~~~i~~E~~Ql~~~~~~Yf~d~~N~~ew~ly~~si~~v~~~~~--------------~-~~--- 391 (420)
...+..+|.++.+++.++.+.+|+..+..+|+.||++++|++|+++++++++.+.-... + ..
T Consensus 206 ~~~~~~~~~i~f~~~~l~~~~~ei~~i~~~g~~y~~~~WN~~e~~ii~ls~~~i~~~~~~~~~~~~~~~~~~~~~~~fv~ 285 (425)
T PF08016_consen 206 FDYFVLLCEILFVLFVLYFLYREIKKIRREGRAYFKSFWNWLELLIILLSLAVIVLYFYRMILASEALKQYRENPRSFVD 285 (425)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccccCC
Confidence 45567888999999999999999999999999999999999999999998876653210 0 01
Q ss_pred ccc-----cchhHHHHHHHHHHHHHHHHhhh
Q psy8764 392 YMT-----DYQISFTSLTVFLSWLTLLLNLQ 417 (420)
Q Consensus 392 ~~~-----~~qw~~ga~aifl~W~~lll~l~ 417 (420)
+.. .+...+.|+.+|++|++++-++|
T Consensus 286 f~~~a~~~~~~~~l~a~~vfl~~lrll~~l~ 316 (425)
T PF08016_consen 286 FQELAQWDQLYRYLLAFLVFLLWLRLLKLLR 316 (425)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhee
Confidence 111 22256788999999999998865
No 106
>KOG0511|consensus
Probab=97.12 E-value=0.00088 Score=67.42 Aligned_cols=49 Identities=20% Similarity=0.207 Sum_probs=27.6
Q ss_pred CCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc
Q psy8764 3 GYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL 52 (420)
Q Consensus 3 G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i 52 (420)
|+.+.|+.|++.|. ++|+.|...++||.+|+..||.++|++||++||-.
T Consensus 47 GD~d~v~~LVetgv-nVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC 95 (516)
T KOG0511|consen 47 GDVDRVRYLVETGV-NVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAIC 95 (516)
T ss_pred ccHHHHHHHHHhCC-CcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcc
Confidence 55555555555443 45555555555555555555555555555555544
No 107
>KOG0782|consensus
Probab=97.10 E-value=0.0015 Score=68.56 Aligned_cols=79 Identities=22% Similarity=0.216 Sum_probs=72.8
Q ss_pred CCCHHHHHHHHhcCCC-CCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHh
Q psy8764 2 SGYTNTMVHLNSVHSH-LLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVT 79 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~-~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~ 79 (420)
.|+-++|+++|++++. .+|..|+.|.|+||-||..++..+.++|++.||.+ ..|..|.||-.-|...|.+|++.+|-+
T Consensus 909 tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~ 988 (1004)
T KOG0782|consen 909 TGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLES 988 (1004)
T ss_pred cCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhh
Confidence 4888999999999864 58899999999999999999999999999999999 889999999999999999999988854
Q ss_pred C
Q psy8764 80 H 80 (420)
Q Consensus 80 ~ 80 (420)
.
T Consensus 989 r 989 (1004)
T KOG0782|consen 989 R 989 (1004)
T ss_pred h
Confidence 3
No 108
>KOG0818|consensus
Probab=96.98 E-value=0.0034 Score=65.12 Aligned_cols=70 Identities=17% Similarity=0.019 Sum_probs=59.7
Q ss_pred CCCcCCCCCh------HHHHHHHcCCHHHHHHHHHCCCcc-c-ccCCCCcHHHHHHHcCCHHHHHHHHhCCCCccchh
Q psy8764 19 LDQVDKDGNT------ALHLATMENKPKAICLLLSLNCKL-L-YNCMDLSAIDYAIYYKFPEAALAMVTHNTRGTEIM 88 (420)
Q Consensus 19 in~~D~~G~T------pLHlAa~~g~~~vV~lLL~~Ga~i-~-~n~~g~TpLh~A~~~g~~evv~~Ll~~~~~~~~~~ 88 (420)
...+|++|.| -||-.++.|+.++.--||..||+. - --..|.||||+|+..|+..-+++|+-.|++..+.+
T Consensus 120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d 197 (669)
T KOG0818|consen 120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQD 197 (669)
T ss_pred CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCC
Confidence 3456777766 499999999999999999999999 3 34679999999999999999999999988766554
No 109
>KOG0520|consensus
Probab=96.86 E-value=0.00042 Score=77.25 Aligned_cols=72 Identities=21% Similarity=0.143 Sum_probs=36.8
Q ss_pred HHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc--cc-----cCCCCcHHHHHHHcCCHHHHHHH
Q psy8764 6 NTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL--LY-----NCMDLSAIDYAIYYKFPEAALAM 77 (420)
Q Consensus 6 e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i--~~-----n~~g~TpLh~A~~~g~~evv~~L 77 (420)
+.+-+|...++..+|-.|..|+||||+|+..||..++..|.+.|++. .. +..|.|+-.+|..+|+..++.+|
T Consensus 621 ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~l 699 (975)
T KOG0520|consen 621 EWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYL 699 (975)
T ss_pred ceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHH
Confidence 33333333334445555555555555555555555555555555443 11 12355555555555555555554
No 110
>KOG0506|consensus
Probab=96.86 E-value=0.0012 Score=68.05 Aligned_cols=59 Identities=14% Similarity=0.041 Sum_probs=54.2
Q ss_pred cCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 22 VDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 22 ~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
.+.++-.++++||++|...+.+-+.-.|.|+ ..|.+.+|+||+|+..|+.+++++|++.
T Consensus 502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~ 561 (622)
T KOG0506|consen 502 RENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNA 561 (622)
T ss_pred ccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHH
Confidence 3455677999999999999999999999999 9999999999999999999999999975
No 111
>KOG0521|consensus
Probab=96.71 E-value=0.001 Score=74.09 Aligned_cols=78 Identities=21% Similarity=0.244 Sum_probs=69.0
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
.|..-+++.||+.++ ++|..|..|+||||.+...||...+.+|+++||+. +.+.+|.+|+++|....+.|.+-++...
T Consensus 666 ~~~~~~~e~ll~~ga-~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~~d~~~l~~l~ 744 (785)
T KOG0521|consen 666 TGDSGAVELLLQNGA-DVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAANADIVLLLRLA 744 (785)
T ss_pred cchHHHHHHHHhcCC-cchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhccccHHHHHhhh
Confidence 456678899999766 69999999999999999999999999999999999 9999999999999887887777666443
No 112
>KOG0511|consensus
Probab=96.70 E-value=0.0029 Score=63.81 Aligned_cols=58 Identities=10% Similarity=0.050 Sum_probs=53.7
Q ss_pred ChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhCCCCc
Q psy8764 27 NTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTHNTRG 84 (420)
Q Consensus 27 ~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~~~ 84 (420)
+--|-.||+.|..+.|+.|++.|.++ ..|+...+||.+|+-.||.++|++|+.+|+-.
T Consensus 37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC 95 (516)
T KOG0511|consen 37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAIC 95 (516)
T ss_pred hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcc
Confidence 34588999999999999999999999 99999999999999999999999999998643
No 113
>KOG2505|consensus
Probab=96.30 E-value=0.007 Score=62.98 Aligned_cols=53 Identities=15% Similarity=0.163 Sum_probs=45.9
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHH
Q psy8764 23 DKDGNTALHLATMENKPKAICLLLSLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMV 78 (420)
Q Consensus 23 D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll 78 (420)
|.---|+||+||.+|..++|..||+.|||. ++|..|.||..++. ++||-...+
T Consensus 427 ~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~---nkdVk~~F~ 480 (591)
T KOG2505|consen 427 DYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA---NKDVKSIFI 480 (591)
T ss_pred ccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc---cHHHHHHHH
Confidence 334679999999999999999999999999 99999999999996 666655544
No 114
>KOG0520|consensus
Probab=96.02 E-value=0.0036 Score=70.02 Aligned_cols=85 Identities=8% Similarity=0.089 Sum_probs=63.7
Q ss_pred CCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHH-HCCCcc-cccCCCCcHHHHHHHcCCHHHHHHHHhC
Q psy8764 3 GYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLL-SLNCKL-LYNCMDLSAIDYAIYYKFPEAALAMVTH 80 (420)
Q Consensus 3 G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL-~~Ga~i-~~n~~g~TpLh~A~~~g~~evv~~Ll~~ 80 (420)
||.-.++.+++-.....+..|.+|.-.+|++|. ||.+.+-+|+ -.|..+ .+|..|+||||+|+..|+..++..|+.-
T Consensus 585 lyawLie~~~e~~~~~~~eld~d~qgV~hfca~-lg~ewA~ll~~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~l 663 (975)
T KOG0520|consen 585 LYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAA-LGYEWAFLPISADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIEL 663 (975)
T ss_pred hHHHHHHHHhcccccCchhhcccCCChhhHhhh-cCCceeEEEEeecccccccccCCCCcccchHhhcCHHHHHHHHHHh
Confidence 455666777764233566778888888899444 5555555444 568888 8999999999999999999999999988
Q ss_pred CCCccchh
Q psy8764 81 NTRGTEIM 88 (420)
Q Consensus 81 ~~~~~~~~ 88 (420)
++....+.
T Consensus 664 ga~~~~~t 671 (975)
T KOG0520|consen 664 GADPGAVT 671 (975)
T ss_pred cccccccc
Confidence 77665443
No 115
>KOG3599|consensus
Probab=95.22 E-value=0.042 Score=61.56 Aligned_cols=88 Identities=16% Similarity=0.344 Sum_probs=65.6
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHhccc-cccCCchhHHHHHHHHHHHHhhcccc--------------c-cc-c-
Q psy8764 330 LHPLLYICGTAISTYMLFSVAVQSVQIYQQKW-HYLFDPTNIVALLLFFSATIMIVPLF--------------T-KG-R- 391 (420)
Q Consensus 330 ~~~~~~~~~~~i~~~~~~~i~~E~~Ql~~~~~-~Yf~d~~N~~ew~ly~~si~~v~~~~--------------~-~~-~- 391 (420)
..++..+|.++..++.++.++-|+.++.+++. +|+++.+|++||++...+++.++-.. . ++ .
T Consensus 461 ~~~~~~l~~vvf~l~~~yf~~~e~~~i~~~~~~~y~~s~wN~ld~~i~~ls~~~~~~~~~r~~l~~~~l~~~~~~~~~~f 540 (798)
T KOG3599|consen 461 GSSLIMLCEVVFLLFVLYFAVAEGLKIWIHRLGRYVRSKWNWLDLAIVLLSVVLLVLMITRTGLADGVLTGFERASPRTF 540 (798)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 45567778888888889999999999996665 99999999999999999877665311 0 10 1
Q ss_pred --ccccchhH-----HHHHHHHHHHHHHHHhhh
Q psy8764 392 --YMTDYQIS-----FTSLTVFLSWLTLLLNLQ 417 (420)
Q Consensus 392 --~~~~~qw~-----~ga~aifl~W~~lll~l~ 417 (420)
+..-.||+ +.|+++||.|+.+.=++|
T Consensus 541 ~~F~~~a~~~~~~~~l~a~lvfl~tiK~~k~l~ 573 (798)
T KOG3599|consen 541 IDFTEVAQWNIAARNLLAFLVFLTTIKLWKVLR 573 (798)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22344554 467899999999876654
No 116
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=95.00 E-value=0.044 Score=32.31 Aligned_cols=27 Identities=7% Similarity=-0.031 Sum_probs=24.1
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCC
Q psy8764 57 MDLSAIDYAIYYKFPEAALAMVTHNTR 83 (420)
Q Consensus 57 ~g~TpLh~A~~~g~~evv~~Ll~~~~~ 83 (420)
.|.||+|.|+..|+.++++.++.++.+
T Consensus 1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~ 27 (30)
T smart00248 1 DGRTPLHLAAENGNLEVVKLLLDKGAD 27 (30)
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 478999999999999999999987653
No 117
>KOG0522|consensus
Probab=94.54 E-value=0.049 Score=57.27 Aligned_cols=47 Identities=19% Similarity=0.139 Sum_probs=42.5
Q ss_pred CCCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHC
Q psy8764 1 MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSL 48 (420)
Q Consensus 1 m~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~ 48 (420)
|-||.+.++.|+++|+ ++..+|++||+|||-|+..|+.+++.-+|.+
T Consensus 64 ~Lg~~~~a~~Ll~a~A-dv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~ 110 (560)
T KOG0522|consen 64 RLGHVEAARILLSAGA-DVSIKNNEGWSPLHEAVSTGNEQIITEVLRH 110 (560)
T ss_pred HhcCHHHHHHHHhcCC-CccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence 4589999999999887 7888999999999999999999999888765
No 118
>KOG2384|consensus
Probab=93.35 E-value=0.2 Score=46.58 Aligned_cols=52 Identities=15% Similarity=0.120 Sum_probs=48.1
Q ss_pred CCCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc
Q psy8764 1 MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL 52 (420)
Q Consensus 1 m~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i 52 (420)
|.|..+.+.+|+..+.+.+-.+|+.|.+++.+|-++|+.++|..|.+...+.
T Consensus 21 ~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~et 72 (223)
T KOG2384|consen 21 MEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRET 72 (223)
T ss_pred hhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccC
Confidence 5789999999999997789999999999999999999999999999886665
No 119
>PF00520 Ion_trans: Ion transport protein calcium channel signature potassium channel signature sodium channel signature; InterPro: IPR005821 This group of proteins is found in sodium, potassium, and calcium ion channels proteins. The proteins have 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some Na channels proteins the domain is repeated four times, whereas in others (e.g. K channels) the protein forms a tetramer in the membrane. A bacterial structure of the protein is known for the last two helices but is not included in the Pfam family due to it lacking the first four helices. ; GO: 0005216 ion channel activity, 0006811 ion transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3VMX_B 1QG9_A 1UJL_A 2LE7_A 2LCM_A 3A2A_A 3RW0_A 4EKW_A 3RVY_B 3RVZ_B ....
Probab=93.12 E-value=0.34 Score=43.30 Aligned_cols=74 Identities=12% Similarity=0.115 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHhcc---ccccCCchhHHHHHHHHHHHHhhccccccccccccchhHHHHHHHHHHHHHHHHhhhc
Q psy8764 342 STYMLFSVAVQSVQIYQQK---WHYLFDPTNIVALLLFFSATIMIVPLFTKGRYMTDYQISFTSLTVFLSWLTLLLNLQS 418 (420)
Q Consensus 342 ~~~~~~~i~~E~~Ql~~~~---~~Yf~d~~N~~ew~ly~~si~~v~~~~~~~~~~~~~qw~~ga~aifl~W~~lll~l~r 418 (420)
++..++.++.++.+++..+ .+|+.+++|++|....+.+++.+.+...+ . .+.+ ...+++-.+-|++++.++++
T Consensus 4 ~~~~~~f~~e~~l~~~~~~~~~~~y~~~~~~~~d~~~~~~~~~~~~~~~~~--~-~~~~-~~~~~~~~l~~~R~l~~~~~ 79 (200)
T PF00520_consen 4 IIFDVIFILEIVLRFFALGFKRRRYFRSWWNWFDFISVIPSIVSVILRSYG--S-ASAQ-SLLRIFRLLRLLRLLRLLRR 79 (200)
T ss_dssp HHHHHHHHHHHHHHHHTCCCG-GCCCCSHHHHHHHHHHHHHCCHHCCHCSS-----HHC-HCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHhcChhhcccccccccccccccccccc--c-cccc-ceEEEEEeeccccccccccc
Confidence 4555677789999999888 59999999999998888876666554432 1 1113 45566666899999888776
Q ss_pred c
Q psy8764 419 L 419 (420)
Q Consensus 419 f 419 (420)
+
T Consensus 80 ~ 80 (200)
T PF00520_consen 80 F 80 (200)
T ss_dssp T
T ss_pred c
Confidence 5
No 120
>KOG0705|consensus
Probab=92.83 E-value=0.14 Score=54.49 Aligned_cols=50 Identities=24% Similarity=0.178 Sum_probs=44.0
Q ss_pred CCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHCCCcc
Q psy8764 2 SGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKL 52 (420)
Q Consensus 2 ~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~Ga~i 52 (420)
.|++...++|+=.+. ++-..|..|+|||.||-.+|..+++..||.+|+--
T Consensus 671 ~gnVvl~QLLiWyg~-dv~~rda~g~t~l~yar~a~sqec~d~llq~gcp~ 720 (749)
T KOG0705|consen 671 KGNVVLAQLLIWYGV-DVMARDAHGRTALFYARQAGSQECIDVLLQYGCPD 720 (749)
T ss_pred hcchhHHHHHHHhCc-cceecccCCchhhhhHhhcccHHHHHHHHHcCCCc
Confidence 378888888886554 78889999999999999999999999999999854
No 121
>KOG3609|consensus
Probab=91.89 E-value=0.23 Score=55.11 Aligned_cols=81 Identities=11% Similarity=0.136 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccc-cccCCchhHHHHH---HHHHHHHhhccccc---c---ccc-cccch--------
Q psy8764 337 CGTAISTYMLFSVAVQSVQIYQQKW-HYLFDPTNIVALL---LFFSATIMIVPLFT---K---GRY-MTDYQ-------- 397 (420)
Q Consensus 337 ~~~~i~~~~~~~i~~E~~Ql~~~~~-~Yf~d~~N~~ew~---ly~~si~~v~~~~~---~---~~~-~~~~q-------- 397 (420)
-.++|+.+.+-++.-|+-|++..++ .|+.+++|++|.+ +|+++++.-...+. . ..+ +..|.
T Consensus 386 vE~li~~wV~G~iw~E~k~lw~~G~~~y~~~~Wn~lDf~m~siyl~s~~lr~~a~~~~~~~~~~~~~R~~W~~~dp~ll~ 465 (822)
T KOG3609|consen 386 LEILIYLWVMGLIWEEIKELWRVGRDGYLAFWWNWLDFAMISIYLASFILRAVAWGKREAFDPSSVDRMHWPSFDPSLLA 465 (822)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccchhhCCCCcHHHHH
Confidence 3467888888899999999999985 9999999999975 56665554332221 0 001 12222
Q ss_pred hHHHHHHHHHHHHHHHHhhh
Q psy8764 398 ISFTSLTVFLSWLTLLLNLQ 417 (420)
Q Consensus 398 w~~ga~aifl~W~~lll~l~ 417 (420)
=.+-|+|..||...++-+++
T Consensus 466 E~lfAiA~V~S~lrl~~i~t 485 (822)
T KOG3609|consen 466 EGLFAIANVLSFLKLFYIFT 485 (822)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 35778999999999887654
No 122
>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=67.10 E-value=11 Score=36.38 Aligned_cols=46 Identities=13% Similarity=0.097 Sum_probs=34.9
Q ss_pred CCHHHHHHHHHCC-Ccc----cccCCCCcHHHHHHHcCCHHHHHHHHhCCC
Q psy8764 37 NKPKAICLLLSLN-CKL----LYNCMDLSAIDYAIYYKFPEAALAMVTHNT 82 (420)
Q Consensus 37 g~~~vV~lLL~~G-a~i----~~n~~g~TpLh~A~~~g~~evv~~Ll~~~~ 82 (420)
.+..+.+..|++| +++ .+-.+|.|-|+-|..+++.+++.+|+.+|+
T Consensus 228 a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA 278 (284)
T PF06128_consen 228 ASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA 278 (284)
T ss_pred CcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence 3445566666666 233 234579999999999999999999999986
No 123
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=57.92 E-value=16 Score=28.42 Aligned_cols=48 Identities=25% Similarity=0.243 Sum_probs=38.3
Q ss_pred hHHHHHHHcCCHHHHHHHHHCCCcccccCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8764 28 TALHLATMENKPKAICLLLSLNCKLLYNCMDLSAIDYAIYYKFPEAALAMVTHN 81 (420)
Q Consensus 28 TpLHlAa~~g~~~vV~lLL~~Ga~i~~n~~g~TpLh~A~~~g~~evv~~Ll~~~ 81 (420)
.-+..|...|+.|+++.+++.+ .+ ....+..|+...+-|+++.|++.-
T Consensus 8 ~tl~~Ai~GGN~eII~~c~~~~-~~-----~~~~l~~AI~~H~n~i~~~l~~~y 55 (76)
T PF11929_consen 8 KTLEYAIIGGNFEIINICLKKN-KP-----DNDCLEYAIKSHNNEIADWLIENY 55 (76)
T ss_pred HHHHHHHhCCCHHHHHHHHHHh-cc-----HHHHHHHHHHHhhHHHHHHHHHhc
Confidence 4578999999999999988755 11 145799999999999999988754
No 124
>KOG2505|consensus
Probab=45.31 E-value=33 Score=36.54 Aligned_cols=43 Identities=12% Similarity=0.055 Sum_probs=34.7
Q ss_pred HHHHHHHHHCCCcc---cc----cCCCCcHHHHHHHcCCHHHHHHHHhCC
Q psy8764 39 PKAICLLLSLNCKL---LY----NCMDLSAIDYAIYYKFPEAALAMVTHN 81 (420)
Q Consensus 39 ~~vV~lLL~~Ga~i---~~----n~~g~TpLh~A~~~g~~evv~~Ll~~~ 81 (420)
.+.++.|.++++++ .. +.--.||||+|+.+|..++|..++..+
T Consensus 404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg 453 (591)
T KOG2505|consen 404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEG 453 (591)
T ss_pred hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhc
Confidence 66788888888776 11 223579999999999999999999877
No 125
>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=32.93 E-value=53 Score=25.51 Aligned_cols=40 Identities=15% Similarity=0.102 Sum_probs=32.9
Q ss_pred CCCCHHHHHHHHhcCCCCCCCcCCCCChHHHHHHHcCCHHHHHHHHHC
Q psy8764 1 MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSL 48 (420)
Q Consensus 1 m~G~~e~ve~LL~~~~~~in~~D~~G~TpLHlAa~~g~~~vV~lLL~~ 48 (420)
.+|+.|+++.+++.+. .+ ...+..|...-+.++++.|++.
T Consensus 15 ~GGN~eII~~c~~~~~--~~------~~~l~~AI~~H~n~i~~~l~~~ 54 (76)
T PF11929_consen 15 IGGNFEIINICLKKNK--PD------NDCLEYAIKSHNNEIADWLIEN 54 (76)
T ss_pred hCCCHHHHHHHHHHhc--cH------HHHHHHHHHHhhHHHHHHHHHh
Confidence 4899999999997542 22 4569999999999999999985
No 126
>COG5570 Uncharacterized small protein [Function unknown]
Probab=26.53 E-value=61 Score=23.90 Aligned_cols=22 Identities=23% Similarity=0.368 Sum_probs=18.5
Q ss_pred ccCCCcchhhhHHHHHHHHHHH
Q psy8764 272 ESNGNDVFTDEIDKLKRKLNEI 293 (420)
Q Consensus 272 ~~~~~~~~~~e~~~~k~rlk~~ 293 (420)
.|..++....|+...|-|+||=
T Consensus 27 ~Ps~dd~~i~eLKRrKL~lKee 48 (57)
T COG5570 27 SPSSDDLAIRELKRRKLRLKEE 48 (57)
T ss_pred CCCcchHHHHHHHHHHHHHHHH
Confidence 4666788899999999999974
No 127
>KOG4591|consensus
Probab=23.25 E-value=57 Score=30.94 Aligned_cols=46 Identities=15% Similarity=0.271 Sum_probs=33.6
Q ss_pred CCCChHHHHHHHcCCHHHHH-HHHHCCCcc--c---ccCCCCcHHHHHHHcC
Q psy8764 24 KDGNTALHLATMENKPKAIC-LLLSLNCKL--L---YNCMDLSAIDYAIYYK 69 (420)
Q Consensus 24 ~~G~TpLHlAa~~g~~~vV~-lLL~~Ga~i--~---~n~~g~TpLh~A~~~g 69 (420)
.+-..|||-|..-|..+++- ++++..+.+ . .|++|..+|++|....
T Consensus 220 ~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~~ 271 (280)
T KOG4591|consen 220 GKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCRE 271 (280)
T ss_pred CCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHHH
Confidence 34455899999988888886 456777777 3 3567888888886543
Done!