Your job contains 1 sequence.
>psy8764
MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAICLLLSLNCKLLYNCMDLS
AIDYAIYYKFPEAALAMVTHNTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSITK
ANCKKDSKSFYIKYNFSCLQCLRIYPEINEKTGDATAISKPIPLPALNNTALHLATISHH
FYRPTFLDRNLALFFHNCVFVGSNPTPTLFLQVLLHTELERNLPKFLLEKVDKMEIYEYP
NECKGKLGFLDLVIRKWFCNPFTEDAIDMVLESNGNDVFTDEIDKLKRKLNEIQIHLDHQ
FMFLRLIVHKMDIKTETDERDEGTSSNKELHPLLYICGTAISTYMLFSVAVQSVQIYQQK
WHYLFDPTNIVALLLFFSATIMIVPLFTKGRYMTDYQISFTSLTVFLSWLTLLLNLQSLL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy8764
(420 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0035934 - symbol:TrpA1 "Transient receptor potenti... 621 6.1e-92 2
ZFIN|ZDB-GENE-050106-1 - symbol:trpa1b "transient recepto... 177 3.0e-21 2
UNIPROTKB|G5E522 - symbol:TRPA1 "Uncharacterized protein"... 174 6.6e-21 2
UNIPROTKB|F1RWI1 - symbol:TRPA1 "Uncharacterized protein"... 167 5.1e-20 2
UNIPROTKB|O75762 - symbol:TRPA1 "Transient receptor poten... 179 1.0e-19 2
ZFIN|ZDB-GENE-050105-6 - symbol:trpa1a "transient recepto... 150 2.9e-17 2
UNIPROTKB|E1C7Y7 - symbol:TRPA1 "Uncharacterized protein"... 184 1.1e-16 2
UNIPROTKB|E1BZK9 - symbol:TRPA1 "Uncharacterized protein"... 184 1.1e-16 2
MGI|MGI:3522699 - symbol:Trpa1 "transient receptor potent... 156 1.2e-15 2
UNIPROTKB|F1Q2M0 - symbol:TRPA1 "Uncharacterized protein"... 186 4.2e-15 2
RGD|1303284 - symbol:Trpa1 "transient receptor potential ... 150 1.4e-14 2
UNIPROTKB|H0YAW0 - symbol:TRPA1 "Transient receptor poten... 179 1.6e-14 2
UNIPROTKB|I3LEM4 - symbol:I3LEM4 "Uncharacterized protein... 153 1.1e-11 3
>FB|FBgn0035934 [details] [associations]
symbol:TrpA1 "Transient receptor potential A1" species:7227
"Drosophila melanogaster" [GO:0006816 "calcium ion transport"
evidence=ISS] [GO:0005262 "calcium channel activity" evidence=ISS]
[GO:0009266 "response to temperature stimulus" evidence=NAS]
[GO:0005216 "ion channel activity" evidence=IEA] [GO:0006811 "ion
transport" evidence=IEA] [GO:0055085 "transmembrane transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0043052
"thermotaxis" evidence=IDA;IMP] [GO:0009408 "response to heat"
evidence=IMP] [GO:0034605 "cellular response to heat" evidence=IDA]
[GO:0042745 "circadian sleep/wake cycle" evidence=IMP] [GO:0007613
"memory" evidence=IMP] [GO:0033038 "bitter taste receptor activity"
evidence=IDA] [GO:0001580 "detection of chemical stimulus involved
in sensory perception of bitter taste" evidence=IMP] [GO:0040040
"thermosensory behavior" evidence=IMP] [GO:0007638 "mechanosensory
behavior" evidence=IMP] InterPro:IPR002110 InterPro:IPR005821
Pfam:PF00023 Pfam:PF00520 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 GO:GO:0016021 GO:GO:0034605 EMBL:AE014296
eggNOG:COG0666 GO:GO:0007613 GO:GO:0005262 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0040040 GO:GO:0043052 GO:GO:0007638 GO:GO:0001580
GO:GO:0042745 KO:K04984 EMBL:AY302598 RefSeq:NP_001097554.3
RefSeq:NP_648263.4 UniGene:Dm.15461 ProteinModelPortal:Q7Z020
SMR:Q7Z020 STRING:Q7Z020 TCDB:1.A.4.6.2 PaxDb:Q7Z020 GeneID:39015
KEGG:dme:Dmel_CG5751 CTD:8989 FlyBase:FBgn0035934 InParanoid:Q7Z020
OMA:DEDIDGC OrthoDB:EOG415DV7 GenomeRNAi:39015 NextBio:811470
Bgee:Q7Z020 Uniprot:Q7Z020
Length = 1296
Score = 621 (223.7 bits), Expect = 6.1e-92, Sum P(2) = 6.1e-92
Identities = 119/173 (68%), Positives = 138/173 (79%)
Query: 1 MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLS 60
MSGYT T+ L+SVHSHLLDQVDKDGNTALHLATMENKP AI +D+S
Sbjct: 653 MSGYTETIELLHSVHSHLLDQVDKDGNTALHLATMENKPHAISVLMSMGCKLVYNVLDMS 712
Query: 61 AIDYAIYYKFPEAALAMVTHNTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSITK 120
AIDYAIYYK+PEAALAMVTH R E+M+LRSDKHPCVTLAL+ASMP+VFE+VQDK ITK
Sbjct: 713 AIDYAIYYKYPEAALAMVTHEERANEVMALRSDKHPCVTLALIASMPKVFEAVQDKCITK 772
Query: 121 ANCKKDSKSFYIKYNFSCLQCLRIYPEINEKTGDATAISKPIPLPALNNTALH 173
ANCKKDSKSFYIKY+F+ LQC ++ +I+EKTG++ + PIPLPALN H
Sbjct: 773 ANCKKDSKSFYIKYSFAFLQCPFMFAKIDEKTGESITTASPIPLPALNTMVTH 825
Score = 336 (123.3 bits), Expect = 6.1e-92, Sum P(2) = 6.1e-92
Identities = 65/121 (53%), Positives = 87/121 (71%)
Query: 209 LFLQVLLHTELERNLPKFLLEKVDKMEIYEYPNECKGKLGFLDLVIRKWFCNPFTEDA-I 267
L +QV+LHTELER LP L++VDKME+ EYPNE K KLGF D ++RKWF NPFTED+ +
Sbjct: 1142 LAMQVVLHTELERKLPHVWLQRVDKMELIEYPNETKCKLGFCDFILRKWFSNPFTEDSSM 1201
Query: 268 DMVLESNGNDVFTDEIDKLKRKLNEIQIHLDHQFMFLRLIVHKMDIKTETDERDEGTSSN 327
D++ N +D E+++ +RKL +I L+ Q +RLIV KM+IKTE D+ DEG S N
Sbjct: 1202 DVISFDNNDDYINAELERQRRKLRDISRMLEQQHHLVRLIVQKMEIKTEADDVDEGISPN 1261
Query: 328 K 328
+
Sbjct: 1262 E 1262
Score = 117 (46.2 bits), Expect = 7.5e-69, Sum P(2) = 7.5e-69
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 334 LYICGTAISTYMLFSVAVQSVQIYQQKWHYLFDPTNIVALLLFFSATIMIVPLF 387
+ C I Y+L + + +QIYQQK HY+ + N+++ +L+ SA +M+ P F
Sbjct: 927 ILFCAVVIVVYILLNSMRELIQIYQQKLHYILETVNLISWVLYISALVMVTPAF 980
Score = 42 (19.8 bits), Expect = 2.9e-32, Sum P(3) = 2.9e-32
Identities = 8/11 (72%), Positives = 10/11 (90%)
Query: 169 NTALHLATISH 179
NTALHLAT+ +
Sbjct: 679 NTALHLATMEN 689
Score = 40 (19.1 bits), Expect = 2.9e-32, Sum P(3) = 2.9e-32
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 3 GYTNTMVHL--NSVHSHLLDQVDKDGNTALHLATMENKPKAI 42
G NT+ L + S ++++ D G T LH+++ + + +
Sbjct: 587 GRYNTVRQLLDSEKGSFIINESDGAGMTPLHISSQQGHTRVV 628
Score = 39 (18.8 bits), Expect = 3.7e-32, Sum P(3) = 3.7e-32
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 19 LDQVDKDGNTALHLATM 35
+ Q + G TALHLA +
Sbjct: 283 IQQGGEHGRTALHLAAI 299
Score = 38 (18.4 bits), Expect = 4.8e-32, Sum P(3) = 4.8e-32
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 23 DKDGNTALHLA 33
D GNT LH+A
Sbjct: 219 DNAGNTPLHIA 229
Score = 38 (18.4 bits), Expect = 4.8e-32, Sum P(3) = 4.8e-32
Identities = 11/38 (28%), Positives = 13/38 (34%)
Query: 23 DKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLS 60
D +GN LH A KA+ DLS
Sbjct: 362 DSEGNVPLHSAVHGGDIKAVELCLKSGAKISTQQHDLS 399
Score = 38 (18.4 bits), Expect = 1.2e-31, Sum P(3) = 1.2e-31
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 170 TALHLATISHH 180
TALHLA I H
Sbjct: 292 TALHLAAIYDH 302
>ZFIN|ZDB-GENE-050106-1 [details] [associations]
symbol:trpa1b "transient receptor potential cation
channel, subfamily A, member 1b" species:7955 "Danio rerio"
[GO:0006811 "ion transport" evidence=IEA] [GO:0055085
"transmembrane transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0070542 "response to fatty acid" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;ISS] [GO:0006810 "transport"
evidence=IEA] [GO:0015276 "ligand-gated ion channel activity"
evidence=IDA] [GO:0050960 "detection of temperature stimulus
involved in thermoception" evidence=IMP] [GO:0050907 "detection of
chemical stimulus involved in sensory perception" evidence=IDA]
[GO:0050974 "detection of mechanical stimulus involved in sensory
perception" evidence=ISS;IMP] [GO:0050968 "detection of chemical
stimulus involved in sensory perception of pain" evidence=IMP]
[GO:0008381 "mechanically-gated ion channel activity" evidence=ISS]
InterPro:IPR002110 InterPro:IPR005821 Pfam:PF00023 Pfam:PF00520
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 ZFIN:ZDB-GENE-050106-1
GO:GO:0016021 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0015276 GO:GO:0050974
GO:GO:0050968 GO:GO:0008381 HOGENOM:HOG000044486 HOVERGEN:HBG059027
EMBL:AY677197 IPI:IPI00506634 RefSeq:NP_001007067.1
UniGene:Dr.92897 ProteinModelPortal:Q5UM14 GeneID:474353
KEGG:dre:474353 CTD:474353 InParanoid:Q5UM14 NextBio:20850405
Uniprot:Q5UM14
Length = 1120
Score = 177 (67.4 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 52/166 (31%), Positives = 78/166 (46%)
Query: 3 GYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLSAI 62
GYT TM L + + LLD+ ++DGNTALH+A A+ D S +
Sbjct: 534 GYTQTMKILLAANVKLLDEKNEDGNTALHIAAQAGHVSAVLLLLDRGAEIALNDADNSFL 593
Query: 63 DYAIYYKFPEAALAMVTHNTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSITKAN 122
A+ + E A + H R E M+ K CV L ++ +P F+ + D+ IT+++
Sbjct: 594 HEAVRNERREVVNATIEHE-RCDESMTSFKAKSRCVVLDIIEFLPESFQHLLDQCITESD 652
Query: 123 CKKDSKSFYIKYNFSCLQCLRIYPEINEKTGDATAISKPIPLPALN 168
+S+ ++I YNF LQ I + KT A PL ALN
Sbjct: 653 HDANSQDYHIMYNFQWLQA-PIQLKKYAKTDKTKAFQ---PLAALN 694
Score = 154 (59.3 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
Identities = 38/111 (34%), Positives = 59/111 (53%)
Query: 211 LQVLLHTELERNLPKFLLEKVDKMEIYEYPNECKGKLGFLDLVIRKWFCNPFTEDAIDMV 270
+Q+ LHT LE LP + L++VDK YPN+CK L L+ ++ N +++
Sbjct: 983 MQIDLHTALEEKLPYWFLKRVDKPSTVVYPNKCKKVL--LEALVHGEIQNT-VRTRLNLC 1039
Query: 271 LESNGNDVFTDEIDKLKRKLNEIQIHLDHQFMFLRLIVHKMDIKTETDERD 321
G + E+ K K +L E+ L+ Q L+LI+ KM+I +E DE D
Sbjct: 1040 SRKEG--LLERELHKQKNRLKEMSCMLEKQHNLLKLIIQKMEITSEADEYD 1088
Score = 65 (27.9 bits), Expect = 5.4e-12, Sum P(2) = 5.4e-12
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 326 SNKELHPLLYICGTAISTYMLFSVAVQSVQIYQQKWHYLFDPTNIVALLLFFSATIMIVP 385
S E L+ +C + ++S+ + VQ+ QQ+ +Y D +N SA + +VP
Sbjct: 767 SFSEQQYLISVCIIMVIVMNVYSICKEVVQLAQQRVNYFTDFSNPADWSAAISALVFVVP 826
Query: 386 L 386
+
Sbjct: 827 M 827
Score = 41 (19.5 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 16 SHLLDQVDKDGNTALHLAT 34
S +L+ D+ G T LHLA+
Sbjct: 481 SKMLNDWDEKGLTPLHLAS 499
Score = 39 (18.8 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 16/74 (21%), Positives = 30/74 (40%)
Query: 19 LDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMD-LSAIDYAIYYKFPEAALAM 77
++ +DK +T LHLA + I +A+ +A EA M
Sbjct: 228 INYLDKSKSTPLHLAVRGGNIEVIKLCILKGAKVEQHQSGKCTALHFACSQGSLEAVKIM 287
Query: 78 VTHNTRGTEIMSLR 91
++ R +I+++R
Sbjct: 288 LSSYNRTEDIVNIR 301
Score = 37 (18.1 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 169 NTALHLATISHH 180
NTALH+A + H
Sbjct: 558 NTALHIAAQAGH 569
Score = 37 (18.1 bits), Expect = 3.3e-06, Sum P(3) = 3.3e-06
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 14 VHSHLLDQVDKDGNTALHLATMENKPKA 41
V +L+ D+ G T LH A +++ ++
Sbjct: 82 VGPEVLNVQDEQGRTPLHWAVEQDQQQS 109
>UNIPROTKB|G5E522 [details] [associations]
symbol:TRPA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050968 "detection of chemical stimulus involved in
sensory perception of pain" evidence=IEA] [GO:0050966 "detection of
mechanical stimulus involved in sensory perception of pain"
evidence=IEA] [GO:0050955 "thermoception" evidence=IEA] [GO:0048265
"response to pain" evidence=IEA] [GO:0042542 "response to hydrogen
peroxide" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0032421 "stereocilium bundle" evidence=IEA]
[GO:0009409 "response to cold" evidence=IEA] [GO:0005262 "calcium
channel activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR002110 InterPro:IPR005821 Pfam:PF00023
Pfam:PF00520 PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248
GO:GO:0016021 GO:GO:0042493 GO:GO:0005262 GO:GO:0050966
GO:GO:0009409 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0050955 GO:GO:0042542
GeneTree:ENSGT00690000102150 GO:GO:0050968 GO:GO:0048265
GO:GO:0032421 OMA:WLAYGFR EMBL:DAAA02038818
Ensembl:ENSBTAT00000002668 Uniprot:G5E522
Length = 1126
Score = 174 (66.3 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 65/249 (26%), Positives = 101/249 (40%)
Query: 1 MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLS 60
+ GYT TM + + D++D++GNTALH A E KA+ S
Sbjct: 527 LGGYTQTMKVILDTNLKCTDRLDEEGNTALHFAAREGHAKAVSLLLSYDADVVLNKQQAS 586
Query: 61 AIDYAIYYKFPEAALAMVTHNTRGT--EIMSLRSDKHPCVTLALVASMPRVFESVQDKSI 118
+ AI+ K E L + G ++ + S + C + LV +P + + D +
Sbjct: 587 FLHVAIHNKRKEVVLTTIRSKRWGECFKVFNHCSPTNRCPVIELVEYLPECMKVLLDFCV 646
Query: 119 TKANCKKDSKSFYIKYNFSCLQCLRIYPEINEKTGDATAISKPIPLPALNNTALH--LAT 176
+ K S+ ++I+YNF+ LQC P K G PL LN H +
Sbjct: 647 MPSTEDKSSQDYHIEYNFTYLQC----PLEFTKKGTPVPDIVYEPLLTLNAMVQHNRIEL 702
Query: 177 ISHHFYRPTFLDRNLALFFHNCVF-VGS---NPTPTLFLQVLLHTELERNLPKFLLEKVD 232
++H + L + LA F V +GS P FL V + + N + E D
Sbjct: 703 LNHPVCKEYLLMKWLAYGFRAHVLNLGSYCLGLFPMTFLVVSIRPGMAFNSTGIINETSD 762
Query: 233 KMEIYEYPN 241
EI + N
Sbjct: 763 HSEILDTKN 771
Score = 154 (59.3 bits), Expect = 6.6e-21, Sum P(2) = 6.6e-21
Identities = 42/115 (36%), Positives = 59/115 (51%)
Query: 211 LQVLLHTELERNLPKFLLEKVDKMEIYEYPNECKGKLGFLDLVIRKWFCNPFTEDAIDMV 270
+QV LHT LE+ LP + L KVD+ I YPN + G L V FC T I V
Sbjct: 986 MQVELHTSLEKKLPLWFLHKVDQKSIIVYPNRPRYSRGILRGVFHYIFCPHETRQEIPNV 1045
Query: 271 LESNGNDVFTDEIDKLKRKLNEIQIHLDHQFMFLRLIVHKMDIKTETDERDEGTS 325
S EI K K +L ++ L+ Q ++LI+ KM+I +ET++ D +S
Sbjct: 1046 DTS-----LETEIMKQKYRLKDLSSLLEKQHELIKLIIQKMEIISETEDEDYHSS 1095
Score = 56 (24.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 17/80 (21%), Positives = 32/80 (40%)
Query: 313 IKTETDERDEGTSSNKELHPLLYICGTAISTYMLFSVAVQSVQIYQQ---KWHYLFDPTN 369
I ET + E + + C + + + QI+QQ K +Y D N
Sbjct: 756 IINETSDHSEILDTKNSF--AINFCMILVLLSSILGYCKEVAQIFQQQPQKRNYFLDKDN 813
Query: 370 IVALLLFFSATIMIVPLFTK 389
+++ ++ I + PLF +
Sbjct: 814 AAEWIIYTTSIIFVSPLFIR 833
Score = 48 (22.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 10/32 (31%), Positives = 19/32 (59%)
Query: 11 LNSVHSHLLDQVDKDGNTALHLATMENKPKAI 42
+N +L+ +D GNT LH A +N+ +++
Sbjct: 87 VNESSCEVLNVMDDYGNTPLHWAAGKNQVESV 118
Score = 45 (20.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 16 SHLLDQVDKDGNTALHLATMENKPKAI 42
+ LL++ D G T LHLA K +
Sbjct: 476 TRLLNEGDLHGMTPLHLAAKNGHDKVV 502
Score = 44 (20.5 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 9 VHLNSVHSHLLDQVDKDGNTALHLATMENKPKAI 42
+ + + ++D+ D DG T LH A + P ++
Sbjct: 401 LQMQHIKELVMDE-DNDGCTPLHYACRQGVPVSV 433
Score = 43 (20.2 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 10/28 (35%), Positives = 18/28 (64%)
Query: 8 MVHLNSVHSHLLDQVDKDGNTALHLATM 35
MV S +S ++++VD + T LH A++
Sbjct: 295 MVSSYSGNSDIVNEVDGNHETLLHRASL 322
Score = 41 (19.5 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 24/91 (26%), Positives = 42/91 (46%)
Query: 228 LEKVDKMEIYEYPNECKGKLGFLDLVIRKWFCNPFTEDAIDMVLESNGNDVFTDEIDK-- 285
LE K E+ EYP L F+ L+I F P +++++ D+ E+ K
Sbjct: 931 LEPYLKNEL-EYP-----LLSFVHLIIFTMFV-PIV--LMNLLIGLAVGDIA--EVQKHA 979
Query: 286 -LKRKLNEIQIHLDHQFMFLRLIVHKMDIKT 315
LKR ++++H + +HK+D K+
Sbjct: 980 LLKRIAMQVELHTSLEKKLPLWFLHKVDQKS 1010
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 19 LDQVDKDGNTALHLATMENKPKAI 42
LD ++K TALH A + + +
Sbjct: 269 LDLLEKGKCTALHFAATQGATEIV 292
>UNIPROTKB|F1RWI1 [details] [associations]
symbol:TRPA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 GO:GO:0016021 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005216
GeneTree:ENSGT00690000102150 OMA:WLAYGFR EMBL:CU571032
Ensembl:ENSSSCT00000006780 Uniprot:F1RWI1
Length = 1121
Score = 167 (63.8 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 65/251 (25%), Positives = 100/251 (39%)
Query: 1 MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLS 60
+ GYT TM + + D++D +GNTALH A E KA+ S
Sbjct: 525 LGGYTQTMKVILDTNMKCTDRLDDEGNTALHFAAREGHAKAVALLLSYDANIILNKQRAS 584
Query: 61 AIDYAIYYKFPEAALAMVTHNTRGTEIMSLRSDKHP---CVTLALVASMPRVFESVQDKS 117
+ AI+ K E L + N R E + S P C + +V +P + + D
Sbjct: 585 FLHVAIHNKRKEVVLTTI-RNKRWEECLMTFSHYSPSNRCPVMEMVEYLPECMKVLLDFC 643
Query: 118 ITKANCKKDSKSFYIKYNFSCLQCLRIYP-EINEKTGDATAISKPIPLPALNNTALH--L 174
+ + K S ++I+YNF LQC P E +K ++ PL LN H +
Sbjct: 644 MMPSTEDKSSPDYHIEYNFRYLQC----PLEFTKKVALVQDVTYE-PLSTLNAMVQHNRI 698
Query: 175 ATISHHFYRPTFLDRNLALFFHNCVF-VGS---NPTPTLFLQVLLHTELERNLPKFLLEK 230
++H + L + A F V +GS P FL + + + N + E
Sbjct: 699 ELLNHPVCKEYLLMKWWAYGFRAHVMNLGSYCLGLLPMTFLVISIRPGMAFNSTGIINET 758
Query: 231 VDKMEIYEYPN 241
D EI + N
Sbjct: 759 SDHSEILDTKN 769
Score = 153 (58.9 bits), Expect = 5.1e-20, Sum P(2) = 5.1e-20
Identities = 42/115 (36%), Positives = 60/115 (52%)
Query: 211 LQVLLHTELERNLPKFLLEKVDKMEIYEYPNECKGKLGFLDLVIRKWFCNPFTEDAIDMV 270
+QV LHT LE+ LP + L KVD+ I YPN + G L V+ FC T I V
Sbjct: 981 MQVELHTSLEKKLPLWFLHKVDQKSITVYPNRPRYSGGLLRGVLHYIFCPQETRQEIPNV 1040
Query: 271 LESNGNDVFTDEIDKLKRKLNEIQIHLDHQFMFLRLIVHKMDIKTETDERDEGTS 325
S EI K K +L ++ L+ Q ++LI+ KM+I +ET++ D +S
Sbjct: 1041 DTS-----LETEIMKQKYRLKDLSSLLEKQHDLIKLIIQKMEIISETEDEDYQSS 1090
Score = 84 (34.6 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 313 IKTETDERDEGTSSNKELHPLLYICGTAISTYMLFSVAVQSVQIYQQKWHYLFDPTNIVA 372
I ET + E + + +C + +F + QI+QQK +Y FD +N +
Sbjct: 754 IINETSDHSEILDTKNSY--TINVCMILVLLSSIFGYCKEVAQIFQQKRNYFFDNSNALE 811
Query: 373 LLLFFSATIMIVPLF 387
+++ ++ I + PLF
Sbjct: 812 WIIYTTSIIFVSPLF 826
Score = 56 (24.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 35/168 (20%), Positives = 68/168 (40%)
Query: 18 LLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLSA-IDYAIYYKFPEAALA 76
+L+ +D GNT LH A +N+ ++I ++ A + A+ E
Sbjct: 91 VLNAMDDYGNTPLHWAAEKNQVESIKFLLRKGANPNLRNCNMMAPLHVAVQRLNNEVMKV 150
Query: 77 MVTHNTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSITKANCKKDSKSFYIKYN- 135
++ H+ GT+I + + + +A E + +K CK + + +
Sbjct: 151 LIEHS--GTDINLEGENGNTALIIACFTDNSEAVELLLNKGAKP--CKSNKWGCFPIHQA 206
Query: 136 -FS-CLQCLRIYPEINEKTGDATAISKPIPLPALNN---TALHLATIS 178
FS +C+ I + E+ G S+ + +NN + LH+A S
Sbjct: 207 AFSGAKKCMEIILKFGEENG----YSRVAHINFVNNRKVSPLHMAVQS 250
Score = 46 (21.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 3 GYTNTMVHL--NSVHSHLLDQVDKDGNTALHLATMENKPKAI 42
G NT L + + LL++ D G T LHLA K +
Sbjct: 459 GRINTCQRLLQDMSDTRLLNEGDLHGMTPLHLAAKNGHDKVV 500
Score = 38 (18.4 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 9/32 (28%), Positives = 17/32 (53%)
Query: 286 LKRKLNEIQIHLDHQFMFLRLIVHKMDIKTET 317
LKR ++++H + +HK+D K+ T
Sbjct: 976 LKRIAMQVELHTSLEKKLPLWFLHKVDQKSIT 1007
Score = 37 (18.1 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 19 LDQVDKDGNTALHLATMENKPKAI 42
LD ++K TALH A + + +
Sbjct: 266 LDLMEKGKCTALHFAATQGATEIV 289
>UNIPROTKB|O75762 [details] [associations]
symbol:TRPA1 "Transient receptor potential cation channel
subfamily A member 1" species:9606 "Homo sapiens" [GO:0005262
"calcium channel activity" evidence=IEA] [GO:0009409 "response to
cold" evidence=IEA] [GO:0032421 "stereocilium bundle" evidence=IEA]
[GO:0042493 "response to drug" evidence=IEA] [GO:0042542 "response
to hydrogen peroxide" evidence=IEA] [GO:0048265 "response to pain"
evidence=IEA] [GO:0050955 "thermoception" evidence=IEA] [GO:0050966
"detection of mechanical stimulus involved in sensory perception of
pain" evidence=IEA] [GO:0050968 "detection of chemical stimulus
involved in sensory perception of pain" evidence=IEA] [GO:0015267
"channel activity" evidence=TAS] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0006811 "ion transport" evidence=TAS]
InterPro:IPR002110 InterPro:IPR005821 Pfam:PF00023 Pfam:PF00520
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 GO:GO:0005887
GO:GO:0042493 eggNOG:COG0666 GO:GO:0005262 GO:GO:0006811
GO:GO:0050966 GO:GO:0009409 Gene3D:1.25.40.20 InterPro:IPR020683
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0015267 GO:GO:0050955
GO:GO:0042542 GO:GO:0050968 GO:GO:0048265 GO:GO:0032421 KO:K04984
CTD:8989 EMBL:Y10601 EMBL:AC022867 IPI:IPI00015963
RefSeq:NP_015628.2 UniGene:Hs.716816 ProteinModelPortal:O75762
SMR:O75762 STRING:O75762 TCDB:1.A.4.6.3 PhosphoSite:O75762
PaxDb:O75762 PRIDE:O75762 DNASU:8989 Ensembl:ENST00000262209
GeneID:8989 KEGG:hsa:8989 UCSC:uc003xza.3 GeneCards:GC08M072983
H-InvDB:HIX0034373 H-InvDB:HIX0124652 HGNC:HGNC:497 HPA:HPA026630
MIM:604775 neXtProt:NX_O75762 HOGENOM:HOG000044486
HOVERGEN:HBG059027 InParanoid:O75762 OMA:WLAYGFR OrthoDB:EOG49KFPT
BindingDB:O75762 ChEMBL:CHEMBL6007 DrugBank:DB00825 GenomeRNAi:8989
NextBio:33711 Bgee:O75762 CleanEx:HS_TRPA1 Genevestigator:O75762
GermOnline:ENSG00000104321 Uniprot:O75762
Length = 1119
Score = 179 (68.1 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 66/251 (26%), Positives = 106/251 (42%)
Query: 1 MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLS 60
M GYT TM + + D++D+DGNTALH A E KA+ S
Sbjct: 523 MGGYTQTMKVILDTNLKCTDRLDEDGNTALHFAAREGHAKAVALLLSHNADIVLNKQQAS 582
Query: 61 AIDYAIYYKFPEAALAMVTHNTRGTEIMSLRSDKHP---CVTLALVASMPRVFESVQDKS 117
+ A++ K E L ++ + R E + + S P C ++ +P + + D
Sbjct: 583 FLHLALHNKRKEVVLTII-RSKRWDECLKIFSHNSPGNKCPITEMIEYLPECMKVLLDFC 641
Query: 118 ITKANCKKDSKSFYIKYNFSCLQCLRIYP-EINEKTGDATAISKPIP-LPAL-NNTALHL 174
+ + K + +YI+YNF LQC P E +KT I +P+ L A+ N + L
Sbjct: 642 MLHSTEDKSCRDYYIEYNFKYLQC----PLEFTKKTPTQDVIYEPLTALNAMVQNNRIEL 697
Query: 175 ATISHHFYRPTFLDRNLALFFH-NCVFVGS---NPTPTLFLQVLLHTELERNLPKFLLEK 230
++H + L + LA F + + +GS P L V + + N + E
Sbjct: 698 --LNHPVCKEYLLMKWLAYGFRAHMMNLGSYCLGLIPMTILVVNIKPGMAFNSTGIINET 755
Query: 231 VDKMEIYEYPN 241
D EI + N
Sbjct: 756 SDHSEILDTTN 766
Score = 137 (53.3 bits), Expect = 1.0e-19, Sum P(2) = 1.0e-19
Identities = 39/115 (33%), Positives = 59/115 (51%)
Query: 211 LQVLLHTELERNLPKFLLEKVDKMEIYEYPNECKGKLGFLDLVIRKWFCNPFTEDAIDMV 270
+QV LHT LE+ LP + L KVD+ YPN+ + G L + FC F I
Sbjct: 978 MQVELHTSLEKKLPLWFLRKVDQKSTIVYPNKPRSG-GMLFHI----FCFLFCTGEIRQE 1032
Query: 271 LESNGNDVFTDEIDKLKRKLNEIQIHLDHQFMFLRLIVHKMDIKTETDERDEGTS 325
+ N + EI K K +L ++ L+ Q ++LI+ KM+I +ET++ D S
Sbjct: 1033 IP-NADKSLEMEILKQKYRLKDLTFLLEKQHELIKLIIQKMEIISETEDDDSHCS 1086
Score = 85 (35.0 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 313 IKTETDERDEGTSSNKELHPLLYICGTAISTYMLFSVAVQSVQIYQQKWHYLFDPTNIVA 372
I ET + E + L+ C + +F ++ QI+QQK +Y D +N++
Sbjct: 751 IINETSDHSEILDTTNSY--LIKTCMILVFLSSIFGYCKEAGQIFQQKRNYFMDISNVLE 808
Query: 373 LLLFFSATIMIVPLFTK 389
+++ + I ++PLF +
Sbjct: 809 WIIYTTGIIFVLPLFVE 825
Score = 56 (24.8 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 33/165 (20%), Positives = 64/165 (38%)
Query: 18 LLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLSA-IDYAIYYKFPEAALA 76
+L ++D GNT LH A +N+ +++ ++ A + A+ E
Sbjct: 90 VLHEMDDYGNTPLHCAVEKNQIESVKFLLSRGANPNLRNFNMMAPLHIAVQGMNNEVMKV 149
Query: 77 MVTHNTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSITKANCKKDSKSFYIKYN- 135
++ H T + + + V +A + + + K CK + + +
Sbjct: 150 LLEHRTIDVNLEG--ENGNTAVIIACTTNNSEALQILLKKGAKP--CKSNKWGCFPIHQA 205
Query: 136 -FS-CLQCLRIYPEINEKTGDATAISKPIPLPALNN---TALHLA 175
FS +C+ I E+ G S+ + + +NN T LHLA
Sbjct: 206 AFSGSKECMEIILRFGEEHG----YSRQLHINFMNNGKATPLHLA 246
Score = 45 (20.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 16 SHLLDQVDKDGNTALHLATMENKPKAI 42
+ LL++ D G T LHLA K +
Sbjct: 472 TRLLNEGDLHGMTPLHLAAKNGHDKVV 498
Score = 45 (20.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 9 VHLNSVHSHLLDQVDKDGNTALHLATMENKPKAI 42
+ + + ++D+ D DG T LH A + P ++
Sbjct: 397 MQMQQIKELVMDE-DNDGCTPLHYACRQGGPGSV 429
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 19 LDQVDKDGNTALHLATMENKPKAI 42
+D V+K TA+H A + + +
Sbjct: 265 IDPVEKGRCTAIHFAATQGATEIV 288
>ZFIN|ZDB-GENE-050105-6 [details] [associations]
symbol:trpa1a "transient receptor potential cation
channel, subfamily A, member 1a" species:7955 "Danio rerio"
[GO:0055085 "transmembrane transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005216 "ion channel activity"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0070542
"response to fatty acid" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA;ISS] [GO:0006810 "transport" evidence=IEA]
[GO:0050974 "detection of mechanical stimulus involved in sensory
perception" evidence=IMP] [GO:0015276 "ligand-gated ion channel
activity" evidence=IDA] [GO:0009593 "detection of chemical
stimulus" evidence=IDA] [GO:0050960 "detection of temperature
stimulus involved in thermoception" evidence=IMP] [GO:0008381
"mechanically-gated ion channel activity" evidence=IMP]
InterPro:IPR002110 InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 ZFIN:ZDB-GENE-050105-6 GO:GO:0016021
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0015276 GeneTree:ENSGT00690000102150
GO:GO:0050974 EMBL:BX510360 GO:GO:0009593 GO:GO:0008381
IPI:IPI00508435 Ensembl:ENSDART00000141906 Uniprot:F1R7I3
Length = 1126
Score = 150 (57.9 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 52/170 (30%), Positives = 79/170 (46%)
Query: 3 GYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLSAI 62
GYT TM L + + LL++ D DGNTALHLA A+ D S +
Sbjct: 534 GYTQTMDTLLTSNIKLLNKTDGDGNTALHLAARAGHVAAVRLLLYRGAKIILNKNDASFL 593
Query: 63 DYAIYYKFPEAALAMVTHNTRGTEIMSL---RSDKHPCVTLALVASMPRVFESVQDKSIT 119
A++ E MV + R E M+ S K C+ + ++ +P F+ + D I
Sbjct: 594 HEAVHNARREVT-NMVIESDRCEEAMTTYKPNSTKR-CIVMDMIEFLPESFKHLLDTCIR 651
Query: 120 KANCKKDSKSFYIKYNFSCLQCLRIYPEIN-EKTGDATAISKPIPLPALN 168
++ + ++YI+YNF LQ +P N +KTG ++ PL ALN
Sbjct: 652 ESEEDVNCTNYYIEYNFRWLQ----HPLQNLKKTGMEKDMAYK-PLSALN 696
Score = 145 (56.1 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 40/114 (35%), Positives = 59/114 (51%)
Query: 211 LQVLLHTELERNLPKFLLEKVDKMEIYEYPNEC-KGKLGFLDLVIRKWFCNPFTEDAIDM 269
+Q+ LHT LE LP + +++VD++ I EYPN C GK ++WF E
Sbjct: 984 MQIELHTNLEERLPYWFMKRVDQVTIREYPNRCFSGK--------KRWFFGG-NEVKSRT 1034
Query: 270 VLESNGNDV--FTDEIDKLKRKLNEIQIHLDHQFMFLRLIVHKMDIKTETDERD 321
L + + E+ K K +L EI ++ Q L+LIV KM+I +E DE D
Sbjct: 1035 RLGPTFHQLTPLERELTKQKYRLKEISETMEKQHNLLKLIVQKMEISSEADEHD 1088
Score = 61 (26.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 346 LFSVAVQSVQIYQQKWHYLFDPTNIVALLLFFSATIMIVPL 386
+++V + +Q++QQ+ +YL D +N + A + +VPL
Sbjct: 788 MYAVGKEILQMFQQRLNYLRDLSNYMDWAAAICALLFVVPL 828
Score = 57 (25.1 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 2 SGYTNTMVHLNSVHSHL-LDQVDKDGNTALHLATMENKP 39
+G+ + H+ + H L+ D++GNT LH A +++P
Sbjct: 82 NGHFRIIRHIVQIVGHQELNVRDEEGNTPLHWAVQKDQP 120
Score = 53 (23.7 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
Identities = 15/68 (22%), Positives = 28/68 (41%)
Query: 16 SHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLSAIDYAIYYKFPEAAL 75
+ LL++ D+ G T LHLA+ E K + S + +A + +
Sbjct: 481 TRLLNEGDEKGLTPLHLASREGHVKVVELLLRKGALFHSDYRGWSGLHHAASEGYTQTMD 540
Query: 76 AMVTHNTR 83
++T N +
Sbjct: 541 TLLTSNIK 548
Score = 46 (21.3 bits), Expect = 4.2e-08, Sum P(3) = 4.2e-08
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 169 NTALHLATISHH-------FYRPT--FLDRNLALFFHNCV 199
NTALHLA + H YR L++N A F H V
Sbjct: 558 NTALHLAARAGHVAAVRLLLYRGAKIILNKNDASFLHEAV 597
Score = 41 (19.5 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 168 NNTALHLATISHHFYRPTFL-DRNLALFFHNC 198
N T LH A I HF +L + + F +C
Sbjct: 318 NQTPLHKAVIFDHFELSEYLMSQGANIDFVDC 349
Score = 41 (19.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 13 SVHSHLLDQVDKDGNTALHLA 33
S+ +H+ + VDK ++ LHLA
Sbjct: 236 SIDAHI-NYVDKSCSSPLHLA 255
Score = 41 (19.5 bits), Expect = 1.7e-06, Sum P(3) = 1.7e-06
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 9 VHLNSVHSHLLDQVDKDGNTALHLATME 36
V+L H L + DK G LHLA ++
Sbjct: 367 VNLLLSHGADLTKKDKSGCNFLHLAILQ 394
Score = 40 (19.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 19 LDQVDKDGNTALHLATMENKPKAI 42
+DQ D +TALH A + + +
Sbjct: 274 IDQQQCDKSTALHFACSQGATEVV 297
Score = 39 (18.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 19 LDQVDKDGNTALHLA 33
LDQ K+ +ALH A
Sbjct: 448 LDQKSKEKKSALHFA 462
Score = 39 (18.8 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 5 TNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAI 42
T + H SV LL+ D +G T LH A P ++
Sbjct: 403 TEVLQH-ESVRE-LLNDEDIEGCTPLHYACRLGIPDSV 438
>UNIPROTKB|E1C7Y7 [details] [associations]
symbol:TRPA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002110
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 GO:GO:0016021 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005216
GeneTree:ENSGT00690000102150 EMBL:AADN02024634 IPI:IPI00818282
ProteinModelPortal:E1C7Y7 Ensembl:ENSGALT00000036680 Uniprot:E1C7Y7
Length = 1074
Score = 184 (69.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 57/198 (28%), Positives = 89/198 (44%)
Query: 3 GYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLSAI 62
GYT TM + + D+VD++GNTALHLA E KA+ S
Sbjct: 530 GYTRTMQIILDTNVKCTDKVDEEGNTALHLAAKEGHAKAVRLLLDYGAKILLNKAVASFF 589
Query: 63 DYAIYYKFPEAALAMVTHNTRGTEIMSLR--SDKHPCVTLALVASMPRVFESVQDKSITK 120
AI+ + + ++ H +++ S + C L ++ +P F+ V D I +
Sbjct: 590 HEAIHNRRKDVVSTVILHKRWEEAVLTFSHYSSANKCPLLEMIEYLPDSFKLVLDNCIIE 649
Query: 121 ANCKKDSKSFYIKYNFSCLQCLRIYP-EINEKTGDATAISKPIPLPALNNTALH--LATI 177
++ +K S+ FYI+YNF LQC P +N K +A I PL LN H + +
Sbjct: 650 SSEEKTSRDFYIEYNFRYLQC----PLALNRKLKEAEDIFYE-PLAILNAMVRHNRMELL 704
Query: 178 SHHFYRPTFLDRNLALFF 195
SH + L + +A F
Sbjct: 705 SHPVCKEYLLMKWMAYGF 722
Score = 102 (41.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 34/99 (34%), Positives = 48/99 (48%)
Query: 211 LQVLLHTELERNLPKFLLEKVDKMEIYEYPNECKGKLGFLDLVIRKWFCNPFTEDA--ID 268
+QV LHT LE+ LP + L +VD+ I YPN + GF+ + + C T DA D
Sbjct: 985 MQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPR-YCGFMSVFQYCFGCEDSTTDAQSTD 1043
Query: 269 MVLESNGNDVFTDEIDKLKRKLNEIQIHLDHQFMFLRLI 307
LE E+ K K +L +I L+ Q +LI
Sbjct: 1044 TTLEL--------EVLKQKYRLKDISTLLEKQHDLFKLI 1074
Score = 64 (27.6 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 336 ICGTAISTYMLFSVAVQSVQIYQQKWHYLFDPTNIVALLLFFSATIMIVPLF 387
+C + L + + Q+ QQK YL D +N++ ++ ++ I + LF
Sbjct: 779 VCMCLVLIMSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYSTSIIFVSSLF 830
>UNIPROTKB|E1BZK9 [details] [associations]
symbol:TRPA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005262 "calcium channel activity" evidence=IEA] [GO:0009409
"response to cold" evidence=IEA] [GO:0032421 "stereocilium bundle"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0042542 "response to hydrogen peroxide" evidence=IEA]
[GO:0048265 "response to pain" evidence=IEA] [GO:0050955
"thermoception" evidence=IEA] [GO:0050966 "detection of mechanical
stimulus involved in sensory perception of pain" evidence=IEA]
[GO:0050968 "detection of chemical stimulus involved in sensory
perception of pain" evidence=IEA] InterPro:IPR002110
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 GO:GO:0016021 GO:GO:0042493 GO:GO:0005262
GO:GO:0009409 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0042542
GeneTree:ENSGT00690000102150 GO:GO:0032421 OMA:WLAYGFR
EMBL:AADN02024634 IPI:IPI00586361 ProteinModelPortal:E1BZK9
Ensembl:ENSGALT00000025203 Uniprot:E1BZK9
Length = 1075
Score = 184 (69.8 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 57/198 (28%), Positives = 89/198 (44%)
Query: 3 GYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLSAI 62
GYT TM + + D+VD++GNTALHLA E KA+ S
Sbjct: 530 GYTRTMQIILDTNVKCTDKVDEEGNTALHLAAKEGHAKAVRLLLDYGAKILLNKAVASFF 589
Query: 63 DYAIYYKFPEAALAMVTHNTRGTEIMSLR--SDKHPCVTLALVASMPRVFESVQDKSITK 120
AI+ + + ++ H +++ S + C L ++ +P F+ V D I +
Sbjct: 590 HEAIHNRRKDVVSTVILHKRWEEAVLTFSHYSSANKCPLLEMIEYLPDSFKLVLDNCIIE 649
Query: 121 ANCKKDSKSFYIKYNFSCLQCLRIYP-EINEKTGDATAISKPIPLPALNNTALH--LATI 177
++ +K S+ FYI+YNF LQC P +N K +A I PL LN H + +
Sbjct: 650 SSEEKTSRDFYIEYNFRYLQC----PLALNRKLKEAEDIFYE-PLAILNAMVRHNRMELL 704
Query: 178 SHHFYRPTFLDRNLALFF 195
SH + L + +A F
Sbjct: 705 SHPVCKEYLLMKWMAYGF 722
Score = 102 (41.0 bits), Expect = 1.1e-16, Sum P(2) = 1.1e-16
Identities = 34/99 (34%), Positives = 48/99 (48%)
Query: 211 LQVLLHTELERNLPKFLLEKVDKMEIYEYPNECKGKLGFLDLVIRKWFCNPFTEDA--ID 268
+QV LHT LE+ LP + L +VD+ I YPN + GF+ + + C T DA D
Sbjct: 986 MQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPR-YCGFMSVFQYCFGCEDSTTDAQSTD 1044
Query: 269 MVLESNGNDVFTDEIDKLKRKLNEIQIHLDHQFMFLRLI 307
LE E+ K K +L +I L+ Q +LI
Sbjct: 1045 TTLEL--------EVLKQKYRLKDISTLLEKQHDLFKLI 1075
Score = 64 (27.6 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 336 ICGTAISTYMLFSVAVQSVQIYQQKWHYLFDPTNIVALLLFFSATIMIVPLF 387
+C + L + + Q+ QQK YL D +N++ ++ ++ I + LF
Sbjct: 780 VCMCLVLIMSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYSTSIIFVSSLF 831
>MGI|MGI:3522699 [details] [associations]
symbol:Trpa1 "transient receptor potential cation channel,
subfamily A, member 1" species:10090 "Mus musculus" [GO:0005216
"ion channel activity" evidence=IDA;IMP] [GO:0005262 "calcium
channel activity" evidence=IMP;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0006811 "ion transport" evidence=IEA] [GO:0006816
"calcium ion transport" evidence=IMP;IDA] [GO:0009409 "response to
cold" evidence=IMP;IDA] [GO:0015267 "channel activity"
evidence=IDA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0032421 "stereocilium
bundle" evidence=IDA] [GO:0034220 "ion transmembrane transport"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IDA]
[GO:0042542 "response to hydrogen peroxide" evidence=IMP]
[GO:0048265 "response to pain" evidence=IDA;IMP] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0050955 "thermoception"
evidence=IDA] [GO:0050966 "detection of mechanical stimulus
involved in sensory perception of pain" evidence=IMP] [GO:0050968
"detection of chemical stimulus involved in sensory perception of
pain" evidence=IDA;IMP] [GO:0055085 "transmembrane transport"
evidence=IDA] [GO:0070588 "calcium ion transmembrane transport"
evidence=IMP;IDA] InterPro:IPR002110 InterPro:IPR005821
Pfam:PF00023 Pfam:PF00520 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 MGI:MGI:3522699 GO:GO:0016021 GO:GO:0042493
eggNOG:COG0666 GO:GO:0005262 GO:GO:0050966 GO:GO:0009409
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0050955 GO:GO:0042542
GeneTree:ENSGT00690000102150 GO:GO:0050968 GO:GO:0048265
GO:GO:0032421 KO:K04984 CTD:8989 HOGENOM:HOG000044486
HOVERGEN:HBG059027 OMA:WLAYGFR OrthoDB:EOG49KFPT EMBL:AY231177
EMBL:AK045771 EMBL:BC120563 EMBL:BC131963 IPI:IPI00222774
RefSeq:NP_808449.1 UniGene:Mm.186329 ProteinModelPortal:Q8BLA8
SMR:Q8BLA8 STRING:Q8BLA8 TCDB:1.A.4.6.1 PhosphoSite:Q8BLA8
PRIDE:Q8BLA8 Ensembl:ENSMUST00000041447 GeneID:277328
KEGG:mmu:277328 UCSC:uc007ajc.1 InParanoid:Q8BLA8 BindingDB:Q8BLA8
ChEMBL:CHEMBL1075310 NextBio:393737 Bgee:Q8BLA8
Genevestigator:Q8BLA8 GermOnline:ENSMUSG00000032769 Uniprot:Q8BLA8
Length = 1125
Score = 156 (60.0 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 39/144 (27%), Positives = 64/144 (44%)
Query: 1 MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLS 60
M GYT TM + + D++D++GNTALH A E KA+ S
Sbjct: 524 MGGYTQTMKVILDTNLKCTDRLDEEGNTALHFAAREGHAKAVAMLLSYNADILLNKKQAS 583
Query: 61 AIDYAIYYKFPEAALAMVTHNTRGTEIMSLRSDKHP---CVTLALVASMPRVFESVQDKS 117
+ A++ K E L + N R E + + + P C + +V +P + + D
Sbjct: 584 FLHIALHNKRKEVVLTTI-RNKRWDECLQVFTHNSPSNRCPIMEMVEYLPECMKVLLDFC 642
Query: 118 ITKANCKKDSKSFYIKYNFSCLQC 141
+ + K + ++I+YNF LQC
Sbjct: 643 MIPSTEDKSCQDYHIEYNFKYLQC 666
Score = 123 (48.4 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 38/116 (32%), Positives = 60/116 (51%)
Query: 211 LQVLLHTELERNLPKFLLEKVDKMEIYEYPNECK-GKLGFLDLVIRKWFCNPFTEDAIDM 269
+QV LHT LE+ LP + L KVD+ YPN + G++ L +F N ++
Sbjct: 981 MQVELHTNLEKKLPLWYLRKVDQRSTIVYPNRPRHGRM----LRFFHYFLN--MQETRQE 1034
Query: 270 VLESNGNDVFTDEIDKLKRKLNEIQIHLDHQFMFLRLIVHKMDIKTETDERDEGTS 325
V N + EI K K +L ++ L+ Q ++LI+ KM+I +ET++ D S
Sbjct: 1035 V--PNIDTCLEMEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETEDEDNHCS 1088
Score = 82 (33.9 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 323 GTSSNKE--LHPL----LYICGTAISTYMLFSVAVQSVQIYQQKWHYLFDPTNIVALLLF 376
GTSS E + L + IC + +F + +QI+QQK +Y D N + +++
Sbjct: 756 GTSSTHEERIDTLNSFPIKICMILVFLSSIFGYCKEVIQIFQQKRNYFLDYNNALEWVIY 815
Query: 377 FSATIMIVPLF 387
++ I ++PLF
Sbjct: 816 TTSIIFVLPLF 826
Score = 51 (23.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 29/148 (19%), Positives = 58/148 (39%)
Query: 11 LNSVHSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDL-SAIDYAIYYK 69
+N +L+ +D GNT LH A +N+ +++ ++ S + A++
Sbjct: 84 INGSSCEVLNIMDGYGNTPLHCAAEKNQVESVKFLLSQGANPNLRNRNMMSPLHIAVHGM 143
Query: 70 FPEAALAMVTHNTRGTEIMSLRSDKHPCVTLALVAS-MPRVFESVQDKSITKANCKKDSK 128
+ E + H + T I +L + ++ A + + +K K CK +
Sbjct: 144 YNEVIKVLTEH--KATNI-NLEGENGNTALMSTCAKDNSEALQILLEKG-AKL-CKSNKW 198
Query: 129 SFYIKYN--FS-CLQCLRIYPEINEKTG 153
Y + FS +C+ + EK G
Sbjct: 199 GDYPVHQAAFSGAKKCMELILAYGEKNG 226
Score = 45 (20.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 16 SHLLDQVDKDGNTALHLATMENKPKAI 42
+ LL++ D G T LHLA K +
Sbjct: 473 TRLLNEGDLHGMTPLHLAAKNGHDKVV 499
Score = 44 (20.5 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 9 VHLNSVHSHLLDQVDKDGNTALHLATMENKPKAI 42
+ + + ++D+ D DG T LH A + P ++
Sbjct: 398 MQMQHIKELVMDE-DNDGCTPLHYACRQGVPVSV 430
>UNIPROTKB|F1Q2M0 [details] [associations]
symbol:TRPA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR005821 Pfam:PF00023 Pfam:PF00520 PRINTS:PR01415
PROSITE:PS50088 SMART:SM00248 GO:GO:0016021 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0005216 GeneTree:ENSGT00690000102150 OMA:WLAYGFR
EMBL:AAEX03015864 Ensembl:ENSCAFT00000012682 Uniprot:F1Q2M0
Length = 1117
Score = 186 (70.5 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 71/275 (25%), Positives = 111/275 (40%)
Query: 1 MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLS 60
+ GYT TM + + D +D++GNTALH A E KA+ S
Sbjct: 524 LGGYTQTMKVILDTNLKCTDLLDEEGNTALHFAAREGHAKAVALLLSYDAAIVLNKQQAS 583
Query: 61 AIDYAIYYKFPEAALAMVTHNTRGTEIMSLRSDKHP---CVTLALVASMPRVFESVQDKS 117
+ AI+ K E L + N R E + + S P C L +V +P + + D
Sbjct: 584 FLHVAIHNKRKEVVLTTIK-NKRWEECLEVFSHYSPSNGCPVLEMVEYLPECMKVLLDCC 642
Query: 118 ITKANCKKDSKSFYIKYNFSCLQCLRIYPEINEKTGDATAISKPIPLPALNNTALH--LA 175
I + K + ++I+YNF+ LQC + + T D T PL LN H +
Sbjct: 643 IIPSTRDKSCEDYHIEYNFTYLQCPLEFTKKVTPTQDVTYE----PLTTLNAMVQHNRIE 698
Query: 176 TISHHFYRPTFLDRNLALFFHNCVF-VGS---NPTPTLFLQVLLHTELERNLPKFLLEKV 231
++H + L + LA F + +GS P FL V + + N + E
Sbjct: 699 LLNHPVCKEYLLMKWLAYGFRAHIMNLGSYCLGLLPMTFLVVSIKPGMAFNSTGIINETT 758
Query: 232 DKMEIYEYPNECKGKLGFLDLVIRKWF--CNPFTE 264
D EI + N K+ + + + F C T+
Sbjct: 759 DHSEILDTKNSYSIKVCMILVFLSSIFGYCKEVTQ 793
Score = 146 (56.5 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 39/117 (33%), Positives = 61/117 (52%)
Query: 211 LQVLLHTELERNLPKFLLEKVDKMEIYEYPNE--CKGKLGFLDLVIRKWFCNPFTEDAID 268
+QV LHT LE+ LP + L KVD+ I YPN C G L + +T++A
Sbjct: 980 MQVELHTSLEKKLPLWFLRKVDQKSIVVYPNRPRCTGLLRIFHFIF-------YTKEARQ 1032
Query: 269 MVLESNGNDVFTDEIDKLKRKLNEIQIHLDHQFMFLRLIVHKMDIKTETDERDEGTS 325
+ N + EI K K +L ++ L+ Q ++LI+ KM+I +ET++ D +S
Sbjct: 1033 EI--PNVDTSLEIEISKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETEDEDNHSS 1087
Score = 85 (35.0 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 336 ICGTAISTYMLFSVAVQSVQIYQQKWHYLFDPTNIVALLLFFSATIMIVPLF 387
+C + +F + QI+QQK +Y+ D N V +++ ++ I ++PLF
Sbjct: 774 VCMILVFLSSIFGYCKEVTQIFQQKRNYMLDQANAVEWIIYTTSIIFVLPLF 825
Score = 53 (23.7 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 34/168 (20%), Positives = 68/168 (40%)
Query: 18 LLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLSA-IDYAIYYKFPEAALA 76
+L+ +D GNT LH A +N+ +++ ++ A + A+ E
Sbjct: 91 VLNVMDDYGNTPLHWAAEKNQVESVKFLLSKGANPNLRNSNMMAPLHIAVQGLHNEVIKV 150
Query: 77 MVTHNTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSITKANCKKDSKSFYIKYN- 135
+ HN+ T+I + + V +A + + + +K CK + + +
Sbjct: 151 LTEHNS--TDINLEGENGNTAVIIACLKDNSEALQILLNKGAKP--CKSNKWGCFPIHQA 206
Query: 136 -FS-CLQCLRIYPEINEKTGDATAISKPIPLPALNN---TALHLATIS 178
FS +C+ I + E+ G S+ + +NN + LH+A S
Sbjct: 207 AFSGAKKCMEIILKFGEEHG----YSRQSHINFVNNGKSSPLHMAVQS 250
>RGD|1303284 [details] [associations]
symbol:Trpa1 "transient receptor potential cation channel,
subfamily A, member 1" species:10116 "Rattus norvegicus"
[GO:0005216 "ion channel activity" evidence=ISO] [GO:0005262
"calcium channel activity" evidence=IEA;ISO] [GO:0006811 "ion
transport" evidence=IEA] [GO:0006816 "calcium ion transport"
evidence=ISO] [GO:0009409 "response to cold" evidence=IEA;ISO]
[GO:0015267 "channel activity" evidence=ISO] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0032421 "stereocilium bundle"
evidence=IEA;ISO] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0042493 "response to drug" evidence=IEA;ISO]
[GO:0042542 "response to hydrogen peroxide" evidence=IEA;ISO]
[GO:0048265 "response to pain" evidence=IEA;ISO] [GO:0050896
"response to stimulus" evidence=IEA] [GO:0050955 "thermoception"
evidence=IEA;ISO] [GO:0050966 "detection of mechanical stimulus
involved in sensory perception of pain" evidence=IEA;ISO]
[GO:0050968 "detection of chemical stimulus involved in sensory
perception of pain" evidence=IEA;ISO] [GO:0055085 "transmembrane
transport" evidence=ISO] [GO:0070588 "calcium ion transmembrane
transport" evidence=ISO] InterPro:IPR002110 Pfam:PF00023
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 RGD:1303284
GO:GO:0016021 GO:GO:0042493 eggNOG:COG0666 GO:GO:0005262
GO:GO:0050966 GO:GO:0009409 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0050955
GO:GO:0042542 GO:GO:0050968 GO:GO:0048265 GO:GO:0032421 KO:K04984
CTD:8989 HOGENOM:HOG000044486 HOVERGEN:HBG059027 OrthoDB:EOG49KFPT
EMBL:AY496961 IPI:IPI00411253 RefSeq:NP_997491.1 UniGene:Rn.105247
ProteinModelPortal:Q6RI86 STRING:Q6RI86 PRIDE:Q6RI86 GeneID:312896
KEGG:rno:312896 UCSC:RGD:1303284 InParanoid:Q6RI86 BindingDB:Q6RI86
ChEMBL:CHEMBL5160 NextBio:665335 ArrayExpress:Q6RI86
Genevestigator:Q6RI86 Uniprot:Q6RI86
Length = 1125
Score = 150 (57.9 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 38/144 (26%), Positives = 64/144 (44%)
Query: 1 MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLS 60
M GYT TM + + D++D++GNTALH A E KA+ S
Sbjct: 524 MGGYTQTMKVILDTNLKCTDRLDEEGNTALHFAAREGHAKAVAMLLSYNADILLNKKQAS 583
Query: 61 AIDYAIYYKFPEAALAMVTHNTRGTEIMSLRSDKHP---CVTLALVASMPRVFESVQDKS 117
+ A++ K E L + + R E + + + P C + +V +P + + D
Sbjct: 584 FLHIALHNKRKEVVLTTI-RSKRWDECLQVFTHDSPSNRCPIMEMVEYLPECMKVLLDFC 642
Query: 118 ITKANCKKDSKSFYIKYNFSCLQC 141
+ + K + ++I+YNF LQC
Sbjct: 643 MIPSTEDKSCQDYHIEYNFKYLQC 666
Score = 119 (46.9 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 39/117 (33%), Positives = 58/117 (49%)
Query: 211 LQVLLHTELERNLPKFLLEKVDKMEIYEYPNECK-GK-LGFLDLVIRKWFCNPFTEDAID 268
+QV LHT LE+ LP + L KVD+ YPN + G+ L F + + ID
Sbjct: 981 MQVELHTNLEKKLPFWYLRKVDQRSTIVYPNRPRHGRMLRFFHYFLSMQETRQEAPN-ID 1039
Query: 269 MVLESNGNDVFTDEIDKLKRKLNEIQIHLDHQFMFLRLIVHKMDIKTETDERDEGTS 325
LE EI K K +L ++ L+ Q ++LI+ KM+I +ET++ D S
Sbjct: 1040 TCLEM--------EILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETEDEDNHCS 1088
Score = 84 (34.6 bits), Expect = 6.1e-11, Sum P(2) = 6.1e-11
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 334 LYICGTAISTYMLFSVAVQSVQIYQQKWHYLFDPTNIVALLLFFSATIMIVPLF 387
L IC + +F + VQI+QQK +Y D N + +++ ++ I ++PLF
Sbjct: 773 LKICMILVFLSSIFGYCKEVVQIFQQKRNYFLDYNNALEWVIYTTSMIFVLPLF 826
Score = 52 (23.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 30/148 (20%), Positives = 57/148 (38%)
Query: 11 LNSVHSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLSA-IDYAIYYK 69
+N L+ +D GNT LH A +N+ +++ ++ A + A+
Sbjct: 84 INGSSCEALNVMDDYGNTPLHWAAEKNQVESVKFLLSQGANPNLRNRNMMAPLHIAVQGM 143
Query: 70 FPEAALAMVTHNTRGTEIMSLRSDKHPCVTLALVAS-MPRVFESVQDKSITKANCKKDSK 128
+ E + H + T I +L + ++ A + + +K K CK +
Sbjct: 144 YNEVIKVLTEH--KATNI-NLEGENGNTALMSTCAKDNSEALQILLEKG-AKL-CKSNKW 198
Query: 129 SFYIKYN--FS-CLQCLRIYPEINEKTG 153
Y + FS +C+ + EKTG
Sbjct: 199 GDYPVHQAAFSGAKRCMELILAYGEKTG 226
>UNIPROTKB|H0YAW0 [details] [associations]
symbol:TRPA1 "Transient receptor potential cation channel
subfamily A member 1" species:9606 "Homo sapiens" [GO:0005216 "ion
channel activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR002110 InterPro:IPR005821 Pfam:PF00520
PRINTS:PR01415 PROSITE:PS50088 SMART:SM00248 GO:GO:0016021
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0005216 EMBL:AC022867 HGNC:HGNC:497
EMBL:AC016057 Ensembl:ENST00000523582 Bgee:H0YAW0 Uniprot:H0YAW0
Length = 916
Score = 179 (68.1 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 66/251 (26%), Positives = 106/251 (42%)
Query: 1 MSGYTNTMVHLNSVHSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLS 60
M GYT TM + + D++D+DGNTALH A E KA+ S
Sbjct: 375 MGGYTQTMKVILDTNLKCTDRLDEDGNTALHFAAREGHAKAVALLLSHNADIVLNKQQAS 434
Query: 61 AIDYAIYYKFPEAALAMVTHNTRGTEIMSLRSDKHP---CVTLALVASMPRVFESVQDKS 117
+ A++ K E L ++ + R E + + S P C ++ +P + + D
Sbjct: 435 FLHLALHNKRKEVVLTII-RSKRWDECLKIFSHNSPGNKCPITEMIEYLPECMKVLLDFC 493
Query: 118 ITKANCKKDSKSFYIKYNFSCLQCLRIYP-EINEKTGDATAISKPIP-LPAL-NNTALHL 174
+ + K + +YI+YNF LQC P E +KT I +P+ L A+ N + L
Sbjct: 494 MLHSTEDKSCRDYYIEYNFKYLQC----PLEFTKKTPTQDVIYEPLTALNAMVQNNRIEL 549
Query: 175 ATISHHFYRPTFLDRNLALFFH-NCVFVGS---NPTPTLFLQVLLHTELERNLPKFLLEK 230
++H + L + LA F + + +GS P L V + + N + E
Sbjct: 550 --LNHPVCKEYLLMKWLAYGFRAHMMNLGSYCLGLIPMTILVVNIKPGMAFNSTGIINET 607
Query: 231 VDKMEIYEYPN 241
D EI + N
Sbjct: 608 SDHSEILDTTN 618
Score = 85 (35.0 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 313 IKTETDERDEGTSSNKELHPLLYICGTAISTYMLFSVAVQSVQIYQQKWHYLFDPTNIVA 372
I ET + E + L+ C + +F ++ QI+QQK +Y D +N++
Sbjct: 603 IINETSDHSEILDTTNSY--LIKTCMILVFLSSIFGYCKEAGQIFQQKRNYFMDISNVLE 660
Query: 373 LLLFFSATIMIVPLFTK 389
+++ + I ++PLF +
Sbjct: 661 WIIYTTGIIFVLPLFVE 677
>UNIPROTKB|I3LEM4 [details] [associations]
symbol:I3LEM4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005216 "ion channel activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR005821 Pfam:PF00520 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 GO:GO:0016021 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005216
GeneTree:ENSGT00690000102150 Ensembl:ENSSSCT00000028735 OMA:SSENTIH
Uniprot:I3LEM4
Length = 1089
Score = 153 (58.9 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 42/115 (36%), Positives = 60/115 (52%)
Query: 211 LQVLLHTELERNLPKFLLEKVDKMEIYEYPNECKGKLGFLDLVIRKWFCNPFTEDAIDMV 270
+QV LHT LE+ LP + L KVD+ I YPN + G L V+ FC T I V
Sbjct: 949 MQVELHTSLEKKLPLWFLHKVDQKSITVYPNRPRYSGGLLRGVLHYIFCPQETRQEIPNV 1008
Query: 271 LESNGNDVFTDEIDKLKRKLNEIQIHLDHQFMFLRLIVHKMDIKTETDERDEGTS 325
S EI K K +L ++ L+ Q ++LI+ KM+I +ET++ D +S
Sbjct: 1009 DTS-----LETEIMKQKYRLKDLSSLLEKQHDLIKLIIQKMEIISETEDEDYQSS 1058
Score = 84 (34.6 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 19/75 (25%), Positives = 36/75 (48%)
Query: 313 IKTETDERDEGTSSNKELHPLLYICGTAISTYMLFSVAVQSVQIYQQKWHYLFDPTNIVA 372
I ET + E + + +C + +F + QI+QQK +Y FD +N +
Sbjct: 722 IINETSDHSEILDTKNSY--TINVCMILVLLSSIFGYCKEVAQIFQQKRNYFFDNSNALE 779
Query: 373 LLLFFSATIMIVPLF 387
+++ ++ I + PLF
Sbjct: 780 WIIYTTSIIFVSPLF 794
Score = 83 (34.3 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 50/227 (22%), Positives = 82/227 (36%)
Query: 25 DGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLSAIDYAIYYKFPEAALAMVTHNTRG 84
D N+ HL + EN+P + I + E ++ R
Sbjct: 517 DRNSGKHLGSFENEPPVTKYMMYTWVKVSCMTSSENTIHFMTSGGKRELYFIIIIFY-RW 575
Query: 85 TEIMSLRSDKHP---CVTLALVASMPRVFESVQDKSITKANCKKDSKSFYIKYNFSCLQC 141
E + S P C + +V +P + + D + + K S ++I+YNF LQC
Sbjct: 576 EECLMTFSHYSPSNRCPVMEMVEYLPECMKVLLDFCMMPSTEDKSSPDYHIEYNFRYLQC 635
Query: 142 LRIYP-EINEKTGDATAISKPIPLPALNNTALH--LATISHHFYRPTFLDRNLALFFHNC 198
P E +K ++ PL LN H + ++H + L + A F
Sbjct: 636 ----PLEFTKKVALVQDVTYE-PLSTLNAMVQHNRIELLNHPVCKEYLLMKWWAYGFRAH 690
Query: 199 VF-VGS---NPTPTLFLQVLLHTELERNLPKFLLEKVDKMEIYEYPN 241
V +GS P FL + + + N + E D EI + N
Sbjct: 691 VMNLGSYCLGLLPMTFLVISIRPGMAFNSTGIINETSDHSEILDTKN 737
Score = 57 (25.1 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 35/171 (20%), Positives = 70/171 (40%)
Query: 15 HSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDLSA-IDYAIYYKFPEA 73
++ +L+ +D GNT LH A +N+ ++I ++ A + A+ E
Sbjct: 56 YATVLNAMDDYGNTPLHWAAEKNQVESIKFLLRKGANPNLRNCNMMAPLHVAVQRLNNEV 115
Query: 74 ALAMVTHNTRGTEIMSLRSDKHPCVTLALVASMPRVFESVQDKSITKANCKKDSKSFYIK 133
++ H+ GT+I + + + +A E + +K CK + +
Sbjct: 116 MKVLIEHS--GTDINLEGENGNTALIIACFTDNSEAVELLLNKGAKP--CKSNKWGCFPI 171
Query: 134 YN--FS-CLQCLRIYPEINEKTGDATAISKPIPLPALNN---TALHLATIS 178
+ FS +C+ I + E+ G S+ + +NN + LH+A S
Sbjct: 172 HQAAFSGAKKCMEIILKFGEENG----YSRVAHINFVNNRKVSPLHMAVQS 218
Score = 46 (21.3 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 3 GYTNTMVHL--NSVHSHLLDQVDKDGNTALHLATMENKPKAI 42
G NT L + + LL++ D G T LHLA K +
Sbjct: 427 GRINTCQRLLQDMSDTRLLNEGDLHGMTPLHLAAKNGHDKVV 468
Score = 46 (21.3 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 24/130 (18%), Positives = 48/130 (36%)
Query: 9 VHLNSVHSHLLDQVDKDGNTALHLATMENKPKAIXXXXXXXXXXXXXXMDL-SAIDYAIY 67
+ + + ++D+ D DG T LH A + P ++ D S + +A
Sbjct: 367 LQMQHIKELVMDE-DNDGCTPLHYACRQGVPVSVNNLLDFNVSIHSKNKDKKSPLHFAAS 425
Query: 68 YKFPEAALAMVTHNTRGTEIMSLRSDKHPCVTLALVASM--PRVFESVQDKSITKANCKK 125
Y ++ + T +++ D H L L A +V + + K +
Sbjct: 426 YGRINTCQRLL-QDMSDTRLLN-EGDLHGMTPLHLAAKNGHDKVVQLLLKKGALFLSFHA 483
Query: 126 DSKSFYIKYN 135
K ++ K+N
Sbjct: 484 SWKDYHCKFN 493
Score = 37 (18.1 bits), Expect = 9.3e-11, Sum P(3) = 9.3e-11
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 19 LDQVDKDGNTALHLATMENKPKAI 42
LD ++K TALH A + + +
Sbjct: 234 LDLMEKGKCTALHFAATQGATEIV 257
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.137 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 420 386 0.00092 117 3 11 22 0.48 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 612 (65 KB)
Total size of DFA: 252 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.34u 0.10s 35.44t Elapsed: 00:00:17
Total cpu time: 35.35u 0.10s 35.45t Elapsed: 00:00:17
Start: Thu Aug 15 13:44:09 2013 End: Thu Aug 15 13:44:26 2013