Query psy8766
Match_columns 135
No_of_seqs 147 out of 1921
Neff 11.7
Searched_HMMs 29240
Date Fri Aug 16 18:42:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8766.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8766hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 100.0 5.1E-35 1.7E-39 171.1 9.4 119 2-134 26-144 (169)
2 3c5r_A BARD-1, BRCA1-associate 100.0 3.5E-32 1.2E-36 154.2 9.7 118 3-135 1-118 (137)
3 1d9s_A Cyclin-dependent kinase 100.0 2.4E-32 8.3E-37 154.7 6.1 117 3-134 2-119 (136)
4 4b93_B Ankyrin repeat domain-c 100.0 3.3E-31 1.1E-35 165.1 11.7 127 2-135 75-227 (269)
5 1sw6_A Regulatory protein SWI6 100.0 5.5E-31 1.9E-35 168.1 12.3 134 2-135 119-325 (327)
6 4b93_B Ankyrin repeat domain-c 100.0 1.1E-31 3.8E-36 167.3 7.2 123 5-134 44-193 (269)
7 2y1l_E Darpin-8.4; hydrolase-i 100.0 5.9E-31 2E-35 153.8 9.4 119 2-134 36-154 (169)
8 3f6q_A Integrin-linked protein 100.0 1.5E-30 5E-35 153.4 10.7 119 2-134 28-146 (179)
9 3v31_A Ankyrin repeat family A 100.0 1.6E-30 5.5E-35 151.6 9.8 119 2-134 25-143 (167)
10 3twr_A Tankyrase-2; ankyrin re 100.0 3.3E-30 1.1E-34 150.1 11.0 120 2-135 31-150 (165)
11 4gpm_A Engineered protein OR26 100.0 2.2E-30 7.5E-35 151.4 9.2 106 2-121 59-164 (169)
12 3v30_A DNA-binding protein rfx 100.0 1.9E-29 6.6E-34 147.7 12.0 118 3-134 25-143 (172)
13 2rfm_A Putative ankyrin repeat 100.0 3.1E-30 1.1E-34 153.5 8.8 118 3-134 58-175 (192)
14 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.8E-30 6.3E-35 150.6 7.2 118 2-134 27-145 (162)
15 1awc_B Protein (GA binding pro 100.0 2.8E-29 9.6E-34 144.6 12.1 118 2-134 24-141 (153)
16 1s70_B 130 kDa myosin-binding 100.0 5.4E-29 1.8E-33 156.8 13.4 66 2-67 62-127 (299)
17 3aaa_C Myotrophin, protein V-1 100.0 7.2E-29 2.5E-33 138.1 12.0 112 10-135 4-115 (123)
18 2rfa_A Transient receptor pote 100.0 1.2E-29 4.1E-34 154.7 9.3 133 2-135 26-163 (232)
19 2dzn_A Probable 26S proteasome 100.0 3.7E-29 1.2E-33 152.1 10.4 118 4-135 98-217 (228)
20 3utm_A Tankyrase-1; tankyrase, 100.0 1E-28 3.5E-33 158.1 12.4 133 2-134 80-288 (351)
21 1ikn_D Protein (I-kappa-B-alph 100.0 9.3E-29 3.2E-33 151.2 11.7 133 3-135 35-193 (236)
22 3aji_A 26S proteasome non-ATPa 100.0 4.4E-29 1.5E-33 152.1 9.8 126 2-134 62-213 (231)
23 2xai_A ASB-9, ankyrin repeat a 100.0 1.1E-28 3.7E-33 153.1 11.5 132 2-134 25-207 (261)
24 2rfm_A Putative ankyrin repeat 100.0 1.6E-29 5.3E-34 150.5 7.2 115 6-134 28-142 (192)
25 1bd8_A P19INK4D CDK4/6 inhibit 100.0 1.9E-29 6.6E-34 145.5 7.2 116 3-134 26-141 (156)
26 1yyh_A HN1;, notch 1, ankyrin 100.0 7.7E-29 2.6E-33 153.1 10.0 57 10-66 54-110 (253)
27 3hra_A Ankyrin repeat family p 100.0 6E-29 2E-33 148.7 9.2 132 3-134 29-186 (201)
28 2jab_A H10-2-G3; HER2, darpin, 100.0 2.3E-29 7.8E-34 142.4 6.9 111 10-134 11-121 (136)
29 2f8y_A Notch homolog 1, transl 100.0 3.5E-28 1.2E-32 147.5 12.4 126 2-134 13-166 (223)
30 3aji_A 26S proteasome non-ATPa 100.0 9.2E-29 3.1E-33 150.7 9.5 131 4-134 31-180 (231)
31 1oy3_D Transcription factor in 100.0 5.8E-29 2E-33 155.3 8.7 118 3-134 148-266 (282)
32 1yyh_A HN1;, notch 1, ankyrin 100.0 5.5E-29 1.9E-33 153.8 8.2 126 2-134 79-231 (253)
33 1oy3_D Transcription factor in 100.0 1.1E-28 3.8E-33 154.0 8.8 130 6-135 38-234 (282)
34 3b7b_A Euchromatic histone-lys 100.0 1.6E-27 5.5E-32 145.7 13.5 118 4-135 102-219 (237)
35 1ikn_D Protein (I-kappa-B-alph 100.0 5.1E-29 1.7E-33 152.4 6.8 127 7-134 2-159 (236)
36 3hra_A Ankyrin repeat family p 100.0 2.2E-28 7.4E-33 146.3 9.2 108 2-116 61-201 (201)
37 1k1a_A B-cell lymphoma 3-encod 100.0 1.1E-27 3.7E-32 146.6 12.5 67 2-68 35-101 (241)
38 3t8k_A Uncharacterized protein 100.0 3.9E-29 1.3E-33 148.2 5.9 123 5-135 29-163 (186)
39 1k1a_A B-cell lymphoma 3-encod 100.0 3.8E-28 1.3E-32 148.7 10.3 117 5-135 108-225 (241)
40 3ehr_A Osteoclast-stimulating 100.0 3.7E-28 1.3E-32 147.5 10.2 115 7-135 67-182 (222)
41 3d9h_A CDNA FLJ77766, highly s 100.0 6.8E-28 2.3E-32 151.2 11.4 132 2-134 81-263 (285)
42 1n0r_A 4ANK, 4 ankyrin repeats 100.0 2.3E-28 7.7E-33 136.3 8.1 109 12-134 1-109 (126)
43 3deo_A Signal recognition part 100.0 5.3E-29 1.8E-33 147.3 5.3 110 10-134 41-151 (183)
44 2etb_A Transient receptor pote 100.0 6.1E-29 2.1E-33 153.7 5.4 119 2-134 28-180 (256)
45 1ycs_B 53BP2, P53BP2; ankyrin 100.0 3.1E-28 1.1E-32 149.4 8.4 117 2-133 27-144 (239)
46 3b7b_A Euchromatic histone-lys 100.0 1.4E-27 4.9E-32 145.9 11.4 133 2-134 33-185 (237)
47 1n11_A Ankyrin; clathrin, BAND 100.0 4.6E-28 1.6E-32 159.5 9.8 119 2-134 267-385 (437)
48 1bi7_B P16INK4A, MTS1, multipl 100.0 6.6E-29 2.3E-33 143.5 5.0 110 10-134 9-119 (156)
49 1n11_A Ankyrin; clathrin, BAND 100.0 2.2E-28 7.7E-33 161.0 8.1 119 2-134 3-121 (437)
50 2f8y_A Notch homolog 1, transl 100.0 6E-28 2E-32 146.4 9.4 116 5-134 84-199 (223)
51 2vge_A RELA-associated inhibit 100.0 1.1E-27 3.7E-32 146.2 10.3 118 2-133 7-128 (229)
52 3jxi_A Vanilloid receptor-rela 100.0 1.1E-28 3.6E-33 152.9 5.8 121 4-135 84-234 (260)
53 1bi7_B P16INK4A, MTS1, multipl 100.0 3.6E-28 1.2E-32 140.4 7.5 117 2-133 34-151 (156)
54 2xai_A ASB-9, ankyrin repeat a 100.0 1.6E-27 5.4E-32 147.9 10.9 117 2-135 123-247 (261)
55 2etb_A Transient receptor pote 99.9 3.9E-28 1.3E-32 150.1 6.3 116 9-135 86-230 (256)
56 4hbd_A KN motif and ankyrin re 99.9 4.1E-28 1.4E-32 151.6 6.4 122 6-134 104-258 (276)
57 3ljn_A Hypothetical protein; a 99.9 3.6E-28 1.2E-32 156.8 6.1 120 6-134 131-252 (364)
58 2dzn_A Probable 26S proteasome 99.9 1.8E-27 6.2E-32 144.6 8.8 112 9-134 68-182 (228)
59 3kea_A K1L; tropism, ANK repea 99.9 8.1E-28 2.8E-32 150.9 7.3 114 5-134 23-137 (285)
60 3d9h_A CDNA FLJ77766, highly s 99.9 4.7E-27 1.6E-31 147.4 10.5 103 2-121 179-282 (285)
61 2fo1_E LIN-12 protein; beta-ba 99.9 3.8E-27 1.3E-31 152.7 10.3 123 2-135 155-288 (373)
62 3ui2_A Signal recognition part 99.9 4.5E-28 1.5E-32 149.1 5.5 110 10-134 42-152 (244)
63 2rfa_A Transient receptor pote 99.9 2.5E-27 8.7E-32 144.5 8.8 115 7-135 69-206 (232)
64 3utm_A Tankyrase-1; tankyrase, 99.9 6.1E-27 2.1E-31 149.9 10.5 119 2-134 47-165 (351)
65 3v31_A Ankyrin repeat family A 99.9 2.3E-27 7.9E-32 138.2 7.9 109 12-134 2-110 (167)
66 4hbd_A KN motif and ankyrin re 99.9 8.2E-28 2.8E-32 150.3 6.0 102 2-116 172-273 (276)
67 2pnn_A Transient receptor pote 99.9 1.1E-27 3.9E-32 149.3 6.3 115 9-134 97-241 (273)
68 3ljn_A Hypothetical protein; a 99.9 6.1E-27 2.1E-31 151.1 9.9 132 2-135 42-220 (364)
69 2l6b_A NR1C; ankyrin, consensu 99.9 1.1E-26 3.7E-31 127.9 9.1 111 7-131 3-113 (115)
70 1n0q_A 3ANK, 3 ankyrin repeats 99.9 9.6E-27 3.3E-31 123.6 8.5 93 12-118 1-93 (93)
71 3kea_A K1L; tropism, ANK repea 99.9 2.6E-27 8.7E-32 148.7 7.3 116 3-134 85-203 (285)
72 2vge_A RELA-associated inhibit 99.9 2.6E-27 8.8E-32 144.5 6.2 103 2-118 43-148 (229)
73 2y1l_E Darpin-8.4; hydrolase-i 99.9 6.4E-27 2.2E-31 136.7 7.5 111 10-134 11-121 (169)
74 3eu9_A Huntingtin-interacting 99.9 2.1E-26 7.2E-31 140.6 9.8 132 3-134 65-218 (240)
75 1wdy_A 2-5A-dependent ribonucl 99.9 2E-26 7E-31 143.7 9.4 119 2-134 27-156 (285)
76 3jxi_A Vanilloid receptor-rela 99.9 5.2E-27 1.8E-31 145.3 6.7 119 2-134 31-184 (260)
77 2b0o_E UPLC1; arfgap, structur 99.9 6.4E-27 2.2E-31 147.8 6.7 114 2-135 173-295 (301)
78 3v30_A DNA-binding protein rfx 99.9 1.3E-26 4.6E-31 135.6 6.8 114 2-129 58-171 (172)
79 1ihb_A P18-INK4C(INK6), cyclin 99.9 5.8E-26 2E-30 131.6 9.3 104 2-118 59-162 (162)
80 2fo1_E LIN-12 protein; beta-ba 99.9 9.5E-27 3.2E-31 150.8 6.6 133 2-134 188-354 (373)
81 2jab_A H10-2-G3; HER2, darpin, 99.9 7.7E-26 2.6E-30 127.9 9.4 101 2-116 36-136 (136)
82 1d9s_A Cyclin-dependent kinase 99.9 6.6E-27 2.3E-31 132.3 4.6 102 2-118 34-136 (136)
83 1wdy_A 2-5A-dependent ribonucl 99.9 9.4E-26 3.2E-30 140.7 10.0 133 2-134 61-227 (285)
84 3eu9_A Huntingtin-interacting 99.9 1.1E-25 3.7E-30 137.5 10.0 119 2-134 31-150 (240)
85 1s70_B 130 kDa myosin-binding 99.9 3.7E-26 1.3E-30 143.9 8.1 112 10-135 37-148 (299)
86 4g8k_A 2-5A-dependent ribonucl 99.9 2E-25 6.8E-30 142.7 11.6 134 2-135 114-282 (337)
87 3twr_A Tankyrase-2; ankyrin re 99.9 2.9E-26 1E-30 133.3 5.8 112 9-134 4-116 (165)
88 1awc_B Protein (GA binding pro 99.9 2.9E-25 9.9E-30 127.7 9.9 107 13-134 2-108 (153)
89 2pnn_A Transient receptor pote 99.9 5.8E-25 2E-29 137.0 12.0 129 2-130 123-271 (273)
90 3f6q_A Integrin-linked protein 99.9 1.1E-25 3.7E-30 132.6 8.1 110 11-134 3-113 (179)
91 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.9E-26 6.5E-31 141.4 4.5 119 2-134 59-189 (239)
92 1n0r_A 4ANK, 4 ankyrin repeats 99.9 6.1E-25 2.1E-29 122.3 9.4 103 2-118 24-126 (126)
93 1bd8_A P19INK4D CDK4/6 inhibit 99.9 6.4E-25 2.2E-29 126.5 9.2 99 2-115 57-155 (156)
94 3lvq_E ARF-GAP with SH3 domain 99.9 3E-25 1E-29 148.4 8.2 110 2-125 154-272 (497)
95 1dcq_A PYK2-associated protein 99.9 1.3E-24 4.3E-29 136.0 9.0 99 6-118 162-263 (278)
96 4g8k_A 2-5A-dependent ribonucl 99.9 6.4E-24 2.2E-28 135.8 12.0 117 11-134 23-176 (337)
97 3jue_A Arfgap with coiled-coil 99.9 7.1E-25 2.4E-29 141.6 6.9 109 12-134 198-309 (368)
98 3t8k_A Uncharacterized protein 99.9 2.7E-24 9.2E-29 127.4 7.7 113 2-123 64-184 (186)
99 2b0o_E UPLC1; arfgap, structur 99.9 5.3E-24 1.8E-28 134.5 8.6 108 13-134 151-267 (301)
100 3ehr_A Osteoclast-stimulating 99.9 1E-24 3.5E-29 132.3 4.7 112 2-127 95-207 (222)
101 3jue_A Arfgap with coiled-coil 99.9 8.1E-24 2.8E-28 136.7 8.5 118 2-133 222-344 (368)
102 3lvq_E ARF-GAP with SH3 domain 99.9 9.4E-24 3.2E-28 141.2 8.8 107 14-134 133-248 (497)
103 1dcq_A PYK2-associated protein 99.9 1.5E-23 5.1E-28 131.2 8.6 108 13-134 130-246 (278)
104 3aaa_C Myotrophin, protein V-1 99.9 2.2E-23 7.5E-28 115.8 4.8 92 2-107 29-120 (123)
105 3deo_A Signal recognition part 99.9 2E-22 6.8E-27 119.0 8.6 87 3-103 66-153 (183)
106 3c5r_A BARD-1, BRCA1-associate 99.9 8.9E-24 3E-28 119.4 2.6 101 2-116 32-132 (137)
107 2zgd_A 3 repeat synthetic anky 99.9 1.4E-22 5E-27 110.6 7.0 93 6-112 17-109 (110)
108 3ui2_A Signal recognition part 99.9 1.2E-22 4.3E-27 124.9 7.1 102 3-118 67-185 (244)
109 1sw6_A Regulatory protein SWI6 99.9 4.2E-23 1.4E-27 131.7 0.9 102 19-134 103-209 (327)
110 2aja_A Ankyrin repeat family p 99.8 5.4E-23 1.8E-27 133.2 -0.7 114 9-134 88-206 (376)
111 1n0q_A 3ANK, 3 ankyrin repeats 99.8 4.7E-21 1.6E-25 101.5 4.1 76 45-134 1-76 (93)
112 2aja_A Ankyrin repeat family p 99.8 4.2E-22 1.5E-26 129.0 -2.6 105 9-135 124-234 (376)
113 2zgd_A 3 repeat synthetic anky 99.8 2.7E-19 9.3E-24 97.5 3.5 82 39-134 17-98 (110)
114 2l6b_A NR1C; ankyrin, consensu 99.8 3.2E-18 1.1E-22 93.8 6.7 81 41-135 4-84 (115)
115 1gp8_A Protein (scaffolding pr 67.5 5.9 0.0002 16.6 2.2 17 17-33 17-33 (40)
116 3r3t_A 30S ribosomal protein S 23.4 83 0.0028 16.1 2.6 26 108-133 29-54 (99)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=5.1e-35 Score=171.06 Aligned_cols=119 Identities=34% Similarity=0.494 Sum_probs=110.2
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|+|+|.+|.+|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..|+.+++++++ +.+..
T Consensus 26 ~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll-------~~gad--- 95 (169)
T 4gpm_A 26 NGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLI-------SKGAD--- 95 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH-------HTTCC---
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHH-------HCcCC---
Confidence 69999999999999999999999999999999999999999999999999999999866655554 34444
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++.++..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+
T Consensus 96 ----vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~ 144 (169)
T 4gpm_A 96 ----VNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAR 144 (169)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 7888999999999999999999999999999999999999999999986
No 2
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.98 E-value=3.5e-32 Score=154.15 Aligned_cols=118 Identities=24% Similarity=0.275 Sum_probs=104.8
Q ss_pred CCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhh
Q psy8766 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGI 82 (135)
Q Consensus 3 g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (135)
|+|+ .+|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++.. .+..
T Consensus 1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-------~g~~---- 68 (137)
T 3c5r_A 1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQ-------HKAL---- 68 (137)
T ss_dssp ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHH-------TTCC----
T ss_pred CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCc----
Confidence 7888 789999999999999999999999999999999999999999999999998766665554 3333
Q ss_pred hhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhccC
Q psy8766 83 QNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 83 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~~ 135 (135)
++..+..|+||||+|+..++.+++++|+++|++++.+|..|.||+++|++
T Consensus 69 ---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~ 118 (137)
T 3c5r_A 69 ---VNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDD 118 (137)
T ss_dssp ---TTCCCGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCC
T ss_pred ---ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhh
Confidence 67788899999999999999999999999999999999999999999874
No 3
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.97 E-value=2.4e-32 Score=154.67 Aligned_cols=117 Identities=25% Similarity=0.313 Sum_probs=107.3
Q ss_pred CCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhh
Q psy8766 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGI 82 (135)
Q Consensus 3 g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (135)
+.++|.++..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+. ++.++++++... +..
T Consensus 2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-------g~~---- 69 (136)
T 1d9s_A 2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLH-------GAE---- 69 (136)
T ss_dssp CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHH-------TCC----
T ss_pred CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHC-------CCC----
Confidence 67999999999999999999999999999999999999999999999999999 987776666653 333
Q ss_pred hhhhhccCCC-CCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 83 QNLLNEKDKT-GCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 83 ~~~~~~~~~~-~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+.. |+||||+|+..++.+++++|+++|++++.+|..|.|||++|+
T Consensus 70 ---~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 119 (136)
T 1d9s_A 70 ---PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAE 119 (136)
T ss_dssp ---SSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHH
T ss_pred ---CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 6778888 999999999999999999999999999999999999999986
No 4
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=3.3e-31 Score=165.10 Aligned_cols=127 Identities=25% Similarity=0.368 Sum_probs=94.1
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHH-------------
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEV------------- 68 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~------------- 68 (135)
+|+|+|.+|.+|.||||+|+..|+.+++++|++.|++++.++..|.||+++|+..++.++++++...
T Consensus 75 ~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~T 154 (269)
T 4b93_B 75 SGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNT 154 (269)
T ss_dssp CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCC
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCC
Confidence 5888888888888888888888888888887777666655555555555555555544444443321
Q ss_pred -------------HHHHhcCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhccC
Q psy8766 69 -------------AAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 69 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~~ 135 (135)
...+++.+.. ++..+..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|++
T Consensus 155 pL~~A~~~g~~~~v~~Ll~~gad-------vn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 227 (269)
T 4b93_B 155 PLIYACSGGHHELVALLLQHGAS-------INASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQ 227 (269)
T ss_dssp HHHHHHHTTCGGGHHHHHHTTCC-------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCT
T ss_pred HHHHHHHCCCHHHHHHHHHCCCC-------CCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHh
Confidence 1111122222 67788899999999999999999999999999999999999999999974
No 5
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=5.5e-31 Score=168.09 Aligned_cols=134 Identities=26% Similarity=0.297 Sum_probs=108.0
Q ss_pred CCCCccc-cccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCC---CchHHHHHHHH-HHHhcC-
Q psy8766 2 TGADLNV-LDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGG---GHIKEFAEEVA-AVFLGE- 75 (135)
Q Consensus 2 ~g~~~n~-~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~---~~~~~~~~~~~-~~~~~~- 75 (135)
+|+|+|. +|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ .+.+..+.... ......
T Consensus 119 ~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d 198 (327)
T 1sw6_A 119 TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILED 198 (327)
T ss_dssp SCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEEC
T ss_pred cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCC
Confidence 5899999 89999999999999999999999999999999999999999999999887 44444444332 100000
Q ss_pred --Cc--------------chhhh---------------------------------------------------hhhhhc
Q psy8766 76 --GE--------------ASQGI---------------------------------------------------QNLLNE 88 (135)
Q Consensus 76 --~~--------------~~~~~---------------------------------------------------~~~~~~ 88 (135)
+. ....+ ...++.
T Consensus 199 ~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~ 278 (327)
T 1sw6_A 199 SMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNA 278 (327)
T ss_dssp TTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTC
T ss_pred CCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCC
Confidence 00 00000 002667
Q ss_pred cCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhccC
Q psy8766 89 KDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 89 ~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~~ 135 (135)
.+..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|++
T Consensus 279 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 279 QDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHh
Confidence 88899999999999999999999999999999999999999999985
No 6
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=167.25 Aligned_cols=123 Identities=24% Similarity=0.318 Sum_probs=80.1
Q ss_pred CccccccCCChHHHHHHHhCCHH-HHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHH-------------
Q psy8766 5 DLNVLDKEKRSPLLLAASRGGWK-TVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAA------------- 70 (135)
Q Consensus 5 ~~n~~~~~g~tpl~~a~~~~~~~-~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~------------- 70 (135)
.++..+..|.|||+.|+..+..+ ++++|++.|++++.+|..|.||||+|+..|+.+++++++....
T Consensus 44 ~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l 123 (269)
T 4b93_B 44 TVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPL 123 (269)
T ss_dssp -------------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred cccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCcc
Confidence 46778889999999999887764 7899999999999999999999999999999999988876321
Q ss_pred -------------HHhcCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 71 -------------VFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 71 -------------~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
.++..+.. ++..+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus 124 ~~a~~~~~~~~~~~Ll~~g~~-------~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~ 193 (269)
T 4b93_B 124 HLACQQGHFQVVKCLLDSNAK-------PNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAV 193 (269)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC-------SCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred ccccccChHHHHHHHHHCCCC-------CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHH
Confidence 12222222 5667889999999999999999999999999999999999999999986
No 7
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=5.9e-31 Score=153.85 Aligned_cols=119 Identities=31% Similarity=0.408 Sum_probs=109.0
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|+++|.+|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++.. .+..
T Consensus 36 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-------~g~~--- 105 (169)
T 2y1l_E 36 NGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLK-------NGAD--- 105 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-------TTCC---
T ss_pred CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC---
Confidence 589999999999999999999999999999999999999999999999999999998766665554 3333
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+
T Consensus 106 ----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 154 (169)
T 2y1l_E 106 ----VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISI 154 (169)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 6778889999999999999999999999999999999999999999986
No 8
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=1.5e-30 Score=153.42 Aligned_cols=119 Identities=29% Similarity=0.312 Sum_probs=108.8
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
.+.++|.++..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++.. .+..
T Consensus 28 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~--- 97 (179)
T 3f6q_A 28 TENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQ-------YKAD--- 97 (179)
T ss_dssp TTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH-------TTCC---
T ss_pred CcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC---
Confidence 367899999999999999999999999999999999999999999999999999998666665554 3433
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+
T Consensus 98 ----~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~ 146 (179)
T 3f6q_A 98 ----INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAK 146 (179)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSC
T ss_pred ----CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHH
Confidence 6788899999999999999999999999999999999999999999986
No 9
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=1.6e-30 Score=151.64 Aligned_cols=119 Identities=29% Similarity=0.360 Sum_probs=109.2
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
.|.++|.+|..|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.++++++... +..
T Consensus 25 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~--- 94 (167)
T 3v31_A 25 QENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDC-------GVD--- 94 (167)
T ss_dssp HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHH-------TCC---
T ss_pred cCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHC-------CCC---
Confidence 4788999999999999999999999999999999999999999999999999999987777666654 333
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|.||||+|+..++.+++++|+++|++++.++..|.||+++|+
T Consensus 95 ----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 143 (167)
T 3v31_A 95 ----VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAV 143 (167)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ----CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 6778899999999999999999999999999999999999999999986
No 10
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=3.3e-30 Score=150.06 Aligned_cols=120 Identities=24% Similarity=0.272 Sum_probs=107.9
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
.+.+++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++.. .+..
T Consensus 31 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~--- 100 (165)
T 3twr_A 31 QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVK-------HGAV--- 100 (165)
T ss_dssp TTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-------TTCC---
T ss_pred CCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHh-------CCCC---
Confidence 356778888899999999999999999999999999999999999999999999998766665554 3433
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhccC
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~~ 135 (135)
++..+..|+||||+|+..++.+++++|+++|++++.+|..|.||+++|.+
T Consensus 101 ----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 101 ----VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp ----TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT
T ss_pred ----CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc
Confidence 67788999999999999999999999999999999999999999999864
No 11
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.97 E-value=2.2e-30 Score=151.40 Aligned_cols=106 Identities=29% Similarity=0.404 Sum_probs=91.7
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|+|++.+|.+|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.++++++.. .+..
T Consensus 59 ~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~-------~gad--- 128 (169)
T 4gpm_A 59 KGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLIS-------KGAD--- 128 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-------TTCC---
T ss_pred cccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC---
Confidence 689999999999999999999999999999999999999999999999999999998666655544 4444
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeee
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINL 121 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~ 121 (135)
++..+..|+|||++|+..|+.+++++|+++|++++-
T Consensus 129 ----~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 129 ----VNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred ----ccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence 778899999999999999999999999999999864
No 12
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=1.9e-29 Score=147.71 Aligned_cols=118 Identities=28% Similarity=0.351 Sum_probs=106.4
Q ss_pred CCC-ccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 3 GAD-LNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 3 g~~-~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
|.+ ++.++..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++. ..+..
T Consensus 25 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-------~~g~~--- 94 (172)
T 3v30_A 25 GDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLL-------ERDVD--- 94 (172)
T ss_dssp CSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-------TTTCC---
T ss_pred CcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHH-------HcCCC---
Confidence 444 7889999999999999999999999999999999999999999999999999866555544 44444
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|+||||+|+..++.+++++|+++|++++.+|..|.|||++|+
T Consensus 95 ----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 143 (172)
T 3v30_A 95 ----INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAV 143 (172)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 6778899999999999999999999999999999999999999999986
No 13
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=3.1e-30 Score=153.51 Aligned_cols=118 Identities=23% Similarity=0.274 Sum_probs=96.0
Q ss_pred CCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhh
Q psy8766 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGI 82 (135)
Q Consensus 3 g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (135)
|++++.++..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.++++++.. .+..
T Consensus 58 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~---- 126 (192)
T 2rfm_A 58 FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLE-------HGAN---- 126 (192)
T ss_dssp HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-------TTCC----
T ss_pred ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHH-------CCCC----
Confidence 56777778888888888888888888888888888888888888888888888887555554443 3333
Q ss_pred hhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 83 QNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 83 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+
T Consensus 127 ---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 175 (192)
T 2rfm_A 127 ---VNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASAR 175 (192)
T ss_dssp ---SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred ---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 6777888999999999999999999999999999999999999999886
No 14
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.8e-30 Score=150.63 Aligned_cols=118 Identities=25% Similarity=0.262 Sum_probs=107.3
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|+++|.++..|.||||+|+. ++.+++++|++.|++++.++..|.||||+|+..++.++++++.. .+..
T Consensus 27 ~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~--- 95 (162)
T 1ihb_A 27 NNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLE-------FQAD--- 95 (162)
T ss_dssp SCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-------TTCC---
T ss_pred CCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC---
Confidence 689999999999999999999 99999999999999999999999999999999998766666554 3333
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCC-eeecCCCCCCcchhcc
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGAC-INLKNNSNESPLHLAA 134 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~-~~~~~~~g~tpl~~a~ 134 (135)
++..+..|+||||+|+..++.+++++|+++|++ ++.++..|.|||++|+
T Consensus 96 ----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~ 145 (162)
T 1ihb_A 96 ----VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLAR 145 (162)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHH
T ss_pred ----CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHH
Confidence 677889999999999999999999999999998 5999999999999986
No 15
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=2.8e-29 Score=144.56 Aligned_cols=118 Identities=27% Similarity=0.341 Sum_probs=105.5
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|.+++ .+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++. ..+..
T Consensus 24 ~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-------~~g~~--- 92 (153)
T 1awc_B 24 NGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLL-------KHGAD--- 92 (153)
T ss_dssp HTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHH-------TTTCC---
T ss_pred cCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHH-------HcCCC---
Confidence 366776 5788999999999999999999999999999999999999999999999865555444 44444
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|+||||+|+..++.+++++|+++|++++.+|..|.||+++|+
T Consensus 93 ----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 141 (153)
T 1awc_B 93 ----VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISI 141 (153)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred ----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHH
Confidence 6788899999999999999999999999999999999999999999986
No 16
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.96 E-value=5.4e-29 Score=156.77 Aligned_cols=66 Identities=29% Similarity=0.199 Sum_probs=60.2
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHH
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEE 67 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~ 67 (135)
+|+++|..|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.++++++..
T Consensus 62 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~ 127 (299)
T 1s70_B 62 RGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLIS 127 (299)
T ss_dssp HCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHh
Confidence 478999999999999999999999999999999999999999999999999999999888888765
No 17
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.96 E-value=7.2e-29 Score=138.12 Aligned_cols=112 Identities=22% Similarity=0.229 Sum_probs=98.8
Q ss_pred ccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhcc
Q psy8766 10 DKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEK 89 (135)
Q Consensus 10 ~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (135)
+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++. ..+.. ++..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-------~~g~~-------~~~~ 69 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLL-------LKGAD-------INAP 69 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHH-------TTTCC-------TTCC
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHH-------HcCCC-------CCcC
Confidence 567899999999999999999999999999999999999999999999865554444 44444 7788
Q ss_pred CCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhccC
Q psy8766 90 DKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 90 ~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~~ 135 (135)
+..|+||||+|+..++.+++++|+++|++++.+|..|.||+++|..
T Consensus 70 d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 115 (123)
T 3aaa_C 70 DKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDN 115 (123)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCC
Confidence 8999999999999999999999999999999999999999999863
No 18
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.96 E-value=1.2e-29 Score=154.74 Aligned_cols=133 Identities=17% Similarity=0.168 Sum_probs=106.6
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCc-----cccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCC
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANI-----LLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEG 76 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~-----~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~ 76 (135)
.|+++|.+|..|.||||+|+..|+.+++++|++.|+++ +.++..|.||||+|+..++.++++++...........
T Consensus 26 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 105 (232)
T 2rfa_A 26 EGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARA 105 (232)
T ss_dssp TCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCccc
Confidence 38999999999999999999999999999999999887 6678899999999999998777776665432211100
Q ss_pred cchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhccC
Q psy8766 77 EASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~~ 135 (135)
. ........+..+..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|++
T Consensus 106 ~-~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~ 163 (232)
T 2rfa_A 106 T-GSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILIL 163 (232)
T ss_dssp C-SGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHT
T ss_pred C-CcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Confidence 0 000000122334579999999999999999999999999999999999999999874
No 19
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.96 E-value=3.7e-29 Score=152.14 Aligned_cols=118 Identities=29% Similarity=0.314 Sum_probs=98.6
Q ss_pred CCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCC-cchhhh
Q psy8766 4 ADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEG-EASQGI 82 (135)
Q Consensus 4 ~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 82 (135)
.+++.++..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.++++++. ..+ ..
T Consensus 98 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-------~~g~~~---- 166 (228)
T 2dzn_A 98 PDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC-------GLGKSA---- 166 (228)
T ss_dssp CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHH-------TTTCCC----
T ss_pred cccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHH-------hcCccc----
Confidence 777888888888888888888888888888888888888888888888888888755444443 333 33
Q ss_pred hhhhhccCCCCCcHHHHHHhcCcHHHHHHHH-HcCCCeeecCCCCCCcchhccC
Q psy8766 83 QNLLNEKDKTGCSPLHYASREGHIISLENLI-NLGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 83 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll-~~g~~~~~~~~~g~tpl~~a~~ 135 (135)
++..+..|+||||+|+..++.+++++|+ +.|++++.+|..|.||+++|++
T Consensus 167 ---~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 167 ---VNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp ---SCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred ---ccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence 6778889999999999999999999999 8899999999999999999864
No 20
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.96 E-value=1e-28 Score=158.15 Aligned_cols=133 Identities=26% Similarity=0.220 Sum_probs=96.2
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhc-------
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLG------- 74 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~------- 74 (135)
+|+++|.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..++.++++++.........
T Consensus 80 ~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~ 159 (351)
T 3utm_A 80 HGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKS 159 (351)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCc
Confidence 4777888888888888888888888888888888888888888888888888888877777766542110000
Q ss_pred --------------------------------------------------CC-------------cchhhhhh------h
Q psy8766 75 --------------------------------------------------EG-------------EASQGIQN------L 85 (135)
Q Consensus 75 --------------------------------------------------~~-------------~~~~~~~~------~ 85 (135)
.+ .....+.. .
T Consensus 160 ~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~ 239 (351)
T 3utm_A 160 AVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGAN 239 (351)
T ss_dssp HHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCC
T ss_pred chHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCC
Confidence 00 00000000 1
Q ss_pred hhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 86 LNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 86 ~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|+||||+|+..++.+++++|+++|++++.+|..|+|||++|+
T Consensus 240 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~ 288 (351)
T 3utm_A 240 VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAA 288 (351)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred cCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 3556778889999999999999999999999999999999999999886
No 21
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.96 E-value=9.3e-29 Score=151.24 Aligned_cols=133 Identities=20% Similarity=0.157 Sum_probs=94.1
Q ss_pred CCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHH------HhcC-
Q psy8766 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAV------FLGE- 75 (135)
Q Consensus 3 g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~------~~~~- 75 (135)
|+++|.++..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++...... ....
T Consensus 35 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 114 (236)
T 1ikn_D 35 LAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATN 114 (236)
T ss_dssp CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCC
T ss_pred HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccC
Confidence 456777777777888888877777788777777777777777777777777777776666666543211 0000
Q ss_pred --Cc----------chhhhhh------hhhccCC-CCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhccC
Q psy8766 76 --GE----------ASQGIQN------LLNEKDK-TGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 76 --~~----------~~~~~~~------~~~~~~~-~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~~ 135 (135)
+. ....+.. .++..+. .|+||||+|+..++.+++++|+++|++++.+|..|.|||++|++
T Consensus 115 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~ 193 (236)
T 1ikn_D 115 YNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWG 193 (236)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHHHc
Confidence 00 0000000 1455565 88999999999999999999999999999999999999998864
No 22
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=4.4e-29 Score=152.11 Aligned_cols=126 Identities=28% Similarity=0.322 Sum_probs=94.8
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHH------------
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVA------------ 69 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~------------ 69 (135)
+|++++.+|..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.++++++....
T Consensus 62 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t 141 (231)
T 3aji_A 62 LGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDAT 141 (231)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred hCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCc
Confidence 46777777777888888888888888888888888877777777788888887777766666665421
Q ss_pred --------------HHHhcCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 70 --------------AVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 70 --------------~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
..++..+.. ++..+..|+||||+|+..++.+++++|+++|++++.+|..|.||+++|+
T Consensus 142 ~L~~A~~~~~~~~v~~Ll~~g~~-------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 213 (231)
T 3aji_A 142 AMHRAAAKGNLKMVHILLFYKAS-------TNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAK 213 (231)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC-------SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSC
T ss_pred HHHHHHHcCCHHHHHHHHhcCCC-------ccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 111111111 4566778889999999999999999999999999988889999998875
No 23
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.96 E-value=1.1e-28 Score=153.09 Aligned_cols=132 Identities=21% Similarity=0.255 Sum_probs=92.3
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHH-------------
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEV------------- 68 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~------------- 68 (135)
+|+++|.+|.+|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++.+.
T Consensus 25 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~ 104 (261)
T 2xai_A 25 QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASP 104 (261)
T ss_dssp TTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTCCH
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCH
Confidence 5788888888899999999999999999999999999988888899999999888887777776552
Q ss_pred ------------HHHHhcCCcchhh--------------------hhhh------hhccCCCCCcHHHHHHhcCcHHHHH
Q psy8766 69 ------------AAVFLGEGEASQG--------------------IQNL------LNEKDKTGCSPLHYASREGHIISLE 110 (135)
Q Consensus 69 ------------~~~~~~~~~~~~~--------------------~~~~------~~~~~~~~~t~l~~a~~~~~~~~~~ 110 (135)
...+++.+..... +..+ ++ .+..|+||||+|+..++.++++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~~g~t~Lh~A~~~~~~~~v~ 183 (261)
T 2xai_A 105 IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVARTASEELAC 183 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTT-CCBTTBCHHHHHHHHTCHHHHH
T ss_pred HHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCC-CCCCCCChHHHHHHcCCHHHHH
Confidence 1112222111000 0000 11 2455667777777777777777
Q ss_pred HHHHcCCCeeecCCCCCCcchhcc
Q psy8766 111 NLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 111 ~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
+|+++|++++.+|..|+||+++|+
T Consensus 184 ~Ll~~gad~~~~d~~g~tpl~~A~ 207 (261)
T 2xai_A 184 LLMDFGADTQAKNAEGKRPVELVP 207 (261)
T ss_dssp HHHHTTCCTTCCCTTSCCGGGGSC
T ss_pred HHHHcCCCCCCcCCCCCChhhhcc
Confidence 777777777777777777777765
No 24
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=1.6e-29 Score=150.47 Aligned_cols=115 Identities=30% Similarity=0.282 Sum_probs=105.4
Q ss_pred ccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhh
Q psy8766 6 LNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNL 85 (135)
Q Consensus 6 ~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (135)
+|.+|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++... +..
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-------g~~------- 93 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSK-------GSN------- 93 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH-------TCC-------
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHC-------CCC-------
Confidence 578899999999999999999999999999999999999999999999999987777666653 222
Q ss_pred hhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 86 LNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 86 ~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||||+|+
T Consensus 94 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 142 (192)
T 2rfm_A 94 VNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVAS 142 (192)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHH
T ss_pred CCCCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 6778889999999999999999999999999999999999999999986
No 25
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=1.9e-29 Score=145.54 Aligned_cols=116 Identities=22% Similarity=0.266 Sum_probs=105.2
Q ss_pred CCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhh
Q psy8766 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGI 82 (135)
Q Consensus 3 g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (135)
+.+++..+..|.||||+ +..|+.+++++|++.|++++.+|..|.||||+|+..++.++++++.. .+..
T Consensus 26 ~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~---- 93 (156)
T 1bd8_A 26 LVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVE-------HGAD---- 93 (156)
T ss_dssp CCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-------TTCC----
T ss_pred CcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHH-------cCCC----
Confidence 56899999999999999 99999999999999999999999999999999999998666655554 3333
Q ss_pred hhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 83 QNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 83 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|+||||+|+..++.+++++|++. ++++.+|..|.|||++|+
T Consensus 94 ---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~ 141 (156)
T 1bd8_A 94 ---VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELAL 141 (156)
T ss_dssp ---SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHH
T ss_pred ---CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHH
Confidence 677888999999999999999999999999 999999999999999986
No 26
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=7.7e-29 Score=153.11 Aligned_cols=57 Identities=21% Similarity=0.178 Sum_probs=30.6
Q ss_pred ccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHH
Q psy8766 10 DKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAE 66 (135)
Q Consensus 10 ~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~ 66 (135)
|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++.
T Consensus 54 d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 110 (253)
T 1yyh_A 54 DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILI 110 (253)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 455555555555555555555555555555555555555555555555544444443
No 27
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=6e-29 Score=148.69 Aligned_cols=132 Identities=18% Similarity=0.191 Sum_probs=98.4
Q ss_pred CCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcC----C--
Q psy8766 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGE----G-- 76 (135)
Q Consensus 3 g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~----~-- 76 (135)
+.++|.+|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++.......... +
T Consensus 29 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t 108 (201)
T 3hra_A 29 TYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGN 108 (201)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCC
T ss_pred CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCc
Confidence 4589999999999999999999999999999999999999999999999999999888877776421100000 0
Q ss_pred --------cchhhhh-------hhhhccCCCCCcHHHHHHhcCc-----HHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 77 --------EASQGIQ-------NLLNEKDKTGCSPLHYASREGH-----IISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 77 --------~~~~~~~-------~~~~~~~~~~~t~l~~a~~~~~-----~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
.....+. ..++..+..|+||||+|+..+. .+++++|+++|++++.+|..|.|||++|+
T Consensus 109 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 186 (201)
T 3hra_A 109 ALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYAN 186 (201)
T ss_dssp SHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHHHH
Confidence 0000000 0144566677888888887776 78888888888888888888888888775
No 28
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.96 E-value=2.3e-29 Score=142.41 Aligned_cols=111 Identities=28% Similarity=0.316 Sum_probs=99.8
Q ss_pred ccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhcc
Q psy8766 10 DKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEK 89 (135)
Q Consensus 10 ~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (135)
...|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.++++++.. .+.. ++..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~-------~~~~ 76 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLK-------NGAD-------VNAV 76 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-------TTCC-------TTCC
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC-------CCcC
Confidence 4567899999999999999999999999999999999999999999998666655554 3333 6778
Q ss_pred CCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 90 DKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 90 ~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
+..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+
T Consensus 77 d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~ 121 (136)
T 2jab_A 77 DAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISI 121 (136)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHH
Confidence 889999999999999999999999999999999999999999986
No 29
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.96 E-value=3.5e-28 Score=147.45 Aligned_cols=126 Identities=27% Similarity=0.313 Sum_probs=88.0
Q ss_pred CCCCcccc-ccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHH----------
Q psy8766 2 TGADLNVL-DKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAA---------- 70 (135)
Q Consensus 2 ~g~~~n~~-~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~---------- 70 (135)
+|++++.. |..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++.....
T Consensus 13 ~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g 92 (223)
T 2f8y_A 13 QGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDG 92 (223)
T ss_dssp TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTC
T ss_pred cCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence 46777655 6788888888888888888888888888888888888888888888887777766654221
Q ss_pred -----------------HHhcCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhc
Q psy8766 71 -----------------VFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLA 133 (135)
Q Consensus 71 -----------------~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a 133 (135)
.++..+.. ++..+..|.||||+|+..++.+++++|+++|++++.++..|.|||++|
T Consensus 93 ~t~L~~A~~~~~~~~~~~Ll~~g~~-------~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 165 (223)
T 2f8y_A 93 TTPLILAARLAVEGMLEDLINSHAD-------VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLA 165 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCC-------TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CcHHHHHHHhCcHHHHHHHHHcCCC-------CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHH
Confidence 11111111 344555667777777777777777777777777777777777777766
Q ss_pred c
Q psy8766 134 A 134 (135)
Q Consensus 134 ~ 134 (135)
+
T Consensus 166 ~ 166 (223)
T 2f8y_A 166 A 166 (223)
T ss_dssp H
T ss_pred H
Confidence 4
No 30
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.96 E-value=9.2e-29 Score=150.70 Aligned_cols=131 Identities=21% Similarity=0.204 Sum_probs=101.3
Q ss_pred CCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCc------
Q psy8766 4 ADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGE------ 77 (135)
Q Consensus 4 ~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~------ 77 (135)
..++.++..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++............
T Consensus 31 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 110 (231)
T 3aji_A 31 SLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPL 110 (231)
T ss_dssp GGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred hhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHH
Confidence 34678899999999999999999999999999999999999999999999999998888877653221110000
Q ss_pred -------chhhhhh------hhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 78 -------ASQGIQN------LLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 78 -------~~~~~~~------~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
....+.. .++..+..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+
T Consensus 111 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 180 (231)
T 3aji_A 111 HYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLAC 180 (231)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHH
Confidence 0000000 13456667888888888888888888888888888888888888888875
No 31
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=5.8e-29 Score=155.31 Aligned_cols=118 Identities=20% Similarity=0.142 Sum_probs=96.4
Q ss_pred CCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccC-CchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDIN-RRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 3 g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+++++.++..|.||||+|+..|+.+++++|++.|++++.++.. |.||||+|+..++.+++++++. .+..
T Consensus 148 ~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~-------~gad--- 217 (282)
T 1oy3_D 148 RLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLK-------AGAD--- 217 (282)
T ss_dssp GGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH-------TTCC---
T ss_pred hhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHH-------cCCC---
Confidence 5678999999999999999999999999999999999999854 9999999999998666555554 3444
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++.++..|+||||+|+..++.+++++|+++|++++.++..|.||+++|.
T Consensus 218 ----~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~ 266 (282)
T 1oy3_D 218 ----PTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSG 266 (282)
T ss_dssp ----TTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC-----------
T ss_pred ----CcccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccC
Confidence 7888999999999999999999999999999999999999999999885
No 32
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.96 E-value=5.5e-29 Score=153.78 Aligned_cols=126 Identities=23% Similarity=0.250 Sum_probs=88.7
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCC-CccccccCCchHHHHHHHhCCCchHHHHHHHH-----------
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKA-NILLKDINRRNILHLLVLNGGGHIKEFAEEVA----------- 69 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~----------- 69 (135)
+|++++.++..|.||||+|+..++.+++++|++.+. +++.++..|.||||+|+..++.++++++....
T Consensus 79 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~ 158 (253)
T 1yyh_A 79 ASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGK 158 (253)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSC
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCC
Confidence 467777777777888888888888888888777765 77777777777777777777777766665521
Q ss_pred ---------------HHHhcCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 70 ---------------AVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 70 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
..+++.+.. ++..+..|+||||+|+..++.+++++|+++|++++.+|..|.||+++|+
T Consensus 159 t~L~~A~~~~~~~~v~~Ll~~ga~-------~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 231 (253)
T 1yyh_A 159 SALHWAAAVNNVDAAVVLLKNGAN-------KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQ 231 (253)
T ss_dssp BHHHHHHHHTCHHHHHHHHHTTCC-------TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC-------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHHHHH
Confidence 111122222 4556667777777777777777777777777777777777777777765
No 33
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.96 E-value=1.1e-28 Score=154.04 Aligned_cols=130 Identities=25% Similarity=0.248 Sum_probs=97.8
Q ss_pred ccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHH--------------
Q psy8766 6 LNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAV-------------- 71 (135)
Q Consensus 6 ~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~-------------- 71 (135)
+|.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.++++++......
T Consensus 38 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 117 (282)
T 1oy3_D 38 LDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQ 117 (282)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhccc
Confidence 788899999999999999999999999999999999999999999999999988877776531100
Q ss_pred -------------------------H-------hc----CCc----------chhhhhhh------hhccCC-CCCcHHH
Q psy8766 72 -------------------------F-------LG----EGE----------ASQGIQNL------LNEKDK-TGCSPLH 98 (135)
Q Consensus 72 -------------------------~-------~~----~~~----------~~~~~~~~------~~~~~~-~~~t~l~ 98 (135)
. +. .+. ....+..+ ++..+. .|+||||
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~ 197 (282)
T 1oy3_D 118 DCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLH 197 (282)
T ss_dssp --------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHH
T ss_pred ccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHH
Confidence 0 00 000 00001111 233443 4888888
Q ss_pred HHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhccC
Q psy8766 99 YASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 99 ~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~~ 135 (135)
+|+..++.+++++|+++|++++.+|..|.|||++|++
T Consensus 198 ~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~ 234 (282)
T 1oy3_D 198 LAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALL 234 (282)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHH
Confidence 8888888888888888888888888888888888863
No 34
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=1.6e-27 Score=145.67 Aligned_cols=118 Identities=26% Similarity=0.356 Sum_probs=77.2
Q ss_pred CCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhh
Q psy8766 4 ADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQ 83 (135)
Q Consensus 4 ~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (135)
.+++.++..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.++++ .++..+..
T Consensus 102 ~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~-------~Ll~~g~~----- 169 (237)
T 3b7b_A 102 MDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAE-------ILLAAKCD----- 169 (237)
T ss_dssp CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHH-------HHHTTTCC-----
T ss_pred CCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHH-------HHHHcCCC-----
Confidence 344444445555555555555555555555555555555555555555555554433222 22233333
Q ss_pred hhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhccC
Q psy8766 84 NLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 84 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~~ 135 (135)
++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|++
T Consensus 170 --~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 219 (237)
T 3b7b_A 170 --LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASL 219 (237)
T ss_dssp --TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHSCT
T ss_pred --CCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHHHHHH
Confidence 56678889999999999999999999999999999999999999999874
No 35
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.95 E-value=5.1e-29 Score=152.42 Aligned_cols=127 Identities=24% Similarity=0.288 Sum_probs=94.6
Q ss_pred cccccCCChHHHHHHHhCCHHHHHHHHHcCC----CccccccCCchHHHHHHHhCCCchHHHHHHH--------------
Q psy8766 7 NVLDKEKRSPLLLAASRGGWKTVLTLVRNKA----NILLKDINRRNILHLLVLNGGGHIKEFAEEV-------------- 68 (135)
Q Consensus 7 n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~----~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~-------------- 68 (135)
+.+|.+|.||||+|+..|+.+++++|++.+. +++.++..|.||||+|+..++.+++++++..
T Consensus 2 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~ 81 (236)
T 1ikn_D 2 QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTP 81 (236)
T ss_dssp -----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCH
T ss_pred CcCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCH
Confidence 4578899999999999999999999998754 7899999999999999999987776665431
Q ss_pred ------------HHHHhcCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCC-CCCCcchhcc
Q psy8766 69 ------------AAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNN-SNESPLHLAA 134 (135)
Q Consensus 69 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~-~g~tpl~~a~ 134 (135)
...++..+... .....++..+..|.||||+|+..++.+++++|+++|++++.++. .|.||||+|+
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~ 159 (236)
T 1ikn_D 82 LHLACEQGCLASVGVLTQSCTTP-HLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAV 159 (236)
T ss_dssp HHHHHHHTCHHHHHHHHHSTTTT-SSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHhcccch-hHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Confidence 11122111100 00011355677899999999999999999999999999999987 8999999986
No 36
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.95 E-value=2.2e-28 Score=146.27 Aligned_cols=108 Identities=19% Similarity=0.253 Sum_probs=71.3
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHH-HcCCCccccccCCchHHHHHHHhCCCchHHHHHHHH-----------
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLV-RNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVA----------- 69 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll-~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~----------- 69 (135)
+|++++.++..|.||||+|+..++.+++++|+ ..+.+++..+..|.||||+|+..++.++++++....
T Consensus 61 ~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g 140 (201)
T 3hra_A 61 RGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFG 140 (201)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTS
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCC
Confidence 35666666666666666666666666666666 345566666666666666666666655555554432
Q ss_pred ---------------------HHHhcCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcC
Q psy8766 70 ---------------------AVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLG 116 (135)
Q Consensus 70 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g 116 (135)
..+++.+.. ++..+..|+|||++|+..++.+++++|+++|
T Consensus 141 ~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~-------~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 141 YTALIEAVGLREGNQLYQDIVKLLMENGAD-------QSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp CCHHHHHHHSSCCSHHHHHHHHHHHHTTCC-------TTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred CCHHHHHHHhccchhhHHHHHHHHHHCCCC-------CCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 222222222 5678889999999999999999999999876
No 37
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=1.1e-27 Score=146.64 Aligned_cols=67 Identities=19% Similarity=0.163 Sum_probs=56.0
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHH
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEV 68 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~ 68 (135)
.|.++|.+|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++...
T Consensus 35 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~ 101 (241)
T 1k1a_A 35 GGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDS 101 (241)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 4778888888888888888888888888888888888888888888888888888887777776654
No 38
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=3.9e-29 Score=148.18 Aligned_cols=123 Identities=16% Similarity=0.147 Sum_probs=104.8
Q ss_pred Cccccc-cCCChHHHHHHHhCCH----HHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcch
Q psy8766 5 DLNVLD-KEKRSPLLLAASRGGW----KTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEAS 79 (135)
Q Consensus 5 ~~n~~~-~~g~tpl~~a~~~~~~----~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (135)
+++..+ ..|.||||+|+..++. +++++|++.|++++.+|..|+||||+|+..++..+.. ..++...++..+..
T Consensus 29 ~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~-~~~iv~~Ll~~Gad- 106 (186)
T 3t8k_A 29 GYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITG-TTELCKIFLEKGAD- 106 (186)
T ss_dssp SSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHH-HHHHHHHHHHTTCC-
T ss_pred CcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhh-HHHHHHHHHHCCCC-
Confidence 456666 7899999999999975 5899999999999999999999999999998655422 23456667777777
Q ss_pred hhhhhhhhccCCCCC-cHHHHHHhcC-----cHHHHHHHHH-cCCCeeecCCCCCCcchhccC
Q psy8766 80 QGIQNLLNEKDKTGC-SPLHYASREG-----HIISLENLIN-LGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 80 ~~~~~~~~~~~~~~~-t~l~~a~~~~-----~~~~~~~ll~-~g~~~~~~~~~g~tpl~~a~~ 135 (135)
++.++..|+ ||||+|+..+ ..+++++|++ +|++++.+|..|.|||++|++
T Consensus 107 ------in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~ 163 (186)
T 3t8k_A 107 ------ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR 163 (186)
T ss_dssp ------SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHT
T ss_pred ------CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHH
Confidence 888999999 9999999844 4679999999 999999999999999999874
No 39
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.95 E-value=3.8e-28 Score=148.69 Aligned_cols=117 Identities=28% Similarity=0.305 Sum_probs=79.2
Q ss_pred CccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccc-cCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhh
Q psy8766 5 DLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKD-INRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQ 83 (135)
Q Consensus 5 ~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (135)
+++..+..|.||||+|+..++.+++++|++.|++++..+ ..|.||||+|+..++.++++++.+ .+..
T Consensus 108 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~----- 175 (241)
T 1k1a_A 108 DLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQ-------HGAN----- 175 (241)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH-------TTCC-----
T ss_pred cccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHH-------cCCC-----
Confidence 455555555555555555555555555555555555555 455555555555554333333332 2222
Q ss_pred hhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhccC
Q psy8766 84 NLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 84 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~~ 135 (135)
++..+..|+||||+|+..++.+++++|+++|++++.+|..|.||+++|++
T Consensus 176 --~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~ 225 (241)
T 1k1a_A 176 --VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARS 225 (241)
T ss_dssp --TTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSS
T ss_pred --CCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHh
Confidence 56678889999999999999999999999999999999999999999864
No 40
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.95 E-value=3.7e-28 Score=147.45 Aligned_cols=115 Identities=23% Similarity=0.257 Sum_probs=102.4
Q ss_pred cccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcC-Ccchhhhhhh
Q psy8766 7 NVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGE-GEASQGIQNL 85 (135)
Q Consensus 7 n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 85 (135)
+..+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++ ++.. +..
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~-------Ll~~~g~~------- 132 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEM-------LFTQPNIE------- 132 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH-------HTTSTTCC-------
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHH-------HHcCCCCC-------
Confidence 3456678999999999999999999999999999999999999999999998554444 4444 444
Q ss_pred hhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhccC
Q psy8766 86 LNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 86 ~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~~ 135 (135)
++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|++
T Consensus 133 ~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~ 182 (222)
T 3ehr_A 133 LNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATN 182 (222)
T ss_dssp CCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCS
T ss_pred ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcc
Confidence 77889999999999999999999999999999999999999999999974
No 41
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=6.8e-28 Score=151.24 Aligned_cols=132 Identities=21% Similarity=0.248 Sum_probs=88.5
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHH-------------
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEV------------- 68 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~------------- 68 (135)
+|+++|.+|.+|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++...
T Consensus 81 ~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~ 160 (285)
T 3d9h_A 81 QGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASP 160 (285)
T ss_dssp TTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCH
T ss_pred CCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCH
Confidence 4778888888888888888888888888888888888888888888888888888877777766542
Q ss_pred ------------HHHHhcCCcchh--------------------hhhhh------hhccCCCCCcHHHHHHhcCcHHHHH
Q psy8766 69 ------------AAVFLGEGEASQ--------------------GIQNL------LNEKDKTGCSPLHYASREGHIISLE 110 (135)
Q Consensus 69 ------------~~~~~~~~~~~~--------------------~~~~~------~~~~~~~~~t~l~~a~~~~~~~~~~ 110 (135)
...++..+.... .+..+ ++ .+..|+||||+|+..++.++++
T Consensus 161 L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~-~~~~g~t~L~~A~~~~~~~~v~ 239 (285)
T 3d9h_A 161 IHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELAC 239 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTT-CCBTTBCHHHHHHHTTCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCC-CCCCCCCHHHHHHHcCCHHHHH
Confidence 111222111100 00000 11 2455667777777777777777
Q ss_pred HHHHcCCCeeecCCCCCCcchhcc
Q psy8766 111 NLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 111 ~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
+|+++|++++.+|..|.|||++|+
T Consensus 240 ~Ll~~gad~~~~d~~g~t~l~~A~ 263 (285)
T 3d9h_A 240 LLMDFGADTQAKNAEGKRPVELVP 263 (285)
T ss_dssp HHHHTTCCTTCCCTTSCCGGGGSC
T ss_pred HHHHCCCCCCCcCCCCCCHHHHhc
Confidence 777777777777777777777665
No 42
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=2.3e-28 Score=136.26 Aligned_cols=109 Identities=40% Similarity=0.586 Sum_probs=98.4
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhccCC
Q psy8766 12 EKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEKDK 91 (135)
Q Consensus 12 ~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (135)
+|.||||+|+..|+.+++++|++.|++++..+..|.||||+|+..++.++++++.. .+.. ++..+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-------~g~~-------~~~~~~ 66 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE-------AGAD-------VNAKDK 66 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-------TTCC-------TTCCCT
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHH-------cCCC-------CcccCC
Confidence 58999999999999999999999999999999999999999999998766665554 3333 677888
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 92 TGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 92 ~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
.|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+
T Consensus 67 ~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~ 109 (126)
T 1n0r_A 67 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAA 109 (126)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999986
No 43
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.95 E-value=5.3e-29 Score=147.27 Aligned_cols=110 Identities=25% Similarity=0.322 Sum_probs=99.0
Q ss_pred ccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhcc
Q psy8766 10 DKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEK 89 (135)
Q Consensus 10 ~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (135)
+..|.||||+|+..|+.++++.|++ |++++.+|..|.||||+|+..++.++++++.. .+.. ++..
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-------~ga~-------~~~~ 105 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAE-------AGAD-------LDHR 105 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-------TTCC-------TTCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC-------CCcC
Confidence 5688999999999999999999999 99999999999999999999998666655554 3433 6666
Q ss_pred C-CCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 90 D-KTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 90 ~-~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
+ ..|+||||+|+..++.+++++|+++|++++.+|..|.|||++|+
T Consensus 106 ~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 151 (183)
T 3deo_A 106 DMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAR 151 (183)
T ss_dssp CSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHH
Confidence 6 88999999999999999999999999999999999999999986
No 44
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=6.1e-29 Score=153.69 Aligned_cols=119 Identities=14% Similarity=0.111 Sum_probs=102.6
Q ss_pred CCCCccc----cccCCChHHHHHHHh---CCHHHHHHHHHcCCCcccc-----------ccCCchHHHHHHHhCCCchHH
Q psy8766 2 TGADLNV----LDKEKRSPLLLAASR---GGWKTVLTLVRNKANILLK-----------DINRRNILHLLVLNGGGHIKE 63 (135)
Q Consensus 2 ~g~~~n~----~~~~g~tpl~~a~~~---~~~~~~~~Ll~~g~~~~~~-----------~~~g~t~l~~a~~~~~~~~~~ 63 (135)
+|+++|. +|..|.||||+|+.. |+.+++++|++.|++++.. |..|.||||+|+..|+.++++
T Consensus 28 ~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~ 107 (256)
T 2etb_A 28 NSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVK 107 (256)
T ss_dssp HTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHH
T ss_pred cCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHH
Confidence 4789998 899999999999999 9999999999998877633 478999999999999877666
Q ss_pred HHHHHHHHHhcCCcchhhhhhhhhccCCC-------------CCcHHHHHHhcCcHHHHHHHHH---cCCCeeecCCCCC
Q psy8766 64 FAEEVAAVFLGEGEASQGIQNLLNEKDKT-------------GCSPLHYASREGHIISLENLIN---LGACINLKNNSNE 127 (135)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~t~l~~a~~~~~~~~~~~ll~---~g~~~~~~~~~g~ 127 (135)
++... +.. ++..+.. |.||||+|+..|+.+++++|++ .|++++.+|..|+
T Consensus 108 ~Ll~~-------ga~-------~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~ 173 (256)
T 2etb_A 108 LLVEN-------GAD-------VHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGN 173 (256)
T ss_dssp HHHHT-------TCC-------TTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSC
T ss_pred HHHHc-------CCC-------CCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCC
Confidence 66553 333 4444443 9999999999999999999999 9999999999999
Q ss_pred Ccchhcc
Q psy8766 128 SPLHLAA 134 (135)
Q Consensus 128 tpl~~a~ 134 (135)
||||+|+
T Consensus 174 TpLh~A~ 180 (256)
T 2etb_A 174 TVLHALV 180 (256)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 9999986
No 45
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.95 E-value=3.1e-28 Score=149.38 Aligned_cols=117 Identities=21% Similarity=0.241 Sum_probs=98.5
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|++++.. ..|.||||.|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++++.. +..
T Consensus 27 ~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga~--- 95 (239)
T 1ycs_B 27 HGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQF-------GVN--- 95 (239)
T ss_dssp -----------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHH-------TCC---
T ss_pred cCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCC---
Confidence 57888865 6889999999999999999999999999999999999999999999997777766653 333
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCC-Ccchhc
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNE-SPLHLA 133 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~-tpl~~a 133 (135)
++..+..|+||||+|+..++.+++++|+++|++++.++..|. ||+++|
T Consensus 96 ----~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 96 ----VNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp ----TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHC
T ss_pred ----CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHH
Confidence 788899999999999999999999999999999999998887 999998
No 46
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.95 E-value=1.4e-27 Score=145.92 Aligned_cols=133 Identities=24% Similarity=0.319 Sum_probs=76.5
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhc-C---C-
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLG-E---G- 76 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~-~---~- 76 (135)
+|++++..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++......... . +
T Consensus 33 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 112 (237)
T 3b7b_A 33 AGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGW 112 (237)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSC
T ss_pred cCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCC
Confidence 4566666666666666666666666666666666666666666666666666666665555544432100000 0 0
Q ss_pred ---------cchhhhhh------hhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 77 ---------EASQGIQN------LLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 77 ---------~~~~~~~~------~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
.....+.. .++..+..|.||||+|+..++.+++++|++.|++++.+|..|.|||++|+
T Consensus 113 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 185 (237)
T 3b7b_A 113 TPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAA 185 (237)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 00000000 02345556667777777777777777777777777777767777777664
No 47
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=4.6e-28 Score=159.52 Aligned_cols=119 Identities=26% Similarity=0.303 Sum_probs=82.4
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|+++|..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.++++++.+ .+..
T Consensus 267 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-------~gad--- 336 (437)
T 1n11_A 267 KQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQ-------HQAD--- 336 (437)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHH-------TTCC---
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHh-------cCCC---
Confidence 355555555555666666666666666666666666665556666666666666665554444433 2222
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++.++..|+||||+|+..|+.+++++|+++|++++.+|..|.||+++|.
T Consensus 337 ----~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~ 385 (437)
T 1n11_A 337 ----VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAK 385 (437)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHH
T ss_pred ----CCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence 5677888999999999999999999999999999999999999998875
No 48
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=6.6e-29 Score=143.47 Aligned_cols=110 Identities=26% Similarity=0.339 Sum_probs=53.4
Q ss_pred ccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhcc
Q psy8766 10 DKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEK 89 (135)
Q Consensus 10 ~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (135)
+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+ .++.+++++ ++..+.. ++..
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~-------Ll~~g~~-------~~~~ 73 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAEL-------LLLHGAE-------PNCA 73 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHH-------HHTTTCC-------CCCC
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHH-------HHHcCCC-------CCCc
Confidence 444555555555555555555555555555555555555555542 343222222 2222222 3444
Q ss_pred CCCCCc-HHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 90 DKTGCS-PLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 90 ~~~~~t-~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
+..|+| |||+|+..++.+++++|+++|++++.+|..|.|||++|+
T Consensus 74 d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 119 (156)
T 1bi7_B 74 DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAE 119 (156)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHH
T ss_pred CCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHH
Confidence 445554 555555555555555555555555555555555555543
No 49
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.95 E-value=2.2e-28 Score=160.99 Aligned_cols=119 Identities=25% Similarity=0.330 Sum_probs=88.7
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
.|+++|..+..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.++++++.... ..
T Consensus 3 ~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g-------~~--- 72 (437)
T 1n11_A 3 PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNK-------AK--- 72 (437)
T ss_dssp ------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHT-------CC---
T ss_pred CCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC-------CC---
Confidence 58899999999999999999999999999999999999999999999999999999877777766532 22
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|+||||+|+..|+.+++++|+++|++++..+..|.|||++|+
T Consensus 73 ----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~ 121 (437)
T 1n11_A 73 ----VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAA 121 (437)
T ss_dssp ----SSCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHH
T ss_pred ----CCCCCCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHH
Confidence 5666777888888888888888888888888888888888888888775
No 50
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.95 E-value=6e-28 Score=146.41 Aligned_cols=116 Identities=20% Similarity=0.222 Sum_probs=75.3
Q ss_pred CccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhh
Q psy8766 5 DLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQN 84 (135)
Q Consensus 5 ~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (135)
+++.++..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.++++++. +.+..
T Consensus 84 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll-------~~g~~------ 150 (223)
T 2f8y_A 84 DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLL-------KNGAN------ 150 (223)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH-------HTTCC------
T ss_pred CcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHH-------HcCCC------
Confidence 34444444444444444444444444444444444444444444444444444433322222 22222
Q ss_pred hhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 85 LLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 85 ~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|.||||+|+..++.+++++|+++|++++.+|..|.||+++|+
T Consensus 151 -~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 199 (223)
T 2f8y_A 151 -KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQ 199 (223)
T ss_dssp -TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred -CCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHH
Confidence 5677889999999999999999999999999999999999999999986
No 51
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=146.19 Aligned_cols=118 Identities=19% Similarity=0.201 Sum_probs=100.6
Q ss_pred CCCCccccc---cCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcc
Q psy8766 2 TGADLNVLD---KEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEA 78 (135)
Q Consensus 2 ~g~~~n~~~---~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (135)
+|++++..+ ..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++++. .+..
T Consensus 7 ~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~-------~ga~ 79 (229)
T 2vge_A 7 KAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLIT-------AGAN 79 (229)
T ss_dssp ---CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-------TTCC
T ss_pred cCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-------CCCC
Confidence 566766544 456688999999999999999999999999999999999999999998666665554 3443
Q ss_pred hhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecC-CCCCCcchhc
Q psy8766 79 SQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKN-NSNESPLHLA 133 (135)
Q Consensus 79 ~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~-~~g~tpl~~a 133 (135)
++..+..|+||||+|+..|+.+++++|++.|++++.++ ..|+|||++|
T Consensus 80 -------~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A 128 (229)
T 2vge_A 80 -------VNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKC 128 (229)
T ss_dssp -------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGC
T ss_pred -------CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHH
Confidence 77888899999999999999999999999999999986 6999999998
No 52
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=1.1e-28 Score=152.85 Aligned_cols=121 Identities=22% Similarity=0.190 Sum_probs=102.7
Q ss_pred CCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccc--------------cCCchHHHHHHHhCCCchHHHHHHHH
Q psy8766 4 ADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKD--------------INRRNILHLLVLNGGGHIKEFAEEVA 69 (135)
Q Consensus 4 ~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~--------------~~g~t~l~~a~~~~~~~~~~~~~~~~ 69 (135)
.+++..|..|.||||+|+..|+.+++++|++.|++++.++ ..|.||||+|+..|+.+++++++...
T Consensus 84 ~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~ 163 (260)
T 3jxi_A 84 SPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG 163 (260)
T ss_dssp CCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS
T ss_pred ccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 3455666799999999999999999999999999999998 58999999999999866555554310
Q ss_pred HHHhcCCcchhhhhhhhhccCCCCCcHHHHHHhcCc---------HHHHHHHHHcCCCe-------eecCCCCCCcchhc
Q psy8766 70 AVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGH---------IISLENLINLGACI-------NLKNNSNESPLHLA 133 (135)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~ll~~g~~~-------~~~~~~g~tpl~~a 133 (135)
..+.. ++..+..|+||||+|+..++ .+++++|+++|+++ +.+|..|.|||++|
T Consensus 164 ----~~ga~-------~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A 232 (260)
T 3jxi_A 164 ----HKQAD-------LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMA 232 (260)
T ss_dssp ----SCCCC-------TTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHH
T ss_pred ----ccCCC-------CcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHH
Confidence 03444 78889999999999998887 79999999999999 78999999999998
Q ss_pred cC
Q psy8766 134 AR 135 (135)
Q Consensus 134 ~~ 135 (135)
++
T Consensus 233 ~~ 234 (260)
T 3jxi_A 233 AK 234 (260)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 53
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=3.6e-28 Score=140.39 Aligned_cols=117 Identities=19% Similarity=0.139 Sum_probs=90.8
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCch-HHHHHHHhCCCchHHHHHHHHHHHhcCCcchh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRN-ILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQ 80 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t-~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (135)
+|+++|.++..|.||||+|+ .++.+++++|++.|++++.++..|.| |||+|+..++ ......++..+..
T Consensus 34 ~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~-------~~~v~~Ll~~ga~-- 103 (156)
T 1bi7_B 34 AGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF-------LDTLVVLHRAGAR-- 103 (156)
T ss_dssp TTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC-------HHHHHHHHHHTCC--
T ss_pred cCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCC-------HHHHHHHHHcCCC--
Confidence 68999999999999999985 89999999999999999999999999 9999999997 3455566666655
Q ss_pred hhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhc
Q psy8766 81 GIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLA 133 (135)
Q Consensus 81 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a 133 (135)
++..+..|+||||+|+..++.+++++|+++|++++.++..|.||.+.+
T Consensus 104 -----~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 104 -----LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp -----SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------------
T ss_pred -----CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccccC
Confidence 778889999999999999999999999999999999999999998754
No 54
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=1.6e-27 Score=147.85 Aligned_cols=117 Identities=14% Similarity=0.166 Sum_probs=78.1
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|+++|.++..|.||||+|+..++.+++++|++.|++++. +..|.||||+|+..++.++++++. +.+..
T Consensus 123 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll-------~~gad--- 191 (261)
T 2xai_A 123 YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLM-------DFGAD--- 191 (261)
T ss_dssp TTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHH-------HTTCC---
T ss_pred cCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHH-------HcCCC---
Confidence 3556666666666666666666666666666666666653 555666666666666543333333 33333
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCC--------eeecCCCCCCcchhccC
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGAC--------INLKNNSNESPLHLAAR 135 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~--------~~~~~~~g~tpl~~a~~ 135 (135)
++.++..|+||+++|+..+ +++++|++++.. ++.++..|.||++.|.+
T Consensus 192 ----~~~~d~~g~tpl~~A~~~~--~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~l~~~~~ 247 (261)
T 2xai_A 192 ----TQAKNAEGKRPVELVPPES--PLAQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITK 247 (261)
T ss_dssp ----TTCCCTTSCCGGGGSCTTC--THHHHHHHC-CCCCHHHHHHHHHHTTSCTTCGGGGGG
T ss_pred ----CCCcCCCCCChhhhccccc--cHHHHHHhccCCccHHHHHHHHHHHHhchhccccCcc
Confidence 6778999999999999665 488899998764 56789999999999864
No 55
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.95 E-value=3.9e-28 Score=150.05 Aligned_cols=116 Identities=22% Similarity=0.263 Sum_probs=100.0
Q ss_pred cccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccC-------------CchHHHHHHHhCCCchHHHHHHHHHHHhcC
Q psy8766 9 LDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDIN-------------RRNILHLLVLNGGGHIKEFAEEVAAVFLGE 75 (135)
Q Consensus 9 ~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~-------------g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~ 75 (135)
+|..|.||||+|+..|+.+++++|++.|++++.++.. |.||||+|+..++.+++++++... ..
T Consensus 86 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~----~~ 161 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP----HQ 161 (256)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS----SC
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc----cc
Confidence 4467999999999999999999999999999999876 999999999999866555554310 04
Q ss_pred CcchhhhhhhhhccCCCCCcHHHHHHh--cCcHH-------HHHHHHHcCCCe-------eecCCCCCCcchhccC
Q psy8766 76 GEASQGIQNLLNEKDKTGCSPLHYASR--EGHII-------SLENLINLGACI-------NLKNNSNESPLHLAAR 135 (135)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~t~l~~a~~--~~~~~-------~~~~ll~~g~~~-------~~~~~~g~tpl~~a~~ 135 (135)
+.. ++..+..|+||||+|+. .++.+ ++++|+++|+++ +.+|..|+|||++|++
T Consensus 162 ga~-------~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~ 230 (256)
T 2etb_A 162 PAS-------LEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAK 230 (256)
T ss_dssp CCC-------TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CCC-------cCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHH
Confidence 444 78889999999999998 78888 999999999999 8999999999999863
No 56
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.95 E-value=4.1e-28 Score=151.64 Aligned_cols=122 Identities=18% Similarity=0.194 Sum_probs=80.7
Q ss_pred ccccccCCChHHHHHHHhCCHHHHHHHHHcCC-CccccccCCchHHHHHHHh-----CCCchHHHHHH------------
Q psy8766 6 LNVLDKEKRSPLLLAASRGGWKTVLTLVRNKA-NILLKDINRRNILHLLVLN-----GGGHIKEFAEE------------ 67 (135)
Q Consensus 6 ~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~-~~~~~~~~g~t~l~~a~~~-----~~~~~~~~~~~------------ 67 (135)
+|.+|.+|.||||+|+..|+.+++++|++.|+ +++..+..|.||||+|+.. ++.+++.++..
T Consensus 104 ~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g 183 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAG 183 (276)
T ss_dssp HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC
T ss_pred CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC
Confidence 78889999999999999999999999999987 7777777766666666622 22222222211
Q ss_pred --------------HHHHHhcCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHH-cCCCeeecCCCCCCcchh
Q psy8766 68 --------------VAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLIN-LGACINLKNNSNESPLHL 132 (135)
Q Consensus 68 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~-~g~~~~~~~~~g~tpl~~ 132 (135)
....++..+.. ++..+..|+||||+|+..|+.+++++|++ .|++++.+|..|.|||++
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~gad-------~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~ 256 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLACEAD-------VNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMV 256 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC-------TTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhCCCC-------CCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHH
Confidence 11222222222 45566667777777777777777777776 677777777777777776
Q ss_pred cc
Q psy8766 133 AA 134 (135)
Q Consensus 133 a~ 134 (135)
|+
T Consensus 257 A~ 258 (276)
T 4hbd_A 257 AL 258 (276)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 57
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.95 E-value=3.6e-28 Score=156.81 Aligned_cols=120 Identities=18% Similarity=0.155 Sum_probs=104.8
Q ss_pred ccccccCCChHHHHHHHhC--CHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhh
Q psy8766 6 LNVLDKEKRSPLLLAASRG--GWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQ 83 (135)
Q Consensus 6 ~n~~~~~g~tpl~~a~~~~--~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (135)
++.++..|.||||+|+..| +.+++++|++.|++++.+|..|.||||+|+..|+.+++++++...... ...
T Consensus 131 ~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~--~~~------ 202 (364)
T 3ljn_A 131 SHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSK--SSL------ 202 (364)
T ss_dssp TEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCS--SSC------
T ss_pred cccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccc--ccc------
Confidence 3448899999999999999 999999999999999999999999999999999977777766543210 011
Q ss_pred hhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 84 NLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 84 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
.++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+
T Consensus 203 -~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 252 (364)
T 3ljn_A 203 -RLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSV 252 (364)
T ss_dssp -CTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred -cccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 15677889999999999999999999999999999999999999999986
No 58
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=1.8e-27 Score=144.65 Aligned_cols=112 Identities=27% Similarity=0.324 Sum_probs=66.6
Q ss_pred cccCCChHHHHHHHhCCHHHHHHHHHcC--CCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhh
Q psy8766 9 LDKEKRSPLLLAASRGGWKTVLTLVRNK--ANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLL 86 (135)
Q Consensus 9 ~~~~g~tpl~~a~~~~~~~~~~~Ll~~g--~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (135)
.+..|.||||+|+..|+.+++++|++.| ++++..+..|.||||+|+..++.++++++.+ .+.. +
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~-------~g~~-------~ 133 (228)
T 2dzn_A 68 PDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIE-------NGAS-------V 133 (228)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH-------TTCC-------S
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHH-------cCCC-------c
Confidence 3444444444444444444444444444 4444444444444444444444333322222 2222 4
Q ss_pred hccCCCCCcHHHHHHhcCcHHHHHHHHHcC-CCeeecCCCCCCcchhcc
Q psy8766 87 NEKDKTGCSPLHYASREGHIISLENLINLG-ACINLKNNSNESPLHLAA 134 (135)
Q Consensus 87 ~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g-~~~~~~~~~g~tpl~~a~ 134 (135)
+..+..|+||||+|+..++.+++++|++.| ++++.+|..|+|||++|+
T Consensus 134 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~ 182 (228)
T 2dzn_A 134 RIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHAL 182 (228)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHH
Confidence 566777888888888888888888888887 888888888888888775
No 59
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.95 E-value=8.1e-28 Score=150.92 Aligned_cols=114 Identities=18% Similarity=0.119 Sum_probs=100.4
Q ss_pred CccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhh
Q psy8766 5 DLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQN 84 (135)
Q Consensus 5 ~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (135)
++|.+|..|.||||+|+..|+.+++++|++.|++++.++ |.||||+|+..|+.++++++... +..
T Consensus 23 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~-------ga~------ 87 (285)
T 3kea_A 23 DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFS-------GLD------ 87 (285)
T ss_dssp TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHT-------TCC------
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHC-------CCC------
Confidence 688999999999999999999999999999999998874 89999999999988777766653 333
Q ss_pred hhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCC-CCcchhcc
Q psy8766 85 LLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSN-ESPLHLAA 134 (135)
Q Consensus 85 ~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g-~tpl~~a~ 134 (135)
++..+..|+||||+|+..|+.+++++|+++|++++.++..| .|||++|+
T Consensus 88 -~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~ 137 (285)
T 3kea_A 88 -DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAV 137 (285)
T ss_dssp -TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHH
T ss_pred -CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHH
Confidence 67788889999999999999999999999999999999998 79999886
No 60
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=4.7e-27 Score=147.42 Aligned_cols=103 Identities=17% Similarity=0.197 Sum_probs=66.0
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|++++.+|..|.||||+|+..++.+++++|++.|++++. +..|.||||+|+..++.++++++. +.+..
T Consensus 179 ~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll-------~~gad--- 247 (285)
T 3d9h_A 179 YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLM-------DFGAD--- 247 (285)
T ss_dssp TTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHH-------HTTCC---
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHH-------HCCCC---
Confidence 3566666666666666666666666666666666666663 566666666666666544443333 23333
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHc-CCCeee
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINL-GACINL 121 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~-g~~~~~ 121 (135)
++.++..|+|||++|+ ++.+++++|+++ |+++..
T Consensus 248 ----~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~a~l~~ 282 (285)
T 3d9h_A 248 ----TQAKNAEGKRPVELVP--PESPLAQLFLEREGASLPK 282 (285)
T ss_dssp ----TTCCCTTSCCGGGGSC--TTSHHHHHHHHHC------
T ss_pred ----CCCcCCCCCCHHHHhc--CccHHHHHHHHhhccCCCC
Confidence 6778999999999999 456899999987 777654
No 61
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.94 E-value=3.8e-27 Score=152.71 Aligned_cols=123 Identities=23% Similarity=0.336 Sum_probs=108.5
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|+++|.+|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++.......
T Consensus 155 ~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~--------- 225 (373)
T 2fo1_E 155 AGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLK--------- 225 (373)
T ss_dssp TCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHH---------
T ss_pred cCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccc---------
Confidence 58999999999999999999999999999999999999999999999999999999877777666543210
Q ss_pred hhhhhhccCCCCCcHHHHHHhcC---cHHHHHHHHHcCCCeee--------cCCCCCCcchhccC
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREG---HIISLENLINLGACINL--------KNNSNESPLHLAAR 135 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~---~~~~~~~ll~~g~~~~~--------~~~~g~tpl~~a~~ 135 (135)
..++..+..|.||||+|+..+ +.+++++|++.|++++. .|..|.||||+|++
T Consensus 226 --~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~ 288 (373)
T 2fo1_E 226 --GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQ 288 (373)
T ss_dssp --HTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHS
T ss_pred --cChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHH
Confidence 116778899999999999988 89999999999999986 57789999999874
No 62
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.94 E-value=4.5e-28 Score=149.12 Aligned_cols=110 Identities=25% Similarity=0.322 Sum_probs=98.6
Q ss_pred ccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhcc
Q psy8766 10 DKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEK 89 (135)
Q Consensus 10 ~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (135)
+..|.||||+|+..|+.+++++|++ |++++.+|..|.||||+|+..|+.+++++++. .+.. ++..
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~-------~ga~-------~~~~ 106 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAE-------AGAD-------LDHR 106 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHH-------TTCC-------TTCC
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHH-------cCCC-------CCcC
Confidence 3578999999999999999999999 99999999999999999999998666655554 3443 6666
Q ss_pred C-CCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 90 D-KTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 90 ~-~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
+ ..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+
T Consensus 107 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~ 152 (244)
T 3ui2_A 107 DMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAR 152 (244)
T ss_dssp CSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 6 78999999999999999999999999999999999999999986
No 63
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.94 E-value=2.5e-27 Score=144.45 Aligned_cols=115 Identities=18% Similarity=0.167 Sum_probs=101.3
Q ss_pred cccccCCChHHHHHHHhCCHHHHHHHHHcCCCcccccc-------------CCchHHHHHHHhCCCchHHHHHHHHHHHh
Q psy8766 7 NVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDI-------------NRRNILHLLVLNGGGHIKEFAEEVAAVFL 73 (135)
Q Consensus 7 n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~-------------~g~t~l~~a~~~~~~~~~~~~~~~~~~~~ 73 (135)
+.+|..|.||||+|+..|+.+++++|++.|++++.++. .|.||||+|+..++.++++++.+
T Consensus 69 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------ 142 (232)
T 2rfa_A 69 TSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE------ 142 (232)
T ss_dssp CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH------
T ss_pred cccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH------
Confidence 67788999999999999999999999999999988765 79999999999998666665554
Q ss_pred cCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHH----HHHHHcCCCe------eecCCCCCCcchhccC
Q psy8766 74 GEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISL----ENLINLGACI------NLKNNSNESPLHLAAR 135 (135)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~----~~ll~~g~~~------~~~~~~g~tpl~~a~~ 135 (135)
.+.. ++..+..|+||||+|+..++.+++ ++|+++|+++ +.+|..|.|||++|++
T Consensus 143 -~ga~-------~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~ 206 (232)
T 2rfa_A 143 -HGAD-------IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGV 206 (232)
T ss_dssp -TTCC-------TTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHH
T ss_pred -CCCC-------CCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHH
Confidence 3444 788899999999999999999988 9999999988 5889999999999863
No 64
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.94 E-value=6.1e-27 Score=149.91 Aligned_cols=119 Identities=25% Similarity=0.263 Sum_probs=108.5
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
.+.++|.+|..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..|+.++++++... +..
T Consensus 47 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-------g~~--- 116 (351)
T 3utm_A 47 LNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKH-------GAC--- 116 (351)
T ss_dssp TTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-------TCC---
T ss_pred cCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHC-------CCC---
Confidence 4789999999999999999999999999999999999999999999999999999987766666543 333
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|.||||+|+..++.+++++|+++|++++..+..|.+|+++|+
T Consensus 117 ----~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~ 165 (351)
T 3utm_A 117 ----VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAP 165 (351)
T ss_dssp ----TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCS
T ss_pred ----CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHh
Confidence 6778889999999999999999999999999999999999999999875
No 65
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.94 E-value=2.3e-27 Score=138.23 Aligned_cols=109 Identities=19% Similarity=0.142 Sum_probs=98.8
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhccCC
Q psy8766 12 EKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEKDK 91 (135)
Q Consensus 12 ~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (135)
.|.||||.|+..|+.+++++|++.|.+++.++..|.||||+|+..++.++++++.. .+.. ++..+.
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~-------~~~~~~ 67 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQ-------NGAD-------PQLLGK 67 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-------TTCC-------TTCCCT
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHH-------cCCC-------CCCcCC
Confidence 58899999999999999999999999999999999999999999998666655554 3333 677888
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 92 TGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 92 ~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
.|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+
T Consensus 68 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 110 (167)
T 3v31_A 68 GRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAV 110 (167)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHHHHH
Confidence 9999999999999999999999999999999999999999986
No 66
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=8.2e-28 Score=150.31 Aligned_cols=102 Identities=19% Similarity=0.156 Sum_probs=88.8
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
.|.+++..+..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++++. ..+..
T Consensus 172 ~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~------~~gad--- 242 (276)
T 4hbd_A 172 LGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLA------VPSCD--- 242 (276)
T ss_dssp HSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHT------STTCC---
T ss_pred cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHh------cCCCC---
Confidence 366778888899999999999999999999999999999999999999999999998655555442 13444
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcC
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLG 116 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g 116 (135)
++..+..|+|||++|+..|+.+++++|++++
T Consensus 243 ----~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 243 ----ISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp ----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred ----CcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 7788999999999999999999999999874
No 67
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.94 E-value=1.1e-27 Score=149.25 Aligned_cols=115 Identities=22% Similarity=0.213 Sum_probs=99.4
Q ss_pred cccCCChHHHHHHHhCCHHHHHHHHHcCCCcccccc--------------CCchHHHHHHHhCCCchHHHHHHHHHHHhc
Q psy8766 9 LDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDI--------------NRRNILHLLVLNGGGHIKEFAEEVAAVFLG 74 (135)
Q Consensus 9 ~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~--------------~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~ 74 (135)
+|..|.||||+|+..|+.+++++|++.|++++.++. .|.||||+|+..++.+++++++... .
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~----~ 172 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNS----W 172 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCS----S
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc----c
Confidence 567899999999999999999999999999999987 7999999999999866555554310 0
Q ss_pred CCcchhhhhhhhhccCCCCCcHHHHHHhcCc---------HHHHHHHHHcCCCee-------ecCCCCCCcchhcc
Q psy8766 75 EGEASQGIQNLLNEKDKTGCSPLHYASREGH---------IISLENLINLGACIN-------LKNNSNESPLHLAA 134 (135)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~ll~~g~~~~-------~~~~~g~tpl~~a~ 134 (135)
.+.. ++..+..|+||||+|+..++ .+++++|+++|++++ .+|..|.|||++|+
T Consensus 173 ~gad-------~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~ 241 (273)
T 2pnn_A 173 QPAD-------ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAA 241 (273)
T ss_dssp CCCC-------TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHH
T ss_pred CCCC-------ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHH
Confidence 3444 78889999999999999888 799999999999996 58999999999986
No 68
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.94 E-value=6.1e-27 Score=151.09 Aligned_cols=132 Identities=23% Similarity=0.162 Sum_probs=85.3
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHh--------
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFL-------- 73 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~-------- 73 (135)
+|+++|.+|..|.||||+|+..|+.+++++|++.|++++. ..|.||||+|+..++.++++++.......-
T Consensus 42 ~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~ 119 (364)
T 3ljn_A 42 TGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL--WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLN 119 (364)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCCCCC--BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHT
T ss_pred cCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCCccc--cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHh
Confidence 4677777777777777777777777777777777775543 356677777777776666666665421110
Q ss_pred ---------------------------cCCc-chhhhhhh------hhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCC-
Q psy8766 74 ---------------------------GEGE-ASQGIQNL------LNEKDKTGCSPLHYASREGHIISLENLINLGAC- 118 (135)
Q Consensus 74 ---------------------------~~~~-~~~~~~~~------~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~- 118 (135)
..+. ....+..+ ++..+..|+||||+|+..|+.+++++|+++|++
T Consensus 120 ~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~ 199 (364)
T 3ljn_A 120 ECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSK 199 (364)
T ss_dssp CCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCS
T ss_pred hcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccc
Confidence 0000 01111111 345666777888888888888888888877777
Q ss_pred ----eeecCCCCCCcchhccC
Q psy8766 119 ----INLKNNSNESPLHLAAR 135 (135)
Q Consensus 119 ----~~~~~~~g~tpl~~a~~ 135 (135)
++.+|..|.||||+|++
T Consensus 200 ~~~~~~~~~~~g~t~L~~A~~ 220 (364)
T 3ljn_A 200 SSLRLDYANKQGNSHLHWAIL 220 (364)
T ss_dssp SSCCTTCCCTTCCCTTHHHHT
T ss_pred ccccccccCCCCCcHHHHHHH
Confidence 77777778888887763
No 69
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.94 E-value=1.1e-26 Score=127.86 Aligned_cols=111 Identities=27% Similarity=0.355 Sum_probs=95.7
Q ss_pred cccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhh
Q psy8766 7 NVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLL 86 (135)
Q Consensus 7 n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (135)
..+|.+|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..++.++++ .++..+.. +
T Consensus 3 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~-------~Ll~~g~~-------~ 68 (115)
T 2l6b_A 3 MWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVK-------LLLAKGAD-------V 68 (115)
T ss_dssp -CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHH-------HHTTTTCC-------T
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHH-------HHHHcCCC-------C
Confidence 357889999999999999999999999999999999999999999999999755444 44444544 6
Q ss_pred hccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcch
Q psy8766 87 NEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLH 131 (135)
Q Consensus 87 ~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~ 131 (135)
+..+..|+||||+|+..++.+++++|+++|++++.++..|.+|-.
T Consensus 69 ~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~~ 113 (115)
T 2l6b_A 69 NARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113 (115)
T ss_dssp TCCCTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC----
T ss_pred cccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCcccccccc
Confidence 778889999999999999999999999999999999999998853
No 70
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.94 E-value=9.6e-27 Score=123.65 Aligned_cols=93 Identities=39% Similarity=0.547 Sum_probs=82.1
Q ss_pred CCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhccCC
Q psy8766 12 EKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEKDK 91 (135)
Q Consensus 12 ~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (135)
+|+||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.++++++.. .+.. ++..+.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~-------~ga~-------~~~~d~ 66 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE-------AGAD-------VNAKDK 66 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-------TTCC-------TTCCCT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC-------CCccCC
Confidence 48999999999999999999999999999999999999999999998666655544 3444 678889
Q ss_pred CCCcHHHHHHhcCcHHHHHHHHHcCCC
Q psy8766 92 TGCSPLHYASREGHIISLENLINLGAC 118 (135)
Q Consensus 92 ~~~t~l~~a~~~~~~~~~~~ll~~g~~ 118 (135)
.|+||||+|+..++.+++++|+++|++
T Consensus 67 ~g~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 67 NGRTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999999999875
No 71
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.94 E-value=2.6e-27 Score=148.66 Aligned_cols=116 Identities=20% Similarity=0.206 Sum_probs=71.1
Q ss_pred CCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCC-chHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINR-RNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 3 g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g-~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
|+++|.+|..|.||||+|+..|+.+++++|+++|++++.++..| .||||+|+..++.++++++. ..+.
T Consensus 85 ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll-------~~g~---- 153 (285)
T 3kea_A 85 GLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFL-------SEIP---- 153 (285)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHH-------TTSC----
T ss_pred CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHH-------hCCC----
Confidence 44444444444444444444444444444444444444444444 44444444444433222222 1111
Q ss_pred hhhhhhccCC-CCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCc-chhcc
Q psy8766 82 IQNLLNEKDK-TGCSPLHYASREGHIISLENLINLGACINLKNNSNESP-LHLAA 134 (135)
Q Consensus 82 ~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tp-l~~a~ 134 (135)
...+. .|.||||+|+..|+.+++++|+++|++++.++..|.|| |++|+
T Consensus 154 -----~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~ 203 (285)
T 3kea_A 154 -----STFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAI 203 (285)
T ss_dssp -----TTCCCSTHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHH
T ss_pred -----ccccccCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHH
Confidence 11222 78899999999999999999999999999999999998 99886
No 72
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=2.6e-27 Score=144.52 Aligned_cols=103 Identities=18% Similarity=0.111 Sum_probs=90.1
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|+++|.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..|+.++++++. +.+..
T Consensus 43 ~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll-------~~ga~--- 112 (229)
T 2vge_A 43 EMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALV-------QHGAA--- 112 (229)
T ss_dssp HSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHH-------TTTCC---
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH-------HcCCC---
Confidence 58899999999999999999999999999999999999999999999999999999865555444 44444
Q ss_pred hhhhhhccC-CCCCcHHHHH--HhcCcHHHHHHHHHcCCC
Q psy8766 82 IQNLLNEKD-KTGCSPLHYA--SREGHIISLENLINLGAC 118 (135)
Q Consensus 82 ~~~~~~~~~-~~~~t~l~~a--~~~~~~~~~~~ll~~g~~ 118 (135)
++..+ ..|+||||+| +..++.+++++|+++|++
T Consensus 113 ----~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~ 148 (229)
T 2vge_A 113 ----IFATTLSDGATAFEKCDPYREGYADCATYLADVEQS 148 (229)
T ss_dssp ----TTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH
T ss_pred ----cccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCC
Confidence 56665 6999999999 999999999999987544
No 73
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.94 E-value=6.4e-27 Score=136.71 Aligned_cols=111 Identities=33% Similarity=0.419 Sum_probs=98.9
Q ss_pred ccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhcc
Q psy8766 10 DKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEK 89 (135)
Q Consensus 10 ~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (135)
...+.+||+.|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++.. .+.. ++..
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~-------~~~~ 76 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLK-------NGAD-------VNAV 76 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-------TTCC-------TTCC
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC-------CCcc
Confidence 4566799999999999999999999999999999999999999999998666665554 3333 6778
Q ss_pred CCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 90 DKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 90 ~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
+..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+
T Consensus 77 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 121 (169)
T 2y1l_E 77 DHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAA 121 (169)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 889999999999999999999999999999999999999999986
No 74
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.94 E-value=2.1e-26 Score=140.63 Aligned_cols=132 Identities=24% Similarity=0.257 Sum_probs=85.1
Q ss_pred CCCccccc-cCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCC-----
Q psy8766 3 GADLNVLD-KEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEG----- 76 (135)
Q Consensus 3 g~~~n~~~-~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~----- 76 (135)
|.+++..+ ..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.++++++...........
T Consensus 65 ~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t 144 (240)
T 3eu9_A 65 GAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMT 144 (240)
T ss_dssp TCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCc
Confidence 44454333 236666666666666666666666666666666666666666666666555555544211110000
Q ss_pred ---------cchhhhh------hhhhccCC-CCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 77 ---------EASQGIQ------NLLNEKDK-TGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 77 ---------~~~~~~~------~~~~~~~~-~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
....... ..++..+. .|.||||+|+..++.+++++|+++|++++.++..|.||+++|+
T Consensus 145 ~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 218 (240)
T 3eu9_A 145 PLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAK 218 (240)
T ss_dssp HHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHH
T ss_pred HHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 0000000 00344554 8899999999999999999999999999999999999999986
No 75
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.94 E-value=2e-26 Score=143.74 Aligned_cols=119 Identities=25% Similarity=0.297 Sum_probs=106.0
Q ss_pred CCCCcccc-ccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchh
Q psy8766 2 TGADLNVL-DKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQ 80 (135)
Q Consensus 2 ~g~~~n~~-~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (135)
+|.++|.. +..|.||||+|+..|+.+++++|++.|++++.++..|.||||+|+..++.++++++.. .+..
T Consensus 27 ~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~-- 97 (285)
T 1wdy_A 27 GGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLS-------KGAD-- 97 (285)
T ss_dssp TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH-------TTCC--
T ss_pred cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC--
Confidence 57889888 7889999999999999999999999999999999999999999999998666665554 3333
Q ss_pred hhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeec----------CCCCCCcchhcc
Q psy8766 81 GIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLK----------NNSNESPLHLAA 134 (135)
Q Consensus 81 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~----------~~~g~tpl~~a~ 134 (135)
++..+..|.||||+|+..++.+++++|++.|++++.. +..|.|||++|+
T Consensus 98 -----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~ 156 (285)
T 1wdy_A 98 -----VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAA 156 (285)
T ss_dssp -----TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHH
T ss_pred -----CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHH
Confidence 6778889999999999999999999999999999887 778999999986
No 76
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.94 E-value=5.2e-27 Score=145.28 Aligned_cols=119 Identities=18% Similarity=0.133 Sum_probs=100.2
Q ss_pred CCCCccccc----cCCChHHHHHH---HhCCHHHHHHHHHcCCC-----------ccccccCCchHHHHHHHhCCCchHH
Q psy8766 2 TGADLNVLD----KEKRSPLLLAA---SRGGWKTVLTLVRNKAN-----------ILLKDINRRNILHLLVLNGGGHIKE 63 (135)
Q Consensus 2 ~g~~~n~~~----~~g~tpl~~a~---~~~~~~~~~~Ll~~g~~-----------~~~~~~~g~t~l~~a~~~~~~~~~~ 63 (135)
+|++++..+ ..|.||||+|+ ..|+.+++++|++.|++ ....|..|.||||+|+..|+.++++
T Consensus 31 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~ 110 (260)
T 3jxi_A 31 HKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVE 110 (260)
T ss_dssp HTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHH
T ss_pred cCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHH
Confidence 467777666 67999999999 67999999999998754 4455669999999999999977666
Q ss_pred HHHHHHHHHhcCCcchhhhhhhhhccC--------------CCCCcHHHHHHhcCcHHHHHHHHH---cCCCeeecCCCC
Q psy8766 64 FAEEVAAVFLGEGEASQGIQNLLNEKD--------------KTGCSPLHYASREGHIISLENLIN---LGACINLKNNSN 126 (135)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~t~l~~a~~~~~~~~~~~ll~---~g~~~~~~~~~g 126 (135)
++++. +.. ++..+ ..|+||||+|+..|+.+++++|++ .|++++.+|..|
T Consensus 111 ~Ll~~-------ga~-------~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g 176 (260)
T 3jxi_A 111 LLVEK-------GAD-------VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRG 176 (260)
T ss_dssp HHHHT-------TCC-------TTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTS
T ss_pred HHHhC-------CCC-------cCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCC
Confidence 66553 333 44454 579999999999999999999999 999999999999
Q ss_pred CCcchhcc
Q psy8766 127 ESPLHLAA 134 (135)
Q Consensus 127 ~tpl~~a~ 134 (135)
+||||+|+
T Consensus 177 ~TpLh~A~ 184 (260)
T 3jxi_A 177 NTVLHALV 184 (260)
T ss_dssp CCHHHHHH
T ss_pred CcHHHHHH
Confidence 99999987
No 77
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.94 E-value=6.4e-27 Score=147.83 Aligned_cols=114 Identities=18% Similarity=0.170 Sum_probs=97.7
Q ss_pred CCCCccc------cccCCChHHHHHHHh---CCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHH
Q psy8766 2 TGADLNV------LDKEKRSPLLLAASR---GGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVF 72 (135)
Q Consensus 2 ~g~~~n~------~~~~g~tpl~~a~~~---~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~ 72 (135)
.|+|+|. .+..|.||||+|+.. ++.+++++|++.|++++.+|..|.||||+|+..|+.+++++++.
T Consensus 173 ~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~----- 247 (301)
T 2b0o_E 173 NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLK----- 247 (301)
T ss_dssp TTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH-----
T ss_pred cCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-----
Confidence 5788887 688999999999997 89999999999999999999999999999999998666555544
Q ss_pred hcCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhccC
Q psy8766 73 LGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~~ 135 (135)
.+.. ++..+..|+|||++|+..++.+++++|++.|++ .|.|||++|++
T Consensus 248 --~gad-------~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~ 295 (301)
T 2b0o_E 248 --GRAL-------VGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYS 295 (301)
T ss_dssp --TTCC-------CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC----
T ss_pred --cCCC-------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHh
Confidence 4444 778899999999999999999999999998876 58999999974
No 78
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.93 E-value=1.3e-26 Score=135.58 Aligned_cols=114 Identities=25% Similarity=0.200 Sum_probs=97.5
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|++++.++..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.++++++.. .+..
T Consensus 58 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~ga~--- 127 (172)
T 3v30_A 58 WGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLA-------RGAD--- 127 (172)
T ss_dssp HTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-------TTCC---
T ss_pred cCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC---
Confidence 488999999999999999999999999999999999999999999999999999998766666554 3433
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCc
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESP 129 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tp 129 (135)
++..+..|.|||++|+..++.+++++|+++|+++...+..|.||
T Consensus 128 ----~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 128 ----LTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171 (172)
T ss_dssp ----TTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-------
T ss_pred ----ccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCCCC
Confidence 67788999999999999999999999999999998888888887
No 79
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.93 E-value=5.8e-26 Score=131.63 Aligned_cols=104 Identities=22% Similarity=0.207 Sum_probs=91.9
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|++++.++..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.++++++......
T Consensus 59 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---------- 128 (162)
T 1ihb_A 59 RGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS---------- 128 (162)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC----------
T ss_pred cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC----------
Confidence 5899999999999999999999999999999999999999999999999999999987777666654321
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCC
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGAC 118 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~ 118 (135)
.++..+..|+||||+|+..++.+++++|+++|++
T Consensus 129 ---~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 129 ---NVGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp ---CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC--
T ss_pred ---CCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCCC
Confidence 1467788999999999999999999999999985
No 80
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.93 E-value=9.5e-27 Score=150.84 Aligned_cols=133 Identities=23% Similarity=0.291 Sum_probs=89.6
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcC---CCccccccCCchHHHHHHHhC---CCchHHHHHHHHHHHhc-
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNK---ANILLKDINRRNILHLLVLNG---GGHIKEFAEEVAAVFLG- 74 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g---~~~~~~~~~g~t~l~~a~~~~---~~~~~~~~~~~~~~~~~- 74 (135)
+|++++.++..|.||||+|+..|+.+++++|++.+ ++++..+..|.||||+|+..+ +.++++++.........
T Consensus 188 ~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~ 267 (373)
T 2fo1_E 188 AGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYD 267 (373)
T ss_dssp TTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCC
T ss_pred CCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccc
Confidence 46677777777777777777777777777777665 566666667777777766665 34444444433211110
Q ss_pred ----------CCc----------chhhhh-------hhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCC
Q psy8766 75 ----------EGE----------ASQGIQ-------NLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNE 127 (135)
Q Consensus 75 ----------~~~----------~~~~~~-------~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~ 127 (135)
.+. ....+. ..++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.
T Consensus 268 ~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~ 347 (373)
T 2fo1_E 268 GAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDH 347 (373)
T ss_dssp SGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSC
T ss_pred cccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCC
Confidence 000 000000 11456778899999999999999999999999999999999999
Q ss_pred Ccchhcc
Q psy8766 128 SPLHLAA 134 (135)
Q Consensus 128 tpl~~a~ 134 (135)
|||++|+
T Consensus 348 t~l~~A~ 354 (373)
T 2fo1_E 348 TARQLAQ 354 (373)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 9999986
No 81
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=7.7e-26 Score=127.86 Aligned_cols=101 Identities=30% Similarity=0.341 Sum_probs=90.5
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|+++|.+|..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..++.++++++.. .+..
T Consensus 36 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~--- 105 (136)
T 2jab_A 36 NGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLK-------HGAD--- 105 (136)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH-------TTCC---
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC---
Confidence 589999999999999999999999999999999999999999999999999999998666665554 3333
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcC
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLG 116 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g 116 (135)
++..+..|+|||++|+..++.+++++|+++|
T Consensus 106 ----~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 106 ----VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred ----CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 6778899999999999999999999999876
No 82
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.93 E-value=6.6e-27 Score=132.26 Aligned_cols=102 Identities=22% Similarity=0.157 Sum_probs=92.0
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccC-CchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDIN-RRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQ 80 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (135)
+|+++|.++..|.||||+|+. ++.+++++|+++|++++.++.. |.||||+|+..++.++++++.. .+..
T Consensus 34 ~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~ga~-- 103 (136)
T 1d9s_A 34 AGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHR-------AGAR-- 103 (136)
T ss_dssp TTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHH-------TCCC--
T ss_pred cCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC--
Confidence 589999999999999999999 9999999999999999999999 9999999999998666655554 3443
Q ss_pred hhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCC
Q psy8766 81 GIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGAC 118 (135)
Q Consensus 81 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~ 118 (135)
++..+..|+||||+|+..++.+++++|+++|+|
T Consensus 104 -----~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 104 -----LDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp -----CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred -----CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 677889999999999999999999999999875
No 83
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=9.4e-26 Score=140.74 Aligned_cols=133 Identities=23% Similarity=0.208 Sum_probs=101.0
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcC------
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGE------ 75 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~------ 75 (135)
+|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.++++++..........
T Consensus 61 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~ 140 (285)
T 1wdy_A 61 HGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKED 140 (285)
T ss_dssp TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHH
T ss_pred cCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHH
Confidence 58899999999999999999999999999999999999999999999999999999988877776542211100
Q ss_pred -------Cc----------chhhhhh-------hhhccCCCCCcHHHHHHhcCc----HHHHHHHHHcCCCeeecCCCCC
Q psy8766 76 -------GE----------ASQGIQN-------LLNEKDKTGCSPLHYASREGH----IISLENLINLGACINLKNNSNE 127 (135)
Q Consensus 76 -------~~----------~~~~~~~-------~~~~~~~~~~t~l~~a~~~~~----~~~~~~ll~~g~~~~~~~~~g~ 127 (135)
+. ....+.. .++..+..|.||||+|+..++ .+++++|+++|++++.++..|.
T Consensus 141 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~ 220 (285)
T 1wdy_A 141 QERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGK 220 (285)
T ss_dssp HHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSC
T ss_pred HHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCC
Confidence 00 0000010 134455667777777777777 7777777777777777777777
Q ss_pred Ccchhcc
Q psy8766 128 SPLHLAA 134 (135)
Q Consensus 128 tpl~~a~ 134 (135)
||||+|+
T Consensus 221 t~L~~A~ 227 (285)
T 1wdy_A 221 TPLILAV 227 (285)
T ss_dssp CHHHHHH
T ss_pred cHHHHHH
Confidence 8877775
No 84
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.93 E-value=1.1e-25 Score=137.47 Aligned_cols=119 Identities=24% Similarity=0.223 Sum_probs=94.4
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccc-cCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKD-INRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQ 80 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (135)
+|++++.++..|.||||+|+..|+.+++++|++.|.+++..+ ..|.||||+|+..++.++++++.+ .+..
T Consensus 31 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~-------~g~~-- 101 (240)
T 3eu9_A 31 AGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMK-------YGAD-- 101 (240)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHH-------TTCC--
T ss_pred cCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHH-------cCCC--
Confidence 577888888888888888888888888888888888777554 448888888888887655555443 2332
Q ss_pred hhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 81 GIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 81 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|.||||+|+..++.+++++|+++|++++.++..|.|||++|+
T Consensus 102 -----~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~ 150 (240)
T 3eu9_A 102 -----PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAA 150 (240)
T ss_dssp -----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred -----CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHH
Confidence 5667778889999999999999999999999999888888999998875
No 85
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.93 E-value=3.7e-26 Score=143.85 Aligned_cols=112 Identities=28% Similarity=0.415 Sum_probs=101.1
Q ss_pred ccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhcc
Q psy8766 10 DKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEK 89 (135)
Q Consensus 10 ~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (135)
+..|.||||.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++++. .+.. ++..
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-------~ga~-------~~~~ 102 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVE-------NGAN-------INQP 102 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHH-------TTCC-------TTCC
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHH-------CCCC-------CCCC
Confidence 4567899999999999999999999999999999999999999999998766666554 3333 6778
Q ss_pred CCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhccC
Q psy8766 90 DKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 90 ~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~~ 135 (135)
+..|+||||+|+..|+.+++++|+++|++++.++..|.|||++|++
T Consensus 103 ~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~ 148 (299)
T 1s70_B 103 DNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEE 148 (299)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCS
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHh
Confidence 8899999999999999999999999999999999999999999864
No 86
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.93 E-value=2e-25 Score=142.74 Aligned_cols=134 Identities=22% Similarity=0.219 Sum_probs=101.2
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCcccc----------ccCCchHHHHHHHhCCCchHHHHHHHH-H
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLK----------DINRRNILHLLVLNGGGHIKEFAEEVA-A 70 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~----------~~~g~t~l~~a~~~~~~~~~~~~~~~~-~ 70 (135)
.++++|.+|..|.||||+|+..|+.+++++|++.|++++.+ +..|.||||+|+..|+.+++++++... .
T Consensus 114 ~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~ga 193 (337)
T 4g8k_A 114 KGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGA 193 (337)
T ss_dssp TTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCC
T ss_pred ccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCC
Confidence 46788888999999999999999999999999998887654 446889999999999888888776421 0
Q ss_pred H----------------HhcCCcchhhhhh-------hhhccCCCCCcHHHHHHhcCcHHHHHHHHHc-CCCeeecCCCC
Q psy8766 71 V----------------FLGEGEASQGIQN-------LLNEKDKTGCSPLHYASREGHIISLENLINL-GACINLKNNSN 126 (135)
Q Consensus 71 ~----------------~~~~~~~~~~~~~-------~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~-g~~~~~~~~~g 126 (135)
. ..........+.. .++.++..|+||||+|+..++.++++.|++. |++++.+|..|
T Consensus 194 d~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G 273 (337)
T 4g8k_A 194 DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDG 273 (337)
T ss_dssp CTTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTS
T ss_pred CcCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCC
Confidence 0 0000000001100 1456778899999999999999999999975 89999999999
Q ss_pred CCcchhccC
Q psy8766 127 ESPLHLAAR 135 (135)
Q Consensus 127 ~tpl~~a~~ 135 (135)
+||||+|++
T Consensus 274 ~TpL~~A~~ 282 (337)
T 4g8k_A 274 KTALLLAVE 282 (337)
T ss_dssp CBHHHHHHH
T ss_pred CCHHHHHHH
Confidence 999999863
No 87
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.93 E-value=2.9e-26 Score=133.32 Aligned_cols=112 Identities=30% Similarity=0.326 Sum_probs=98.6
Q ss_pred cccCCChHHHHHHHhCCHHHHHHHHH-cCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhh
Q psy8766 9 LDKEKRSPLLLAASRGGWKTVLTLVR-NKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLN 87 (135)
Q Consensus 9 ~~~~g~tpl~~a~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (135)
.+.+|.||||.|+..|+.+++++|++ .+.+++..+..|.||||+|+..++.++++++.. .+.. ++
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~-------~~ 69 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQ-------HGAD-------VH 69 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHH-------TTCC-------TT
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHh-------cCCC-------CC
Confidence 35778999999999999999999997 577888889999999999999998666666554 3333 67
Q ss_pred ccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 88 EKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 88 ~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
..+..|+||||+|+..++.+++++|+++|++++.+|..|.|||++|+
T Consensus 70 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 116 (165)
T 3twr_A 70 AKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAA 116 (165)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHH
Confidence 78889999999999999999999999999999999999999999986
No 88
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.93 E-value=2.9e-25 Score=127.73 Aligned_cols=107 Identities=31% Similarity=0.307 Sum_probs=95.1
Q ss_pred CChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhccCCC
Q psy8766 13 KRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEKDKT 92 (135)
Q Consensus 13 g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (135)
..+||+.|+..|+.+++++|++.|++++ .+..|.||||+|+..++.++++++. +.+.. ++..+..
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll-------~~g~~-------~~~~~~~ 66 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLL-------RAGVS-------RDARTKV 66 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHH-------TTTCC-------TTCCCTT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHH-------HcCCC-------CCCCCCC
Confidence 4689999999999999999999999886 5889999999999999866555544 34443 6778889
Q ss_pred CCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 93 GCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 93 ~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
|+||||+|+..++.+++++|+++|++++.+|..|.|||++|+
T Consensus 67 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 108 (153)
T 1awc_B 67 DRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWAT 108 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 999999999999999999999999999999999999999986
No 89
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.93 E-value=5.8e-25 Score=137.03 Aligned_cols=129 Identities=22% Similarity=0.236 Sum_probs=90.9
Q ss_pred CCCCcccccc--------------CCChHHHHHHHhCCHHHHHHHHH---cCCCccccccCCchHHHHHHHhCCC--chH
Q psy8766 2 TGADLNVLDK--------------EKRSPLLLAASRGGWKTVLTLVR---NKANILLKDINRRNILHLLVLNGGG--HIK 62 (135)
Q Consensus 2 ~g~~~n~~~~--------------~g~tpl~~a~~~~~~~~~~~Ll~---~g~~~~~~~~~g~t~l~~a~~~~~~--~~~ 62 (135)
+|+++|.++. .|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+..++. ...
T Consensus 123 ~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~ 202 (273)
T 2pnn_A 123 NGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNT 202 (273)
T ss_dssp TTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHH
T ss_pred CCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHH
Confidence 5888888886 79999999999999999999999 9999999999999999999998873 222
Q ss_pred HHHHHHHHHHhcCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCC-CeeecCCCCCCcc
Q psy8766 63 EFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGA-CINLKNNSNESPL 130 (135)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~-~~~~~~~~g~tpl 130 (135)
+++..+...++..+...+.....++..+..|+||||+|+..|+.+++++|+++|+ ++......+.+|.
T Consensus 203 ~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 203 KFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHEPECRHAAAHHHH 271 (273)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-------------
T ss_pred HHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCCchhhhhhhhhcc
Confidence 2223333344333322111011124588999999999999999999999999999 8888777776664
No 90
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.93 E-value=1.1e-25 Score=132.55 Aligned_cols=110 Identities=24% Similarity=0.291 Sum_probs=95.8
Q ss_pred cCCChHHHHHHHhCCHHHHHHHHHc-CCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhcc
Q psy8766 11 KEKRSPLLLAASRGGWKTVLTLVRN-KANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEK 89 (135)
Q Consensus 11 ~~g~tpl~~a~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (135)
.++.+|||.|+..|+.+++++|++. +.+++.++..|.||||+|+..++.++++++.. .+.. ++..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~-------~~~~ 68 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIM-------RGAR-------INVM 68 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-------TTCC-------TTCC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHH-------cCCC-------CCCc
Confidence 4678999999999999999999987 77899999999999999999998666555554 3433 6778
Q ss_pred CCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 90 DKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 90 ~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
+..|+||||+|+..++.+++++|+++|++++.+|..|.||||+|+
T Consensus 69 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~ 113 (179)
T 3f6q_A 69 NRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYAC 113 (179)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 889999999999999999999999999999999999999999986
No 91
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.93 E-value=1.9e-26 Score=141.44 Aligned_cols=119 Identities=17% Similarity=0.110 Sum_probs=101.5
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|+++|.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.++++++.. .+..
T Consensus 59 ~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~-------~ga~--- 128 (239)
T 1ycs_B 59 EVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVE-------SGAA--- 128 (239)
T ss_dssp TTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH-------TTCC---
T ss_pred cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC---
Confidence 688999999999999999999999999999999999999999999999999999998666555554 3443
Q ss_pred hhhhhhccCCCCC-cHHHHH--HhcCcHHHHHHHHHcCCCeeec---------CCCCCCcchhcc
Q psy8766 82 IQNLLNEKDKTGC-SPLHYA--SREGHIISLENLINLGACINLK---------NNSNESPLHLAA 134 (135)
Q Consensus 82 ~~~~~~~~~~~~~-t~l~~a--~~~~~~~~~~~ll~~g~~~~~~---------~~~g~tpl~~a~ 134 (135)
++..+..+. ||||+| +..|+.+++++|+++|++++.. +..+.+|.+++.
T Consensus 129 ----~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~ 189 (239)
T 1ycs_B 129 ----VFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPM 189 (239)
T ss_dssp ----TTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCB
T ss_pred ----cceecCCCCcchHHHHHHhhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCcccc
Confidence 666776666 999999 7889999999999998887665 555677776654
No 92
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=6.1e-25 Score=122.27 Aligned_cols=103 Identities=41% Similarity=0.578 Sum_probs=92.7
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|++++.++..|.||||+|+..++.+++++|++.|++++.++..|.||||+|+..++.++++++.. .+..
T Consensus 24 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~-------~g~~--- 93 (126)
T 1n0r_A 24 AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE-------AGAD--- 93 (126)
T ss_dssp HTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH-------TTCC---
T ss_pred cCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHH-------cCCC---
Confidence 478999999999999999999999999999999999999999999999999999998766666554 3333
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCC
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLGAC 118 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~ 118 (135)
++..+..|.|||++|+..++.+++++|+++|++
T Consensus 94 ----~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 94 ----VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp ----TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred ----CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 677888999999999999999999999999985
No 93
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.92 E-value=6.4e-25 Score=126.54 Aligned_cols=99 Identities=28% Similarity=0.317 Sum_probs=89.7
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|+++|.+|..|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.++++++... ..
T Consensus 57 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--------~~--- 125 (156)
T 1bd8_A 57 QGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE--------SD--- 125 (156)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--------SC---
T ss_pred CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc--------cC---
Confidence 5899999999999999999999999999999999999999999999999999999987766665543 22
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHc
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINL 115 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~ 115 (135)
++..+..|.|||++|+..++.+++++|+++
T Consensus 126 ----~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 126 ----LHRRDARGLTPLELALQRGAQDLVDILQGH 155 (156)
T ss_dssp ----TTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred ----CCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence 677889999999999999999999999864
No 94
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.92 E-value=3e-25 Score=148.43 Aligned_cols=110 Identities=16% Similarity=0.103 Sum_probs=91.9
Q ss_pred CCCCcccc------ccCCChHHHHHHH---hCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHH
Q psy8766 2 TGADLNVL------DKEKRSPLLLAAS---RGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVF 72 (135)
Q Consensus 2 ~g~~~n~~------~~~g~tpl~~a~~---~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~ 72 (135)
+|+|+|.+ +..|.||||+|+. .|+.+++++|++.|++++.+|..|.||||+|+..|+.+++++++
T Consensus 154 ~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll------ 227 (497)
T 3lvq_E 154 NGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLL------ 227 (497)
T ss_dssp TTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHH------
T ss_pred hcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHH------
Confidence 58899887 8899999999966 89999999999999999999999999999999999866555554
Q ss_pred hcCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCC
Q psy8766 73 LGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNS 125 (135)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~ 125 (135)
..+.. ++..+..|+||||+|+..|+.+++++|+++|++++.....
T Consensus 228 -~~ga~-------~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~h 272 (497)
T 3lvq_E 228 -KGRAL-------VGTVNEAGETALDIARKKHHKECEELLEQAQAGTFAFPLH 272 (497)
T ss_dssp -HTCCC-------CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC--------
T ss_pred -HcCCC-------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCCCcce
Confidence 44555 7889999999999999999999999999999999875433
No 95
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.91 E-value=1.3e-24 Score=136.01 Aligned_cols=99 Identities=20% Similarity=0.160 Sum_probs=87.7
Q ss_pred ccccccCCChHHHHHHHh---CCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhh
Q psy8766 6 LNVLDKEKRSPLLLAASR---GGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGI 82 (135)
Q Consensus 6 ~n~~~~~g~tpl~~a~~~---~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (135)
++..+..|.||||+|+.. ++.+++++|++.|++++.+|..|.||||+|+..|+.+++++++. .+..
T Consensus 162 l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~-------~gad---- 230 (278)
T 1dcq_A 162 LANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLR-------GKAS---- 230 (278)
T ss_dssp CSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH-------TTCC----
T ss_pred ccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC----
Confidence 445588999999999999 89999999999999999999999999999999998666555544 4444
Q ss_pred hhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCC
Q psy8766 83 QNLLNEKDKTGCSPLHYASREGHIISLENLINLGAC 118 (135)
Q Consensus 83 ~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~ 118 (135)
++..+..|.||||+|+..|+.+++++|+++|++
T Consensus 231 ---~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~ 263 (278)
T 1dcq_A 231 ---IEIANESGETPLDIAKRLKHEHCEELLTQALSG 263 (278)
T ss_dssp ---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred ---CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 788899999999999999999999999999874
No 96
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.91 E-value=6.4e-24 Score=135.79 Aligned_cols=117 Identities=26% Similarity=0.269 Sum_probs=90.0
Q ss_pred cCCChHHHHHHHhCCHHHHHHHHHcCCCcccccc-CCchHHHHHHHhCCCchHHHHHHHHHH------------------
Q psy8766 11 KEKRSPLLLAASRGGWKTVLTLVRNKANILLKDI-NRRNILHLLVLNGGGHIKEFAEEVAAV------------------ 71 (135)
Q Consensus 11 ~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~-~g~t~l~~a~~~~~~~~~~~~~~~~~~------------------ 71 (135)
.+|.||||.|+..|+.++|++|+++|++++.++. .|+||||+|+..|+.+++++++.....
T Consensus 23 ~~~~t~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~ 102 (337)
T 4g8k_A 23 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIA 102 (337)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred CCCChHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhc
Confidence 4567888888888888888888888888887764 478888888888887777776653211
Q ss_pred --------HhcCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeec----------CCCCCCcchhc
Q psy8766 72 --------FLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLK----------NNSNESPLHLA 133 (135)
Q Consensus 72 --------~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~----------~~~g~tpl~~a 133 (135)
+...+.. ++..+..|.||+|+|+..++.+++++|+++|++++.. +..|.|||++|
T Consensus 103 ~~~~~~~~~~~~~~~-------~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A 175 (337)
T 4g8k_A 103 GSVKLLKLFLSKGAD-------VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDA 175 (337)
T ss_dssp TCHHHHHHHHTTTCC-------TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHH
T ss_pred ccchhhHHhhhccch-------hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHH
Confidence 1111111 5678889999999999999999999999999988654 44688999998
Q ss_pred c
Q psy8766 134 A 134 (135)
Q Consensus 134 ~ 134 (135)
+
T Consensus 176 ~ 176 (337)
T 4g8k_A 176 A 176 (337)
T ss_dssp H
T ss_pred H
Confidence 6
No 97
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=7.1e-25 Score=141.57 Aligned_cols=109 Identities=20% Similarity=0.235 Sum_probs=84.3
Q ss_pred CCChHHHHHHHh-CCHHHHHHHHHcCCCccccc--cCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhc
Q psy8766 12 EKRSPLLLAASR-GGWKTVLTLVRNKANILLKD--INRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNE 88 (135)
Q Consensus 12 ~g~tpl~~a~~~-~~~~~~~~Ll~~g~~~~~~~--~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (135)
.+.|+||.|+.. ++.+++++|++.|++++..+ ..|.||||+|+..++.+++++++. .+.. ++.
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~-------~Gad-------vn~ 263 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQ-------NGAN-------VNQ 263 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHH-------TTCC-------TTC
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHH-------cCCC-------CCC
Confidence 445788888888 88888888888888888777 788888888888887555544443 3333 667
Q ss_pred cCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 89 KDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 89 ~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
.+..|+||||+|+..++.+++++|+++|++++.+|..|.|||++|+
T Consensus 264 ~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~ 309 (368)
T 3jue_A 264 ADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAM 309 (368)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHH
Confidence 7778888888888888888888888888888888888888888875
No 98
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.91 E-value=2.7e-24 Score=127.39 Aligned_cols=113 Identities=19% Similarity=0.160 Sum_probs=94.7
Q ss_pred CCCCccccccCCChHHHHHHHhCC------HHHHHHHHHcCCCccccccCCc-hHHHHHHHhCCCchHHHHHHHHHHHhc
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGG------WKTVLTLVRNKANILLKDINRR-NILHLLVLNGGGHIKEFAEEVAAVFLG 74 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~------~~~~~~Ll~~g~~~~~~~~~g~-t~l~~a~~~~~~~~~~~~~~~~~~~~~ 74 (135)
+|+|+|.+|..|+||||+|+..++ .+++++|++.|++++.+|..|. ||||+|+..+... .-...+...++.
T Consensus 64 ~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~--~~~~~iv~~Ll~ 141 (186)
T 3t8k_A 64 KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDE--NEMIPLYKLIFS 141 (186)
T ss_dssp TTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCH--HHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCCh--hhHHHHHHHHHH
Confidence 699999999999999999999987 6889999999999999999999 9999999854321 123345566676
Q ss_pred -CCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecC
Q psy8766 75 -EGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKN 123 (135)
Q Consensus 75 -~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~ 123 (135)
.+.. ++.++..|+||||+|+..++.+++++|.+.....+.++
T Consensus 142 ~~gad-------~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 142 QSGLQ-------LLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp STTCC-------TTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred hcCCC-------CcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 6766 88899999999999999999999999998755555443
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.90 E-value=5.3e-24 Score=134.51 Aligned_cols=108 Identities=23% Similarity=0.255 Sum_probs=95.0
Q ss_pred CChHHHHHHHhCCHHHHHHHHHcCCCccc------cccCCchHHHHHHHh---CCCchHHHHHHHHHHHhcCCcchhhhh
Q psy8766 13 KRSPLLLAASRGGWKTVLTLVRNKANILL------KDINRRNILHLLVLN---GGGHIKEFAEEVAAVFLGEGEASQGIQ 83 (135)
Q Consensus 13 g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~l~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (135)
..++|+.|+..++.+.++.|++.|++++. .+..|.||||+|+.. ++.+++++++. .+..
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~-------~gad----- 218 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ-------NGGH----- 218 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHH-------HSSC-----
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHh-------cCCC-----
Confidence 45789999999999999999999999988 689999999999997 55445444444 3433
Q ss_pred hhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 84 NLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 84 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+
T Consensus 219 --vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~ 267 (301)
T 2b0o_E 219 --LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIAR 267 (301)
T ss_dssp --TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHH
T ss_pred --CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 7788899999999999999999999999999999999999999999986
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=1e-24 Score=132.32 Aligned_cols=112 Identities=17% Similarity=0.134 Sum_probs=86.4
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHc-CCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRN-KANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQ 80 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (135)
.|+++|.+|..|.||||+|+..|+.+++++|++. |++++.+|..|.||||+|+..|+.+++++++.. +..
T Consensus 95 ~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-------ga~-- 165 (222)
T 3ehr_A 95 NRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAK-------GAR-- 165 (222)
T ss_dssp TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHH-------TCC--
T ss_pred CCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc-------CCC--
Confidence 5899999999999999999999999999999998 999999999999999999999987766666654 333
Q ss_pred hhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCC
Q psy8766 81 GIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNE 127 (135)
Q Consensus 81 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~ 127 (135)
++..+..|+|||++|+..+..++++.|++.|+.....+..+.
T Consensus 166 -----~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 166 -----TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDY 207 (222)
T ss_dssp -----SCCCCTTSCCHHHHCCSHHHHHHHC-----------------
T ss_pred -----CccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhhh
Confidence 677889999999999999999999999999999887766543
No 101
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.90 E-value=8.1e-24 Score=136.66 Aligned_cols=118 Identities=23% Similarity=0.263 Sum_probs=90.7
Q ss_pred CCCCccccc--cCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcch
Q psy8766 2 TGADLNVLD--KEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEAS 79 (135)
Q Consensus 2 ~g~~~n~~~--~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (135)
+|+|+|..+ ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++++. .+..
T Consensus 222 ~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~-------~Gad- 293 (368)
T 3jue_A 222 HGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLK-------RGAD- 293 (368)
T ss_dssp TTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-------TTCC-
T ss_pred cCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHH-------CcCC-
Confidence 689999998 899999999999999999999999999999999999999999999998666555544 4444
Q ss_pred hhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcC---CCeeecCCCCCCcchhc
Q psy8766 80 QGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLG---ACINLKNNSNESPLHLA 133 (135)
Q Consensus 80 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g---~~~~~~~~~g~tpl~~a 133 (135)
++..+..|.||||+|+..++.+++++|+..+ .+....+..+.|++.++
T Consensus 294 ------~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~ 344 (368)
T 3jue_A 294 ------LGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIF 344 (368)
T ss_dssp ------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-------------------
T ss_pred ------CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHH
Confidence 7888999999999999999999999999765 33344455667776654
No 102
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.90 E-value=9.4e-24 Score=141.24 Aligned_cols=107 Identities=23% Similarity=0.262 Sum_probs=95.1
Q ss_pred ChHHHHHHHhCCHHHHHHHHHcCCCcccc------ccCCchHHHHHHH---hCCCchHHHHHHHHHHHhcCCcchhhhhh
Q psy8766 14 RSPLLLAASRGGWKTVLTLVRNKANILLK------DINRRNILHLLVL---NGGGHIKEFAEEVAAVFLGEGEASQGIQN 84 (135)
Q Consensus 14 ~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~------~~~g~t~l~~a~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (135)
.+.||.|+..|+.+.++.|++.|++++.. +..|.||||+|+. .|+.+++++++. .+..
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~-------~ga~------ 199 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ-------NGGH------ 199 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHH-------HSCC------
T ss_pred HHHHHHHHhccCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHH-------cCCC------
Confidence 46799999999999999999999999887 8899999999976 676555555544 3444
Q ss_pred hhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 85 LLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 85 ~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|+||||+|+..|+.+++++|+++|++++.+|..|+|||++|+
T Consensus 200 -vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 248 (497)
T 3lvq_E 200 -LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIAR 248 (497)
T ss_dssp -TTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHHH
T ss_pred -CCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 7889999999999999999999999999999999999999999999986
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.90 E-value=1.5e-23 Score=131.18 Aligned_cols=108 Identities=24% Similarity=0.299 Sum_probs=93.8
Q ss_pred CChHHHHHHHhCCHHHHHHHHHcCCCcc------ccccCCchHHHHHHHh---CCCchHHHHHHHHHHHhcCCcchhhhh
Q psy8766 13 KRSPLLLAASRGGWKTVLTLVRNKANIL------LKDINRRNILHLLVLN---GGGHIKEFAEEVAAVFLGEGEASQGIQ 83 (135)
Q Consensus 13 g~tpl~~a~~~~~~~~~~~Ll~~g~~~~------~~~~~g~t~l~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (135)
..++|+.|+..++.+.++.+++.|++++ ..+..|.||||+|+.. ++.+++++++. .+..
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~-------~ga~----- 197 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ-------NSGN----- 197 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHH-------HCSC-----
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHH-------CCCC-----
Confidence 3578999999999999999999999854 4488999999999999 66555555444 3444
Q ss_pred hhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCCCCCCcchhcc
Q psy8766 84 NLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134 (135)
Q Consensus 84 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~ 134 (135)
++..+..|+||||+|+..|+.+++++|+++|++++.+|..|.|||++|+
T Consensus 198 --in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 246 (278)
T 1dcq_A 198 --LDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 246 (278)
T ss_dssp --TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred --ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHH
Confidence 7888999999999999999999999999999999999999999999986
No 104
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=2.2e-23 Score=115.85 Aligned_cols=92 Identities=21% Similarity=0.182 Sum_probs=78.8
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|+++|.+|..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..++.++++++.. .+..
T Consensus 29 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~-------~ga~--- 98 (123)
T 3aaa_C 29 KGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLS-------KGAD--- 98 (123)
T ss_dssp TTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHH-------TTCC---
T ss_pred cCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC---
Confidence 588999999999999999999999999999999999999999999999999999998666555554 3433
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHH
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHII 107 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~ 107 (135)
++..+..|+||+++|...+..+
T Consensus 99 ----~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 99 ----KTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp ----TTCCCTTSCCHHHHCCCHHHHH
T ss_pred ----CCCcCCCCCCHHHHhCCHHHHH
Confidence 6778899999999995444333
No 105
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.88 E-value=2e-22 Score=119.03 Aligned_cols=87 Identities=24% Similarity=0.291 Sum_probs=76.2
Q ss_pred CCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccc-cCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKD-INRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 3 g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
|+++|.+|..|.||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..++.++++++... +..
T Consensus 66 ~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-------ga~--- 135 (183)
T 3deo_A 66 DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL-------GAD--- 135 (183)
T ss_dssp TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHH-------TCC---
T ss_pred cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHc-------CCC---
Confidence 78999999999999999999999999999999999999998 8999999999999987777666654 333
Q ss_pred hhhhhhccCCCCCcHHHHHHhc
Q psy8766 82 IQNLLNEKDKTGCSPLHYASRE 103 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~ 103 (135)
++..+..|+||||+|+..
T Consensus 136 ----~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 136 ----IEVEDERGLTALELAREI 153 (183)
T ss_dssp ----TTCCCTTSCCHHHHHHHH
T ss_pred ----CcCCCCCCCCHHHHHHHh
Confidence 677888888888888765
No 106
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.88 E-value=8.9e-24 Score=119.45 Aligned_cols=101 Identities=26% Similarity=0.233 Sum_probs=86.6
Q ss_pred CCCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 2 TGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 2 ~g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
+|++++.+|..|.||||+|+..++.+++++|++.|++++.+|..|.||||+|+..++.++++++.. .+..
T Consensus 32 ~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-------~ga~--- 101 (137)
T 3c5r_A 32 NGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLS-------YGAS--- 101 (137)
T ss_dssp TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHH-------TTCC---
T ss_pred cCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC---
Confidence 588999999999999999999999999999999999999999999999999999998666665554 3433
Q ss_pred hhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcC
Q psy8766 82 IQNLLNEKDKTGCSPLHYASREGHIISLENLINLG 116 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g 116 (135)
++..+..|.||+++|+..+..+++++|.+.+
T Consensus 102 ----~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~ 132 (137)
T 3c5r_A 102 ----RNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132 (137)
T ss_dssp ----TTCCCTTSCCGGGGCCCHHHHHHHSCC----
T ss_pred ----CCCCCCCCCCHHHHHhhccHHHHHhhccccc
Confidence 6788999999999999999988887776543
No 107
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.88 E-value=1.4e-22 Score=110.55 Aligned_cols=93 Identities=27% Similarity=0.258 Sum_probs=78.7
Q ss_pred ccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhh
Q psy8766 6 LNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNL 85 (135)
Q Consensus 6 ~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (135)
++..+.+|.||||+|+..|+.+++++|++.|++++.+|..|.||||+|+..++.+++++++. .+..
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~-------~ga~------- 82 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLE-------AGAD------- 82 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH-------TTCC-------
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHH-------cCCC-------
Confidence 34567899999999999999999999999999999999999999999999998666555544 3433
Q ss_pred hhccCCCCCcHHHHHHhcCcHHHHHHH
Q psy8766 86 LNEKDKTGCSPLHYASREGHIISLENL 112 (135)
Q Consensus 86 ~~~~~~~~~t~l~~a~~~~~~~~~~~l 112 (135)
++..+..|+||||+|+..++.+++++|
T Consensus 83 ~~~~d~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 83 VXAQDKFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ccccccCCCcHHHHHHHcCCHHHHHHh
Confidence 677889999999999999999999886
No 108
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=1.2e-22 Score=124.85 Aligned_cols=102 Identities=24% Similarity=0.236 Sum_probs=85.0
Q ss_pred CCCccccccCCChHHHHHHHhCCHHHHHHHHHcCCCccccc-cCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhh
Q psy8766 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKD-INRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQG 81 (135)
Q Consensus 3 g~~~n~~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~~~~~-~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (135)
|+++|.+|..|.||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+..|+.+++++++.. +..
T Consensus 67 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-------ga~--- 136 (244)
T 3ui2_A 67 DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL-------GAD--- 136 (244)
T ss_dssp TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHT-------TCC---
T ss_pred CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHC-------CCC---
Confidence 78999999999999999999999999999999999999998 8899999999999987766665543 333
Q ss_pred hhhhhhccCCCCCcHHHHHH----------------hcCcHHHHHHHHHcCCC
Q psy8766 82 IQNLLNEKDKTGCSPLHYAS----------------REGHIISLENLINLGAC 118 (135)
Q Consensus 82 ~~~~~~~~~~~~~t~l~~a~----------------~~~~~~~~~~ll~~g~~ 118 (135)
++..+..|+||||+|+ ..|+.+++++|++.+.+
T Consensus 137 ----~~~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 137 ----IEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp ----TTCCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred ----CCCCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 5556666666666665 67889999999986443
No 109
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.86 E-value=4.2e-23 Score=131.73 Aligned_cols=102 Identities=18% Similarity=0.126 Sum_probs=73.6
Q ss_pred HHHHhCCHHHHHHHHHcCCCccc-cccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhccCCCCCcHH
Q psy8766 19 LAASRGGWKTVLTLVRNKANILL-KDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPL 97 (135)
Q Consensus 19 ~a~~~~~~~~~~~Ll~~g~~~~~-~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l 97 (135)
+|+..+..++++.|++.|++++. +|..|.||||+|+..|+.++++++++ .+.. ++..+..|+|||
T Consensus 103 ~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~-------~Gad-------~n~~d~~g~TpL 168 (327)
T 1sw6_A 103 VSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVK-------HGSN-------RLYGDNMGESCL 168 (327)
T ss_dssp -CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHH-------TTCC-------TTBCCTTCCCHH
T ss_pred HHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHH-------cCCC-------CCCcCCCCCCHH
Confidence 33444444555566666677777 78888888888888887655555544 3433 677788888888
Q ss_pred HHHHhcCc---HHHHHHHHHcC-CCeeecCCCCCCcchhcc
Q psy8766 98 HYASREGH---IISLENLINLG-ACINLKNNSNESPLHLAA 134 (135)
Q Consensus 98 ~~a~~~~~---~~~~~~ll~~g-~~~~~~~~~g~tpl~~a~ 134 (135)
|+|+..|+ .++++.|++.+ ++++.+|..|+||||+|+
T Consensus 169 h~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~ 209 (327)
T 1sw6_A 169 VKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHII 209 (327)
T ss_dssp HHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHH
T ss_pred HHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHH
Confidence 88888887 57777777765 678888888888888875
No 110
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.84 E-value=5.4e-23 Score=133.22 Aligned_cols=114 Identities=18% Similarity=0.135 Sum_probs=85.6
Q ss_pred cccCCChHHHHHHHhCCHHHHHHHHHcCCCc---cccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhh
Q psy8766 9 LDKEKRSPLLLAASRGGWKTVLTLVRNKANI---LLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNL 85 (135)
Q Consensus 9 ~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~---~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (135)
++.+++||||+|+..|+.+++++|++.|+.. ...+..|.||||+|+..|+.++++++...... .... .
T Consensus 88 ~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad-------~~~~--~ 158 (376)
T 2aja_A 88 KGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPT-------EIMA--M 158 (376)
T ss_dssp HTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTT-------THHH--H
T ss_pred cCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCC-------cccc--c
Confidence 3455679999999999999999999998732 24456788999999999998777777654310 0000 0
Q ss_pred hhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeee--cCCCCCCcchhcc
Q psy8766 86 LNEKDKTGCSPLHYASREGHIISLENLINLGACINL--KNNSNESPLHLAA 134 (135)
Q Consensus 86 ~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~--~~~~g~tpl~~a~ 134 (135)
++..+ .||||+|+..|+.+++++|+++|++++. .|..|.|||++|+
T Consensus 159 i~~~~---~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa 206 (376)
T 2aja_A 159 IQAEN---YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAA 206 (376)
T ss_dssp HSHHH---HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHH
T ss_pred cCCCC---CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCHHHHHH
Confidence 22222 8999999999999999999999999887 8888999999987
No 111
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.82 E-value=4.7e-21 Score=101.52 Aligned_cols=76 Identities=42% Similarity=0.645 Sum_probs=65.4
Q ss_pred CCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCeeecCC
Q psy8766 45 NRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNN 124 (135)
Q Consensus 45 ~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~~~~~ 124 (135)
+|.||||+|+..++.++++++.. .+.. ++..+..|+||||+|+..++.+++++|+++|++++.+|.
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~-------~g~~-------~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~ 66 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLE-------AGAD-------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDK 66 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHH-------TTCC-------TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred CCCcHHHHHHHcCCHHHHHHHHH-------cCCC-------CcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCC
Confidence 48899999999998666555543 3443 778889999999999999999999999999999999999
Q ss_pred CCCCcchhcc
Q psy8766 125 SNESPLHLAA 134 (135)
Q Consensus 125 ~g~tpl~~a~ 134 (135)
.|+|||++|+
T Consensus 67 ~g~t~l~~A~ 76 (93)
T 1n0q_A 67 NGRTPLHLAA 76 (93)
T ss_dssp TSCCHHHHHH
T ss_pred CCCCHHHHHH
Confidence 9999999986
No 112
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.81 E-value=4.2e-22 Score=129.04 Aligned_cols=105 Identities=15% Similarity=0.131 Sum_probs=81.5
Q ss_pred cccCCChHHHHHHHhCCHHHHHHHHHcCCCc---cccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhh
Q psy8766 9 LDKEKRSPLLLAASRGGWKTVLTLVRNKANI---LLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNL 85 (135)
Q Consensus 9 ~~~~g~tpl~~a~~~~~~~~~~~Ll~~g~~~---~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (135)
.+..|.||||+|+..|+.+++++|+++|+++ +..+.. .||||+|+..|+.++++++... +..
T Consensus 124 ~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~-------ga~------- 188 (376)
T 2aja_A 124 IQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCEL-------APT------- 188 (376)
T ss_dssp -CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHS-------CGG-------
T ss_pred hccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHc-------CCc-------
Confidence 3456789999999999999999999999762 333333 9999999999997777666653 222
Q ss_pred hhc--cCCCCCcHHHHHH-hcCcHHHHHHHHHcCCCeeecCCCCCCcchhccC
Q psy8766 86 LNE--KDKTGCSPLHYAS-REGHIISLENLINLGACINLKNNSNESPLHLAAR 135 (135)
Q Consensus 86 ~~~--~~~~~~t~l~~a~-~~~~~~~~~~ll~~g~~~~~~~~~g~tpl~~a~~ 135 (135)
++. .+..|.||||+|+ ..|+.+++++|++.|++ |.||+++|++
T Consensus 189 ~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~-------~~taL~~Aa~ 234 (376)
T 2aja_A 189 EATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFE 234 (376)
T ss_dssp GHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH-------HHHHHHCTTT
T ss_pred cchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc-------cchHHHHHHH
Confidence 232 4556889999999 99999999999987642 7888888864
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.76 E-value=2.7e-19 Score=97.49 Aligned_cols=82 Identities=21% Similarity=0.299 Sum_probs=67.7
Q ss_pred ccccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCC
Q psy8766 39 ILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGAC 118 (135)
Q Consensus 39 ~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~ 118 (135)
+...+..|.||||+|+..++.+++++++. .+.. ++..+..|+||||+|+..++.+++++|+++|++
T Consensus 17 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-------~g~~-------i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~ 82 (110)
T 2zgd_A 17 GSHMGSDLGKKLLEAARAGQDDEVRILMA-------NGAD-------VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD 82 (110)
T ss_dssp -----CCHHHHHHHHHHHTCHHHHHHHHH-------TTCC-------TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred ccccCCccchHHHHHHHcCCHHHHHHHHH-------cCCC-------CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 34457899999999999998666555543 3333 677889999999999999999999999999999
Q ss_pred eeecCCCCCCcchhcc
Q psy8766 119 INLKNNSNESPLHLAA 134 (135)
Q Consensus 119 ~~~~~~~g~tpl~~a~ 134 (135)
++.+|..|.|||++|+
T Consensus 83 ~~~~d~~g~tpl~~A~ 98 (110)
T 2zgd_A 83 VXAQDKFGKTAFDISI 98 (110)
T ss_dssp TTCCCTTSCCHHHHHH
T ss_pred ccccccCCCcHHHHHH
Confidence 9999999999999986
No 114
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.75 E-value=3.2e-18 Score=93.78 Aligned_cols=81 Identities=28% Similarity=0.462 Sum_probs=69.7
Q ss_pred ccccCCchHHHHHHHhCCCchHHHHHHHHHHHhcCCcchhhhhhhhhccCCCCCcHHHHHHhcCcHHHHHHHHHcCCCee
Q psy8766 41 LKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACIN 120 (135)
Q Consensus 41 ~~~~~g~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~ll~~g~~~~ 120 (135)
.+|..|.||||+|+..++.++++ .++..+.. ++..+..|+||||+|+..++.+++++|+++|++++
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~-------~Ll~~g~~-------~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~ 69 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVK-------KLLSKGAD-------VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVN 69 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHH-------HHTTTTCC-------SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHH-------HHHHcCCC-------CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCc
Confidence 46889999999999999754444 44444444 67788999999999999999999999999999999
Q ss_pred ecCCCCCCcchhccC
Q psy8766 121 LKNNSNESPLHLAAR 135 (135)
Q Consensus 121 ~~~~~g~tpl~~a~~ 135 (135)
.+|..|.|||++|++
T Consensus 70 ~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 70 ARSKDGNTPEHLAKK 84 (115)
T ss_dssp CCCTTCCCTTHHHHT
T ss_pred ccCCCCCCHHHHHHH
Confidence 999999999999874
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=67.52 E-value=5.9 Score=16.64 Aligned_cols=17 Identities=35% Similarity=0.280 Sum_probs=13.7
Q ss_pred HHHHHHhCCHHHHHHHH
Q psy8766 17 LLLAASRGGWKTVLTLV 33 (135)
Q Consensus 17 l~~a~~~~~~~~~~~Ll 33 (135)
+..||..|+++.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 56788999999888764
No 116
>3r3t_A 30S ribosomal protein S6; structural genomics, center for structural genomics of infec diseases, csgid, beta-barrel, cytosol; 2.30A {Bacillus anthracis}
Probab=23.39 E-value=83 Score=16.13 Aligned_cols=26 Identities=23% Similarity=0.048 Sum_probs=17.5
Q ss_pred HHHHHHHcCCCeeecCCCCCCcchhc
Q psy8766 108 SLENLINLGACINLKNNSNESPLHLA 133 (135)
Q Consensus 108 ~~~~ll~~g~~~~~~~~~g~tpl~~a 133 (135)
+.+.+.+.|+.+...+.+|...|-+-
T Consensus 29 ~~~~i~~~gg~i~~~e~wG~R~LAY~ 54 (99)
T 3r3t_A 29 FAGVLTNNGAEIINTKEWGKRRLAYE 54 (99)
T ss_dssp HHHHHHTTTCCCCCCCCCCSCCCCCC
T ss_pred HHHHHHHCCCEEEEEEEeeccccCcC
Confidence 33455567888877888887766543
Done!