RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8766
(135 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 68.8 bits (167), Expect = 2e-15
Identities = 35/152 (23%), Positives = 58/152 (38%), Gaps = 19/152 (12%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIK 62
GA NV + + +PL +AA G + L++NKA + K + + LH G ++
Sbjct: 23 GASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMV 82
Query: 63 EFAEEVAA-------------------VFLGEGEASQGIQNLLNEKDKTGCSPLHYASRE 103
+ E A + A + K G +PLH A++
Sbjct: 83 KLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKY 142
Query: 104 GHIISLENLINLGACINLKNNSNESPLHLAAR 135
G + E L+ A N + +PLH+A
Sbjct: 143 GKVRVAELLLERDAHPNAAGKNGLTPLHVAVH 174
Score = 63.5 bits (153), Expect = 2e-13
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 14/129 (10%)
Query: 7 NVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAE 66
N+ +K +PL L A G L+++ + LH+ G + +F
Sbjct: 258 NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKF-- 315
Query: 67 EVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSN 126
Q +N K K G SPLH A+++GH + L+ GA N ++
Sbjct: 316 ------------LLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDG 363
Query: 127 ESPLHLAAR 135
+PL +A R
Sbjct: 364 TTPLAIAKR 372
Score = 55.0 bits (131), Expect = 2e-10
Identities = 31/133 (23%), Positives = 47/133 (35%), Gaps = 14/133 (10%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIK 62
A N K +PL +A V L+ + N LH+ +
Sbjct: 155 DAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVA 214
Query: 63 EFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLK 122
+ N + G +PLH A++EGH + L++ A NL
Sbjct: 215 RSLLQ--------------YGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLG 260
Query: 123 NNSNESPLHLAAR 135
N S +PLHL A+
Sbjct: 261 NKSGLTPLHLVAQ 273
Score = 53.1 bits (126), Expect = 8e-10
Identities = 28/135 (20%), Positives = 50/135 (37%), Gaps = 14/135 (10%)
Query: 1 MTGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGH 60
A + K+ +PL +AA G + L+ A+ N LH+ V +
Sbjct: 120 EKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLD 179
Query: 61 IKEFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACIN 120
I + + G +PLH A+++ + +L+ G N
Sbjct: 180 IVKLLLPRGGS--------------PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSAN 225
Query: 121 LKNNSNESPLHLAAR 135
++ +PLHLAA+
Sbjct: 226 AESVQGVTPLHLAAQ 240
Score = 52.7 bits (125), Expect = 1e-09
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 14/118 (11%)
Query: 16 PLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGE 75
PL +A+ G V L++ A+ + ++ LH+ G EVA L
Sbjct: 3 PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAG-------HTEVAKYLLQN 55
Query: 76 GEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLA 133
+N K K +PLH A+R GH ++ L+ A NL + +PLH+A
Sbjct: 56 KAK-------VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIA 106
Score = 51.9 bits (123), Expect = 2e-09
Identities = 33/149 (22%), Positives = 51/149 (34%), Gaps = 19/149 (12%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIK 62
A +N K+ ++PL AA G V L+ N AN L LH+ G
Sbjct: 56 KAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETV 115
Query: 63 EFAEEVAAVFLGEGEASQG-------------IQNLL------NEKDKTGCSPLHYASRE 103
E A + + LL N K G +PLH A
Sbjct: 116 LALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHH 175
Query: 104 GHIISLENLINLGACINLKNNSNESPLHL 132
++ ++ L+ G + + +PLH+
Sbjct: 176 NNLDIVKLLLPRGGSPHSPAWNGYTPLHI 204
Score = 49.2 bits (116), Expect = 2e-08
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 96 PLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135
PLH AS GH+ ++NL+ GA N+ N E+PLH+AAR
Sbjct: 3 PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAAR 42
Score = 45.0 bits (105), Expect = 5e-07
Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 17/129 (13%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIK 62
G ++ + +PL +A+ G K V L++++A++ K + LH G
Sbjct: 287 GVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQG----- 341
Query: 63 EFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGH---IISLENLINLGACI 119
++ + L G AS NE G +PL A R G+ L+ + + + +
Sbjct: 342 --HTDIVTLLLKNG-AS------PNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFV 392
Query: 120 NLKNNSNES 128
+ + S
Sbjct: 393 LVSDKHRMS 401
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 64.2 bits (155), Expect = 5e-14
Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 14/135 (10%)
Query: 1 MTGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGH 60
GA +N +++ +PL AAS+ + + L+ AN KD +H G
Sbjct: 91 GKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLK 150
Query: 61 IKEFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACIN 120
+ + N +D G +PLH A E + + L++ GA I
Sbjct: 151 MIHIL--------------LYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIY 196
Query: 121 LKNNSNESPLHLAAR 135
++N ++PL +A
Sbjct: 197 IENKEEKTPLQVAKG 211
Score = 51.5 bits (122), Expect = 2e-09
Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 14/129 (10%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIK 62
+ D++ R+ L A S G + V L++ + KD + LH+ G I
Sbjct: 27 KSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIV 86
Query: 63 EFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLK 122
+ A +N ++ GC+PLHYA+ + L+ GA + K
Sbjct: 87 KALLGKGAQ--------------VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAK 132
Query: 123 NNSNESPLH 131
++ + +H
Sbjct: 133 DHYEATAMH 141
Score = 33.8 bits (76), Expect = 0.003
Identities = 31/120 (25%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
Query: 17 LLLAASRGGWKTV-LTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGE 75
+ A G + + +++ +K+ D + R LH G I EF
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEF----------- 55
Query: 76 GEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135
+ +N+KD G SPLH A+ G ++ L+ GA +N N + +PLH AA
Sbjct: 56 ---LLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAAS 112
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 64.7 bits (156), Expect = 5e-14
Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 2/131 (1%)
Query: 6 LNVLDKEKRSPLLLAASRGGWKTVLTLVRN--KANILLKDINRRNILHLLVLNGGGHIKE 63
L + D R+ L G + + + + +
Sbjct: 170 LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND 229
Query: 64 FAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKN 123
E L + I N+LN +D G + L+ A+R G+I ++ L++ GA + N
Sbjct: 230 KNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIAN 289
Query: 124 NSNESPLHLAA 134
S P+ A
Sbjct: 290 KSGLRPVDFGA 300
Score = 42.3 bits (98), Expect = 4e-06
Identities = 26/140 (18%), Positives = 51/140 (36%), Gaps = 8/140 (5%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRN----KANILLKDINRRNILHLLVLNGG 58
G++ D S L+ A T ++L+D R ILH +++ G
Sbjct: 130 GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSG 189
Query: 59 GHIKEFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLIN---L 115
A + L + + + S + + E LENL +
Sbjct: 190 MTGCSAAAKYYLDILMGWIVKKQNRPI-QSGTNEKESKPNDKNGERKDSILENLDLKWII 248
Query: 116 GACINLKNNSNESPLHLAAR 135
+N ++++ ++ L++AAR
Sbjct: 249 ANMLNAQDSNGDTCLNIAAR 268
Score = 42.0 bits (97), Expect = 5e-06
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 90 DKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLA 133
D+ G +PLH+ + ++ +++L+ G+ +N ES L A
Sbjct: 104 DEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKA 147
Score = 33.9 bits (76), Expect = 0.003
Identities = 10/49 (20%), Positives = 18/49 (36%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILH 51
LN D + L +AA G V L+ A+ + + + +
Sbjct: 249 ANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVD 297
Score = 23.9 bits (50), Expect = 9.2
Identities = 6/19 (31%), Positives = 9/19 (47%)
Query: 3 GADLNVLDKEKRSPLLLAA 21
GAD + +K P+ A
Sbjct: 282 GADPFIANKSGLRPVDFGA 300
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 55.7 bits (133), Expect = 8e-11
Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 12/131 (9%)
Query: 7 NVLDKEKRSPLLLAASRGGWKTVLTLV-RNKANILLKDINRRNILHLLVLNGGGHIKEFA 65
L K + L+ AA +G + + L+ A++ D RN L +L+
Sbjct: 142 ERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLS---SDDSDV 198
Query: 66 EEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLI-NLGACINLKNN 124
E + + L G +N + + G +PL A + H+ ++ L+ IN ++
Sbjct: 199 EAITHLLLDHGAD-------VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS 251
Query: 125 SNESPLHLAAR 135
++ L LA
Sbjct: 252 DGKTALLLAVE 262
Score = 51.1 bits (121), Expect = 4e-09
Identities = 24/125 (19%), Positives = 41/125 (32%), Gaps = 17/125 (13%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGWKTVL----TLVRNKANILLKDINRRNILHLLVLNGG 58
GAD+N D R+ L+ A V L+ + A++ ++ + L L V
Sbjct: 172 GADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKK- 230
Query: 59 GHIKEFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGAC 118
+ L + +N+ D G + L A E L GA
Sbjct: 231 ------HLGLVQRLLEQEHIE------INDTDSDGKTALLLAVELKLKKIAELLCKRGAS 278
Query: 119 INLKN 123
+ +
Sbjct: 279 TDCGD 283
Score = 40.3 bits (93), Expect = 2e-05
Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 95 SPLHYASREGHIISLENLINLGACINLKNNSN-ESPLHLAAR 135
L A + + ++ L+ GA +N + +PLH A +
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQ 48
Score = 39.9 bits (92), Expect = 3e-05
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDI 44
++N D + ++ LLLA K L + A+ D+
Sbjct: 243 HIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284
Score = 28.8 bits (63), Expect = 0.16
Identities = 27/154 (17%), Positives = 45/154 (29%), Gaps = 30/154 (19%)
Query: 12 EKRSPLLLAASRGGWKTVLTLVRNKANILLKD-INRRNILHLLVLNG------------- 57
E L+ A V L+ AN+ ++ LH V
Sbjct: 4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63
Query: 58 ---GGHIKEFAEEVAAVFLGEGEASQGIQN---LLNEKDKTGCSPLHYASREGHIISLEN 111
+ A G + + + +NE D G + A+ G + +L+
Sbjct: 64 DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123
Query: 112 LINLGACINLKN----------NSNESPLHLAAR 135
L GA +NL+ + L AA
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 55.5 bits (132), Expect = 1e-10
Identities = 13/47 (27%), Positives = 25/47 (53%)
Query: 89 KDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135
+D+ G +P+ A++EG I + LI GA + + ++ + LA
Sbjct: 217 QDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQA 263
Score = 40.5 bits (93), Expect = 2e-05
Identities = 14/64 (21%), Positives = 31/64 (48%)
Query: 1 MTGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGH 60
G++ + D++ ++P++LAA G + V+ L++ A++ D L N +
Sbjct: 209 EKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHN 268
Query: 61 IKEF 64
I +
Sbjct: 269 IVDI 272
Score = 37.8 bits (86), Expect = 2e-04
Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 9/59 (15%)
Query: 82 IQNLLNEKD-KTGCSPLHYASREGHIISLENLINL--------GACINLKNNSNESPLH 131
+ +N D + + LH+ + E+LI GA +N + +PL
Sbjct: 21 TRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLM 79
Score = 33.6 bits (75), Expect = 0.004
Identities = 15/85 (17%), Positives = 27/85 (31%), Gaps = 6/85 (7%)
Query: 15 SPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLG 74
SP+ L G + + ++ ++ + R +LH + N E A
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECI 61
Query: 75 EGEASQGIQNLLNEKDKTGCSPLHY 99
A +N D +PL
Sbjct: 62 AAGAD------VNAMDCDENTPLML 80
Score = 30.5 bits (67), Expect = 0.045
Identities = 7/32 (21%), Positives = 11/32 (34%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVR 34
GA + +D + LA + V R
Sbjct: 244 GASVEAVDATDHTARQLAQANNHHNIVDIFDR 275
Score = 29.7 bits (65), Expect = 0.080
Identities = 9/42 (21%), Positives = 13/42 (30%), Gaps = 2/42 (4%)
Query: 95 SPLH-YASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135
SP+ + G E + I N + LH A
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESVNII-DPRHNRTVLHWIAS 42
Score = 29.7 bits (65), Expect = 0.100
Identities = 11/50 (22%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 87 NEKDKTGCSPLHYASREGHIISLENLIN-LGACINLKNNSNESPLHLAAR 135
+ + G + LHYA++ ++ ++ L+ G+ + ++ ++P+ LAA+
Sbjct: 181 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQ 230
Score = 29.3 bits (64), Expect = 0.12
Identities = 10/49 (20%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 4 ADLNVLD-KEKRSPLLLAASRGGWKTVLTLVRNKANILLK---DINRRN 48
+N++D + R+ L AS + L+ ++A + D+N +
Sbjct: 23 ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMD 71
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 52.8 bits (125), Expect = 1e-09
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 86 LNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135
+N KD G +PLH A+ G + L+ + N ++ +A
Sbjct: 225 VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE 274
Score = 41.6 bits (96), Expect = 8e-06
Identities = 13/67 (19%), Positives = 29/67 (43%)
Query: 1 MTGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGH 60
D+N+ D + +PL AA G + LV N ++ + + + + G+
Sbjct: 220 QARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGY 279
Query: 61 IKEFAEE 67
++E ++
Sbjct: 280 LEELQKK 286
Score = 41.6 bits (96), Expect = 8e-06
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 86 LNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135
K+G + LH A+ +G+ L+ LI +N+K+ +PLH AA
Sbjct: 192 DVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAH 241
Score = 38.9 bits (89), Expect = 7e-05
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 95 SPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAA 134
+ A G + L+ GA IN N + LH A
Sbjct: 42 AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQAC 81
Score = 38.9 bits (89), Expect = 7e-05
Identities = 20/112 (17%), Positives = 42/112 (37%), Gaps = 16/112 (14%)
Query: 6 LNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFA 65
K + L +AA++G + + L++ + ++ +KD + LH G
Sbjct: 192 DVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWG-------K 244
Query: 66 EEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASRE--GHIISLENLINL 115
EE + + + +K G + A + G++ L+ NL
Sbjct: 245 EEACRILV-----ENLCD--MEAVNKVGQTAFDVADEDILGYLEELQKKQNL 289
Score = 31.2 bits (69), Expect = 0.027
Identities = 12/56 (21%), Positives = 25/56 (44%)
Query: 9 LDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEF 64
+ + + L A S G + VL L+ A+I +++ LH ++ + +F
Sbjct: 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKF 91
Score = 25.8 bits (55), Expect = 1.8
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 86 LNEKDKTGCSPLHYASREGHI 106
+N + G + LH A + ++
Sbjct: 66 INYANVDGLTALHQACIDDNV 86
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 51.2 bits (121), Expect = 2e-09
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 85 LLNEKDKTGCSPLHYASREGHIISLENLINLGA---CINLKNNSNESPLHLAAR 135
+ + G + LH A H L+ L+ A ++L+N+ ++ LHLAA
Sbjct: 1 VFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAI 54
Score = 36.2 bits (82), Expect = 5e-04
Identities = 8/32 (25%), Positives = 11/32 (34%)
Query: 86 LNEKDKTGCSPLHYASREGHIISLENLINLGA 117
+ G +PL A + I L GA
Sbjct: 218 PTARMYGGRTPLGSALLRPNPILARLLRAHGA 249
Score = 35.8 bits (81), Expect = 7e-04
Identities = 12/42 (28%), Positives = 16/42 (38%)
Query: 94 CSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135
+PLH A LE L+ GA + +PL A
Sbjct: 193 RTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALL 234
Score = 34.7 bits (78), Expect = 0.002
Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 11/92 (11%)
Query: 42 KDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYAS 101
+ LHL V++ E LG L+ ++ G + LH A+
Sbjct: 5 VTEDGDTALHLAVIHQ-------HEPFLDFLLGFSAG----HEYLDLQNDLGQTALHLAA 53
Query: 102 REGHIISLENLINLGACINLKNNSNESPLHLA 133
G ++E L GA + + + LHLA
Sbjct: 54 ILGEASTVEKLYAAGAGVLVAERGGHTALHLA 85
Score = 32.8 bits (73), Expect = 0.008
Identities = 10/35 (28%), Positives = 12/35 (34%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKA 37
GAD R+PL A R L + A
Sbjct: 215 GADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249
Score = 31.6 bits (70), Expect = 0.019
Identities = 20/127 (15%), Positives = 38/127 (29%)
Query: 5 DLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEF 64
L++ + ++ L LAA G TV L A +L+ + LHL
Sbjct: 37 YLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACV 96
Query: 65 AEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNN 124
+ + + Q+ D + + + + +N
Sbjct: 97 LLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENY 156
Query: 125 SNESPLH 131
+PLH
Sbjct: 157 DGHTPLH 163
Score = 25.8 bits (55), Expect = 2.2
Identities = 5/37 (13%), Positives = 11/37 (29%)
Query: 21 ASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNG 57
+ L++ A+ + R L +L
Sbjct: 200 VEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRP 236
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 47.5 bits (111), Expect = 6e-08
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 4/47 (8%)
Query: 93 GCSPLHYASREGHIISLENLINL----GACINLKNNSNESPLHLAAR 135
G +PLH A +G++ ++ L+NL G +++ NN ++PLHLA
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVI 49
Score = 46.4 bits (108), Expect = 1e-07
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 93 GCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135
G S LH AS G + + L+ GA +LKN N++PL +A
Sbjct: 177 GSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARS 219
Score = 32.9 bits (73), Expect = 0.007
Identities = 5/21 (23%), Positives = 8/21 (38%)
Query: 86 LNEKDKTGCSPLHYASREGHI 106
+ K+ +PL A I
Sbjct: 203 SSLKNCHNDTPLMVARSRRVI 223
Score = 31.0 bits (68), Expect = 0.032
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 3 GADLNVLDKEKRSPLLLAASRG 24
GAD ++ + +PL++A SR
Sbjct: 200 GADSSLKNCHNDTPLMVARSRR 221
Score = 31.0 bits (68), Expect = 0.032
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 14 RSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNG 57
S L A+ RG V TLVR+ A+ LK+ + L +
Sbjct: 178 SSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRR 221
Score = 28.7 bits (62), Expect = 0.22
Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
Query: 14 RSPLLLAASRGGWKTVLTLV----RNKANILLKDINRRNILHLLVLN 56
+PL +A +G V LV + + + + R+ LHL V+
Sbjct: 4 DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVIT 50
Score = 24.8 bits (52), Expect = 4.1
Identities = 11/48 (22%), Positives = 19/48 (39%)
Query: 86 LNEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLA 133
L+ + +PLH A + L+ GA + ++ HLA
Sbjct: 33 LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLA 80
Score = 24.4 bits (51), Expect = 6.1
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGW 26
G +L++ + +++PL LA
Sbjct: 30 GRELDIYNNLRQTPLHLAVITTLP 53
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 46.0 bits (107), Expect = 2e-07
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 4/47 (8%)
Query: 93 GCSPLHYASREGHIIS----LENLINLGACINLKNNSNESPLHLAAR 135
G S LH A + + A +N +NN ++PLHLA
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVI 48
Score = 38.0 bits (86), Expect = 1e-04
Identities = 11/43 (25%), Positives = 16/43 (37%)
Query: 93 GCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135
G + LH A + + L+ GA +N SP L
Sbjct: 145 GRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWG 187
Score = 36.0 bits (81), Expect = 6e-04
Identities = 7/41 (17%), Positives = 9/41 (21%)
Query: 87 NEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNE 127
N G SP + L L +E
Sbjct: 172 NRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESE 212
Score = 31.8 bits (70), Expect = 0.016
Identities = 10/48 (20%), Positives = 16/48 (33%)
Query: 1 MTGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRN 48
GAD+N + + SP L R + L + L +
Sbjct: 166 KCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESED 213
Score = 29.9 bits (65), Expect = 0.081
Identities = 13/61 (21%), Positives = 22/61 (36%), Gaps = 10/61 (16%)
Query: 45 NRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREG 104
+ + LHL +++ K EV G+ LN ++ +PLH A
Sbjct: 1 DGDSFLHLAIIHEE---KALTMEVIRQVKGDL-------AFLNFQNNLQQTPLHLAVITN 50
Query: 105 H 105
Sbjct: 51 Q 51
Score = 28.3 bits (61), Expect = 0.22
Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 4/42 (9%)
Query: 14 RSPLLLAASRGGWKTVLTLVR----NKANILLKDINRRNILH 51
S L LA + ++R + A + ++ ++ LH
Sbjct: 3 DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLH 44
Score = 24.5 bits (51), Expect = 5.8
Identities = 12/80 (15%), Positives = 26/80 (32%), Gaps = 9/80 (11%)
Query: 14 RSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFL 73
R+ L LA V L++ A++ + L I++ ++
Sbjct: 146 RTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL--- 202
Query: 74 GEGEASQGIQNLLNEKDKTG 93
+ +Q L +D+
Sbjct: 203 ------ENLQMLPESEDEES 216
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 45.2 bits (105), Expect = 4e-07
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 96 PLHYASREGHIISLENLINL-GACINLKNNSNESPLHLAAR 135
PLH A E ++ L++ + + K+ PLH +
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVS 43
Score = 41.7 bits (96), Expect = 6e-06
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 86 LNEKDKTGCSPLHYASREGHIISLENLI-NLGACINLKNNSNESPLHLAAR 135
+N +DK G +PL +A EGH + L+ GA +L +N +A
Sbjct: 165 VNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 215
Score = 32.5 bits (72), Expect = 0.008
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 84 NLLNEKDKTGCSPLHYASREGHIISLENLINLGAC 118
+LL +KD+ G PLH++ L++
Sbjct: 25 SLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 59
Score = 32.1 bits (71), Expect = 0.015
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 16 PLLLAASRGGWKTVLTLV-RNKANILLKDINRRNILHLLVLNG 57
PL A + V L+ + +L KD + R LH V
Sbjct: 3 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQ 45
Score = 29.4 bits (64), Expect = 0.12
Identities = 5/32 (15%), Positives = 8/32 (25%), Gaps = 3/32 (9%)
Query: 86 LNEKDKTGCSPLHYASREGHIISLENLINLGA 117
+ D G A E + +N
Sbjct: 199 YDLVDNKGAKAEDVALNEQVK---KFFLNNVV 227
Score = 28.2 bits (61), Expect = 0.26
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGW 26
+ L D++ R PL + S
Sbjct: 24 PSLLLQKDQDGRIPLHWSVSFQAH 47
Score = 27.9 bits (60), Expect = 0.40
Identities = 5/36 (13%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKAN 38
GA+ +++D + +A + + + N +
Sbjct: 196 GAEYDLVDNKGAKAEDVALNE---QVKKFFLNNVVD 228
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 42.6 bits (99), Expect = 4e-06
Identities = 15/111 (13%), Positives = 26/111 (23%), Gaps = 13/111 (11%)
Query: 27 KTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLL 86
+ ++ K I I + + G + L + +
Sbjct: 71 HYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLC-----LLLTSDEI------V 119
Query: 87 NEKDKTGCSPLHYASREGHIISLENLINLGACINLKN--NSNESPLHLAAR 135
A+ GH+ L L L + N LAA
Sbjct: 120 KVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAE 170
Score = 38.3 bits (88), Expect = 9e-05
Identities = 17/127 (13%), Positives = 31/127 (24%), Gaps = 15/127 (11%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGW---KTVLTLVRNKANILLKDINRRNILHLLVLNGGG 59
+D + + +AA G T+ L+ + + + L N G
Sbjct: 80 WSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAEN--G 137
Query: 60 HIKEFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACI 119
H+ V ++ A+ GH+ L L L
Sbjct: 138 HL-----HVLNRLC-----ELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTE 187
Query: 120 NLKNNSN 126
Sbjct: 188 ATAMIQA 194
Score = 38.3 bits (88), Expect = 1e-04
Identities = 19/134 (14%), Positives = 33/134 (24%), Gaps = 13/134 (9%)
Query: 3 GADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNI--LHLLVLNGGGH 60
+ V+ E LAA G + L ++ I N L NG H
Sbjct: 116 DEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLH 175
Query: 61 IKEFAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACIN 120
+ E+A + + + A GH + L++ +
Sbjct: 176 VLNRLCELAPTE-----------ATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA 224
Query: 121 LKNNSNESPLHLAA 134
Sbjct: 225 YAEIHEFEYGEKYV 238
Score = 37.2 bits (85), Expect = 3e-04
Identities = 18/139 (12%), Positives = 37/139 (26%), Gaps = 7/139 (5%)
Query: 4 ADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHL-LVLNGGGHIK 62
A + + + A RG + L+ + +I+ + H+
Sbjct: 188 ATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVN 247
Query: 63 EFAEEVAAVFLGEGEASQGI-QNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINL 121
E A L + + + L + E + + L+++ L
Sbjct: 248 RLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKAL 307
Query: 122 KN-----NSNESPLHLAAR 135
L LA R
Sbjct: 308 APTATIPGDANELLRLALR 326
Score = 26.4 bits (57), Expect = 1.1
Identities = 11/94 (11%), Positives = 22/94 (23%), Gaps = 2/94 (2%)
Query: 28 TVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEASQGIQNLLN 87
L L + ++ N E + L
Sbjct: 254 DAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPT--A 311
Query: 88 EKDKTGCSPLHYASREGHIISLENLINLGACINL 121
L A R G+ + L+++ + + L
Sbjct: 312 TIPGDANELLRLALRLGNQGACALLLSIPSVLAL 345
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 40.2 bits (92), Expect = 2e-05
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 87 NEKDKTGCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135
+ +D +PL A+REG + + L++ A + ++ + P +A+
Sbjct: 150 DAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASE 198
Score = 39.4 bits (90), Expect = 4e-05
Identities = 22/103 (21%), Positives = 34/103 (33%), Gaps = 14/103 (13%)
Query: 4 ADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKE 63
AD+N D ++ L AA+ + V L+ + AN +D L +E
Sbjct: 114 ADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLF-------LAARE 166
Query: 64 FAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHI 106
+ E + L A+ D P AS H
Sbjct: 167 GSYEASKALLDNF-AN------REITDHMDRLPRDVASERLHH 202
Score = 31.7 bits (70), Expect = 0.016
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 109 LENLINLGACINLKNNSN-ESPLHLAAR 135
+ +L+ GA +N + E+ LHLAAR
Sbjct: 5 ISDLLAQGAELNATMDKTGETSLHLAAR 32
Score = 30.5 bits (67), Expect = 0.040
Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 86 LNEK-DKTGCSPLHYASREGHIISLENL 112
LN DKTG + LH A+R + + L
Sbjct: 15 LNATMDKTGETSLHLAARFARADAAKRL 42
Score = 30.5 bits (67), Expect = 0.048
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 3 GADLNVLDKEKRSPLLLAASRG 24
A+ + D R P +A+ R
Sbjct: 179 FANREITDHMDRLPRDVASERL 200
Score = 28.6 bits (62), Expect = 0.18
Identities = 14/62 (22%), Positives = 24/62 (38%)
Query: 5 DLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEF 64
+ + D + +PL LAA G ++ L+ N AN + D R + I
Sbjct: 148 NRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRL 207
Query: 65 AE 66
+
Sbjct: 208 LD 209
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 36.8 bits (83), Expect = 2e-04
Identities = 8/37 (21%), Positives = 16/37 (43%)
Query: 95 SPLHYASREGHIISLENLINLGACINLKNNSNESPLH 131
+ L A+ G + L +L+ +N +N + L
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQ 39
Score = 32.2 bits (71), Expect = 0.009
Identities = 4/30 (13%), Positives = 9/30 (30%)
Query: 87 NEKDKTGCSPLHYASREGHIISLENLINLG 116
++ G + A G + + G
Sbjct: 127 GHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 27.9 bits (60), Expect = 0.25
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 15 SPLLLAASRGGWKTVLTLVRNKANILLKDINRRNILH 51
+ L AA+RG + + +L++N N+ ++ R L
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQ 39
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 33.7 bits (75), Expect = 0.003
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 93 GCSPLHYASREGHIISLENLINLGACINLKNNSNESPLHLAAR 135
+ LH+A+ H +E LI GA ++ ++ ++ ++
Sbjct: 100 KMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISID 142
Score = 32.5 bits (72), Expect = 0.007
Identities = 2/21 (9%), Positives = 8/21 (38%)
Query: 86 LNEKDKTGCSPLHYASREGHI 106
++ + K + + G+
Sbjct: 126 VHTQSKFCKTAFDISIDNGNE 146
Score = 31.4 bits (69), Expect = 0.017
Identities = 7/31 (22%), Positives = 10/31 (32%)
Query: 96 PLHYASREGHIISLENLINLGACINLKNNSN 126
L A+R G + L+ GA
Sbjct: 5 KLLEAARAGQDDEVRILMANGAPFTTDWLGT 35
Score = 26.4 bits (56), Expect = 0.97
Identities = 5/24 (20%), Positives = 11/24 (45%)
Query: 1 MTGADLNVLDKEKRSPLLLAASRG 24
GAD++ K ++ ++ G
Sbjct: 121 KYGADVHTQSKFCKTAFDISIDNG 144
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 32.9 bits (73), Expect = 0.005
Identities = 26/139 (18%), Positives = 54/139 (38%), Gaps = 20/139 (14%)
Query: 16 PLLLAASRGGWKTVLTLV-RNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLG 74
L AA+RG + V L+ R + + + L +++ E ++ A+ +
Sbjct: 5 RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQ 64
Query: 75 EGEASQGIQNL------------------LNEKDKTGCSPLHYASREGHIISLENLINLG 116
+ + + + +N D TG P+H A +EGH + L
Sbjct: 65 DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-E 123
Query: 117 ACINLKNNSNESPLHLAAR 135
+ ++ ++ +PL LA +
Sbjct: 124 SDLHRRDARGLTPLELALQ 142
Score = 32.9 bits (73), Expect = 0.006
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 86 LNEKDKTGCSPLHYASREGHIISLENLIN 114
L+ +D G +PL A + G ++ L
Sbjct: 126 LHRRDARGLTPLELALQRGAQDLVDILQG 154
Score = 27.1 bits (58), Expect = 0.51
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 4 ADLNVLDKEKRSPLLLAASRGGWKTVLTLV 33
+DL+ D +PL LA RG V L
Sbjct: 124 SDLHRRDARGLTPLELALQRGAQDLVDILQ 153
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 31.8 bits (70), Expect = 0.011
Identities = 7/28 (25%), Positives = 11/28 (39%)
Query: 93 GCSPLHYASREGHIISLENLINLGACIN 120
L A+ G + + L+ GA N
Sbjct: 3 SADWLATAAARGRVEEVRALLEAGANPN 30
Score = 29.5 bits (64), Expect = 0.080
Identities = 7/28 (25%), Positives = 10/28 (35%)
Query: 87 NEKDKTGCSPLHYASREGHIISLENLIN 114
+ +D G P+ A GH L
Sbjct: 96 DVRDAWGRLPVDLAEELGHRDVARYLRA 123
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 31.5 bits (70), Expect = 0.018
Identities = 27/132 (20%), Positives = 45/132 (34%), Gaps = 17/132 (12%)
Query: 10 DKEKRSPLLLAASRGGWKTVLTLVRNKANILLK------DINRRNILHLLVLNGGGHIKE 63
K L A +L + ++ K LHL V +
Sbjct: 3 TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLH 62
Query: 64 FAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKN 123
+ FL + + L+++ G + LHY + L+ L+ A I + N
Sbjct: 63 IVD-----FLVQNSGN------LDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIAN 111
Query: 124 NSNESPLHLAAR 135
S E+PL +A R
Sbjct: 112 ESGETPLDIAKR 123
Score = 29.6 bits (65), Expect = 0.083
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 87 NEKDKTGCSPLHYASREGHIISLENLINLGA 117
+++G +PL A R H E L +
Sbjct: 108 EIANESGETPLDIAKRLKHEHCEELLTQALS 138
Score = 26.5 bits (57), Expect = 0.95
Identities = 5/45 (11%), Positives = 15/45 (33%)
Query: 1 MTGADLNVLDKEKRSPLLLAASRGGWKTVLTLVRNKANILLKDIN 45
A + + ++ +PL +A L + + ++
Sbjct: 102 RGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVH 146
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 30.0 bits (66), Expect = 0.052
Identities = 5/26 (19%), Positives = 11/26 (42%)
Query: 95 SPLHYASREGHIISLENLINLGACIN 120
+ L +S EG ++ +I +
Sbjct: 3 ALLLDSSLEGEFDLVQRIIYEVDDPS 28
Score = 28.1 bits (61), Expect = 0.20
Identities = 4/36 (11%), Positives = 10/36 (27%)
Query: 84 NLLNEKDKTGCSPLHYASREGHIISLENLINLGACI 119
+ D + EG+ + L + +
Sbjct: 94 FAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 129
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 28.7 bits (62), Expect = 0.14
Identities = 4/22 (18%), Positives = 7/22 (31%)
Query: 89 KDKTGCSPLHYASREGHIISLE 110
K G + L + L+
Sbjct: 97 KGPDGLTALEATDNQAIKALLQ 118
Score = 27.2 bits (58), Expect = 0.38
Identities = 2/19 (10%), Positives = 9/19 (47%)
Query: 96 PLHYASREGHIISLENLIN 114
+A + G + +++ +
Sbjct: 5 EFMWALKNGDLDEVKDYVA 23
>d1c1ka_ a.120.1.1 (A:) gene 59 helicase assembly protein
{Bacteriophage T4 [TaxId: 10665]}
Length = 217
Score = 26.7 bits (59), Expect = 0.96
Identities = 12/64 (18%), Positives = 27/64 (42%)
Query: 64 FAEEVAAVFLGEGEASQGIQNLLNEKDKTGCSPLHYASREGHIISLENLINLGACINLKN 123
F E++ ++ + + E + S + + +IIS E I L + +N+ +
Sbjct: 113 FEEDIRNIYYFSKKVEVSAFKEIFEYNPKVQSSYIFKLLQSNIISFETFILLDSFLNIID 172
Query: 124 NSNE 127
+E
Sbjct: 173 KHDE 176
>d1sqwa2 d.17.6.3 (A:1-94) Nip7p homolog, N-terminal domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 25.3 bits (56), Expect = 1.5
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 9/47 (19%)
Query: 82 IQNLLNEKDKTGCSPLH-----YASRE----GHIISLENLINLGACI 119
+Q L++ D T C LH Y S + IS + L++LG C
Sbjct: 24 LQLLVDRPDGTYCFRLHNDRVYYVSEKIMKLAANISGDKLVSLGTCF 70
>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 236
Score = 25.6 bits (55), Expect = 1.9
Identities = 10/77 (12%), Positives = 20/77 (25%), Gaps = 1/77 (1%)
Query: 12 EKRSPLLLAASRG-GWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAA 70
E R L+ G + V + D+ V+ +
Sbjct: 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASVIVKMTDSFTEQADQVT 60
Query: 71 VFLGEGEASQGIQNLLN 87
+G+ Q + +L
Sbjct: 61 AEVGKLLGDQKVDAILC 77
>d1z05a1 a.4.5.63 (A:10-80) Transcriptional regulator VC2007
N-terminal domain {Vibrio cholerae [TaxId: 666]}
Length = 71
Score = 24.4 bits (53), Expect = 2.1
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 41 LKDINRRNILHLLVLNGGGHIKEFAEEV 68
+K IN + L+ G + ++E
Sbjct: 3 IKQINAGRVYKLIDQKGPISRIDLSKES 30
>d2giva1 d.108.1.1 (A:4-274) Probable histone acetyltransferase
MYST1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 24.0 bits (52), Expect = 6.6
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 4/35 (11%)
Query: 85 LLNEKDKTGCSPLHYASREGHIISLENLINLGACI 119
+L E D+ G + Y S+E N+ ACI
Sbjct: 111 ILTEVDRQGAHIVGYFSKEKESPDGNNV----ACI 141
>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine
reductase) {Nematode (Caenorhabditis elegans) [TaxId:
6239]}
Length = 235
Score = 24.1 bits (51), Expect = 7.6
Identities = 7/80 (8%), Positives = 17/80 (21%), Gaps = 1/80 (1%)
Query: 21 ASRG-GWKTVLTLVRNKANILLKDINRRNILHLLVLNGGGHIKEFAEEVAAVFLGEGEAS 79
G + +N +L D++ + +L G E+
Sbjct: 10 GKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDGNKNWTEQEQSILEQTASSLQG 69
Query: 80 QGIQNLLNEKDKTGCSPLHY 99
+ +
Sbjct: 70 SQVDGVFCVAGGWAGGSASS 89
>d1hlca_ b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo sapiens)
[TaxId: 9606]}
Length = 129
Score = 23.2 bits (50), Expect = 9.0
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Query: 102 REGHIISLENLINLGA---CINLKNNSNESPLHLAAR 135
+ G + + I G INL +++ LH R
Sbjct: 10 KPGSTLKITGSIADGTDGFVINLGQGTDKLNLHFNPR 46
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.135 0.383
Gapped
Lambda K H
0.267 0.0638 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 443,467
Number of extensions: 18266
Number of successful extensions: 211
Number of sequences better than 10.0: 1
Number of HSP's gapped: 169
Number of HSP's successfully gapped: 125
Length of query: 135
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 59
Effective length of database: 1,364,116
Effective search space: 80482844
Effective search space used: 80482844
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 48 (22.5 bits)