BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8768
(268 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O55227|UNC50_RAT Protein unc-50 homolog OS=Rattus norvegicus GN=Unc50 PE=1 SV=1
Length = 259
Score = 276 bits (707), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 169/233 (72%)
Query: 35 SAAVKRYRYLRRLFKFEQMDFEFALWQMTYLFISPQKVYKNFNYRKEAKSQFARDDPAFL 94
+A KRY+YLRRLF+F QMDFEFA WQM YLF SPQ+VY+NF+YRK+ K Q+ARDDPAFL
Sbjct: 26 TAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFL 85
Query: 95 VLLAGWLCLSSLAFTLNFHLGFWSFVKFLLNFLFVDCIAVGLVIATFLWYLSNKYLIKNQ 154
VLL+ WLC+S++ F +GF+ +K LL +F+DC+ VGL+I+T +W++SNKYL+K Q
Sbjct: 86 VLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVFIDCVGVGLLISTLMWFISNKYLVKRQ 145
Query: 155 HLGQDVEWAYCFDVHLNAFCPMLVISHIVQLLMYNIFMEHDWFLPVFLGNLLWFLSLSYY 214
DVEW Y FDVHLNAF P+LVI H +QL N + D F+ +GN LW +++ YY
Sbjct: 146 SRDYDVEWGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLIAVGYY 205
Query: 215 VYITFLGYNCLPILHTTQVILSPLIPILIYFAISMLAGWNMSKTLLDYYHYRA 267
+Y+TFLGY+ LP L T V+L P P+++ + +S+ GWN + TL +Y YR
Sbjct: 206 IYVTFLGYSALPFLKNTVVLLYPFAPLIVLYGLSLALGWNFTHTLCSFYKYRV 258
>sp|Q9CQ61|UNC50_MOUSE Protein unc-50 homolog OS=Mus musculus GN=Unc50 PE=2 SV=1
Length = 259
Score = 276 bits (706), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 169/233 (72%)
Query: 35 SAAVKRYRYLRRLFKFEQMDFEFALWQMTYLFISPQKVYKNFNYRKEAKSQFARDDPAFL 94
+A KRY+YLRRLF+F QMDFEFA WQM YLF SPQ+VY+NF+YRK+ K Q+ARDDPAFL
Sbjct: 26 TAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFL 85
Query: 95 VLLAGWLCLSSLAFTLNFHLGFWSFVKFLLNFLFVDCIAVGLVIATFLWYLSNKYLIKNQ 154
VLL+ WLC+S++ F +GF+ +K LL +F+DC+ VGL+I+T +W++SNKYL+K Q
Sbjct: 86 VLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVFIDCVGVGLLISTLMWFVSNKYLVKRQ 145
Query: 155 HLGQDVEWAYCFDVHLNAFCPMLVISHIVQLLMYNIFMEHDWFLPVFLGNLLWFLSLSYY 214
DVEW Y FDVHLNAF P+LVI H +QL N + D F+ +GN LW +++ YY
Sbjct: 146 SRDYDVEWGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLIAVGYY 205
Query: 215 VYITFLGYNCLPILHTTQVILSPLIPILIYFAISMLAGWNMSKTLLDYYHYRA 267
+Y+TFLGY+ LP L T ++L P P+++ + +S+ GWN + TL +Y YR
Sbjct: 206 IYVTFLGYSALPFLKNTVILLYPFAPLMVLYGLSLALGWNFTHTLCSFYKYRV 258
>sp|Q3ZBG6|UNC50_BOVIN Protein unc-50 homolog OS=Bos taurus GN=UNC50 PE=2 SV=1
Length = 259
Score = 275 bits (704), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 169/233 (72%)
Query: 35 SAAVKRYRYLRRLFKFEQMDFEFALWQMTYLFISPQKVYKNFNYRKEAKSQFARDDPAFL 94
+A KRY+YLRRLF+F QMDFEFA WQM YLF SPQ+VY+NF+YRK+ K Q+ARDDPAFL
Sbjct: 26 TAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFL 85
Query: 95 VLLAGWLCLSSLAFTLNFHLGFWSFVKFLLNFLFVDCIAVGLVIATFLWYLSNKYLIKNQ 154
VLL+ WLC+S++ F +GF+ +K LL +F+DC+ VGL+I+T +W++SNKYL+K Q
Sbjct: 86 VLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVFIDCVGVGLLISTLMWFISNKYLVKRQ 145
Query: 155 HLGQDVEWAYCFDVHLNAFCPMLVISHIVQLLMYNIFMEHDWFLPVFLGNLLWFLSLSYY 214
DVEW Y FDVHLNAF P+LVI H +QL N + D F+ +GN LW +++ YY
Sbjct: 146 SRDYDVEWGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLVAVGYY 205
Query: 215 VYITFLGYNCLPILHTTQVILSPLIPILIYFAISMLAGWNMSKTLLDYYHYRA 267
+Y+TFLGY+ LP L T ++L P P+++ + +S+ GWN + TL +Y YR
Sbjct: 206 IYVTFLGYSALPFLKNTVILLYPFAPLILLYGLSLALGWNFTHTLCSFYKYRV 258
>sp|Q53HI1|UNC50_HUMAN Protein unc-50 homolog OS=Homo sapiens GN=UNC50 PE=1 SV=2
Length = 259
Score = 274 bits (701), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 168/233 (72%)
Query: 35 SAAVKRYRYLRRLFKFEQMDFEFALWQMTYLFISPQKVYKNFNYRKEAKSQFARDDPAFL 94
+A KRY+YLRRLF+F QMDFEFA WQM YLF SPQ+VY+NF+YRK+ K Q+ARDDPAFL
Sbjct: 26 TAGAKRYKYLRRLFRFRQMDFEFAAWQMLYLFTSPQRVYRNFHYRKQTKDQWARDDPAFL 85
Query: 95 VLLAGWLCLSSLAFTLNFHLGFWSFVKFLLNFLFVDCIAVGLVIATFLWYLSNKYLIKNQ 154
VLL+ WLC+S++ F +GF+ +K LL + +DC+ VGL+IAT +W++SNKYL+K Q
Sbjct: 86 VLLSIWLCVSTIGFGFVLDMGFFETIKLLLWVVLIDCVGVGLLIATLMWFISNKYLVKRQ 145
Query: 155 HLGQDVEWAYCFDVHLNAFCPMLVISHIVQLLMYNIFMEHDWFLPVFLGNLLWFLSLSYY 214
DVEW Y FDVHLNAF P+LVI H +QL N + D F+ +GN LW +++ YY
Sbjct: 146 SRDYDVEWGYAFDVHLNAFYPLLVILHFIQLFFINHVILTDTFIGYLVGNTLWLVAVGYY 205
Query: 215 VYITFLGYNCLPILHTTQVILSPLIPILIYFAISMLAGWNMSKTLLDYYHYRA 267
+Y+TFLGY+ LP L T ++L P P+++ + +S+ GWN + TL +Y YR
Sbjct: 206 IYVTFLGYSALPFLKNTVILLYPFAPLILLYGLSLALGWNFTHTLCSFYKYRV 258
>sp|Q9VHN5|UNC50_DROME Protein unc-50 homolog OS=Drosophila melanogaster GN=CG9773 PE=1
SV=1
Length = 275
Score = 273 bits (698), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 140/269 (52%), Positives = 181/269 (67%), Gaps = 12/269 (4%)
Query: 1 MSRASSSRSLYSPPLRKDSTSSFLPPPVTHK-TCMSAAVKRYRYLRRLFKFEQMDFEFAL 59
+S SS+ L+SP LPPP H+ C+SA K Y+YLRRL KF QMDFEFAL
Sbjct: 18 VSGYSSASRLHSP----------LPPPANHRRDCLSATTKSYKYLRRLLKFNQMDFEFAL 67
Query: 60 WQMTYLFISPQKVYKNFNYRKEAKSQFARDDPAFLVLLAGWLCLSSLAFTLNFHLGFWSF 119
WQM YLF++PQKVY+NFNYRK+ KSQFARDDPAFLVLL LC++SL F L FW
Sbjct: 68 WQMLYLFVAPQKVYRNFNYRKQTKSQFARDDPAFLVLLVVCLCVTSLGFAYVLGLSFWQS 127
Query: 120 VKFLLNFLFVDCIAVGLVIATFLWYLSNKYLIKNQHLGQDVEWAYCFDVHLNAFCPMLVI 179
+ F+ +FVDCI VG++IA+F W ++N+YL N L D+EW Y FDVHLNAF P L++
Sbjct: 128 ISFIFYVVFVDCIFVGIIIASFFWAVTNRYLRTNS-LEPDIEWGYAFDVHLNAFFPPLML 186
Query: 180 SHIVQLLMYNIFMEHDWFLPVFLGNLLWFLSLSYYVYITFLGYNCLPILHTTQVILSPLI 239
H +QL YN + WF+ FLGN W + + YYVYITFLGYNC+P L T++IL L
Sbjct: 187 LHFIQLFFYNWLISQTWFISRFLGNTFWLMGMGYYVYITFLGYNCIPHLKNTRIILIALP 246
Query: 240 PILIYFAISMLAGWNMSKTLLDYYHYRAF 268
I + F + + GWN + + +++Y YR +
Sbjct: 247 IIFLLFLVVTIIGWNATISFVNFYKYRVY 275
>sp|Q6DKM1|UN50A_XENLA Protein unc-50 homolog A OS=Xenopus laevis GN=unc50-a PE=2 SV=1
Length = 259
Score = 269 bits (688), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 167/233 (71%)
Query: 35 SAAVKRYRYLRRLFKFEQMDFEFALWQMTYLFISPQKVYKNFNYRKEAKSQFARDDPAFL 94
+A KRY+YLRRLF F+QMDFEFALWQM YLF SPQKVY+NF+YRK+ K Q+ARDDPAFL
Sbjct: 26 TAGAKRYKYLRRLFHFKQMDFEFALWQMLYLFTSPQKVYRNFHYRKQTKDQWARDDPAFL 85
Query: 95 VLLAGWLCLSSLAFTLNFHLGFWSFVKFLLNFLFVDCIAVGLVIATFLWYLSNKYLIKNQ 154
VLL+ WLC+S++ F + F+ K LL +F+DC+ VGL+IAT +W++SNKY++K Q
Sbjct: 86 VLLSIWLCVSTVGFGFVLDMSFFETFKLLLWVVFIDCVGVGLLIATLMWFVSNKYMVKRQ 145
Query: 155 HLGQDVEWAYCFDVHLNAFCPMLVISHIVQLLMYNIFMEHDWFLPVFLGNLLWFLSLSYY 214
DVEW Y FDVHLNAF P+LVI H +QL N + WF+ F+GN +W +++ YY
Sbjct: 146 GKDYDVEWGYTFDVHLNAFYPLLVILHFIQLFFINHVILSGWFIGYFVGNTIWLIAIGYY 205
Query: 215 VYITFLGYNCLPILHTTQVILSPLIPILIYFAISMLAGWNMSKTLLDYYHYRA 267
+YITFLGY+ LP L T ++L P + + + +S+ GWN ++ L +Y YR
Sbjct: 206 IYITFLGYSALPFLKNTVILLYPFAALALLYVLSLALGWNFTEKLCLFYKYRV 258
>sp|Q5U520|UN50B_XENLA Protein unc-50 homolog B OS=Xenopus laevis GN=unc50-b PE=2 SV=1
Length = 259
Score = 264 bits (675), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 125/236 (52%), Positives = 164/236 (69%)
Query: 32 TCMSAAVKRYRYLRRLFKFEQMDFEFALWQMTYLFISPQKVYKNFNYRKEAKSQFARDDP 91
T +A KRY+YLRRLF F+QMDFEFALWQM YLF SPQKVY+NF+YRK+ K Q+ARDDP
Sbjct: 23 TRHTAGAKRYKYLRRLFHFKQMDFEFALWQMLYLFTSPQKVYRNFHYRKQTKDQWARDDP 82
Query: 92 AFLVLLAGWLCLSSLAFTLNFHLGFWSFVKFLLNFLFVDCIAVGLVIATFLWYLSNKYLI 151
AFLVLL WLC+S++ F + F+ LL +F+DC+ VGL+IAT +W++SNKY++
Sbjct: 83 AFLVLLGIWLCVSTVGFGFVLDMSFFETFTLLLWVVFIDCVGVGLLIATSMWFVSNKYMV 142
Query: 152 KNQHLGQDVEWAYCFDVHLNAFCPMLVISHIVQLLMYNIFMEHDWFLPVFLGNLLWFLSL 211
Q DVEW Y FDVHLNAF P+LVI H +QL N + WF+ F+GN LW +++
Sbjct: 143 NRQGKDYDVEWGYTFDVHLNAFYPLLVILHFIQLFFINHVILTGWFIGCFVGNTLWLIAI 202
Query: 212 SYYVYITFLGYNCLPILHTTQVILSPLIPILIYFAISMLAGWNMSKTLLDYYHYRA 267
YY+YITFLGY+ LP L T V+L P + + + +S+ GWN + L +Y YR
Sbjct: 203 GYYIYITFLGYSALPFLKNTVVLLYPFAALALLYILSLALGWNFTAKLCLFYKYRV 258
>sp|Q7ZUU1|UNC50_DANRE Protein unc-50 homolog OS=Danio rerio GN=unc50 PE=2 SV=1
Length = 259
Score = 263 bits (672), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 126/235 (53%), Positives = 169/235 (71%), Gaps = 2/235 (0%)
Query: 35 SAAVKRYRYLRRLFKFEQMDFEFALWQMTYLFISPQKVYKNFNYRKEAKSQFARDDPAFL 94
+A KRY+YLRRL F QMDFEFA+WQM YLF SPQKVY+NF+YRK+ K Q+ARDDPAFL
Sbjct: 24 TAGAKRYKYLRRLLHFRQMDFEFAVWQMLYLFTSPQKVYRNFHYRKQTKDQWARDDPAFL 83
Query: 95 VLLAGWLCLSSLAFTLNFHLGFWSFVKFLLNFLFVDCIAVGLVIATFLWYLSNKYLIKNQ 154
VLL+ WLC+S++ F L +GF + LL +F+DCI VGL+I+T +W+++NKYL+K+
Sbjct: 84 VLLSIWLCVSTVGFGLVLDMGFVETLTLLLWVVFIDCIGVGLLISTLMWFVTNKYLMKHP 143
Query: 155 HLGQDVEWAYCFDVHLNAFCPMLVISHIVQLLMYN--IFMEHDWFLPVFLGNLLWFLSLS 212
+ DVEW Y FDVHLNAF P+LVI H +QL N + + DWFL F+GN +W +++
Sbjct: 144 NRDYDVEWGYAFDVHLNAFYPLLVILHFLQLFFINHVVVISSDWFLGYFVGNTMWLIAIG 203
Query: 213 YYVYITFLGYNCLPILHTTQVILSPLIPILIYFAISMLAGWNMSKTLLDYYHYRA 267
YYVYITFLGY+ LP L T V+L P + + + +S+ GWN +K L +Y +R
Sbjct: 204 YYVYITFLGYSALPFLKNTVVLLYPFALLGLLYVLSISLGWNFTKGLCWFYKHRV 258
>sp|Q10045|UNC50_CAEEL Protein unc-50 OS=Caenorhabditis elegans GN=unc-50 PE=2 SV=2
Length = 301
Score = 239 bits (610), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 138/267 (51%), Positives = 172/267 (64%), Gaps = 4/267 (1%)
Query: 3 RASSSRSLYSPPLRKDSTSSFLPPPVTHKTC--MSAAVKRYRYLRRLFKFEQMDFEFALW 60
R +RS Y+ P + + S+ V T MSA K R+ RRL QMDFEFALW
Sbjct: 25 RYEPARSGYTSPGQYSTYSTSTADRVGCLTAVRMSAFAKLSRFTRRLVHIRQMDFEFALW 84
Query: 61 QMTYLFISPQKVYKNFNYRKEAKSQFARDDPAFLVLLAGWLCLSSLAFTLNFHLGFWSFV 120
QM YL I P KVYKNF YRK K QFARDDPAFLVLLA L SS+ + L F
Sbjct: 85 QMLYLLIQPSKVYKNFIYRKRTKDQFARDDPAFLVLLALSLLFSSIFYAYALGLEKIGFF 144
Query: 121 KFLLNFLFVDCIAVGLVIATFLWYLSNKYLIKNQHLGQDVEWAYCFDVHLNAFCPMLVIS 180
F L +FVDCI VG+VIAT LW++SN++L K + QDVEW YCFDVHLNAF PML++
Sbjct: 145 TFFLWSVFVDCIGVGVVIATVLWWVSNRFLRKVRD--QDVEWGYCFDVHLNAFFPMLILL 202
Query: 181 HIVQLLMYNIFMEHDWFLPVFLGNLLWFLSLSYYVYITFLGYNCLPILHTTQVILSPLIP 240
H++ ++Y ++ FL + LGN WFL+ YYVYITFLGY LPILH TQ L P+
Sbjct: 203 HVIVPILYPTLIDSPAFLSILLGNTFWFLAACYYVYITFLGYTALPILHKTQYFLYPISF 262
Query: 241 ILIYFAISMLAGWNMSKTLLDYYHYRA 267
I ++F ++ GWN+S+T L++YH RA
Sbjct: 263 IFMFFVATLTGGWNISRTALNFYHSRA 289
>sp|Q54DD7|UNC50_DICDI Protein unc-50 homolog OS=Dictyostelium discoideum GN=DDB_G0292320
PE=3 SV=1
Length = 261
Score = 179 bits (454), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/242 (37%), Positives = 152/242 (62%), Gaps = 10/242 (4%)
Query: 31 KTCMSAAVKRYR-----YLRRLFKFEQMDFEFALWQMTYLFISPQKVYKNFNYRKEAKSQ 85
+ +++ RYR Y RR+F + QMD E+ W M YL +P +VY+ ++ K+ K+Q
Sbjct: 16 RDGTASSASRYRRLIPEYFRRIFHYPQMDIEYTFWIMFYLCFNPSRVYRVTSWHKQTKNQ 75
Query: 86 FARDDPAFLVLLAGWLCLSSLAFTLNFH-LGFWSFVKFLLNFLFVDCIAVGLVIATFLWY 144
+ARDDPAF V+L ++ ++S+++ + FH L F + +K + +FVD I VGL+IAT W+
Sbjct: 76 WARDDPAFAVILVFFMAIASMSYAITFHFLSFLNVIKVMFWAVFVDFITVGLLIATIGWW 135
Query: 145 LSNKYL---IKNQHLGQDVEWAYCFDVHLNAFCPMLVISHIVQLLMYNIFMEHDWFLPVF 201
++NK+L + N + Q VEW Y FD+H N+F P+ +I ++VQ + I + + F +
Sbjct: 136 VTNKFLRVSVHNHSVDQSVEWLYAFDIHCNSFFPLFIILYVVQFFLLPILLSNSLFAAI- 194
Query: 202 LGNLLWFLSLSYYVYITFLGYNCLPILHTTQVILSPLIPILIYFAISMLAGWNMSKTLLD 261
L N L+ + SYY Y+TFLGYN LP L T V L P+ + + +S++ G N++ ++++
Sbjct: 195 LSNTLYIIGFSYYYYVTFLGYNALPFLQHTVVFLYPIGILFALYIVSVVMGKNLTVSIIN 254
Query: 262 YY 263
+Y
Sbjct: 255 FY 256
>sp|P87155|MUG16_SCHPO Protein GMH1 homolog OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mug16 PE=1 SV=1
Length = 235
Score = 149 bits (376), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 144/233 (61%), Gaps = 13/233 (5%)
Query: 39 KRYRYLRRLFKFEQMDFEFALWQMTYLFISPQKVYKNFNYRKEAKSQFARDDPAFLVLLA 98
+ +R RL K QMDFE A W M LF +P++VY++ RK+ +++ R+D +F+VL +
Sbjct: 3 RSFRNGFRLLKLSQMDFERAWWDMANLFRAPRRVYRSITLRKQNINRYGREDFSFIVLFS 62
Query: 99 GWLCLSSL---AFTLNFHLGFWSFVKFLLNFLFVDCIAVGLVIATFLWYLSNKYLIKNQH 155
+ +S+L F +N G+ + + F+ LFVD AVG+++AT ++++ ++L+K+
Sbjct: 63 CMIVISALLWALFYMNTPKGYVTTITFM---LFVDFGAVGVIMATMYYFIAKRFLMKSND 119
Query: 156 -----LGQDVEWAYCFDVHLNAFCPMLVISHIVQLLMYNIFMEHDWFLPVFLGNLLWFLS 210
+EW YCFDVH N+F P V+ +++QL + + + D F+ +F+GN L+ ++
Sbjct: 120 TILSSTDYQLEWNYCFDVHCNSFFPSFVLLYVIQLFLLPV-ITRDNFISLFMGNTLYLVA 178
Query: 211 LSYYVYITFLGYNCLPILHTTQVILSPLIPILIYFAISMLAGWNMSKTLLDYY 263
L YY Y+TF+GY LP L T +L P+ I +A+S+L G+N+ K ++D Y
Sbjct: 179 LCYYSYLTFIGYQILPFLKNTHALLLPIPMFFIMWALSLL-GFNVPKHVVDVY 230
>sp|P36125|GMH1_YEAST Protein GMH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=GMH1 PE=1 SV=1
Length = 273
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/235 (33%), Positives = 128/235 (54%), Gaps = 16/235 (6%)
Query: 44 LRRLFKF-EQMDFEFALWQMTYLFISPQKVYKNFNYRKEAKSQFARDDPAFLVLLAGWLC 102
+RRLFK + +D E A W+M +L P+K Y++ Y+++ K+Q+ARDDP+F + +
Sbjct: 42 IRRLFKTPKNLDLETASWEMFHLIFHPRKAYRSIYYQRQTKNQWARDDPSFFIFQIALIS 101
Query: 103 LS-------SLAFTLNFHLGFWS----FVKFLLNFLFVDCIAVGLVIATFLWYLSNKYLI 151
LS + F + +G S F K L+ + +D G ++AT + L N+
Sbjct: 102 LSSIIWSIYNSGFNNDSDMGALSIIGHFFKSLVMMVILDFFIFGFIMATIFYLLLNRSHF 161
Query: 152 K-NQHLGQDVEWAYCFDVHLNAFCPMLVISHIVQLLMYNIFMEHDWFLPVFLGNLLWFLS 210
K VEWAYCFDVH N+F +L+ + +Q L+ I +W + + +GN L+ +
Sbjct: 162 KFKSSQNSVVEWAYCFDVHCNSFLIILLCLYFIQFLLLPIINLQNW-ISLLIGNSLYCFA 220
Query: 211 LSYYVYITFLGYNCLPILHTTQVILSPLIPILIYFAISMLAGWNMSKTLLDYYHY 265
+ +Y +TF GYN LP L IL P + + I + IS+ G ++SK L +Y+Y
Sbjct: 221 IGHYFILTFYGYNQLPFLKNLNFILLPTLGLSIIYLISLF-GIDLSKK-LSFYNY 273
>sp|P46019|KPB2_HUMAN Phosphorylase b kinase regulatory subunit alpha, liver isoform
OS=Homo sapiens GN=PHKA2 PE=1 SV=1
Length = 1235
Score = 32.3 bits (72), Expect = 3.8, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 200 VFLGNLLWFLSLSYYVYITFLGYNC 224
V LGNL FL+ S+Y Y+TFL +C
Sbjct: 599 VKLGNLSEFLTTSFYTYLTFLDPDC 623
>sp|P46018|KPB2_RABIT Phosphorylase b kinase regulatory subunit alpha, liver isoform
OS=Oryctolagus cuniculus GN=PHKA2 PE=2 SV=1
Length = 1235
Score = 32.3 bits (72), Expect = 3.9, Method: Composition-based stats.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 200 VFLGNLLWFLSLSYYVYITFLGYNC 224
V LGNL FL+ S+Y Y+TFL +C
Sbjct: 599 VQLGNLSEFLTTSFYTYLTFLDPDC 623
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.332 0.143 0.474
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,470,168
Number of Sequences: 539616
Number of extensions: 3701179
Number of successful extensions: 9988
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 9952
Number of HSP's gapped (non-prelim): 46
length of query: 268
length of database: 191,569,459
effective HSP length: 115
effective length of query: 153
effective length of database: 129,513,619
effective search space: 19815583707
effective search space used: 19815583707
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 60 (27.7 bits)