Your job contains 1 sequence.
>psy877
MIGEPSCWLIRGSTARIPNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVML
GYFTAIKQAELRSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDE
KVKLKRSYNDTHAQKK
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy877
(136 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-081107-11 - symbol:brip1 "BRCA1 interacting... 254 2.3e-20 1
UNIPROTKB|G3N0I3 - symbol:BRIP1 "Uncharacterized protein"... 226 1.1e-17 1
UNIPROTKB|E1BNG9 - symbol:BRIP1 "Uncharacterized protein"... 226 2.0e-17 1
UNIPROTKB|F1MMS0 - symbol:BRIP1 "Uncharacterized protein"... 226 2.1e-17 1
UNIPROTKB|J3QSE8 - symbol:BRIP1 "Fanconi anemia group J p... 225 2.2e-17 1
WB|WBGene00001049 - symbol:dog-1 species:6239 "Caenorhabd... 224 2.8e-17 1
MGI|MGI:2442836 - symbol:Brip1 "BRCA1 interacting protein... 225 2.8e-17 1
UNIPROTKB|Q9BX63 - symbol:BRIP1 "Fanconi anemia group J p... 225 3.0e-17 1
RGD|1307659 - symbol:Brip1 "BRCA1 interacting protein C-t... 222 3.4e-17 1
UNIPROTKB|D4ACW5 - symbol:Brip1 "Protein Brip1" species:1... 222 5.7e-17 1
UNIPROTKB|J9NVZ8 - symbol:BRIP1 "Uncharacterized protein"... 222 6.0e-17 1
UNIPROTKB|E2RHN5 - symbol:BRIP1 "Uncharacterized protein"... 222 6.2e-17 1
DICTYBASE|DDB_G0286621 - symbol:fncJ "DEAD/DEAH box helic... 218 1.4e-16 1
UNIPROTKB|E1C1X9 - symbol:BRIP1 "Fanconi anemia group J p... 216 2.7e-16 1
UNIPROTKB|Q3YK19 - symbol:BRIP1 "Fanconi anemia group J p... 216 2.7e-16 1
ZFIN|ZDB-GENE-041114-191 - symbol:ddx11 "DEAD/H (Asp-Glu-... 210 7.5e-16 1
TAIR|locus:2030497 - symbol:AT1G20720 species:3702 "Arabi... 209 1.4e-15 1
UNIPROTKB|Q7QEI1 - symbol:AGAP000634 "Regulator of telome... 202 6.2e-15 1
UNIPROTKB|Q16X92 - symbol:AAEL008960 "Regulator of telome... 197 2.2e-14 1
RGD|1306675 - symbol:Ddx11 "DEAD/H (Asp-Glu-Ala-Asp/His) ... 196 2.3e-14 1
UNIPROTKB|B4GU19 - symbol:GL14463 "Regulator of telomere ... 195 3.6e-14 1
UNIPROTKB|Q29FS3 - symbol:GA17940 "Regulator of telomere ... 195 3.6e-14 1
UNIPROTKB|B4L1Z2 - symbol:GI15901 "Regulator of telomere ... 194 4.6e-14 1
UNIPROTKB|J3QKX0 - symbol:BRIP1 "Fanconi anemia group J p... 181 4.9e-14 1
UNIPROTKB|B0W9F4 - symbol:CPIJ003765 "Regulator of telome... 193 5.6e-14 1
UNIPROTKB|B4JNS2 - symbol:GH24089 "Regulator of telomere ... 193 5.7e-14 1
UNIPROTKB|B4M891 - symbol:GJ16649 "Regulator of telomere ... 193 5.8e-14 1
MGI|MGI:2443590 - symbol:Ddx11 "DEAD/H (Asp-Glu-Ala-Asp/H... 192 6.2e-14 1
UNIPROTKB|F1NN99 - symbol:DDX11 "Uncharacterized protein"... 190 1.1e-13 1
UNIPROTKB|B4PZB4 - symbol:GE16425 "Regulator of telomere ... 190 1.2e-13 1
UNIPROTKB|B3MSG8 - symbol:GF20802 "Regulator of telomere ... 190 1.2e-13 1
UNIPROTKB|B4I0K4 - symbol:GM12432 "Regulator of telomere ... 188 1.9e-13 1
FB|FBgn0029798 - symbol:CG4078 species:7227 "Drosophila m... 188 1.9e-13 1
UNIPROTKB|B3NSW1 - symbol:GG18780 "Regulator of telomere ... 188 1.9e-13 1
UNIPROTKB|B4NDG5 - symbol:GK24923 "Regulator of telomere ... 187 2.5e-13 1
UNIPROTKB|Q96FC9 - symbol:DDX11 "Probable ATP-dependent R... 185 4.0e-13 1
UNIPROTKB|E2RGR5 - symbol:DDX11 "Uncharacterized protein"... 183 5.9e-13 1
UNIPROTKB|Q92771 - symbol:DDX12P "Putative ATP-dependent ... 182 8.0e-13 1
UNIPROTKB|F1SK84 - symbol:DDX11 "Uncharacterized protein"... 179 1.0e-12 1
ZFIN|ZDB-GENE-050306-11 - symbol:rtel1 "regulator of telo... 181 1.4e-12 1
WB|WBGene00009124 - symbol:rtel-1 species:6239 "Caenorhab... 177 2.9e-12 1
UNIPROTKB|Q93575 - symbol:rtel-1 "Regulator of telomere e... 177 2.9e-12 1
UNIPROTKB|A8MPP1 - symbol:DDX11L8 "Putative ATP-dependent... 176 3.3e-12 1
TAIR|locus:2017894 - symbol:AT1G79890 species:3702 "Arabi... 168 2.3e-11 1
UNIPROTKB|A8WS58 - symbol:rtel-1 "Regulator of telomere e... 166 4.4e-11 1
CGD|CAL0004313 - symbol:orf19.2000 species:5476 "Candida ... 156 4.1e-10 1
TAIR|locus:2016209 - symbol:AT1G79950 species:3702 "Arabi... 153 1.1e-09 1
UNIPROTKB|H0YFY8 - symbol:DDX11 "Probable ATP-dependent R... 139 1.4e-09 1
UNIPROTKB|E1BTS7 - symbol:Gga.49055 "Uncharacterized prot... 152 1.5e-09 1
UNIPROTKB|E1BTS6 - symbol:Gga.49055 "Uncharacterized prot... 152 1.6e-09 1
UNIPROTKB|F1NE49 - symbol:Gga.49055 "Uncharacterized prot... 152 1.6e-09 1
UNIPROTKB|D4ACH4 - symbol:Rtel1 "Regulator of telomere el... 146 7.2e-09 1
UNIPROTKB|Q6H1L8 - symbol:Rtel1 "Regulator of telomere el... 146 7.5e-09 1
MGI|MGI:2139369 - symbol:Rtel1 "regulator of telomere elo... 146 7.5e-09 1
RGD|1306721 - symbol:Rtel1 "regulator of telomere elongat... 146 8.0e-09 1
UNIPROTKB|D6RA96 - symbol:RTEL1-TNFRSF6B "Protein RTEL1-T... 139 2.5e-08 1
UNIPROTKB|F1MWN6 - symbol:RTEL1 "Regulator of telomere el... 135 4.2e-08 1
UNIPROTKB|Q9NZ71 - symbol:RTEL1 "Regulator of telomere el... 139 4.2e-08 1
UNIPROTKB|Q5RE34 - symbol:RTEL1 "Regulator of telomere el... 139 4.6e-08 1
UNIPROTKB|F6WH68 - symbol:RTEL1 "Protein RTEL1-TNFRSF6B" ... 139 5.0e-08 1
UNIPROTKB|E2RLA6 - symbol:RTEL1 "Uncharacterized protein"... 137 7.0e-08 1
POMBASE|SPAC3G6.11 - symbol:chl1 "ATP-dependent DNA helic... 134 9.2e-08 1
UNIPROTKB|A4K436 - symbol:RTEL1 "Regulator of telomere el... 135 1.1e-07 1
UNIPROTKB|E1BL06 - symbol:E1BL06 "Uncharacterized protein... 132 1.7e-07 1
WB|WBGene00010839 - symbol:chl-1 species:6239 "Caenorhabd... 130 2.4e-07 1
ASPGD|ASPL0000038959 - symbol:AN10414 species:162425 "Eme... 130 2.5e-07 1
GENEDB_PFALCIPARUM|MAL13P1.134 - symbol:MAL13P1.134 "heli... 131 2.7e-07 1
UNIPROTKB|Q8IE72 - symbol:MAL13P1.134 "DEAD box helicase,... 131 2.7e-07 1
UNIPROTKB|Q91941 - symbol:ERCC2/XPD "ERCC2/XPD protein" s... 127 4.5e-07 1
CGD|CAL0002854 - symbol:RAD3 species:5476 "Candida albica... 127 4.6e-07 1
UNIPROTKB|Q5AFE9 - symbol:RAD3 "Putative uncharacterized ... 127 4.6e-07 1
FB|FBgn0261850 - symbol:Xpd "Xeroderma pigmentosum D" spe... 127 4.6e-07 1
ZFIN|ZDB-GENE-040426-997 - symbol:ercc2 "excision repair ... 126 5.8e-07 1
UNIPROTKB|E7EVE9 - symbol:ERCC2 "TFIIH basal transcriptio... 123 1.1e-06 1
UNIPROTKB|A8MX75 - symbol:ERCC2 "TFIIH basal transcriptio... 123 1.1e-06 1
UNIPROTKB|J9NWT1 - symbol:ERCC2 "Uncharacterized protein"... 123 1.1e-06 1
SGD|S000005929 - symbol:CHL1 "Probable DNA helicase" spec... 124 1.1e-06 1
UNIPROTKB|F1N2P3 - symbol:ERCC2 "TFIIH basal transcriptio... 123 1.2e-06 1
UNIPROTKB|A6QLJ0 - symbol:ERCC2 "TFIIH basal transcriptio... 123 1.2e-06 1
UNIPROTKB|P18074 - symbol:ERCC2 "TFIIH basal transcriptio... 123 1.2e-06 1
UNIPROTKB|Q60452 - symbol:ERCC2 "TFIIH basal transcriptio... 123 1.2e-06 1
MGI|MGI:95413 - symbol:Ercc2 "excision repair cross-compl... 123 1.2e-06 1
RGD|1309109 - symbol:Ercc2 "excision repair cross-complem... 123 1.2e-06 1
UNIPROTKB|F1PMH9 - symbol:ERCC2 "Uncharacterized protein"... 123 1.2e-06 1
POMBASE|SPAC1D4.12 - symbol:rad15 "transcription factor T... 123 1.2e-06 1
ASPGD|ASPL0000055138 - symbol:AN9436 species:162425 "Emer... 122 1.6e-06 1
TAIR|locus:2014525 - symbol:UVH6 "ULTRAVIOLET HYPERSENSIT... 119 3.2e-06 1
WB|WBGene00021752 - symbol:Y50D7A.2 species:6239 "Caenorh... 116 5.1e-06 1
SGD|S000000973 - symbol:RAD3 "5' to 3' DNA helicase" spec... 117 5.5e-06 1
DICTYBASE|DDB_G0267414 - symbol:repD "transcription facto... 115 8.9e-06 1
FB|FBgn0026876 - symbol:CG11403 species:7227 "Drosophila ... 106 9.3e-05 1
UNIPROTKB|H0YGL4 - symbol:DDX11 "Probable ATP-dependent R... 89 0.00027 1
>ZFIN|ZDB-GENE-081107-11 [details] [associations]
symbol:brip1 "BRCA1 interacting protein C-terminal
helicase 1" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
ZFIN:ZDB-GENE-081107-11 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 eggNOG:COG1199
TIGRFAMs:TIGR00604 CTD:83990 HOGENOM:HOG000068083
HOVERGEN:HBG081519 KO:K15362 OrthoDB:EOG4J6RQ8 EMBL:EF088194
IPI:IPI00877443 RefSeq:NP_001103766.1 UniGene:Dr.85128
ProteinModelPortal:A8QLH7 STRING:A8QLH7 GeneID:794038
KEGG:dre:794038 NextBio:20931680 ArrayExpress:A8QLH7 Uniprot:A8QLH7
Length = 1217
Score = 254 (94.5 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 51/128 (39%), Positives = 80/128 (62%)
Query: 11 RGSTARIPNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRND--ELENVMLGYFTAIKQ 68
RG +P+ + RW++TGL D++ E K+V EPR + + ++ Y+ AI+
Sbjct: 718 RGVLCFLPSYKMLDKLRDRWTNTGLWDKLEECKTVITEPRGGGKGDFDELLQTYYEAIRG 777
Query: 69 AELRSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
+ EK GALL + RGK+SEG+DF D+ AR+V+++GIPFP+I+D +V+LK Y
Sbjct: 778 TAAKG----EKRDGALLVAVCRGKVSEGLDFTDDNARAVVTIGIPFPNIKDLQVELKMKY 833
Query: 129 NDTHAQKK 136
ND HA+ +
Sbjct: 834 NDKHAKSR 841
>UNIPROTKB|G3N0I3 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
EMBL:DAAA02048371 Ensembl:ENSBTAT00000065712 Uniprot:G3N0I3
Length = 756
Score = 226 (84.6 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 51/131 (38%), Positives = 82/131 (62%)
Query: 7 CWLI-RGSTARIPNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELE--NVMLGYF 63
C I +G +P+ + RW STGL + VK+V EP+ ++++ ++ Y+
Sbjct: 545 CQTISQGILCFLPSYKLLEKLKERWLSTGLWYNLELVKTVIVEPQGGEKIDFDELLQMYY 604
Query: 64 TAIKQAELRSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVK 123
AIK EK+ GALL + RGK+SEG+DF+D+ AR+V+++GIPFP+++D +V+
Sbjct: 605 DAIKYK-------GEKD-GALLVAVCRGKVSEGLDFSDDNARAVVTIGIPFPNVKDLQVE 656
Query: 124 LKRSYNDTHAQ 134
LKR YND H++
Sbjct: 657 LKRQYNDQHSK 667
>UNIPROTKB|E1BNG9 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:DAAA02048371 IPI:IPI00923893
Ensembl:ENSBTAT00000048969 Uniprot:E1BNG9
Length = 1098
Score = 226 (84.6 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 51/131 (38%), Positives = 82/131 (62%)
Query: 7 CWLI-RGSTARIPNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELE--NVMLGYF 63
C I +G +P+ + RW STGL + VK+V EP+ ++++ ++ Y+
Sbjct: 619 CQTISQGILCFLPSYKLLEKLKERWLSTGLWYNLELVKTVIVEPQGGEKIDFDELLQMYY 678
Query: 64 TAIKQAELRSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVK 123
AIK EK+ GALL + RGK+SEG+DF+D+ AR+V+++GIPFP+++D +V+
Sbjct: 679 DAIKYK-------GEKD-GALLVAVCRGKVSEGLDFSDDNARAVVTIGIPFPNVKDLQVE 730
Query: 124 LKRSYNDTHAQ 134
LKR YND H++
Sbjct: 731 LKRQYNDQHSK 741
>UNIPROTKB|F1MMS0 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006357
GO:GO:0004003 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
OMA:GVHKISD EMBL:DAAA02048371 IPI:IPI00923893
Ensembl:ENSBTAT00000061499 Uniprot:F1MMS0
Length = 1164
Score = 226 (84.6 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 51/131 (38%), Positives = 82/131 (62%)
Query: 7 CWLI-RGSTARIPNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELE--NVMLGYF 63
C I +G +P+ + RW STGL + VK+V EP+ ++++ ++ Y+
Sbjct: 619 CQTISQGILCFLPSYKLLEKLKERWLSTGLWYNLELVKTVIVEPQGGEKIDFDELLQMYY 678
Query: 64 TAIKQAELRSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVK 123
AIK EK+ GALL + RGK+SEG+DF+D+ AR+V+++GIPFP+++D +V+
Sbjct: 679 DAIKYK-------GEKD-GALLVAVCRGKVSEGLDFSDDNARAVVTIGIPFPNVKDLQVE 730
Query: 124 LKRSYNDTHAQ 134
LKR YND H++
Sbjct: 731 LKRQYNDQHSK 741
>UNIPROTKB|J3QSE8 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
EMBL:AC002994 EMBL:AC005969 EMBL:AC060798 HGNC:HGNC:20473
ProteinModelPortal:J3QSE8 Ensembl:ENST00000577598 Uniprot:J3QSE8
Length = 994
Score = 225 (84.3 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 48/108 (44%), Positives = 73/108 (67%)
Query: 29 RWSSTGLMDRIREVKSVYCEPRRNDE--LENVMLGYFTAIKQAELRSSNTSEKNTGALLF 86
RW STGL + VK+V EP+ ++ + ++ Y+ AIK EK+ GALL
Sbjct: 707 RWLSTGLWHNLELVKTVIVEPQGGEKTNFDELLQVYYDAIKYK-------GEKD-GALLV 758
Query: 87 TIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQ 134
+ RGK+SEG+DF+D+ AR+VI++GIPFP+++D +V+LKR YND H++
Sbjct: 759 AVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSK 806
>WB|WBGene00001049 [details] [associations]
symbol:dog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0043570
"maintenance of DNA repeat elements" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0000723 "telomere maintenance"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI;IMP] [GO:0090329 "regulation of DNA-dependent DNA
replication" evidence=IGI;IMP] InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 GO:GO:0005524
GO:GO:0003677 GO:GO:0000003 GO:GO:0004003 GO:GO:0000723
GO:GO:0006289 GO:GO:0043570 eggNOG:COG1199
GeneTree:ENSGT00530000063199 GO:GO:0090329 KO:K15362 EMBL:Z81526
PIR:T21711 RefSeq:NP_493618.1 ProteinModelPortal:O62217 SMR:O62217
STRING:O62217 PaxDb:O62217 EnsemblMetazoa:F33H2.1.1
EnsemblMetazoa:F33H2.1.2 GeneID:173370 KEGG:cel:CELE_F33H2.1
UCSC:F33H2.1 CTD:173370 WormBase:F33H2.1 HOGENOM:HOG000021716
InParanoid:O62217 OMA:EKELDDS NextBio:879367 Uniprot:O62217
Length = 983
Score = 224 (83.9 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 53/116 (45%), Positives = 74/116 (63%)
Query: 21 DSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKN 80
D C IR +ST M +I K V EPRR+ EL +VM + AI +N +
Sbjct: 777 DQLKQCMIR-NST--MRQIEMKKVVLYEPRRSSELTSVMDQFDAAIFDPSRFGANIN--- 830
Query: 81 TGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
G+L+F +FRGK+SEGIDFAD+ AR VISVGIP+P+ D++V K+ YND ++++K
Sbjct: 831 -GSLMFAVFRGKVSEGIDFADDRARVVISVGIPYPNAMDDQVNAKKLYNDQNSKEK 885
>MGI|MGI:2442836 [details] [associations]
symbol:Brip1 "BRCA1 interacting protein C-terminal helicase
1" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 MGI:MGI:2442836
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0003677 GO:GO:0006281 GO:GO:0006357
GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
CleanEx:MM_BACH1 eggNOG:COG1199 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 CTD:83990 HOGENOM:HOG000068083
HOVERGEN:HBG081519 KO:K15362 OrthoDB:EOG4J6RQ8 EMBL:AL592465
EMBL:AL592065 EMBL:AL645690 EMBL:BC094252 EMBL:AK051878
EMBL:AK080771 IPI:IPI00319607 RefSeq:NP_840094.1 UniGene:Mm.186143
ProteinModelPortal:Q5SXJ3 SMR:Q5SXJ3 STRING:Q5SXJ3
PhosphoSite:Q5SXJ3 PRIDE:Q5SXJ3 Ensembl:ENSMUST00000044423
GeneID:237911 KEGG:mmu:237911 UCSC:uc007ksf.2 InParanoid:Q5SXJ3
OMA:GVHKISD ChiTaRS:BRIP1 NextBio:383570 Bgee:Q5SXJ3
CleanEx:MM_BRIP1 Genevestigator:Q5SXJ3
GermOnline:ENSMUSG00000034329 Uniprot:Q5SXJ3
Length = 1174
Score = 225 (84.3 bits), Expect = 2.8e-17, P = 2.8e-17
Identities = 48/110 (43%), Positives = 73/110 (66%)
Query: 29 RWSSTGLMDRIREVKSVYCEPRRND--ELENVMLGYFTAIKQAELRSSNTSEKNTGALLF 86
RW TGL + VK+V EP+ + + + ++ Y+ AIK EK+ GALL
Sbjct: 710 RWIFTGLWHSLESVKTVIAEPQGGEKTDFDELLQVYYDAIKFK-------GEKD-GALLI 761
Query: 87 TIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
+ RGK+SEG+DF+D+ AR+VI+VGIPFP+++D +V+LKR YND H++ +
Sbjct: 762 AVCRGKVSEGLDFSDDNARAVITVGIPFPNVKDLQVELKRQYNDHHSKSR 811
>UNIPROTKB|Q9BX63 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=NAS] [GO:0003677 "DNA binding" evidence=NAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0000077 "DNA damage checkpoint"
evidence=NAS] [GO:0006302 "double-strand break repair"
evidence=NAS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=IDA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737
GO:GO:0000077 GO:GO:0046872 GO:GO:0003677 GO:GO:0031965
GO:GO:0006357 GO:GO:0051539 GO:GO:0004003 GO:GO:0006302 MIM:114480
InterPro:IPR014001 SMART:SM00487 CleanEx:HS_BACH1 Orphanet:145
PDB:1T29 PDBsum:1T29 MIM:227650 Orphanet:84 eggNOG:COG1199
TIGRFAMs:TIGR00604 CTD:83990 HOGENOM:HOG000068083
HOVERGEN:HBG081519 KO:K15362 OrthoDB:EOG4J6RQ8 EMBL:AF360549
EMBL:AC002994 EMBL:AC005969 EMBL:AC060798 EMBL:BC101472
EMBL:BC101474 EMBL:AK074713 IPI:IPI00012500 IPI:IPI00514398
RefSeq:NP_114432.2 UniGene:Hs.128903 PDB:3AL3 PDBsum:3AL3
ProteinModelPortal:Q9BX63 SMR:Q9BX63 DIP:DIP-41787N IntAct:Q9BX63
MINT:MINT-275883 STRING:Q9BX63 PhosphoSite:Q9BX63 DMDM:57012613
PaxDb:Q9BX63 PRIDE:Q9BX63 DNASU:83990 Ensembl:ENST00000259008
GeneID:83990 KEGG:hsa:83990 UCSC:uc002izk.2 GeneCards:GC17M059759
H-InvDB:HIX0202529 HGNC:HGNC:20473 HPA:HPA005474 MIM:605882
MIM:609054 neXtProt:NX_Q9BX63 PharmGKB:PA134906421
InParanoid:Q9BX63 EvolutionaryTrace:Q9BX63 GenomeRNAi:83990
NextBio:73148 ArrayExpress:Q9BX63 Bgee:Q9BX63 CleanEx:HS_BRIP1
Genevestigator:Q9BX63 GermOnline:ENSG00000136492 Uniprot:Q9BX63
Length = 1249
Score = 225 (84.3 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 48/108 (44%), Positives = 73/108 (67%)
Query: 29 RWSSTGLMDRIREVKSVYCEPRRNDE--LENVMLGYFTAIKQAELRSSNTSEKNTGALLF 86
RW STGL + VK+V EP+ ++ + ++ Y+ AIK EK+ GALL
Sbjct: 707 RWLSTGLWHNLELVKTVIVEPQGGEKTNFDELLQVYYDAIKYK-------GEKD-GALLV 758
Query: 87 TIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQ 134
+ RGK+SEG+DF+D+ AR+VI++GIPFP+++D +V+LKR YND H++
Sbjct: 759 AVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSK 806
>RGD|1307659 [details] [associations]
symbol:Brip1 "BRCA1 interacting protein C-terminal helicase 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0031965 "nuclear membrane" evidence=ISO]
[GO:0071295 "cellular response to vitamin" evidence=IEP]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491 RGD:1307659
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
IPI:IPI00781914 Ensembl:ENSRNOT00000055817 ArrayExpress:D4AD12
GO:GO:0071295 Uniprot:D4AD12
Length = 818
Score = 222 (83.2 bits), Expect = 3.4e-17, P = 3.4e-17
Identities = 47/108 (43%), Positives = 72/108 (66%)
Query: 29 RWSSTGLMDRIREVKSVYCEPRRND--ELENVMLGYFTAIKQAELRSSNTSEKNTGALLF 86
RW TGL + VK+V EP+ + + + ++ Y+ AIK EK+ GALL
Sbjct: 630 RWIFTGLWHSLESVKTVIAEPQGGEKTDFDELLQVYYDAIKFK-------GEKD-GALLI 681
Query: 87 TIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQ 134
+ RGK+SEG+DF+D+ AR+VI++GIPFP+++D +V+LKR YND H++
Sbjct: 682 AVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSK 729
>UNIPROTKB|D4ACW5 [details] [associations]
symbol:Brip1 "Protein Brip1" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491 RGD:1307659
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 TIGRFAMs:TIGR00604 OrthoDB:EOG4J6RQ8 IPI:IPI00372668
Ensembl:ENSRNOT00000038829 ArrayExpress:D4ACW5 Uniprot:D4ACW5
Length = 1170
Score = 222 (83.2 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 47/108 (43%), Positives = 72/108 (66%)
Query: 29 RWSSTGLMDRIREVKSVYCEPRRND--ELENVMLGYFTAIKQAELRSSNTSEKNTGALLF 86
RW TGL + VK+V EP+ + + + ++ Y+ AIK EK+ GALL
Sbjct: 708 RWIFTGLWHSLESVKTVIAEPQGGEKTDFDELLQVYYDAIKFK-------GEKD-GALLI 759
Query: 87 TIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQ 134
+ RGK+SEG+DF+D+ AR+VI++GIPFP+++D +V+LKR YND H++
Sbjct: 760 AVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDHHSK 807
>UNIPROTKB|J9NVZ8 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:AAEX03006594 EMBL:AAEX03006595
EMBL:AAEX03006596 Ensembl:ENSCAFT00000045493 Uniprot:J9NVZ8
Length = 1214
Score = 222 (83.2 bits), Expect = 6.0e-17, P = 6.0e-17
Identities = 49/108 (45%), Positives = 73/108 (67%)
Query: 29 RWSSTGLMDRIREVKSVYCEPRRNDELE-NVMLG-YFTAIKQAELRSSNTSEKNTGALLF 86
RW TGL + VK+V EP+ ++ + N +L Y+ AIK EK+ GALL
Sbjct: 706 RWLYTGLWHNLELVKTVIVEPQGGEKTDFNELLQVYYDAIKYK-------GEKD-GALLV 757
Query: 87 TIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQ 134
+ RGK+SEG+DF+D+ AR+VI++GIPFP+++D +V+LKR YND H++
Sbjct: 758 AVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDQHSK 805
>UNIPROTKB|E2RHN5 [details] [associations]
symbol:BRIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 OMA:GVHKISD EMBL:AAEX03006594
EMBL:AAEX03006595 EMBL:AAEX03006596 Ensembl:ENSCAFT00000028135
Uniprot:E2RHN5
Length = 1244
Score = 222 (83.2 bits), Expect = 6.2e-17, P = 6.2e-17
Identities = 49/108 (45%), Positives = 73/108 (67%)
Query: 29 RWSSTGLMDRIREVKSVYCEPRRNDELE-NVMLG-YFTAIKQAELRSSNTSEKNTGALLF 86
RW TGL + VK+V EP+ ++ + N +L Y+ AIK EK+ GALL
Sbjct: 707 RWLYTGLWHNLELVKTVIVEPQGGEKTDFNELLQVYYDAIKYK-------GEKD-GALLV 758
Query: 87 TIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQ 134
+ RGK+SEG+DF+D+ AR+VI++GIPFP+++D +V+LKR YND H++
Sbjct: 759 AVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKRQYNDQHSK 806
>DICTYBASE|DDB_G0286621 [details] [associations]
symbol:fncJ "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA;IC] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR002464
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00491 dictyBase:DDB_G0286621 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0003677
EMBL:AAFI02000089 GO:GO:0004003 GO:GO:0006302 InterPro:IPR014001
SMART:SM00487 eggNOG:COG1199 TIGRFAMs:TIGR00604 KO:K15362
RefSeq:XP_637574.1 ProteinModelPortal:Q54LI7
EnsemblProtists:DDB0232367 GeneID:8625714 KEGG:ddi:DDB_G0286621
InParanoid:Q54LI7 Uniprot:Q54LI7
Length = 1078
Score = 218 (81.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 45/104 (43%), Positives = 62/104 (59%)
Query: 29 RWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTI 88
RW TG++ +I K + EP+ E + Y IKQ N GA+LF +
Sbjct: 902 RWDETGILKKINAKKRYFYEPKNQREFIETLDNYREEIKQ---------RPNKGAILFAV 952
Query: 89 FRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTH 132
RGK+SEGIDF+D YAR VI VGIP+PS+ D ++ LK+ +NDT+
Sbjct: 953 CRGKVSEGIDFSDEYARGVIVVGIPYPSLVDLRIVLKKEHNDTN 996
>UNIPROTKB|E1C1X9 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein homolog"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004003
TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199 EMBL:AADN02025783
IPI:IPI00820128 Ensembl:ENSGALT00000008466 ArrayExpress:E1C1X9
Uniprot:E1C1X9
Length = 1249
Score = 216 (81.1 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 49/124 (39%), Positives = 74/124 (59%)
Query: 11 RGSTARIPNKDSANGCEIRWSSTGLMDRIREVKSVYCEPR--RNDELENVMLGYFTAIKQ 68
+G +P+ + + RW TGL + VK+V EP+ + + ++ Y+ AIK
Sbjct: 699 QGILCFLPSYKLLDKLKDRWIHTGLWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAIKF 758
Query: 69 AELRSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
EK+ GALL + RGK+SEG+DF D AR+VI++GIPFP+++D +V+LKR Y
Sbjct: 759 K-------GEKD-GALLIAVCRGKVSEGLDFCDENARAVITIGIPFPNVKDLQVELKRKY 810
Query: 129 NDTH 132
ND H
Sbjct: 811 NDQH 814
>UNIPROTKB|Q3YK19 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein homolog"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006281 "DNA repair" evidence=TAS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0006357 GO:GO:0051539 GO:GO:0004003
Reactome:REACT_115612 eggNOG:COG1199 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:DQ109581 IPI:IPI00593256
RefSeq:NP_001028230.1 UniGene:Gga.17801 ProteinModelPortal:Q3YK19
STRING:Q3YK19 Ensembl:ENSGALT00000039225 GeneID:417642
KEGG:gga:417642 CTD:83990 HOGENOM:HOG000068083 HOVERGEN:HBG081519
InParanoid:Q3YK19 KO:K15362 OMA:GYETSCK OrthoDB:EOG4J6RQ8
NextBio:20820915 ArrayExpress:Q3YK19 Uniprot:Q3YK19
Length = 1252
Score = 216 (81.1 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 49/124 (39%), Positives = 74/124 (59%)
Query: 11 RGSTARIPNKDSANGCEIRWSSTGLMDRIREVKSVYCEPR--RNDELENVMLGYFTAIKQ 68
+G +P+ + + RW TGL + VK+V EP+ + + ++ Y+ AIK
Sbjct: 699 QGILCFLPSYKLLDKLKDRWIHTGLWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAIKF 758
Query: 69 AELRSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
EK+ GALL + RGK+SEG+DF D AR+VI++GIPFP+++D +V+LKR Y
Sbjct: 759 K-------GEKD-GALLIAVCRGKVSEGLDFCDENARAVITIGIPFPNVKDLQVELKRKY 810
Query: 129 NDTH 132
ND H
Sbjct: 811 NDQH 814
>ZFIN|ZDB-GENE-041114-191 [details] [associations]
symbol:ddx11 "DEAD/H (Asp-Glu-Ala-Asp/His) box
helicase 11" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0032508 "DNA duplex
unwinding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
ZFIN:ZDB-GENE-041114-191 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 eggNOG:COG1199
KO:K11273 PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
HOGENOM:HOG000241266 HOVERGEN:HBG058884 OrthoDB:EOG4B5P4M CTD:1663
EMBL:BC085645 IPI:IPI00501779 RefSeq:NP_001007320.1
UniGene:Dr.37620 ProteinModelPortal:Q5U399 STRING:Q5U399
GeneID:492353 KEGG:dre:492353 InParanoid:Q5U399 NextBio:20864919
ArrayExpress:Q5U399 Uniprot:Q5U399
Length = 890
Score = 210 (79.0 bits), Expect = 7.5e-16, P = 7.5e-16
Identities = 39/103 (37%), Positives = 67/103 (65%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W STG++ R++ K ++ EP++ ++E V+ Y I+ R SN TGALLF++
Sbjct: 703 WESTGILQRLQSKKKIFQEPKKASQVEQVLSEYSKCIQ----RCSNIGGGQTGALLFSVV 758
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTH 132
GK+SEGI+F+D+ R ++ VG+P+P+I+ +++ K +Y D H
Sbjct: 759 GGKMSEGINFSDDLGRCIVMVGMPYPNIKSPELQEKMAYLDKH 801
>TAIR|locus:2030497 [details] [associations]
symbol:AT1G20720 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 EMBL:CP002684 GO:GO:0005739 GO:GO:0005524
GO:GO:0003677 GO:GO:0004003 KO:K15362 OMA:EKELDDS IPI:IPI00524588
RefSeq:NP_173495.5 UniGene:At.51696 ProteinModelPortal:F4HUN4
SMR:F4HUN4 PRIDE:F4HUN4 EnsemblPlants:AT1G20720.1 GeneID:838662
KEGG:ath:AT1G20720 Uniprot:F4HUN4
Length = 1175
Score = 209 (78.6 bits), Expect = 1.4e-15, P = 1.4e-15
Identities = 50/141 (35%), Positives = 73/141 (51%)
Query: 12 GSTARIPNKDSANGCEIRWSSTGLMDRIREVKSVYCEPR--RNDELENVMLGYFTAI--- 66
GS P+ +RW T R+ K ++ EPR DE ++V+ GY+ +I
Sbjct: 566 GSLVFFPSYKLMEKLCMRWRETEQWSRLCLKKDLFVEPRGGAQDEFDSVLKGYYDSIRGK 625
Query: 67 -----------KQAELRSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFP 115
K +++ + GA + RGK+SEGIDFAD+ AR+VI VGIPFP
Sbjct: 626 NKIIGRNRRAKKAGPIKTETQDDSKKGAAFLAVCRGKVSEGIDFADDNARAVIIVGIPFP 685
Query: 116 SIQDEKVKLKRSYNDTHAQKK 136
++ D +V LK+ YNDT+ K
Sbjct: 686 NLHDIQVGLKKKYNDTYKSSK 706
>UNIPROTKB|Q7QEI1 [details] [associations]
symbol:AGAP000634 "Regulator of telomere elongation
helicase 1 homolog" species:7165 "Anopheles gambiae" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:AAAB01008847 HOGENOM:HOG000007558 KO:K11136 OrthoDB:EOG4S4MX7
RefSeq:XP_311162.5 GeneID:1272449 KEGG:aga:AgaP_AGAP000634
VectorBase:AGAP000634 CTD:1272449 PhylomeDB:Q7QEI1 Uniprot:Q7QEI1
Length = 991
Score = 202 (76.2 bits), Expect = 6.2e-15, P = 6.2e-15
Identities = 42/131 (32%), Positives = 68/131 (51%)
Query: 7 CWLIRGSTARI-PNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTA 65
C +I G P+ N C W ++G+ +I +K ++ EPR D+ M Y+
Sbjct: 551 CPIIPGGLLIFFPSYPLLNKCSEEWQASGIWGQISRLKQIFVEPRGKDQFTTTMAEYYAQ 610
Query: 66 IKQAELRSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLK 125
++ R GA+ + RGK+SEG+DFAD R+V+ G+PFP + D +V LK
Sbjct: 611 VRDPASR---------GAIFMAVCRGKVSEGLDFADANGRAVMITGLPFPPMMDARVVLK 661
Query: 126 RSYNDTHAQKK 136
+ Y DT+ ++
Sbjct: 662 KQYLDTNRTRE 672
>UNIPROTKB|Q16X92 [details] [associations]
symbol:AAEL008960 "Regulator of telomere elongation
helicase 1 homolog" species:7159 "Aedes aegypti" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CH477545 RefSeq:XP_001653621.1 UniGene:Aae.7622
ProteinModelPortal:Q16X92 PRIDE:Q16X92 EnsemblMetazoa:AAEL008960-RA
GeneID:5571306 KEGG:aag:AaeL_AAEL008960 VectorBase:AAEL008960
HOGENOM:HOG000007558 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
PhylomeDB:Q16X92 Uniprot:Q16X92
Length = 1010
Score = 197 (74.4 bits), Expect = 2.2e-14, P = 2.2e-14
Identities = 43/123 (34%), Positives = 63/123 (51%)
Query: 7 CWLIRGST-ARIPNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTA 65
C +I G P+ N C+ W TG+ +I K ++ EPR D+ N M Y+
Sbjct: 558 CPIIPGGLLVFFPSYPLLNKCQEAWQETGIWAQISRTKPIFVEPRGKDQFLNTMSEYYQK 617
Query: 66 IKQAELRSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLK 125
I + GA+ + RGK+SEG+DFAD R+VI G+PFP ++D +V LK
Sbjct: 618 INDPD---------GKGAVFMAVCRGKVSEGLDFADMNGRAVIITGLPFPPLKDARVILK 668
Query: 126 RSY 128
+ Y
Sbjct: 669 KKY 671
>RGD|1306675 [details] [associations]
symbol:Ddx11 "DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000922 "spindle pole" evidence=ISO] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0007062 "sister chromatid cohesion"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 RGD:1306675
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0003677 GO:GO:0000790
GO:GO:0004003 GO:GO:0030496 GO:GO:0000922 PANTHER:PTHR11472:SF5
TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199 GO:GO:0007062
OrthoDB:EOG4B5P4M IPI:IPI00765140 Ensembl:ENSRNOT00000016536
UCSC:RGD:1306675 Uniprot:D3ZT96
Length = 882
Score = 196 (74.1 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 43/128 (33%), Positives = 71/128 (55%)
Query: 12 GSTARIPNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAEL 71
G +P+ + W TGL+ R+ K ++ EP+R ++E V+ Y T I
Sbjct: 676 GMVCFLPSYEYLRQVHAHWDKTGLLARLSVRKKIFQEPKRASQVEQVLTAYSTCIASC-- 733
Query: 72 RSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND- 130
S++ TGALL ++ GK+SEGI+F+D+ R V+ VG+P+P+I+ +++ K +Y D
Sbjct: 734 --SHSEGHLTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLDQ 791
Query: 131 ----THAQ 134
TH Q
Sbjct: 792 TIPRTHGQ 799
>UNIPROTKB|B4GU19 [details] [associations]
symbol:GL14463 "Regulator of telomere elongation helicase 1
homolog" species:7234 "Drosophila persimilis" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 TIGRFAMs:TIGR00604 KO:K11136
OrthoDB:EOG4S4MX7 EMBL:CH479190 RefSeq:XP_002022098.1
EnsemblMetazoa:FBtr0180078 GeneID:6596883 KEGG:dpe:Dper_GL14463
FlyBase:FBgn0152068 Uniprot:B4GU19
Length = 1009
Score = 195 (73.7 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 43/119 (36%), Positives = 66/119 (55%)
Query: 18 PNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTS 77
P+ N C W ++GL I K ++ EPR D+ + M ++ AI+ ++
Sbjct: 563 PSYPMLNKCVDAWQASGLWADISCKKPIFVEPRGKDQFTSTMEEFYQAIRDSK------- 615
Query: 78 EKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
GA+ + RGK+SEG+DFAD R+VI G+PFP ++D KV LKR Y +T+ K+
Sbjct: 616 ----GAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLETNRTKE 670
>UNIPROTKB|Q29FS3 [details] [associations]
symbol:GA17940 "Regulator of telomere elongation helicase 1
homolog" species:46245 "Drosophila pseudoobscura pseudoobscura"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0010569 "regulation of double-strand break repair
via homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CH379065 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_001354453.2
GeneID:4814338 KEGG:dpo:Dpse_GA17940 FlyBase:FBgn0077949
InParanoid:Q29FS3 Uniprot:Q29FS3
Length = 1009
Score = 195 (73.7 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 43/119 (36%), Positives = 66/119 (55%)
Query: 18 PNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTS 77
P+ N C W ++GL I K ++ EPR D+ + M ++ AI+ ++
Sbjct: 563 PSYPMLNKCVDAWQASGLWADISCKKPIFVEPRGKDQFTSTMEEFYQAIRDSK------- 615
Query: 78 EKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
GA+ + RGK+SEG+DFAD R+VI G+PFP ++D KV LKR Y +T+ K+
Sbjct: 616 ----GAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLETNRTKE 670
>UNIPROTKB|B4L1Z2 [details] [associations]
symbol:GI15901 "Regulator of telomere elongation helicase 1
homolog" species:7230 "Drosophila mojavensis" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0010569 TIGRFAMs:TIGR00604
EMBL:CH933810 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_002010396.1
EnsemblMetazoa:FBtr0166626 GeneID:6584754 KEGG:dmo:Dmoj_GI15901
FlyBase:FBgn0138650 InParanoid:B4L1Z2 Uniprot:B4L1Z2
Length = 1014
Score = 194 (73.4 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 42/119 (35%), Positives = 65/119 (54%)
Query: 18 PNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTS 77
P+ N C W ++GL + K ++ EPR D+ + M ++ AI+ ++
Sbjct: 563 PSYPMLNQCVDAWQASGLWADLSSRKPIFLEPRGKDQFTSTMEEFYQAIRDSK------- 615
Query: 78 EKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
GA + RGK+SEG+DFAD R+VI G+PFP ++D KV LKR Y +T+ K+
Sbjct: 616 ----GACFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLETNRTKE 670
>UNIPROTKB|J3QKX0 [details] [associations]
symbol:BRIP1 "Fanconi anemia group J protein" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR006555 Pfam:PF13307
SMART:SM00491 GO:GO:0005524 GO:GO:0003676 GO:GO:0008026
EMBL:AC002994 EMBL:AC005969 EMBL:AC060798 HGNC:HGNC:20473
Ensembl:ENST00000584322 Uniprot:J3QKX0
Length = 180
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 40/93 (43%), Positives = 61/93 (65%)
Query: 29 RWSSTGLMDRIREVKSVYCEPRRNDE--LENVMLGYFTAIKQAELRSSNTSEKNTGALLF 86
RW STGL + VK+V EP+ ++ + ++ Y+ AIK EK+ GALL
Sbjct: 35 RWLSTGLWHNLELVKTVIVEPQGGEKTNFDELLQVYYDAIKYK-------GEKD-GALLV 86
Query: 87 TIFRGKISEGIDFADNYARSVISVGIPFPSIQD 119
+ RGK+SEG+DF+D+ AR+VI++GIPFP+++D
Sbjct: 87 AVCRGKVSEGLDFSDDNARAVITIGIPFPNVKD 119
>UNIPROTKB|B0W9F4 [details] [associations]
symbol:CPIJ003765 "Regulator of telomere elongation
helicase 1 homolog" species:7176 "Culex quinquefasciatus"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0010569 "regulation of double-strand break repair
via homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
HOGENOM:HOG000007558 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
EMBL:DS231864 RefSeq:XP_001845338.1 ProteinModelPortal:B0W9F4
EnsemblMetazoa:CPIJ003765-RA GeneID:6035102
KEGG:cqu:CpipJ_CPIJ003765 VectorBase:CPIJ003765 PhylomeDB:B0W9F4
Uniprot:B0W9F4
Length = 978
Score = 193 (73.0 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 42/123 (34%), Positives = 62/123 (50%)
Query: 7 CWLIRGST-ARIPNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTA 65
C +I G P+ N C+ W TG+ +I K ++ EPR D+ N M Y+
Sbjct: 560 CPIIPGGLLVFFPSYPLLNKCQEAWQETGIWAQISRTKPIFVEPRGKDQFLNTMTEYYAK 619
Query: 66 IKQAELRSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLK 125
I + GA+ + RGK+SEG+DFAD R+ I G+PFP ++D +V LK
Sbjct: 620 INDPD---------GKGAVFMAVCRGKVSEGLDFADMNGRACIITGLPFPPLKDARVILK 670
Query: 126 RSY 128
+ Y
Sbjct: 671 KRY 673
>UNIPROTKB|B4JNS2 [details] [associations]
symbol:GH24089 "Regulator of telomere elongation helicase 1
homolog" species:7222 "Drosophila grimshawi" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 EMBL:CH916371 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 KO:K11136 OMA:PFPPLKD
OrthoDB:EOG4S4MX7 RefSeq:XP_001992658.1 EnsemblMetazoa:FBtr0159503
GeneID:6565576 KEGG:dgr:Dgri_GH24089 FlyBase:FBgn0131545
InParanoid:B4JNS2 Uniprot:B4JNS2
Length = 986
Score = 193 (73.0 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 42/119 (35%), Positives = 65/119 (54%)
Query: 18 PNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTS 77
P+ N C W ++GL I K ++ EPR D+ + M ++ AI+ ++
Sbjct: 563 PSYPMLNQCVDAWQASGLWADISSRKPIFLEPRGKDQFTSTMEEFYQAIRDSK------- 615
Query: 78 EKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
GA + RGK+SEG+DFAD R+VI G+PFP ++D KV LKR Y +T+ ++
Sbjct: 616 ----GACFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLETNRTRE 670
>UNIPROTKB|B4M891 [details] [associations]
symbol:GJ16649 "Regulator of telomere elongation helicase 1
homolog" species:7244 "Drosophila virilis" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 EMBL:CH940653 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
RefSeq:XP_002056881.1 EnsemblMetazoa:FBtr0232574 GeneID:6633257
KEGG:dvi:Dvir_GJ16649 FlyBase:FBgn0203833 InParanoid:B4M891
Uniprot:B4M891
Length = 1005
Score = 193 (73.0 bits), Expect = 5.8e-14, P = 5.8e-14
Identities = 43/119 (36%), Positives = 65/119 (54%)
Query: 18 PNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTS 77
P+ N C W ++GL I K ++ EPR D+ + M ++ AI+ ++
Sbjct: 562 PSYPMLNQCVDAWQASGLWADISCRKPIFLEPRGKDQFTSTMEEFYQAIRDSK------- 614
Query: 78 EKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
GA + RGK+SEG+DFAD R+VI G+PFP ++D KV LKR Y +T+ K+
Sbjct: 615 ----GACFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVVLKRRYLETNRTKE 669
>MGI|MGI:2443590 [details] [associations]
symbol:Ddx11 "DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0000922 "spindle pole" evidence=ISO] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0030496 "midbody" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 MGI:MGI:2443590 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005730 GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0003723 GO:GO:0000790 GO:GO:0004003
GO:GO:0004386 GO:GO:0030496 GO:GO:0000922 GO:GO:0008094
eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
HOGENOM:HOG000241266 OMA:NLGRCVV GeneTree:ENSGT00530000063199
GO:GO:0007062 HOVERGEN:HBG058884 OrthoDB:EOG4B5P4M CTD:1663
EMBL:BC079656 IPI:IPI00460651 RefSeq:NP_001003919.1
UniGene:Mm.259605 ProteinModelPortal:Q6AXC6 SMR:Q6AXC6
STRING:Q6AXC6 PhosphoSite:Q6AXC6 PRIDE:Q6AXC6
Ensembl:ENSMUST00000163605 GeneID:320209 KEGG:mmu:320209
UCSC:uc008dha.1 InParanoid:Q6AXC6 NextBio:396263 Bgee:Q6AXC6
Genevestigator:Q6AXC6 GermOnline:ENSMUSG00000035842 Uniprot:Q6AXC6
Length = 880
Score = 192 (72.6 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 40/121 (33%), Positives = 70/121 (57%)
Query: 12 GSTARIPNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAEL 71
G +P+ + W TGL+ R+ K ++ EP+R ++E V++ Y I +
Sbjct: 674 GVVCFLPSYEYLRQVHAHWDKTGLLTRLSVRKKIFQEPKRASQVEQVLMAYSKCI----M 729
Query: 72 RSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY-ND 130
S++ TGALL ++ GK+SEGI+F+D+ R V+ VG+P+P+I+ +++ K +Y N
Sbjct: 730 SCSHSEGHLTGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEKMAYLNQ 789
Query: 131 T 131
T
Sbjct: 790 T 790
>UNIPROTKB|F1NN99 [details] [associations]
symbol:DDX11 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0030496 "midbody"
evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0003677
GO:GO:0000790 GO:GO:0004003 GO:GO:0030496 GO:GO:0000922
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 OMA:NLGRCVV
GeneTree:ENSGT00530000063199 GO:GO:0007062 EMBL:AADN02006472
EMBL:AADN02006473 IPI:IPI00575083 IntAct:F1NN99
Ensembl:ENSGALT00000021158 Uniprot:F1NN99
Length = 908
Score = 190 (71.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 40/119 (33%), Positives = 67/119 (56%)
Query: 12 GSTARIPNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAEL 71
G P+ D W TGL+ R+ K ++ EP++ +++E V+ Y IK
Sbjct: 707 GVVCFFPSYDYEKQVYAHWEKTGLLTRLATKKKIFQEPKKANQVEQVLAEYAKCIK---- 762
Query: 72 RSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
R + TGALL ++ GK+SEGI+F+D+ R VI VG+P+P+I+ +++ K ++ D
Sbjct: 763 RCGQAGGQMTGALLLSVVGGKMSEGINFSDDLGRCVIMVGMPYPNIKSPELQEKMTWLD 821
>UNIPROTKB|B4PZB4 [details] [associations]
symbol:GE16425 "Regulator of telomere elongation helicase 1
homolog" species:7245 "Drosophila yakuba" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CM000162 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_002099973.1
EnsemblMetazoa:FBtr0262943 GeneID:6524109 KEGG:dya:Dyak_GE16425
FlyBase:FBgn0233951 Uniprot:B4PZB4
Length = 985
Score = 190 (71.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 41/119 (34%), Positives = 65/119 (54%)
Query: 18 PNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTS 77
P+ N C W ++GL I K ++ EPR D+ + M ++ AI+ ++
Sbjct: 562 PSYPMLNKCVDAWQASGLWADISVKKPIFLEPRSKDQFTSTMEEFYQAIRDSK------- 614
Query: 78 EKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
GA+ + RGK+SEG+DFAD R+VI G+PFP ++D KV LKR Y + + ++
Sbjct: 615 ----GAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTRE 669
>UNIPROTKB|B3MSG8 [details] [associations]
symbol:GF20802 "Regulator of telomere elongation helicase 1
homolog" species:7217 "Drosophila ananassae" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
EMBL:CH902622 KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_001964274.1
EnsemblMetazoa:FBtr0125502 GeneID:6503494 KEGG:dan:Dana_GF20802
FlyBase:FBgn0097808 InParanoid:B3MSG8 Uniprot:B3MSG8
Length = 994
Score = 190 (71.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 41/119 (34%), Positives = 65/119 (54%)
Query: 18 PNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTS 77
P+ N C W ++GL I K ++ EPR D+ + M ++ AI+ ++
Sbjct: 562 PSYPMLNKCVDAWQASGLWADIASKKPIFLEPRGKDQFTSTMEEFYQAIRDSK------- 614
Query: 78 EKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
GA + RGK+SEG+DFAD R+VI G+PFP ++D KV LKR Y +++ ++
Sbjct: 615 ----GACFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLESNRTRE 669
>UNIPROTKB|B4I0K4 [details] [associations]
symbol:GM12432 "Regulator of telomere elongation helicase 1
homolog" species:7238 "Drosophila sechellia" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 EMBL:CH480819 GO:GO:0010569
TIGRFAMs:TIGR00604 KO:K11136 OrthoDB:EOG4S4MX7
RefSeq:XP_002036876.1 EnsemblMetazoa:FBtr0195417 GeneID:6612367
KEGG:dse:Dsec_GM12432 FlyBase:FBgn0167369 Uniprot:B4I0K4
Length = 966
Score = 188 (71.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 41/119 (34%), Positives = 65/119 (54%)
Query: 18 PNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTS 77
P+ N C W ++GL I K ++ EPR D+ + M ++ AI+ ++
Sbjct: 543 PSYPMLNKCVDAWQASGLWADISCKKPIFLEPRSKDQFTSTMEEFYQAIRDSK------- 595
Query: 78 EKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
GA+ + RGK+SEG+DFAD R+VI G+PFP ++D KV LKR Y + + ++
Sbjct: 596 ----GAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTRE 650
>FB|FBgn0029798 [details] [associations]
symbol:CG4078 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0006289 "nucleotide-excision repair" evidence=ISS] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 EMBL:AE014298 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 KO:K11136 OMA:PFPPLKD
OrthoDB:EOG4S4MX7 EMBL:BT021290 EMBL:EU217688 EMBL:EU217689
EMBL:EU217690 EMBL:EU217691 EMBL:EU217692 EMBL:EU217693
EMBL:EU217694 EMBL:EU217695 EMBL:EU217696 EMBL:EU217697
EMBL:EU217698 EMBL:EU217699 RefSeq:NP_572254.1 UniGene:Dm.11709
ProteinModelPortal:Q9W484 SMR:Q9W484 IntAct:Q9W484
MINT:MINT-4080348 PaxDb:Q9W484 PRIDE:Q9W484
EnsemblMetazoa:FBtr0070807 EnsemblMetazoa:FBtr0332398 GeneID:31497
KEGG:dme:Dmel_CG4078 UCSC:CG4078-RA FlyBase:FBgn0029798
InParanoid:Q9W484 PhylomeDB:Q9W484 GenomeRNAi:31497 NextBio:773915
Bgee:Q9W484 Uniprot:Q9W484
Length = 985
Score = 188 (71.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 41/119 (34%), Positives = 65/119 (54%)
Query: 18 PNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTS 77
P+ N C W ++GL I K ++ EPR D+ + M ++ AI+ ++
Sbjct: 562 PSYPMLNKCVDAWQASGLWADISCKKPIFLEPRSKDQFTSTMEEFYQAIRDSK------- 614
Query: 78 EKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
GA+ + RGK+SEG+DFAD R+VI G+PFP ++D KV LKR Y + + ++
Sbjct: 615 ----GAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTRE 669
>UNIPROTKB|B3NSW1 [details] [associations]
symbol:GG18780 "Regulator of telomere elongation helicase 1
homolog" species:7220 "Drosophila erecta" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 GO:GO:0010569 TIGRFAMs:TIGR00604 EMBL:CH954180
KO:K11136 OrthoDB:EOG4S4MX7 RefSeq:XP_001977003.1
EnsemblMetazoa:FBtr0138834 GeneID:6550838 KEGG:der:Dere_GG18780
FlyBase:FBgn0110988 Uniprot:B3NSW1
Length = 985
Score = 188 (71.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 41/119 (34%), Positives = 65/119 (54%)
Query: 18 PNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTS 77
P+ N C W ++GL I K ++ EPR D+ + M ++ AI+ ++
Sbjct: 562 PSYPMLNKCVDAWQASGLWADISCKKPIFLEPRSKDQFTSTMEEFYQAIRDSK------- 614
Query: 78 EKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
GA+ + RGK+SEG+DFAD R+VI G+PFP ++D KV LKR Y + + ++
Sbjct: 615 ----GAVFMAVCRGKVSEGLDFADRNGRAVIITGLPFPPLKDPKVILKRRYLEANRTRE 669
>UNIPROTKB|B4NDG5 [details] [associations]
symbol:GK24923 "Regulator of telomere elongation helicase 1
homolog" species:7260 "Drosophila willistoni" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 InterPro:IPR014001
SMART:SM00487 EMBL:CH964239 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K11136 OMA:PFPPLKD OrthoDB:EOG4S4MX7
RefSeq:XP_002071885.1 STRING:B4NDG5 EnsemblMetazoa:FBtr0255574
GeneID:6648559 KEGG:dwi:Dwil_GK24923 FlyBase:FBgn0226882
InParanoid:B4NDG5 Uniprot:B4NDG5
Length = 998
Score = 187 (70.9 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 41/119 (34%), Positives = 63/119 (52%)
Query: 18 PNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTS 77
P+ N C W ++GL I K ++ EPR D+ M ++ AI+ ++
Sbjct: 568 PSYPMLNKCVDAWQTSGLWADIAAKKPIFLEPRGKDQFTTTMEEFYQAIRDSK------- 620
Query: 78 EKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
GA + RGK+SEG+DFAD R+VI G+P+P ++D KV LKR Y + + K+
Sbjct: 621 ----GACFMAVCRGKVSEGLDFADRNGRAVIITGLPYPPLKDPKVILKRRYLEANRTKE 675
>UNIPROTKB|Q96FC9 [details] [associations]
symbol:DDX11 "Probable ATP-dependent RNA helicase DDX11"
species:9606 "Homo sapiens" [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007062 "sister chromatid
cohesion" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0000922
"spindle pole" evidence=IDA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0004386 "helicase activity"
evidence=IDA] [GO:0000086 "G2/M transition of mitotic cell cycle"
evidence=TAS] [GO:0000070 "mitotic sister chromatid segregation"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=TAS]
[GO:0008284 "positive regulation of cell proliferation"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006987
"activation of signaling protein activity involved in unfolded
protein response" evidence=TAS] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=TAS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 Reactome:REACT_116125 GO:GO:0000086 GO:GO:0019048
GO:GO:0005654 GO:GO:0006987 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008284 GO:GO:0051539 GO:GO:0003723
GO:GO:0000790 GO:GO:0000070 GO:GO:0004003 GO:GO:0030496
GO:GO:0000922 GO:GO:0000084 GO:GO:0003678 GO:GO:0008094
eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
CleanEx:HS_CHL1 OMA:NLGRCVV GO:GO:0007062 HOVERGEN:HBG058884
OrthoDB:EOG4B5P4M EMBL:X99583 EMBL:U33833 EMBL:U75967 EMBL:U75968
EMBL:BC050069 EMBL:BC050522 IPI:IPI00012188 IPI:IPI00332293
IPI:IPI00657836 IPI:IPI00658184 IPI:IPI00942296 PIR:G02071
RefSeq:NP_001244073.1 RefSeq:NP_001244074.1 RefSeq:NP_004390.3
RefSeq:NP_689651.1 UniGene:Hs.443960 ProteinModelPortal:Q96FC9
SMR:Q96FC9 IntAct:Q96FC9 MINT:MINT-1371028 STRING:Q96FC9
PhosphoSite:Q96FC9 DMDM:74731686 PaxDb:Q96FC9 PRIDE:Q96FC9
DNASU:1663 Ensembl:ENST00000228264 Ensembl:ENST00000251758
Ensembl:ENST00000350437 Ensembl:ENST00000407793
Ensembl:ENST00000435753 Ensembl:ENST00000542838
Ensembl:ENST00000545668 GeneID:1663 KEGG:hsa:1663 UCSC:uc001rjr.1
UCSC:uc001rjs.1 UCSC:uc001rjt.1 UCSC:uc001rju.1 CTD:1663
GeneCards:GC12P031226 HGNC:HGNC:2736 MIM:601150 MIM:613398
neXtProt:NX_Q96FC9 Orphanet:280558 PharmGKB:PA27201
InParanoid:Q96FC9 PhylomeDB:Q96FC9 GenomeRNAi:1663 NextBio:6842
ArrayExpress:Q96FC9 Bgee:Q96FC9 CleanEx:HS_DDX11
Genevestigator:Q96FC9 GermOnline:ENSG00000013573 Uniprot:Q96FC9
Length = 970
Score = 185 (70.2 bits), Expect = 4.0e-13, P = 4.0e-13
Identities = 40/125 (32%), Positives = 66/125 (52%)
Query: 7 CWLIRGSTARI-PNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTA 65
C ++ G P+ + W GL+ R+ K ++ EP+ ++E V+L Y
Sbjct: 696 CGVVPGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSRC 755
Query: 66 IKQAELRSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLK 125
I+ TGALL ++ GK+SEGI+F+DN R V+ VG+PFP+I+ +++ K
Sbjct: 756 IQACGQERGQV----TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEK 811
Query: 126 RSYND 130
+Y D
Sbjct: 812 MAYLD 816
>UNIPROTKB|E2RGR5 [details] [associations]
symbol:DDX11 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030496 "midbody" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0003677
GO:GO:0000790 GO:GO:0004003 GO:GO:0030496 GO:GO:0000922
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 OMA:NLGRCVV
GeneTree:ENSGT00530000063199 GO:GO:0007062 EMBL:AAEX03015316
Ensembl:ENSCAFT00000024894 Uniprot:E2RGR5
Length = 908
Score = 183 (69.5 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 40/125 (32%), Positives = 72/125 (57%)
Query: 7 CWLIRGSTARI-PNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTA 65
C ++ G P+ + W +GL+ R+ K ++ EP+R +++E V++ Y
Sbjct: 698 CTVVPGGVVCFFPSYEYQRQVYAHWDKSGLLARLAVRKKIFQEPKRANQVEQVLMEYSRC 757
Query: 66 IKQAELRSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLK 125
IK ++ T TGALL ++ GK+SEGI+F+D+ R V+ VG+P+P+I+ +++ K
Sbjct: 758 IKCCG-QAGGTV---TGALLLSVVGGKMSEGINFSDDLGRCVVMVGMPYPNIKSPELQEK 813
Query: 126 RSYND 130
+Y D
Sbjct: 814 MAYLD 818
>UNIPROTKB|Q92771 [details] [associations]
symbol:DDX12P "Putative ATP-dependent RNA helicase DDX12"
species:9606 "Homo sapiens" [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003723 GO:GO:0007049
GO:GO:0004003 PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
HOGENOM:HOG000241266 HOVERGEN:HBG058884 EMBL:AC092821 EMBL:AC141557
EMBL:U33834 IPI:IPI00023299 UniGene:Hs.447869 UniGene:Hs.504688
ProteinModelPortal:Q92771 SMR:Q92771 STRING:Q92771
PhosphoSite:Q92771 DMDM:182705254 PRIDE:Q92771
GeneCards:GC12M009720 HGNC:HGNC:2737 MIM:601151 neXtProt:NX_Q92771
InParanoid:Q92771 ArrayExpress:Q92771 CleanEx:HS_DDX12
Genevestigator:Q92771 Uniprot:Q92771
Length = 950
Score = 182 (69.1 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 39/125 (31%), Positives = 66/125 (52%)
Query: 7 CWLIRGSTARI-PNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTA 65
C ++ G P+ + W GL+ R+ K ++ EP+ ++E V+L Y
Sbjct: 715 CGVVSGGVVCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSRC 774
Query: 66 IKQAELRSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLK 125
++ TGALL ++ GK+SEGI+F+DN R V+ VG+PFP+I+ +++ K
Sbjct: 775 LQACGQERGPV----TGALLLSVVGGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEK 830
Query: 126 RSYND 130
+Y D
Sbjct: 831 MAYLD 835
>UNIPROTKB|F1SK84 [details] [associations]
symbol:DDX11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030496 "midbody" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0000922 "spindle pole"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0003677
GO:GO:0000790 GO:GO:0004003 GO:GO:0030496 GO:GO:0000922
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 GO:GO:0007062 EMBL:CU861969
Ensembl:ENSSSCT00000000809 OMA:HQISKRD Uniprot:F1SK84
Length = 682
Score = 179 (68.1 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 38/119 (31%), Positives = 65/119 (54%)
Query: 12 GSTARIPNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAEL 71
G P+ + W +GL+ R+ K ++ EP+R +++E V+ Y IK
Sbjct: 472 GVVCFFPSYEYQRQVHAHWDRSGLLARLAVRKKIFQEPKRANQVEQVLKEYSRCIKHC-- 529
Query: 72 RSSNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
TGALL ++ GK+SEGI+F+D+ R V+ VG+P+P+I+ +++ K +Y D
Sbjct: 530 --GQAEGMVTGALLLSVVGGKMSEGINFSDSLGRCVVMVGMPYPNIRSAELQEKMAYLD 586
>ZFIN|ZDB-GENE-050306-11 [details] [associations]
symbol:rtel1 "regulator of telomere elongation
helicase 1" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
ZFIN:ZDB-GENE-050306-11 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 KO:K11136 CTD:51750 EMBL:BX004876
IPI:IPI01016862 RefSeq:NP_001013328.2 UniGene:Dr.87074
ProteinModelPortal:F1QNW3 Ensembl:ENSDART00000123445 GeneID:503732
KEGG:dre:503732 NextBio:20866277 Bgee:F1QNW3 Uniprot:F1QNW3
Length = 1177
Score = 181 (68.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 41/107 (38%), Positives = 55/107 (51%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W + G DRI VK ++ EPR V+ GY+ ++ N+S G F +
Sbjct: 572 WRAKGHADRIENVKPMFVEPRGKGTFTEVIDGYY-----GKVDDPNSS----GGSFFAVC 622
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
RGK SEG+DFAD Y R V+ G+PFP D +V LK Y D + K
Sbjct: 623 RGKASEGLDFADTYGRGVVITGLPFPPRMDPRVVLKMQYLDEMCRNK 669
>WB|WBGene00009124 [details] [associations]
symbol:rtel-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
EMBL:Z79754 KO:K11136 OMA:PFPPLKD HOGENOM:HOG000154218 EMBL:Z83224
PIR:T21356 RefSeq:NP_492769.1 ProteinModelPortal:Q93575 SMR:Q93575
IntAct:Q93575 MINT:MINT-227415 STRING:Q93575 PaxDb:Q93575
EnsemblMetazoa:F25H2.13.1 EnsemblMetazoa:F25H2.13.2 GeneID:172946
KEGG:cel:CELE_F25H2.13 UCSC:F25H2.13 CTD:172946 WormBase:F25H2.13
InParanoid:Q93575 NextBio:877635 Uniprot:Q93575
Length = 994
Score = 177 (67.4 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 42/105 (40%), Positives = 60/105 (57%)
Query: 29 RWSSTG---LMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALL 85
+WSS +++ + K V EPR +EL + L Y + SE++ GA L
Sbjct: 588 KWSSNSNESFWEKMEKTKRVVVEPRAKEELAAIRLRY----------TQGVSEQH-GAAL 636
Query: 86 FTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
+ RGK+SEGIDF D +R+VI +GIP+P I DE+V LK+ Y D
Sbjct: 637 LAVCRGKVSEGIDFCDAESRAVIIIGIPYPPIHDERVVLKKMYLD 681
>UNIPROTKB|Q93575 [details] [associations]
symbol:rtel-1 "Regulator of telomere elongation helicase 1
homolog" species:6239 "Caenorhabditis elegans" [GO:0005634
"nucleus" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=IGI] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199 EMBL:Z79754
KO:K11136 OMA:PFPPLKD HOGENOM:HOG000154218 EMBL:Z83224 PIR:T21356
RefSeq:NP_492769.1 ProteinModelPortal:Q93575 SMR:Q93575
IntAct:Q93575 MINT:MINT-227415 STRING:Q93575 PaxDb:Q93575
EnsemblMetazoa:F25H2.13.1 EnsemblMetazoa:F25H2.13.2 GeneID:172946
KEGG:cel:CELE_F25H2.13 UCSC:F25H2.13 CTD:172946 WormBase:F25H2.13
InParanoid:Q93575 NextBio:877635 Uniprot:Q93575
Length = 994
Score = 177 (67.4 bits), Expect = 2.9e-12, P = 2.9e-12
Identities = 42/105 (40%), Positives = 60/105 (57%)
Query: 29 RWSSTG---LMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALL 85
+WSS +++ + K V EPR +EL + L Y + SE++ GA L
Sbjct: 588 KWSSNSNESFWEKMEKTKRVVVEPRAKEELAAIRLRY----------TQGVSEQH-GAAL 636
Query: 86 FTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
+ RGK+SEGIDF D +R+VI +GIP+P I DE+V LK+ Y D
Sbjct: 637 LAVCRGKVSEGIDFCDAESRAVIIIGIPYPPIHDERVVLKKMYLD 681
>UNIPROTKB|A8MPP1 [details] [associations]
symbol:DDX11L8 "Putative ATP-dependent RNA helicase
DDX11-like protein 8" species:9606 "Homo sapiens" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0003723 GO:GO:0004003 eggNOG:COG1199
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 EMBL:AC009533
IPI:IPI00872853 ProteinModelPortal:A8MPP1 SMR:A8MPP1 STRING:A8MPP1
PhosphoSite:A8MPP1 PaxDb:A8MPP1 PRIDE:A8MPP1 GeneCards:GC12M000095
HGNC:HGNC:37101 neXtProt:NX_A8MPP1 HOVERGEN:HBG058884
InParanoid:A8MPP1 OrthoDB:EOG4B5P4M Genevestigator:A8MPP1
Uniprot:A8MPP1
Length = 907
Score = 176 (67.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 36/101 (35%), Positives = 59/101 (58%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W GL+ R+ K ++ EP+ ++E V+L Y I+ +E ALL ++
Sbjct: 721 WEKGGLLGRLAARKKIFQEPKSAHQVEQVLLAYSRCIQACGQERGQVTE----ALLLSVV 776
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
GK+SEGI+F+DN R V+ VG+PFP+I+ +++ K +Y D
Sbjct: 777 GGKMSEGINFSDNLGRCVVMVGMPFPNIRSAELQEKMAYLD 817
>TAIR|locus:2017894 [details] [associations]
symbol:AT1G79890 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006310 "DNA
recombination" evidence=RCA] [GO:0007059 "chromosome segregation"
evidence=RCA] [GO:0007126 "meiosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] InterPro:IPR002464
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 EMBL:AC011717
UniGene:At.18069 eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5
TIGRFAMs:TIGR00604 HOGENOM:HOG000241266 OMA:NLGRCVV IPI:IPI00530666
PIR:A96830 RefSeq:NP_178107.1 UniGene:At.66890
ProteinModelPortal:Q9CA92 SMR:Q9CA92 STRING:Q9CA92 PaxDb:Q9CA92
PRIDE:Q9CA92 EnsemblPlants:AT1G79890.1 GeneID:844328
KEGG:ath:AT1G79890 TAIR:At1g79890 InParanoid:Q9CA92
PhylomeDB:Q9CA92 ProtClustDB:CLSN2681868 Genevestigator:Q9CA92
Uniprot:Q9CA92
Length = 882
Score = 168 (64.2 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 37/90 (41%), Positives = 58/90 (64%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
WS++G++ RI + K V+ EPR+N E+E V+ Y AI+ SE+ GA++ +
Sbjct: 662 WSNSGILRRIVKKKRVFREPRKNTEVEAVLRDYKEAIE---------SER--GAIMLAVV 710
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQD 119
GK+SEGI+F+D+ R V+ VG+P+PS D
Sbjct: 711 GGKVSEGINFSDSMCRCVVMVGLPYPSPSD 740
>UNIPROTKB|A8WS58 [details] [associations]
symbol:rtel-1 "Regulator of telomere elongation helicase 1
homolog" species:6238 "Caenorhabditis briggsae" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K11136 EMBL:HE601486 RefSeq:XP_002639805.1
EnsemblMetazoa:CBG02256 GeneID:8581799 KEGG:cbr:CBG02256
CTD:8581799 WormBase:CBG02256 HOGENOM:HOG000154218 OMA:ENDIENQ
Uniprot:A8WS58
Length = 994
Score = 166 (63.5 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 39/94 (41%), Positives = 55/94 (58%)
Query: 37 DRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIFRGKISEG 96
+++ + K + EPR ++L V L Y + SE + GA L + RGK+SEG
Sbjct: 598 EKMEKTKKIAVEPRAKEQLAAVRLRY----------TQGVSEPH-GAALLAVCRGKVSEG 646
Query: 97 IDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
IDF D +R+VI VGIP+P I DE+V LK+ Y D
Sbjct: 647 IDFCDAESRAVIIVGIPYPPIHDERVVLKKMYLD 680
>CGD|CAL0004313 [details] [associations]
symbol:orf19.2000 species:5476 "Candida albicans" [GO:0003678
"DNA helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007535
"donor selection" evidence=IEA] [GO:0045910 "negative regulation of
DNA recombination" evidence=IEA] [GO:0006270 "DNA replication
initiation" evidence=IEA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IEA] InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0007049
GO:GO:0004003 EMBL:AACQ01000031 EMBL:AACQ01000030
RefSeq:XP_719450.1 RefSeq:XP_719578.1 ProteinModelPortal:Q5AD67
STRING:Q5AD67 GeneID:3638692 GeneID:3638794 KEGG:cal:CaO19.2000
KEGG:cal:CaO19.9551 eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5
TIGRFAMs:TIGR00604 Uniprot:Q5AD67
Length = 842
Score = 156 (60.0 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 36/102 (35%), Positives = 59/102 (57%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W T ++ I K+++ EP+ +E V+ Y I+ T K GA+LF++
Sbjct: 655 WRDTKILTSIESEKTIFREPKDPSNVEKVLNEYGYLIQ--------TERK--GAILFSVV 704
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDT 131
GK+SEGI+F+D+ AR+VI VG+P+P+ ++ KR Y +T
Sbjct: 705 GGKMSEGINFSDDLARAVIMVGLPYPNAYSGEMVTKRKYIET 746
>TAIR|locus:2016209 [details] [associations]
symbol:AT1G79950 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] InterPro:IPR003822 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020 EMBL:CP002684
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
TIGRFAMs:TIGR00604 Gene3D:1.20.1160.11 SUPFAM:SSF47762 KO:K11136
OMA:PFPPLKD IPI:IPI00530732 RefSeq:NP_178113.3 UniGene:At.34013
ProteinModelPortal:F4HQE2 SMR:F4HQE2 PRIDE:F4HQE2
EnsemblPlants:AT1G79950.1 GeneID:844335 KEGG:ath:AT1G79950
ArrayExpress:F4HQE2 Uniprot:F4HQE2
Length = 1040
Score = 153 (58.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 39/111 (35%), Positives = 60/111 (54%)
Query: 24 NGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGA 83
NGC R S T + +RI ++K EP+ + M + +L+ TS G
Sbjct: 585 NGC-YRNSMT-VWERICKLKKPVIEPKDSSLFPAAMRDF-----SEKLQDRATS----GV 633
Query: 84 LLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQ 134
+ F + RGK+SEG+DFAD R+V+ G+P+ + D +VKLKR + D +Q
Sbjct: 634 VFFAVCRGKVSEGLDFADGAGRAVVITGLPYARVTDPRVKLKREFLDEQSQ 684
>UNIPROTKB|H0YFY8 [details] [associations]
symbol:DDX11 "Probable ATP-dependent RNA helicase DDX11"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=IEA] InterPro:IPR006555
InterPro:IPR027076 Pfam:PF13307 SMART:SM00491 GO:GO:0005524
GO:GO:0003676 GO:GO:0008026 PANTHER:PTHR11472:SF5 HGNC:HGNC:2736
EMBL:AC008013 Ensembl:ENST00000539702 Uniprot:H0YFY8
Length = 172
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 31/81 (38%), Positives = 52/81 (64%)
Query: 54 ELENVMLGYFTAIK-QAELRSSNTSEKN---TGALLFTIFRGKISEGIDFADNYARSVIS 109
++E V+L Y I+ +A + ++ TGALL ++ GK+SEGI+F+DN R V+
Sbjct: 2 QVEQVLLAYSRCIQVRASCWAWACGQERGQVTGALLLSVVGGKMSEGINFSDNLGRCVVM 61
Query: 110 VGIPFPSIQDEKVKLKRSYND 130
VG+PFP+I+ +++ K +Y D
Sbjct: 62 VGMPFPNIRSAELQEKMAYLD 82
>UNIPROTKB|E1BTS7 [details] [associations]
symbol:Gga.49055 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:AADN02019151 EMBL:AADN02019152
EMBL:AADN02019153 IPI:IPI00819960 Ensembl:ENSGALT00000039433
ArrayExpress:E1BTS7 Uniprot:E1BTS7
Length = 1085
Score = 152 (58.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 36/99 (36%), Positives = 47/99 (47%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W RI EVK ++ EPR VM Y++ I K+ GA +
Sbjct: 575 WREHDFAKRIEEVKPMFVEPRNKGSFAEVMDAYYSKI---------ACPKSNGAAFLAVC 625
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK SEG+DFAD R VI G+PFP + +V LK +
Sbjct: 626 RGKASEGLDFADMNGRGVIITGLPFPPRWEPRVVLKMQF 664
>UNIPROTKB|E1BTS6 [details] [associations]
symbol:Gga.49055 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 EMBL:AADN02019151 EMBL:AADN02019152
EMBL:AADN02019153 IPI:IPI00822587 Ensembl:ENSGALT00000039434
ArrayExpress:E1BTS6 Uniprot:E1BTS6
Length = 1124
Score = 152 (58.6 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 36/99 (36%), Positives = 47/99 (47%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W RI EVK ++ EPR VM Y++ I K+ GA +
Sbjct: 575 WREHDFAKRIEEVKPMFVEPRNKGSFAEVMDAYYSKI---------ACPKSNGAAFLAVC 625
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK SEG+DFAD R VI G+PFP + +V LK +
Sbjct: 626 RGKASEGLDFADMNGRGVIITGLPFPPRWEPRVVLKMQF 664
>UNIPROTKB|F1NE49 [details] [associations]
symbol:Gga.49055 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000723 "telomere maintenance"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 GO:GO:0000723
TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199 OMA:VLKMQFL
EMBL:AADN02019151 EMBL:AADN02019152 EMBL:AADN02019153
IPI:IPI00597328 Ensembl:ENSGALT00000009881 ArrayExpress:F1NE49
Uniprot:F1NE49
Length = 1127
Score = 152 (58.6 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 36/99 (36%), Positives = 47/99 (47%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W RI EVK ++ EPR VM Y++ I K+ GA +
Sbjct: 577 WREHDFAKRIEEVKPMFVEPRNKGSFAEVMDAYYSKI---------ACPKSNGAAFLAVC 627
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK SEG+DFAD R VI G+PFP + +V LK +
Sbjct: 628 RGKASEGLDFADMNGRGVIITGLPFPPRWEPRVVLKMQF 666
>UNIPROTKB|D4ACH4 [details] [associations]
symbol:Rtel1 "Regulator of telomere elongation helicase 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR006935 InterPro:IPR010614 InterPro:IPR014013
Pfam:PF04851 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
IPI:IPI00781945 Ensembl:ENSRNOT00000029336 ArrayExpress:D4ACH4
Uniprot:D4ACH4
Length = 1165
Score = 146 (56.5 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W + G+ ++ +K ++ EPR V+ Y+ +Q SN GA +
Sbjct: 573 WQAQGMSKKVEALKPLFVEPRNKGSFSEVIDAYY---QQVASPGSN------GATFLAVC 623
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
RGK SEG+DF+D R VI G+P+P D +V LK + D
Sbjct: 624 RGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVILKMQFLD 664
>UNIPROTKB|Q6H1L8 [details] [associations]
symbol:Rtel1 "Regulator of telomere elongation helicase 1"
species:10096 "Mus spretus" [GO:0000723 "telomere maintenance"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0010569 "regulation of double-strand
break repair via homologous recombination" evidence=ISS]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 MGI:MGI:2139369
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0051539 GO:GO:0004003
GO:GO:0000723 GO:GO:0010569 TIGRFAMs:TIGR00604 EMBL:AY481613
EMBL:AY481614 EMBL:AY481615 EMBL:AY481616 EMBL:AY481617
EMBL:AY530632 ProteinModelPortal:Q6H1L8 Uniprot:Q6H1L8
Length = 1203
Score = 146 (56.5 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W GL ++ +K ++ EPR V+ Y+ +Q +SN GA +
Sbjct: 573 WQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYY---QQVASPASN------GATFLAVC 623
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
RGK SEG+DF+D R VI G+P+P D +V LK + D
Sbjct: 624 RGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFLD 664
>MGI|MGI:2139369 [details] [associations]
symbol:Rtel1 "regulator of telomere elongation helicase 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0006139 "nucleobase-containing compound
metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0010569 "regulation of double-strand break repair
via homologous recombination" evidence=ISO] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 MGI:MGI:2139369
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0051539 GO:GO:0004003
InterPro:IPR014001 SMART:SM00487 GO:GO:0000723 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 GeneTree:ENSGT00530000063199
KO:K11136 CTD:51750 EMBL:AY481619 EMBL:AY481620 EMBL:AY481621
EMBL:AY481622 EMBL:AY481623 EMBL:AK173097 EMBL:AK145145
EMBL:AL928965 EMBL:BC105578 EMBL:BC144977 EMBL:BC144978
EMBL:BC145658 IPI:IPI00274165 IPI:IPI00467288 IPI:IPI00754466
IPI:IPI00756345 IPI:IPI00756903 IPI:IPI00929860
RefSeq:NP_001001882.3 RefSeq:NP_001160137.1 RefSeq:NP_001160138.1
RefSeq:NP_001160139.1 RefSeq:NP_001160140.1 UniGene:Mm.11333
ProteinModelPortal:Q0VGM9 SMR:Q0VGM9 STRING:Q0VGM9
PhosphoSite:Q0VGM9 PRIDE:Q0VGM9 Ensembl:ENSMUST00000048608
Ensembl:ENSMUST00000054622 Ensembl:ENSMUST00000098971
Ensembl:ENSMUST00000108814 Ensembl:ENSMUST00000108815
Ensembl:ENSMUST00000148252 GeneID:269400 KEGG:mmu:269400
UCSC:uc008olu.2 UCSC:uc008olv.2 UCSC:uc008olw.2 UCSC:uc008olx.2
UCSC:uc012cmk.1 UCSC:uc012cml.1 InParanoid:Q6H1L3 OMA:VLKMQFL
ChiTaRS:RTEL1 NextBio:392832 Bgee:Q0VGM9 Genevestigator:Q0VGM9
Uniprot:Q0VGM9
Length = 1203
Score = 146 (56.5 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 34/101 (33%), Positives = 50/101 (49%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W GL ++ +K ++ EPR V+ Y+ +Q +SN GA +
Sbjct: 573 WQVQGLARKVEALKPLFVEPRNKGSFSEVIDAYY---QQVASPASN------GATFLAVC 623
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
RGK SEG+DF+D R VI G+P+P D +V LK + D
Sbjct: 624 RGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVVLKMQFLD 664
>RGD|1306721 [details] [associations]
symbol:Rtel1 "regulator of telomere elongation helicase 1"
species:10116 "Rattus norvegicus" [GO:0000723 "telomere
maintenance" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA;ISO;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISO;ISS] [GO:0005634 "nucleus" evidence=IEA;ISO;ISS]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0010569 "regulation of
double-strand break repair via homologous recombination"
evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR006935
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF04851 Pfam:PF06733
Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 RGD:1306721 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0006281
GO:GO:0051539 GO:GO:0004003 GO:GO:0000723 GO:GO:0010569
eggNOG:COG1199 TIGRFAMs:TIGR00604 EMBL:CH474066
HOGENOM:HOG000007558 KO:K11136 CTD:51750 OrthoDB:EOG412M4Q
EMBL:BC086436 IPI:IPI00781945 IPI:IPI00782143 RefSeq:NP_001178786.1
UniGene:Rn.98315 PRIDE:Q5RJZ1 GeneID:362288 KEGG:rno:362288
UCSC:RGD:1306721 NextBio:679364 ArrayExpress:Q5RJZ1
Genevestigator:Q5RJZ1 Uniprot:Q5RJZ1
Length = 1274
Score = 146 (56.5 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 33/101 (32%), Positives = 50/101 (49%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W + G+ ++ +K ++ EPR V+ Y+ +Q SN GA +
Sbjct: 573 WQAQGMSKKVEALKPLFVEPRNKGSFSEVIDAYY---QQVASPGSN------GATFLAVC 623
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
RGK SEG+DF+D R VI G+P+P D +V LK + D
Sbjct: 624 RGKASEGLDFSDMNGRGVIVTGLPYPPRMDPRVILKMQFLD 664
>UNIPROTKB|D6RA96 [details] [associations]
symbol:RTEL1-TNFRSF6B "Protein RTEL1-TNFRSF6B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 GO:GO:0005524
GO:GO:0003677 GO:GO:0004003 EMBL:AL121845 EMBL:AL353715
HOGENOM:HOG000007558 ProteinModelPortal:D6RA96 SMR:D6RA96
Ensembl:ENST00000492259 HGNC:HGNC:44095 ArrayExpress:D6RA96
Bgee:D6RA96 Uniprot:D6RA96
Length = 785
Score = 139 (54.0 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W + L ++ +K ++ EPR + Y+ + + +TGA +
Sbjct: 601 WRARDLARKMEALKPLFVEPRSKGSFSETISAYYARV---------AAPGSTGATFLAVC 651
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
RGK SEG+DF+D R VI G+P+P D +V LK + D
Sbjct: 652 RGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLD 692
>UNIPROTKB|F1MWN6 [details] [associations]
symbol:RTEL1 "Regulator of telomere elongation helicase 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 IPI:IPI00905335 EMBL:DAAA02036222
Ensembl:ENSBTAT00000052120 OMA:THEKEDE Uniprot:F1MWN6
Length = 564
Score = 135 (52.6 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W + ++ K ++ EPR VM ++ + E ++GA+ +
Sbjct: 440 WRARDFTRKLEVRKPLFVEPRSKGGFSEVMEAFYARVAAPE---------SSGAIFLAVC 490
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
RGK SEG+DFAD R VI G+P+P D +V LK + D
Sbjct: 491 RGKASEGLDFADVNGRGVIVTGLPYPPRMDPRVLLKMQFLD 531
>UNIPROTKB|Q9NZ71 [details] [associations]
symbol:RTEL1 "Regulator of telomere elongation helicase 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IMP] [GO:0000723 "telomere maintenance"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IMP] [GO:0010569 "regulation of double-strand
break repair via homologous recombination" evidence=IMP]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 EMBL:CH471077 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0051539 GO:GO:0004003
EMBL:AF217796 GO:GO:0000723 GO:GO:0010569 eggNOG:COG1199
TIGRFAMs:TIGR00604 EMBL:AL353715 KO:K11136 CTD:51750
OrthoDB:EOG412M4Q EMBL:AF217795 EMBL:AB029011 EMBL:AK000485
EMBL:AK302508 EMBL:AK299332 EMBL:AK304798 EMBL:AL080127
IPI:IPI00219849 IPI:IPI00413900 IPI:IPI00718800 IPI:IPI00745153
IPI:IPI00929254 IPI:IPI00929311 IPI:IPI00929712 IPI:IPI00929751
PIR:T12516 PIR:T45294 RefSeq:NP_057518.1 RefSeq:NP_116575.3
UniGene:Hs.434878 ProteinModelPortal:Q9NZ71 SMR:Q9NZ71
IntAct:Q9NZ71 STRING:Q9NZ71 PhosphoSite:Q9NZ71 DMDM:229462743
PaxDb:Q9NZ71 PRIDE:Q9NZ71 GeneID:51750 KEGG:hsa:51750
UCSC:uc002yfu.2 UCSC:uc002yfx.1 UCSC:uc011abd.2 UCSC:uc021wge.1
GeneCards:GC20P062289 HGNC:HGNC:15888 MIM:608833 neXtProt:NX_Q9NZ71
PharmGKB:PA134915625 HOVERGEN:HBG108423 InParanoid:Q9NZ71
GenomeRNAi:51750 NextBio:55835 ArrayExpress:Q9NZ71 Bgee:Q9NZ71
Genevestigator:Q9NZ71 GermOnline:ENSG00000026036 Uniprot:Q9NZ71
Length = 1219
Score = 139 (54.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W + L ++ +K ++ EPR + Y+ + + +TGA +
Sbjct: 573 WRARDLARKMEALKPLFVEPRSKGSFSETISAYYARV---------AAPGSTGATFLAVC 623
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
RGK SEG+DF+D R VI G+P+P D +V LK + D
Sbjct: 624 RGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLD 664
>UNIPROTKB|Q5RE34 [details] [associations]
symbol:RTEL1 "Regulator of telomere elongation helicase 1"
species:9601 "Pongo abelii" [GO:0000723 "telomere maintenance"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0010569 "regulation of double-strand
break repair via homologous recombination" evidence=ISS]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 GO:GO:0000723
GO:GO:0010569 TIGRFAMs:TIGR00604 KO:K11136 CTD:51750 EMBL:CR857704
RefSeq:NP_001124929.1 UniGene:Pab.2365 ProteinModelPortal:Q5RE34
GeneID:100171800 KEGG:pon:100171800 Uniprot:Q5RE34
Length = 1302
Score = 139 (54.0 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W + L ++ +K ++ EPR + Y+ + + +TGA +
Sbjct: 574 WRARDLARKMEALKPLFVEPRSKGSFSETISAYYARV---------AAPGSTGATFLAVC 624
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
RGK SEG+DF+D R VI G+P+P D +V LK + D
Sbjct: 625 RGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLD 665
>UNIPROTKB|F6WH68 [details] [associations]
symbol:RTEL1 "Protein RTEL1-TNFRSF6B" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 EMBL:AL121845
TIGRFAMs:TIGR00604 EMBL:AL353715 HGNC:HGNC:15888 OMA:VLKMQFL
HGNC:HGNC:44095 IPI:IPI01021192 SMR:F6WH68 Ensembl:ENST00000318100
Ensembl:ENST00000482936 Uniprot:F6WH68
Length = 1400
Score = 139 (54.0 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 30/101 (29%), Positives = 48/101 (47%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W + L ++ +K ++ EPR + Y+ + + +TGA +
Sbjct: 573 WRARDLARKMEALKPLFVEPRSKGSFSETISAYYARV---------AAPGSTGATFLAVC 623
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
RGK SEG+DF+D R VI G+P+P D +V LK + D
Sbjct: 624 RGKASEGLDFSDTNGRGVIVTGLPYPPRMDPRVVLKMQFLD 664
>UNIPROTKB|E2RLA6 [details] [associations]
symbol:RTEL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604
GeneTree:ENSGT00530000063199 OMA:VLKMQFL EMBL:AAEX03014162
EMBL:AAEX03014163 Ensembl:ENSCAFT00000020689 Uniprot:E2RLA6
Length = 1232
Score = 137 (53.3 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 32/101 (31%), Positives = 47/101 (46%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W + ++ +K V+ EPR V+ Y+ + +TGA +
Sbjct: 572 WRTHDSAGKLEALKPVFVEPRNKGGFSEVVDAYYARV---------ACPGSTGATFLAVC 622
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
RGK SEG+DFAD R VI G+P+P D +V LK + D
Sbjct: 623 RGKASEGLDFADMNGRGVIITGLPYPPRMDPRVVLKMQFLD 663
>POMBASE|SPAC3G6.11 [details] [associations]
symbol:chl1 "ATP-dependent DNA helicase Chl1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006342
"chromatin silencing" evidence=NAS] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=IEA] [GO:0045910 "negative regulation of DNA
recombination" evidence=ISO] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 PomBase:SPAC3G6.11 INTERPRO:IPR013020 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0000790 GO:GO:0004003 GO:GO:0006342 GO:GO:0007064
GO:GO:0045910 eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5
TIGRFAMs:TIGR00604 PIR:T38730 RefSeq:NP_594977.1
ProteinModelPortal:O14147 STRING:O14147 EnsemblFungi:SPAC3G6.11.1
GeneID:2543118 KEGG:spo:SPAC3G6.11 HOGENOM:HOG000241266 OMA:NLGRCVV
OrthoDB:EOG408RH6 NextBio:20804145 Uniprot:O14147
Length = 844
Score = 134 (52.2 bits), Expect = 9.2e-08, P = 9.2e-08
Identities = 34/107 (31%), Positives = 59/107 (55%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W G+ +R+ K ++ E + D +N L F KQ+ + +LF++
Sbjct: 663 WEMNGITNRLNAKKPLFIESK--DFGDNP-LDTFEHYKQSV-------DAGLSGMLFSVI 712
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
G++SEGI+F+D R+V+ VG+PFP+ QD + + K SY + A++K
Sbjct: 713 GGRLSEGINFSDKLGRAVMVVGMPFPNSQDVEWQAKVSYVEEKAKEK 759
>UNIPROTKB|A4K436 [details] [associations]
symbol:RTEL1 "Regulator of telomere elongation helicase 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0010569 "regulation of double-strand break repair via
homologous recombination" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0000723 "telomere maintenance" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0006281 GO:GO:0051539 GO:GO:0004003 GO:GO:0000723
GO:GO:0010569 eggNOG:COG1199 TIGRFAMs:TIGR00604
HOGENOM:HOG000007558 KO:K11136 EMBL:DQ323152 EMBL:DQ323153
EMBL:DQ420360 EMBL:DQ420361 EMBL:DQ420362 EMBL:DQ420363
IPI:IPI00840795 IPI:IPI00905335 IPI:IPI00930023 IPI:IPI00930030
IPI:IPI00930035 RefSeq:NP_001091044.1 UniGene:Bt.6256
ProteinModelPortal:A4K436 GeneID:505721 KEGG:bta:505721 CTD:51750
InParanoid:A4K434 OrthoDB:EOG412M4Q NextBio:20867282 Uniprot:A4K436
Length = 1216
Score = 135 (52.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/101 (30%), Positives = 48/101 (47%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W + ++ K ++ EPR VM ++ + E ++GA+ +
Sbjct: 571 WRARDFTRKLEVRKPLFVEPRSKGGFSEVMEAFYARVAAPE---------SSGAIFLAVC 621
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
RGK SEG+DFAD R VI G+P+P D +V LK + D
Sbjct: 622 RGKASEGLDFADVNGRGVIVTGLPYPPRMDPRVLLKMQFLD 662
>UNIPROTKB|E1BL06 [details] [associations]
symbol:E1BL06 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030496 "midbody" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0000922 "spindle pole"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR014013 InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307
PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0003677 GO:GO:0000790 GO:GO:0004003 GO:GO:0030496
GO:GO:0000922 InterPro:IPR014001 SMART:SM00487
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 OMA:NLGRCVV
GeneTree:ENSGT00530000063199 GO:GO:0007062 EMBL:DAAA02014574
EMBL:DAAA02014575 EMBL:DAAA02014576 EMBL:DAAA02014577
IPI:IPI00707607 Ensembl:ENSBTAT00000009329 Uniprot:E1BL06
Length = 913
Score = 132 (51.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 29/76 (38%), Positives = 46/76 (60%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W +GL+ R+ K ++ EPR+ + +E V+L Y IK ++ T TGALL ++
Sbjct: 719 WEKSGLLARLTIRKKIFQEPRKANRVEQVLLEYSRCIKHCG-QAQGTE---TGALLLSVV 774
Query: 90 RGKISEGIDFADNYAR 105
GK+SEGI+F+D+ R
Sbjct: 775 GGKMSEGINFSDDLGR 790
>WB|WBGene00010839 [details] [associations]
symbol:chl-1 species:6239 "Caenorhabditis elegans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0003677 GO:GO:0004003 eggNOG:COG1199
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 HOGENOM:HOG000241266
OMA:NLGRCVV GeneTree:ENSGT00530000063199 EMBL:Z49128
RefSeq:NP_499295.2 ProteinModelPortal:Q21489 SMR:Q21489
STRING:Q21489 PaxDb:Q21489 EnsemblMetazoa:M03C11.2 GeneID:176457
KEGG:cel:CELE_M03C11.2 UCSC:M03C11.2 CTD:176457 WormBase:M03C11.2
InParanoid:Q21489 NextBio:892664 Uniprot:Q21489
Length = 830
Score = 130 (50.8 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 35/115 (30%), Positives = 63/115 (54%)
Query: 17 IPNKDSANGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNT 76
+P+ D + + G++ RI E K+V+ E R+ +V F+ R++ T
Sbjct: 647 VPSYDFLFNFQKKMKEFGILKRIEEKKAVFTESRQ--PTSDVW-DRFS-------RAAKT 696
Query: 77 SEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDT 131
S+ GA+LF + GK+SEGI+F D R+VI +G+P+P+ +++ + + DT
Sbjct: 697 SK---GAILFAVVGGKMSEGINFCDELGRAVIVIGLPYPNKTSVELRERMKFLDT 748
>ASPGD|ASPL0000038959 [details] [associations]
symbol:AN10414 species:162425 "Emericella nidulans"
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 EMBL:BN001306 GO:GO:0004003
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 OMA:NLGRCVV
EnsemblFungi:CADANIAT00009590 Uniprot:C8VHC2
Length = 841
Score = 130 (50.8 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 74 SNTSEKNTGALLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHA 133
+NT K GALL ++ GK+SEGI+F+D R V+ VG+PFP+I+ + K Y + A
Sbjct: 682 ANTINKGRGALLLSVVGGKLSEGINFSDKLGRGVLIVGLPFPNIRSPVWQAKIKYIEQKA 741
Query: 134 QK 135
+
Sbjct: 742 YR 743
>GENEDB_PFALCIPARUM|MAL13P1.134 [details] [associations]
symbol:MAL13P1.134 "helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0016020 "membrane"
evidence=ISS] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 GO:GO:0005524 GO:GO:0016020 GO:GO:0003677
GO:GO:0004003 EMBL:AL844509 KO:K11273 PANTHER:PTHR11472:SF5
RefSeq:XP_001349985.1 ProteinModelPortal:Q8IE72
EnsemblProtists:MAL13P1.134:mRNA GeneID:813685 KEGG:pfa:MAL13P1.134
EuPathDB:PlasmoDB:PF3D7_1324500 HOGENOM:HOG000281821
ProtClustDB:CLSZ2500734 Uniprot:Q8IE72
Length = 1099
Score = 131 (51.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 35/100 (35%), Positives = 59/100 (59%)
Query: 35 LMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIFRGKIS 94
+ +RI++ K V+ E ++ND+ ++ Y I+ + N +N G +LF + GK+S
Sbjct: 851 IFNRIKKKKFVFFE-KKNDD--TIVKNYMNNIENIKNIDPNLRIQN-GCILFCVMNGKLS 906
Query: 95 EGIDFADNYARSVISVGIPF---PSIQDEKV-KLK--RSY 128
EGI+F D+ R+V+ VGIPF S+ D+ + +LK R Y
Sbjct: 907 EGINFYDDLCRNVVVVGIPFIKHDSVVDKNLLRLKYYREY 946
>UNIPROTKB|Q8IE72 [details] [associations]
symbol:MAL13P1.134 "DEAD box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016020 "membrane"
evidence=ISS] InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 GO:GO:0005524 GO:GO:0016020 GO:GO:0003677
GO:GO:0004003 EMBL:AL844509 KO:K11273 PANTHER:PTHR11472:SF5
RefSeq:XP_001349985.1 ProteinModelPortal:Q8IE72
EnsemblProtists:MAL13P1.134:mRNA GeneID:813685 KEGG:pfa:MAL13P1.134
EuPathDB:PlasmoDB:PF3D7_1324500 HOGENOM:HOG000281821
ProtClustDB:CLSZ2500734 Uniprot:Q8IE72
Length = 1099
Score = 131 (51.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 35/100 (35%), Positives = 59/100 (59%)
Query: 35 LMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIFRGKIS 94
+ +RI++ K V+ E ++ND+ ++ Y I+ + N +N G +LF + GK+S
Sbjct: 851 IFNRIKKKKFVFFE-KKNDD--TIVKNYMNNIENIKNIDPNLRIQN-GCILFCVMNGKLS 906
Query: 95 EGIDFADNYARSVISVGIPF---PSIQDEKV-KLK--RSY 128
EGI+F D+ R+V+ VGIPF S+ D+ + +LK R Y
Sbjct: 907 EGINFYDDLCRNVVVVGIPFIKHDSVVDKNLLRLKYYREY 946
>UNIPROTKB|Q91941 [details] [associations]
symbol:ERCC2/XPD "ERCC2/XPD protein" species:8083
"Xiphophorus maculatus" [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=ISS] [GO:0006917 "induction of
apoptosis" evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0006917 GO:GO:0003677 GO:GO:0004003
GO:GO:0006283 TIGRFAMs:TIGR00604 GO:GO:0043139 HOVERGEN:HBG051498
EMBL:U17896 PIR:I51720 ProteinModelPortal:Q91941 Uniprot:Q91941
Length = 760
Score = 127 (49.8 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W G+++ I++ K ++ E + D E M A+++ + E GA+L ++
Sbjct: 552 WYEQGILENIQKNKLIFIETQ--DAAETSM-----ALEKYQ----EACENGRGAILLSVA 600
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF ++ R+VI G+P+ Q +K + Y
Sbjct: 601 RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEY 639
>CGD|CAL0002854 [details] [associations]
symbol:RAD3 species:5476 "Candida albicans" [GO:0003678 "DNA
helicase activity" evidence=IDA] [GO:0005675 "holo TFIIH complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000439 "core
TFIIH complex" evidence=IEA] [GO:0000112 "nucleotide-excision
repair factor 3 complex" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IEA] [GO:0010525 "regulation of
transposition, RNA-mediated" evidence=IEA] [GO:0000019 "regulation
of mitotic recombination" evidence=IEA] [GO:0070816
"phosphorylation of RNA polymerase II C-terminal domain"
evidence=IEA] [GO:0000717 "nucleotide-excision repair, DNA duplex
unwinding" evidence=IEA] [GO:0033683 "nucleotide-excision repair,
DNA incision" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001945
InterPro:IPR002464 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
CGD:CAL0002854 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004003 EMBL:AACQ01000024 GO:GO:0003678
GO:GO:0006289 eggNOG:COG1199 TIGRFAMs:TIGR00604 KO:K10844
RefSeq:XP_720409.1 RefSeq:XP_888639.1 ProteinModelPortal:Q5AFE9
STRING:Q5AFE9 GeneID:3638014 GeneID:3704106 KEGG:cal:CaO19.7119
KEGG:cal:CaO19_7119 Uniprot:Q5AFE9
Length = 765
Score = 127 (49.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W S G++D + + K + E D E + A++ SN GA+L ++
Sbjct: 553 WQSMGVLDEVWKHKLILVETP--DAQETSL-----ALETYRKACSN----GRGAVLLSVA 601
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
RGK+SEGIDF +Y R+V+ +GIPF + +K + + H Q K
Sbjct: 602 RGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIK 648
>UNIPROTKB|Q5AFE9 [details] [associations]
symbol:RAD3 "Putative uncharacterized protein RAD3"
species:237561 "Candida albicans SC5314" [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IDA] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 CGD:CAL0002854 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004003
EMBL:AACQ01000024 GO:GO:0003678 GO:GO:0006289 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K10844 RefSeq:XP_720409.1 RefSeq:XP_888639.1
ProteinModelPortal:Q5AFE9 STRING:Q5AFE9 GeneID:3638014
GeneID:3704106 KEGG:cal:CaO19.7119 KEGG:cal:CaO19_7119
Uniprot:Q5AFE9
Length = 765
Score = 127 (49.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W S G++D + + K + E D E + A++ SN GA+L ++
Sbjct: 553 WQSMGVLDEVWKHKLILVETP--DAQETSL-----ALETYRKACSN----GRGAVLLSVA 601
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHAQKK 136
RGK+SEGIDF +Y R+V+ +GIPF + +K + + H Q K
Sbjct: 602 RGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFMRDHFQIK 648
>FB|FBgn0261850 [details] [associations]
symbol:Xpd "Xeroderma pigmentosum D" species:7227 "Drosophila
melanogaster" [GO:0006289 "nucleotide-excision repair"
evidence=ISS;IDA] [GO:0001113 "transcriptional open complex
formation at RNA polymerase II promoter" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=ISS;IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005675 "holo TFIIH complex"
evidence=ISS] [GO:0009411 "response to UV" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005703 "polytene
chromosome puff" evidence=IDA] [GO:0000439 "core TFIIH complex"
evidence=ISS;IDA] [GO:0001111 "promoter clearance from RNA
polymerase II promoter" evidence=ISS] [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0007088
"regulation of mitosis" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0051983 "regulation of chromosome
segregation" evidence=IMP] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 EMBL:AE013599
GO:GO:0005524 GO:GO:0005737 GO:GO:0007088 GO:GO:0009411
GO:GO:0003677 GO:GO:0006367 GO:GO:0006289 GO:GO:0051983
GO:GO:0005675 GO:GO:0005703 GO:GO:0010972 GO:GO:0005705
TIGRFAMs:TIGR00604 KO:K10844 OMA:KDVDGKC GO:GO:0043141
GeneTree:ENSGT00550000075092 GO:GO:0000439 FlyBase:FBgn0261850
RefSeq:NP_726036.2 UniGene:Dm.718 ProteinModelPortal:Q7KVP9
STRING:Q7KVP9 PRIDE:Q7KVP9 EnsemblMetazoa:FBtr0071576 GeneID:37414
KEGG:dme:Dmel_CG9433 UCSC:CG9433-RA CTD:37414 InParanoid:Q7KVP9
OrthoDB:EOG4FTTFK PhylomeDB:Q7KVP9 GenomeRNAi:37414 NextBio:803510
ArrayExpress:Q7KVP9 Bgee:Q7KVP9 Uniprot:Q7KVP9
Length = 769
Score = 127 (49.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 29/99 (29%), Positives = 49/99 (49%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W G++D + K ++ E + N E ++ Y +K + GA+L +
Sbjct: 552 WYDQGIVDTLLRYKLLFIETQDNAETSYALMNY---VKACDC--------GRGAVLLAVA 600
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEG+DF +Y R+V+ GIP+ Q +K + Y
Sbjct: 601 RGKVSEGVDFDHHYGRAVLMFGIPYVYTQSRILKARLDY 639
>ZFIN|ZDB-GENE-040426-997 [details] [associations]
symbol:ercc2 "excision repair cross-complementing
rodent repair deficiency, complementation group 2" species:7955
"Danio rerio" [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006139 "nucleobase-containing
compound metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR010643
InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777 Pfam:PF13307
PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 ZFIN:ZDB-GENE-040426-997
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004003
GO:GO:0006289 TIGRFAMs:TIGR00604 GeneTree:ENSGT00550000075092
EMBL:CR855332 EMBL:JN172105 IPI:IPI00495155 UniGene:Dr.5152
Ensembl:ENSDART00000141618 Uniprot:F1Q5E7
Length = 760
Score = 126 (49.4 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 30/99 (30%), Positives = 52/99 (52%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W G+++ I+ K ++ E + D E M A+++ + E GA+L ++
Sbjct: 552 WYEQGILENIQRNKLIFIETQ--DAAETSM-----ALEKYQ----EACENGRGAILLSVA 600
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF ++ R+VI G+P+ Q +K + Y
Sbjct: 601 RGKVSEGIDFVHHFGRAVIMFGVPYVYTQSRILKARLEY 639
>UNIPROTKB|E7EVE9 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9606 "Homo sapiens" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004003 TIGRFAMs:TIGR00604 EMBL:L47234
HGNC:HGNC:3434 ChiTaRS:ERCC2 IPI:IPI00745781
ProteinModelPortal:E7EVE9 Ensembl:ENST00000391944 UCSC:uc010ejz.2
ArrayExpress:E7EVE9 Bgee:E7EVE9 Uniprot:E7EVE9
Length = 682
Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W G+++ I+ K ++ E + E + Y A E GA+L ++
Sbjct: 474 WYEQGILENIQRNKLLFIETQDGAETSVALEKYQEAC-----------ENGRGAILLSVA 522
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF +Y R+VI G+P+ Q +K + Y
Sbjct: 523 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEY 561
>UNIPROTKB|A8MX75 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9606 "Homo sapiens" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004003 GO:GO:0006289
TIGRFAMs:TIGR00604 HOGENOM:HOG000205390 HOVERGEN:HBG051498
EMBL:L47234 HGNC:HGNC:3434 ChiTaRS:ERCC2 IPI:IPI00442420
ProteinModelPortal:A8MX75 STRING:A8MX75 PRIDE:A8MX75
Ensembl:ENST00000391941 ArrayExpress:A8MX75 Bgee:A8MX75
Uniprot:A8MX75
Length = 706
Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W G+++ I+ K ++ E + E + Y A E GA+L ++
Sbjct: 528 WYEQGILENIQRNKLLFIETQDGAETSVALEKYQEAC-----------ENGRGAILLSVA 576
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF +Y R+VI G+P+ Q +K + Y
Sbjct: 577 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEY 615
>UNIPROTKB|J9NWT1 [details] [associations]
symbol:ERCC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR010643
InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777 Pfam:PF13307
PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004003 GO:GO:0006289 TIGRFAMs:TIGR00604
GeneTree:ENSGT00550000075092 EMBL:AAEX03000876
Ensembl:ENSCAFT00000044333 Uniprot:J9NWT1
Length = 707
Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W G+++ I+ K ++ E + E + Y A E GA+L ++
Sbjct: 552 WYEQGILENIQRNKLLFIETQDGAETSVALEKYQEAC-----------ENGRGAILLSVA 600
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF +Y R+VI G+P+ Q +K + Y
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEY 639
>SGD|S000005929 [details] [associations]
symbol:CHL1 "Probable DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007059 "chromosome segregation"
evidence=IDA] [GO:0003678 "DNA helicase activity" evidence=ISS;IMP]
[GO:0006270 "DNA replication initiation" evidence=IMP] [GO:0007064
"mitotic sister chromatid cohesion" evidence=IGI;IMP;IPI]
[GO:0032508 "DNA duplex unwinding" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0036297 "interstrand cross-link repair" evidence=IGI]
[GO:0045910 "negative regulation of DNA recombination"
evidence=IGI;IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0007535 "donor selection"
evidence=IGI;IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR014013
InterPro:IPR027076 Pfam:PF06733 Pfam:PF13307 PROSITE:PS00690
PROSITE:PS51193 SMART:SM00488 SMART:SM00491 SGD:S000005929
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006270 EMBL:Z71255 EMBL:BK006949 GO:GO:0004003 EMBL:Z48483
EMBL:U33335 GO:GO:0003678 GO:GO:0007064 GO:GO:0045910
eggNOG:COG1199 KO:K11273 PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604
HOGENOM:HOG000241266 OMA:NLGRCVV OrthoDB:EOG408RH6 EMBL:X56584
PIR:S12499 RefSeq:NP_015317.1 ProteinModelPortal:P22516 SMR:P22516
DIP:DIP-4044N IntAct:P22516 MINT:MINT-526050 STRING:P22516
PaxDb:P22516 PeptideAtlas:P22516 EnsemblFungi:YPL008W GeneID:856099
KEGG:sce:YPL008W CYGD:YPL008w GeneTree:ENSGT00530000063199
NextBio:981143 Genevestigator:P22516 GermOnline:YPL008W
GO:GO:0007535 GO:GO:0036297 Uniprot:P22516
Length = 861
Score = 124 (48.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 30/84 (35%), Positives = 51/84 (60%)
Query: 50 RRNDE---LENVMLGYFTAIKQAELRS--SNTSEKNTGALLFTIFRGKISEGIDFADNYA 104
++ND L NV ++ A ++ S S++ + G+LL I GK+SEGI+F D+
Sbjct: 681 KQNDRFATLNNVRKIFYEAKDGDDILSGYSDSVAEGRGSLLLAIVGGKLSEGINFQDDLC 740
Query: 105 RSVISVGIPFPSIQDEKVKLKRSY 128
R+V+ VG+PFP+I ++ +KR +
Sbjct: 741 RAVVMVGLPFPNIFSGELIVKRKH 764
>UNIPROTKB|F1N2P3 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9913 "Bos taurus" [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0060218 "hematopoietic stem cell
differentiation" evidence=IEA] [GO:0048820 "hair follicle
maturation" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043588 "skin
development" evidence=IEA] [GO:0043388 "positive regulation of DNA
binding" evidence=IEA] [GO:0043249 "erythrocyte maturation"
evidence=IEA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0040016 "embryonic cleavage"
evidence=IEA] [GO:0035315 "hair cell differentiation" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0033683 "nucleotide-excision repair, DNA incision"
evidence=IEA] [GO:0032289 "central nervous system myelin formation"
evidence=IEA] [GO:0030282 "bone mineralization" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021510 "spinal cord development" evidence=IEA] [GO:0019907
"cyclin-dependent protein kinase activating kinase holoenzyme
complex" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0009650 "UV protection" evidence=IEA] [GO:0008353
"RNA polymerase II carboxy-terminal domain kinase activity"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007568
"aging" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0000075 "cell cycle
checkpoint" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001945
InterPro:IPR002464 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737 GO:GO:0006915
GO:GO:0043066 GO:GO:0043588 GO:GO:0007059 GO:GO:0006979
GO:GO:0006917 GO:GO:0003677 GO:GO:0008283 GO:GO:0007568
GO:GO:0001701 GO:GO:0045944 GO:GO:0030198 GO:GO:0040016
GO:GO:0009791 GO:GO:0060218 GO:GO:0004003 GO:GO:0035264
GO:GO:0071817 GO:GO:0021510 GO:GO:0030282 GO:GO:0000075
GO:GO:0043388 GO:GO:0008353 GO:GO:0009650 GO:GO:0019907
GO:GO:0006283 TIGRFAMs:TIGR00604 GO:GO:0035315 GO:GO:0043139
GO:GO:0043249 OMA:KDVDGKC IPI:IPI00866827 GO:GO:0033683
GO:GO:0032289 GO:GO:0048820 GeneTree:ENSGT00550000075092
EMBL:DAAA02047375 Ensembl:ENSBTAT00000002680 Uniprot:F1N2P3
Length = 759
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W G+++ I+ K ++ E + E + Y A E GA+L ++
Sbjct: 551 WYEQGILENIQRNKLLFIETQDGAETSVALEKYQEAC-----------ENGRGAILLSVA 599
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF +Y R+VI G+P+ Q +K + Y
Sbjct: 600 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEY 638
>UNIPROTKB|A6QLJ0 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9913 "Bos taurus" [GO:0006468
"protein phosphorylation" evidence=ISS] [GO:0008353 "RNA polymerase
II carboxy-terminal domain kinase activity" evidence=ISS]
[GO:0071817 "MMXD complex" evidence=ISS] [GO:0005819 "spindle"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] [GO:0005675 "holo TFIIH complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0035315 "hair cell differentiation" evidence=ISS] [GO:0004672
"protein kinase activity" evidence=ISS] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISS] [GO:0033683 "nucleotide-excision repair, DNA
incision" evidence=ISS] [GO:0019907 "cyclin-dependent protein
kinase activating kinase holoenzyme complex" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0006979 "response to oxidative stress"
evidence=ISS] [GO:0000075 "cell cycle checkpoint" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR010643
InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777 Pfam:PF13307
PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737
GO:GO:0007059 GO:GO:0006979 GO:GO:0046872 GO:GO:0003677
GO:GO:0045944 GO:GO:0006468 GO:GO:0051539 GO:GO:0006366
GO:GO:0004003 GO:GO:0071817 GO:GO:0008022 GO:GO:0000075
GO:GO:0005675 eggNOG:COG1199 TIGRFAMs:TIGR00604 GO:GO:0035315
GO:GO:0043139 KO:K10844 EMBL:BC147982 IPI:IPI00866827
RefSeq:NP_001096787.1 UniGene:Bt.4215 STRING:A6QLJ0 PRIDE:A6QLJ0
GeneID:100125238 KEGG:bta:100125238 CTD:2068 HOVERGEN:HBG051498
NextBio:20788783 GO:GO:0033683 Uniprot:A6QLJ0
Length = 760
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W G+++ I+ K ++ E + E + Y A E GA+L ++
Sbjct: 552 WYEQGILENIQRNKLLFIETQDGAETSVALEKYQEAC-----------ENGRGAILLSVA 600
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF +Y R+VI G+P+ Q +K + Y
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEY 639
>UNIPROTKB|P18074 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:9606 "Homo sapiens" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0021510 "spinal cord
development" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030282 "bone mineralization"
evidence=IEA] [GO:0032289 "central nervous system myelin formation"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0040016 "embryonic cleavage" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043249 "erythrocyte maturation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043588 "skin development" evidence=IEA] [GO:0048820 "hair
follicle maturation" evidence=IEA] [GO:0060218 "hematopoietic stem
cell differentiation" evidence=IEA] [GO:0000441 "SSL2-core TFIIH
complex" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0007568 "aging" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA;TAS] [GO:0006289 "nucleotide-excision repair"
evidence=IGI;NAS;TAS] [GO:0047485 "protein N-terminus binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006917 "induction of apoptosis" evidence=IMP] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IDA;TAS]
[GO:0005675 "holo TFIIH complex" evidence=IDA;TAS] [GO:0033683
"nucleotide-excision repair, DNA incision" evidence=IMP]
[GO:0004672 "protein kinase activity" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0043139 "5'-3' DNA helicase activity"
evidence=IDA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IDA;TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035315 "hair cell differentiation" evidence=IMP]
[GO:0000075 "cell cycle checkpoint" evidence=IMP] [GO:0006979
"response to oxidative stress" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0008353 "RNA
polymerase II carboxy-terminal domain kinase activity"
evidence=IDA] [GO:0009650 "UV protection" evidence=IGI] [GO:0000718
"nucleotide-excision repair, DNA damage removal" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281 "DNA repair"
evidence=TAS] [GO:0006360 "transcription from RNA polymerase I
promoter" evidence=TAS] [GO:0006361 "transcription initiation from
RNA polymerase I promoter" evidence=TAS] [GO:0006362 "transcription
elongation from RNA polymerase I promoter" evidence=TAS]
[GO:0006363 "termination of RNA polymerase I transcription"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=TAS]
[GO:0006370 "7-methylguanosine mRNA capping" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0050434 "positive regulation of
viral transcription" evidence=TAS] [GO:0006468 "protein
phosphorylation" evidence=IDA] Reactome:REACT_216 Reactome:REACT_71
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR010643
InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777 Pfam:PF13307
PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737
Reactome:REACT_116125 GO:GO:0006915 GO:GO:0019048 GO:GO:0043066
GO:GO:0043588 GO:GO:0007059 GO:GO:0016032 GO:GO:0006979
GO:GO:0006917 GO:GO:0046872 GO:GO:0003677 GO:GO:0008283
GO:GO:0007568 GO:GO:0001701 GO:GO:0001666 Reactome:REACT_1675
GO:GO:0045944 GO:GO:0030198 GO:GO:0006468 EMBL:CH471126
GO:GO:0040016 GO:GO:0051539 GO:GO:0009791 GO:GO:0060218
GO:GO:0004003 GO:GO:0035264 GO:GO:0006368 GO:GO:0071817
GO:GO:0021510 GO:GO:0030282 GO:GO:0006367 GO:GO:0000075
Reactome:REACT_1788 GO:GO:0043388 GO:GO:0009650 GO:GO:0005675
GO:GO:0006370 GO:GO:0000718 GO:GO:0050434 GO:GO:0006363
GO:GO:0006362 GO:GO:0006361 GO:GO:0006283 GO:GO:0008094
eggNOG:COG1199 TIGRFAMs:TIGR00604 GO:GO:0035315 GO:GO:0043139
GO:GO:0043249 Orphanet:1466 HOGENOM:HOG000205390 KO:K10844
OMA:KDVDGKC CTD:2068 HOVERGEN:HBG051498 GO:GO:0033683 EMBL:X52221
EMBL:X52222 EMBL:L47234 EMBL:AY092780 EMBL:BT006883 EMBL:BC108255
EMBL:BC110523 IPI:IPI00029728 IPI:IPI00984321 PIR:S10888
RefSeq:NP_000391.1 RefSeq:NP_001124339.1 UniGene:Hs.487294
ProteinModelPortal:P18074 DIP:DIP-644N STRING:P18074
PhosphoSite:P18074 DMDM:119540 PaxDb:P18074 PRIDE:P18074 DNASU:2068
Ensembl:ENST00000391940 Ensembl:ENST00000391942
Ensembl:ENST00000391945 GeneID:2068 KEGG:hsa:2068 UCSC:uc002pbj.2
GeneCards:GC19M045854 HGNC:HGNC:3434 HPA:CAB005375 MIM:126340
MIM:278730 MIM:601675 MIM:610756 neXtProt:NX_P18074 Orphanet:231256
Orphanet:453 Orphanet:670 Orphanet:276258 Orphanet:220295
PharmGKB:PA27848 InParanoid:P18074 OrthoDB:EOG4BVRT2
PhylomeDB:P18074 ChiTaRS:ERCC2 GenomeRNAi:2068 NextBio:8409
ArrayExpress:P18074 Bgee:P18074 CleanEx:HS_ERCC2
Genevestigator:P18074 GermOnline:ENSG00000104884 GO:GO:0000441
GO:GO:0032289 GO:GO:0048820 Uniprot:P18074
Length = 760
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W G+++ I+ K ++ E + E + Y A E GA+L ++
Sbjct: 552 WYEQGILENIQRNKLLFIETQDGAETSVALEKYQEAC-----------ENGRGAILLSVA 600
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF +Y R+VI G+P+ Q +K + Y
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEY 639
>UNIPROTKB|Q60452 [details] [associations]
symbol:ERCC2 "TFIIH basal transcription factor complex
helicase XPD subunit" species:10029 "Cricetulus griseus"
[GO:0000075 "cell cycle checkpoint" evidence=ISS] [GO:0005675 "holo
TFIIH complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005819 "spindle" evidence=ISS] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0006468 "protein phosphorylation" evidence=ISS]
[GO:0006917 "induction of apoptosis" evidence=ISS] [GO:0006979
"response to oxidative stress" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0008022 "protein
C-terminus binding" evidence=ISS] [GO:0033683 "nucleotide-excision
repair, DNA incision" evidence=ISS] [GO:0035315 "hair cell
differentiation" evidence=ISS] [GO:0043139 "5'-3' DNA helicase
activity" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0047485 "protein N-terminus binding"
evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS] [GO:0019907
"cyclin-dependent protein kinase activating kinase holoenzyme
complex" evidence=ISS] [GO:0004672 "protein kinase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0008353 "RNA polymerase II carboxy-terminal
domain kinase activity" evidence=ISS] InterPro:IPR001945
InterPro:IPR002464 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005737 GO:GO:0007059
GO:GO:0006979 GO:GO:0006917 GO:GO:0046872 GO:GO:0003677
GO:GO:0045944 GO:GO:0006468 GO:GO:0051539 GO:GO:0006366
GO:GO:0004003 GO:GO:0071817 GO:GO:0008022 GO:GO:0047485
GO:GO:0000075 GO:GO:0005675 GO:GO:0006283 TIGRFAMs:TIGR00604
GO:GO:0035315 GO:GO:0043139 CTD:2068 HOVERGEN:HBG051498
GO:GO:0033683 EMBL:U04968 EMBL:U04967 PIR:A55732
RefSeq:NP_001231320.1 GeneID:100689272 Uniprot:Q60452
Length = 760
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W G+++ I+ K ++ E + E + Y A E GA+L ++
Sbjct: 552 WYEQGILENIQRNKLLFIETQDGAETSVALEKYQEAC-----------ENGRGAILLSVA 600
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF +Y R+VI G+P+ Q +K + Y
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEY 639
>MGI|MGI:95413 [details] [associations]
symbol:Ercc2 "excision repair cross-complementing rodent
repair deficiency, complementation group 2" species:10090 "Mus
musculus" [GO:0000075 "cell cycle checkpoint" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IMP] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005675 "holo TFIIH complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005819 "spindle" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=ISO]
[GO:0006289 "nucleotide-excision repair" evidence=ISO;IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006468 "protein phosphorylation"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0006917 "induction of apoptosis" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=ISO;IMP] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007568 "aging"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0009411 "response to UV" evidence=IMP] [GO:0009650 "UV
protection" evidence=ISO;IMP] [GO:0009791 "post-embryonic
development" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0021510 "spinal cord development" evidence=IMP]
[GO:0022405 "hair cycle process" evidence=IMP] [GO:0030198
"extracellular matrix organization" evidence=IMP] [GO:0030282 "bone
mineralization" evidence=IMP] [GO:0032289 "central nervous system
myelin formation" evidence=IMP] [GO:0033683 "nucleotide-excision
repair, DNA incision" evidence=ISO] [GO:0035264 "multicellular
organism growth" evidence=IMP] [GO:0035315 "hair cell
differentiation" evidence=ISO;IMP] [GO:0040016 "embryonic cleavage"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043139 "5'-3' DNA helicase activity"
evidence=ISO] [GO:0043249 "erythrocyte maturation" evidence=IMP]
[GO:0043388 "positive regulation of DNA binding" evidence=IMP]
[GO:0043588 "skin development" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=ISO] [GO:0048820 "hair follicle maturation" evidence=IMP]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0060218
"hematopoietic stem cell differentiation" evidence=IMP] [GO:0071817
"MMXD complex" evidence=ISO] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 MGI:MGI:95413 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005737 GO:GO:0006915 GO:GO:0043066
GO:GO:0043588 GO:GO:0007059 GO:GO:0006979 GO:GO:0006917
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0007568
GO:GO:0001701 GO:GO:0001666 GO:GO:0045944 GO:GO:0030198
GO:GO:0040016 GO:GO:0051539 GO:GO:0006366 GO:GO:0009791
GO:GO:0060218 GO:GO:0004003 GO:GO:0035264 GO:GO:0071817
GO:GO:0021510 GO:GO:0030282 GO:GO:0000075 GO:GO:0043388
GO:GO:0008353 GO:GO:0009650 GO:GO:0005675 GO:GO:0019907
GO:GO:0006283 eggNOG:COG1199 TIGRFAMs:TIGR00604 GO:GO:0035315
GO:GO:0043139 GO:GO:0043249 EMBL:CH466639 HOGENOM:HOG000205390
KO:K10844 OMA:KDVDGKC CTD:2068 HOVERGEN:HBG051498 GO:GO:0033683
OrthoDB:EOG4BVRT2 GO:GO:0000441 GO:GO:0032289 GO:GO:0048820
EMBL:U97572 EMBL:AK004652 EMBL:AK082761 IPI:IPI00310721
RefSeq:NP_031975.2 UniGene:Mm.36524 ProteinModelPortal:O08811
SMR:O08811 STRING:O08811 PhosphoSite:O08811 PaxDb:O08811
PRIDE:O08811 Ensembl:ENSMUST00000062831 GeneID:13871 KEGG:mmu:13871
GeneTree:ENSGT00550000075092 InParanoid:Q8C487 NextBio:284788
Bgee:O08811 Genevestigator:O08811 GermOnline:ENSMUSG00000030400
Uniprot:O08811
Length = 760
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W G+++ I+ K ++ E + E + Y A E GA+L ++
Sbjct: 552 WYEQGILENIQRNKLLFIETQDGAETSVALEKYQEAC-----------ENGRGAILLSVA 600
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF +Y R+VI G+P+ Q +K + Y
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEY 639
>RGD|1309109 [details] [associations]
symbol:Ercc2 "excision repair cross-complementing rodent repair
deficiency, complementation group 2" species:10116 "Rattus
norvegicus" [GO:0000075 "cell cycle checkpoint" evidence=IEA;ISO]
[GO:0000441 "SSL2-core TFIIH complex" evidence=IDA] [GO:0001666
"response to hypoxia" evidence=IEP] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005819 "spindle" evidence=ISO]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006283
"transcription-coupled nucleotide-excision repair"
evidence=IEA;ISO] [GO:0006289 "nucleotide-excision repair"
evidence=ISO] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0006468 "protein phosphorylation"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=IEA;ISO]
[GO:0006917 "induction of apoptosis" evidence=IEA;ISO] [GO:0006979
"response to oxidative stress" evidence=IEA;ISO] [GO:0007059
"chromosome segregation" evidence=IEA;ISO] [GO:0007568 "aging"
evidence=IEA;ISO] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0008353 "RNA polymerase II carboxy-terminal
domain kinase activity" evidence=IEA;ISO] [GO:0009411 "response to
UV" evidence=ISO] [GO:0009650 "UV protection" evidence=IEA;ISO]
[GO:0009791 "post-embryonic development" evidence=IEA;ISO]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA;ISO] [GO:0021510 "spinal cord
development" evidence=IEA;ISO] [GO:0022405 "hair cycle process"
evidence=ISO] [GO:0030198 "extracellular matrix organization"
evidence=IEA;ISO] [GO:0030282 "bone mineralization"
evidence=IEA;ISO] [GO:0032289 "central nervous system myelin
formation" evidence=IEA;ISO] [GO:0033683 "nucleotide-excision
repair, DNA incision" evidence=IEA;ISO] [GO:0035264 "multicellular
organism growth" evidence=IEA;ISO] [GO:0035315 "hair cell
differentiation" evidence=IEA;ISO] [GO:0040016 "embryonic cleavage"
evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043139 "5'-3' DNA helicase
activity" evidence=IEA;ISO] [GO:0043249 "erythrocyte maturation"
evidence=IEA;ISO] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA;ISO] [GO:0043588 "skin development" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0048820 "hair
follicle maturation" evidence=IEA;ISO] [GO:0060218 "hematopoietic
stem cell differentiation" evidence=IEA;ISO] [GO:0071817 "MMXD
complex" evidence=IEA;ISO] [GO:0004672 "protein kinase activity"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISO] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 RGD:1309109 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005737 GO:GO:0006915 GO:GO:0043066
GO:GO:0043588 GO:GO:0007059 GO:GO:0006979 GO:GO:0006917
GO:GO:0003677 GO:GO:0008283 GO:GO:0007568 GO:GO:0001701
GO:GO:0001666 GO:GO:0045944 GO:GO:0030198 GO:GO:0040016
GO:GO:0009791 GO:GO:0060218 GO:GO:0004003 GO:GO:0035264
GO:GO:0071817 GO:GO:0021510 GO:GO:0030282 GO:GO:0000075
EMBL:CH473979 GO:GO:0043388 GO:GO:0008353 GO:GO:0009650
GO:GO:0019907 GO:GO:0006283 TIGRFAMs:TIGR00604 GO:GO:0035315
GO:GO:0043139 GO:GO:0043249 KO:K10844 CTD:2068 GO:GO:0033683
OrthoDB:EOG4BVRT2 GO:GO:0000441 GO:GO:0032289 GO:GO:0048820
GeneTree:ENSGT00550000075092 IPI:IPI00367025 RefSeq:NP_001166280.1
UniGene:Rn.41871 Ensembl:ENSRNOT00000024246 GeneID:308415
KEGG:rno:308415 NextBio:658821 Uniprot:D3ZEG9
Length = 760
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W G+++ I+ K ++ E + E + Y A E GA+L ++
Sbjct: 552 WYEQGILENIQRNKLLFIETQDGAETSVALEKYQEAC-----------ENGRGAILLSVA 600
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF +Y R+VI G+P+ Q +K + Y
Sbjct: 601 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEY 639
>UNIPROTKB|F1PMH9 [details] [associations]
symbol:ERCC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006554
InterPro:IPR006555 InterPro:IPR010614 InterPro:IPR010643
InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777 Pfam:PF13307
PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004003 GO:GO:0006289 TIGRFAMs:TIGR00604
OMA:KDVDGKC GeneTree:ENSGT00550000075092 EMBL:AAEX03000876
Ensembl:ENSCAFT00000007249 Uniprot:F1PMH9
Length = 771
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/99 (30%), Positives = 48/99 (48%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W G+++ I+ K ++ E + E + Y A E GA+L ++
Sbjct: 564 WYEQGILENIQRNKLLFIETQDGAETSVALEKYQEAC-----------ENGRGAILLSVA 612
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF +Y R+VI G+P+ Q +K + Y
Sbjct: 613 RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEY 651
>POMBASE|SPAC1D4.12 [details] [associations]
symbol:rad15 "transcription factor TFIIH complex subunit
Rad15" species:4896 "Schizosaccharomyces pombe" [GO:0000112
"nucleotide-excision repair factor 3 complex" evidence=IGI]
[GO:0000439 "core TFIIH complex" evidence=ISO] [GO:0000717
"nucleotide-excision repair, DNA duplex unwinding" evidence=IGI]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005675 "holo TFIIH complex" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=ISO]
[GO:0043141 "ATP-dependent 5'-3' DNA helicase activity"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR001945 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
PomBase:SPAC1D4.12 INTERPRO:IPR013020 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003677
GO:GO:0051539 GO:GO:0006367 GO:GO:0000991 GO:GO:0005675
eggNOG:COG1199 TIGRFAMs:TIGR00604 HOGENOM:HOG000205390 KO:K10844
OMA:KDVDGKC GO:GO:0043141 GO:GO:0000717 GO:GO:0000439 GO:GO:0000112
EMBL:X64583 EMBL:X60499 PIR:S22660 RefSeq:NP_593025.1
ProteinModelPortal:P26659 IntAct:P26659 STRING:P26659
EnsemblFungi:SPAC1D4.12.1 GeneID:2542203 KEGG:spo:SPAC1D4.12
OrthoDB:EOG4G1QQH NextBio:20803273 Uniprot:P26659
Length = 772
Score = 123 (48.4 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W S G++D + + K + E D E + A++ SN GA+L ++
Sbjct: 551 WQSMGILDEVWKYKLILVETP--DPHETTL-----ALETYRAACSN----GRGAVLLSVA 599
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY-NDTH 132
RGK+SEG+DF +Y R+VI GIP+ + +K + + DT+
Sbjct: 600 RGKVSEGVDFDHHYGRAVIMFGIPYQYTESRVLKARLEFLRDTY 643
>ASPGD|ASPL0000055138 [details] [associations]
symbol:AN9436 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0010525 "regulation of
transposition, RNA-mediated" evidence=IEA] [GO:0000019 "regulation
of mitotic recombination" evidence=IEA] [GO:0070816
"phosphorylation of RNA polymerase II C-terminal domain"
evidence=IEA] [GO:0000717 "nucleotide-excision repair, DNA duplex
unwinding" evidence=IEA] [GO:0033683 "nucleotide-excision repair,
DNA incision" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003684 "damaged DNA
binding" evidence=IEA] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IEA] [GO:0005675 "holo TFIIH complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000439 "core
TFIIH complex" evidence=IEA] [GO:0000112 "nucleotide-excision
repair factor 3 complex" evidence=IEA] InterPro:IPR001945
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS51193 SMART:SM00488
SMART:SM00491 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634
EMBL:BN001308 GO:GO:0003677 GO:GO:0004003 GO:GO:0006289
TIGRFAMs:TIGR00604 OMA:KDVDGKC EnsemblFungi:CADANIAT00001938
Uniprot:C8VRA9
Length = 791
Score = 122 (48.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 31/99 (31%), Positives = 46/99 (46%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W G++D I K + E E + Y TA GALLF +
Sbjct: 551 WQGMGILDSIWNYKLILVETPDAQESSLALETYRTACCNGR-----------GALLFCVA 599
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF +Y R+V+ +G+PF + +K + +
Sbjct: 600 RGKVSEGIDFDHHYGRAVLCIGVPFQYTESRILKARLEF 638
>TAIR|locus:2014525 [details] [associations]
symbol:UVH6 "ULTRAVIOLET HYPERSENSITIVE 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=IEA] [GO:0006289 "nucleotide-excision repair"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IMP] [GO:0009408
"response to heat" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=RCA] [GO:0006457 "protein folding" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0010212 "response to ionizing radiation" evidence=RCA]
[GO:0010286 "heat acclimation" evidence=RCA] [GO:0042542 "response
to hydrogen peroxide" evidence=RCA] [GO:0043687 "post-translational
protein modification" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0009411 "response to UV" evidence=IMP] InterPro:IPR001945
InterPro:IPR002464 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
INTERPRO:IPR013020 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005524 GO:GO:0005634 GO:GO:0009411 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0006281 GO:GO:0006351
GO:GO:0051539 GO:GO:0009408 GO:GO:0004003 GO:GO:0006289
eggNOG:COG1199 TIGRFAMs:TIGR00604 EMBL:AY090788 EMBL:AF188623
EMBL:AC005278 EMBL:AY062471 EMBL:AY090915 EMBL:BT010344
IPI:IPI00543586 PIR:C86163 RefSeq:NP_171818.1 RefSeq:NP_849584.1
UniGene:At.10863 ProteinModelPortal:Q8W4M7 SMR:Q8W4M7 IntAct:Q8W4M7
STRING:Q8W4M7 PaxDb:Q8W4M7 PRIDE:Q8W4M7 EnsemblPlants:AT1G03190.1
EnsemblPlants:AT1G03190.2 GeneID:839557 KEGG:ath:AT1G03190
GeneFarm:4445 TAIR:At1g03190 HOGENOM:HOG000205390 InParanoid:Q8W4M7
KO:K10844 OMA:KDVDGKC PhylomeDB:Q8W4M7 ProtClustDB:CLSN2679645
Genevestigator:Q8W4M7 GermOnline:AT1G03190 Uniprot:Q8W4M7
Length = 758
Score = 119 (46.9 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 33/114 (28%), Positives = 59/114 (51%)
Query: 24 NGCEIRWSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGA 83
+G W+ TG++ I + K V+ E + D +E + A+ R+ + GA
Sbjct: 546 DGIIATWNETGILKEIMQQKLVFIETQ--DVVETTL-----ALDNYR-RACDCGR---GA 594
Query: 84 LLFTIFRGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY-NDTHAQKK 136
+ F++ RGK++EGIDF +Y R V+ G+PF + ++ + Y +DT K+
Sbjct: 595 VFFSVARGKVAEGIDFDRHYGRLVVMYGVPFQYTLSKILRARLEYLHDTFQIKE 648
>WB|WBGene00021752 [details] [associations]
symbol:Y50D7A.2 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR001945 InterPro:IPR002464 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00491 INTERPRO:IPR013020
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003677 GO:GO:0000003
EMBL:FO081772 GO:GO:0004003 GO:GO:0006289 eggNOG:COG1199
TIGRFAMs:TIGR00604 HOGENOM:HOG000205390 KO:K10844 OMA:KDVDGKC
GeneTree:ENSGT00550000075092 RefSeq:NP_497182.2 UniGene:Cel.30456
ProteinModelPortal:Q9N3L2 STRING:Q9N3L2 PaxDb:Q9N3L2
EnsemblMetazoa:Y50D7A.2 GeneID:175190 KEGG:cel:CELE_Y50D7A.2
UCSC:Y50D7A.2 CTD:175190 WormBase:Y50D7A.2 InParanoid:Q9N3L2
NextBio:887130 Uniprot:Q9N3L2
Length = 606
Score = 116 (45.9 bits), Expect = 5.1e-06, P = 5.1e-06
Identities = 29/99 (29%), Positives = 53/99 (53%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W ++D + + K ++ E ND LE +A + + + ++ GA+LF++
Sbjct: 397 WYEQHIIDELMKYKLLFIET--NDALET------SAALEKYVEACDSGR---GAVLFSVA 445
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF+ + R VI +GIP+ + ++ + Y
Sbjct: 446 RGKVSEGIDFSHHLGRCVIMLGIPYMYTESRVLRARLEY 484
>SGD|S000000973 [details] [associations]
symbol:RAD3 "5' to 3' DNA helicase" species:4932
"Saccharomyces cerevisiae" [GO:0000439 "core TFIIH complex"
evidence=IDA] [GO:0005675 "holo TFIIH complex" evidence=IDA]
[GO:0070816 "phosphorylation of RNA polymerase II C-terminal
domain" evidence=IDA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0000990 "core RNA polymerase
binding transcription factor activity" evidence=IC] [GO:0000112
"nucleotide-excision repair factor 3 complex" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0010525 "regulation of transposition,
RNA-mediated" evidence=IMP] [GO:0043141 "ATP-dependent 5'-3' DNA
helicase activity" evidence=IDA] [GO:0000019 "regulation of mitotic
recombination" evidence=IMP] [GO:0003684 "damaged DNA binding"
evidence=IDA] [GO:0033683 "nucleotide-excision repair, DNA
incision" evidence=IDA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] InterPro:IPR001945
InterPro:IPR002464 InterPro:IPR006554 InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR010643 InterPro:IPR014013
Pfam:PF06733 Pfam:PF06777 Pfam:PF13307 PRINTS:PR00852
PROSITE:PS00690 PROSITE:PS51193 SMART:SM00488 SMART:SM00491
SGD:S000000973 INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0046872
GO:GO:0003684 GO:GO:0051539 GO:GO:0006366 EMBL:BK006939 EMBL:U18922
RefSeq:NP_011098.3 GeneID:856918 KEGG:sce:YER171W GO:GO:0070816
GO:GO:0005675 eggNOG:COG1199 TIGRFAMs:TIGR00604
HOGENOM:HOG000205390 KO:K10844 OMA:KDVDGKC GO:GO:0033683
GO:GO:0043141 GeneTree:ENSGT00550000075092 GO:GO:0000439
GO:GO:0000112 GO:GO:0010525 GO:GO:0000019 OrthoDB:EOG4G1QQH
EMBL:X02368 EMBL:K03293 PIR:A23308 RefSeq:NP_011102.3
ProteinModelPortal:P06839 DIP:DIP-2425N IntAct:P06839
MINT:MINT-617451 STRING:P06839 PaxDb:P06839 PeptideAtlas:P06839
EnsemblFungi:YER171W GeneID:856922 KEGG:sce:YER175C CYGD:YER171w
NextBio:983374 Genevestigator:P06839 GermOnline:YER171W
Uniprot:P06839
Length = 778
Score = 117 (46.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W + G++D + + K + E D E + A++ SN GA+L ++
Sbjct: 554 WQTMGILDEVWKHKLILVETP--DAQETSL-----ALETYRKACSN----GRGAILLSVA 602
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF Y R+V+ +GIPF + +K + +
Sbjct: 603 RGKVSEGIDFDHQYGRTVLMIGIPFQYTESRILKARLEF 641
>DICTYBASE|DDB_G0267414 [details] [associations]
symbol:repD "transcription factor IIH component"
species:44689 "Dictyostelium discoideum" [GO:0006974 "response to
DNA damage stimulus" evidence=IEA;IEP] [GO:0043141 "ATP-dependent
5'-3' DNA helicase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006289 "nucleotide-excision repair" evidence=IEA;ISS]
[GO:0005675 "holo TFIIH complex" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0000287 "magnesium ion binding"
evidence=ISS] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000443 "SSL2-core TFIIH complex portion
of holo TFIIH complex" evidence=ISS] [GO:0000442 "SSL2-core TFIIH
complex portion of NEF3 complex" evidence=ISS] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001945 InterPro:IPR002464
InterPro:IPR006554 InterPro:IPR006555 InterPro:IPR010614
InterPro:IPR010643 InterPro:IPR014013 Pfam:PF06733 Pfam:PF06777
Pfam:PF13307 PRINTS:PR00852 PROSITE:PS00690 PROSITE:PS51193
SMART:SM00488 SMART:SM00491 dictyBase:DDB_G0267414
INTERPRO:IPR013020 GO:GO:0005524 GenomeReviews:CM000150_GR
GO:GO:0006355 GO:GO:0000287 GO:GO:0003677 EMBL:AAFI02000003
GO:GO:0051539 GO:GO:0006366 GO:GO:0006289 eggNOG:COG1199
TIGRFAMs:TIGR00604 KO:K10844 OMA:KDVDGKC EMBL:U77066
RefSeq:XP_647302.1 ProteinModelPortal:Q55G81 STRING:Q55G81
EnsemblProtists:DDB0191272 GeneID:8616111 KEGG:ddi:DDB_G0267414
ProtClustDB:CLSZ2431526 GO:GO:0000443 GO:GO:0000442 GO:GO:0043141
Uniprot:Q55G81
Length = 776
Score = 115 (45.5 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 28/99 (28%), Positives = 53/99 (53%)
Query: 30 WSSTGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIF 89
W+ GL++ I K ++ E +D E+ + A++ + + GA+L ++
Sbjct: 545 WNEMGLLNNILTNKLIFVET--SDPAESAL-----ALQNYK----KACDSGRGAVLLSVA 593
Query: 90 RGKISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSY 128
RGK+SEGIDF + Y R VI GIP+ + + + ++ + +
Sbjct: 594 RGKVSEGIDFDNQYGRCVILYGIPYINTESKVLRARLEF 632
>FB|FBgn0026876 [details] [associations]
symbol:CG11403 species:7227 "Drosophila melanogaster"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0006289 "nucleotide-excision repair" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR006555
InterPro:IPR010614 InterPro:IPR014013 InterPro:IPR027076
Pfam:PF06733 Pfam:PF13307 PROSITE:PS51193 SMART:SM00491
INTERPRO:IPR013020 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
EMBL:AE014298 GO:GO:0006200 GO:GO:0004003 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 eggNOG:COG1199 KO:K11273
PANTHER:PTHR11472:SF5 TIGRFAMs:TIGR00604 OMA:NLGRCVV
GeneTree:ENSGT00530000063199 EMBL:AL121806 EMBL:AY058540
RefSeq:NP_569898.1 UniGene:Dm.4169 SMR:Q9XZS9 STRING:Q9XZS9
EnsemblMetazoa:FBtr0070245 GeneID:31072 KEGG:dme:Dmel_CG11403
UCSC:CG11403-RA FlyBase:FBgn0026876 InParanoid:Q9XZS9
OrthoDB:EOG4Q83CB GenomeRNAi:31072 NextBio:771801 Uniprot:Q9XZS9
Length = 861
Score = 106 (42.4 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 29/98 (29%), Positives = 54/98 (55%)
Query: 33 TGLMDRIREVKSVYCEPRRNDELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIFRGK 92
+G ++ I KSV+ E + E ++ Y AIK+ + GALL ++ GK
Sbjct: 690 SGTLETISGRKSVFREV--SGSAEQLLDNYALAIKRPA---------SYGALLLSVVGGK 738
Query: 93 ISEGIDFADNYARSVISVGIPFPSIQDEKVKLKRSYND 130
+SEG++FAD+ R+V+ VG+P+ + +++ + + D
Sbjct: 739 LSEGLNFADDLGRAVLVVGLPYSNSLSPELRQRMQHLD 776
>UNIPROTKB|H0YGL4 [details] [associations]
symbol:DDX11 "Probable ATP-dependent RNA helicase DDX11"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0032508 "DNA
duplex unwinding" evidence=IEA] InterPro:IPR006555
InterPro:IPR027076 Pfam:PF13307 SMART:SM00491 GO:GO:0005524
GO:GO:0003676 GO:GO:0008026 PANTHER:PTHR11472:SF5 HGNC:HGNC:2736
EMBL:AC008013 Ensembl:ENST00000545115 Uniprot:H0YGL4
Length = 76
Score = 89 (36.4 bits), Expect = 0.00027, P = 0.00027
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 54 ELENVMLGYFTAIKQAELRSSNTSEKNTGALLFTIFRGKISEGIDFADNYARS 106
++E V+L Y I+ TGALL ++ GK+SEGI+F+DN RS
Sbjct: 2 QVEQVLLAYSRCIQACGQERGQV----TGALLLSVVGGKMSEGINFSDNLGRS 50
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 136 136 0.00091 102 3 11 22 0.44 31
30 0.45 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 92
No. of states in DFA: 585 (62 KB)
Total size of DFA: 137 KB (2085 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.24u 0.07s 13.31t Elapsed: 00:00:14
Total cpu time: 13.25u 0.07s 13.32t Elapsed: 00:00:26
Start: Thu Aug 15 13:53:46 2013 End: Thu Aug 15 13:54:12 2013