RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy877
         (136 letters)



>d1w96a3 d.142.1.2 (A:184-450) Acetyl-CoA carboxylase, BC-M
           subdomain {Baker's yeast (Saccharomyces cerevisiae)
           [TaxId: 4932]}
          Length = 267

 Score = 23.9 bits (50), Expect = 7.2
 Identities = 7/38 (18%), Positives = 15/38 (39%), Gaps = 2/38 (5%)

Query: 96  GIDFADNYARSVISVGIPFPSIQDEKVKLKRSYNDTHA 133
           G++      +  I++GIP   I D +     + +    
Sbjct: 213 GVNLPAAQLQ--IAMGIPMHRISDIRTLYGMNPHSASE 248


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.133    0.388 

Gapped
Lambda     K      H
   0.267   0.0394    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 474,862
Number of extensions: 19197
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 27
Number of HSP's successfully gapped: 1
Length of query: 136
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 60
Effective length of database: 1,364,116
Effective search space: 81846960
Effective search space used: 81846960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 48 (23.2 bits)