Query psy8771
Match_columns 904
No_of_seqs 408 out of 3902
Neff 10.9
Searched_HMMs 29240
Date Fri Aug 16 18:51:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8771.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/8771hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l5h_A Interleukin-6 receptor 100.0 3.2E-49 1.1E-53 456.4 26.1 548 110-812 9-588 (589)
2 2v5y_A Receptor-type tyrosine- 100.0 3.9E-45 1.3E-49 431.4 45.9 558 10-812 58-702 (731)
3 2v5y_A Receptor-type tyrosine- 100.0 3.4E-39 1.2E-43 380.7 46.1 359 488-894 268-703 (731)
4 1zlg_A Anosmin 1; insulin-like 100.0 6E-38 2E-42 363.7 51.1 446 167-839 134-663 (680)
5 3l5h_A Interleukin-6 receptor 100.0 9E-39 3.1E-43 369.0 29.4 398 440-893 157-588 (589)
6 3t1w_A Four-domain fibronectin 100.0 6E-35 2.1E-39 316.5 41.1 344 481-884 2-359 (375)
7 1fnf_A Fibronectin; RGD, extra 100.0 8.5E-35 2.9E-39 314.6 39.5 345 481-886 1-359 (368)
8 1zlg_A Anosmin 1; insulin-like 100.0 3.7E-34 1.3E-38 331.9 42.5 371 482-901 160-638 (680)
9 1fnf_A Fibronectin; RGD, extra 100.0 1.7E-33 5.7E-38 304.4 43.1 259 484-805 97-359 (368)
10 3t1w_A Four-domain fibronectin 100.0 3.2E-33 1.1E-37 303.0 44.4 261 484-805 98-361 (375)
11 2jll_A NCAM2, neural cell adhe 100.0 8.9E-31 3E-35 285.7 42.3 363 104-713 1-386 (389)
12 2jll_A NCAM2, neural cell adhe 100.0 3.1E-29 1.1E-33 273.4 39.5 336 35-576 15-385 (389)
13 3se4_A Interferon alpha/beta r 100.0 2.4E-30 8.1E-35 282.3 22.2 360 483-895 9-410 (414)
14 3se4_A Interferon alpha/beta r 100.0 3.7E-30 1.3E-34 280.8 21.2 314 442-814 67-410 (414)
15 3l5i_A Interleukin-6 receptor 100.0 4.6E-29 1.6E-33 259.5 23.1 272 482-812 4-289 (290)
16 3r8q_A Fibronectin; heparin, F 100.0 3.8E-28 1.3E-32 252.3 29.3 262 480-803 19-283 (290)
17 1tdq_A Tenascin-R; extracellul 100.0 1.7E-27 5.9E-32 246.6 31.1 260 480-805 13-278 (283)
18 2dtg_E Insulin receptor; IR ec 100.0 2.7E-29 9.2E-34 299.1 16.7 329 439-816 548-891 (897)
19 2dtg_E Insulin receptor; IR ec 100.0 2.6E-29 9E-34 299.2 16.6 363 483-899 470-893 (897)
20 1tdq_A Tenascin-R; extracellul 99.9 3.6E-25 1.2E-29 229.1 32.3 260 199-704 13-277 (283)
21 1i1r_A GP130, interleukin-6 re 99.9 9.3E-26 3.2E-30 235.6 28.0 266 110-577 10-301 (303)
22 3r8q_A Fibronectin; heparin, F 99.9 1.2E-25 4E-30 233.5 27.4 250 620-883 20-282 (290)
23 3l5i_A Interleukin-6 receptor 99.9 1.5E-25 5.3E-30 232.8 24.5 225 442-712 63-289 (290)
24 2d9q_B Granulocyte colony-stim 99.9 4.6E-24 1.6E-28 223.7 26.5 270 112-581 8-311 (313)
25 3s98_A Interferon alpha/beta r 99.9 5.7E-24 1.9E-28 220.4 22.1 277 482-813 4-302 (306)
26 1cfb_A Drosophila neuroglian; 99.9 3.5E-23 1.2E-27 202.3 24.0 193 619-814 4-204 (205)
27 3f7q_A Integrin beta-4, GP150; 99.9 1.7E-23 5.9E-28 209.0 20.7 220 480-758 4-231 (234)
28 3p4l_A Neogenin; iron homeosta 99.9 7.5E-23 2.5E-27 201.0 21.7 193 620-814 4-205 (211)
29 3p4l_A Neogenin; iron homeosta 99.9 2.4E-22 8.2E-27 197.4 23.6 193 479-714 2-205 (211)
30 1n26_A IL-6 receptor alpha cha 99.9 1.9E-21 6.4E-26 204.7 31.3 265 107-575 9-295 (325)
31 3f7q_A Integrin beta-4, GP150; 99.9 3E-22 1E-26 200.0 21.3 193 620-818 5-204 (234)
32 3s98_A Interferon alpha/beta r 99.9 3.2E-22 1.1E-26 207.3 21.5 266 620-894 3-302 (306)
33 2q7n_A Leukemia inhibitory fac 99.9 1.1E-21 3.9E-26 213.0 26.7 121 103-238 202-330 (488)
34 1cfb_A Drosophila neuroglian; 99.9 1.2E-21 4.1E-26 191.4 24.1 192 480-714 4-204 (205)
35 3lb6_C IL-13, interleukin-13 r 99.9 7.7E-22 2.6E-26 210.6 24.0 303 451-814 8-336 (380)
36 2vkw_A Neural cell adhesion mo 99.9 8.9E-22 3E-26 193.0 22.0 189 618-812 6-202 (209)
37 2ibg_A CG9211-PA, GH03927P; IH 99.9 1.8E-21 6.3E-26 191.7 22.3 190 621-813 2-212 (214)
38 2gys_A Cytokine receptor commo 99.9 1.6E-20 5.3E-25 205.0 31.7 305 446-811 78-418 (419)
39 3bpo_C Interleukin-13 receptor 99.9 4.3E-21 1.5E-25 200.9 26.1 276 483-813 5-312 (314)
40 2nzi_A Titin; IG-domain, FNIII 99.9 1.6E-20 5.6E-25 196.6 29.7 272 102-575 2-290 (305)
41 2vkw_A Neural cell adhesion mo 99.9 4E-21 1.4E-25 188.3 22.3 187 480-712 7-202 (209)
42 2ibg_A CG9211-PA, GH03927P; IH 99.9 8E-21 2.7E-25 187.1 22.3 189 483-713 3-212 (214)
43 2q7n_A Leukemia inhibitory fac 99.9 1.2E-19 4E-24 197.2 32.6 457 202-814 5-487 (488)
44 3lpw_A A77-A78 domain from tit 99.9 1.1E-20 3.7E-25 183.6 21.5 185 480-707 4-190 (197)
45 2nzi_A Titin; IG-domain, FNIII 99.9 2.4E-20 8.1E-25 195.4 25.5 246 35-290 19-291 (305)
46 3lpw_A A77-A78 domain from tit 99.9 1.9E-20 6.7E-25 181.8 20.7 183 620-806 5-189 (197)
47 3mtr_A N-CAM-1, NCAM-1, neural 99.9 5.3E-20 1.8E-24 181.3 23.3 180 101-291 16-211 (215)
48 3bpo_C Interleukin-13 receptor 99.8 2E-19 7E-24 188.1 27.1 226 443-712 56-311 (314)
49 2gee_A Hypothetical protein; f 99.8 1.6E-19 5.5E-24 175.4 22.6 174 577-804 21-197 (203)
50 1qr4_A Protein (tenascin); fib 99.8 9.5E-20 3.2E-24 174.7 20.7 181 618-814 4-185 (186)
51 1bqu_A Protein (GP130); cytoki 99.8 7.5E-20 2.5E-24 180.2 17.6 192 579-817 7-209 (215)
52 1i1r_A GP130, interleukin-6 re 99.8 3.7E-19 1.3E-23 185.5 23.8 228 538-814 64-302 (303)
53 1bqu_A Protein (GP130); cytoki 99.8 3.6E-20 1.2E-24 182.5 15.2 196 480-720 6-212 (215)
54 2ha1_A Fibronectin; beta sandw 99.8 1.1E-19 3.7E-24 176.7 18.3 175 622-805 1-195 (201)
55 2gys_A Cytokine receptor commo 99.8 1.2E-18 4.1E-23 190.1 28.1 366 203-711 5-418 (419)
56 3fl7_A Ephrin receptor; ATP-bi 99.8 2.8E-19 9.6E-24 195.3 21.6 211 455-713 310-533 (536)
57 2gee_A Hypothetical protein; f 99.8 1.4E-18 4.7E-23 168.8 23.5 171 484-704 25-197 (203)
58 1qr4_A Protein (tenascin); fib 99.8 1.6E-18 5.4E-23 166.1 22.4 177 480-712 5-183 (186)
59 3lb6_C IL-13, interleukin-13 r 99.8 9.2E-19 3.1E-23 186.8 22.9 225 445-714 93-336 (380)
60 1e07_A Carcinoembryonic antige 99.8 6.9E-15 2.4E-19 171.1 56.2 533 66-708 75-637 (642)
61 2ha1_A Fibronectin; beta sandw 99.8 1.2E-18 4.2E-23 169.3 19.4 172 484-704 2-194 (201)
62 3b43_A Titin; I-SET IG fold, e 99.8 1.2E-16 4E-21 182.5 38.8 235 35-279 20-279 (570)
63 3fl7_A Ephrin receptor; ATP-bi 99.8 7.8E-19 2.7E-23 191.8 18.2 185 620-814 333-534 (536)
64 3b43_A Titin; I-SET IG fold, e 99.8 1.8E-16 6E-21 181.1 38.3 172 102-280 3-184 (570)
65 1e07_A Carcinoembryonic antige 99.8 1.4E-14 4.8E-19 168.5 51.0 485 36-573 127-638 (642)
66 3e0g_A Leukemia inhibitory fac 99.8 2.8E-17 9.7E-22 176.8 24.5 430 207-714 2-482 (483)
67 3n06_B PRL-R, prolactin recept 99.8 2.1E-17 7.2E-22 161.6 21.3 192 579-815 3-206 (210)
68 3n06_B PRL-R, prolactin recept 99.8 4.2E-17 1.4E-21 159.4 21.5 192 480-714 2-205 (210)
69 2d9q_B Granulocyte colony-stim 99.8 3.3E-17 1.1E-21 171.5 21.3 230 539-817 61-311 (313)
70 3e0g_A Leukemia inhibitory fac 99.7 6.6E-17 2.2E-21 173.9 22.8 366 439-814 44-482 (483)
71 3dmk_A DOWN syndrome cell adhe 99.7 6.1E-15 2.1E-19 176.8 41.2 682 102-888 36-805 (816)
72 1cd9_B G-CSF-R, protein (G-CSF 99.7 4.7E-17 1.6E-21 159.9 17.4 190 579-814 4-214 (215)
73 1cd9_B G-CSF-R, protein (G-CSF 99.7 1.3E-16 4.3E-21 156.8 18.4 192 480-714 3-214 (215)
74 3dmk_A DOWN syndrome cell adhe 99.7 7.9E-15 2.7E-19 175.9 32.2 261 2-279 320-606 (816)
75 4go6_B HCF C-terminal chain 1; 99.7 5.7E-17 2E-21 160.3 10.3 167 647-816 18-204 (232)
76 1n26_A IL-6 receptor alpha cha 99.7 1.8E-13 6E-18 143.7 33.0 262 494-814 20-298 (325)
77 4go6_B HCF C-terminal chain 1; 99.6 3E-16 1E-20 155.1 10.7 182 508-711 18-199 (232)
78 2ed9_A Netrin receptor DCC; tu 99.6 6.7E-16 2.3E-20 136.3 11.8 121 691-814 3-124 (124)
79 3lqm_A Interleukin-10 receptor 99.6 1E-14 3.6E-19 140.1 18.1 181 483-714 3-196 (201)
80 2ee2_A Contactin-1; neural cel 99.6 6.2E-15 2.1E-19 128.7 14.6 115 699-817 1-116 (119)
81 2edx_A Protein tyrosine phosph 99.6 1.1E-14 3.6E-19 130.7 16.4 128 464-592 1-133 (134)
82 2dbj_A Proto-oncogene tyrosine 99.6 6E-15 2E-19 129.7 13.8 116 699-814 1-118 (124)
83 2edx_A Protein tyrosine phosph 99.6 1.1E-14 3.7E-19 130.6 15.8 118 699-816 1-120 (134)
84 1wfo_A Sidekick 2; FN3, cell a 99.6 1.9E-15 6.6E-20 134.5 10.4 123 691-816 2-126 (130)
85 2rik_A Titin; I-SET IG fold, p 99.6 1.3E-13 4.5E-18 142.2 25.4 245 102-362 3-273 (284)
86 3d85_D IL-12B, interleukin-12 99.6 1.3E-13 4.4E-18 141.6 24.9 114 452-573 185-303 (306)
87 1wj3_A KIAA1496 protein; beta 99.6 1E-14 3.5E-19 126.0 13.9 113 699-816 1-113 (117)
88 3lqm_A Interleukin-10 receptor 99.6 1.6E-14 5.6E-19 138.8 16.5 183 621-814 2-196 (201)
89 2dlh_A Receptor-type tyrosine- 99.6 4.3E-15 1.5E-19 130.5 11.3 120 464-583 1-120 (121)
90 2rik_A Titin; I-SET IG fold, p 99.6 7.2E-14 2.5E-18 144.1 22.3 230 36-279 21-274 (284)
91 2ocw_A Polymeric-immunoglobuli 99.6 7.7E-12 2.6E-16 143.7 40.4 232 69-321 82-359 (585)
92 1wfo_A Sidekick 2; FN3, cell a 99.6 1.6E-14 5.3E-19 128.6 13.4 125 457-583 3-129 (130)
93 2ed9_A Netrin receptor DCC; tu 99.6 1.5E-14 5.3E-19 127.4 12.8 119 456-577 3-123 (124)
94 2ee2_A Contactin-1; neural cel 99.6 5.8E-14 2E-18 122.5 16.3 116 464-582 1-117 (119)
95 3knb_B Obscurin-like protein 1 99.6 1.2E-14 4.1E-19 123.1 11.3 88 102-191 11-104 (107)
96 3kld_A Contactin 4, axcam, BIG 99.6 2.5E-14 8.6E-19 154.5 16.3 220 48-280 131-374 (384)
97 2dlh_A Receptor-type tyrosine- 99.6 7.6E-15 2.6E-19 128.9 9.1 117 699-817 1-118 (121)
98 2ocw_A Polymeric-immunoglobuli 99.6 8.7E-11 3E-15 134.9 45.4 192 110-317 6-241 (585)
99 1axi_B HGHBP, growth hormone r 99.6 5.2E-14 1.8E-18 138.9 15.7 187 620-813 29-235 (236)
100 1x5h_A Neogenin; RGM binding, 99.5 1E-14 3.5E-19 130.3 9.2 115 699-814 1-116 (132)
101 2dbj_A Proto-oncogene tyrosine 99.5 6.3E-14 2.2E-18 123.1 14.0 115 464-578 1-118 (124)
102 1x5z_A Receptor-type tyrosine- 99.5 2.2E-14 7.5E-19 124.6 10.8 115 563-720 1-115 (115)
103 1x3d_A Fibronectin type-III do 99.5 9.9E-14 3.4E-18 120.9 14.9 117 464-583 1-117 (118)
104 1uen_A KIAA0343 protein; immun 99.5 3.1E-14 1.1E-18 125.7 10.9 114 704-817 2-122 (125)
105 1x3d_A Fibronectin type-III do 99.5 8.5E-14 2.9E-18 121.3 12.8 115 563-718 1-116 (118)
106 3qs9_E FL cytokine receptor; i 99.5 6.7E-13 2.3E-17 148.4 23.0 180 2-191 205-413 (527)
107 2ec8_A MAST/stem cell growth f 99.5 6.3E-13 2.2E-17 150.4 22.6 328 36-371 130-508 (524)
108 1va9_A DOWN syndrome cell adhe 99.5 7E-14 2.4E-18 122.9 10.9 114 704-817 3-120 (122)
109 1x5h_A Neogenin; RGM binding, 99.5 9.5E-14 3.2E-18 123.9 11.7 121 464-587 1-131 (132)
110 3qs9_E FL cytokine receptor; i 99.5 7.6E-13 2.6E-17 147.9 21.7 258 2-280 117-405 (527)
111 1axi_B HGHBP, growth hormone r 99.5 1.7E-13 5.7E-18 135.3 14.4 191 480-713 28-235 (236)
112 2v5m_A Dscam; neurobiology SPL 99.5 4E-13 1.4E-17 145.6 18.9 263 2-280 79-380 (388)
113 2cqv_A MLCK, myosin light chai 99.5 1.8E-13 6.1E-18 118.4 12.9 97 102-207 5-107 (114)
114 3knb_A Titin; IG-like, titin, 99.5 8.5E-14 2.9E-18 116.4 9.8 87 103-191 4-98 (100)
115 1x4x_A Fibronectin type-III do 99.5 3E-13 1E-17 114.8 13.0 100 480-583 6-105 (106)
116 3n1f_C Cell adhesion molecule- 99.5 2E-13 7E-18 114.4 11.7 98 715-812 3-102 (102)
117 1va9_A DOWN syndrome cell adhe 99.5 2.2E-13 7.6E-18 119.6 12.6 116 468-583 2-122 (122)
118 2j8h_A Titin, connectin; cardi 99.5 6.8E-13 2.3E-17 128.2 16.4 170 102-279 2-187 (197)
119 2yd6_A PTPRD protein; hydrolas 99.5 1.2E-12 4.2E-17 128.0 18.4 173 102-280 4-194 (212)
120 1x5z_A Receptor-type tyrosine- 99.5 1.1E-13 3.9E-18 120.0 9.7 112 699-817 1-112 (115)
121 2crm_A Fibronectin type-III do 99.5 4E-13 1.4E-17 117.3 13.2 116 464-582 1-118 (120)
122 3laf_A Deleted in colorectal c 99.5 5.6E-13 1.9E-17 145.4 17.6 233 36-280 137-392 (403)
123 3kld_A Contactin 4, axcam, BIG 99.5 4.2E-13 1.4E-17 144.9 16.3 150 35-191 220-382 (384)
124 2ede_A Netrin receptor DCC; tu 99.5 7.4E-13 2.5E-17 114.5 14.5 105 476-580 3-110 (114)
125 1wj3_A KIAA1496 protein; beta 99.5 7E-13 2.4E-17 114.3 14.2 112 464-581 1-114 (117)
126 3laf_A Deleted in colorectal c 99.5 9.6E-13 3.3E-17 143.5 19.0 305 35-362 36-390 (403)
127 3p3y_A Neurofascin; IG domains 99.5 7.8E-13 2.7E-17 144.3 17.9 236 36-280 132-394 (404)
128 1x5f_A Neogenin; RGM binding, 99.5 2E-13 6.8E-18 119.4 10.5 114 700-816 2-116 (120)
129 1x4y_A Biregional cell adhesio 99.5 4.3E-13 1.5E-17 115.7 12.5 104 713-816 5-110 (114)
130 2edd_A Netrin receptor DCC; tu 99.5 3.6E-13 1.2E-17 117.3 12.0 113 701-817 3-121 (123)
131 1cs6_A Axonin-1; neural cell a 99.5 7.9E-13 2.7E-17 142.9 17.5 232 37-280 118-373 (382)
132 3qt2_A Interleukin-5 receptor 99.5 3.5E-11 1.2E-15 123.2 28.6 271 482-809 12-313 (317)
133 2crm_A Fibronectin type-III do 99.5 3.4E-13 1.2E-17 117.8 11.6 115 563-717 1-117 (120)
134 2ede_A Netrin receptor DCC; tu 99.5 5.5E-13 1.9E-17 115.3 12.8 104 711-816 3-110 (114)
135 1x5i_A Neogenin; RGM binding, 99.5 4.6E-13 1.6E-17 117.6 12.0 111 696-814 2-119 (126)
136 1wio_A CD4, T-cell surface gly 99.4 5E-13 1.7E-17 143.2 14.5 228 2-275 81-350 (363)
137 2yrz_A Integrin beta-4; GP150, 99.4 2.5E-13 8.4E-18 118.4 9.8 113 700-818 2-117 (118)
138 2e7h_A Ephrin type-B receptor 99.4 5.7E-13 1.9E-17 113.9 11.9 101 710-814 2-103 (109)
139 1uen_A KIAA0343 protein; immun 99.4 5.8E-13 2E-17 117.5 12.4 114 469-582 2-123 (125)
140 1x5g_A Neogenin; RGM binding, 99.4 7.3E-13 2.5E-17 115.0 12.8 111 565-717 1-113 (116)
141 2wv3_A Neuroplastin; igcam, me 99.4 4E-12 1.4E-16 121.9 19.2 164 103-280 2-181 (190)
142 2ed7_A Netrin receptor DCC; tu 99.4 8.9E-13 3E-17 115.1 13.2 106 707-816 9-115 (119)
143 1wfn_A Sidekick 2; FN3, cell a 99.4 4E-13 1.4E-17 117.2 10.9 105 699-807 1-106 (119)
144 1x5g_A Neogenin; RGM binding, 99.4 1.4E-12 4.6E-17 113.3 14.0 113 467-583 2-115 (116)
145 2djs_A Ephrin type-B receptor 99.4 1.2E-12 4E-17 111.9 13.4 101 710-815 2-103 (108)
146 2a38_A Titin; Z1Z2, structural 99.4 5.4E-13 1.8E-17 128.6 12.5 170 102-279 3-185 (194)
147 2ec8_A MAST/stem cell growth f 99.4 3.2E-12 1.1E-16 144.6 20.8 307 36-362 52-400 (524)
148 1eer_B Epobp, erythropoietin r 99.4 1.1E-12 3.7E-17 129.2 14.8 187 581-813 22-223 (227)
149 2wim_A N-CAM 2, NCAM2, neural 99.4 3E-12 1E-16 132.4 18.9 231 36-282 20-277 (291)
150 2va4_A NCAM2, N-CAM 2, neural 99.4 1.2E-12 4.2E-17 125.8 14.8 166 104-279 2-183 (192)
151 1qz1_A Neural cell adhesion mo 99.4 1.8E-12 6.1E-17 134.1 17.1 231 36-279 18-280 (291)
152 1x4x_A Fibronectin type-III do 99.4 1.4E-12 4.7E-17 110.7 13.2 102 575-718 3-104 (106)
153 2edd_A Netrin receptor DCC; tu 99.4 1.6E-12 5.4E-17 113.2 13.8 114 466-581 3-121 (123)
154 3lcy_A Titin; A-BAND, IG tande 99.4 1.7E-12 6E-17 125.3 15.3 172 101-279 4-186 (197)
155 4doh_R Interleukin-20 receptor 99.4 4.5E-12 1.6E-16 123.0 18.0 190 620-815 8-215 (221)
156 3qs7_E FL cytokine receptor; i 99.4 1.6E-12 5.6E-17 141.2 16.5 257 2-280 117-405 (423)
157 4doh_B Interleukin-20 receptor 99.4 6.1E-12 2.1E-16 120.7 18.3 183 620-813 6-200 (206)
158 2v5m_A Dscam; neurobiology SPL 99.4 3.1E-12 1.1E-16 138.6 18.3 249 104-363 3-296 (388)
159 1bih_A Hemolin; insect immunit 99.4 1.1E-12 3.8E-17 142.6 14.2 161 103-279 213-386 (395)
160 2haz_A N-CAM 1, neural cell ad 99.4 1.3E-12 4.4E-17 110.6 11.5 98 712-813 3-104 (105)
161 3oq3_B IFN-alpha/beta binding 99.4 1.9E-12 6.4E-17 136.5 15.5 230 35-279 44-320 (329)
162 1x5l_A Ephrin type-A receptor 99.4 1.5E-12 5E-17 112.0 12.0 104 707-815 2-106 (111)
163 1wit_A Twitchin 18TH IGSF modu 99.4 1E-12 3.6E-17 108.7 10.7 87 103-191 1-93 (93)
164 4doh_R Interleukin-20 receptor 99.4 5.3E-12 1.8E-16 122.6 17.3 193 483-714 10-214 (221)
165 1wfn_A Sidekick 2; FN3, cell a 99.4 1.2E-12 4.2E-17 114.1 11.5 104 563-707 1-106 (119)
166 1x5f_A Neogenin; RGM binding, 99.4 1.8E-12 6.3E-17 113.2 12.7 110 566-716 4-116 (120)
167 1wis_A KIAA1514 protein; FNIII 99.4 1.5E-12 5.3E-17 114.1 12.0 114 468-582 5-123 (124)
168 2wim_A N-CAM 2, NCAM2, neural 99.4 2.7E-11 9.2E-16 125.2 23.5 247 103-362 3-273 (291)
169 2ed7_A Netrin receptor DCC; tu 99.4 5.1E-12 1.7E-16 110.2 15.2 107 470-580 7-115 (119)
170 2ed8_A Netrin receptor DCC; tu 99.4 1.3E-12 4.6E-17 111.1 11.0 99 712-817 4-103 (106)
171 2yd9_A Receptor-type tyrosine- 99.4 8.4E-12 2.9E-16 130.0 19.5 235 36-280 22-282 (304)
172 2yd1_A Tyrosine-protein phosph 99.4 9.5E-12 3.2E-16 121.7 18.7 169 102-280 4-190 (212)
173 1x5i_A Neogenin; RGM binding, 99.4 1.3E-12 4.4E-17 114.7 11.2 111 561-714 3-119 (126)
174 3n1f_C Cell adhesion molecule- 99.4 2.9E-12 9.9E-17 107.3 12.8 96 480-575 3-101 (102)
175 2dm4_A Sortilin-related recept 99.4 2.3E-12 7.9E-17 110.0 12.5 99 713-817 5-105 (108)
176 1x4z_A Biregional cell adhesio 99.4 3.1E-12 1.1E-16 111.8 13.3 114 701-817 3-119 (121)
177 4doh_B Interleukin-20 receptor 99.4 9.5E-12 3.2E-16 119.4 17.8 178 483-712 8-199 (206)
178 3p3y_A Neurofascin; IG domains 99.4 2.3E-11 7.8E-16 132.6 23.3 315 35-362 32-392 (404)
179 2dju_A Receptor-type tyrosine- 99.4 3E-12 1E-16 109.0 12.8 74 647-720 32-106 (106)
180 2e7h_A Ephrin type-B receptor 99.4 6E-12 2E-16 107.5 14.4 100 477-578 4-103 (109)
181 2crz_A Fibronectin type-III do 99.4 4.1E-12 1.4E-16 108.7 13.4 101 480-583 7-109 (110)
182 1x4y_A Biregional cell adhesio 99.4 4.1E-12 1.4E-16 109.6 13.4 102 479-580 6-110 (114)
183 1bih_A Hemolin; insect immunit 99.4 1.3E-11 4.5E-16 134.0 20.8 167 100-279 2-190 (395)
184 2djs_A Ephrin type-B receptor 99.4 4E-12 1.4E-16 108.5 13.0 100 575-715 3-103 (108)
185 1wio_A CD4, T-cell surface gly 99.4 5.7E-12 2E-16 134.9 17.2 214 115-359 106-350 (363)
186 2yd9_A Receptor-type tyrosine- 99.4 4E-12 1.4E-16 132.4 15.5 173 101-280 3-191 (304)
187 2ed8_A Netrin receptor DCC; tu 99.4 4E-12 1.4E-16 108.1 12.7 99 577-717 5-103 (106)
188 1x5x_A Fibronectin type-III do 99.4 4.4E-12 1.5E-16 108.4 13.0 101 481-583 7-108 (109)
189 2crz_A Fibronectin type-III do 99.4 4.6E-12 1.6E-16 108.5 13.0 104 575-718 4-108 (110)
190 1uey_A KIAA0343 protein; immun 99.4 5.6E-12 1.9E-16 111.3 13.7 118 467-588 4-125 (127)
191 1f97_A Junction adhesion molec 99.4 1.3E-11 4.4E-16 120.8 17.8 171 105-288 2-204 (212)
192 1uey_A KIAA0343 protein; immun 99.4 4.3E-12 1.5E-16 112.0 12.6 106 578-725 15-125 (127)
193 3v6o_A Leptin receptor; recept 99.4 3.2E-11 1.1E-15 116.4 19.8 126 674-805 68-197 (206)
194 2dm4_A Sortilin-related recept 99.4 6.3E-12 2.2E-16 107.2 13.2 98 482-583 8-107 (108)
195 2kkq_A Myotilin; unknown funct 99.4 4.2E-12 1.4E-16 109.7 12.2 89 101-191 12-108 (116)
196 1x5j_A Neogenin; RGM binding, 99.4 1.5E-12 5.2E-17 111.3 9.2 100 714-817 6-111 (113)
197 1wfu_A Unnamed protein product 99.4 6.2E-12 2.1E-16 107.6 12.8 101 477-580 11-116 (120)
198 3qp3_A Titin; I-SET IG-like, s 99.4 4E-12 1.4E-16 107.6 11.6 90 100-191 4-99 (103)
199 2dm2_A Palladin; beta-sandwich 99.4 3.2E-12 1.1E-16 109.7 10.8 95 102-205 6-108 (110)
200 2e3v_A Neural cell adhesion mo 99.4 7.6E-12 2.6E-16 109.1 13.4 104 711-818 3-111 (122)
201 2v5t_A NCAM2, N-CAM 2, neural 99.4 2.7E-12 9.3E-17 123.0 11.6 167 104-280 2-179 (189)
202 1x4z_A Biregional cell adhesio 99.4 1.2E-11 3.9E-16 108.1 14.6 98 480-579 16-117 (121)
203 1v5j_A KIAA1355 protein, RSGI 99.4 8.6E-13 2.9E-17 110.3 6.8 92 718-813 9-101 (108)
204 1wis_A KIAA1514 protein; FNIII 99.4 3.3E-12 1.1E-16 112.0 10.9 110 568-718 6-123 (124)
205 2c5d_C AXL oncogene, tyrosine- 99.4 1.2E-11 4E-16 119.2 16.0 162 103-279 1-182 (195)
206 2ckn_A Basic fibroblast growth 99.4 3.7E-12 1.3E-16 105.7 10.7 86 102-190 7-94 (95)
207 1g1c_A Immunoglobulin-like dom 99.3 4.4E-12 1.5E-16 106.4 11.1 88 102-191 3-97 (99)
208 2y25_A Myomesin; structural pr 99.3 3.6E-12 1.2E-16 133.7 13.0 240 30-280 16-306 (317)
209 2edy_A Receptor-type tyrosine- 99.3 1.1E-12 3.6E-17 111.2 7.1 99 711-813 3-102 (103)
210 2dn7_A Receptor-type tyrosine- 99.3 3.8E-12 1.3E-16 108.5 10.7 102 711-819 3-105 (107)
211 1x5l_A Ephrin type-A receptor 99.3 5.3E-12 1.8E-16 108.5 11.5 103 572-715 3-106 (111)
212 2y25_A Myomesin; structural pr 99.3 3.9E-12 1.3E-16 133.5 12.9 165 102-279 5-190 (317)
213 2yrz_A Integrin beta-4; GP150, 99.3 7.8E-12 2.7E-16 108.8 12.5 108 465-577 2-112 (118)
214 2edb_A Netrin receptor DCC; tu 99.3 6.5E-12 2.2E-16 108.3 11.8 105 706-818 7-113 (116)
215 4dep_C Interleukin-1 receptor 99.3 6.3E-12 2.2E-16 133.9 14.3 233 48-285 46-329 (349)
216 1x5j_A Neogenin; RGM binding, 99.3 6E-12 2.1E-16 107.6 11.3 98 620-717 8-111 (113)
217 3g9v_A Interleukin 22 receptor 99.3 1.8E-12 6E-17 124.8 8.8 184 621-810 8-209 (211)
218 2dju_A Receptor-type tyrosine- 99.3 1.9E-11 6.4E-16 104.0 14.1 100 199-298 6-106 (106)
219 1qz1_A Neural cell adhesion mo 99.3 2.6E-11 9E-16 125.3 18.0 248 104-362 2-279 (291)
220 1ry7_B FGFR-3, fibroblast grow 99.3 5.1E-12 1.7E-16 133.7 12.9 246 36-287 24-325 (334)
221 3g9v_A Interleukin 22 receptor 99.3 3.1E-12 1.1E-16 123.0 10.1 184 483-705 9-204 (211)
222 2rcj_C Light chain; immunoglob 99.3 3.5E-10 1.2E-14 127.7 28.8 235 36-279 16-306 (523)
223 3p2t_A Leukocyte immunoglobuli 99.3 3.8E-11 1.3E-15 115.6 17.9 160 103-277 4-179 (196)
224 2o26_X MAST/stem cell growth f 99.3 1.7E-11 5.9E-16 126.6 16.5 224 36-279 28-278 (290)
225 2yr3_A Myosin light chain kina 99.3 2.6E-12 8.8E-17 107.8 8.3 89 100-190 7-98 (99)
226 1x5x_A Fibronectin type-III do 99.3 1.1E-11 3.6E-16 106.0 12.2 100 578-718 6-107 (109)
227 1cs6_A Axonin-1; neural cell a 99.3 2.8E-11 9.7E-16 130.7 18.6 150 35-191 222-381 (382)
228 2gi7_A GPVI protein; IG-like d 99.3 3.7E-11 1.3E-15 114.2 17.2 156 102-278 6-169 (184)
229 2eo9_A Roundabout homolog 1; b 99.3 5.1E-12 1.7E-16 109.9 10.2 88 102-191 6-97 (118)
230 1wk0_A KIAA0970 protein; fibro 99.3 9.2E-12 3.1E-16 108.6 11.7 108 483-592 19-135 (137)
231 2iep_A Muscle-specific kinase 99.3 8.8E-12 3E-16 119.7 13.0 165 102-279 5-179 (192)
232 2e3v_A Neural cell adhesion mo 99.3 1.6E-11 5.4E-16 107.1 13.3 103 577-721 5-113 (122)
233 2edj_A Roundabout homolog 2; K 99.3 6.9E-12 2.3E-16 105.4 10.6 89 101-191 5-97 (100)
234 1v5j_A KIAA1355 protein, RSGI 99.3 2.2E-12 7.7E-17 107.8 7.4 93 480-577 6-101 (108)
235 2dm3_A KIAA0992 protein, palla 99.3 4.6E-12 1.6E-16 108.7 9.7 95 102-205 7-108 (110)
236 1eer_B Epobp, erythropoietin r 99.3 4.1E-11 1.4E-15 117.9 17.8 186 483-713 22-223 (227)
237 3bp6_B Programmed cell death 1 99.3 1.4E-11 4.7E-16 119.4 14.2 161 108-279 6-183 (202)
238 2edb_A Netrin receptor DCC; tu 99.3 2E-11 6.7E-16 105.3 13.4 106 473-583 9-114 (116)
239 3puc_A Titin; I-SET IG-like do 99.3 9.8E-12 3.4E-16 104.3 11.2 89 101-191 3-97 (99)
240 3kvq_A Vascular endothelial gr 99.3 5.1E-12 1.7E-16 108.0 9.5 89 101-191 7-99 (108)
241 3irg_B Obscurin-like protein 1 99.3 8.6E-12 2.9E-16 106.4 10.8 89 101-191 10-104 (107)
242 3v6o_A Leptin receptor; recept 99.3 1E-10 3.4E-15 112.9 19.5 178 484-705 3-197 (206)
243 1vca_A VCAM-D1,2, human vascul 99.3 2.5E-11 8.5E-16 117.1 15.3 162 109-279 5-180 (202)
244 4fa8_A Secreted protein BARF1; 99.3 9.4E-12 3.2E-16 119.6 11.9 156 115-279 3-192 (203)
245 3ejj_X Macrophage colony-stimu 99.3 7.4E-11 2.5E-15 121.8 19.6 224 36-280 20-272 (289)
246 2e7c_A Myosin-binding protein 99.3 1.1E-11 3.7E-16 107.8 11.2 89 101-191 18-114 (118)
247 3ojm_B Fibroblast growth facto 99.3 9.7E-12 3.3E-16 123.5 12.5 181 102-288 13-220 (231)
248 2kdg_A Myotilin; immonoglobuli 99.3 7.6E-12 2.6E-16 105.2 9.8 88 102-191 3-97 (100)
249 1itb_B Type 1 interleukin-1 re 99.3 2.5E-11 8.5E-16 127.1 16.0 189 2-191 76-313 (315)
250 3t04_D Monobody 7C12; engineer 99.3 2.9E-11 1E-15 101.4 13.2 89 718-810 9-100 (103)
251 2vr9_A Roundabout 1, ROBO; imm 99.3 1.6E-11 5.5E-16 120.6 13.4 173 102-286 7-203 (217)
252 2dn7_A Receptor-type tyrosine- 99.3 2E-11 6.9E-16 104.0 12.2 102 477-584 4-106 (107)
253 3rbs_A Myomesin-1; immunoglobu 99.3 1.9E-11 6.3E-16 118.3 13.4 86 103-191 116-206 (207)
254 3v2a_R Vascular endothelial gr 99.3 9.5E-12 3.2E-16 148.3 13.9 171 104-282 223-410 (772)
255 2yd1_A Tyrosine-protein phosph 99.3 6.5E-11 2.2E-15 115.7 17.5 154 36-191 22-199 (212)
256 2db8_A Tripartite motif protei 99.3 9.3E-12 3.2E-16 106.1 9.9 97 480-579 9-105 (110)
257 1ugn_A LIR1, leukocyte immunog 99.3 9.8E-11 3.4E-15 112.9 18.5 161 102-277 3-181 (198)
258 2d3v_A Leukocyte immunoglobuli 99.3 4.9E-11 1.7E-15 114.8 16.2 160 102-277 3-180 (196)
259 2dav_A SLOW MYBP-C, myosin-bin 99.3 1.3E-11 4.3E-16 105.9 10.5 86 105-191 8-110 (126)
260 3rjd_A High affinity immunoglo 99.3 2.2E-10 7.4E-15 116.2 21.9 218 36-279 17-249 (262)
261 3grw_A Fibroblast growth facto 99.3 3.7E-11 1.3E-15 120.2 15.8 174 102-280 9-209 (241)
262 3rbs_A Myomesin-1; immunoglobu 99.3 1.4E-11 4.7E-16 119.3 11.9 167 104-279 3-197 (207)
263 4dkd_C Macrophage colony-stimu 99.3 3.2E-11 1.1E-15 124.7 15.4 224 36-279 20-271 (292)
264 1x5a_A Ephrin type-A receptor 99.3 2.7E-11 9.3E-16 102.5 12.1 96 710-814 4-101 (107)
265 2haz_A N-CAM 1, neural cell ad 99.3 3.4E-11 1.2E-15 101.8 12.7 95 577-713 4-104 (105)
266 2w1n_A O-GLCNACASE NAGJ; hexos 99.3 1.8E-10 6E-15 103.8 17.5 120 673-812 116-237 (238)
267 1u2h_A APEG-1, aortic preferen 99.3 1.6E-11 5.5E-16 103.0 10.5 88 102-191 3-97 (99)
268 1he7_A High affinity nerve gro 99.3 2.1E-11 7.3E-16 104.3 11.3 84 102-191 2-98 (126)
269 1wk0_A KIAA0970 protein; fibro 99.3 1.8E-11 6E-16 106.8 10.9 108 620-728 17-134 (137)
270 1uem_A KIAA1568 protein; immun 99.3 2.2E-11 7.4E-16 105.8 11.5 101 480-582 14-116 (117)
271 2o26_X MAST/stem cell growth f 99.3 1.6E-10 5.4E-15 119.3 20.0 238 102-362 10-277 (290)
272 1rhf_A Tyrosine-protein kinase 99.3 5.1E-11 1.8E-15 113.2 15.0 162 104-279 2-172 (182)
273 1wf5_A Sidekick 2 protein; FNI 99.3 4.1E-11 1.4E-15 104.7 13.0 110 464-581 4-119 (121)
274 1ujt_A KIAA1568 protein; fibro 99.3 2.7E-11 9.3E-16 103.8 11.5 92 723-817 22-118 (120)
275 2yuz_A Myosin-binding protein 99.3 1.8E-11 6.2E-16 102.1 10.1 84 102-191 5-94 (100)
276 1uct_A Immunoglobulin alpha FC 99.3 6.8E-11 2.3E-15 115.5 15.9 174 102-290 7-197 (218)
277 1fhg_A Telokin; immunoglobulin 99.3 2.4E-11 8.3E-16 111.2 11.8 92 98-191 35-133 (154)
278 2edy_A Receptor-type tyrosine- 99.3 6.9E-12 2.3E-16 106.1 7.5 97 476-576 3-101 (103)
279 1x5a_A Ephrin type-A receptor 99.3 5.9E-11 2E-15 100.4 13.2 95 575-714 5-101 (107)
280 2wv3_A Neuroplastin; igcam, me 99.3 1.2E-10 4.2E-15 111.4 17.3 148 36-191 19-189 (190)
281 3cx2_A Myosin-binding protein 99.3 3.4E-11 1.2E-15 102.6 11.8 87 104-191 4-107 (108)
282 2db8_A Tripartite motif protei 99.3 1.4E-11 4.7E-16 105.1 9.3 90 626-715 16-105 (110)
283 1ry7_B FGFR-3, fibroblast grow 99.3 4.4E-12 1.5E-16 134.2 7.7 245 111-362 15-316 (334)
284 1nct_A Titin; cell adhesion, g 99.3 6.8E-12 2.3E-16 106.4 7.2 89 101-191 11-105 (106)
285 1itb_B Type 1 interleukin-1 re 99.3 3.9E-11 1.3E-15 125.6 14.4 235 36-280 21-305 (315)
286 1wwb_X Protein (brain derived 99.3 2.5E-11 8.5E-16 102.1 10.4 85 102-191 2-97 (103)
287 1nbq_A JAM, junctional adhesio 99.3 5.1E-11 1.7E-15 116.2 14.3 167 103-279 3-197 (209)
288 3k0w_A Mucosa-associated lymph 99.3 9.9E-11 3.4E-15 114.8 16.3 171 102-289 16-200 (218)
289 1wfu_A Unnamed protein product 99.3 3.9E-11 1.3E-15 102.6 11.6 96 620-715 15-115 (120)
290 3qs7_E FL cytokine receptor; i 99.3 3.6E-11 1.2E-15 130.6 14.4 188 2-206 205-421 (423)
291 1uem_A KIAA1568 protein; immun 99.3 1.8E-11 6.1E-16 106.3 9.7 104 711-818 11-116 (117)
292 2ee3_A Collagen alpha-1(XX) ch 99.3 2.4E-11 8.3E-16 102.1 10.1 90 715-812 6-96 (108)
293 1oll_A NK receptor; immune sys 99.2 1.8E-10 6.3E-15 109.8 17.5 170 103-287 3-184 (188)
294 2v44_A NCAM2, neural cell adhe 99.2 2.3E-10 7.7E-15 109.4 18.2 159 107-278 5-176 (189)
295 1wf5_A Sidekick 2 protein; FNI 99.2 2.2E-11 7.7E-16 106.4 10.2 113 698-817 3-119 (121)
296 3vh8_G Killer cell immunoglobu 99.2 8.3E-10 2.8E-14 115.4 24.1 163 101-278 21-199 (316)
297 2a38_A Titin; Z1Z2, structural 99.2 7.3E-11 2.5E-15 113.4 14.7 152 36-191 21-194 (194)
298 2j8h_A Titin, connectin; cardi 99.2 4.5E-11 1.5E-15 115.3 13.2 154 36-191 20-196 (197)
299 3t04_D Monobody 7C12; engineer 99.2 8.3E-11 2.8E-15 98.7 13.0 90 620-710 7-100 (103)
300 3grw_A Fibroblast growth facto 99.2 8.8E-11 3E-15 117.4 15.5 153 36-191 31-217 (241)
301 2w1n_A O-GLCNACASE NAGJ; hexos 99.2 1.5E-10 5.2E-15 104.2 15.0 119 537-712 116-237 (238)
302 3s97_C Contactin-1; carbonic a 99.2 1.2E-10 4E-15 112.7 15.8 154 36-191 24-200 (201)
303 3v2a_R Vascular endothelial gr 99.2 7.2E-12 2.5E-16 149.4 8.7 148 36-191 240-418 (772)
304 3irg_A Titin; IG-like, titin, 99.2 2.2E-11 7.5E-16 102.4 9.1 88 102-191 3-98 (100)
305 2v5t_A NCAM2, N-CAM 2, neural 99.2 9.4E-11 3.2E-15 112.1 14.7 152 36-191 18-187 (189)
306 3rjd_A High affinity immunoglo 99.2 4.2E-10 1.4E-14 114.1 20.2 229 104-362 1-248 (262)
307 3jz7_A MCAR, CAR, coxsackievir 99.2 8.4E-11 2.9E-15 115.1 14.5 156 115-279 10-202 (214)
308 1waa_A Titin; metal binding pr 99.2 5E-11 1.7E-15 97.7 10.7 83 102-191 3-91 (93)
309 4fqp_A Poliovirus receptor; im 99.2 9.9E-11 3.4E-15 122.3 15.9 204 64-280 81-295 (313)
310 2c5d_C AXL oncogene, tyrosine- 99.2 1.3E-10 4.3E-15 111.9 15.4 148 36-191 18-192 (195)
311 4fa8_A Secreted protein BARF1; 99.2 1.1E-11 3.7E-16 119.2 7.7 110 69-184 76-194 (203)
312 3oq3_B IFN-alpha/beta binding 99.2 2.7E-10 9.2E-15 119.9 19.2 185 2-190 104-328 (329)
313 3o4o_C Interleukin-1 receptor 99.2 4.5E-11 1.5E-15 126.7 13.2 164 102-278 16-205 (339)
314 3sgj_C Human FCG3A receptor; r 99.2 3.8E-11 1.3E-15 116.0 11.5 164 102-289 5-172 (204)
315 2yuw_A Myosin binding protein 99.2 2.8E-11 9.6E-16 103.5 9.1 100 714-817 6-108 (110)
316 2bk8_A Connectin, M1, titin he 99.2 1.2E-10 4E-15 97.1 12.6 83 107-191 4-93 (97)
317 2yuw_A Myosin binding protein 99.2 8.2E-11 2.8E-15 100.6 11.9 98 480-580 6-107 (110)
318 1epf_A NCAM, protein (neural c 99.2 1.2E-10 4.1E-15 111.6 14.2 162 104-278 2-180 (191)
319 4fqp_A Poliovirus receptor; im 99.2 3E-10 1E-14 118.6 18.4 88 101-191 213-303 (313)
320 2rcj_C Light chain; immunoglob 99.2 1.8E-09 6.3E-14 121.8 26.1 235 36-279 130-410 (523)
321 1x5y_A Myosin binding protein 99.2 7E-11 2.4E-15 101.2 11.0 98 480-580 7-108 (111)
322 2ee3_A Collagen alpha-1(XX) ch 99.2 8.4E-11 2.9E-15 98.8 11.1 92 198-290 5-96 (108)
323 2kbg_A N-CAM 2, neural cell ad 99.2 5.3E-11 1.8E-15 100.4 9.7 94 719-817 11-105 (114)
324 3vh8_G Killer cell immunoglobu 99.2 2.2E-09 7.6E-14 112.1 24.0 233 36-288 39-310 (316)
325 1rhf_A Tyrosine-protein kinase 99.2 2E-10 6.9E-15 109.0 14.5 145 36-190 18-181 (182)
326 2edn_A Myosin-binding protein 99.2 4.7E-11 1.6E-15 101.1 8.7 88 103-191 11-115 (118)
327 1z7z_I Intercellular adhesion 99.2 2.6E-10 9.1E-15 126.0 17.2 248 3-277 63-351 (450)
328 2r15_A Myomesin-1; sarcomeric 99.2 2.3E-10 7.9E-15 111.7 14.9 86 104-191 117-209 (212)
329 3qt2_A Interleukin-5 receptor 99.2 1E-08 3.6E-13 104.8 27.6 216 445-709 70-313 (317)
330 2v9r_A Roundabout homolog 1; p 99.2 1.2E-10 4.1E-15 113.7 12.8 167 102-280 7-192 (212)
331 3o4o_C Interleukin-1 receptor 99.2 2E-11 6.7E-16 129.4 7.6 238 36-281 34-327 (339)
332 4fom_A Poliovirus receptor-rel 99.2 9.3E-11 3.2E-15 122.3 12.6 207 64-280 76-291 (308)
333 2cuh_A Tenascin-X; fibronectin 99.2 5E-11 1.7E-15 102.7 8.6 105 620-732 7-111 (115)
334 2cr3_A Basic fibroblast growth 99.2 4E-11 1.4E-15 100.2 7.8 75 115-191 13-89 (99)
335 3mj6_A Junctional adhesion mol 99.2 1.8E-10 6.1E-15 117.3 14.3 163 105-279 6-227 (268)
336 2kbg_A N-CAM 2, neural cell ad 99.2 6.3E-11 2.2E-15 100.0 8.8 95 620-716 8-104 (114)
337 2wng_A Tyrosine-protein phosph 99.2 1.3E-09 4.4E-14 114.6 20.9 166 105-279 4-206 (327)
338 1x5y_A Myosin binding protein 99.2 9.2E-11 3.1E-15 100.5 9.9 97 620-716 8-108 (111)
339 3ojm_B Fibroblast growth facto 99.2 2.8E-10 9.5E-15 112.9 15.0 162 35-206 34-228 (231)
340 2rb8_A Tenascin; beta sheet,lo 99.2 1.3E-10 4.4E-15 97.8 10.5 92 718-816 4-96 (104)
341 4dep_C Interleukin-1 receptor 99.2 1.1E-10 3.8E-15 124.2 12.7 158 115-276 17-200 (349)
342 2lvc_A Obscurin-like protein 1 99.2 8.8E-11 3E-15 95.5 9.1 82 103-190 3-91 (91)
343 2iep_A Muscle-specific kinase 99.2 1.4E-10 4.7E-15 111.3 12.2 149 36-191 23-189 (192)
344 1ujt_A KIAA1568 protein; fibro 99.2 2E-10 6.8E-15 98.4 11.7 72 647-718 41-119 (120)
345 1bpv_A Titin, A71, connectin; 99.2 9.6E-11 3.3E-15 99.6 9.6 94 480-576 9-106 (112)
346 3caf_A Fibroblast growth facto 99.2 6.9E-11 2.4E-15 99.2 8.7 87 103-190 3-99 (100)
347 2x1w_L Vascular endothelial gr 99.2 9.1E-11 3.1E-15 114.6 10.9 164 111-279 14-197 (213)
348 2cum_A Tenascin-X; hexabrachio 99.2 1.9E-10 6.7E-15 96.8 11.4 94 620-717 7-100 (105)
349 1x44_A Myosin-binding protein 99.2 1.2E-10 4.2E-15 98.1 10.1 82 103-191 6-95 (103)
350 1fnl_A Low affinity immunoglob 99.2 1.8E-10 6.3E-15 108.4 12.2 155 102-278 5-162 (175)
351 2cui_A Tenascin-X; fibronectin 99.2 1.4E-10 4.8E-15 98.0 10.1 97 714-817 7-111 (112)
352 4fom_A Poliovirus receptor-rel 99.2 8E-11 2.7E-15 122.8 10.6 146 39-191 133-299 (308)
353 2y23_A Myomesin; structural pr 99.2 7.2E-11 2.5E-15 123.4 10.2 237 36-279 17-302 (312)
354 1z7z_I Intercellular adhesion 99.2 2E-10 6.7E-15 127.1 14.2 166 104-280 85-273 (450)
355 2yd6_A PTPRD protein; hydrolas 99.1 5.5E-10 1.9E-14 109.0 15.7 154 36-191 22-203 (212)
356 2eny_A Obscurin; beta-sandwich 99.1 1.2E-10 4E-15 98.1 9.4 84 102-191 6-96 (104)
357 1bpv_A Titin, A71, connectin; 99.1 2.2E-11 7.4E-16 103.6 4.8 95 716-813 10-107 (112)
358 2va4_A NCAM2, N-CAM 2, neural 99.1 6.9E-10 2.4E-14 106.3 15.9 155 30-191 14-192 (192)
359 1gxe_A Myosin binding protein 99.1 7.2E-11 2.4E-15 104.6 8.1 80 111-191 25-138 (139)
360 2rb8_A Tenascin; beta sheet,lo 99.1 1.7E-10 6E-15 96.9 10.0 93 621-717 3-97 (104)
361 3r4d_A CEA-related cell adhesi 99.1 7E-10 2.4E-14 107.9 15.8 160 115-288 9-197 (208)
362 3b83_A Ten-D3; beta sheet, com 99.1 2.5E-10 8.4E-15 95.3 10.6 86 200-285 1-87 (100)
363 2v44_A NCAM2, neural cell adhe 99.1 1.3E-09 4.4E-14 104.1 17.2 148 36-191 18-186 (189)
364 2fbo_J V1V2;, variable region- 99.1 1.2E-10 4.2E-15 117.1 10.5 158 108-278 6-238 (250)
365 2cuh_A Tenascin-X; fibronectin 99.1 1.9E-10 6.4E-15 99.0 10.0 108 198-311 5-112 (115)
366 2edf_A Obscurin; beta-sandwich 99.1 1.4E-10 4.7E-15 97.9 8.9 83 102-191 6-94 (103)
367 3k2m_C Monobody HA4; engineere 99.1 3.5E-10 1.2E-14 94.4 11.3 80 620-700 4-85 (101)
368 3k2m_C Monobody HA4; engineere 99.1 3.6E-10 1.2E-14 94.4 11.3 78 719-800 7-85 (101)
369 3b5h_A Cervical EMMPRIN, HAB18 99.1 8.2E-10 2.8E-14 104.9 15.4 153 115-280 8-174 (184)
370 1hng_A CD2; T lymphocyte adhes 99.1 1.4E-10 4.7E-15 109.0 9.8 144 115-279 6-166 (176)
371 2cum_A Tenascin-X; hexabrachio 99.1 7.1E-10 2.4E-14 93.4 12.8 92 198-292 5-97 (105)
372 3u83_A Poliovirus receptor-rel 99.1 5.1E-10 1.7E-14 118.0 14.9 201 64-279 94-310 (331)
373 3k0w_A Mucosa-associated lymph 99.1 1.2E-09 4.2E-14 107.0 16.4 149 36-191 34-201 (218)
374 1wwc_A Protein (NT-3 growth fa 99.1 2.7E-10 9.1E-15 98.9 10.3 87 100-191 4-100 (118)
375 2dku_A KIAA1556 protein; beta- 99.1 2.7E-10 9.1E-15 96.1 10.0 90 102-205 6-101 (103)
376 3b83_A Ten-D3; beta sheet, com 99.1 2.7E-10 9.1E-15 95.1 9.7 82 718-805 3-85 (100)
377 1f2q_A High affinity immunoglo 99.1 3.4E-10 1.2E-14 106.7 11.7 153 102-277 2-158 (176)
378 3ejj_X Macrophage colony-stimu 99.1 6.7E-10 2.3E-14 114.5 14.9 153 36-191 105-280 (289)
379 3m45_A Cell adhesion molecule 99.1 2.8E-10 9.5E-15 97.1 9.8 88 102-191 4-105 (108)
380 3bfo_A Mucosa-associated lymph 99.1 4.6E-10 1.6E-14 92.0 10.7 81 104-191 3-86 (91)
381 2cui_A Tenascin-X; fibronectin 99.1 4.5E-10 1.5E-14 94.9 10.7 65 649-714 34-108 (112)
382 3qwq_B Adnectin; cell surface 99.1 1.9E-10 6.4E-15 98.1 8.3 96 715-817 3-107 (114)
383 1p6f_A NKP46, natural cytotoxi 99.1 3.3E-09 1.1E-13 105.1 18.6 174 102-290 5-190 (242)
384 3mjg_X Beta-type platelet-deri 99.1 1.1E-09 3.7E-14 112.9 15.7 148 36-191 111-277 (289)
385 2r15_A Myomesin-1; sarcomeric 99.1 9.3E-10 3.2E-14 107.4 14.4 156 118-279 15-200 (212)
386 1gl4_B Basement membrane-speci 99.1 7.2E-10 2.5E-14 92.4 11.6 86 104-191 9-97 (98)
387 1epf_A NCAM, protein (neural c 99.1 2E-09 6.8E-14 103.0 16.3 148 36-190 18-189 (191)
388 2ocf_D Fibronectin; estrogen r 99.1 1.9E-10 6.6E-15 99.3 8.2 93 710-808 22-116 (121)
389 3s97_C Contactin-1; carbonic a 99.1 3.4E-10 1.2E-14 109.4 10.9 161 110-279 14-191 (201)
390 2erj_C Cytokine receptor commo 99.1 3.9E-09 1.3E-13 104.1 18.4 186 481-715 36-235 (247)
391 2ifg_A High affinity nerve gro 99.1 7.3E-11 2.5E-15 125.1 6.5 165 102-279 156-335 (347)
392 3qht_C Monobody YSMB-1; fibron 99.1 4.6E-10 1.6E-14 93.0 10.0 83 199-281 3-86 (97)
393 2yuv_A Myosin-binding protein 99.1 8.2E-10 2.8E-14 92.4 11.6 84 102-191 5-94 (100)
394 2dlt_A Myosin binding protein 99.1 3.1E-10 1.1E-14 96.3 9.1 85 102-191 6-96 (106)
395 2edh_A Obscurin; structural ge 99.1 9.6E-10 3.3E-14 94.5 12.3 82 102-191 17-104 (113)
396 4hwu_A Fibroblast growth facto 99.1 3.4E-10 1.2E-14 93.8 8.9 77 111-191 8-86 (95)
397 2v9r_A Roundabout homolog 1; p 99.1 5.1E-10 1.8E-14 109.2 11.8 149 36-191 25-201 (212)
398 3qht_C Monobody YSMB-1; fibron 99.1 5.9E-10 2E-14 92.4 10.3 82 620-704 4-87 (97)
399 2dkm_A Collagen alpha-1(XX) ch 99.1 1.2E-09 4.2E-14 91.7 12.4 83 480-567 7-89 (104)
400 3mjg_X Beta-type platelet-deri 99.1 2.1E-09 7.1E-14 110.8 16.9 240 107-363 3-268 (289)
401 2lu7_A Obscurin-like protein 1 99.1 2.5E-10 8.5E-15 91.1 7.6 71 115-191 6-82 (84)
402 2ic2_A CG9211-PA, GH03927P; IH 99.1 9.9E-10 3.4E-14 93.9 11.7 84 480-568 4-100 (115)
403 2cry_A KIN of IRRE-like protei 99.1 5.2E-11 1.8E-15 104.2 3.8 89 100-191 10-112 (122)
404 2edk_A Myosin-binding protein 99.1 1.6E-10 5.5E-15 97.0 6.6 84 101-191 5-98 (101)
405 2k1m_A Myosin-binding protein 99.1 7.2E-10 2.5E-14 91.7 10.5 83 102-191 6-94 (95)
406 1nkr_A P58-CL42 KIR; inhibitor 99.1 5.8E-09 2E-13 100.5 18.5 157 102-275 6-183 (201)
407 3tes_A Tencon; fibronectin typ 99.1 5.4E-10 1.8E-14 92.6 9.6 82 620-704 1-84 (98)
408 2dkm_A Collagen alpha-1(XX) ch 99.1 1.1E-09 3.9E-14 92.0 11.7 89 716-812 8-97 (104)
409 2e6q_A Obscurin-like protein 1 99.1 1.5E-09 5.2E-14 91.3 12.4 83 102-191 6-104 (112)
410 2ifg_A High affinity nerve gro 99.1 1.7E-10 5.7E-15 122.4 8.1 145 35-191 173-344 (347)
411 3lcy_A Titin; A-BAND, IG tande 99.1 1.3E-09 4.3E-14 105.0 13.5 150 36-191 23-195 (197)
412 1j8k_A Fibronectin; EDA, TYPEI 99.1 7.1E-10 2.4E-14 91.4 10.0 88 621-712 2-91 (94)
413 2e6p_A Obscurin-like protein 1 99.1 3.2E-10 1.1E-14 95.9 8.1 90 102-204 5-102 (104)
414 2yux_A Myosin-binding protein 99.1 1.8E-10 6.2E-15 100.1 6.6 96 180-283 4-104 (120)
415 2dmk_A Midline 2 isoform 2; mi 99.1 1.8E-09 6.2E-14 94.6 13.1 95 480-577 14-117 (127)
416 2x1w_L Vascular endothelial gr 99.1 1.7E-09 5.9E-14 105.4 14.3 124 64-191 66-206 (213)
417 3jz7_A MCAR, CAR, coxsackievir 99.1 5.4E-10 1.8E-14 109.2 10.7 122 64-191 86-211 (214)
418 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.0 3.6E-09 1.2E-13 106.5 16.9 168 105-278 4-235 (256)
419 2cr6_A KIAA1556 protein, obscu 99.0 3.2E-10 1.1E-14 97.8 7.7 83 103-191 12-101 (115)
420 2ic2_A CG9211-PA, GH03927P; IH 99.0 1.5E-09 5.3E-14 92.7 11.9 85 725-811 11-110 (115)
421 3qwq_B Adnectin; cell surface 99.0 4.8E-10 1.6E-14 95.5 8.4 77 620-699 3-81 (114)
422 3qr2_A Basigin; CD147, EMMPRIN 99.0 1.1E-09 3.7E-14 98.0 11.1 82 99-182 16-116 (137)
423 2dmk_A Midline 2 isoform 2; mi 99.0 1.5E-09 5.2E-14 95.1 11.7 93 618-713 13-117 (127)
424 1qgc_4 Protein (immunoglobulin 99.0 1.1E-08 3.9E-13 112.4 21.7 199 69-277 82-321 (438)
425 3ry4_A Low affinity immunoglob 99.0 9.3E-10 3.2E-14 103.0 11.1 152 104-278 4-159 (170)
426 4f80_A Butyrophilin subfamily 99.0 1.3E-08 4.3E-13 100.4 19.7 158 112-279 11-203 (226)
427 2erj_C Cytokine receptor commo 99.0 1.1E-08 3.8E-13 100.8 18.9 186 581-818 38-238 (247)
428 2yux_A Myosin-binding protein 99.0 9E-10 3.1E-14 95.7 9.6 87 480-569 16-104 (120)
429 1jbj_A CD3 epsilon and gamma e 99.0 3.3E-10 1.1E-14 107.6 7.4 149 115-279 9-179 (186)
430 4dkd_C Macrophage colony-stimu 99.0 2.1E-09 7E-14 111.0 14.1 239 102-362 2-270 (292)
431 3esu_F Antibody 14B7* light ch 99.0 4.8E-09 1.6E-13 105.3 16.4 166 106-274 6-231 (250)
432 3mj8_L Stimulatory hamster ant 99.0 1.2E-09 3.9E-14 106.8 11.4 163 105-277 2-201 (213)
433 3u83_A Poliovirus receptor-rel 99.0 1.5E-09 5E-14 114.5 13.0 146 38-191 153-319 (331)
434 2wng_A Tyrosine-protein phosph 99.0 5.4E-09 1.9E-13 109.8 17.3 229 36-279 19-309 (327)
435 3so5_A LIG-3, leucine-rich rep 99.0 1.2E-09 4.1E-14 93.9 10.0 87 102-190 8-111 (112)
436 2v9t_A Roundabout homolog 1; s 99.0 6.1E-10 2.1E-14 96.5 8.2 89 101-191 6-108 (117)
437 2dle_A Receptor-type tyrosine- 99.0 1.7E-09 5.7E-14 89.9 10.3 95 715-819 7-102 (104)
438 3r4d_A CEA-related cell adhesi 99.0 4E-09 1.4E-13 102.5 14.9 149 36-191 15-199 (208)
439 2fbo_J V1V2;, variable region- 99.0 2.7E-09 9.2E-14 107.2 14.0 123 64-189 92-249 (250)
440 3b5h_A Cervical EMMPRIN, HAB18 99.0 9.9E-09 3.4E-13 97.3 17.2 147 36-191 14-182 (184)
441 2ny1_B T-cell surface glycopro 99.0 3.7E-09 1.3E-13 100.3 14.1 70 115-191 107-178 (184)
442 1pd6_A Cardiac MYBP-C;, myosin 99.0 8.3E-10 2.9E-14 92.7 8.2 85 101-191 12-103 (104)
443 1f97_A Junction adhesion molec 99.0 2.2E-09 7.5E-14 104.7 12.4 149 36-191 17-206 (212)
444 1j8k_A Fibronectin; EDA, TYPEI 99.0 1.1E-09 3.8E-14 90.3 8.7 82 202-283 3-85 (94)
445 2e7b_A Obscurin; IG-like domai 99.0 8.4E-10 2.9E-14 93.0 8.1 83 102-191 6-94 (103)
446 2ekj_A Collagen alpha-1(XX) ch 99.0 5.8E-11 2E-15 100.2 0.8 92 719-817 10-103 (105)
447 2y23_A Myomesin; structural pr 99.0 7E-09 2.4E-13 108.2 16.7 238 115-362 11-301 (312)
448 2ny1_B T-cell surface glycopro 99.0 1.3E-09 4.5E-14 103.5 10.0 143 115-279 5-169 (184)
449 3teu_A Fibcon; FN3 domain, fib 99.0 3.5E-09 1.2E-13 88.0 11.4 81 201-281 2-83 (98)
450 3teu_A Fibcon; FN3 domain, fib 99.0 1.9E-09 6.5E-14 89.7 9.6 80 719-804 4-84 (98)
451 1k85_A Chitinase A1; fibronect 99.0 6.5E-09 2.2E-13 84.3 12.5 85 481-575 3-88 (88)
452 2oz4_A Intercellular adhesion 99.0 1.8E-09 6.1E-14 109.5 11.3 150 103-278 5-168 (265)
453 3tes_A Tencon; fibronectin typ 99.0 2E-09 6.7E-14 89.1 9.4 80 202-281 3-83 (98)
454 2p1y_A Bispecific alpha/beta T 99.0 1.3E-08 4.3E-13 101.3 17.2 164 107-276 3-222 (238)
455 1qgc_4 Protein (immunoglobulin 99.0 3.8E-09 1.3E-13 116.3 14.6 161 109-278 223-428 (438)
456 2qbw_A PDZ-fibronectin fusion 99.0 6.1E-09 2.1E-13 99.3 14.0 88 718-811 105-193 (195)
457 1hnf_A CD2; T lymphocyte adhes 99.0 6.9E-09 2.4E-13 97.4 14.1 144 115-279 9-171 (182)
458 2vr9_A Roundabout 1, ROBO; imm 99.0 3.1E-09 1E-13 104.1 12.2 149 36-191 25-205 (217)
459 1igt_B IGG2A intact antibody - 99.0 5.7E-09 2E-13 114.9 15.7 84 103-188 237-337 (444)
460 3sgj_C Human FCG3A receptor; r 99.0 6.9E-09 2.3E-13 100.1 14.4 142 36-191 23-173 (204)
461 2dle_A Receptor-type tyrosine- 99.0 3.3E-09 1.1E-13 88.1 10.3 91 620-714 7-97 (104)
462 4fmk_A Poliovirus receptor-rel 99.0 1.2E-08 4E-13 100.5 16.3 156 115-279 11-207 (225)
463 3rbg_A Cytotoxic and regulator 99.0 1.9E-09 6.4E-14 94.3 9.3 81 109-191 6-100 (124)
464 2ens_A Advanced glycosylation 99.0 4.3E-10 1.5E-14 93.3 4.9 83 102-191 8-92 (96)
465 2znx_A SCFV; fluorotryptohpan, 99.0 8.9E-09 3E-13 102.6 15.3 84 107-191 4-107 (242)
466 3uzq_A Anti-dengue MAB 4E11; d 99.0 5.7E-09 1.9E-13 104.9 13.9 167 108-277 5-231 (253)
467 2dm7_A KIAA1556 protein; beta- 99.0 3.5E-09 1.2E-13 90.1 10.5 83 101-191 5-93 (108)
468 1gsm_A Madcam-1, mucosal addre 98.9 8.8E-09 3E-13 97.6 14.2 74 115-191 17-94 (210)
469 1k85_A Chitinase A1; fibronect 98.9 7E-09 2.4E-13 84.0 11.8 85 620-711 3-88 (88)
470 3sbw_C Programmed cell death 1 98.9 5.2E-09 1.8E-13 102.9 13.2 155 115-280 11-202 (222)
471 2oz4_A Intercellular adhesion 98.9 3.4E-09 1.2E-13 107.5 11.9 214 36-279 19-254 (265)
472 3s35_X Vascular endothelial gr 98.9 2.8E-09 9.4E-14 93.2 9.6 76 115-191 18-109 (122)
473 1nbq_A JAM, junctional adhesio 98.9 2.5E-09 8.7E-14 103.9 10.3 144 36-186 20-201 (209)
474 3auv_A SC-DSFV derived from th 98.9 1.1E-08 3.8E-13 104.2 15.4 170 104-276 12-236 (276)
475 1ccz_A Protein (CD58); LFA-3, 98.9 2.6E-09 9E-14 99.5 9.6 142 115-279 5-161 (171)
476 1hng_A CD2; T lymphocyte adhes 98.9 5.6E-09 1.9E-13 97.9 11.9 111 61-190 60-174 (176)
477 2b5i_C Cytokine receptor commo 98.9 4.4E-08 1.5E-12 93.6 18.3 178 625-813 3-195 (199)
478 2ekj_A Collagen alpha-1(XX) ch 98.9 5.4E-10 1.8E-14 94.2 4.3 88 198-285 5-93 (105)
479 4frw_A Poliovirus receptor-rel 98.9 1.1E-08 3.7E-13 100.1 14.4 155 115-279 9-201 (218)
480 2ocf_D Fibronectin; estrogen r 98.9 2.5E-09 8.6E-14 92.3 8.5 84 199-282 27-111 (121)
481 1svz_A Immunoglobulin;, single 98.9 1.1E-08 3.8E-13 102.4 14.6 165 107-275 4-228 (247)
482 2b5i_C Cytokine receptor commo 98.9 2.9E-08 9.8E-13 95.0 16.7 177 487-712 4-194 (199)
483 1b6u_A KIR2DL3, P58 killer cel 98.9 3E-08 1E-12 98.9 17.3 172 102-290 5-200 (257)
484 1uc6_A CNTF receptor, ciliary 98.9 6.7E-09 2.3E-13 88.1 10.5 89 480-572 6-99 (109)
485 2ghw_B Anti-SARS SCFV antibody 98.9 3.1E-08 1.1E-12 99.1 17.3 158 115-276 12-228 (247)
486 2qbw_A PDZ-fibronectin fusion 98.9 3E-08 1E-12 94.5 16.3 90 482-575 104-193 (195)
487 1lk3_L 9D7 light chain; antige 98.9 3.9E-09 1.3E-13 102.7 10.3 161 107-277 4-200 (210)
488 4i0k_A CD276 antigen; immunogl 98.9 2E-08 6.7E-13 98.7 15.4 123 64-191 74-205 (222)
489 3d9a_L Light chain of hyhel10 98.9 3.4E-09 1.2E-13 103.4 9.6 162 107-277 4-201 (213)
490 2b5i_B Interleukin-2 receptor 98.9 7.2E-09 2.5E-13 99.8 11.4 100 718-817 107-211 (214)
491 3ux9_B SCFV antibody; five hel 98.9 1.9E-08 6.5E-13 101.3 15.0 77 115-191 12-112 (256)
492 2gi7_A GPVI protein; IG-like d 98.9 8.6E-09 3E-13 97.7 11.4 138 36-180 23-168 (184)
493 3up1_A Interleukin-7 receptor 98.9 9.8E-08 3.4E-12 91.0 18.3 172 633-816 35-217 (223)
494 1hzh_H IGG, immunoglobulin hea 98.9 2.7E-08 9.3E-13 109.9 16.8 149 35-185 147-343 (457)
495 3nl4_L Antigen binding fragmen 98.9 6.5E-09 2.2E-13 101.4 10.5 158 105-273 2-198 (213)
496 1dr9_A B7-1 (CD80), T lymphocy 98.9 8.1E-09 2.8E-13 99.6 11.0 154 115-278 4-190 (201)
497 2gjj_A A21 single-chain antibo 98.9 3.4E-08 1.1E-12 99.7 15.9 87 104-191 5-117 (264)
498 3mtr_A N-CAM-1, NCAM-1, neural 98.9 7.6E-08 2.6E-12 93.8 17.9 134 674-813 75-211 (215)
499 1z9m_A GAPA225; nectin-like, I 98.9 9.9E-09 3.4E-13 92.6 10.6 88 107-204 41-143 (145)
500 3juy_B 3B3 single chain varian 98.9 4.9E-08 1.7E-12 98.2 16.9 170 103-276 5-243 (256)
No 1
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=100.00 E-value=3.2e-49 Score=456.42 Aligned_cols=548 Identities=19% Similarity=0.238 Sum_probs=395.8
Q ss_pred CCCCceEEecCCCeEEEEEEc-------cCCCCeEEEeeCCccccCCCCcee--ecceEEEEeee-cCCeEEEEEEEec-
Q psy8771 110 PPPALLEVMLDSPLNLSCVAV-------GSPMPFVKWRKGQNIELTPDDKLP--VGRNVLTLDRV-TESENYTCIAASV- 178 (904)
Q Consensus 110 ~~~~~~~~~~g~~~~l~C~~~-------g~p~p~i~W~k~~~~~~~~~~~~~--~~~~~l~i~~l-~d~g~Y~c~a~n~- 178 (904)
-|.+ .++..|++++|.|.+. |.|.+.|.|+++ +..+....... .....|.|.++ ...+.|.|.+...
T Consensus 9 ~p~~-~~v~~G~~v~l~C~~~~~~~~~~~~~~~~i~W~~~-~~~i~~~~~~~~~~~~~~l~i~~~~~~~~~y~C~~~~~~ 86 (589)
T 3l5h_A 9 SPES-PVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTN-HFTIPKEQYTIINRTASSVTFTDIASLNIQLTCNILTFG 86 (589)
T ss_dssp SCSC-CCCCSSSCCCCCC-CCTTTTTTTTCCTTTCCCBCS-SSBSCGGGCBCCSSSCCBCCCCCCCSSCCCCCCC-CCTT
T ss_pred ecCC-CEEeCCCCEEEEEEEeCccCccccccccceEEEeC-CEECChHHccccCCcEeEEEEecCCCcceeeEEecccCC
Confidence 3456 7789999999999998 677889999999 66564432111 23557899999 3456688988642
Q ss_pred -CcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC--CccceEEEEEEEeCCCCCCeEEeecceeceE
Q psy8771 179 -LGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP--SETLLYYVIQYKPKAANTPYSEISGIITTYY 255 (904)
Q Consensus 179 -~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~ 255 (904)
.+.....+.|.+. .+|.+|.+|++...+..+++|+|+++ ......|.|.++..+...............+
T Consensus 87 ~~~~~~~~~~l~v~-------~pP~~P~nl~c~~~~~~~~~~~W~~~~~~~~~~~y~l~~~~~~~~~~~c~~~~~~~~~c 159 (589)
T 3l5h_A 87 QLEQNVYGITIISG-------LPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPTSC 159 (589)
T ss_dssp CC-CCCCCCCCCC--------CCCCCCEEEEEEEETTSCEEEEEECCSCCSSCEEEEECCBCSSSBCCCEECBTTBSSCC
T ss_pred CcccEEEeEEEecc-------CCCCCCEeeEEEECCCceEEEEECCCCcCCcCceEEEEEEEcCCCcccCCCCCCCcEEE
Confidence 1223345556666 78999999999999999999999997 4457899999875432222222222334667
Q ss_pred EEc-CCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEe--cccCCCeeEEEecCCCCCCceeeEEEEEe
Q psy8771 256 TVR-NLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQV--RPLSSSTMVIQWDEPETPNGQITAKHHRR 332 (904)
Q Consensus 256 ~i~-~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~--~~~~~~~v~l~W~~p~~~~~~~~~~~~~~ 332 (904)
.+. +|.+++.|.|+|.|.|..|.+. +....+......++.+|.++.+ .....+++.|+|++|...++.+.
T Consensus 160 ~~~~~l~~~~~Y~~~v~a~n~~G~~~-s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~------ 232 (589)
T 3l5h_A 160 TVDYSTVYFVNIEVWVEAENALGKVT-SDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIIL------ 232 (589)
T ss_dssp BCCSCCCSSSCEEECEEEEESSCCBC-CCCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCE------
T ss_pred EECCCCchheeEEEEEEEEeCCCCcc-cccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeE------
Confidence 777 8999999999999999999864 4455565555556789999998 56788999999998876544332
Q ss_pred eceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcEEEE
Q psy8771 333 IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYI 412 (904)
Q Consensus 333 ~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 412 (904)
.|.++.+...... +.. .
T Consensus 233 ----------------~Y~v~~~~~~~~~---w~~----------------------~---------------------- 249 (589)
T 3l5h_A 233 ----------------KYNIQYRTKDAST---WSQ----------------------I---------------------- 249 (589)
T ss_dssp ----------------EEEEEEEETTCSC---CBC----------------------C----------------------
T ss_pred ----------------EEEEEECCCCCCC---cEE----------------------E----------------------
Confidence 3555444321100 000 0
Q ss_pred EEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCC---CCCceeeecCCCCCCCCCCeE
Q psy8771 413 WLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGAT---TPPIPVRTKQYEPGTAPRDVQ 489 (904)
Q Consensus 413 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~---s~~~~~~t~~~~p~~~p~~l~ 489 (904)
. .....+....+.+.+|.|++.|.|+|+|.+..|.+.+ |....+.|....|..+|..+.
T Consensus 250 ---------------~---~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~ 311 (589)
T 3l5h_A 250 ---------------P---PEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWY 311 (589)
T ss_dssp ---------------C---TTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEE
T ss_pred ---------------c---cccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEE
Confidence 0 0000123456789999999999999999999987655 566777888777767787665
Q ss_pred EE----ecCCceEEEEecC--CCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCC
Q psy8771 490 VR----PLSSSTMVIQWDE--PETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVG 563 (904)
Q Consensus 490 v~----~~~~~~~~l~W~~--p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g 563 (904)
.. ..+.+++.|+|++ +.+.+|.+.+|.|+|+..... +.. .......+. .|.+++.|.|+|+|.|..|
T Consensus 312 ~v~~~~~~~~~~v~l~W~p~~~~~~~g~i~~Y~v~~~~~~~~----~~~-~~~~~~~~~--~l~~~~~Y~~~V~A~n~~G 384 (589)
T 3l5h_A 312 KIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSH----LQN-YTVNATKLT--VNLTNDRYLATLTVRNLVG 384 (589)
T ss_dssp ECCSCSSTTSCCEEEEECCCCTTTSSSCCCEEEEEECCTTSC----CCB-CCCSSSCCE--ECCCSSCCCEEEEEEBTTB
T ss_pred EeecCcCCCcceEEEEEeeCCchhccCceeeEEEEEecCCCC----cee-eccCCceEE--EEeCCCCEEEEEEEEeCCc
Confidence 43 4567899999997 455678999999999776532 211 112233333 3889999999999999999
Q ss_pred CCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccC
Q psy8771 564 PGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSK 643 (904)
Q Consensus 564 ~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~ 643 (904)
.|+.+...........|.++.++.+... .+++.|+|.++..
T Consensus 385 ~~~~s~~~~~~~~~~~~~p~~~l~~~~~-~~si~l~W~~p~~-------------------------------------- 425 (589)
T 3l5h_A 385 KSDAAVLTIPACDFQATHPVMDLKAFPK-DNMLWVEWTTPRE-------------------------------------- 425 (589)
T ss_dssp CCCCCCCCCCCTTCCCCSCCCSCEEEEC-SSSEEEECCCCSS--------------------------------------
T ss_pred cCCCeEEEeecccccCCCCcceEEEEEC-CCeEEEEEECCCC--------------------------------------
Confidence 9987754322221123455678887765 6789999988742
Q ss_pred CCCCCCceeeEEEEEEeCCcccc-----ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCC
Q psy8771 644 PTHSGENIISYELYWNDTYAKAK-----HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGA 718 (904)
Q Consensus 644 ~~~~~~~~~~y~v~~~~~~~~~~-----~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~ 718 (904)
.+.+|.|+|+..+.... ..........+.+.+|.|++.|.|+|+|++..|.|..+ .+.+.|.+.+|..
T Consensus 426 ------~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~-~~~~~t~~~~P~~ 498 (589)
T 3l5h_A 426 ------SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPE-SIKAYLKQAPPSK 498 (589)
T ss_dssp ------CCSCBCCEEEEECSSSCCCEEECCBCSSCCEEECCSCCCSSSEEEEEECBEETTEECCCE-EEEEESSCCCCSS
T ss_pred ------CccEEEEEEEECCCCCCCccCcEEeeCCcceEEehhccccCcEEEEEEEEEeCCcccCCE-EEEEEeccCCCCC
Confidence 57888888887765322 11222233467779999999999999999999988765 5677888888886
Q ss_pred CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS 797 (904)
Q Consensus 719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~ 797 (904)
+| ++.+...+.+++.|+|++++.+..+|.+.+|.|+|+..++..+ ...+. ..+.++|.+|.|++.|.|+|+|.|.
T Consensus 499 pp-~l~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~~---~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~ 574 (589)
T 3l5h_A 499 GP-TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNET---AVNVDSSHTEYTLSSLTSDTLYMVRMAAYTD 574 (589)
T ss_dssp CC-CCCEECCCSSCBEEBCCCCCHHHHCSCEEEEEECCBCSSCCCC---CEEECTTCCBCCBCSCCSSCCEECCEEEEET
T ss_pred CC-eEEEeecccceEEEEecCCCHHHcCccceeEEEEEEeCCCCeE---EEEeCCcccEEEecCCCCCCEEEEEEEEEeC
Confidence 55 6899999999999999997546778999999999988765433 23344 8889999999999999999999999
Q ss_pred CCCCCCCCcEEeecC
Q psy8771 798 IGDGPSSYPITIRTH 812 (904)
Q Consensus 798 ~g~g~~s~~~~~~t~ 812 (904)
.| |..|..+.++|.
T Consensus 575 ~G-~~~S~~~~~~T~ 588 (589)
T 3l5h_A 575 EG-GKDGPEFTFTTP 588 (589)
T ss_dssp TE-EEECCCCEECCC
T ss_pred CC-CCCCCCeEEecC
Confidence 99 889999999885
No 2
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=3.9e-45 Score=431.42 Aligned_cols=558 Identities=17% Similarity=0.252 Sum_probs=335.0
Q ss_pred cceEEEEecC-CCCCcceeeEe----eC---CCCCCCCcEEEeccCCceEEEEeCCCCCCCc-----eecccccccccce
Q psy8771 10 PEEVFIILCP-LPPLIPGYILV----TE---PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-----ITHPPTRAARSHA 76 (904)
Q Consensus 10 ~~~~~~~~~~-~~p~~~~~~~~----~~---p~~~p~~l~~~~~~~~s~~v~W~~~~~~~g~-----i~~~~~~~~~~~~ 76 (904)
+.+.++++.+ +.+.-..|+.+ -. .......|.|+.-+.+..+|.|.+....... +....+...++..
T Consensus 58 ~~~~a~l~sp~~~~~~~~c~~F~y~m~G~~~~~~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~~~~~i~~~~~~~~~l 137 (731)
T 2v5y_A 58 EGQRAHLLLPQLKENDTHCIDFHYFVSSKSNSPPGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQV 137 (731)
T ss_dssp TTCEEEEEEEEECCSSCCEEEEEEEEECSSSSCSEEEEEEEEETTCCCCSEEEEECCCCCSSCEEEEEEECCCTTSCEEE
T ss_pred CCCEEEEEeCccCCCCCcEEEEEEEecCCCCCCcceEEEEEecCCCCccceeEEEeCCcCCceeEEEEEEeecCCCceEE
Confidence 4567777776 33333445442 11 1112334444555677889999987655332 1111111223333
Q ss_pred EEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEE-Ee--eCCccccCCCCce
Q psy8771 77 RLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVK-WR--KGQNIELTPDDKL 153 (904)
Q Consensus 77 ~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~-W~--k~~~~~~~~~~~~ 153 (904)
...++.....|......+.+.......+|.|. .+.+ +.+.+|++++|.|.+.|.|.|.|. |+ ++ +..+....+.
T Consensus 138 ~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~-~~~~-~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~-g~~l~~~~~~ 214 (731)
T 2v5y_A 138 IFEVITSGHQGYLAIDEVKVLGHPCTRTPHFL-RIQN-VEVNAGQFATFQCSAIGRTVAGDRLWLQGID-VRDAPLKEIK 214 (731)
T ss_dssp EEEEEECSSCCEEEECCBEEESSCCSSSCEEC-CCCC-EEEETTSCEEEEEEEESCCCTTCEEEEEESS-SCCEEEEEEE
T ss_pred EEEEEecCCceEEEEeeEEeeecccccccccc-cccc-eEEeCCCcEEEEEEeCCCCCCceeEEEecCC-CccccccceE
Confidence 44445566777666554444444556889988 4556 999999999999999999999998 88 56 5555332222
Q ss_pred ee----cceEEEEeee--cCCeEEEEEEEecCcc-eEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC--
Q psy8771 154 PV----GRNVLTLDRV--TESENYTCIAASVLGV-IETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP-- 224 (904)
Q Consensus 154 ~~----~~~~l~i~~l--~d~g~Y~c~a~n~~g~-~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~-- 224 (904)
.+ ..++|.|.+| .|.|.|+|.|.|..|. .+..+.|.|. .+|.+|..+.+...+.+++.|+|..+
T Consensus 215 ~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~-------~~P~~~~~p~~~~~~~~~v~l~w~~~~~ 287 (731)
T 2v5y_A 215 VTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVK-------EPPVPIAPPQLASVGATYLWIQLNANSI 287 (731)
T ss_dssp ECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEE-------CCCCBSSCCEEEEECSSCEEEECCCSSB
T ss_pred EeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEe-------cCCCCCCCcceeccCCceEEEEeCCccc
Confidence 22 2468999999 6999999999999998 7778889998 78888888888888999999999976
Q ss_pred --CccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEE--cCCCCCCCCCCeEEecCCCCCCCCCCc
Q psy8771 225 --SETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAV--NNLGRGPPSSPAVITTGETEPGTAPRD 300 (904)
Q Consensus 225 --~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~--n~~g~s~~s~~~~~~t~~~~p~~~p~~ 300 (904)
+.++.+|.|+|+.. ...|..+.......++|.+|.|++.|.|+|.|. |..|.+.++....+.+.+.
T Consensus 288 ~g~~~i~~Y~v~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~t~~~-------- 357 (731)
T 2v5y_A 288 NGDGPIVAREVEYCTA--SGSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTRTKCA-------- 357 (731)
T ss_dssp SSCSCCCEEEEEEEES--SSSCEEEEECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEECCCC--------
T ss_pred CCCCccEEEEEEEEEC--CCCceEEeccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEeeecCC--------
Confidence 36799999999986 334555444455889999999999999999999 9998877665444433221
Q ss_pred eEecccCCCeeEEEecCCCCCCceeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCC
Q psy8771 301 VQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTP 380 (904)
Q Consensus 301 l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~ 380 (904)
T Consensus 358 -------------------------------------------------------------------------------- 357 (731)
T 2v5y_A 358 -------------------------------------------------------------------------------- 357 (731)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcccccccccceeeeEEEEeccccCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEe
Q psy8771 381 GFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQ 460 (904)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~ 460 (904)
T Consensus 358 -------------------------------------------------------------------------------- 357 (731)
T 2v5y_A 358 -------------------------------------------------------------------------------- 357 (731)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCC--CCceeeEEEEEEeCCCCCCcceEE---Eee
Q psy8771 461 SPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETP--NGQITGYKVYYTQDQSLPMSAWET---QVV 535 (904)
Q Consensus 461 ~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~--~~~i~~Y~v~~~~~~~~~~~~~~~---~~~ 535 (904)
.|+.+|.++.+...+.+++.|+|++|... ++.+.+|.|+|+.........|.. ...
T Consensus 358 -------------------~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~ 418 (731)
T 2v5y_A 358 -------------------DPMRGPRKLEVVEVKSRQITIRWEPFGYNVTRCHSYNLTVHYCYQVGGQEQVREEVSWDTE 418 (731)
T ss_dssp -------------------CCSCCCEEEEEEEECSSCEEEEEECCCHHHHCSSSCEEEEEEEEESSSSEEEEEEEECCSS
T ss_pred -------------------CCCCCCceeEEEeccCCeEEEEEECCCcccccceeeeEEEEEEEccCCCCccceeEEEEec
Confidence 34567778888888888888888886432 346778999998765322222222 222
Q ss_pred cCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCC--CceEEecCCCeEEEEEeCCCCCCCCceEE
Q psy8771 536 DNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPR--DLRAVDIQETAVTLAWSKPTHSGENIISY 613 (904)
Q Consensus 536 ~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~--~~~~~~~~~~~~~l~W~~~~~~~~~~~~y 613 (904)
.....+.+.+|.|++.|.|+|+|+|..|.|. |..+.+.|....|.+|. .+.... ..+++.|+|.+|..
T Consensus 419 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~~P~~p~~~~~~~~~-~~~si~l~W~~P~~-------- 488 (731)
T 2v5y_A 419 NSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDEDLPGAVPTESIQGST-FEEKIFLQWREPTQ-------- 488 (731)
T ss_dssp CSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCCCCCCCCCTTTCEEEE-ETTEEEEECCCCSC--------
T ss_pred CCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccCCCCCCCCcceEEeee-cCCeEEEEEcCCCC--------
Confidence 5567899999999999999999999999984 88899999988887665 444443 46789999998875
Q ss_pred EEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc---------cceEEecccceEEEeCCCC
Q psy8771 614 ELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA---------KHHRRIGLVETYSLTGLYP 684 (904)
Q Consensus 614 ~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~---------~~~~~~~~~~~~~l~~L~p 684 (904)
.++.+.+|.|+|+...... .........++++|.+|+|
T Consensus 489 ---------------------------------~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p 535 (731)
T 2v5y_A 489 ---------------------------------TYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYP 535 (731)
T ss_dssp ---------------------------------CSSCCCEEEEEEEEEEECC---CCCCCEEEEEEETTCCEEEECSCCT
T ss_pred ---------------------------------CCCCccceEEEEEECcCCCccccccCcceEEeecCCcceEEecCCCC
Confidence 4556777777776654321 1223345567999999999
Q ss_pred CcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcE-EEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC
Q psy8771 685 NTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVS-CEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD 763 (904)
Q Consensus 685 ~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~-~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~ 763 (904)
++.|.|+|+|+|..|.|.++ .+.++|...+|..|+.... ....+.+++.|+|.+| ...+|+|.+|.|+|+......
T Consensus 536 ~t~Y~~~V~A~n~~G~g~~s-~~~~~T~~~~P~~p~~~~~~~~~~~~~si~l~W~pp--~~~~g~I~~Y~v~~~~~~~~~ 612 (731)
T 2v5y_A 536 GTTYSFTIRASTAKGFGPPA-TNQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPA--HSRGAPVSVYQIVVEEERPRR 612 (731)
T ss_dssp TEEEEEEEEEEETTEEEEEE-EEEEECCCCCCCC----------------------------------------------
T ss_pred CCEEEEEEEEEeCCccCCCc-ccEEEcCCCCCCCCCcccccccccCCceEEEEEeCC--CCCCCceEEEEEEEEecCCCC
Confidence 99999999999999999888 5888999888886544332 2456788999999988 568899999999998765321
Q ss_pred Ccc-----EE---------------------------------EEec---CcceEEecCCCCCceEEEEEEEeeCCCCCC
Q psy8771 764 SEA-----SI---------------------------------VTLK---NQTSFVLDELKKWTEYRIWVLAGTSIGDGP 802 (904)
Q Consensus 764 ~~~-----~~---------------------------------~~~~---~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~ 802 (904)
... .+ +.+. ....+....|+|++.|.|+|+|.+..|.|.
T Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aa~~~p~~~~~~~~~~vg~~~~~~~~~n~~L~p~~~Y~i~v~A~s~~g~~~ 692 (731)
T 2v5y_A 613 TKKTTEILKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGET 692 (731)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccccccccCcccccCHHHHhhcCCcceEEEEcChhhCcccCCEEECCCCeECCEECCCCCCCCceEEEEEEEEecCCCc
Confidence 000 00 0111 112233455999999999999999999999
Q ss_pred CCCcEEeecC
Q psy8771 803 SSYPITIRTH 812 (904)
Q Consensus 803 ~s~~~~~~t~ 812 (904)
.+..+.+.|.
T Consensus 693 ~~~~v~~~t~ 702 (731)
T 2v5y_A 693 KIDCVQVATK 702 (731)
T ss_dssp ----------
T ss_pred EeeeEEEecc
Confidence 9988888887
No 3
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=100.00 E-value=3.4e-39 Score=380.71 Aligned_cols=359 Identities=20% Similarity=0.269 Sum_probs=224.8
Q ss_pred eEEEecCCceEEEEecCCCCC-CCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE--eCCCC
Q psy8771 488 VQVRPLSSSTMVIQWDEPETP-NGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF--TSVGP 564 (904)
Q Consensus 488 l~v~~~~~~~~~l~W~~p~~~-~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~--~~~g~ 564 (904)
+.+...+.+++.|+|.++... ++.+.+|.|+|+... ..|..........+.+.+|.|++.|.|+|+|. |..|.
T Consensus 268 p~~~~~~~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~~----~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~ 343 (731)
T 2v5y_A 268 PQLASVGATYLWIQLNANSINGDGPIVAREVEYCTAS----GSWNDRQPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGT 343 (731)
T ss_dssp CEEEEECSSCEEEECCCSSBSSCSCCCEEEEEEEESS----SSCEEEEECCSSEEEECSCCTTCEEEEEEEEECSSTTCS
T ss_pred cceeccCCceEEEEeCCcccCCCCccEEEEEEEEECC----CCceEEeccCcceEEEeCCCCCCEEEEEEEEEecCCCcc
Confidence 344455778999999986543 368999999999864 45666666667889999999999999999999 99999
Q ss_pred CCCCCcEEEecCCCCC-CCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccC
Q psy8771 565 GPLSAPVLVKTQQGVP-SQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSK 643 (904)
Q Consensus 565 ~~~S~~~~~~t~~~~p-~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~ 643 (904)
+.+|....+.+....| .+|.++.+...+.+++.|+|.++...+
T Consensus 344 s~~S~~~~~~t~~~~p~~~P~~~~~~~~~~~sv~l~W~~p~~~~------------------------------------ 387 (731)
T 2v5y_A 344 GSPGPALRTRTKCADPMRGPRKLEVVEVKSRQITIRWEPFGYNV------------------------------------ 387 (731)
T ss_dssp CCBCCCEEEECCCCCCSCCCEEEEEEEECSSCEEEEEECCCHHH------------------------------------
T ss_pred ccCCCcEEeeecCCCCCCCCceeEEEeccCCeEEEEEECCCccc------------------------------------
Confidence 9999988888877666 688999999999999999999984310
Q ss_pred CCCCCCceeeEEEEEEeCCccccce------EEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC
Q psy8771 644 PTHSGENIISYELYWNDTYAKAKHH------RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG 717 (904)
Q Consensus 644 ~~~~~~~~~~y~v~~~~~~~~~~~~------~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~ 717 (904)
.++.+.+|.|+|+......+.. ........+.|.+|.|++.|.|+|+|+|..|.|. |..+.++|...+|.
T Consensus 388 ---~~~~~~~y~v~y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~-S~~~~~~T~~~~P~ 463 (731)
T 2v5y_A 388 ---TRCHSYNLTVHYCYQVGGQEQVREEVSWDTENSHPQHTITNLSPYTNVSVKLILMNPEGRKE-SQELIVQTDEDLPG 463 (731)
T ss_dssp ---HCSSSCEEEEEEEEESSSSEEEEEEEECCSSCSSCEEEECSCCSSCEEEEEEEEECSSCEEE-CCCEEEECCCCCCC
T ss_pred ---ccceeeeEEEEEEEccCCCCccceeEEEEecCCcceEEECCCCCCCEEEEEEEEEcCCCCCC-CceEEEEccCCCCC
Confidence 1345778999888765432211 1123457899999999999999999999999984 88899999999888
Q ss_pred CCC-CCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCC------ccEEEEec-CcceEEecCCCCCceEE
Q psy8771 718 APP-QNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDS------EASIVTLK-NQTSFVLDELKKWTEYR 789 (904)
Q Consensus 718 ~~P-~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~------~~~~~~~~-~~~~~~i~~L~p~t~Y~ 789 (904)
.+| ..+.+.. ..+++.|+|++| ...||.+.+|.|+|+..+.... ........ ..+.++|.+|+|++.|.
T Consensus 464 ~p~~~~~~~~~-~~~si~l~W~~P--~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 540 (731)
T 2v5y_A 464 AVPTESIQGST-FEEKIFLQWREP--TQTYGVITLYEITYKAVSSFDPEIDLSNQSGRVSKLGNETHFLFFGLYPGTTYS 540 (731)
T ss_dssp CCCTTTCEEEE-ETTEEEEECCCC--SCCSSCCCEEEEEEEEEEECC---CCCCCEEEEEEETTCCEEEECSCCTTEEEE
T ss_pred CCCcceEEeee-cCCeEEEEEcCC--CCCCCCccceEEEEEECcCCCccccccCcceEEeecCCcceEEecCCCCCCEEE
Confidence 765 4666654 478999999998 4678999999999998754211 11222333 78899999999999999
Q ss_pred EEEEEeeCCCCCCCCCcEEeecCCCCCCCC-----c-------cCCcceeeCCCCCceeeeeeeecCCce----------
Q psy8771 790 IWVLAGTSIGDGPSSYPITIRTHEDDPSEV-----C-------PTQNDFRKNKKTNGSNFKGGYLNDPMR---------- 847 (904)
Q Consensus 790 ~~V~a~~~~g~g~~s~~~~~~t~~~~P~~v-----~-------~~~~~W~~p~~~~~~~~~~~~~~~~~~---------- 847 (904)
|+|+|.|..|.|+++. +.++|...+|++. . .+.++|.+|...+|.|..|.+......
T Consensus 541 ~~V~A~n~~G~g~~s~-~~~~T~~~~P~~p~~~~~~~~~~~~~si~l~W~pp~~~~g~I~~Y~v~~~~~~~~~~~~~~~~ 619 (731)
T 2v5y_A 541 FTIRASTAKGFGPPAT-NQFTTKISAPSMPAYELETPLNQTDNTVTVMLKPAHSRGAPVSVYQIVVEEERPRRTKKTTEI 619 (731)
T ss_dssp EEEEEEETTEEEEEEE-EEEECCCCCCCC---------------------------------------------------
T ss_pred EEEEEEeCCccCCCcc-cEEEcCCCCCCCCCcccccccccCCceEEEEEeCCCCCCCceEEEEEEEEecCCCCCcccccc
Confidence 9999999999999884 8888988777541 1 122399988877777765544211000
Q ss_pred EE----------------------------------ecCCC---eeEEEEcCCCCCcEEEEEEEEEecCCCCCCCCceEE
Q psy8771 848 FD----------------------------------VSDGG---ALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETI 890 (904)
Q Consensus 848 ~~----------------------------------~~~~~---~~~~~i~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~ 890 (904)
.. ..-++ ...|...+|+||+.|.|+|+|++..|.|..+..+.+
T Consensus 620 ~~~~~~~~~~~~~~~~~~~~y~aa~~~p~~~~~~~~~~vg~~~~~~~~~n~~L~p~~~Y~i~v~A~s~~g~~~~~~~v~~ 699 (731)
T 2v5y_A 620 LKCYPVPIHFQNASLLNSQYYFAAEFPADSLQAAQPFTIGDNKTYNGYWNTPLLPYKSYRIYFQAASRANGETKIDCVQV 699 (731)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCcccccCHHHHhhcCCcceEEEEcChhhCcccCCEEECCCCeECCEECCCCCCCCceEEEEEEEEecCCCcEeeeEEE
Confidence 00 00000 123444569999999999999999999988888888
Q ss_pred ecCC
Q psy8771 891 KTPG 894 (904)
Q Consensus 891 ~t~~ 894 (904)
.|.+
T Consensus 700 ~t~~ 703 (731)
T 2v5y_A 700 ATKG 703 (731)
T ss_dssp ----
T ss_pred eccc
Confidence 8873
No 4
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=100.00 E-value=6e-38 Score=363.75 Aligned_cols=446 Identities=18% Similarity=0.288 Sum_probs=319.1
Q ss_pred CCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCC-cceEEEeecCCeEEEEEeCC----CccceEEEEEEEeCCC-
Q psy8771 167 ESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAP-LDVKISEVTATSVRLDWTYP----SETLLYYVIQYKPKAA- 240 (904)
Q Consensus 167 d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p-~~l~~~~~~~~sv~l~W~~~----~~~~~~y~v~~~~~~~- 240 (904)
..|.+.| +.|..|..-......+. ..|.+| .+|++...+.+++.|+|+++ ..++. |.|+|+...+
T Consensus 134 c~g~~~C-c~n~cG~~C~~P~~~~~-------~~P~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~ 204 (680)
T 1zlg_A 134 CSGVKKC-CSNGCGHTCQVPKTLYK-------GVPLKPRKELRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGI 204 (680)
T ss_pred CCCcccc-ccccccccccccceeee-------cccccccccceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCC
Confidence 5577777 45555653332233344 788899 89999999999999999987 34566 9999997632
Q ss_pred ---C---CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCC-CeEEecCCCCCCCCCCceEecccCCCeeEE
Q psy8771 241 ---N---TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSS-PAVITTGETEPGTAPRDVQVRPLSSSTMVI 313 (904)
Q Consensus 241 ---~---~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~-~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l 313 (904)
. ..|..+.......++|.+|.|++.|.|+|.|.|..|.+.++. ...+.+.
T Consensus 205 ~~~~~~~~~w~~v~~~~~~~~~i~~L~P~t~Y~frV~A~n~~G~~~~ss~s~~~~t~----------------------- 261 (680)
T 1zlg_A 205 HPSEDDATHWQTVAQTTDERVQLTDIRPSRWYQFRVAAVNVHGTRGFTAPSKHFRSS----------------------- 261 (680)
T ss_pred CcCccccCceEEEEecCCCeEEeCCCCCCCEEEEEEEEEeCCCCCCCCCCccceEcC-----------------------
Confidence 1 456666555567899999999999999999999888432211 1111100
Q ss_pred EecCCCCCCceeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccc
Q psy8771 314 QWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRI 393 (904)
Q Consensus 314 ~W~~p~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~ 393 (904)
T Consensus 262 -------------------------------------------------------------------------------- 261 (680)
T 1zlg_A 262 -------------------------------------------------------------------------------- 261 (680)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeeEEEEeccccCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCce
Q psy8771 394 GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIP 473 (904)
Q Consensus 394 ~~~~~~~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~ 473 (904)
T Consensus 262 -------------------------------------------------------------------------------- 261 (680)
T 1zlg_A 262 -------------------------------------------------------------------------------- 261 (680)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeecCCCCCCCCCCeEEEec--CCc---eEEEEecCCCCCCCceeeEEEEEEeC-C---CCCCcceEEEee-cCceEEEE
Q psy8771 474 VRTKQYEPGTAPRDVQVRPL--SSS---TMVIQWDEPETPNGQITGYKVYYTQD-Q---SLPMSAWETQVV-DNNQLTTI 543 (904)
Q Consensus 474 ~~t~~~~p~~~p~~l~v~~~--~~~---~~~l~W~~p~~~~~~i~~Y~v~~~~~-~---~~~~~~~~~~~~-~~~~~~~~ 543 (904)
....|+.+|.++.+... +.+ +|.|+|++|...++.+.+|.|+|+.. + ......|..... ...+.+.|
T Consensus 262 ---~~~~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l 338 (680)
T 1zlg_A 262 ---KDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEEPDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVIL 338 (680)
T ss_pred ---CCCCCCCCCCceEeeeeeecCCCceEEEEEecCCCCCCCceeEEEEEEEecccccccCCccceEEEEEcCCeeEEEe
Confidence 00034578889998887 777 99999999887788999999999832 1 112235655444 45578999
Q ss_pred cCCCCCCeEEEEEEEEeCCCCCCCCCc---EEEecCCCCCCCCCCceEEecCCCeEEE-----------EEeCCCCCCCC
Q psy8771 544 SDLTPHTIYTIRVQAFTSVGPGPLSAP---VLVKTQQGVPSQPRDLRAVDIQETAVTL-----------AWSKPTHSGEN 609 (904)
Q Consensus 544 ~~L~p~t~Y~~~V~a~~~~g~~~~S~~---~~~~t~~~~p~~p~~~~~~~~~~~~~~l-----------~W~~~~~~~~~ 609 (904)
.+|.|++.|.|+|+|+|..|.|++|.. +.+.|....|. |.++.+...+.+++.| +|.++... +.
T Consensus 339 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~v~~~T~~~~P~-p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~~~-~~ 416 (680)
T 1zlg_A 339 EKLQPDCDYVVELQAITYWGQTRLKSAKVSLHFTSTHATNN-KEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFYQ-DG 416 (680)
T ss_pred CCCCCCCEEEEEEEEEECCCcCCCCCCceeEEEECCCCCCC-ccccccccccCccccccccccCCCccccccCCccc-CC
Confidence 999999999999999999999988877 78888887777 8889988888888877 99998643 34
Q ss_pred ceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc------cceEEecccceEEEeCCC
Q psy8771 610 IISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA------KHHRRIGLVETYSLTGLY 683 (904)
Q Consensus 610 ~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~------~~~~~~~~~~~~~l~~L~ 683 (904)
+.+|+|.|.. . ..+.+.+|.|+|....... .........+++.|.+|+
T Consensus 417 ~~~y~v~w~~------------------------~--~~~~v~~Y~V~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~ 470 (680)
T 1zlg_A 417 QLQVKVYWKK------------------------T--EDPTVNRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLS 470 (680)
T ss_pred cceEEEEEeC------------------------C--CCCccceEEEEEeeeecccCCCCcceeeeeeccCceEEecCCC
Confidence 5677777654 1 2234688999886542211 112234456789999999
Q ss_pred CCcEEEEEEEEEcCCCCCCCCCCeeEEecC-----------------CCCC-----CCCCC----cEEEecCCCEEEEEe
Q psy8771 684 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQ-----------------YVPG-----APPQN----VSCEPLSSTSIRISW 737 (904)
Q Consensus 684 p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~-----------------~~p~-----~~P~~----l~~~~~~~~~v~l~W 737 (904)
|++.|.|+|+|+|..|.+... ...+.|.. ..|. .+|.+ +.+...+.+ +.|+|
T Consensus 471 p~t~Y~~~V~A~n~~G~s~~~-~~~f~T~~~~~~~~~~~~~v~~~~~~~P~~~~v~~~P~~l~~~v~v~~~~~t-i~lsW 548 (680)
T 1zlg_A 471 FSCKYKVTVQPIRPKSHSKAE-AVFFTTPPCSALKGKSHKPIGCLGEAGHVLSKVLAKPENLSASFIVQDVNIT-GHFSW 548 (680)
T ss_pred CCCeEEEEEEEecCCCCCCcc-ccceeCCCccccccCCccccccCCCCccccccccCCccccceeEEEeccCce-EEEEe
Confidence 999999999999999965421 12222211 0111 46777 566666555 99999
Q ss_pred cCCCCCCCCccEEEEEEEEEEccCCCC----ccEE----EEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEE
Q psy8771 738 EPPPVERSNGHIVYYKLQFVETGRSDS----EASI----VTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPIT 808 (904)
Q Consensus 738 ~~~~~~~~~g~~~~Y~v~~~~~~~~~~----~~~~----~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~ 808 (904)
++|.. ..||.|.+|.|+|+....... .... ..+. +.+.++|.+|+|++.|.|+|+|.|..|.|+. .++.
T Consensus 549 ~pP~~-~~ng~I~gY~V~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~-~~~~ 626 (680)
T 1zlg_A 549 KMAKA-NLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPSDHYVLTVPNLRPSTLYRLEVQVLTPGGEGPA-TIKT 626 (680)
T ss_pred cCCCC-CCCCCceeEEEEEEEccCCCccccccceeeecccccCCcccEEEecCCCCCceEEEEEEEEcCCCcCCC-cceE
Confidence 99963 348999999999987643221 0011 1122 5789999999999999999999999999988 7788
Q ss_pred eecCCCCCCCCccC------CcceeeCCCCCceeeee
Q psy8771 809 IRTHEDDPSEVCPT------QNDFRKNKKTNGSNFKG 839 (904)
Q Consensus 809 ~~t~~~~P~~v~~~------~~~W~~p~~~~~~~~~~ 839 (904)
++|...+|++...+ .++|++|...+|..+.+
T Consensus 627 ~~T~~~~P~~P~~l~v~~~~~l~W~pP~~~~G~~I~~ 663 (680)
T 1zlg_A 627 FRTPELPPSSAHRSHLKHRHPHHYKPSPERYGKPIPN 663 (680)
T ss_pred EECCCCCCCCCCCCeEEeccceeECCCCCCCCCccce
Confidence 99988877553322 33999998888865533
No 5
>3l5h_A Interleukin-6 receptor subunit beta; IG-like, FNIII, cell membrane, disulfide bond, glycoprotein, immunoglobulin domain, membrane, phosphoprotein; HET: NAG NDG BMA FUC; 3.60A {Homo sapiens}
Probab=100.00 E-value=9e-39 Score=369.02 Aligned_cols=398 Identities=18% Similarity=0.240 Sum_probs=292.6
Q ss_pred Cceeee-eccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEE--EecCCceEEEEecCCCCCCCceeeEE
Q psy8771 440 PGFGEQ-ALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQV--RPLSSSTMVIQWDEPETPNGQITGYK 516 (904)
Q Consensus 440 ~~~~~~-~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v--~~~~~~~~~l~W~~p~~~~~~i~~Y~ 516 (904)
..|.+. +|.+++.|.|+|.|.|..|.+. +....+.+....++.+|.++.+ ...+.+++.|+|++|...++.+.+|.
T Consensus 157 ~~c~~~~~l~~~~~Y~~~v~a~n~~G~~~-s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~v~l~W~~p~~~~~~~~~Y~ 235 (589)
T 3l5h_A 157 TSCTVDYSTVYFVNIEVWVEAENALGKVT-SDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSIKSVIILKYN 235 (589)
T ss_dssp SCCBCCSCCCSSSCEEECEEEEESSCCBC-CCCEEECGGGSEECCCCCSCEEECTTTCTTCEEEECCCCGGGGTSCEEEE
T ss_pred EEEEECCCCchheeEEEEEEEEeCCCCcc-cccEEEccccEEEcCCCceEEEEecCCCCCeEEEEeCCCCCCCeeeEEEE
Confidence 445666 7999999999999999999863 4445555554456789999998 45688899999999877677889999
Q ss_pred EEEEeCCCCCCcceEEEe----ecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCC---CCcEEEecCCCCCC-CCCCceE
Q psy8771 517 VYYTQDQSLPMSAWETQV----VDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPL---SAPVLVKTQQGVPS-QPRDLRA 588 (904)
Q Consensus 517 v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~---S~~~~~~t~~~~p~-~p~~~~~ 588 (904)
|+|+..+. ..|.... .....++.+.+|.|++.|.|+|+|.|..|.|.+ |..+.+.|....|. +|..+..
T Consensus 236 v~~~~~~~---~~w~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~S~~S~~~~~~T~~~~P~~~p~~~~~ 312 (589)
T 3l5h_A 236 IQYRTKDA---STWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYEDRPSKAPSFWYK 312 (589)
T ss_dssp EEEEETTC---SCCBCCCTTSSCSCCSEEEECSCCSSCCEEEEEEEEESSSCSCCCCCCCCBCCCCCCCCCCSCCCEEEE
T ss_pred EEECCCCC---CCcEEEccccCcCceeEEEECCCCCCCEEEEEEEEEeCCCCCccCCCCCccccccCccCCCCCCcEEEE
Confidence 99998764 3354432 234578999999999999999999999988765 56667788777774 5654443
Q ss_pred ----EecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcc
Q psy8771 589 ----VDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK 664 (904)
Q Consensus 589 ----~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~ 664 (904)
...+.+++.|.|+++.. ...++.+.+|.|.|+..+..
T Consensus 313 v~~~~~~~~~~v~l~W~p~~~---------------------------------------~~~~g~i~~Y~v~~~~~~~~ 353 (589)
T 3l5h_A 313 IDPSHTQGYRTVQLVWKTLPP---------------------------------------FEANGKILDYEVTLTRWKSH 353 (589)
T ss_dssp CCSCSSTTSCCEEEEECCCCT---------------------------------------TTSSSCCCEEEEEECCTTSC
T ss_pred eecCcCCCcceEEEEEeeCCc---------------------------------------hhccCceeeEEEEEecCCCC
Confidence 24567899999997421 12566788888888665443
Q ss_pred ccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCC
Q psy8771 665 AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVER 744 (904)
Q Consensus 665 ~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~ 744 (904)
... .......++ .|.+++.|.|+|+|+|..|.|.++. +.+.+....+..||.++.+... .+++.|+|++|..
T Consensus 354 ~~~--~~~~~~~~~--~l~~~~~Y~~~V~A~n~~G~~~~s~-~~~~~~~~~~~~p~~~l~~~~~-~~si~l~W~~p~~-- 425 (589)
T 3l5h_A 354 LQN--YTVNATKLT--VNLTNDRYLATLTVRNLVGKSDAAV-LTIPACDFQATHPVMDLKAFPK-DNMLWVEWTTPRE-- 425 (589)
T ss_dssp CCB--CCCSSSCCE--ECCCSSCCCEEEEEEBTTBCCCCCC-CCCCCTTCCCCSCCCSCEEEEC-SSSEEEECCCCSS--
T ss_pred cee--eccCCceEE--EEeCCCCEEEEEEEEeCCccCCCeE-EEeecccccCCCCcceEEEEEC-CCeEEEEEECCCC--
Confidence 221 112223443 3899999999999999999998875 3344433344556778888765 6899999999842
Q ss_pred CCccEEEEEEEEEEccCCCC-ccEEEEec--CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCCC---
Q psy8771 745 SNGHIVYYKLQFVETGRSDS-EASIVTLK--NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSE--- 818 (904)
Q Consensus 745 ~~g~~~~Y~v~~~~~~~~~~-~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~~--- 818 (904)
.+.+|.|+|+..+.... ...+..+. ....+.+.+|.|++.|.|+|+|.+..|.|..+ .+.+.|...+|..
T Consensus 426 ---~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~g~g~~~-~~~~~t~~~~P~~pp~ 501 (589)
T 3l5h_A 426 ---SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSPE-SIKAYLKQAPPSKGPT 501 (589)
T ss_dssp ---CCSCBCCEEEEECSSSCCCEEECCBCSSCCEEECCSCCCSSSEEEEEECBEETTEECCCE-EEEEESSCCCCSSCCC
T ss_pred ---CccEEEEEEEECCCCCCCccCcEEeeCCcceEEehhccccCcEEEEEEEEEeCCcccCCE-EEEEEeccCCCCCCCe
Confidence 58899999998765322 11222333 45567779999999999999999999988775 4667777666633
Q ss_pred Ccc-------CCcceeeC--CCCCceeeeeeee----cCCceEEecCCCeeEEEEcCCCCCcEEEEEEEEEecCCCCCCC
Q psy8771 819 VCP-------TQNDFRKN--KKTNGSNFKGGYL----NDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRS 885 (904)
Q Consensus 819 v~~-------~~~~W~~p--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~n~~G~g~~s 885 (904)
+.. +.++|.++ ...+|.|..|.+. ++......++.+.+++.|.+|.||+.|.|+|+|.|..| |..|
T Consensus 502 l~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G-~~~S 580 (589)
T 3l5h_A 502 VRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTDEG-GKDG 580 (589)
T ss_dssp CCEECCCSSCBEEBCCCCCHHHHCSCEEEEEECCBCSSCCCCCEEECTTCCBCCBCSCCSSCCEECCEEEEETTE-EEEC
T ss_pred EEEeecccceEEEEecCCCHHHcCccceeEEEEEEeCCCCeEEEEeCCcccEEEecCCCCCCEEEEEEEEEeCCC-CCCC
Confidence 221 22299974 3556766655543 22333345678889999999999999999999999999 8899
Q ss_pred CceEEecC
Q psy8771 886 KPETIKTP 893 (904)
Q Consensus 886 ~~~~~~t~ 893 (904)
..+.++|.
T Consensus 581 ~~~~~~T~ 588 (589)
T 3l5h_A 581 PEFTFTTP 588 (589)
T ss_dssp CCCEECCC
T ss_pred CCeEEecC
Confidence 99999885
No 6
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=100.00 E-value=6e-35 Score=316.51 Aligned_cols=344 Identities=21% Similarity=0.327 Sum_probs=267.8
Q ss_pred CCCCCCCeEEEecCCc-eEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771 481 PGTAPRDVQVRPLSSS-TMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF 559 (904)
Q Consensus 481 p~~~p~~l~v~~~~~~-~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~ 559 (904)
|+.+|.+|++...+.+ ++.|+|+++.. +.+.+|+|+|+...+.....|........+++.+.+|.|++.|.|+|+|.
T Consensus 2 P~~~P~~l~~~~~~~~~sv~l~W~~~~~--~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~ 79 (375)
T 3t1w_A 2 PLSPPTNLHLEANPDTGVLTVSWERSTT--PDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTV 79 (375)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECCSC--SSCCEEEEEEEETTCTTSCCEEEEEETTCCEEEECCCCTTCCEEEEEEEE
T ss_pred CCCCCCccEEEecCCCeEEEEEEeCCCC--CCeeeEEEEEEECCCCCCcceeEEcCCCccEEEEcCCcCCCEEEEEEEEE
Confidence 6789999999999989 99999999753 46899999999977544445555555778899999999999999999999
Q ss_pred eCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEE
Q psy8771 560 TSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTL 639 (904)
Q Consensus 560 ~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l 639 (904)
|..|. |......+....| +|.++.+...+.+++.|+|.++
T Consensus 80 ~~~g~---s~~~~~~~~~~~p-~p~~l~~~~~~~~si~l~W~~~------------------------------------ 119 (375)
T 3t1w_A 80 KDDKE---SVPISDTIIPEVP-QLTDLSFVDITDSSIGLRWTPL------------------------------------ 119 (375)
T ss_dssp ETTEE---CCCEEEEECCCCC-CCSCCEEECCCSSEEEEECCCC------------------------------------
T ss_pred cCCCC---CCcEEeeEcCCCC-CCceEEEEecCCCeEEEEEECC------------------------------------
Confidence 98764 4455566656565 4899999999999999999987
Q ss_pred eccCCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC
Q psy8771 640 AWSKPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG 717 (904)
Q Consensus 640 ~w~~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~ 717 (904)
.++.+.+|.|+|+..+.... ..........+.|.+|.|++.|.|+|+|+|..|.|.++. ..+.| .|.
T Consensus 120 -------~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~-~~~~t---~~~ 188 (375)
T 3t1w_A 120 -------NSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTT-LTQQT---AVP 188 (375)
T ss_dssp -------CCTTEEEEEEEEEESSSCCSCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEE-EEEEC---CCC
T ss_pred -------CCCCceEEEEEEEECCCCCceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCee-eeeec---CCC
Confidence 34578999999988765543 223445667999999999999999999999999887764 44445 233
Q ss_pred CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT 796 (904)
Q Consensus 718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~ 796 (904)
+|.++.+...+.+++.|+|++|. ++.+.+|.|+|+..+.... .....+. ..+.+.+.+|.+++.|.|+|+|.|
T Consensus 189 -~p~~l~~~~~~~~si~l~W~~p~----~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~ 262 (375)
T 3t1w_A 189 -PPTDLRFTNIGPDTMRVTWAPPP----SIDLTNFLVRYSPVKNEED-VAELSISPSDNAVVLTNLLPGTEYVVSVSSVY 262 (375)
T ss_dssp -CCEEEEEESCCSSCEEEEEECCS----SCCCCEEEEEEEEGGGTTC-CEEEEECTTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred -CCceeEEEecccCEEEEEEcCCC----CCCccEEEEEEEeCCCCCC-cEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEc
Confidence 67899999899999999999973 3678999999998764332 2334444 779999999999999999999999
Q ss_pred CCCCCCCCCcEEeecCCCCCCCCccC-------CcceeeCC-CCCceeeeeeeecC--CceEEecCCCeeEEEEcCCCCC
Q psy8771 797 SIGDGPSSYPITIRTHEDDPSEVCPT-------QNDFRKNK-KTNGSNFKGGYLND--PMRFDVSDGGALELNVTGLQPD 866 (904)
Q Consensus 797 ~~g~g~~s~~~~~~t~~~~P~~v~~~-------~~~W~~p~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~ 866 (904)
..|.|..+. ..+.|.+.+|..+... .++|++|. ...+|.+.+...+. ......+....+++.|.+|.||
T Consensus 263 ~~g~s~~~~-~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 341 (375)
T 3t1w_A 263 EQHESTPLR-GRQKTGLDSPTGIDFSDITANSFTVHWIAPRATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPG 341 (375)
T ss_dssp TTEECCCEE-EEEECCCCCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEETTCCSSCEEEEEETTCCEEEECSCCTT
T ss_pred CCCcCCcee-eEEecCCCCCCccEeeeccCCEEEEEECCCCcceeeEEEEEEECCCCCcceeEEcCCCccEEEECCCCCC
Confidence 998887653 5567777777553322 22999764 23445554444332 2333456788899999999999
Q ss_pred cEEEEEEEEEecCCCCCC
Q psy8771 867 TIYTIQVAALTRKGDGDR 884 (904)
Q Consensus 867 t~Y~~~v~a~n~~G~g~~ 884 (904)
+.|.|+|+|+|..|.|+.
T Consensus 342 t~Y~~~V~A~~~~G~s~p 359 (375)
T 3t1w_A 342 TEYVVSIVALNGREESPL 359 (375)
T ss_dssp CEEEEEEEEEETTEECCC
T ss_pred CEEEEEEEEECCCCCCCc
Confidence 999999999999998844
No 7
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=100.00 E-value=8.5e-35 Score=314.58 Aligned_cols=345 Identities=19% Similarity=0.278 Sum_probs=263.3
Q ss_pred CCCCCCCeEEEecCCc-eEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771 481 PGTAPRDVQVRPLSSS-TMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF 559 (904)
Q Consensus 481 p~~~p~~l~v~~~~~~-~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~ 559 (904)
|+.+|.+|++...+.+ ++.|+|+++. ++.+.+|.|+++...+.....|........+++.+.+|.|++.|.|+|+|.
T Consensus 1 Pp~~P~~l~~~~~~~~~sv~l~W~~~~--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~ 78 (368)
T 1fnf_A 1 PLSPPTNLHLEANPDTGVLTVSWERST--TPDITGYRITTTPTNGQQGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTV 78 (368)
T ss_dssp CCCCCEEEEEEECSSSSCEEEEEECCS--CSSCCEEEEEEEETTTCSSCCEEEEECTTCCEEECCCCCTTSCEEEEEEEE
T ss_pred CCCCCcceEEEecCCCcEEEEEEeCCC--CCCceEEEEEEEECCCCCCceeEEEecCCcCEEEECCCCCCCEEEEEEEEE
Confidence 5689999999988876 6999999986 367899999999876544445666566778899999999999999999999
Q ss_pred eCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEE
Q psy8771 560 TSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTL 639 (904)
Q Consensus 560 ~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l 639 (904)
|..|.+.. ....+.+.+ ++|.++.+...+.+++.|+|.++.
T Consensus 79 ~~~g~s~~---~~~~~~~~~-~~p~~l~~~~~~~~si~l~W~~p~----------------------------------- 119 (368)
T 1fnf_A 79 KDDKESVP---ISDTIIPAV-PPPTDLRFTNIGPDTMRVTWAPPP----------------------------------- 119 (368)
T ss_dssp ETTEECCC---EEEEECCCC-CCCEEEEEESCCSSCEEEEEECCT-----------------------------------
T ss_pred cCCCccCc---eeeeecCCC-cCCceeEEEEcCCCeEEEEeeCCC-----------------------------------
Confidence 99886543 334443333 478999999989999999999983
Q ss_pred eccCCCCCCCceeeEEEEEEeCCcccc-ce-EEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC
Q psy8771 640 AWSKPTHSGENIISYELYWNDTYAKAK-HH-RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG 717 (904)
Q Consensus 640 ~w~~~~~~~~~~~~y~v~~~~~~~~~~-~~-~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~ 717 (904)
++.+.+|.|+|+..+.... .. .......++.+.+|.|++.|.|+|+|++..|.+.+ ....+. .+.
T Consensus 120 --------~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~---~~~~~~--~~~ 186 (368)
T 1fnf_A 120 --------SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTP---LRGRQK--TGL 186 (368)
T ss_dssp --------TCCCSEEEEEEEETTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCC---EEEEEE--CCC
T ss_pred --------CCCCcEEEEEEEECCCCCccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCCCCC---eEeeec--CCC
Confidence 4568889999987665432 22 23445679999999999999999999999887654 333222 123
Q ss_pred CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT 796 (904)
Q Consensus 718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~ 796 (904)
.+|.+|.+...+.+++.|+|+++. +.+.+|.|+++..+.... .....+. ..+.+++.+|.+++.|.|+|+|.|
T Consensus 187 ~~P~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 260 (368)
T 1fnf_A 187 DSPTGIDFSDITANSFTVHWIAPR-----ATITGYRIRHHPEHFSGR-PREDRVPHSRNSITLTNLTPGTEYVVSIVALN 260 (368)
T ss_dssp CCCEEEEEESCCSSEEEEEEECCS-----SCCSEEEEEEECSCCSSC-CEEEEEETTCCEEEEESCCTTCEEEEEEEEEE
T ss_pred CCCCccEEEEccCCEEEEEEeCCC-----CCcCEEEEEEecCCCCCC-ccEEEeCCCcCEEEECCCCCCCEEEEEEEEEe
Confidence 367899999999999999999873 568999999997764322 2334444 888999999999999999999999
Q ss_pred CCCCCCCCCcEEeecCCCCCCCCcc-------CCcceeeCCC-CCceeeeeeeecCC--ceEEecCCCeeEEEEcCCCCC
Q psy8771 797 SIGDGPSSYPITIRTHEDDPSEVCP-------TQNDFRKNKK-TNGSNFKGGYLNDP--MRFDVSDGGALELNVTGLQPD 866 (904)
Q Consensus 797 ~~g~g~~s~~~~~~t~~~~P~~v~~-------~~~~W~~p~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~L~p~ 866 (904)
..|.|..+. ....+.+.+|..+.. +.++|.+|.. ..+|.+.+...++. .....+.+..+.+.+.+|+||
T Consensus 261 ~~g~~~~~~-~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~ 339 (368)
T 1fnf_A 261 GREESPLLI-GQQSTVSDVPRDLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPG 339 (368)
T ss_dssp TTEECCCEE-EEEECCCCSCEEEEEEEEETTEEEEEEECCSSCCSEEEEEEEETTCCSCCEEEEEETTCCEEEECSCCTT
T ss_pred CCccCCccc-ccccCCCCCCCeeEEEecCCCEEEEEeeCCCCccceEEEEEEECCCCCccEEEEcCCCeeEEEecCCCCC
Confidence 999887654 456677777754332 2239997754 34555554433322 122345678899999999999
Q ss_pred cEEEEEEEEEecCCCCCCCC
Q psy8771 867 TIYTIQVAALTRKGDGDRSK 886 (904)
Q Consensus 867 t~Y~~~v~a~n~~G~g~~s~ 886 (904)
+.|.|+|+|+|..|.|..|.
T Consensus 340 t~Y~~~V~A~~~~G~g~~s~ 359 (368)
T 1fnf_A 340 VDYTITVYAVTGRGDSPASS 359 (368)
T ss_dssp CCEEEEEEEECCCSSSCCBC
T ss_pred CEEEEEEEEeCCCCcCcccC
Confidence 99999999999999998765
No 8
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=100.00 E-value=3.7e-34 Score=331.92 Aligned_cols=371 Identities=17% Similarity=0.265 Sum_probs=268.6
Q ss_pred CCCC-CCeEEEecCCceEEEEecCCCCC-CCceeeEEEEEEeCCC-----CCCcceEEEeecCceEEEEcCCCCCCeEEE
Q psy8771 482 GTAP-RDVQVRPLSSSTMVIQWDEPETP-NGQITGYKVYYTQDQS-----LPMSAWETQVVDNNQLTTISDLTPHTIYTI 554 (904)
Q Consensus 482 ~~~p-~~l~v~~~~~~~~~l~W~~p~~~-~~~i~~Y~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~ 554 (904)
|.+| .+|.+...+.+++.|+|++|.+. +..+. |.|+|+...+ .....|........+.+.+.+|.|++.|.|
T Consensus 160 P~~P~~~l~v~~~~~~sv~l~W~pp~~~~~~~i~-Y~V~~r~~~g~~~~~~~~~~w~~v~~~~~~~~~i~~L~P~t~Y~f 238 (680)
T 1zlg_A 160 PLKPRKELRFTELQSGQLEVKWSSKFNISIEPVI-YVVQRRWNYGIHPSEDDATHWQTVAQTTDERVQLTDIRPSRWYQF 238 (680)
T ss_pred cccccccceEEeccCceEEEEEeCCCCCCCCCEE-EEEEEEECCCCCcCccccCceEEEEecCCCeEEeCCCCCCCEEEE
Confidence 3567 79999999999999999998543 34566 9999998632 112467776666677899999999999999
Q ss_pred EEEEEeCCC-CCCCCCcEEEecCC--CCCCCCCCceEEec--CCC---eEEEEEeCCCCCCCCceEEEEEeccCCCCCcc
Q psy8771 555 RVQAFTSVG-PGPLSAPVLVKTQQ--GVPSQPRDLRAVDI--QET---AVTLAWSKPTHSGENIISYELYWNDTYAKPRD 626 (904)
Q Consensus 555 ~V~a~~~~g-~~~~S~~~~~~t~~--~~p~~p~~~~~~~~--~~~---~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~ 626 (904)
+|+|+|..| .+..+....+.+.. .+|.+|.++++... +.+ ++.|+|.+|..
T Consensus 239 rV~A~n~~G~~~~ss~s~~~~t~~~~~pp~~P~~l~~~~~~~~~~g~~sv~l~W~pP~~--------------------- 297 (680)
T 1zlg_A 239 RVAAVNVHGTRGFTAPSKHFRSSKDPSAPPAPANLRLANSTVNSDGSVTVTIVWDLPEE--------------------- 297 (680)
T ss_pred EEEEEeCCCCCCCCCCccceEcCCCCCCCCCCCceEeeeeeecCCCceEEEEEecCCCC---------------------
Confidence 999999998 44444455566644 46778999999887 777 99999998865
Q ss_pred eEEEeeccceEEEeccCCCCCCCceeeEEEEEEeC-C------ccccce-EEecccceEEEeCCCCCcEEEEEEEEEcCC
Q psy8771 627 LRAVDIQETAVTLAWSKPTHSGENIISYELYWNDT-Y------AKAKHH-RRIGLVETYSLTGLYPNTLYYIWLAAQSPR 698 (904)
Q Consensus 627 l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~-~------~~~~~~-~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~ 698 (904)
.++.+.+|.|+|+.. + ...+.. ......+.++|.+|.|++.|.|+|+|+|..
T Consensus 298 --------------------~~g~i~~Y~V~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~n~~ 357 (680)
T 1zlg_A 298 --------------------PDIPVHHYKVFWSWMVSSKSLVPTKKKRRKTTDGFQNSVILEKLQPDCDYVVELQAITYW 357 (680)
T ss_pred --------------------CCCceeEEEEEEEecccccccCCccceEEEEEcCCeeEEEeCCCCCCCEEEEEEEEEECC
Confidence 456677777777622 1 011212 223345789999999999999999999999
Q ss_pred CCCCCCCC---eeEEecCCCCCCCCCCcEEEecCCCEEEE-----------EecCCCCCCCCccEEEEEEEEEEccCCCC
Q psy8771 699 GEGATTPP---IPVRTKQYVPGAPPQNVSCEPLSSTSIRI-----------SWEPPPVERSNGHIVYYKLQFVETGRSDS 764 (904)
Q Consensus 699 G~~~~s~~---~~~~t~~~~p~~~P~~l~~~~~~~~~v~l-----------~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~ 764 (904)
|.|.++.. +.++|...+|. |.++.+...+.+++.| +|.+|.. ++.+.+|.|+|...+....
T Consensus 358 G~g~~S~~~~~v~~~T~~~~P~--p~~l~~~~~s~tsi~lp~~~~~~~~~l~W~~P~~---~~~~~~y~v~w~~~~~~~v 432 (680)
T 1zlg_A 358 GQTRLKSAKVSLHFTSTHATNN--KEQLVKTRKGGIQTQLPFQRRRPTRPLEVGAPFY---QDGQLQVKVYWKKTEDPTV 432 (680)
T ss_pred CcCCCCCCceeEEEECCCCCCC--ccccccccccCccccccccccCCCccccccCCcc---cCCcceEEEEEeCCCCCcc
Confidence 99988877 88888888776 6889888888888877 9999842 2345688888876553210
Q ss_pred c------------------cEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecC-------------
Q psy8771 765 E------------------ASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTH------------- 812 (904)
Q Consensus 765 ~------------------~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~------------- 812 (904)
. ....... ..+.+.|.+|.|++.|.|+|+|.|..|.|.. ....|.|.
T Consensus 433 ~~Y~V~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~s~~-~~~~f~T~~~~~~~~~~~~~v 511 (680)
T 1zlg_A 433 NRYHVRWFPEACAHNRTTGSEASSGMTHENYIILQDLSFSCKYKVTVQPIRPKSHSKA-EAVFFTTPPCSALKGKSHKPI 511 (680)
T ss_pred ceEEEEEeeeecccCCCCcceeeeeeccCceEEecCCCCCCeEEEEEEEecCCCCCCc-cccceeCCCccccccCCcccc
Confidence 0 0111122 6788999999999999999999999996542 11212221
Q ss_pred -------------CCCCCCC----c------cCCcceeeCC-CCCceeeeeeeecC----Cc----eE-------EecCC
Q psy8771 813 -------------EDDPSEV----C------PTQNDFRKNK-KTNGSNFKGGYLND----PM----RF-------DVSDG 853 (904)
Q Consensus 813 -------------~~~P~~v----~------~~~~~W~~p~-~~~~~~~~~~~~~~----~~----~~-------~~~~~ 853 (904)
..+|..+ . .+.++|++|. ..+|.|..|.+... .. .. ..+.+
T Consensus 512 ~~~~~~~P~~~~v~~~P~~l~~~v~v~~~~~ti~lsW~pP~~~~ng~I~gY~V~y~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (680)
T 1zlg_A 512 GCLGEAGHVLSKVLAKPENLSASFIVQDVNITGHFSWKMAKANLYQPMTGFQVTWAEVTTESRQNSLPNSIISQSQILPS 591 (680)
T ss_pred ccCCCCccccccccCCccccceeEEEeccCceEEEEecCCCCCCCCCceeEEEEEEEccCCCccccccceeeecccccCC
Confidence 0233331 1 1334999886 34666655543221 11 10 11335
Q ss_pred CeeEEEEcCCCCCcEEEEEEEEEecCCCCCCCCceEEecCCCCCCCCc
Q psy8771 854 GALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNRPH 901 (904)
Q Consensus 854 ~~~~~~i~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~t~~~~p~~p~ 901 (904)
+.+++.|.+|+|++.|.|+|+|+|..|.|+. .+..++|...+|.+|.
T Consensus 592 ~~~~~~l~~L~p~t~Y~~~V~A~n~~G~G~~-~~~~~~T~~~~P~~P~ 638 (680)
T 1zlg_A 592 DHYVLTVPNLRPSTLYRLEVQVLTPGGEGPA-TIKTFRTPELPPSSAH 638 (680)
T ss_pred cccEEEecCCCCCceEEEEEEEEcCCCcCCC-cceEEECCCCCCCCCC
Confidence 6789999999999999999999999999987 8889999998888887
No 9
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=100.00 E-value=1.7e-33 Score=304.42 Aligned_cols=259 Identities=23% Similarity=0.369 Sum_probs=201.3
Q ss_pred CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe-ecCceEEEEcCCCCCCeEEEEEEEEeCC
Q psy8771 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV-VDNNQLTTISDLTPHTIYTIRVQAFTSV 562 (904)
Q Consensus 484 ~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~ 562 (904)
+|.++.+...+.+++.|+|+++. ++.+.+|.|+|+..... ..|.... ......+.+.+|.|++.|.|+|+|.|..
T Consensus 97 ~p~~l~~~~~~~~si~l~W~~p~--~~~~~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~ 172 (368)
T 1fnf_A 97 PPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLVRYSPVKNE--EDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQ 172 (368)
T ss_dssp CCEEEEEESCCSSCEEEEEECCT--TCCCSEEEEEEEETTCT--TCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred CCceeEEEEcCCCeEEEEeeCCC--CCCCcEEEEEEEECCCC--CccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCC
Confidence 67788888888999999999974 36789999999986543 2344433 3567789999999999999999999998
Q ss_pred CCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEecc
Q psy8771 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWS 642 (904)
Q Consensus 563 g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~ 642 (904)
|.+.. ...... ..|.+|.++.+...+.+++.|+|.++.
T Consensus 173 g~s~~---~~~~~~-~~~~~P~~l~~~~~~~~sv~l~W~~p~-------------------------------------- 210 (368)
T 1fnf_A 173 HESTP---LRGRQK-TGLDSPTGIDFSDITANSFTVHWIAPR-------------------------------------- 210 (368)
T ss_dssp EECCC---EEEEEE-CCCCCCEEEEEESCCSSEEEEEEECCS--------------------------------------
T ss_pred CCCCC---eEeeec-CCCCCCCccEEEEccCCEEEEEEeCCC--------------------------------------
Confidence 86543 333222 245678889998888999999999873
Q ss_pred CCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCC
Q psy8771 643 KPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720 (904)
Q Consensus 643 ~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P 720 (904)
+.+.+|.|+|+..+.... ..........+.+.+|.|++.|.|+|+|+|..|.|..+. ....+ .| .+|
T Consensus 211 ------~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~~~-~~~~t---~p-~~P 279 (368)
T 1fnf_A 211 ------ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREESPLLI-GQQST---VS-DVP 279 (368)
T ss_dssp ------SCCSEEEEEEECSCCSSCCEEEEEETTCCEEEEESCCTTCEEEEEEEEEETTEECCCEE-EEEEC---CC-CSC
T ss_pred ------CCcCEEEEEEecCCCCCCccEEEeCCCcCEEEECCCCCCCEEEEEEEEEeCCccCCccc-ccccC---CC-CCC
Confidence 357888888887654322 233345667999999999999999999999998876542 22222 33 367
Q ss_pred CCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCC
Q psy8771 721 QNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIG 799 (904)
Q Consensus 721 ~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g 799 (904)
.++.+...+.+++.|+|+++.. .+.+|.|+|+..++... .....+. ..+.+++.+|++++.|.|+|+|.+..|
T Consensus 280 ~~l~~~~~~~~sv~l~W~~p~~-----~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~~~~G 353 (368)
T 1fnf_A 280 RDLEVVAATPTSLLISWDAPAV-----TVRYYRITYGETGGNSP-VQEFTVPGSKSTATISGLKPGVDYTITVYAVTGRG 353 (368)
T ss_dssp EEEEEEEEETTEEEEEEECCSS-----CCSEEEEEEEETTCCSC-CEEEEEETTCCEEEECSCCTTCCEEEEEEEECCCS
T ss_pred CeeEEEecCCCEEEEEeeCCCC-----ccceEEEEEEECCCCCc-cEEEEcCCCeeEEEecCCCCCCEEEEEEEEeCCCC
Confidence 8899988899999999999842 48899999998765432 2334455 888999999999999999999999999
Q ss_pred CCCCCC
Q psy8771 800 DGPSSY 805 (904)
Q Consensus 800 ~g~~s~ 805 (904)
.|++|.
T Consensus 354 ~g~~s~ 359 (368)
T 1fnf_A 354 DSPASS 359 (368)
T ss_dssp SSCCBC
T ss_pred cCcccC
Confidence 998875
No 10
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=100.00 E-value=3.2e-33 Score=302.96 Aligned_cols=261 Identities=18% Similarity=0.278 Sum_probs=205.2
Q ss_pred CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCC
Q psy8771 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVG 563 (904)
Q Consensus 484 ~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g 563 (904)
+|.++.+...+.+++.|+|+++. ++.+.+|.|+|+..+... ...........+.+.+.+|.|++.|.|+|+|.|..|
T Consensus 98 ~p~~l~~~~~~~~si~l~W~~~~--~~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g 174 (375)
T 3t1w_A 98 QLTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGI-PIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGG 174 (375)
T ss_dssp CCSCCEEECCCSSEEEEECCCCC--CTTEEEEEEEEEESSSCC-SCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTE
T ss_pred CCceEEEEecCCCeEEEEEECCC--CCCceEEEEEEEECCCCC-ceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCc
Confidence 37788998889999999999874 468999999999865431 112233446778899999999999999999999999
Q ss_pred CCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccC
Q psy8771 564 PGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSK 643 (904)
Q Consensus 564 ~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~ 643 (904)
.|..+. ..+.+ .|++|.++.+...+.+++.|+|.++.
T Consensus 175 ~s~~s~-~~~~t---~~~~p~~l~~~~~~~~si~l~W~~p~--------------------------------------- 211 (375)
T 3t1w_A 175 ESAPTT-LTQQT---AVPPPTDLRFTNIGPDTMRVTWAPPP--------------------------------------- 211 (375)
T ss_dssp ECCCEE-EEEEC---CCCCCEEEEEESCCSSCEEEEEECCS---------------------------------------
T ss_pred ccCCee-eeeec---CCCCCceeEEEecccCEEEEEEcCCC---------------------------------------
Confidence 877665 33334 44578999999889999999999973
Q ss_pred CCCCCCceeeEEEEEEeCCcccc-c-eEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCC
Q psy8771 644 PTHSGENIISYELYWNDTYAKAK-H-HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQ 721 (904)
Q Consensus 644 ~~~~~~~~~~y~v~~~~~~~~~~-~-~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~ 721 (904)
++.+.+|.|+|+..+.... . .........+.+.+|.|++.|.|+|+|+|..|.|.++ ...+.|. |. +|.
T Consensus 212 ----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~-~~~~~t~---p~-~P~ 282 (375)
T 3t1w_A 212 ----SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL-RGRQKTG---LD-SPT 282 (375)
T ss_dssp ----SCCCCEEEEEEEEGGGTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE-EEEEECC---CC-CCE
T ss_pred ----CCCccEEEEEEEeCCCCCCcEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEcCCCcCCce-eeEEecC---CC-CCC
Confidence 4568899999988764332 2 2333445899999999999999999999998887654 3344442 33 578
Q ss_pred CcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCC
Q psy8771 722 NVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGD 800 (904)
Q Consensus 722 ~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~ 800 (904)
++.+...+.+++.|+|++|. +.+.+|.|+|+..+.... .....+. ..+.++|.+|.|++.|.|+|+|.|..|.
T Consensus 283 ~l~~~~~~~~sv~l~W~~p~-----~~~~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~ 356 (375)
T 3t1w_A 283 GIDFSDITANSFTVHWIAPR-----ATITGYRIRHHPEHFSGR-PREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREE 356 (375)
T ss_dssp EEEEESCCSSCEEEEEECCS-----SCCSEEEEEEEETTCCSS-CEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred ccEeeeccCCEEEEEECCCC-----cceeeEEEEEEECCCCCc-ceeEEcCCCccEEEECCCCCCCEEEEEEEEECCCCC
Confidence 89999889999999999873 668999999998775222 2334444 8889999999999999999999999998
Q ss_pred CCCCC
Q psy8771 801 GPSSY 805 (904)
Q Consensus 801 g~~s~ 805 (904)
|++..
T Consensus 357 s~p~s 361 (375)
T 3t1w_A 357 SPLLI 361 (375)
T ss_dssp CCCEE
T ss_pred CCcee
Confidence 87643
No 11
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=100.00 E-value=8.9e-31 Score=285.69 Aligned_cols=363 Identities=20% Similarity=0.297 Sum_probs=255.7
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccccCC-----CCceee----cceEEEEeee--cCCeEE
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIELTP-----DDKLPV----GRNVLTLDRV--TESENY 171 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~~~-----~~~~~~----~~~~l~i~~l--~d~g~Y 171 (904)
+|.|.. +.+ ..+.+|++++|.|.+.|.|.|.|+|+|++ +..+.. ..|+.+ ..+.|.|.++ +|+|.|
T Consensus 1 ~P~i~~-~~~-~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 78 (389)
T 2jll_A 1 QPHIIQ-LKN-ETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRY 78 (389)
T ss_dssp CCEEEE-CCC-EEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEE
T ss_pred CCeEEe-cCc-eEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEE
Confidence 477776 445 78889999999999999999999999982 444433 345554 3568999999 699999
Q ss_pred EEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC------CCCeE
Q psy8771 172 TCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA------NTPYS 245 (904)
Q Consensus 172 ~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~------~~~~~ 245 (904)
+|.|.|..|..+..+.|.|... |.+.. ++..+.+ .....+.|.|...+.+. ..+.|...+. ...+.
T Consensus 79 ~C~a~n~~g~~~~~~~l~V~~~--P~~~~--~~~~~~~--~~g~~~~l~C~~~g~p~--~~i~W~~~g~~l~~~~~~~~~ 150 (389)
T 2jll_A 79 DCEAASRIGGHQKSMYLDIEYA--PKFIS--NQTIYYS--WEGNPINISCDVKSNPP--ASIHWRRDKLVLPAKNTTNLK 150 (389)
T ss_dssp EEEEECSSCEEEEEEEEEEEEE--EEECC--SCCEEEE--CTTCCEEEEECEEEESC--CEEEEEETTEESSCTTCTTEE
T ss_pred EEEEEeCCCCcceEEEEEEEeC--CEEec--CcceEEe--ccCCEEEEEEEEEecCC--CeEEEEECCccCCcccCceEE
Confidence 9999999999999999998832 22211 2222122 23344555554432222 2344443321 11233
Q ss_pred EeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCcee
Q psy8771 246 EISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQI 325 (904)
Q Consensus 246 ~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~ 325 (904)
.........+.|.++.+.+.|.|+|.|.|..|..... ..+.
T Consensus 151 ~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~--~~l~------------------------------------- 191 (389)
T 2jll_A 151 TYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQE--YILA------------------------------------- 191 (389)
T ss_dssp EEECSSCEEEEECCCSTTSSEEEEEEEEETTEEEEEE--EEEE-------------------------------------
T ss_pred EeccCCEEEEEECCCChhhCEEEEEEEEcCCCcEEEE--EEEE-------------------------------------
Confidence 3333445679999999999999999999987642100 0000
Q ss_pred eEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccc
Q psy8771 326 TAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLY 405 (904)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (904)
T Consensus 192 -------------------------------------------------------------------------------- 191 (389)
T 2jll_A 192 -------------------------------------------------------------------------------- 191 (389)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCC
Q psy8771 406 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAP 485 (904)
Q Consensus 406 ~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p 485 (904)
+ ..+|.+|
T Consensus 192 ---------------------------------------------------v---------------------~~~P~~P 199 (389)
T 2jll_A 192 ---------------------------------------------------L---------------------ADVPSSP 199 (389)
T ss_dssp ---------------------------------------------------E---------------------CCCCCCC
T ss_pred ---------------------------------------------------e---------------------cCCCCCC
Confidence 0 0123566
Q ss_pred CCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEEEeCCC
Q psy8771 486 RDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQAFTSVG 563 (904)
Q Consensus 486 ~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a~~~~g 563 (904)
.++.+.....+++.|+|.+|...++ ++.+|.|+|+..+. ..|..... .....+.|.+|.+++.|.|+|+|.|..|
T Consensus 200 ~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~---~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G 276 (389)
T 2jll_A 200 YGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVAS---EIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKG 276 (389)
T ss_dssp EEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTC---SCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSC
T ss_pred cceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCC---cccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCc
Confidence 6777778888899999998765544 78899999998764 34544433 3457799999999999999999999999
Q ss_pred CCCCCCcEEEecCCC-CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEecc
Q psy8771 564 PGPLSAPVLVKTQQG-VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWS 642 (904)
Q Consensus 564 ~~~~S~~~~~~t~~~-~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~ 642 (904)
.+.+|....+.+... +|.+| .+.....+.+++.|+|.++.+
T Consensus 277 ~~~~s~~~~~~t~~~~~p~~p-~~~~~~~~~~~v~l~W~~p~~------------------------------------- 318 (389)
T 2jll_A 277 QGDYSKIEIFQTLPVREPSPP-SIHGQPSSGKSFKLSITKQDD------------------------------------- 318 (389)
T ss_dssp BCCCCCCEEEECCCCCCCCCC-CEEEEEETTTEEEEEECCCCC-------------------------------------
T ss_pred cCCCCcceEEEecCCCCCCCC-ccccccCcCCEEEEEEECCCC-------------------------------------
Confidence 999998888888765 44444 576667788899999998764
Q ss_pred CCCCCCCceeeEEEEEEeCCccccc--eEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecC
Q psy8771 643 KPTHSGENIISYELYWNDTYAKAKH--HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 713 (904)
Q Consensus 643 ~~~~~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~ 713 (904)
.++.+.+|.|+|+..+...+. .........+.|.+|.|++.|.|+|+|+|..|.|.+|. +.++|.+
T Consensus 319 ----~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~~G~s~~s~-~~~~T~~ 386 (389)
T 2jll_A 319 ----GGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANRLGYSEPTV-YEFSMPP 386 (389)
T ss_dssp ----CSSCCCEEEEEEEC-----CCBCCEECTTCCEEEECSCCTTCEEEEEEEEEC-CCBCCCEE-EEEECCC
T ss_pred ----CCCcccEEEEEEEeCCCCcceeEeeccCCcceEEeCCcCCCCEEEEEEEEEcCCcCCCcee-eEecCCC
Confidence 566788899998886554442 23345567899999999999999999999999998884 5677754
No 12
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.97 E-value=3.1e-29 Score=273.44 Aligned_cols=336 Identities=18% Similarity=0.274 Sum_probs=246.3
Q ss_pred CCCCCcEEEeccCCceEEEEeCCCCC----------CCc-----------eecccccccccceEEEEeeeccCCeeeeee
Q psy8771 35 TAPRDVQVRPLSSSTMVIQWDEPETP----------NGQ-----------ITHPPTRAARSHARLAAQSVLRRGRLAHAV 93 (904)
Q Consensus 35 ~~p~~l~~~~~~~~s~~v~W~~~~~~----------~g~-----------i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 93 (904)
+....|.|...+.+...|.|.+..+. ++. ++...+...|.....|...+..+.....+.
T Consensus 15 G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~ 94 (389)
T 2jll_A 15 NGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMY 94 (389)
T ss_dssp TSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred CCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCcceEEE
Confidence 36677778877888899999876210 122 222334444555555555554443444455
Q ss_pred eeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC--ceee----cceEEEEeee--
Q psy8771 94 RQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD--KLPV----GRNVLTLDRV-- 165 (904)
Q Consensus 94 ~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~--~~~~----~~~~l~i~~l-- 165 (904)
+.| ..+|.|...+.. +.+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+.... ++.+ ....|.|.++
T Consensus 95 l~V-----~~~P~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~i~W~~~-g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~ 167 (389)
T 2jll_A 95 LDI-----EYAPKFISNQTI-YYSWEGNPINISCDVKSNPPASIHWRRD-KLVLPAKNTTNLKTYSTGRKMILEIAPTSD 167 (389)
T ss_dssp EEE-----EEEEEECCSCCE-EEECTTCCEEEEECEEEESCCEEEEEET-TEESSCTTCTTEEEEECSSCEEEEECCCST
T ss_pred EEE-----EeCCEEecCcce-EEeccCCEEEEEEEEEecCCCeEEEEEC-CccCCcccCceEEEeccCCEEEEEECCCCh
Confidence 554 467888776654 6889999999999999999999999999 66665432 4443 2457999999
Q ss_pred cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC----CccceEEEEEEEeCCCC
Q psy8771 166 TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP----SETLLYYVIQYKPKAAN 241 (904)
Q Consensus 166 ~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~----~~~~~~y~v~~~~~~~~ 241 (904)
+|+|.|+|.|.|..|.....+.|.+. ..|.+|.++.+......++.|+|..+ +.++..|.|+|+..+..
T Consensus 168 ~d~G~Y~C~a~N~~G~~~~~~~l~v~-------~~P~~P~~~~~~~~~~~~~~l~w~~p~~~~g~pi~~y~v~~~~~~~~ 240 (389)
T 2jll_A 168 NDFGRYNCTATNHIGTRFQEYILALA-------DVPSSPYGVKIIELSQTTAKVSFNKPDSHGGVPIHHYQVDVKEVASE 240 (389)
T ss_dssp TSSEEEEEEEEETTEEEEEEEEEEEC-------CCCCCCEEEEEEEECSSCEEEEEECCSCCTTSCEEEEEEEEEETTCS
T ss_pred hhCEEEEEEEEcCCCcEEEEEEEEec-------CCCCCCcceEEeeccCCEEEEEEeCCCCCCCcceEEEEEEEEECCCc
Confidence 69999999999999998888888887 88999999999999999999999976 34788999999987554
Q ss_pred CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCC
Q psy8771 242 TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETP 321 (904)
Q Consensus 242 ~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~ 321 (904)
.............+.|.+|.+++.|.|+|.|.|..|.+.++....+.+.+.
T Consensus 241 ~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~----------------------------- 291 (389)
T 2jll_A 241 IWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPV----------------------------- 291 (389)
T ss_dssp CCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCC-----------------------------
T ss_pred ccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCC-----------------------------
Confidence 333333334457899999999999999999999999876665544332211
Q ss_pred CceeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEE
Q psy8771 322 NGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSL 401 (904)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (904)
T Consensus 292 -------------------------------------------------------------------------------- 291 (389)
T 2jll_A 292 -------------------------------------------------------------------------------- 291 (389)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccccCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCC
Q psy8771 402 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEP 481 (904)
Q Consensus 402 ~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p 481 (904)
.+
T Consensus 292 ------------------------------------------------------------------------------~~ 293 (389)
T 2jll_A 292 ------------------------------------------------------------------------------RE 293 (389)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred ------------------------------------------------------------------------------CC
Confidence 12
Q ss_pred CCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceE--EEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771 482 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWE--TQVVDNNQLTTISDLTPHTIYTIRVQAF 559 (904)
Q Consensus 482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~L~p~t~Y~~~V~a~ 559 (904)
+.+|. +.+...+.+++.|+|.+|.+.++.+.+|.|+|+..+.. .|. ........++.+.+|.|++.|.|+|+|.
T Consensus 294 p~~p~-~~~~~~~~~~v~l~W~~p~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~ 369 (389)
T 2jll_A 294 PSPPS-IHGQPSSGKSFKLSITKQDDGGAPILEYIVKYRSKDKE---DQWLEKKVQGNKDHIILEHLQWTMGYEVQITAA 369 (389)
T ss_dssp CCCCC-EEEEEETTTEEEEEECCCCCCSSCCCEEEEEEEC--------CCBCCEECTTCCEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCc-cccccCcCCEEEEEEECCCCCCCcccEEEEEEEeCCCC---cceeEeeccCCcceEEeCCcCCCCEEEEEEEEE
Confidence 34453 55666788999999999887788999999999985532 232 2223566789999999999999999999
Q ss_pred eCCCCCCCCCcEEEecC
Q psy8771 560 TSVGPGPLSAPVLVKTQ 576 (904)
Q Consensus 560 ~~~g~~~~S~~~~~~t~ 576 (904)
|..|.|++|.. .+.|.
T Consensus 370 n~~G~s~~s~~-~~~T~ 385 (389)
T 2jll_A 370 NRLGYSEPTVY-EFSMP 385 (389)
T ss_dssp C-CCBCCCEEE-EEECC
T ss_pred cCCcCCCceee-EecCC
Confidence 99999988754 56653
No 13
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.97 E-value=2.4e-30 Score=282.35 Aligned_cols=360 Identities=14% Similarity=0.165 Sum_probs=188.2
Q ss_pred CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe---ecCceE--EEEcCCCCCCeEEEEEE
Q psy8771 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV---VDNNQL--TTISDLTPHTIYTIRVQ 557 (904)
Q Consensus 483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~L~p~t~Y~~~V~ 557 (904)
.+|.++.+...+ ..+.|+|+++.+.++.+. |.|+|+..+. ..|.... ....+. ++..+|.+++.|.|+|+
T Consensus 9 ~~P~nv~~~~~~-~~~~L~W~p~~~~~~~i~-Y~V~y~~~~~---~~W~~~~~c~~~~~~~~~~t~~~l~~~~~Y~~rV~ 83 (414)
T 3se4_A 9 KSPQKVEVDIID-DNFILRWNRSDESVGNVT-FSFDYQKTGM---DNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIR 83 (414)
T ss_dssp --CCCCCEEEET-TEEEEC----------CE-EEEEEEESSC---CCCEEEEEEEEESCSCEECCSSCCCTTSCEEEEEE
T ss_pred CCCceeEEEEEC-CceEEEEcCCCCCCCCeE-EEEEEEECCC---CCcEECcCccCCCCCEEECCcccccCCCcEEEEEE
Confidence 578999998876 568999999877666777 9999998642 4565431 122333 44457899999999999
Q ss_pred EEeCCCCCCCCCcEEEecCCC-CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccce
Q psy8771 558 AFTSVGPGPLSAPVLVKTQQG-VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETA 636 (904)
Q Consensus 558 a~~~~g~~~~S~~~~~~t~~~-~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~ 636 (904)
|.| .+.+.++....+.+... .+.+| .+.+... .+++.|+|. |...++.+
T Consensus 84 A~n-~~~S~~s~~~~~~~~~~~~~~pP-~v~~~~~-~~si~v~w~-P~~~~g~~-------------------------- 133 (414)
T 3se4_A 84 AEK-ENTSSWYEVDSFTPFRKAQIGPP-EVHLEAE-DKAIVIHIS-PGTKDSVM-------------------------- 133 (414)
T ss_dssp EEE-TTEEEEEECCCBCHHHHCCCCCC-EEEEEEC-SSCEEEEEE-CSSSSCTT--------------------------
T ss_pred Eee-CCcCCCEecCceeecccceeCCC-eEEEEEc-CCEEEEEEE-cCCCCCce--------------------------
Confidence 999 55554443333322211 22344 4776664 458999999 64311100
Q ss_pred EEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcC--CCCCCCCCCeeEEecCC
Q psy8771 637 VTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP--RGEGATTPPIPVRTKQY 714 (904)
Q Consensus 637 ~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~--~G~~~~s~~~~~~t~~~ 714 (904)
|. .++.+.+|+|.|+..+...... .......+.|.+|.|++.|.|+|+|+|. .|.|..|..+.+.|...
T Consensus 134 ----~~----~~~~~~~Y~v~y~~~~~~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~ 204 (414)
T 3se4_A 134 ----WA----LDGLSFTYSLVIWKNSSGVEER-IENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVE 204 (414)
T ss_dssp ----TG----GGGSSCEEEEEEEETTTCCEEE-EEEECSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSC
T ss_pred ----ee----eecCcEEEEEEEEECCCCceEE-EecCCcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccccc
Confidence 00 0245789999999887655422 3345678999999999999999999994 68888898888888887
Q ss_pred CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEc--------cCCCCccEEEEe-c-CcceEEec-CCC
Q psy8771 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVET--------GRSDSEASIVTL-K-NQTSFVLD-ELK 783 (904)
Q Consensus 715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~--------~~~~~~~~~~~~-~-~~~~~~i~-~L~ 783 (904)
.|..+|.++.+...+ .++.|+|+++. + ..+|.|+|+.. +...|.. .... . ..+.+.+. +|.
T Consensus 205 ~~~~~P~~v~~~~~~-~~~~l~W~pp~-----~-~~~Y~v~y~~~~~~~~~~~~~~~w~~-~~~~~~~~~~~~~~t~~l~ 276 (414)
T 3se4_A 205 NELPPPENIEVSVQN-QNYVLKWDYTY-----A-NMTFQVQWLHAFLKRNPGNHLYKWKQ-IPDCENVKTTQCVFPQNVF 276 (414)
T ss_dssp CSSCCCEEEEEEEET-TEEEEEEECSS-----S-SCEEEEEEEESGGGSCCCC--CCCCB-CSTTTTBSSSEEEEEGGGS
T ss_pred cccCCCCccEEEEec-CCeEEEECCCC-----C-CeEEEEEEEehhccccccccccCceE-CCCccCCCCCEEcCCcccc
Confidence 787789999988765 68999999973 1 23999999974 1111210 0000 1 45666675 699
Q ss_pred CCceEEEEEEEeeCCCCCCCCCcEEeecCCCCC-CC--Cc------cCCcceeeCCCCCc------eeeeeeee----cC
Q psy8771 784 KWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP-SE--VC------PTQNDFRKNKKTNG------SNFKGGYL----ND 844 (904)
Q Consensus 784 p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P-~~--v~------~~~~~W~~p~~~~~------~~~~~~~~----~~ 844 (904)
+++.|.|+|+|.|..|.|++|....|.|..+.+ ++ +. .+.+.|.+|...++ ++..|.+. +.
T Consensus 277 ~~~~Y~~rV~A~n~~g~s~~s~~~~~~t~~~~~~~pP~l~~~~~~~si~v~W~~P~~~~~~~~~~~~~~~Y~v~y~~~~~ 356 (414)
T 3se4_A 277 QKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPVFNIRSLSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTS 356 (414)
T ss_dssp CSSEEEEEEEEECSSSEEEECCCEEEETTCC-------------------------------------------------
T ss_pred cCccEEEEEEEecCCCcccccccccccchhccccCCCeEEEEECCCeEEEEEECCCCccccchhhcCCeEEEEEEEECCC
Confidence 999999999999999999999989998876632 33 21 12239998876553 55555543 11
Q ss_pred CceEEecCCCeeEEEEcCCCCCcEEEEEEEEEec----CCCCCCCCceEEecCCC
Q psy8771 845 PMRFDVSDGGALELNVTGLQPDTIYTIQVAALTR----KGDGDRSKPETIKTPGG 895 (904)
Q Consensus 845 ~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~n~----~G~g~~s~~~~~~t~~~ 895 (904)
..... .....+.+.|.+|+|++.|.|+|+|.+. .|.|.+|.++.++|..+
T Consensus 357 ~~~~~-~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~~~g~g~~S~~~~~~T~~~ 410 (414)
T 3se4_A 357 NAERK-IIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEKTKPG 410 (414)
T ss_dssp -------------------------------------------------------
T ss_pred CceEE-EEecCCeEEeCCCCCCCeEEEEEEEEecccccCCCCCCCCCEeEEeCCC
Confidence 11112 2356678999999999999999999983 58899999988887543
No 14
>3se4_A Interferon alpha/beta receptor 1; type I interferon signaling complex, extracellular space, IM system receptor; HET: NAG; 3.50A {Homo sapiens} PDB: 3se3_A*
Probab=99.97 E-value=3.7e-30 Score=280.79 Aligned_cols=314 Identities=16% Similarity=0.153 Sum_probs=161.0
Q ss_pred eeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCC-------Cceee
Q psy8771 442 FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPN-------GQITG 514 (904)
Q Consensus 442 ~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~-------~~i~~ 514 (904)
++..+|.+++.|.|+|+|.| .+.|.++....+......+..+|. +.+.... ++|.|+|. |...+ +.+.+
T Consensus 67 ~t~~~l~~~~~Y~~rV~A~n-~~~S~~s~~~~~~~~~~~~~~pP~-v~~~~~~-~si~v~w~-P~~~~g~~~~~~~~~~~ 142 (414)
T 3se4_A 67 FSSLKLNVYEEIKLRIRAEK-ENTSSWYEVDSFTPFRKAQIGPPE-VHLEAED-KAIVIHIS-PGTKDSVMWALDGLSFT 142 (414)
T ss_dssp CCSSCCCTTSCEEEEEEEEE-TTEEEEEECCCBCHHHHCCCCCCE-EEEEECS-SCEEEEEE-CSSSSCTTTGGGGSSCE
T ss_pred CCcccccCCCcEEEEEEEee-CCcCCCEecCceeecccceeCCCe-EEEEEcC-CEEEEEEE-cCCCCCceeeeecCcEE
Confidence 34457899999999999999 666655444444333334456664 7766554 69999999 65332 45789
Q ss_pred EEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeC--CCCCCCCCcEEEecCCCCC-CCCCCceEEec
Q psy8771 515 YKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTS--VGPGPLSAPVLVKTQQGVP-SQPRDLRAVDI 591 (904)
Q Consensus 515 Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~--~g~~~~S~~~~~~t~~~~p-~~p~~~~~~~~ 591 (904)
|+|.|+..++.. .+. .......+.|.+|.|++.|.|+|+|.|. .|.|.+|....+.|....| .+|.++.+...
T Consensus 143 Y~v~y~~~~~~~--~~~--~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~~~g~g~~S~~~~~~t~~~~~~~~P~~v~~~~~ 218 (414)
T 3se4_A 143 YSLVIWKNSSGV--EER--IENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQ 218 (414)
T ss_dssp EEEEEEETTTCC--EEE--EEEECSEEEECCCCTTCEEEEEEEEECTTTCCEEEECCCEEEECCSCCSSCCCEEEEEEEE
T ss_pred EEEEEEECCCCc--eEE--EecCCcEEEEcCCCCCCeEEEEEEEEeccCCCCCccCcccccccccccccCCCCccEEEEe
Confidence 999999876542 122 2345667999999999999999999994 6778889888888876554 57888988776
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeC--------Cc
Q psy8771 592 QETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDT--------YA 663 (904)
Q Consensus 592 ~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~--------~~ 663 (904)
+ .++.|+|.++.. ..+|.|+|+.. +.
T Consensus 219 ~-~~~~l~W~pp~~---------------------------------------------~~~Y~v~y~~~~~~~~~~~~~ 252 (414)
T 3se4_A 219 N-QNYVLKWDYTYA---------------------------------------------NMTFQVQWLHAFLKRNPGNHL 252 (414)
T ss_dssp T-TEEEEEEECSSS---------------------------------------------SCEEEEEEEESGGGSCCCC--
T ss_pred c-CCeEEEECCCCC---------------------------------------------CeEEEEEEEehhccccccccc
Confidence 4 678999998742 34899998863 12
Q ss_pred cccceEE---ecccceEEEe-CCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecC
Q psy8771 664 KAKHHRR---IGLVETYSLT-GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEP 739 (904)
Q Consensus 664 ~~~~~~~---~~~~~~~~l~-~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~ 739 (904)
..+.... ......+.|. +|.+++.|.|+|+|+|..|.|.+|....+.+....+..||. +++.. ..+++.|.|++
T Consensus 253 ~~w~~~~~~~~~~~~~~~~t~~l~~~~~Y~~rV~A~n~~g~s~~s~~~~~~t~~~~~~~pP~-l~~~~-~~~si~v~W~~ 330 (414)
T 3se4_A 253 YKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEIQAFLLPPV-FNIRS-LSDSFHIYIGA 330 (414)
T ss_dssp CCCCBCSTTTTBSSSEEEEEGGGSCSSEEEEEEEEECSSSEEEECCCEEEETTCC-------------------------
T ss_pred cCceECCCccCCCCCEEcCCcccccCccEEEEEEEecCCCcccccccccccchhccccCCCe-EEEEE-CCCeEEEEEEC
Confidence 2222111 1234567776 69999999999999999999999988999999988777887 88875 46899999999
Q ss_pred CCCCC----CCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEeeC----CCCCCCCCcEEeec
Q psy8771 740 PPVER----SNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTS----IGDGPSSYPITIRT 811 (904)
Q Consensus 740 ~~~~~----~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~----~g~g~~s~~~~~~t 811 (904)
|.... .++.+.+|+|.|+..+..... . .....+.++|.+|+|++.|.|+|+|.+. .|.|++|.++.++|
T Consensus 331 P~~~~~~~~~~~~~~~Y~v~y~~~~~~~~~-~--~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~~~g~g~~S~~~~~~T 407 (414)
T 3se4_A 331 PKQSGNTPVIQDYPLIYEIIFWENTSNAER-K--IIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVFSDAVCEKT 407 (414)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCccccchhhcCCeEEEEEEEECCCCceE-E--EEecCCeEEeCCCCCCCeEEEEEEEEecccccCCCCCCCCCEeEEe
Confidence 95321 124688999998876543221 1 1126678999999999999999999983 58999999999988
Q ss_pred CCC
Q psy8771 812 HED 814 (904)
Q Consensus 812 ~~~ 814 (904)
.++
T Consensus 408 ~~~ 410 (414)
T 3se4_A 408 KPG 410 (414)
T ss_dssp ---
T ss_pred CCC
Confidence 654
No 15
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.96 E-value=4.6e-29 Score=259.50 Aligned_cols=272 Identities=20% Similarity=0.270 Sum_probs=206.4
Q ss_pred CCCCCCeEEEe-----cCCceEEEEecCC--CCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEE
Q psy8771 482 GTAPRDVQVRP-----LSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTI 554 (904)
Q Consensus 482 ~~~p~~l~v~~-----~~~~~~~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~ 554 (904)
|..|.++.... .+.++|.|+|+++ .+.++.+.+|.|+|...... +.... . ....+.+|.|++.|.|
T Consensus 4 Ps~p~~~~~~~~~~~~~g~~sv~l~W~p~~~~~~~g~i~~Y~V~~~~~~~~----~~~~~-~--~~~~~~~l~p~t~Y~~ 76 (290)
T 3l5i_A 4 PSKAPSFWYKIDPSHTQGYRTVQLVWKTLPPFEANGKILDYEVTLTRWKSH----LQNYT-V--NATKLTVNLTNDRYLA 76 (290)
T ss_dssp CSSCCCEEEEEEECSSTTCEEEEEEECCCCHHHHCSCEEEEEEEEEETTSC----CEEEE-E--SSSEEEEEECSSCEEE
T ss_pred CCCCCceeEEecccccCCCceEEEEEccCCchhcCCceEeEEEEEEeCCcC----ceeEe-c--CCcEEEEEcCCceEEE
Confidence 34555665432 3468999999983 34678999999999987632 11111 1 2235788999999999
Q ss_pred EEEEEeCCCCCCCCCcEEEecCC-CCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeec
Q psy8771 555 RVQAFTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQ 633 (904)
Q Consensus 555 ~V~a~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~ 633 (904)
+|+|.|..|.|..+.. .+.+.. ..|.++.++.+...+ +++.|+|.++..
T Consensus 77 ~V~A~n~~G~s~~s~~-~~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~~---------------------------- 126 (290)
T 3l5i_A 77 TLTVRNLVGKSDAAVL-TIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPRE---------------------------- 126 (290)
T ss_dssp EEEEEESSCBCCCEEE-EECCTTCCCCCCCEEEEEEEET-TEEEEEEECCSS----------------------------
T ss_pred EEEEEcCCCCCCCceE-EeecccccCCCccceeEEEeCC-CeEEEEEeCCCC----------------------------
Confidence 9999999998765532 222211 244566778777754 699999998842
Q ss_pred cceEEEeccCCCCCCCceeeEEEEEEeCCccc-----cceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCee
Q psy8771 634 ETAVTLAWSKPTHSGENIISYELYWNDTYAKA-----KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIP 708 (904)
Q Consensus 634 ~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~-----~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~ 708 (904)
.+.+|.|+|+...... +..........+.+.+|.|++.|.|+|+|+|..|.|.. ..+.
T Consensus 127 ----------------~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~~-~~~~ 189 (290)
T 3l5i_A 127 ----------------SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGSP-ESIK 189 (290)
T ss_dssp ----------------CCCEEEEEEEEECSSSCCCCEEEEEETTCSEEECCSCCCTTCEEEEEEEEEETTEECCC-EEEE
T ss_pred ----------------CCCcEEEEEEECCCCCCCCcCeEEccCCCcceEEecCcCCccEEEEEEEEEeCCccccc-EEEE
Confidence 5888999888765543 22233334567888999999999999999999998874 4677
Q ss_pred EEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCce
Q psy8771 709 VRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTE 787 (904)
Q Consensus 709 ~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~ 787 (904)
+.|...+|..+| ++.+...+.+++.|+|++++.+..+|.+.+|.|+|+..++.. ....+. ..+.++|.+|.+++.
T Consensus 190 ~~t~~~~P~~~p-~~~~~~~~~~sv~l~W~~~~~~~~~g~i~~Y~v~~~~~~~~~---~~~~~~~~~~~~~~~~L~p~t~ 265 (290)
T 3l5i_A 190 AYLKQAPPSKGP-TVRTKKVGKNEAVLEWDQLPVDVQNGFIRNYTIFYRTIIGNE---TAVNVDSSHTEYTLSSLTSDTL 265 (290)
T ss_dssp EESSCCCCSSCC-CEEEEEECSSCEEEEECCCCHHHHSSCCCEEEEEEEETTSCC---EEEEEETTCSEEEECSCCTTCE
T ss_pred eEccccCCCCCC-eeeEeeccCCEEEEEEcCCChhccCCEEEEEEEEEEeCCCCe---EEEEeCCCceEEEeCCCCCCCE
Confidence 778888888666 688888899999999997655667899999999999876432 234445 888999999999999
Q ss_pred EEEEEEEeeCCCCCCCCCcEEeecC
Q psy8771 788 YRIWVLAGTSIGDGPSSYPITIRTH 812 (904)
Q Consensus 788 Y~~~V~a~~~~g~g~~s~~~~~~t~ 812 (904)
|.|+|+|.|..| |..|..+.|+|+
T Consensus 266 Y~~~V~A~n~~G-g~~s~~~~~~T~ 289 (290)
T 3l5i_A 266 YMVRMAAYTDEG-GKDGPEFTFTTP 289 (290)
T ss_dssp EEEEEEEEETTE-EEECCCEEEECC
T ss_pred EEEEEEEEeCCC-CCCCCceEeecC
Confidence 999999999999 888999999985
No 16
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.96 E-value=3.8e-28 Score=252.33 Aligned_cols=262 Identities=24% Similarity=0.383 Sum_probs=206.1
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQA 558 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a 558 (904)
.++.+|.+|.+...+.+++.|+|++| ++.+.+|.|+|+..... ..|..... .+.+++.+.+|.|++.|.|+|+|
T Consensus 19 ~~p~~P~~l~~~~~~~~sv~l~W~~p---~~~~~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 93 (290)
T 3r8q_A 19 PAIPAPTDLKFTQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEKT--GPMKEINLAPDSSSVVVSGLMVATKYEVSVYA 93 (290)
T ss_dssp -CCCCCEEEEEEEECSSCEEEEEECC---SSCCCEEEEEEEESSSS--SCCEEEEECTTCCEEEECSCCSSCEEEEEEEE
T ss_pred CCCCCCCceEEEECCCCEEEEEEeCC---CCCeeEEEEEEEeCCCC--CceEEEEcCCCccEEEeCCCCCCCEEEEEEEE
Confidence 55678999999999999999999997 36789999999987633 33444433 56788999999999999999999
Q ss_pred EeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEE
Q psy8771 559 FTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVT 638 (904)
Q Consensus 559 ~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~ 638 (904)
.|..|.+..+. ..+.+.. .|.+|.++.+...+.+++.|+|.++.
T Consensus 94 ~~~~g~s~~s~-~~~~t~~-~~~~P~~l~~~~~~~~sv~l~W~~p~---------------------------------- 137 (290)
T 3r8q_A 94 LKDTLTSRPAQ-GVVTTLE-NVSPPRRARVTDATETTITISWRTKT---------------------------------- 137 (290)
T ss_dssp EETTEECCCEE-EEEECCC-CCCCCEEEEEEEECSSCEEEEEECCS----------------------------------
T ss_pred EeCCCCCCCcc-eeEecCC-CCCCCceeEEEEcCCCeEEEEEeCCC----------------------------------
Confidence 99999887663 4455544 34778999999989999999999873
Q ss_pred EeccCCCCCCCceeeEEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC
Q psy8771 639 LAWSKPTHSGENIISYELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG 717 (904)
Q Consensus 639 l~w~~~~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~ 717 (904)
+.+.+|.|+|+..++... .........++.|.+|.|++.|.|+|+|+|..|.|.+. .+.+.|. |.
T Consensus 138 ----------~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~-~~~~~t~---p~ 203 (290)
T 3r8q_A 138 ----------ETITGFQVDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPV-VIDASTA---ID 203 (290)
T ss_dssp ----------CCCCEEEEEEEESSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCE-EEEEECC---CC
T ss_pred ----------CcccEEEEEEEECCCCcceEEecCCCccEEEECCCCCCCEEEEEEEEEeCCcccCCE-EEEecCC---CC
Confidence 358889999988765544 23344556799999999999999999999998886543 2334443 33
Q ss_pred CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT 796 (904)
Q Consensus 718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~ 796 (904)
+|.+|.+...+.+++.|+|++|. |.+.+|.|+|+..+...+. ...... ..+.+++.+|.|++.|.|+|+|.+
T Consensus 204 -~P~~l~~~~~~~~sv~l~W~~p~-----~~~~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~ 276 (290)
T 3r8q_A 204 -APSNLRFLATTPNSLLVSWQPPR-----ARITGYIIKYEKPGSPPRE-VVPRPRPGVTEATITGLEPGTEYTIYVIALK 276 (290)
T ss_dssp -CCEEEEEEEEETTEEEEEEECCS-----SCCCEEEEEEECTTSCCEE-CSSCCCTTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred -CCCccEEEeeCCCEEEEEEeCCC-----CcccEEEEEEEeCCCCcce-eEeccCCCccEEEECCCCCCCEEEEEEEEEe
Confidence 57899999889999999999984 4689999999987643321 111222 778999999999999999999999
Q ss_pred CCCCCCC
Q psy8771 797 SIGDGPS 803 (904)
Q Consensus 797 ~~g~g~~ 803 (904)
..|.|.+
T Consensus 277 ~~g~s~p 283 (290)
T 3r8q_A 277 NNQKSEP 283 (290)
T ss_dssp TTEECCC
T ss_pred CCCcCCc
Confidence 9988754
No 17
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.96 E-value=1.7e-27 Score=246.60 Aligned_cols=260 Identities=19% Similarity=0.283 Sum_probs=203.7
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE-eecCceEEEEcCCCCCCeEEEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ-VVDNNQLTTISDLTPHTIYTIRVQA 558 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~p~t~Y~~~V~a 558 (904)
.++.+|.++.+...+.+++.|+|+++. +.+.+|.|+|+..... ..|... ......++.+.+|.|++.|.|+|+|
T Consensus 13 ~~p~~P~~l~~~~~~~~sv~l~W~~~~---~~~~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 87 (283)
T 1tdq_A 13 PVIDGPTQILVRDVSDTVAFVEWTPPR---AKVDFILLKYGLVGGE--GGKTTFRLQPPLSQYSVQALRPGSRYEVSISA 87 (283)
T ss_dssp CSSCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEEEESSSS--CCCEEEEECTTCSEEEECSCCTTCEEEEEEEE
T ss_pred cCCCCCcEEEEEecCCCeEEEEEECCC---CceeEEEEEEEEecCC--CCcEEEEeCCCCCEEEecCCCCCCEEEEEEEE
Confidence 356789999999999999999999976 6789999999865432 223332 2366788999999999999999999
Q ss_pred EeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEE
Q psy8771 559 FTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVT 638 (904)
Q Consensus 559 ~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~ 638 (904)
.|..|.+.. ....+.+ .|.+|.++++...+.+++.|+|.++.
T Consensus 88 ~~~~g~s~~-~~~~~~t---~p~~P~~l~~~~~~~~sv~l~W~~p~---------------------------------- 129 (283)
T 1tdq_A 88 VRGTNESDA-SSTQFTT---EIDAPKNLRVGSRTATSLDLEWDNSE---------------------------------- 129 (283)
T ss_dssp EETTEECCC-EEEEEEC---CCCCCEEEEEEEECSSCEEEEEECCS----------------------------------
T ss_pred ECCCCCCCC-eeEEEEC---CCCCCCceEEEecCCCeEEEEecCCC----------------------------------
Confidence 998877642 2234444 56778999999989999999999873
Q ss_pred EeccCCCCCCCceeeEEEEEEeCCccccceE-Eecc---cceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCC
Q psy8771 639 LAWSKPTHSGENIISYELYWNDTYAKAKHHR-RIGL---VETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY 714 (904)
Q Consensus 639 l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~---~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~ 714 (904)
+.+.+|.|+|+..++...... .... ...+.|.+|.|++.|.|+|+|+|..|.|.+ ..+.+...
T Consensus 130 ----------~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~---~~~~~~t~ 196 (283)
T 1tdq_A 130 ----------AEAQEYKVVYSTLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIP---ATMNARTE 196 (283)
T ss_dssp ----------SCCSEEEEEEEETTCCCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECCC---EEEEEECC
T ss_pred ----------CCccEEEEEEEeCCCCcceEEECCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCcc---eEEEecCC
Confidence 358899999988766554233 3333 678999999999999999999999887643 33333332
Q ss_pred CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEE
Q psy8771 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVL 793 (904)
Q Consensus 715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~ 793 (904)
|. +|.++.+...+.+++.|+|+++ +|.+.+|.|+|+..++.. ....+. ..+.+.|.+|.|++.|.|+|+
T Consensus 197 -~~-~P~~l~~~~~~~~sv~l~W~~p-----~~~i~~Y~v~~~~~~~~~---~~~~~~~~~~~~~i~~L~p~t~Y~~~V~ 266 (283)
T 1tdq_A 197 -LD-SPRDLMVTASSETSISLIWTKA-----SGPIDHYRITFTPSSGIS---SEVTVPRDRTSYTLTDLEPGAEYIISIT 266 (283)
T ss_dssp -CC-CCEEEEEEEECSSCEEEEEECC-----CSCCSEEEEEEECSSSCC---EEEEEESSCSEEEECCCCTTCCEEEEEE
T ss_pred -CC-CCCccEEeEecCCEEEEEEeCC-----CCcccEEEEEEEcCCCCe---eEEEeCCCccEEEECCCCCCCEEEEEEE
Confidence 32 5788999999999999999987 367899999999876432 334445 889999999999999999999
Q ss_pred EeeCCCCCCCCC
Q psy8771 794 AGTSIGDGPSSY 805 (904)
Q Consensus 794 a~~~~g~g~~s~ 805 (904)
|.+..|.|..+.
T Consensus 267 A~~~~g~s~~~~ 278 (283)
T 1tdq_A 267 AERGRQQSLEST 278 (283)
T ss_dssp EEETTEECCCEE
T ss_pred EEcCCCCCccee
Confidence 999988877654
No 18
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.96 E-value=2.7e-29 Score=299.07 Aligned_cols=329 Identities=19% Similarity=0.227 Sum_probs=198.8
Q ss_pred CCceeeeeccCCeEEEEEEEE-eeCCCC----CCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCcee
Q psy8771 439 TPGFGEQALYPNTLYYIWLAA-QSPRGE----GATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT 513 (904)
Q Consensus 439 ~~~~~~~~L~p~~~Y~~~v~a-~~~~g~----~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~ 513 (904)
...+.+.+|.|++.|.|+|+| .|..|. +..|....++|....| .+|.++.+...+.++|.|+|++|...+|.+.
T Consensus 548 ~~~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~P-s~P~~l~~~~~s~tsI~LsW~pP~~~nG~I~ 626 (897)
T 2dtg_E 548 HPGWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNP-SVPLDPISVSNSSSQIILKWKPPSDPNGNIT 626 (897)
T ss_dssp CCEEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCC-CCCEEEEEEECSSSCEEEEEECCCCSSSSCS
T ss_pred ccceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCC-cCCcceEEEeCCCCEEEEEEeCCCCCCCCee
Confidence 466889999999999999999 898887 6788888888887666 6999999999999999999999988889999
Q ss_pred eEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCC
Q psy8771 514 GYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQE 593 (904)
Q Consensus 514 ~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~ 593 (904)
+|.|+|+....... +. ........+|.|++.|.|+|.|.+..+.+..+......+....|..|..+. ...+.
T Consensus 627 ~Y~V~~~~~~~~~~--~~-----~~~~~~~~~l~p~t~Y~~~V~A~~~~~~s~~~~~~~~~~~~~~p~~p~~~~-~~~~~ 698 (897)
T 2dtg_E 627 HYLVFWERQAEDSE--LF-----ELDYCLKGLKLPSRTWSPPFESEDSQKHNQSEYEDSAGECCSCPKTDSQIL-KELEE 698 (897)
T ss_dssp EEECCEEEECCCCS--CT-----TCSSSCSCCCCCC--------------------------------------------
T ss_pred EEEEEEEECCCCcc--ce-----ecccccCCCcCCccccceeeecccccCcccccccccCCCccCCcCcccchh-hhhhh
Confidence 99999987654311 10 112223456899999999999999876543332222222222344444444 44567
Q ss_pred CeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeC---CccccceEE
Q psy8771 594 TAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDT---YAKAKHHRR 670 (904)
Q Consensus 594 ~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~---~~~~~~~~~ 670 (904)
+++.++|+.+.... +..++ | ....|.+.-... .........
T Consensus 699 ~s~~~~W~~~~~n~--v~~~~---------p-------------------------~~~r~~l~~~~n~t~~~~~~~~~~ 742 (897)
T 2dtg_E 699 SSFRKTFEDYLHNV--VFVPR---------P-------------------------SRKRRSLGDVGNAGNNEEHRPFEK 742 (897)
T ss_dssp -------------------------------------------------------------------------CCSCSCE
T ss_pred hheeeeEEEccCce--EEccC---------C-------------------------CcccccccccccccCccccceEEe
Confidence 78899998764200 00000 0 000000000000 000111122
Q ss_pred ecccceEEEeCCCCCcEEEEEEEEEcCCCCCCC---CCCeeEEecCC-CCCCCCCCcEEEecCCCEEEEEecCCCCCCCC
Q psy8771 671 IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGAT---TPPIPVRTKQY-VPGAPPQNVSCEPLSSTSIRISWEPPPVERSN 746 (904)
Q Consensus 671 ~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~---s~~~~~~t~~~-~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~ 746 (904)
....++++|.+|+|++.|.|+|+|+|..|.+.+ +..+.++|.+. .++.+|.++.+...+.++|.|+|++| ...+
T Consensus 743 ~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~~~~~~p~~P~~l~~~~~~~~sv~LsW~~P--~~~n 820 (897)
T 2dtg_E 743 VVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQEP--KEPN 820 (897)
T ss_dssp ECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCCCCCCCCCCCCCCCCSSSSSCCCCCCCCC--CSCS
T ss_pred cCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEeccCccCCCCCCcceEEEeCCCCEEEEEECCC--CCCC
Confidence 334579999999999999999999999998764 55677888762 23346888999888999999999999 4678
Q ss_pred ccEEEEEEEEEEccCCCCccEEEEe--c-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771 747 GHIVYYKLQFVETGRSDSEASIVTL--K-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816 (904)
Q Consensus 747 g~~~~Y~v~~~~~~~~~~~~~~~~~--~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P 816 (904)
|.+.+|.|+|+..+.. +....... . ..+.++|.+|.|+ .|.|+|+|.+..|.|++|+++.++|.+.++
T Consensus 821 G~I~~Y~V~y~~~~~~-~~~~~~~~~~~~~~~~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v~~~T~~~p~ 891 (897)
T 2dtg_E 821 GLIVLYEVSYRRYGDE-ELHLCDTRKHFALERGCRLRGLSPG-NYSVRIRATSLAGNGSWTEPTYFYVTDYLD 891 (897)
T ss_dssp SCEEEECCCCBSSSBC-CCCCCCCSSSCCCTTCCCCCSCCSS-EECCCCCEEETTBCCCCCCCCEECCCCCC-
T ss_pred CCEEEEEEEEEECCCc-ceEEEEeeeeecccCcEEECCCCCC-cEEEEEEEEeCCcccCCCCCEEEEeCCCCC
Confidence 9999999999876642 11111111 2 6778999999999 699999999999999999999999987654
No 19
>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E
Probab=99.96 E-value=2.6e-29 Score=299.17 Aligned_cols=363 Identities=18% Similarity=0.231 Sum_probs=215.7
Q ss_pred CCCCCeEEEecCCceEEEEecCCCCCC-CceeeEEEEEEeCCCC-----------CCcceEEEeec-----------Cce
Q psy8771 483 TAPRDVQVRPLSSSTMVIQWDEPETPN-GQITGYKVYYTQDQSL-----------PMSAWETQVVD-----------NNQ 539 (904)
Q Consensus 483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~-~~i~~Y~v~~~~~~~~-----------~~~~~~~~~~~-----------~~~ 539 (904)
..|.++.+..++++++.|+|++|...+ +.+.+|.|+|+..... ....|...... ..+
T Consensus 470 ~~~~~l~v~~~s~~sv~LsW~~p~~~~~~~i~gY~V~y~~~~~~n~t~~~~~~~c~~~~w~~~~~~~~~~~~~~~~~~~~ 549 (897)
T 2dtg_E 470 NELLKFSYIRTSFDKILLRWEPYWPPDFRDLLGFMLFYKEAPYQNVTEFDGQDACGSNSWTVVDIDPPLRSNDPKSQNHP 549 (897)
T ss_dssp CCBCCCSEEEECSSCEEEECCCCCSSSCCCEEEECCCSSSCCTTTCCCCCCCCCSCCCCCCCCCSCCEEEECCCCSSSCC
T ss_pred cceeEEEEEEEecCeEEEEecCCCCCCCceeeeEEEEEEeCCCCCcccccCccccCCCcceEEecCCCcccccccccccc
Confidence 356788999999999999999987544 5899999999875210 11345443221 257
Q ss_pred EEEEcCCCCCCeEEEEEEE-EeCCCC----CCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEE
Q psy8771 540 LTTISDLTPHTIYTIRVQA-FTSVGP----GPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYE 614 (904)
Q Consensus 540 ~~~~~~L~p~t~Y~~~V~a-~~~~g~----~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~ 614 (904)
.+.+.+|.|++.|.|+|+| +|..|. |.+|..+.++|...+|.+|.++.+...+.+++.|+|.+|..
T Consensus 550 ~~~l~~L~P~T~Y~~~V~A~~n~~G~~~~~~~~S~~v~~~T~~~~Ps~P~~l~~~~~s~tsI~LsW~pP~~--------- 620 (897)
T 2dtg_E 550 GWLMRGLKPWTQYAIFVKTLVTFSDERRTYGAKSDIIYVQTDATNPSVPLDPISVSNSSSQIILKWKPPSD--------- 620 (897)
T ss_dssp EEEECSCCSSCBCCBEEEECCCCCSSCCCCCCBCCCBCCBCCCCCCCCCEEEEEEECSSSCEEEEEECCCC---------
T ss_pred ceEeCCCCCCcEEEEEEEEEEeccCCccccCCccceEEEECCCCCCcCCcceEEEeCCCCEEEEEEeCCCC---------
Confidence 7999999999999999999 898887 78898899999999999999999999999999999999976
Q ss_pred EEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEE
Q psy8771 615 LYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAA 694 (904)
Q Consensus 615 v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a 694 (904)
.++.+.+|.|+|+......... ........+|.|++.|.|+|.|
T Consensus 621 --------------------------------~nG~I~~Y~V~~~~~~~~~~~~----~~~~~~~~~l~p~t~Y~~~V~A 664 (897)
T 2dtg_E 621 --------------------------------PNGNITHYLVFWERQAEDSELF----ELDYCLKGLKLPSRTWSPPFES 664 (897)
T ss_dssp --------------------------------SSSSCSEEECCEEEECCCCSCT----TCSSSCSCCCCCC---------
T ss_pred --------------------------------CCCCeeEEEEEEEECCCCccce----ecccccCCCcCCccccceeeec
Confidence 4566778888777654432211 1112223558999999999999
Q ss_pred EcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEE-------EEEEEEc---cCCCC
Q psy8771 695 QSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYY-------KLQFVET---GRSDS 764 (904)
Q Consensus 695 ~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y-------~v~~~~~---~~~~~ 764 (904)
.+..+.+..+......+....|..+ ..+. ...+.+++.++|+.+.. +. +..+ .+.-... .....
T Consensus 665 ~~~~~~s~~~~~~~~~~~~~~p~~p-~~~~-~~~~~~s~~~~W~~~~~---n~-v~~~~p~~~r~~l~~~~n~t~~~~~~ 738 (897)
T 2dtg_E 665 EDSQKHNQSEYEDSAGECCSCPKTD-SQIL-KELEESSFRKTFEDYLH---NV-VFVPRPSRKRRSLGDVGNAGNNEEHR 738 (897)
T ss_dssp -----------------------------------------------------------------------------CCS
T ss_pred ccccCcccccccccCCCccCCcCcc-cchh-hhhhhhheeeeEEEccC---ce-EEccCCCcccccccccccccCccccc
Confidence 9987655443222222222334433 3343 45578899999998732 11 1111 1100000 00001
Q ss_pred ccEEEEecCcceEEecCCCCCceEEEEEEEeeCCCCCCC---CCcEEeecCC-----CCCCCCcc-------CCcceeeC
Q psy8771 765 EASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGDGPS---SYPITIRTHE-----DDPSEVCP-------TQNDFRKN 829 (904)
Q Consensus 765 ~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~---s~~~~~~t~~-----~~P~~v~~-------~~~~W~~p 829 (904)
........+.++|.+|.|++.|.|+|+|.|..|.+.. +..+.++|.+ .+|..+.. +.++|++|
T Consensus 739 --~~~~~~~~t~~~i~gL~p~t~Y~~~V~A~n~~G~g~~~s~s~~v~~~T~~~~~~p~~P~~l~~~~~~~~sv~LsW~~P 816 (897)
T 2dtg_E 739 --PFEKVVNKESLVISGLRHFTGYRIELQACNQDTPEERCSVAAYVSARTMPEAKADDIVGPVTHEIFENNVVHLMWQEP 816 (897)
T ss_dssp --CSCEECSCSEEEECSSCSSCEEEECCEEESCSSSSCCBCCCCCEEEECCCCCCCCCCCCCCCCCSSSSSCCCCCCCCC
T ss_pred --eEEecCCceEEEECCCCCCcEEEEEEEEEeCCCCCCCCCCCceeEEeccCccCCCCCCcceEEEeCCCCEEEEEECCC
Confidence 1111225689999999999999999999999998764 5667888875 23333222 23399999
Q ss_pred CCCCceeeeeeeecCCc---e-EEec----CCCeeEEEEcCCCCCcEEEEEEEEEecCCCCCCCCceEEecCCCCCCC
Q psy8771 830 KKTNGSNFKGGYLNDPM---R-FDVS----DGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPETIKTPGGVPNR 899 (904)
Q Consensus 830 ~~~~~~~~~~~~~~~~~---~-~~~~----~~~~~~~~i~~L~p~t~Y~~~v~a~n~~G~g~~s~~~~~~t~~~~p~~ 899 (904)
...+|.|..|.+..... . .... ....+.+.+.+|.|| +|.|+|+|.|.+|.|++|.++.+.|...++.+
T Consensus 817 ~~~nG~I~~Y~V~y~~~~~~~~~~~~~~~~~~~~~~~~l~~L~pg-tY~~rV~A~n~~G~G~~S~~v~~~T~~~p~~p 893 (897)
T 2dtg_E 817 KEPNGLIVLYEVSYRRYGDEELHLCDTRKHFALERGCRLRGLSPG-NYSVRIRATSLAGNGSWTEPTYFYVTDYLDVP 893 (897)
T ss_dssp CSCSSCEEEECCCCBSSSBCCCCCCCCSSSCCCTTCCCCCSCCSS-EECCCCCEEETTBCCCCCCCCEECCCCCC---
T ss_pred CCCCCCEEEEEEEEEECCCcceEEEEeeeeecccCcEEECCCCCC-cEEEEEEEEeCCcccCCCCCEEEEeCCCCCCC
Confidence 88899887766532211 1 1111 346678999999999 69999999999999999999999998754443
No 20
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=99.95 E-value=3.6e-25 Score=229.14 Aligned_cols=260 Identities=22% Similarity=0.360 Sum_probs=197.7
Q ss_pred CCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE-eecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771 199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE-ISGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277 (904)
Q Consensus 199 ~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g 277 (904)
++|.+|.++++...+.+++.|+|+++.+.+.+|.|+|+.......+.. ........+.|.+|.|++.|.|+|+|.|..|
T Consensus 13 ~~p~~P~~l~~~~~~~~sv~l~W~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g 92 (283)
T 1tdq_A 13 PVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGLVGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVSISAVRGTN 92 (283)
T ss_dssp CSSCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEESSSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTE
T ss_pred cCCCCCcEEEEEecCCCeEEEEEECCCCceeEEEEEEEEecCCCCcEEEEeCCCCCEEEecCCCCCCEEEEEEEEECCCC
Confidence 788999999999999999999999998789999999976543333322 2344567888899999999999999888655
Q ss_pred CCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEEE
Q psy8771 278 RGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQ 357 (904)
Q Consensus 278 ~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~ 357 (904)
.+.+ ...
T Consensus 93 ~s~~---~~~---------------------------------------------------------------------- 99 (283)
T 1tdq_A 93 ESDA---SST---------------------------------------------------------------------- 99 (283)
T ss_dssp ECCC---EEE----------------------------------------------------------------------
T ss_pred CCCC---eeE----------------------------------------------------------------------
Confidence 4311 000
Q ss_pred cCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcEEEEEEeeecCCCCCCCCCCcceEeeccC
Q psy8771 358 SPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYG 437 (904)
Q Consensus 358 ~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 437 (904)
T Consensus 100 -------------------------------------------------------------------------------- 99 (283)
T 1tdq_A 100 -------------------------------------------------------------------------------- 99 (283)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEE
Q psy8771 438 KTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKV 517 (904)
Q Consensus 438 ~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v 517 (904)
.+. .++.+|.++.+...+.+++.|+|++|. +.+.+|.|
T Consensus 100 -----------------------------------~~~----t~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v 137 (283)
T 1tdq_A 100 -----------------------------------QFT----TEIDAPKNLRVGSRTATSLDLEWDNSE---AEAQEYKV 137 (283)
T ss_dssp -----------------------------------EEE----CCCCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEE
T ss_pred -----------------------------------EEE----CCCCCCCceEEEecCCCeEEEEecCCC---CCccEEEE
Confidence 000 124567889998889999999999975 57899999
Q ss_pred EEEeCCCCCCcceEEE-eecC---ceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCC
Q psy8771 518 YYTQDQSLPMSAWETQ-VVDN---NQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQE 593 (904)
Q Consensus 518 ~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~ 593 (904)
+|+..++. .+... .... ...+.+.+|.|++.|.|+|+|.|..|.+. ...+.+.. .|.+|.++.+...+.
T Consensus 138 ~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~---~~~~~~~t-~~~~P~~l~~~~~~~ 210 (283)
T 1tdq_A 138 VYSTLAGE---QYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSI---PATMNART-ELDSPRDLMVTASSE 210 (283)
T ss_dssp EEEETTCC---CCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECC---CEEEEEEC-CCCCCEEEEEEEECS
T ss_pred EEEeCCCC---cceEEECCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCc---ceEEEecC-CCCCCCccEEeEecC
Confidence 99987643 23222 3344 78899999999999999999999887653 33333333 445788899988888
Q ss_pred CeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecc
Q psy8771 594 TAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGL 673 (904)
Q Consensus 594 ~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~ 673 (904)
+++.|+|.++. +.+.+|.|+|+..++..........
T Consensus 211 ~sv~l~W~~p~--------------------------------------------~~i~~Y~v~~~~~~~~~~~~~~~~~ 246 (283)
T 1tdq_A 211 TSISLIWTKAS--------------------------------------------GPIDHYRITFTPSSGISSEVTVPRD 246 (283)
T ss_dssp SCEEEEEECCC--------------------------------------------SCCSEEEEEEECSSSCCEEEEEESS
T ss_pred CEEEEEEeCCC--------------------------------------------CcccEEEEEEEcCCCCeeEEEeCCC
Confidence 99999998863 4578888888877654433444556
Q ss_pred cceEEEeCCCCCcEEEEEEEEEcCCCCCCCC
Q psy8771 674 VETYSLTGLYPNTLYYIWLAAQSPRGEGATT 704 (904)
Q Consensus 674 ~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s 704 (904)
...+.|.+|.|++.|.|+|+|++..|.|.++
T Consensus 247 ~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~~~ 277 (283)
T 1tdq_A 247 RTSYTLTDLEPGAEYIISITAERGRQQSLES 277 (283)
T ss_dssp CSEEEECCCCTTCCEEEEEEEEETTEECCCE
T ss_pred ccEEEECCCCCCCEEEEEEEEEcCCCCCcce
Confidence 6899999999999999999999999887665
No 21
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.95 E-value=9.3e-26 Score=235.58 Aligned_cols=266 Identities=17% Similarity=0.266 Sum_probs=196.7
Q ss_pred CCCCceEEecCCCeEEEEEEcc-------CCCCeEEEeeCCccccCCCCceee-c--ceEEEEeeec-CCeEEEEEEEec
Q psy8771 110 PPPALLEVMLDSPLNLSCVAVG-------SPMPFVKWRKGQNIELTPDDKLPV-G--RNVLTLDRVT-ESENYTCIAASV 178 (904)
Q Consensus 110 ~~~~~~~~~~g~~~~l~C~~~g-------~p~p~i~W~k~~~~~~~~~~~~~~-~--~~~l~i~~l~-d~g~Y~c~a~n~ 178 (904)
.|.+ ..+..|++++|.|.+.| .|.|.|.|+|+ |..+... ++.+ + ...|.|.++. ..|.|+|.|.|.
T Consensus 10 ~P~~-~~v~~G~~v~l~C~~~~~~~~~~~~p~p~i~W~~~-g~~i~~~-~~~~~~~~~~~L~i~~~~~~~g~Y~C~a~~~ 86 (303)
T 1i1r_A 10 SPES-PVVQLHSNFTAVCVLKEKCMDYFHVNANYIVWKTN-HFTIPKE-QYTIINRTASSVTFTDIASLNIQLTCNILTF 86 (303)
T ss_dssp ESSS-CEEETTCCEEEEEEECHHHHHHHTCCGGGEEEEET-TEECCGG-GCEEEETTEEEEEECSCCCSEEEEEEEEEET
T ss_pred ccCC-ceEeCCCCEEEEEEECCccccccCCChhheEEEEC-CEECChh-heeeeCCcEEEEEEcCcCCCceEEEEecccC
Confidence 4556 88999999999999996 48899999999 7777543 3332 2 3579999993 369999999884
Q ss_pred Ccce---EEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC--CccceEEEEEEEeCCCCCCeEEeecceec
Q psy8771 179 LGVI---ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP--SETLLYYVIQYKPKAANTPYSEISGIITT 253 (904)
Q Consensus 179 ~g~~---~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~ 253 (904)
|.. ...+.|.+. .+|.+|.++++...+.++++|+|.++ .+...+|.|+++..+..............
T Consensus 87 -g~~~~~~~~~~l~v~-------~~P~~P~~l~~~~~~~~~v~l~W~~~~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~ 158 (303)
T 1i1r_A 87 -GQLEQNVYGITIISG-------LPPEKPKNLSCIVNEGKKMRCEWDGGRETHLETNFTLKSEWATHKFADCKAKRDTPT 158 (303)
T ss_dssp -TTEEEEEEEEEEEEE-------CCCCCCEEEEEEEETTSCCEEEEECCSCCSSCCEEEEEEEETTEECCCEECCSSCTT
T ss_pred -CCcceEEEEEEEecc-------CCCCCCeeeEEEECCCCcEEEEccCCCCCCCCcCEEEEEEecCCCCccCCCcCCCce
Confidence 432 234556666 88999999999988889999999988 33457999999865322111112234457
Q ss_pred eEEEcCC-CCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEEe
Q psy8771 254 YYTVRNL-SPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRR 332 (904)
Q Consensus 254 ~~~i~~L-~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~ 332 (904)
.+.|.+| .+++.|.|+|.|.|..|.+.++ ...+..
T Consensus 159 ~~~i~~L~~p~t~Y~f~V~A~N~~G~~~s~-~~~~~~------------------------------------------- 194 (303)
T 1i1r_A 159 SCTVDYSTVYFVNIEVWVEAENALGKVTSD-HINFDP------------------------------------------- 194 (303)
T ss_dssp EEECSSCCCTTSCEEEEEEEEETTEEEECC-CEEECG-------------------------------------------
T ss_pred EEEECCcCcccccEEEEEEEEcCCCCcccC-CEEECH-------------------------------------------
Confidence 8999999 8999999999999998865311 111100
Q ss_pred eceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcEEEE
Q psy8771 333 IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYI 412 (904)
Q Consensus 333 ~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 412 (904)
T Consensus 195 -------------------------------------------------------------------------------- 194 (303)
T 1i1r_A 195 -------------------------------------------------------------------------------- 194 (303)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEe
Q psy8771 413 WLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRP 492 (904)
Q Consensus 413 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~ 492 (904)
....++.+|.++.+..
T Consensus 195 ----------------------------------------------------------------~~~~~p~pP~~~~v~~ 210 (303)
T 1i1r_A 195 ----------------------------------------------------------------VYKVKPNPPHNLSVIN 210 (303)
T ss_dssp ----------------------------------------------------------------GGGEECCCCEEEEEEC
T ss_pred ----------------------------------------------------------------HHeEecCCCcceEEEE
Confidence 0002346777787765
Q ss_pred c--CCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe----ecCceEEEEcCCCCCCeEEEEEEEEeCCCCCC
Q psy8771 493 L--SSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV----VDNNQLTTISDLTPHTIYTIRVQAFTSVGPGP 566 (904)
Q Consensus 493 ~--~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~----~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~ 566 (904)
. +.+++.|+|++|...++.+.+|.|+|+..+. ..|.... ....+.+.|.+|.|++.|.|+|+|.|..|.|.
T Consensus 211 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~y~~~~~---~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~ 287 (303)
T 1i1r_A 211 SEELSSILKLTWTNPSIKSVIILKYNIQYRTKDA---STWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGY 287 (303)
T ss_dssp CSSSSSCEEEEEECCGGGGTSCEEEEEEEEETTC---SSCEECCGGGGCSCCSEEEECSCCTTCEEEEEEEEEETTSCSC
T ss_pred ecCCCCEEEEEECCCCCCCcccEEEEEEEEeCCC---CCceEEccccCCCceeEEEeCCCCCCCEEEEEEEeccCCCCCC
Confidence 4 6789999999988777789999999998763 4576553 34567899999999999999999999999876
Q ss_pred CC---CcEEEecCC
Q psy8771 567 LS---APVLVKTQQ 577 (904)
Q Consensus 567 ~S---~~~~~~t~~ 577 (904)
+| ..+.++|.+
T Consensus 288 ~S~wS~~~~~~T~e 301 (303)
T 1i1r_A 288 WSDWSEEASGITYE 301 (303)
T ss_dssp CCCCCCCEEEECCC
T ss_pred cCCCCCccceeCCc
Confidence 55 566677654
No 22
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=99.94 E-value=1.2e-25 Score=233.50 Aligned_cols=250 Identities=21% Similarity=0.284 Sum_probs=194.5
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc-cceE-EecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA-KHHR-RIGLVETYSLTGLYPNTLYYIWLAAQSP 697 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~-~~~~-~~~~~~~~~l~~L~p~t~Y~v~V~a~~~ 697 (904)
.+++|.+|.+...+.+++.|+|.++ ++.+.+|.|+|+..+... +... ......++.|.+|.|++.|.|+|+|+|.
T Consensus 20 ~p~~P~~l~~~~~~~~sv~l~W~~p---~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 96 (290)
T 3r8q_A 20 AIPAPTDLKFTQVTPTSLSAQWTPP---NVQLTGYRVRVTPKEKTGPMKEINLAPDSSSVVVSGLMVATKYEVSVYALKD 96 (290)
T ss_dssp CCCCCEEEEEEEECSSCEEEEEECC---SSCCCEEEEEEEESSSSSCCEEEEECTTCCEEEECSCCSSCEEEEEEEEEET
T ss_pred CCCCCCceEEEECCCCEEEEEEeCC---CCCeeEEEEEEEeCCCCCceEEEEcCCCccEEEeCCCCCCCEEEEEEEEEeC
Confidence 5789999999999999999999996 468999999999876433 3222 3345679999999999999999999999
Q ss_pred CCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-Ccce
Q psy8771 698 RGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTS 776 (904)
Q Consensus 698 ~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~ 776 (904)
.|.|.++ ...+.|...+ .+|.++.+...+.+++.|+|+++ ++.+.+|.|+|+..++... ...... ..+.
T Consensus 97 ~g~s~~s-~~~~~t~~~~--~~P~~l~~~~~~~~sv~l~W~~p-----~~~~~~Y~v~~~~~~~~~~--~~~~~~~~~~~ 166 (290)
T 3r8q_A 97 TLTSRPA-QGVVTTLENV--SPPRRARVTDATETTITISWRTK-----TETITGFQVDAVPANGQTP--IQRTIKPDVRS 166 (290)
T ss_dssp TEECCCE-EEEEECCCCC--CCCEEEEEEEECSSCEEEEEECC-----SCCCCEEEEEEEESSSCCC--EEEEECTTCSE
T ss_pred CCCCCCc-ceeEecCCCC--CCCceeEEEEcCCCeEEEEEeCC-----CCcccEEEEEEEECCCCcc--eEEecCCCccE
Confidence 9988776 4556665543 36899999999999999999987 3568999999998765432 233344 7889
Q ss_pred EEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCCCCccC-------CcceeeCCC-CCceeeeeeeecCCceE
Q psy8771 777 FVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSEVCPT-------QNDFRKNKK-TNGSNFKGGYLNDPMRF 848 (904)
Q Consensus 777 ~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~~v~~~-------~~~W~~p~~-~~~~~~~~~~~~~~~~~ 848 (904)
+.|.+|.|++.|.|+|+|.|..|.|... .+.+.|.+.+|..+... .++|.+|.. ..+|.+.+...+.....
T Consensus 167 ~~i~~L~p~t~Y~~~V~A~n~~g~s~~~-~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~ 245 (290)
T 3r8q_A 167 YTITGLQPGTDYKIYLYTLNDNARSSPV-VIDASTAIDAPSNLRFLATTPNSLLVSWQPPRARITGYIIKYEKPGSPPRE 245 (290)
T ss_dssp EEECSCCTTCEEEEEEEEEETTEECCCE-EEEEECCCCCCEEEEEEEEETTEEEEEEECCSSCCCEEEEEEECTTSCCEE
T ss_pred EEECCCCCCCEEEEEEEEEeCCcccCCE-EEEecCCCCCCCccEEEeeCCCEEEEEEeCCCCcccEEEEEEEeCCCCcce
Confidence 9999999999999999999998887654 35567777766553322 239998753 45565555544443332
Q ss_pred E--ecCCCeeEEEEcCCCCCcEEEEEEEEEecCCCCC
Q psy8771 849 D--VSDGGALELNVTGLQPDTIYTIQVAALTRKGDGD 883 (904)
Q Consensus 849 ~--~~~~~~~~~~i~~L~p~t~Y~~~v~a~n~~G~g~ 883 (904)
. ......+++.+.+|.||+.|.|+|+|+|..|.|.
T Consensus 246 ~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~ 282 (290)
T 3r8q_A 246 VVPRPRPGVTEATITGLEPGTEYTIYVIALKNNQKSE 282 (290)
T ss_dssp CSSCCCTTCCEEEECSCCTTCEEEEEEEEEETTEECC
T ss_pred eEeccCCCccEEEECCCCCCCEEEEEEEEEeCCCcCC
Confidence 2 2346788999999999999999999999988773
No 23
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=99.94 E-value=1.5e-25 Score=232.84 Aligned_cols=225 Identities=16% Similarity=0.300 Sum_probs=176.5
Q ss_pred eeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEe
Q psy8771 442 FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQ 521 (904)
Q Consensus 442 ~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~ 521 (904)
..+.+|.|++.|.|+|.|.|..|.+..+. ..+.+....++.+|.++.+.... +++.|+|++|.. .+.+|.|+|+.
T Consensus 63 ~~~~~l~p~t~Y~~~V~A~n~~G~s~~s~-~~~~~~~~~~~~p~~~~~~~~~~-~si~l~W~~p~~---~i~~Y~v~~~~ 137 (290)
T 3l5i_A 63 TKLTVNLTNDRYLATLTVRNLVGKSDAAV-LTIPACDFQATHPVMDLKAFPKD-NMLWVEWTTPRE---SVKKYILEWCV 137 (290)
T ss_dssp SEEEEEECSSCEEEEEEEEESSCBCCCEE-EEECCTTCCCCCCCEEEEEEEET-TEEEEEEECCSS---CCCEEEEEEEE
T ss_pred cEEEEEcCCceEEEEEEEEcCCCCCCCce-EEeecccccCCCccceeEEEeCC-CeEEEEEeCCCC---CCCcEEEEEEE
Confidence 35788999999999999999999886552 22222222456677788877765 699999999764 68999999998
Q ss_pred CCCCCC--cceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEE
Q psy8771 522 DQSLPM--SAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLA 599 (904)
Q Consensus 522 ~~~~~~--~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~ 599 (904)
...... ..|..........+.+.+|.|++.|.|+|+|+|..|.|. +....+.+....|..|..+.+...+.+++.|+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g~g~-~~~~~~~t~~~~P~~~p~~~~~~~~~~sv~l~ 216 (290)
T 3l5i_A 138 LSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADGPGS-PESIKAYLKQAPPSKGPTVRTKKVGKNEAVLE 216 (290)
T ss_dssp ECSSSCCCCEEEEEETTCSEEECCSCCCTTCEEEEEEEEEETTEECC-CEEEEEESSCCCCSSCCCEEEEEECSSCEEEE
T ss_pred CCCCCCCCcCeEEccCCCcceEEecCcCCccEEEEEEEEEeCCcccc-cEEEEeEccccCCCCCCeeeEeeccCCEEEEE
Confidence 764322 346665556677788999999999999999999999886 45566678888887777888888899999999
Q ss_pred EeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEE
Q psy8771 600 WSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSL 679 (904)
Q Consensus 600 W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l 679 (904)
|.++.. ...++.+.+|.|+|+..++............+++|
T Consensus 217 W~~~~~---------------------------------------~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~ 257 (290)
T 3l5i_A 217 WDQLPV---------------------------------------DVQNGFIRNYTIFYRTIIGNETAVNVDSSHTEYTL 257 (290)
T ss_dssp ECCCCH---------------------------------------HHHSSCCCEEEEEEEETTSCCEEEEEETTCSEEEE
T ss_pred EcCCCh---------------------------------------hccCCEEEEEEEEEEeCCCCeEEEEeCCCceEEEe
Confidence 995421 11466789999999887655444444566789999
Q ss_pred eCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEec
Q psy8771 680 TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 712 (904)
Q Consensus 680 ~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~ 712 (904)
.+|.|++.|.|+|+|+|..| |..|..+.++|.
T Consensus 258 ~~L~p~t~Y~~~V~A~n~~G-g~~s~~~~~~T~ 289 (290)
T 3l5i_A 258 SSLTSDTLYMVRMAAYTDEG-GKDGPEFTFTTP 289 (290)
T ss_dssp CSCCTTCEEEEEEEEEETTE-EEECCCEEEECC
T ss_pred CCCCCCCEEEEEEEEEeCCC-CCCCCceEeecC
Confidence 99999999999999999999 888888988885
No 24
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.93 E-value=4.6e-24 Score=223.70 Aligned_cols=270 Identities=15% Similarity=0.191 Sum_probs=188.2
Q ss_pred CCceEEecCCCeEEEEEEccC-----CCCeEEEeeCCccccCCCCcee-ecc---eEEEEeee--cCCeEEEEEEEecCc
Q psy8771 112 PALLEVMLDSPLNLSCVAVGS-----PMPFVKWRKGQNIELTPDDKLP-VGR---NVLTLDRV--TESENYTCIAASVLG 180 (904)
Q Consensus 112 ~~~~~~~~g~~~~l~C~~~g~-----p~p~i~W~k~~~~~~~~~~~~~-~~~---~~l~i~~l--~d~g~Y~c~a~n~~g 180 (904)
.+ ..+..|++++|.|.+.|+ |.+.|.|+++ +..+..+.... .++ +.|.|.++ +|+|.|.|.+.+..+
T Consensus 8 ~~-~~v~~G~~v~l~C~~~~~~~~~~~~~~i~W~~~-g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~ 85 (313)
T 2d9q_B 8 SA-PIVHLGDPITASCIIKQNCSHLDPEPQILWRLG-AELQPGGRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSL 85 (313)
T ss_dssp SC-SEECTTCCEEEEECCCTTSCSSCSCSCCEEESS-SCBCTTCEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSE
T ss_pred CC-cEEcCCCCEEEEEEECCCCCCCCcccceEEEeC-CEECCccceEEEecCeEEEEEEEeccCCCccceEEeeecCCCc
Confidence 44 788999999999999998 6789999999 66665432221 222 67999999 588999999977666
Q ss_pred ceEEEEEEEEEeecCCCCCCCCCCcceEEEeec-CCeEEEEEeCC--CccceEEEEEEEeCCCC-----CCeEEee-cce
Q psy8771 181 VIETSTIVKVQCKYAPLLTLPVAPLDVKISEVT-ATSVRLDWTYP--SETLLYYVIQYKPKAAN-----TPYSEIS-GII 251 (904)
Q Consensus 181 ~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~-~~sv~l~W~~~--~~~~~~y~v~~~~~~~~-----~~~~~~~-~~~ 251 (904)
...+.+.|.+. .+|.+|.++.+...+ .++++|+|+++ ......|.|+++..+.. ..+.... ...
T Consensus 86 ~~~~~~~l~v~-------~~P~~P~~l~c~~~~~~~~~~~~W~~~~~~~~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~ 158 (313)
T 2d9q_B 86 QILDQVELRAG-------YPPAIPHNLSCLMNLTTSSLICQWEPGPETHLPTSFTLKSFKSRGNCQTQGDSILDCVPKDG 158 (313)
T ss_dssp EEEEEEEEEEC-------CCCCCCEEEEEEEETTTTEEEEEEECCSCCSSCCEEEEEEEECCTTSCSCCCCEEEECCCTT
T ss_pred eeEEEEEEccC-------CCCCCCccceeeECCCCccEEEEecCCCCCCCceeEEEEEEecCCCcccCCcccccCCCCCC
Confidence 66667778877 789999999988874 68999999988 23356799999865422 1222221 111
Q ss_pred eceEEE--cCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEE
Q psy8771 252 TTYYTV--RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKH 329 (904)
Q Consensus 252 ~~~~~i--~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~ 329 (904)
...+.+ .+|.+++.|.|+|.|.|..|.+. +....+.+
T Consensus 159 ~~~~~~~~~~L~~~~~Y~f~V~A~N~~G~~~-s~~~~~~~---------------------------------------- 197 (313)
T 2d9q_B 159 QSHCSIPRKHLLLYQNMGIWVQAENALGTSM-SPQLCLDP---------------------------------------- 197 (313)
T ss_dssp CSEEEEEGGGCCSSSCEEEEEEEEETTEEEE-CCCEEECG----------------------------------------
T ss_pred CcEEEECccccccceeEEEEEEEECCCCCcc-CccEEEeh----------------------------------------
Confidence 234444 45888888888888888877532 11111111
Q ss_pred EEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcE
Q psy8771 330 HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTL 409 (904)
Q Consensus 330 ~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (904)
T Consensus 198 -------------------------------------------------------------------------------- 197 (313)
T 2d9q_B 198 -------------------------------------------------------------------------------- 197 (313)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeE
Q psy8771 410 YYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQ 489 (904)
Q Consensus 410 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~ 489 (904)
....++.+|.++.
T Consensus 198 -------------------------------------------------------------------~~~~~p~pP~~~~ 210 (313)
T 2d9q_B 198 -------------------------------------------------------------------MDVVKLEPPMLRT 210 (313)
T ss_dssp -------------------------------------------------------------------GGGEECCCCEEEE
T ss_pred -------------------------------------------------------------------hheeccCcCceeE
Confidence 1112345677777
Q ss_pred EEec------CCceEEEEecCCCCCCCceeeEEEEEE-eCCCCCCcceEEEee--cCceEEEEcCCCCCCeEEEEEEEEe
Q psy8771 490 VRPL------SSSTMVIQWDEPETPNGQITGYKVYYT-QDQSLPMSAWETQVV--DNNQLTTISDLTPHTIYTIRVQAFT 560 (904)
Q Consensus 490 v~~~------~~~~~~l~W~~p~~~~~~i~~Y~v~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V~a~~ 560 (904)
+... ..+++.|+|++|...++.+.+|+|+|+ .... ..|..... ...+.+.+.+|.|++.|.|+|+|.|
T Consensus 211 ~~~~~~~~~~~~~~l~l~W~~p~~~~~~~l~Y~v~y~~~~~~---~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~rVra~~ 287 (313)
T 2d9q_B 211 MDPSPEAAPPQAGCLQLSWEPWQPGLHINQKCELRHKPQRGE---ASWALVGPLPLEALQYELCGLLPATAYTLQIRCIR 287 (313)
T ss_dssp CCC-------CCSCEEEEEECCGGGTTSCEEEEEEEEESSSC---CCCEEEEEECSCEEEEEECSCCSCCCEEEEEEEEE
T ss_pred EEEecccccCCCCeEEEEECCCCCCCceeEEEEEEEccCCCC---CCcEEcccccCcceEEEEeCCCCCCeEEEEEEeeE
Confidence 6654 468999999998654444689999999 4432 45765432 4567799999999999999999999
Q ss_pred CCCCCC---CCCcEEEecCCCCCC
Q psy8771 561 SVGPGP---LSAPVLVKTQQGVPS 581 (904)
Q Consensus 561 ~~g~~~---~S~~~~~~t~~~~p~ 581 (904)
..|.|. +|..+.+.|...+|.
T Consensus 288 ~~g~G~wS~wS~~~~~~T~~~~P~ 311 (313)
T 2d9q_B 288 WPLPGHWSDWSPSLELRTTERAAA 311 (313)
T ss_dssp CSSCCCCCCCCCCEEECCCC----
T ss_pred CCCCCccCCCCCccceeCCccCCC
Confidence 987775 667778888766553
No 25
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.92 E-value=5.7e-24 Score=220.40 Aligned_cols=277 Identities=15% Similarity=0.206 Sum_probs=187.1
Q ss_pred CCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe-e--cCceEEEEc--CCCCCCeEEEEE
Q psy8771 482 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV-V--DNNQLTTIS--DLTPHTIYTIRV 556 (904)
Q Consensus 482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~--~~~~~~~~~--~L~p~t~Y~~~V 556 (904)
..+|.+|.+...+ ..+.|+|++|.+.++.+. |.|+|+..+. ..|.... . ...+.+.+. +|.+++.|.|+|
T Consensus 4 l~~P~nv~~~~~n-~~~iL~W~pp~~~~~~v~-Y~V~y~~~~~---~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV 78 (306)
T 3s98_A 4 LKSPQKVEVDIID-DNFILRWNRSDESVGNVT-FSFDYQKTGM---DNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRI 78 (306)
T ss_dssp ----CCCEEEEET-TEEEEECC--------CE-EEEEEEESSC---SSCEECTTCSSBSSSEEECCC---CTTSCEEEEE
T ss_pred CCCCcEeEEEEEC-CeEEEEEcCCCCCCCCeE-EEEEEEECCC---CCcEECCCccCCCCCEEEccccccCCCCcEEEEE
Confidence 3578999998775 567899999876656665 9999998642 4565531 1 234455554 568999999999
Q ss_pred EEEeCCCCCCCCCcEEEecCCCC-CCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccc
Q psy8771 557 QAFTSVGPGPLSAPVLVKTQQGV-PSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQET 635 (904)
Q Consensus 557 ~a~~~~g~~~~S~~~~~~t~~~~-p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~ 635 (904)
+|.| .|.|++|....+.+.... +.+|. +.+.... ++|.|+|.++.. ++.+
T Consensus 79 ~A~n-~~~S~~s~~~~f~~~~~~~~~pP~-v~~~~~~-~si~v~w~P~~~-~~~~------------------------- 129 (306)
T 3s98_A 79 RAEK-ENTSSWYEVDSFTPFRKAQIGPPE-VHLEAED-KAIVIHISPGTK-DSVM------------------------- 129 (306)
T ss_dssp EEEC-SSCEEEEECCCBCHHHHCBCCCCE-EEEEECS-SCEEEEEECC----CCC-------------------------
T ss_pred EEEe-CCcCCCEeeeeEechhhCccCCCe-EEEEEcC-CEEEEEEECCCC-CCcc-------------------------
Confidence 9999 887777655556554333 34444 7777644 689999995532 1000
Q ss_pred eEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEc--CCCCCCCCCCeeEEecC
Q psy8771 636 AVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQS--PRGEGATTPPIPVRTKQ 713 (904)
Q Consensus 636 ~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~--~~G~~~~s~~~~~~t~~ 713 (904)
| ..++.+.+|.|.|+..+...... .......+.|.+|.|++.|.|+|+|++ ..|.|.+|..+.+.|..
T Consensus 130 -----~----~~~g~~l~Y~v~y~~~~~~~~~~-~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~ 199 (306)
T 3s98_A 130 -----W----ALDGLSFTYSLVIWKNSSGVEER-IENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTV 199 (306)
T ss_dssp -----C---------CCEEEEEEEETTTCCCEE-EEEECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCS
T ss_pred -----e----eccCCcEEEEEEEEECCCCCeEE-EecccceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecC
Confidence 0 01457889999999886654322 334567899999999999999999999 67899999999999998
Q ss_pred CCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEc--------cCCCCccEEEEe---c--CcceEEec
Q psy8771 714 YVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVET--------GRSDSEASIVTL---K--NQTSFVLD 780 (904)
Q Consensus 714 ~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~--------~~~~~~~~~~~~---~--~~~~~~i~ 780 (904)
..|..+|.++.+... .+++.|+|+++. .+ .+|.+.+... ++..| ..+ . ..+.+.+.
T Consensus 200 ~~p~~~P~~v~~~~~-~~s~~l~W~~p~---~~---~~~~v~~~~gy~~~~~~~~~~~W----~~~~~c~~~~~~~c~~~ 268 (306)
T 3s98_A 200 ENELPPPENIEVSVQ-NQNYVLKWDYTY---AN---MTFQVQWLHAFLKRNPGNHLYKW----KQIPDCENVKTTQCVFP 268 (306)
T ss_dssp CCSSCCCEEEEEEEE-TTEEEEEEECSS---SS---CEEEEEEEEGGGGSCC----CCC----EECGGGTTBSSSEEEEE
T ss_pred CCcCCCCceEEEEEe-cCEEEEEeCCCC---Cc---EEEEEEEehhhhhccccccccCc----eECCCceeCCCccccCc
Confidence 888888999999765 478999999873 22 2566666542 12222 222 1 56777787
Q ss_pred C-CCCCceEEEEEEEeeCCCCCCCCCcEEeecCC
Q psy8771 781 E-LKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813 (904)
Q Consensus 781 ~-L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~ 813 (904)
+ |.+...|.|||+|.|..|.|.+|+.+.|.|..
T Consensus 269 ~~~~~~~~Y~~RV~A~n~~~~s~~s~~~~~~~~~ 302 (306)
T 3s98_A 269 QNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEI 302 (306)
T ss_dssp GGGSCSSEEEEEEEEECSSCBCCCCCCEEEEC--
T ss_pred hhhcccCCEEEEEEEccCCCccccccccccCccc
Confidence 7 34555999999999999999999999998853
No 26
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.91 E-value=3.5e-23 Score=202.28 Aligned_cols=193 Identities=17% Similarity=0.243 Sum_probs=162.0
Q ss_pred cCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCc-cccc---eEEecccceEEEeCCCCCcEEEEEEEE
Q psy8771 619 DTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA-KAKH---HRRIGLVETYSLTGLYPNTLYYIWLAA 694 (904)
Q Consensus 619 ~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~-~~~~---~~~~~~~~~~~l~~L~p~t~Y~v~V~a 694 (904)
..|.+|.++.+.. +.+++.|+|.++..+++.+.+|.|+|+.... ..+. .........+.+ +|.|++.|.|+|+|
T Consensus 4 ~~P~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~~V~A 81 (205)
T 1cfb_A 4 DVPNAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTFRVIA 81 (205)
T ss_dssp CCCCCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEEEEEE
T ss_pred cCCCCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEEEEEE
Confidence 4678999999999 9999999999998778899999999987643 2231 122234567777 99999999999999
Q ss_pred EcCCCCCCCC-CCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-
Q psy8771 695 QSPRGEGATT-PPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK- 772 (904)
Q Consensus 695 ~~~~G~~~~s-~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~- 772 (904)
+|..|.|.+| ..+.++|.+..|..+|.++.+...+.+++.|+|++|.....||.+.+|.|+|+..+.... .....+.
T Consensus 82 ~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~ng~i~~Y~v~~~~~~~~~~-~~~~~~~~ 160 (205)
T 1cfb_A 82 FNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPEIEHNAPNFHYYVSWKRDIPAAA-WENNNIFD 160 (205)
T ss_dssp EETTEECCCCCCCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCGGGTCSSSCEEEEEEEESSTTCC-CEEEEECC
T ss_pred EECCccCCCCCCceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCccccCCCceEEEEEEEECCCCCC-cEEEEecC
Confidence 9999999988 568899999989888999999999999999999999654688999999999998775432 2223333
Q ss_pred -CcceEEecCCCCCceEEEEEEEeeCCCCCCC-CCcEEeecCCC
Q psy8771 773 -NQTSFVLDELKKWTEYRIWVLAGTSIGDGPS-SYPITIRTHED 814 (904)
Q Consensus 773 -~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~-s~~~~~~t~~~ 814 (904)
..+.++|.+|.+++.|.|+|+|.|..|.|++ |.++.++|.++
T Consensus 161 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~T~e~ 204 (205)
T 1cfb_A 161 WRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGYSGED 204 (205)
T ss_dssp TTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEESSSC
T ss_pred CCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEecCCC
Confidence 6789999999999999999999999999995 78899998765
No 27
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.91 E-value=1.7e-23 Score=208.96 Aligned_cols=220 Identities=20% Similarity=0.282 Sum_probs=165.6
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF 559 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~ 559 (904)
.|+.+|.++.+...+.+++.|+|++| ++.+.+|.|+|+...... ..+ .......+++.+.+|.|++.|.|+|+|+
T Consensus 4 ~p~~~P~~l~~~~~~~~si~l~W~~p---~g~i~~Y~v~~~~~~~~~-~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A~ 78 (234)
T 3f7q_A 4 MDLGAPQNPNAKAAGSRKIHFNWLPP---SGKPMGYRVKYWIQGDSE-SEA-HLLDSKVPSVELTNLYPYCDYEMKVCAY 78 (234)
T ss_dssp -CCCCCEEEEEEECSSSCEEEEEECC---SSCCCEEEEEEEETTSCG-GGC-EEEEESSSEEEECSCCTTCEEEEEEEEE
T ss_pred CCCCCCcceEEEEcCCCEEEEEEECC---CCccceEEEEEEECCCCc-cce-EEEcCCccEEEECCCCCCCEEEEEEEEE
Confidence 56789999999999999999999997 468899999999875432 222 3334677889999999999999999999
Q ss_pred eCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEE
Q psy8771 560 TSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTL 639 (904)
Q Consensus 560 ~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l 639 (904)
|..|.|.+|..+.+.|....|.+|.++.+...+.+++.|+|.++..
T Consensus 79 n~~G~g~~s~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~---------------------------------- 124 (234)
T 3f7q_A 79 GAQGEGPYSSLVSCRTHQEVPSEPGRLAFNVVSSTVTQLSWAEPAE---------------------------------- 124 (234)
T ss_dssp ETTEECCCCCCEEEECCCCCCCCCCCCEEEECSSSCEEEECCCCSC----------------------------------
T ss_pred eCCCcCCCCCeEEEEcCCCCCCCCCccEEEEecCCEEEEEEcCCCC----------------------------------
Confidence 9999999999999999998999999999999999999999999865
Q ss_pred eccCCCCCCCceeeEEEEEEeCCccccc-------eEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCC-CeeEEe
Q psy8771 640 AWSKPTHSGENIISYELYWNDTYAKAKH-------HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTP-PIPVRT 711 (904)
Q Consensus 640 ~w~~~~~~~~~~~~y~v~~~~~~~~~~~-------~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~-~~~~~t 711 (904)
.++.+.+|.|+|+..+..... .........+.|.+|+|++.|.|+|+|+|..|.|.+|. .+.++|
T Consensus 125 -------~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T 197 (234)
T 3f7q_A 125 -------TNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPKNRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLAT 197 (234)
T ss_dssp -------CSSCCCEEEEEEEEBCTTSCBSSCCEECCCSCTTCCEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGG
T ss_pred -------CCCceeEEEEEEEECCCCCCccCcceEEEecCCcceEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeec
Confidence 566788888888876544321 11123346899999999999999999999999999886 478889
Q ss_pred cCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEE
Q psy8771 712 KQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758 (904)
Q Consensus 712 ~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~ 758 (904)
.+..|..+|....+..+.. ..+..+++|.+++++
T Consensus 198 ~~~~P~~~P~~~~~~i~~~-------------~~g~~~~~~~~~~~~ 231 (234)
T 3f7q_A 198 QPKRPMSIPIIPDIPIVDA-------------QSGEDYDSFLMYSDD 231 (234)
T ss_dssp SCCCCCCCCCCTTCCEEET-------------TC-------------
T ss_pred CCCCCCCCccccceeeEEc-------------ccCcchheeeeehhh
Confidence 8888887776444322211 233468889888765
No 28
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.90 E-value=7.5e-23 Score=201.00 Aligned_cols=193 Identities=22% Similarity=0.363 Sum_probs=160.5
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCC----CCceeeEEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEE
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHS----GENIISYELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAA 694 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~----~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a 694 (904)
++.+|.++.+...+.+++.|+|.++... ++.+.+|.|+|+..+.... .........++.|.+|+|++.|.|+|+|
T Consensus 4 P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 83 (211)
T 3p4l_A 4 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMV 83 (211)
T ss_dssp CCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC---CCCEEEEESSSEEEECSCCTTCEEEEEEEE
T ss_pred CCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCcceEEEeCCCceEEEecCcCCCCEEEEEEEE
Confidence 4568999999999999999999987533 5789999999998765543 2333455679999999999999999999
Q ss_pred EcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEec--CCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCC-ccEEEEe
Q psy8771 695 QSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL--SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDS-EASIVTL 771 (904)
Q Consensus 695 ~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~--~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~-~~~~~~~ 771 (904)
+|..|.|.+|..+.+.|.+..|..+|.++.+... +.+++.|+|++| ...+|.+.+|.|+|+..+.... ......+
T Consensus 84 ~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~ 161 (211)
T 3p4l_A 84 TKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPP--SEANGKITGYIIYYSTDVNAEIHDWVIEPV 161 (211)
T ss_dssp EETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECC--TTCCSCCCEEEEEEESCTTSCGGGSEEEEE
T ss_pred EcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCC--CCCCCCEEEEEEEEEECCCCCCCceEEEEe
Confidence 9999999999999999999988878999999877 478999999998 4578999999999997654322 2233344
Q ss_pred c-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771 772 K-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814 (904)
Q Consensus 772 ~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~ 814 (904)
. ..+.++|.+|.|++.|.|+|+|.|..|.|++|+++.+.+...
T Consensus 162 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v~~~~~~~ 205 (211)
T 3p4l_A 162 VGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTPKA 205 (211)
T ss_dssp ESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCEEEECC--
T ss_pred cCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEccCccc
Confidence 4 889999999999999999999999999999999999988653
No 29
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=99.90 E-value=2.4e-22 Score=197.37 Aligned_cols=193 Identities=21% Similarity=0.342 Sum_probs=156.8
Q ss_pred CCCCCCCCCeEEEecCCceEEEEecCCCCC----CCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEE
Q psy8771 479 YEPGTAPRDVQVRPLSSSTMVIQWDEPETP----NGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTI 554 (904)
Q Consensus 479 ~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~ 554 (904)
+.|+.+|.++.+...+.+++.|+|++|... ++.+.+|.|+|+..+... ..+. ......+++.+.+|.|++.|.|
T Consensus 2 d~P~~~P~~l~~~~~~~~si~l~W~~p~~~~~~~~~~i~~Y~v~~~~~~~~~-~~~~-~~~~~~~~~~i~~L~p~t~Y~~ 79 (211)
T 3p4l_A 2 DLPMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPAN-TKYK-NANATTLSYLVTGLKPNTLYEF 79 (211)
T ss_dssp -CCCCCCEEEEEEECSSSCEEEEEECTTSCTTCCCCSSCEEEEEEEECC----CCCE-EEEESSSEEEECSCCTTCEEEE
T ss_pred CCCCCCCCCEEEEecCCCeEEEEEeCCCCCcccccCCCcEEEEEEEECCCCc-ceEE-EeCCCceEEEecCcCCCCEEEE
Confidence 467889999999999999999999997533 568899999999876432 2222 2346677899999999999999
Q ss_pred EEEEEeCCCCCCCCCcEEEecCCCCCC-CCCCceEEec--CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEe
Q psy8771 555 RVQAFTSVGPGPLSAPVLVKTQQGVPS-QPRDLRAVDI--QETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVD 631 (904)
Q Consensus 555 ~V~a~~~~g~~~~S~~~~~~t~~~~p~-~p~~~~~~~~--~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~ 631 (904)
+|+|+|..|.|.+|..+.+.|....|. +|.++.+... +.+++.|+|.++..
T Consensus 80 ~V~A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~-------------------------- 133 (211)
T 3p4l_A 80 SVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSE-------------------------- 133 (211)
T ss_dssp EEEEEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTT--------------------------
T ss_pred EEEEEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCC--------------------------
Confidence 999999999999999999999988887 8889998887 36799999998865
Q ss_pred eccceEEEeccCCCCCCCceeeEEEEEEeCCcccc---c-eEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCe
Q psy8771 632 IQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK---H-HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPI 707 (904)
Q Consensus 632 ~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~---~-~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~ 707 (904)
.++.+.+|.|+|+..+.... . ........++.|.+|.|++.|.|+|+|+|..|.|++|..+
T Consensus 134 ---------------~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~v 198 (211)
T 3p4l_A 134 ---------------ANGKITGYIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAV 198 (211)
T ss_dssp ---------------CCSCCCEEEEEEESCTTSCGGGSEEEEEESSCSEEEECCCCTTCEEEEEEEEEETTEECCCCCCE
T ss_pred ---------------CCCCEEEEEEEEEECCCCCCCceEEEEecCCeeEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 56678888888887655432 1 2344567799999999999999999999999999999999
Q ss_pred eEEecCC
Q psy8771 708 PVRTKQY 714 (904)
Q Consensus 708 ~~~t~~~ 714 (904)
.+.+...
T Consensus 199 ~~~~~~~ 205 (211)
T 3p4l_A 199 QFRTPKA 205 (211)
T ss_dssp EEECC--
T ss_pred EccCccc
Confidence 9888654
No 30
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.90 E-value=1.9e-21 Score=204.66 Aligned_cols=265 Identities=14% Similarity=0.190 Sum_probs=183.1
Q ss_pred EEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCCccccC-CCCceeecceEEEEeee--cCCeEEEEEEEecCcce
Q psy8771 107 FSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQNIELT-PDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVI 182 (904)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~~~~~~-~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~ 182 (904)
+..++.. +.+..|++++|.|.+.|.+ .+.|.|+++ +..+. ...++...++.|.|.++ +|+|.|+|. ..|..
T Consensus 9 ~~~p~~~-v~~~~G~~v~l~C~~~~~~~~~~i~W~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~---~~g~~ 83 (325)
T 1n26_A 9 QEVARGV-LTSLPGDSVTLTCPGVEPEDNATVHWVLR-KPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCY---RAGRP 83 (325)
T ss_dssp CCCCTTE-EEECTTCCEEEECTTSCTTCCSEEEEEEE-CSSSSCCCEEEEEESSEEEECSCCGGGCEEEEEE---SSSSC
T ss_pred cccCCCc-EECCCCCcEEEEeCCCCCCCCceEEEEEC-CccCCccccccccccceEEecccchhhCeEeEEE---eCCEE
Confidence 3333433 6668999999999999865 789999998 43332 22344456789999999 599999999 36888
Q ss_pred EEEEEEEEEeecCCCCCCCCCCcceEEEe-ecCCeEEEEEeCC--CccceEEEEEEEeCCCC--CCe-EEe---ecceec
Q psy8771 183 ETSTIVKVQCKYAPLLTLPVAPLDVKISE-VTATSVRLDWTYP--SETLLYYVIQYKPKAAN--TPY-SEI---SGIITT 253 (904)
Q Consensus 183 ~~~~~l~v~~~~~~~~~~P~~p~~l~~~~-~~~~sv~l~W~~~--~~~~~~y~v~~~~~~~~--~~~-~~~---~~~~~~ 253 (904)
.+.+.|.|. .+|.+|. +.+.. ....++.|+|.++ ......|.|.++...+. ..+ ... ......
T Consensus 84 ~~~~~L~V~-------~pP~~P~-l~c~~~~~~~~~~c~W~~~~~~~~~~~y~l~~~~~~~~~~~~~~~~c~~~~~~~~~ 155 (325)
T 1n26_A 84 AGTVHLLVD-------VPPEEPQ-LSCFRKSPLSNVVCEWGPRSTPSLTTKAVLLVRKFQNSPAEDFQEPCQYSQESQKF 155 (325)
T ss_dssp SCEEEEEEC-------CCCCCCC-CEEEBSSTTSCEEEEECCSSCCCTTCEEEEEEEEESSSSCEEEEEEEEEETTTTEE
T ss_pred eeeEEEEec-------cCCCCCc-eeEEeecCCCcEEEEECCCCCCCCCceEEEEEEEccCCCCCcccccCCCCCCCCCE
Confidence 888999998 7888887 77763 4467999999986 33457899988754211 111 111 112235
Q ss_pred eEEEcCCC-CCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEEe
Q psy8771 254 YYTVRNLS-PYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRR 332 (904)
Q Consensus 254 ~~~i~~L~-p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~ 332 (904)
.+.|..+. +++.|.|+|.|.|..|.+. +....+
T Consensus 156 ~c~i~~~~~~~~~Y~f~v~A~N~~G~~~-s~~~~~--------------------------------------------- 189 (325)
T 1n26_A 156 SCQLAVPEGDSSFYIVSMCVASSVGSKF-SKTQTF--------------------------------------------- 189 (325)
T ss_dssp EEEECCCTTCCCEEEEEEEEEETTEEEE-CCCEEE---------------------------------------------
T ss_pred EEEECCCcccCcEEEEEEEEEcCCCCcc-cCcEEE---------------------------------------------
Confidence 56666665 5677777777777666431 111111
Q ss_pred eceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcEEEE
Q psy8771 333 IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYI 412 (904)
Q Consensus 333 ~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 412 (904)
T Consensus 190 -------------------------------------------------------------------------------- 189 (325)
T 1n26_A 190 -------------------------------------------------------------------------------- 189 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEe
Q psy8771 413 WLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRP 492 (904)
Q Consensus 413 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~ 492 (904)
......++.+|.++.+..
T Consensus 190 --------------------------------------------------------------~~~~~v~P~pP~~l~v~~ 207 (325)
T 1n26_A 190 --------------------------------------------------------------QGCGILQPDPPANITVTA 207 (325)
T ss_dssp --------------------------------------------------------------ETTTCBCCCCCEEEEEEE
T ss_pred --------------------------------------------------------------eeccccCCCCCcceEEEE
Confidence 111112346788888887
Q ss_pred cCC--ceEEEEecCCCC--CCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEEEeCCCCCCC
Q psy8771 493 LSS--STMVIQWDEPET--PNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQAFTSVGPGPL 567 (904)
Q Consensus 493 ~~~--~~~~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~ 567 (904)
.+. +++.|+|++|.. .++.+.+|+|+|+.... ..|..... ...+++.+.+|.|++.|.|+|+|.|..|.|.+
T Consensus 208 ~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~---~~W~~~~~~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g~G~~ 284 (325)
T 1n26_A 208 VARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERS---KTFTTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFGQGEW 284 (325)
T ss_dssp CTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTC---SCCEEEECGGGCSEEEESSCCTTCCEEEEEEEEETTTBSCC
T ss_pred ecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCC---CCCEEEcccCCceEEEEeCCCCCCeEEEEEEEecCCCCCCC
Confidence 653 699999999865 34578999999998753 45766543 44578899999999999999999998887665
Q ss_pred C---CcEEEec
Q psy8771 568 S---APVLVKT 575 (904)
Q Consensus 568 S---~~~~~~t 575 (904)
| ..+.+++
T Consensus 285 S~wS~~~~~~~ 295 (325)
T 1n26_A 285 SEWSPEAMGTP 295 (325)
T ss_dssp CCCCCCEEECC
T ss_pred cCCCCccceec
Confidence 5 4444444
No 31
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=99.89 E-value=3e-22 Score=199.96 Aligned_cols=193 Identities=23% Similarity=0.385 Sum_probs=162.2
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCC
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR 698 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~ 698 (904)
.+.+|.+|++...+.+++.|+|.++ ++.+.+|.|+|+..+.... .........++.|.+|+|++.|.|+|+|+|..
T Consensus 5 p~~~P~~l~~~~~~~~si~l~W~~p---~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~ 81 (234)
T 3f7q_A 5 DLGAPQNPNAKAAGSRKIHFNWLPP---SGKPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYGAQ 81 (234)
T ss_dssp CCCCCEEEEEEECSSSCEEEEEECC---SSCCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEEETT
T ss_pred CCCCCcceEEEEcCCCEEEEEEECC---CCccceEEEEEEECCCCccceEEEcCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence 4678999999999999999999996 4689999999998765443 33444567799999999999999999999999
Q ss_pred CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCc---cEEEEec--C
Q psy8771 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSE---ASIVTLK--N 773 (904)
Q Consensus 699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~---~~~~~~~--~ 773 (904)
|.|.+|..+.++|...+|.. |.++.+...+.+++.|+|++| ...+|.+.+|.|+|+..+..... ....... .
T Consensus 82 G~g~~s~~~~~~T~~~~P~~-P~~l~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 158 (234)
T 3f7q_A 82 GEGPYSSLVSCRTHQEVPSE-PGRLAFNVVSSTVTQLSWAEP--AETNGEITAYEVCYGLVNDDNRPIGPMKKVLVDNPK 158 (234)
T ss_dssp EECCCCCCEEEECCCCCCCC-CCCCEEEECSSSCEEEECCCC--SCCSSCCCEEEEEEEEBCTTSCBSSCCEECCCSCTT
T ss_pred CcCCCCCeEEEEcCCCCCCC-CCccEEEEecCCEEEEEEcCC--CCCCCceeEEEEEEEECCCCCCccCcceEEEecCCc
Confidence 99999999999999988874 788999999999999999998 45788999999999987654321 1112222 5
Q ss_pred cceEEecCCCCCceEEEEEEEeeCCCCCCCCCc-EEeecCCCCCCC
Q psy8771 774 QTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYP-ITIRTHEDDPSE 818 (904)
Q Consensus 774 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~-~~~~t~~~~P~~ 818 (904)
.+.++|.+|+|++.|.|+|+|.|..|.|++|.. +.++|.+.+|..
T Consensus 159 ~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~T~~~~P~~ 204 (234)
T 3f7q_A 159 NRMLLIENLRESQPYRYTVKARNGAGWGPEREAIINLATQPKRPMS 204 (234)
T ss_dssp CCEEEEECCCTTCCEEEEEEEEETTEECCCEEEEECGGGSCCCCCC
T ss_pred ceEEEeCCCCCCCeEEEEEEEECCCccCCCcCceeEeecCCCCCCC
Confidence 679999999999999999999999999999874 778898887743
No 32
>3s98_A Interferon alpha/beta receptor 1; human, type I interferons, receptor chain, ifnar1, fibronect III, type I interferon receptor chain; HET: NAG; 1.90A {Homo sapiens}
Probab=99.89 E-value=3.2e-22 Score=207.25 Aligned_cols=266 Identities=14% Similarity=0.038 Sum_probs=175.5
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE---EecccceEEE--eCCCCCcEEEEEEEE
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR---RIGLVETYSL--TGLYPNTLYYIWLAA 694 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~---~~~~~~~~~l--~~L~p~t~Y~v~V~a 694 (904)
..++|++|.+...+ ..+.|+|.++..+.+.+. |.|+|+..+...|... .......+.| .+|.+++.|.|+|+|
T Consensus 3 ~l~~P~nv~~~~~n-~~~iL~W~pp~~~~~~v~-Y~V~y~~~~~~~W~~~~~c~~~~~~~c~lt~~~l~~~~~Y~~rV~A 80 (306)
T 3s98_A 3 PLKSPQKVEVDIID-DNFILRWNRSDESVGNVT-FSFDYQKTGMDNWIKLSGCQNITSTKCNFSSLKLNVYEEIKLRIRA 80 (306)
T ss_dssp -----CCCEEEEET-TEEEEECC--------CE-EEEEEEESSCSSCEECTTCSSBSSSEEECCC---CTTSCEEEEEEE
T ss_pred CCCCCcEeEEEEEC-CeEEEEEcCCCCCCCCeE-EEEEEEECCCCCcEECCCccCCCCCEEEccccccCCCCcEEEEEEE
Confidence 35789999998774 457899999877666776 9999998765555322 1122345555 457899999999999
Q ss_pred EcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCC-----CCccEEEEEEEEEEccCCCCccEEE
Q psy8771 695 QSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVER-----SNGHIVYYKLQFVETGRSDSEASIV 769 (904)
Q Consensus 695 ~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~-----~~g~~~~Y~v~~~~~~~~~~~~~~~ 769 (904)
.| .|.|.++....+.+....+..||. +.+.... ++|.|+|.++. .. .+|.+.+|+|.|+..+.... ..
T Consensus 81 ~n-~~~S~~s~~~~f~~~~~~~~~pP~-v~~~~~~-~si~v~w~P~~-~~~~~~~~~g~~l~Y~v~y~~~~~~~~-~~-- 153 (306)
T 3s98_A 81 EK-ENTSSWYEVDSFTPFRKAQIGPPE-VHLEAED-KAIVIHISPGT-KDSVMWALDGLSFTYSLVIWKNSSGVE-ER-- 153 (306)
T ss_dssp EC-SSCEEEEECCCBCHHHHCBCCCCE-EEEEECS-SCEEEEEECC----CCCC-----CCEEEEEEEETTTCCC-EE--
T ss_pred Ee-CCcCCCEeeeeEechhhCccCCCe-EEEEEcC-CEEEEEEECCC-CCCcceeccCCcEEEEEEEEECCCCCe-EE--
Confidence 99 888877766677766655565665 7777544 68999999553 21 15789999999998765432 11
Q ss_pred EecCcceEEecCCCCCceEEEEEEEee--CCCCCCCCCcEEeecCCCCCCC------CccC----CcceeeCCCCCceee
Q psy8771 770 TLKNQTSFVLDELKKWTEYRIWVLAGT--SIGDGPSSYPITIRTHEDDPSE------VCPT----QNDFRKNKKTNGSNF 837 (904)
Q Consensus 770 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~--~~g~g~~s~~~~~~t~~~~P~~------v~~~----~~~W~~p~~~~~~~~ 837 (904)
.....+.+.|.+|+|++.|.|+|+|.+ ..|.|++|.++.++|..+.|.+ +... .++|+++....++..
T Consensus 154 ~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~~~g~g~~S~~~~~~T~~~~p~~~P~~v~~~~~~~s~~l~W~~p~~~~~~~v 233 (306)
T 3s98_A 154 IENIYSRHKIYKLSPETTYCLKVKAALLTSWKIGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWDYTYANMTFQV 233 (306)
T ss_dssp EEEECTEEEECSCCTTCEEEEEEEEEEGGGTEECCCCCCEEEECCSCCSSCCCEEEEEEEETTEEEEEEECSSSSCEEEE
T ss_pred EecccceEEEccCCCCCeEEEEEEEEEccCCCCCCCCCcEeeEecCCCcCCCCceEEEEEecCEEEEEeCCCCCcEEEEE
Confidence 122668899999999999999999999 6799999999999997665422 1111 239998764333323
Q ss_pred eeee--------ecCCceEE---ecCCCeeEEEEcCC-CCCcEEEEEEEEEecCCCCCCCCceEEecCC
Q psy8771 838 KGGY--------LNDPMRFD---VSDGGALELNVTGL-QPDTIYTIQVAALTRKGDGDRSKPETIKTPG 894 (904)
Q Consensus 838 ~~~~--------~~~~~~~~---~~~~~~~~~~i~~L-~p~t~Y~~~v~a~n~~G~g~~s~~~~~~t~~ 894 (904)
.+.. .+...+.. +.+...+.|.+.+| .++..|.|||+|.|..|.|.+|....|.|..
T Consensus 234 ~~~~gy~~~~~~~~~~~W~~~~~c~~~~~~~c~~~~~~~~~~~Y~~RV~A~n~~~~s~~s~~~~~~~~~ 302 (306)
T 3s98_A 234 QWLHAFLKRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYLLRVQASDGNNTSFWSEEIKFDTEI 302 (306)
T ss_dssp EEEEGGGGSCC----CCCEECGGGTTBSSSEEEEEGGGSCSSEEEEEEEEECSSCBCCCCCCEEEEC--
T ss_pred EEehhhhhccccccccCceECCCceeCCCccccCchhhcccCCEEEEEEEccCCCccccccccccCccc
Confidence 2221 12334543 24567778888884 4555999999999999999999999998864
No 33
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.89 E-value=1.1e-21 Score=212.96 Aligned_cols=121 Identities=12% Similarity=0.081 Sum_probs=94.4
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCc
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLG 180 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g 180 (904)
.+..+...|.+ ..+..|++++|.|.+. .+.|.|+++ +..+... ++....+.|.|.++ +|+|.|.|.+.+ +
T Consensus 202 ~~t~i~v~P~~-~~v~~Gs~vtl~C~a~---~~~I~W~~n-g~~i~~~-ri~~~~~~L~I~nl~~sd~g~y~~~C~~--~ 273 (488)
T 2q7n_A 202 RNTETNVFPQD-KVVLAGSNMTICCMSP---TKVLSGQIG-NTLRPLI-HLYGQTVAIHILNIPVSENSGTNIIFIT--D 273 (488)
T ss_dssp CCSSCCEECTT-CEEESSCCCEEEECCS---SCEEEEEET-TEECCCE-ECSSSCEEEECCSCCCCCSSCEEEEEEE--S
T ss_pred CCCceEECCCC-CEEcCCCCEEEEEECC---CCEEEEEEC-CEECchh-hccceEEEEEEeCCCcccCCcEEEEEEc--C
Confidence 44456667777 7789999999999999 468999999 6666543 44445678999999 578888887763 3
Q ss_pred ceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCc------cceEEEEEEEeC
Q psy8771 181 VIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE------TLLYYVIQYKPK 238 (904)
Q Consensus 181 ~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~------~~~~y~v~~~~~ 238 (904)
.....+.|.+. .+|.+|.++.+......+++|+|.++.. ....|.|.++..
T Consensus 274 ~~i~~~~l~v~-------~pP~~P~nl~C~~~~~~svtcsW~pg~~~~l~G~~~t~Y~L~y~~~ 330 (488)
T 2q7n_A 274 DDVYGTVVFAG-------YPPDVPQKLSCETHDLKEIICSWNPGRITGLVGPRNTEYTLFESIS 330 (488)
T ss_dssp SCEEEEEEEEE-------CCCCCCCSCEEEBSSSSEEEEEECCCSCCCCCTTSSCEEEEEETTT
T ss_pred CeEEEEEEEee-------CCCCCCcccEEEEcCCCEEEEEEeCCCcCCCCCCCceeEEEEEEEC
Confidence 33457788887 8999999999988888999999999822 367999998754
No 34
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=99.89 E-value=1.2e-21 Score=191.37 Aligned_cols=192 Identities=18% Similarity=0.326 Sum_probs=154.5
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE---eecCceEEEEcCCCCCCeEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ---VVDNNQLTTISDLTPHTIYTIRV 556 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~L~p~t~Y~~~V 556 (904)
.+|.+|.++.+.. +.+++.|+|++|.+.++.+.+|.|+|+..... ..|... .....+.+.+ +|.|++.|.|+|
T Consensus 4 ~~P~~P~~~~~~~-~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~--~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~~V 79 (205)
T 1cfb_A 4 DVPNAPKLTGITC-QADKAEIHWEQQGDNRSPILHYTIQFNTSFTP--ASWDAAYEKVPNTDSSFVV-QMSPWANYTFRV 79 (205)
T ss_dssp CCCCCCEEEEEEE-CSSEEEEEEECCCCTTSCCCEEEEEEEESSST--TCCEEEEEEEETTCSEEEE-ECCSSEEEEEEE
T ss_pred cCCCCCCCcEEEe-cCCEEEEEEECcccCCCceEEEEEEEecCCCC--CCceeeeeccCCCceEEEE-eCCCCCEEEEEE
Confidence 3457999999999 99999999999977778999999999876422 345322 2245667777 999999999999
Q ss_pred EEEeCCCCCCCC-CcEEEecCCCCCC-CCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeecc
Q psy8771 557 QAFTSVGPGPLS-APVLVKTQQGVPS-QPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQE 634 (904)
Q Consensus 557 ~a~~~~g~~~~S-~~~~~~t~~~~p~-~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~ 634 (904)
+|+|..|.|.+| ....+.|....|. +|.++.+...+.+++.|+|.++..
T Consensus 80 ~A~n~~G~~~~s~~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~----------------------------- 130 (205)
T 1cfb_A 80 IAFNKIGASPPSAHSDSCTTQPDVPFKNPDNVVGQGTEPNNLVISWTPMPE----------------------------- 130 (205)
T ss_dssp EEEETTEECCCCCCCCCEEECCCCCSCCCSCCEEECSSTTCEEEECCCCCG-----------------------------
T ss_pred EEEECCccCCCCCCceeEEcCCcCCCCCCeeeEeecCCCCeEEEEEECCCc-----------------------------
Confidence 999999999888 5578888877774 788999999899999999998861
Q ss_pred ceEEEeccCCCCCCCceeeEEEEEEeCCccc-cceEEe--cccceEEEeCCCCCcEEEEEEEEEcCCCCCCC-CCCeeEE
Q psy8771 635 TAVTLAWSKPTHSGENIISYELYWNDTYAKA-KHHRRI--GLVETYSLTGLYPNTLYYIWLAAQSPRGEGAT-TPPIPVR 710 (904)
Q Consensus 635 ~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~-~~~~~~--~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~-s~~~~~~ 710 (904)
...++.+.+|.|+|+..+... +..... ....++.|.+|.|++.|.|+|+|+|..|.|.+ |..+.++
T Consensus 131 ----------~~~ng~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~ss~~v~~~ 200 (205)
T 1cfb_A 131 ----------IEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAINDRGESNVAAEEVVGY 200 (205)
T ss_dssp ----------GGTCSSSCEEEEEEEESSTTCCCEEEEECCTTCCEEEECSCCSSCEEEEEEEEEETTEECSSCCCCEEEE
T ss_pred ----------cccCCCceEEEEEEEECCCCCCcEEEEecCCCccEEEEcCCCCCcEEEEEEEEEcCCCcCCCCCCcEEEe
Confidence 015667889999998877654 333222 24679999999999999999999999999995 6788888
Q ss_pred ecCC
Q psy8771 711 TKQY 714 (904)
Q Consensus 711 t~~~ 714 (904)
|.++
T Consensus 201 T~e~ 204 (205)
T 1cfb_A 201 SGED 204 (205)
T ss_dssp SSSC
T ss_pred cCCC
Confidence 8765
No 35
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.89 E-value=7.7e-22 Score=210.61 Aligned_cols=303 Identities=13% Similarity=0.104 Sum_probs=166.6
Q ss_pred eEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecC-CceEEEEecCCCC---CCCceeeEEEEEEeCCCCC
Q psy8771 451 TLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLS-SSTMVIQWDEPET---PNGQITGYKVYYTQDQSLP 526 (904)
Q Consensus 451 ~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~-~~~~~l~W~~p~~---~~~~i~~Y~v~~~~~~~~~ 526 (904)
..|.+.+-+.+..|.+..+ ....++.+|.++.+...+ .+++.|+|+++.+ .++.+..|+|+|+..++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~-------~~~v~~~pP~nl~v~~~~~~~~v~LsW~p~~~~~~~~~~~~~Y~v~~~~~~~-- 78 (380)
T 3lb6_C 8 VGCLYTFLISTTFGCTSSS-------DTEIKVNPPQDFEIVDPGYLGYLYLQWQPPLSLDHFKECTVEYELKYRNIGS-- 78 (380)
T ss_dssp ------------------------------CCCCCEEEEEECCSSSSEEEEEEECCCC------CCCEEEEEEEETTC--
T ss_pred hhhhhhheeecccccccCC-------cccccCCcCCceEEEecCcCceEEEEECCCCCccccccceEEEEEEECCCCC--
Confidence 3566677777776654321 122346789999998776 6899999999875 33568999999998762
Q ss_pred CcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeC----CCCCCCCCcEEEec---CCCC-CCCCCCceEEecCCCeEEE
Q psy8771 527 MSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTS----VGPGPLSAPVLVKT---QQGV-PSQPRDLRAVDIQETAVTL 598 (904)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~----~g~~~~S~~~~~~t---~~~~-p~~p~~~~~~~~~~~~~~l 598 (904)
..|+......... ..++..++.|.|+|+|+|. .|.|.+|......+ .++. |.+|.++.+...+.+.+.+
T Consensus 79 -~~w~~~~~~~~~~--~~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~l~c 155 (380)
T 3lb6_C 79 -ETWKTIITKNLHY--KDGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLC 155 (380)
T ss_dssp -SSCEEEEESSSEE--EEECCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTEEEE
T ss_pred -CcceEEEeccEEE--EEeecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECCCcEEEE
Confidence 4577766654333 3455669999999999965 66676666554443 4344 4589999999989999999
Q ss_pred EEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc---ceEE-e-cc
Q psy8771 599 AWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK---HHRR-I-GL 673 (904)
Q Consensus 599 ~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~---~~~~-~-~~ 673 (904)
+|+++.. .+...+|.|.|+..+.... .... . +.
T Consensus 156 sW~p~~~------------------------------------------~~~~~~Y~l~y~~~~~~~~~~C~~~~~~~g~ 193 (380)
T 3lb6_C 156 SWKPGIG------------------------------------------VLLDTNYNLFYWYEGLDHALQCVDYIKADGQ 193 (380)
T ss_dssp EEECC------------------------------------------------CCEEEEEECTTCSSCEECSEEEEC--C
T ss_pred EEcCCCC------------------------------------------CCCCccEEEEEEECCCCccccCCCccccCCc
Confidence 9998753 2345678888876554321 1111 1 22
Q ss_pred cceEEEe--CCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEE
Q psy8771 674 VETYSLT--GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVY 751 (904)
Q Consensus 674 ~~~~~l~--~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~ 751 (904)
...+.+. ++.+.+.|.|+|.|.|..|.+.. ..+.+.+....++.||.++.+...+.+++.|+|++|.. ...+.+.+
T Consensus 194 ~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~s-~~~~~~~~~~v~p~pP~~l~v~~~~~~~l~l~W~~P~~-~~~~~~l~ 271 (380)
T 3lb6_C 194 NIGCRFPYLEASDYKDFYICVNGSSENKPIRS-SYFTFQLQNIVKPLPPVYLTFTRESSCEIKLKWSIPLG-PIPARCFD 271 (380)
T ss_dssp EEEEECCCCTTCSSSCEEEEEEEC-----CCC-EEEEECGGGSCCCCCCEEEEEC-------CEEEECCSS-SCCSTTEE
T ss_pred eEEEEeCCCcccceeEEEEEEEEEcCCeeecc-ccEEEcHHHcccCCCCceEEEEEcCCCeEEEEECCCCC-CCCcceEE
Confidence 2355555 56888999999999998876543 34567776666666899999987778899999999853 12246789
Q ss_pred EEEEEEEccCCCCccEEEEecCcceEEecC-CCCCceEEEEEEEeeC-----CC-CCCCCCcEEeecCCC
Q psy8771 752 YKLQFVETGRSDSEASIVTLKNQTSFVLDE-LKKWTEYRIWVLAGTS-----IG-DGPSSYPITIRTHED 814 (904)
Q Consensus 752 Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~-L~p~t~Y~~~V~a~~~-----~g-~g~~s~~~~~~t~~~ 814 (904)
|+|+|+..+. .+. .......+.|.+ |+|++.|.|+|+|... .| .|++|+++.+.|..+
T Consensus 272 Yev~y~~~~~-~w~----~~~~~~~~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~t~~~ 336 (380)
T 3lb6_C 272 YEIEIREDDT-TLV----TATVENETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDL 336 (380)
T ss_dssp EEECC-------------CCEESSSCC------------CCEEEEECTTTCSSCCCCCCCCC--------
T ss_pred EEEEEEeCCC-Cce----EecccceEEEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEEeCCCC
Confidence 9999998532 221 111123577888 9999999999999943 23 377788888888654
No 36
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.89 E-value=8.9e-22 Score=192.96 Aligned_cols=189 Identities=19% Similarity=0.285 Sum_probs=155.7
Q ss_pred ccCCCCCcceEEEeeccceEEEeccCCCCCCCc-eeeEEEEEEeCCccccceEEec-----ccceEEEeCCCCCcEEEEE
Q psy8771 618 NDTYAKPRDLRAVDIQETAVTLAWSKPTHSGEN-IISYELYWNDTYAKAKHHRRIG-----LVETYSLTGLYPNTLYYIW 691 (904)
Q Consensus 618 ~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~-~~~y~v~~~~~~~~~~~~~~~~-----~~~~~~l~~L~p~t~Y~v~ 691 (904)
.+.|.+|.++.+...+. ++.|+|.++...++. +.+|.|+|+..+...+...... ....+.+.+|+|++.|.|+
T Consensus 6 ~~~P~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 84 (209)
T 2vkw_A 6 ADTPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVR 84 (209)
T ss_dssp CCCCCCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCEEEEE
T ss_pred cCCCcCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCeEEEE
Confidence 44678899999988887 689999998765664 9999999998876666443322 2468999999999999999
Q ss_pred EEEEcCCCCCCCCCCeeEEecCC-CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEE
Q psy8771 692 LAAQSPRGEGATTPPIPVRTKQY-VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT 770 (904)
Q Consensus 692 V~a~~~~G~~~~s~~~~~~t~~~-~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~ 770 (904)
|+|+|..|.|.+|..+.+.|... +|. +|.++.+...+.+++.|+|++| +..++.+.+|.|+|+. ....+.. ...
T Consensus 85 V~A~n~~G~~~~s~~~~~~T~~~~~P~-~P~~~~~~~~~~~sv~l~W~~p--~~~~~~i~~Y~v~~~~-~~~~~~~-~~~ 159 (209)
T 2vkw_A 85 LAALNGKGLGEISAASEFKTQPVREPS-APKLEGQMGEDGNSIKVNLIKQ--DDGGSPIRHYLVRYRA-LSSEWKP-EIR 159 (209)
T ss_dssp EEEEETTEECCCCCCEEEECCCSCSCC-CCEEEEEECTTSSCEEEEEECC--CCTTSCCCEEEEEEEE-TTSCCCC-CEE
T ss_pred EEEEcCCcccCCcccccccccCCCCCC-CCcccccccccCCeEEEEEECc--ccCCCCCceEEEEEEC-CCCCCce-eee
Confidence 99999999999998888888876 455 6778888889999999999998 5678999999999998 3333322 233
Q ss_pred ec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecC
Q psy8771 771 LK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTH 812 (904)
Q Consensus 771 ~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~ 812 (904)
+. ..+.++|.+|++++.|.|+|+|.|..|.|++|....+++.
T Consensus 160 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~~~ 202 (209)
T 2vkw_A 160 LPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRTAA 202 (209)
T ss_dssp ECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECC-
T ss_pred cCCCccEEEecCCCCCCEEEEEEEEEeCCccCCcchhhhhhhh
Confidence 44 7789999999999999999999999999999987776654
No 37
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.88 E-value=1.8e-21 Score=191.66 Aligned_cols=190 Identities=17% Similarity=0.216 Sum_probs=153.1
Q ss_pred CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCc-cccceEE-------------ecccceEEEeCCCCCc
Q psy8771 621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA-KAKHHRR-------------IGLVETYSLTGLYPNT 686 (904)
Q Consensus 621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~-~~~~~~~-------------~~~~~~~~l~~L~p~t 686 (904)
+.+|.++.+..++.+++.|+|.++...++.+.+|.|+|+..+. ..+.... ......+.+.+|.|++
T Consensus 2 ~~pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t 81 (214)
T 2ibg_A 2 TYPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQH 81 (214)
T ss_dssp CCCCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSSCCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTTC
T ss_pred CCCCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCCCcCcccccccCccccccccccCcceeEEecCCcCCC
Confidence 4688999999999999999999988777899999999998654 2221111 0345688999999999
Q ss_pred EEEEEEEEEcCCCCCCCCC-CeeEEecCC---CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccC-
Q psy8771 687 LYYIWLAAQSPRGEGATTP-PIPVRTKQY---VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGR- 761 (904)
Q Consensus 687 ~Y~v~V~a~~~~G~~~~s~-~~~~~t~~~---~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~- 761 (904)
.|.|+|+|+|..|.|..+. ...+.+... .|..+|.++.+...+.+++.|+|+++. +..++.+.+|.|+|+..+.
T Consensus 82 ~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~-~~~~~~i~~Y~v~~~~~~~~ 160 (214)
T 2ibg_A 82 TYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLAS-DADEHLITGYYAYYRPSSSA 160 (214)
T ss_dssp EEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCT-TCCGGGCCEEEEEEEETTCC
T ss_pred EEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCC-ccCCCCcceEEEEEEECCCC
Confidence 9999999999999877665 344444433 233467889998889999999999996 4678999999999998775
Q ss_pred CCCccEEEEec--CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCC
Q psy8771 762 SDSEASIVTLK--NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813 (904)
Q Consensus 762 ~~~~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~ 813 (904)
..+ ....+. ..+.++|.+|+|++.|.|+|+|.|..|.|++|..+.++|..
T Consensus 161 ~~~--~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~ 212 (214)
T 2ibg_A 161 GEY--FKATIEGAHARSFKIAPLETATMYEFKLQSFSAASASEFSALKQGRTQR 212 (214)
T ss_dssp SCC--EEEEEECTTCCEEEECSCCTTCEEEEEEEEECSSCBCCCCCCEEEECCC
T ss_pred cce--EEeeccCCcceEEEeCCCCCCCEEEEEEEEEcCCccCCCcceEeeEecC
Confidence 223 223333 57899999999999999999999999999999999999964
No 38
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.88 E-value=1.6e-20 Score=205.03 Aligned_cols=305 Identities=18% Similarity=0.244 Sum_probs=198.3
Q ss_pred eccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCC------CceeeEEEEE
Q psy8771 446 ALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPN------GQITGYKVYY 519 (904)
Q Consensus 446 ~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~------~~i~~Y~v~~ 519 (904)
.+.-...|.|+|+|.|..|. ...+.......+.||.+|.+...+ +.+.|+|++|.... +....|.|+|
T Consensus 78 ~~~~~~~~~~~v~~~~~~~~-----~~~~~~~~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~~~~~~~~l~Y~v~y 151 (419)
T 2gys_A 78 SFVVTDVDYFSFQPDRPLGT-----RLTVTLTQHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQSHWLSPGDLEFEVVY 151 (419)
T ss_dssp CCCTTCEEEEEEEESSCCCE-----EEEEEGGGSBCCCCCEEEEEEEET-TEEEEEEECCC-----CCSCGGGEEEEEEE
T ss_pred ceeeecccEEEEeCCccccc-----cceEcHHHcccCCCCCceEEEecC-CeEEEEECCCccccccchhccCceEEEEEE
Confidence 34456789999999665443 233444444667899999998776 69999999976432 3468899999
Q ss_pred EeCCCCCCcceEEEeecCceEEEEc--CCCCCCeEEEEEEEEeCCC---CC---CCCCcEEEecCCCCCCCCCCceEEec
Q psy8771 520 TQDQSLPMSAWETQVVDNNQLTTIS--DLTPHTIYTIRVQAFTSVG---PG---PLSAPVLVKTQQGVPSQPRDLRAVDI 591 (904)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~--~L~p~t~Y~~~V~a~~~~g---~~---~~S~~~~~~t~~~~p~~p~~~~~~~~ 591 (904)
+... ..+..... .......+.+. +|.|++.|.|+|+|.+..| .| .||..+.+.+..+.|.+|.++.+...
T Consensus 152 r~~~-~~w~~~~~-~~~~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~~~~p~~l~c~~~ 229 (419)
T 2gys_A 152 KRLQ-DSWEDAAI-LLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGDEAQPQNLECFFD 229 (419)
T ss_dssp EETT-SCSTTCEE-EEESSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCCTTSCEEEEEEEC
T ss_pred ccCC-CChhheee-ecccceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccccCCCceEEEEEC
Confidence 9875 22222112 12234555666 9999999999999999643 33 45677888898888889999999988
Q ss_pred CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcc-----c-
Q psy8771 592 QETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK-----A- 665 (904)
Q Consensus 592 ~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~-----~- 665 (904)
+.+.+.+.|++... .. ...+|.|.|+..... .
T Consensus 230 ~~~~l~c~W~~~~~-----------------------------------------~~-~~~~y~l~y~~~~~~g~~~~~~ 267 (419)
T 2gys_A 230 GAAVLSCSWEVRKE-----------------------------------------VA-SSVSFGLFYKPSPDAGSAVLLR 267 (419)
T ss_dssp SSSEEEEEEEEEHH-----------------------------------------HH-TTCCEEEEEECC-----CCCCC
T ss_pred CceEEEeEEECCCC-----------------------------------------CC-CceeEEEEEEecCccccccCcc
Confidence 88999999998632 01 123466666654210 0
Q ss_pred c---ce-EEe-------cccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEE
Q psy8771 666 K---HH-RRI-------GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIR 734 (904)
Q Consensus 666 ~---~~-~~~-------~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~ 734 (904)
. .. ... .....+.+.+|.+.+.|.|+|.|.++.| .+.+.......|| .+.+.. ..+++.
T Consensus 268 ~~~C~~~~~~~~~~~~~~~~c~~~~~~l~~~~~y~i~V~a~~~~~--------~~~~~~~v~p~PP-~l~v~~-~~~~l~ 337 (419)
T 2gys_A 268 EEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAEK--------HIKSSVNIQMAPP-SLQVTK-DGDSYS 337 (419)
T ss_dssp CEECCCEEEECCTTTEEEEEEEEECSCTTTCCEEEEEEEECCCCE--------EEEGGGSBCCCCC-EEEEC----CCCE
T ss_pred cccCCCcccccCCCcceeEEeEEECccCCccCEEEEEEEEccCCc--------cccceEEEEECCC-CeEEEE-eCCeEE
Confidence 0 00 110 0122566788999999999999975432 1222222233355 466655 478999
Q ss_pred EEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEeeCCC-----CCCCCCcEEe
Q psy8771 735 ISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIG-----DGPSSYPITI 809 (904)
Q Consensus 735 l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g-----~g~~s~~~~~ 809 (904)
|+|++|.....+ .+.+|+|+|+..+..........+...+.+.|.+|+|++.|.|+|+|.+..| .|.+|.++.+
T Consensus 338 l~W~~P~~~~~~-~~l~Yev~y~~~~~~w~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~ 416 (419)
T 2gys_A 338 LRWETMKMRYEH-IDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSW 416 (419)
T ss_dssp EEEEC---------CEEEEEEEECSSSCSTTSCEEEEESCSEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEEC
T ss_pred EEECCCcccccc-cceEEEEEEEcCCCCcceeeccccccccEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEe
Confidence 999999532222 4779999999876431112122222678999999999999999999999763 3477888877
Q ss_pred ec
Q psy8771 810 RT 811 (904)
Q Consensus 810 ~t 811 (904)
.|
T Consensus 417 ~t 418 (419)
T 2gys_A 417 DT 418 (419)
T ss_dssp CC
T ss_pred eC
Confidence 66
No 39
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.88 E-value=4.3e-21 Score=200.89 Aligned_cols=276 Identities=13% Similarity=0.135 Sum_probs=185.7
Q ss_pred CCCCCeEEEecCCceEEEEecCCCCC-CCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEe-
Q psy8771 483 TAPRDVQVRPLSSSTMVIQWDEPETP-NGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFT- 560 (904)
Q Consensus 483 ~~p~~l~v~~~~~~~~~l~W~~p~~~-~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~- 560 (904)
.+|.+|++.....+++.|+|++|... ++.+.+|.|.+.... ..... ...+.+.+|.++..|.|+|+|.+
T Consensus 5 ~pP~nl~~~~~~~~~v~l~W~pP~~~~~~~~~~Y~v~~~~~~-------~~~~~--~~~~~~~~~~~~~~y~~~V~a~~~ 75 (314)
T 3bpo_C 5 PPVTNLSVSVENLCTVIWTWNPPEGASSNCSLWYFSHFGDKQ-------DKKIA--PETRRSIEVPLNERICLQVGSQCS 75 (314)
T ss_dssp CCCEEEEEEEETTTEEEEEEECCSSCCCSSCCCEEECCC--C-------CCEEE--SSSEEEEECCCSSCEEEEEEECC-
T ss_pred CCCcceEEEeCCceEEEEEEcCCCCCCCCceEEEEEEecccC-------ceEec--cccEEEEEEcCCCcEEEEEEEEec
Confidence 68999999988899999999998654 567789999874421 11111 22346678999999999999964
Q ss_pred CCCCCCCCCcEEEe--cCCC-CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceE
Q psy8771 561 SVGPGPLSAPVLVK--TQQG-VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAV 637 (904)
Q Consensus 561 ~~g~~~~S~~~~~~--t~~~-~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~ 637 (904)
..|.|..|..+... +..+ +|.+|.++.+...+...+.++|.++..
T Consensus 76 ~~~~g~~s~~~~~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~~-------------------------------- 123 (314)
T 3bpo_C 76 TNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRN-------------------------------- 123 (314)
T ss_dssp --------CCEEEEECCCCC-CCSSCEEEEEEEETTTEEEEEEECCC---------------------------------
T ss_pred CCCCCCCCcCeeeeeecCCCCCCCCCEeceEEECCCCeEEEEECCCCC--------------------------------
Confidence 56666677766532 3333 445889999998888999999998863
Q ss_pred EEeccCCCCCCCceeeEEEEEEeCCccccc----eEEecccceEEEeCCC----CCcEEEEEEEEEcCCCCCCCCCCeeE
Q psy8771 638 TLAWSKPTHSGENIISYELYWNDTYAKAKH----HRRIGLVETYSLTGLY----PNTLYYIWLAAQSPRGEGATTPPIPV 709 (904)
Q Consensus 638 ~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~----~~~~~~~~~~~l~~L~----p~t~Y~v~V~a~~~~G~~~~s~~~~~ 709 (904)
.+.+.+|.|.|+..+..... ....+....+.+..+. ..+.|.|+|.|.|..|.+..+ ...+
T Consensus 124 ----------~~~~~~Y~l~y~~~~~~~~~~C~~~~~~~~~~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~-~~~~ 192 (314)
T 3bpo_C 124 ----------TSPDTNYTLYYWHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPS-FNIV 192 (314)
T ss_dssp ------------CCCCEEEEEEESSCSSCEECCCEEEETTEEEEEEECCC--------CCEEEEEEETTSCSCCE-EEEE
T ss_pred ----------CCCCccEEEEEEeCCCCccccCcCeecCCCeEEEEECCCCccccceeEEEEEEEEEcCCCceecc-cEEE
Confidence 23467888887765432211 1122334677777776 378999999999998887544 3555
Q ss_pred EecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEE-----------e-cCcceE
Q psy8771 710 RTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT-----------L-KNQTSF 777 (904)
Q Consensus 710 ~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~-----------~-~~~~~~ 777 (904)
.+.....+.||.+|++. ...+++.|+|++|. ..++.+.+|+|+|+..+...+...... . ...+.+
T Consensus 193 ~~~~~v~P~pP~~l~~~-~~~~~l~lsW~~P~--~~~~~~l~Yev~y~~~~~~~w~~~~~~~~~c~~~~~~~~~~~~~~~ 269 (314)
T 3bpo_C 193 PLTSRVKPDPPHIKNLS-FHNDDLYVQWENPQ--NFISRCLFYEVEVNNSQTETHNVFYVQEAKCENPEFERNVENTSCF 269 (314)
T ss_dssp CSSSSEECCCCEEEEEE-EETTEEEEEEECCT--TCCGGGEEEEEEEEC--CCCEEEEEESCCCCCCTTSSCCCSSEEEE
T ss_pred ehhheEeeCCCCEEEEE-EcCCcEEEEEeCCC--ccCCceEEEEEEEEECCCCcceEEecccccccccccccccCCceEE
Confidence 54444434478999997 67889999999995 345567899999998765433211110 1 256789
Q ss_pred EecCCCCCceEEEEEEEeeC------CC-CCCCCCcEEeecCC
Q psy8771 778 VLDELKKWTEYRIWVLAGTS------IG-DGPSSYPITIRTHE 813 (904)
Q Consensus 778 ~i~~L~p~t~Y~~~V~a~~~------~g-~g~~s~~~~~~t~~ 813 (904)
.|.+|+|++.|.|+|+|.+. .| .|.+|.++.+.+..
T Consensus 270 ~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~~ 312 (314)
T 3bpo_C 270 MVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKKR 312 (314)
T ss_dssp EEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCCC
T ss_pred EEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEecccC
Confidence 99999999999999999984 45 47888888876543
No 40
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.88 E-value=1.6e-20 Score=196.63 Aligned_cols=272 Identities=22% Similarity=0.298 Sum_probs=190.8
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCceee---c--ceEEEEeee--cCCeEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPV---G--RNVLTLDRV--TESENYTC 173 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~---~--~~~l~i~~l--~d~g~Y~c 173 (904)
..||.|...|.+ +.+.+|++++|.|.+.|.|.+.|.|+|+ +..+.. ..++.+ . ...|.|.++ +|+|.|+|
T Consensus 2 ~~~P~~~~~p~~-~~v~~G~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 79 (305)
T 2nzi_A 2 AMAPHFKEELRN-LNVRYQSNATLVCKVTGHPKPIVKWYRQ-GKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV 79 (305)
T ss_dssp CCCCEEEECCCC-EEECTTCCEEEEEEEECSSCCEEEEEET-TEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEE
T ss_pred CCCCeeeecccc-eEEeCCCcEEEEEEEeCCCCCeEEEEEC-CEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEE
Confidence 358999999988 9999999999999999999999999999 555543 344443 2 238999999 69999999
Q ss_pred EEEecCcceEEEEEEEEEeecCCCCCCCC---CCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEE
Q psy8771 174 IAASVLGVIETSTIVKVQCKYAPLLTLPV---APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSE 246 (904)
Q Consensus 174 ~a~n~~g~~~~~~~l~v~~~~~~~~~~P~---~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~ 246 (904)
.|.|..|..+..+.|.|.... ....|. .+..+.+. ....+.|.+...+.+.. .+.|...+. ...+..
T Consensus 80 ~a~n~~g~~~~~~~l~V~~~p--~~~~~~~~~~~~~~~~~--~g~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~~ 153 (305)
T 2nzi_A 80 RATNQGGSVSGTASLEVEVPA--KIHLPKTLEGMGAVHAL--RGEVVSIKIPFSGKPDP--VITWQKGQDLIDNNGHYQV 153 (305)
T ss_dssp EEEETTEEEEEEEEEEECEEE--EECCCHHHHSSCCEEEE--TTCCEEEEEEEEEESCC--EEEEEESSSBCCSSSSCEE
T ss_pred EEEcCCCCccceEEEEEecCC--ccCCCccccccccEEec--CCCEEEEEEEECCCCCC--EEEEEECCEECCCCCcEEE
Confidence 999999998888888887321 111111 11233332 23445555544322222 344443321 122333
Q ss_pred eecceeceEEEcC-CCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCcee
Q psy8771 247 ISGIITTYYTVRN-LSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQI 325 (904)
Q Consensus 247 ~~~~~~~~~~i~~-L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~ 325 (904)
........+.|.+ +.+.+.|.|+|.|.|..|....+.. |
T Consensus 154 ~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~----------------------------l------------ 193 (305)
T 2nzi_A 154 IVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGIDQKTVE----------------------------L------------ 193 (305)
T ss_dssp EECSSEEEEEETTCCCSTTCEEEEEEEEETTEEEEEEEE----------------------------E------------
T ss_pred EEcCCceEEEEecCCccCccEEEEEEEEeCCCceeeEEE----------------------------E------------
Confidence 3333457789999 9999999999999998764210000 0
Q ss_pred eEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccc
Q psy8771 326 TAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLY 405 (904)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (904)
T Consensus 194 -------------------------------------------------------------------------------- 193 (305)
T 2nzi_A 194 -------------------------------------------------------------------------------- 193 (305)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCC
Q psy8771 406 PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAP 485 (904)
Q Consensus 406 ~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p 485 (904)
.|. .+|.+|
T Consensus 194 --------------------------------------------------~v~---------------------~~P~~p 202 (305)
T 2nzi_A 194 --------------------------------------------------DVA---------------------DVPDPP 202 (305)
T ss_dssp --------------------------------------------------EEE---------------------BCCCCC
T ss_pred --------------------------------------------------EEe---------------------cCCCCC
Confidence 000 123567
Q ss_pred CCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCC
Q psy8771 486 RDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGP 564 (904)
Q Consensus 486 ~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~ 564 (904)
.++.+.....+++.|+|.+|...++ .+..|.|+++.... ..|..........+.+.+|.+++.|.|+|+|.|..|.
T Consensus 203 ~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~~---~~w~~~~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~ 279 (305)
T 2nzi_A 203 RGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATTA---ERWLRVGQARETRYTVINLFGKTSYQFRVIAENKFGL 279 (305)
T ss_dssp EEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETTS---CCEEEEEEESSSEEEECSCCSSCEEEEEEEEEETTEE
T ss_pred CCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCCC---CccEECccccCceEEecCCCCCCeEEEEEEEEeCCcc
Confidence 7788888888999999998755444 78999999998753 5677666656778999999999999999999999999
Q ss_pred CCCCCcEEEec
Q psy8771 565 GPLSAPVLVKT 575 (904)
Q Consensus 565 ~~~S~~~~~~t 575 (904)
+.+|......+
T Consensus 280 ~~~S~~~~~~~ 290 (305)
T 2nzi_A 280 SKPSEPSEPTI 290 (305)
T ss_dssp CCCCCCCCCEE
T ss_pred cCCcCCCCCEE
Confidence 98887765433
No 41
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=99.88 E-value=4e-21 Score=188.30 Aligned_cols=187 Identities=25% Similarity=0.341 Sum_probs=150.9
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCc-eeeEEEEEEeCCCCCCcceEEEee-----cCceEEEEcCCCCCCeEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYTQDQSLPMSAWETQVV-----DNNQLTTISDLTPHTIYT 553 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~-i~~Y~v~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~L~p~t~Y~ 553 (904)
.+|.+|.++.+...+. ++.|+|++|...+|. +.+|.|+|+.... ..|..... ...+.+.+.+|.|++.|.
T Consensus 7 ~~P~~P~~~~~~~~~~-s~~l~W~~p~~~~g~~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 82 (209)
T 2vkw_A 7 DTPSSPSIDQVEPYSS-TAQVQFDEPEATGGVPILKYKAEWRAVGE---EVWHSKWYDAKEASMEGIVTIVGLKPETTYA 82 (209)
T ss_dssp CCCCCCEEEEEEECSS-CEEEEEECCSCCCSSCCCEEEEEEEESSC---CCCEEEEEEHHHHHHHSEEEECCCCTTCEEE
T ss_pred CCCcCCcccEeeeccC-eEEEEEcCCCcCCCcceeEEEEEEeeCCC---CCceEeEeeccCCCccceEEeCCCCCCCeEE
Confidence 3457899999988887 699999998766774 9999999998764 34544433 235589999999999999
Q ss_pred EEEEEEeCCCCCCCCCcEEEecCCC-CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEee
Q psy8771 554 IRVQAFTSVGPGPLSAPVLVKTQQG-VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDI 632 (904)
Q Consensus 554 ~~V~a~~~~g~~~~S~~~~~~t~~~-~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~ 632 (904)
|+|+|.|..|.|.+|....+.|... .|.+|..+.+...+.+++.|+|.++..
T Consensus 83 ~~V~A~n~~G~~~~s~~~~~~T~~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~--------------------------- 135 (209)
T 2vkw_A 83 VRLAALNGKGLGEISAASEFKTQPVREPSAPKLEGQMGEDGNSIKVNLIKQDD--------------------------- 135 (209)
T ss_dssp EEEEEEETTEECCCCCCEEEECCCSCSCCCCEEEEEECTTSSCEEEEEECCCC---------------------------
T ss_pred EEEEEEcCCcccCCcccccccccCCCCCCCCcccccccccCCeEEEEEECccc---------------------------
Confidence 9999999999999999888888776 678888888888899999999999854
Q ss_pred ccceEEEeccCCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEE
Q psy8771 633 QETAVTLAWSKPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVR 710 (904)
Q Consensus 633 ~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~ 710 (904)
.++.+.+|.|+|+.. ...+ .........++.|.+|+|++.|.|+|+|+|..|.|.+|....+.
T Consensus 136 --------------~~~~i~~Y~v~~~~~-~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s~~S~~~~~~ 200 (209)
T 2vkw_A 136 --------------GGSPIRHYLVRYRAL-SSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAENQQGKSKAAHFVFRT 200 (209)
T ss_dssp --------------TTSCCCEEEEEEEET-TSCCCCCEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEEC
T ss_pred --------------CCCCCceEEEEEECC-CCCCceeeecCCCccEEEecCCCCCCEEEEEEEEEeCCccCCcchhhhhh
Confidence 567888999999883 3333 22333455789999999999999999999999999988665554
Q ss_pred ec
Q psy8771 711 TK 712 (904)
Q Consensus 711 t~ 712 (904)
+.
T Consensus 201 ~~ 202 (209)
T 2vkw_A 201 AA 202 (209)
T ss_dssp C-
T ss_pred hh
Confidence 43
No 42
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=99.87 E-value=8e-21 Score=187.07 Aligned_cols=189 Identities=22% Similarity=0.302 Sum_probs=148.3
Q ss_pred CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-------------cCceEEEEcCCCCC
Q psy8771 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-------------DNNQLTTISDLTPH 549 (904)
Q Consensus 483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~L~p~ 549 (904)
.+|.++.+..++.+++.|+|++|...++.+.+|.|+|+..+.. ..|..... .....+.+.+|.|+
T Consensus 3 ~pP~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~--~~w~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~ 80 (214)
T 2ibg_A 3 YPPTPPNVTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGKR--KNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQ 80 (214)
T ss_dssp CCCCCCEEEEEETTEEEEEEEEECCSSCCEEEEEEEEEESSSS--CCCEECSCCEECCSSSCSSSSEEEEEEEECSCCTT
T ss_pred CCCCCCEeeEecCCEEEEEEECCCCCCCCceEEEEEEEECCCC--CcCcccccccCccccccccccCcceeEEecCCcCC
Confidence 4667778888899999999999887778999999999986431 34544321 24567899999999
Q ss_pred CeEEEEEEEEeCCCCCCCCCc-EEEecCCC----CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCC
Q psy8771 550 TIYTIRVQAFTSVGPGPLSAP-VLVKTQQG----VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKP 624 (904)
Q Consensus 550 t~Y~~~V~a~~~~g~~~~S~~-~~~~t~~~----~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p 624 (904)
+.|.|+|+|+|..|.+..|.. ..+.+... .|.+|.++.+...+.+++.|+|.++..
T Consensus 81 t~Y~~~V~A~n~~g~~~~s~~s~~~~~~~~~~~~~~~~P~~~~~~~~~~~sv~l~W~~p~~------------------- 141 (214)
T 2ibg_A 81 HTYRFRILAVYSNNDNKESNTSAKFYLQPGAALDPMPVPELLEIEEYSETAVVLHWSLASD------------------- 141 (214)
T ss_dssp CEEEEEEEEEETTSCEEECCCCCCEECCCSTTSCCCCCCEECCCBCCSSSCEEEEEECCTT-------------------
T ss_pred CEEEEEEEEEecCCCCCCCCCcccEEeccCcCCCCCCCCcccEEEEccCCeEEEEEeCCCc-------------------
Confidence 999999999999998766652 33443333 345688899888899999999999851
Q ss_pred cceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCc-cccceEEec--ccceEEEeCCCCCcEEEEEEEEEcCCCCC
Q psy8771 625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA-KAKHHRRIG--LVETYSLTGLYPNTLYYIWLAAQSPRGEG 701 (904)
Q Consensus 625 ~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~-~~~~~~~~~--~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~ 701 (904)
..++.+.+|.|+|+..+. ..+...... ...+++|.+|.|++.|.|+|+|+|..|.|
T Consensus 142 ---------------------~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g 200 (214)
T 2ibg_A 142 ---------------------ADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSFSAASAS 200 (214)
T ss_dssp ---------------------CCGGGCCEEEEEEEETTCCSCCEEEEEECTTCCEEEECSCCTTCEEEEEEEEECSSCBC
T ss_pred ---------------------cCCCCcceEEEEEEECCCCcceEEeeccCCcceEEEeCCCCCCCEEEEEEEEEcCCccC
Confidence 156788999999988776 344333322 35799999999999999999999999999
Q ss_pred CCCCCeeEEecC
Q psy8771 702 ATTPPIPVRTKQ 713 (904)
Q Consensus 702 ~~s~~~~~~t~~ 713 (904)
.+|..+.++|.+
T Consensus 201 ~~S~~~~~~T~~ 212 (214)
T 2ibg_A 201 EFSALKQGRTQR 212 (214)
T ss_dssp CCCCCEEEECCC
T ss_pred CCcceEeeEecC
Confidence 999999998864
No 43
>2q7n_A Leukemia inhibitory factor receptor; cytokine cell surface receptor complex LIFR LIF, cytokine RE cytokine complex; HET: NAG FUC MAN; 4.00A {Mus musculus}
Probab=99.87 E-value=1.2e-19 Score=197.22 Aligned_cols=457 Identities=14% Similarity=0.147 Sum_probs=263.8
Q ss_pred CCCcceEEEeecCCeEEEEEeCC--CccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 202 VAPLDVKISEVTATSVRLDWTYP--SETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 202 ~~p~~l~~~~~~~~sv~l~W~~~--~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
+.|.+|++...+-....|+|++| .+.-..|.+.+... . ........+.+.|..|.+++ +.|.+....+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--- 75 (488)
T 2q7n_A 5 DDDKDLKCTTNNMRVWDCTWPAPLGVSPGTVKDICIKDR--F---HSCHPLETTNVKIPALSPGD-HEVTINYLNGF--- 75 (488)
T ss_dssp ----CCCCEESSSSEEEEECCCCSSSCCSCEEEEEEESS--S---EEEEECSSSEEEEECCCSSC-EEEEEEESSSC---
T ss_pred CCCccceeEecCceEEEEeeeCcCccCCCceEEEEEecC--C---ceeEEeccceeEcccCCCCc-ceEEEeeccCc---
Confidence 35788888888888999999999 33345677776632 1 11222455789999999998 57777754442
Q ss_pred CCCCCeEEecCCCCC-CCCCCceEeccc-CCCeeEEEecCCCCC-CceeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEE
Q psy8771 280 PPSSPAVITTGETEP-GTAPRDVQVRPL-SSSTMVIQWDEPETP-NGQITAKHHRRIGLVETYSLTGLYPNTLYYIWLAA 356 (904)
Q Consensus 280 ~~s~~~~~~t~~~~p-~~~p~~l~~~~~-~~~~v~l~W~~p~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a 356 (904)
.....+......+ |.+|.+|.+... ....+.|.|..+... ...+ ...|.|+|.-
T Consensus 76 --~~~~~~~~~~~~~~p~~p~~l~~~~~~~~~~l~~~W~~~~~~~~~~~---------------------~~~~~i~v~~ 132 (488)
T 2q7n_A 76 --QSKFTLNEKDVSLIPETPEILDLSADFFTSSLLLKWNDRGSALPHPS---------------------NATWEIKVLQ 132 (488)
T ss_dssp --EEEEEECSTTCEECCCCCCEEECCEETTTTEEEEEECBCGGGSCSSE---------------------EEEEEEECCC
T ss_pred --eeEEEEecCccccCCCCCeeEEEEEecCCCeEEEEEeCCCccccccC---------------------CeEEEEEEEE
Confidence 1112222222221 678999988776 478999999876432 1100 1234444421
Q ss_pred EcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccC--cEEEEEEeeecCCCCCCCCCCcceEee
Q psy8771 357 QSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPN--TLYYIWLAAQSPRGEGATTPPIPVRTK 434 (904)
Q Consensus 357 ~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~y~~~~~~~~~~g~~~~~~~~~~~~~ 434 (904)
.... ..+ ....+... +... .....|..
T Consensus 133 ~~~~------~~~-------------------------~~~~~~~~-~~~~~~~~~w~w~s------------------- 161 (488)
T 2q7n_A 133 NPRT------EPV-------------------------ALVLLNTM-LSGKDTVQHWNWTS------------------- 161 (488)
T ss_dssp SSSS------CSC-------------------------CCEECCEE-CSSSCBCCEEEEEC-------------------
T ss_pred eccc------eEE-------------------------EEEEEEEE-ecCCCceeEeeccC-------------------
Confidence 1000 000 00000000 0000 01111111
Q ss_pred ccCCCCceeeeeccCCeEEEEEEEEee-------CCCCCCCCCCceeeecCC-CCCCCCCCeEEEecCCceEEEEecCCC
Q psy8771 435 QYGKTPGFGEQALYPNTLYYIWLAAQS-------PRGEGATTPPIPVRTKQY-EPGTAPRDVQVRPLSSSTMVIQWDEPE 506 (904)
Q Consensus 435 ~~~~~~~~~~~~L~p~~~Y~~~v~a~~-------~~g~~~~s~~~~~~t~~~-~p~~~p~~l~v~~~~~~~~~l~W~~p~ 506 (904)
...|+ ++.|.++|+... ....|.+|....+..... .....|.+..+. .+ ..+.|......
T Consensus 162 ---------~~pl~-c~~~~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~~t~i~v~P~~~~v~-~G-s~vtl~C~a~~ 229 (488)
T 2q7n_A 162 ---------DLPLQ-CATHSVSIRWHIDSPHFSGYKEWSDWSPLKNISWIRNTETNVFPQDKVVL-AG-SNMTICCMSPT 229 (488)
T ss_dssp ---------SSCCS-SSCCEEEEEEEECCTTCCSCBCCCCCCCCEECCCCCCSSCCEECTTCEEE-SS-CCCEEEECCSS
T ss_pred ---------CCccc-ccceEEEEEEEeccccccCCCCCcCCCChhhcCCcCCCceEECCCCCEEc-CC-CCEEEEEECCC
Confidence 11233 778999999986 222677777766643211 112235555442 33 46666665531
Q ss_pred CCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCC--CeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCC
Q psy8771 507 TPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPH--TIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPR 584 (904)
Q Consensus 507 ~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~--t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~ 584 (904)
+ .|.|...+..... .........+.|.++... ..|.+ .+.+ .+. . ....+. ...+|.+|.
T Consensus 230 ----~----~I~W~~ng~~i~~---~ri~~~~~~L~I~nl~~sd~g~y~~--~C~~-~~~--i-~~~~l~-v~~pP~~P~ 291 (488)
T 2q7n_A 230 ----K----VLSGQIGNTLRPL---IHLYGQTVAIHILNIPVSENSGTNI--IFIT-DDD--V-YGTVVF-AGYPPDVPQ 291 (488)
T ss_dssp ----C----EEEEEETTEECCC---EECSSSCEEEECCSCCCCCSSCEEE--EEEE-SSC--E-EEEEEE-EECCCCCCC
T ss_pred ----C----EEEEEECCEECch---hhccceEEEEEEeCCCcccCCcEEE--EEEc-CCe--E-EEEEEE-eeCCCCCCc
Confidence 1 4556554421111 112234456788888774 34544 3332 111 1 112222 234778899
Q ss_pred CceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcc
Q psy8771 585 DLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK 664 (904)
Q Consensus 585 ~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~ 664 (904)
++.+...+...+.++|.++...+- .+..+..|.|.|+..+..
T Consensus 292 nl~C~~~~~~svtcsW~pg~~~~l--------------------------------------~G~~~t~Y~L~y~~~g~~ 333 (488)
T 2q7n_A 292 KLSCETHDLKEIICSWNPGRITGL--------------------------------------VGPRNTEYTLFESISGKS 333 (488)
T ss_dssp SCEEEBSSSSEEEEEECCCSCCCC--------------------------------------CTTSSCEEEEEETTTCCE
T ss_pred ccEEEEcCCCEEEEEEeCCCcCCC--------------------------------------CCCCceeEEEEEEECCCC
Confidence 999988888999999999865310 011244555554432211
Q ss_pred ccce---EEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCC
Q psy8771 665 AKHH---RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPP 741 (904)
Q Consensus 665 ~~~~---~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~ 741 (904)
.... ...+....+.+..+..++.|.|+|.|.|..|.+. + .+.+.+...+++.||.++++...+.+++.|+|++|.
T Consensus 334 ~~c~~~~~~~~~~~~ct~~l~~~~t~Y~f~V~A~N~~G~~~-S-~~~~~~~~~v~P~PP~nl~v~~~s~~sl~LsW~pP~ 411 (488)
T 2q7n_A 334 AVFHRIEGLTNETYRLGVQMHPGQEIHNFTLTGRNPLGQAQ-S-AVVINVTERVAPHDPTSLKVKDINSTVVTFSWYLPG 411 (488)
T ss_dssp EEEECSSCCCSSCEEEEEECCSSCCCCEEEEEEEETTEEEE-E-EEECCGGGTBCCCCCEEEEEEECSTTCEEEEEEEEE
T ss_pred CCCccccccCCceEEEEEcCCCCccEEEEEEEEEeCCCCcc-c-eEEEEecCCCCCCCCeEEEEEecCCCEEEEEEeCCC
Confidence 1000 0012234566655544699999999999998843 4 456666665666689999999889999999999994
Q ss_pred CCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceE--EecCCCCCceEEEEEEEeeCCCC---CCCCCcEEeecCCC
Q psy8771 742 VERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSF--VLDELKKWTEYRIWVLAGTSIGD---GPSSYPITIRTHED 814 (904)
Q Consensus 742 ~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~--~i~~L~p~t~Y~~~V~a~~~~g~---g~~s~~~~~~t~~~ 814 (904)
..++.+..|+|+|+..+...+........ ....+ .|.+|+|++.|.|+|+|.+ .|. |++|.++.++|.++
T Consensus 412 --~~~g~~l~YeV~Yr~~~~~~w~~~~~~~~~~~~~~~v~l~~L~P~T~Y~~rVRA~~-~g~G~WS~WS~~v~~~T~e~ 487 (488)
T 2q7n_A 412 --NFTKINLLCQIEICKANSKKEVRNATIRGAEDSTYHVAVDKLNPYTAYTFRVRCSS-KTFWKWSRWSDEKRHLTTEA 487 (488)
T ss_dssp --ECSSSEEEEEEEEBCTTSCCEEEEEEEECCEEEEEEEEECSCCSSCCBBCCEEEEE-SSCSSCCCCCCCCCBCCCCC
T ss_pred --CCCCcceEEEEEEEECCCCCceEEEEEecCCCcEEEEEeCCCCCCceEEEEEEEEE-CCCCCCCCCcCCEeEECCCC
Confidence 35788999999999876543321111111 23455 9999999999999999999 887 58888888988654
No 44
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.86 E-value=1.1e-20 Score=183.59 Aligned_cols=185 Identities=21% Similarity=0.341 Sum_probs=152.6
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEe-ecCceEEEEcCCCCCCeEEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQV-VDNNQLTTISDLTPHTIYTIRVQ 557 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~ 557 (904)
.+|.+|.++.+...+.+++.|+|++|...++ .+.+|.|+|+..+. ..|.... ....+.+.+.+|.|++.|.|+|+
T Consensus 4 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~ 80 (197)
T 3lpw_A 4 DTPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTR---KAYSTVATNCHKTSWKVDQLQEGCSYYFRVL 80 (197)
T ss_dssp CSCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTC---SSCEEEEEEECSSEEEECCCCTTCEEEEEEE
T ss_pred CCCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCC---CccEEeecCCCccEEEEcCCCCCCEEEEEEE
Confidence 3457899999999999999999999865555 58999999998763 3454443 35778899999999999999999
Q ss_pred EEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceE
Q psy8771 558 AFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAV 637 (904)
Q Consensus 558 a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~ 637 (904)
|.|..|.+.++....+.+....|.+|.++.+...+.+++.|+|.++...
T Consensus 81 a~~~~g~~~~s~~~~~~t~~~~p~~p~~~~~~~~~~~~v~l~W~~p~~~------------------------------- 129 (197)
T 3lpw_A 81 AENEYGIGLPAETAESVKASERPLPPGKITLMDVTRNSVSLSWEKPEHD------------------------------- 129 (197)
T ss_dssp EEETTEECCCEECSSCEESCCCCCCCSCEEEEEECSSCEEEEECCCSCC-------------------------------
T ss_pred EEcCccccCCCCCccceecCCCCCCCcccEEEeccCCeEEEEecCCCcC-------------------------------
Confidence 9999998887766666777778889999999988999999999987641
Q ss_pred EEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCe
Q psy8771 638 TLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPI 707 (904)
Q Consensus 638 ~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~ 707 (904)
+++.+.+|.|+|+..+...+.........++.+.+|.|++.|.|+|+|+|..|.|.+|...
T Consensus 130 ---------~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~s 190 (197)
T 3lpw_A 130 ---------GGSRILGYIVEMQTKGSDKWATCATVKVTEATITGLIQGEEYSFRVSAQNEKGISDPRQLS 190 (197)
T ss_dssp ---------TTSCCCEEEEEEEETTCSCCEEEEEESSSEEEECCCCTTCEEEEEEEEEETTEECCCEECS
T ss_pred ---------CCCcccEEEEEEEeCCCCceEEeecccccEEEeCCcCCCCEEEEEEEEEeCCccCCCccCc
Confidence 2347889999999877666655555667899999999999999999999999998876543
No 45
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.86 E-value=2.4e-20 Score=195.41 Aligned_cols=246 Identities=21% Similarity=0.321 Sum_probs=182.3
Q ss_pred CCCCCcEEEeccCCceEEEEeCCCC--------------CCC--ceecccccccccceEEEEeeeccCCeeeeeeeeccC
Q psy8771 35 TAPRDVQVRPLSSSTMVIQWDEPET--------------PNG--QITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVAD 98 (904)
Q Consensus 35 ~~p~~l~~~~~~~~s~~v~W~~~~~--------------~~g--~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~ 98 (904)
+....|.|...+.+...|.|.+... ++| .+....+...+.....|...+..+.....+.+.+..
T Consensus 19 G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 98 (305)
T 2nzi_A 19 QSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEV 98 (305)
T ss_dssp TCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEECE
T ss_pred CCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEcCCCCccceEEEEEec
Confidence 3667777877778889999976521 122 233333444455555555554433333444555432
Q ss_pred CCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEee-e--cCCeEE
Q psy8771 99 PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDR-V--TESENY 171 (904)
Q Consensus 99 ~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~-l--~d~g~Y 171 (904)
......|.+...+.. +.+..|+.+.|.|.+.|.|.|.|.|+++ +..+....++.+ ...+|.|.+ + +|.|.|
T Consensus 99 ~p~~~~~~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y 176 (305)
T 2nzi_A 99 PAKIHLPKTLEGMGA-VHALRGEVVSIKIPFSGKPDPVITWQKG-QDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFY 176 (305)
T ss_dssp EEEECCCHHHHSSCC-EEEETTCCEEEEEEEEEESCCEEEEEES-SSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEE
T ss_pred CCccCCCcccccccc-EEecCCCEEEEEEEECCCCCCEEEEEEC-CEECCCCCcEEEEEcCCceEEEEecCCccCccEEE
Confidence 212222222333345 8889999999999999999999999999 777766655553 456899998 7 699999
Q ss_pred EEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC----CccceEEEEEEEeCCCCCCeEEe
Q psy8771 172 TCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP----SETLLYYVIQYKPKAANTPYSEI 247 (904)
Q Consensus 172 ~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~----~~~~~~y~v~~~~~~~~~~~~~~ 247 (904)
+|.|.|..|..+..+.|.|. ..|.+|.++.+......++.|+|..+ +..+..|.+++++.. ...|...
T Consensus 177 ~C~a~N~~G~~~~~~~l~v~-------~~P~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~~~~~~-~~~w~~~ 248 (305)
T 2nzi_A 177 VVCAKNRFGIDQKTVELDVA-------DVPDPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVEKCATT-AERWLRV 248 (305)
T ss_dssp EEEEEETTEEEEEEEEEEEE-------BCCCCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEEEEETT-SCCEEEE
T ss_pred EEEEEeCCCceeeEEEEEEe-------cCCCCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEEEecCC-CCccEEC
Confidence 99999999999999999998 88999999999989999999999986 457889999999874 3455554
Q ss_pred ecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecC
Q psy8771 248 SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTG 290 (904)
Q Consensus 248 ~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~ 290 (904)
.......+.|.+|.+++.|.|+|+|.|..|.+.++......+.
T Consensus 249 ~~~~~~~~~i~~l~~~~~y~~~~~A~N~~G~~~~S~~~~~~~t 291 (305)
T 2nzi_A 249 GQARETRYTVINLFGKTSYQFRVIAENKFGLSKPSEPSEPTIT 291 (305)
T ss_dssp EEESSSEEEECSCCSSCEEEEEEEEEETTEECCCCCCCCCEEC
T ss_pred ccccCceEEecCCCCCCeEEEEEEEEeCCcccCCcCCCCCEEc
Confidence 4444688999999999999999999999999988877654443
No 46
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=99.86 E-value=1.9e-20 Score=181.81 Aligned_cols=183 Identities=21% Similarity=0.308 Sum_probs=150.4
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCC-ceeeEEEEEEeCCccccceEE-ecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGE-NIISYELYWNDTYAKAKHHRR-IGLVETYSLTGLYPNTLYYIWLAAQSP 697 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~-~~~~y~v~~~~~~~~~~~~~~-~~~~~~~~l~~L~p~t~Y~v~V~a~~~ 697 (904)
.|.+|.+|++...+.+++.|+|.++...++ .+.+|.|+|+..+...+.... ......+.+.+|.|++.|.|+|+|+|.
T Consensus 5 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~ 84 (197)
T 3lpw_A 5 TPGPPQDLKVKEVTKTSVTLTWDPPLLDGGSKIKNYIVEKRESTRKAYSTVATNCHKTSWKVDQLQEGCSYYFRVLAENE 84 (197)
T ss_dssp SCCCCEEEEEEEECSSCEEEEEECCSCCTTSCCCEEEEEEEETTCSSCEEEEEEECSSEEEECCCCTTCEEEEEEEEEET
T ss_pred CCCCCCCcEEEEecCCEEEEEEcCCccCCCCcccEEEEEEEECCCCccEEeecCCCccEEEEcCCCCCCEEEEEEEEEcC
Confidence 578899999999999999999999864444 599999999988766554333 445679999999999999999999999
Q ss_pred CCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceE
Q psy8771 698 RGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSF 777 (904)
Q Consensus 698 ~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~ 777 (904)
.|.+.++....+.+....|. +|.++.+...+.+++.|+|.+|.. ..++.+.+|.|+|+..+...+ ........+.+
T Consensus 85 ~g~~~~s~~~~~~t~~~~p~-~p~~~~~~~~~~~~v~l~W~~p~~-~~~~~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~ 160 (197)
T 3lpw_A 85 YGIGLPAETAESVKASERPL-PPGKITLMDVTRNSVSLSWEKPEH-DGGSRILGYIVEMQTKGSDKW--ATCATVKVTEA 160 (197)
T ss_dssp TEECCCEECSSCEESCCCCC-CCSCEEEEEECSSCEEEEECCCSC-CTTSCCCEEEEEEEETTCSCC--EEEEEESSSEE
T ss_pred ccccCCCCCccceecCCCCC-CCcccEEEeccCCeEEEEecCCCc-CCCCcccEEEEEEEeCCCCce--EEeecccccEE
Confidence 99988877667777777666 689999998999999999999852 233489999999998765443 21222278899
Q ss_pred EecCCCCCceEEEEEEEeeCCCCCCCCCc
Q psy8771 778 VLDELKKWTEYRIWVLAGTSIGDGPSSYP 806 (904)
Q Consensus 778 ~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~ 806 (904)
++.+|.+++.|.|+|+|.|..|.|++|..
T Consensus 161 ~~~~L~p~t~Y~~~V~A~n~~G~s~~S~~ 189 (197)
T 3lpw_A 161 TITGLIQGEEYSFRVSAQNEKGISDPRQL 189 (197)
T ss_dssp EECCCCTTCEEEEEEEEEETTEECCCEEC
T ss_pred EeCCcCCCCEEEEEEEEEeCCccCCCccC
Confidence 99999999999999999999999887654
No 47
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.85 E-value=5.3e-20 Score=181.33 Aligned_cols=180 Identities=18% Similarity=0.309 Sum_probs=147.8
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC--Cceee----cceEEEEeee--cCCeEEE
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD--DKLPV----GRNVLTLDRV--TESENYT 172 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~--~~~~~----~~~~l~i~~l--~d~g~Y~ 172 (904)
...||.|. .|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+... .++.+ ..+.|.|.++ +|.|.|+
T Consensus 16 ~~~~P~~~-~p~~-~~~~~G~~v~l~C~~~g~p~p~i~W~~~-g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 92 (215)
T 3mtr_A 16 HMYAPKLQ-GPVA-VYTWEGNQVNITCEVFAYPSATISWFRD-GQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYN 92 (215)
T ss_dssp CCEEEEEE-CCSE-EEECTTCCEEEEEEEEEESCCEEEEEET-TEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEE
T ss_pred eecCCccc-CCce-EEEECCCCEEEEEEEeecCCCEEEEEEC-CeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEE
Confidence 46788884 6666 9999999999999999999999999999 6666554 34443 3578999999 6999999
Q ss_pred EEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC----CccceEEEEEEEeCCCCCCeEEee
Q psy8771 173 CIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP----SETLLYYVIQYKPKAANTPYSEIS 248 (904)
Q Consensus 173 c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~----~~~~~~y~v~~~~~~~~~~~~~~~ 248 (904)
|.|.|..|.....+.|.|. ..|.+|..+.+ .....++.|+|..+ +.++..|.|+|+..+.........
T Consensus 93 C~a~n~~g~~~~~~~l~v~-------~~P~~p~~~~~-~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~ 164 (215)
T 3mtr_A 93 CTAVNRIGQESLEFILVQA-------DTPSSPSIDQV-EPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWY 164 (215)
T ss_dssp EEEECSSCEEEEEEEEEEC-------CCCCCCEEEEE-EEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEE
T ss_pred EEEEECCCceEEEEEEEEC-------CCCCCCcceEE-EEecceEEEEEecCCccCCCceEEEEEEEEECCCCccccccc
Confidence 9999999999999999888 88999988877 46678999999865 557889999999876543332211
Q ss_pred ----cceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCC
Q psy8771 249 ----GIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE 291 (904)
Q Consensus 249 ----~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~ 291 (904)
......+.|.+|.+++.|.|+|.|.|..|.+.++..+.+.+.+
T Consensus 165 ~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p 211 (215)
T 3mtr_A 165 DAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 211 (215)
T ss_dssp EHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred ccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence 1223789999999999999999999999999999988887643
No 48
>3bpo_C Interleukin-13 receptor alpha-1 chain; IL4, IL13, IL4R, IL13R, cytokine, glycoprotein, IM response, membrane, phosphoprotein, secreted; HET: NAG; 3.00A {Homo sapiens} PDB: 3bpn_C*
Probab=99.85 E-value=2e-19 Score=188.14 Aligned_cols=226 Identities=12% Similarity=0.126 Sum_probs=150.9
Q ss_pred eeeeccCCeEEEEEEEEee-CCCCCCCCCCcee--eecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEE
Q psy8771 443 GEQALYPNTLYYIWLAAQS-PRGEGATTPPIPV--RTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYY 519 (904)
Q Consensus 443 ~~~~L~p~~~Y~~~v~a~~-~~g~~~~s~~~~~--~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~ 519 (904)
.+.+|.++..|.|+|+|.+ ..+.+..+..... .+....|+.+|.++.+...+.+.+.++|+++.+. +.+.+|.|+|
T Consensus 56 ~~~~~~~~~~y~~~V~a~~~~~~~g~~s~~~~~~~~~~~~~pp~~P~~l~c~~~~~~~~~c~W~~~~~~-~~~~~Y~l~y 134 (314)
T 3bpo_C 56 RSIEVPLNERICLQVGSQCSTNESEKPSILVEKCISPPEGDPESAVTELQCIWHNLSYMKCSWLPGRNT-SPDTNYTLYY 134 (314)
T ss_dssp EEEECCCSSCEEEEEEECC---------CCEEEEECCCCC-CCSSCEEEEEEEETTTEEEEEEECCC----CCCCEEEEE
T ss_pred EEEEEcCCCcEEEEEEEEecCCCCCCCCcCeeeeeecCCCCCCCCCEeceEEECCCCeEEEEECCCCCC-CCCccEEEEE
Confidence 4567888999999999965 4555555665542 2345567789999999988889999999998754 4578999998
Q ss_pred EeCCCCCCcceEEE-eecCceEEEEcCCCC----CCeEEEEEEEEeCCCCCCCCCcEEEecCC-CCCCCCCCceEEecCC
Q psy8771 520 TQDQSLPMSAWETQ-VVDNNQLTTISDLTP----HTIYTIRVQAFTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDIQE 593 (904)
Q Consensus 520 ~~~~~~~~~~~~~~-~~~~~~~~~~~~L~p----~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~~~ 593 (904)
+..+......+... .......+.+..+.+ .+.|.|+|.|.|..|.+..+ ...+.... ..|.+|.++++. ...
T Consensus 135 ~~~~~~~~~~C~~~~~~~~~~~c~~~~~~~~~~~~~~y~~~V~a~n~~G~~~~~-~~~~~~~~~v~P~pP~~l~~~-~~~ 212 (314)
T 3bpo_C 135 WHRSLEKIHQCENIFREGQYFGCSFDLTKVKDSSFEQHSVQIMVKDNAGKIKPS-FNIVPLTSRVKPDPPHIKNLS-FHN 212 (314)
T ss_dssp EESSCSSCEECCCEEEETTEEEEEEECCC--------CCEEEEEEETTSCSCCE-EEEECSSSSEECCCCEEEEEE-EET
T ss_pred EeCCCCccccCcCeecCCCeEEEEECCCCccccceeEEEEEEEEEcCCCceecc-cEEEehhheEeeCCCCEEEEE-EcC
Confidence 87643221122111 123456678877763 78999999999998877543 34554433 357889999887 677
Q ss_pred CeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEe--
Q psy8771 594 TAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRI-- 671 (904)
Q Consensus 594 ~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~-- 671 (904)
+++.|+|.+|.. .++.+..|.|+|+..+...+.....
T Consensus 213 ~~l~lsW~~P~~-----------------------------------------~~~~~l~Yev~y~~~~~~~w~~~~~~~ 251 (314)
T 3bpo_C 213 DDLYVQWENPQN-----------------------------------------FISRCLFYEVEVNNSQTETHNVFYVQE 251 (314)
T ss_dssp TEEEEEEECCTT-----------------------------------------CCGGGEEEEEEEEC--CCCEEEEEESC
T ss_pred CcEEEEEeCCCc-----------------------------------------cCCceEEEEEEEEECCCCcceEEeccc
Confidence 899999999853 2344688999998876655432221
Q ss_pred ------------cccceEEEeCCCCCcEEEEEEEEEcC------CC-CCCCCCCeeEEec
Q psy8771 672 ------------GLVETYSLTGLYPNTLYYIWLAAQSP------RG-EGATTPPIPVRTK 712 (904)
Q Consensus 672 ------------~~~~~~~l~~L~p~t~Y~v~V~a~~~------~G-~~~~s~~~~~~t~ 712 (904)
.....+.|.+|+|++.|.|+|+|.+. .| .|.+|..+.+.+.
T Consensus 252 ~~c~~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVra~~~~~~~~~~g~WS~WS~~~~~~~~ 311 (314)
T 3bpo_C 252 AKCENPEFERNVENTSCFMVPGVLPDTLNTVRIRVKTNKLCYEDDKLWSNWSQEMSIGKK 311 (314)
T ss_dssp CCCCCTTSSCCCSSEEEEEEESCCTTSCEEEEEEEEECTTTSCCCCCCCCCCCCEEESCC
T ss_pred ccccccccccccCCceEEEEccCCCCCEEEEEEEeeecccccCCCCeeCCCCCCeEeccc
Confidence 34568999999999999999999984 45 3677777766443
No 49
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.84 E-value=1.6e-19 Score=175.41 Aligned_cols=174 Identities=24% Similarity=0.424 Sum_probs=138.0
Q ss_pred CCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEE
Q psy8771 577 QGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYEL 656 (904)
Q Consensus 577 ~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v 656 (904)
..+| +|.++.+...+.+++.|+|.++. ++.+.+|.|
T Consensus 21 ~~~P-~P~~l~~~~~~~~sv~lsW~~p~-------------------------------------------~~~i~~Y~v 56 (203)
T 2gee_A 21 MEVP-QPTDLSFVDITDSSIGLRWTPLN-------------------------------------------SSTIIGYRI 56 (203)
T ss_dssp SCCC-CCEEEEEECCTTTCEEEEEECCS-------------------------------------------SSSCCEEEE
T ss_pred ccCc-CCCccEEEecCCCEEEEEecCCC-------------------------------------------CCCccEEEE
Confidence 3455 68888888888888888888873 356889999
Q ss_pred EEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEE
Q psy8771 657 YWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIR 734 (904)
Q Consensus 657 ~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~ 734 (904)
+|+..+.... ..........+.|.+|.|++.|.|+|+|++..|.+. ...+.+...+| +|.++.+...+.+++.
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~---~~~~~t~~~~p--~P~~l~~~~~~~~sv~ 131 (203)
T 2gee_A 57 TVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGGEST---PTTLTQQTAVP--PPTDLRFTNIGPDTMR 131 (203)
T ss_dssp EEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEESSSCBCC---CEEEEEECCCC--CCEEEEEEEEETTEEE
T ss_pred EEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEEEEEEEEeCCCccc---cEeeeecCCCc--CCCceEEEEcCCCEEE
Confidence 9988765543 223345677999999999999999999999887654 45566666555 5899999999999999
Q ss_pred EEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCC
Q psy8771 735 ISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSS 804 (904)
Q Consensus 735 l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s 804 (904)
|+|++|. ++.+.+|.|+|+...+... .....+. ..+.++|.+|+|++.|.|+|+|.+..|.|+++
T Consensus 132 l~W~~p~----~~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 197 (203)
T 2gee_A 132 VTWAPPP----SIDLTNFLVRYSPVKNEED-VAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL 197 (203)
T ss_dssp EEEECCS----SCCCSEEEEEEEETTCGGG-CEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred EEEcCCC----CCCccEEEEEEEECCCCCc-cEEEEcCCCcCEEEECCCCCCCEEEEEEEEecCCCcCCCe
Confidence 9999984 4679999999998654322 2334445 88999999999999999999999998887654
No 50
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.84 E-value=9.5e-20 Score=174.69 Aligned_cols=181 Identities=23% Similarity=0.374 Sum_probs=137.6
Q ss_pred ccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771 618 NDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP 697 (904)
Q Consensus 618 ~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~ 697 (904)
...+.+|.+|++..++.+++.|+|.++ .+.+.+|.|+|+..++............++.|.+|+|++.|.|+|+|++.
T Consensus 4 ~t~p~~P~~l~~~~~~~~sv~l~W~~p---~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~ 80 (186)
T 1qr4_A 4 GTDLDNPKDLEVSDPTETTLSLRWRRP---VAKFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTEYTISLVAEKG 80 (186)
T ss_dssp ----CCCEEEEEESCCSSEEEEEEECC---SSCCSEEEEEEECTTCCEEEEEECTTCSEEEEESCCSSCEEEEEEEEESS
T ss_pred cCCCcCCCceEEEecCCCEEEEEEeCC---CCCccEEEEEEEeCCCCeeEEECCCCCCEEEECCCCCCCEEEEEEEEEcC
Confidence 346789999999999999999999986 34789999999965433333333445679999999999999999999997
Q ss_pred CCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-Ccce
Q psy8771 698 RGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTS 776 (904)
Q Consensus 698 ~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~ 776 (904)
.|.+.+. .+.+.|. |. +|.++.+...+.+++.|+|++|. +.+.+|.|+|+..++.. .....+. ..+.
T Consensus 81 ~~~s~~~-~~~~~t~---p~-~P~~l~~~~~~~~sv~l~W~~p~-----~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~ 148 (186)
T 1qr4_A 81 RHKSKPT-TIKGSTV---VG-SPKGISFSDITENSATVSWTPPR-----SRVDSYRVSYVPITGGT--PNVVTVDGSKTR 148 (186)
T ss_dssp SCBCCCE-EEEEECC---CC-CCSCEEEESCCSSCEEEEECCCS-----SCCSEEEEEEEETTCCC--CEEEEEETTCCE
T ss_pred CccCCCE-EEEEECC---CC-CCCccEEEEeCCCEEEEEEECCC-----CcccEEEEEEEeCCCCC--ceEEEcCCCcCE
Confidence 6655432 3444453 33 67899999999999999999883 56999999999876532 2344455 8899
Q ss_pred EEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771 777 FVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814 (904)
Q Consensus 777 ~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~ 814 (904)
++|.+|.|++.|.|+|+|.+..|.|... ...++|.++
T Consensus 149 ~~i~~L~p~t~Y~~~V~A~~~~g~s~p~-~~~~~T~pd 185 (186)
T 1qr4_A 149 TKLVKLVPGVDYNVNIISVKGFEESEPI-SGILKTALD 185 (186)
T ss_dssp EEECSCCSSCEEEEEEEEEETTEECCCE-EEEEEC---
T ss_pred EEEcCCCCCCEEEEEEEEEcCCCcCcCE-EEEEEecCC
Confidence 9999999999999999999988877643 355667543
No 51
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.83 E-value=7.5e-20 Score=180.19 Aligned_cols=192 Identities=20% Similarity=0.257 Sum_probs=144.7
Q ss_pred CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEE
Q psy8771 579 VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW 658 (904)
Q Consensus 579 ~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~ 658 (904)
+|.+|.+|.+...+.+++.|+|.++.. .+ ...+|.|+|
T Consensus 7 pP~~P~~l~~~~~~~~sv~l~W~~p~~-----------------------------------------~~-~~~~Y~v~~ 44 (215)
T 1bqu_A 7 PPEKPKNLSCIVNEGKKMRCEWDGGRE-----------------------------------------TH-LETNFTLKS 44 (215)
T ss_dssp CCCCCEEEEEEEETTSCCEEEEECCSC-----------------------------------------CS-SCCEEEEEE
T ss_pred CCCCCEeeEeEECCCCcEEEEcCCCCC-----------------------------------------CC-CCceEEEEE
Confidence 566777777777777778888877753 32 347899988
Q ss_pred EeCCccccce-EEecccceEEEeCC-CCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEec--CCCEEE
Q psy8771 659 NDTYAKAKHH-RRIGLVETYSLTGL-YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL--SSTSIR 734 (904)
Q Consensus 659 ~~~~~~~~~~-~~~~~~~~~~l~~L-~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~--~~~~v~ 734 (904)
+..+...... ........+.|.+| .+++.|.|+|.|.|..|.+. +....+.+....+..+|.++.+... +.+++.
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~i~~L~~~~t~Y~~~V~A~n~~G~~~-s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~ 123 (215)
T 1bqu_A 45 EWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAENALGKVT-SDHINFDPVYKVKPNPPHNLSVINSEELSSILK 123 (215)
T ss_dssp EETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEEEETTEEEE-CCCEEECGGGSEECCCCEEEEEECC--CCSCEE
T ss_pred EEcCCCccccccccCCcceEEEcCCccccccEEEEEEEEecccCcc-CCcEEecccccCcCCCCCceEEEEecCCCceEE
Confidence 8764332211 12234579999999 99999999999999999876 4456666555545557899988765 779999
Q ss_pred EEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEe---c-CcceEEecCCCCCceEEEEEEEeeCCCCCC---CCCcE
Q psy8771 735 ISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTL---K-NQTSFVLDELKKWTEYRIWVLAGTSIGDGP---SSYPI 807 (904)
Q Consensus 735 l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~---~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~---~s~~~ 807 (904)
|+|++|. ..+|.+.+|+|+|+..+...+ ..... . ..+.++|.+|.+++.|.|+|+|.|..|.|. +|.++
T Consensus 124 l~W~~p~--~~~~~i~~Y~v~y~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~ 199 (215)
T 1bqu_A 124 LTWTNPS--IKSVIILKYNIQYRTKDASTW--SQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEA 199 (215)
T ss_dssp EEEECCG--GGGTSCEEEEEEEEETTCSSC--EECCGGGGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCE
T ss_pred EEEeCCC--CCCcceEEEEEEEccCCCCCc--eEeccccccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCcc
Confidence 9999985 457789999999998764333 22221 3 678999999999999999999999998865 67788
Q ss_pred EeecCCCCCC
Q psy8771 808 TIRTHEDDPS 817 (904)
Q Consensus 808 ~~~t~~~~P~ 817 (904)
.++|.+++|+
T Consensus 200 ~~~T~~~~P~ 209 (215)
T 1bqu_A 200 SGITYEDRPS 209 (215)
T ss_dssp EEEECCCHHH
T ss_pred cccccccCCc
Confidence 8999887763
No 52
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=99.83 E-value=3.7e-19 Score=185.49 Aligned_cols=228 Identities=18% Similarity=0.210 Sum_probs=160.1
Q ss_pred ceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEe
Q psy8771 538 NQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW 617 (904)
Q Consensus 538 ~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~ 617 (904)
...+.|.++... .-.+.+.|.+. |...............+|.+|.++.+...+.+++.|+|.++.+
T Consensus 64 ~~~L~i~~~~~~-~g~Y~C~a~~~-g~~~~~~~~~~l~v~~~P~~P~~l~~~~~~~~~v~l~W~~~~~------------ 129 (303)
T 1i1r_A 64 ASSVTFTDIASL-NIQLTCNILTF-GQLEQNVYGITIISGLPPEKPKNLSCIVNEGKKMRCEWDGGRE------------ 129 (303)
T ss_dssp EEEEEECSCCCS-EEEEEEEEEET-TTEEEEEEEEEEEEECCCCCCEEEEEEEETTSCCEEEEECCSC------------
T ss_pred EEEEEEcCcCCC-ceEEEEecccC-CCcceEEEEEEEeccCCCCCCeeeEEEECCCCcEEEEccCCCC------------
Confidence 346788888764 23344555553 3211111111112234678889999888777899999998864
Q ss_pred ccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE-EecccceEEEeCC-CCCcEEEEEEEEE
Q psy8771 618 NDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR-RIGLVETYSLTGL-YPNTLYYIWLAAQ 695 (904)
Q Consensus 618 ~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~l~~L-~p~t~Y~v~V~a~ 695 (904)
. +...+|.|+|+......+... ......++.|.+| .|++.|.|+|.|.
T Consensus 130 -----------------------------~-~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~~p~t~Y~f~V~A~ 179 (303)
T 1i1r_A 130 -----------------------------T-HLETNFTLKSEWATHKFADCKAKRDTPTSCTVDYSTVYFVNIEVWVEAE 179 (303)
T ss_dssp -----------------------------C-SSCCEEEEEEEETTEECCCEECCSSCTTEEECSSCCCTTSCEEEEEEEE
T ss_pred -----------------------------C-CCCcCEEEEEEecCCCCccCCCcCCCceEEEECCcCcccccEEEEEEEE
Confidence 2 235688888876543322111 2234578999999 9999999999999
Q ss_pred cCCCCCCCCCCeeEEecCCCCCCCCCCcEEEec--CCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEe--
Q psy8771 696 SPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL--SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTL-- 771 (904)
Q Consensus 696 ~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~--~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~-- 771 (904)
|..|.+.. ....+.+....++.||.++.+... +.+++.|+|++|. ..+|.+.+|+|+|+..+...+ .....
T Consensus 180 N~~G~~~s-~~~~~~~~~~~~p~pP~~~~v~~~~~~~~sv~l~W~~p~--~~~~~i~~Y~v~y~~~~~~~w--~~~~~~~ 254 (303)
T 1i1r_A 180 NALGKVTS-DHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPS--IKSVIILKYNIQYRTKDASTW--SQIPPED 254 (303)
T ss_dssp ETTEEEEC-CCEEECGGGGEECCCCEEEEEECCSSSSSCEEEEEECCG--GGGTSCEEEEEEEEETTCSSC--EECCGGG
T ss_pred cCCCCccc-CCEEECHHHeEecCCCcceEEEEecCCCCEEEEEECCCC--CCCcccEEEEEEEEeCCCCCc--eEEcccc
Confidence 99998753 345555554445568888888754 6799999999995 457889999999999864433 22221
Q ss_pred -c-CcceEEecCCCCCceEEEEEEEeeCCCCCCC---CCcEEeecCCC
Q psy8771 772 -K-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPS---SYPITIRTHED 814 (904)
Q Consensus 772 -~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~---s~~~~~~t~~~ 814 (904)
. ..+.+.|.+|.+++.|.|+|+|.|..|.|.+ |+++.++|.++
T Consensus 255 ~~~~~~~~~l~~L~p~t~Y~~rV~A~n~~G~G~~S~wS~~~~~~T~e~ 302 (303)
T 1i1r_A 255 TASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEASGITYED 302 (303)
T ss_dssp GCSCCSEEEECSCCTTCEEEEEEEEEETTSCSCCCCCCCCEEEECCCC
T ss_pred CCCceeEEEeCCCCCCCEEEEEEEeccCCCCCCcCCCCCccceeCCcC
Confidence 2 5678999999999999999999999988765 56788888764
No 53
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=99.83 E-value=3.6e-20 Score=182.48 Aligned_cols=196 Identities=15% Similarity=0.206 Sum_probs=150.0
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCC-CCCCeEEEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDL-TPHTIYTIRVQA 558 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L-~p~t~Y~~~V~a 558 (904)
.||.+|.+|++...+.+++.|+|+++.+.++ ..+|.|+|+...+.. ..+ .......+.+.+.+| .+++.|.|+|+|
T Consensus 6 ~pP~~P~~l~~~~~~~~sv~l~W~~p~~~~~-~~~Y~v~~~~~~~~~-~~~-~~~~~~~~~~~i~~L~~~~t~Y~~~V~A 82 (215)
T 1bqu_A 6 LPPEKPKNLSCIVNEGKKMRCEWDGGRETHL-ETNFTLKSEWATHKF-ADC-KAKRDTPTSCTVDYSTVYFVNIEVWVEA 82 (215)
T ss_dssp CCCCCCEEEEEEEETTSCCEEEEECCSCCSS-CCEEEEEEEETTEEC-CCE-ECCSSCTTEEECSSCCCTTSCEEEEEEE
T ss_pred CCCCCCEeeEeEECCCCcEEEEcCCCCCCCC-CceEEEEEEEcCCCc-ccc-ccccCCcceEEEcCCccccccEEEEEEE
Confidence 5678999999998888999999999876654 479999998764211 111 112245678999999 999999999999
Q ss_pred EeCCCCCCCCCcEEEecCC-CCCCCCCCceEEec--CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccc
Q psy8771 559 FTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDI--QETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQET 635 (904)
Q Consensus 559 ~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~--~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~ 635 (904)
.|..|.+. +....+.+.. ..|.+|.++.+... +.+++.|+|.++..
T Consensus 83 ~n~~G~~~-s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~sv~l~W~~p~~------------------------------ 131 (215)
T 1bqu_A 83 ENALGKVT-SDHINFDPVYKVKPNPPHNLSVINSEELSSILKLTWTNPSI------------------------------ 131 (215)
T ss_dssp EETTEEEE-CCCEEECGGGSEECCCCEEEEEECC--CCSCEEEEEECCGG------------------------------
T ss_pred EecccCcc-CCcEEecccccCcCCCCCceEEEEecCCCceEEEEEeCCCC------------------------------
Confidence 99999875 5555555433 35678888888765 67899999998864
Q ss_pred eEEEeccCCCCCCCceeeEEEEEEeCCccccceEE----ecccceEEEeCCCCCcEEEEEEEEEcCCCCCC---CCCCee
Q psy8771 636 AVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRR----IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGA---TTPPIP 708 (904)
Q Consensus 636 ~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~----~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~---~s~~~~ 708 (904)
.++.+.+|.|+|+..+...+.... ......++|.+|.|++.|.|+|+|+|..|.|. +|..+.
T Consensus 132 -----------~~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~g~~S~~S~~~~ 200 (215)
T 1bqu_A 132 -----------KSVIILKYNIQYRTKDASTWSQIPPEDTASTRSSFTVQDLKPFTEYVFRIRCMKEDGKGYWSDWSEEAS 200 (215)
T ss_dssp -----------GGTSCEEEEEEEEETTCSSCEECCGGGGCSCCSEEEECSCCSSEEEEEEEEEEETTSCSCCCCCCCCEE
T ss_pred -----------CCcceEEEEEEEccCCCCCceEeccccccCccceEEeCCCCCCCEEEEEEEEccCCCCCccCCCCCccc
Confidence 456788999999987655443322 34567999999999999999999999988865 667788
Q ss_pred EEecCCCCCCCC
Q psy8771 709 VRTKQYVPGAPP 720 (904)
Q Consensus 709 ~~t~~~~p~~~P 720 (904)
++|.+.+|..+|
T Consensus 201 ~~T~~~~P~~~p 212 (215)
T 1bqu_A 201 GITYEDRPSKEP 212 (215)
T ss_dssp EEECCCHHHHHH
T ss_pred ccccccCCcCCC
Confidence 899887765443
No 54
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.83 E-value=1.1e-19 Score=176.73 Aligned_cols=175 Identities=17% Similarity=0.282 Sum_probs=136.3
Q ss_pred CCCcceEEEeec--cceEEEeccCCCCCCCceeeEEEEEEeCCc-cccceE-EecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771 622 AKPRDLRAVDIQ--ETAVTLAWSKPTHSGENIISYELYWNDTYA-KAKHHR-RIGLVETYSLTGLYPNTLYYIWLAAQSP 697 (904)
Q Consensus 622 ~~p~~l~~~~~~--~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~-~~~~~~-~~~~~~~~~l~~L~p~t~Y~v~V~a~~~ 697 (904)
.+|.+|++..++ .+++.|+|.++ .++.+.+|.|+|+..+. ..+... ......++.|.+|+|++.|.|+|+|+|.
T Consensus 1 s~P~~l~v~~v~~~~~si~l~W~~p--~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~ 78 (201)
T 2ha1_A 1 SGPVEVFITETPSQPNSHPIQWNAP--QPSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQ 78 (201)
T ss_dssp CCCCEEECCSCSCCSSCEEEEEECC--SSTTCCEEEEEEEETTCSSCCEEEEECTTCCEEEECSCCTTEEEEEEEEEECT
T ss_pred CCceeEEEEecCCCCCEEEEEEeCC--CCCCceEEEEEEEECCCCCceEEEecCCCccEEEecCCCCCCEEEEEEEEEec
Confidence 368899999988 99999999997 46789999999997654 333333 3345679999999999999999999999
Q ss_pred CCCCCCCCCeeEEecCC-----------CCCCCC----CCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCC
Q psy8771 698 RGEGATTPPIPVRTKQY-----------VPGAPP----QNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRS 762 (904)
Q Consensus 698 ~G~~~~s~~~~~~t~~~-----------~p~~~P----~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~ 762 (904)
.|.|.++ .+.+.|... .|..+| .+|.+...+.+++.|+|++| ++.+.+|.|+|+.....
T Consensus 79 ~G~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p-----~~~i~~Y~v~~~~~~~~ 152 (201)
T 2ha1_A 79 YGHQEVT-RFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA-----SDTVSGFRVEYELSEEG 152 (201)
T ss_dssp TSCEEEE-EEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCS-----CTTEEEEEEEEEETTTC
T ss_pred ccccCce-eEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCC-----CCCccEEEEEEEECCCC
Confidence 9988654 344544322 133233 56788888999999999988 35799999999976433
Q ss_pred CCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCC
Q psy8771 763 DSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSY 805 (904)
Q Consensus 763 ~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~ 805 (904)
.+ .....+. ..+.+.|.+|+|++.|.|+|+|.|..|.|....
T Consensus 153 ~~-~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~~~s 195 (201)
T 2ha1_A 153 DE-PQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQSLIL 195 (201)
T ss_dssp CC-CEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEEEEE
T ss_pred Cc-eeEEEcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCcccEe
Confidence 33 2334445 789999999999999999999999999886544
No 55
>2gys_A Cytokine receptor common beta chain; dimer of interlocking chains of fibronectin-III domains, FOU fibronectin-III domains PER chain; HET: NAG FUC BMA NDG; 2.70A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1gh7_A* 3cxe_A* 1egj_A* 1c8p_A
Probab=99.83 E-value=1.2e-18 Score=190.08 Aligned_cols=366 Identities=12% Similarity=0.169 Sum_probs=219.0
Q ss_pred CCcceEEEeecCCeEEEEEeCC--CccceEEEEEEEeCCCC---CCeEEe--------e--cceeceEEE--cCCCCCCe
Q psy8771 203 APLDVKISEVTATSVRLDWTYP--SETLLYYVIQYKPKAAN---TPYSEI--------S--GIITTYYTV--RNLSPYTE 265 (904)
Q Consensus 203 ~p~~l~~~~~~~~sv~l~W~~~--~~~~~~y~v~~~~~~~~---~~~~~~--------~--~~~~~~~~i--~~L~p~~~ 265 (904)
+|.+|++.......++|.|+++ ......|.+.|+..... ...... . ......+.+ ..+.....
T Consensus 5 ~~~~l~C~~~~~~~~~C~W~~~~~~~~~~~~~l~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~ 84 (419)
T 2gys_A 5 PLQTLRCYNDYTSHITCRWADTQDAQRLVNVTLIRRVNEDLLEPVSCDLSDDMPWSACPHPRCVPRRCVIPCQSFVVTDV 84 (419)
T ss_dssp HHHHCEEEECSSSEEEEEEEEEHHHHTTCCEEEEEEEETTEEEECCEEECSCCTTSCCCSSSEEEEEEEEECSCCCTTCE
T ss_pred cCCCceEEeCCCEEEEEEeeCCcCCCCcccEEEEeecCCcCCccceeccccCcccccCCCCCccccEeEeCCcceeeecc
Confidence 4678999888888999999987 22234577777642110 000000 0 001124444 56667789
Q ss_pred EEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEEeeceeEEEEEcCC-
Q psy8771 266 YEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHRRIGLVETYSLTGL- 344 (904)
Q Consensus 266 Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~~~~~~~~~~~~~L- 344 (904)
|.|+|.|.|..|. ...+.......+.||.++.+.... ..+.|+|++|...... ..+
T Consensus 85 ~~~~v~~~~~~~~-----~~~~~~~~~v~p~pP~~l~v~~~~-~~~~l~W~~p~~~~~~-----------------~~~~ 141 (419)
T 2gys_A 85 DYFSFQPDRPLGT-----RLTVTLTQHVQPPEPRDLQISTDQ-DHFLLTWSVALGSPQS-----------------HWLS 141 (419)
T ss_dssp EEEEEEESSCCCE-----EEEEEGGGSBCCCCCEEEEEEEET-TEEEEEEECCC----------------------CCSC
T ss_pred cEEEEeCCccccc-----cceEcHHHcccCCCCCceEEEecC-CeEEEEECCCcccccc-----------------chhc
Confidence 9999999776553 234444555567899999998876 6999999988642100 000
Q ss_pred CCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcEEEEEEeeecCCCCCC
Q psy8771 345 YPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGA 424 (904)
Q Consensus 345 ~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~g~~~ 424 (904)
.....|.++.+... +. +.. ..
T Consensus 142 ~~~l~Y~v~yr~~~--~~--w~~----------------------~~--------------------------------- 162 (419)
T 2gys_A 142 PGDLEFEVVYKRLQ--DS--WED----------------------AA--------------------------------- 162 (419)
T ss_dssp GGGEEEEEEEEETT--SC--STT----------------------CE---------------------------------
T ss_pred cCceEEEEEEccCC--CC--hhh----------------------ee---------------------------------
Confidence 12335666655432 10 000 00
Q ss_pred CCCCcceEeeccCCCCceeee--eccCCeEEEEEEEEeeCCC------CCCCCCCceeeecCCCCCCCCCCeEEEecCCc
Q psy8771 425 TTPPIPVRTKQYGKTPGFGEQ--ALYPNTLYYIWLAAQSPRG------EGATTPPIPVRTKQYEPGTAPRDVQVRPLSSS 496 (904)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~--~L~p~~~Y~~~v~a~~~~g------~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~ 496 (904)
. .......+.+. +|.|++.|.|+|+|.+..| .|.+|..+.+.+.... +.+|.++.+...+.+
T Consensus 163 --------~-~~~~~~~~~~~~~~L~p~~~Y~~rVra~~~~g~~~~G~wS~WS~~~~~~t~~~~-~~~p~~l~c~~~~~~ 232 (419)
T 2gys_A 163 --------I-LLSNTSQATLGPEHLMPSSTYVARVRTRLAPGSRLSGRPSKWSPEVCWDSQPGD-EAQPQNLECFFDGAA 232 (419)
T ss_dssp --------E-EEESSSEEEECTTTCCTTCEEEEEEEEEECTTSSCCBCCCCCCCCEEEECCCCC-TTSCEEEEEEECSSS
T ss_pred --------e-ecccceEEEechhhcCCCCeEEEEEEEecCCCCCCCcccCCCCCceeeeccccc-cCCCceEEEEECCce
Confidence 0 00011223334 8999999999999999642 3455677788887666 478899999988999
Q ss_pred eEEEEecCCCCCCCceeeEEEEEEeCCCCC--Ccc-eEE---Eeec--------CceEEEEcCCCCCCeEEEEEEEEeCC
Q psy8771 497 TMVIQWDEPETPNGQITGYKVYYTQDQSLP--MSA-WET---QVVD--------NNQLTTISDLTPHTIYTIRVQAFTSV 562 (904)
Q Consensus 497 ~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~--~~~-~~~---~~~~--------~~~~~~~~~L~p~t~Y~~~V~a~~~~ 562 (904)
.|.+.|+++....+ ..+|.|+|+...... ... +.. .... ....+.+.+|.+.+.|.|+|.|.++.
T Consensus 233 ~l~c~W~~~~~~~~-~~~y~l~y~~~~~~g~~~~~~~~~C~~~~~~~~~~~~~~~~c~~~~~~l~~~~~y~i~V~a~~~~ 311 (419)
T 2gys_A 233 VLSCSWEVRKEVAS-SVSFGLFYKPSPDAGSAVLLREEECSPVLREGLGSLHTRHHCQIPVPDPATHGQYIVSVQPRRAE 311 (419)
T ss_dssp EEEEEEEEEHHHHT-TCCEEEEEECC-----CCCCCCEECCCEEEECCTTTEEEEEEEEECSCTTTCCEEEEEEEECCCC
T ss_pred EEEeEEECCCCCCC-ceeEEEEEEecCccccccCcccccCCCcccccCCCcceeEEeEEECccCCccCEEEEEEEEccCC
Confidence 99999998522112 256999998763210 001 111 1111 11245678889999999999997543
Q ss_pred CCCCCCCcEEEecCCC-CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEec
Q psy8771 563 GPGPLSAPVLVKTQQG-VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAW 641 (904)
Q Consensus 563 g~~~~S~~~~~~t~~~-~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w 641 (904)
+ .+..... .|.+| .+.+.. ..+.+.|+|.+|...
T Consensus 312 ~--------~~~~~~~v~p~PP-~l~v~~-~~~~l~l~W~~P~~~----------------------------------- 346 (419)
T 2gys_A 312 K--------HIKSSVNIQMAPP-SLQVTK-DGDSYSLRWETMKMR----------------------------------- 346 (419)
T ss_dssp E--------EEEGGGSBCCCCC-EEEEC----CCCEEEEEC---------------------------------------
T ss_pred c--------cccceEEEEECCC-CeEEEE-eCCeEEEEECCCccc-----------------------------------
Confidence 3 1211111 24444 466555 467899999988420
Q ss_pred cCCCCCCCceeeEEEEEEeCCcccc-c-eEEecccceEEEeCCCCCcEEEEEEEEEcCCC--CC---CCCCCeeEEe
Q psy8771 642 SKPTHSGENIISYELYWNDTYAKAK-H-HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG--EG---ATTPPIPVRT 711 (904)
Q Consensus 642 ~~~~~~~~~~~~y~v~~~~~~~~~~-~-~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G--~~---~~s~~~~~~t 711 (904)
....+.+|.|+|+..+.... . .......+.+.|.+|+|++.|.|+|+|.+..| .| .+|.++.+.|
T Consensus 347 -----~~~~~l~Yev~y~~~~~~w~~~~~~~~~~~~~~~l~~L~p~t~Y~~qVRa~~~~g~~~G~wS~WS~~~~~~t 418 (419)
T 2gys_A 347 -----YEHIDHTFEIQYRKDTATWKDSKTETLQNAHSMALPALEPSTRYWARVRVRTSRTGYNGIWSEWSEARSWDT 418 (419)
T ss_dssp ---------CEEEEEEEECSSSCSTTSCEEEEESCSEEECCCCCSSCCCEEEEEEEECCTTCCBCCCCCCCCEECCC
T ss_pred -----ccccceEEEEEEEcCCCCcceeeccccccccEEEeccCCCCCeEEEEEEEEEcCCCCCCccCCCCCCeEeeC
Confidence 11246799999998764311 1 22223567899999999999999999999863 33 6666666554
No 56
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.82 E-value=2.8e-19 Score=195.29 Aligned_cols=211 Identities=20% Similarity=0.251 Sum_probs=153.1
Q ss_pred EEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCC-------
Q psy8771 455 IWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLP------- 526 (904)
Q Consensus 455 ~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~------- 526 (904)
+.+.+.|+.+...........+ .||.+|.++. ..++.+++.|+|++|.+.+| .+.+|.|+|+......
T Consensus 310 ~~C~C~ng~~ra~~d~~~~~ct---~pPsaP~nl~-~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~ 385 (536)
T 3fl7_A 310 TSCECEEGFFRAPQDPASMPCT---RPPSAPHYLT-AVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCE 385 (536)
T ss_dssp SSCEECTTCBCCTTCCTTSCCB---CCCCCBSCEE-EECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECC
T ss_pred cEEEEeccccccCCCccccccc---cCCCcccceE-EEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccC
Confidence 4466777777655433333222 4678999995 47889999999999987777 7999999999743210
Q ss_pred -CcceEEEee-cCceEEEEcCCCCCCeEEEEEEEEeCCCC---CCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEe
Q psy8771 527 -MSAWETQVV-DNNQLTTISDLTPHTIYTIRVQAFTSVGP---GPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWS 601 (904)
Q Consensus 527 -~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~---~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~ 601 (904)
...|..... ...+++.+.+|.|++.|.|+|+|.|..|. +..+..+.+.|.. .+|..+.+...+.+++.|+|.
T Consensus 386 ~~~~~~~~~~~~~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~---~~Ps~~~~~~~s~tSV~LsW~ 462 (536)
T 3fl7_A 386 ASVRYSEPPHGLTRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQ---TEPPKVRLEGRSTTSLSVSWS 462 (536)
T ss_dssp TTCEESSCSSSBCSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCS---CCCCEEEEEECCC-CCEEEEE
T ss_pred CCceEEEeecCCccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecc---cCCCCCceeeccCCeEEEEEE
Confidence 011111111 35678999999999999999999999887 3455566666644 445566667778899999999
Q ss_pred CCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeC
Q psy8771 602 KPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTG 681 (904)
Q Consensus 602 ~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~ 681 (904)
+|.. .++.+.+|.|+|+..+............++++|.+
T Consensus 463 pP~~-----------------------------------------~ng~I~~Y~V~y~~~~~~~~~~~v~~~~ts~~l~g 501 (536)
T 3fl7_A 463 IPPP-----------------------------------------QQSRVWKYEVTYRKKGDSNSYNVRRTEGFSVTLDD 501 (536)
T ss_dssp CCTT-----------------------------------------TTTTCSEEEEEEEEC--CCCCEEEEESSSEEECCS
T ss_pred CCcC-----------------------------------------CCCcccEEEEEEEECCCCceEEEEcCCCCEEEECC
Confidence 8865 56778888888887765533344456678999999
Q ss_pred CCCCcEEEEEEEEEcCCCCCCCCCCeeEEecC
Q psy8771 682 LYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 713 (904)
Q Consensus 682 L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~ 713 (904)
|+|++.|.|+|+|+|..|.|++|..+.++|..
T Consensus 502 L~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~ 533 (536)
T 3fl7_A 502 LAPDTTYLVQVQALTQEGQGAGSKVHEFQTLS 533 (536)
T ss_dssp CCSSCEEEEEEEEECC---CEECCCEEEECCC
T ss_pred CCCCCEEEEEEEEEcCCcccCCCCCEEEEeCC
Confidence 99999999999999999999999999999864
No 57
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=99.82 E-value=1.4e-18 Score=168.83 Aligned_cols=171 Identities=20% Similarity=0.342 Sum_probs=135.9
Q ss_pred CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCC
Q psy8771 484 APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVG 563 (904)
Q Consensus 484 ~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g 563 (904)
+|.+|.+...+.+++.|+|++|. ++.+.+|.|+|+..+..... .........+.+.+.+|.|++.|.|+|+|+|..|
T Consensus 25 ~P~~l~~~~~~~~sv~lsW~~p~--~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g 101 (203)
T 2gee_A 25 QPTDLSFVDITDSSIGLRWTPLN--SSTIIGYRITVVAAGEGIPI-FEDFVDSSVGYYTVTGLEPGIDYDISVYTVKNGG 101 (203)
T ss_dssp CCEEEEEECCTTTCEEEEEECCS--SSSCCEEEEEEEESSSSSCC-EEEEEETTCCEEEECSCCTTCEEEEEEEEESSSC
T ss_pred CCCccEEEecCCCEEEEEecCCC--CCCccEEEEEEEECCCCCCc-eeEEcCCCccEEEeCCCCCCCEEEEEEEEEeCCC
Confidence 78899999999999999999986 35789999999987643211 1223336778899999999999999999999877
Q ss_pred CCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccC
Q psy8771 564 PGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSK 643 (904)
Q Consensus 564 ~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~ 643 (904)
.+ ....+.+....| +|.++.+...+.+++.|+|.++.
T Consensus 102 ~s---~~~~~~t~~~~p-~P~~l~~~~~~~~sv~l~W~~p~--------------------------------------- 138 (203)
T 2gee_A 102 ES---TPTTLTQQTAVP-PPTDLRFTNIGPDTMRVTWAPPP--------------------------------------- 138 (203)
T ss_dssp BC---CCEEEEEECCCC-CCEEEEEEEEETTEEEEEEECCS---------------------------------------
T ss_pred cc---ccEeeeecCCCc-CCCceEEEEcCCCEEEEEEcCCC---------------------------------------
Confidence 64 445566655555 78999999889999999999983
Q ss_pred CCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCC
Q psy8771 644 PTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATT 704 (904)
Q Consensus 644 ~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s 704 (904)
++.+.+|.|.|+....... .........++.|.+|+|++.|.|+|+|++..|.|.++
T Consensus 139 ----~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~ 197 (203)
T 2gee_A 139 ----SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPL 197 (203)
T ss_dssp ----SCCCSEEEEEEEETTCGGGCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCE
T ss_pred ----CCCccEEEEEEEECCCCCccEEEEcCCCcCEEEECCCCCCCEEEEEEEEecCCCcCCCe
Confidence 3478899999988654432 22334566899999999999999999999999887654
No 58
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=99.81 E-value=1.6e-18 Score=166.14 Aligned_cols=177 Identities=18% Similarity=0.254 Sum_probs=134.3
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe-ecCceEEEEcCCCCCCeEEEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV-VDNNQLTTISDLTPHTIYTIRVQA 558 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a 558 (904)
.++.+|.+|++...+.+++.|+|++|. +.+.+|.|+|+..+ ..+.... .....++.+.+|.|++.|.|+|+|
T Consensus 5 t~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~~~~~----~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 77 (186)
T 1qr4_A 5 TDLDNPKDLEVSDPTETTLSLRWRRPV---AKFDRYRLTYVSPS----GKKNEMEIPVDSTSFILRGLDAGTEYTISLVA 77 (186)
T ss_dssp ---CCCEEEEEESCCSSEEEEEEECCS---SCCSEEEEEEECTT----CCEEEEEECTTCSEEEEESCCSSCEEEEEEEE
T ss_pred CCCcCCCceEEEecCCCEEEEEEeCCC---CCccEEEEEEEeCC----CCeeEEECCCCCCEEEECCCCCCCEEEEEEEE
Confidence 346889999999999999999999974 47889999999543 2222322 356788999999999999999999
Q ss_pred EeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEE
Q psy8771 559 FTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVT 638 (904)
Q Consensus 559 ~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~ 638 (904)
.|..|.+.. ....+.+ .|.+|.++.+...+.+++.|+|.++.
T Consensus 78 ~~~~~~s~~-~~~~~~t---~p~~P~~l~~~~~~~~sv~l~W~~p~---------------------------------- 119 (186)
T 1qr4_A 78 EKGRHKSKP-TTIKGST---VVGSPKGISFSDITENSATVSWTPPR---------------------------------- 119 (186)
T ss_dssp ESSSCBCCC-EEEEEEC---CCCCCSCEEEESCCSSCEEEEECCCS----------------------------------
T ss_pred EcCCccCCC-EEEEEEC---CCCCCCccEEEEeCCCEEEEEEECCC----------------------------------
Confidence 997655432 2233444 46778899999989999999999873
Q ss_pred EeccCCCCCCCceeeEEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEec
Q psy8771 639 LAWSKPTHSGENIISYELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTK 712 (904)
Q Consensus 639 l~w~~~~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~ 712 (904)
+.+.+|.|.|+..+.... .........++.|.+|.|++.|.|+|+|.+..|.|.+. ...+.|.
T Consensus 120 ----------~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~~~g~s~p~-~~~~~T~ 183 (186)
T 1qr4_A 120 ----------SRVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVKGFEESEPI-SGILKTA 183 (186)
T ss_dssp ----------SCCSEEEEEEEETTCCCCEEEEEETTCCEEEECSCCSSCEEEEEEEEEETTEECCCE-EEEEEC-
T ss_pred ----------CcccEEEEEEEeCCCCCceEEEcCCCcCEEEEcCCCCCCEEEEEEEEEcCCCcCcCE-EEEEEec
Confidence 358899999988765433 33344566899999999999999999999998877653 3455554
No 59
>3lb6_C IL-13, interleukin-13 receptor subunit alpha-2; cytokine, decoy, decoy receptor, glycoprotein; HET: MLY NAG; 3.05A {Homo sapiens} PDB: 3lb6_D*
Probab=99.81 E-value=9.2e-19 Score=186.82 Aligned_cols=225 Identities=12% Similarity=0.051 Sum_probs=125.5
Q ss_pred eeccCCeEEEEEEEEeeC----CCCCCCCCCceee---ecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEE
Q psy8771 445 QALYPNTLYYIWLAAQSP----RGEGATTPPIPVR---TKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKV 517 (904)
Q Consensus 445 ~~L~p~~~Y~~~v~a~~~----~g~~~~s~~~~~~---t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v 517 (904)
.++..+..|.|+|+|.+. .|.+.+|...... +.+..|+.+|.++.+...+.+.+.++|+++... +...+|.|
T Consensus 93 ~~~~l~~~y~~rV~a~~~~~~~~g~g~~S~~s~~~~~~~~eg~P~~~P~nl~C~~~~~~~l~csW~p~~~~-~~~~~Y~l 171 (380)
T 3lb6_C 93 DGFDLNKGIEAXIHTLLPWQCTNGSEVQSSWAETTYWISPQGIPETXVQDMDCVYYNWQYLLCSWKPGIGV-LLDTNYNL 171 (380)
T ss_dssp EECCTTSCEEEEEEEECCHHHHSSSCCBCCCEEEEECCCCCSCTTSSCEEEEEEEETTTEEEEEEECC-------CCEEE
T ss_pred EeecCCCceEEEEEeecCCcccCCccCccccchhhcccCCCCCCCCCCcEeEEEECCCcEEEEEEcCCCCC-CCCccEEE
Confidence 345558999999999965 5666655544333 344678889999999999999999999997643 55688999
Q ss_pred EEEeCCCCCCcceEEEee--cCceEEEEc--CCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCC-CCCCCCCCceEEecC
Q psy8771 518 YYTQDQSLPMSAWETQVV--DNNQLTTIS--DLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDIQ 592 (904)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~~ 592 (904)
+|+.........|..... +....+.+. ++.+.+.|.|+|+|.|..|.+. +....+.+.. ..|.+|.++.+...+
T Consensus 172 ~y~~~~~~~~~~C~~~~~~~g~~~~C~~~~~~~~~~~~Y~i~V~a~n~~G~~~-s~~~~~~~~~~v~p~pP~~l~v~~~~ 250 (380)
T 3lb6_C 172 FYWYEGLDHALQCVDYIKADGQNIGCRFPYLEASDYKDFYICVNGSSENKPIR-SSYFTFQLQNIVKPLPPVYLTFTRES 250 (380)
T ss_dssp EEECTTCSSCEECSEEEEC--CEEEEECCCCTTCSSSCEEEEEEEC-----CC-CEEEEECGGGSCCCCCCEEEEEC---
T ss_pred EEEECCCCccccCCCccccCCceEEEEeCCCcccceeEEEEEEEEEcCCeeec-cccEEEcHHHcccCCCCceEEEEEcC
Confidence 999765432233322221 233356666 4578899999999999888654 3445666655 357788899998877
Q ss_pred CCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEec
Q psy8771 593 ETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIG 672 (904)
Q Consensus 593 ~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~ 672 (904)
.+++.|+|.+|... ..+.+.+|+|+|+..+ ..+......
T Consensus 251 ~~~l~l~W~~P~~~----------------------------------------~~~~~l~Yev~y~~~~-~~w~~~~~~ 289 (380)
T 3lb6_C 251 SCEIKLKWSIPLGP----------------------------------------IPARCFDYEIEIREDD-TTLVTATVE 289 (380)
T ss_dssp ----CEEEECCSSS----------------------------------------CCSTTEEEEECC---------CCEES
T ss_pred CCeEEEEECCCCCC----------------------------------------CCcceEEEEEEEEeCC-CCceEeccc
Confidence 88999999998641 1235678888888753 233222222
Q ss_pred ccceEEEeC-CCCCcEEEEEEEEEcC-----CC-CCCCCCCeeEEecCC
Q psy8771 673 LVETYSLTG-LYPNTLYYIWLAAQSP-----RG-EGATTPPIPVRTKQY 714 (904)
Q Consensus 673 ~~~~~~l~~-L~p~t~Y~v~V~a~~~-----~G-~~~~s~~~~~~t~~~ 714 (904)
.++.|.+ |+|++.|.|+|+|... .| .|.+|.++.+.|...
T Consensus 290 --~~~~l~~~L~p~t~Y~~qVRa~~~~~~~~~g~WSeWS~~~~~~t~~~ 336 (380)
T 3lb6_C 290 --NETYTLKTTNETRQLCFVVRSKVNIYCSDDGIWSEWSDKQCWEGEDL 336 (380)
T ss_dssp --SSCC------------CCEEEEECTTTCSSCCCCCCCCC--------
T ss_pred --ceEEEeCccCCCcEEEEEEEEEEcccCCCCCCCCCCCCCEEEeCCCC
Confidence 3577888 9999999999999943 23 267788888887654
No 60
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.81 E-value=6.9e-15 Score=171.13 Aligned_cols=533 Identities=12% Similarity=0.045 Sum_probs=281.8
Q ss_pred cccccccccceEEEEeeeccCCe-eeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCc
Q psy8771 66 HPPTRAARSHARLAAQSVLRRGR-LAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQN 144 (904)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~ 144 (904)
...+...|.....|...+...+. .....+.|.. ...+|.|...+ . ..+..|+.+.|.|.+.| |.+.|+|+|+ +
T Consensus 75 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~--~~~~p~i~~~~-~-~~v~~g~~v~l~C~~~~-p~~~v~W~~~-g 148 (642)
T 1e07_A 75 IQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYP--ELPKPSISSNN-S-KPVEDKDAVAFTCEPET-QDATYLWWVN-N 148 (642)
T ss_pred ECCCCcccCcEEEEEEEcCCCeEEEEEEEEEecc--cCCCCcEEccC-c-eeEecCCcEEEEEECCC-CCeeEEEEEC-C
Confidence 33334444444445444433333 3334454432 13456666544 3 67889999999999999 9999999999 7
Q ss_pred cccCCCCceee--cceEEEEeee--cCCeEEEEEEEecCcce-EEEEEEEEEeecCCCCCCCCC----CcceEEEeecCC
Q psy8771 145 IELTPDDKLPV--GRNVLTLDRV--TESENYTCIAASVLGVI-ETSTIVKVQCKYAPLLTLPVA----PLDVKISEVTAT 215 (904)
Q Consensus 145 ~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n~~g~~-~~~~~l~v~~~~~~~~~~P~~----p~~l~~~~~~~~ 215 (904)
..+..+.++.+ .++.|.|.++ +|+|.|+|.|.|..|.. +..+.|.|. ..|.. |.+..+ ....
T Consensus 149 ~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~-------~~p~~~~~~~~~~~~--~~G~ 219 (642)
T 1e07_A 149 QSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVL-------YGPDAPTISPLNTSY--RSGE 219 (642)
T ss_pred eECCCCCceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEE-------eCCCCcEEecCCccc--ccCC
Confidence 77777666654 4678999999 69999999999988863 355677776 22222 222222 2345
Q ss_pred eEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCC--C
Q psy8771 216 SVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGET--E 293 (904)
Q Consensus 216 sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~--~ 293 (904)
.++|.+...+.+.. .+.|...+.. + .....+.|.++...+.+.|+|.|.|..|....+....+..... .
T Consensus 220 ~~~l~C~~~g~p~~--~i~W~~~g~~-----i--~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~ 290 (642)
T 1e07_A 220 NLNLSCHAASNPPA--QYSWFVNGTF-----Q--QSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPK 290 (642)
T ss_pred EEEEEEEcCCCCCc--EEEEEECCeE-----c--ccCCceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCC
Confidence 67777776533333 3445443211 1 1235699999999999999999999988654333333332211 0
Q ss_pred CCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEEE----------eeceeEEEEEcCCCCCcEEEEEEEEEcCCCCC
Q psy8771 294 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHHR----------RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG 363 (904)
Q Consensus 294 p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~~----------~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~ 363 (904)
|...+.+.... .....+.|.+.....+ ..+.++... .......+.|..+.......+++.+.|..|..
T Consensus 291 p~i~~~~~~~~-~~g~~v~l~C~~~~~p-~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 368 (642)
T 1e07_A 291 PFITSNNSNPV-EDEDAVALTCEPEIQN-TTYLWWVNNQSLPVSPRLQLSNDNRTLTLLSVTRNDVGPYECGIQNELSVD 368 (642)
T ss_pred CEEEcCCceeE-ecCCcEEEEEECCCCC-ccEEEEECCccCCCcCCEEEeCCCCEEEEeccCcccCeeEEEEEeCCCCCc
Confidence 10000111111 1123466776654433 234443211 01122467888888888888999999888753
Q ss_pred CCCCCcceeeccCCCCCCCCcccccccccceeeeEE--EEeccccCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCc
Q psy8771 364 ATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETY--SLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPG 441 (904)
Q Consensus 364 ~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 441 (904)
. +....+.....+..+ ...........+....+ .+.+..+. -..|... | ........
T Consensus 369 ~-s~~~~l~V~~~p~~~--~~~~~~~~~~~g~~~~l~C~~~g~p~~--~i~W~~~----g------------~~~~~~~~ 427 (642)
T 1e07_A 369 H-SDPVILNVLYGPDDP--TISPSYTYYRPGVNLSLSCHAASNPPA--QYSWLID----G------------NIQQHTQE 427 (642)
T ss_pred c-eeeEEEEEEcCCCCC--eecCCceEecCCCcEEEEEEcCccCCC--eEEEEEC----C------------EEcCCCce
Confidence 2 222222221111000 00000000111111111 11121111 1222221 0 01112345
Q ss_pred eeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeE----EEecCCceEEEEecCCCCCCCceeeEEE
Q psy8771 442 FGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQ----VRPLSSSTMVIQWDEPETPNGQITGYKV 517 (904)
Q Consensus 442 ~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~----v~~~~~~~~~l~W~~p~~~~~~i~~Y~v 517 (904)
+.|.++.+.....|+|.|.|..|....+....+.... ++.+|. +. ........+.|.+.... . .-.+
T Consensus 428 L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~--~~~~p~-i~~~~~~~v~~g~~v~l~C~~~~-~-----~~~i 498 (642)
T 1e07_A 428 LFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSA--ELPKPS-ISSNNSKPVEDKDAVAFTCEPEA-Q-----NTTY 498 (642)
T ss_pred EEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEec--cCCCce-EecCCceeecCCCeEEEEEECCC-C-----CcEE
Confidence 7888888888999999999999876655544444332 111221 11 11223457888887641 1 2345
Q ss_pred EEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCC-CCcEEEecCCCCC-CCCCCceEEecCCCe
Q psy8771 518 YYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPL-SAPVLVKTQQGVP-SQPRDLRAVDIQETA 595 (904)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~-S~~~~~~t~~~~p-~~p~~~~~~~~~~~~ 595 (904)
.|...+......-......+...+.|.++.......+++.|.|..|.... +..+.+...+..+ ..|.+..+.. ...
T Consensus 499 ~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~--g~~ 576 (642)
T 1e07_A 499 LWWVNGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLS--GAN 576 (642)
T ss_pred EEEECCEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEc--CCc
Confidence 55554422111111122223456788888887777888889998875322 2233333222111 1223332222 234
Q ss_pred EEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccc
Q psy8771 596 VTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVE 675 (904)
Q Consensus 596 ~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~ 675 (904)
+.|....... ... .|.|...+.. .....
T Consensus 577 ~~l~C~~~g~-----------------------------p~p-----------------~v~W~~~g~~------i~~~~ 604 (642)
T 1e07_A 577 LNLSCHSASN-----------------------------PSP-----------------QYSWRINGIP------QQHTQ 604 (642)
T ss_pred EEEEEEeccC-----------------------------CCC-----------------eEEEEECCEE------CccCc
Confidence 4454443211 111 2334333211 11224
Q ss_pred eEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCee
Q psy8771 676 TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIP 708 (904)
Q Consensus 676 ~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~ 708 (904)
.+.|.++.+...-.+++.|.|..|....+..+.
T Consensus 605 ~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s~~l~ 637 (642)
T 1e07_A 605 VLFIAKITPNNNGTYACFVSNLATGRNNSIVKS 637 (642)
T ss_pred eEEECcccccCCeEEEEEEEecccCcceeEEEE
Confidence 678888888888888999999998765444333
No 61
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=99.80 E-value=1.2e-18 Score=169.25 Aligned_cols=172 Identities=15% Similarity=0.303 Sum_probs=125.1
Q ss_pred CCCCeEEEecC--CceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEEEe
Q psy8771 484 APRDVQVRPLS--SSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQAFT 560 (904)
Q Consensus 484 ~p~~l~v~~~~--~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a~~ 560 (904)
+|.+|.+..++ .+++.|+|++| .++.+.+|.|+|+..... ..|..... ...+++.|.+|.|++.|.|+|+|+|
T Consensus 2 ~P~~l~v~~v~~~~~si~l~W~~p--~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n 77 (201)
T 2ha1_A 2 GPVEVFITETPSQPNSHPIQWNAP--QPSHISKYILRWRPKNSV--GRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQ 77 (201)
T ss_dssp CCCEEECCSCSCCSSCEEEEEECC--SSTTCCEEEEEEEETTCS--SCCEEEEECTTCCEEEECSCCTTEEEEEEEEEEC
T ss_pred CceeEEEEecCCCCCEEEEEEeCC--CCCCceEEEEEEEECCCC--CceEEEecCCCccEEEecCCCCCCEEEEEEEEEe
Confidence 57889998877 99999999998 356899999999976532 33544433 5578899999999999999999999
Q ss_pred CCCCCCCCCcEEEecCCCC-----------CCC-C----CCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCC
Q psy8771 561 SVGPGPLSAPVLVKTQQGV-----------PSQ-P----RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKP 624 (904)
Q Consensus 561 ~~g~~~~S~~~~~~t~~~~-----------p~~-p----~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p 624 (904)
..|.+..+ ...+.|.... |.+ | .++.+...+.+++.|+|.++
T Consensus 78 ~~G~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~~~~~~sv~l~W~~p--------------------- 135 (201)
T 2ha1_A 78 QYGHQEVT-RFDFTTTSTSTPVTSNTVTGETTPFSPLVATSESVTEITASSFVVSWVSA--------------------- 135 (201)
T ss_dssp TTSCEEEE-EEEEEECCCCCTTCSCCCCCSCCCCCCSCSCCSSCCCCCSCCEEEECCCS---------------------
T ss_pred cccccCce-eEEEecCCCCCCcccccccCCCCCCCCccCCceEEEecCCCeEEEEEeCC---------------------
Confidence 99987644 3444443211 111 1 34455555555666666554
Q ss_pred cceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCC
Q psy8771 625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGA 702 (904)
Q Consensus 625 ~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~ 702 (904)
++.+.+|.|.|+..+...+ .....+...++.|.+|+|++.|.|+|+|+|..|.|.
T Consensus 136 -----------------------~~~i~~Y~v~~~~~~~~~~~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~~~G~~~ 192 (201)
T 2ha1_A 136 -----------------------SDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQISEDGEQS 192 (201)
T ss_dssp -----------------------CTTEEEEEEEEEETTTCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCEE
T ss_pred -----------------------CCCccEEEEEEEECCCCCceeEEEcCCceeEEEeCCCCCCCEEEEEEEEEcCCCCcc
Confidence 2368999999987543332 223345567999999999999999999999999876
Q ss_pred CC
Q psy8771 703 TT 704 (904)
Q Consensus 703 ~s 704 (904)
+.
T Consensus 193 ~~ 194 (201)
T 2ha1_A 193 LI 194 (201)
T ss_dssp EE
T ss_pred cE
Confidence 54
No 62
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.80 E-value=1.2e-16 Score=182.53 Aligned_cols=235 Identities=18% Similarity=0.245 Sum_probs=152.3
Q ss_pred CCCCCcEEEeccCCceEEEEeCCCCC------------C--CceecccccccccceEEEEeeeccCCeeeeeeeeccCCC
Q psy8771 35 TAPRDVQVRPLSSSTMVIQWDEPETP------------N--GQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPV 100 (904)
Q Consensus 35 ~~p~~l~~~~~~~~s~~v~W~~~~~~------------~--g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~ 100 (904)
+....|.|...+.+.+.|+|.+.... + +.++.......|...+.|...+..+.......+.+.+
T Consensus 20 G~~v~L~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~v~~-- 97 (570)
T 3b43_A 20 GEPITLQCKVDGTPEIRIAWYKEHTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKAENSVGAVASSAVLVIKE-- 97 (570)
T ss_dssp TSCEEEEEEEESSSSCEEEEECSSSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEECC--
T ss_pred CCEEEEEEEEccCCCCEEEEEECCEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEEEeCCceEEEEEEEEECC--
Confidence 46777888888888999999876322 1 1123333344455555555554433334444454432
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEE
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~ 174 (904)
...||.|...+.+ +.+.+|+++.|.|.+.|.|.|.|+|+|+ |..+....++.. ....|.|.++ +|+|.|+|.
T Consensus 98 ~~~~p~~~~~~~~-~~~~~G~~v~l~C~~~g~p~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 175 (570)
T 3b43_A 98 RKLPPSFARKLKD-VHETLGFPVAFECRINGSEPLQVSWYKD-GELLKDDANLQTSFIHNVATLQILQTDQSHVGQYNCS 175 (570)
T ss_dssp CCCCCEESSCCCC-EEEETTSCEEEEEEEESSSSCEEEEEET-TEECCCCSSEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCCcccccCCC-eEecCCCeEEEEEEEccCCCCEEEEEEC-CEECcCCCCEEEEEECCEEEEEECcCChHHCEEEEEE
Confidence 2468899888888 8899999999999999999999999999 777766655432 4568999988 699999999
Q ss_pred EEecCcceEEEEEEEEEeecC-CCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEeec
Q psy8771 175 AASVLGVIETSTIVKVQCKYA-PLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEISG 249 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~~~~~-~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~~ 249 (904)
|.|..|....++.|.+..... |.+. ..|.++.+.. ...++|.+...+.+.. .+.|...+. ...+.....
T Consensus 176 a~n~~g~~~~~~~l~v~~~~~pp~~~--~~p~~~~v~~--G~~~~l~C~~~g~p~p--~i~W~k~g~~i~~~~~~~~~~~ 249 (570)
T 3b43_A 176 ASNPLGTASSSAKLTLSEHEVPPFFD--LKPVSVDLAL--GESGTFKCHVTGTAPI--KITWAKDNREIRPGGNYKMTLV 249 (570)
T ss_dssp EEETTEEEEEEEEEEEECCCCCCEEE--ECCCCBCCBS--BSCEEEEEEEESSSCC--EEEEEETTEECCTTSSEEEEEE
T ss_pred EEeCCcEEEEEEEEEEcCCCCCCccc--cCCceeEecC--CCeEEEEEEEEECCCC--EEEEEECCEECcCCCcEEEEEE
Confidence 999999988888888872110 0000 1122222222 2334444443322222 244443321 122222222
Q ss_pred ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
.....+.|.++...+.+.|+|.|.|..|..
T Consensus 250 ~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 279 (570)
T 3b43_A 250 ENTATLTVLKVTKGDAGQYTCYASNVAGKD 279 (570)
T ss_dssp TTEEEEEESSBCGGGCEEEEEEEEETTEEE
T ss_pred CCEEEEEEcccCcccCEEEEEEEECCCCcE
Confidence 334679999999999999999999988864
No 63
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=99.80 E-value=7.8e-19 Score=191.81 Aligned_cols=185 Identities=23% Similarity=0.276 Sum_probs=141.1
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCC-ceeeEEEEEEeCCcc-----------ccce-EEecccceEEEeCCCCCc
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGE-NIISYELYWNDTYAK-----------AKHH-RRIGLVETYSLTGLYPNT 686 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~-~~~~y~v~~~~~~~~-----------~~~~-~~~~~~~~~~l~~L~p~t 686 (904)
.|.+|.++. ..++.+++.|+|.++...++ .+.+|.|+|+..... .... .......+++|.+|.|++
T Consensus 333 pPsaP~nl~-~~vs~tSv~LsW~pP~~~gG~~i~~Y~V~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~ts~tI~gL~P~T 411 (536)
T 3fl7_A 333 PPSAPHYLT-AVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESGECGPCEASVRYSEPPHGLTRTSVTVSDLEPHM 411 (536)
T ss_dssp CCCCBSCEE-EECCTTSEEEEECCBSCCCSCSCCEEEEEEEEECC-CCCEEECCTTCEESSCSSSBCSSEEEEECCCTTC
T ss_pred CCCcccceE-EEecCCEEEEEEeCCcCCCCCceeEEEEEEEeccCCCCcccccCCCceEEEeecCCccceeEeCCCCCCC
Confidence 466888885 57899999999999887665 799999999974221 0111 111246789999999999
Q ss_pred EEEEEEEEEcCCCC---CCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC
Q psy8771 687 LYYIWLAAQSPRGE---GATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD 763 (904)
Q Consensus 687 ~Y~v~V~a~~~~G~---~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~ 763 (904)
.|.|+|+|+|..|. +..+..+.+.|.+.+ |..+.+...+.+++.|+|++| +..+|.+.+|.|+|+..+..
T Consensus 412 ~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~----Ps~~~~~~~s~tSV~LsW~pP--~~~ng~I~~Y~V~y~~~~~~- 484 (536)
T 3fl7_A 412 NYTFTVEARNGVSGLVTSRSFRTASVSINQTE----PPKVRLEGRSTTSLSVSWSIP--PPQQSRVWKYEVTYRKKGDS- 484 (536)
T ss_dssp EEEEEEEEECTTGGGCSCCCEEEEEEECCSCC----CCEEEEEECCC-CCEEEEECC--TTTTTTCSEEEEEEEEC--C-
T ss_pred EEEEEEEEEecCCCCCCCCccceeEEeecccC----CCCCceeeccCCeEEEEEECC--cCCCCcccEEEEEEEECCCC-
Confidence 99999999999887 334555667776554 455666788899999999998 56789999999999987654
Q ss_pred CccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771 764 SEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814 (904)
Q Consensus 764 ~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~ 814 (904)
. ....+. ..++++|.+|+|++.|.|+|+|.|..|.|++|.++.++|.++
T Consensus 485 ~--~~~~v~~~~ts~~l~gL~P~T~Y~frVrA~n~~G~Gp~S~~v~~~T~~~ 534 (536)
T 3fl7_A 485 N--SYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQEGQGAGSKVHEFQTLSP 534 (536)
T ss_dssp C--CCEEEEESSSEEECCSCCSSCEEEEEEEEECC---CEECCCEEEECCC-
T ss_pred c--eEEEEcCCCCEEEECCCCCCCEEEEEEEEEcCCcccCCCCCEEEEeCCC
Confidence 2 223334 889999999999999999999999999999999999999653
No 64
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.79 E-value=1.8e-16 Score=181.11 Aligned_cols=172 Identities=17% Similarity=0.290 Sum_probs=119.0
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a 175 (904)
..||.|+.++.+ +.+.+|+.+.|.|.+.|.|.|.|+|+|+ +..+....++.+ +.++|.|.++ +|+|.|+|.|
T Consensus 3 ~~pP~f~~~~~~-~~v~~G~~v~L~C~~~g~p~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 80 (570)
T 3b43_A 3 MEPPYFIEPLEH-VEAAIGEPITLQCKVDGTPEIRIAWYKE-HTKLRSAPAYKMQFKNNVASLVINKVDHSDVGEYTCKA 80 (570)
T ss_dssp CCCCEEEECCCC-EEECTTSCEEEEEEEESSSSCEEEEECS-SSBCCCCSSEEEECCTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCcceEECCc-eEEcCCCEEEEEEEEccCCCCEEEEEEC-CEEccCCCCEEEEEECCEEEEEEccCChhhCEEEEEEE
Confidence 579999998888 9999999999999999999999999999 777766555543 3468999998 6999999999
Q ss_pred EecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEeecce
Q psy8771 176 ASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEISGII 251 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~~~~ 251 (904)
.|..|.....+.|.|.....+. .....+.++.+ .....+.|.+...+.+.. .|.|..++. ...........
T Consensus 81 ~N~~g~~~~~~~l~v~~~~~~p-~~~~~~~~~~~--~~G~~v~l~C~~~g~p~~--~v~W~k~g~~l~~~~~~~~~~~~~ 155 (570)
T 3b43_A 81 ENSVGAVASSAVLVIKERKLPP-SFARKLKDVHE--TLGFPVAFECRINGSEPL--QVSWYKDGELLKDDANLQTSFIHN 155 (570)
T ss_dssp EETTEEEEEEEEEEECCCCCCC-EESSCCCCEEE--ETTSCEEEEEEEESSSSC--EEEEEETTEECCCCSSEEEEEETT
T ss_pred EeCCceEEEEEEEEECCCCCCC-cccccCCCeEe--cCCCeEEEEEEEccCCCC--EEEEEECCEECcCCCCEEEEEECC
Confidence 9999998888888776211000 00012223332 233455666654433222 344444321 11222222223
Q ss_pred eceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
...+.|.++...+.+.|+|.|.|..|...
T Consensus 156 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 184 (570)
T 3b43_A 156 VATLQILQTDQSHVGQYNCSASNPLGTAS 184 (570)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred EEEEEECcCChHHCEEEEEEEEeCCcEEE
Confidence 46799999999999999999999988643
No 65
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.78 E-value=1.4e-14 Score=168.55 Aligned_cols=485 Identities=13% Similarity=0.088 Sum_probs=263.7
Q ss_pred CCCCcEEEeccCCceEEEEeCCCC------------CCCceecccccccccceEEEEeeeccCCe-eeeeeeeccCCCCC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPET------------PNGQITHPPTRAARSHARLAAQSVLRRGR-LAHAVRQVADPVRR 102 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~------------~~g~i~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~ 102 (904)
....|.|...+ +.+.|.|.+... +++.++.......+.....|...+..... ...+.+.+. .
T Consensus 127 ~~v~l~C~~~~-p~~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~----~ 201 (642)
T 1e07_A 127 DAVAFTCEPET-QDATYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVL----Y 201 (642)
T ss_pred CcEEEEEECCC-CCeeEEEEECCeECCCCCceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEE----e
Confidence 34456666655 789999976421 12233333334444444445444433322 223444443 1
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCc
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLG 180 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g 180 (904)
.|+.+...|.+ ..+.+|+.+.|.|.+.|.|.+.|+|+|+ |..+. ....|.|.++ +|+|.|+|.|.|..|
T Consensus 202 ~p~~~~~~~~~-~~~~~G~~~~l~C~~~g~p~~~i~W~~~-g~~i~-------~~~~L~i~~~~~~d~G~Y~C~a~n~~g 272 (642)
T 1e07_A 202 GPDAPTISPLN-TSYRSGENLNLSCHAASNPPAQYSWFVN-GTFQQ-------STQELFIPNITVNNSGSYTCQAHNSDT 272 (642)
T ss_pred CCCCcEEecCC-cccccCCEEEEEEEcCCCCCcEEEEEEC-CeEcc-------cCCceEEecccccCCeEEEEEEEeCCC
Confidence 22223334555 7789999999999999999999999999 65553 3457999998 699999999999998
Q ss_pred ceEEEE--EEEEEeecCCCCCCCCCCc----ceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe--EEeeccee
Q psy8771 181 VIETST--IVKVQCKYAPLLTLPVAPL----DVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY--SEISGIIT 252 (904)
Q Consensus 181 ~~~~~~--~l~v~~~~~~~~~~P~~p~----~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~ 252 (904)
....+. .|.|. ..|.+|. +..+. .....+.|.+...+.+ ..+.|...+..... ........
T Consensus 273 ~~~~s~~~~v~v~-------~~~~~p~i~~~~~~~~-~~g~~v~l~C~~~~~p---~~v~W~~~g~~l~~~~~~~~~~~~ 341 (642)
T 1e07_A 273 GLNRTTVTTITVY-------AEPPKPFITSNNSNPV-EDEDAVALTCEPEIQN---TTYLWWVNNQSLPVSPRLQLSNDN 341 (642)
T ss_pred ceEEeeeEEEEEE-------ccCCCCEEEcCCceeE-ecCCcEEEEEECCCCC---ccEEEEECCccCCCcCCEEEeCCC
Confidence 765544 44444 2222221 11121 2234688888876544 24555544322110 11111223
Q ss_pred ceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCC--eEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEEEE
Q psy8771 253 TYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP--AVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAKHH 330 (904)
Q Consensus 253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~--~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~~~ 330 (904)
..+.|.++...+.+.|+|.|.|..|... +.. +.+...+..+...|....+ .....+.|.+.....+...+.++..
T Consensus 342 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~-s~~~~l~V~~~p~~~~~~~~~~~~--~~g~~~~l~C~~~g~p~~~i~W~~~ 418 (642)
T 1e07_A 342 RTLTLLSVTRNDVGPYECGIQNELSVDH-SDPVILNVLYGPDDPTISPSYTYY--RPGVNLSLSCHAASNPPAQYSWLID 418 (642)
T ss_pred CEEEEeccCcccCeeEEEEEeCCCCCcc-eeeEEEEEEcCCCCCeecCCceEe--cCCCcEEEEEEcCccCCCeEEEEEC
Confidence 6799999999999999999999988643 222 2332222211112222222 2345677777765555555665542
Q ss_pred Ee-eceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcE
Q psy8771 331 RR-IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTL 409 (904)
Q Consensus 331 ~~-~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (904)
.. ......+.|..+.......+++.|.|..|....+....+........+..... .......+....+......+. .
T Consensus 419 g~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~~-~~~~v~~g~~v~l~C~~~~~~-~ 496 (642)
T 1e07_A 419 GNIQQHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISSN-NSKPVEDKDAVAFTCEPEAQN-T 496 (642)
T ss_pred CEEcCCCceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEecC-CceeecCCCeEEEEEECCCCC-c
Confidence 22 22344688889999999999999999988766554444433221111111100 000111222222222221121 1
Q ss_pred EEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEEEEEEEEeeCCCCCCC-CCCceeeecCCCCCCCCCCe
Q psy8771 410 YYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLYYIWLAAQSPRGEGAT-TPPIPVRTKQYEPGTAPRDV 488 (904)
Q Consensus 410 y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~-s~~~~~~t~~~~p~~~p~~l 488 (904)
-..|.... ....... +.........+.|.++.......|+|.|.|..|.... +..+.+...+..+...|.+.
T Consensus 497 ~i~W~~~g----~~l~~~~---~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~ 569 (642)
T 1e07_A 497 TYLWWVNG----QSLPVSP---RLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDS 569 (642)
T ss_pred EEEEEECC----EeCCCCC---cEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCce
Confidence 22232211 1000000 0011112346788899888888999999999886432 12233332221222233444
Q ss_pred EEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCC
Q psy8771 489 QVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLS 568 (904)
Q Consensus 489 ~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S 568 (904)
.+. ....+.|.......+ . -.|.|...+.. ......+.|..+.+...-.+++.|.|..|....+
T Consensus 570 ~v~--~g~~~~l~C~~~g~p---~--p~v~W~~~g~~---------i~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~s 633 (642)
T 1e07_A 570 SYL--SGANLNLSCHSASNP---S--PQYSWRINGIP---------QQHTQVLFIAKITPNNNGTYACFVSNLATGRNNS 633 (642)
T ss_pred eEE--cCCcEEEEEEeccCC---C--CeEEEEECCEE---------CccCceEEECcccccCCeEEEEEEEecccCccee
Confidence 332 234566666642111 1 14666665411 1123457888888888888999999999875555
Q ss_pred CcEEE
Q psy8771 569 APVLV 573 (904)
Q Consensus 569 ~~~~~ 573 (904)
..+.+
T Consensus 634 ~~l~V 638 (642)
T 1e07_A 634 IVKSI 638 (642)
T ss_pred EEEEE
Confidence 44443
No 66
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.77 E-value=2.8e-17 Score=176.75 Aligned_cols=430 Identities=14% Similarity=0.157 Sum_probs=242.9
Q ss_pred eEEEeecCCeEEEEEeCCC--ccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCC
Q psy8771 207 VKISEVTATSVRLDWTYPS--ETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSP 284 (904)
Q Consensus 207 l~~~~~~~~sv~l~W~~~~--~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~ 284 (904)
|.+..-+-..+.|+|+++. ..-..|.+.+... . ........+.+.|..|.+++ +.+.|-.....|...+.-
T Consensus 2 ~~c~~~~~~~~~c~w~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~- 74 (483)
T 3e0g_A 2 LKCVTNNLQVWQCSWKAPSGTGRGTDYEVCIEQR--S---RSCYQLEKTSIKIPALSHGD-YEITINSLHDFGSSTSKF- 74 (483)
T ss_dssp CCEEBSSTTEEEEBCCCCSSSCSSCCEEEEECSS--S---CEEEEESSSBCCEECCSSSC-CCEEEECSSCC----CCC-
T ss_pred ceeEeccceEEEEeccCCCCCCCCceEEEEEeCC--c---ccchhhhccceEeecCCccc-eEEEEcccCCCCCCceeE-
Confidence 3344444567899999982 2345688886541 1 11222244678999999998 677776666655443332
Q ss_pred eEEecCCC-CCCCCCCceEecccCC-CeeEEEecCCCCCC---ceeeEEE-EEe---------------e-cee--E--E
Q psy8771 285 AVITTGET-EPGTAPRDVQVRPLSS-STMVIQWDEPETPN---GQITAKH-HRR---------------I-GLV--E--T 338 (904)
Q Consensus 285 ~~~~t~~~-~p~~~p~~l~~~~~~~-~~v~l~W~~p~~~~---~~~~~~~-~~~---------------~-~~~--~--~ 338 (904)
.+..... ..|.+|..+.+..... .++.|.|....... ..+.+.. +.+ . ... . +
T Consensus 75 -~~~~~~~~~~p~~p~~l~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~i~i~r~~~~~~v~~~~~~~~~~~~~~~~~w~ 153 (483)
T 3e0g_A 75 -TLNEQNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVIWEIKVLRKESMELVKLVTHQTTLNGKDTLHHWS 153 (483)
T ss_dssp -EECCSCCEECCCCCCBCCCEEETTTTEEEEEEEECGGGCCSCCEEEEEEEEESSSSCEEEEEEEEEECGGGCCEEEEEE
T ss_pred -EEEcccceeccCCCceEEEEecCCCcEEEEEEeCCCCCCCcccceEEEEEEEEcCCccEEEEEEEEEEecCCCceEEEE
Confidence 2211111 2346778888877655 88999998653321 1111110 000 0 001 0 1
Q ss_pred EEEcCCCCCcEEEEEEEEE-cC---CCCCCCCCCcceeeccCCCCCCCCcccccccccceeeeEEEEeccccCcEEEEEE
Q psy8771 339 YSLTGLYPNTLYYIWLAAQ-SP---RGEGATTPPIPVRTKQYGKTPGFGEQAAKHHRRIGLVETYSLTGLYPNTLYYIWL 414 (904)
Q Consensus 339 ~~~~~L~~~~~Y~v~v~a~-~~---~g~~~~s~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ 414 (904)
.+-.--.+++.|.+++++. ++ .|.+.+|......+....................|. ...+.+
T Consensus 154 w~s~~plec~~h~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~~~~~~ifP~~~vv~~GS-------------~vt~~C 220 (483)
T 3e0g_A 154 WASDMPLECAIHFVEIRCYIDNLHFSGLEEWSDWSPVKQISWIPDSQTKVFPQDKVILVGS-------------DITFCC 220 (483)
T ss_dssp EECSSCTTSSCEEEEEEEEEECTTCCSEECCCCCCCCEEECCCCCSSCCEESCSEEEETTC-------------CEEEEE
T ss_pred ecCCCCCCCCccEEEEEEEecccccCCCCCCcCCCChhhccccCCCCcEEeccCCEEeCCC-------------CEEEEE
Confidence 2223345799999999998 33 343334444433333111111110000111111222 112222
Q ss_pred eeecCC-CCCCCCCCcceEeeccCCCCceeeeeccC----CeEEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeE
Q psy8771 415 AAQSPR-GEGATTPPIPVRTKQYGKTPGFGEQALYP----NTLYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQ 489 (904)
Q Consensus 415 ~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~L~p----~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~ 489 (904)
...... +......... .....+....+++.+|.. |+.|.+.. . + .... ..+.. ..||.+|.++.
T Consensus 221 i~~~~~~~~~l~~~~~~-~~~l~~~~~~i~v~nl~~~~~sg~n~~C~~----~-~-~~~g--~~l~v--g~PP~~P~nls 289 (483)
T 3e0g_A 221 VSQEKVLSALIGHTNCP-LIHLDGENVAIKIRNISVSASSGTNVVFTT----E-D-NIFG--TVIFA--GYPPDTPQQLN 289 (483)
T ss_dssp CCSSCEEEEESSSCCBC-CEECSSSCEEEEECSCCCCCSSCEEEEEEE----S-S-CEEE--EEEEE--ECCCCCCEEEE
T ss_pred EeCccccceecCcccce-eEEecCCEEEEEEeCCCCccCccceEEEec----C-C-cccc--eEEEC--cCCCCCCCccE
Confidence 111000 0000000000 011233455566666644 45565542 1 1 1111 11222 25778999999
Q ss_pred EEecCCceEEEEecCCCCCC--C-ceeeEEEEEEeCCCCCCcceEEEe--ecCceEEEEcCCCCCCeEEEEEEEEeCCCC
Q psy8771 490 VRPLSSSTMVIQWDEPETPN--G-QITGYKVYYTQDQSLPMSAWETQV--VDNNQLTTISDLTPHTIYTIRVQAFTSVGP 564 (904)
Q Consensus 490 v~~~~~~~~~l~W~~p~~~~--~-~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~ 564 (904)
....+.+++.++|+++.+.+ | ....|.|.|+..+. ...+.... .+....+.+.+|.+.+.|.|+|.|.|..|.
T Consensus 290 C~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~g~--~~~C~~~~~~~~~~~~C~~~~l~~~t~Y~f~V~A~N~lG~ 367 (483)
T 3e0g_A 290 CETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGK--YVRLKRAEAPTNESYQLLFQMLPNQEIYNFTLNAHNPLGR 367 (483)
T ss_dssp EEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTTCC--EEEECCCSSCSCSCEEEEEECCTTCCCEEEEEEEECSSCE
T ss_pred EEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEECCC--CccccCCcccCCCEEEEEEccCCCCcEEEEEEEEEeCCCC
Confidence 98888889999999976543 3 37899999975431 11111100 123457899999999999999999999987
Q ss_pred CCCCCcEEEec-CCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccC
Q psy8771 565 GPLSAPVLVKT-QQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSK 643 (904)
Q Consensus 565 ~~~S~~~~~~t-~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~ 643 (904)
+. |. ..+.. ....|.+|.++.+...+.+.+.|+|.+|..
T Consensus 368 ~~-S~-~~~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P~~-------------------------------------- 407 (483)
T 3e0g_A 368 SQ-ST-ILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPGN-------------------------------------- 407 (483)
T ss_dssp EE-EE-EEECGGGGBCCCCCEEEEECCSSSSSCCEEEECCSC--------------------------------------
T ss_pred cc-cc-eEEEeccccCCCCCeeeEEEEecCCeEEEEECCCCC--------------------------------------
Confidence 65 33 44442 234678899999988888899999999854
Q ss_pred CCCCCCceeeEEEEEEeCCccc-cceEEec----ccceEEEeCCCCCcEEEEEEEEEcCCCC---CCCCCCeeEEecCC
Q psy8771 644 PTHSGENIISYELYWNDTYAKA-KHHRRIG----LVETYSLTGLYPNTLYYIWLAAQSPRGE---GATTPPIPVRTKQY 714 (904)
Q Consensus 644 ~~~~~~~~~~y~v~~~~~~~~~-~~~~~~~----~~~~~~l~~L~p~t~Y~v~V~a~~~~G~---~~~s~~~~~~t~~~ 714 (904)
.++....|+|+|+..+... +...... ....+.|.+|+|++.|.|+|+|. ..|. |++|.+..+.|.++
T Consensus 408 ---~~~~~L~YeVrYr~~~~~~~~~~vsv~~~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T~E~ 482 (483)
T 3e0g_A 408 ---FAKINFLCEIEIKKSNSVQEQRNVTIQGVENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLTTEA 482 (483)
T ss_dssp ---CTTSBCCCEEEEECSSSCCCEEECCCBCCSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCCCCC
T ss_pred ---CCCceEEEEEEEEECCCCCceEEEEEeccCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeECCCC
Confidence 3445788999998876543 2211111 22367899999999999999999 6676 67788888888654
No 67
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.77 E-value=2.1e-17 Score=161.59 Aligned_cols=192 Identities=18% Similarity=0.231 Sum_probs=140.9
Q ss_pred CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEE
Q psy8771 579 VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYW 658 (904)
Q Consensus 579 ~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~ 658 (904)
+|.+|.++.+...+..++.++|.++.+ .+ ....|.|.|
T Consensus 3 pP~~P~nl~c~~~~~~~~~c~W~p~~~-----------------------------------------~~-~~~~Y~l~y 40 (210)
T 3n06_B 3 PPGKPEIFKCRSPNKETFTCWWRPGTD-----------------------------------------GG-LPTNYSLTY 40 (210)
T ss_dssp CCCCCEEEEEEBSSSSCEEEEEECCSS-----------------------------------------SC-CCSEEEEEE
T ss_pred CCCCCeEeEEEeCCCCeEEEEECCCCC-----------------------------------------CC-CCceEEEEE
Confidence 567788888877777888888887653 22 246888888
Q ss_pred EeCCccccceEE---ecccceEEE--eCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecC----
Q psy8771 659 NDTYAKAKHHRR---IGLVETYSL--TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLS---- 729 (904)
Q Consensus 659 ~~~~~~~~~~~~---~~~~~~~~l--~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~---- 729 (904)
+......+.... ......+.+ .+|.+.+.|.|+|.|.|..|.+. +..+.+.+....+..||.++.+....
T Consensus 41 ~~~~~~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~~V~A~N~~G~~~-s~~~~~~~~~~v~p~pP~~l~~~~~~~~~~ 119 (210)
T 3n06_B 41 HREGETLMHECPDYITGGPNSCHFGKQYTSMWRTYIMMVNATNQMGSSF-SDELYVDVTYIVQPDPPLELAVEVKQPEDR 119 (210)
T ss_dssp EETTCCCCEECSCSSTTCTTEEEECGGGCCSSSCEEEEEEEEETTEEEE-CCCEEECGGGCBCCCCCEEEEEEEECCSSS
T ss_pred EECCCCccccCCCCCCCCCeEEEeCCCCcccceeEEEEEEEEcCCCCee-CCcEEEchhheEecCCCceEEEEEecCcCC
Confidence 876543332111 112334544 67999999999999999998874 45666766666666689999887653
Q ss_pred CCEEEEEecCCCCCCC-Cc-cEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEeeCCCC-CCCCCc
Q psy8771 730 STSIRISWEPPPVERS-NG-HIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIGD-GPSSYP 806 (904)
Q Consensus 730 ~~~v~l~W~~~~~~~~-~g-~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~-g~~s~~ 806 (904)
.+++.|+|++|..... +| .+.+|+|+|+..++..+ ........+.+.|.+|.+++.|.|+|+|.+..|. |++|.+
T Consensus 120 ~~~l~l~W~~p~~~~~~~g~~~~~Y~v~y~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~ 197 (210)
T 3n06_B 120 KPYLWIKWSPPTLIDLKTGWFTLLYEIRLKPEKAAEW--EIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPA 197 (210)
T ss_dssp CCEEEEEEECCTTCCCTTSSCCEEEEEEEECTTCSSC--EEEEEETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCC
T ss_pred CceEEEEcCCCCCccccCCeEEEEEEEEEecCCCCCC--EEEeccCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCc
Confidence 5899999999864321 24 46899999998765443 2222226789999999999999999999999886 999999
Q ss_pred EEeecCCCC
Q psy8771 807 ITIRTHEDD 815 (904)
Q Consensus 807 ~~~~t~~~~ 815 (904)
+.++|+.+.
T Consensus 198 ~~~~Tp~~~ 206 (210)
T 3n06_B 198 TFIQIPSDF 206 (210)
T ss_dssp EEEECCTTC
T ss_pred eeEECcCCC
Confidence 999996653
No 68
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=99.76 E-value=4.2e-17 Score=159.41 Aligned_cols=192 Identities=17% Similarity=0.205 Sum_probs=144.9
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee---cCceEEEE--cCCCCCCeEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV---DNNQLTTI--SDLTPHTIYTI 554 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~L~p~t~Y~~ 554 (904)
.||.+|.++++...+.++|.++|+++.+.+. ...|.|+|+.... ..|..... .....+.+ .+|.+.+.|.|
T Consensus 2 ~pP~~P~nl~c~~~~~~~~~c~W~p~~~~~~-~~~Y~l~y~~~~~---~~~~~c~~~~~~~~~~c~~~~~~l~~~~~Y~~ 77 (210)
T 3n06_B 2 LPPGKPEIFKCRSPNKETFTCWWRPGTDGGL-PTNYSLTYHREGE---TLMHECPDYITGGPNSCHFGKQYTSMWRTYIM 77 (210)
T ss_dssp CCCCCCEEEEEEBSSSSCEEEEEECCSSSCC-CSEEEEEEEETTC---CCCEECSCSSTTCTTEEEECGGGCCSSSCEEE
T ss_pred CCCCCCeEeEEEeCCCCeEEEEECCCCCCCC-CceEEEEEEECCC---CccccCCCCCCCCCeEEEeCCCCcccceeEEE
Confidence 4678999999999999999999999775443 4799999997653 23443321 22344554 57999999999
Q ss_pred EEEEEeCCCCCCCCCcEEEecCCC-CCCCCCCceEEecC----CCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEE
Q psy8771 555 RVQAFTSVGPGPLSAPVLVKTQQG-VPSQPRDLRAVDIQ----ETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRA 629 (904)
Q Consensus 555 ~V~a~~~~g~~~~S~~~~~~t~~~-~p~~p~~~~~~~~~----~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~ 629 (904)
+|+|.|..|.+ .|....+.+... .|.+|.++.+.... .+++.|+|.++...+
T Consensus 78 ~V~A~N~~G~~-~s~~~~~~~~~~v~p~pP~~l~~~~~~~~~~~~~l~l~W~~p~~~~---------------------- 134 (210)
T 3n06_B 78 MVNATNQMGSS-FSDELYVDVTYIVQPDPPLELAVEVKQPEDRKPYLWIKWSPPTLID---------------------- 134 (210)
T ss_dssp EEEEEETTEEE-ECCCEEECGGGCBCCCCCEEEEEEEECCSSSCCEEEEEEECCTTCC----------------------
T ss_pred EEEEEcCCCCe-eCCcEEEchhheEecCCCceEEEEEecCcCCCceEEEEcCCCCCcc----------------------
Confidence 99999999977 355566655443 46788888887653 578999999885410
Q ss_pred EeeccceEEEeccCCCCCCC-ceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCC-CCCCCCe
Q psy8771 630 VDIQETAVTLAWSKPTHSGE-NIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE-GATTPPI 707 (904)
Q Consensus 630 ~~~~~~~~~l~w~~~~~~~~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~-~~~s~~~ 707 (904)
..++ ...+|.|+|+..+...+..........+.|.+|.|++.|.|+|+|.+..|. |.+|..+
T Consensus 135 ----------------~~~g~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~Vra~~~~g~wS~wS~~~ 198 (210)
T 3n06_B 135 ----------------LKTGWFTLLYEIRLKPEKAAEWEIHFAGQQTEFKILSLHPGQKYLVQVRCKPDHGYWSAWSPAT 198 (210)
T ss_dssp ----------------CTTSSCCEEEEEEEECTTCSSCEEEEEETCSEEEECCCCTTCEEEEEEEEEESSSCCCCCCCCE
T ss_pred ----------------ccCCeEEEEEEEEEecCCCCCCEEEeccCceEEEEeccCCCCEEEEEEEEecCCCcccCCCCce
Confidence 0112 368999999987765554444455679999999999999999999999887 8999999
Q ss_pred eEEecCC
Q psy8771 708 PVRTKQY 714 (904)
Q Consensus 708 ~~~t~~~ 714 (904)
.+.|...
T Consensus 199 ~~~Tp~~ 205 (210)
T 3n06_B 199 FIQIPSD 205 (210)
T ss_dssp EEECCTT
T ss_pred eEECcCC
Confidence 9999655
No 69
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=99.76 E-value=3.3e-17 Score=171.47 Aligned_cols=230 Identities=16% Similarity=0.161 Sum_probs=154.0
Q ss_pred eEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecC-CCeEEEEEeCCCCCCCCceEEEEEe
Q psy8771 539 QLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQ-ETAVTLAWSKPTHSGENIISYELYW 617 (904)
Q Consensus 539 ~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~-~~~~~l~W~~~~~~~~~~~~y~v~~ 617 (904)
..+.|.++.......+.+.+.+ |.+..+....+.. ..+|.+|.++.+...+ .+++.++|.++.+
T Consensus 61 ~~L~i~~~~~~d~g~y~c~~~~--~~~~~~~~~~l~v-~~~P~~P~~l~c~~~~~~~~~~~~W~~~~~------------ 125 (313)
T 2d9q_B 61 SIITLPHLNHTQAFLSCSLNWG--NSLQILDQVELRA-GYPPAIPHNLSCLMNLTTSSLICQWEPGPE------------ 125 (313)
T ss_dssp EEEEESCCCSSEEEEEEEEESS--SSEEEEEEEEEEE-CCCCCCCEEEEEEEETTTTEEEEEEECCSC------------
T ss_pred EEEEEeccCCCccceEEeeecC--CCceeEEEEEEcc-CCCCCCCccceeeECCCCccEEEEecCCCC------------
Confidence 5688999988766666666643 2222121222222 3467789999888774 6899999998864
Q ss_pred ccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc------cceEE-ecccceEEE--eCCCCCcEE
Q psy8771 618 NDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA------KHHRR-IGLVETYSL--TGLYPNTLY 688 (904)
Q Consensus 618 ~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~------~~~~~-~~~~~~~~l--~~L~p~t~Y 688 (904)
.+ ....|.|+|+...... +.... ......+.+ .+|.+++.|
T Consensus 126 -----------------------------~~-~~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y 175 (313)
T 2d9q_B 126 -----------------------------TH-LPTSFTLKSFKSRGNCQTQGDSILDCVPKDGQSHCSIPRKHLLLYQNM 175 (313)
T ss_dssp -----------------------------CS-SCCEEEEEEEECCTTSCSCCCCEEEECCCTTCSEEEEEGGGCCSSSCE
T ss_pred -----------------------------CC-CceeEEEEEEecCCCcccCCcccccCCCCCCCcEEEECccccccceeE
Confidence 22 2345778777653211 11111 122345555 459999999
Q ss_pred EEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEec------CCCEEEEEecCCCCCCCCccEEEEEEEEE-EccC
Q psy8771 689 YIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL------SSTSIRISWEPPPVERSNGHIVYYKLQFV-ETGR 761 (904)
Q Consensus 689 ~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~------~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~-~~~~ 761 (904)
.|+|.|.|..|.+. +..+.+.+....++.||.++.+... ..+++.|+|++|. ..++.+.+|+|+|+ ..+.
T Consensus 176 ~f~V~A~N~~G~~~-s~~~~~~~~~~~~p~pP~~~~~~~~~~~~~~~~~~l~l~W~~p~--~~~~~~l~Y~v~y~~~~~~ 252 (313)
T 2d9q_B 176 GIWVQAENALGTSM-SPQLCLDPMDVVKLEPPMLRTMDPSPEAAPPQAGCLQLSWEPWQ--PGLHINQKCELRHKPQRGE 252 (313)
T ss_dssp EEEEEEEETTEEEE-CCCEEECGGGGEECCCCEEEECCC-------CCSCEEEEEECCG--GGTTSCEEEEEEEEESSSC
T ss_pred EEEEEEECCCCCcc-CccEEEehhheeccCcCceeEEEEecccccCCCCeEEEEECCCC--CCCceeEEEEEEEccCCCC
Confidence 99999999999863 4456676666555568888888765 4689999999984 23344589999999 4444
Q ss_pred CCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCC---CCCcEEeecCCCCCC
Q psy8771 762 SDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGP---SSYPITIRTHEDDPS 817 (904)
Q Consensus 762 ~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~---~s~~~~~~t~~~~P~ 817 (904)
..|... .... ..+.+.|.+|.|++.|.|+|+|.|..|.|. +|.++.++|.+++|+
T Consensus 253 ~~w~~~-~~~~~~~~~~~l~~L~p~t~Y~~rVra~~~~g~G~wS~wS~~~~~~T~~~~P~ 311 (313)
T 2d9q_B 253 ASWALV-GPLPLEALQYELCGLLPATAYTLQIRCIRWPLPGHWSDWSPSLELRTTERAAA 311 (313)
T ss_dssp CCCEEE-EEECSCEEEEEECSCCSCCCEEEEEEEEECSSCCCCCCCCCCEEECCCC----
T ss_pred CCcEEc-ccccCcceEEEEeCCCCCCeEEEEEEeeECCCCCccCCCCCccceeCCccCCC
Confidence 334211 1223 667899999999999999999999977764 778899999988874
No 70
>3e0g_A Leukemia inhibitory factor receptor; IG domain, cytokine binding homology region (CHR), cell MEMB disease mutation, glycoprotein, membrane; HET: NAG MAN FUC; 3.10A {Homo sapiens}
Probab=99.75 E-value=6.6e-17 Score=173.91 Aligned_cols=366 Identities=15% Similarity=0.175 Sum_probs=219.5
Q ss_pred CCceeeeeccCCeEEEEEEEEeeCCCCCCCCCCceeeecCC-CCCCCCCCeEEEecCC-ceEEEEecCCCC--CCCceee
Q psy8771 439 TPGFGEQALYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY-EPGTAPRDVQVRPLSS-STMVIQWDEPET--PNGQITG 514 (904)
Q Consensus 439 ~~~~~~~~L~p~~~Y~~~v~a~~~~g~~~~s~~~~~~t~~~-~p~~~p~~l~v~~~~~-~~~~l~W~~p~~--~~~~i~~ 514 (904)
.+.+.|..|.++. +++.|....+.|...... .+.-... .-|.+|..|.+..... ..+.|+|..... +......
T Consensus 44 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~p~~l~~~~~~~~~~l~~~w~~~~~~~~~~~~~~ 120 (483)
T 3e0g_A 44 KTSIKIPALSHGD-YEITINSLHDFGSSTSKF--TLNEQNVSLIPDTPEILQLSADFSTSTLYLKWNDRGSVFPHRSNVI 120 (483)
T ss_dssp SSBCCEECCSSSC-CCEEEECSSCC----CCC--EECCSCCEECCCCCCBCCCEEETTTTEEEEEEEECGGGCCSCCEEE
T ss_pred ccceEeecCCccc-eEEEEcccCCCCCCceeE--EEEcccceeccCCCceEEEEecCCCcEEEEEEeCCCCCCCcccceE
Confidence 4567899999998 777776655554433222 2211111 2345778888777665 799999987421 1123567
Q ss_pred EEEEEEeCCCCCCcceEEEee----cCceEE----EEcCCCCCCeEEEEEEEE-eC---CCC---CCCCCcEEEecCCC-
Q psy8771 515 YKVYYTQDQSLPMSAWETQVV----DNNQLT----TISDLTPHTIYTIRVQAF-TS---VGP---GPLSAPVLVKTQQG- 578 (904)
Q Consensus 515 Y~v~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~L~p~t~Y~~~V~a~-~~---~g~---~~~S~~~~~~t~~~- 578 (904)
|.|+........ -.|..... .....+ +-+--.+++.|.++||+. +. .|. +.||....+.....
T Consensus 121 ~~i~i~r~~~~~-~v~~~~~~~~~~~~~~~~~w~w~s~~plec~~h~v~iR~~~~~~~~~~~~~ws~Ws~~~~~~~~~~~ 199 (483)
T 3e0g_A 121 WEIKVLRKESME-LVKLVTHQTTLNGKDTLHHWSWASDMPLECAIHFVEIRCYIDNLHFSGLEEWSDWSPVKQISWIPDS 199 (483)
T ss_dssp EEEEEESSSSCE-EEEEEEEEECGGGCCEEEEEEEECSSCTTSSCEEEEEEEEEECTTCCSEECCCCCCCCEEECCCCCS
T ss_pred EEEEEEEcCCcc-EEEEEEEEEEecCCCceEEEEecCCCCCCCCccEEEEEEEecccccCCCCCCcCCCChhhccccCCC
Confidence 888888765321 11221111 111111 122234789999999998 22 444 34444434422111
Q ss_pred CCC-CCCC--------ceEEec--------------------CCCeEEEEEeCCCCC-----------CCCceEEEEEec
Q psy8771 579 VPS-QPRD--------LRAVDI--------------------QETAVTLAWSKPTHS-----------GENIISYELYWN 618 (904)
Q Consensus 579 ~p~-~p~~--------~~~~~~--------------------~~~~~~l~W~~~~~~-----------~~~~~~y~v~~~ 618 (904)
.+. -|.+ +.+.-+ +.....+.-...... .+.+.+-.|...
T Consensus 200 ~~~ifP~~~vv~~GS~vt~~Ci~~~~~~~~~l~~~~~~~~~l~~~~~~i~v~nl~~~~~sg~n~~C~~~~~~~g~~l~vg 279 (483)
T 3e0g_A 200 QTKVFPQDKVILVGSDITFCCVSQEKVLSALIGHTNCPLIHLDGENVAIKIRNISVSASSGTNVVFTTEDNIFGTVIFAG 279 (483)
T ss_dssp SCCEESCSEEEETTCCEEEEECCSSCEEEEESSSCCBCCEECSSSCEEEEECSCCCCCSSCEEEEEEESSCEEEEEEEEE
T ss_pred CcEEeccCCEEeCCCCEEEEEEeCccccceecCcccceeEEecCCEEEEEEeCCCCccCccceEEEecCCcccceEEECc
Confidence 000 1111 111111 111111111100000 011222233344
Q ss_pred cCCCCCcceEEEeeccceEEEeccCCCCCC--C-ceeeEEEEEEeCCccccceEE---ecccceEEEeCCCCCcEEEEEE
Q psy8771 619 DTYAKPRDLRAVDIQETAVTLAWSKPTHSG--E-NIISYELYWNDTYAKAKHHRR---IGLVETYSLTGLYPNTLYYIWL 692 (904)
Q Consensus 619 ~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~--~-~~~~y~v~~~~~~~~~~~~~~---~~~~~~~~l~~L~p~t~Y~v~V 692 (904)
.+|.+|+++.......+.++++|.++...+ | ....|.|.|+..+........ .+....+.+.+|.+.+.|.|+|
T Consensus 280 ~PP~~P~nlsC~s~~~~sltCsW~pg~dt~l~G~~~t~YtL~y~~~g~~~~C~~~~~~~~~~~~C~~~~l~~~t~Y~f~V 359 (483)
T 3e0g_A 280 YPPDTPQQLNCETHDLKEIICSWNPGRVTALVGPRATSYTLVESFSGKYVRLKRAEAPTNESYQLLFQMLPNQEIYNFTL 359 (483)
T ss_dssp CCCCCCEEEEEEBSSTTEEEEEEECCSCCSCCGGGCCEEEEEETTTCCEEEECCCSSCSCSCEEEEEECCTTCCCEEEEE
T ss_pred CCCCCCCccEEEecCCCEEEEEECCCCcCCcCCCCCeeEEEEEEECCCCccccCCcccCCCEEEEEEccCCCCcEEEEEE
Confidence 467889999988888889999999976542 2 378999999764322111000 1234578999999999999999
Q ss_pred EEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec
Q psy8771 693 AAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK 772 (904)
Q Consensus 693 ~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~ 772 (904)
.|.|..|.+. +. ..+.....+++.||.++.+...+.+++.|+|++|. ..++.+..|+|+|+..+.... .....+.
T Consensus 360 ~A~N~lG~~~-S~-~~~~~~~~VkP~PP~nl~v~~~~stsl~LsW~~P~--~~~~~~L~YeVrYr~~~~~~~-~~~vsv~ 434 (483)
T 3e0g_A 360 NAHNPLGRSQ-ST-ILVNITEKVYPHTPTSFKVKDINSTAVKLSWHLPG--NFAKINFLCEIEIKKSNSVQE-QRNVTIQ 434 (483)
T ss_dssp EEECSSCEEE-EE-EEECGGGGBCCCCCEEEEECCSSSSSCCEEEECCS--CCTTSBCCCEEEEECSSSCCC-EEECCCB
T ss_pred EEEeCCCCcc-cc-eEEEeccccCCCCCeeeEEEEecCCeEEEEECCCC--CCCCceEEEEEEEEECCCCCc-eEEEEEe
Confidence 9999998765 32 44544444555689999998888899999999994 456678899999998764321 1111221
Q ss_pred ----CcceEEecCCCCCceEEEEEEEeeCCCC---CCCCCcEEeecCCC
Q psy8771 773 ----NQTSFVLDELKKWTEYRIWVLAGTSIGD---GPSSYPITIRTHED 814 (904)
Q Consensus 773 ----~~~~~~i~~L~p~t~Y~~~V~a~~~~g~---g~~s~~~~~~t~~~ 814 (904)
....+.+.+|.|++.|.|+|+|. ..|. |++|.++.++|.++
T Consensus 435 ~~~~~~~s~~l~~L~PgT~Y~vrVRA~-~~g~g~WSeWS~~~~f~T~E~ 482 (483)
T 3e0g_A 435 GVENSSYLVALDKLNPYTLYTFRIRCS-TETFWKWSKWSNKKQHLTTEA 482 (483)
T ss_dssp CCSSSBCCCCCCSCCSSSSCEEEEECC-CSSCCCCCCCCCCCCCCCCCC
T ss_pred ccCCceeEEEEeccCCCcEEEEEEEEe-eCCCCCcCCCCCceeeECCCC
Confidence 23367899999999999999999 6665 78888888888654
No 71
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.74 E-value=6.1e-15 Score=176.81 Aligned_cols=682 Identities=12% Similarity=0.110 Sum_probs=336.5
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC--ceeecceEEEEeee--cC------CeEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD--KLPVGRNVLTLDRV--TE------SENY 171 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~--~~~~~~~~l~i~~l--~d------~g~Y 171 (904)
..+|.|...|.+.+.+..|+++.|.|.+.|.|.|+|.|+|++|..+.... +....+++|.|.++ +| +|.|
T Consensus 36 ~~~P~~~~~p~~~~~~~~g~~~~l~C~a~g~p~p~~~W~k~~g~~~~~~~~~~~~~~~g~l~i~~~~~~~~~~~~d~G~Y 115 (816)
T 3dmk_A 36 QKGPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVY 115 (816)
T ss_dssp CEEEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEE
T ss_pred cCCCcEEeCCCCeEEEECCCCeEEEeeecCCCCCEEEEEeCCCCCccCCCceEEEeeCCcEEEcCCChHHccccccceEE
Confidence 56789999988867789999999999999999999999993377765432 34457889999887 44 8999
Q ss_pred EEEEEecCcce-EEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccc-eEEEEEEEeCCCC--------
Q psy8771 172 TCIAASVLGVI-ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETL-LYYVIQYKPKAAN-------- 241 (904)
Q Consensus 172 ~c~a~n~~g~~-~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~-~~y~v~~~~~~~~-------- 241 (904)
+|.|.|..|.. +..+.|.+. ..+. ....+....+ ....++.|.|..+.... ....+.|...+..
T Consensus 116 ~C~a~n~~G~~~S~~~~v~~~--~~~~--~~~~~~~~~v--~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~ 189 (816)
T 3dmk_A 116 ACLARNQFGSIISRDVHVRAV--VAQY--YEADVNKEHV--IRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEY 189 (816)
T ss_dssp EEEEEETTEEEEEEEEEEEEE--CCCC--CCCBCCCEEE--ETTSCEEECCBCCHHHHTTEEEEEEEETTSCEECBSSCB
T ss_pred EEEEecCcceEEccceEEEEE--Eccc--cEEEEecceE--ecCceEEEEECCCccccccEEEEEEEecCceEeccccCC
Confidence 99999999975 455555544 1111 1223333333 45677888888762211 1234555543221
Q ss_pred -CCeEEeecceeceEEEcCCCCCCe-EEEEEEEEcCCCCCC-CCC---CeEEecCCCCCCCCCCc------eEecccCCC
Q psy8771 242 -TPYSEISGIITTYYTVRNLSPYTE-YEFYIIAVNNLGRGP-PSS---PAVITTGETEPGTAPRD------VQVRPLSSS 309 (904)
Q Consensus 242 -~~~~~~~~~~~~~~~i~~L~p~~~-Y~~~v~a~n~~g~s~-~s~---~~~~~t~~~~p~~~p~~------l~~~~~~~~ 309 (904)
..+.. .....+.|.++++.+. +.|+|.|.|..+... .+. .+.+.. +. ...+|.. -........
T Consensus 190 ~~r~~~---~~~g~L~I~~v~~~D~~g~Y~C~~~~~~~~~~~~s~~~~~l~v~~-~~-~~~~P~i~~~~~~~~~~v~~g~ 264 (816)
T 3dmk_A 190 DGKYLV---LPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITE-PI-SSAVPKVVSLAKFDMKTYSGSS 264 (816)
T ss_dssp TTTEEE---CTTSCEEESSCCGGGSSCEEEEEEEETTTCCEEECSBCEEEEEEC-CC-SCCCCBCCGGGGEEEEEECTTS
T ss_pred CceEEE---ecCceEEEecCChhhccceeEEEEeeeeeeeeeecccccceEEeC-CC-CCCCCccccccCccceEEeCCC
Confidence 11111 1235799999999998 999999997654321 111 122221 11 1112221 112223445
Q ss_pred eeEEEecCCCCCCceeeEEEEEe--------------eceeEEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcceeecc
Q psy8771 310 TMVIQWDEPETPNGQITAKHHRR--------------IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 375 (904)
Q Consensus 310 ~v~l~W~~p~~~~~~~~~~~~~~--------------~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~~t~~ 375 (904)
.+.|.+.....+...+.++.... .....++.|..+.......+++.+.|..|.......+.+...
T Consensus 265 ~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~- 343 (816)
T 3dmk_A 265 TMALLCPAQGYPVPVFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAP- 343 (816)
T ss_dssp CEEECCCCBCSSCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEE-
T ss_pred eEEEEEEeeecCCCeEEEEeCCCCCccCcceecCCceEeccceEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCC-
Confidence 66777765544444555543110 011236788888888888888888887764321111111000
Q ss_pred CCCCCCCCcccccccccceeee--EEEEeccccCcEEEEEEeeecCCCCCCCCCCcceEeeccCCCCceeeeeccCCeEE
Q psy8771 376 YGKTPGFGEQAAKHHRRIGLVE--TYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYGKTPGFGEQALYPNTLY 453 (904)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~L~p~~~Y 453 (904)
+.............+... ...+.+.... -..|... |. ........+.|.++......
T Consensus 344 ----~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~--~v~W~k~----g~-----------~~~~~~~~L~i~~v~~~d~G 402 (816)
T 3dmk_A 344 ----LSAKIDPPTQTVDFGRPAVFTCQYTGNPIK--TVSWMKD----GK-----------AIGHSESVLRIESVKKEDKG 402 (816)
T ss_dssp ----EEEEEESSEEECCTTSCEEEEEEEEEECCC--EEEEEET----TE-----------ECSCCSSEEEESSCCGGGCE
T ss_pred ----CceeeCCCceEecCCCCEEEEEEEeccCCC--EEEEEEC----CE-----------ECCCCCCEEEEcCCCHHHCE
Confidence 000000000000011111 1111111111 1122211 00 00112345788899998899
Q ss_pred EEEEEEeeCCCCCCCCCCceeeecCCCCCC---CCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCC--c
Q psy8771 454 YIWLAAQSPRGEGATTPPIPVRTKQYEPGT---APRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPM--S 528 (904)
Q Consensus 454 ~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~---~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~--~ 528 (904)
.|+|.|.|..|....+..+.+.... .|+. .+.+..+ .....+.|.......+ .-.+.|...+.... .
T Consensus 403 ~Y~C~a~n~~g~~~~~~~l~v~~~~-~~p~i~~~~~~~~v--~~G~~v~L~C~~~g~p-----~p~v~W~~~g~~l~~~~ 474 (816)
T 3dmk_A 403 MYQCFVRNDRESAEASAELKLGGRF-DPPVIRQAFQEETM--EPGPSVFLKCVAGGNP-----TPEISWELDGKKIANND 474 (816)
T ss_dssp EEEEEEECSSCEEEECCEEECCCSS-CCCEEEEECCCEEE--CSSSCEEEEEEEECSS-----CCEEEEEETTEECCSCT
T ss_pred EEEEEEECCCCcEEEEEEEEEcccc-CCCceEecCcceEE--cCCCCEEEEEEEecCC-----CCEEEEEECCEECCCCC
Confidence 9999999987754433333222111 1110 0111111 1233455555331110 01345554331100 1
Q ss_pred ceEEE--ee-c--CceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCC
Q psy8771 529 AWETQ--VV-D--NNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKP 603 (904)
Q Consensus 529 ~~~~~--~~-~--~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~ 603 (904)
..... .. . ....+.|..+.......+++.|.|..|....+..+.+...+.. ..+....+ .....+.|.....
T Consensus 475 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~-~~~~~~~v--~~G~~v~l~C~~~ 551 (816)
T 3dmk_A 475 RYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYI-RQMEKKAI--VAGETLIVTCPVA 551 (816)
T ss_dssp TEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEE-CCCCCEEE--ETTCCEEEECCEE
T ss_pred CcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCee-EccCCeEE--ecCCeEEEEEEec
Confidence 11110 01 1 1234778888888888888899998775433333333221111 11222222 1233455544322
Q ss_pred CCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeC
Q psy8771 604 THSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTG 681 (904)
Q Consensus 604 ~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~ 681 (904)
. .... .+.|...+.... ..........+.|.+
T Consensus 552 g-----------------------------~p~~-----------------~i~W~k~~~~l~~~~~~~~~~~~~l~i~~ 585 (816)
T 3dmk_A 552 G-----------------------------YPID-----------------SIVWERDNRALPINRKQKVFPNGTLIIEN 585 (816)
T ss_dssp C-----------------------------SSEE-----------------EEEEEETTEESCCSTTEEECTTSEEEESS
T ss_pred C-----------------------------CCCC-----------------EEEEEECCeEcccCCceEEecCCeEEEEe
Confidence 1 0111 333333322111 111112334678888
Q ss_pred CC-CCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC--CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEE
Q psy8771 682 LY-PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG--APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVE 758 (904)
Q Consensus 682 L~-p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~--~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~ 758 (904)
+. ......++..|.|..|... +..+.+.....++. ..+.... ......+.|.+..... ..+ ..|.|..
T Consensus 586 v~~~~d~G~Y~C~a~n~~g~~~-~~~~~v~v~~~p~~~~~~~~~~~--~~~G~~v~L~C~~~~~---~~~---~~i~W~~ 656 (816)
T 3dmk_A 586 VERNSDQATYTCVAKNQEGYSA-RGSLEVQVMVLPRIIPFAFEEGP--AQVGQYLTLHCSVPGG---DLP---LNIDWTL 656 (816)
T ss_dssp CCHHHHCEEEEEEEEESSSCEE-EEEEEEEEECCCCCBCCCCCSSC--EESSCEEEEEEBCCCS---SSC---CEEEEEE
T ss_pred cCccccCEEEEEEEEECCCcee-eeeEEEEEecCCccccccccccc--cCCCCeEEEEEEEeCC---CCC---CEEEEEE
Confidence 86 4566677778889877532 11222222221111 1112222 2246788888876421 111 2345555
Q ss_pred ccCCCC---ccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC---CCCCCc---cC------
Q psy8771 759 TGRSDS---EASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED---DPSEVC---PT------ 822 (904)
Q Consensus 759 ~~~~~~---~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~---~P~~v~---~~------ 822 (904)
.+.... ........ ....+.|.++.......++..|.|..|....+..+.+...+. .|.... ..
T Consensus 657 ~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C 736 (816)
T 3dmk_A 657 DGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVEC 736 (816)
T ss_dssp TTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEEECCCCEEEETTCCEEEEC
T ss_pred CCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCceeeecccceecCCCcEEEEE
Confidence 442211 11122222 456788999999999999999999888654333232221110 111100 00
Q ss_pred --------CcceeeCCCC-CceeeeeeeecCCceEEecCCCeeEEEEcCCCCCcEEEEEEEEEecCCCCCCCCce
Q psy8771 823 --------QNDFRKNKKT-NGSNFKGGYLNDPMRFDVSDGGALELNVTGLQPDTIYTIQVAALTRKGDGDRSKPE 888 (904)
Q Consensus 823 --------~~~W~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~n~~G~g~~s~~~ 888 (904)
.++|...... .+... ....... .. . ...++.|.++.....=.++..|.|..|....+...
T Consensus 737 ~~~g~P~p~i~W~k~~~~~~~~~~--~~~~~~~-~~-~--~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~v~~ 805 (816)
T 3dmk_A 737 KADGFPKPQVTWKKAVGDTPGEYK--DLKKSDN-IR-V--EEGTLHVDNIQKTNEGYYLCEAINGIGSGLSAVIM 805 (816)
T ss_dssp EEEEESCCEEECCEECSSSTTCCB--CCCCBTT-EE-E--ETTEEEECSCCGGGCEEEEEEEECSSSSCEEEEEE
T ss_pred EEecCCCCeEEEEecCCCCCcccc--ccccCCC-EE-e--cCCEEEECcCChhhCeEEEEEEEeCCCCCcEEEEE
Confidence 1155421100 00000 0000000 01 1 12368899999988888999999999976433333
No 72
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.73 E-value=4.7e-17 Score=159.91 Aligned_cols=190 Identities=16% Similarity=0.180 Sum_probs=132.7
Q ss_pred CCCCCCCceEEec-CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEE
Q psy8771 579 VPSQPRDLRAVDI-QETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELY 657 (904)
Q Consensus 579 ~p~~p~~~~~~~~-~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~ 657 (904)
+|.+|.++.+... ..+++.++|.++.+ .+ ....|.|.
T Consensus 4 pP~~P~~l~c~~~~~~~~~~~~W~p~~~-----------------------------------------~~-~~~~Y~l~ 41 (215)
T 1cd9_B 4 PPASPSNLSCLMHLTTNSLVCQWEPGPE-----------------------------------------TH-LPTSFILK 41 (215)
T ss_dssp CCCCCEEEEEEEETTTTEEEEEEECCSC-----------------------------------------CS-SCCEEEEE
T ss_pred CCCCCeeeeeecCCCcccEEEEecCCCC-----------------------------------------CC-CceeEEEE
Confidence 4567777777665 46777788877643 22 23568888
Q ss_pred EEeCCcccc------ceEEe---cccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEec
Q psy8771 658 WNDTYAKAK------HHRRI---GLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL 728 (904)
Q Consensus 658 ~~~~~~~~~------~~~~~---~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~ 728 (904)
|+....... ..... .....+.+.+|.+++.|.|+|.|.|..|.+. +..+.+.+....+..||.++.+...
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y~~~V~A~N~~G~~~-s~~~~~~~~~~v~p~pP~~~~~~~~ 120 (215)
T 1cd9_B 42 SFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYMAIWVQAENMLGSSE-SPKLCLDPMDVVKLEPPMLQALDIG 120 (215)
T ss_dssp EEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCEEEEEEEEETTEEEE-CCCEEECGGGGBCCCCCEEEECCC-
T ss_pred EEecCCcccccccccccCCCCCCCcEEEECCcccccceEEEEEEEEECCCCCcc-CccEEEchHHceEeCCCcEEEEEEe
Confidence 876543211 11110 1234677789999999999999999998753 4567777666566668999988776
Q ss_pred ------CCCEEEEEecCCCCCCCCccEEEEEEEEE-EccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCC
Q psy8771 729 ------SSTSIRISWEPPPVERSNGHIVYYKLQFV-ETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGD 800 (904)
Q Consensus 729 ------~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~-~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~ 800 (904)
..+++.|+|++|. ..+..+.+|+|+|+ ..+...+.. ..... ..+.+.|.+|+|++.|.|+|+|.+..|.
T Consensus 121 ~~~~~~~~~~~~l~W~~p~--~~~~~~l~Y~v~y~~~~~~~~w~~-~~~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~ 197 (215)
T 1cd9_B 121 PDVVSHQPGCLWLSWKPWK--PSEYMEQECELRYQPQLKGANWTL-VFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLP 197 (215)
T ss_dssp ------CCSCEEEEEECCG--GGTTSCEEEEEEEEESSTTCCCEE-EEEEESCEEEEEECCCCSCSCEEEEEEEEESSSC
T ss_pred ccccCCCCCeEEEEEeCCC--CCCeEEEEEEEEEccCCCCCCcEE-EecccCcceEEEEcCCCCCCEEEEEEEeeECCCC
Confidence 6789999999985 23334489999999 554443321 11223 6688999999999999999999998665
Q ss_pred C---CCCCcEEeecCCC
Q psy8771 801 G---PSSYPITIRTHED 814 (904)
Q Consensus 801 g---~~s~~~~~~t~~~ 814 (904)
| ++|.++.++|.++
T Consensus 198 G~wS~wS~~~~~~T~e~ 214 (215)
T 1cd9_B 198 GFWSPWSPGLQLRPTMK 214 (215)
T ss_dssp CCCCCCCCCEEECCCC-
T ss_pred CCCcCCCCccceecCCC
Confidence 4 6788899998764
No 73
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=99.72 E-value=1.3e-16 Score=156.83 Aligned_cols=192 Identities=16% Similarity=0.110 Sum_probs=138.1
Q ss_pred CCCCCCCCeEEEec-CCceEEEEecCCCCCCCceeeEEEEEEeCCCCC---CcceEEEee---cCceEEEEcCCCCCCeE
Q psy8771 480 EPGTAPRDVQVRPL-SSSTMVIQWDEPETPNGQITGYKVYYTQDQSLP---MSAWETQVV---DNNQLTTISDLTPHTIY 552 (904)
Q Consensus 480 ~p~~~p~~l~v~~~-~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~L~p~t~Y 552 (904)
.||.+|.++.+... ..+++.++|+++.+.+. ...|.|+|+...... ...+..... .....+.+.+|.+++.|
T Consensus 3 ~pP~~P~~l~c~~~~~~~~~~~~W~p~~~~~~-~~~Y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~Y 81 (215)
T 1cd9_B 3 YPPASPSNLSCLMHLTTNSLVCQWEPGPETHL-PTSFILKSFRSRADCQYQGDTIPDCVAKKRQNNCSIPRKNLLLYQYM 81 (215)
T ss_dssp CCCCCCEEEEEEEETTTTEEEEEEECCSCCSS-CCEEEEEEEECCGGGCSCCCEEEEEECCTTCCEEEEEGGGCCTTSCE
T ss_pred CCCCCCeeeeeecCCCcccEEEEecCCCCCCC-ceeEEEEEEecCCcccccccccccCCCCCCCcEEEECCcccccceEE
Confidence 56789999998876 67899999999876443 457999998754210 111222211 23345677899999999
Q ss_pred EEEEEEEeCCCCCCCCCcEEEecCC-CCCCCCCCceEEec------CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCc
Q psy8771 553 TIRVQAFTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDI------QETAVTLAWSKPTHSGENIISYELYWNDTYAKPR 625 (904)
Q Consensus 553 ~~~V~a~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~------~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~ 625 (904)
.|+|.|.|..|.+ .|....+.+.. ..|.+|.++.+... ..+++.|+|.+|..
T Consensus 82 ~~~V~A~N~~G~~-~s~~~~~~~~~~v~p~pP~~~~~~~~~~~~~~~~~~~~l~W~~p~~-------------------- 140 (215)
T 1cd9_B 82 AIWVQAENMLGSS-ESPKLCLDPMDVVKLEPPMLQALDIGPDVVSHQPGCLWLSWKPWKP-------------------- 140 (215)
T ss_dssp EEEEEEEETTEEE-ECCCEEECGGGGBCCCCCEEEECCC-------CCSCEEEEEECCGG--------------------
T ss_pred EEEEEEECCCCCc-cCccEEEchHHceEeCCCcEEEEEEeccccCCCCCeEEEEEeCCCC--------------------
Confidence 9999999999875 35556666544 34678888888776 57889999998853
Q ss_pred ceEEEeeccceEEEeccCCCCCCCceeeEEEEEE-eCCccccceE--EecccceEEEeCCCCCcEEEEEEEEEcCCCCC-
Q psy8771 626 DLRAVDIQETAVTLAWSKPTHSGENIISYELYWN-DTYAKAKHHR--RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG- 701 (904)
Q Consensus 626 ~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~-~~~~~~~~~~--~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~- 701 (904)
.+..+.+|.|+|+ ..+...+... .......+.|.+|+|++.|.|+|+|++..|.|
T Consensus 141 ---------------------~~~~~l~Y~v~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~~~Vra~~~~g~G~ 199 (215)
T 1cd9_B 141 ---------------------SEYMEQECELRYQPQLKGANWTLVFHLPSSKDQFELCGLHQAPVYTLQMRCIRSSLPGF 199 (215)
T ss_dssp ---------------------GTTSCEEEEEEEEESSTTCCCEEEEEEESCEEEEEECCCCSCSCEEEEEEEEESSSCCC
T ss_pred ---------------------CCeEEEEEEEEEccCCCCCCcEEEecccCcceEEEEcCCCCCCEEEEEEEeeECCCCCC
Confidence 2333479999998 5555554322 23445789999999999999999999986664
Q ss_pred --CCCCCeeEEecCC
Q psy8771 702 --ATTPPIPVRTKQY 714 (904)
Q Consensus 702 --~~s~~~~~~t~~~ 714 (904)
.+|..+.++|.+.
T Consensus 200 wS~wS~~~~~~T~e~ 214 (215)
T 1cd9_B 200 WSPWSPGLQLRPTMK 214 (215)
T ss_dssp CCCCCCCEEECCCC-
T ss_pred CcCCCCccceecCCC
Confidence 5777888888654
No 74
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.69 E-value=7.9e-15 Score=175.86 Aligned_cols=261 Identities=17% Similarity=0.183 Sum_probs=167.5
Q ss_pred CcceeeeccceEEEEecC----CCCCcc-eeeEeeCCCCCCCCcEEEeccCCceEEEEeCCCC----CCCceeccccccc
Q psy8771 2 DTRCYVESPEEVFIILCP----LPPLIP-GYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPET----PNGQITHPPTRAA 72 (904)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~----~~p~~~-~~~~~~~p~~~p~~l~~~~~~~~s~~v~W~~~~~----~~g~i~~~~~~~~ 72 (904)
.|+|.+.+.......-.. .+|... ..-......+.+..|.|...+.+...|.|.+... .++.+........
T Consensus 320 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~~~~~~~L~i~~v~~~ 399 (816)
T 3dmk_A 320 KYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHSESVLRIESVKKE 399 (816)
T ss_dssp EEEEEEECSSCEEEEEEEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEECCCEEEEEETTEECSCCSSEEEESSCCGG
T ss_pred EEEEEEEcCCCceEEEEEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccCCCEEEEEECCEECCCCCCEEEEcCCCHH
Confidence 489999887654322111 111110 0011122234677788888788889999987532 2334544445555
Q ss_pred ccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc
Q psy8771 73 RSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK 152 (904)
Q Consensus 73 ~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~ 152 (904)
+.....|...+..........+.+. ....||.|...+.+ ..+.+|+.+.|.|.+.|.|.|.|+|+|+ +..+....+
T Consensus 400 d~G~Y~C~a~n~~g~~~~~~~l~v~--~~~~~p~i~~~~~~-~~v~~G~~v~L~C~~~g~p~p~v~W~~~-g~~l~~~~~ 475 (816)
T 3dmk_A 400 DKGMYQCFVRNDRESAEASAELKLG--GRFDPPVIRQAFQE-ETMEPGPSVFLKCVAGGNPTPEISWELD-GKKIANNDR 475 (816)
T ss_dssp GCEEEEEEEECSSCEEEECCEEECC--CSSCCCEEEEECCC-EEECSSSCEEEEEEEECSSCCEEEEEET-TEECCSCTT
T ss_pred HCEEEEEEEECCCCcEEEEEEEEEc--cccCCCceEecCcc-eEEcCCCCEEEEEEEecCCCCEEEEEEC-CEECCCCCC
Confidence 5555555555443333334444442 23578888888887 8999999999999999999999999999 777766666
Q ss_pred eeec---------ceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCC--CCcceEEEeecCCeEEE
Q psy8771 153 LPVG---------RNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPV--APLDVKISEVTATSVRL 219 (904)
Q Consensus 153 ~~~~---------~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~--~p~~l~~~~~~~~sv~l 219 (904)
+... ...|.|.++ +|+|.|+|.|.|..|....++.|.|. ..|. .+....+ .....+.|
T Consensus 476 ~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-------~~p~~~~~~~~~v--~~G~~v~l 546 (816)
T 3dmk_A 476 YQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVY-------GLPYIRQMEKKAI--VAGETLIV 546 (816)
T ss_dssp EEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEEC-------SSCEECCCCCEEE--ETTCCEEE
T ss_pred cccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEe-------cCCeeEccCCeEE--ecCCeEEE
Confidence 5431 136999998 69999999999999999999999887 3321 2223323 34456777
Q ss_pred EEeCCCccceEEEEEEEeCCCCC---CeEEeecceeceEEEcCCC-CCCeEEEEEEEEcCCCCC
Q psy8771 220 DWTYPSETLLYYVIQYKPKAANT---PYSEISGIITTYYTVRNLS-PYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 220 ~W~~~~~~~~~y~v~~~~~~~~~---~~~~~~~~~~~~~~i~~L~-p~~~Y~~~v~a~n~~g~s 279 (904)
.+...+.+.. .+.|...+... ...... ....+.|.++. ..+.+.|+|.|.|..|.+
T Consensus 547 ~C~~~g~p~~--~i~W~k~~~~l~~~~~~~~~--~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~ 606 (816)
T 3dmk_A 547 TCPVAGYPID--SIVWERDNRALPINRKQKVF--PNGTLIIENVERNSDQATYTCVAKNQEGYS 606 (816)
T ss_dssp ECCEECSSEE--EEEEEETTEESCCSTTEEEC--TTSEEEESSCCHHHHCEEEEEEEEESSSCE
T ss_pred EEEecCCCCC--EEEEEECCeEcccCCceEEe--cCCeEEEEecCccccCEEEEEEEEECCCce
Confidence 7765443333 45555442211 111111 23569999998 689999999999998854
No 75
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.68 E-value=5.7e-17 Score=160.29 Aligned_cols=167 Identities=16% Similarity=0.172 Sum_probs=107.9
Q ss_pred CCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEE
Q psy8771 647 SGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCE 726 (904)
Q Consensus 647 ~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~ 726 (904)
.+..+.+|.|++................+++++.+|.|++.|.|+|+|+|..|.|.+|....+.+....|..+|.. .+.
T Consensus 18 ~~~~Vt~Y~~~~~~~~~~~~~~~~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~~~-~~~ 96 (232)
T 4go6_B 18 TNVMVTHYFLPPDDAVPSDDDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCA-IKI 96 (232)
T ss_dssp SEEEECEEECCCC------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTTSCCCCEE-EEE
T ss_pred CCEEEEEEEEEeeCCCCCcEEEEECCCccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCCCCCCCee-eEE
Confidence 4556888988876554443344444556789999999999999999999999999999888888876656555554 444
Q ss_pred ecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCcc---------EEEEec----Ccc-------eEEecCCCCCc
Q psy8771 727 PLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEA---------SIVTLK----NQT-------SFVLDELKKWT 786 (904)
Q Consensus 727 ~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~---------~~~~~~----~~~-------~~~i~~L~p~t 786 (904)
..+.+++.|+|.+| ...+|.|.+|.|+|+......... .+..+. ... .+.+.+|.+++
T Consensus 97 ~~~~~sv~l~W~~P--~~~~G~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~t 174 (232)
T 4go6_B 97 SKSPDGAHLTWEPP--SVTSGKIIEYSVYLAIQSSQAGGELKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKP 174 (232)
T ss_dssp EEETTEEEEEEECC--SCCSSCCCEEEEEEEEC-------------CCEEEEEEEEESSSEEEEEHHHHTTBCBEESSSE
T ss_pred ecCCCEEEEEEeCC--CCCCCceeeEEEEEEECCCCCcceeeeccCCceeeEEEEeccCceEEEEccccEEeeecCccCC
Confidence 56789999999999 457899999999998765332111 111111 112 22356899999
Q ss_pred eEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771 787 EYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816 (904)
Q Consensus 787 ~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P 816 (904)
.|.|||+|.|..|.|++|+...+.+.+..|
T Consensus 175 ~Y~frV~A~N~~G~Gp~S~v~t~~~~~~~p 204 (232)
T 4go6_B 175 AIIFRIAARNEKGYGPATQVRWLQETSKDS 204 (232)
T ss_dssp EEEEEEEEECSSCBCCCEEEEEECC-----
T ss_pred ceEEEEEEECCCcCCCCcccEEeccCCCCC
Confidence 999999999999999998866666555444
No 76
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=99.65 E-value=1.8e-13 Score=143.65 Aligned_cols=262 Identities=12% Similarity=0.111 Sum_probs=164.0
Q ss_pred CCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCC--eEEEEEEEEeCCCCCCCCCcE
Q psy8771 494 SSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHT--IYTIRVQAFTSVGPGPLSAPV 571 (904)
Q Consensus 494 ~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t--~Y~~~V~a~~~~g~~~~S~~~ 571 (904)
....+.|........ ....|.|...+........... .....+.|.++.... .|.+. ..|.-..+..+
T Consensus 20 ~G~~v~l~C~~~~~~----~~~~i~W~~~~~~~~~~~~~~~-~~~~~L~i~~v~~~d~G~Y~C~-----~~g~~~~~~~L 89 (325)
T 1n26_A 20 PGDSVTLTCPGVEPE----DNATVHWVLRKPAAGSHPSRWA-GMGRRLLLRSVQLHDSGNYSCY-----RAGRPAGTVHL 89 (325)
T ss_dssp TTCCEEEECTTSCTT----CCSEEEEEEECSSSSCCCEEEE-EESSEEEECSCCGGGCEEEEEE-----SSSSCSCEEEE
T ss_pred CCCcEEEEeCCCCCC----CCceEEEEECCccCCccccccc-cccceEEecccchhhCeEeEEE-----eCCEEeeeEEE
Confidence 346777777653211 2244566554322111111111 223457788877543 56554 23432222222
Q ss_pred EEecCCCCCCCCCCceEEe-cCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCc
Q psy8771 572 LVKTQQGVPSQPRDLRAVD-IQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGEN 650 (904)
Q Consensus 572 ~~~t~~~~p~~p~~~~~~~-~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~ 650 (904)
.+ ..+|.+|. +.+.. .....+.++|.++.+ .+.
T Consensus 90 ~V---~~pP~~P~-l~c~~~~~~~~~~c~W~~~~~------------------------------------------~~~ 123 (325)
T 1n26_A 90 LV---DVPPEEPQ-LSCFRKSPLSNVVCEWGPRST------------------------------------------PSL 123 (325)
T ss_dssp EE---CCCCCCCC-CEEEBSSTTSCEEEEECCSSC------------------------------------------CCT
T ss_pred Ee---ccCCCCCc-eeEEeecCCCcEEEEECCCCC------------------------------------------CCC
Confidence 22 23566666 76653 346689999997653 223
Q ss_pred eeeEEEEEEeCCcc---ccceEE----ecccceEEEeCCC-CCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCC
Q psy8771 651 IISYELYWNDTYAK---AKHHRR----IGLVETYSLTGLY-PNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQN 722 (904)
Q Consensus 651 ~~~y~v~~~~~~~~---~~~~~~----~~~~~~~~l~~L~-p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~ 722 (904)
...|.|.|+...+. .+.... .....++.+..|. +++.|.|+|.|.|..|.+. +....+.+....++.||.+
T Consensus 124 ~~~y~l~~~~~~~~~~~~~~~~c~~~~~~~~~~c~i~~~~~~~~~Y~f~v~A~N~~G~~~-s~~~~~~~~~~v~P~pP~~ 202 (325)
T 1n26_A 124 TTKAVLLVRKFQNSPAEDFQEPCQYSQESQKFSCQLAVPEGDSSFYIVSMCVASSVGSKF-SKTQTFQGCGILQPDPPAN 202 (325)
T ss_dssp TCEEEEEEEEESSSSCEEEEEEEEEETTTTEEEEEECCCTTCCCEEEEEEEEEETTEEEE-CCCEEEETTTCBCCCCCEE
T ss_pred CceEEEEEEEccCCCCCcccccCCCCCCCCCEEEEECCCcccCcEEEEEEEEEcCCCCcc-cCcEEEeeccccCCCCCcc
Confidence 46777777654211 111111 1234578888876 7899999999999998764 4455666555555668999
Q ss_pred cEEEecCC--CEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCC
Q psy8771 723 VSCEPLSS--TSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIG 799 (904)
Q Consensus 723 l~~~~~~~--~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g 799 (904)
+.+...+. +++.|+|++|.....++.+.+|+|+|+..+...| ....+. ..+.+.|.+|.|++.|.|+|+|.|..|
T Consensus 203 l~v~~~~~~~~sv~lsW~~p~~~~~~~~~~~Y~V~yr~~~~~~W--~~~~~~~~~~~~~l~~L~p~t~Y~~rVrA~n~~g 280 (325)
T 1n26_A 203 ITVTAVARNPRWLSVTWQDPHSWNSSFYRLRFELRYRAERSKTF--TTWMVKDLQHHCVIHDAWSGLRHVVQLRAQEEFG 280 (325)
T ss_dssp EEEEECTTCTTCEEEEEECCTTCCCSSSCEEEEEEEEETTCSCC--EEEECGGGCSEEEESSCCTTCCEEEEEEEEETTT
T ss_pred eEEEEecCCCCEEEEEECCCCccCCCcEeEEEEEEEEeCCCCCC--EEEcccCCceEEEEeCCCCCCeEEEEEEEecCCC
Confidence 99987653 6999999999643356678999999998865444 333444 678899999999999999999999888
Q ss_pred CCCC---CCcEEeecCCC
Q psy8771 800 DGPS---SYPITIRTHED 814 (904)
Q Consensus 800 ~g~~---s~~~~~~t~~~ 814 (904)
.|.+ |+++.++|...
T Consensus 281 ~G~~S~wS~~~~~~~~~~ 298 (325)
T 1n26_A 281 QGEWSEWSPEAMGTPWTE 298 (325)
T ss_dssp BSCCCCCCCCEEECCCCC
T ss_pred CCCCcCCCCccceecCCC
Confidence 6655 56666665443
No 77
>4go6_B HCF C-terminal chain 1; tandem fibronectin repeat, protein interaction, transcriptio protein binding; 2.70A {Homo sapiens}
Probab=99.65 E-value=3e-16 Score=155.06 Aligned_cols=182 Identities=16% Similarity=0.166 Sum_probs=101.2
Q ss_pred CCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCce
Q psy8771 508 PNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLR 587 (904)
Q Consensus 508 ~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~ 587 (904)
.++.|.+|.|++..... ..+........+++.+.+|.|++.|.|+|+|+|..|.|++|....+.+....|+.|..+.
T Consensus 18 ~~~~Vt~Y~~~~~~~~~---~~~~~~~~~~~t~~~~~~L~p~t~Y~frV~A~n~~G~g~~s~~~~~~t~~~~~~~~~~~~ 94 (232)
T 4go6_B 18 TNVMVTHYFLPPDDAVP---SDDDLGTVPDYNQLKKQELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAI 94 (232)
T ss_dssp SEEEECEEECCCC---------------------CEEECCTTCEEEEEEEEEETTEEEEECCCEEEECCCTTSCCCCEEE
T ss_pred CCEEEEEEEEEeeCCCC---CcEEEEECCCccEEEeCCCCCCCEEEEEEEEEeCCCccccccceeeeecCCCCCCCCeee
Confidence 34567889887655432 222333345667899999999999999999999999999998888877655444444445
Q ss_pred EEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccc
Q psy8771 588 AVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKH 667 (904)
Q Consensus 588 ~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~ 667 (904)
....+.+++.|+|.+|..+||.|.+|.|+++........... . .......+.-.+... ...
T Consensus 95 ~~~~~~~sv~l~W~~P~~~~G~i~~Y~v~~~~~~~~~~~~~~-------------~---~~~~~~~~~~~~~~~---~~~ 155 (232)
T 4go6_B 95 KISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSSQAGGELK-------------S---STPAQLAFMRVYCGP---SPS 155 (232)
T ss_dssp EEEEETTEEEEEEECCSCCSSCCCEEEEEEEEC-----------------------------CCEEEEEEEEES---SSE
T ss_pred EEecCCCEEEEEEeCCCCCCCceeeEEEEEEECCCCCcceee-------------e---ccCCceeeEEEEecc---Cce
Confidence 556678899999999988655555555554321000000000 0 000000000000000 000
Q ss_pred eEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEe
Q psy8771 668 HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRT 711 (904)
Q Consensus 668 ~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t 711 (904)
...........+.+|.+++.|.|+|+|+|..|.|++|....+.+
T Consensus 156 ~~~~~~~l~~~~~~L~~~t~Y~frV~A~N~~G~Gp~S~v~t~~~ 199 (232)
T 4go6_B 156 CLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQE 199 (232)
T ss_dssp EEEEHHHHTTBCBEESSSEEEEEEEEEECSSCBCCCEEEEEECC
T ss_pred EEEEccccEEeeecCccCCceEEEEEEECCCcCCCCcccEEecc
Confidence 11111223344568999999999999999999998875433333
No 78
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=6.7e-16 Score=136.27 Aligned_cols=121 Identities=39% Similarity=0.509 Sum_probs=106.5
Q ss_pred EEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEE
Q psy8771 691 WLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT 770 (904)
Q Consensus 691 ~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~ 770 (904)
+|+|+|..|.|.+|..+.+.|.+..|..+|.++++...+.+++.|+|++|..+..+|.+.+|.|+|+..+...+ . ..
T Consensus 3 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~--~-~~ 79 (124)
T 2ed9_A 3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRRGE--M-ET 79 (124)
T ss_dssp SCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSSCC--E-EE
T ss_pred eEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCCcc--e-EE
Confidence 57899999999999999999999999888999999999999999999999654478999999999999765443 2 22
Q ss_pred ec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771 771 LK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814 (904)
Q Consensus 771 ~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~ 814 (904)
+. ..+.+.|.+|+|++.|.|+|+|.|..|.|++|.++.++|.++
T Consensus 80 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~ed 124 (124)
T 2ed9_A 80 LEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPEN 124 (124)
T ss_dssp ECSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCCC
T ss_pred ecCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCC
Confidence 44 888999999999999999999999999999999999999753
No 79
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=99.62 E-value=1e-14 Score=140.12 Aligned_cols=181 Identities=15% Similarity=0.226 Sum_probs=134.7
Q ss_pred CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQAFTS 561 (904)
Q Consensus 483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a~~~ 561 (904)
.+|.++.+...+. ...|+|++|.+.++++ .|.|+|+.. ..|...-. ...+.+.|.+|.+++.|.|+|+|.++
T Consensus 3 p~P~nv~~~s~n~-~~iL~W~pp~~~~~~v-~Y~V~y~~~-----~~w~~~c~~~~~~~c~lt~l~~~~~Y~~rV~A~~~ 75 (201)
T 3lqm_A 3 PPPENVRMNSVNF-KNILQWESPAFAKGQL-TFTAQYLSY-----RIFQDKCMQTTLTECDFSSLSKYGDHTLRVRAEFA 75 (201)
T ss_dssp CCCEEEEEEEETT-EEEEEEECCCCSSSCC-EEEEEEEET-----TEEEEEEEEESSSEEECTTSCSSSCEEEEEEEEET
T ss_pred CCCcccEEEEECC-ceEEEECCCCCCCCCe-EEEEEEEEC-----CCcccCcCccCCCEEECCCCccCCCEEEEEEEecC
Confidence 4789999887775 5679999988776765 499999985 24654322 45678999999999999999999999
Q ss_pred CCCCCCCCcEEEec-CCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEe
Q psy8771 562 VGPGPLSAPVLVKT-QQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLA 640 (904)
Q Consensus 562 ~g~~~~S~~~~~~t-~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~ 640 (904)
.|.|.++.. .+.. ....+.+| .+.+.. ..++|.|.|.+|...
T Consensus 76 ~~~S~~s~~-~f~~~~~t~~~PP-~v~~~~-~~~si~v~w~~P~~~---------------------------------- 118 (201)
T 3lqm_A 76 DEHSDWVQI-TFSPVDDTIIGPP-GMQVEV-LADCLHMRFLAPKIE---------------------------------- 118 (201)
T ss_dssp TEECCCEEE-EECHHHHSBCCCC-EEEEEE-ETTEEEEEEECCEEE----------------------------------
T ss_pred CCcCcceee-eeeecccCeeCCC-EEEEEE-eCCEEEEEEcCCCcc----------------------------------
Confidence 888877753 3432 12334545 677744 567999999988521
Q ss_pred ccCCCCCCC---------ceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcC--CCCCCCCCCeeE
Q psy8771 641 WSKPTHSGE---------NIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP--RGEGATTPPIPV 709 (904)
Q Consensus 641 w~~~~~~~~---------~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~--~G~~~~s~~~~~ 709 (904)
.++ .+..|.|.|+..+..... ........+.|.+|+|++.|.|+|+|.+. .|.|.+|..+.+
T Consensus 119 ------~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~~-~~~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~ 191 (201)
T 3lqm_A 119 ------NEYETWTMKNVYNSWTYNVQYWKQGTDEKF-QITPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCE 191 (201)
T ss_dssp ------CSSCEEEHHHHCTTCEEEEEEEETTCCCCE-EECCSSSEEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEE
T ss_pred ------CCCcccCHHHhCCceEEEEEEEECCCCcEE-EEEecCceEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeE
Confidence 112 267999999886554432 33345578999999999999999999996 578899998888
Q ss_pred EecCC
Q psy8771 710 RTKQY 714 (904)
Q Consensus 710 ~t~~~ 714 (904)
.|..+
T Consensus 192 ~T~~~ 196 (201)
T 3lqm_A 192 QTTHD 196 (201)
T ss_dssp ECCCG
T ss_pred EeCCC
Confidence 88654
No 80
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=6.2e-15 Score=128.70 Aligned_cols=115 Identities=25% Similarity=0.318 Sum_probs=99.2
Q ss_pred CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceE
Q psy8771 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSF 777 (904)
Q Consensus 699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~ 777 (904)
|.|.+|..+.+.|.+..|..+|.++++...+.+++.|+|++|. . |.+.+|.|+|+..+..........+. ..+.+
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~--~--g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 76 (119)
T 2ee2_A 1 GSSGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVL--E--KIVESYQIRYWAAHDKEEAANRVQVTSQEYSA 76 (119)
T ss_dssp CCCCCSSCCCCCCCSCCCCCCCCSCEEEEEETTEEEEECCCCS--C--TTCCEEEEEEEESSSCGGGCEEEEEETTCSEE
T ss_pred CCCCCCCCEEEECCCcCCCCCCCcEEEEEccCCEEEEEecCCC--C--CccceEEEEEEECCCcccCcEEEEcCCCEeEE
Confidence 6788898999999999999889999999999999999999994 2 78999999999876433333344444 77899
Q ss_pred EecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771 778 VLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817 (904)
Q Consensus 778 ~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~ 817 (904)
.|.+|++++.|.|+|+|.|..|.|++|..+.++|...+|.
T Consensus 77 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp 116 (119)
T 2ee2_A 77 RLENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASGP 116 (119)
T ss_dssp EECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCCS
T ss_pred EECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCCC
Confidence 9999999999999999999999999999999999887764
No 81
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=1.1e-14 Score=130.66 Aligned_cols=128 Identities=31% Similarity=0.500 Sum_probs=108.1
Q ss_pred CCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCC--CCCCCceeeEEEEEEeCCCCCCcceEEEe--ecCce
Q psy8771 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQV--VDNNQ 539 (904)
Q Consensus 464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~ 539 (904)
|.|.+|..+.+.|....|..+|.++++...+.+++.|+|++| ...+|.+.+|.|+|+..+..... +.... ....+
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~ 79 (134)
T 2edx_A 1 GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRG-RHVVDGISREHS 79 (134)
T ss_dssp CCCCCCCCCCCSSCCSCCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCC-CEEECCCBTTCS
T ss_pred CCCCCcCCEEEEeCCCCCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcc-cEEEEeeCCCcc
Confidence 567788888999988888778999999999999999999998 66778999999999987643222 22222 35678
Q ss_pred EEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCC-CCCCCceEEecC
Q psy8771 540 LTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP-SQPRDLRAVDIQ 592 (904)
Q Consensus 540 ~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p-~~p~~~~~~~~~ 592 (904)
.+.|.+|.|++.|.|+|+|+|..|.|++|..+.++|....| .+|.++++..++
T Consensus 80 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~s 133 (134)
T 2edx_A 80 SWDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVPSGPPRKVESGPSS 133 (134)
T ss_dssp EEEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCCSSCCCCCCCCCCCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCCCCCCCCceeEEEEcc
Confidence 89999999999999999999999999999999999999888 689999887654
No 82
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=6e-15 Score=129.68 Aligned_cols=116 Identities=23% Similarity=0.306 Sum_probs=97.1
Q ss_pred CCCCCCCCeeEEecCCCCCCCCCCcEEE-ecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-Ccce
Q psy8771 699 GEGATTPPIPVRTKQYVPGAPPQNVSCE-PLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTS 776 (904)
Q Consensus 699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~-~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~ 776 (904)
|.|.+|..+.++|.+.+|..+|.++++. ..+.++|.|+|++|+.+..||.+.+|.|+|+..+..........+. ..+.
T Consensus 1 G~g~~S~~v~~~T~~~~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~ 80 (124)
T 2dbj_A 1 GSSGSSGWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEEVGQNGSR 80 (124)
T ss_dssp CCSCCCCCCCCCCSSCCCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEEEEESTTSC
T ss_pred CcCCCCCCEEEEccCCCCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEEEeCCCcce
Confidence 6788899999999999999889999998 6889999999999976678999999999997543221111111233 7789
Q ss_pred EEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771 777 FVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814 (904)
Q Consensus 777 ~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~ 814 (904)
+.|.+|.+++.|.|+|+|+|..|.|++|.++.++|.++
T Consensus 81 ~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 81 ARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp EEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred EEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 99999999999999999999999999999999999765
No 83
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.61 E-value=1.1e-14 Score=130.61 Aligned_cols=118 Identities=42% Similarity=0.802 Sum_probs=102.1
Q ss_pred CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEE-ec-Ccce
Q psy8771 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT-LK-NQTS 776 (904)
Q Consensus 699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~-~~-~~~~ 776 (904)
|.|.+|..+.++|.+..|..+|.++++...+.+++.|+|++|.....+|.+.+|.|+|+..+.......... +. ..+.
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 80 (134)
T 2edx_A 1 GSSGSSGTIEARTAQSTPSAPPQKVMCVSMGSTTVRVSWVPPPADSRNGVITQYSVAYEAVDGEDRGRHVVDGISREHSS 80 (134)
T ss_dssp CCCCCCCCCCCSSCCSCCSSCSEEEEEECSSSSEEEEEEECCCSTTCSSCEEEEEEEEEESSSSCCCCEEECCCBTTCSE
T ss_pred CCCCCcCCEEEEeCCCCCCCCCcccEEEeCCCCEEEEEecCCCccCCCCceeEEEEEEEECCCCCcccEEEEeeCCCccE
Confidence 678889999999999999878999999999999999999999655678999999999998765443333232 23 7899
Q ss_pred EEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771 777 FVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816 (904)
Q Consensus 777 ~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P 816 (904)
++|.+|.+++.|.|+|+|.|..|.|++|..+.++|...+|
T Consensus 81 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P 120 (134)
T 2edx_A 81 WDLVGLEKWTEYRVWVRAHTDVGPGPESSPVLVRTDEDVP 120 (134)
T ss_dssp EEEESCCTTCEEEEEEEEEETTBCCCCCCCEEEECCCCSS
T ss_pred EEeCCCCCCCEEEEEEEEEcCCCcCCCCCCEEeecCCCCC
Confidence 9999999999999999999999999999999999998877
No 84
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.61 E-value=1.9e-15 Score=134.54 Aligned_cols=123 Identities=25% Similarity=0.433 Sum_probs=105.1
Q ss_pred EEEEEcCCCCCCCCC-CeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEE
Q psy8771 691 WLAAQSPRGEGATTP-PIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIV 769 (904)
Q Consensus 691 ~V~a~~~~G~~~~s~-~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~ 769 (904)
.|+|+|..|.|.+|. .+.++|...+|. +|.++.+...+.+++.|+|++| ...+|.+.+|.|+|+..+.........
T Consensus 2 sV~A~n~~G~g~~S~~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~ 78 (130)
T 1wfo_A 2 SSGSSGRIGDGSPSHPPILERTLDDVPG-PPMGILFPEVRTTSVRLIWQPP--AAPNGIILAYQITHRLNTTTANTATVE 78 (130)
T ss_dssp CCCCCCCCCCCCCCCCCSCCCCSCCCCC-CCCCCEEEEECSSEEEEECCCC--SCCCSCCCEEEEEEEESSCCCSCCCEE
T ss_pred eeEEEecccCCCCCCCcEEEEcCCCCCC-CCCceEEEecCCCEEEEEEcCC--CCCCCceEEEEEEEEECCCCCceEEEE
Confidence 478999999999887 488999998886 7899999999999999999998 457889999999999876543323333
Q ss_pred Eec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771 770 TLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816 (904)
Q Consensus 770 ~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P 816 (904)
.+. ..+.++|.+|+|++.|.|+|+|.|..|.|++|..+.++|....|
T Consensus 79 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 126 (130)
T 1wfo_A 79 VLAPSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRSG 126 (130)
T ss_dssp EECTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCCC
T ss_pred EeCCCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCCC
Confidence 444 88999999999999999999999999999999998999987765
No 85
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.60 E-value=1.3e-13 Score=142.20 Aligned_cols=245 Identities=16% Similarity=0.221 Sum_probs=157.6
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a 175 (904)
..||.|...|.+ +.+.+|+.++|.|.+.|.|.+.|+|+|+ +..+....++.+ +...|.|.++ +|+|.|+|.|
T Consensus 3 ~~pP~~~~~p~~-~~~~~G~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~ 80 (284)
T 2rik_A 3 MAPPFFDLKPVS-VDLALGESGTFKCHVTGTAPIKITWAKD-NREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYA 80 (284)
T ss_dssp CCCCEEEECCCC-EEEETTCCEEEEEEEESSSCCEEEEEET-TEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred cCCCEEEccccc-eEecCCCcEEEEEEEEcCCCCEEEEEEC-CEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEE
Confidence 468999999988 9999999999999999999999999999 767766555443 3578999998 6999999999
Q ss_pred EecCcceEEEEEEEEEeecCCCCCCCC----CCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEe
Q psy8771 176 ASVLGVIETSTIVKVQCKYAPLLTLPV----APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEI 247 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~~~~~~~~~~P~----~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~ 247 (904)
.|..|..+..+.|.|. ..|. .+....+ .....+.|.+...+.+.. .+.|...+. ...+...
T Consensus 81 ~n~~g~~~~~~~l~V~-------~~p~~~~~~~~~~~v--~~g~~~~l~C~~~g~p~~--~v~W~~~~~~~~~~~~~~~~ 149 (284)
T 2rik_A 81 SNVAGKDSCSAQLGVQ-------EPPRFIKKLEPSRIV--KQDEHTRYECKIGGSPEI--KVLWYKDETEIQESSKFRMS 149 (284)
T ss_dssp EETTEEEEEEEEEEEE-------CCCEEEECCCSEEEE--ETTCCEEEEEEEESSSCC--EEEEEETTEECCCSSSEEEE
T ss_pred EECCceEEEEEEEEcc-------CCCcccccCCCceEe--cCCceEEEEEEEeeeCCC--EEEEEECCEECcCCCcEEEE
Confidence 9999998888888887 3331 1111112 223344555544322222 244433321 1222222
Q ss_pred ecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeE
Q psy8771 248 SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA 327 (904)
Q Consensus 248 ~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~ 327 (904)
.......+.|.++...+.+.|+|.|.|..|....+..+.+...+. ....|....+. ....+.|.+.....+...+.+
T Consensus 150 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~-~~~~~~~~~~~--~g~~v~l~C~~~g~p~~~v~W 226 (284)
T 2rik_A 150 FVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPV-FRKKPHPVETL--KGADVHLECELQGTPPFQVSW 226 (284)
T ss_dssp EETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCB-CCSCCCCEEEC--TTCCEEEEEECBSSSCCEEEE
T ss_pred EcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCc-ceeCCCcceec--CCCeEEEEEEEEecCCCEEEE
Confidence 223346799999999999999999999988643333333332211 11233333332 234466666554443334444
Q ss_pred EEE------------EeeceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771 328 KHH------------RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE 362 (904)
Q Consensus 328 ~~~------------~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~ 362 (904)
+.. ...+....+.|..+.....-.+++.|.|..|.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 273 (284)
T 2rik_A 227 HKDKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGS 273 (284)
T ss_dssp EETTEEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred EECCEECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCc
Confidence 321 11222346778888888888888899888774
No 86
>3d85_D IL-12B, interleukin-12 subunit P40, cytotoxic lymphocyte; FAB, immune system/cytokine complex; 1.90A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 3d87_B* 3duh_A* 1f42_A* 1f45_A* 3hmx_A* 3qwr_A*
Probab=99.60 E-value=1.3e-13 Score=141.62 Aligned_cols=114 Identities=14% Similarity=0.133 Sum_probs=71.5
Q ss_pred EEEEEEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCC-ceEEEEecCCCCCCCc----eeeEEEEEEeCCCCC
Q psy8771 452 LYYIWLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSS-STMVIQWDEPETPNGQ----ITGYKVYYTQDQSLP 526 (904)
Q Consensus 452 ~Y~~~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~-~~~~l~W~~p~~~~~~----i~~Y~v~~~~~~~~~ 526 (904)
.|.|+|.|.|..|.+.. ...+.....+.|.||.+|.+..... +.+.|+|++|...+.+ ...|+|+|+..+.
T Consensus 185 ~y~~~V~A~n~lg~~s~--~~~f~~~~iVkPdPP~~l~~~~~~~~~~l~vsW~~P~~~~~p~~~~~L~Y~vryr~~~~-- 260 (306)
T 3d85_D 185 PIEVMVDAVHKLKYEQY--TSSFFIRDIIKPDPPKNLQLKPLKNSRQVEVSWEYPDTWSTPHSYFSLTFCVQVQGKSK-- 260 (306)
T ss_dssp CEEEEEEEEETTEEEEE--EEEECHHHHBCCCCCEEEEEEEC----CEEEEEECCTTSCSCTTTSCEEEEEEEECC----
T ss_pred EEEEEEEEEccCCcccc--ceEEEehhcEecCCCceEEEEEecCCCcEEEEEcCCCCCcCCCceeeEEEEEEEEECCC--
Confidence 34555555555443211 1222222223457899999987543 7999999998655432 3799999998764
Q ss_pred CcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEE
Q psy8771 527 MSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLV 573 (904)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~ 573 (904)
..|........+++.| .+++.|.|+|||.+..|.|.||+....
T Consensus 261 -~~~~~~~~~~~ts~~l---~~~~~Y~vqVRa~~~~~~G~WSeWS~~ 303 (306)
T 3d85_D 261 -REKKDRVFTDKTSATV---ICRKNASISVRAQDRYYSSSWSEWASV 303 (306)
T ss_dssp -----CEEEESSSEEEE---CCCSSCEEEEEEEESSSCCCCCCCEEE
T ss_pred -CccEEEeeccccEEEE---eCCCeEEEEEEeccCCCCCCCCCCCCC
Confidence 2244444455566766 369999999999999888999987643
No 87
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.60 E-value=1e-14 Score=125.95 Aligned_cols=113 Identities=28% Similarity=0.373 Sum_probs=96.7
Q ss_pred CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEE
Q psy8771 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778 (904)
Q Consensus 699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 778 (904)
|.|.+|..+.++|.+.+|..+|.++++.. +.++|.|+|++|+.+..||.+.+|.|+|+..+.... . ......+.+.
T Consensus 1 G~G~~S~~v~~~T~e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~~--~-~~~~~~~~~~ 76 (117)
T 1wj3_A 1 GSSGSSGTVNVTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNNV--Q-VLNTNKTSAE 76 (117)
T ss_dssp CCCCCCCCCCCCCSCCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSSC--E-EEEESSSEEE
T ss_pred CcCCCCCCEEEEecCCCCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCCC--e-EEeCCCcEEE
Confidence 67888999999999999998999999877 888999999999766789999999999998764432 1 1112556788
Q ss_pred ecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816 (904)
Q Consensus 779 i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P 816 (904)
+. |.+++.|.|+|+|+|..|.|++|+++.++|..+.|
T Consensus 77 ~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~v~ 113 (117)
T 1wj3_A 77 LV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSG 113 (117)
T ss_dssp EE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCCCC
T ss_pred EE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCCC
Confidence 88 99999999999999999999999999999987655
No 88
>3lqm_A Interleukin-10 receptor subunit beta; IL-10R2, common chain, cytokine, IL-10, IL-22, IL- 28, IL-29, disulfide bond, glycoprotein, membrane; 2.14A {Homo sapiens}
Probab=99.60 E-value=1.6e-14 Score=138.76 Aligned_cols=183 Identities=15% Similarity=0.222 Sum_probs=134.4
Q ss_pred CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE-EecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771 621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR-RIGLVETYSLTGLYPNTLYYIWLAAQSPRG 699 (904)
Q Consensus 621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~-~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G 699 (904)
.++|++|.+...+.. ..|.|.++...++.+ .|.|+|...+ .+... .....+.+.|.+|.+++.|.++|+|.++.|
T Consensus 2 lp~P~nv~~~s~n~~-~iL~W~pp~~~~~~v-~Y~V~y~~~~--~w~~~c~~~~~~~c~lt~l~~~~~Y~~rV~A~~~~~ 77 (201)
T 3lqm_A 2 VPPPENVRMNSVNFK-NILQWESPAFAKGQL-TFTAQYLSYR--IFQDKCMQTTLTECDFSSLSKYGDHTLRVRAEFADE 77 (201)
T ss_dssp CCCCEEEEEEEETTE-EEEEEECCCCSSSCC-EEEEEEEETT--EEEEEEEEESSSEEECTTSCSSSCEEEEEEEEETTE
T ss_pred CCCCcccEEEEECCc-eEEEECCCCCCCCCe-EEEEEEEECC--CcccCcCccCCCEEECCCCccCCCEEEEEEEecCCC
Confidence 578999998877765 579999998766655 5999999862 33222 223457899999999999999999999888
Q ss_pred CCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCc---------cEEEEEEEEEEccCCCCccEEEE
Q psy8771 700 EGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNG---------HIVYYKLQFVETGRSDSEASIVT 770 (904)
Q Consensus 700 ~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g---------~~~~Y~v~~~~~~~~~~~~~~~~ 770 (904)
.|.++. ..+.........|| .+.+. ...++|.|.|.+|... .+| .+..|.|.|...+.... ...
T Consensus 78 ~S~~s~-~~f~~~~~t~~~PP-~v~~~-~~~~si~v~w~~P~~~-~~~~~~~~~~~~~~l~Y~v~y~~~~~~~~---~~~ 150 (201)
T 3lqm_A 78 HSDWVQ-ITFSPVDDTIIGPP-GMQVE-VLADCLHMRFLAPKIE-NEYETWTMKNVYNSWTYNVQYWKQGTDEK---FQI 150 (201)
T ss_dssp ECCCEE-EEECHHHHSBCCCC-EEEEE-EETTEEEEEEECCEEE-CSSCEEEHHHHCTTCEEEEEEEETTCCCC---EEE
T ss_pred cCccee-eeeeecccCeeCCC-EEEEE-EeCCEEEEEEcCCCcc-CCCcccCHHHhCCceEEEEEEEECCCCcE---EEE
Confidence 787764 33432211222355 57774 4568999999998521 223 26799999988654332 121
Q ss_pred ecCcceEEecCCCCCceEEEEEEEeeC--CCCCCCCCcEEeecCCC
Q psy8771 771 LKNQTSFVLDELKKWTEYRIWVLAGTS--IGDGPSSYPITIRTHED 814 (904)
Q Consensus 771 ~~~~~~~~i~~L~p~t~Y~~~V~a~~~--~g~g~~s~~~~~~t~~~ 814 (904)
......+.|.+|+|++.|.|+|+|.+. .|.|.+|.++.+.|.++
T Consensus 151 ~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~~ 196 (201)
T 3lqm_A 151 TPQYDFEVLRNLEPWTTYCVQVRGFLPDRNKAGEWSEPVCEQTTHD 196 (201)
T ss_dssp CCSSSEEEECSCCTTCEEEEEEEEEETTTTEECCCCCCEEEECCCG
T ss_pred EecCceEEEecCCCCCcEEEEEEEEeccCCCCCCcCCCEeEEeCCC
Confidence 226778999999999999999999996 68899999999998654
No 89
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=4.3e-15 Score=130.51 Aligned_cols=120 Identities=46% Similarity=0.831 Sum_probs=104.6
Q ss_pred CCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEE
Q psy8771 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543 (904)
Q Consensus 464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (904)
|.|.+|..+.+.|....|+.+|.++++..++.+++.|+|++|...++.+.+|.|+|+.........|........+.+.|
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i 80 (121)
T 2dlh_A 1 GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEPEEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQITTI 80 (121)
T ss_dssp CCCCCCSSSCSCCCCCCCCSCCEEEEECCCSSSBCCEEEECCSCCCSCEEEEEEECCSCTTSCTTTSCCCCCSSCSEECC
T ss_pred CCCCCCCCEEEECCCcCCCCCCcccEEEecCCCEEEEEECCCCCCCCcEeEEEEEEEeCCCCCccccEEEecCCceEEEe
Confidence 56788888999998888888999999999999999999999988888999999999987654444555544567788999
Q ss_pred cCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCC
Q psy8771 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583 (904)
Q Consensus 544 ~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p 583 (904)
.+|.|++.|.|+|+|+|..|.|.+|..+.++|..+.|.+|
T Consensus 81 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~P 120 (121)
T 2dlh_A 81 GNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGSGPSS 120 (121)
T ss_dssp BSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCCSCCC
T ss_pred cCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCCCCCC
Confidence 9999999999999999999999999999999998888776
No 90
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.59 E-value=7.2e-14 Score=144.13 Aligned_cols=230 Identities=20% Similarity=0.254 Sum_probs=152.1
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC---C-----------CceecccccccccceEEEEeeeccCCeeeeeeeeccCCCC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP---N-----------GQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVR 101 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~---~-----------g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~ 101 (904)
....|.|...+.+.+.|.|.+.... + +.+........+.....|...+........+.+.+
T Consensus 21 ~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V----- 95 (284)
T 2rik_A 21 ESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGV----- 95 (284)
T ss_dssp CCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEE-----
T ss_pred CcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECCceEEEEEEEEc-----
Confidence 5667777777777889999875211 1 12333333444444444555443333333444444
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a 175 (904)
..+|.+...+.....+.+|+.+.|.|.+.|.|.+.|.|+++ +..+....++.. ....|.|.++ +|+|.|+|.|
T Consensus 96 ~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 174 (284)
T 2rik_A 96 QEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKD-ETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEA 174 (284)
T ss_dssp ECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEET-TEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred cCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEEC-CEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEE
Confidence 45787776666547889999999999999999999999999 666666555442 4568999998 6999999999
Q ss_pred EecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEeecce
Q psy8771 176 ASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEISGII 251 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~~~~ 251 (904)
.|..|.....+.|.|.. .|... ..|....+. ....++|.+...+.+.. .+.|...+. ...+.......
T Consensus 175 ~n~~g~~~~~~~l~V~~--~p~~~--~~~~~~~~~--~g~~v~l~C~~~g~p~~--~v~W~~~~~~~~~~~~~~~~~~~~ 246 (284)
T 2rik_A 175 HNAAGSASSSTSLKVKE--PPVFR--KKPHPVETL--KGADVHLECELQGTPPF--QVSWHKDKRELRSGKKYKIMSENF 246 (284)
T ss_dssp ECSSCEEEEEEEEEEEC--CCBCC--SCCCCEEEC--TTCCEEEEEECBSSSCC--EEEEEETTEEECBTTTEEEEEETT
T ss_pred EcCCCceeEEEEEEEec--CCcce--eCCCcceec--CCCeEEEEEEEEecCCC--EEEEEECCEECcCCCCEEEEEcCC
Confidence 99999998888888882 11111 233344332 33456666665533332 344444321 22233333333
Q ss_pred eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
...+.|.++...+.+.|+|.|.|..|..
T Consensus 247 ~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 274 (284)
T 2rik_A 247 LTSIHILNVDSADIGEYQCKASNDVGSY 274 (284)
T ss_dssp EEEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred EEEEEEcCCCcccCEEEEEEEEeCCCce
Confidence 4689999999999999999999998864
No 91
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.58 E-value=7.7e-12 Score=143.70 Aligned_cols=232 Identities=11% Similarity=0.033 Sum_probs=135.4
Q ss_pred ccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCCcccc
Q psy8771 69 TRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQNIEL 147 (904)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~~~~~ 147 (904)
+...|...+.|...+...+....+.+.+ ..+|.|...+.. +.+.+|+.+.|.|.+.|.+ .+.|.|+|+++...
T Consensus 82 v~~~D~G~Y~C~~~n~~~~~~~~~~l~V-----~~~p~~~~~~~~-~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~ 155 (585)
T 2ocw_A 82 LSQDDSGRYKCGLGINSRGLSFDVSLEV-----SQGPGLLNDTKV-YTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYP 155 (585)
T ss_pred CCcccCEEEEEEcccCCCCceEEEEEEE-----ecCccccCCCcc-EEEEcCCCEEEEEEecCCCCCccEEEEECCCCCc
Confidence 3344444445555444444444445554 567888888887 9999999999999999765 57899999843211
Q ss_pred ----C--------CCCceee--cce-----EEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcc
Q psy8771 148 ----T--------PDDKLPV--GRN-----VLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLD 206 (904)
Q Consensus 148 ----~--------~~~~~~~--~~~-----~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~ 206 (904)
. ...|+.+ ++. +|.|.++ +|+|.|+|.|.|..|.....+.|.|. .. +|..
T Consensus 156 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~-------~~--~p~~ 226 (585)
T 2ocw_A 156 VLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVL-------KP--EPEL 226 (585)
T ss_pred eEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEc-------cC--CCce
Confidence 0 1233332 222 7999999 69999999999999998888888887 32 2434
Q ss_pred eEEEeecCCeEEEEEeCCCccceEEEEEEE-eCCC----------------CCCeEEeec--ceeceEEEcCCCCCCeEE
Q psy8771 207 VKISEVTATSVRLDWTYPSETLLYYVIQYK-PKAA----------------NTPYSEISG--IITTYYTVRNLSPYTEYE 267 (904)
Q Consensus 207 l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~-~~~~----------------~~~~~~~~~--~~~~~~~i~~L~p~~~Y~ 267 (904)
+.+.. ...+.|.+.........-.+.|. ..+. ...+..... .....+.|.++...+.+.
T Consensus 227 ~~~~~--G~~v~l~C~~~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~ 304 (585)
T 2ocw_A 227 VYEDL--RGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGR 304 (585)
T ss_pred eEEcC--CCcEEEEEEcCCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEE
Confidence 43332 34455555543211111233332 2211 111111111 112379999999999999
Q ss_pred EEEEEEcCCCCCC-----CCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCCCC
Q psy8771 268 FYIIAVNNLGRGP-----PSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETP 321 (904)
Q Consensus 268 ~~v~a~n~~g~s~-----~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~ 321 (904)
|+|.|.|. |... ....+.+...+. ....|..+.+.. ...+.|.+.....+
T Consensus 305 Y~C~a~n~-g~~~~~~~~~~~~l~V~~~p~-~~~~~~~~~~~~--G~~v~l~C~~~~~p 359 (585)
T 2ocw_A 305 YLCGAHSD-GQLQEGSPIQAWQLFVNEEST-IPRSPTVVKGVA--GSSVAVLCPYNRKE 359 (585)
T ss_pred EEEEEEcC-CCccccCceeeEEEEEecccc-cccCCcceEEEe--CCcEEEEEecCCCC
Confidence 99999995 4332 112222222211 122344443333 35577777664433
No 92
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.58 E-value=1.6e-14 Score=128.60 Aligned_cols=125 Identities=21% Similarity=0.384 Sum_probs=104.9
Q ss_pred EEEeeCCCCCCCCCC-ceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceE-EEe
Q psy8771 457 LAAQSPRGEGATTPP-IPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWE-TQV 534 (904)
Q Consensus 457 v~a~~~~g~~~~s~~-~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~ 534 (904)
|.|.|..|.+..+.. +.+.|....| .+|.++.+...+.+++.|+|++|...+|.+.+|.|+|+..+... ..|. ...
T Consensus 3 V~A~n~~G~g~~S~~~~~~~t~~~~P-~~P~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~-~~~~~~~~ 80 (130)
T 1wfo_A 3 SGSSGRIGDGSPSHPPILERTLDDVP-GPPMGILFPEVRTTSVRLIWQPPAAPNGIILAYQITHRLNTTTA-NTATVEVL 80 (130)
T ss_dssp CCCCCCCCCCCCCCCCSCCCCSCCCC-CCCCCCEEEEECSSEEEEECCCCSCCCSCCCEEEEEEEESSCCC-SCCCEEEE
T ss_pred eEEEecccCCCCCCCcEEEEcCCCCC-CCCCceEEEecCCCEEEEEEcCCCCCCCceEEEEEEEEECCCCC-ceEEEEEe
Confidence 678999999998874 7888877666 68999999999999999999999888889999999999876432 2232 234
Q ss_pred ecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCC
Q psy8771 535 VDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583 (904)
Q Consensus 535 ~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p 583 (904)
....+.+.|.+|.|++.|.|+|+|.|..|.|.+|..+.++|....|+.|
T Consensus 81 ~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp~p 129 (130)
T 1wfo_A 81 APSARQYTATGLKPESVYLFRITAQTRKGWGEAAEALVVTTEKRSGPSS 129 (130)
T ss_dssp CTTCCEEEEESCCSSSEEEEEEEEECSSCEEEEEEEEEECCSSCCCCCC
T ss_pred CCCceEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEecCCCCCCCC
Confidence 4678889999999999999999999999999999988899887766544
No 93
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=1.5e-14 Score=127.44 Aligned_cols=119 Identities=26% Similarity=0.359 Sum_probs=104.1
Q ss_pred EEEEeeCCCCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCC--CCCceeeEEEEEEeCCCCCCcceEEE
Q psy8771 456 WLAAQSPRGEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPET--PNGQITGYKVYYTQDQSLPMSAWETQ 533 (904)
Q Consensus 456 ~v~a~~~~g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~~~~ 533 (904)
+|.|.|..|.+..+..+.+.|....|..+|.++++...+.+++.|+|++|.. .++.+.+|.|+|+..... .|...
T Consensus 3 ~V~A~n~~G~g~~s~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~---~~~~~ 79 (124)
T 2ed9_A 3 SGSSGNRYGPGVSTDDITVVTLSDVPSAPPQNVSLEVVNSRSIKVSWLPPPSGTQNGFITGYKIRHRKTTRR---GEMET 79 (124)
T ss_dssp SCCCCCCCCCCCCCCCCCCCCCCCCCSSCCBSCCEEEEETTEEEEECBCCCTTTCCSCCCEEEEEEEESSSS---CCEEE
T ss_pred eEEEEeCCccCCCCCCEEEEcCCCCCCCCCeeeEEEEcCCCEEEEEEECcCCcCCCcEEeEEEEEEEECCCC---cceEE
Confidence 5789999999999999999998888877899999999999999999999876 678999999999987643 33344
Q ss_pred eecCceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCC
Q psy8771 534 VVDNNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQ 577 (904)
Q Consensus 534 ~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~ 577 (904)
.....+.+.|.+|.|++.|.|+|+|.|..|.|++|..+.++|..
T Consensus 80 ~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~e 123 (124)
T 2ed9_A 80 LEPNNLWYLFTGLEKGSQYSFQVSAMTVNGTGPPSNWYTAETPE 123 (124)
T ss_dssp ECSSCSEEEEECCCSSCEEEECEEEECSSCBCCCCCCEEEECCC
T ss_pred ecCCcCEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCC
Confidence 55677889999999999999999999999999999999998854
No 94
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=5.8e-14 Score=122.49 Aligned_cols=116 Identities=26% Similarity=0.383 Sum_probs=97.6
Q ss_pred CCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEE-EeecCceEEE
Q psy8771 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWET-QVVDNNQLTT 542 (904)
Q Consensus 464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~~~ 542 (904)
|.+..|..+.+.|....|+.+|.++++...+.+++.|+|++|.. +.+.+|.|+|+..+... ..+.. ......+.+.
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~--g~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~~ 77 (119)
T 2ee2_A 1 GSSGSSGVAVINSAQDAPSEAPTEVGVKVLSSSEISVHWEHVLE--KIVESYQIRYWAAHDKE-EAANRVQVTSQEYSAR 77 (119)
T ss_dssp CCCCCSSCCCCCCCSCCCCCCCCSCEEEEEETTEEEEECCCCSC--TTCCEEEEEEEESSSCG-GGCEEEEEETTCSEEE
T ss_pred CCCCCCCCEEEECCCcCCCCCCCcEEEEEccCCEEEEEecCCCC--CccceEEEEEEECCCcc-cCcEEEEcCCCEeEEE
Confidence 56778888899999989988999999999999999999999876 78999999998875432 22333 3335667899
Q ss_pred EcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCC
Q psy8771 543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQ 582 (904)
Q Consensus 543 ~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~ 582 (904)
|.+|.|++.|.|+|+|+|..|.|++|..+.++|...+|++
T Consensus 78 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~pp~ 117 (119)
T 2ee2_A 78 LENLLPDTQYFIEVGACNSAGCGPPSDMIEAFTKKASGPS 117 (119)
T ss_dssp ECSCCTTCEEEEEEEEECSSSCCCCCCCEEEECCCCCCSC
T ss_pred ECCCCCCCEEEEEEEEEcCCccCCCCCCEEEECCCCCCCC
Confidence 9999999999999999999999999999999998766553
No 95
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.57 E-value=1.2e-14 Score=123.14 Aligned_cols=88 Identities=30% Similarity=0.527 Sum_probs=79.7
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a 175 (904)
..||.|+..|.+ +.+.+|+++.|.|.+.|.|.|.|+|+|+ +..+..+.++.+ ....|.|.++ +|+|.|+|.|
T Consensus 11 ~~pP~f~~~p~~-~~v~~G~~~~l~C~~~G~P~p~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 88 (107)
T 3knb_B 11 GSPPCFLRFPRP-VRVVSGAEAELKCVVLGEPPPVVVWEKG-GQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRA 88 (107)
T ss_dssp CEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCCEEEeCCCc-EEEeCCCcEEEEEEEEEecCCEEEEEEC-cccccceeeEEEeecCceEEEEEecCChhhCEEEEEEE
Confidence 568999999998 9999999999999999999999999999 888887777765 2347999999 6999999999
Q ss_pred EecCcceEEEEEEEEE
Q psy8771 176 ASVLGVIETSTIVKVQ 191 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~ 191 (904)
.|..|..+.++.|.|.
T Consensus 89 ~N~~G~~~~~~~l~V~ 104 (107)
T 3knb_B 89 RNAAGEAYAAAAVTVL 104 (107)
T ss_dssp EETTEEEEEEEEEEEE
T ss_pred EECCCEEEEEEEEEEE
Confidence 9999999999999998
No 96
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.56 E-value=2.5e-14 Score=154.51 Aligned_cols=220 Identities=11% Similarity=0.162 Sum_probs=137.4
Q ss_pred CceEEEEeCCC------------CCCCceecccccccccceEEEEeeeccCCeeee---eeeecc--CCCCCCCCeEEc-
Q psy8771 48 STMVIQWDEPE------------TPNGQITHPPTRAARSHARLAAQSVLRRGRLAH---AVRQVA--DPVRRVPPQFSI- 109 (904)
Q Consensus 48 ~s~~v~W~~~~------------~~~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~~~v~--~~~~~~~P~~~~- 109 (904)
+.+.+.|.+.. ..+|.+........|...+.|...+........ ..+.+. ......+|.+..
T Consensus 131 ~~~~~~W~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~ 210 (384)
T 3kld_A 131 GELSYAWIFNEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQ 210 (384)
T ss_dssp SCEEEEEEETTEECCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEE
T ss_pred CCeEEEEEECCCCCEeeccEEEEcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeec
Confidence 45789996542 123445444455556566666655544332210 111111 011223454443
Q ss_pred CCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771 110 PPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTI 187 (904)
Q Consensus 110 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~ 187 (904)
.|.. +.+.+|+.+.|.|.+.|.|.|.|.|+|+++..+....+....++.|.|.++ +|+|.|+|.|.|..|.....+.
T Consensus 211 ~~~~-~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~ 289 (384)
T 3kld_A 211 FPET-VPAEKGTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQ 289 (384)
T ss_dssp CCSE-EEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred CCCc-eEecCCCcEEEEEEEeecCCCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEE
Confidence 3444 889999999999999999999999999656666655555556789999999 6999999999999999998889
Q ss_pred EEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEeecceeceEEEcCCCCC
Q psy8771 188 VKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEISGIITTYYTVRNLSPY 263 (904)
Q Consensus 188 l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~~~~~~~~~i~~L~p~ 263 (904)
|.|.... .+ ...+.+..+. ....+.|.+...+.+... +.|...+. ...+. .....+.|.++...
T Consensus 290 l~v~~~P--~~--~~~~~~~~v~--~g~~v~l~C~~~g~P~p~--i~W~k~g~~l~~~~~~~----~~~~~L~i~~v~~~ 357 (384)
T 3kld_A 290 LTFYAQP--NW--VQIINDIHVA--MEESVFWECKANGRPKPT--YRWLKNGDPLLTRDRIQ----IEQGTLNITIVNLS 357 (384)
T ss_dssp EEEEEEE--EE--EECCCCEEEC--TTCCEEEECEEEEESCCE--EEEEETTEECCCBTTEE----EETTEEEESSCCGG
T ss_pred EEEecCC--cc--ccCCCceEec--CCCCEEEEeECCccCCCe--EEEEECCEECCCCccEE----EeCCEEEEeecChh
Confidence 9887321 10 0123333332 234455555443222222 33433321 11111 12357999999999
Q ss_pred CeEEEEEEEEcCCCCCC
Q psy8771 264 TEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 264 ~~Y~~~v~a~n~~g~s~ 280 (904)
+.+.|+|.|.|..|...
T Consensus 358 D~G~Y~C~A~N~~G~~~ 374 (384)
T 3kld_A 358 DAGMYQCVAENKHGVIF 374 (384)
T ss_dssp GCEEEEEEEEETTEEEE
T ss_pred hCEEEEEEEEeCCceEE
Confidence 99999999999998654
No 97
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=7.6e-15 Score=128.88 Aligned_cols=117 Identities=28% Similarity=0.447 Sum_probs=98.8
Q ss_pred CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCc-cEEEEecCcceE
Q psy8771 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSE-ASIVTLKNQTSF 777 (904)
Q Consensus 699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~ 777 (904)
|.|.+|..+.++|.+..|..+|.++++...+.+++.|+|++| ...+|.+.+|.|+|+........ .........+.+
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 78 (121)
T 2dlh_A 1 GSSGSSGPVLTQTSEQAPSSAPRDVQARMLSSTTILVQWKEP--EEPNGQIQGYRVYYTMDPTQHVNNWMKHNVADSQIT 78 (121)
T ss_dssp CCCCCCSSSCSCCCCCCCCSCCEEEEECCCSSSBCCEEEECC--SCCCSCEEEEEEECCSCTTSCTTTSCCCCCSSCSEE
T ss_pred CCCCCCCCEEEECCCcCCCCCCcccEEEecCCCEEEEEECCC--CCCCCcEeEEEEEEEeCCCCCccccEEEecCCceEE
Confidence 678889999999999999878999999999999999999998 46789999999999876432211 111112277889
Q ss_pred EecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771 778 VLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817 (904)
Q Consensus 778 ~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~ 817 (904)
.|.+|+|++.|.|+|+|.|..|.|++|+.+.++|.+++|+
T Consensus 79 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~ 118 (121)
T 2dlh_A 79 TIGNLVPQKTYSVKVLAFTSIGDGPLSSDIQVITQTGSGP 118 (121)
T ss_dssp CCBSCCSSCEEEEEEEEEESSCBCCCCCCEEEECCCCCSC
T ss_pred EecCCCCCCEEEEEEEEEeCCccCCCCCCEEEECCCCCCC
Confidence 9999999999999999999999999999999999988875
No 98
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.55 E-value=8.7e-11 Score=134.88 Aligned_cols=192 Identities=9% Similarity=0.064 Sum_probs=115.1
Q ss_pred CCCCceEEecCCCeEEEEEEccCCCC---eEEEeeCCccc----c-C--------CCCceeec------ceEEEEeee--
Q psy8771 110 PPPALLEVMLDSPLNLSCVAVGSPMP---FVKWRKGQNIE----L-T--------PDDKLPVG------RNVLTLDRV-- 165 (904)
Q Consensus 110 ~~~~~~~~~~g~~~~l~C~~~g~p~p---~i~W~k~~~~~----~-~--------~~~~~~~~------~~~l~i~~l-- 165 (904)
.|.+ +.+.+|+.++|.|.+.|.|.+ .|.|+|++... + . ...|+.+. ...|.|.++
T Consensus 6 ~P~~-v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~ 84 (585)
T 2ocw_A 6 GPEE-VNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQ 84 (585)
T ss_pred Ccce-eEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCc
Confidence 4455 899999999999999999765 79999983311 1 0 12344432 236999998
Q ss_pred cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC----
Q psy8771 166 TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN---- 241 (904)
Q Consensus 166 ~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~---- 241 (904)
+|+|.|+|.|.|..|..+..+.|.|.. .|.+ ...|..+.+... ..++|.+...+.+.. ..+.|...+..
T Consensus 85 ~D~G~Y~C~~~n~~~~~~~~~~l~V~~--~p~~--~~~~~~~~v~~G--~~v~l~C~~~~~~~~-~~v~W~k~~~~~~~~ 157 (585)
T 2ocw_A 85 DDSGRYKCGLGINSRGLSFDVSLEVSQ--GPGL--LNDTKVYTVDLG--RTVTINCPFKTENAQ-KRKSLYKQIGLYPVL 157 (585)
T ss_pred ccCEEEEEEcccCCCCceEEEEEEEec--Cccc--cCCCccEEEEcC--CCEEEEEEecCCCCC-ccEEEEECCCCCceE
Confidence 699999999999998888888888872 1211 223444444333 345555554422111 12333332211
Q ss_pred -------------CCeEEeecc---eeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecc
Q psy8771 242 -------------TPYSEISGI---ITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRP 305 (904)
Q Consensus 242 -------------~~~~~~~~~---~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~ 305 (904)
......... ....|.|.+++..+.+.|+|.|.|..|.......+.+. . .+|..+.+.
T Consensus 158 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~--~----~~p~~~~~~- 230 (585)
T 2ocw_A 158 VIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVL--K----PEPELVYED- 230 (585)
T ss_pred EecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEc--c----CCCceeEEc-
Confidence 111111111 12379999999999999999999988864333333332 1 123333332
Q ss_pred cCCCeeEEEecC
Q psy8771 306 LSSSTMVIQWDE 317 (904)
Q Consensus 306 ~~~~~v~l~W~~ 317 (904)
....+.|.+..
T Consensus 231 -~G~~v~l~C~~ 241 (585)
T 2ocw_A 231 -LRGSVTFHCAL 241 (585)
T ss_pred -CCCcEEEEEEc
Confidence 34556677663
No 99
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=99.55 E-value=5.2e-14 Score=138.89 Aligned_cols=187 Identities=17% Similarity=0.223 Sum_probs=127.5
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCc-eeeEEEEEEeCCccc---cceEE------ecccceEEEeCCCCCcEEE
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGEN-IISYELYWNDTYAKA---KHHRR------IGLVETYSLTGLYPNTLYY 689 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~-~~~y~v~~~~~~~~~---~~~~~------~~~~~~~~l~~L~p~t~Y~ 689 (904)
+|..|+++........+++++|.+....+.. ...|.+.|+...... ..... ......+...+|.+++.|.
T Consensus 29 pP~~P~~l~C~~~~~~~~~c~W~p~~~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~~~~Y~ 108 (236)
T 1axi_B 29 SSGEPKFTKCRSPERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPYC 108 (236)
T ss_dssp ---CCCEEEEEBSSSSCEEEEECCC--------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSSEEE
T ss_pred CCCCCcCCeEEeCCCCEEEEEecCCCCCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCcccceEE
Confidence 5678899988778899999999975543332 258999987654321 11111 1122356667899999999
Q ss_pred EEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcE--EEecCC----CEEEEEecCCCCC-CCCc-cEEEEEEEEEEccC
Q psy8771 690 IWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVS--CEPLSS----TSIRISWEPPPVE-RSNG-HIVYYKLQFVETGR 761 (904)
Q Consensus 690 v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~--~~~~~~----~~v~l~W~~~~~~-~~~g-~~~~Y~v~~~~~~~ 761 (904)
|+|.| | .+ .+....+.....+.+.||.++. +...+. ..+.|+|++|... ..+| .+..|+|+|+..+.
T Consensus 109 ~~V~a-N-~~---~s~~~~~~~~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~~~~~g~~~l~Yevry~~~~~ 183 (236)
T 1axi_B 109 IKLTS-N-GG---TVDEKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNADIQKGWMVLEYELQYKEVNE 183 (236)
T ss_dssp EEEEE-T-TE---EEEEEEEEGGGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTSCTTTTSCCEEEEEEEEETTC
T ss_pred EEEEE-C-Cc---cCCCeEeecccccccCCCcccEEEEEecccCCCCceEEEEECCCCCccccCCceeeEEEEEEEECCC
Confidence 99999 8 22 2334555555555556889995 444332 3599999999532 3356 68999999999865
Q ss_pred CCCccEEEEecCcceEEecCCCCCceEEEEEEEeeCCC--CCCCCCcEEeecCC
Q psy8771 762 SDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIG--DGPSSYPITIRTHE 813 (904)
Q Consensus 762 ~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g--~g~~s~~~~~~t~~ 813 (904)
..+ ........+.+.|.+|+||+.|.|+|||.+..| .|++|.++.++|+.
T Consensus 184 ~~w--~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~WS~~~~~~~p~ 235 (236)
T 1axi_B 184 TKW--KMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGEFSEVLYVTLPQ 235 (236)
T ss_dssp SSC--EECCCBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCCCCCCEEECCCC
T ss_pred Cce--EEEeccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCCCCCCEEEECCC
Confidence 433 222222668999999999999999999999988 89999999998854
No 100
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.55 E-value=1e-14 Score=130.27 Aligned_cols=115 Identities=34% Similarity=0.510 Sum_probs=98.1
Q ss_pred CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceE
Q psy8771 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSF 777 (904)
Q Consensus 699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~ 777 (904)
|.|.+|..+.++|.+.+|..+|.++++...+.+++.|+|++|..+..+|.+.+|.|+|+..+...+ .....+. ..+.+
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~ 79 (132)
T 1x5h_A 1 GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASRKSD-VTETLVSGTQLSQ 79 (132)
T ss_dssp CCCCCCCCCCCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTEEEE-EECCBCCTTCCEE
T ss_pred CcCCCCCCEEEeCCCCCCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCCCCc-cEEEEeCCCccEE
Confidence 678889999999999999988999999999999999999999654478999999999998653221 1111133 78899
Q ss_pred EecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771 778 VLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814 (904)
Q Consensus 778 ~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~ 814 (904)
+|.+|++++.|.|+|+|.|..|.|++|..+.++|...
T Consensus 80 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~ 116 (132)
T 1x5h_A 80 LIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFES 116 (132)
T ss_dssp EEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSS
T ss_pred EeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcc
Confidence 9999999999999999999999999999999999874
No 101
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=6.3e-14 Score=123.09 Aligned_cols=115 Identities=26% Similarity=0.355 Sum_probs=96.7
Q ss_pred CCCCCCCCceeeecCCCCCCCCCCeEEE-ecCCceEEEEecCC--CCCCCceeeEEEEEEeCCCCCCcceEEEeecCceE
Q psy8771 464 GEGATTPPIPVRTKQYEPGTAPRDVQVR-PLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQL 540 (904)
Q Consensus 464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~-~~~~~~~~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~ 540 (904)
|.|.+|..+.+.|.+..|..+|.++++. ..+.++|.|+|++| ...+|.+.+|+|+|+.........|........+.
T Consensus 1 G~g~~S~~v~~~T~~~~P~~~P~~~~~~~~~s~~sv~l~W~pp~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~ 80 (124)
T 2dbj_A 1 GSSGSSGWILASTTEGAPSVAPLNVTVFLNESSDNVDIRWMKPPTKQQDGELVGYRISHVWQSAGISKELLEEVGQNGSR 80 (124)
T ss_dssp CCSCCCCCCCCCCSSCCCCSCCEEEEEEECSSSSEEEEEEECCSCCSTTCCEEEEEEEEEEEETTEEEEEEEEEESTTSC
T ss_pred CcCCCCCCEEEEccCCCCCCCCcceEEEecCCCCEEEEEEcCCCcccCCCeEeEEEEEEEECCCCCccceEEEeCCCcce
Confidence 5677888899999998898899999998 58889999999998 66788999999999754322224454444567788
Q ss_pred EEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCC
Q psy8771 541 TTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQG 578 (904)
Q Consensus 541 ~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~ 578 (904)
+.|.+|.+++.|.|+|+|+|..|.|++|..+.+.|...
T Consensus 81 ~~l~~L~p~t~Y~~~V~A~n~~G~Gp~S~~~~~~T~~~ 118 (124)
T 2dbj_A 81 ARISVQVHNATCTVRIAAVTRGGVGPFSDPVKIFIPAH 118 (124)
T ss_dssp EEEECCCSSSEEEECEEEEESSCBCCCCCCEEEECCCS
T ss_pred EEecCCCCCCEEEEEEEEECCCccCCCCCCEEEEcCCC
Confidence 99999999999999999999999999999999998654
No 102
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.54 E-value=2.2e-14 Score=124.55 Aligned_cols=115 Identities=38% Similarity=0.587 Sum_probs=98.9
Q ss_pred CCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEecc
Q psy8771 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWS 642 (904)
Q Consensus 563 g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~ 642 (904)
|.|+.|..+.+.|....|.+|.++++...+.+++.|+|.++..
T Consensus 1 G~g~~S~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~------------------------------------- 43 (115)
T 1x5z_A 1 GSSGSSGDIQVITQTGVPGQPLNFKAEPESETSILLSWTPPRS------------------------------------- 43 (115)
T ss_dssp CCCCCCCCCCCCCCSCCCCCCEEEEEECSSSSEEEEEEECCSC-------------------------------------
T ss_pred CCCCCCCCEEEECCCCCCCCCccCEeeeCCCCEEEEEEcCCCC-------------------------------------
Confidence 5678888899999988999999999999999999999999852
Q ss_pred CCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCC
Q psy8771 643 KPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720 (904)
Q Consensus 643 ~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P 720 (904)
+.+.+|.|+|+..+...+..........+.|.+|+|++.|.|+|+|+|..|.|.+|..+.++|...+|..||
T Consensus 44 ------~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~pp 115 (115)
T 1x5z_A 44 ------DTIANYELVYKDGEHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSSGPSSG 115 (115)
T ss_dssp ------CCCCEEEECBEESSSCCCBCCEECSSSEEEEECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCCCCCCC
T ss_pred ------CCccEEEEEEEeCCCCCceEEecCCCcEEEECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCCCCCCC
Confidence 368899999988766555444445568999999999999999999999999999999999999998887654
No 103
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.54 E-value=9.9e-14 Score=120.86 Aligned_cols=117 Identities=16% Similarity=0.282 Sum_probs=99.7
Q ss_pred CCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEE
Q psy8771 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTI 543 (904)
Q Consensus 464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 543 (904)
|.|..|..+.+.|....| .+|.++.+...+.+++.|+|.+|.+.++.+.+|.|+|+..... ..|........+.+.+
T Consensus 1 G~s~~S~~~~~~t~~~~P-~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~v 77 (118)
T 1x3d_A 1 GSSGSSGAEIFTTLSCEP-DIPNPPRIANRTKNSLTLQWKAPSDNGSKIQNFVLEWDEGKGN--GEFCQCYMGSQKQFKI 77 (118)
T ss_dssp CCCCCCCCCCCCCCCSCC-CCCCCCEEEEEETTEEEEECCCCCCCSSCEEEEEEEECTTTSS--SCCEEEEEESCSEEEE
T ss_pred CCCCCCcCEEEEcCCCCC-cCCCCcEEeccCCCEEEEEECCCCCCCCcceEEEEEEecCCCC--CCeEEeeccCCcEEEe
Confidence 567778888888877655 7889999999999999999999987777999999999876532 4676666666688999
Q ss_pred cCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCC
Q psy8771 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583 (904)
Q Consensus 544 ~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p 583 (904)
.+|.|++.|.|+|+|+|..|.|.+|..+.+.|....|.+|
T Consensus 78 ~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~P~~P 117 (118)
T 1x3d_A 78 TKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCSGPSS 117 (118)
T ss_dssp ESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCCCCCC
T ss_pred CCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCCCccC
Confidence 9999999999999999999999999999999988777665
No 104
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.53 E-value=3.1e-14 Score=125.74 Aligned_cols=114 Identities=25% Similarity=0.416 Sum_probs=96.3
Q ss_pred CCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCC------ccEEEEec-Ccce
Q psy8771 704 TPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDS------EASIVTLK-NQTS 776 (904)
Q Consensus 704 s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~------~~~~~~~~-~~~~ 776 (904)
|..+.++|.+..|..+|.++++...+.+++.|+|++|.....||.+.+|.|+|+..+.... ......+. ..+.
T Consensus 2 S~~v~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (125)
T 1uen_A 2 SSGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTH 81 (125)
T ss_dssp CCCCCCCSCCCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSE
T ss_pred CccEEEECCCCCCCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCccE
Confidence 4567889999999888999999999999999999999544568899999999998764332 11233344 7899
Q ss_pred EEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771 777 FVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817 (904)
Q Consensus 777 ~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~ 817 (904)
+.|.+|+|++.|.|+|+|+|..|.|++|.++.++|.++.|.
T Consensus 82 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~ 122 (125)
T 1uen_A 82 GMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGP 122 (125)
T ss_dssp EEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCCSS
T ss_pred EEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCCCCC
Confidence 99999999999999999999999999999999999988874
No 105
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.52 E-value=8.5e-14 Score=121.28 Aligned_cols=115 Identities=19% Similarity=0.304 Sum_probs=96.0
Q ss_pred CCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEecc
Q psy8771 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWS 642 (904)
Q Consensus 563 g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~ 642 (904)
|.|.+|..+.+.|....|.+|.++++...+.+++.|+|.++.+
T Consensus 1 G~s~~S~~~~~~t~~~~P~~P~~~~~~~~~~~sv~l~W~~p~~------------------------------------- 43 (118)
T 1x3d_A 1 GSSGSSGAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWKAPSD------------------------------------- 43 (118)
T ss_dssp CCCCCCCCCCCCCCCSCCCCCCCCEEEEEETTEEEEECCCCCC-------------------------------------
T ss_pred CCCCCCcCEEEEcCCCCCcCCCCcEEeccCCCEEEEEECCCCC-------------------------------------
Confidence 5677888888999888999999999999999999999999865
Q ss_pred CCCCCCCceeeEEEEEEeCCc-cccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCC
Q psy8771 643 KPTHSGENIISYELYWNDTYA-KAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGA 718 (904)
Q Consensus 643 ~~~~~~~~~~~y~v~~~~~~~-~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~ 718 (904)
+++.+.+|.|+|+.... ..+..........+++.+|+|++.|.|+|+|+|..|.|.+|..+.+.|...+|..
T Consensus 44 ----~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~P~~ 116 (118)
T 1x3d_A 44 ----NGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYGTSGFSEEVLYYTSGCSGPS 116 (118)
T ss_dssp ----CSSCEEEEEEEECTTTSSSCCEEEEEESCSEEEEESCCTTCEEEEECCEEESSCBCCCCCCEEEECSCCCCCC
T ss_pred ----CCCcceEEEEEEecCCCCCCeEEeeccCCcEEEeCCCCCCCEEEEEEEEEECCCCCCCccCEEEEcCCCCCcc
Confidence 45667888888876654 3344444455689999999999999999999999999999999999998877763
No 106
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.52 E-value=6.7e-13 Score=148.41 Aligned_cols=180 Identities=9% Similarity=-0.003 Sum_probs=118.7
Q ss_pred CcceeeeccceEEE-----EecCCCCCcceeeEeeCCCCCCCCcEEEec-cCCceEEEEeCCCCCC--C-----------
Q psy8771 2 DTRCYVESPEEVFI-----ILCPLPPLIPGYILVTEPGTAPRDVQVRPL-SSSTMVIQWDEPETPN--G----------- 62 (904)
Q Consensus 2 ~~~~~~~~~~~~~~-----~~~~~~p~~~~~~~~~~p~~~p~~l~~~~~-~~~s~~v~W~~~~~~~--g----------- 62 (904)
.|+|.|.+...... +-...+|..+-. ......+....|.|... +.+.+.|+|.+....- +
T Consensus 205 ~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~p~-~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~~~~~~~ 283 (527)
T 3qs9_E 205 DIRCCARNELGRECTRLFTIDLNQTPQTTLP-QLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTN 283 (527)
T ss_dssp CEEEEEECSSCEEEEECEEEESSSCCCCSCC-EEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEEEEEETT
T ss_pred EEEEEEEeCCCcccceEEEEEEeccCccCCC-ceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeeeeeeccC
Confidence 58999997755432 222233333221 22222347778888886 8899999998875431 1
Q ss_pred -------ceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCC-CceEEecCCCeEEEEEEccCCC
Q psy8771 63 -------QITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPP-ALLEVMLDSPLNLSCVAVGSPM 134 (904)
Q Consensus 63 -------~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~-~~~~~~~g~~~~l~C~~~g~p~ 134 (904)
.+........|...+.|...+. ....+.+.| ..+|.+...+. ..+.+.+|+.+.|.|.+.|.|.
T Consensus 284 ~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V-----~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~ 355 (527)
T 3qs9_E 284 RTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTI-----VEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQ 355 (527)
T ss_dssp TEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEE-----C--CEEECCCSCCEECCCTTCCCCEEEEEEEESC
T ss_pred cceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEE-----EccCccccccCcccEEEcCCCeEEEEEEEEecCC
Confidence 0222223333444444444433 344445554 34566655442 2377889999999999999999
Q ss_pred CeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771 135 PFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 135 p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
|.|+|+|+ +..+....+...+++.|.|.++ +|+|.|+|.|.|..|.....+.|.|.
T Consensus 356 p~i~W~k~-g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~ 413 (527)
T 3qs9_E 356 IRCTWTFS-RKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR 413 (527)
T ss_dssp CEEEEEET-TEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--
T ss_pred CEEEEEEC-CEECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEe
Confidence 99999999 7777665555557789999999 69999999999999999888888887
No 107
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.51 E-value=6.3e-13 Score=150.35 Aligned_cols=328 Identities=12% Similarity=0.072 Sum_probs=176.1
Q ss_pred CCCCcEEEeccCCceEEEEeCC-CC-----------CCCceecccccccccc-eEEEEeeeccCCeee-eeeeeccCCCC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEP-ET-----------PNGQITHPPTRAARSH-ARLAAQSVLRRGRLA-HAVRQVADPVR 101 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~-~~-----------~~g~i~~~~~~~~~~~-~~~~~~~~~~~g~~~-~~~~~v~~~~~ 101 (904)
....|.|...+.+.+.|.|.+. .. .++.+........+.. ...|...+......+ .+.+.+.. ..
T Consensus 130 ~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~-~~ 208 (524)
T 2ec8_A 130 NDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRP-AF 208 (524)
T ss_dssp SCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEEC-CC
T ss_pred CeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEe-CC
Confidence 4555666665655689999652 11 1233333334445555 555555443222222 34444431 12
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCe-EEEeeCCccc--cCCCCce-------eecceEEEEeee--cCCe
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIE--LTPDDKL-------PVGRNVLTLDRV--TESE 169 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~k~~~~~--~~~~~~~-------~~~~~~l~i~~l--~d~g 169 (904)
..+|.|...+.+ ..+.+|+.+.|.|.+.|.|.|. |.|+|+ +.. +....+. ....+.|.|.++ +|+|
T Consensus 209 ~~~p~i~~~~~~-~~v~~G~~v~L~C~~~g~p~p~~i~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G 286 (524)
T 2ec8_A 209 KAVPVVSVSKAS-YLLREGEEFTVTCTIKDVSSSVYSTWKRE-NSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSG 286 (524)
T ss_dssp CSCCEEECSCSE-EEEETTSCEEEEEEEEESSTTCEEEEEET-TCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCE
T ss_pred CCCCcEEecCCc-ceEEcCCcEEEEEEEecCCCcEEEEEEeC-CCCCccccccccccccCCccceEEEEEECCCCHHHCE
Confidence 578999998888 8999999999999999999987 999999 544 2222221 224678999999 6999
Q ss_pred EEEEEEEecCcceEEEEEEEEEeecCCCCC-CCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCC-----C
Q psy8771 170 NYTCIAASVLGVIETSTIVKVQCKYAPLLT-LPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANT-----P 243 (904)
Q Consensus 170 ~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~-~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~-----~ 243 (904)
.|+|.|.|..|.....+.|.|.. .|... .|..+....+ .....++|.+...+.+... .+.|...+... .
T Consensus 287 ~Y~C~a~n~~g~~~~~~~l~V~~--~p~~~~~~~~~~~~~v--~~G~~v~l~C~~~g~P~p~-~v~W~k~g~~~~~~~~~ 361 (524)
T 2ec8_A 287 VFMCYANNTFGSANVTTTLEVVD--KGFINIFPMINTTVFV--NDGENVDLIVEYEAFPKPE-HQQWIYMNRTFTDKWED 361 (524)
T ss_dssp EEEEEEECSSCEEEEEEEEEEES--SCEEEEEESSCSEEEE--CTTCCEEEEEEEEEESCCC-EEEEESSSCBCSSSBCC
T ss_pred EEEEEEEecCCceEEEEEEEEec--cCceEeecCCCceEEE--cCCCcEEEEEEEeecCCCc-EEEEEECCeeccCCccc
Confidence 99999999999998888888871 11110 0111122322 2334456666543222221 24454432211 1
Q ss_pred eEEeecc----eeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCC---CCCCCCCceEecccCCCeeEEEec
Q psy8771 244 YSEISGI----ITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGET---EPGTAPRDVQVRPLSSSTMVIQWD 316 (904)
Q Consensus 244 ~~~~~~~----~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~---~p~~~p~~l~~~~~~~~~v~l~W~ 316 (904)
+...... ....+.|.++...+.+.|+|.|.|..|....+..+.+...+. .+......|.+...+.....+.|.
T Consensus 362 ~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~i~~~~~~~~g~l~C~~~g~P~p~i~W~ 441 (524)
T 2ec8_A 362 YPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNTKPEILTYDRLVNGMLQCVAAGFPEPTIDWY 441 (524)
T ss_dssp EESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEEECCSSSCEEEEEEEESCCEEECC
T ss_pred eeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEecCCeEeecccCcCcEEEEEEEeecCCEEEEE
Confidence 1111111 346899999999999999999999998743222222211110 000011155565555555678887
Q ss_pred CCCCCC-----------ceeeEEEEEeecee-EEEEEcCCCCCcEEEEEEEEEcCCCCCCCCCCcce
Q psy8771 317 EPETPN-----------GQITAKHHRRIGLV-ETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPV 371 (904)
Q Consensus 317 ~p~~~~-----------~~~~~~~~~~~~~~-~~~~~~~L~~~~~Y~v~v~a~~~~g~~~~s~~~~~ 371 (904)
...... .....+.....+.. ....+........-.+++.|.|..|....+..+.+
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~l~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~V 508 (524)
T 2ec8_A 442 FCPGTEQRCSASVLPVDVQTLNSSGPPFGKLVVQSSIDSSAFKHNGTVECKAYNDVGKTSAYFNFAF 508 (524)
T ss_dssp CC----------CCCCCCCCCCC-CCSSSCEEEEEEECCCSCCC-----CEEECSSCEEECCCCCCC
T ss_pred ECCCcccccccccCCCCceeeeeccCCCCcceEEEEEEEEEccCCEEEEEEEEcCCCceEEEEEEEE
Confidence 642211 00000000001111 11123333335566777888998887555443333
No 108
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.50 E-value=7e-14 Score=122.86 Aligned_cols=114 Identities=33% Similarity=0.560 Sum_probs=95.5
Q ss_pred CCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCc-cEEEE--ec-CcceEEe
Q psy8771 704 TPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSE-ASIVT--LK-NQTSFVL 779 (904)
Q Consensus 704 s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~-~~~~~--~~-~~~~~~i 779 (904)
|..+.++|.+..|..+|.++++...+.+++.|+|++|..+..+|.+.+|.|+|+..+...+. ..... .. ..+.+.|
T Consensus 3 S~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 82 (122)
T 1va9_A 3 SGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYTL 82 (122)
T ss_dssp CCCCSSCSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEEE
T ss_pred CCCEEEECCCCCCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEEe
Confidence 55678889999998789999999999999999999996544789999999999987643221 11111 12 5689999
Q ss_pred cCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771 780 DELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817 (904)
Q Consensus 780 ~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~ 817 (904)
.+|+|++.|.|+|+|.|..|.|++|..+.++|..++|+
T Consensus 83 ~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~ 120 (122)
T 1va9_A 83 DNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESGPS 120 (122)
T ss_dssp ESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSSCCC
T ss_pred CCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCCCCC
Confidence 99999999999999999999999999999999998885
No 109
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.50 E-value=9.5e-14 Score=123.92 Aligned_cols=121 Identities=30% Similarity=0.468 Sum_probs=102.2
Q ss_pred CCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCC--CCCceeeEEEEEEeCCCCCCcceEEE--eecCce
Q psy8771 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPET--PNGQITGYKVYYTQDQSLPMSAWETQ--VVDNNQ 539 (904)
Q Consensus 464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~~~~--~~~~~~ 539 (904)
|.|.+|..+.++|....|..+|.++++...+.+++.|+|++|.. .++.+.+|.|+|+.... ..|... .....+
T Consensus 1 G~g~~S~~~~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~ 77 (132)
T 1x5h_A 1 GSSGSSGDVAVRTLSDVPSAAPQNLSLEVRNSKSIMIHWQPPAPATQNGQITGYKIRYRKASR---KSDVTETLVSGTQL 77 (132)
T ss_dssp CCCCCCCCCCCCCCCSSCCCCCEEEEEECCSSSEEEEEEECCCTTTCCSCEEEEBCEEEETTE---EEEEECCBCCTTCC
T ss_pred CcCCCCCCEEEeCCCCCCCCCCeeeEEEeCCCCEEEEEEeCCCCcCCCceEeEEEEEEEECCC---CCccEEEEeCCCcc
Confidence 56778888999999888877899999999999999999999876 67899999999998653 222222 335678
Q ss_pred EEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCC------CCCCCCCce
Q psy8771 540 LTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQG------VPSQPRDLR 587 (904)
Q Consensus 540 ~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~------~p~~p~~~~ 587 (904)
++.|.+|.|++.|.|+|+|+|..|.|.+|..+.++|... .|.+|..|.
T Consensus 78 ~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~~~~~~~P~~P~~ls 131 (132)
T 1x5h_A 78 SQLIEGLDRGTEYNFRVAALTINGTGPATDWLSAETFESDLDETRVPEVSGPSS 131 (132)
T ss_dssp EEEEECCCSSCEEEEECEEEETTEEEEECCCEEEECCSSCCCCCCCCCCCCCCC
T ss_pred EEEeCCCCCCCEEEEEEEEEcCCccCCCCcCEEeEcCcccCCcccCCCCCCCCC
Confidence 899999999999999999999999999999999999875 788887764
No 110
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.50 E-value=7.6e-13 Score=147.95 Aligned_cols=258 Identities=11% Similarity=0.069 Sum_probs=144.4
Q ss_pred CcceeeeccceEEEEecC--CCC---CcceeeEeeCCCCCCCCcEEEeccCCceEEEEeCCCCC--------CCceec--
Q psy8771 2 DTRCYVESPEEVFIILCP--LPP---LIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETP--------NGQITH-- 66 (904)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~--~~p---~~~~~~~~~~p~~~p~~l~~~~~~~~s~~v~W~~~~~~--------~g~i~~-- 66 (904)
.|.|.+.++...+.+... ..| ..+..-...... ....|.|...+.+.+.|.|...... .+.+..
T Consensus 117 ~Y~C~~~n~~~~~~~~~~v~v~~~~~~~~~~p~~~~~~-~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~~~~~~~~~~~ 195 (527)
T 3qs9_E 117 EYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKME-NQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEE 195 (527)
T ss_dssp EEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECS-SSSCEEEEEEESSCCEEEEEEC-------------CEEECC
T ss_pred eEEEEEEeccccEEEEEEEEECCceeeccCCCcEEecC-CceEEEEEEceecCCeEEEEECCCCCccccccCCcEEEEee
Confidence 589999998776544322 111 111111111112 4557899999999999999764322 111221
Q ss_pred ccccccccceEEEEeeeccCCeeee-eeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEc-cCCCCeEEEeeCCc
Q psy8771 67 PPTRAARSHARLAAQSVLRRGRLAH-AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQN 144 (904)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~ 144 (904)
..+...+...+.|...+..+..... +.+.+ ..+|.+ +|.+ +.+.+|+.+.|.|.+. |.|.|.|+|+|+ +
T Consensus 196 ~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V-----~~~p~~--~p~~-~~v~~G~~v~L~C~~~~g~p~p~i~W~k~-g 266 (527)
T 3qs9_E 196 KVLHELFGTDIRCCARNELGRECTRLFTIDL-----NQTPQT--TLPQ-LFLKVGEPLWIRCKAVHVNHGFGLTWELE-N 266 (527)
T ss_dssp SEECCCCSSCEEEEEECSSCEEEEECEEEES-----SSCCCC--SCCE-EEECTTSCEEEEEEEEESSSCCCEEEECS-S
T ss_pred eeccccCCEEEEEEEEeCCCcccceEEEEEE-----eccCcc--CCCc-eEEeCCCeEEEEEEEccCCCCeEEEEEEC-C
Confidence 1223334444555554433332222 34444 344544 4445 8999999999999997 999999999999 6
Q ss_pred cccCCCCce----------eecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEee
Q psy8771 145 IELTPDDKL----------PVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEV 212 (904)
Q Consensus 145 ~~~~~~~~~----------~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~ 212 (904)
..+.....+ ....+.|.|.++ +|+|.|+|.|.|. .+..+.|.|... +..........+.+.
T Consensus 267 ~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~--p~i~~~~~~~~~~v~-- 339 (527)
T 3qs9_E 267 KALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEK--GFINATNSSEDYEID-- 339 (527)
T ss_dssp SCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC----CEEECCCSCCEECCC--
T ss_pred EECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEcc--CccccccCcccEEEc--
Confidence 655443222 223456999998 6999999999997 567777777621 111111111112222
Q ss_pred cCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE--eecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 213 TATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE--ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 213 ~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~--~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
....+.|.+...+.+.. .|.|...+. .... ........+.|.++...+.+.|+|.|.|..|...
T Consensus 340 ~G~~v~L~C~~~g~P~p--~i~W~k~g~--~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~ 405 (527)
T 3qs9_E 340 QYEEFCFSVRFKAYPQI--RCTWTFSRK--SFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFT 405 (527)
T ss_dssp TTCCCCEEEEEEEESCC--EEEEEETTE--EEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEE
T ss_pred CCCeEEEEEEEEecCCC--EEEEEECCE--ECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcEE
Confidence 22333344433222221 134443311 0000 0011235789999999999999999999988643
No 111
>1axi_B HGHBP, growth hormone receptor; complex (hormone-receptor), complex (hormone-receptor) compl; 2.10A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1a22_B 1kf9_B 1hwg_B 1hwh_B 3hhr_B 2aew_A
Probab=99.50 E-value=1.7e-13 Score=135.26 Aligned_cols=191 Identities=14% Similarity=0.223 Sum_probs=125.4
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCc-eeeEEEEEEeCCCCC-CcceEEEee-----cCceEEEEcCCCCCCeE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITGYKVYYTQDQSLP-MSAWETQVV-----DNNQLTTISDLTPHTIY 552 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~-i~~Y~v~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~L~p~t~Y 552 (904)
.||..|.++.....+.+++.++|+++...+.. ...|.|.|....... ...+..-.. .....+...+|.+.+.|
T Consensus 28 ~pP~~P~~l~C~~~~~~~~~c~W~p~~~~~~~~~~~y~l~Y~~~~~~~~~~~~~~C~~~~~~~~~~C~~~~~~l~~~~~Y 107 (236)
T 1axi_B 28 NSSGEPKFTKCRSPERETFSCHWTDEVHHGTKNEGPIQLFYTRRNTQEWTQEWKECPDYVSAGENSCYFNSSFTSIAIPY 107 (236)
T ss_dssp ----CCCEEEEEBSSSSCEEEEECCC--------CSCEEEEEECC------CCEECSCSSTTCTTEEEECGGGCCSSSEE
T ss_pred CCCCCCcCCeEEeCCCCEEEEEecCCCCCCCCCCceEEEEEEeCCCCcCCCceeeCCCCCCCCCEEEEECCcCCcccceE
Confidence 46788999988888889999999975543222 258999887654211 011222111 12234556789999999
Q ss_pred EEEEEEEeCCCCCCCCCcEEEec-CCCCCCCCCCce--EEecCC----CeEEEEEeCCCCCCCCceEEEEEeccCCCCCc
Q psy8771 553 TIRVQAFTSVGPGPLSAPVLVKT-QQGVPSQPRDLR--AVDIQE----TAVTLAWSKPTHSGENIISYELYWNDTYAKPR 625 (904)
Q Consensus 553 ~~~V~a~~~~g~~~~S~~~~~~t-~~~~p~~p~~~~--~~~~~~----~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~ 625 (904)
.|+|.| | .+ .+....+.. ....|.+|.++. +...+. ..+.|+|.+|...
T Consensus 108 ~~~V~a-N-~~---~s~~~~~~~~~~v~p~pP~~l~~~~~~~s~~~~~~~l~lsW~~P~~~------------------- 163 (236)
T 1axi_B 108 CIKLTS-N-GG---TVDEKCFSVDEIVQPDPPIALNWTLLNVSLTGIHADIQVRWEAPRNA------------------- 163 (236)
T ss_dssp EEEEEE-T-TE---EEEEEEEEGGGGBCCCCCEEEEEEECSCCSSCSEEEEEEEEECCTTS-------------------
T ss_pred EEEEEE-C-Cc---cCCCeEeecccccccCCCcccEEEEEecccCCCCceEEEEECCCCCc-------------------
Confidence 999999 7 22 344444443 334577888885 444333 2499999988531
Q ss_pred ceEEEeeccceEEEeccCCCCCCC-ceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC--CCC
Q psy8771 626 DLRAVDIQETAVTLAWSKPTHSGE-NIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG--EGA 702 (904)
Q Consensus 626 ~l~~~~~~~~~~~l~w~~~~~~~~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G--~~~ 702 (904)
...++ .+..|.|+|+..+...+........+++.|.+|+|++.|.|+|+|....| .|+
T Consensus 164 -------------------~~~~g~~~l~Yevry~~~~~~~w~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~gg~ws~ 224 (236)
T 1axi_B 164 -------------------DIQKGWMVLEYELQYKEVNETKWKMMDPILTTSVPVYSLKVDKEYEVRVRSKQRNSGNYGE 224 (236)
T ss_dssp -------------------CTTTTSCCEEEEEEEEETTCSSCEECCCBSSSEEEEEEEETTSCEEEEEEEEETTSSCCCC
T ss_pred -------------------cccCCceeeEEEEEEEECCCCceEEEeccCCCEEEEeccCCCCEEEEEEEEEECCCCCcCC
Confidence 00133 57899999999876555444444568999999999999999999999888 789
Q ss_pred CCCCeeEEecC
Q psy8771 703 TTPPIPVRTKQ 713 (904)
Q Consensus 703 ~s~~~~~~t~~ 713 (904)
+|..+.+.|..
T Consensus 225 WS~~~~~~~p~ 235 (236)
T 1axi_B 225 FSEVLYVTLPQ 235 (236)
T ss_dssp CCCCEEECCCC
T ss_pred CCCCEEEECCC
Confidence 99888887753
No 112
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.50 E-value=4e-13 Score=145.62 Aligned_cols=263 Identities=13% Similarity=0.211 Sum_probs=153.5
Q ss_pred CcceeeeccceEEE-----EecCCCCCc---ceeeEeeCCCCCCCCcEEEeccCC---ceEEEEeCCCCC----------
Q psy8771 2 DTRCYVESPEEVFI-----ILCPLPPLI---PGYILVTEPGTAPRDVQVRPLSSS---TMVIQWDEPETP---------- 60 (904)
Q Consensus 2 ~~~~~~~~~~~~~~-----~~~~~~p~~---~~~~~~~~p~~~p~~l~~~~~~~~---s~~v~W~~~~~~---------- 60 (904)
.|+|.+.+...... +....+|.. +....+. .+....|.|...+.. .+.|.|.+....
T Consensus 79 ~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~~~~v~--~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~ 156 (388)
T 2v5m_A 79 VYACLARNQFGSIISRDVHVRAVVAQYYEADVNKEHVI--RGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDG 156 (388)
T ss_dssp EEEEEEEETTEEEECCCEEEEEECCCCCCCBCCCEEEE--TTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTT
T ss_pred eEEEEEEccCCeEEecceEEEEccccccccCccceeee--cCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCC
Confidence 48999998765421 111122221 1111111 123444444443332 389999875321
Q ss_pred ------CCceeccccccccc-ceEEEEeeeccCCeeee----eeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEE
Q psy8771 61 ------NGQITHPPTRAARS-HARLAAQSVLRRGRLAH----AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA 129 (904)
Q Consensus 61 ------~g~i~~~~~~~~~~-~~~~~~~~~~~~g~~~~----~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~ 129 (904)
+|.++.......+. ....|...+...|.... ..+.+..+....+|.+.........+.+|+.++|.|.+
T Consensus 157 ~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~ 236 (388)
T 2v5m_A 157 KYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLCPA 236 (388)
T ss_dssp TEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECCCC
T ss_pred cEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEEEC
Confidence 23444444445554 55556665544443221 23333332222233332222222678899999999999
Q ss_pred ccCCCCeEEEeeCCcc-----ccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCC
Q psy8771 130 VGSPMPFVKWRKGQNI-----ELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPV 202 (904)
Q Consensus 130 ~g~p~p~i~W~k~~~~-----~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~ 202 (904)
.|.|.|.|.|+|++.. .+....++...++.|.|.++ +|+|.|+|.|.|..|..+..+.|.|..... .. .
T Consensus 237 ~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~--~~--~ 312 (388)
T 2v5m_A 237 QGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLS--AK--I 312 (388)
T ss_dssp EEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEE--EE--E
T ss_pred CCCCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCc--cc--c
Confidence 9999999999997322 12234455566789999999 699999999999999988888888873211 00 1
Q ss_pred CCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 203 APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 203 ~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
.|....+. ....++|.+...+.+.. .+.|...+.. + ......|.|.++...+.+.|+|.|.|..|...
T Consensus 313 ~~~~~~v~--~g~~~~l~C~~~g~p~p--~i~W~~~g~~-----i-~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 380 (388)
T 2v5m_A 313 DPPTQTVD--FGRPAVFTCQYTGNPIK--TVSWMKDGKA-----I-GHSESVLRIESVKKEDKGMYQCFVRNDRESAE 380 (388)
T ss_dssp ESSEEEEC--TTSCEEEEEEEEEECCC--EEEEEETTEE-----C-SCCSSEEEESSCCGGGCEEEEEEEECSSCEEE
T ss_pred CCCcEEec--CCCCEEEEEEeccccCC--eEEEEECCEE-----C-ccCCCEEEEecCChhhCEEEEEEEEcCCCcEE
Confidence 22233332 23456666654322222 3555543211 1 12346899999999999999999999998643
No 113
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.50 E-value=1.8e-13 Score=118.40 Aligned_cols=97 Identities=19% Similarity=0.218 Sum_probs=84.5
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a 175 (904)
..||.|...|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.+. ...|.|.++ +|+|.|+|.|
T Consensus 5 ~~pp~i~~~~~~-~~v~~G~~v~l~C~~~g~p~p~i~W~k~-~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (114)
T 2cqv_A 5 SSGPQIIQFPED-QKVRAGESVELFGKVTGTQPITCTWMKF-RKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLV 82 (114)
T ss_dssp CCCCEESCCCCS-EEEETTCCEEEEEEEESSSSCEEEEEES-SSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEE
T ss_pred CCCCEEEeCCCC-eEEeCCCeEEEEEEEEcCCCCEEEEEEC-CEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEE
Confidence 468999998888 9999999999999999999999999999 7777766676654 578999999 6999999999
Q ss_pred EecCcceEEEEEEEEEeecCCCCCCCCCCcce
Q psy8771 176 ASVLGVIETSTIVKVQCKYAPLLTLPVAPLDV 207 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l 207 (904)
.|..|.....+.|.|. ..|.+|...
T Consensus 83 ~N~~g~~~~~~~l~V~-------~~p~~P~~p 107 (114)
T 2cqv_A 83 ENKLGSRQAQVNLTVV-------DKPDPPAGT 107 (114)
T ss_dssp ECSSCEEECCEEEEEE-------CSCSCCCCC
T ss_pred EECCCcEEEEEEEEEE-------CCCCCCCCC
Confidence 9999999999999998 666666543
No 114
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.49 E-value=8.5e-14 Score=116.41 Aligned_cols=87 Identities=18% Similarity=0.424 Sum_probs=75.5
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC--Cceee----cceEEEEeee--cCCeEEEEE
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD--DKLPV----GRNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~--~~~~~----~~~~l~i~~l--~d~g~Y~c~ 174 (904)
.||+|...|.+ +.+.+|+++.|.|.+.|.|.|.|+|+|+ +..+... .|+.+ +..+|.|.++ +|+|.|+|.
T Consensus 4 ~PP~i~~~p~~-~~v~~G~~~~l~C~~~g~P~p~v~W~k~-g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 81 (100)
T 3knb_A 4 IPPKIEALPSD-ISIDEGKVLTVACAFTGEPTPEVTWSCG-GRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLS 81 (100)
T ss_dssp EEEEECCCCSE-EEEETTSEEEEEEEEEEESCCEEEEEET-TEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEE
T ss_pred CCCEEEeCCCc-EEEeCCCeEEEEEEEEEecCCEEEEEEC-ceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEE
Confidence 57899998888 9999999999999999999999999999 7666543 34443 2357999999 699999999
Q ss_pred EEecCcceEEEEEEEEE
Q psy8771 175 AASVLGVIETSTIVKVQ 191 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~ 191 (904)
|.|..|..+..+.|.|+
T Consensus 82 a~N~~G~~~~~~~l~V~ 98 (100)
T 3knb_A 82 LGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEECCCEEEEEEEEEEE
Confidence 99999999999999987
No 115
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.49 E-value=3e-13 Score=114.78 Aligned_cols=100 Identities=23% Similarity=0.319 Sum_probs=85.4
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF 559 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~ 559 (904)
.+|.+|.++++...+.+++.|+|++|.+.++.+.+|.|+|+.... .|........+.+.+.+|.|++.|.|+|+|+
T Consensus 6 ~~P~~P~~~~~~~~s~~sv~l~W~~p~~~g~~i~~Y~v~~~~~~~----~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~ 81 (106)
T 1x4x_A 6 SGPDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGGVEG----SMQICYCGPGLSYEIKGLSPATTYYCRVQAL 81 (106)
T ss_dssp CSCCCCCCCCCEEEETTEEEEECCCCSCSSSCCCEEEEEEESSTT----SCCEEEEESCSEEEEESCCSSCEEEEEEEEE
T ss_pred CCcCCCCCCEEEEcCCCEEEEEEcCCCCCCCcceEEEEEEEcCCC----ceEEEEeCCcceEEEcCCCCCCEEEEEEEEE
Confidence 566889999999999999999999998754589999999987652 2334444667789999999999999999999
Q ss_pred eCCCCCCCCCcEEEecCCCCCCCC
Q psy8771 560 TSVGPGPLSAPVLVKTQQGVPSQP 583 (904)
Q Consensus 560 ~~~g~~~~S~~~~~~t~~~~p~~p 583 (904)
|..|.|++|..+.+.|....|.+|
T Consensus 82 n~~G~g~~S~~v~~~T~~~~P~~~ 105 (106)
T 1x4x_A 82 SVVGAGPFSEVVACVTPPSSGPSS 105 (106)
T ss_dssp CSSCCCCBCCCEEEECCCCCSCCC
T ss_pred cCCcCCCCcCCEEEECCCCCcCCC
Confidence 999999999999999988887765
No 116
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=99.49 E-value=2e-13 Score=114.37 Aligned_cols=98 Identities=19% Similarity=0.231 Sum_probs=79.0
Q ss_pred CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC-CccEEEEec-CcceEEecCCCCCceEEEEE
Q psy8771 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD-SEASIVTLK-NQTSFVLDELKKWTEYRIWV 792 (904)
Q Consensus 715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~-~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V 792 (904)
.|..+|.++.+...+.+++.|+|++|..+..||.+.+|.|.|+..+... .......+. ..+.+.|.+|+|++.|.|+|
T Consensus 3 ~P~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~v~V 82 (102)
T 3n1f_C 3 TPITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHMIGHLQPETSYDIKM 82 (102)
T ss_dssp -CCSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEETTCSEEEECSCCTTCEEEEEE
T ss_pred CCCCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEcCCceEEECCCCCCCCEEEEEE
Confidence 5777899999999999999999999965568999999999999876431 122334444 67789999999999999999
Q ss_pred EEeeCCCCCCCCCcEEeecC
Q psy8771 793 LAGTSIGDGPSSYPITIRTH 812 (904)
Q Consensus 793 ~a~~~~g~g~~s~~~~~~t~ 812 (904)
+|+|..|.|++|.++.++|.
T Consensus 83 ~A~n~~G~G~~S~~~~~~T~ 102 (102)
T 3n1f_C 83 QCFNEGGESEFSNVMICETK 102 (102)
T ss_dssp EEEETTEECCCCCCEEEECC
T ss_pred EEECCCcCCCCCCCEEeecC
Confidence 99999999999999999883
No 117
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.48 E-value=2.2e-13 Score=119.62 Aligned_cols=116 Identities=25% Similarity=0.500 Sum_probs=95.2
Q ss_pred CCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCC--CCCceeeEEEEEEeCCCCCCcceEEEe---ecCceEEE
Q psy8771 468 TTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPET--PNGQITGYKVYYTQDQSLPMSAWETQV---VDNNQLTT 542 (904)
Q Consensus 468 ~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~~ 542 (904)
+|....++|....|+.+|.++++...+.+++.|+|++|.. .+|.+.+|.|+|+..+......|.... ..+.+.+.
T Consensus 2 sS~~~~~~T~~~~P~~~P~~~~~~~~~~~sv~l~W~~p~~~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (122)
T 1va9_A 2 SSGSSGISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIRGYQIGYRENSPGSNGQYSIVEMKATGDSEVYT 81 (122)
T ss_dssp CCCCCSSCSSCCCCSSCCEEEEEEECSSSEEEEEEECCCSSTTCSCCCEEEEEEEESSTTSCCSCBCCBCCCCSSEEEEE
T ss_pred CCCCEEEECCCCCCCCCCcceEEEeccCCEEEEEEeCCCCcCCCCcEeEEEEEEEECCCCCCcceEEEEEecCCceeEEE
Confidence 3556777888888877899999999999999999999876 578999999999987644332332222 23458899
Q ss_pred EcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCC
Q psy8771 543 ISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583 (904)
Q Consensus 543 ~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p 583 (904)
|.+|.|++.|.|+|+|+|..|.|++|..+.++|....|.+|
T Consensus 82 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~p 122 (122)
T 1va9_A 82 LDNLKKFAQYGVVVQAFNRAGTGPSSSEINATTLESGPSSG 122 (122)
T ss_dssp EESCCSSCCEEEEEEEEETTEECCCCCCEECCCCSSCCCCC
T ss_pred eCCCCCCCEEEEEEEEEcCCCCCCCccCEEEEeCCCCCCCC
Confidence 99999999999999999999999999999999988887654
No 118
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.47 E-value=6.8e-13 Score=128.21 Aligned_cols=170 Identities=21% Similarity=0.276 Sum_probs=115.9
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCceee---cc--eEEEEeee--cCCeEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPV---GR--NVLTLDRV--TESENYTC 173 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~---~~--~~l~i~~l--~d~g~Y~c 173 (904)
..||.|...|.+ +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+.. ..++.+ .+ ..|.|.++ +|+|.|+|
T Consensus 2 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 79 (197)
T 2j8h_A 2 AMAPHFKEELRN-LNVRYQSNATLVCKVTGHPKPIVKWYRQ-GKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV 79 (197)
T ss_dssp -CCCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEEET-TEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEE
T ss_pred CCCCEEEEcCCc-cEEcCCCEEEEEEEEeecCCCEEEEEEC-CEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEE
Confidence 358999999988 9999999999999999999999999999 555543 345443 22 38999999 69999999
Q ss_pred EEEecCcceEEEEEEEEEeecCCCCCCCCC---CcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEE
Q psy8771 174 IAASVLGVIETSTIVKVQCKYAPLLTLPVA---PLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSE 246 (904)
Q Consensus 174 ~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~---p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~ 246 (904)
.|.|..|..+..+.|.|.... ....|.. +..+.+. ....+.|.+...+.+.. .+.|...+. ...+..
T Consensus 80 ~~~n~~g~~~~~~~l~V~~~p--~~~~~~~~~~~~~~~~~--~g~~~~l~C~~~g~p~p--~i~W~~~~~~~~~~~~~~~ 153 (197)
T 2j8h_A 80 RATNQGGSVSGTASLEVEVPA--KIHLPKTLEGMGAVHAL--RGEVVSIKIPFSGKPDP--VITWQKGQDLIDNNGHYQV 153 (197)
T ss_dssp EEEETTEEEEEEEEEEEEEEE--EECCSSCBTTBEEEEEE--TTCCCEEEEEEEEESCC--EEEEEESSCEECSSSSCEE
T ss_pred EEEECCCceeEEEEEEEcCCC--cCCCCccccccCeEEEe--CCCEEEEEEEEEecCCC--cEEEEECCEEeecCCCEEE
Confidence 999999998888888887322 1222211 2223232 23344444443322222 344443321 122333
Q ss_pred eecceeceEEEcC-CCCCCeEEEEEEEEcCCCCC
Q psy8771 247 ISGIITTYYTVRN-LSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 247 ~~~~~~~~~~i~~-L~p~~~Y~~~v~a~n~~g~s 279 (904)
........+.|.+ +...+.+.|+|.|.|..|..
T Consensus 154 ~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~ 187 (197)
T 2j8h_A 154 IVTRSFTSLVFPNGVERKDAGFYVVCAKNRFGID 187 (197)
T ss_dssp EECSSEEEEECTTCCCGGGCEEEEEEEEETTEEE
T ss_pred EEcCCceEEEEeCCCCcccCEeEEEEEEeCCCcE
Confidence 3333457899999 99999999999999998864
No 119
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.47 E-value=1.2e-12 Score=127.96 Aligned_cols=173 Identities=16% Similarity=0.225 Sum_probs=117.6
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-----cceEEEEeee---cCCeEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----GRNVLTLDRV---TESENYTC 173 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-----~~~~l~i~~l---~d~g~Y~c 173 (904)
..||.|...|.+ +.+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+........ ....|.|.++ +|+|.|+|
T Consensus 4 ~~~P~~~~~p~~-~~v~~G~~v~L~C~~~g~p~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 81 (212)
T 2yd6_A 4 ETPPRFTRTPVD-QTGVSGGVASFICQATGDPRPKIVWNKK-GKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYEC 81 (212)
T ss_dssp CEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEE
T ss_pred CCCCeEEeCcce-eEEecCCeEEEEEEEeeCCCCEEEEEEC-CcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEE
Confidence 568999999998 9999999999999999999999999999 666654432221 3457999987 59999999
Q ss_pred EEEecCcceEEEEEEEEEeecCCCCCCC---CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC-------CC
Q psy8771 174 IAASVLGVIETSTIVKVQCKYAPLLTLP---VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN-------TP 243 (904)
Q Consensus 174 ~a~n~~g~~~~~~~l~v~~~~~~~~~~P---~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~-------~~ 243 (904)
.|.|..|.....+.|.|..........| ..|....+ .....+.|.+...+.+... +.|...+.. ..
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~--~~g~~v~l~C~~~g~p~p~--v~W~~~g~~l~~~~~~~~ 157 (212)
T 2yd6_A 82 VASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVV--ERTRTATMLCAASGNPDPE--ITWFKDFLPVDTSNNNGR 157 (212)
T ss_dssp EEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEE--ETTSCEEEEEEEECSSCCE--EEEEETTEEC------CC
T ss_pred EEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeE--ecCCCEEEEEEecCCCCCe--EEEEECCccccCcCCCce
Confidence 9999999988888888873211000001 01222222 2234555555544322222 444443211 12
Q ss_pred eEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 244 YSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 244 ~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
+..........+.|.++...+.+.|+|.|.|..|...
T Consensus 158 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~ 194 (212)
T 2yd6_A 158 IKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRY 194 (212)
T ss_dssp EEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred EEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccc
Confidence 2222223357899999999999999999999999754
No 120
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.47 E-value=1.1e-13 Score=119.95 Aligned_cols=112 Identities=32% Similarity=0.489 Sum_probs=95.7
Q ss_pred CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEE
Q psy8771 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFV 778 (904)
Q Consensus 699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 778 (904)
|.|..|..+.++|.+.+|. +|.++++...+.+++.|+|+++. ++.+.+|.|+|+..+...+ ........+.++
T Consensus 1 G~g~~S~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~----~~~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~ 73 (115)
T 1x5z_A 1 GSSGSSGDIQVITQTGVPG-QPLNFKAEPESETSILLSWTPPR----SDTIANYELVYKDGEHGEE--QRITIEPGTSYR 73 (115)
T ss_dssp CCCCCCCCCCCCCCSCCCC-CCEEEEEECSSSSEEEEEEECCS----CCCCCEEEECBEESSSCCC--BCCEECSSSEEE
T ss_pred CCCCCCCCEEEECCCCCCC-CCccCEeeeCCCCEEEEEEcCCC----CCCccEEEEEEEeCCCCCc--eEEecCCCcEEE
Confidence 6788888999999998887 78999999999999999999984 2478999999998765433 222223679999
Q ss_pred ecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817 (904)
Q Consensus 779 i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~ 817 (904)
|.+|++++.|.|+|+|.|..|.|.+|..+.++|...+|+
T Consensus 74 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~ 112 (115)
T 1x5z_A 74 LQGLKPNSLYYFRLAARSPQGLGASTAEISARTMQSSGP 112 (115)
T ss_dssp EECCCTTCEEEECEEEECSSCEEEECCCEEEECCCCCCC
T ss_pred ECCCCCCCeEEEEEEEECCCcccCCCcCEEEecCCCCCC
Confidence 999999999999999999999999999999999988775
No 121
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.47 E-value=4e-13 Score=117.33 Aligned_cols=116 Identities=22% Similarity=0.384 Sum_probs=95.4
Q ss_pred CCCCCCCCceeeecCCCCCCCCCCeEEE-ecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEeecCceEE
Q psy8771 464 GEGATTPPIPVRTKQYEPGTAPRDVQVR-PLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVVDNNQLT 541 (904)
Q Consensus 464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~-~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 541 (904)
|.|.+|..+.+.|....| .+|.++.+. ..+.+++.|+|++|.+.++ .+.+|.|+++..... ..|........+.+
T Consensus 1 G~s~~S~~~~~~t~~~~P-~~P~~~~~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~ 77 (120)
T 2crm_A 1 GSSGSSGVVEFTTCPDKP-GIPVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNG--NKWEMIYSGATREH 77 (120)
T ss_dssp CCCTTCSCCSCCSCCCCC-CCCCCCEEEEEEETTEEEEECCCCTTCCSSCCCEEEEEEEESSSS--CCCEEEECSSCSEE
T ss_pred CCCCCcCCEEEEeCCCCC-CCCCCCEEeeccCCCEEEEEECCCCcCCCCeeeEEEEEEccCCCC--cCCEEEEeccccEE
Confidence 567788888888776655 678888777 7788999999999887644 799999999987532 46777666678889
Q ss_pred EEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCC
Q psy8771 542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQ 582 (904)
Q Consensus 542 ~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~ 582 (904)
.+.+|.+++.|.|+|+|+|..|.|.+|..+.+.|....|.+
T Consensus 78 ~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~p~p 118 (120)
T 2crm_A 78 LCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVSGPS 118 (120)
T ss_dssp EECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCSCCS
T ss_pred EECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCCCCC
Confidence 99999999999999999999999999998888887655543
No 122
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.47 E-value=5.6e-13 Score=145.35 Aligned_cols=233 Identities=15% Similarity=0.217 Sum_probs=145.7
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC--------------CCceecccccccccceEEEEeeeccCCee-eeeeeeccC-C
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP--------------NGQITHPPTRAARSHARLAAQSVLRRGRL-AHAVRQVAD-P 99 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~--------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~v~~-~ 99 (904)
....|.|...+.+...|.|.+.... ++.+....+...+.....|...+...... ....+.+.. +
T Consensus 137 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p 216 (403)
T 3laf_A 137 DTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDP 216 (403)
T ss_dssp SCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCC
T ss_pred CeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCC
Confidence 5566667666778889999875321 23344444444454445555444332222 233344332 1
Q ss_pred CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCcee-ecceEEEEeee--cCCeEEEEEE
Q psy8771 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLP-VGRNVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~-~~~~~l~i~~l--~d~g~Y~c~a 175 (904)
....++.+...+.. ..+.+|+.++|.|.+.|.|.+.+.|+|+ +..+.. ..++. ..++.|.|.++ +|+|.|+|.|
T Consensus 217 ~~~~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~p~~~~~W~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a 294 (403)
T 3laf_A 217 GLHRQLYFLQRPSN-VIAIEGKDAVLECCVSGYPPPSFTWLRG-EEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVV 294 (403)
T ss_dssp CCCEEEEEEECCCC-EEEETTSCEEECCEEEEESCCEEEEEET-TEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEE
T ss_pred CcccCceEecCCCc-eEecCCCcEEEEEEcCCCCCCeEEEEEC-CeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEE
Confidence 12223456667777 8899999999999999999999999999 555543 33333 35678999999 6999999999
Q ss_pred EecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC---CCeEEeeccee
Q psy8771 176 ASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN---TPYSEISGIIT 252 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~---~~~~~~~~~~~ 252 (904)
.|..|..+..+.|.|.... .. ...|.++.+. ....++|.+...+.+.. .+.|...+.. ....... ..
T Consensus 295 ~n~~g~~~~~~~l~V~~~p--~~--~~~~~~~~~~--~g~~v~l~C~~~g~p~p--~v~W~~~g~~~~~~~~~~~~--~~ 364 (403)
T 3laf_A 295 TYKNENISASAELTVLVPP--WF--LNHPSNLYAY--ESMDIEFECAVSGKPVP--TVNWMKNGDVVIPSDYFQIV--GG 364 (403)
T ss_dssp EETTEEEEEEEEEEEEEEE--EE--EECCCCEECC--TTCCEEECCEEEEESCC--EEEEEETTEECCCSSSEEEE--TT
T ss_pred EcCCCceEEEEEEEEECCC--cE--eecCcceEEe--cCCeEEEEEEEeeccCC--EEEEEECCEECCCCCcEEEe--cC
Confidence 9999999999999887321 11 1233343332 23345555543322222 2444433211 1111111 23
Q ss_pred ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
..+.|.++...+.+.|+|.|.|..|...
T Consensus 365 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 392 (403)
T 3laf_A 365 SNLRILGVVKSDEGFYQCVAENEAGNAQ 392 (403)
T ss_dssp TEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred ccEEEeccccccCEEEEEEEEcCCceEE
Confidence 5699999999999999999999998754
No 123
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.47 E-value=4.2e-13 Score=144.86 Aligned_cols=150 Identities=19% Similarity=0.333 Sum_probs=117.8
Q ss_pred CCCCCcEEEeccCCceEEEEeCCCC-----------CCCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCC
Q psy8771 35 TAPRDVQVRPLSSSTMVIQWDEPET-----------PNGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRV 103 (904)
Q Consensus 35 ~~p~~l~~~~~~~~s~~v~W~~~~~-----------~~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~ 103 (904)
+....|.|...+.+.+.+.|.+... .+|.+....+...|...+.|...+..+.......+.+ ..
T Consensus 220 G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v-----~~ 294 (384)
T 3kld_A 220 GTTVKLECFALGNPVPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTF-----YA 294 (384)
T ss_dssp TSCEEEEEEEEEESCCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE-----EE
T ss_pred CCcEEEEEEEeecCCCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEE-----ec
Confidence 3567788888889999999986421 1334444445555555555655554444444445554 45
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGV 181 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~ 181 (904)
+|.|...+.+ ..+..|+.+.|.|.+.|.|.|.|+|+|+ +..+....++.+.++.|.|.++ +|+|.|+|.|.|..|.
T Consensus 295 ~P~~~~~~~~-~~v~~g~~v~l~C~~~g~P~p~i~W~k~-g~~l~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~ 372 (384)
T 3kld_A 295 QPNWVQIIND-IHVAMEESVFWECKANGRPKPTYRWLKN-GDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHGV 372 (384)
T ss_dssp EEEEEECCCC-EEECTTCCEEEECEEEEESCCEEEEEET-TEECCCBTTEEEETTEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred CCccccCCCc-eEecCCCCEEEEeECCccCCCeEEEEEC-CEECCCCccEEEeCCEEEEeecChhhCEEEEEEEEeCCce
Confidence 7888888888 9999999999999999999999999999 7778777888888889999998 7999999999999999
Q ss_pred eEEEEEEEEE
Q psy8771 182 IETSTIVKVQ 191 (904)
Q Consensus 182 ~~~~~~l~v~ 191 (904)
..+++.|.|.
T Consensus 373 ~~~~a~L~V~ 382 (384)
T 3kld_A 373 IFSSAELSVI 382 (384)
T ss_dssp EEEEEEEEEC
T ss_pred EEeceEEEEe
Confidence 9999999886
No 124
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=7.4e-13 Score=114.54 Aligned_cols=105 Identities=32% Similarity=0.620 Sum_probs=88.7
Q ss_pred ecCCCCCCCCCCeEEEec--CCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe-ecCceEEEEcCCCCCCeE
Q psy8771 476 TKQYEPGTAPRDVQVRPL--SSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV-VDNNQLTTISDLTPHTIY 552 (904)
Q Consensus 476 t~~~~p~~~p~~l~v~~~--~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y 552 (904)
|.+..|+.+|.++.+... +.+++.|+|++|...+|.+.+|.|+|+.........|.... ....+.+.|.+|.|++.|
T Consensus 3 T~~~~P~~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y 82 (114)
T 2ede_A 3 SGSSGPTSAPKDLTVITREGKPRAVIVSWQPPLEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDTMY 82 (114)
T ss_dssp CCCCCCCSCCEEEEEEECSSCSSCEEEEEECCSSCSSCCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECSCCSSCEE
T ss_pred CCCCCCCCCCcceEEEEccCCCCEEEEEECCCCCCCCceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcCCCCCCEE
Confidence 445678899999999888 77999999999988888999999999986654445565444 367788999999999999
Q ss_pred EEEEEEEeCCCCCCCCCcEEEecCCCCC
Q psy8771 553 TIRVQAFTSVGPGPLSAPVLVKTQQGVP 580 (904)
Q Consensus 553 ~~~V~a~~~~g~~~~S~~~~~~t~~~~p 580 (904)
.|+|+|+|..|.|++|..+.++|....|
T Consensus 83 ~~~V~A~n~~G~g~~S~~~~~~T~~~~p 110 (114)
T 2ede_A 83 YFRIQARNSKGVGPLSDPILFRTLKVSG 110 (114)
T ss_dssp EEEEEEECSSCBCCCCCCEEEECCCSSC
T ss_pred EEEEEEEeCCcCcCCcccEEEEecCCCC
Confidence 9999999999999999999999866543
No 125
>1wj3_A KIAA1496 protein; beta sandwich, PANG, structural genomics, riken structural genomics/proteomics initiative, RSGI, neuropeptide; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.47 E-value=7e-13 Score=114.34 Aligned_cols=112 Identities=21% Similarity=0.379 Sum_probs=92.9
Q ss_pred CCCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCC--CCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEE
Q psy8771 464 GEGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLT 541 (904)
Q Consensus 464 g~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 541 (904)
|.++.|..+.+.|.+++|..+|.++++.. +.++|.|+|++| ...+|.+.+|+|+|+...... + .......+.+
T Consensus 1 G~G~~S~~v~~~T~e~~P~~~P~~v~~~~-~~~si~l~W~~p~~~~~ng~i~gY~v~y~~~~~~~---~-~~~~~~~~~~ 75 (117)
T 1wj3_A 1 GSSGSSGTVNVTTKKTPPSQPPGNVVWNA-TDTKVLLNWEQVKAMENESEVTGYKVFYRTSSQNN---V-QVLNTNKTSA 75 (117)
T ss_dssp CCCCCCCCCCCCCSCCCCCCCCCSCBCCE-ETTEEEEECCCCCCCSSSCCEEEEEEEEEESSCSS---C-EEEEESSSEE
T ss_pred CcCCCCCCEEEEecCCCCCCCCccEEEEE-eCCEEEEEEcCCCccccCCceeEEEEEEEECCCCC---C-eEEeCCCcEE
Confidence 56778888999999989988999998877 778999999998 568899999999999876432 2 2233445667
Q ss_pred EEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCC
Q psy8771 542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPS 581 (904)
Q Consensus 542 ~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~ 581 (904)
.+. |.+++.|.|+|+|+|..|.|++|..+.+.|..+.|+
T Consensus 76 ~~~-L~~~t~Y~~~V~A~n~~G~Gp~S~~v~~~T~~~v~p 114 (117)
T 1wj3_A 76 ELV-LPIKEDYIIEVKATTDGGDGTSSEQIRIPRITSSGP 114 (117)
T ss_dssp EEE-CCCSSCEEEEEEEEESSCCCCBCCCEEECCCCCCCS
T ss_pred EEE-CCCCCEEEEEEEEECCCccCCCCCCEEEEcCCCCCC
Confidence 777 999999999999999999999999999999776543
No 126
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.47 E-value=9.6e-13 Score=143.51 Aligned_cols=305 Identities=14% Similarity=0.170 Sum_probs=175.7
Q ss_pred CCCCCcEEEecc-CCceEEEEeCCCC-------------CCCceecccc-----cccccceEEEEeeeccCCeee--eee
Q psy8771 35 TAPRDVQVRPLS-SSTMVIQWDEPET-------------PNGQITHPPT-----RAARSHARLAAQSVLRRGRLA--HAV 93 (904)
Q Consensus 35 ~~p~~l~~~~~~-~~s~~v~W~~~~~-------------~~g~i~~~~~-----~~~~~~~~~~~~~~~~~g~~~--~~~ 93 (904)
+.+..|.|...+ .+...+.|.+... .+|.+....+ ...|.....|...+...|... ...
T Consensus 36 G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~~~s~~~~ 115 (403)
T 3laf_A 36 GGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLPNGSLLIQNILHSRHHKPDEGLYQCEASLGDSGSIISRTAK 115 (403)
T ss_dssp TCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECTTSCEEECSCCCBTTBCSSCEEEEEEEECGGGCEEECCCEE
T ss_pred CCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEecCCcEEEeeeeccCCCCCcceEEEEEEEeCCCccEEEEEEE
Confidence 355566666554 4677899986521 1343322222 222444444555544444432 223
Q ss_pred eeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC---CCCcee-ecceEEEEeee--cC
Q psy8771 94 RQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT---PDDKLP-VGRNVLTLDRV--TE 167 (904)
Q Consensus 94 ~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~---~~~~~~-~~~~~l~i~~l--~d 167 (904)
+. +..||.+...+.. +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+. ...+.. ..++.|.|.++ +|
T Consensus 116 l~-----v~~p~~~~~~~~~-~~~~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 188 (403)
T 3laf_A 116 VM-----VAGPLRFLSQTES-ITAFMGDTVLLKCEVIGDPMPTIHWQKN-QQDLNPIPGDSRVVVLPSGALQISRLQPGD 188 (403)
T ss_dssp EE-----ECCCCEECSCCCC-EEEETTSCEEECCCEECSSCCEEEEEES-SSBCCCCTTCCSEEECTTSCEEECSCCGGG
T ss_pred EE-----ecCCCccccCCCc-EEEEcCCeEEEEEEEcccCCCeEEEEEC-CEeccccCCceEEEEcCCceEEEccccccc
Confidence 33 2457888888887 9999999999999999999999999999 55552 233333 35778999999 69
Q ss_pred CeEEEEEEEecCcce-EEEEEEEEEeecCCCCCCCCC---------CcceEEEeecCCeEEEEEeCCCccceEEEEEEEe
Q psy8771 168 SENYTCIAASVLGVI-ETSTIVKVQCKYAPLLTLPVA---------PLDVKISEVTATSVRLDWTYPSETLLYYVIQYKP 237 (904)
Q Consensus 168 ~g~Y~c~a~n~~g~~-~~~~~l~v~~~~~~~~~~P~~---------p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~ 237 (904)
+|.|+|.|.|..|.. .....|.|. ..|.. |.++.+. ....++|.+...+.+.. .+.|..
T Consensus 189 ~G~Y~C~~~n~~~~~~~~~~~l~v~-------~~p~~~~~~~~~~~~~~~~~~--~g~~~~l~C~~~~~p~~--~~~W~~ 257 (403)
T 3laf_A 189 SGVYRCSARNPASTRTGNEAEVRIL-------SDPGLHRQLYFLQRPSNVIAI--EGKDAVLECCVSGYPPP--SFTWLR 257 (403)
T ss_dssp CEEEEEEEECSSCCCBCCCEEEEEE-------CCCCCCEEEEEEECCCCEEEE--TTSCEEECCEEEEESCC--EEEEEE
T ss_pred CEEEEEEEEcCCCceeccceeEEEe-------cCCCcccCceEecCCCceEec--CCCcEEEEEEcCCCCCC--eEEEEE
Confidence 999999999988763 355677776 33322 2222222 23455555554322222 244443
Q ss_pred CCCC----CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEE
Q psy8771 238 KAAN----TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVI 313 (904)
Q Consensus 238 ~~~~----~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l 313 (904)
.+.. ....... ....+.|.++...+.+.|+|.|.|..|....+..+.+...+. ....|.++.+.. ...+.|
T Consensus 258 ~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~-~~~~~~~~~~~~--g~~v~l 332 (403)
T 3laf_A 258 GEEVIQLRSKKYSLL--GGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPW-FLNHPSNLYAYE--SMDIEF 332 (403)
T ss_dssp TTEECCCSSSSEEEE--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEE-EEECCCCEECCT--TCCEEE
T ss_pred CCeeccCCCceEEEC--CccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCc-EeecCcceEEec--CCeEEE
Confidence 3211 1111111 125799999999999999999999987643333333322111 011223333222 233444
Q ss_pred EecCCCCCCceeeEEEEEe---------eceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771 314 QWDEPETPNGQITAKHHRR---------IGLVETYSLTGLYPNTLYYIWLAAQSPRGE 362 (904)
Q Consensus 314 ~W~~p~~~~~~~~~~~~~~---------~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~ 362 (904)
.+.....+...+.++.... ......+.|..+.....-.+++.|.|..|.
T Consensus 333 ~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 390 (403)
T 3laf_A 333 ECAVSGKPVPTVNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAGN 390 (403)
T ss_dssp CCEEEEESCCEEEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred EEEEeeccCCEEEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEEEcCCce
Confidence 4433222222333322110 111235788888888888888999988774
No 127
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.46 E-value=7.8e-13 Score=144.28 Aligned_cols=236 Identities=19% Similarity=0.223 Sum_probs=142.9
Q ss_pred CCCCcEEEe-ccCCceEEEEeCCCC------------CCCceeccccccccc-ceEEEEeeeccCCe-ee--eeeeec--
Q psy8771 36 APRDVQVRP-LSSSTMVIQWDEPET------------PNGQITHPPTRAARS-HARLAAQSVLRRGR-LA--HAVRQV-- 96 (904)
Q Consensus 36 ~p~~l~~~~-~~~~s~~v~W~~~~~------------~~g~i~~~~~~~~~~-~~~~~~~~~~~~g~-~~--~~~~~v-- 96 (904)
....|.|.. .+.+...+.|.+... .+|.+........+. ....|...+..... .. ...+.+
T Consensus 132 ~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~ 211 (404)
T 3p3y_A 132 APLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLT 211 (404)
T ss_dssp SCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEEC
T ss_pred CcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEec
Confidence 455555554 566788999987631 134444333444442 34445444333321 11 122222
Q ss_pred cCCCCCCCCeEEcCCC--CceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC-ceeecceEEEEeee--cCCeEE
Q psy8771 97 ADPVRRVPPQFSIPPP--ALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD-KLPVGRNVLTLDRV--TESENY 171 (904)
Q Consensus 97 ~~~~~~~~P~~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~-~~~~~~~~l~i~~l--~d~g~Y 171 (904)
.......+|.+..++. ....+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+.... ++...++.|.|.++ +|+|.|
T Consensus 212 ~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 290 (404)
T 3p3y_A 212 TRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKK-GGDLPSDKAKFENFNKALRITNVSEEDSGEY 290 (404)
T ss_dssp CSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEET-TBCCCTTTEEEEGGGTEEEESSCCGGGCEEE
T ss_pred cCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEEC-CEECCCCcccccccCceEEEccCCHhHCEEE
Confidence 1222345666655442 126789999999999999999999999999 66665443 34446789999999 699999
Q ss_pred EEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe---EEee
Q psy8771 172 TCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY---SEIS 248 (904)
Q Consensus 172 ~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~---~~~~ 248 (904)
+|.|.|..|..+..+.|.|.... .+ ...|.+..+.. ...++|.+...+.+.. .+.|...+..... ....
T Consensus 291 ~C~a~n~~g~~~~~~~l~V~~~p--~~--~~~~~~~~v~~--g~~~~l~C~~~g~p~p--~v~W~~~g~~~~~~~~~~~~ 362 (404)
T 3p3y_A 291 FCLASNKMGSIRHTISVRVKAAP--YW--LDEPKNLILAP--GEDGRLVCRANGNPKP--TVQWMVNGEPLQSAPPNPNR 362 (404)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEE--EE--EECCCCEEECT--TCCEEEECEEEEESCC--EEEEEETTEEGGGSCCCTTE
T ss_pred EEEEEeCCCcEEEEEEEEEeCCC--ee--eccCCcceeec--CCcEEEEEEccccCCC--ceEEEECCEecCCCCCCceE
Confidence 99999999998888888887321 11 12334444332 3345555544322222 2444433211000 0000
Q ss_pred cceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 249 GIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 249 ~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
......+.|.++...+.+.|+|.|.|..|...
T Consensus 363 ~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 394 (404)
T 3p3y_A 363 EVAGDTIIFRDTQISSRAVYQCNTSNEHGYLL 394 (404)
T ss_dssp EEETTEEEESSCCSSCCCEEEEEEEETTEEEE
T ss_pred EecCCEEEEeecCHHHCEEEEEEEEeCCCcEE
Confidence 11235799999999999999999999998653
No 128
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.46 E-value=2e-13 Score=119.43 Aligned_cols=114 Identities=20% Similarity=0.362 Sum_probs=92.5
Q ss_pred CCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEE
Q psy8771 700 EGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFV 778 (904)
Q Consensus 700 ~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~ 778 (904)
.+..+..+.+.|...+|. +|.++++...+.+++.|+|++|. +..+|.+.+|.|+|+..+...+ ....... ..+.++
T Consensus 2 ~sgss~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~-~~~~g~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~~ 78 (120)
T 1x5f_A 2 SSGSSGEHAPATTGPLPS-APRDVVASLVSTRFIKLTWRTPA-SDPHGDNLTYSVFYTKEGIARE-RVENTSHPGEMQVT 78 (120)
T ss_dssp CCCCCSSCCCCCCCCCCC-CCEEEEEEEECSSCEEEEEECCS-SCSSCCSSEEEEEEEETTCCCC-EEEECSSTTCSEEE
T ss_pred CCCCCCCEEecCCCCCCC-CCCCcEEEecCCCEEEEEECCCC-CCCCCcEEEEEEEEEECCCCCc-eEEEeccCCccEEE
Confidence 344455677788888776 78999999999999999999985 3678899999999998764433 1222233 789999
Q ss_pred ecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816 (904)
Q Consensus 779 i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P 816 (904)
|.+|+|++.|.|+|+|.|..|.|.+|..+.++|.+..|
T Consensus 79 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 116 (120)
T 1x5f_A 79 IQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESG 116 (120)
T ss_dssp ECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCCC
T ss_pred eCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCCCC
Confidence 99999999999999999999999999999999975433
No 129
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.46 E-value=4.3e-13 Score=115.74 Aligned_cols=104 Identities=17% Similarity=0.176 Sum_probs=85.5
Q ss_pred CCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC-CccEEEEec-CcceEEecCCCCCceEEE
Q psy8771 713 QYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD-SEASIVTLK-NQTSFVLDELKKWTEYRI 790 (904)
Q Consensus 713 ~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~-~~~~~~~~~-~~~~~~i~~L~p~t~Y~~ 790 (904)
+..|..+|.++.+...+.++|.|+|++|..+..+|.+.+|.|+|+..+... .......+. ..+.++|.+|+|++.|.|
T Consensus 5 ~~~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 84 (114)
T 1x4y_A 5 SSGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDI 84 (114)
T ss_dssp CCSCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEE
T ss_pred ccCCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCCcEeEEEcCCCCCCCEEEE
Confidence 446777899999999999999999999965568899999999998765431 111112333 668899999999999999
Q ss_pred EEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771 791 WVLAGTSIGDGPSSYPITIRTHEDDP 816 (904)
Q Consensus 791 ~V~a~~~~g~g~~s~~~~~~t~~~~P 816 (904)
+|+|+|..|.|++|..+.++|.+.++
T Consensus 85 ~V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 85 KMQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp EEEEECTTCCCCCCCCEEEECCCCCC
T ss_pred EEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 99999999999999999999987654
No 130
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=3.6e-13 Score=117.29 Aligned_cols=113 Identities=18% Similarity=0.223 Sum_probs=90.0
Q ss_pred CCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccE----EEEEEEEEEccCCCCccEEEEec-Ccc
Q psy8771 701 GATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHI----VYYKLQFVETGRSDSEASIVTLK-NQT 775 (904)
Q Consensus 701 ~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~----~~Y~v~~~~~~~~~~~~~~~~~~-~~~ 775 (904)
+..|....+.+....|..+|.+|++...+.++|.|+|+++. ..++.+ .+|+|+|+..+...... ..+. ..+
T Consensus 3 ~~~s~~~~~~~~~~~pp~~P~~l~~~~~s~tsi~lsW~~p~--~~~~~i~~~~~~Y~v~y~~~~~~~~~~--~~~~~~~~ 78 (123)
T 2edd_A 3 SGSSGFPTSVPDLSTPMLPPVGVQAVALTHDAVRVSWADNS--VPKNQKTSEVRLYTVRWRTSFSASAKY--KSEDTTSL 78 (123)
T ss_dssp SCCSCCCCSCSSCCCSSCCCEEEEEEEEETTEEEEEEECSS--SCSSCCCSCCCCEEEEEEETTCTTCCC--CCEEESSS
T ss_pred CccCCCCcCCCccCCCCCCCcceEEEEcCCCeEEEEecCCC--CCcccccCcCceEEEEEEECCCCCccE--EEEeCCce
Confidence 34455666667766777789999999999999999999874 344444 49999999874322211 2233 688
Q ss_pred eEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC-CCC
Q psy8771 776 SFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED-DPS 817 (904)
Q Consensus 776 ~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~-~P~ 817 (904)
.++|.||+|++.|.|+|+|.|..|.|++|..+.++|.++ +|+
T Consensus 79 ~~~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~~~Ps 121 (123)
T 2edd_A 79 SYTATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEASGPS 121 (123)
T ss_dssp EEEEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCSSSCC
T ss_pred EEEecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCCCCCC
Confidence 999999999999999999999999999999999999999 885
No 131
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.46 E-value=7.9e-13 Score=142.93 Aligned_cols=232 Identities=15% Similarity=0.163 Sum_probs=138.7
Q ss_pred CCCcEEEe-ccCCceEEEEeCCCCC--------------CCceecccccccccceEEEEeeeccCCeee-----eeeeec
Q psy8771 37 PRDVQVRP-LSSSTMVIQWDEPETP--------------NGQITHPPTRAARSHARLAAQSVLRRGRLA-----HAVRQV 96 (904)
Q Consensus 37 p~~l~~~~-~~~~s~~v~W~~~~~~--------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~-----~~~~~v 96 (904)
...|.|.. .+.+.+.+.|.+.... +|.+........+.....|...+....... ...+.+
T Consensus 118 ~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v 197 (382)
T 1cs6_A 118 GVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSL 197 (382)
T ss_dssp CEEECCCCCSEESCCEEEEEESSTTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEE
T ss_pred cEEEEeCCCCCCCCcEEEEEECCCccccccCceEEEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeecc
Confidence 33444432 2346789999765322 233444444444544445554443321111 122222
Q ss_pred cC-CCCCCCCeEEcC-CCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEE
Q psy8771 97 AD-PVRRVPPQFSIP-PPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYT 172 (904)
Q Consensus 97 ~~-~~~~~~P~~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~ 172 (904)
.. .....+|.+... +.. ..+.+|+.++|.|.+.|.|.|.|.|+|+ +..+.. ++......|.|.++ +|+|.|+
T Consensus 198 ~~~~~~~~~P~~~~~~~~~-~~~~~G~~v~l~C~~~g~p~~~i~W~~~-~~~~~~--~~~~~~~~L~i~~~~~~d~G~Y~ 273 (382)
T 1cs6_A 198 AAEDARQYAPSIKAKFPAD-TYALTGQMVTLECFAFGNPVPQIKWRKL-DGSQTS--KWLSSEPLLHIQNVDFEDEGTYE 273 (382)
T ss_dssp ESCCCCCEEEEEEECCCSE-EEEETTCCEEEECEEEEESCCEEEEEEC-CSCCSC--CCSBSSSEEEECSCCGGGCEEEE
T ss_pred chhhcccCCCceeccCCCc-eEEeCCCeEEEEEEEccCCCCEEEEEEC-Cccccc--EEecCCcEEEEccCChhhCEEEE
Confidence 11 122346766654 445 8999999999999999999999999998 444433 33446778999999 6999999
Q ss_pred EEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeeccee
Q psy8771 173 CIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIIT 252 (904)
Q Consensus 173 c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~ 252 (904)
|.|.|..|.....+.|.|.... ... ..+....+. ....++|.+...+.+... +.|...+.............
T Consensus 274 C~a~n~~g~~~~~~~l~V~~~p--~~~--~~~~~~~~~--~g~~~~l~C~~~g~p~p~--v~W~~~g~~~~~~~~~~~~~ 345 (382)
T 1cs6_A 274 CEAENIKGRDTYQGRIIIHAQP--DWL--DVITDTEAD--IGSDLRWSCVASGKPRPA--VRWLRDGQPLASQNRIEVSG 345 (382)
T ss_dssp EEEEETTEEEEEEEEEEEEEEE--EEE--ECCCCEEEE--TTCCEEEECEEEEESCCE--EEEEETTEECCCCSSEEEET
T ss_pred EEEEcCCCeEEEEEEEEEecCC--Ccc--cCCCccEEc--CCCeEEEEEEeeeecCCE--EEEEECCEECCCCceEEEEC
Confidence 9999999998888888887321 111 123333332 234555555543222222 44443321100000000123
Q ss_pred ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
..+.|.++...+.+.|+|.|.|..|...
T Consensus 346 ~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 373 (382)
T 1cs6_A 346 GELRFSKLVLEDSGMYQCVAENKHGTVY 373 (382)
T ss_dssp TEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred CEEEECcCCcccCEEEEEEEEeCCCeEE
Confidence 5799999999999999999999998653
No 132
>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C
Probab=99.46 E-value=3.5e-11 Score=123.19 Aligned_cols=271 Identities=15% Similarity=0.176 Sum_probs=168.8
Q ss_pred CCCCCCeEEEecCCceEEEEecCC-CCCC-CceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771 482 GTAPRDVQVRPLSSSTMVIQWDEP-ETPN-GQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF 559 (904)
Q Consensus 482 ~~~p~~l~v~~~~~~~~~l~W~~p-~~~~-~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~ 559 (904)
..+|.||.+...+...+.|+|++| .... ..-..|.|.++..+. ..|.... ........|..+ |.++|++.
T Consensus 12 ~~pP~nl~i~~~~~~~~~l~W~~~p~~~~~~~~l~Y~v~~~~~~~---~~w~~~~---t~~~~~~~L~~~--~~~rVrt~ 83 (317)
T 3qt2_A 12 LLPPVNFTIKVTGLAQVLLQWKPNPDQEQRNVNLEYQVKINAPKE---DDYETRI---TESKAVTILHMG--FSASVRTI 83 (317)
T ss_dssp CCCCEEEEEEEEETTEEEEEEECCTTSSCSSSCCEEEEEEEESSC---EEEEESS---SEEEEECCCTTC--EEEEEEEE
T ss_pred cCCCcceEEEECCCceEEEEECCCCccccCcCcEEEEEEECCCCC---cccEeec---cccccccccCCC--eEEEEEEE
Confidence 468999999988889999999994 3322 234789999988752 4455332 344456677765 88899887
Q ss_pred eCCCCC-CCCCcEEEec--CCCC-CCCCCCceEEecC-----------CCeEEEEEeCCCCCCCCceEEEEEeccCCCCC
Q psy8771 560 TSVGPG-PLSAPVLVKT--QQGV-PSQPRDLRAVDIQ-----------ETAVTLAWSKPTHSGENIISYELYWNDTYAKP 624 (904)
Q Consensus 560 ~~~g~~-~~S~~~~~~t--~~~~-p~~p~~~~~~~~~-----------~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p 624 (904)
...|.+ .+|..+.... ..+. |..|.+|.+...+ ...+..+|.+...
T Consensus 84 ~~~~~s~~~S~w~~~~~~~~~G~p~~~p~nlsC~~~~~~~~~~~~~~~~~~l~CtW~pG~~------------------- 144 (317)
T 3qt2_A 84 LQNDHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWMVGTD------------------- 144 (317)
T ss_dssp EECSSCEEECCCEEEEECCCSCBGGGSCEEEEEEEEEEECSCSSSCCEEEEEEEEEECCTT-------------------
T ss_pred ECCCCCccccccccccccCCCCCCCCcceeeEEEEccccccccccccccceEEEEeeCCCC-------------------
Confidence 775532 3455554333 2233 3478888877655 4678889987542
Q ss_pred cceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccc--eEEec--ccceEEEeCCC----CCcEEEEEEEEEc
Q psy8771 625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKH--HRRIG--LVETYSLTGLY----PNTLYYIWLAAQS 696 (904)
Q Consensus 625 ~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~--~~~~~--~~~~~~l~~L~----p~t~Y~v~V~a~~ 696 (904)
......|.+.|+..+..... ..... ....+.+.... ....|.|.|.+.+
T Consensus 145 -----------------------~~~~t~Y~L~y~~~~~~~eC~~y~~~~~~~~~~C~f~~~~~~~~~~~~~~i~V~gss 201 (317)
T 3qt2_A 145 -----------------------APEDTQYFLYYRYGSWTEECQEYSMDTLGRNIACWFPRTFILSKGRDWLAVLVNGSS 201 (317)
T ss_dssp -----------------------CCTTCEEEEEEEETTEEEECCCEEECTTSCEEEEEESSCSCCTTCCSEEEEEEEEEC
T ss_pred -----------------------CCCCeeEEEEEEeCCCCeeCCccccCCCcceeEEEeCCccccccCcEEEEEEEEcCC
Confidence 12235677777765421111 11111 12466676543 3468899998766
Q ss_pred CCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcce
Q psy8771 697 PRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTS 776 (904)
Q Consensus 697 ~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~ 776 (904)
..+.-. +....+.....+.+.||.+|.+... .+.+.|+|..|... .......|+|+|+......+ ....+ ..+.
T Consensus 202 ~~~~i~-s~~~~~~l~~iVkp~PP~nL~v~~~-~~~l~v~W~~P~~~-~~~~~L~Yevryr~~~~~~~--~~~~~-~~~~ 275 (317)
T 3qt2_A 202 KHSAIR-PFDQLFALHAIDQINPPLNVTAEIE-GTRMSIQWEKPVSA-FPIHCFDYEVKIHNTRNGYL--QIEKL-MTNA 275 (317)
T ss_dssp TTSCBC-CEEEEEEHHHHBCCCCCEEEEEEEE-TTEEEEEEECCSSS-SCGGGEEEEEEEEETTTCCE--EEEEE-SSSE
T ss_pred CCcccc-ccceEEEHHHcCcCCCCceeEEEEe-CCcEEEEECCCCcc-cccCceEEEEEEEeCCCCcc--eEEEE-eeeE
Confidence 533211 2123344333344457889998854 58999999998532 22345799999998654322 11222 4456
Q ss_pred EEecCCCCCceEEEEEEEeeCC-----C-CCCCCCcEEe
Q psy8771 777 FVLDELKKWTEYRIWVLAGTSI-----G-DGPSSYPITI 809 (904)
Q Consensus 777 ~~i~~L~p~t~Y~~~V~a~~~~-----g-~g~~s~~~~~ 809 (904)
+.+ +|.+++.|.|+|||.... | .|++|.++.+
T Consensus 276 ~~l-~l~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~ 313 (317)
T 3qt2_A 276 FIS-IIDDLSKYDVQVRAAVSSMCREAGLWSEWSQPIYV 313 (317)
T ss_dssp EEE-ECCTTCCEEEEEEEEECTTTSSCCCCCCCCCCEEE
T ss_pred EEe-ecCCCCEEEEEEEEeecCCCCCCCCcCCCCCCEEE
Confidence 655 499999999999999542 2 4566766655
No 133
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.46 E-value=3.4e-13 Score=117.80 Aligned_cols=115 Identities=18% Similarity=0.229 Sum_probs=94.7
Q ss_pred CCCCCCCcEEEecCCCCCCCCCCceEE-ecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEec
Q psy8771 563 GPGPLSAPVLVKTQQGVPSQPRDLRAV-DIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAW 641 (904)
Q Consensus 563 g~~~~S~~~~~~t~~~~p~~p~~~~~~-~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w 641 (904)
|.|++|..+.+.|....|.+|.++.+. ..+.+++.|+|.++...
T Consensus 1 G~s~~S~~~~~~t~~~~P~~P~~~~~~~~~~~~sv~l~W~~p~~~----------------------------------- 45 (120)
T 2crm_A 1 GSSGSSGVVEFTTCPDKPGIPVKPSVKGKIHSHSFKITWDPPKDN----------------------------------- 45 (120)
T ss_dssp CCCTTCSCCSCCSCCCCCCCCCCCEEEEEEETTEEEEECCCCTTC-----------------------------------
T ss_pred CCCCCcCCEEEEeCCCCCCCCCCCEEeeccCCCEEEEEECCCCcC-----------------------------------
Confidence 567889998888988889999998887 77888999999988641
Q ss_pred cCCCCCCCceeeEEEEEEeCCc-cccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC
Q psy8771 642 SKPTHSGENIISYELYWNDTYA-KAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG 717 (904)
Q Consensus 642 ~~~~~~~~~~~~y~v~~~~~~~-~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~ 717 (904)
++..+.+|.|+|+.... ..+........+.+++.+|.+++.|.|+|+|+|..|.|.+|..+.++|...+|.
T Consensus 46 -----gg~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~p~ 117 (120)
T 2crm_A 46 -----GGATINKYVVEMAEGSNGNKWEMIYSGATREHLCDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVSGP 117 (120)
T ss_dssp -----CSSCCCEEEEEEEESSSSCCCEEEECSSCSEEEECSCCTTSCEEEEEEEEETTEECCCCCCCCCCCCCCSCC
T ss_pred -----CCCeeeEEEEEEccCCCCcCCEEEEeccccEEEECCCCCCCEEEEEEEEEcCCccCCCcccEEEEcCCCCCC
Confidence 23468899999988765 345445455678999999999999999999999999999999888888876554
No 134
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=5.5e-13 Score=115.33 Aligned_cols=104 Identities=24% Similarity=0.366 Sum_probs=87.0
Q ss_pred ecCCCCCCCCCCcEEEec--CCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC-CccEEEEec-CcceEEecCCCCCc
Q psy8771 711 TKQYVPGAPPQNVSCEPL--SSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD-SEASIVTLK-NQTSFVLDELKKWT 786 (904)
Q Consensus 711 t~~~~p~~~P~~l~~~~~--~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~-~~~~~~~~~-~~~~~~i~~L~p~t 786 (904)
|.+..|..+|.++++... +.+++.|+|++| ...+|.+.+|.|+|+...... ..+....+. ..+.++|.+|.|++
T Consensus 3 T~~~~P~~~P~~l~~~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t 80 (114)
T 2ede_A 3 SGSSGPTSAPKDLTVITREGKPRAVIVSWQPP--LEANGKITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDT 80 (114)
T ss_dssp CCCCCCCSCCEEEEEEECSSCSSCEEEEEECC--SSCSSCCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECSCCSSC
T ss_pred CCCCCCCCCCcceEEEEccCCCCEEEEEECCC--CCCCCceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcCCCCCC
Confidence 667778778999999887 789999999999 467889999999998754321 222334444 88999999999999
Q ss_pred eEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771 787 EYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816 (904)
Q Consensus 787 ~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P 816 (904)
.|.|+|+|.|..|.|++|..+.++|.+.+|
T Consensus 81 ~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 110 (114)
T 2ede_A 81 MYYFRIQARNSKGVGPLSDPILFRTLKVSG 110 (114)
T ss_dssp EEEEEEEEECSSCBCCCCCCEEEECCCSSC
T ss_pred EEEEEEEEEeCCcCcCCcccEEEEecCCCC
Confidence 999999999999999999999999987765
No 135
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.45 E-value=4.6e-13 Score=117.60 Aligned_cols=111 Identities=26% Similarity=0.425 Sum_probs=90.8
Q ss_pred cCCCCCCCCCCeeEEecCC------CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEE
Q psy8771 696 SPRGEGATTPPIPVRTKQY------VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIV 769 (904)
Q Consensus 696 ~~~G~~~~s~~~~~~t~~~------~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~ 769 (904)
+..|.|.+|..+.++|.+. +|. +|.+|++...+ +++.|+|++|. ..||.+.+|.|+|+. +. ......
T Consensus 2 t~~G~g~~S~~~~~~T~~~~~~~~~~P~-~P~~l~~~~~~-~sv~l~W~~P~--~~~g~i~~Y~v~y~~-~~--~~~~~~ 74 (126)
T 1x5i_A 2 SSGSSGPATDWLSAETFESDLDETRVPE-VPSSLHVRPLV-TSIVVSWTPPE--NQNIVVRGYAIGYGI-GS--PHAQTI 74 (126)
T ss_dssp CSCCCCCCCCCCCSCCCCTTSBCSSCCC-SCSEEEEEEET-TEEEEEEECCS--CTTBCCCEEEEEECS-SC--GGGEEE
T ss_pred CCCccCCCCCCEEeECccccCccCCCCC-CCCeeEEEecC-CEEEEEEcCCC--CCCCCEeEEEEEEEc-CC--CCceEE
Confidence 3568899999999999987 777 78999999887 99999999994 568999999999983 22 223445
Q ss_pred Eec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771 770 TLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHED 814 (904)
Q Consensus 770 ~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~ 814 (904)
.+. ..+.++|.+|+|++.|.|+|+|+|..|.|..+.. .+.|...
T Consensus 75 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~~-~~~T~~~ 119 (126)
T 1x5i_A 75 KVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLYE-SAVTRPH 119 (126)
T ss_dssp ECCTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCCC-CEECCCC
T ss_pred EeCCCeeEEEEeCCCCCCEEEEEEEEEeCCccCcceee-EEecccC
Confidence 555 8899999999999999999999999999988864 4444433
No 136
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.45 E-value=5e-13 Score=143.21 Aligned_cols=228 Identities=10% Similarity=-0.018 Sum_probs=148.9
Q ss_pred CcceeeeccceEEEEecC---CCCCcceeeEeeCCCCCCCCcEEEeccCCceEEEEeCCCCC----CCceeccccccccc
Q psy8771 2 DTRCYVESPEEVFIILCP---LPPLIPGYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETP----NGQITHPPTRAARS 74 (904)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~p~~~p~~l~~~~~~~~s~~v~W~~~~~~----~g~i~~~~~~~~~~ 74 (904)
.|+|.+.+......+... .+|.. .+ ..+....|.|...+.+.+.|.|.++... ++.+........+.
T Consensus 81 ~Y~C~~~n~~~~~~l~V~~~~~~~~~--~v----~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~L~i~~v~~~d~ 154 (363)
T 1wio_A 81 TYICEVEDQKEEVQLLVFGLTANSDT--HL----LQGQSLTLTLESPPGSSPSVQCRSPRGKNIQGGKTLSVSQLELQDS 154 (363)
T ss_dssp EEEEEETTEEEEEEEEEEEEEESSCS--SE----ESBSCEEEEEECCTTCCCCEEEECSSSCEEEESSEEEECSBCGGGC
T ss_pred EEEEEEEECCCcEEEEEEeCCCCCce--EE----ecCCCEEEEEEcCCCCCCeEEEEcCCCcccccceEEEEeeCChhcC
Confidence 478999887553333222 11211 11 1125566777777788899999987533 33344444445555
Q ss_pred ceEEEEeeeccCCeeeee--eeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEcc-----CCCCeEEEeeCCcccc
Q psy8771 75 HARLAAQSVLRRGRLAHA--VRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG-----SPMPFVKWRKGQNIEL 147 (904)
Q Consensus 75 ~~~~~~~~~~~~g~~~~~--~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-----~p~p~i~W~k~~~~~~ 147 (904)
....|...+. +..... .+.+ ..+|.. +.. +.+.+|+.+.|.|.+.| .|.|.|+|+|+ +..+
T Consensus 155 G~Y~C~a~~~--~~~~~~~~~l~v-----~~~p~~---~~~-~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~-g~~~ 222 (363)
T 1wio_A 155 GTWTCTVLQN--QKKVEFKIDIVV-----LAFQKA---SSI-VYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAE-RASS 222 (363)
T ss_dssp EECEEEEEET--TEEEEECCEECE-----ECCSCS---EEE-EEEETBCCEEEECCCCCCCCSSCEEEEEEEEES-SCCC
T ss_pred CEEEEEEecC--CCeEEEEEEEEE-----ecCCCC---CCc-eEEecCCEEEEEEEEecccccCCCceeEEEecC-CCCc
Confidence 5555555443 333222 3333 223322 133 78899999999999888 88899999999 6555
Q ss_pred CC--------CCceee------------c--ceEEEEeee--cCCeEEEEEEEec--CcceEEEEEEEEEeecCCCCCCC
Q psy8771 148 TP--------DDKLPV------------G--RNVLTLDRV--TESENYTCIAASV--LGVIETSTIVKVQCKYAPLLTLP 201 (904)
Q Consensus 148 ~~--------~~~~~~------------~--~~~l~i~~l--~d~g~Y~c~a~n~--~g~~~~~~~l~v~~~~~~~~~~P 201 (904)
.. +.++.+ . ...|.|.++ +|+|.|+|.|.|. .|..+..+.|.|. ..+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~-------~v~ 295 (363)
T 1wio_A 223 SKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVM-------RAT 295 (363)
T ss_dssp CCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEE-------EEC
T ss_pred cceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEE-------Eec
Confidence 44 444443 2 348999999 7999999999999 9999999999988 455
Q ss_pred CCCcceEEEeecCCe--EEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcC
Q psy8771 202 VAPLDVKISEVTATS--VRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNN 275 (904)
Q Consensus 202 ~~p~~l~~~~~~~~s--v~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~ 275 (904)
+.+..|.+...+... +.+.|..++..+.. ...+.|.++.+.+.+.|+|.|.|.
T Consensus 296 g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~~---------------------~~~l~i~~v~~~d~G~Y~C~a~~~ 350 (363)
T 1wio_A 296 QLQKNLTCEVWGPTSPKLMLSLKLENKEAKV---------------------SKREKAVWVLNPEAGMWQCLLSDS 350 (363)
T ss_dssp CCSSSEEEEEESSCCTTCCEEEECSSSSCSE---------------------EESSSEEEESSCCSEEEEEEECSS
T ss_pred CCCeeEEEEEccccCCCccEEEEeCCCceee---------------------eeeeeeeeeccccceeEEEEEecC
Confidence 666777766554433 34777765433321 134567889999999999999975
No 137
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.45 E-value=2.5e-13 Score=118.38 Aligned_cols=113 Identities=24% Similarity=0.356 Sum_probs=91.3
Q ss_pred CCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEe-c-CcceE
Q psy8771 700 EGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTL-K-NQTSF 777 (904)
Q Consensus 700 ~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~-~-~~~~~ 777 (904)
.+..+....++|.+.+|. +|.++.+...+.+++.|+|++|.. +|.+.+|.|+|+..+...+ ....+ . ..+.+
T Consensus 2 ss~~~~~~~~~t~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~~---~g~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~~ 75 (118)
T 2yrz_A 2 SSGSSGSHDSRLTAGVPD-TPTRLVFSALGPTSLRVSWQEPRC---ERPLQGYSVEYQLLNGGEL--HRLNIPNPAQTSV 75 (118)
T ss_dssp CCCCCSCCTTSSSCSCCC-CCCCCEECCCBTTEEEEECCCCCC---SSCEEEEEEEEEBSSSCCE--EEEEESCTTCCEE
T ss_pred CCCCCCcceeecCCCCCC-CCCceEEEeCCCCEEEEEeCCCCC---CCCccEEEEEEEECCCCce--EEEEcCCCCcCEE
Confidence 344555677889998887 689999999999999999999953 3789999999998665333 22333 2 68999
Q ss_pred EecCCCCCceEEEEEEEeeCCCCCCCCC-cEEeecCCCCCCC
Q psy8771 778 VLDELKKWTEYRIWVLAGTSIGDGPSSY-PITIRTHEDDPSE 818 (904)
Q Consensus 778 ~i~~L~p~t~Y~~~V~a~~~~g~g~~s~-~~~~~t~~~~P~~ 818 (904)
+|.+|+|++.|.|+|+|.|..|.|.+|. .+.+.|.+.+|++
T Consensus 76 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~~~ps~ 117 (118)
T 2yrz_A 76 VVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVSGPSS 117 (118)
T ss_dssp EEESCCTTCEEEEEEEEEESSCEEEEEEEEEECCCSCCCCCC
T ss_pred EeCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCCCCCCCCC
Confidence 9999999999999999999999999987 6777777777753
No 138
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.45 E-value=5.7e-13 Score=113.90 Aligned_cols=101 Identities=21% Similarity=0.346 Sum_probs=83.3
Q ss_pred EecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccC-CCCccEEEEecCcceEEecCCCCCceE
Q psy8771 710 RTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGR-SDSEASIVTLKNQTSFVLDELKKWTEY 788 (904)
Q Consensus 710 ~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~-~~~~~~~~~~~~~~~~~i~~L~p~t~Y 788 (904)
+|.+.+|. +|.+|++..++.++|.|+|++|. ..+|.+.+|.|+|+..+. ........ ....+.++|.+|+|++.|
T Consensus 2 tT~~~~P~-~p~~l~~~~~~~~sv~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y 77 (109)
T 2e7h_A 2 SSGSSGPP-AVSDIRVTRSSPSSLSLAWAVPR--APSGAVLDYEVKYHEKGAEGPSSVRFL-KTSENRAELRGLKRGASY 77 (109)
T ss_dssp CSSCCSSC-CCCCCEEEEEETTEEEEECCCCC--CSSSCCCEEEEEEEETTCCSTTTSEEE-EESSSEEEEESCCTTSCE
T ss_pred CCCCCCCC-CCCccEEEecCCCEEEEEeCCCC--CCCCcEeEEEEEEEECCCCCCceeEEE-ccCCCEEEECCCCCCCeE
Confidence 46666777 48899999999999999999994 678999999999998762 22222222 126679999999999999
Q ss_pred EEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771 789 RIWVLAGTSIGDGPSSYPITIRTHED 814 (904)
Q Consensus 789 ~~~V~a~~~~g~g~~s~~~~~~t~~~ 814 (904)
.|+|+|.|..|.|++|..+.++|.+.
T Consensus 78 ~~~V~A~n~~G~g~~S~~~~~~T~~~ 103 (109)
T 2e7h_A 78 LVQVRARSEAGYGPFGQEHHSQTQLD 103 (109)
T ss_dssp EEEEEEECSSCBCCCCSCEECCCCCC
T ss_pred EEEEEEEeCCccCCCCCCEEEEcCCC
Confidence 99999999999999999999999764
No 139
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.45 E-value=5.8e-13 Score=117.47 Aligned_cols=114 Identities=23% Similarity=0.390 Sum_probs=94.2
Q ss_pred CCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCC--CCCceeeEEEEEEeCCCCCCcce------EEEeecCceE
Q psy8771 469 TPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPET--PNGQITGYKVYYTQDQSLPMSAW------ETQVVDNNQL 540 (904)
Q Consensus 469 s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~------~~~~~~~~~~ 540 (904)
|..+.++|....|+.+|.++++...+.+++.|+|++|.. .+|.+.+|.|+|+.........| ........+.
T Consensus 2 S~~v~~~T~~~~P~~~P~~l~~~~~~~~sv~l~W~~p~~~~~~g~i~gY~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (125)
T 1uen_A 2 SSGSSGHSGEDLPMVAPGNVRVNVVNSTLAEVHWDPVPLKSIRGHLQGYRIYYWKTQSSSKRNRRHIEKKILTFQGSKTH 81 (125)
T ss_dssp CCCCCCCSCCCCCCCCCSSCEEEEEETTEEEEECCCCCHHHHCSCEEEEEEEEEEESCCCCSTTCCCCEEEEEEESSCSE
T ss_pred CccEEEECCCCCCCCCCceeEEEecCCcEEEEEEcCCCchhcCceEeEEEEEEEECCCCcccccccccceEEEecCCccE
Confidence 455777888888888999999999999999999999843 56789999999988764433222 2233467788
Q ss_pred EEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCC
Q psy8771 541 TTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQ 582 (904)
Q Consensus 541 ~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~ 582 (904)
+.|.+|.|++.|.|+|+|+|..|.|++|..+.++|..+.|..
T Consensus 82 ~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~~ 123 (125)
T 1uen_A 82 GMLPGLEPFSHYTLNVRVVNGKGEGPASPDRVFNTPEGSGPS 123 (125)
T ss_dssp EEEESCCSSCEEEEEEEEEESSCEEEECCCEEEECCCCCSSC
T ss_pred EEeCCCCCCCEEEEEEEEecCCCCCCCCCCEEEECCCCCCCC
Confidence 999999999999999999999999999999999998877754
No 140
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.45 E-value=7.3e-13 Score=115.00 Aligned_cols=111 Identities=26% Similarity=0.416 Sum_probs=90.3
Q ss_pred CCCCCcEEEecCC--CCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEecc
Q psy8771 565 GPLSAPVLVKTQQ--GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWS 642 (904)
Q Consensus 565 ~~~S~~~~~~t~~--~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~ 642 (904)
|++|..+.++|.. ..|.+|.++++...+.+++.|+|.++..
T Consensus 1 G~~S~~~~~~T~~~~~~P~~P~~l~~~~~~~~si~l~W~~p~~------------------------------------- 43 (116)
T 1x5g_A 1 GSSGSSGRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVS------------------------------------- 43 (116)
T ss_dssp CCCCCCCCCSSCCCSSCCCCCSSCEEEEEETTEEEEECCCCSC-------------------------------------
T ss_pred CCCccCeEEEcCCCCCCCcCCCccEEEecCCCEEEEEEeCCCC-------------------------------------
Confidence 3567777777742 5778889999988888999999998864
Q ss_pred CCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC
Q psy8771 643 KPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG 717 (904)
Q Consensus 643 ~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~ 717 (904)
.++.+.+|.|+|+..+...+... ......+.|.+|+|++.|.|+|+|+|..|.|.+|..+.++|...+|.
T Consensus 44 ----~~~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~ 113 (116)
T 1x5g_A 44 ----GNGEIQNYKLYYMEKGTDKEQDV-DVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDSGP 113 (116)
T ss_dssp ----CSSCCSEEEEEEEETTCCCCCCE-EECSSEEEECSCCTTCEEEEEEEEECSSCCCCBCCCCCEECCCSSCC
T ss_pred ----CCCcccEEEEEEEECCCCccEEE-ecCCceEEEcCCCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCCCCC
Confidence 45678888888888765544322 33467999999999999999999999999999999999999988776
No 141
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.44 E-value=4e-12 Score=121.91 Aligned_cols=164 Identities=16% Similarity=0.192 Sum_probs=110.7
Q ss_pred CCCeEEcCCCCceEEec-CCCeEEEEEEccCCC--CeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771 103 VPPQFSIPPPALLEVML-DSPLNLSCVAVGSPM--PFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS 177 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~-g~~~~l~C~~~g~p~--p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n 177 (904)
.||.|...+. ..+.+ |+++.|.|.+.|.|. +.|.|+|+ +..+....+.. .++.|.|.++ +|+|.|+|.|.|
T Consensus 2 ~~P~i~~~~~--~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~-~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~C~~~n 77 (190)
T 2wv3_A 2 NEPRIVTSEE--VIIRDSLLPVTLQCNLTSSSHTLMYSYWTKN-GVELTATRKNA-SNMEYRINKPRAEDSGEYHCVYHF 77 (190)
T ss_dssp -CCEEEECCC--EECCCSSSCEEEEEEEEECSSCEEEEEEEET-TEECTTCCBCC-SEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCcccccce--EEEccCCceEEEEEEeccCCCCceEEEEEEC-CEECcccceEe-ccEEEEEecCCcccCEEEEEEEEe
Confidence 3788877554 66666 999999999999987 88999999 66666544333 6789999999 699999999999
Q ss_pred cCcceEEEEEEEEEeecCCCCCCCC---CCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCC-------CCCCeEEe
Q psy8771 178 VLGVIETSTIVKVQCKYAPLLTLPV---APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKA-------ANTPYSEI 247 (904)
Q Consensus 178 ~~g~~~~~~~l~v~~~~~~~~~~P~---~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~-------~~~~~~~~ 247 (904)
. |.....+.|.|. ..|. .+....+ .....+.|.+...+.+...+.+.....+ ....+...
T Consensus 78 ~-~~~~~~~~l~V~-------~~p~~~~~~~~~~~--~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~ 147 (190)
T 2wv3_A 78 V-SAPKANATIEVK-------AAPDITGHKRSENK--NEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFII 147 (190)
T ss_dssp T-TEEEEEEEEEEE-------CCCEEEEECSEEEE--ETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEE
T ss_pred C-CcccccEEEEEe-------cCCcccccCCccee--eCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEe
Confidence 9 888888888888 3221 1222222 2334455555543222222222221111 12233333
Q ss_pred ecceeceEEEcCCC-CCCeEEEEEEEEcCCCCCC
Q psy8771 248 SGIITTYYTVRNLS-PYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 248 ~~~~~~~~~i~~L~-p~~~Y~~~v~a~n~~g~s~ 280 (904)
.......+.|.++. ..+.+.|+|.|.|..|...
T Consensus 148 ~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g~~~ 181 (190)
T 2wv3_A 148 NKENYTELNIVNLQITEDPGEYECNATNSIGSAS 181 (190)
T ss_dssp ECSSEEEEEECSCCTTTSCEEEEEEEECSSCEEE
T ss_pred cCCCeeEEEEEeccccCCCEEEEEEEEecCCcce
Confidence 33334579999999 7999999999999988643
No 142
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=8.9e-13 Score=115.09 Aligned_cols=106 Identities=25% Similarity=0.457 Sum_probs=87.0
Q ss_pred eeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCC
Q psy8771 707 IPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKW 785 (904)
Q Consensus 707 ~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~ 785 (904)
..+.+...+|. +|.++.+...+.+++.|+|++|. ..++.+.+|.|+|+..+...+. ...... ..+.+.|.+|+|+
T Consensus 9 ~~~~~~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~ 84 (119)
T 2ed7_A 9 PAIPSSSVLPS-APRDVVPVLVSSRFVRLSWRPPA--EAKGNIQTFTVFFSREGDNRER-ALNTTQPGSLQLTVGNLKPE 84 (119)
T ss_dssp SSCCCSSSSCC-CCSCCEEEEECSSCEEEECCCCS--CCSSCEEEEEEEEEESSCCCCE-EEECCCTTCCEEEECSCCSS
T ss_pred ccCCCCCCCCc-CCcceEEEecCCCEEEEEEeCCC--CCCCcEEEEEEEEEeCCCCcce-eeEeecCCceEEEeCCCCCC
Confidence 34556777775 78999999999999999999984 5688999999999987654432 222222 7889999999999
Q ss_pred ceEEEEEEEeeCCCCCCCCCcEEeecCCCCC
Q psy8771 786 TEYRIWVLAGTSIGDGPSSYPITIRTHEDDP 816 (904)
Q Consensus 786 t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P 816 (904)
+.|.|+|+|.|..|.|.+|+.+.++|.+..|
T Consensus 85 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ed7_A 85 AMYTFRVVAYNEWGPGESSQPIKVATQPESG 115 (119)
T ss_dssp SEEEECCEEEESSCBCSCCCCEEEECCCCSC
T ss_pred CEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 9999999999999999999999999976543
No 143
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.44 E-value=4e-13 Score=117.18 Aligned_cols=105 Identities=30% Similarity=0.474 Sum_probs=89.7
Q ss_pred CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceE
Q psy8771 699 GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSF 777 (904)
Q Consensus 699 G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~ 777 (904)
|.|.+|..+.++|.+.+|. +|.++++...+.+++.|+|++|. ..+|.+.+|.|+|+..+.... .....+. ..+.+
T Consensus 1 G~g~~S~~~~~~T~~~~P~-~P~~l~~~~~~~~sv~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~~~ 76 (119)
T 1wfn_A 1 GSSGSSGPQLVRTHEDVPG-PVGHLSFSEILDTSLKVSWQEPG--EKNGILTGYRISWEEYNRTNT-RVTHYLPNVTLEY 76 (119)
T ss_dssp CCCCCSCCCSCCSSCCSCC-CCSCCEEESCCSSEEEEECCCCT--TCCSCCCEEEEEEEESSCGGG-CCCEEECSSCCEE
T ss_pred CCCCCCCCEEEECCCCCCC-CCCceEEEECCCCEEEEEEcCCC--CCCCcEEEEEEEEEECCCCCc-eEEEEeCCCceEE
Confidence 6788899999999999887 57899999999999999999984 678999999999998764322 1223444 88899
Q ss_pred EecCCCCCceEEEEEEEeeCCCCCCCCCcE
Q psy8771 778 VLDELKKWTEYRIWVLAGTSIGDGPSSYPI 807 (904)
Q Consensus 778 ~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~ 807 (904)
+|.+|++++.|.|+|+|.|..|.|.+|..+
T Consensus 77 ~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 77 RVTGLTALTTYTIEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp EEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred EEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 999999999999999999999999998866
No 144
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.44 E-value=1.4e-12 Score=113.27 Aligned_cols=113 Identities=24% Similarity=0.391 Sum_probs=92.1
Q ss_pred CCCCCceeeec-CCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcC
Q psy8771 467 ATTPPIPVRTK-QYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISD 545 (904)
Q Consensus 467 ~~s~~~~~~t~-~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (904)
..|..+.++|. ...+|.+|.++.+...+.+++.|+|++|...++.+.+|.|+|+..+... |.. .....+.+.|.+
T Consensus 2 ~~S~~~~~~T~~~~~~P~~P~~l~~~~~~~~si~l~W~~p~~~~~~i~~Y~v~~~~~~~~~---~~~-~~~~~~~~~i~~ 77 (116)
T 1x5g_A 2 SSGSSGRVETQPEVQLPGPAPNLRAYAASPTSITVTWETPVSGNGEIQNYKLYYMEKGTDK---EQD-VDVSSHSYTING 77 (116)
T ss_dssp CCCCCCCCSSCCCSSCCCCCSSCEEEEEETTEEEEECCCCSCCSSCCSEEEEEEEETTCCC---CCC-EEECSSEEEECS
T ss_pred CCccCeEEEcCCCCCCCcCCCccEEEecCCCEEEEEEeCCCCCCCcccEEEEEEEECCCCc---cEE-EecCCceEEEcC
Confidence 45666777774 2234578999999999999999999999877789999999999876432 222 234577899999
Q ss_pred CCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCCCCC
Q psy8771 546 LTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583 (904)
Q Consensus 546 L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p 583 (904)
|.|++.|.|+|+|+|..|.|.+|..+.++|....|.++
T Consensus 78 L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~p~ 115 (116)
T 1x5g_A 78 LKKYTEYSFRVVAYNKHGPGVSTPDVAVRTLSDSGPSS 115 (116)
T ss_dssp CCTTCEEEEEEEEECSSCCCCBCCCCCEECCCSSCCCC
T ss_pred CCCCCEEEEEEEEEcCCCcCCCCCCEEEECCCCCCCCC
Confidence 99999999999999999999999999999988777654
No 145
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.44 E-value=1.2e-12 Score=111.86 Aligned_cols=101 Identities=23% Similarity=0.318 Sum_probs=85.2
Q ss_pred EecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceE
Q psy8771 710 RTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEY 788 (904)
Q Consensus 710 ~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y 788 (904)
+|.+.+|. +|.+|++...+.+++.|+|++| ...+|.+.+|.|+|+..+...+.. ..+. ..+.+.|.+|.|++.|
T Consensus 2 tT~~~~P~-~P~~l~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~t~Y 76 (108)
T 2djs_A 2 SSGSSGPS-TVPIMHQVSATMRSITLSWPQP--EQPNGIILDYEIRYYEKEHNEFNS--SMARSQTNTARIDGLRPGMVY 76 (108)
T ss_dssp CSCCCCCC-CCSCCEEEEECSSEEEEECCCC--SCCSSCEEEEEEEEEETTSCSTTC--EEEEESSSEEEEESCCTTCEE
T ss_pred ccCCCCCC-CCcceEEEecCCCEEEEEECCC--CCCCCeEEEEEEEEEECCCCCcce--eEEecCccEEEEcCCCCCCEE
Confidence 36667777 6889999999999999999999 467899999999999876543322 2333 7899999999999999
Q ss_pred EEEEEEeeCCCCCCCCCcEEeecCCCC
Q psy8771 789 RIWVLAGTSIGDGPSSYPITIRTHEDD 815 (904)
Q Consensus 789 ~~~V~a~~~~g~g~~s~~~~~~t~~~~ 815 (904)
.|+|+|.|..|.|++|.++.++|.++.
T Consensus 77 ~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 77 VVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 999999999999999999999997654
No 146
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.44 E-value=5.4e-13 Score=128.57 Aligned_cols=170 Identities=18% Similarity=0.260 Sum_probs=114.3
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC----ceee--cceEEEEeee--cCCeEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD----KLPV--GRNVLTLDRV--TESENYTC 173 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~----~~~~--~~~~l~i~~l--~d~g~Y~c 173 (904)
..||.|...|.. +.+.+|++++|.|.+.|.|.+.|.|+|+ +..+.... ++.. +...|.|.++ +|+|.|+|
T Consensus 3 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 80 (194)
T 2a38_A 3 TQAPTFTQPLQS-VVVLEGSTATFEAHISGFPVPEVSWFRD-GQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSL 80 (194)
T ss_dssp CEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEES-SSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CCCCeEEccCCc-eEEECCCEEEEEEEEEecCCCEEEEEEC-CEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEE
Confidence 467889998888 9999999999999999999999999999 66665432 2222 3458999999 69999999
Q ss_pred EEEecCcceEEEEEEEEEeecC-CCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEee
Q psy8771 174 IAASVLGVIETSTIVKVQCKYA-PLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEIS 248 (904)
Q Consensus 174 ~a~n~~g~~~~~~~l~v~~~~~-~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~ 248 (904)
.+.|..|.......|.|..... |... ..+....+ .....+.|.+...+.+... +.|...+. ...+....
T Consensus 81 ~~~n~~~~~~~~~~l~v~~~~~~p~~~--~~~~~~~~--~~g~~~~l~C~~~g~p~~~--v~W~~~~~~~~~~~~~~~~~ 154 (194)
T 2a38_A 81 KATNGSGQATSTAELLVKAETAPPNFV--QRLQSMTV--RQGSQVRLQVRVTGIPTPV--VKFYRDGAEIQSSLDFQISQ 154 (194)
T ss_dssp EEEETTEEEEEEEEEEEECCCEEEEEE--ECCCCEEE--CTTEEEEEEEEEEEESCCE--EEEEETTEECCCSSSEEEEE
T ss_pred EEEcCCceEeEEEEEEEccCCCCCEEE--eCCccEEE--cCCCEEEEEEEEEEecCCe--EEEEECCEECCCCCcEEEEE
Confidence 9999999888888888872100 0000 11222222 2233455555543222222 33433321 22233223
Q ss_pred cceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 249 GIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 249 ~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
......+.|.++.+.+.+.|+|.|.|..|..
T Consensus 155 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 185 (194)
T 2a38_A 155 EGDLYSLLIAEAYPEDSGTYSVNATNSVGRA 185 (194)
T ss_dssp ETTEEEEEEEEECGGGCEEEEEEEEETTEEE
T ss_pred cCCEEEEEECCCChhcCeEEEEEEEeCCCce
Confidence 3333579999999999999999999998864
No 147
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.44 E-value=3.2e-12 Score=144.59 Aligned_cols=307 Identities=10% Similarity=0.018 Sum_probs=173.5
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEc
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSI 109 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~ 109 (904)
....|.|...+ .|.|.+.... ++.++.......+.....|...+ |....+.+.|. .||.+..
T Consensus 52 ~~v~l~C~~~~----~v~W~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n---g~~~~~~l~V~-----~p~~~~~ 119 (524)
T 2ec8_A 52 DEIRLLCTDPG----FVKWTFEILDETNENKQNEWITEKAEATNTGKYTCTNKH---GLSNSIYVFVR-----DPAKLFL 119 (524)
T ss_dssp SCEEEEEECTT----EEEEEEESSSCCEEECSSEEEESSCCSTTCEEEEEEETT---SCEEEEEEECC-----CSSCSBC
T ss_pred CeEEEEEeCCc----eEEEcCCCccccccCccceEEEcccchhhCEEEEEeecC---CcceEEEEEEC-----CCCcccc
Confidence 45555555543 8999876432 33355444555555555555544 55555566653 4455555
Q ss_pred CCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-cceEEEEeee--cCCe-EEEEEEEecCcceE-E
Q psy8771 110 PPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESE-NYTCIAASVLGVIE-T 184 (904)
Q Consensus 110 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g-~Y~c~a~n~~g~~~-~ 184 (904)
.+.+ +.+.+|+.+.|.|.+.|.|.+.|+|++.++..+..+.++.. .++.|.|.++ +|+| .|+|.|.|..|... .
T Consensus 120 ~~~~-~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~ 198 (524)
T 2ec8_A 120 VDRS-LYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSE 198 (524)
T ss_dssp CCCC-CCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCC
T ss_pred cccc-eEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEEEEECCceEEEE
Confidence 6666 88999999999999999888999998833777777777765 5778999999 6999 99999999877653 3
Q ss_pred EEEEEEEee--cCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC--CCeEE---e----ecceec
Q psy8771 185 STIVKVQCK--YAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN--TPYSE---I----SGIITT 253 (904)
Q Consensus 185 ~~~l~v~~~--~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~--~~~~~---~----~~~~~~ 253 (904)
.+.|.|... ..|.+. ..|....+ .....++|.+...+.+.. ..+.|...+.. ..... . ......
T Consensus 199 ~~~l~V~~~~~~~p~i~--~~~~~~~v--~~G~~v~L~C~~~g~p~p-~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (524)
T 2ec8_A 199 KFILKVRPAFKAVPVVS--VSKASYLL--REGEEFTVTCTIKDVSSS-VYSTWKRENSQTKLQEKYNSWHHGDFNYERQA 273 (524)
T ss_dssp CEECCEECCCCSCCEEE--CSCSEEEE--ETTSCEEEEEEEEESSTT-CEEEEEETTCSCCCCEEEEEEECSSSCEEEEE
T ss_pred EEEEEEEeCCCCCCcEE--ecCCcceE--EcCCcEEEEEEEecCCCc-EEEEEEeCCCCCccccccccccccCCccceEE
Confidence 667777510 001110 12233323 233455555554322211 12444444333 11111 1 123347
Q ss_pred eEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCC--CCCCCceEecccCCCeeEEEecCCCCCCce-eeEEEE
Q psy8771 254 YYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEP--GTAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITAKHH 330 (904)
Q Consensus 254 ~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p--~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~-~~~~~~ 330 (904)
.+.|.++...+.+.|+|.|.|..|.......+.+...+... +..+....+. ....+.|.+.....+... +.++..
T Consensus 274 ~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~--~G~~v~l~C~~~g~P~p~~v~W~k~ 351 (524)
T 2ec8_A 274 TLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVN--DGENVDLIVEYEAFPKPEHQQWIYM 351 (524)
T ss_dssp EEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEEC--TTCCEEEEEEEEEESCCCEEEEESS
T ss_pred EEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEc--CCCcEEEEEEEeecCCCcEEEEEEC
Confidence 89999999999999999999988865432223332111100 0011122222 223344444322222222 332211
Q ss_pred -------------Eeec----eeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771 331 -------------RRIG----LVETYSLTGLYPNTLYYIWLAAQSPRGE 362 (904)
Q Consensus 331 -------------~~~~----~~~~~~~~~L~~~~~Y~v~v~a~~~~g~ 362 (904)
.... ....+.|..+.....-.+++.|.|..|.
T Consensus 352 g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 400 (524)
T 2ec8_A 352 NRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVN 400 (524)
T ss_dssp SCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCE
T ss_pred CeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCce
Confidence 0000 2357888888888888888999887764
No 148
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=99.43 E-value=1.1e-12 Score=129.17 Aligned_cols=187 Identities=18% Similarity=0.186 Sum_probs=126.5
Q ss_pred CCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEe
Q psy8771 581 SQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWND 660 (904)
Q Consensus 581 ~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~ 660 (904)
.+|.+|.+...+...+.++|.++.. .++...+|.+.|+.
T Consensus 22 ~~P~nl~C~~~~~~~l~C~W~~~~~-----------------------------------------~~~~~~~y~l~y~~ 60 (227)
T 1eer_B 22 RGPEELLCFTERLEDLVCFWEEAAS-----------------------------------------AGVGPGQYSFSYQL 60 (227)
T ss_dssp HSTTSCEEEBSSSSCCEEEEEESCC-----------------------------------------SSCCTTSEEEEEEE
T ss_pred cCCcCCeEECCCCCEEEEEecCCCC-----------------------------------------CCCCCccEEEEEEc
Confidence 3688999888888889999998754 22345677777776
Q ss_pred CCcccc-c--eEEe----cccceEEE--eCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecC-C
Q psy8771 661 TYAKAK-H--HRRI----GLVETYSL--TGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLS-S 730 (904)
Q Consensus 661 ~~~~~~-~--~~~~----~~~~~~~l--~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~-~ 730 (904)
.+.... . .... .....+.+ .++..++.|.|+|.|.+.. +.. ...+.....++..||.+|++...+ .
T Consensus 61 ~~~~~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~~~V~a~~~~--~~~--~~~~~~~~~v~p~pP~~l~~~~~~~~ 136 (227)
T 1eer_B 61 EDEPWKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLELRVTAASGA--PRY--HRVIHINEVVLLDAPVGLVARLADES 136 (227)
T ss_dssp TTSCCEEECEEEEEETTTEEEEEEECCGGGCCBSSCEEEEEEETTSC--EEE--EEEECGGGSEECCCCEEEEEEECSST
T ss_pred CCCCceeccceeccCCCCCceEEEEeCCCcceeeEEEEEEEEecCCC--ccE--EEEEEeeeeEccCcCcceEEEEcCCC
Confidence 432210 0 0000 11233444 5778899999999996532 211 233444444455689999998874 7
Q ss_pred CEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEeeCC----C-CCCCCC
Q psy8771 731 TSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSI----G-DGPSSY 805 (904)
Q Consensus 731 ~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~----g-~g~~s~ 805 (904)
+.+.|+|++|.... ...+..|+|+|+..++..+..........+.+.|.+|++++.|.|+|+|.... | .|.+|.
T Consensus 137 ~~l~v~W~~P~~~~-~~~~l~Yev~y~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~ 215 (227)
T 1eer_B 137 GHVVLRWLPPPETP-MTSHIRYEVDVSAGQGAGSVQRVEILEGRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSE 215 (227)
T ss_dssp TCEEEEEECCSSCS-CGGGEEEEEEEECCSSSCCCCEEEECTTCCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCC
T ss_pred CeEEEEEcCCCCcc-cccceEEEEEEEcCCCCCcEEEEEEecCceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCC
Confidence 99999999996322 22378999999977654443322223377899999999999999999999742 3 388999
Q ss_pred cEEeecCC
Q psy8771 806 PITIRTHE 813 (904)
Q Consensus 806 ~~~~~t~~ 813 (904)
++.+.|..
T Consensus 216 ~~~~~t~~ 223 (227)
T 1eer_B 216 PVSLLTPS 223 (227)
T ss_dssp CEEEEC--
T ss_pred CEEEECcc
Confidence 99999844
No 149
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.43 E-value=3e-12 Score=132.41 Aligned_cols=231 Identities=16% Similarity=0.208 Sum_probs=139.6
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC----CC-----------ceecccccccccceEEEEeeeccCCe-eeeeeeeccCC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP----NG-----------QITHPPTRAARSHARLAAQSVLRRGR-LAHAVRQVADP 99 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~----~g-----------~i~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~ 99 (904)
....|.|...+.+. .+.|.+.... +. .+........|.....|...+..... .....+.+
T Consensus 20 ~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v--- 95 (291)
T 2wim_A 20 ESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEI--- 95 (291)
T ss_dssp CCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEE---
T ss_pred CcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEe---
Confidence 56666776666654 8999874211 11 12222333344444445444432222 22334443
Q ss_pred CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC--CCCceee-cceEEEEeee--cCCeEEEEE
Q psy8771 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT--PDDKLPV-GRNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~--~~~~~~~-~~~~l~i~~l--~d~g~Y~c~ 174 (904)
..+|.+...+.. ..+.+|+.+.|.|.+.|.|.+.|.|+++ +..+. ...++.. .++.|.|.++ +|+|.|+|.
T Consensus 96 --~~~~~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 171 (291)
T 2wim_A 96 --YQKLTFREVVSP-QEFKQGEDAEVVCRVSSSPAPAVSWLYH-NEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCE 171 (291)
T ss_dssp --ECCCBCCSCCCS-EEEETTSCEEECCCCBCSSCCEEEEECC-----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEE
T ss_pred --cCCcceEeCCCC-hhhcCCCCEEEEEEEccCCCCEEEEEEC-CccccccCCceEEEccCCCEEEEecchhhCEEEEEE
Confidence 456777777777 8899999999999999999999999999 55443 2344443 5778999998 699999999
Q ss_pred EEecCcceEE--EEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEee
Q psy8771 175 AASVLGVIET--STIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEIS 248 (904)
Q Consensus 175 a~n~~g~~~~--~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~ 248 (904)
|.|..+.... ...+.+. ..|....+..+. .........+.|.+...+.+... +.|...+. ...+. .
T Consensus 172 ~~n~~~~~~~~~~~~~~v~--~~p~~~~~~~~~--~~~~~~g~~~~l~C~~~g~p~p~--v~W~~~g~~~~~~~~~~-~- 243 (291)
T 2wim_A 172 GRVEARGEIDFRDIIVIVN--VPPAISMPQKSF--NATAERGEEMTFSCRASGSPEPA--ISWFRNGKLIEENEKYI-L- 243 (291)
T ss_dssp EEETTTTEEEEEEEEEEEE--BCCCCBCSCSEE--ECCSSSCCEEEEECBCCCBSCCE--EEEEETTEECCCTTTEE-E-
T ss_pred EEECCCCeeEEeeEEEEec--cCCccccCcccc--cceecCCCeEEEEEEeecCCCCe--EEEEECCEECcCCccEE-E-
Confidence 9998865443 3444444 322222221111 11223345677777766444333 44443321 11111 1
Q ss_pred cceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCC
Q psy8771 249 GIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPS 282 (904)
Q Consensus 249 ~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s 282 (904)
......+.|.++...+.+.|+|.|.|..|....+
T Consensus 244 ~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~ 277 (291)
T 2wim_A 244 KGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQ 277 (291)
T ss_dssp CSTTCEEEEESCCSTTCEEEEEEEEETTEEEEEE
T ss_pred cCCccEEEEeeCCcccCEEEEEEEEECCCceeee
Confidence 1223679999999999999999999999976433
No 150
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.43 E-value=1.2e-12 Score=125.79 Aligned_cols=166 Identities=16% Similarity=0.234 Sum_probs=113.9
Q ss_pred CCeEEcCCCC-ceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--cceEEEEeee--cCCeEEEEEEEec
Q psy8771 104 PPQFSIPPPA-LLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--GRNVLTLDRV--TESENYTCIAASV 178 (904)
Q Consensus 104 ~P~~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n~ 178 (904)
||.|...+.. .+.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+....++.. +...|.|.++ +|+|.|+|.+.|.
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 80 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRN-GKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNK 80 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEET-TEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEET
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEEC-CeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEcc
Confidence 6777765541 27889999999999999999999999999 777776666654 4568999999 6999999999999
Q ss_pred CcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC-----------CCCeEEe
Q psy8771 179 LGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA-----------NTPYSEI 247 (904)
Q Consensus 179 ~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~-----------~~~~~~~ 247 (904)
.|.......|.|.... .... +....+ .....++|.+...+.+... +.|...+. ...+...
T Consensus 81 ~~~~~~~~~l~V~~~p--~~~~---~~~~~~--~~g~~v~l~C~~~~~p~~~--v~W~~~~~~~~~~~~~~~~~~~~~~~ 151 (192)
T 2va4_A 81 AGEDEKQAFLQVFVQP--HIIQ---LKNETT--YENGQVTLVCDAEGEPIPE--ITWKRAVDGFTFTEGDKSLDGRIEVK 151 (192)
T ss_dssp TEEEEEEEEEEEEEEE--EEEE---ECCEEE--CTTSEEEEEEEEEEESCCE--EEEEETTTTEEECTTCBCTTSCEEEE
T ss_pred ccccceEEEEEEEccC--cccc---cCcceE--EeCCeEEEEEEecCCCCCc--EEEEeCCCCceeeccccccCCcEEEe
Confidence 9988888888887221 1110 111112 2245666666654222222 34433211 1122222
Q ss_pred ecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 248 SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 248 ~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
.......+.|.++...+.+.|+|.|.|..|..
T Consensus 152 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 183 (192)
T 2va4_A 152 GQHGSSSLHIKDVKLSDSGRYDCEAASRIGGH 183 (192)
T ss_dssp EETTEEEEEEESCCGGGCEEEEEEEECSSCEE
T ss_pred eccCceEEEEecCCcccCEEEEEEEEecCCce
Confidence 22234679999999999999999999998863
No 151
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.43 E-value=1.8e-12 Score=134.14 Aligned_cols=231 Identities=15% Similarity=0.144 Sum_probs=137.8
Q ss_pred CCCCcEEEeccCC-ceEEEEeCCCC-----CCC------------ceecccccccccceEEEEeeeccCCe-eeeeeeec
Q psy8771 36 APRDVQVRPLSSS-TMVIQWDEPET-----PNG------------QITHPPTRAARSHARLAAQSVLRRGR-LAHAVRQV 96 (904)
Q Consensus 36 ~p~~l~~~~~~~~-s~~v~W~~~~~-----~~g------------~i~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v 96 (904)
....|.|...+.+ .+.|.|.+... ..+ .+........|.....|...+...+. ...+.+.+
T Consensus 18 ~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v 97 (291)
T 1qz1_A 18 ESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKI 97 (291)
T ss_dssp CCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred CeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEEe
Confidence 4556666665654 68999987311 111 12222333444444555555444332 22333443
Q ss_pred cCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC--CCcee-ecceEEEEeee--cCCeEE
Q psy8771 97 ADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP--DDKLP-VGRNVLTLDRV--TESENY 171 (904)
Q Consensus 97 ~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~--~~~~~-~~~~~l~i~~l--~d~g~Y 171 (904)
..+|.+...|.. ..+.+|+.+.|.|.+.|.|.|.|.|+++ +..+.. ..++. ..++.|.|.++ +|+|.|
T Consensus 98 -----~~~~~~~~~~~~-~~~~~g~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 170 (291)
T 1qz1_A 98 -----FQKLMFKNAPTP-QEFKEGEDAVIVCDVVSSLPPTIIWKHK-GRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTY 170 (291)
T ss_dssp -----ECCSEEEECCSS-EEEETTSCEEECCEEECSSCCEEEEEET-TSCSSTTCCTTEEECTTSCEEETTCCGGGCEEE
T ss_pred -----eccccccCCCCc-ccccCCCeEEEEEEeccCCCCEEEEEEC-CEEcccCCCceEEEccCCcEEEccCccccCeEE
Confidence 467888888887 8999999999999999999999999999 554432 33443 46778999999 699999
Q ss_pred EEEEEecCcceE--EEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCC------
Q psy8771 172 TCIAASVLGVIE--TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTP------ 243 (904)
Q Consensus 172 ~c~a~n~~g~~~--~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~------ 243 (904)
+|.|.|..+... ....|.|. ..|.......+.+. .......++|.+...+.+... +.|...+....
T Consensus 171 ~C~a~n~~~~~~~~~~~~l~v~--~~p~~~~~~~~~~~--~~~~g~~v~l~C~~~g~p~p~--i~W~~~g~~~~~~~~~~ 244 (291)
T 1qz1_A 171 RCEGRILARGEINFKDIQVIVN--VPPTVQARQSIVNA--TANLGQSVTLVCDADGFPEPT--MSWTKDGEPIENEEEDD 244 (291)
T ss_dssp EEEEEEGGGTEEEEEEEEEEEE--EEEEEEESCSEEEE--ETTSCCCEEEEEEEEEESCCE--EEEEETTEECCCC--CC
T ss_pred EEEEEecCCCceeeEEEEEEEe--cCCccccccccccc--ccccCceEEEEEEEEEeCCCc--EEEEECCEECcCCCCCC
Confidence 999999775433 34455554 22211111111111 112234455555543222222 33333221100
Q ss_pred eEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 244 YSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 244 ~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
...........+.|.++...+.+.|+|.|.|..|..
T Consensus 245 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~ 280 (291)
T 1qz1_A 245 EKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQ 280 (291)
T ss_dssp SSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred cceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCce
Confidence 011111223679999999999999999999998864
No 152
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.43 E-value=1.4e-12 Score=110.67 Aligned_cols=102 Identities=22% Similarity=0.334 Sum_probs=78.1
Q ss_pred cCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeE
Q psy8771 575 TQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISY 654 (904)
Q Consensus 575 t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y 654 (904)
|...+|.+|.++++..++.+++.|+|.++.+ ++..+.+|
T Consensus 3 t~~~~P~~P~~~~~~~~s~~sv~l~W~~p~~-----------------------------------------~g~~i~~Y 41 (106)
T 1x4x_A 3 SGSSGPDQCKPPQVTCRSATCAQVNWEVPLS-----------------------------------------NGTDVTEY 41 (106)
T ss_dssp SSCCSCCCCCCCCCEEEETTEEEEECCCCSC-----------------------------------------SSSCCCEE
T ss_pred CCCCCcCCCCCCEEEEcCCCEEEEEEcCCCC-----------------------------------------CCCcceEE
Confidence 3445666777777777777777777776653 44478888
Q ss_pred EEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCC
Q psy8771 655 ELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGA 718 (904)
Q Consensus 655 ~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~ 718 (904)
.|+|+..... +........+.+.|.+|+|++.|.|+|+|+|..|.|.+|..+.++|...+|..
T Consensus 42 ~v~~~~~~~~-~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~v~~~T~~~~P~~ 104 (106)
T 1x4x_A 42 RLEWGGVEGS-MQICYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSSGPS 104 (106)
T ss_dssp EEEEESSTTS-CCEEEEESCSEEEEESCCSSCEEEEEEEEECSSCCCCBCCCEEEECCCCCSCC
T ss_pred EEEEEcCCCc-eEEEEeCCcceEEEcCCCCCCEEEEEEEEEcCCcCCCCcCCEEEECCCCCcCC
Confidence 8888766532 33334455679999999999999999999999999999999999999887763
No 153
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.43 E-value=1.6e-12 Score=113.19 Aligned_cols=114 Identities=19% Similarity=0.260 Sum_probs=90.4
Q ss_pred CCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCcee----eEEEEEEeCCCCCCcceEEEeecCceEE
Q psy8771 466 GATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQIT----GYKVYYTQDQSLPMSAWETQVVDNNQLT 541 (904)
Q Consensus 466 ~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~----~Y~v~~~~~~~~~~~~~~~~~~~~~~~~ 541 (904)
+..|....+.+....|+.+|.+|++...+.++|.|+|.++...++.+. +|+|+|+...... ..|... ....+++
T Consensus 3 ~~~s~~~~~~~~~~~pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~i~~~~~~Y~v~y~~~~~~~-~~~~~~-~~~~~~~ 80 (123)
T 2edd_A 3 SGSSGFPTSVPDLSTPMLPPVGVQAVALTHDAVRVSWADNSVPKNQKTSEVRLYTVRWRTSFSAS-AKYKSE-DTTSLSY 80 (123)
T ss_dssp SCCSCCCCSCSSCCCSSCCCEEEEEEEEETTEEEEEEECSSSCSSCCCSCCCCEEEEEEETTCTT-CCCCCE-EESSSEE
T ss_pred CccCCCCcCCCccCCCCCCCcceEEEEcCCCeEEEEecCCCCCcccccCcCceEEEEEEECCCCC-ccEEEE-eCCceEE
Confidence 344555666666677889999999999999999999998765554444 9999999864321 223222 2357889
Q ss_pred EEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEecCCC-CCC
Q psy8771 542 TISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVKTQQG-VPS 581 (904)
Q Consensus 542 ~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~-~p~ 581 (904)
.|.+|+|++.|.|+|+|+|..|.|++|..+.++|... +|.
T Consensus 81 ~v~gL~P~T~Y~f~V~A~n~~g~g~~S~~v~~~T~~~~~Ps 121 (123)
T 2edd_A 81 TATGLKPNTMYEFSVMVTKNRRSSTWSMTAHATTYEASGPS 121 (123)
T ss_dssp EEESCCTTCEEEEEEEECCSSSCCCCCCCEEEECCCSSSCC
T ss_pred EecCCCCCCEEEEEEEEeCCCcccCCCCCEEEEccCCCCCC
Confidence 9999999999999999999999999999999999887 765
No 154
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.43 E-value=1.7e-12 Score=125.31 Aligned_cols=172 Identities=19% Similarity=0.220 Sum_probs=118.5
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEE
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~ 174 (904)
+..+|.|...+.+ +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+....++.+. ...|.|.++ +|+|.|+|.
T Consensus 4 ~~~~P~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 81 (197)
T 3lcy_A 4 SGEAPGIRKEMKD-VTTKLGEAAQLSCQIVGRPLPDIKWYRF-GKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCI 81 (197)
T ss_dssp CCEEEEEEECCCC-EEEETTSEEEEEEEEEEESCCEEEEEET-TEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEE
T ss_pred cCCCCcccccCCc-eEEeCCCcEEEEEEEecCCCCEEEEEEC-CEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEE
Confidence 4578899999988 9999999999999999999999999999 6666666665542 228999999 699999999
Q ss_pred EEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCC----CCCCeEEeecc
Q psy8771 175 AASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKA----ANTPYSEISGI 250 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~----~~~~~~~~~~~ 250 (904)
+.|..|.......|.|.......... ..+..+.+ .....+.|.+...+.+... +.|...+ ....+......
T Consensus 82 ~~n~~~~~~~~~~l~v~~~p~~~~~~-~~~~~~~~--~~g~~~~l~C~~~~~p~p~--v~W~~~~~~~~~~~~~~~~~~~ 156 (197)
T 3lcy_A 82 ATNEVGEVETSSKLLLQATPQFHPGY-PLKEKYYG--AVGSTLRLHVMYIGRPVPA--MTWFHGQKLLQNSENITIENTE 156 (197)
T ss_dssp EECSSCEEEEEEEEEEEEEEEECTTS-CCCSEEEE--ETTSCEEEEEEEEEESCCE--EEEEETTEECCCCSSEEEEECS
T ss_pred EECCCCceeEEEEEEEEcCCCCCCCc-cCCcceee--cCCCeEEEEEEEeeeeCCe--eEEeECCEECCCCCceEEEEcC
Confidence 99999998888888887432211111 11222322 2344555555543222222 3333322 12222322333
Q ss_pred eeceEEEcCCCC-CCeEEEEEEEEcCCCCC
Q psy8771 251 ITTYYTVRNLSP-YTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 251 ~~~~~~i~~L~p-~~~Y~~~v~a~n~~g~s 279 (904)
....+.|.++.. .+.+.|+|.|.|..|..
T Consensus 157 ~~~~L~i~~~~~~~d~G~Y~C~a~n~~g~~ 186 (197)
T 3lcy_A 157 HYTHLVMKNVQRKTHAGKYKVQLSNVFGTV 186 (197)
T ss_dssp SEEEEEESSCCHHHHCEEEEEEEECSSCEE
T ss_pred CEEEEEEccccchhhCceEEEEEEcCcCce
Confidence 346799999985 78999999999998864
No 155
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.42 E-value=4.5e-12 Score=123.01 Aligned_cols=190 Identities=16% Similarity=0.107 Sum_probs=138.0
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEE---ecccceEEEeCCC--CCcEEEEEEEE
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRR---IGLVETYSLTGLY--PNTLYYIWLAA 694 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~---~~~~~~~~l~~L~--p~t~Y~v~V~a 694 (904)
..++|+||++...+...+ |.|.++...++....|.|+|...+...|.... ....+.+.|.++. +...|.++|+|
T Consensus 8 ~lp~P~nv~~~s~n~~~i-L~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~~~~~~~Cdlt~~~~~~~~~Y~~RV~A 86 (221)
T 4doh_R 8 GLPKPANITFLSINMKNV-LQWTPPEGLQGVKVTYTVQYFIYGQKKWLNKSECRNINRTYCDLSAETSDYEHQYYARVRA 86 (221)
T ss_dssp ---CCEEEEEEEETTEEE-EEEECCCCSSCCCCEEEEEEEETTSCCCEECGGGSSBSSSEEECTTTTCCSSCCEEEEEEE
T ss_pred CCCCCceeEEEEECCcEE-EEEcCCCCCCCCCeEEEEEEEECCCCCceecccccCCCCCEEeCCCccccCCCCEEEEEEE
Confidence 357899999999888775 99999765456789999999986555553221 2235688898875 56789999999
Q ss_pred EcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCC--CCcc---------EEEEEEEEEEccCCC
Q psy8771 695 QSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVER--SNGH---------IVYYKLQFVETGRSD 763 (904)
Q Consensus 695 ~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~--~~g~---------~~~Y~v~~~~~~~~~ 763 (904)
..+.+.+.++....|.........||. +.+. ...++|.|.|.+|.... .+|. ...|.|.|+..+...
T Consensus 87 ~~g~~~S~w~~~~~F~p~~~t~igPP~-v~v~-~~~~~l~V~~~~P~~~~~~~~~~~~s~~~i~~~l~Y~V~y~~~~~~~ 164 (221)
T 4doh_R 87 IWGTKCSKWAESGRFYPFLETQIGPPE-VALT-TDEKSISVVLTAPEKWKRNPEDLPVSMQQIYSNLKYNVSVLNTKSNR 164 (221)
T ss_dssp ESSSCBCCCEECCCBCHHHHCBCCCCE-EEEE-CCSSCEEEEEECCBCCCSSTTSCCCBHHHHSTTCEEEEEEEETTTTE
T ss_pred EcCCcccCCEecCceechhhCccCCCE-EEEE-ECCCEEEEEEeCCCcccccCCCCceEHHHhcCceEEEEEEEECCCCc
Confidence 998888877665556544444455665 7777 47789999999985321 1231 358999999876432
Q ss_pred CccEEEEecCcceEEecCCCCCceEEEEEEEeeC--CCCCCCCCcEEeecCCCC
Q psy8771 764 SEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTS--IGDGPSSYPITIRTHEDD 815 (904)
Q Consensus 764 ~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~--~g~g~~s~~~~~~t~~~~ 815 (904)
. ... ......+.|.+|+|++.|.|+|+|... .|.|.+|..+.+.|..+.
T Consensus 165 ~--~~~-~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~T~~d~ 215 (221)
T 4doh_R 165 T--WSQ-CVTNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCARTLKDQ 215 (221)
T ss_dssp E--EEE-EECSSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEECCCC-
T ss_pred E--EEE-eecCcEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEecCCCc
Confidence 2 111 125578999999999999999999975 688999999999997653
No 156
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.42 E-value=1.6e-12 Score=141.20 Aligned_cols=257 Identities=12% Similarity=0.065 Sum_probs=138.6
Q ss_pred CcceeeeccceEEEEecC----CCCCcc-eeeEeeCCCCCCCCcEEEeccCCceEEEEeCCCCCC--------Cceec--
Q psy8771 2 DTRCYVESPEEVFIILCP----LPPLIP-GYILVTEPGTAPRDVQVRPLSSSTMVIQWDEPETPN--------GQITH-- 66 (904)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~----~~p~~~-~~~~~~~p~~~p~~l~~~~~~~~s~~v~W~~~~~~~--------g~i~~-- 66 (904)
.|.|.|.++......... .+|.+. ..-.+.... ....|.|...+.+.+.|+|.+..... +.+..
T Consensus 117 ~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~p~~~~~~-~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~ 195 (423)
T 3qs7_E 117 EYLLFIQSEATNYTILFTVSIRNTLLYTLRRPYFRKME-NQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEE 195 (423)
T ss_dssp EEEEEEEC--CEEEEEEEEEEC-----CEEEEEEEECS-SSSCEEEEEEESSCCEEEEEEC-------------CEEECC
T ss_pred EEEEEEEcCCCcEEEEEEEEEecCccccccCCcEeccC-CceEEEEEEeeecCCeEEEEECCCCCccccccccccccccc
Confidence 589999998765443222 223221 111122223 55678999999999999998753211 11111
Q ss_pred ccccccccceEEEEeeeccCCeee--eeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEcc-CCCCeEEEeeCC
Q psy8771 67 PPTRAARSHARLAAQSVLRRGRLA--HAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPMPFVKWRKGQ 143 (904)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p~i~W~k~~ 143 (904)
..++..+.....|...+.. |... .+.+.+ ..+|.+ .+.+ ..+.+|+.+.|.|.+.| .|.|.|+|+|+
T Consensus 196 ~~l~~~d~G~Y~C~A~N~~-G~~~~~~~~l~V-----~~~p~~--~~~~-~~v~~G~~v~L~C~~~g~~p~p~i~W~k~- 265 (423)
T 3qs7_E 196 KVLHELFGTDIRCCARNEL-GRECTRLFTIDL-----NQTPQT--TLPQ-LFLKVGEPLWIRCKAVHVNHGFGLTWELE- 265 (423)
T ss_dssp SEECCCCSSCEEEEEECSS-CEEEEECEEEES-----SSCCCS--STTE-EEEETTSCEEEEEEEEESSSCCCEEEEES-
T ss_pred eEEecccCeEEEEEEEcCC-CCcceeeEEEEE-----ecCCcc--CCCc-eEEeCCCeEEEEEEEEcCCCCcEEEEEEC-
Confidence 1122334444455554433 4332 233443 334443 3344 88999999999999999 77899999999
Q ss_pred ccccCCCCce----------eecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEe
Q psy8771 144 NIELTPDDKL----------PVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISE 211 (904)
Q Consensus 144 ~~~~~~~~~~----------~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~ 211 (904)
+..+.....+ ....+.|.|.++ +|+|.|+|.|.|. .+..+.|.|... +.+.. .|....+..
T Consensus 266 g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~--p~i~~--~~~~~~~~v 338 (423)
T 3qs7_E 266 NKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEK--GFINA--TNSSEDYEI 338 (423)
T ss_dssp SSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESS--CEEEE--C---CEECC
T ss_pred CEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeC--CcceE--cCCCccEEe
Confidence 6555443211 233457999999 6999999999997 677788888721 11100 111111111
Q ss_pred ecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEee--cceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 212 VTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEIS--GIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 212 ~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~--~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
.....+.|.+...+.+.. .|.|...+. ...... ......+....+...+.+.|+|.|.|..|...
T Consensus 339 ~~G~~v~l~C~~~g~P~p--~i~W~k~g~--~l~~~~~~~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~ 405 (423)
T 3qs7_E 339 DQYEEFCFSVRFKAYPQI--RCTWTFSRK--SFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFT 405 (423)
T ss_dssp CTTCCCCEEEEEEEESCC--EEEEEETTE--EEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEE
T ss_pred cCCCeEEEEEEEEEcCCC--eEEEEECCE--ECCCccccccCCcEEEEEecccccCEEEEEEEEcCCceEE
Confidence 222344444443322222 344544321 110000 00112222255677899999999999998653
No 157
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.42 E-value=6.1e-12 Score=120.72 Aligned_cols=183 Identities=10% Similarity=0.059 Sum_probs=133.9
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEe-----CCccccceE---EecccceEEEeC-CCCCcEEEE
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWND-----TYAKAKHHR---RIGLVETYSLTG-LYPNTLYYI 690 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~-----~~~~~~~~~---~~~~~~~~~l~~-L~p~t~Y~v 690 (904)
..++|+||++...+.. ..|+|.++.. ......|.|+|.. .+...|... .....+.+.|.+ |..+..|.+
T Consensus 6 ~lp~P~nv~~~s~n~~-~iL~W~p~~~-~~~~~~Y~V~y~~~~~~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~Y~~ 83 (206)
T 4doh_B 6 ILPAPQQLSVLSTNMK-HLLMWSPVIA-PGETVYYSVEYQGEYESLYTSHIWIPSSWCSLTEGPECDVTDDITATVPYNL 83 (206)
T ss_dssp CCCCCCCCEEEEETTE-EEEECCCCCC-SSSCCEEEEEEEEHHHHHHSTTCCEEEEEEEEESSSEEECTTTCCSSSCEEE
T ss_pred cCCCCCeeEEEEeCCE-EEEEECCCCC-CCCCEEEEEEEEEeccccCCCccceecccccCCCCCEEcCCccccCCCCEEE
Confidence 3578999999998887 7999999853 3345789999994 344445332 223456888884 777889999
Q ss_pred EEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEE
Q psy8771 691 WLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT 770 (904)
Q Consensus 691 ~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~ 770 (904)
+|+|.+..+.+.++....+......-..||. +.+. ....+|.|.|.+| +.+..|.|.|+..+.... .....
T Consensus 84 RVrA~~~~~~S~w~~~~~f~~~~~t~i~PP~-v~v~-~~~~~i~V~~~~p------~~~l~Y~v~y~~~~~~~~-~~~~~ 154 (206)
T 4doh_B 84 RVRATLGSQTSAWSILKHPFNRQSTILTRPG-MEIT-KDGFHLVIELEDL------GPQFEFLVAYWRREPGAE-EHVKM 154 (206)
T ss_dssp EEEEEETTEECCCEECSSCBCGGGCBCCCCC-EEEE-EETTEEEEEECCC------CTTCEEEEEEEESSSSCC-CEEEE
T ss_pred EEEEEcCCCccCccccccccchhhcccCCCe-EEEE-eCCCEEEEEecCC------CCcEEEEEEEEEcCCCce-eEEeE
Confidence 9999998888877655555444333333444 7776 4788999999977 347799999998865433 12223
Q ss_pred ec-CcceEEecCCCCCceEEEEEEEeeC--CCCCCCCCcEEeecCC
Q psy8771 771 LK-NQTSFVLDELKKWTEYRIWVLAGTS--IGDGPSSYPITIRTHE 813 (904)
Q Consensus 771 ~~-~~~~~~i~~L~p~t~Y~~~V~a~~~--~g~g~~s~~~~~~t~~ 813 (904)
+. ....+.|.+|+|++.|.|+|+|... .|.|.+|.+..+.|..
T Consensus 155 ~~~~~~~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~S~~~C~~t~~ 200 (206)
T 4doh_B 155 VRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTECVEVQG 200 (206)
T ss_dssp ECCSSSEEEEEECCSSSCEEEEEEEEEGGGTEECCCCCCEEECC--
T ss_pred EccCCeEEEEeCCCCCCcEEEEEEEEecCCCCCCCCCCCEeEEccc
Confidence 33 4678999999999999999999986 3788999999998854
No 158
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.42 E-value=3.1e-12 Score=138.60 Aligned_cols=249 Identities=14% Similarity=0.205 Sum_probs=150.7
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC--ceeecceEEEEeee--cC------CeEEEE
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD--KLPVGRNVLTLDRV--TE------SENYTC 173 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~--~~~~~~~~l~i~~l--~d------~g~Y~c 173 (904)
+|.|...|.+.+.+.+|+.++|.|.+.|.|.|.|+|+|++|..+.... +....+++|.|.++ +| +|.|+|
T Consensus 3 ~P~f~~~p~~~~~~~~G~~v~l~C~~~g~p~p~v~W~k~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~~~~~d~G~Y~C 82 (388)
T 2v5m_A 3 GPVFLKEPTNRIDFSNSTGAEIECKASGNPMPEIIWIRSDGTAVGDVPGLRQISSDGKLVFPPFRAEDYRQEVHAQVYAC 82 (388)
T ss_dssp EEEEEECCCSEEEEETTTCEEEECEEEEESCCEEEEEETTSCBCCCBTTTBEECSTTEEEECCCCGGGCCHHHHEEEEEE
T ss_pred CCchhhCCCceEEEEcCccEEEEEECCCCCCCEEEEEcCCCCccccCCCceEEcCCceEEecccChhhccccccCceEEE
Confidence 688988888767789999999999999999999999994376665432 33347789999998 45 999999
Q ss_pred EEEecCcce-EEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccc-eEEEEEEEeCCCCC---------
Q psy8771 174 IAASVLGVI-ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETL-LYYVIQYKPKAANT--------- 242 (904)
Q Consensus 174 ~a~n~~g~~-~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~-~~y~v~~~~~~~~~--------- 242 (904)
.|.|..|.. +..+.|.+. ..+... ..+....+ .....++|.+...+.+. ....+.|...+...
T Consensus 83 ~a~n~~g~~~s~~~~v~v~--~~p~~~--~~~~~~~v--~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~ 156 (388)
T 2v5m_A 83 LARNQFGSIISRDVHVRAV--VAQYYE--ADVNKEHV--IRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAEYDG 156 (388)
T ss_dssp EEEETTEEEECCCEEEEEE--CCCCCC--CBCCCEEE--ETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSCBTT
T ss_pred EEEccCCeEEecceEEEEc--cccccc--cCccceee--ecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccCCCC
Confidence 999999874 345555555 222111 22333333 34457788887663321 22455665543211
Q ss_pred CeEEeecceeceEEEcCCCCCCe-EEEEEEEEcCCCCCC-CC---CCeEEecCCC-----CCCCCCCceEecccCCCeeE
Q psy8771 243 PYSEISGIITTYYTVRNLSPYTE-YEFYIIAVNNLGRGP-PS---SPAVITTGET-----EPGTAPRDVQVRPLSSSTMV 312 (904)
Q Consensus 243 ~~~~~~~~~~~~~~i~~L~p~~~-Y~~~v~a~n~~g~s~-~s---~~~~~~t~~~-----~p~~~p~~l~~~~~~~~~v~ 312 (904)
... + .....+.|.+++..+. +.|+|.|.|..+... .+ ..+.+..... .+........+. ....+.
T Consensus 157 ~~~-~--~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~--~G~~v~ 231 (388)
T 2v5m_A 157 KYL-V--LPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELM--VAHTIS 231 (388)
T ss_dssp TEE-E--CTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEE--TTSCEE
T ss_pred cEE-E--ccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEe--eCCcEE
Confidence 111 1 1235799999999999 999999999764321 11 1222221100 000011111221 134555
Q ss_pred EEecCCCCCCceeeEEEEE--------------eeceeEEEEEcCCCCCcEEEEEEEEEcCCCCC
Q psy8771 313 IQWDEPETPNGQITAKHHR--------------RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEG 363 (904)
Q Consensus 313 l~W~~p~~~~~~~~~~~~~--------------~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~ 363 (904)
|.+.....+...+.++... .......+.|..+.......+++.+.|..|..
T Consensus 232 l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 296 (388)
T 2v5m_A 232 LLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGE 296 (388)
T ss_dssp ECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred EEEECCCCCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCce
Confidence 5555433333334444320 00112367888888888888899999887753
No 159
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.41 E-value=1.1e-12 Score=142.56 Aligned_cols=161 Identities=12% Similarity=0.168 Sum_probs=106.7
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC--Cceee----cceEEEEeee--cCCeEEEEE
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD--DKLPV----GRNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~--~~~~~----~~~~l~i~~l--~d~g~Y~c~ 174 (904)
.+|.+. +.. ..+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+... .++.. ....|.|.++ +|+|.|+|.
T Consensus 213 ~~p~~~--~~~-~~~~~G~~v~l~C~~~g~p~~~i~W~~~-g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 288 (395)
T 1bih_A 213 PVPQYV--SKD-MMAKAGDVTMIYCMYGSNPMGYPNYFKN-GKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCE 288 (395)
T ss_dssp CEEEEE--CCS-EEEETTSCEEEEEEEECSSCCCCEEEET-TEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEE
T ss_pred cCceec--CCc-eEEECCCcEEEEEEeccCCCCeEEEEEC-CEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEE
Confidence 355552 445 8899999999999999999999999999 6666443 33332 2337999999 699999999
Q ss_pred EEecCcceEE-EEEEEEEeecCCCCCCCCCCcc-eEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC---CCeEEeec
Q psy8771 175 AASVLGVIET-STIVKVQCKYAPLLTLPVAPLD-VKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN---TPYSEISG 249 (904)
Q Consensus 175 a~n~~g~~~~-~~~l~v~~~~~~~~~~P~~p~~-l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~---~~~~~~~~ 249 (904)
|.|..|.... .+.|.|.... .+. ..|.. ..+ .....++|.+...+.+... +.|...+.. ..+. .
T Consensus 289 a~n~~g~~~~~~~~l~V~~~P--~~~--~~~~~~~~~--~~g~~~~l~C~~~g~p~p~--v~W~~~g~~~~~~~~~-~-- 357 (395)
T 1bih_A 289 VDNGVGKPQKHSLKLTVVSAP--KYE--QKPEKVIVV--KQGQDVTIPCKVTGLPAPN--VVWSHNAKPLSGGRAT-V-- 357 (395)
T ss_dssp ECCSSSSCEEEEEEEEEEEEE--EEE--ECCCSEEEE--CTTSCEEEECEEEEESCCC--CEEEETTEECCSSSEE-E--
T ss_pred EEeCCCCceEEEEEEEEEcCC--ccc--cCCCcceEe--cCCCeEEEEEEECcccCCe--eEEEECCEECCCCceE-E--
Confidence 9999998655 8888887321 111 12223 222 2234455555543222111 334333211 1111 1
Q ss_pred ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
....+.|.++...+.+.|+|.|.|..|..
T Consensus 358 -~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~ 386 (395)
T 1bih_A 358 -TDSGLVIKGVKNGDKGYYGCRATNEHGDK 386 (395)
T ss_dssp -ETTEEEESSCCSTTCEEEEEEEEETTEEE
T ss_pred -ECCEEEEeeCCcccCEEEEEEEEccCCCc
Confidence 12479999999999999999999998864
No 160
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=99.41 E-value=1.3e-12 Score=110.64 Aligned_cols=98 Identities=24% Similarity=0.309 Sum_probs=81.1
Q ss_pred cCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCcc-EEEEEEEEEEccCCCCccEEEEec---CcceEEecCCCCCce
Q psy8771 712 KQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH-IVYYKLQFVETGRSDSEASIVTLK---NQTSFVLDELKKWTE 787 (904)
Q Consensus 712 ~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~-~~~Y~v~~~~~~~~~~~~~~~~~~---~~~~~~i~~L~p~t~ 787 (904)
.+++|.. |.++.+...+.+ +.|+|++| ...||. +.+|.|+|+..+...+......+. ..+.++|.+|+|++.
T Consensus 3 ~~~~P~~-P~~~~~~~~~~~-v~l~W~~P--~~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~ 78 (105)
T 2haz_A 3 HMDTPSS-PSIDQVEPYSST-AQVQFDEP--EATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETT 78 (105)
T ss_dssp CCCCCCC-CEEEEEEECSSC-EEEEEECC--SCCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCE
T ss_pred CCCCCcC-CCCCEEEEcCCc-EEEEEcCC--cccCCccccEEEEEEEECCCCCCccceEEccccCCccEEEECCCCCCCE
Confidence 4556775 899999888887 99999999 467787 999999999987654433323333 568999999999999
Q ss_pred EEEEEEEeeCCCCCCCCCcEEeecCC
Q psy8771 788 YRIWVLAGTSIGDGPSSYPITIRTHE 813 (904)
Q Consensus 788 Y~~~V~a~~~~g~g~~s~~~~~~t~~ 813 (904)
|.|+|+|.|..|.|++|+.+.++|.+
T Consensus 79 Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 79 YAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEEEEEcCCccCCCcCCEeeEEec
Confidence 99999999999999999999999964
No 161
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.41 E-value=1.9e-12 Score=136.48 Aligned_cols=230 Identities=16% Similarity=0.165 Sum_probs=140.5
Q ss_pred CCCCCcEEEecc---------CCceEEEEeCCCCC---------CCceecccccccccc-eEEEEeeeccCCeeeeeeee
Q psy8771 35 TAPRDVQVRPLS---------SSTMVIQWDEPETP---------NGQITHPPTRAARSH-ARLAAQSVLRRGRLAHAVRQ 95 (904)
Q Consensus 35 ~~p~~l~~~~~~---------~~s~~v~W~~~~~~---------~g~i~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~ 95 (904)
+.+..|.|...+ .+.+.|.|.+.... ++.+........|.. ...|...+..+.......+.
T Consensus 44 G~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~ 123 (329)
T 3oq3_B 44 GEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRS 123 (329)
T ss_dssp TSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTTEETTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEE
T ss_pred CCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCceeecceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEE
Confidence 355555555444 35689999876532 344555555555666 56666555443322222222
Q ss_pred ccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCCccccC-CCCceeecceEEEEeee--cCCeEE
Q psy8771 96 VADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQNIELT-PDDKLPVGRNVLTLDRV--TESENY 171 (904)
Q Consensus 96 v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~~~~~~-~~~~~~~~~~~l~i~~l--~d~g~Y 171 (904)
+ ...||.+...+.. ..+.+|+.+.|.|.+.|.| .|.|+|+|+ +..+. ...++...++.|.|.++ +|+|.|
T Consensus 124 v----~~~~p~~~~~~~~-~~~~~G~~v~L~C~~~g~p~~~~i~W~k~-~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y 197 (329)
T 3oq3_B 124 H----IRKPPSCIPETYE-LGTHDKYGIDLYCGILYAKHYNNITWYKN-NQELIIDGTKYSQSGQNLIIHNPELEDSGRY 197 (329)
T ss_dssp E----ECCCCSCEEEEEE-TTSSTTTCEEEECCCCSCCCCCEEEEEET-TEECCCSSSSEEEETTEEEECSCCGGGCEEE
T ss_pred E----EcCCCcEeccccc-eEEeCCCcEEEEeccCCCCCCceEEEEEC-CccCCCCCceEecCCCEEEEeecChhhCEEE
Confidence 2 2345555444433 5567899999999999999 999999999 55554 45566666789999999 699999
Q ss_pred EEEEEec--CcceEEE----EEEEEEeecCCCCCCCC------CCcceEEEeecCCeEEEEEeCCCcc--ceEEEEEEEe
Q psy8771 172 TCIAASV--LGVIETS----TIVKVQCKYAPLLTLPV------APLDVKISEVTATSVRLDWTYPSET--LLYYVIQYKP 237 (904)
Q Consensus 172 ~c~a~n~--~g~~~~~----~~l~v~~~~~~~~~~P~------~p~~l~~~~~~~~sv~l~W~~~~~~--~~~y~v~~~~ 237 (904)
+|.|.|. .|..... +.|.|. ..|. .|....+. ....++|.+...+.+ .....+.|..
T Consensus 198 ~C~a~n~~~~g~~~~~~s~~~~l~V~-------~~~~~~~~~~~~~~~~v~--~G~~~~l~C~~~g~p~~~~~i~v~W~~ 268 (329)
T 3oq3_B 198 DCYVHYDDVRIKNDIVVSRCKILTVI-------PSQDHRFKLILDPKINVT--IGEPANITCTAVSTSLLVDDVLIDWEN 268 (329)
T ss_dssp EEEEEECCTTSSSCEEEEEEEEEEEE-------CCCCCCEEEECCSEEEEC--TTSCEEEEEEEEETTCCTTCCEEEEEC
T ss_pred EEEEEecccCCCceeEEEeeEEEEEE-------CCCCCCCceecCCeeEEe--cCCCEEEEEEEEECCCCCCCcEEEEEE
Confidence 9999997 6654333 667776 2221 22233332 233455555443222 1111345554
Q ss_pred CCCC-----CCeEEe----ecceeceEEEcCCCCCCeE-EEEEEEEcCCCCC
Q psy8771 238 KAAN-----TPYSEI----SGIITTYYTVRNLSPYTEY-EFYIIAVNNLGRG 279 (904)
Q Consensus 238 ~~~~-----~~~~~~----~~~~~~~~~i~~L~p~~~Y-~~~v~a~n~~g~s 279 (904)
.+.. ...... .......+.|.++...+.+ .|+|.|.|..|..
T Consensus 269 ~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~ 320 (329)
T 3oq3_B 269 PSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDK 320 (329)
T ss_dssp TTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEE
T ss_pred CCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCce
Confidence 3221 100000 0013577999999999999 9999999998864
No 162
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.41 E-value=1.5e-12 Score=112.03 Aligned_cols=104 Identities=28% Similarity=0.351 Sum_probs=86.9
Q ss_pred eeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCC
Q psy8771 707 IPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKW 785 (904)
Q Consensus 707 ~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~ 785 (904)
+.++|.+.+|. +|.++++...+.+++.|+|++| ...+|.+.+|.|+|+..+..... ...+. ..+.+.|.+|.|+
T Consensus 2 v~~~T~~~~P~-~P~~l~~~~~~~~sv~l~W~~p--~~~~g~i~~Y~v~~~~~~~~~~~--~~~~~~~~~~~~i~~L~p~ 76 (111)
T 1x5l_A 2 SSGSSGQAAPS-QVVVIRQERAGQTSVSLLWQEP--EQPNGIILEYEIKYYEKDKEMQS--YSTLKAVTTRATVSGLKPG 76 (111)
T ss_dssp CCCCCSCCCCC-CCCCEECSCBCSSCEEEEECCC--SCCCSCCCEEEEEEEESSSCCSS--CEEEEESSSEEEECSCCTT
T ss_pred ceEEcCCCCCC-CCceEEEEEcCCCEEEEEECCC--CCCCCEEEEEEEEEEECCCCcee--EEEecCCCCEEEEcCCCCC
Confidence 34678888787 5789999889999999999999 45688999999999987643322 23334 7889999999999
Q ss_pred ceEEEEEEEeeCCCCCCCCCcEEeecCCCC
Q psy8771 786 TEYRIWVLAGTSIGDGPSSYPITIRTHEDD 815 (904)
Q Consensus 786 t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~ 815 (904)
+.|.|+|+|.|..|.|++|..+.++|.+.+
T Consensus 77 t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 106 (111)
T 1x5l_A 77 TRYVFQVRARTSAGCGRFSQAMEVETGKPS 106 (111)
T ss_dssp CEEEECEEEEETTEECCCCCCEEEECCCTT
T ss_pred CEEEEEEEEEeCCcCCCCcccEEEEcCCCC
Confidence 999999999999999999999999997654
No 163
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.41 E-value=1e-12 Score=108.65 Aligned_cols=87 Identities=22% Similarity=0.327 Sum_probs=73.3
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCc--cccCCCCceee--cceEEEEeee--cCCeEEEEEEE
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQN--IELTPDDKLPV--GRNVLTLDRV--TESENYTCIAA 176 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~--~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~ 176 (904)
.||.|...+.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ + ..+....++.. ....|.|.++ +|+|.|+|.|.
T Consensus 1 ~~P~i~~~~~~-~~v~~G~~~~l~C~~~g~P~p~i~W~k~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 78 (93)
T 1wit_A 1 LKPKILTASRK-IKIKAGFTHNLEVDFIGAPDPTATWTVG-DSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVK 78 (93)
T ss_dssp CCCEECCCCCE-EEECTTBCCEEEEEEECCSSCEEEEECS-TTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEE
T ss_pred CCCeEEcCCCc-eEEeCCCEEEEEEEEEEcCCCEEEEEEC-CCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEE
Confidence 37888877776 9999999999999999999999999999 5 66665544433 3467999998 69999999999
Q ss_pred ecCcceEEEEEEEEE
Q psy8771 177 SVLGVIETSTIVKVQ 191 (904)
Q Consensus 177 n~~g~~~~~~~l~v~ 191 (904)
|..|..+..+.|.|+
T Consensus 79 N~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 79 NELGEDEAIFEVIVQ 93 (93)
T ss_dssp ETTEEEEEEEEEEEC
T ss_pred cCCCeEEEEEEEEEC
Confidence 999998888888763
No 164
>4doh_R Interleukin-20 receptor subunit alpha; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.41 E-value=5.3e-12 Score=122.56 Aligned_cols=193 Identities=18% Similarity=0.208 Sum_probs=133.6
Q ss_pred CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee---cCceEEEEcCCC--CCCeEEEEEE
Q psy8771 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV---DNNQLTTISDLT--PHTIYTIRVQ 557 (904)
Q Consensus 483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~--p~t~Y~~~V~ 557 (904)
.+|.|+++...+-.. .|+|+++...++....|.|+|...+. ..|..... ...+.+.|+++. +...|.++|+
T Consensus 10 p~P~nv~~~s~n~~~-iL~W~p~~~~~~~~~~Y~Vqy~~~~~---~~W~~~~~C~~~~~~~Cdlt~~~~~~~~~Y~~RV~ 85 (221)
T 4doh_R 10 PKPANITFLSINMKN-VLQWTPPEGLQGVKVTYTVQYFIYGQ---KKWLNKSECRNINRTYCDLSAETSDYEHQYYARVR 85 (221)
T ss_dssp -CCEEEEEEEETTEE-EEEEECCCCSSCCCCEEEEEEEETTS---CCCEECGGGSSBSSSEEECTTTTCCSSCCEEEEEE
T ss_pred CCCceeEEEEECCcE-EEEEcCCCCCCCCCeEEEEEEEECCC---CCceecccccCCCCCEEeCCCccccCCCCEEEEEE
Confidence 468999999988655 59999976544667899999997542 45755432 456778999875 5678999999
Q ss_pred EEeCCCCCCCCCcEEEecC-CCCCCCCCCceEEecCCCeEEEEEeCCCCC----CCCceEEEEEeccCCCCCcceEEEee
Q psy8771 558 AFTSVGPGPLSAPVLVKTQ-QGVPSQPRDLRAVDIQETAVTLAWSKPTHS----GENIISYELYWNDTYAKPRDLRAVDI 632 (904)
Q Consensus 558 a~~~~g~~~~S~~~~~~t~-~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~----~~~~~~y~v~~~~~~~~p~~l~~~~~ 632 (904)
|..+.+.+.|+....|... .....+|. +.+.. ..++|.|.|.+|... ++..
T Consensus 86 A~~g~~~S~w~~~~~F~p~~~t~igPP~-v~v~~-~~~~l~V~~~~P~~~~~~~~~~~---------------------- 141 (221)
T 4doh_R 86 AIWGTKCSKWAESGRFYPFLETQIGPPE-VALTT-DEKSISVVLTAPEKWKRNPEDLP---------------------- 141 (221)
T ss_dssp EESSSCBCCCEECCCBCHHHHCBCCCCE-EEEEC-CSSCEEEEEECCBCCCSSTTSCC----------------------
T ss_pred EEcCCcccCCEecCceechhhCccCCCE-EEEEE-CCCEEEEEEeCCCcccccCCCCc----------------------
Confidence 9998887777655444432 22334454 88774 678999999988531 0000
Q ss_pred ccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcC--CCCCCCCCCeeEE
Q psy8771 633 QETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP--RGEGATTPPIPVR 710 (904)
Q Consensus 633 ~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~--~G~~~~s~~~~~~ 710 (904)
++|. .-.....|.|.|+..+....... ......+.|.+|+|++.|.|+|+|... .|.|.+|..+.+.
T Consensus 142 ------~s~~----~i~~~l~Y~V~y~~~~~~~~~~~-~~~~~~~~l~~L~p~t~Ycv~V~a~~~~~~~~g~~S~~~c~~ 210 (221)
T 4doh_R 142 ------VSMQ----QIYSNLKYNVSVLNTKSNRTWSQ-CVTNHTLVLTWLEPNTLYCVHVESFVPGPPRRAQPSEKQCAR 210 (221)
T ss_dssp ------CBHH----HHSTTCEEEEEEEETTTTEEEEE-EECSSEEEECSCCTTCEEEEEEEEECSSSCCCCCCCEEEEEE
T ss_pred ------eEHH----HhcCceEEEEEEEECCCCcEEEE-eecCcEEEEecCCCCCcEEEEEEEEEcCCCCCCCCCCCEeEe
Confidence 0000 00013589999998765544222 233468899999999999999999975 6888899888888
Q ss_pred ecCC
Q psy8771 711 TKQY 714 (904)
Q Consensus 711 t~~~ 714 (904)
|..+
T Consensus 211 T~~d 214 (221)
T 4doh_R 211 TLKD 214 (221)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8654
No 165
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.41 E-value=1.2e-12 Score=114.08 Aligned_cols=104 Identities=26% Similarity=0.476 Sum_probs=86.9
Q ss_pred CCCCCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEecc
Q psy8771 563 GPGPLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWS 642 (904)
Q Consensus 563 g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~ 642 (904)
|.|++|..+.+.|....|.+|.++++..++.+++.|+|.++..
T Consensus 1 G~g~~S~~~~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~------------------------------------- 43 (119)
T 1wfn_A 1 GSSGSSGPQLVRTHEDVPGPVGHLSFSEILDTSLKVSWQEPGE------------------------------------- 43 (119)
T ss_dssp CCCCCSCCCSCCSSCCSCCCCSCCEEESCCSSEEEEECCCCTT-------------------------------------
T ss_pred CCCCCCCCEEEECCCCCCCCCCceEEEECCCCEEEEEEcCCCC-------------------------------------
Confidence 5678899999999999999999999999999999999999865
Q ss_pred CCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCe
Q psy8771 643 KPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPI 707 (904)
Q Consensus 643 ~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~ 707 (904)
.++.+.+|.|+|+..+.... ..........+.|.+|+|++.|.|+|+|+|..|.|.+|..+
T Consensus 44 ----~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~ 106 (119)
T 1wfn_A 44 ----KNGILTGYRISWEEYNRTNTRVTHYLPNVTLEYRVTGLTALTTYTIEVAAMTSKGQGQVSAST 106 (119)
T ss_dssp ----CCSCCCEEEEEEEESSCGGGCCCEEECSSCCEEEEESCCTTCEEEEEEEEECSSCEEEEEEEE
T ss_pred ----CCCcEEEEEEEEEECCCCCceEEEEeCCCceEEEEcCCCCCCEEEEEEEEEcCCccCCCCCCE
Confidence 56678888888887764432 23334567799999999999999999999999999888655
No 166
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.41 E-value=1.8e-12 Score=113.24 Aligned_cols=110 Identities=21% Similarity=0.351 Sum_probs=88.6
Q ss_pred CCCCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCC-CCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCC
Q psy8771 566 PLSAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPT-HSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKP 644 (904)
Q Consensus 566 ~~S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~-~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~ 644 (904)
..+....+.|....|.+|.++++...+.+++.|+|.++. +
T Consensus 4 gss~~~~~~t~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~~--------------------------------------- 44 (120)
T 1x5f_A 4 GSSGEHAPATTGPLPSAPRDVVASLVSTRFIKLTWRTPASD--------------------------------------- 44 (120)
T ss_dssp CCCSSCCCCCCCCCCCCCEEEEEEEECSSCEEEEEECCSSC---------------------------------------
T ss_pred CCCCCEEecCCCCCCCCCCCcEEEecCCCEEEEEECCCCCC---------------------------------------
Confidence 345556677888888999999999999999999999986 4
Q ss_pred CCCCCceeeEEEEEEeCCccccceEE--ecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCC
Q psy8771 645 THSGENIISYELYWNDTYAKAKHHRR--IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVP 716 (904)
Q Consensus 645 ~~~~~~~~~y~v~~~~~~~~~~~~~~--~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p 716 (904)
.++.+.+|.|+|+..+...+.... ......+.|.+|+|++.|.|+|+|+|..|.|.+|..+.++|....|
T Consensus 45 --~~g~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 116 (120)
T 1x5f_A 45 --PHGDNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQNKHGSGESSAPLRVETQPESG 116 (120)
T ss_dssp --SSCCSSEEEEEEEETTCCCCEEEECSSTTCSEEEECSCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCCC
T ss_pred --CCCcEEEEEEEEEECCCCCceEEEeccCCccEEEeCCCCCCCEEEEEEEEECCCccCCCCCCEEEEeCCCCC
Confidence 456788888888887544443222 2346799999999999999999999999999999999999976544
No 167
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.40 E-value=1.5e-12 Score=114.06 Aligned_cols=114 Identities=18% Similarity=0.265 Sum_probs=87.7
Q ss_pred CCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe----ecCceEEEE
Q psy8771 468 TTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV----VDNNQLTTI 543 (904)
Q Consensus 468 ~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~----~~~~~~~~~ 543 (904)
.+..+...+... +|.+|.++.+..++.+++.|+|.++.+.++.+.+|.|+|+.........|.... ....+.+.+
T Consensus 5 ~s~~~~~~~~~~-~P~~P~~l~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v 83 (124)
T 1wis_A 5 SSGTISSGVPPE-LPGPPTNLGISNIGPRSVTLQFRPGYDGKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEV 83 (124)
T ss_dssp CSCCCCSCCCCC-CCCCCEEEEEESCCSSCEEEEEECCCCCSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEE
T ss_pred ccccccccCCCC-CCccCCCCEEEEecCCEEEEEEECCCCCCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEe
Confidence 333444444443 448999999999999999999999887777899999999984212235575543 256778999
Q ss_pred cCCCCCCeEEEEEEEEeCCCCCCCCCcE-EEecCCCCCCC
Q psy8771 544 SDLTPHTIYTIRVQAFTSVGPGPLSAPV-LVKTQQGVPSQ 582 (904)
Q Consensus 544 ~~L~p~t~Y~~~V~a~~~~g~~~~S~~~-~~~t~~~~p~~ 582 (904)
.+|.|++.|.|+|+|+|..|.|.+|... .++|....|..
T Consensus 84 ~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~P~~ 123 (124)
T 1wis_A 84 PDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSGPSS 123 (124)
T ss_dssp CSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSSCCC
T ss_pred CCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCCCCC
Confidence 9999999999999999999999998864 57777666653
No 168
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.40 E-value=2.7e-11 Score=125.24 Aligned_cols=247 Identities=12% Similarity=0.153 Sum_probs=152.4
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEEE
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIAA 176 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a~ 176 (904)
.+|.|...+.+ +.+.+|+.+.|.|.+.|.|. .|.|+|+++..+....++... ...|.|.++ +|+|.|+|.|.
T Consensus 3 ~~p~v~~~~~~-~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~ 80 (291)
T 2wim_A 3 ALLQVTISLSK-VELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQAT 80 (291)
T ss_dssp CCCEEEESCSE-EEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCceEEEeccc-eEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEe
Confidence 47888888888 99999999999999999985 899999447777666666542 348999998 69999999999
Q ss_pred ecCcce-EEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC------CCeEEeec
Q psy8771 177 SVLGVI-ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN------TPYSEISG 249 (904)
Q Consensus 177 n~~g~~-~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~------~~~~~~~~ 249 (904)
|..|.. .....|.|.. .+ .....+....+. ....+.|.+...+.+... +.|...+.. ..+..
T Consensus 81 n~~g~~~~~~~~l~v~~--~~--~~~~~~~~~~v~--~G~~v~l~C~~~~~p~~~--v~W~~~~~~~~~~~~~~~~~--- 149 (291)
T 2wim_A 81 DAKGQTQEATVVLEIYQ--KL--TFREVVSPQEFK--QGEDAEVVCRVSSSPAPA--VSWLYHNEEVTTISDNRFAM--- 149 (291)
T ss_dssp CSSSCEEEEEEEEEEEC--CC--BCCSCCCSEEEE--TTSCEEECCCCBCSSCCE--EEEECC----CBCCCSSEEE---
T ss_pred cccCceEEEEEEEEecC--Cc--ceEeCCCChhhc--CCCCEEEEEEEccCCCCE--EEEEECCccccccCCceEEE---
Confidence 998875 3555666651 11 112233343332 344566666554333222 444332211 11111
Q ss_pred ceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecC-CCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeEE
Q psy8771 250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTG-ETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITAK 328 (904)
Q Consensus 250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~-~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~~ 328 (904)
.....+.|.++...+.+.|+|.|.|..+.........+... +.....++............+.|.+.....+...+.++
T Consensus 150 ~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~ 229 (291)
T 2wim_A 150 LANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWF 229 (291)
T ss_dssp CTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEE
T ss_pred ccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCeEEEE
Confidence 12356999999999999999999998754321121222111 11111111111223334556777777655444455554
Q ss_pred EEEe----------eceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771 329 HHRR----------IGLVETYSLTGLYPNTLYYIWLAAQSPRGE 362 (904)
Q Consensus 329 ~~~~----------~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~ 362 (904)
.... ......+.|..+.....-.+++.|.|..|.
T Consensus 230 ~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~ 273 (291)
T 2wim_A 230 RNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGE 273 (291)
T ss_dssp ETTEECCCTTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTEE
T ss_pred ECCEECcCCccEEEcCCccEEEEeeCCcccCEEEEEEEEECCCc
Confidence 3211 112346888888888888889999988775
No 169
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=5.1e-12 Score=110.23 Aligned_cols=107 Identities=26% Similarity=0.429 Sum_probs=86.5
Q ss_pred CCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe--ecCceEEEEcCCC
Q psy8771 470 PPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV--VDNNQLTTISDLT 547 (904)
Q Consensus 470 ~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~L~ 547 (904)
....+.+.... |.+|.++.+...+.+++.|+|++|.+.++.+.+|.|+|+..... .|.... ....+.+.+.+|.
T Consensus 7 ~~~~~~~~~~~-P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~---~~~~~~~~~~~~~~~~i~~L~ 82 (119)
T 2ed7_A 7 GKPAIPSSSVL-PSAPRDVVPVLVSSRFVRLSWRPPAEAKGNIQTFTVFFSREGDN---RERALNTTQPGSLQLTVGNLK 82 (119)
T ss_dssp CCSSCCCSSSS-CCCCSCCEEEEECSSCEEEECCCCSCCSSCEEEEEEEEEESSCC---CCEEEECCCTTCCEEEECSCC
T ss_pred CCccCCCCCCC-CcCCcceEEEecCCCEEEEEEeCCCCCCCcEEEEEEEEEeCCCC---cceeeEeecCCceEEEeCCCC
Confidence 33444455444 48999999999999999999999987788999999999987643 222222 2557889999999
Q ss_pred CCCeEEEEEEEEeCCCCCCCCCcEEEecCCCCC
Q psy8771 548 PHTIYTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580 (904)
Q Consensus 548 p~t~Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p 580 (904)
|++.|.|+|+|+|..|.|.+|..+.+.|....|
T Consensus 83 p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~p 115 (119)
T 2ed7_A 83 PEAMYTFRVVAYNEWGPGESSQPIKVATQPESG 115 (119)
T ss_dssp SSSEEEECCEEEESSCBCSCCCCEEEECCCCSC
T ss_pred CCCEEEEEEEEEcCCccCCCcCCEEEEeCCCCC
Confidence 999999999999999999999999999876554
No 170
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=1.3e-12 Score=111.05 Aligned_cols=99 Identities=35% Similarity=0.532 Sum_probs=84.4
Q ss_pred cCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEE
Q psy8771 712 KQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRI 790 (904)
Q Consensus 712 ~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~ 790 (904)
.+.+|. +|.++++...+.+++.|+|++|. ..+|.+.+|.|+|+..+...+ ..+. ..+.+.|.+|+|++.|.|
T Consensus 4 ~~~~P~-~P~~l~~~~~~~~si~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~----~~~~~~~~~~~i~~L~p~t~Y~~ 76 (106)
T 2ed8_A 4 GSSGPG-PVENLQAVSTSPTSILITWEPPA--YANGPVQGYRLFCTEVSTGKE----QNIEVDGLSYKLEGLKKFTEYSL 76 (106)
T ss_dssp CCCCCC-CCEEEEEECSSTTEEEEEEECCS--SCSSCCCEEEEEEEETTTCCE----EEEEECSSCEEEESCCTTCEEEE
T ss_pred CCCCCc-CCceeEEEecCCCEEEEEECCCC--CCCCCeeEEEEEEEECCCCce----EEEeCCccEEEECCCCCCCEEEE
Confidence 445666 68999999999999999999994 567899999999998765432 2223 678999999999999999
Q ss_pred EEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771 791 WVLAGTSIGDGPSSYPITIRTHEDDPS 817 (904)
Q Consensus 791 ~V~a~~~~g~g~~s~~~~~~t~~~~P~ 817 (904)
+|+|.|..|.|++|..+.++|.++.|.
T Consensus 77 ~V~A~n~~G~g~~S~~~~~~T~~~~P~ 103 (106)
T 2ed8_A 77 RFLAYNRYGPGVSTDDITVVTLSDSGP 103 (106)
T ss_dssp EEEEECSSCEEEECCCEEEECCCCCCC
T ss_pred EEEEEeCCccCCCcCCEEEEcCCCCCC
Confidence 999999999999999999999888764
No 171
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.40 E-value=8.4e-12 Score=129.95 Aligned_cols=235 Identities=15% Similarity=0.266 Sum_probs=137.2
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC------------CC---ceecccccc-cccceEEEEeeeccCCeeeeeeeeccCC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP------------NG---QITHPPTRA-ARSHARLAAQSVLRRGRLAHAVRQVADP 99 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~------------~g---~i~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~v~~~ 99 (904)
....|.|...+.+.+.|.|.+.... +| .+....... .+.....|...+..+.....+.+.|...
T Consensus 22 ~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 101 (304)
T 2yd9_A 22 GVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLRE 101 (304)
T ss_dssp SCEEEEEEEECSSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEECG
T ss_pred CeEEEEEEEEEeCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEecc
Confidence 5677777777778889999775321 22 133333333 4444555555443333334445555432
Q ss_pred C--CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC---Cce-eecceEEEEeee--cCCeEE
Q psy8771 100 V--RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD---DKL-PVGRNVLTLDRV--TESENY 171 (904)
Q Consensus 100 ~--~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~---~~~-~~~~~~l~i~~l--~d~g~Y 171 (904)
. ....|.|...|.. ..+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+... .++ ...++.|.|.++ +|+|.|
T Consensus 102 ~~~p~~~p~i~~~~~~-~~v~~g~~v~l~C~~~g~p~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 179 (304)
T 2yd9_A 102 DQLPSGFPNIDMGPQL-KVVERTRTATMLCAASGNPDPEITWFKD-FLPVDPSASNGRIKQLRSGALQIESSEETDQGKY 179 (304)
T ss_dssp GGCCTTCCEEEECCCC-EEEETTSCEEECCEEECSSCCEEEEEET-TEECCGGGGTTSEEECTTSCEEECSCCGGGCEEE
T ss_pred ccCCCCCCeeecCCcc-EEEeCCCeEEEEEECccCCCCeEEEEEC-CEECcCCCCcceEEeCCCeEEEEccCCcccCEEE
Confidence 1 1233888888877 8999999999999999999999999999 6555432 233 346679999999 699999
Q ss_pred EEEEEecCcceEEE-EEEEEEee-cCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeec
Q psy8771 172 TCIAASVLGVIETS-TIVKVQCK-YAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISG 249 (904)
Q Consensus 172 ~c~a~n~~g~~~~~-~~l~v~~~-~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~ 249 (904)
+|.|.|..|..... +.|.|... ..|.+.. .|.+..+ .....++|.+...+.+... +.|...+..........
T Consensus 180 ~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~--~~~~~~v--~~G~~v~l~C~~~g~p~p~--v~W~~~~~~l~~~~~~~ 253 (304)
T 2yd9_A 180 ECVATNSAGVRYSSPANLYVRVQNVAPRFSI--LPMSHEI--MPGGNVNITCVAVGSPMPY--VKWMQGAEDLTPEDDMP 253 (304)
T ss_dssp EEEEEETTEEEECCCEEEEEECCCEEEEEEE--CCCCBCC--CTTCCEEEEEEEEEESCCE--EEEEETTEECSCSSSCC
T ss_pred EEEEEeCCCCEEeccEEEEEEeeccCCcEEe--cCCceEE--cCCCeEEEEEEEeeeCCCE--EEEEECCEECCCccccc
Confidence 99999999876543 56666511 0111110 1122111 2233455555543222222 34443321100000011
Q ss_pred ceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
.....+.+.+++ +.+.|+|.|.|..|...
T Consensus 254 ~~~~~L~i~~~~--d~G~Y~C~a~N~~G~~~ 282 (304)
T 2yd9_A 254 VGRNVLELTDVK--DSANYTCVAMSSLGVIE 282 (304)
T ss_dssp BSEEEEEECSCC--SCEEEEEEEEETTEEEE
T ss_pred CCcEEEEEcccc--cCEEEEEEEEeCCCcEE
Confidence 223457777764 78999999999988653
No 172
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.40 E-value=9.5e-12 Score=121.66 Aligned_cols=169 Identities=17% Similarity=0.320 Sum_probs=115.6
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC-CCCceee---cc--eEEEEeee---cCCeEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT-PDDKLPV---GR--NVLTLDRV---TESENYT 172 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~-~~~~~~~---~~--~~l~i~~l---~d~g~Y~ 172 (904)
..||.|...|.+ +.+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+. ...++.+ .+ ..|.|.++ +|+|.|+
T Consensus 4 ~~pP~~~~~p~~-~~v~~G~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~ 81 (212)
T 2yd1_A 4 AHPPEIIRKPQN-QGVRVGGVASFYCAARGDPPPSIVWRKN-GKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYE 81 (212)
T ss_dssp -CCCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEEET-TEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEE
T ss_pred CCCCEEEcCCCc-eEEecCCEEEEEEEEccCCCCeEEEEEC-CEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEE
Confidence 578999999998 9999999999999999999999999999 66664 4455543 22 58999988 5899999
Q ss_pred EEEEecCcc-eEEEEEEEEEeecCCCCCCC---CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC-----CC
Q psy8771 173 CIAASVLGV-IETSTIVKVQCKYAPLLTLP---VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN-----TP 243 (904)
Q Consensus 173 c~a~n~~g~-~~~~~~l~v~~~~~~~~~~P---~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~-----~~ 243 (904)
|.|.|..|. ....+.|.|..........| ..|....+ .....++|.+...+.+... +.|...+.. ..
T Consensus 82 C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~--~~g~~v~l~C~~~g~p~p~--i~W~~~~~~~~~~~~~ 157 (212)
T 2yd1_A 82 CVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVI--EVGHTVLMTCKAIGNPTPN--IYWIKNQTKVDMSNPR 157 (212)
T ss_dssp EEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEE--ETTCCEEECCEEECSSCCE--EEEEETTEECCTTSTT
T ss_pred EEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEe--ecCCeEEEEEEeccCCCCe--EEEEECCeEcccCCCe
Confidence 999999998 77888888872111000001 01222222 2234556655543333222 444433211 11
Q ss_pred eEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 244 YSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 244 ~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
+ . .....+.|.++...+.+.|+|.|.|..|...
T Consensus 158 ~-~---~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 190 (212)
T 2yd1_A 158 Y-S---LKDGFLQIENSREEDQGKYECVAENSMGTEH 190 (212)
T ss_dssp E-E---EETTEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred E-E---ccCCeEEEccCChhhCEEEEEEeecCCCcee
Confidence 1 1 1234799999999999999999999998764
No 173
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.40 E-value=1.3e-12 Score=114.69 Aligned_cols=111 Identities=22% Similarity=0.296 Sum_probs=87.2
Q ss_pred CCCCCCCCCcEEEecCCC------CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeecc
Q psy8771 561 SVGPGPLSAPVLVKTQQG------VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQE 634 (904)
Q Consensus 561 ~~g~~~~S~~~~~~t~~~------~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~ 634 (904)
..|.|++|..+.+.|... .|.+|.++++...+ +++.|+|.++..
T Consensus 3 ~~G~g~~S~~~~~~T~~~~~~~~~~P~~P~~l~~~~~~-~sv~l~W~~P~~----------------------------- 52 (126)
T 1x5i_A 3 SGSSGPATDWLSAETFESDLDETRVPEVPSSLHVRPLV-TSIVVSWTPPEN----------------------------- 52 (126)
T ss_dssp SCCCCCCCCCCCSCCCCTTSBCSSCCCSCSEEEEEEET-TEEEEEEECCSC-----------------------------
T ss_pred CCccCCCCCCEEeECccccCccCCCCCCCCeeEEEecC-CEEEEEEcCCCC-----------------------------
Confidence 568889999999999887 88999999999987 899999999875
Q ss_pred ceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCC
Q psy8771 635 TAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY 714 (904)
Q Consensus 635 ~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~ 714 (904)
.++.+.+|.|+|+...............+.++|.+|+|++.|.|+|+|+|..|.|.++. ..+.|...
T Consensus 53 ------------~~g~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~s~-~~~~T~~~ 119 (126)
T 1x5i_A 53 ------------QNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPLY-ESAVTRPH 119 (126)
T ss_dssp ------------TTBCCCEEEEEECSSCGGGEEEECCTTCCEEEECSCCSSCEECCEEEEECSSCBCCCCC-CCEECCCC
T ss_pred ------------CCCCEeEEEEEEEcCCCCceEEEeCCCeeEEEEeCCCCCCEEEEEEEEEeCCccCccee-eEEecccC
Confidence 45678888888874322222233345567999999999999999999999999998875 44555543
No 174
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=99.40 E-value=2.9e-12 Score=107.31 Aligned_cols=96 Identities=27% Similarity=0.478 Sum_probs=78.7
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCC--CCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPET--PNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRV 556 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~--~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V 556 (904)
.|..+|.++.+...++++|.|+|++|.. .+|.+.+|.|.|+..+......|..... ...+++.|.+|+|++.|.|+|
T Consensus 3 ~P~~~P~~~~~~~~s~tsi~v~W~~p~~~~~ng~i~gY~v~y~~~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~v~V 82 (102)
T 3n1f_C 3 TPITGPHIAYTEAVSDTQIMLKWTYIPSSNNNTPIQGFYIYYRPTDSDNDSDYKRDVVEGSKQWHMIGHLQPETSYDIKM 82 (102)
T ss_dssp -CCSCCEEEEEEECSSSCEEEEEECCC-----CCCCEEEEEEEETTCCCGGGCEEEEEETTCSEEEECSCCTTCEEEEEE
T ss_pred CCCCCCceeEEEEcCCCEEEEEeECCChhhcCCccceEEEEEEECCCCCCCceEEEEEcCCceEEECCCCCCCCEEEEEE
Confidence 5678899999999999999999999864 6789999999999876432234554443 556789999999999999999
Q ss_pred EEEeCCCCCCCCCcEEEec
Q psy8771 557 QAFTSVGPGPLSAPVLVKT 575 (904)
Q Consensus 557 ~a~~~~g~~~~S~~~~~~t 575 (904)
+|+|..|.|+.|..+.++|
T Consensus 83 ~A~n~~G~G~~S~~~~~~T 101 (102)
T 3n1f_C 83 QCFNEGGESEFSNVMICET 101 (102)
T ss_dssp EEEETTEECCCCCCEEEEC
T ss_pred EEECCCcCCCCCCCEEeec
Confidence 9999999999999888876
No 175
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=99.40 E-value=2.3e-12 Score=109.96 Aligned_cols=99 Identities=23% Similarity=0.239 Sum_probs=82.3
Q ss_pred CCCCCCCCCCcEEEe--cCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEE
Q psy8771 713 QYVPGAPPQNVSCEP--LSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRI 790 (904)
Q Consensus 713 ~~~p~~~P~~l~~~~--~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 790 (904)
...|. +|.++++.. .+.+++.|+|++|. ..+|.+.+|.|+|+..+...+ .... ...+.++|.+|++++.|.|
T Consensus 5 ~~~P~-~P~~l~~~~~~~~~~sv~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~--~~~~-~~~~~~~l~~L~p~t~Y~~ 78 (108)
T 2dm4_A 5 SSGPD-APRNLQLSLPREAEGVIVGHWAPPI--HTHGLIREYIVEYSRSGSKMW--ASQR-AASNFTEIKNLLVNTLYTV 78 (108)
T ss_dssp CCCTT-SCEEEEEECCTTCSSCEEEEEECCS--CCSSCEEEEEEEEEETTCSCC--EEEE-ESSSEEEECSCCSSCEEEE
T ss_pred CCCCc-CCcCeEEEEeccCCCEEEEEEcCCC--CCCCcEEEEEEEEEECCCCCe--EEec-CCccEEEeCCCCCCCEEEE
Confidence 34565 689998766 58899999999994 678999999999998775433 2222 2677999999999999999
Q ss_pred EEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771 791 WVLAGTSIGDGPSSYPITIRTHEDDPS 817 (904)
Q Consensus 791 ~V~a~~~~g~g~~s~~~~~~t~~~~P~ 817 (904)
+|+|.|..|.|++|+++.++|..+.|+
T Consensus 79 ~V~A~n~~G~g~~S~~~~~~T~~~~P~ 105 (108)
T 2dm4_A 79 RVAAVTSRGIGNWSDSKSITTIKGSGP 105 (108)
T ss_dssp EEEEEESSCEEEECCCEEEECCSCSSC
T ss_pred EEEEECCCceeCCCCCEEEECCCCCCC
Confidence 999999999999999999999877775
No 176
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.39 E-value=3.1e-12 Score=111.77 Aligned_cols=114 Identities=18% Similarity=0.276 Sum_probs=86.8
Q ss_pred CCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEcc-CCCCccEEEEec-CcceEE
Q psy8771 701 GATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETG-RSDSEASIVTLK-NQTSFV 778 (904)
Q Consensus 701 ~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~-~~~~~~~~~~~~-~~~~~~ 778 (904)
+..+......+...+|. +|.++.+...+.+++.|+|.++ ...++++.+|.|+|+... ...+......+. ..+.++
T Consensus 3 ~~~~~~~~~~~~~~~P~-~P~~~~~~~~~~~sv~l~W~p~--~~~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~ 79 (121)
T 1x4z_A 3 SGSSGSQPDHGRLSPPE-APDRPTISTASETSVYVTWIPR--GNGGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVE 79 (121)
T ss_dssp CCCCCCCCCSSSCCCCC-CCCCCEEEECCSSEEEEECCCC--CCTTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEE
T ss_pred cccccceeccCcCCCCc-cCCCCEEEEccCCEEEEEEECC--CCCCCcceEEEEEEEECCCCCceEEeecccCCCcCEEE
Confidence 33343444445555555 6899999999999999999965 456678999999999876 333432222334 788999
Q ss_pred ecCCCCCceEEEEEEEeeCCCCCCCCCcEE-eecCCCCCC
Q psy8771 779 LDELKKWTEYRIWVLAGTSIGDGPSSYPIT-IRTHEDDPS 817 (904)
Q Consensus 779 i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~-~~t~~~~P~ 817 (904)
|.+|.+++.|.|+|+|.|..|.|.+|.... +++.+.+|+
T Consensus 80 v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~v~~~~~~P~ 119 (121)
T 1x4z_A 80 ITGLEKGISYKFRVRALNMLGESEPSAPSRPYVVSGSGPS 119 (121)
T ss_dssp EESCCTTCEEEEEEEEEETTEECCCCCCCCCEECCSSCCC
T ss_pred ECCCCCCCEEEEEEEEEcCCCcCCCcCCCCCEEcCCCCCC
Confidence 999999999999999999999999988764 777776664
No 177
>4doh_B Interleukin-20 receptor subunit beta; IL10 family cytokine receptor complex, alpha helical cytokin beta sandwhich receptor fold, signaling complex; HET: NAG; 2.80A {Homo sapiens}
Probab=99.39 E-value=9.5e-12 Score=119.38 Aligned_cols=178 Identities=15% Similarity=0.157 Sum_probs=127.4
Q ss_pred CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEe-----CCCCCCcceEEEee---cCceEEEEcC-CCCCCeEE
Q psy8771 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQ-----DQSLPMSAWETQVV---DNNQLTTISD-LTPHTIYT 553 (904)
Q Consensus 483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~-L~p~t~Y~ 553 (904)
.+|.|+++...+.. ..|+|+++... .....|.|+|.. .+. ..|..... ...+.+.|.. |..+..|.
T Consensus 8 p~P~nv~~~s~n~~-~iL~W~p~~~~-~~~~~Y~V~y~~~~~~~~~~---~~W~~~~~C~~i~~~~Cdlt~~~~~~~~Y~ 82 (206)
T 4doh_B 8 PAPQQLSVLSTNMK-HLLMWSPVIAP-GETVYYSVEYQGEYESLYTS---HIWIPSSWCSLTEGPECDVTDDITATVPYN 82 (206)
T ss_dssp CCCCCCEEEEETTE-EEEECCCCCCS-SSCCEEEEEEEEHHHHHHST---TCCEEEEEEEEESSSEEECTTTCCSSSCEE
T ss_pred CCCCeeEEEEeCCE-EEEEECCCCCC-CCCEEEEEEEEEeccccCCC---ccceecccccCCCCCEEcCCccccCCCCEE
Confidence 46899999988865 79999997532 234789999984 221 45765432 4567889985 77788999
Q ss_pred EEEEEEeCCCCCCCCCcEEEecCC-CCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEee
Q psy8771 554 IRVQAFTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDI 632 (904)
Q Consensus 554 ~~V~a~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~ 632 (904)
+||+|.++.+.+.|+....+.... ..+. |..+.+.. ...+|.|.|.++.
T Consensus 83 ~RVrA~~~~~~S~w~~~~~f~~~~~t~i~-PP~v~v~~-~~~~i~V~~~~p~---------------------------- 132 (206)
T 4doh_B 83 LRVRATLGSQTSAWSILKHPFNRQSTILT-RPGMEITK-DGFHLVIELEDLG---------------------------- 132 (206)
T ss_dssp EEEEEEETTEECCCEECSSCBCGGGCBCC-CCCEEEEE-ETTEEEEEECCCC----------------------------
T ss_pred EEEEEEcCCCccCccccccccchhhcccC-CCeEEEEe-CCCEEEEEecCCC----------------------------
Confidence 999999988877776544443222 2223 44466664 6778888887652
Q ss_pred ccceEEEeccCCCCCCCceeeEEEEEEeCCccccce--EEecccceEEEeCCCCCcEEEEEEEEEcCC--CCCCCCCCee
Q psy8771 633 QETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHH--RRIGLVETYSLTGLYPNTLYYIWLAAQSPR--GEGATTPPIP 708 (904)
Q Consensus 633 ~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~--~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~--G~~~~s~~~~ 708 (904)
.+..|.|.|+..+...... ........+.|.+|+|++.|.|+|+|+... |.|.+|...-
T Consensus 133 -----------------~~l~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Ycv~Vra~~~~~~~~g~~S~~~C 195 (206)
T 4doh_B 133 -----------------PQFEFLVAYWRREPGAEEHVKMVRSGGIPVHLETMEPGAAYCVKAQTFVKAIGRYSAFSQTEC 195 (206)
T ss_dssp -----------------TTCEEEEEEEESSSSCCCEEEEECCSSSEEEEEECCSSSCEEEEEEEEEGGGTEECCCCCCEE
T ss_pred -----------------CcEEEEEEEEEcCCCceeEEeEEccCCeEEEEeCCCCCCcEEEEEEEEecCCCCCCCCCCCEe
Confidence 3678999998886655432 222335689999999999999999999863 7788888777
Q ss_pred EEec
Q psy8771 709 VRTK 712 (904)
Q Consensus 709 ~~t~ 712 (904)
+.|.
T Consensus 196 ~~t~ 199 (206)
T 4doh_B 196 VEVQ 199 (206)
T ss_dssp ECC-
T ss_pred EEcc
Confidence 7764
No 178
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.39 E-value=2.3e-11 Score=132.59 Aligned_cols=315 Identities=12% Similarity=0.121 Sum_probs=177.8
Q ss_pred CCCCCcEEEeccCCceEEEEeCCCC--------------CCCceecc----cccccccceEEEEeeeccCCee--eeeee
Q psy8771 35 TAPRDVQVRPLSSSTMVIQWDEPET--------------PNGQITHP----PTRAARSHARLAAQSVLRRGRL--AHAVR 94 (904)
Q Consensus 35 ~~p~~l~~~~~~~~s~~v~W~~~~~--------------~~g~i~~~----~~~~~~~~~~~~~~~~~~~g~~--~~~~~ 94 (904)
+....|.|...+.+.++|.|.+... .+|.+... .....|.....|...+. .|.. ..+.+
T Consensus 32 G~~v~l~C~~~g~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~l~i~~~~~~~~~~D~G~Y~C~a~n~-~g~~~s~~~~l 110 (404)
T 3p3y_A 32 RDNILIECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNK-FGTALSNRIRL 110 (404)
T ss_dssp SSCCCCCEEECCSSCCEEEEEETTEECCGGGCSSCBCCSSSCCCBCCCTTTCCTTSSCEEEEEEEECS-SCEEEEEEEEE
T ss_pred CCCEEEEEEecCCCCCeEEEEECCEEeeeecCCcceEecCCceEEEEeccCCCCccCCEEEEEEEEcC-CCeEeeeeEEE
Confidence 3677888888888899999987531 13332221 12222333444444433 3433 23444
Q ss_pred eccCCCCCCCCeEEcC-CCCceEEecCCCeEEEEEE-ccCCCCeEEEeeCCccccCCCCceee-cceEEEEeee--cC-C
Q psy8771 95 QVADPVRRVPPQFSIP-PPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TE-S 168 (904)
Q Consensus 95 ~v~~~~~~~~P~~~~~-~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d-~ 168 (904)
.+. .+|.+... +.. ..+.+|+.+.|.|.+ .|.|.+.|.|++++...+....++.. .++.|.|.++ +| +
T Consensus 111 ~V~-----~~p~~~~~~~~~-~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~ 184 (404)
T 3p3y_A 111 QVS-----KSPLWPKENLDP-VVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQ 184 (404)
T ss_dssp EEC-----CCCCCCCCCCCC-EEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEEECTTSCEEESSCCSGGGS
T ss_pred EEe-----ccCccccCCCCC-eEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEEEcCCCcEEEEeeeeccCC
Confidence 443 33433333 334 889999999999999 89999999999985556665666654 5778999999 57 6
Q ss_pred eEEEEEEEecCcceEE---EEEEEEEeecCCCCCCCC---CCcc-eEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC
Q psy8771 169 ENYTCIAASVLGVIET---STIVKVQCKYAPLLTLPV---APLD-VKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN 241 (904)
Q Consensus 169 g~Y~c~a~n~~g~~~~---~~~l~v~~~~~~~~~~P~---~p~~-l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~ 241 (904)
|.|+|.|.|..|.... ...+.+..........|. ++.. -.........+.|.+...+.+.. .+.|...+..
T Consensus 185 G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~--~v~W~~~~~~ 262 (404)
T 3p3y_A 185 TDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTP--DIAWYKKGGD 262 (404)
T ss_dssp SCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCC--EEEEEETTBC
T ss_pred cceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCC--cEEEEECCEE
Confidence 9999999998886332 234444411100001111 1101 11222334567777766544333 3555544322
Q ss_pred C--CeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEecccCCCeeEEEecCCC
Q psy8771 242 T--PYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPE 319 (904)
Q Consensus 242 ~--~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~ 319 (904)
. ..... ......+.|.++...+.+.|+|.|.|..|....+..+.+...+. ....|.+..+.. ...+.|.+....
T Consensus 263 ~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~-~~~~~~~~~v~~--g~~~~l~C~~~g 338 (404)
T 3p3y_A 263 LPSDKAKF-ENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPY-WLDEPKNLILAP--GEDGRLVCRANG 338 (404)
T ss_dssp CCTTTEEE-EGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEE-EEECCCCEEECT--TCCEEEECEEEE
T ss_pred CCCCcccc-cccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCe-eeccCCcceeec--CCcEEEEEEccc
Confidence 1 11111 12246799999999999999999999988643332233322110 011233333322 234455554332
Q ss_pred CCCceeeEEEEEee-----------ceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771 320 TPNGQITAKHHRRI-----------GLVETYSLTGLYPNTLYYIWLAAQSPRGE 362 (904)
Q Consensus 320 ~~~~~~~~~~~~~~-----------~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~ 362 (904)
.+...+.++..... .....+.|..+.....-.+++.|.|..|.
T Consensus 339 ~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 392 (404)
T 3p3y_A 339 NPKPTVQWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGY 392 (404)
T ss_dssp ESCCEEEEEETTEEGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTEE
T ss_pred cCCCceEEEECCEecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCCc
Confidence 22223333321110 01225788888888888888888887774
No 179
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=3e-12 Score=108.99 Aligned_cols=74 Identities=18% Similarity=0.231 Sum_probs=60.6
Q ss_pred CCCceeeEEEEEEeCCccc-cceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCC
Q psy8771 647 SGENIISYELYWNDTYAKA-KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPP 720 (904)
Q Consensus 647 ~~~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P 720 (904)
.++.+.+|.|+|+...... +..........+.|.+|.|++.|.|+|+|+|..|.|.+|..+.++|...+|..||
T Consensus 32 ~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~~~~S~~~~~~T~~~~P~~Pp 106 (106)
T 2dju_A 32 NSEPVTYYGIQYRAAGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIGRGPPSEAVRARTGEQSGPSSG 106 (106)
T ss_dssp CSSCCSEEEEEEEETTCCSCCCCBCCCCSSEEEEESCCTTCEEEEEEEEECSSCBCCCCCCEEEECCCSSCCCCC
T ss_pred CCCCceEEEEEEEECCCCCCeEEccCCCccEEEEeCCCCCcEEEEEEEEEeCCccCCCcccEEeEcCCCCCCCCC
Confidence 3567899999998876543 3333333567899999999999999999999999999999999999999888765
No 180
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.39 E-value=6e-12 Score=107.46 Aligned_cols=100 Identities=23% Similarity=0.374 Sum_probs=82.4
Q ss_pred cCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEE
Q psy8771 477 KQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRV 556 (904)
Q Consensus 477 ~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V 556 (904)
....| .+|.++++..++.++|.|+|++|...+|.+.+|.|+|+..+......|... ....+.+.|.+|.|++.|.|+|
T Consensus 4 ~~~~P-~~p~~l~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V 81 (109)
T 2e7h_A 4 GSSGP-PAVSDIRVTRSSPSSLSLAWAVPRAPSGAVLDYEVKYHEKGAEGPSSVRFL-KTSENRAELRGLKRGASYLVQV 81 (109)
T ss_dssp SCCSS-CCCCCCEEEEEETTEEEEECCCCCCSSSCCCEEEEEEEETTCCSTTTSEEE-EESSSEEEEESCCTTSCEEEEE
T ss_pred CCCCC-CCCCccEEEecCCCEEEEEeCCCCCCCCcEeEEEEEEEECCCCCCceeEEE-ccCCCEEEECCCCCCCeEEEEE
Confidence 33344 678899999999999999999998888899999999998763222334333 3455689999999999999999
Q ss_pred EEEeCCCCCCCCCcEEEecCCC
Q psy8771 557 QAFTSVGPGPLSAPVLVKTQQG 578 (904)
Q Consensus 557 ~a~~~~g~~~~S~~~~~~t~~~ 578 (904)
+|+|..|.|++|..+.++|...
T Consensus 82 ~A~n~~G~g~~S~~~~~~T~~~ 103 (109)
T 2e7h_A 82 RARSEAGYGPFGQEHHSQTQLD 103 (109)
T ss_dssp EEECSSCBCCCCSCEECCCCCC
T ss_pred EEEeCCccCCCCCCEEEEcCCC
Confidence 9999999999999999888653
No 181
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.39 E-value=4.1e-12 Score=108.75 Aligned_cols=101 Identities=19% Similarity=0.279 Sum_probs=85.3
Q ss_pred CCCCCCCCeEE-EecCCceEEEEecCCCC-CCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEE
Q psy8771 480 EPGTAPRDVQV-RPLSSSTMVIQWDEPET-PNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQ 557 (904)
Q Consensus 480 ~p~~~p~~l~v-~~~~~~~~~l~W~~p~~-~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~ 557 (904)
.+|.+|.++.+ ...+.+++.|+|++|.. .++.+.+|.|+|+.... ..|........+.+.+.+|.+++.|.|+|+
T Consensus 7 ~~P~~P~~~~~~~~~~~~sv~l~W~~P~~~~~~~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~ 83 (110)
T 2crz_A 7 GPPGPCLPPRLQGRPKAKEIQLRWGPPLVDGGSPISCYSVEMSPIEK---DEPREVYQGSEVECTVSSLLPGKTYSFRLR 83 (110)
T ss_dssp CCCCCCCCCEECSCCCSSEEEEECCCCSCCTTSCCCEEEEEEECTTS---CCCEEEEEESCSEEEEESCCTTCEEEECCE
T ss_pred CCCCCCCCceeccccCCCEEEEEeCCCCCCCCceeEEEEEEEEeCCC---CceEEEEeCCcEEEEECCcCCCCEEEEEEE
Confidence 45578999988 56788899999988754 44689999999997643 456666667788899999999999999999
Q ss_pred EEeCCCCCCCCCcEEEecCCCCCCCC
Q psy8771 558 AFTSVGPGPLSAPVLVKTQQGVPSQP 583 (904)
Q Consensus 558 a~~~~g~~~~S~~~~~~t~~~~p~~p 583 (904)
|.|..|.|.+|..+.+.|...+|.+|
T Consensus 84 A~n~~G~g~~S~~~~~~T~~~~P~~P 109 (110)
T 2crz_A 84 AANKMGFGPFSEKCDITTAPGSGPSS 109 (110)
T ss_dssp EECSSCBCCCCCCEEEECCCSCCCCC
T ss_pred EEcCCccCCCCCccccccCCCCCCCC
Confidence 99999999999999999988887766
No 182
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.39 E-value=4.1e-12 Score=109.57 Aligned_cols=102 Identities=24% Similarity=0.386 Sum_probs=83.9
Q ss_pred CCCCCCCCCeEEEecCCceEEEEecCCC--CCCCceeeEEEEEEeCCCCCCcceE-EEeecCceEEEEcCCCCCCeEEEE
Q psy8771 479 YEPGTAPRDVQVRPLSSSTMVIQWDEPE--TPNGQITGYKVYYTQDQSLPMSAWE-TQVVDNNQLTTISDLTPHTIYTIR 555 (904)
Q Consensus 479 ~~p~~~p~~l~v~~~~~~~~~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~p~t~Y~~~ 555 (904)
..|+.+|.++.+..++.++|.|+|++|. ..++.+.+|.|+|+.........|. .......+.+.|.+|.|++.|.|+
T Consensus 6 ~~P~~~P~~~~~~~~~~~si~l~W~~p~~~~~~g~i~gY~v~y~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 85 (114)
T 1x4y_A 6 SGPVAGPYITFTDAVNETTIMLKWMYIPASNNNTPIHGFYIYYRPTDSDNDSDYKKDMVEGDRYWHSISHLQPETSYDIK 85 (114)
T ss_dssp CSCCSCCEEEEEECSSSSCEEEEEECCCTTSCCCCCCEEEEEECCTTSCSGGGCCCEEEETTCCEEEECSCCTTCEEEEE
T ss_pred cCCCCCCeEEEEEecCCCEEEEEEeCCCchhcCCccceEEEEEEECCCCCCcceeeEecCCcEeEEEcCCCCCCCEEEEE
Confidence 4677899999999999999999999985 4678999999999876543222332 233355678999999999999999
Q ss_pred EEEEeCCCCCCCCCcEEEecCCCCC
Q psy8771 556 VQAFTSVGPGPLSAPVLVKTQQGVP 580 (904)
Q Consensus 556 V~a~~~~g~~~~S~~~~~~t~~~~p 580 (904)
|+|+|..|.|++|..+.++|....+
T Consensus 86 V~A~n~~G~g~~S~~v~~~T~~~~~ 110 (114)
T 1x4y_A 86 MQCFNEGGESEFSNVMICETKARSG 110 (114)
T ss_dssp EEEECTTCCCCCCCCEEEECCCCCC
T ss_pred EEEEcCCccCCCcCCEEEEeCCCCC
Confidence 9999999999999999999976543
No 183
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.39 E-value=1.3e-11 Score=134.04 Aligned_cols=167 Identities=15% Similarity=0.184 Sum_probs=112.0
Q ss_pred CCCCCCeEEcCCCCceEEecCCCeEEEEEEcc-CCCCeEEEeeCCccccCCCC-ce--eecceEEEEeee--cCCeEEEE
Q psy8771 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPMPFVKWRKGQNIELTPDD-KL--PVGRNVLTLDRV--TESENYTC 173 (904)
Q Consensus 100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p~i~W~k~~~~~~~~~~-~~--~~~~~~l~i~~l--~d~g~Y~c 173 (904)
.+..||.|...|.+ +.+.+|+.++|.|.+.| .|.+.|+|+|+ +..+.... ++ ...+++|.|.++ +|+|.|+|
T Consensus 2 ~v~~~P~~~~~p~~-~~v~~G~~v~l~C~~~~~~p~~~v~W~k~-g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 79 (395)
T 1bih_A 2 PVDKYPVLKDQPAE-VLFRENNPTVLECIIEGNDQGVKYSWKKD-GKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQC 79 (395)
T ss_dssp ---CCCEECCCCSE-EEEETTSCEEECCCEESCCSSCEEEEEES-SSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEE
T ss_pred CcCCCCEeecCCCc-eEEeCCCEEEEEEEEecCCCCceEEEEEC-CcCcccccceEEEecCCceEEEecCCCCCCcEEEE
Confidence 35789999999988 99999999999999999 89999999999 66665443 22 236789999999 69999999
Q ss_pred EEEecCcceE-EEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC-CccceEEEEEEEeCC--C---------
Q psy8771 174 IAASVLGVIE-TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKA--A--------- 240 (904)
Q Consensus 174 ~a~n~~g~~~-~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~-~~~~~~y~v~~~~~~--~--------- 240 (904)
.|.|..|... ..+.|.+..... ++..|.+ ........++|.|... +.+.. .+.|...+ .
T Consensus 80 ~a~n~~g~~~s~~~~l~v~~~~~----p~~~~~~--~~~~~G~~v~l~C~~~~~~p~~--~v~W~~~~~~~~~~~~~~~~ 151 (395)
T 1bih_A 80 FAETPAGVASSRVISFRKTYLIA----SPAKTHE--KTPIEGRPFQLDCVLPNAYPKP--LITWKKRLSGADPNADVTDF 151 (395)
T ss_dssp EEEETTEEEECCCEEEEEEEEEC----CCCEEEE--ECCBTTEEEEECCCCCEEESCC--EEEEEEEETTSCGGGCCCCC
T ss_pred EEEeCCCeEEeEEEEEEEEEeec----CCcCCcc--eeeeeCCcEEEEecCCCCCCCC--eEEEEecCCCcCcccccccc
Confidence 9999988754 335566552111 1111212 2223455778888753 22222 23333321 0
Q ss_pred CCCeEEeecceeceEEEcCCCCCCeE---EEEEEEEcCCCCC
Q psy8771 241 NTPYSEISGIITTYYTVRNLSPYTEY---EFYIIAVNNLGRG 279 (904)
Q Consensus 241 ~~~~~~~~~~~~~~~~i~~L~p~~~Y---~~~v~a~n~~g~s 279 (904)
...+. . .....+.|.++...+.+ .|+|.|.|..|..
T Consensus 152 ~~~~~-~--~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~ 190 (395)
T 1bih_A 152 DRRIT-A--GPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDE 190 (395)
T ss_dssp CTTEE-E--CTTSCEEEEEECGGGCCSSEEEEEEEECTTCSS
T ss_pred cccEE-E--cCCCcEEEEEEeeccCCCceEEEEEEEecccce
Confidence 11111 1 12346899999998888 9999999998864
No 184
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.38 E-value=4e-12 Score=108.52 Aligned_cols=100 Identities=19% Similarity=0.301 Sum_probs=78.9
Q ss_pred cCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeE
Q psy8771 575 TQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISY 654 (904)
Q Consensus 575 t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y 654 (904)
|....|.+|.++++...+.+++.|+|.+|.. .++.+.+|
T Consensus 3 T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~-----------------------------------------~~g~i~~Y 41 (108)
T 2djs_A 3 SGSSGPSTVPIMHQVSATMRSITLSWPQPEQ-----------------------------------------PNGIILDY 41 (108)
T ss_dssp SCCCCCCCCSCCEEEEECSSEEEEECCCCSC-----------------------------------------CSSCEEEE
T ss_pred cCCCCCCCCcceEEEecCCCEEEEEECCCCC-----------------------------------------CCCeEEEE
Confidence 4455667777777777777777777777754 56778899
Q ss_pred EEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCC
Q psy8771 655 ELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYV 715 (904)
Q Consensus 655 ~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~ 715 (904)
.|+|+..+...+ ..........+.|.+|+|++.|.|+|+|+|..|.|.+|..+.++|.+..
T Consensus 42 ~v~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 103 (108)
T 2djs_A 42 EIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKFSGKMCFQTLTDS 103 (108)
T ss_dssp EEEEEETTSCSTTCEEEEESSSEEEEESCCTTCEEEEEEEEEESSCEEEECCCEEEECCCSS
T ss_pred EEEEEECCCCCcceeEEecCccEEEEcCCCCCCEEEEEEEEEeCCEECCCCCCEEEEeCCCC
Confidence 999988765544 2334456689999999999999999999999999999999999997653
No 185
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.38 E-value=5.7e-12 Score=134.92 Aligned_cols=214 Identities=10% Similarity=0.035 Sum_probs=132.5
Q ss_pred eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEe
Q psy8771 115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQC 192 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~ 192 (904)
..+.+|++++|.|.+.|.|.|.|+|+|+ +.. +......|.|.++ +|+|.|+|.|.|..+..+....|.|.
T Consensus 106 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~------~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~- 177 (363)
T 1wio_A 106 THLLQGQSLTLTLESPPGSSPSVQCRSP-RGK------NIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL- 177 (363)
T ss_dssp SSEESBSCEEEEEECCTTCCCCEEEECS-SSC------EEEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEE-
T ss_pred eEEecCCCEEEEEEcCCCCCCeEEEEcC-CCc------ccccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEe-
Confidence 4568999999999999999999999999 432 3346789999999 69999999999988777777777777
Q ss_pred ecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCc--c-ceEEEEEEEeCCCC------------CCeEEee---------
Q psy8771 193 KYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE--T-LLYYVIQYKPKAAN------------TPYSEIS--------- 248 (904)
Q Consensus 193 ~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~--~-~~~y~v~~~~~~~~------------~~~~~~~--------- 248 (904)
..|..|..+.+. ....++|.+...+. . .....+.|...+.. ..+....
T Consensus 178 ------~~p~~~~~~~~~--~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (363)
T 1wio_A 178 ------AFQKASSIVYKK--EGEQVEFSFPLAFTVEKLTGSGELWWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQM 249 (363)
T ss_dssp ------CCSCSEEEEEEE--TBCCEEEECCCCCCCCSSCEEEEEEEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBC
T ss_pred ------cCCCCCCceEEe--cCCEEEEEEEEecccccCCCceeEEEecCCCCccceEEEEEecCCeeeccccccchhhhc
Confidence 555555433332 23455566643321 1 12234455443321 1111110
Q ss_pred -cceeceEEEcCCCCCCeEEEEEEEEcC--CCCCCCCCCeEEecCCCCCCCCCCceEecccCC--CeeEEEecCCCCCCc
Q psy8771 249 -GIITTYYTVRNLSPYTEYEFYIIAVNN--LGRGPPSSPAVITTGETEPGTAPRDVQVRPLSS--STMVIQWDEPETPNG 323 (904)
Q Consensus 249 -~~~~~~~~i~~L~p~~~Y~~~v~a~n~--~g~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~--~~v~l~W~~p~~~~~ 323 (904)
......+.|.++...+.+.|+|.|.|. .|.......+.+... ...+..|.+...+. ..+.+.|......-.
T Consensus 250 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v----~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~ 325 (363)
T 1wio_A 250 GKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRA----TQLQKNLTCEVWGPTSPKLMLSLKLENKEAK 325 (363)
T ss_dssp CSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEE----CCCSSSEEEEEESSCCTTCCEEEECSSSSCS
T ss_pred ccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEe----cCCCeeEEEEEccccCCCccEEEEeCCCcee
Confidence 111348999999999999999999999 775432222333211 23445666554433 345588886543221
Q ss_pred eeeEEEEEeeceeEEEEEcCCCCCcEEEEEEEEEcC
Q psy8771 324 QITAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP 359 (904)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~ 359 (904)
. ...+.|..+.....-.+++.|.+.
T Consensus 326 ~-----------~~~l~i~~v~~~d~G~Y~C~a~~~ 350 (363)
T 1wio_A 326 V-----------SKREKAVWVLNPEAGMWQCLLSDS 350 (363)
T ss_dssp E-----------EESSSEEEESSCCSEEEEEEECSS
T ss_pred e-----------eeeeeeeeeccccceeEEEEEecC
Confidence 1 112344555555666666676654
No 186
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.38 E-value=4e-12 Score=132.40 Aligned_cols=173 Identities=16% Similarity=0.235 Sum_probs=109.5
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee---c---ceEEEEeee---cCCeEE
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV---G---RNVLTLDRV---TESENY 171 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~---~---~~~l~i~~l---~d~g~Y 171 (904)
...||.|...|.+ +.+.+|+.+.|.|.+.|.|.+.|+|+|+ +..+... ++.. . ...|.|.++ +|+|.|
T Consensus 3 ~~~~P~~~~~p~~-~~v~~G~~v~l~C~~~g~p~~~i~W~k~-g~~i~~~-~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y 79 (304)
T 2yd9_A 3 GEEPPRFIKEPKD-QIGVSGGVASFVCQATGDPKPRVTWNKK-GKKVNSQ-RFETIEFDESAGAVLRIQPLRTPRDENVY 79 (304)
T ss_dssp -CCCCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEC--------CT-TEEEEEETTTTEEEEEECSCCTTTTCSEE
T ss_pred CccCCeeeecCCc-eEecCCCeEEEEEEEEEeCCCeEEEEEC-CEECCCC-ceEEEEecCCCceEEEEecccccCCCeEE
Confidence 3678999999998 9999999999999999999999999999 6666433 3322 2 257999987 589999
Q ss_pred EEEEEecCcceEEEEEEEEEeecCCCCCCC---CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe----
Q psy8771 172 TCIAASVLGVIETSTIVKVQCKYAPLLTLP---VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY---- 244 (904)
Q Consensus 172 ~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P---~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~---- 244 (904)
+|.|.|..|..+..+.|.|..........| ..|....+ .....+.|.+...+.+.. .+.|...+.....
T Consensus 80 ~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v--~~g~~v~l~C~~~g~p~~--~v~W~k~~~~~~~~~~~ 155 (304)
T 2yd9_A 80 ECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVV--ERTRTATMLCAASGNPDP--EITWFKDFLPVDPSASN 155 (304)
T ss_dssp EEEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEE--ETTSCEEECCEEECSSCC--EEEEEETTEECCGGGGT
T ss_pred EEEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEE--eCCCeEEEEEECccCCCC--eEEEEECCEECcCCCCc
Confidence 999999999988888898883211000001 01222222 223455555554322222 2444433211000
Q ss_pred EEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 245 SEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 245 ~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
..........+.|.++...+.+.|+|.|.|..|...
T Consensus 156 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 191 (304)
T 2yd9_A 156 GRIKQLRSGALQIESSEETDQGKYECVATNSAGVRY 191 (304)
T ss_dssp TSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred ceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEE
Confidence 001112234799999999999999999999988643
No 187
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=4e-12 Score=108.10 Aligned_cols=99 Identities=22% Similarity=0.307 Sum_probs=78.9
Q ss_pred CCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEE
Q psy8771 577 QGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYEL 656 (904)
Q Consensus 577 ~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v 656 (904)
...|.+|.++++..++.+++.|+|.++.. .++.+.+|+|
T Consensus 5 ~~~P~~P~~l~~~~~~~~si~l~W~~p~~-----------------------------------------~~g~i~~Y~v 43 (106)
T 2ed8_A 5 SSGPGPVENLQAVSTSPTSILITWEPPAY-----------------------------------------ANGPVQGYRL 43 (106)
T ss_dssp CCCCCCCEEEEEECSSTTEEEEEEECCSS-----------------------------------------CSSCCCEEEE
T ss_pred CCCCcCCceeEEEecCCCEEEEEECCCCC-----------------------------------------CCCCeeEEEE
Confidence 34667777777777777788888877754 5667888999
Q ss_pred EEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCC
Q psy8771 657 YWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPG 717 (904)
Q Consensus 657 ~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~ 717 (904)
+|+..+...+.... ...+++.|.+|+|++.|.|+|+|+|..|.|.+|..+.++|.+..|.
T Consensus 44 ~~~~~~~~~~~~~~-~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~P~ 103 (106)
T 2ed8_A 44 FCTEVSTGKEQNIE-VDGLSYKLEGLKKFTEYSLRFLAYNRYGPGVSTDDITVVTLSDSGP 103 (106)
T ss_dssp EEEETTTCCEEEEE-ECSSCEEEESCCTTCEEEEEEEEECSSCEEEECCCEEEECCCCCCC
T ss_pred EEEECCCCceEEEe-CCccEEEECCCCCCCEEEEEEEEEeCCccCCCcCCEEEEcCCCCCC
Confidence 88877655443332 3468999999999999999999999999999999999999988755
No 188
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.38 E-value=4.4e-12 Score=108.43 Aligned_cols=101 Identities=17% Similarity=0.220 Sum_probs=85.0
Q ss_pred CCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771 481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF 559 (904)
Q Consensus 481 p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~ 559 (904)
++.+|..+.+...+.+++.|+|.+|.+.++ .+.+|.|+|+..... ..|........+.+.+.+|.+++.|.|+|+|+
T Consensus 7 ~P~~P~~p~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~--~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~ 84 (109)
T 1x5x_A 7 GPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEETSG--YGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAY 84 (109)
T ss_dssp CCCCCCCCEEEEECSSEEEEECCCCSSCCSSSSCEEEEEECCSSSS--CCCEEEEEESCSEEEEESCCSSCEEEEEEEEE
T ss_pred CCcCCCCCEEEEccCCEEEEEEcCCCCCCCCcccEEEEEEecCCCC--cceEEeEeCCccEEEECCCCCCCEEEEEEEEE
Confidence 446777788889999999999999987777 789999999876532 34655555667889999999999999999999
Q ss_pred eCCCCCCCCCcEEEecCCCCCCCC
Q psy8771 560 TSVGPGPLSAPVLVKTQQGVPSQP 583 (904)
Q Consensus 560 ~~~g~~~~S~~~~~~t~~~~p~~p 583 (904)
|..|.|.+|..+.+.|....|.+|
T Consensus 85 n~~G~s~~S~~~~~~T~~~~P~~p 108 (109)
T 1x5x_A 85 NSEGKSNPSEVVEFTTCPDSGPSS 108 (109)
T ss_dssp CSSCEEEECCCEEEECCCCCCCCC
T ss_pred eCCCCcCCccCEEeEeCCCCCCCC
Confidence 999999999999999987777655
No 189
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.38 E-value=4.6e-12 Score=108.47 Aligned_cols=104 Identities=17% Similarity=0.205 Sum_probs=82.1
Q ss_pred cCCCCCCCCCCceE-EecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceee
Q psy8771 575 TQQGVPSQPRDLRA-VDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIIS 653 (904)
Q Consensus 575 t~~~~p~~p~~~~~-~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~ 653 (904)
|....|.+|.++.+ ...+.+++.|+|.++.. .+++.+.+
T Consensus 4 t~~~~P~~P~~~~~~~~~~~~sv~l~W~~P~~----------------------------------------~~~~~i~~ 43 (110)
T 2crz_A 4 GSSGPPGPCLPPRLQGRPKAKEIQLRWGPPLV----------------------------------------DGGSPISC 43 (110)
T ss_dssp SCCCCCCCCCCCEECSCCCSSEEEEECCCCSC----------------------------------------CTTSCCCE
T ss_pred CcCCCCCCCCCceeccccCCCEEEEEeCCCCC----------------------------------------CCCceeEE
Confidence 34456677777777 45666778888876643 14567899
Q ss_pred EEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCC
Q psy8771 654 YELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGA 718 (904)
Q Consensus 654 y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~ 718 (904)
|.|+|+......+..........++|.+|.+++.|.|+|+|+|..|.|.+|..+.+.|...+|..
T Consensus 44 Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~g~~S~~~~~~T~~~~P~~ 108 (110)
T 2crz_A 44 YSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAANKMGFGPFSEKCDITTAPGSGPS 108 (110)
T ss_dssp EEEEEECTTSCCCEEEEEESCSEEEEESCCTTCEEEECCEEECSSCBCCCCCCEEEECCCSCCCC
T ss_pred EEEEEEeCCCCceEEEEeCCcEEEEECCcCCCCEEEEEEEEEcCCccCCCCCccccccCCCCCCC
Confidence 99999877666665555566789999999999999999999999999999999999998887763
No 190
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.37 E-value=5.6e-12 Score=111.29 Aligned_cols=118 Identities=19% Similarity=0.333 Sum_probs=90.6
Q ss_pred CCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee--cCceEEEEc
Q psy8771 467 ATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV--DNNQLTTIS 544 (904)
Q Consensus 467 ~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 544 (904)
..+....+... .+|.+|.++.+...+.+++.|+|.++.+.++.+.+|.|+|+..... ...|..... ...+. .+.
T Consensus 4 ~~s~~~~~~v~--~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~-~~~w~~~~~~~~~~~~-~i~ 79 (127)
T 1uey_A 4 GSSGPTPAPVY--DVPNPPFDLELTDQLDKSVQLSWTPGDDNNSPITKFIIEYEDAMHK-PGLWHHQTEVSGTQTT-AQL 79 (127)
T ss_dssp CCCCCCCCCCC--CSCCCCEEEEEECCSSSCEEEEEECCCCCSSCEEEEEEEEEBTTTC-TTCEEEEEEEESSCCE-EEE
T ss_pred CCcEEEEEEee--cCCcCCCCcEEEEccCCEEEEEEECCCCCCCCceEEEEEEEECCCC-CCccEEEeeeCCCceE-EEe
Confidence 33444444333 3557999999999999999999999877778999999999876432 245655432 34444 577
Q ss_pred CCCCCCeEEEEEEEEeCCCCCCCCCc-EEEecCCCCCC-CCCCceE
Q psy8771 545 DLTPHTIYTIRVQAFTSVGPGPLSAP-VLVKTQQGVPS-QPRDLRA 588 (904)
Q Consensus 545 ~L~p~t~Y~~~V~a~~~~g~~~~S~~-~~~~t~~~~p~-~p~~~~~ 588 (904)
+|.|++.|.|+|+|+|..|.|.+|.. ..++|....|. +|.++.+
T Consensus 80 ~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~P~~~P~~v~~ 125 (127)
T 1uey_A 80 NLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGPS 125 (127)
T ss_dssp CCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSSCSSCSSCCCC
T ss_pred cCCCCCEEEEEEEEEeCCccCCccccccceEcCCCCCCCCCceeEe
Confidence 99999999999999999999999988 47888888875 5777765
No 191
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.37 E-value=1.3e-11 Score=120.75 Aligned_cols=171 Identities=16% Similarity=0.206 Sum_probs=115.3
Q ss_pred CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccc------------cCCCCceeecceEEEEeee--cCCeE
Q psy8771 105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIE------------LTPDDKLPVGRNVLTLDRV--TESEN 170 (904)
Q Consensus 105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~------------~~~~~~~~~~~~~l~i~~l--~d~g~ 170 (904)
+.|...+.+ +.+.+|+++.|.|.+.|.|.+.|.|+|+ +.. .....|+......|.|.++ +|+|.
T Consensus 2 ~~v~~~~~~-~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~ 79 (212)
T 1f97_A 2 GSVYTAQSD-VQVPENESIKLTCTYSGFSSPRVEWKFV-QGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGE 79 (212)
T ss_dssp CEEECSCSE-EEEETTCCEEEECEEESCSSEEEEEEEE-ETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEE
T ss_pred ceEEecCCC-eEEEcCCCEEEEeEeCCCCCcEEEEEEC-CCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeE
Confidence 456666777 9999999999999999999999999998 433 2234566666789999999 69999
Q ss_pred EEEEEEecCc--ceEEEEEEEEEeecCCCCCCCCCC---cceEEEeecCCeEEEEEe-CCCccceEEEEEEEeCCC-CCC
Q psy8771 171 YTCIAASVLG--VIETSTIVKVQCKYAPLLTLPVAP---LDVKISEVTATSVRLDWT-YPSETLLYYVIQYKPKAA-NTP 243 (904)
Q Consensus 171 Y~c~a~n~~g--~~~~~~~l~v~~~~~~~~~~P~~p---~~l~~~~~~~~sv~l~W~-~~~~~~~~y~v~~~~~~~-~~~ 243 (904)
|+|.|.|..| ..+....|.|. ..|..+ ....+ .....++|.+. ..+.+.. .+.|...+. ...
T Consensus 80 Y~C~~~~~~g~~~~~~~~~l~V~-------~~p~~~~~~~~~~~--~~g~~~~l~C~~~~~~p~~--~i~W~~~~~~~l~ 148 (212)
T 1f97_A 80 YTCMVSEEGGQNYGEVSIHLTVL-------VPPSKPTISVPSSV--TIGNRAVLTCSEHDGSPPS--EYSWFKDGISMLT 148 (212)
T ss_dssp EEEEEEETTSSSEEEEEEEEEEE-------BCCCCCEEECCSEE--ETTSCEEEEEECSCCBSCC--EEEEEETTEESBC
T ss_pred EEEEEEccCCCcccEEEEEEEEE-------cCCCCcccCCcccc--CCCCeEEEEEEcccCcCCC--EEEEEeCCccccc
Confidence 9999999877 45666777776 333222 11222 23456777777 3333333 244444322 111
Q ss_pred e-----------EEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEe
Q psy8771 244 Y-----------SEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT 288 (904)
Q Consensus 244 ~-----------~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~ 288 (904)
. ..........+.|.++...+.+.|+|.|.|..|....+..+.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~ 204 (212)
T 1f97_A 149 ADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMD 204 (212)
T ss_dssp -----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEE
T ss_pred ccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEE
Confidence 0 00111234679999999999999999999999976334444443
No 192
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.37 E-value=4.3e-12 Score=112.04 Aligned_cols=106 Identities=23% Similarity=0.333 Sum_probs=82.4
Q ss_pred CCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEE
Q psy8771 578 GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELY 657 (904)
Q Consensus 578 ~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~ 657 (904)
..|.+|.++.+..++.+++.|+|.++.+ +++.+.+|.|+
T Consensus 15 ~~P~~P~~~~~~~~~~~sv~l~W~p~~~-----------------------------------------~~~~i~~Y~v~ 53 (127)
T 1uey_A 15 DVPNPPFDLELTDQLDKSVQLSWTPGDD-----------------------------------------NNSPITKFIIE 53 (127)
T ss_dssp CSCCCCEEEEEECCSSSCEEEEEECCCC-----------------------------------------CSSCEEEEEEE
T ss_pred cCCcCCCCcEEEEccCCEEEEEEECCCC-----------------------------------------CCCCceEEEEE
Confidence 4677888888888888889999987754 56678888888
Q ss_pred EEeCCc--cccceEE--ecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCC-eeEEecCCCCCCCCCCcEE
Q psy8771 658 WNDTYA--KAKHHRR--IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPP-IPVRTKQYVPGAPPQNVSC 725 (904)
Q Consensus 658 ~~~~~~--~~~~~~~--~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~-~~~~t~~~~p~~~P~~l~~ 725 (904)
|+.... ..+.... ....+. .+.+|.|++.|.|+|+|+|..|.|.+|.. ..++|...+|..+|.+|.+
T Consensus 54 ~~~~~~~~~~w~~~~~~~~~~~~-~i~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~T~~~~P~~~P~~v~~ 125 (127)
T 1uey_A 54 YEDAMHKPGLWHHQTEVSGTQTT-AQLNLSPYVNYSFRVMAVNSIGKSLPSEASEQYLTKASEPDKNPTSGPS 125 (127)
T ss_dssp EEBTTTCTTCEEEEEEEESSCCE-EEECCCTTCEECCEEEEEESSCBCCCCSCCCCEECCCSSCSSCSSCCCC
T ss_pred EEECCCCCCccEEEeeeCCCceE-EEecCCCCCEEEEEEEEEeCCccCCccccccceEcCCCCCCCCCceeEe
Confidence 887642 2232221 223334 57899999999999999999999999987 4899999999888988865
No 193
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=99.37 E-value=3.2e-11 Score=116.39 Aligned_cols=126 Identities=19% Similarity=0.282 Sum_probs=89.0
Q ss_pred cceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEec-CCCEEEEEecCCCCCCCCccEEEE
Q psy8771 674 VETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL-SSTSIRISWEPPPVERSNGHIVYY 752 (904)
Q Consensus 674 ~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~-~~~~v~l~W~~~~~~~~~g~~~~Y 752 (904)
...+.+..|...+.|.|+|.|.|..|.+. |..+.+.....+.+.||.++.+... ..+++.|+|++|.. .. ....|
T Consensus 68 ~~~C~~~~~~~~~~Y~~~V~a~N~~G~~~-s~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~--~~-~~l~y 143 (206)
T 3v6o_A 68 FYECIFQPIFLLSGYTMWIRINHSLGSLD-SPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVF--PE-NNLQF 143 (206)
T ss_dssp CEEEEECSCCTTSCEEEEEEEC---CCEE-CCCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC-----------CEEE
T ss_pred CceEEeCcHHhcccEEEEEEEEcCCcccc-CCcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCC--CC-CcEEE
Confidence 34788888988999999999999988765 5567776666666668999998765 68899999999843 22 35899
Q ss_pred EEEEEEccC-CCCccEEEEec--CcceEEecCCCCCceEEEEEEEeeCCCCCCCCC
Q psy8771 753 KLQFVETGR-SDSEASIVTLK--NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSY 805 (904)
Q Consensus 753 ~v~~~~~~~-~~~~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~ 805 (904)
+|+|+..+. ..+ ...... ....+.+.+|+|++.|.|+|||.+..|.|.+|+
T Consensus 144 ev~y~~~~~~~~w--~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSe 197 (206)
T 3v6o_A 144 QIRYGLSGKEVQW--KMYEVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSN 197 (206)
T ss_dssp EEEEEESSSSCCC--EEEEECC---CEEEECCSCTTSCEEEEEEEEETTSCSCCCC
T ss_pred EEEEEECCCCCce--EEEecccCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCC
Confidence 999998763 233 233332 345789999999999999999999877776654
No 194
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=99.37 E-value=6.3e-12 Score=107.22 Aligned_cols=98 Identities=32% Similarity=0.497 Sum_probs=83.6
Q ss_pred CCCCCCeEEEe--cCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771 482 GTAPRDVQVRP--LSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF 559 (904)
Q Consensus 482 ~~~p~~l~v~~--~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~ 559 (904)
|.+|.++++.. .+.+++.|+|++|.+.++.+.+|.|+|+.... ..|.... ...+.+.|.+|.|++.|.|+|+|+
T Consensus 8 P~~P~~l~~~~~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~---~~~~~~~-~~~~~~~l~~L~p~t~Y~~~V~A~ 83 (108)
T 2dm4_A 8 PDAPRNLQLSLPREAEGVIVGHWAPPIHTHGLIREYIVEYSRSGS---KMWASQR-AASNFTEIKNLLVNTLYTVRVAAV 83 (108)
T ss_dssp TTSCEEEEEECCTTCSSCEEEEEECCSCCSSCEEEEEEEEEETTC---SCCEEEE-ESSSEEEECSCCSSCEEEEEEEEE
T ss_pred CcCCcCeEEEEeccCCCEEEEEEcCCCCCCCcEEEEEEEEEECCC---CCeEEec-CCccEEEeCCCCCCCEEEEEEEEE
Confidence 46899998766 57899999999998778899999999998764 3455543 345689999999999999999999
Q ss_pred eCCCCCCCCCcEEEecCCCCCCCC
Q psy8771 560 TSVGPGPLSAPVLVKTQQGVPSQP 583 (904)
Q Consensus 560 ~~~g~~~~S~~~~~~t~~~~p~~p 583 (904)
|..|.|++|..+.++|....|.+|
T Consensus 84 n~~G~g~~S~~~~~~T~~~~P~~p 107 (108)
T 2dm4_A 84 TSRGIGNWSDSKSITTIKGSGPSS 107 (108)
T ss_dssp ESSCEEEECCCEEEECCSCSSCCC
T ss_pred CCCceeCCCCCEEEECCCCCCCCC
Confidence 999999999999999988887765
No 195
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.37 E-value=4.2e-12 Score=109.72 Aligned_cols=89 Identities=22% Similarity=0.408 Sum_probs=76.6
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCceee--c-ce--EEEEeee--cCCeEEE
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPV--G-RN--VLTLDRV--TESENYT 172 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~--~-~~--~l~i~~l--~d~g~Y~ 172 (904)
...+|.|+..|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+.. ..++.+ + .+ +|.|.++ +|+|.|+
T Consensus 12 ~~~~p~f~~~p~~-~~v~~G~~v~L~C~~~g~p~p~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (116)
T 2kkq_A 12 HKRAPMFIYKPQS-KKVLEGDSVKLECQISAIPPPKLFWKRN-NEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYT 89 (116)
T ss_dssp CCBCCCBSSCCCC-EEEETTEEEEEEEEBCCBSCCEEEEEET-TEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEE
T ss_pred CCCCCeEEeCCCc-EEEeCCCcEEEEEEEeccCCCEEEEEEC-CEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEE
Confidence 3568999999999 9999999999999999999999999999 655543 455553 1 12 8999999 6999999
Q ss_pred EEEEecCcceEEEEEEEEE
Q psy8771 173 CIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 173 c~a~n~~g~~~~~~~l~v~ 191 (904)
|.|.|..|..+..+.|.|.
T Consensus 90 C~a~N~~G~~~~~~~l~V~ 108 (116)
T 2kkq_A 90 VSAVNEAGVTTCNTRLDVT 108 (116)
T ss_dssp EEEEETTEEEEEEEEEEEE
T ss_pred EEEEcCCCeEEEEEEEEEe
Confidence 9999999999999999998
No 196
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.36 E-value=1.5e-12 Score=111.32 Aligned_cols=100 Identities=23% Similarity=0.306 Sum_probs=81.3
Q ss_pred CCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCcc----EEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceE
Q psy8771 714 YVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH----IVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEY 788 (904)
Q Consensus 714 ~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~----~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y 788 (904)
..|..+|.+|++..++.++|.|+|.+|.. .++. +.+|.|+|+...... .....+. ..+.++|.||+|++.|
T Consensus 6 ~~pp~~P~~l~~~~~s~tsi~lsW~~p~~--~~~~~~~~~~~Y~v~y~~~~~~~--~~~~~~~~~~~~~~i~gL~P~T~Y 81 (113)
T 1x5j_A 6 SGPMMPPVGVQASILSHDTIRITWADNSL--PKHQKITDSRYYTVRWKTNIPAN--TKYKNANATTLSYLVTGLKPNTLY 81 (113)
T ss_dssp CCCCCCCEEEEEEEEETTEEEEEEECTTS--CSSSCCCSSCEEEEEECBSSSSS--CCCEECCBCSSEEEEESCCTTCEE
T ss_pred CCCCCCCcceEEEEecCCEEEEEecCCCC--ccccccCcCceEEEEEEECCCCC--eEEEEEecCcCEEEeCCCCCCcEE
Confidence 34666899999999999999999999853 3333 459999998742222 2233444 7889999999999999
Q ss_pred EEEEEEeeCCCCCCCCCcEEeecCCC-CCC
Q psy8771 789 RIWVLAGTSIGDGPSSYPITIRTHED-DPS 817 (904)
Q Consensus 789 ~~~V~a~~~~g~g~~s~~~~~~t~~~-~P~ 817 (904)
.|+|+|.+..|.|++|..+.++|.++ +|+
T Consensus 82 ~f~V~A~~~~G~g~~S~~v~~~T~~~~~Ps 111 (113)
T 1x5j_A 82 EFSVMVTKGRRSSTWSMTAHGTTFELSGPS 111 (113)
T ss_dssp CCEEEEECSSCBCCCCCCCCEECCCSSCCC
T ss_pred EEEEEEecCCccCCCcccEEeeccCCCCCC
Confidence 99999999999999999999999998 885
No 197
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.36 E-value=6.2e-12 Score=107.58 Aligned_cols=101 Identities=17% Similarity=0.275 Sum_probs=81.4
Q ss_pred cCCCCCCCCCCeEEEecCCceEEEEecCCCCCC---C-c-eeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCe
Q psy8771 477 KQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPN---G-Q-ITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTI 551 (904)
Q Consensus 477 ~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~---~-~-i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~ 551 (904)
....|+.+|..+.+..++.+++.|+|++|.+.+ + . |.+|.|+. ... ....|........+.+++.+|.|++.
T Consensus 11 ~~~~pp~~P~~p~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~-~~~--~~~~~~~v~~~~~t~~~v~gL~p~t~ 87 (120)
T 1wfu_A 11 HKVVPLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEE-EDP--KMHSYGVIYTGYATRHVVEGLEPRTL 87 (120)
T ss_dssp TTCCCCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEE-ECT--TTCCEEEEEEESCSEEEEESCCTTCE
T ss_pred EeeCCCCCCCCceeceEECCEEEEEECCCccCCccCCCCceEEEEEEE-ecC--CCCceEEEecCCccEEEECCCCCCCE
Confidence 334566777777788889999999999998765 3 4 89999994 332 23667777666677899999999999
Q ss_pred EEEEEEEEeCCCCCCCCCcEEEecCCCCC
Q psy8771 552 YTIRVQAFTSVGPGPLSAPVLVKTQQGVP 580 (904)
Q Consensus 552 Y~~~V~a~~~~g~~~~S~~~~~~t~~~~p 580 (904)
|.|+|+|.|..|.|.+|..+.+.|...++
T Consensus 88 Y~frV~A~n~~G~s~~S~~~~~~T~~~p~ 116 (120)
T 1wfu_A 88 YKFRLKVTSPSGEYEYSPVVSVATTRESG 116 (120)
T ss_dssp EEEEEEEECSSSCEEECCCEEEECCCCCC
T ss_pred EEEEEEEECCCCCCCCCccEeeEcCCCCC
Confidence 99999999999999999999999876543
No 198
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.36 E-value=4e-12 Score=107.58 Aligned_cols=90 Identities=16% Similarity=0.212 Sum_probs=78.7
Q ss_pred CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEE
Q psy8771 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTC 173 (904)
Q Consensus 100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c 173 (904)
.+..+|.|...+.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.+. ...|.|.++ +|+|.|+|
T Consensus 4 ~~~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~i~W~k~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 81 (103)
T 3qp3_A 4 TLDHAPRITLRMRS-HRVPCGQNTRFILNVQSKPTAEVKWYHN-GVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRA 81 (103)
T ss_dssp TTCEEEEEEECCCC-EEEETTCCEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CCCCCCEEEeCCcc-eEEeCCCeEEEEEEEEecCCCEEEEEEC-CEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEE
Confidence 34678999999988 9999999999999999999999999999 7777666666542 347999998 69999999
Q ss_pred EEEecCcceEEEEEEEEE
Q psy8771 174 IAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 174 ~a~n~~g~~~~~~~l~v~ 191 (904)
.|.|..|..+..+.|.|.
T Consensus 82 ~a~N~~G~~~~~~~l~V~ 99 (103)
T 3qp3_A 82 VCTNYKGEASDYATLDVT 99 (103)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEeCCCcEEEEEEEEEE
Confidence 999999999999999987
No 199
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.36 E-value=3.2e-12 Score=109.69 Aligned_cols=95 Identities=23% Similarity=0.439 Sum_probs=80.1
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCceeec---ce--EEEEeee--cCCeEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPVG---RN--VLTLDRV--TESENYTC 173 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~~---~~--~l~i~~l--~d~g~Y~c 173 (904)
..+|.|...+.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+.. ..++.+. ++ .|.|.++ +|+|.|+|
T Consensus 6 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~k~-g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 83 (110)
T 2dm2_A 6 SGAPFFEMKLKH-YKIFEGMPVTFTCRVAGNPKPKIYWFKD-GKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTI 83 (110)
T ss_dssp SCCCCBSSCCCC-EEEETTCCEEEEEEBCCSSCCEEEEECS-SCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEE
T ss_pred CCCCEEEecCcC-eEEeCCCeEEEEEEEEecCCCEEEEEEC-CEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEE
Confidence 568889988888 9999999999999999999999999999 666654 4555442 23 7999998 69999999
Q ss_pred EEEecCcceEEEEEEEEEeecCCCCCCCCCCc
Q psy8771 174 IAASVLGVIETSTIVKVQCKYAPLLTLPVAPL 205 (904)
Q Consensus 174 ~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~ 205 (904)
.|.|..|..+..+.|.|. ..|.+|.
T Consensus 84 ~a~N~~g~~~~~~~l~V~-------~~~~~P~ 108 (110)
T 2dm2_A 84 MAANPQGRISCTGRLMVQ-------AVNSGPS 108 (110)
T ss_dssp EEECTTCCEEECCCEEEE-------CCSCCSS
T ss_pred EEEECCCeEEEEEEEEEE-------CCCCCCC
Confidence 999999999999999998 6666664
No 200
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=99.36 E-value=7.6e-12 Score=109.09 Aligned_cols=104 Identities=25% Similarity=0.318 Sum_probs=79.2
Q ss_pred ecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCcc-EEEEEEEEEEccCCCCccEEEEec---CcceEEecCCCCCc
Q psy8771 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGH-IVYYKLQFVETGRSDSEASIVTLK---NQTSFVLDELKKWT 786 (904)
Q Consensus 711 t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~-~~~Y~v~~~~~~~~~~~~~~~~~~---~~~~~~i~~L~p~t 786 (904)
+.+++|.. |.++.+...+.+ +.|+|++| ...+|. +.+|.|+|+..+...+......+. ..+.++|.+|++++
T Consensus 3 s~~~~P~~-P~~~~~~~~~~t-v~l~W~~P--~~~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t 78 (122)
T 2e3v_A 3 SGSSGPSS-PSIDQVEPYSST-AQVQFDEP--EATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPET 78 (122)
T ss_dssp ---CCCCC-CEEEEEEECSSC-EEEEEECC--CCC--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTC
T ss_pred CCCcCCcC-CCccEEEecCCc-EEEEECCC--CcCCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCC
Confidence 45567775 899999888877 99999999 456777 999999999887554422222222 67899999999999
Q ss_pred eEEEEEEEeeCCCCCCCCCcEEeecCCC-CCCC
Q psy8771 787 EYRIWVLAGTSIGDGPSSYPITIRTHED-DPSE 818 (904)
Q Consensus 787 ~Y~~~V~a~~~~g~g~~s~~~~~~t~~~-~P~~ 818 (904)
.|.|+|+|.|..|.|++|..+.++|.+. +|++
T Consensus 79 ~Y~~rV~A~n~~G~g~~S~~~~~~t~~~~~P~~ 111 (122)
T 2e3v_A 79 TYAVRLAALNGKGLGEISAASEFKTQPVREPSA 111 (122)
T ss_dssp EEEEEEEEEETTEECCCCCCEEEECCCCCCCC-
T ss_pred EEEEEEEEEeCCccCCCcccccccccCCCCCCC
Confidence 9999999999999999999999866543 4443
No 201
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.36 E-value=2.7e-12 Score=122.98 Aligned_cols=167 Identities=19% Similarity=0.246 Sum_probs=105.4
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC--CCCceee-cceEEEEeee--cCCeEEEEEEEec
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT--PDDKLPV-GRNVLTLDRV--TESENYTCIAASV 178 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~--~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~ 178 (904)
+|.|...|.+ ..+.+|+++.|.|.+.|.|.+.+.|+++ +..+. ...++.. .+++|.|.++ +|+|.|+|.+.|.
T Consensus 2 ~~~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 79 (189)
T 2v5t_A 2 MLTFREVVSP-QEFKQGEDAEVVCRVSSSPAPAVSWLYH-NEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVE 79 (189)
T ss_dssp CCEEEECCSS-EEEETTSCEEECCEEECSSCCEEEEEC------CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEET
T ss_pred CceeeccCCC-EEEeCCCcEEEEEEEcCCCCCEEEEEEC-CccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEc
Confidence 6788888888 9999999999999999999999999999 55443 3445543 5778999999 6999999999998
Q ss_pred CcceE--EEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEeeccee
Q psy8771 179 LGVIE--TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEISGIIT 252 (904)
Q Consensus 179 ~g~~~--~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~~~~~ 252 (904)
.+... ....+.+. ..+....+..+... .......+.|.+...+.+... +.|...+. ..... . ....
T Consensus 80 ~~~~~~~~~~~l~v~--~~p~~~~~~~~~~~--~~~~g~~v~l~C~~~g~p~~~--v~W~~~g~~~~~~~~~~-~-~~~~ 151 (189)
T 2v5t_A 80 ARGEIDFRDIIVIVN--VPPAISMPQKSFNA--TAERGEEMTFSCRASGSPEPA--ISWFRNGKLIEENEKYI-L-KGSN 151 (189)
T ss_dssp TTTEEEEEEEEEEEE--EEEEEECSCCEEEE--ETTSCCCEEEECEEEEESCCE--EEEEETTEECCCSSSEE-E-ETTT
T ss_pred CCCceEEEEEEEEec--CCCCcccccccccc--cccCCCcEEEEEEEccCCCCe--EEEEECCEECcCCCcEE-E-ecCC
Confidence 86544 33444444 22211111111111 112234455555443222222 33333221 11111 1 1223
Q ss_pred ceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 253 TYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
..+.|.++...+.+.|+|.|.|..|...
T Consensus 152 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~ 179 (189)
T 2v5t_A 152 TELTVRNIINSDGGPYVCRATNKAGEDE 179 (189)
T ss_dssp TEEEECSCCGGGCEEEEEEEEETTEEEE
T ss_pred CEEEEcCCChhhCeeEEEEEEeCCCcee
Confidence 6799999999999999999999988643
No 202
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.36 E-value=1.2e-11 Score=108.09 Aligned_cols=98 Identities=19% Similarity=0.302 Sum_probs=79.1
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe---ecCceEEEEcCCCCCCeEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV---VDNNQLTTISDLTPHTIYTIRV 556 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~L~p~t~Y~~~V 556 (904)
.+|.+|.++.+...+.+++.|+|.++.+.++.+.+|.|+|+.... ...|.... ....+.+.+.+|.|++.|.|+|
T Consensus 16 ~~P~~P~~~~~~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~--~~~w~~~~~~~~~~~~~~~v~~L~p~t~Y~frV 93 (121)
T 1x4z_A 16 SPPEAPDRPTISTASETSVYVTWIPRGNGGFPIQSFRVEYKKLKK--VGDWILATSAIPPSRLSVEITGLEKGISYKFRV 93 (121)
T ss_dssp CCCCCCCCCEEEECCSSEEEEECCCCCCTTSCCCEEEEEEEESSS--CCCCEEEEEEECTTCCEEEEESCCTTCEEEEEE
T ss_pred CCCccCCCCEEEEccCCEEEEEEECCCCCCCcceEEEEEEEECCC--CCceEEeecccCCCcCEEEECCCCCCCEEEEEE
Confidence 456899999999999999999999877666789999999998752 14455443 2467889999999999999999
Q ss_pred EEEeCCCCCCCCCcEE-EecCCCC
Q psy8771 557 QAFTSVGPGPLSAPVL-VKTQQGV 579 (904)
Q Consensus 557 ~a~~~~g~~~~S~~~~-~~t~~~~ 579 (904)
+|+|..|.|.+|.... +++....
T Consensus 94 ~A~n~~G~s~~S~~~~~v~~~~~~ 117 (121)
T 1x4z_A 94 RALNMLGESEPSAPSRPYVVSGSG 117 (121)
T ss_dssp EEEETTEECCCCCCCCCEECCSSC
T ss_pred EEEcCCCcCCCcCCCCCEEcCCCC
Confidence 9999999998888764 5554433
No 203
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.35 E-value=8.6e-13 Score=110.34 Aligned_cols=92 Identities=16% Similarity=0.204 Sum_probs=76.6
Q ss_pred CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT 796 (904)
Q Consensus 718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~ 796 (904)
.+|.+|.+.. ..+++.|+|++|. ..+++|++|.|+|+.. ...|......+. ..+.+++.+|.+++.|.|||.|.|
T Consensus 9 ~pP~~l~v~~-~~~sv~L~W~pP~--~~~~~I~gY~vey~~~-~~~W~~~~~~~~~~~t~~~v~~L~pg~~Y~FRV~A~n 84 (108)
T 1v5j_A 9 SPPRGLVAVR-TPRGVLLHWDPPE--LVPKRLDGYVLEGRQG-SQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFA 84 (108)
T ss_dssp CCCEEEEEEE-CSSSEEEEEECCS--CCSSCCCBEEEEEEET-TCCCEEEEEEECSSCCEEECCCCCTTSCEECCBEEEE
T ss_pred CCCcceEEEE-eCCEEEEEECCCC--CCCCCCcEEEEEEEeC-CCCcEEeeeecCCCcCEEEeCCCCCCCEEEEEEEEEc
Confidence 5789999976 5678999999995 5788999999999983 333433223344 889999999999999999999999
Q ss_pred CCCCCCCCCcEEeecCC
Q psy8771 797 SIGDGPSSYPITIRTHE 813 (904)
Q Consensus 797 ~~g~g~~s~~~~~~t~~ 813 (904)
..|.|.+|+.+.++|..
T Consensus 85 ~~G~s~pS~~~~v~T~~ 101 (108)
T 1v5j_A 85 GSFVSDPSNTANVSTSG 101 (108)
T ss_dssp TTEEEEECSCCCCCCSS
T ss_pred CCCCcCCCCCEEEEeCC
Confidence 99999999999988864
No 204
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.35 E-value=3.3e-12 Score=111.98 Aligned_cols=110 Identities=16% Similarity=0.160 Sum_probs=84.3
Q ss_pred CCcEEEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCC
Q psy8771 568 SAPVLVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHS 647 (904)
Q Consensus 568 S~~~~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~ 647 (904)
+..+...+....|.+|.++.+..++.+++.|+|.++.+ +
T Consensus 6 s~~~~~~~~~~~P~~P~~l~~~~~~~~sv~l~W~p~~~-----------------------------------------~ 44 (124)
T 1wis_A 6 SGTISSGVPPELPGPPTNLGISNIGPRSVTLQFRPGYD-----------------------------------------G 44 (124)
T ss_dssp SCCCCSCCCCCCCCCCEEEEEESCCSSCEEEEEECCCC-----------------------------------------C
T ss_pred cccccccCCCCCCccCCCCEEEEecCCEEEEEEECCCC-----------------------------------------C
Confidence 44444555667888899999988889999999987764 5
Q ss_pred CCceeeEEEEEEeC---CccccceEE----ecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCC-eeEEecCCCCCC
Q psy8771 648 GENIISYELYWNDT---YAKAKHHRR----IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPP-IPVRTKQYVPGA 718 (904)
Q Consensus 648 ~~~~~~y~v~~~~~---~~~~~~~~~----~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~-~~~~t~~~~p~~ 718 (904)
++.+.+|.|+|+.. ....+.... ......++|.+|.|++.|.|+|+|+|..|.|.+|.. ..++|.+.+|..
T Consensus 45 ~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G~s~~S~~~~~~~T~~~~P~~ 123 (124)
T 1wis_A 45 KTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNIVGTSPPSQPSRKIQTLQSGPSS 123 (124)
T ss_dssp SSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEECCCCEEECSSCBCCCCCCCCCEECCCSSCCC
T ss_pred CCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCCCCCCCEEEEEEEEEECCccCCCcCCccceEcCCCCCCC
Confidence 66788888888873 333343322 245679999999999999999999999999999876 468888776653
No 205
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.35 E-value=1.2e-11 Score=119.18 Aligned_cols=162 Identities=16% Similarity=0.148 Sum_probs=109.9
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCC--Cceee---c--------ceEEEEeee--c
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPD--DKLPV---G--------RNVLTLDRV--T 166 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~--~~~~~---~--------~~~l~i~~l--~ 166 (904)
.+|.|...|.+ +.+.+|+++.|.|.+. |.|.+.|.|+|+ +..+... .++.+ . .+.|.|.++ +
T Consensus 1 e~~~~~~~p~~-~~v~~G~~v~l~C~~~~~~p~~~v~W~~~-g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 78 (195)
T 2c5d_C 1 EESPFVGNPGN-ITGARGLTGTLRCQLQVQGEPPEVHWLRD-GQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLS 78 (195)
T ss_dssp -CCSEEECCCC-EEECTTCCEEEEEEEEEESSCCCCEEEET-TEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCST
T ss_pred CCCeeccChhh-eEEecCCcEEEecccccCCCCcEEEEEEC-CEEcccCCCCceEEEEccccccceeeccEEEEEecccc
Confidence 36889999998 9999999999999999 999999999999 7666654 23332 1 468999999 6
Q ss_pred CCeEEEEEEEecCcceEE-EEEEEEEeecCCCCCCC---CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCC
Q psy8771 167 ESENYTCIAASVLGVIET-STIVKVQCKYAPLLTLP---VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANT 242 (904)
Q Consensus 167 d~g~Y~c~a~n~~g~~~~-~~~l~v~~~~~~~~~~P---~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~ 242 (904)
|+|.|+|.|.|..|.... .+.|.|. ..| ..|.+..+.. ...+.|.+...+.+.. ..+.|...+...
T Consensus 79 d~G~Y~C~~~~~~~~~~~~~~~l~V~-------~~p~~~~~~~~~~~~~--g~~~~l~C~~~g~p~p-~~v~W~~~~~~~ 148 (195)
T 2c5d_C 79 DTGQYQCLVFLGHQTFVSQPGYVGLE-------GLPYFLEEPEDRTVAA--NTPFNLSCQAQGPPEP-VDLLWLQDAVPL 148 (195)
T ss_dssp TCEEEEEEEEETTEEEECCCEEEEEC-------CSCEEEECCCCEEECT--TCCEEEEEEEECSSCC-CEEEEEESSCBS
T ss_pred CCcEEEEEEEeCCCceecccEEEEEe-------cCCeEEcCCCcEEEcC--CCEEEEEeECCCCCCC-CEEEEEECCEec
Confidence 999999999998877544 3777776 222 1333443333 3456666655433222 124444432211
Q ss_pred CeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 243 PYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 243 ~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
... ........+.|.++. +.+.|+|.|.|..|..
T Consensus 149 ~~~-~~~~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~ 182 (195)
T 2c5d_C 149 ATA-PGHGPQRSLHVPGLN--KTSSFSCEAHNAKGVT 182 (195)
T ss_dssp SSS-TTSSCCEEEEECCCS--SCEEEEEEEEETTEEE
T ss_pred cCC-CCcCCCCeEEEcccc--cCceEEEEEEcCCCce
Confidence 100 000244679999988 5799999999998865
No 206
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.35 E-value=3.7e-12 Score=105.68 Aligned_cols=86 Identities=19% Similarity=0.290 Sum_probs=77.0
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecC
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVL 179 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~ 179 (904)
..||.|...|.. +.+.+|+.+.|.|.+.|.| |.|.|+|+ +..+..+.++.+.++.|.|.++ +|+|.|+|.|.|..
T Consensus 7 ~~pp~~~~~~~~-~~v~~G~~v~l~C~~~g~p-p~i~W~k~-g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 83 (95)
T 2ckn_A 7 AQPWGVPVEVES-LLVHPGDLLQLRCRLRDDV-QSINWLRD-GVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPS 83 (95)
T ss_dssp SCSCCBTTBBCC-EEECTTSCEEEECCEESSC-CEEEEEBT-TBCCCCCSSEEECSSEEEESSCCGGGSEEEEEEEEETT
T ss_pred CCCCEEEcCcce-EEEcCCCeEEEEEECCCCC-CceEEEEC-CEecCCCCCEEEeCCEEEECCCChHHCEEEEEEeccCC
Confidence 567888888888 9999999999999999998 89999998 7778777788888899999999 69999999999999
Q ss_pred cceEEEEEEEE
Q psy8771 180 GVIETSTIVKV 190 (904)
Q Consensus 180 g~~~~~~~l~v 190 (904)
|..+..+.|.|
T Consensus 84 g~~~~~~~l~V 94 (95)
T 2ckn_A 84 GSDTTYFSVNV 94 (95)
T ss_dssp EEEEEEEEEEE
T ss_pred CcEEEEEEEEE
Confidence 99888877766
No 207
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.35 E-value=4.4e-12 Score=106.42 Aligned_cols=88 Identities=19% Similarity=0.259 Sum_probs=76.3
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-----cceEEEEeee--cCCeEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----GRNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~ 174 (904)
..||.|...+.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.. +...|.|.++ +|+|.|+|.
T Consensus 3 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~k~-g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 80 (99)
T 1g1c_A 3 MEAPKIFERIQS-QTVGQGSDAHFRVRVVGKPDPECEWYKN-GVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVK 80 (99)
T ss_dssp CEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCCceEecCcc-eEEcCCCcEEEEEEEEEeCCCEEEEEEC-CEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEE
Confidence 457889888888 9999999999999999999999999999 777766555442 3347999999 699999999
Q ss_pred EEecCcceEEEEEEEEE
Q psy8771 175 AASVLGVIETSTIVKVQ 191 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~ 191 (904)
|.|..|.....+.|.|.
T Consensus 81 a~N~~g~~~~~~~l~V~ 97 (99)
T 1g1c_A 81 AINIAGETSSHAFLLVQ 97 (99)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEECCCcEEEEEEEEEe
Confidence 99999999999999887
No 208
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.35 E-value=3.6e-12 Score=133.74 Aligned_cols=240 Identities=11% Similarity=0.059 Sum_probs=139.2
Q ss_pred eeCCCCCCCCcEEEeccC-CceEEEEeCCCCC----------C--CceecccccccccceEEEEeeeccCCeeeeeeeec
Q psy8771 30 VTEPGTAPRDVQVRPLSS-STMVIQWDEPETP----------N--GQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQV 96 (904)
Q Consensus 30 ~~~p~~~p~~l~~~~~~~-~s~~v~W~~~~~~----------~--g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v 96 (904)
.....+....|.|...+. +.+.|.|.+.... + +.+........+.....|...+..........+.+
T Consensus 16 ~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v 95 (317)
T 2y25_A 16 WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 95 (317)
T ss_dssp EEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCST
T ss_pred EEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEE
Confidence 333344666777775555 6789999765211 1 12333334444555555555443333333333332
Q ss_pred cCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEcc----------CCCCeEEEeeCCccccCCCCceeec----ceEEEE
Q psy8771 97 ADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG----------SPMPFVKWRKGQNIELTPDDKLPVG----RNVLTL 162 (904)
Q Consensus 97 ~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g----------~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i 162 (904)
..+|.+...+.+ ..+..|+.+.|.|.+.| .|.+.|.|+++ +..+....++... ...|.|
T Consensus 96 -----~~~~~~~~~~~~-~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~-~~~~~~~~~~~~~~~~~~~~L~i 168 (317)
T 2y25_A 96 -----EAFKELMMEVCK-KIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHN-GSAIRYSDRVKTGVTGEQIWLQI 168 (317)
T ss_dssp -----HHHHHHHHHHHH-HHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEES-SSBCCCCSSEEEEECSSEEEEEE
T ss_pred -----ecCccccccCCc-eecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEEC-CEECCCCCCeEEeccCCEEEEEE
Confidence 223333333334 56678888888888888 79999999999 7777766666542 245999
Q ss_pred eee--cCCeEEEEEEEecCcceEEEEEEEEEee-----------cCCCCCC--C----CCCcceEEEeecCCeEEEEEeC
Q psy8771 163 DRV--TESENYTCIAASVLGVIETSTIVKVQCK-----------YAPLLTL--P----VAPLDVKISEVTATSVRLDWTY 223 (904)
Q Consensus 163 ~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~-----------~~~~~~~--P----~~p~~l~~~~~~~~sv~l~W~~ 223 (904)
.++ +|+|.|+|.|.|..|.......|.+... ....... | ..|..+.+.... .+.|.+..
T Consensus 169 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~--~~~l~C~~ 246 (317)
T 2y25_A 169 NEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGK--ALNLTCNV 246 (317)
T ss_dssp ESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTS--BBCEEEEE
T ss_pred CcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCC--EEEEEEEE
Confidence 999 6999999999999998887777765310 0000000 0 123333343333 33343333
Q ss_pred CCccceEEEEEEEeCCC----CCCeEEeec-ceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 224 PSETLLYYVIQYKPKAA----NTPYSEISG-IITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 224 ~~~~~~~y~v~~~~~~~----~~~~~~~~~-~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
.+.+... +.|...+. ...+..... .....+.|.++...+.+.|+|.|.|..|...
T Consensus 247 ~g~p~p~--i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~ 306 (317)
T 2y25_A 247 WGDPPPE--VSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSET 306 (317)
T ss_dssp ECSSCCE--EEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEE
T ss_pred ecCCCCE--EEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEE
Confidence 2222222 44443321 122222221 3335899999999999999999999988653
No 209
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.35 E-value=1.1e-12 Score=111.17 Aligned_cols=99 Identities=32% Similarity=0.476 Sum_probs=83.7
Q ss_pred ecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEE
Q psy8771 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYR 789 (904)
Q Consensus 711 t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~ 789 (904)
|.+..|+.+|.++.+...+.+++.|+|++|.....+|.+.+|.|+|+..+... ...+. ..+.+.|.+|+|++.|.
T Consensus 3 t~e~~pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~~----~~~~~~~~~~~~i~~L~p~t~Y~ 78 (103)
T 2edy_A 3 SGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQQ----ELQNITTDTRFTLTGLKPDTTYD 78 (103)
T ss_dssp TTCCCCSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSCC----EEEEEESSSCCEECSCCTTCCEE
T ss_pred CCCCCCCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCCc----cEEEcCCcceEEEcCCCCCCEEE
Confidence 45666777899999999999999999999964467889999999999876532 23333 78899999999999999
Q ss_pred EEEEEeeCCCCCCCCCcEEeecCC
Q psy8771 790 IWVLAGTSIGDGPSSYPITIRTHE 813 (904)
Q Consensus 790 ~~V~a~~~~g~g~~s~~~~~~t~~ 813 (904)
|+|+|.|..|.|++|..+.++|.+
T Consensus 79 ~~V~A~n~~G~g~~S~~~~~~T~p 102 (103)
T 2edy_A 79 IKVRAWTSKGSGPLSPSIQSRTMP 102 (103)
T ss_dssp EECCEECSSCBCCCCCCCCCCCCC
T ss_pred EEEEEECCCCCCCCCCCEEEEecc
Confidence 999999999999999999988854
No 210
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.35 E-value=3.8e-12 Score=108.50 Aligned_cols=102 Identities=23% Similarity=0.387 Sum_probs=83.4
Q ss_pred ecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEE
Q psy8771 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYR 789 (904)
Q Consensus 711 t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~ 789 (904)
|.+.+|..| . +.+...+.+++.|+|++|. ..+|.+.+|.|+|+..+...+ ....+. ..+.++|.+|.|++.|.
T Consensus 3 T~~~~P~~p-~-~~v~~~~~~sv~l~W~~p~--~~~g~i~~Y~v~~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~ 76 (107)
T 2dn7_A 3 SGSSGPGRP-T-MMISTTAMNTALLQWHPPK--ELPGELLGYRLQYCRADEARP--NTIDFGKDDQHFTVTGLHKGTTYI 76 (107)
T ss_dssp TCCCCCCCC-E-EEEEECSTTEEEEEEECCS--SCSSCCCEEEEEEEETTCSSC--EEEEEETTCCEEEEECCCTTCEEE
T ss_pred CCCCCCCCC-c-EeEEecCCCEEEEEECCCC--CCCCceeEEEEEEEECCCCCC--EEEEeCCCccEEEeCCCCCCCEEE
Confidence 566677754 4 6777779999999999984 678899999999998765433 333444 78899999999999999
Q ss_pred EEEEEeeCCCCCCCCCcEEeecCCCCCCCC
Q psy8771 790 IWVLAGTSIGDGPSSYPITIRTHEDDPSEV 819 (904)
Q Consensus 790 ~~V~a~~~~g~g~~s~~~~~~t~~~~P~~v 819 (904)
|+|+|.|..|.|.+|. ..+.|..+.|+++
T Consensus 77 ~~V~A~n~~G~g~~s~-~~~~T~~~~P~~p 105 (107)
T 2dn7_A 77 FRLAAKNRAGLGEEFE-KEIRTPEDLSGPS 105 (107)
T ss_dssp EEEEEEETTEEEEEEE-EEEECCCCCCCCC
T ss_pred EEEEEEcCCcccCCee-eEEeCCCCCCCCC
Confidence 9999999999999988 6788888888654
No 211
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.34 E-value=5.3e-12 Score=108.49 Aligned_cols=103 Identities=22% Similarity=0.341 Sum_probs=83.2
Q ss_pred EEecCCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCce
Q psy8771 572 LVKTQQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENI 651 (904)
Q Consensus 572 ~~~t~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~ 651 (904)
.++|....|.+|.++.+...+.+++.|+|.++.. .++.+
T Consensus 3 ~~~T~~~~P~~P~~l~~~~~~~~sv~l~W~~p~~-----------------------------------------~~g~i 41 (111)
T 1x5l_A 3 SGSSGQAAPSQVVVIRQERAGQTSVSLLWQEPEQ-----------------------------------------PNGII 41 (111)
T ss_dssp CCCCSCCCCCCCCCEECSCBCSSCEEEEECCCSC-----------------------------------------CCSCC
T ss_pred eEEcCCCCCCCCceEEEEEcCCCEEEEEECCCCC-----------------------------------------CCCEE
Confidence 3566777888888888888888889999988865 56678
Q ss_pred eeEEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCC
Q psy8771 652 ISYELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYV 715 (904)
Q Consensus 652 ~~y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~ 715 (904)
.+|.|+|+..+.... ..........+.|.+|.|++.|.|+|+|+|..|.|.+|..+.++|....
T Consensus 42 ~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~T~~~~ 106 (111)
T 1x5l_A 42 LEYEIKYYEKDKEMQSYSTLKAVTTRATVSGLKPGTRYVFQVRARTSAGCGRFSQAMEVETGKPS 106 (111)
T ss_dssp CEEEEEEEESSSCCSSCEEEEESSSEEEECSCCTTCEEEECEEEEETTEECCCCCCEEEECCCTT
T ss_pred EEEEEEEEECCCCceeEEEecCCCCEEEEcCCCCCCEEEEEEEEEeCCcCCCCcccEEEEcCCCC
Confidence 889998887764333 3344556789999999999999999999999999999999999987653
No 212
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.34 E-value=3.9e-12 Score=133.52 Aligned_cols=165 Identities=12% Similarity=0.167 Sum_probs=105.9
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccC-CCCeEEEeeCCccccCCCCceee--cceEEEEeee--cCCeEEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIELTPDDKLPV--GRNVLTLDRV--TESENYTCIAA 176 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~ 176 (904)
..+|.|..++ + +.+.+|+.+.|.|.+.|. |.+.|.|+|+ +..+....++.. +...|.|.++ +|+|.|+|.|.
T Consensus 5 ~~~P~~~~~~-~-~~v~~G~~v~l~C~~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 81 (317)
T 2y25_A 5 FTGPHFVEYL-S-WEVTGECNVLLKCKVANIKKETHIVWYKD-EREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILK 81 (317)
T ss_dssp SSCCEEEEEE-E-EEEETTTEEEEEEEEESCCTTCEEEEEET-TEEECCSCC-----CCEEEEETTCCSTTCSCEEEEEE
T ss_pred cCCCcEeeee-e-EEECCCCeEEEEEEEcCCCCCCEEEEEEC-CeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEEE
Confidence 4688888554 5 999999999999999998 8899999999 777766555543 4569999998 69999999999
Q ss_pred ecCcceEEEEEEEEEeecC------CCCCCCCCCcceEEEeec----------CCeEEEEEeCCCccceEEEEEEEeCCC
Q psy8771 177 SVLGVIETSTIVKVQCKYA------PLLTLPVAPLDVKISEVT----------ATSVRLDWTYPSETLLYYVIQYKPKAA 240 (904)
Q Consensus 177 n~~g~~~~~~~l~v~~~~~------~~~~~P~~p~~l~~~~~~----------~~sv~l~W~~~~~~~~~y~v~~~~~~~ 240 (904)
|..|.......|.|..... ......+.+..+.+...+ .....+.|...+..+. .
T Consensus 82 n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~----------~ 151 (317)
T 2y25_A 82 DDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIR----------Y 151 (317)
T ss_dssp SSSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCC----------C
T ss_pred CCCCcEEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECC----------C
Confidence 9999876665555441000 000011223333332221 1223334433221111 1
Q ss_pred CCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 241 NTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 241 ~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
...+..........+.|.++...+.+.|+|.|.|..|..
T Consensus 152 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 190 (317)
T 2y25_A 152 SDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGH 190 (317)
T ss_dssp CSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEE
T ss_pred CCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceE
Confidence 122222233334669999999999999999999987753
No 213
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.34 E-value=7.8e-12 Score=108.76 Aligned_cols=108 Identities=19% Similarity=0.351 Sum_probs=84.6
Q ss_pred CCCCCCCceeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee--cCceEEE
Q psy8771 465 EGATTPPIPVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV--DNNQLTT 542 (904)
Q Consensus 465 ~~~~s~~~~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~ 542 (904)
.+..+....+.|....| .+|.++.+...+.+++.|+|++|... |.+.+|.|+|+.... ..|..... ...+.+.
T Consensus 2 ss~~~~~~~~~t~~~~P-~~P~~l~~~~~~~~sv~l~W~~p~~~-g~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~~~ 76 (118)
T 2yrz_A 2 SSGSSGSHDSRLTAGVP-DTPTRLVFSALGPTSLRVSWQEPRCE-RPLQGYSVEYQLLNG---GELHRLNIPNPAQTSVV 76 (118)
T ss_dssp CCCCCSCCTTSSSCSCC-CCCCCCEECCCBTTEEEEECCCCCCS-SCEEEEEEEEEBSSS---CCEEEEEESCTTCCEEE
T ss_pred CCCCCCcceeecCCCCC-CCCCceEEEeCCCCEEEEEeCCCCCC-CCccEEEEEEEECCC---CceEEEEcCCCCcCEEE
Confidence 34445556677777666 78899999999999999999998765 689999999998754 33444433 4578899
Q ss_pred EcCCCCCCeEEEEEEEEeCCCCCCCCC-cEEEecCC
Q psy8771 543 ISDLTPHTIYTIRVQAFTSVGPGPLSA-PVLVKTQQ 577 (904)
Q Consensus 543 ~~~L~p~t~Y~~~V~a~~~~g~~~~S~-~~~~~t~~ 577 (904)
|.+|.|++.|.|+|+|.|..|.|.+|. .+.+.+..
T Consensus 77 i~~L~p~t~Y~~~V~A~n~~G~g~~S~~~~~~~t~~ 112 (118)
T 2yrz_A 77 VEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQV 112 (118)
T ss_dssp EESCCTTCEEEEEEEEEESSCEEEEEEEEEECCCSC
T ss_pred eCCCCCCCEEEEEEEEEcCCcCCCCcCCceEeCCCC
Confidence 999999999999999999999998887 34444433
No 214
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=6.5e-12 Score=108.33 Aligned_cols=105 Identities=21% Similarity=0.314 Sum_probs=83.7
Q ss_pred CeeEEecC-CCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCC
Q psy8771 706 PIPVRTKQ-YVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELK 783 (904)
Q Consensus 706 ~~~~~t~~-~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~ 783 (904)
.+...|.+ .+|. +|.+|++...+ +++.|+|++|. ..||.+.+|.|+|+.... + .....+. ..+.++|.+|+
T Consensus 7 t~~~~t~e~~~P~-~P~~l~~~~~~-~sv~l~W~~P~--~~ng~i~gY~i~y~~~~~--~-~~~~~~~~~~~~~~l~~L~ 79 (116)
T 2edb_A 7 GPENDLDESQVPD-QPSSLHVRPQT-NCIIMSWTPPL--NPNIVVRGYIIGYGVGSP--Y-AETVRVDSKQRYYSIERLE 79 (116)
T ss_dssp SSSSSCBCSSCCC-CCSCEEEEECS-SCEEEEECCCS--CTTBCCCEEEEEEEESST--T-SEEEEEETTCCEEEECSCC
T ss_pred cccccCCCCCCCC-CCCCeEEEECC-CEEEEEEcCCC--CCCCceeEEEEEEEeCCC--C-eEEEEeCCCeeEEEeCCCC
Confidence 34555666 6676 78999999988 99999999994 568999999999986332 2 2233444 88999999999
Q ss_pred CCceEEEEEEEeeCCCCCCCCCcEEeecCCCCCCC
Q psy8771 784 KWTEYRIWVLAGTSIGDGPSSYPITIRTHEDDPSE 818 (904)
Q Consensus 784 p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~~ 818 (904)
+++.|.|+|+|.|..|.|+.+. ..++|..++|.+
T Consensus 80 p~t~Y~~~V~A~n~~G~g~~~~-~~~~T~~~~P~p 113 (116)
T 2edb_A 80 SSSHYVISLKAFNNAGEGVPLY-ESATTRSITSGP 113 (116)
T ss_dssp SSSBEEEEEEEEETTEECSCEE-ECCBCCCSSSCS
T ss_pred CCCEEEEEEEEEeCCccCCCCc-ceeecccCCCCC
Confidence 9999999999999999998654 568888877754
No 215
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.34 E-value=6.3e-12 Score=133.88 Aligned_cols=233 Identities=10% Similarity=0.072 Sum_probs=113.8
Q ss_pred CceEEEEeCCCCC-------------------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEE
Q psy8771 48 STMVIQWDEPETP-------------------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFS 108 (904)
Q Consensus 48 ~s~~v~W~~~~~~-------------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~ 108 (904)
+.+.|.|.+.... ++.+........|.....|...+........+.+.|.......++.+
T Consensus 46 ~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~- 124 (349)
T 4dep_C 46 AGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPM- 124 (349)
T ss_dssp TTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSC-
T ss_pred CCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCccc-
Confidence 3488999765421 22333333444455555555554433333444555543222222211
Q ss_pred cCCCCceEEecCCCeEEEEEE-----ccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecC-c
Q psy8771 109 IPPPALLEVMLDSPLNLSCVA-----VGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVL-G 180 (904)
Q Consensus 109 ~~~~~~~~~~~g~~~~l~C~~-----~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~-g 180 (904)
..+.. ..+.+|+.+.|.|.+ .|.|.+.|+|+|+ +..+....++...+..|.|.++ +|+|.|+|.|.|.. |
T Consensus 125 ~~~~~-~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~-~~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g 202 (349)
T 4dep_C 125 KLPVH-KLYIEYGIQRITCPNVDGYFPSSVKPTITWYMG-CYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENG 202 (349)
T ss_dssp CCCEE-EEETTCSEEEEECCSCTTSSCTTSCCEEEEEET-TEECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETT
T ss_pred ccCcc-eeeecCccEEEEcCCCcccccCCCCceEEEeeC-CEECCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCC
Confidence 22334 688899999999986 8899999999999 7777666666667778999999 69999999999987 4
Q ss_pred ce---EEEEEEEEEeec----CCCCCCCCCCcceEEEeecCCeEEEEEeCC--CccceEEEEEEEeCCCCCCe-----E-
Q psy8771 181 VI---ETSTIVKVQCKY----APLLTLPVAPLDVKISEVTATSVRLDWTYP--SETLLYYVIQYKPKAANTPY-----S- 245 (904)
Q Consensus 181 ~~---~~~~~l~v~~~~----~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~--~~~~~~y~v~~~~~~~~~~~-----~- 245 (904)
.. +....|.|.... .|.+..|.....+.+.....-.+.|.-... +.+.. .+.|...+..... .
T Consensus 203 ~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p--~v~W~~~g~~l~~~~~~~~~ 280 (349)
T 4dep_C 203 RTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRN--EVWWTIDGKKPDDITIDVTI 280 (349)
T ss_dssp EEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEEEEECCCTTCCC--EEEEESSCC--------CCC
T ss_pred EEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEEEEEccCCCCCC--EEEEEECCEEccccCCcccc
Confidence 43 455555555211 111111111110122222222222322211 11111 2233222111000 0
Q ss_pred ---Ee----e-cceeceEEEcCCCCCCe-EEEEEEEEcCCCCCCCCCCe
Q psy8771 246 ---EI----S-GIITTYYTVRNLSPYTE-YEFYIIAVNNLGRGPPSSPA 285 (904)
Q Consensus 246 ---~~----~-~~~~~~~~i~~L~p~~~-Y~~~v~a~n~~g~s~~s~~~ 285 (904)
.. . ......+.|.++...+. +.|+|.|.|..|....+..+
T Consensus 281 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l 329 (349)
T 4dep_C 281 NESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAAKV 329 (349)
T ss_dssp CEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEECC-
T ss_pred ccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEEEE
Confidence 00 0 01134589999999999 99999999999875443333
No 216
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.34 E-value=6e-12 Score=107.57 Aligned_cols=98 Identities=18% Similarity=0.292 Sum_probs=81.4
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCcee----eEEEEEEeCCccccce-EEecccceEEEeCCCCCcEEEEEEEE
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENII----SYELYWNDTYAKAKHH-RRIGLVETYSLTGLYPNTLYYIWLAA 694 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~----~y~v~~~~~~~~~~~~-~~~~~~~~~~l~~L~p~t~Y~v~V~a 694 (904)
.+.+|.+|++..++.+++.|+|.++...++.+. +|.|+|+......... ......++++|.||+|+|.|.|+|+|
T Consensus 8 pp~~P~~l~~~~~s~tsi~lsW~~p~~~~~~~~~~~~~Y~v~y~~~~~~~~~~~~~~~~~~~~~i~gL~P~T~Y~f~V~A 87 (113)
T 1x5j_A 8 PMMPPVGVQASILSHDTIRITWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKNANATTLSYLVTGLKPNTLYEFSVMV 87 (113)
T ss_dssp CCCCCEEEEEEEEETTEEEEEEECTTSCSSSCCCSSCEEEEEECBSSSSSCCCEECCBCSSEEEEESCCTTCEECCEEEE
T ss_pred CCCCCcceEEEEecCCEEEEEecCCCCccccccCcCceEEEEEEECCCCCeEEEEEecCcCEEEeCCCCCCcEEEEEEEE
Confidence 467899999999999999999999876555544 9999998743322222 22345679999999999999999999
Q ss_pred EcCCCCCCCCCCeeEEecCC-CCC
Q psy8771 695 QSPRGEGATTPPIPVRTKQY-VPG 717 (904)
Q Consensus 695 ~~~~G~~~~s~~~~~~t~~~-~p~ 717 (904)
++..|.|.+|..+.++|.+. +|.
T Consensus 88 ~~~~G~g~~S~~v~~~T~~~~~Ps 111 (113)
T 1x5j_A 88 TKGRRSSTWSMTAHGTTFELSGPS 111 (113)
T ss_dssp ECSSCBCCCCCCCCEECCCSSCCC
T ss_pred ecCCccCCCcccEEeeccCCCCCC
Confidence 99999999999999999988 776
No 217
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Probab=99.34 E-value=1.8e-12 Score=124.76 Aligned_cols=184 Identities=11% Similarity=0.068 Sum_probs=111.1
Q ss_pred CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE---EecccceEEEeC--CCCCcEEEEEEEEE
Q psy8771 621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR---RIGLVETYSLTG--LYPNTLYYIWLAAQ 695 (904)
Q Consensus 621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~---~~~~~~~~~l~~--L~p~t~Y~v~V~a~ 695 (904)
.++|++|++...+...+ |+|.++....+....|.|+|...+...|... .....+.+.|.. |.+...|.++|+|.
T Consensus 8 lp~P~nv~~~s~n~~~i-L~W~p~~~~~~~~~~Y~Vqy~~~~~~~W~~~~~C~~i~~~~Cdlt~~~~~~~~~Y~~RV~A~ 86 (211)
T 3g9v_A 8 SLKPQRVQFQSRNFHNI-LQWQPGRALTGNSSVYFVQYKIYGQRQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVRAA 86 (211)
T ss_dssp -CCCEEEEEEEETTEEE-EEEECCCC---CCCEEEEEEEETTCSSCEEEEEEEEECCSEEECTGGGCSTTSCEEEEEEEE
T ss_pred CCCCceeEEEEEcCceE-EEECCCCCCCCCCeEEEEEEEECCCCceEECccCCCCCCCEECCCCcccccCccEEEEEEEE
Confidence 46799999977777765 9999987656667889999998865555422 233446777754 57899999999999
Q ss_pred cCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCC--CCCcc--------EEEEEEEEEEccCCCCc
Q psy8771 696 SPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVE--RSNGH--------IVYYKLQFVETGRSDSE 765 (904)
Q Consensus 696 ~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~--~~~g~--------~~~Y~v~~~~~~~~~~~ 765 (904)
++.|.|.++....|.+.......||. +.+... .++|.|.|.+|... ..+|. ...|.|.|...+....
T Consensus 87 ~~~~~S~ws~~~~f~~~~~t~i~PP~-v~v~~~-~~si~V~~~~P~~~~~~~ng~~~~~~~~~~l~Y~v~y~~~~~~~~- 163 (211)
T 3g9v_A 87 SAGSYSEWSMTPRFTPWWETKIDPPV-MNITQV-NGSLLVILHAPNLPYRYQKEKNVSIEDYYELLYRVFIINNSLEKE- 163 (211)
T ss_dssp ETTEECCCEECCCBCHHHHCBCCCCE-EECC------CCCEEECCCCGGGGCSSCSSCHHHHTTCEEEEEEC------C-
T ss_pred CCCCcCCCEecCcccccccCccCCCE-EEEEEc-CCEEEEEEECCCCccccCCCceeeehhcceeEEEEEEEECCCccE-
Confidence 99888888766666654333444664 777665 45999999999531 13442 3679999987654321
Q ss_pred cEEEEec-CcceEEecCCCCCceEEEEEEEeeC--CCCCCCCCcEEee
Q psy8771 766 ASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS--IGDGPSSYPITIR 810 (904)
Q Consensus 766 ~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~--~g~g~~s~~~~~~ 810 (904)
..... ....+.|.+|+|++.|.|+|+|... ...|.+|....+.
T Consensus 164 --~~~~~~~~~~~~i~~L~p~t~Ycv~V~a~~~~~~~~s~~S~~~C~~ 209 (211)
T 3g9v_A 164 --QKVYEGAHRAVEIEALTPHSSYCVVAEIYQPMLDRRSQRSEERCVE 209 (211)
T ss_dssp --EEEEEESSCCCC----------CEEEEEEETTTTEECCCCCC----
T ss_pred --EEEEecCCcEEEEecCCCCCeEEEEEEEEeCCCCCcCCCCCCEeEC
Confidence 22223 6788999999999999999999864 2356677655543
No 218
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.33 E-value=1.9e-11 Score=104.02 Aligned_cols=100 Identities=42% Similarity=0.782 Sum_probs=85.9
Q ss_pred CCCCCCcceEEEeecCCeEEEEEeCC-CccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771 199 TLPVAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277 (904)
Q Consensus 199 ~~P~~p~~l~~~~~~~~sv~l~W~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g 277 (904)
..|.+|.++++...+.+++.|+|.++ ++.+.+|.|+|+.......+..+.......+.|.+|+|++.|.|+|+|.|..|
T Consensus 6 ~~P~~P~~~~~~~~~~~sv~l~W~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G 85 (106)
T 2dju_A 6 SGPKPPIDLVVTETTATSVTLTWDSGNSEPVTYYGIQYRAAGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNSIG 85 (106)
T ss_dssp CSCCCCEEEEEEEEETTEEEEEEECCCSSCCSEEEEEEEETTCCSCCCCBCCCCSSEEEEESCCTTCEEEEEEEEECSSC
T ss_pred cCCcCCCCcEEEeccCCEEEEEEcCCCCCCceEEEEEEEECCCCCCeEEccCCCccEEEEeCCCCCcEEEEEEEEEeCCc
Confidence 68899999999999999999999988 57899999999987655556555555668899999999999999999999999
Q ss_pred CCCCCCCeEEecCCCCCCCCC
Q psy8771 278 RGPPSSPAVITTGETEPGTAP 298 (904)
Q Consensus 278 ~s~~s~~~~~~t~~~~p~~~p 298 (904)
.+.++..+.+.+.+..|..||
T Consensus 86 ~~~~S~~~~~~T~~~~P~~Pp 106 (106)
T 2dju_A 86 RGPPSEAVRARTGEQSGPSSG 106 (106)
T ss_dssp BCCCCCCEEEECCCSSCCCCC
T ss_pred cCCCcccEEeEcCCCCCCCCC
Confidence 999999999988877665443
No 219
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.33 E-value=2.6e-11 Score=125.32 Aligned_cols=248 Identities=15% Similarity=0.145 Sum_probs=142.1
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCCccccCC-CCceee-----cceEEEEeee--cCCeEEEEE
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQNIELTP-DDKLPV-----GRNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~~~~~~~-~~~~~~-----~~~~l~i~~l--~d~g~Y~c~ 174 (904)
||.|...|.+ ..+.+|+.+.|.|.+.|.| .+.|.|+|++|..+.. ..++.+ ....|.|.++ +|+|.|+|.
T Consensus 2 ~~~v~~~p~~-~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 80 (291)
T 1qz1_A 2 VLQVDIVPSQ-GEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCV 80 (291)
T ss_dssp CCCEEEESSS-EEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CcceEecCCC-ceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEE
Confidence 5678888888 8999999999999999987 6899999932665543 344443 3568999998 699999999
Q ss_pred EEecCcc-eEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCC----eEEeec
Q psy8771 175 AASVLGV-IETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTP----YSEISG 249 (904)
Q Consensus 175 a~n~~g~-~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~----~~~~~~ 249 (904)
|.|..|. .+....|.|. ..+.. ...|....+.. ...+.|.+...+.+.. .+.|...+.... .....
T Consensus 81 ~~n~~g~~~~~~~~l~v~--~~~~~--~~~~~~~~~~~--g~~v~l~C~~~~~p~~--~v~W~~~~~~~~~~~~~~~~~- 151 (291)
T 1qz1_A 81 VTAEDGTQSEATVNVKIF--QKLMF--KNAPTPQEFKE--GEDAVIVCDVVSSLPP--TIIWKHKGRDVILKKDVRFIV- 151 (291)
T ss_dssp EECTTSCEEEEEEEEEEE--CCSEE--EECCSSEEEET--TSCEEECCEEECSSCC--EEEEEETTSCSSTTCCTTEEE-
T ss_pred EEcCCCCeeEEEEEEEee--ccccc--cCCCCcccccC--CCeEEEEEEeccCCCC--EEEEEECCEEcccCCCceEEE-
Confidence 9999864 4556666665 11111 12334444433 3345555544322222 244544332210 01111
Q ss_pred ceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeE--EecCCCCCCCCCCceEecccCCCeeEEEecCCCCCCceeeE
Q psy8771 250 IITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAV--ITTGETEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITA 327 (904)
Q Consensus 250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~--~~t~~~~p~~~p~~l~~~~~~~~~v~l~W~~p~~~~~~~~~ 327 (904)
.....+.|.++...+.+.|+|.|.|..+....+..+. +...+. ....+............+.|.+.....+...+.+
T Consensus 152 ~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~-~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W 230 (291)
T 1qz1_A 152 LSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPT-VQARQSIVNATANLGQSVTLVCDADGFPEPTMSW 230 (291)
T ss_dssp CTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEE-EEESCSEEEEETTSCCCEEEEEEEEEESCCEEEE
T ss_pred ccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCc-ccccccccccccccCceEEEEEEEEEeCCCcEEE
Confidence 1235799999999999999999998754321111111 111110 0000111111222234455555433222223333
Q ss_pred EEE--------------EeeceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771 328 KHH--------------RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE 362 (904)
Q Consensus 328 ~~~--------------~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~ 362 (904)
+.. ........+.|..+.....-.+++.|.|..|.
T Consensus 231 ~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 279 (291)
T 1qz1_A 231 TKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGE 279 (291)
T ss_dssp EETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred EECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCc
Confidence 221 01112346788888888888888899887764
No 220
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.33 E-value=5.1e-12 Score=133.67 Aligned_cols=246 Identities=18% Similarity=0.251 Sum_probs=114.9
Q ss_pred CCCCcEEEeccC-CceEEEEeCCCCC----------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCC---
Q psy8771 36 APRDVQVRPLSS-STMVIQWDEPETP----------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVR--- 101 (904)
Q Consensus 36 ~p~~l~~~~~~~-~s~~v~W~~~~~~----------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~--- 101 (904)
....|.|...+. +...|.|.+.... ++.+........|.....|...+. ......+.+.|.....
T Consensus 24 ~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~l~V~~~~~~~~ 102 (334)
T 1ry7_B 24 DAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFSVRVTDAPSSGD 102 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEeccceEEEeecccccCEEEEEEEEeC-CeEEEEEEEEEeccCcccc
Confidence 455666665554 4678999875321 222333333333444444444443 2222333444432211
Q ss_pred --------------CCCCeEEcCCC---CceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCce-----eecceE
Q psy8771 102 --------------RVPPQFSIPPP---ALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKL-----PVGRNV 159 (904)
Q Consensus 102 --------------~~~P~~~~~~~---~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~-----~~~~~~ 159 (904)
..+|.|..+.. ....+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+....++ ......
T Consensus 103 ~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~ 181 (334)
T 1ry7_B 103 DEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKN-GREFRGEHRIGGIKLRHQQWS 181 (334)
T ss_dssp ----------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBT-TBCCCTTSSTTCCCCCTTTTE
T ss_pred ccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEEC-CEECcccccccceecccceEE
Confidence 13566554321 226788999999999999999999999999 6666554332 224568
Q ss_pred EEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCC-CCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEE
Q psy8771 160 LTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAP-LLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYK 236 (904)
Q Consensus 160 l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~-~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~ 236 (904)
|.|.++ +|+|.|+|.|.|..|.....+.|.|...... .......|.+..+. ....++|.+...+.+.. .+.|.
T Consensus 182 L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~--~G~~v~l~C~~~g~p~p--~v~W~ 257 (334)
T 1ry7_B 182 LVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAV--LGSDVEFHCKVYSDAQP--HIQWL 257 (334)
T ss_dssp EEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEE--SSCCEEECCCCBCSSCE--EEEEE
T ss_pred EEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEe--CCCCEEEEEEEecCCCC--eEEEE
Confidence 999999 6999999999999999888888888732110 00001123344333 33456676665433333 34443
Q ss_pred e----CCC----CCC--eEEee-------cceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEE
Q psy8771 237 P----KAA----NTP--YSEIS-------GIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVI 287 (904)
Q Consensus 237 ~----~~~----~~~--~~~~~-------~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~ 287 (904)
. .+. ... ..... ......+.|.++...+.+.|+|.|.|..|....+..+.+
T Consensus 258 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 325 (334)
T 1ry7_B 258 KHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGFSHHSAWLVV 325 (334)
T ss_dssp ECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCCEEEEEEEEE
T ss_pred ECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCeEEEEEEEEE
Confidence 3 110 000 00000 011237999999999999999999999997644333333
No 221
>3g9v_A Interleukin 22 receptor, alpha 2; cytokine, cytokine receptor, receptor, glycoprotein, polymorphism, secreted, cytokine/cytokine receptor complex; 2.76A {Homo sapiens}
Probab=99.33 E-value=3.1e-12 Score=122.99 Aligned_cols=184 Identities=14% Similarity=0.176 Sum_probs=107.1
Q ss_pred CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe---ecCceEEEEcC--CCCCCeEEEEEE
Q psy8771 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV---VDNNQLTTISD--LTPHTIYTIRVQ 557 (904)
Q Consensus 483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~--L~p~t~Y~~~V~ 557 (904)
.+|.++++...+...+ |+|+++....+....|.|+|+..+. ..|.... ....+.+.|+. +.+...|.++|+
T Consensus 9 p~P~nv~~~s~n~~~i-L~W~p~~~~~~~~~~Y~Vqy~~~~~---~~W~~~~~C~~i~~~~Cdlt~~~~~~~~~Y~~RV~ 84 (211)
T 3g9v_A 9 LKPQRVQFQSRNFHNI-LQWQPGRALTGNSSVYFVQYKIYGQ---RQWKNKEDCWGTQELSCDLTSETSDIQEPYYGRVR 84 (211)
T ss_dssp CCCEEEEEEEETTEEE-EEEECCCC---CCCEEEEEEEETTC---SSCEEEEEEEEECCSEEECTGGGCSTTSCEEEEEE
T ss_pred CCCceeEEEEEcCceE-EEECCCCCCCCCCeEEEEEEEECCC---CceEECccCCCCCCCEECCCCcccccCccEEEEEE
Confidence 3589999988886665 9999987655556789999998752 4566432 24556788864 578999999999
Q ss_pred EEeCCCCCCCCCcEEEecC-CCCCCCCCCceEEecCCCeEEEEEeCCCC----CCCCceEEEEEeccCCCCCcceEEEee
Q psy8771 558 AFTSVGPGPLSAPVLVKTQ-QGVPSQPRDLRAVDIQETAVTLAWSKPTH----SGENIISYELYWNDTYAKPRDLRAVDI 632 (904)
Q Consensus 558 a~~~~g~~~~S~~~~~~t~-~~~p~~p~~~~~~~~~~~~~~l~W~~~~~----~~~~~~~y~v~~~~~~~~p~~l~~~~~ 632 (904)
|.++.+.+.++....|.+. ...+.+| .+.+...+ ++|.|.|.+|.. .+|..
T Consensus 85 A~~~~~~S~ws~~~~f~~~~~t~i~PP-~v~v~~~~-~si~V~~~~P~~~~~~~ng~~---------------------- 140 (211)
T 3g9v_A 85 AASAGSYSEWSMTPRFTPWWETKIDPP-VMNITQVN-GSLLVILHAPNLPYRYQKEKN---------------------- 140 (211)
T ss_dssp EEETTEECCCEECCCBCHHHHCBCCCC-EEECC------CCCEEECCCCGGGGCSSCS----------------------
T ss_pred EECCCCcCCCEecCcccccccCccCCC-EEEEEEcC-CEEEEEEECCCCccccCCCce----------------------
Confidence 9999888888765555542 2344555 48777654 589999999864 11100
Q ss_pred ccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCC--CCCCCCC
Q psy8771 633 QETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR--GEGATTP 705 (904)
Q Consensus 633 ~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~--G~~~~s~ 705 (904)
|.. ..-....|+|.|+..+..............+.|.+|+|++.|.|+|+|+... ..|.+|.
T Consensus 141 --------~~~---~~~~~l~Y~v~y~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Ycv~V~a~~~~~~~~s~~S~ 204 (211)
T 3g9v_A 141 --------VSI---EDYYELLYRVFIINNSLEKEQKVYEGAHRAVEIEALTPHSSYCVVAEIYQPMLDRRSQRSE 204 (211)
T ss_dssp --------SCH---HHHTTCEEEEEEC------CEEEEEESSCCCC----------CEEEEEEETTTTEECCCCC
T ss_pred --------eee---hhcceeEEEEEEEECCCccEEEEEecCCcEEEEecCCCCCeEEEEEEEEeCCCCCcCCCCC
Confidence 000 0001366999988765544333334456788999999999999999999642 2344554
No 222
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.33 E-value=3.5e-10 Score=127.71 Aligned_cols=235 Identities=13% Similarity=0.143 Sum_probs=131.8
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC-----------------CC-----------ceecccccccccceEEEEeeeccCC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP-----------------NG-----------QITHPPTRAARSHARLAAQSVLRRG 87 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~-----------------~g-----------~i~~~~~~~~~~~~~~~~~~~~~~g 87 (904)
....|.|...+.+...|.|.+.... .+ .++.......|...+.|...+..++
T Consensus 16 ~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~ 95 (523)
T 2rcj_C 16 QRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYYCASWNSSDN 95 (523)
T ss_pred CcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEEEEEccCCCc
Confidence 5666677666667788999654210 01 1223333444555555555544322
Q ss_pred ee---eeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC--eEEEeeCCccccCCCCcee----ecc-
Q psy8771 88 RL---AHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP--FVKWRKGQNIELTPDDKLP----VGR- 157 (904)
Q Consensus 88 ~~---~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~i~W~k~~~~~~~~~~~~~----~~~- 157 (904)
.. ..+.+.|.. ....+|.+...+.. ..+.+|+.+.|.|.+.|.|.+ .|+|+|+ |..+..+.+.. ..+
T Consensus 96 ~~~~~~~~~l~V~~-~~~~~P~~~~~~~~-~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~-g~~l~~~~~~~~~~~~~~~ 172 (523)
T 2rcj_C 96 SYVFGTGTKVTVLG-QPKANPTVTLFPPS-SEELQANKATLVCLISDFYPGAVTVAWKAD-GSPVKAGVETTKPSKQSNN 172 (523)
T ss_pred cccccCceEEEecc-CCCcCCeEEecCCc-ccccCCCceEEEEEeccccCCceEEEEecC-CCCCCCceEeccccccCCC
Confidence 11 123333321 12467888777766 677789999999999998765 8999999 66665443321 112
Q ss_pred -----eEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEe--ecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCc-c
Q psy8771 158 -----NVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQC--KYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE-T 227 (904)
Q Consensus 158 -----~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~--~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~-~ 227 (904)
..|.|.++ +|+|.|+|.|.|..|.......+.+.. ...|... +.+|. ..+ .....+.|.+...+. +
T Consensus 173 ~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~-~~~~~-~~~--~~G~~~~l~C~~~g~~P 248 (523)
T 2rcj_C 173 KYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVF-PLAPS-SKS--TSGGTAALGCLVKDYFP 248 (523)
T ss_pred CEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEE-ecCCC-ccc--ccCCceEEEEEEeceeC
Confidence 36889888 699999999999988766655543220 0000000 00111 111 123445555544322 1
Q ss_pred ceEEEEEEEeCCCCCCeE---Eee-c----ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 228 LLYYVIQYKPKAANTPYS---EIS-G----IITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 228 ~~~y~v~~~~~~~~~~~~---~~~-~----~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
. ...|.|...+...... ... . .....+.|.++...+ +.|+|.|.|..|..
T Consensus 249 ~-p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~ 306 (523)
T 2rcj_C 249 Q-PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNT 306 (523)
T ss_pred C-CeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCc
Confidence 1 1134444332211100 000 0 113478999999999 99999999998864
No 223
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.33 E-value=3.8e-11 Score=115.55 Aligned_cols=160 Identities=11% Similarity=0.092 Sum_probs=107.0
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCcee---ecceEEEEeee--cCCeEEEEEEEe
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP---VGRNVLTLDRV--TESENYTCIAAS 177 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~---~~~~~l~i~~l--~d~g~Y~c~a~n 177 (904)
.+|.|...|.. .+.+|++++|.|.+.| |.+.+.|+|+ +..+....+.. ...+.|.|.++ +|+|.|+|.|.|
T Consensus 4 ~~P~i~~~p~~--~v~~G~~v~L~C~~~~-~~~~~~w~k~-g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 3p2t_A 4 PKPTLWAEPGS--VISWGNSVTIWCQGTL-EAREYRLDKE-ESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRS 79 (196)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEECCT-TCCEEEEEET-TSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEccCCC--cCCCCCcEEEEeeCCC-CCCEEEEEEC-CCCCcccccccccCCceEEEEeccCCcccCceEEEEEeC
Confidence 46788877764 7889999999999999 7789999999 55554322211 35678999999 699999999999
Q ss_pred cCcc--eEEEEEEEEEeecCCCCCCCCCCcceEEE----eecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe---E--E
Q psy8771 178 VLGV--IETSTIVKVQCKYAPLLTLPVAPLDVKIS----EVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY---S--E 246 (904)
Q Consensus 178 ~~g~--~~~~~~l~v~~~~~~~~~~P~~p~~l~~~----~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~---~--~ 246 (904)
..|. .+....|.|. ..+.+|. +... ......++|.+...+.+ . .+.|...+..... . .
T Consensus 80 ~~g~~~~s~~~~l~V~-------~~~~~p~-~~~~~~~~v~~G~~v~L~C~~~~~~-~--~~~w~k~g~~~~~~~~~~~~ 148 (196)
T 3p2t_A 80 PVGWSQPSDPLELVMT-------GAYSKPT-LSALPSPLVTSGKSVTLLCQSRSPM-D--TFLLCKERAAHPLLCLRSEH 148 (196)
T ss_dssp TTEEBCCCCCEEEEEE-------CSSCCCE-EEEESCSEECTTCCEEEEEEEEEEE-E--EEEEEETTCCCGGGSEEEEE
T ss_pred CCcccCCCccEEEEec-------CCCCCCE-EEeCCcceecCCCeEEEEEecCCCC-C--EEEEEeCCCcccceeecccc
Confidence 9883 3455666666 2222221 1111 12345677777654322 2 3445444322111 1 1
Q ss_pred eecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771 247 ISGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277 (904)
Q Consensus 247 ~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g 277 (904)
........|.|.+++..+.+.|+|.|.|..+
T Consensus 149 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 149 GAQQHQAEFPMSPVTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp EEEEEEEEEEECSCCGGGCEEEEEEEECGGG
T ss_pred cccCcceEEEeCCCcccCCCeEEEEEEcCCC
Confidence 1223457799999999999999999999876
No 224
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.33 E-value=1.7e-11 Score=126.55 Aligned_cols=224 Identities=13% Similarity=0.055 Sum_probs=135.6
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC-------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEE
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP-------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFS 108 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~-------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~ 108 (904)
....|.|...+ .|.|.+.... ++.+........|.....|...+ |....+.+.+. .+|.+.
T Consensus 28 ~~v~l~C~~~~----~i~W~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n---g~~~~~~l~V~-----~~~~~~ 95 (290)
T 2o26_X 28 DTLSLTCIDPD----FVRWTFKTYFNEMVENKKNEWIQEKAEATRTGTYTCSNSN---GLTSSIYVFVR-----DPAKLF 95 (290)
T ss_dssp SCEEEEEECTT----EEEEEEECSSSCEEEECSSEEEETTCCGGGCEEEEEEESS---SCEEEEEEEEE-----CSSCCB
T ss_pred CcEEEEECCCC----cEEEecCCcceeeecCCCceEEEeccCHHhCeEEEEEeeC---CccEEEEEEEe-----CCCccc
Confidence 44455555443 8999876432 24455555555555555555555 55555556654 344444
Q ss_pred cCCCCceEEecCCCeEEEEEEccCCC-CeEEEe-eCCccccCCCCceee-cceEEEEeee--cCCe-EEEEEEEecCcce
Q psy8771 109 IPPPALLEVMLDSPLNLSCVAVGSPM-PFVKWR-KGQNIELTPDDKLPV-GRNVLTLDRV--TESE-NYTCIAASVLGVI 182 (904)
Q Consensus 109 ~~~~~~~~~~~g~~~~l~C~~~g~p~-p~i~W~-k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g-~Y~c~a~n~~g~~ 182 (904)
..+.+ +.+.+|+.+.|.|.+.| |. +.|+|+ ++ +..+..+.++.. .++.|.|.++ +|+| .|+|.|.|..|..
T Consensus 96 ~~~~~-~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~-g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~ 172 (290)
T 2o26_X 96 LVGLP-LFGKEDSDALVRCPLTD-PQVSQYSLIECD-GKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWL 172 (290)
T ss_dssp CCCCC-EEEETTSCEEECCCBSC-CSCEEEEEEETT-SCCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEE
T ss_pred ccccc-eEEecCCeEEEeCcCCC-CCCceEEEEeCC-CcCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceE
Confidence 55556 88999999999999997 77 999995 56 777777666654 4578999999 6999 9999999986553
Q ss_pred E-EEEEEEEEee--cCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC----CCeE----Ee---e
Q psy8771 183 E-TSTIVKVQCK--YAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN----TPYS----EI---S 248 (904)
Q Consensus 183 ~-~~~~l~v~~~--~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~----~~~~----~~---~ 248 (904)
. ....|.|... ..|.+. ..|.+..+ .....++|.+...+.+... .+.|...+.. .... .. .
T Consensus 173 ~s~~~~l~V~~~~~~~P~i~--~~~~~~~v--~~G~~v~l~C~~~g~p~p~-~i~W~~~~~~~~~~~~~~~~~~~~~~~~ 247 (290)
T 2o26_X 173 HSDKFTLKVREAIKAIPVVS--VPETSHLL--KKGDTFTVVCTIKDVSTSV-NSMWLKMNPQPQHIAQVKHNSWHRGDFN 247 (290)
T ss_dssp ECCCEEEEEECCCCSCCEEE--CSCSBCCC--CTTCCEEEEEEEEESSTTC-EEEEEEESSSEEECCCEECCEEEEETTE
T ss_pred EeEEEEEEEEeCCCCCCccc--cCCCcceE--ecCCcEEEEEEEecCCcce-eEEEecCCCCCccceeecccccccCcee
Confidence 3 3467776611 111111 11222211 2234455555543222211 1233322211 0100 00 1
Q ss_pred cceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 249 GIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 249 ~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
......|.|.++...+.+.|+|.|.|..|..
T Consensus 248 ~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~ 278 (290)
T 2o26_X 248 YERQETLTISSARVDDSGVFMCYANNTFGSA 278 (290)
T ss_dssp EEEEEEEEESSCCSSSCEEEEEEEECSSCEE
T ss_pred eEEEEEEEEcCCCcccCeEEEEEEeCCCCcE
Confidence 1334689999999999999999999998865
No 225
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=2.6e-12 Score=107.82 Aligned_cols=89 Identities=25% Similarity=0.425 Sum_probs=75.6
Q ss_pred CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCce-eecceEEEEeee--cCCeEEEEEEE
Q psy8771 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKL-PVGRNVLTLDRV--TESENYTCIAA 176 (904)
Q Consensus 100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~-~~~~~~l~i~~l--~d~g~Y~c~a~ 176 (904)
.+..||.|...|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....+. ..+...|.|.++ +|+|.|+|.|.
T Consensus 7 ~~~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 84 (99)
T 2yr3_A 7 GMEVAPSFSSVLKD-CAVIEGQDFVLQCSVRGTPVPRITWLLN-GQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAE 84 (99)
T ss_dssp CCCEEEEEEECCCC-EEECTTCCEEEECEEEEESCCCCEEEES-SSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEE
T ss_pred CcccCCceeecCCC-CEEeCCCeEEEEEEEeeeCCCeEEEEEC-CEECcccceEeeCCeEEEEECCCChhhCEEEEEEEE
Confidence 34678999998888 9999999999999999999999999999 6666544433 335678999999 69999999999
Q ss_pred ecCcceEEEEEEEE
Q psy8771 177 SVLGVIETSTIVKV 190 (904)
Q Consensus 177 n~~g~~~~~~~l~v 190 (904)
|..|..+..+.|.|
T Consensus 85 N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 85 NALGQVSCSAWVTV 98 (99)
T ss_dssp CSSCEEEEECCEEE
T ss_pred ECCCeEEEEEEEEE
Confidence 99999888877776
No 226
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.33 E-value=1.1e-11 Score=106.02 Aligned_cols=100 Identities=21% Similarity=0.214 Sum_probs=76.0
Q ss_pred CCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCC-ceeeEEE
Q psy8771 578 GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGE-NIISYEL 656 (904)
Q Consensus 578 ~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~-~~~~y~v 656 (904)
..|.+|..+++..++.+++.|+|.++.+ .++ .+.+|.|
T Consensus 6 ~~P~~P~~p~~~~~~~~sv~l~W~~p~~-----------------------------------------~~~~~i~~Y~v 44 (109)
T 1x5x_A 6 SGPSMPASPVLTKAGITWLSLQWSKPSG-----------------------------------------TPSDEGISYIL 44 (109)
T ss_dssp CCCCCCCCCEEEEECSSEEEEECCCCSS-----------------------------------------CCSSSSCEEEE
T ss_pred CCCcCCCCCEEEEccCCEEEEEEcCCCC-----------------------------------------CCCCcccEEEE
Confidence 3455666666666677777777776654 444 6788888
Q ss_pred EEEeCCcc-ccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCC
Q psy8771 657 YWNDTYAK-AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGA 718 (904)
Q Consensus 657 ~~~~~~~~-~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~ 718 (904)
+|+..+.. .+..........+++.+|++++.|.|+|+|+|..|.|.+|..+.++|...+|..
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~T~~~~P~~ 107 (109)
T 1x5x_A 45 EMEEETSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDSGPS 107 (109)
T ss_dssp EECCSSSSCCCEEEEEESCSEEEEESCCSSCEEEEEEEEECSSCEEEECCCEEEECCCCCCCC
T ss_pred EEecCCCCcceEEeEeCCccEEEECCCCCCCEEEEEEEEEeCCCCcCCccCEEeEeCCCCCCC
Confidence 88876543 333344455679999999999999999999999999999999999998887763
No 227
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.33 E-value=2.8e-11 Score=130.66 Aligned_cols=150 Identities=17% Similarity=0.290 Sum_probs=114.9
Q ss_pred CCCCCcEEEeccCCceEEEEeCCCCC--------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCe
Q psy8771 35 TAPRDVQVRPLSSSTMVIQWDEPETP--------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQ 106 (904)
Q Consensus 35 ~~p~~l~~~~~~~~s~~v~W~~~~~~--------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~ 106 (904)
+....|.|...+.+.+.+.|.+.... ++.+........+.....|...+..+.....+.+.+ ..+|.
T Consensus 222 G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V-----~~~p~ 296 (382)
T 1cs6_A 222 GQMVTLECFAFGNPVPQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIII-----HAQPD 296 (382)
T ss_dssp TCCEEEECEEEEESCCEEEEEECCSCCSCCCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE-----EEEEE
T ss_pred CCeEEEEEEEccCCCCEEEEEECCcccccEEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEE-----ecCCC
Confidence 35667777777788889999765322 233444444444555555555444333333444444 45788
Q ss_pred EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEE
Q psy8771 107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIET 184 (904)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~ 184 (904)
|...+.. ..+.+|+.++|.|.+.|.|.|.|.|+|+ +..+....++.+.++.|.|.++ +|+|.|+|.|.|..|...+
T Consensus 297 ~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~ 374 (382)
T 1cs6_A 297 WLDVITD-TEADIGSDLRWSCVASGKPRPAVRWLRD-GQPLASQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHGTVYA 374 (382)
T ss_dssp EEECCCC-EEEETTCCEEEECEEEEESCCEEEEEET-TEECCCCSSEEEETTEEEESSCCGGGCEEEEEEEEETTEEEEE
T ss_pred cccCCCc-cEEcCCCeEEEEEEeeeecCCEEEEEEC-CEECCCCceEEEECCEEEECcCCcccCEEEEEEEEeCCCeEEE
Confidence 8888887 8999999999999999999999999999 7788877888888889999999 6999999999999999999
Q ss_pred EEEEEEE
Q psy8771 185 STIVKVQ 191 (904)
Q Consensus 185 ~~~l~v~ 191 (904)
.+.|.|.
T Consensus 375 ~~~l~V~ 381 (382)
T 1cs6_A 375 SAELTVQ 381 (382)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999886
No 228
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.32 E-value=3.7e-11 Score=114.17 Aligned_cols=156 Identities=11% Similarity=0.094 Sum_probs=105.7
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecC
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVL 179 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~ 179 (904)
..+|.|...|. ..+.+|++++|.|.+.| |.+.+.|+|+ +.. .....+.|.|.++ +|+|.|+|.|.|..
T Consensus 6 ~~~P~i~~~p~--~~v~~G~~v~L~C~~~~-~~~~~~W~k~-g~~------~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 75 (184)
T 2gi7_A 6 LPKPSLQALPS--SLVPLEKPVTLRCQGPP-GVDLYRLEKL-SSS------RYQDQAVLFIPAMKRSLAGRYRCSYQNGS 75 (184)
T ss_dssp BCCCEEEEESC--SEEETTCCEEEEEECST-TCSEEEEEET-TTC------CEESSSEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCCCeEEeCCC--ccccCCCcEEEEEeCCC-CCCEEEEEEC-Ccc------ccCcccEEEECcCChhhCceEEEEEEcCC
Confidence 56788887776 47899999999999998 7889999999 443 2346789999999 69999999999988
Q ss_pred cc--eEEEEEEEEEeecCCCCCCCCCCcceEEE----eecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceec
Q psy8771 180 GV--IETSTIVKVQCKYAPLLTLPVAPLDVKIS----EVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITT 253 (904)
Q Consensus 180 g~--~~~~~~l~v~~~~~~~~~~P~~p~~l~~~----~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~ 253 (904)
|. .+....|.|. ..+.+|. +... ......++|.+...+.+. . +.|...+..............
T Consensus 76 g~~~~s~~~~l~V~-------~~~~~p~-i~~~p~~~v~~G~~v~l~C~~~~~~~-~--~~w~k~g~~~~~~~~~~~~~~ 144 (184)
T 2gi7_A 76 LWSLPSDQLELVAT-------GVFAKPS-LSAQPGPAVSSGGDVTLQCQTRYGFD-Q--FALYKEGDPAPYKNPERWYRA 144 (184)
T ss_dssp EEBCCCCCEEEEEE-------SSSCCCE-EEEECCCSSCCTTCEEEEEECSSCCC-E--EEEEECCCCTTSCCCCEEEEE
T ss_pred CccCCCCCEEEEec-------CcCCCCE-EEeCCCceecCCCcEEEEEEcCCCCc-E--EEEEECCCcCcceecCCCceE
Confidence 64 2345666665 2222222 1111 122457788887654332 3 344443322211111122346
Q ss_pred eEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771 254 YYTVRNLSPYTEYEFYIIAVNNLGR 278 (904)
Q Consensus 254 ~~~i~~L~p~~~Y~~~v~a~n~~g~ 278 (904)
.|.|.+++..+.+.|+|.|.|..+.
T Consensus 145 ~L~i~~v~~~D~G~Y~C~a~n~~~~ 169 (184)
T 2gi7_A 145 SFPIITVTAAHSGTYRCYSFSSRDP 169 (184)
T ss_dssp SSSEEEETTCCSEEEEEEEECTTST
T ss_pred EEEEccCCccCCeEEEEEEEeCCCC
Confidence 6889999999999999999998653
No 229
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=5.1e-12 Score=109.95 Aligned_cols=88 Identities=33% Similarity=0.595 Sum_probs=76.9
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC-CCCcee-ecceEEEEeee--cCCeEEEEEEEe
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT-PDDKLP-VGRNVLTLDRV--TESENYTCIAAS 177 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~-~~~~~~-~~~~~l~i~~l--~d~g~Y~c~a~n 177 (904)
..||.|...|.+ +.+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+. ...++. ..++.|.|.++ +|+|.|+|.|.|
T Consensus 6 ~~pP~i~~~p~~-~~v~~G~~v~l~C~~~g~p~p~i~W~k~-g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (118)
T 2eo9_A 6 SGPPVIRQGPVN-QTVAVDGTFVLSCVATGSPVPTILWRKD-GVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIAST 83 (118)
T ss_dssp CCSCCCSBCCCC-EEEETTCEEEEECBCCCSSCCEEEEEES-SSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEEC
T ss_pred CCCCEEEcCCCC-EEEcCCCeEEEEEEEEecCCCEEEEEEC-CEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEc
Confidence 578999988888 9999999999999999999999999999 66654 344554 46779999999 699999999999
Q ss_pred cCcceEEEEEEEEE
Q psy8771 178 VLGVIETSTIVKVQ 191 (904)
Q Consensus 178 ~~g~~~~~~~l~v~ 191 (904)
..|.....+.|.|.
T Consensus 84 ~~g~~~~~~~l~V~ 97 (118)
T 2eo9_A 84 PSGEATWSAYIEVQ 97 (118)
T ss_dssp SSCEEEEECCEEEE
T ss_pred CCCcEEEEEEEEEE
Confidence 99999888889888
No 230
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.32 E-value=9.2e-12 Score=108.55 Aligned_cols=108 Identities=22% Similarity=0.311 Sum_probs=89.5
Q ss_pred CCCCCeEEEecCCceEEEEecCCCCC-CC------c--eeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEE
Q psy8771 483 TAPRDVQVRPLSSSTMVIQWDEPETP-NG------Q--ITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYT 553 (904)
Q Consensus 483 ~~p~~l~v~~~~~~~~~l~W~~p~~~-~~------~--i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~ 553 (904)
....++.+..++.+++.|+|.+|... +| . +..|.|+|...... ..+.....+..++++|.+|+|++.|.
T Consensus 19 s~v~~p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~--~~~~~~~~g~~ts~~v~~L~P~T~Y~ 96 (137)
T 1wk0_A 19 SNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKD--GKYKSVYVGEETNITLNDLKPAMDYH 96 (137)
T ss_dssp TCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTT--SCCEEEEEESCSEEEECSCCTTCEEC
T ss_pred CCCCCcEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCC--CceEEEEecCccEEEEcCCCCCCEEE
Confidence 45567889999999999999997654 33 2 58999999776432 34555556888999999999999999
Q ss_pred EEEEEEeCCCCCCCCCcEEEecCCCCCCCCCCceEEecC
Q psy8771 554 IRVQAFTSVGPGPLSAPVLVKTQQGVPSQPRDLRAVDIQ 592 (904)
Q Consensus 554 ~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p~~~~~~~~~ 592 (904)
|+|+|+|..|.|++|..+.|+|....|..|..+++...+
T Consensus 97 ~rV~A~n~~G~G~~S~~~~f~T~~~~P~~P~~p~l~~~t 135 (137)
T 1wk0_A 97 AKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRISGPS 135 (137)
T ss_dssp EEEEEEETTEECCCCCCCCEECCCSSSCCCSCSCCCSCC
T ss_pred EEEEEEeCCCcCCCCCCEEEECCCCCCCCCCCCEEeCCC
Confidence 999999999999999999999999999888888776543
No 231
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.32 E-value=8.8e-12 Score=119.72 Aligned_cols=165 Identities=19% Similarity=0.345 Sum_probs=112.0
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCceee--cceEEEEeee--cCCeEEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPV--GRNVLTLDRV--TESENYTCIAA 176 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~ 176 (904)
..+|.|...+.. +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+.. ..++.+ +...|.|.++ +|+|.|+|.+.
T Consensus 5 ~~~P~i~~~~~~-~~~~~G~~v~l~C~~~~~p~~~i~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 5 PKAPVITTPLET-VDALVEEVATFMCAVESYPQPEISWTRN-KILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp CEEEEESSCCCE-EEEETTSCEEEECCEEEESCCEEEEEET-TEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEE
T ss_pred CCCceeecCccc-eeeeCCCcEEEEeeCCCCCCCeEEEEEC-CEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEE
Confidence 457888888877 9999999999999999999999999999 555543 455554 4557999999 69999999999
Q ss_pred ecCcc-eEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEEeecce
Q psy8771 177 SVLGV-IETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSEISGII 251 (904)
Q Consensus 177 n~~g~-~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~~~~~~ 251 (904)
|..|. ......|.|.... ... ..|..+.+. ....+.|.+...+.+.. .+.|...+. ...... ..
T Consensus 83 ~~~~~~~~~~~~l~v~~~p--~~~--~~~~~~~~~--~g~~~~l~C~~~g~p~~--~v~W~~~~~~~~~~~~~~~---~~ 151 (192)
T 2iep_A 83 NGVGGAVESCGALQVKMKP--KIT--RPPINVKII--EGLKAVLPCTTMGNPKP--SVSWIKGDSALRENSRIAV---LE 151 (192)
T ss_dssp CSSSCCEEEEEEEEEEEEE--EEE--ECCCCEEEE--TTSCEEECCEEEEESCC--EEEEEETTEECCCCSSEEE---CT
T ss_pred cCCCceeEeEEEEEEEeCC--ccc--cCCcceEEe--CCCcEEEEEEEeccCCc--eEEEEeCCEEccCCCcEEE---ec
Confidence 99887 4566677776321 111 123344333 23345555554322222 244443321 111111 12
Q ss_pred eceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 252 TTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
...+.|.++...+.+.|+|.|.|..|..
T Consensus 152 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 179 (192)
T 2iep_A 152 SGSLRIHNVQKEDAGQYRCVAKNSLGTA 179 (192)
T ss_dssp TSCEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred CCcEEEecCChhhCEEEEEEEEcCCCcE
Confidence 2469999999999999999999998865
No 232
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=99.32 E-value=1.6e-11 Score=107.08 Aligned_cols=103 Identities=21% Similarity=0.363 Sum_probs=72.7
Q ss_pred CCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCc-eeeEE
Q psy8771 577 QGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGEN-IISYE 655 (904)
Q Consensus 577 ~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~-~~~y~ 655 (904)
...|.+|.++.+...+.+ +.|+|++|.. .++. +.+|.
T Consensus 5 ~~~P~~P~~~~~~~~~~t-v~l~W~~P~~-----------------------------------------~~G~pI~~Y~ 42 (122)
T 2e3v_A 5 SSGPSSPSIDQVEPYSST-AQVQFDEPEA-----------------------------------------TGGVPILKYK 42 (122)
T ss_dssp -CCCCCCEEEEEEECSSC-EEEEEECCCC-----------------------------------------C--CCEEEEE
T ss_pred CcCCcCCCccEEEecCCc-EEEEECCCCc-----------------------------------------CCCCcceEEE
Confidence 345666777777776666 7777777754 4554 88999
Q ss_pred EEEEeCCccccceE-E----ecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCC
Q psy8771 656 LYWNDTYAKAKHHR-R----IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQ 721 (904)
Q Consensus 656 v~~~~~~~~~~~~~-~----~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~ 721 (904)
|+|+..+...+... . ....+.++|.+|+|++.|.|+|+|+|..|.|.+|..+.++|....++.+|.
T Consensus 43 v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~t~~~~~P~~P~ 113 (122)
T 2e3v_A 43 AEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQPVREPSAPK 113 (122)
T ss_dssp EEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCC---
T ss_pred EEEEECCCCCcccceeeeeecCccceEEeCCCCCCCEEEEEEEEEeCCccCCCcccccccccCCCCCCCCe
Confidence 99988765544211 1 134679999999999999999999999999999998888666544443454
No 233
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=6.9e-12 Score=105.41 Aligned_cols=89 Identities=25% Similarity=0.509 Sum_probs=77.1
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC-CCCcee-ecceEEEEeee--cCCeEEEEEEE
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT-PDDKLP-VGRNVLTLDRV--TESENYTCIAA 176 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~-~~~~~~-~~~~~l~i~~l--~d~g~Y~c~a~ 176 (904)
...||.|...|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+. ...++. ..++.|.|.++ +|+|.|+|.|.
T Consensus 5 ~~~~P~i~~~p~~-~~v~~G~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (100)
T 2edj_A 5 SSGPPIILQGPAN-QTLAVDGTALLKCKATGDPLPVISWLKE-GFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVAT 82 (100)
T ss_dssp CCSSCEEEECCCC-EEEESSSEEEECCEEECSSCCEEEEEES-SSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEE
T ss_pred CCCCCEEEeCcCC-EEEcCCCcEEEEEEEEEcCCCEEEEEEC-CEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEE
Confidence 3678999999988 9999999999999999999999999999 55554 344444 36778999999 69999999999
Q ss_pred ecCcceEEEEEEEEE
Q psy8771 177 SVLGVIETSTIVKVQ 191 (904)
Q Consensus 177 n~~g~~~~~~~l~v~ 191 (904)
|..|..+..+.|.|.
T Consensus 83 n~~g~~~~~~~l~V~ 97 (100)
T 2edj_A 83 SSSGETSWSAVLDVT 97 (100)
T ss_dssp CSSCCCBCCEEEEEE
T ss_pred cCCCCEEEEEEEEEe
Confidence 999999999999887
No 234
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.32 E-value=2.2e-12 Score=107.80 Aligned_cols=93 Identities=20% Similarity=0.327 Sum_probs=78.1
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe---ecCceEEEEcCCCCCCeEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV---VDNNQLTTISDLTPHTIYTIRV 556 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~L~p~t~Y~~~V 556 (904)
.|+.+|.+|.+.. ..+++.|+|.+|.+.++.+.+|.|+|+..+ ..|.... ....+++.+.+|.+++.|.|+|
T Consensus 6 ep~~pP~~l~v~~-~~~sv~L~W~pP~~~~~~I~gY~vey~~~~----~~W~~~~~~~~~~~t~~~v~~L~pg~~Y~FRV 80 (108)
T 1v5j_A 6 SGLSPPRGLVAVR-TPRGVLLHWDPPELVPKRLDGYVLEGRQGS----QGWEVLDPAVAGTETELLVPGLIKDVLYEFRL 80 (108)
T ss_dssp CCCCCCEEEEEEE-CSSSEEEEEECCSCCSSCCCBEEEEEEETT----CCCEEEEEEECSSCCEEECCCCCTTSCEECCB
T ss_pred CCCCCCcceEEEE-eCCEEEEEECCCCCCCCCCcEEEEEEEeCC----CCcEEeeeecCCCcCEEEeCCCCCCCEEEEEE
Confidence 4568999999876 567999999999887789999999999843 4565433 3567889999999999999999
Q ss_pred EEEeCCCCCCCCCcEEEecCC
Q psy8771 557 QAFTSVGPGPLSAPVLVKTQQ 577 (904)
Q Consensus 557 ~a~~~~g~~~~S~~~~~~t~~ 577 (904)
+|+|..|.|..|..+.+.|..
T Consensus 81 ~A~n~~G~s~pS~~~~v~T~~ 101 (108)
T 1v5j_A 81 VAFAGSFVSDPSNTANVSTSG 101 (108)
T ss_dssp EEEETTEEEEECSCCCCCCSS
T ss_pred EEEcCCCCcCCCCCEEEEeCC
Confidence 999999999999988887754
No 235
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=4.6e-12 Score=108.74 Aligned_cols=95 Identities=25% Similarity=0.392 Sum_probs=80.3
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCcee--e-c--ceEEEEeee--cCCeEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP--V-G--RNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~--~-~--~~~l~i~~l--~d~g~Y~c~ 174 (904)
..+|.|...|.+ +.+.+|+.++|.|.+.|.|.|.|.|+|+ +..+....+.. . . ...|.|.++ +|+|.|+|.
T Consensus 7 ~~~P~i~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 84 (110)
T 2dm3_A 7 GFRPHFLQAPGD-LTVQEGKLCRMDCKVSGLPTPDLSWQLD-GKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCI 84 (110)
T ss_dssp CCCCEEEECCCE-EEEESSSCBCCEEEEECSSCCEEECBBS-SSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEE
T ss_pred CCCCcEEeCCCc-EEEeCCCEEEEEEEEEEcCCCEEEEEEC-CEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEE
Confidence 578999999888 9999999999999999999999999999 66665544332 1 2 348999999 699999999
Q ss_pred EEecCcceEEEEEEEEEeecCCCCCCCCCCc
Q psy8771 175 AASVLGVIETSTIVKVQCKYAPLLTLPVAPL 205 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~ 205 (904)
|.|..|..+..+.|.|. ..|.+|.
T Consensus 85 a~n~~g~~~~~~~l~V~-------~~p~~P~ 108 (110)
T 2dm3_A 85 ATNRAGQNSFSLELVVA-------AKESGPS 108 (110)
T ss_dssp EECSSCEEEECCEEEEE-------CCCCSSS
T ss_pred EECCCCEEEEEEEEEEe-------CCCCCCC
Confidence 99999999999999999 6666664
No 236
>1eer_B Epobp, erythropoietin receptor; signal transduction, hematopoietic cytokine, cytokine receptor class 1, complex (cytokine/receptor); 1.90A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1cn4_A 2jix_B 1eba_A* 1ern_A 1ebp_A
Probab=99.32 E-value=4.1e-11 Score=117.86 Aligned_cols=186 Identities=15% Similarity=0.173 Sum_probs=127.8
Q ss_pred CCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE--ee---cCceEEEE--cCCCCCCeEEEE
Q psy8771 483 TAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ--VV---DNNQLTTI--SDLTPHTIYTIR 555 (904)
Q Consensus 483 ~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~--~~---~~~~~~~~--~~L~p~t~Y~~~ 555 (904)
..|.+|.....+...+.++|+++.+.++...+|.|.|+..+.. ...+... .. .....+.+ .++...+.|.|+
T Consensus 22 ~~P~nl~C~~~~~~~l~C~W~~~~~~~~~~~~y~l~y~~~~~~-~~~C~~~~~~~~~~~~~~~C~~~~~~~~~~~~y~~~ 100 (227)
T 1eer_B 22 RGPEELLCFTERLEDLVCFWEEAASAGVGPGQYSFSYQLEDEP-WKLCRLHQAPTARGAVRFWCSLPTADTSSFVPLELR 100 (227)
T ss_dssp HSTTSCEEEBSSSSCCEEEEEESCCSSCCTTSEEEEEEETTSC-CEEECEEEEEETTTEEEEEEECCGGGCCBSSCEEEE
T ss_pred cCCcCCeEECCCCCEEEEEecCCCCCCCCCccEEEEEEcCCCC-ceeccceeccCCCCCceEEEEeCCCcceeeEEEEEE
Confidence 3688999999888999999999876544668999999875321 1111111 11 11223444 467889999999
Q ss_pred EEEEeCCCCCCCCCcEEEecCC-CCCCCCCCceEEecC-CCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeec
Q psy8771 556 VQAFTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDIQ-ETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQ 633 (904)
Q Consensus 556 V~a~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~~-~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~ 633 (904)
|.|.++. + .....+.... ..|.+|.++.+...+ .+.+.|+|.+|...
T Consensus 101 V~a~~~~--~--~~~~~~~~~~~v~p~pP~~l~~~~~~~~~~l~v~W~~P~~~--------------------------- 149 (227)
T 1eer_B 101 VTAASGA--P--RYHRVIHINEVVLLDAPVGLVARLADESGHVVLRWLPPPET--------------------------- 149 (227)
T ss_dssp EEETTSC--E--EEEEEECGGGSEECCCCEEEEEEECSSTTCEEEEEECCSSC---------------------------
T ss_pred EEecCCC--c--cEEEEEEeeeeEccCcCcceEEEEcCCCCeEEEEEcCCCCc---------------------------
Confidence 9986532 2 1122343333 257889999998874 78999999988530
Q ss_pred cceEEEeccCCCCCCCceeeEEEEEEeCCccccce--EEecccceEEEeCCCCCcEEEEEEEEEcCC----C-CCCCCCC
Q psy8771 634 ETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHH--RRIGLVETYSLTGLYPNTLYYIWLAAQSPR----G-EGATTPP 706 (904)
Q Consensus 634 ~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~--~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~----G-~~~~s~~ 706 (904)
....+..|.|+|+..+...+.. ......+.+.|.+|+|++.|.|+|+|.... | .|.+|..
T Consensus 150 -------------~~~~~l~Yev~y~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~~~g~wS~WS~~ 216 (227)
T 1eer_B 150 -------------PMTSHIRYEVDVSAGQGAGSVQRVEILEGRTECVLSNLRGRTRYTFAVRARMAEPSFGGFWSEWSEP 216 (227)
T ss_dssp -------------SCGGGEEEEEEEECCSSSCCCCEEEECTTCCEEEECCCCSSCEEEEEEEEEECTTTCCEECCCCCCC
T ss_pred -------------ccccceEEEEEEEcCCCCCcEEEEEEecCceEEEEcccCCCCeEEEEEEEeECCCCCCCcCCCCCCC
Confidence 1123789999999876554432 334556789999999999999999999651 3 2788988
Q ss_pred eeEEecC
Q psy8771 707 IPVRTKQ 713 (904)
Q Consensus 707 ~~~~t~~ 713 (904)
+.+.|..
T Consensus 217 ~~~~t~~ 223 (227)
T 1eer_B 217 VSLLTPS 223 (227)
T ss_dssp EEEEC--
T ss_pred EEEECcc
Confidence 8888843
No 237
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.32 E-value=1.4e-11 Score=119.45 Aligned_cols=161 Identities=16% Similarity=0.147 Sum_probs=102.9
Q ss_pred EcCCCCceEEecCCCeEEEEEEccCCC-----CeEEEeeCCccccCCCCceee-------cceEEEEeee--cCCeEEEE
Q psy8771 108 SIPPPALLEVMLDSPLNLSCVAVGSPM-----PFVKWRKGQNIELTPDDKLPV-------GRNVLTLDRV--TESENYTC 173 (904)
Q Consensus 108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~-----p~i~W~k~~~~~~~~~~~~~~-------~~~~l~i~~l--~d~g~Y~c 173 (904)
..++.. +.+.+|+++.|.|.+.|.|. +.|.|+|+++.......|+.+ ++.+|.|.++ +|+|.|+|
T Consensus 6 ~~p~~~-v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 84 (202)
T 3bp6_B 6 TAPKEV-YTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRC 84 (202)
T ss_dssp ECSCSE-EEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEE
T ss_pred ecCCcC-EEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEE
Confidence 334445 89999999999999999987 899999943555544455543 3378999999 69999999
Q ss_pred EEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEE-EeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEe--ecc
Q psy8771 174 IAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKI-SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEI--SGI 250 (904)
Q Consensus 174 ~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~-~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~--~~~ 250 (904)
.|.|..|..+....|.|. ..+..|. +.+ .......+.|.+...+.+. -.|.|...+........ ...
T Consensus 85 ~~~~~~~~~~~~~~l~V~-------~~~~~p~-~~~~~~~~g~~v~l~C~~~g~P~--p~v~W~~~~~~~~~~~~~~~~~ 154 (202)
T 3bp6_B 85 LVICGAAWDYKYLTVKVK-------ASYMRID-TRILEVPGTGEVQLTCQARGYPL--AEVSWQNVSVPANTSHIRTPEG 154 (202)
T ss_dssp EEEETTEEEEEEEEEEEE-------BCCCCEE-EEEEECTTTCCEEEEEEEEEBSC--CEEEETTCCSCCEEEEEECTTS
T ss_pred EEEeCCCcceEEEEEEec-------CCCCccc-EEEEecCCCCeEEEEEEccccCC--ceEEEEeCCCCccCceeeCCCC
Confidence 999999988888888887 3333332 222 2223445555555432222 13444433221111111 111
Q ss_pred eeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 251 ITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 251 ~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
....+.+..+...+.+.|+|.|.|..|..
T Consensus 155 ~~~~~~i~~v~~~d~G~Y~C~a~N~~g~~ 183 (202)
T 3bp6_B 155 LYQVTSVLRLKPQPSRNFSCMFWNAHMKE 183 (202)
T ss_dssp CEEEEEEEEECCCTTCCEEEEEEETTTTE
T ss_pred CEEEEEEEEEEcCCCCEEEEEEEcCCccc
Confidence 12334566788888999999999998864
No 238
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=2e-11 Score=105.29 Aligned_cols=106 Identities=21% Similarity=0.345 Sum_probs=82.6
Q ss_pred eeeecCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeE
Q psy8771 473 PVRTKQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIY 552 (904)
Q Consensus 473 ~~~t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y 552 (904)
...+.+...|.+|.++++...+ +++.|+|++|...+|.+.+|.|+|+.... ..+........+++.|.+|.|++.|
T Consensus 9 ~~~t~e~~~P~~P~~l~~~~~~-~sv~l~W~~P~~~ng~i~gY~i~y~~~~~---~~~~~~~~~~~~~~~l~~L~p~t~Y 84 (116)
T 2edb_A 9 ENDLDESQVPDQPSSLHVRPQT-NCIIMSWTPPLNPNIVVRGYIIGYGVGSP---YAETVRVDSKQRYYSIERLESSSHY 84 (116)
T ss_dssp SSSCBCSSCCCCCSCEEEEECS-SCEEEEECCCSCTTBCCCEEEEEEEESST---TSEEEEEETTCCEEEECSCCSSSBE
T ss_pred cccCCCCCCCCCCCCeEEEECC-CEEEEEEcCCCCCCCceeEEEEEEEeCCC---CeEEEEeCCCeeEEEeCCCCCCCEE
Confidence 3344442344699999999998 99999999998888899999999986431 2233444577788999999999999
Q ss_pred EEEEEEEeCCCCCCCCCcEEEecCCCCCCCC
Q psy8771 553 TIRVQAFTSVGPGPLSAPVLVKTQQGVPSQP 583 (904)
Q Consensus 553 ~~~V~a~~~~g~~~~S~~~~~~t~~~~p~~p 583 (904)
.|+|+|+|..|.|..+. ..+.|....|.++
T Consensus 85 ~~~V~A~n~~G~g~~~~-~~~~T~~~~P~p~ 114 (116)
T 2edb_A 85 VISLKAFNNAGEGVPLY-ESATTRSITSGPS 114 (116)
T ss_dssp EEEEEEEETTEECSCEE-ECCBCCCSSSCSC
T ss_pred EEEEEEEeCCccCCCCc-ceeecccCCCCCC
Confidence 99999999999987554 4566766666654
No 239
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.32 E-value=9.8e-12 Score=104.29 Aligned_cols=89 Identities=21% Similarity=0.339 Sum_probs=77.4
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEE
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~ 174 (904)
+..+|.|...+.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.+. ...|.|.++ +|+|.|+|.
T Consensus 3 ~~~~P~i~~~~~~-~~v~~G~~~~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (99)
T 3puc_A 3 ISSKPVIVTGLQD-TTVSSDSVAKFAVKATGEPRPTAIWTKD-GKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCT 80 (99)
T ss_dssp CCEEEEEEECCCC-EEEESSSCEEEEEEEEEESCCEEEEEET-TEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCCCEEEecCcc-EEEeCCCcEEEEEEEEecCCCEEEEEEC-CEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEE
Confidence 3567889998888 9999999999999999999999999999 7777766666542 237999998 699999999
Q ss_pred EEecCcceEEEEEEEEE
Q psy8771 175 AASVLGVIETSTIVKVQ 191 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~ 191 (904)
|.|..|.....+.|.|.
T Consensus 81 a~n~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 81 VKNSAGSVSSSCKLTIK 97 (99)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEeCCCcEeEEEEEEEE
Confidence 99999999999888886
No 240
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.31 E-value=5.1e-12 Score=108.04 Aligned_cols=89 Identities=30% Similarity=0.531 Sum_probs=67.6
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--cceEEEEeee--cCCeEEEEEEE
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--GRNVLTLDRV--TESENYTCIAA 176 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~ 176 (904)
+..+|.|...+.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.. .++.|.|.++ +|+|.|+|.|.
T Consensus 7 ~~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 84 (108)
T 3kvq_A 7 ERVAPTITGNLEN-QTTSIGESIEVSCTASGNPPPQIMWFKD-NETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQAC 84 (108)
T ss_dssp ----CCCBSCCCC-EEEETTCCEEEECBCC----CCEEEEES-SSBCCCBTTEEEETTTTEEEECSCCGGGCEEEEEEEC
T ss_pred ccCCCceecCCCC-eEEeCCCeEEEEEECcCcCCCeEEEEEC-CeEcccCCCeEEeCCCcEEEEeecCcccCEEEEEEEE
Confidence 4678999988888 9999999999999999999999999999 666655555443 5678999999 69999999999
Q ss_pred ecCcceEEEEEEEEE
Q psy8771 177 SVLGVIETSTIVKVQ 191 (904)
Q Consensus 177 n~~g~~~~~~~l~v~ 191 (904)
|..|.....+.|.|.
T Consensus 85 n~~g~~~~~~~l~V~ 99 (108)
T 3kvq_A 85 SVLGCAKVEAFFIIE 99 (108)
T ss_dssp ----CEEEEEEEEEE
T ss_pred eCCCceEEEEEEEEe
Confidence 999999999999998
No 241
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.31 E-value=8.6e-12 Score=106.41 Aligned_cols=89 Identities=29% Similarity=0.521 Sum_probs=78.2
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-cce---EEEEeee--cCCeEEEEE
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-GRN---VLTLDRV--TESENYTCI 174 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-~~~---~l~i~~l--~d~g~Y~c~ 174 (904)
...||.|...+.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.+ .++ .|.|.++ +|+|.|+|.
T Consensus 10 ~~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 87 (107)
T 3irg_B 10 QGSPPCFLRFPRP-VRVVSGAEAELKCVVLGEPPPVVVWEKG-GQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCR 87 (107)
T ss_dssp CCEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCCeeEcCCcc-EEEeCCCeEEEEEEEeecCCCEEEEEEC-CeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEE
Confidence 4678999999988 9999999999999999999999999999 777776666664 233 7999998 699999999
Q ss_pred EEecCcceEEEEEEEEE
Q psy8771 175 AASVLGVIETSTIVKVQ 191 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~ 191 (904)
|.|..|.....+.|.|.
T Consensus 88 a~n~~g~~~~~~~l~V~ 104 (107)
T 3irg_B 88 ARNAAGEAYAAAAVTVL 104 (107)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEcCCCcEEEEEEEEEE
Confidence 99999999999989887
No 242
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=99.31 E-value=1e-10 Score=112.89 Aligned_cols=178 Identities=14% Similarity=0.143 Sum_probs=113.3
Q ss_pred CCCCeEEEec-CCceEEEEecCCCCCCCcee-eEEEEEEeCCCCCC--------cceEEEee--cCceEEEEcCCCCCCe
Q psy8771 484 APRDVQVRPL-SSSTMVIQWDEPETPNGQIT-GYKVYYTQDQSLPM--------SAWETQVV--DNNQLTTISDLTPHTI 551 (904)
Q Consensus 484 ~p~~l~v~~~-~~~~~~l~W~~p~~~~~~i~-~Y~v~~~~~~~~~~--------~~~~~~~~--~~~~~~~~~~L~p~t~ 551 (904)
.|.||..... ....+..+|++..+.+ ... .|.+.|......-. .....-.. .....+.+..|...+.
T Consensus 3 ~~~nlsC~~~~~~~~~~C~W~~g~~~~-l~t~~~~l~~~~~~~~c~~~~~~~~~~~~~~C~~~~~~~~~C~~~~~~~~~~ 81 (206)
T 3v6o_A 3 VNINISCETDGYLTKMTCRWSTSTIQS-LAESTLQLRYHRSSLYCSDIPSIHPISEPKDCYLQSDGFYECIFQPIFLLSG 81 (206)
T ss_dssp -CCCCEEEECTTSSCEEEEECCCC---------EEEEEEECSSCCCSSCCCCSSCEEECEEECTTSCEEEEECSCCTTSC
T ss_pred CCEEEEEEECCCCcEEEEEecCCCcCC-cccccEEEEEEEcCcCccccccccccCcCCCCCCCCCCCceEEeCcHHhccc
Confidence 5678888777 5689999999965432 223 78888876431000 00000011 3345788989988999
Q ss_pred EEEEEEEEeCCCCCCCCCcEEEec-CCCCCCCCCCceEEec-CCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEE
Q psy8771 552 YTIRVQAFTSVGPGPLSAPVLVKT-QQGVPSQPRDLRAVDI-QETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRA 629 (904)
Q Consensus 552 Y~~~V~a~~~~g~~~~S~~~~~~t-~~~~p~~p~~~~~~~~-~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~ 629 (904)
|.|+|.|.|..|.+. |....+.. ....|.+|.++.+... ..+.+.|+|..|..
T Consensus 82 Y~~~V~a~N~~G~~~-s~~~~~~~~~~vkp~pP~~l~v~~~~~~~~l~l~W~~P~~------------------------ 136 (206)
T 3v6o_A 82 YTMWIRINHSLGSLD-SPPTCVLPDSVVKPLPPSSVKAEITINIGLLKISWEKPVF------------------------ 136 (206)
T ss_dssp EEEEEEEC---CCEE-CCCEEECGGGGBCCCCCCSCEEEEETTTTEEEEEC-----------------------------
T ss_pred EEEEEEEEcCCcccc-CCcccEeecceEcCCCCCceEeEEecCCCeEEEEECCCCC------------------------
Confidence 999999999998654 56666653 3345778999988765 57899999998753
Q ss_pred EeeccceEEEeccCCCCCCCceeeEEEEEEeCCc-cccceEEecc--cceEEEeCCCCCcEEEEEEEEEcCCCCCCCCC
Q psy8771 630 VDIQETAVTLAWSKPTHSGENIISYELYWNDTYA-KAKHHRRIGL--VETYSLTGLYPNTLYYIWLAAQSPRGEGATTP 705 (904)
Q Consensus 630 ~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~-~~~~~~~~~~--~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~ 705 (904)
. .....|.|+|+..+. ..+....... ...+.|.+|+|++.|.|+|+|.+..|.|.+|+
T Consensus 137 -----------------~-~~~l~yev~y~~~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~~~~~G~WSe 197 (206)
T 3v6o_A 137 -----------------P-ENNLQFQIRYGLSGKEVQWKMYEVYDAKSKSVSLPVPDLCAVYAVQVRCKRLDGLGYWSN 197 (206)
T ss_dssp ---------------------CEEEEEEEEESSSSCCCEEEEECC---CEEEECCSCTTSCEEEEEEEEETTSCSCCCC
T ss_pred -----------------C-CCcEEEEEEEEECCCCCceEEEecccCcceeEEeecCCCCCEEEEEEEEecCCCCCcCCC
Confidence 1 235799999998763 3443333222 24689999999999999999999877765553
No 243
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.31 E-value=2.5e-11 Score=117.15 Aligned_cols=162 Identities=15% Similarity=0.169 Sum_probs=100.1
Q ss_pred cCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCcee--ecceEEEEeee--cCCeEEEEEEEecCcceEE
Q psy8771 109 IPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP--VGRNVLTLDRV--TESENYTCIAASVLGVIET 184 (904)
Q Consensus 109 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~--~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~ 184 (904)
..|.+.+.+.+|+.++|.|.+.|.|.|.|.|++..+..+. .+.. ...+.|.|.++ +|+|.|+|.|.|..|..+.
T Consensus 5 i~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~--~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 82 (202)
T 1vca_A 5 TTPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLN--GKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEK 82 (202)
T ss_dssp EESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCCS--SEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred ECCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCcc--ceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEee
Confidence 3445535556999999999999999999999995333322 2222 24567999998 6999999999999998888
Q ss_pred EEEEEEEeecCCCCCCCCCCcceE-EEeecCCeEEEEEeCCCc-cceEEEEEEEeCCCCCCeEEee--------cceece
Q psy8771 185 STIVKVQCKYAPLLTLPVAPLDVK-ISEVTATSVRLDWTYPSE-TLLYYVIQYKPKAANTPYSEIS--------GIITTY 254 (904)
Q Consensus 185 ~~~l~v~~~~~~~~~~P~~p~~l~-~~~~~~~sv~l~W~~~~~-~~~~y~v~~~~~~~~~~~~~~~--------~~~~~~ 254 (904)
.+.|.|. ..|..+.-.. ........++|.+...+. +.....|.|...+......... ......
T Consensus 83 ~~~l~V~-------~~p~~~~~~~~~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (202)
T 1vca_A 83 GIQVEIY-------SFPKDPEIHLSGPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLE 155 (202)
T ss_dssp EEEEEEE-------BCCSCCEEEESSCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEE
T ss_pred EEEEEEE-------eCCCCCEeCCceEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEE
Confidence 8888887 3332221100 011223445555554321 2222344554432110000000 112344
Q ss_pred EEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 255 YTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 255 ~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
+.|......+...|+|+|.|..|..
T Consensus 156 l~i~~~~~d~~g~ytC~A~n~~~~~ 180 (202)
T 1vca_A 156 VTFTPVIEDIGKVLVCRAKLHIDEM 180 (202)
T ss_dssp EEECCCGGGTTCEEEEEEEECSCCC
T ss_pred EEEEeeeccCCCeEEEEEEccccCC
Confidence 6778777778889999999988764
No 244
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.31 E-value=9.4e-12 Score=119.63 Aligned_cols=156 Identities=12% Similarity=0.025 Sum_probs=94.1
Q ss_pred eEEecCCCeEEEEE---EccCCCCeEEEeeCCccccCC-----------------CCcee----ecceEEEEeee--cCC
Q psy8771 115 LEVMLDSPLNLSCV---AVGSPMPFVKWRKGQNIELTP-----------------DDKLP----VGRNVLTLDRV--TES 168 (904)
Q Consensus 115 ~~~~~g~~~~l~C~---~~g~p~p~i~W~k~~~~~~~~-----------------~~~~~----~~~~~l~i~~l--~d~ 168 (904)
+++..|++++|.|. +.|.|.+.|+|+|+ |..... ..++. .+...|.|.++ +|+
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGPEIEVSWFKL-GPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCSTTSEEEEEEE-ETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred eEEEcCCCEEEEeeeeccCCCCCcEEEEEEc-CCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 78999999999995 66899999999998 432210 01111 13457999999 799
Q ss_pred eEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC--------
Q psy8771 169 ENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA-------- 240 (904)
Q Consensus 169 g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~-------- 240 (904)
|.|+|.|.|..|.....+.|.|.... ... ..|.+..+ .....++|.+...+.|.. .|.|...++
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~p~--~~~--~~~~~~~v--~~g~~~~l~C~~~G~P~P--~v~W~~~~~~~~~~~~~ 153 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVKPL--TLS--VHSERSQF--PDFSVLTVTCTVNAFPHP--HVQWLMPEGVEPAPTAA 153 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEE--EEE--EEEEECCS--SCSCCEEEEEEEEEESCC--EEEECCC----------
T ss_pred eEEEEEEEcCCCcEEEEEEEEecCCc--eee--ecceeEEE--cCCCEEEEEEEcCCCCCC--EEEEEECCeeecCcccc
Confidence 99999999999999998888887211 000 01111111 111233444333222211 233322110
Q ss_pred CCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 241 NTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 241 ~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
...+....++.-..+.+.++++.+.+.|+|.|.|..|+.
T Consensus 154 ~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a 192 (203)
T 4fa8_A 154 NGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEA 192 (203)
T ss_dssp --CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEE
T ss_pred cceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEE
Confidence 111222222332345667899999999999999999974
No 245
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.31 E-value=7.4e-11 Score=121.77 Aligned_cols=224 Identities=11% Similarity=0.129 Sum_probs=135.2
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC---------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCe
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP---------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQ 106 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~---------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~ 106 (904)
....|.|...+ .|.|.++... ++.+........+.....|...+...+....+.+.+.. +|.
T Consensus 20 ~~v~L~C~~~~----~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~-----~~~ 90 (289)
T 3ejj_X 20 ETVTLRCVSNG----SVEWDGPISPYWTLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKD-----PAH 90 (289)
T ss_dssp CCEEEEEECSS----CCEEECSCSSSSEECCCSSCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECC-----SSC
T ss_pred CCEEEEEEeCC----cEEEccCCCceEEEeccCCccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeC-----CCc
Confidence 45555555433 4999866322 23344444555555555555554444445555666543 332
Q ss_pred -EEcCCCCceEEecCCCeEEEEEEccCCCCe-EEEeeCCccccCCCCceee-cceEEEEeee--cCCeEEEEEEE-ecCc
Q psy8771 107 -FSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAA-SVLG 180 (904)
Q Consensus 107 -~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~-n~~g 180 (904)
+...+.. ..+.+|+.+.|.|.+.|.|.+. |.|++.++..+....++.. .++.|.|.++ +|+|.|+|.|. +..+
T Consensus 91 ~~~~~~~~-~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~ 169 (289)
T 3ejj_X 91 SWNLLAQE-VTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRE 169 (289)
T ss_dssp SEEESCSE-EEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred ceecccce-EEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCc
Confidence 5555655 9999999999999999988775 9998754777766666654 5678999998 69999999999 5555
Q ss_pred ceEEEEEEEEEeecCCCCCCC-CCC------cceEEEeecCCeEEEEEeCCC-ccceEEEEEEEeCCCCCC--eEE----
Q psy8771 181 VIETSTIVKVQCKYAPLLTLP-VAP------LDVKISEVTATSVRLDWTYPS-ETLLYYVIQYKPKAANTP--YSE---- 246 (904)
Q Consensus 181 ~~~~~~~l~v~~~~~~~~~~P-~~p------~~l~~~~~~~~sv~l~W~~~~-~~~~~y~v~~~~~~~~~~--~~~---- 246 (904)
..+....|.|. ..+ .+| ....+ .....++|.+...+ .+. ..+.|...+.... ...
T Consensus 170 ~~~~~~~l~V~-------~~~~~~p~i~~~~~~~~~--~~g~~~~l~C~~~~~~p~--~~i~W~~~~~~~~~~~~~~~~~ 238 (289)
T 3ejj_X 170 STSTGIWLKVN-------RVHPEPPQIKLEPSKLVR--IRGEAAQIVCSATNAEVG--FNVILKRGDTKLEIPLNSDFQD 238 (289)
T ss_dssp EECCCEEEEEE-------SSCCCCCEEEEESSSEEC--CSSSCEEEEEEEEESSSC--CEEEEEETTEECCCCEEEEECS
T ss_pred cccccEEEEEE-------ECCCCCCeEEecCCceEE--EeCCcEEEEEEeCCCCCc--eEEEEEECCEEeeccCCccccc
Confidence 56677777777 211 122 11111 12334444444322 111 1344443321110 000
Q ss_pred eecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 247 ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 247 ~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
........+.|.++...+.+.|+|.|.|..|...
T Consensus 239 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 272 (289)
T 3ejj_X 239 NYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRT 272 (289)
T ss_dssp SSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEE
T ss_pred ceEEeeEEEEEEeecccCCEEEEEEEEcCCCCcc
Confidence 0112246799999999999999999999998654
No 246
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=1.1e-11 Score=107.82 Aligned_cols=89 Identities=20% Similarity=0.294 Sum_probs=72.6
Q ss_pred CCCCCeEEcC--CCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCcee--ec--ceEEEEeee--cCCeEEE
Q psy8771 101 RRVPPQFSIP--PPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP--VG--RNVLTLDRV--TESENYT 172 (904)
Q Consensus 101 ~~~~P~~~~~--~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~--~~--~~~l~i~~l--~d~g~Y~ 172 (904)
+..+|.|... +...+.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+. ..++. .. ...|.|.++ +|+|.|+
T Consensus 18 v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~-g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 95 (118)
T 2e7c_A 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKG-GAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYE 95 (118)
T ss_dssp CSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEET-TEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEE
T ss_pred eccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEEC-CEECC-CCcEEEEECCCeEEEEECCCChhcCEEEE
Confidence 4568888653 22339999999999999999999999999999 66665 23333 22 446999999 6999999
Q ss_pred EEEEecCcceEEEEEEEEE
Q psy8771 173 CIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 173 c~a~n~~g~~~~~~~l~v~ 191 (904)
|.|.|..|..+..+.|.|.
T Consensus 96 C~a~N~~G~~~~~~~l~V~ 114 (118)
T 2e7c_A 96 LSVQIENMKDTATIRIRVV 114 (118)
T ss_dssp EEEECSSCEECCEEEEEEE
T ss_pred EEEEeCCCeEEEEEEEEEE
Confidence 9999999999999999988
No 247
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.30 E-value=9.7e-12 Score=123.53 Aligned_cols=181 Identities=18% Similarity=0.281 Sum_probs=116.4
Q ss_pred CCCCeEEcCC----CCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc-----eeecceEEEEeee--cCCeE
Q psy8771 102 RVPPQFSIPP----PALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK-----LPVGRNVLTLDRV--TESEN 170 (904)
Q Consensus 102 ~~~P~~~~~~----~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~-----~~~~~~~l~i~~l--~d~g~ 170 (904)
..+|.|...+ .. ..+.+|+++.|.|.+.|.|.+.|.|+|+ +..+....+ ...+...|.|.++ +|+|.
T Consensus 13 ~~~P~~~~~~~~~~~~-~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 90 (231)
T 3ojm_B 13 KRAPYWTNTEKMEKRL-HAVPAANTVKFRCPAGGNPMPTMRWLKN-GKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGN 90 (231)
T ss_dssp CEEEEESCGGGGCCSC-EEEETTSCEEEECCEEEESCCEEEEEET-TEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEE
T ss_pred ccCCccccccccCcee-EEEccCCCEEEEEecccCCCCeEEEEEC-CccccccccccceeeecCcceEEEecCCcccCEE
Confidence 4567776665 45 8999999999999999999999999999 666644332 2235568999999 69999
Q ss_pred EEEEEEecCcceEEEEEEEEEeecCC-CCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEe----CCC-----
Q psy8771 171 YTCIAASVLGVIETSTIVKVQCKYAP-LLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKP----KAA----- 240 (904)
Q Consensus 171 Y~c~a~n~~g~~~~~~~l~v~~~~~~-~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~----~~~----- 240 (904)
|+|.+.|..|.......|.|...... .......|....+.. ...+.|.+...+.+... +.|.. .+.
T Consensus 91 Y~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~--g~~~~l~C~~~~~p~p~--v~W~~~~~~~g~~~~~~ 166 (231)
T 3ojm_B 91 YTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVV--GGDVEFVCKVYSDAQPH--IQWIKHVEKNGSKYGPD 166 (231)
T ss_dssp EEEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEET--TCCEEEECCEECSSCCE--EEEEEECCBTTBSBCTT
T ss_pred EEEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEe--CCcEEEEEEEecCCCCE--EEEEECCCCCCccccCC
Confidence 99999999999888888888721110 000111233443332 34456655543322222 33332 110
Q ss_pred CCCeEE-e-----ecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEe
Q psy8771 241 NTPYSE-I-----SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT 288 (904)
Q Consensus 241 ~~~~~~-~-----~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~ 288 (904)
...... . .......+.|.++...+.+.|+|.|.|..|....+..+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 220 (231)
T 3ojm_B 167 GLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIGQANQSAWLTVL 220 (231)
T ss_dssp SCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccceEeeEEEEEEe
Confidence 011111 0 11223569999999999999999999999875433333343
No 248
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.30 E-value=7.6e-12 Score=105.17 Aligned_cols=88 Identities=22% Similarity=0.375 Sum_probs=74.2
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc--eee-cc--eEEEEeee--cCCeEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK--LPV-GR--NVLTLDRV--TESENYTCI 174 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~--~~~-~~--~~l~i~~l--~d~g~Y~c~ 174 (904)
..||.|...|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....+ +.. .+ ..|.|.++ +|+|.|+|.
T Consensus 3 ~~~P~~~~~p~~-~~~~~G~~~~l~C~~~g~p~p~v~W~~~-g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 80 (100)
T 2kdg_A 3 MGPPRFIQVPEN-MSIDEGRFCRMDFKVSGLPAPDVSWYLN-GRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACV 80 (100)
T ss_dssp CEEEECCCCCCC-EEEETTCCEEEEEECEEESCCEEEEEET-TEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCeEEeCCCC-EEecCCCEEEEEEEEEeeCCCEEEEEEC-CEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEE
Confidence 457888888888 9999999999999999999999999999 666655432 222 23 38999998 699999999
Q ss_pred EEecCcceEEEEEEEEE
Q psy8771 175 AASVLGVIETSTIVKVQ 191 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~ 191 (904)
|.|..|..+..+.|.|.
T Consensus 81 a~n~~g~~~~~~~l~V~ 97 (100)
T 2kdg_A 81 AKNRAGEATFTVQLDVL 97 (100)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEcCCCeEEEEEEEEEE
Confidence 99999999999999887
No 249
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.30 E-value=2.5e-11 Score=127.12 Aligned_cols=189 Identities=15% Similarity=0.173 Sum_probs=122.3
Q ss_pred CcceeeeccceEEEEecC-----CCCCcc---e-eeEeeCCCCCCCCcEEEe------ccCCceEEEEeCCCCC------
Q psy8771 2 DTRCYVESPEEVFIILCP-----LPPLIP---G-YILVTEPGTAPRDVQVRP------LSSSTMVIQWDEPETP------ 60 (904)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~-----~~p~~~---~-~~~~~~p~~~p~~l~~~~------~~~~s~~v~W~~~~~~------ 60 (904)
.|+|.+.+......+-.. .+|.+. . ........+....|.|.. .+.+.+.|.|.+....
T Consensus 76 ~Y~C~a~n~~g~~~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~ 155 (315)
T 1itb_B 76 HYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNI 155 (315)
T ss_dssp CCEECCCSSSCCCCEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSS
T ss_pred EEEEEEeCCceEEEEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccc
Confidence 589999987643333222 333321 1 111111222444555554 5677889999765311
Q ss_pred -----CCceecccccccccceEEEEeeeccCCeee----eeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEcc
Q psy8771 61 -----NGQITHPPTRAARSHARLAAQSVLRRGRLA----HAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG 131 (904)
Q Consensus 61 -----~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g 131 (904)
++.+........+.....|...+...|... ...+.+.......+|.|...+.+.+.+.+|+.+.|.|.+.|
T Consensus 156 ~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g 235 (315)
T 1itb_B 156 HFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVTG 235 (315)
T ss_dssp SEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEEE
T ss_pred eEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEec
Confidence 233444444445555555666544455442 22233333334688999888775468999999999999999
Q ss_pred CCCCeEEEeeCCccccCCCCce------ee----------cceEEEEeee--cC-CeEEEEEEEecCcceEEEEEEEEE
Q psy8771 132 SPMPFVKWRKGQNIELTPDDKL------PV----------GRNVLTLDRV--TE-SENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 132 ~p~p~i~W~k~~~~~~~~~~~~------~~----------~~~~l~i~~l--~d-~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
.|.|.|.|+++ |..+....+. .. ..+.|.|.++ +| +|.|+|.|.|..|.....+.|.|.
T Consensus 236 ~P~p~i~W~~~-g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~ 313 (315)
T 1itb_B 236 QLSDIAYWKWN-GSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIYP 313 (315)
T ss_dssp CTTSEEEEEET-TEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEECC
T ss_pred CCCCeeEEEEC-CEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEEec
Confidence 99999999999 7766654321 11 2348999998 68 999999999999999999888875
No 250
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=99.30 E-value=2.9e-11 Score=101.42 Aligned_cols=89 Identities=27% Similarity=0.427 Sum_probs=74.4
Q ss_pred CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT 796 (904)
Q Consensus 718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~ 796 (904)
.+|.+|++...+.+++.|+|++|. ..||.+.+|.|+|...+.... .....+. ..++++|.+|+|++.|.|+|+|.|
T Consensus 9 ~~P~~l~v~~~t~~Sv~lsW~~p~--~~~g~i~~Y~v~y~~~~~~~~-~~~~~v~~~~ts~~l~~L~p~t~Y~~~V~A~~ 85 (103)
T 3t04_D 9 SVPTKLEVVDATPTSLKISWDAYY--SSWQNVKYYRITYGETGGDSP-VQEFTVPGYYSTATISGLKPGVDYTITVYAYD 85 (103)
T ss_dssp CCCCSCEEEEEETTEEEEECTTTT--TTSCCCCEEEEEEEETTCSSC-CEEEEEETTCCEEEECSCCTTCCEEEEEEEES
T ss_pred CCCceeEEEecCCCEEEEEccCCC--CCCCccceEEEEEEECCCCCc-cEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence 378999999999999999999984 468899999999998754322 2334455 889999999999999999999999
Q ss_pred C--CCCCCCCCcEEee
Q psy8771 797 S--IGDGPSSYPITIR 810 (904)
Q Consensus 797 ~--~g~g~~s~~~~~~ 810 (904)
. .|.|+ |.++.+.
T Consensus 86 ~~~~G~~~-S~p~~~~ 100 (103)
T 3t04_D 86 TFFPGYEP-NSPISIN 100 (103)
T ss_dssp CCCTTCCC-SCCEEEE
T ss_pred CCCCCCCC-CCCEEEe
Confidence 9 89888 8777653
No 251
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.30 E-value=1.6e-11 Score=120.59 Aligned_cols=173 Identities=18% Similarity=0.302 Sum_probs=114.1
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC----CceeecceEE----EEeee--cCCeEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD----DKLPVGRNVL----TLDRV--TESENY 171 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~----~~~~~~~~~l----~i~~l--~d~g~Y 171 (904)
..||.|...|.+ +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+... .++...++.+ .|.++ +|+|.|
T Consensus 7 ~~~P~i~~~p~~-~~v~~G~~v~L~C~~~g~p~~~v~W~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 84 (217)
T 2vr9_A 7 YQSPRIIEHPTD-LVVKKNEPATLNCKVEGKPEPTIEWFKD-GEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEY 84 (217)
T ss_dssp CCCCEEEECCCC-EEECTTSCEEECCEEECSSCCEEEEEET-TEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEE
T ss_pred cCCCEEecCCCc-eEEeCCCcEEEEEEcCCCCCCeEEEEEC-CcCccCCCccceeEEecCCceEEEEEeccCCcccCceE
Confidence 678999999988 9999999999999999999999999999 6665442 3444444444 46666 699999
Q ss_pred EEEEEecCcceE-EEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeC-CCccceEEEEEEEeCCCC--------
Q psy8771 172 TCIAASVLGVIE-TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTY-PSETLLYYVIQYKPKAAN-------- 241 (904)
Q Consensus 172 ~c~a~n~~g~~~-~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~-~~~~~~~y~v~~~~~~~~-------- 241 (904)
+|.|.|..|... ..+.|.|...... ....|....+ .....+.|.+.. .+.+... +.|...+..
T Consensus 85 ~C~~~n~~g~~~~~~~~l~v~~~~~~---~~~~~~~~~~--~~g~~v~l~C~~~~g~p~~~--v~W~~~g~~~~~~~~~~ 157 (217)
T 2vr9_A 85 WCVAKNRVGQAVSRHASLQIAVLRDD---FRVEPKDTRV--AKGETALLECGPPKGIPEPT--LIWIKDGVPLDDLKAMS 157 (217)
T ss_dssp EEEEEETTEEEECCCEEEEECEECCS---CSBCCCCEEE--CTTSCEEECCBCCCEESCCE--EEEEETTEEECCCCCC-
T ss_pred EEEEecCCCccccccceEEEEEeCCC---cEECCCccEE--cCCCeEEEEEECCCCCCCCe--EEEEECCcCCCcccccc
Confidence 999999988753 3566666522111 1112333333 234456666665 2222222 334332210
Q ss_pred ----CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeE
Q psy8771 242 ----TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAV 286 (904)
Q Consensus 242 ----~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~ 286 (904)
.... . .....+.|.++...+.+.|+|.|.|..|....+....
T Consensus 158 ~~~~~~~~-~--~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~l 203 (217)
T 2vr9_A 158 FGASSRVR-I--VDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKL 203 (217)
T ss_dssp --CCCSEE-E--ETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEE
T ss_pred cccCCcEE-e--cCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEE
Confidence 1111 1 1235799999999999999999999999765444333
No 252
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.30 E-value=2e-11 Score=103.96 Aligned_cols=102 Identities=21% Similarity=0.360 Sum_probs=81.8
Q ss_pred cCCCCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEe-ecCceEEEEcCCCCCCeEEEE
Q psy8771 477 KQYEPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQV-VDNNQLTTISDLTPHTIYTIR 555 (904)
Q Consensus 477 ~~~~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~ 555 (904)
....| .+|. +.+...+.+++.|+|++|.+.++.+.+|.|+|+..+. ..|.... ....+++.|.+|.|++.|.|+
T Consensus 4 ~~~~P-~~p~-~~v~~~~~~sv~l~W~~p~~~~g~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 78 (107)
T 2dn7_A 4 GSSGP-GRPT-MMISTTAMNTALLQWHPPKELPGELLGYRLQYCRADE---ARPNTIDFGKDDQHFTVTGLHKGTTYIFR 78 (107)
T ss_dssp CCCCC-CCCE-EEEEECSTTEEEEEEECCSSCSSCCCEEEEEEEETTC---SSCEEEEEETTCCEEEEECCCTTCEEEEE
T ss_pred CCCCC-CCCc-EeEEecCCCEEEEEECCCCCCCCceeEEEEEEEECCC---CCCEEEEeCCCccEEEeCCCCCCCEEEEE
Confidence 34455 4555 7777778999999999998778899999999998764 3444433 366778999999999999999
Q ss_pred EEEEeCCCCCCCCCcEEEecCCCCCCCCC
Q psy8771 556 VQAFTSVGPGPLSAPVLVKTQQGVPSQPR 584 (904)
Q Consensus 556 V~a~~~~g~~~~S~~~~~~t~~~~p~~p~ 584 (904)
|+|+|..|.|.+|. ..+.|....|.+|.
T Consensus 79 V~A~n~~G~g~~s~-~~~~T~~~~P~~p~ 106 (107)
T 2dn7_A 79 LAAKNRAGLGEEFE-KEIRTPEDLSGPSS 106 (107)
T ss_dssp EEEEETTEEEEEEE-EEEECCCCCCCCCC
T ss_pred EEEEcCCcccCCee-eEEeCCCCCCCCCC
Confidence 99999999998887 56788777777664
No 253
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.30 E-value=1.9e-11 Score=118.35 Aligned_cols=86 Identities=17% Similarity=0.204 Sum_probs=72.9
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEccC-CCCeEEEeeCCccccCCCCceeec--ceEEEEeee--cCCeEEEEEEEe
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIELTPDDKLPVG--RNVLTLDRV--TESENYTCIAAS 177 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~~~~~~~~~--~~~l~i~~l--~d~g~Y~c~a~n 177 (904)
.+|.|...+ + ..+.+|+.+.|.|.+.|. |.|.|+|+|+ +..+..+.++... ...|.|.++ +|+|.|+|.|.|
T Consensus 116 ~~P~~~~~~-~-~~v~~g~~v~l~C~v~g~~P~p~i~W~k~-g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 192 (207)
T 3rbs_A 116 QGPHFVEYL-S-WEVTGECNVLLKCKVANIKKETHIVWYKD-EREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKD 192 (207)
T ss_dssp TSSEEEEEE-E-EEEETTTEEEEEEEEESCCTTCEEEEEET-TEEECCCCCCCCSSEEEEEEETTCCGGGCEEEEEEEEE
T ss_pred CCCceEecC-C-cEEcCCCcEEEEEEEeCCCCCCEEEEEEC-CEECCCCCceEcCCCEEEEEECCCCcccCEEEEEEEEc
Confidence 478888766 4 889999999999999999 9999999999 7777666665543 347999999 799999999999
Q ss_pred cCcceEEEEEEEEE
Q psy8771 178 VLGVIETSTIVKVQ 191 (904)
Q Consensus 178 ~~g~~~~~~~l~v~ 191 (904)
..|...+++.|.+.
T Consensus 193 ~~G~~~~~~~L~~~ 206 (207)
T 3rbs_A 193 DRGKDKSRLKLVDE 206 (207)
T ss_dssp TTEEEEEEEEECCC
T ss_pred CCCEEEEEEEEecC
Confidence 99999998888653
No 254
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.29 E-value=9.5e-12 Score=148.35 Aligned_cols=171 Identities=19% Similarity=0.186 Sum_probs=63.0
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEcc--CCCCeEEEeeCCccccCCCCce------------eecceEEEEeee--cC
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAVG--SPMPFVKWRKGQNIELTPDDKL------------PVGRNVLTLDRV--TE 167 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g--~p~p~i~W~k~~~~~~~~~~~~------------~~~~~~l~i~~l--~d 167 (904)
+|.+...|...+.+.+|+.++|.|.+.| .|.+.|.|+++ +..+...... ......|.|.++ +|
T Consensus 223 ~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 301 (772)
T 3v2a_R 223 IYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYP-SSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSD 301 (772)
T ss_dssp EEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC---------CEEEEC-----CCCEEEEEEEEESSCCSTT
T ss_pred cceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecC-CccCCCceeeeccccccccccceEEEEEEEECcCCcCC
Confidence 3444444443379999999999999998 45678999999 5444332211 224557999998 69
Q ss_pred CeEEEEEEEecCcceEEEEEEEEEeecCCCCCC-CCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE
Q psy8771 168 SENYTCIAASVLGVIETSTIVKVQCKYAPLLTL-PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE 246 (904)
Q Consensus 168 ~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~-P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~ 246 (904)
+|.|+|.+.|..|..+..+.|.|.. .|.... +..+..+.+... ..++|.+...+.+.. .+.|...+.......
T Consensus 302 ~G~Y~C~~~~~~~~~~~~~~l~V~~--~p~~~~~~~~~~~~~v~~G--~~v~l~C~~~~~p~~--~v~W~~~g~~l~~~~ 375 (772)
T 3v2a_R 302 QGLYTCAASSGLMTKKNSTFVRVHE--KPFVAFGSGMESLVEATVG--ERVRIPAKYLGYPPP--EIKWYKNGIPLESNH 375 (772)
T ss_dssp CSEEEEEEECSSCEEEEEEEEEEEC--CCC--------------------------------------------------
T ss_pred CeEEEEEEEcCCcceeEEEEEEEeC--CCeeEeccCCCCcEEEcCC--CcEEEEEEEeeeCCC--eEEEEECCEeCCCCc
Confidence 9999999999999888888888872 111111 111122323322 344555544322222 233333221111000
Q ss_pred eecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCC
Q psy8771 247 ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPS 282 (904)
Q Consensus 247 ~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s 282 (904)
.. .....+.|.++...+.+.|+|.|.|..|....+
T Consensus 376 ~~-~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s 410 (772)
T 3v2a_R 376 TI-KAGHVLTIMEVSERDTGNYTVILTNPISKEKQS 410 (772)
T ss_dssp ------------------------------------
T ss_pred eE-ccceeEEEecCChhcCceEEEEEEECCcCeEEE
Confidence 01 123678999999999999999999998865433
No 255
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.29 E-value=6.5e-11 Score=115.67 Aligned_cols=154 Identities=16% Similarity=0.268 Sum_probs=110.7
Q ss_pred CCCCcEEEeccCCceEEEEeCCCC----C----------CC--ceecccccc-cccceEEEEeeeccCC-eeeeeeeecc
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPET----P----------NG--QITHPPTRA-ARSHARLAAQSVLRRG-RLAHAVRQVA 97 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~----~----------~g--~i~~~~~~~-~~~~~~~~~~~~~~~g-~~~~~~~~v~ 97 (904)
....|.|...+.+.+.|.|.+... . +| .+....... .+.....|...+.... ....+.+.+.
T Consensus 22 ~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~ 101 (212)
T 2yd1_A 22 GVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIY 101 (212)
T ss_dssp SCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEE
T ss_pred CEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEe
Confidence 566777777777888999976521 1 22 133333344 4444555555544433 3445555554
Q ss_pred CCC--CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC-CCceeecceEEEEeee--cCCeEEE
Q psy8771 98 DPV--RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP-DDKLPVGRNVLTLDRV--TESENYT 172 (904)
Q Consensus 98 ~~~--~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~-~~~~~~~~~~l~i~~l--~d~g~Y~ 172 (904)
... ...+|.|...+.. ..+..|+.+.|.|.+.|.|.|.|.|+++ +..+.. ..++...++.|.|.++ +|+|.|+
T Consensus 102 ~~~~~~~~~p~~~~~~~~-~~~~~g~~v~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 179 (212)
T 2yd1_A 102 EGDKTPAGFPVITQGPGT-RVIEVGHTVLMTCKAIGNPTPNIYWIKN-QTKVDMSNPRYSLKDGFLQIENSREEDQGKYE 179 (212)
T ss_dssp CTTCSCTTCCEEEECCCC-EEEETTCCEEECCEEECSSCCEEEEEET-TEECCTTSTTEEEETTEEEECSCCGGGCEEEE
T ss_pred cccCCCCCCCeeEeCCCc-eEeecCCeEEEEEEeccCCCCeEEEEEC-CeEcccCCCeEEccCCeEEEccCChhhCEEEE
Confidence 321 1234888888877 8999999999999999999999999999 555543 5667777889999999 6999999
Q ss_pred EEEEecCcceEEE-EEEEEE
Q psy8771 173 CIAASVLGVIETS-TIVKVQ 191 (904)
Q Consensus 173 c~a~n~~g~~~~~-~~l~v~ 191 (904)
|.|.|..|...+. +.|.|.
T Consensus 180 C~a~N~~G~~~s~~~~l~V~ 199 (212)
T 2yd1_A 180 CVAENSMGTEHSKATNLYVK 199 (212)
T ss_dssp EEEEETTEEEECCCEEEEEE
T ss_pred EEeecCCCceeEEEEEEEEE
Confidence 9999999998765 789998
No 256
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.29 E-value=9.3e-12 Score=106.12 Aligned_cols=97 Identities=20% Similarity=0.392 Sum_probs=78.6
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF 559 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~ 559 (904)
.|..++.++....++.+++.|+|++|.+.++.+.+|.|+|+.... ..|........+.+.+.+|.|++.|.|+|+|+
T Consensus 9 ~P~~P~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~---~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~ 85 (110)
T 2db8_A 9 VPATPILQLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNG---GQFREVYVGKETMCTVDGLHFNSTYNARVKAF 85 (110)
T ss_dssp CCCCCBCCCCCCSCSSSEEEECCBCCTTCCSCCSEEEEEECCSSS---SCCEEEEEESCSCEEEECCCSSSCCEEEEEEE
T ss_pred CCCCccccceeeccCCCEEEEEECCCCCCCCCccEEEEEEEeCCC---CceEEEEeCCcCEEEECCCCCCCEEEEEEEEE
Confidence 444444455555567899999999998777899999999987543 45766665677889999999999999999999
Q ss_pred eCCCCCCCCCcEEEecCCCC
Q psy8771 560 TSVGPGPLSAPVLVKTQQGV 579 (904)
Q Consensus 560 ~~~g~~~~S~~~~~~t~~~~ 579 (904)
|..|.|.+|..+.+.|....
T Consensus 86 n~~G~s~~S~~~~~~T~~~p 105 (110)
T 2db8_A 86 NKTGVSPYSKTLVLQTSEGS 105 (110)
T ss_dssp CSSCBCCCCSCEECCCCCCC
T ss_pred eCCcCCCCCCCEEEEcCCCC
Confidence 99999999999988886543
No 257
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.29 E-value=9.8e-11 Score=112.88 Aligned_cols=161 Identities=12% Similarity=0.117 Sum_probs=106.9
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC---CCceeecceEEEEeee--cCCeEEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP---DDKLPVGRNVLTLDRV--TESENYTCIAA 176 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~---~~~~~~~~~~l~i~~l--~d~g~Y~c~a~ 176 (904)
..+|.|...|. ..+.+|++++|.|.+.|.|. .+.|+|+ +..+.. ..+.....+.|.|.++ +|+|.|+|.|.
T Consensus 3 ~~~P~i~~~p~--~~v~~G~~v~L~C~~~~~~~-~~~W~k~-g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 78 (198)
T 1ugn_A 3 LPKPTLWAEPG--SVITQGSPVTLRCQGGQETQ-EYRLYRE-KKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYG 78 (198)
T ss_dssp CCCCEEEEESC--SEEETTCCEEEEEECCTTCC-CEEEEES-SSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeEeccCC--CcccCCCcEEEEEEecCCCc-EEEEEEC-CccccccccccccCCcccEEEECCCCHHHCeEEEEEEE
Confidence 35788887775 57889999999999999987 6999999 554421 1112235678999999 69999999999
Q ss_pred ecC-c--ceEEEEEEEEEeecCCCCCCCCCCcceEE----EeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe-E-E-
Q psy8771 177 SVL-G--VIETSTIVKVQCKYAPLLTLPVAPLDVKI----SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY-S-E- 246 (904)
Q Consensus 177 n~~-g--~~~~~~~l~v~~~~~~~~~~P~~p~~l~~----~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~-~-~- 246 (904)
|.. | ..+..+.|.|. ..+.+|. +.. .......++|.+...+. .. .+.|...+..... . .
T Consensus 79 n~~~g~~~~s~~~~l~V~-------~~~~~p~-i~~~~~~~v~~G~~v~L~C~~~~~-~~--~v~W~k~g~~~~~~~~~~ 147 (198)
T 1ugn_A 79 SDTAGRSESSDPLELVVT-------GAYIKPT-LSAQPSPVVNSGGNVTLQCDSQVA-FD--GFILCKEGEDEHPQCLNS 147 (198)
T ss_dssp ETTTEECCCCCCEEEEEE-------CSSCCCE-EEEESCSEEETTCCEEEEEECSSC-CS--EEEEEEC------CEEEC
T ss_pred CCCCCcccCCccEEEEEc-------ccccCCc-cccCCccccCCCCcEEEEEecCCC-Cc--EEEEEECCCccCCccccc
Confidence 987 6 34566777777 3222221 111 11234577888877644 22 3445444322110 0 0
Q ss_pred ---eecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771 247 ---ISGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277 (904)
Q Consensus 247 ---~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g 277 (904)
..+.....|.|.++...+.+.|+|.|.|..+
T Consensus 148 ~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 148 QPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp ------CCEEEEEECCCCTTSCEEEEEEEECTTS
T ss_pred cccCCCcceeEEEecccCcccCeEEEEEEEeCCC
Confidence 1122347899999999999999999999876
No 258
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.29 E-value=4.9e-11 Score=114.79 Aligned_cols=160 Identities=11% Similarity=0.091 Sum_probs=103.3
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc---eeecceEEEEeee--cCCeEEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK---LPVGRNVLTLDRV--TESENYTCIAA 176 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~---~~~~~~~l~i~~l--~d~g~Y~c~a~ 176 (904)
..+|.|...|. ..+.+|++++|.|.+.|.|. .+.|+|+ +..+....+ .....+.|.|.++ +|+|.|+|.|.
T Consensus 3 ~~~P~i~~~p~--~~v~~G~~v~L~C~~~~~~~-~~~W~k~-g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 78 (196)
T 2d3v_A 3 LSKATLWAEPG--SVISRGNSVTIRCQGTLEAQ-EYRLVKE-GSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYY 78 (196)
T ss_dssp CCBCEEEEESC--SEEETTCCEEEEEECCTTCC-EEEEEET-TCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCEEEeCCC--CcccCCCeEEEEEeCCCCCc-EEEEEEC-CCCCCcccccccCCccccEEEeccCChhHCeEEEEEEe
Confidence 35788888776 47889999999999999887 8999999 555533211 2235678999999 69999999999
Q ss_pred ecCcce--EEEEEEEEEeecCCCCCCCCCCc-----ceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE---
Q psy8771 177 SVLGVI--ETSTIVKVQCKYAPLLTLPVAPL-----DVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE--- 246 (904)
Q Consensus 177 n~~g~~--~~~~~l~v~~~~~~~~~~P~~p~-----~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~--- 246 (904)
|..|.. +..+.|.|. ..+.+|. ...+. ....++|.+...+.+ . .+.|...+.......
T Consensus 79 n~~g~~~~s~~~~l~V~-------~~~~~p~i~~~~~~~v~--~G~~v~L~C~~~~~p-~--~~~W~k~g~~~~~~~~~~ 146 (196)
T 2d3v_A 79 SPAGWSEPSDPLELVVT-------GFYNKPTLSALPSPVVT--SGENVTLQCGSRLRF-D--RFILTEEGDHKLSWTLDS 146 (196)
T ss_dssp ETTEECBCCCCEEEEEE-------CSSCCCEEEC-------------CEEEEEESSCC-S--EEEEEEC---CCEEEEEC
T ss_pred CCCCcCCcCccEEEEec-------CCCCCCeEEccCCcccc--CCCcEEEEEEcCCCC-C--EEEEEccCCccccccccc
Confidence 987753 345677776 2211221 11122 234566777665444 2 344544432221111
Q ss_pred -e--ecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771 247 -I--SGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277 (904)
Q Consensus 247 -~--~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g 277 (904)
. .+.....|.|.++++.+.+.|+|.|.|..+
T Consensus 147 ~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 147 QLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp EECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred ccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 1 123347899999999999999999999764
No 259
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.29 E-value=1.3e-11 Score=105.88 Aligned_cols=86 Identities=17% Similarity=0.216 Sum_probs=70.0
Q ss_pred CeEEcCCCCceEEecCCCeEEEEEEccC---CCCeEEEeeCCccccC--CCCceee----------cceEEEEeee--cC
Q psy8771 105 PQFSIPPPALLEVMLDSPLNLSCVAVGS---PMPFVKWRKGQNIELT--PDDKLPV----------GRNVLTLDRV--TE 167 (904)
Q Consensus 105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~---p~p~i~W~k~~~~~~~--~~~~~~~----------~~~~l~i~~l--~d 167 (904)
|.|+..|.+ +.+.+|++++|.|.+.|. |.|.|.|+|++-..+. ...++.+ ...+|+|.++ +|
T Consensus 8 ~~F~~~P~~-v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 86 (126)
T 2dav_A 8 ILFIEKPQG-GTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNF 86 (126)
T ss_dssp CSCCSCCCC-CEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTS
T ss_pred cEEEEcCCC-eEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCccc
Confidence 557888888 999999999999999886 8999999998311111 1233332 2578999999 69
Q ss_pred CeEEEEEEEecCcceEEEEEEEEE
Q psy8771 168 SENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 168 ~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
+|.|+|.|.|..|..++.+.|.|.
T Consensus 87 aG~Y~Cevsn~~g~~~~~~~L~V~ 110 (126)
T 2dav_A 87 AGNYRCEVTYKDKFDSCSFDLEVH 110 (126)
T ss_dssp CEEEEEEEECSSCEEEECCEEEEE
T ss_pred CEEEEEEEEeCCCcEEEEEEEEEE
Confidence 999999999999999999999999
No 260
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.29 E-value=2.2e-10 Score=116.24 Aligned_cols=218 Identities=13% Similarity=0.068 Sum_probs=135.6
Q ss_pred CCCCcEEEeccCCce-EEEEeCCCC----CCCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcC
Q psy8771 36 APRDVQVRPLSSSTM-VIQWDEPET----PNGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIP 110 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~-~v~W~~~~~----~~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~ 110 (904)
....|.|...+.+.. .+.|.+... .++.+........+.....|...+... ...+.+.+. .+|.+. .
T Consensus 17 ~~v~l~C~~~~~~~~~~~~W~~~g~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~--s~~~~l~v~-----~~~~~~-~ 88 (262)
T 3rjd_A 17 ETVTLHCEVLHLPGSSSTQWFLNGTATQTSTPSYRITSASVNDSGEYRCQRGLSGR--SDPIQLEIH-----RGWLLL-Q 88 (262)
T ss_dssp CCEEEEEECSSCCCTTCEEEEETTEECSCCSSEEEESSCCGGGCEEEEEEESSSCC--CCCEEEEEE-----CSSEEE-E
T ss_pred CeEEEEEECCCCCCCceEEEEECCEEeeccCCeEEEecCCcccCeEEEEEEecCCc--cccEEEEEe-----ccceEe-c
Confidence 344455554444444 899987531 233344444445554444555443221 223344432 233333 3
Q ss_pred CCCceEEecCCCeEEEEEE-ccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771 111 PPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTI 187 (904)
Q Consensus 111 ~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~ 187 (904)
+.. ..+.+|+.+.|.|.+ .|.|.+.+.|+++ +..+. .....+.|.|.++ +|+|.|+|.|.|..+..+....
T Consensus 89 ~~~-~~~~~g~~v~l~C~~~~~~p~~~v~W~~~-g~~~~----~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~ 162 (262)
T 3rjd_A 89 VSS-RVFTEGEPLALRCHAWKDKLVYNVLYYRN-GKAFK----FFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGIS 162 (262)
T ss_dssp ESC-SEEETTSCEEEEEEEGGGCCCEEEEEEET-TEEEE----EEEECCCEEESSCCGGGCEEEEEEEESSSEEEEECEE
T ss_pred CCC-eEEecCCeEEEEEEccCCCCCceEEEEEC-Ccccc----ccCCCCeEEEEECChhhCEEEEEEEeCCCCccccceE
Confidence 334 778899999999999 7889999999999 55442 2234678999998 6999999999999988888888
Q ss_pred EEEEeecCCCCCCCCCCcceEEE----eecCCeEEEEEeCCCc---cceEEEEEEEeCCCCCCeEEeecceeceEEEcCC
Q psy8771 188 VKVQCKYAPLLTLPVAPLDVKIS----EVTATSVRLDWTYPSE---TLLYYVIQYKPKAANTPYSEISGIITTYYTVRNL 260 (904)
Q Consensus 188 l~v~~~~~~~~~~P~~p~~l~~~----~~~~~sv~l~W~~~~~---~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L 260 (904)
|.|. ..+.+|. +... ......+.|.+...+. +...+.+.|...+. ... .......+.|.++
T Consensus 163 l~V~-------~~~~~p~-~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~--~~~--~~~~~~~L~i~~v 230 (262)
T 3rjd_A 163 VTVK-------ELFPAPV-LNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSK--TLR--GRNTSSEYQILTA 230 (262)
T ss_dssp EEEE-------CSSCCCE-EEESSCSSEETTCCEEEEEECCCCCC-----EEEEEEETTE--EEE--EEESCCEEEESSC
T ss_pred EEec-------cCCCCCe-EeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCc--Eec--ccCCCceEEEEEe
Confidence 8888 3222221 1111 1234567777776532 23344555655421 111 1223467999999
Q ss_pred CCCCeEEEEEEEEcCCCCC
Q psy8771 261 SPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 261 ~p~~~Y~~~v~a~n~~g~s 279 (904)
...+.+.|+|.|.|..|..
T Consensus 231 ~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 231 RREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp CGGGCEEEEEEEEETTSSC
T ss_pred chhhCeEEEEEEEcccCce
Confidence 9999999999999999863
No 261
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.29 E-value=3.7e-11 Score=120.21 Aligned_cols=174 Identities=22% Similarity=0.342 Sum_probs=110.9
Q ss_pred CCCCeEEcCCC---CceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC-----ceeecceEEEEeee--cCCeEE
Q psy8771 102 RVPPQFSIPPP---ALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD-----KLPVGRNVLTLDRV--TESENY 171 (904)
Q Consensus 102 ~~~P~~~~~~~---~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~-----~~~~~~~~l~i~~l--~d~g~Y 171 (904)
..+|.|..++. ..+.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+.... .......+|.|.++ +|+|.|
T Consensus 9 ~~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y 87 (241)
T 3grw_A 9 TGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKN-GREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNY 87 (241)
T ss_dssp --CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEET-TEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEE
T ss_pred CCCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEEC-CcccCCCCcccceeeeccceEEEEEeCCcccCEEE
Confidence 45777765532 238999999999999999999999999999 66554332 23345678999999 699999
Q ss_pred EEEEEecCcceEEEEEEEEEeecCCC-CCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEe----CCC-----C
Q psy8771 172 TCIAASVLGVIETSTIVKVQCKYAPL-LTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKP----KAA-----N 241 (904)
Q Consensus 172 ~c~a~n~~g~~~~~~~l~v~~~~~~~-~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~----~~~-----~ 241 (904)
+|.+.|..|.......|.|....... ......+....+. ....++|.+...+.+.. .+.|.. .+. +
T Consensus 88 ~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~--~g~~v~L~C~~~~~p~p--~v~W~~~~~~~g~~~~~~~ 163 (241)
T 3grw_A 88 TCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAV--LGSDVEFHCKVYSDAQP--HIQWLKHVEVNGSKVGPDG 163 (241)
T ss_dssp EEEEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECC--TTCCEEEEEEEECSSCC--EEEEEEECCSSSCSSCTTT
T ss_pred EEEEeecCCceEEEEEEEEeccCCCCceeecCCCccceec--CCCEEEEEEEEecCCCC--EEEEEEcccCCCcccCCCC
Confidence 99999999998888888887211000 0000012222222 23445555554322222 233333 111 1
Q ss_pred CCeEEe-------ecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 242 TPYSEI-------SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 242 ~~~~~~-------~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
...... .......+.|.++...+.+.|+|.|.|..|...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~ 209 (241)
T 3grw_A 164 TPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIGVAE 209 (241)
T ss_dssp CCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSCEEE
T ss_pred ceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcceEE
Confidence 111100 112346799999999999999999999988753
No 262
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.29 E-value=1.4e-11 Score=119.26 Aligned_cols=167 Identities=12% Similarity=0.055 Sum_probs=101.8
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCCCceee--cc--e--EEEEeee--cCCeEEEEE
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPV--GR--N--VLTLDRV--TESENYTCI 174 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~--~~--~--~l~i~~l--~d~g~Y~c~ 174 (904)
+|.|..+. + +.+.+|+.+.|.|.+. +.|.|.|+|+|| +..+..+.++.+ +. + +|.|.++ +|+|.|+|.
T Consensus 3 ~p~~~~~~-~-~~v~eg~~v~l~c~~~~~~P~p~i~W~kn-g~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~ 79 (207)
T 3rbs_A 3 DPFTKSEL-A-VEILEKGQVRFWMQAEKLSGNAKVNYIFN-EKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQ 79 (207)
T ss_dssp ---CCEEE-E-EEECGGGCEEEEEECSCCCSCCEEEEEET-TEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEE
T ss_pred CCeeecCC-c-eEEEeCCeEEEEEEEecCCCCCEEEEEEC-CEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEE
Confidence 35555544 4 8899999999999997 489999999999 777766655543 22 2 6999998 799999999
Q ss_pred EEecCcceEEEEEEEEEeec-CC-----CCC-----CCCCCc---ceEEEeecCCeEEEEEeCCCc-cceEEEEEEEeCC
Q psy8771 175 AASVLGVIETSTIVKVQCKY-AP-----LLT-----LPVAPL---DVKISEVTATSVRLDWTYPSE-TLLYYVIQYKPKA 239 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~~~~-~~-----~~~-----~P~~p~---~l~~~~~~~~sv~l~W~~~~~-~~~~y~v~~~~~~ 239 (904)
|.| |.......+.+.... .. ... ...+|. .+.........+.|.+...+. +... |.|...+
T Consensus 80 a~N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~v~~g~~v~l~C~v~g~~P~p~--i~W~k~g 155 (207)
T 3rbs_A 80 LQD--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKETH--IVWYKDE 155 (207)
T ss_dssp EEE--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEEEEEEETTTEEEEEEEEESCCTTCE--EEEEETT
T ss_pred EEC--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecCCcEEcCCCcEEEEEEEeCCCCCCE--EEEEECC
Confidence 999 655554444321000 00 000 001221 111222334566666664433 2322 3343321
Q ss_pred C----CCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 240 A----NTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 240 ~----~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
. ...+ ........|.|.++.+.+.+.|+|.|.|..|..
T Consensus 156 ~~l~~~~~~--~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~ 197 (207)
T 3rbs_A 156 REISVDEKH--DFKDGICTLLITEFSKKDAGIYEVILKDDRGKD 197 (207)
T ss_dssp EEECCCCCC--CCSSEEEEEEETTCCGGGCEEEEEEEEETTEEE
T ss_pred EECCCCCce--EcCCCEEEEEECCCCcccCEEEEEEEEcCCCEE
Confidence 1 1111 112334579999999999999999999999864
No 263
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.28 E-value=3.2e-11 Score=124.70 Aligned_cols=224 Identities=15% Similarity=0.189 Sum_probs=134.0
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCCC---------CceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCe
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETPN---------GQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQ 106 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~~---------g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~ 106 (904)
....|.|...+. |.|..+.... +.+........+.....|...+........+.+.+. .+|.
T Consensus 20 ~~v~L~C~~~~~----v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~-----~~~~ 90 (292)
T 4dkd_C 20 ATVTLRCVGNGS----VEWDGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVK-----DPAR 90 (292)
T ss_dssp CCEEEEEECSSC----CCBCCCCCSSCEECCBTTEEEEEESSCCGGGCSCEEECCCC----CCEEECCEEC-----CSSC
T ss_pred CcEEEEEcCCCc----eEEccCCCCceEEeccCceEEEEEcccccccCEEEEEEEccCCCCcceEEEEEEc-----Cccc
Confidence 444455544332 8998654331 134444445555555555555444444445555554 2333
Q ss_pred -EEcCCCCceEEecCCCeEEEEEEccCCC--CeEEEeeCCccccCCCCceee-cceEEEEeee--cCCeEEEEEEEecCc
Q psy8771 107 -FSIPPPALLEVMLDSPLNLSCVAVGSPM--PFVKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAASVLG 180 (904)
Q Consensus 107 -~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g 180 (904)
+...+.. +.+.+|+.+.|.|.+.| |. +.|.|+++++..+....++.. .++.|.|.++ +|+|.|+|.|.|..|
T Consensus 91 ~~~~~~~~-~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 168 (292)
T 4dkd_C 91 PWNVLAQE-VVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGR 168 (292)
T ss_dssp CEEESCSE-EEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTS
T ss_pred cccccCCe-EEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCC
Confidence 3445555 89999999999999998 55 789999985666666656554 4556999998 799999999999887
Q ss_pred ceE-EEEEEEEEeecCCCCCCCC-CCcceEEEe-----ecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe---EEeec-
Q psy8771 181 VIE-TSTIVKVQCKYAPLLTLPV-APLDVKISE-----VTATSVRLDWTYPSETLLYYVIQYKPKAANTPY---SEISG- 249 (904)
Q Consensus 181 ~~~-~~~~l~v~~~~~~~~~~P~-~p~~l~~~~-----~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~---~~~~~- 249 (904)
... ....|.|. ..+. +|. +.... .....+.|.+...+.+ ..+.+.|...+..... .....
T Consensus 169 ~~~s~~~~l~V~-------~~~~~~p~-i~~~~~~~~~~~g~~v~l~C~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~ 239 (292)
T 4dkd_C 169 KVMSISIRLKVQ-------KVIPGPPA-LTLVPAELVRIRGEAAQIVCSASSVD-VNFDVFLQHNNTKLAIPQQSDFHNN 239 (292)
T ss_dssp CEECCCEEEEEE-------CCCCSSCE-EEEESSCBCCCSSSCEEEEEEEEESS-SCCEEECCBSSCCCCCCBEEEEETT
T ss_pred ceeEEEEEEEEe-------CCCCCCCe-EEccCCceeEecCCCEEEEEEecCCC-CceEEEEeCCCcccccCccceeccc
Confidence 654 47778887 2211 221 11110 1234455555543222 1233445443221111 11111
Q ss_pred --ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 250 --IITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 250 --~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
.....+.|.++...+.+.|+|.|.|..|..
T Consensus 240 ~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~ 271 (292)
T 4dkd_C 240 RYQKVLTLNLDQVDFQHAGNYSCVASNVQGKH 271 (292)
T ss_dssp EEEEEEEEEESSCCTTSCEEEEEEEECSSCEE
T ss_pred eeeeEEEEEECccChhcCeEEEEEEecCCCCc
Confidence 123579999999999999999999998864
No 264
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.28 E-value=2.7e-11 Score=102.47 Aligned_cols=96 Identities=19% Similarity=0.275 Sum_probs=77.5
Q ss_pred EecCCCCCCCCCCcEEEecCCCEEEEEe--cCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCce
Q psy8771 710 RTKQYVPGAPPQNVSCEPLSSTSIRISW--EPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTE 787 (904)
Q Consensus 710 ~t~~~~p~~~P~~l~~~~~~~~~v~l~W--~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~ 787 (904)
.|.+.+|. +|.+|++...+.++|.|+| .+| ...||. .+|.|+|+.... ...... ....++|.+|+|++.
T Consensus 4 ~T~~~~P~-~p~~l~~~~~~~~sv~l~W~~~~P--~~~ng~-~~Y~v~y~~~~~---~~~~~~--~~~~~~i~~L~p~t~ 74 (107)
T 1x5a_A 4 GSSGAESL-SGLSLKLVKKEPRQLELTWAGSRP--RNPGGN-LSYELHVLNQDE---EWHQMV--LEPRVLLTKLQPDTT 74 (107)
T ss_dssp TTTTCCCC-CSCCCCEEEEETTEEEEECCCCCS--SCCSSC-CEEEEEEECSSC---EEEEEE--SSSEEEEESCCSSCE
T ss_pred cCCCCCCC-CCCceEEEecCCCEEEEEECCCCC--CCCCCc-eEEEEEEEeCCC---CceEEE--ecceEEECCCCCCCE
Confidence 46667777 4789999999999999999 877 467888 999999987611 112222 223399999999999
Q ss_pred EEEEEEEeeCCCCCCCCCcEEeecCCC
Q psy8771 788 YRIWVLAGTSIGDGPSSYPITIRTHED 814 (904)
Q Consensus 788 Y~~~V~a~~~~g~g~~s~~~~~~t~~~ 814 (904)
|.|+|+|.|..|.|++|..+.++|.+.
T Consensus 75 Y~f~V~A~~~~G~g~~S~~~~~~T~~~ 101 (107)
T 1x5a_A 75 YIVRVRTLTPLGPGPFSPDHEFRTSPP 101 (107)
T ss_dssp EEEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEEEEEEECCCccCCCCCCEEEEECCC
Confidence 999999999999999999999999764
No 265
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=99.28 E-value=3.4e-11 Score=101.77 Aligned_cols=95 Identities=22% Similarity=0.387 Sum_probs=72.0
Q ss_pred CCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCc-eeeEE
Q psy8771 577 QGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGEN-IISYE 655 (904)
Q Consensus 577 ~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~-~~~y~ 655 (904)
.+.|.+|.++.+...+.+ +.|+|.+|.. .++. +.+|.
T Consensus 4 ~~~P~~P~~~~~~~~~~~-v~l~W~~P~~-----------------------------------------~~G~pi~~Y~ 41 (105)
T 2haz_A 4 MDTPSSPSIDQVEPYSST-AQVQFDEPEA-----------------------------------------TGGVPILKYK 41 (105)
T ss_dssp CCCCCCCEEEEEEECSSC-EEEEEECCSC-----------------------------------------CTTSCCCEEE
T ss_pred CCCCcCCCCCEEEEcCCc-EEEEEcCCcc-----------------------------------------cCCccccEEE
Confidence 345666777777776666 7777777754 4555 88899
Q ss_pred EEEEeCCccccceE--E---ecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecC
Q psy8771 656 LYWNDTYAKAKHHR--R---IGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQ 713 (904)
Q Consensus 656 v~~~~~~~~~~~~~--~---~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~ 713 (904)
|+|+..+...+... . ....+.++|.+|+|++.|.|+|+|+|..|.|.+|....++|.+
T Consensus 42 v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n~~G~g~~S~~~~~~T~p 104 (105)
T 2haz_A 42 AEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 104 (105)
T ss_dssp EEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCC
T ss_pred EEEEECCCCCCccceEEccccCCccEEEECCCCCCCEEEEEEEEEcCCccCCCcCCEeeEEec
Confidence 99888765534211 1 1245789999999999999999999999999999999998863
No 266
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=99.28 E-value=1.8e-10 Score=103.78 Aligned_cols=120 Identities=20% Similarity=0.292 Sum_probs=93.5
Q ss_pred ccceEEEeCCCCCcEEEEEEEEEcCC-CCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEE
Q psy8771 673 LVETYSLTGLYPNTLYYIWLAAQSPR-GEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVY 751 (904)
Q Consensus 673 ~~~~~~l~~L~p~t~Y~v~V~a~~~~-G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~ 751 (904)
..+++.+.+++ |+.|.|.++...-. +.+. -....| .||.+|++..++.+++.|+|++|. ..+| +.+
T Consensus 116 ~vts~~vgdg~-g~~~~~~~~~k~v~i~~~t--------q~ev~p-~Pp~NL~At~VT~tSVtLsW~aP~--~~~G-I~g 182 (238)
T 2w1n_A 116 SVTNSSVGDGE-GLVHEIAGTEKTVNIIEGT--------SPEIVV-NPVRDFKASEINKKNVTVTWTEPE--TTEG-LEG 182 (238)
T ss_dssp EEEEEEEECTT-SCEEECBCEEEEEEEECCC--------CCCCCC-CCCEEEEEEEECSSCEEEEEECCS--CCTT-EEE
T ss_pred ceeeEEEecCC-CcEEEeeccceeeeeccCC--------CCcCcc-CCCCceEEEEccCCeEEEEecCCC--CCCC-cee
Confidence 45788999999 99999988632210 1110 122234 589999999999999999999995 4556 999
Q ss_pred EEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecC
Q psy8771 752 YKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTH 812 (904)
Q Consensus 752 Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~ 812 (904)
|+|++.. .....+. +.++|++.+|+++|.|.|+|.|.+..|.+...+.+.++|.
T Consensus 183 Y~ly~~g-------~~v~~v~~~~tsyt~~gLk~~TeYsF~V~A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 183 YILYKDG-------KKVAEIGKDETSYTFKKLNRHTIYNFKIAAKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEEEETT-------EEEEEEETTCCEEEECSCCTTCEEEEEEEEEETTSCBCCCEEEEEECC
T ss_pred EEEEeCC-------ceeEEeeccceEEEecCCCCCCEEEEEEEEEeCCCCccccCcEEEEec
Confidence 9999853 2334455 7789999999999999999999999999887888888884
No 267
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.28 E-value=1.6e-11 Score=102.95 Aligned_cols=88 Identities=22% Similarity=0.389 Sum_probs=74.0
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC-Cceee--cc--eEEEEeee--cCCeEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD-DKLPV--GR--NVLTLDRV--TESENYTCI 174 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~~~~--~~--~~l~i~~l--~d~g~Y~c~ 174 (904)
..||.|...|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+... .++.. +. ..|.|.++ +|+|.|+|.
T Consensus 3 ~~~P~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~k~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 80 (99)
T 1u2h_A 3 KAPPTFKVSLMD-QSVREGQDVIMSIRVQGEPKPVVSWLRN-RQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCK 80 (99)
T ss_dssp CEEEEEEECCCC-EEEETTCCEEEEEEEEEESCCEEEEEET-TEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCEEEEcCCc-eEecCCCEEEEEEEEEEcCCCEEEEEEC-CEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEE
Confidence 357889888888 8999999999999999999999999999 6666544 33332 22 27999998 699999999
Q ss_pred EEecCcceEEEEEEEEE
Q psy8771 175 AASVLGVIETSTIVKVQ 191 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~ 191 (904)
|.|..|.....+.|.|.
T Consensus 81 a~N~~g~~~~~~~l~V~ 97 (99)
T 1u2h_A 81 AVNEYGARQCEARLEVR 97 (99)
T ss_dssp EEETTEEEEEEEEEEEE
T ss_pred EEECCCceeEEEEEEEE
Confidence 99999999999888886
No 268
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.28 E-value=2.1e-11 Score=104.30 Aligned_cols=84 Identities=19% Similarity=0.268 Sum_probs=67.6
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-----------cceEEEEeee--cCC
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----------GRNVLTLDRV--TES 168 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-----------~~~~l~i~~l--~d~ 168 (904)
..||.| ..... ..+..+.|.|.+.|.|.|.|+|+|+ |..+..+.++.. ..+.|.|.++ +|+
T Consensus 2 ~~pP~I-~l~~~----~~~~~~~l~c~v~G~P~P~I~W~kn-G~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~ 75 (126)
T 1he7_A 2 HMPASV-QLHTA----VEMHHWCIPFSVDGQPAPSLRWLFN-GSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNN 75 (126)
T ss_dssp CCCCCC-CCCCC----CCCCEEEEEEEECCSSCCEEEEEET-TEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGC
T ss_pred CCCCEE-EccCC----ccCccEEEEEEEeeeCCCeEEEEEC-CEECCCCCceeEEEeeccccccccceEEEECcCCCCCC
Confidence 357776 32222 3678899999999999999999999 888877655421 1368999998 799
Q ss_pred eEEEEEEEecCcceEEEEEEEEE
Q psy8771 169 ENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 169 g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
|.|+|.|.|..|...+++.|.|.
T Consensus 76 G~YtC~A~N~~G~~~~t~~l~v~ 98 (126)
T 1he7_A 76 GNYTLLAANPFGQASASIMAAFM 98 (126)
T ss_dssp EEEEEEEEETTEEEEEEEEECCC
T ss_pred EEEEEEEEECCCeEEEEEEEEEE
Confidence 99999999999999998888877
No 269
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.28 E-value=1.8e-11 Score=106.76 Aligned_cols=108 Identities=21% Similarity=0.220 Sum_probs=87.9
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCC-CC------c--eeeEEEEEEeCCcccc-ceEEecccceEEEeCCCCCcEEE
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHS-GE------N--IISYELYWNDTYAKAK-HHRRIGLVETYSLTGLYPNTLYY 689 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~-~~------~--~~~y~v~~~~~~~~~~-~~~~~~~~~~~~l~~L~p~t~Y~ 689 (904)
.++...++.+.+++.++++|+|.++... ++ . +..|.|.|...+.... ..+..+..++++|.+|+|++.|.
T Consensus 17 ~~s~v~~p~v~~i~s~S~~LsW~~P~~~~~g~~~~~g~~~i~~Yev~~~~k~~~~~~~~~~~g~~ts~~v~~L~P~T~Y~ 96 (137)
T 1wk0_A 17 LLSNIVKPVASDIQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYVGEETNITLNDLKPAMDYH 96 (137)
T ss_dssp HTTCCCCCEEESCCSSCEEEECCCCCCCSTTSSCSSCSCSCCEEEEEECSSCTTSCCEEEEEESCSEEEECSCCTTCEEC
T ss_pred ccCCCCCcEEEEEccCEEEEEECCCCCccCccccccccCccEEEEEEEEecCCCCceEEEEecCccEEEEcCCCCCCEEE
Confidence 3566788899999999999999998654 32 2 5899999977654333 34445777899999999999999
Q ss_pred EEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEec
Q psy8771 690 IWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPL 728 (904)
Q Consensus 690 v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~ 728 (904)
|+|+|+|..|.|.+|..+.|+|....|. +|..+++...
T Consensus 97 ~rV~A~n~~G~G~~S~~~~f~T~~~~P~-~P~~p~l~~~ 134 (137)
T 1wk0_A 97 AKVQAEYNSIKGTPSEAEIFTTLSCEPD-IPNPPRISGP 134 (137)
T ss_dssp EEEEEEETTEECCCCCCCCEECCCSSSC-CCSCSCCCSC
T ss_pred EEEEEEeCCCcCCCCCCEEEECCCCCCC-CCCCCEEeCC
Confidence 9999999999999999999999999887 4677766543
No 270
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.28 E-value=2.2e-11 Score=105.79 Aligned_cols=101 Identities=23% Similarity=0.332 Sum_probs=82.9
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-cCceEEEEcCCCCCCeEEEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-DNNQLTTISDLTPHTIYTIRVQA 558 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~a 558 (904)
.+|.+|.++.+...+.+++.|+|.++.+.++.+.+|.|+|+.... ...|..... ...+.+.+.+|.|++.|.|+|+|
T Consensus 14 ~~P~~P~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~--~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A 91 (117)
T 1uem_A 14 DLPGPPSKPQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSV--SNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRA 91 (117)
T ss_dssp CSCBCCCCCEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTT--EEEEEEEEEEECSSEEEECSCCTTCEEEEEEEE
T ss_pred CCccCCCCCEEEEecCCEEEEEEeCCCCCCcCceEEEEEEEECCC--CCceeEcccccCcCEEEECCCCCCCEEEEEEEE
Confidence 455789999999999999999999988666789999999988642 245655433 46778999999999999999999
Q ss_pred EeCCCCCCCCCcEE-EecCCCCCCC
Q psy8771 559 FTSVGPGPLSAPVL-VKTQQGVPSQ 582 (904)
Q Consensus 559 ~~~~g~~~~S~~~~-~~t~~~~p~~ 582 (904)
+|..|.|.+|.... ++|....|.+
T Consensus 92 ~n~~G~s~~S~~~~~v~t~~~~P~~ 116 (117)
T 1uem_A 92 INPQGLSDPSPMSDPVRTQDSGPSS 116 (117)
T ss_dssp EETTEEEEECCCCCCEECCCSSCCC
T ss_pred ECCCccCCCcCCCccEEccCCCCCC
Confidence 99999988888776 7777666554
No 271
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.27 E-value=1.6e-10 Score=119.29 Aligned_cols=238 Identities=13% Similarity=0.069 Sum_probs=139.4
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecC
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVL 179 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~ 179 (904)
..||.|...+.+ +.+.+|++++|.|.+.| .|.|+|+ +..+ ......++.|.|.++ +|+|.|+|.|.|
T Consensus 10 ~~~P~i~~~~~~-~~v~~G~~v~l~C~~~~----~i~W~~~-~~~~---~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n-- 78 (290)
T 2o26_X 10 PSPPSIHPAQSE-LIVEAGDTLSLTCIDPD----FVRWTFK-TYFN---EMVENKKNEWIQEKAEATRTGTYTCSNSN-- 78 (290)
T ss_dssp --CCEESSCSSE-EEEETTSCEEEEEECTT----EEEEEEE-CSSS---CEEEECSSEEEETTCCGGGCEEEEEEESS--
T ss_pred CCCCEEeCCCCe-EEEcCCCcEEEEECCCC----cEEEecC-Ccce---eeecCCCceEEEeccCHHhCeEEEEEeeC--
Confidence 567888877777 99999999999999999 8999999 5544 112234589999999 699999999999
Q ss_pred cceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEE-EeCCCCC-CeEEeecceeceEEE
Q psy8771 180 GVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQY-KPKAANT-PYSEISGIITTYYTV 257 (904)
Q Consensus 180 g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~-~~~~~~~-~~~~~~~~~~~~~~i 257 (904)
|. ...+.|.|... +... ..+.++.+. ....+.|.+...+ +. .-.+.| ...+... .-..........+.|
T Consensus 79 g~-~~~~~l~V~~~--~~~~--~~~~~~~~~--~g~~v~l~C~~~~-p~-~~~v~W~~~~g~~l~~~~~~~~~~~~~L~i 149 (290)
T 2o26_X 79 GL-TSSIYVFVRDP--AKLF--LVGLPLFGK--EDSDALVRCPLTD-PQ-VSQYSLIECDGKSLPTDLTFVPNPKAGITI 149 (290)
T ss_dssp SC-EEEEEEEEECS--SCCB--CCCCCEEEE--TTSCEEECCCBSC-CS-CEEEEEEETTSCCCCTTCEEEEETTTEEEE
T ss_pred Cc-cEEEEEEEeCC--Cccc--ccccceEEe--cCCeEEEeCcCCC-CC-CceEEEEeCCCcCCCCCCceeeCCCCCEEE
Confidence 54 67777887721 1111 223344443 3445777776553 22 123445 3222111 001111112257999
Q ss_pred cCCCCCCeE-EEEEEEEcCCCCCCCCCCeEEecC--CCCCC---CCCCceEecccCCCeeEEEecCCCCCCce-eeEEEE
Q psy8771 258 RNLSPYTEY-EFYIIAVNNLGRGPPSSPAVITTG--ETEPG---TAPRDVQVRPLSSSTMVIQWDEPETPNGQ-ITAKHH 330 (904)
Q Consensus 258 ~~L~p~~~Y-~~~v~a~n~~g~s~~s~~~~~~t~--~~~p~---~~p~~l~~~~~~~~~v~l~W~~p~~~~~~-~~~~~~ 330 (904)
.++...+.+ .|+|.|.|..|... +....+... ...++ ..|... .......+.|.+.....+... +.++..
T Consensus 150 ~~v~~~d~G~~Y~C~a~n~~~~~~-s~~~~l~V~~~~~~~P~i~~~~~~~--~v~~G~~v~l~C~~~g~p~p~~i~W~~~ 226 (290)
T 2o26_X 150 KNVKRAYHRLCVRCAAQRDGTWLH-SDKFTLKVREAIKAIPVVSVPETSH--LLKKGDTFTVVCTIKDVSTSVNSMWLKM 226 (290)
T ss_dssp ESCCGGGTTCEEEEEEEETTEEEE-CCCEEEEEECCCCSCCEEECSCSBC--CCCTTCCEEEEEEEEESSTTCEEEEEEE
T ss_pred ecccHHHCCCEEEEEEEECCceEE-eEEEEEEEEeCCCCCCccccCCCcc--eEecCCcEEEEEEEecCCcceeEEEecC
Confidence 999999999 99999999855422 322332221 11111 111111 112234455555443222222 333321
Q ss_pred E-------------------eeceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771 331 R-------------------RIGLVETYSLTGLYPNTLYYIWLAAQSPRGE 362 (904)
Q Consensus 331 ~-------------------~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~ 362 (904)
. .......+.|..+.....-.+.+.|.|..|.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~ 277 (290)
T 2o26_X 227 NPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGS 277 (290)
T ss_dssp SSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCE
T ss_pred CCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCc
Confidence 1 1122346788888888888888999988774
No 272
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.27 E-value=5.1e-11 Score=113.16 Aligned_cols=162 Identities=19% Similarity=0.247 Sum_probs=104.8
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--c----ceEEEEeee--cCCeEEEEEE
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--G----RNVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~----~~~l~i~~l--~d~g~Y~c~a 175 (904)
+|.|...|.+ +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+....+... . .+.|.|.++ +|+|.|+|.+
T Consensus 2 ~~~~~~~p~~-~~v~~G~~v~l~C~~~~~p~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 79 (182)
T 1rhf_A 2 GLKLMGAPVK-LTVSQGQPVKLNCSVEGMEEPDIQWVKD-GAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQV 79 (182)
T ss_dssp -----CCCEE-EEEETTCCEEEEEEEESCSSCCEEEEET-TEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEE
T ss_pred CCEEEeCCcc-eEEeCCCcEEEEEEEeCCCCCeEEEEEC-CeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEE
Confidence 4677778877 9999999999999999999999999999 766666544433 2 368999999 6999999999
Q ss_pred EecCcc-eEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceece
Q psy8771 176 ASVLGV-IETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTY 254 (904)
Q Consensus 176 ~n~~g~-~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~ 254 (904)
.|..|. .+..+.|.|.. .|... ..|....+.. ...+.|.+...+.+.. ..+.|...+..... .......
T Consensus 80 ~~~~~~~~~~~~~l~V~~--~p~~~--~~~~~~~~~~--g~~~~l~C~~~g~p~p-~~v~W~~~~~~~~~---~~~~~~~ 149 (182)
T 1rhf_A 80 EDGGETEISQPVWLTVEG--VPFFT--VEPKDLAVPP--NAPFQLSCEAVGPPEP-VTIVWWRGTTKIGG---PAPSPSV 149 (182)
T ss_dssp SSCTTCEECCCEEEEEEC--SCEEE--ECCCCEEECT--TCCEEEEEEEECSSSC-CEEEEEETTEECSC---SEESSEE
T ss_pred EcCCCcEEEEEEEEEEec--CCeEE--ecCcceEecC--CCEEEEEeEecCCCCC-CEEEEEcCCeECCC---CCCCceE
Confidence 998775 44677788871 11111 1233333332 3455555554432222 13444443211110 0013467
Q ss_pred EEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 255 YTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 255 ~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
+.|.+++ +.+.|+|.|.|..|..
T Consensus 150 L~i~~~~--d~G~Y~C~a~N~~g~~ 172 (182)
T 1rhf_A 150 LNVTGVT--QSTMFSCEAHNLKGLA 172 (182)
T ss_dssp EEECCCS--SCEEEEEEEEETTEEE
T ss_pred EEEeccc--cCeEEEEEEECCCCCc
Confidence 8898884 6799999999998864
No 273
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.27 E-value=4.1e-11 Score=104.75 Aligned_cols=110 Identities=22% Similarity=0.412 Sum_probs=85.8
Q ss_pred CCCCCCCCceeeecCCCCCCCCCCe--EEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE---eecCc
Q psy8771 464 GEGATTPPIPVRTKQYEPGTAPRDV--QVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ---VVDNN 538 (904)
Q Consensus 464 g~~~~s~~~~~~t~~~~p~~~p~~l--~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~~~~~ 538 (904)
|.+..+..+.+. .+|.+|.++ .+...+.+++.|+|.+|.+.++.+.+|.|+|+..+ ..|... .....
T Consensus 4 G~~~~s~~l~v~----~~P~~P~~~~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~----~~~~~~~~~~~~~~ 75 (121)
T 1wf5_A 4 GSSGRSAHLRVR----QLPHAPEHPVATLSTVERRAINLTWTKPFDGNSPLIRYILEMSENN----APWTVLLASVDPKA 75 (121)
T ss_dssp CCCCCCCCSSCC----CCCCCCSSCEEEECSSSTTEEEEECCCCCCCSSCEEEEEEEEECTT----CCCEEEESSCCTTC
T ss_pred CcccceEEEEEe----eCCccCCCcceeeEeccCCEEEEEEcCCCCCCCcceEEEEEEEcCC----CCceEeEcccCCCc
Confidence 444444444444 345788999 88888999999999998766678999999999875 456544 22567
Q ss_pred eEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcE-EEecCCCCCC
Q psy8771 539 QLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPV-LVKTQQGVPS 581 (904)
Q Consensus 539 ~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~-~~~t~~~~p~ 581 (904)
+.+.+.+|.|++.|.|+|+|.|..|.|.+|... .+.|....|.
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~~P~ 119 (121)
T 1wf5_A 76 TSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPESGPS 119 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCCSSC
T ss_pred cEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCCCCC
Confidence 789999999999999999999999999888876 5777666554
No 274
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.27 E-value=2.7e-11 Score=103.83 Aligned_cols=92 Identities=28% Similarity=0.314 Sum_probs=75.6
Q ss_pred cEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccC--CCCccEEEEec--CcceEEecCCCCCceEEEEEEEeeCC
Q psy8771 723 VSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGR--SDSEASIVTLK--NQTSFVLDELKKWTEYRIWVLAGTSI 798 (904)
Q Consensus 723 l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~--~~~~~~~~~~~--~~~~~~i~~L~p~t~Y~~~V~a~~~~ 798 (904)
+.+...++++|.|+|+.+ ..+|.+.+|.|+|+..+. .........+. ..+++.|.+|+|++.|.|+|+|+|..
T Consensus 22 ~~~~a~sstsi~vsW~~~---~~~g~i~gY~V~Y~~~~~~~~~~~~~~~~v~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~ 98 (120)
T 1ujt_A 22 HNPVVLTPTTVQVTWTVD---RQPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNE 98 (120)
T ss_dssp CCCCCCBTTEEEEEEEES---SCCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSS
T ss_pred eccEEccCceEEEEEccC---CCCCcEeeEEEEEEECCCCCCCCccEEEEecCCCcCEEEECCCCCCCEEEEEEEEECCC
Confidence 344566889999999964 468999999999999765 11222333333 67899999999999999999999999
Q ss_pred CCCCCCCcEEeecCCCC-CC
Q psy8771 799 GDGPSSYPITIRTHEDD-PS 817 (904)
Q Consensus 799 g~g~~s~~~~~~t~~~~-P~ 817 (904)
|.|++|.++.++|.+++ |+
T Consensus 99 G~Gp~S~~v~~~T~e~v~Ps 118 (120)
T 1ujt_A 99 FQGMDSESKTVRTTEESGPS 118 (120)
T ss_dssp CCCCCCCCEEEEECSSCCCC
T ss_pred ccCCCCCCEEEECCCCCCCC
Confidence 99999999999999998 86
No 275
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=1.8e-11 Score=102.13 Aligned_cols=84 Identities=19% Similarity=0.245 Sum_probs=72.5
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a 175 (904)
..||.|...+.+ +.+.+|+.+.|.|.+ .|.|.|.|+|+ |..+..+.++.+. ...|.|.++ +|+|.|+|.|
T Consensus 5 ~~p~~~~~~~~~-~~v~~G~~v~l~C~v--~p~p~v~W~k~-g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a 80 (100)
T 2yuz_A 5 SSGLKILTPLTD-QTVNLGKEICLKCEI--SENIPGKWTKN-GLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAP 80 (100)
T ss_dssp SCCCCCSBCCCC-EEEETTSCCCEEEEC--SSCCCEEEEET-TEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEE
T ss_pred CCCCEEeccCCc-eEEcCCCCEEEEEEe--CCCCeEEEEEC-CEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEE
Confidence 457889999988 999999999999999 89999999999 8788777776652 247999999 7999999999
Q ss_pred EecCcceEEEEEEEEE
Q psy8771 176 ASVLGVIETSTIVKVQ 191 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~ 191 (904)
.|. ..+.++.|.|.
T Consensus 81 ~N~--~~~~~a~L~V~ 94 (100)
T 2yuz_A 81 DAY--NVTLPAKVHVI 94 (100)
T ss_dssp SSS--CCCEEEEEEEE
T ss_pred cCC--CeeEEEEEEEe
Confidence 997 56778889988
No 276
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.27 E-value=6.8e-11 Score=115.48 Aligned_cols=174 Identities=10% Similarity=0.056 Sum_probs=110.1
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc-e--eecce--EEEEeee--cCCeEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK-L--PVGRN--VLTLDRV--TESENYTCI 174 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~-~--~~~~~--~l~i~~l--~d~g~Y~c~ 174 (904)
..+|.|...|. ..+.+|++++|.|.+.| +.+.+.|+|+ +..+....+ . ..+.+ .|.|.++ +|+|.|+|.
T Consensus 7 ~~~P~i~~~p~--~~v~~G~~vtL~C~~~~-~~~~~~W~k~-g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 82 (218)
T 1uct_A 7 FPMPFISAKSS--PVIPLDGSVKIQCQAIR-EAYLTQLMII-KNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQ 82 (218)
T ss_dssp SCCCCEEESSC--SEEETTCCEEEEECCCT-TCSEEEEEEE-ETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEecCC--CccCCCCCEEEEEEcCC-CCCEEEEEEC-CCcccccccccCCCCcceeeEEEEcccccccCEEEEEE
Confidence 56788888876 57899999999999988 6889999999 555432211 1 12345 8999998 699999999
Q ss_pred EEecCcceE--EEEEEEEEeecCCCCCCCCCCc-----ceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEe
Q psy8771 175 AASVLGVIE--TSTIVKVQCKYAPLLTLPVAPL-----DVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEI 247 (904)
Q Consensus 175 a~n~~g~~~--~~~~l~v~~~~~~~~~~P~~p~-----~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~ 247 (904)
|.|..|... ....|.|. ..+.+|. +..+ .....++|.+.....+... +.|...+........
T Consensus 83 a~n~~~~~~~s~~~~l~V~-------~~~~~P~i~~~p~~~v--~~G~~v~L~C~~~~~~~~~--~~W~k~g~~~~~~~~ 151 (218)
T 1uct_A 83 YRIGHYRFRYSDTLELVVT-------GLYGKPFLSADRGLVL--MPGENISLTCSSAHIPFDR--FSLAKEGELSLPQHQ 151 (218)
T ss_dssp EEETTTEEEECCCEEEEEE-------CSSCCCEEEESSCSEE--CTTCCCEEEEECSSSCCSE--EEEEETTCSSCCSEE
T ss_pred EEcCCCceeecCCEEEEEc-------CcccCCEEEeCCCCcc--CCCCCEEEEEeCCCCCCCE--EEEEECCCccccccc
Confidence 999876433 34566665 2222221 1222 2345677777434333333 344444322211111
Q ss_pred ecceeceEEEcCCCCCCeEEEEEEEEcCCC---CCCCCCCeEEecC
Q psy8771 248 SGIITTYYTVRNLSPYTEYEFYIIAVNNLG---RGPPSSPAVITTG 290 (904)
Q Consensus 248 ~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g---~s~~s~~~~~~t~ 290 (904)
.......|.|.+++..+.+.|+|.|.|... .+..|..+.+...
T Consensus 152 ~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (218)
T 1uct_A 152 SGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVT 197 (218)
T ss_dssp ECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC
T ss_pred CCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEe
Confidence 223457899999999999999999998642 2345555555443
No 277
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.27 E-value=2.4e-11 Score=111.25 Aligned_cols=92 Identities=25% Similarity=0.418 Sum_probs=80.8
Q ss_pred CCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec-----ceEEEEeee--cCCeE
Q psy8771 98 DPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG-----RNVLTLDRV--TESEN 170 (904)
Q Consensus 98 ~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~-----~~~l~i~~l--~d~g~ 170 (904)
.+.+..+|.|...+.+ +.+..|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.+. ...|.|.++ +|+|.
T Consensus 35 ~~~v~~~P~~~~~~~~-~~v~~G~~v~L~C~~~g~P~p~v~W~k~-g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 112 (154)
T 1fhg_A 35 EEKPHVKPYFTKTILD-MEVVEGSAARFDCKVEGYPDPEVMWFKD-DNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAK 112 (154)
T ss_dssp CCCCCEEEEEEECCCC-EEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCSSSEEEEECTTCEEEEEESSCCGGGCEE
T ss_pred cccCCCCCeEEccCCc-EEEeCCCeEEEEEEEEEecCCEEEEEEC-CEECCCCCcEEEEECCCCeEEEEECCCChhcCEE
Confidence 3446788999999988 9999999999999999999999999999 7777766666542 358999999 69999
Q ss_pred EEEEEEecCcceEEEEEEEEE
Q psy8771 171 YTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 171 Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
|+|.|.|..|.....+.|.|.
T Consensus 113 Y~C~a~N~~G~~~~~~~l~V~ 133 (154)
T 1fhg_A 113 YTCKAVNSLGEATCTAELLVE 133 (154)
T ss_dssp EEEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEEECCCeEEEEEEEEEe
Confidence 999999999999999999998
No 278
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=6.9e-12 Score=106.08 Aligned_cols=97 Identities=32% Similarity=0.545 Sum_probs=80.9
Q ss_pred ecCCCCCCCCCCeEEEecCCceEEEEecCC--CCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEE
Q psy8771 476 TKQYEPGTAPRDVQVRPLSSSTMVIQWDEP--ETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYT 553 (904)
Q Consensus 476 t~~~~p~~~p~~l~v~~~~~~~~~l~W~~p--~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~ 553 (904)
+.+..|+.+|.++.+...+.+++.|+|++| ...++.+.+|.|+|+..+.. .|.. .....+.+.+.+|.|++.|.
T Consensus 3 t~e~~pp~~P~~l~~~~~~~~si~l~W~~p~~~~~~g~i~~Y~i~~~~~~~~---~~~~-~~~~~~~~~i~~L~p~t~Y~ 78 (103)
T 2edy_A 3 SGSSGPSGFPQNLHVTGLTTSTTELAWDPPVLAERNGRIISYTVVFRDINSQ---QELQ-NITTDTRFTLTGLKPDTTYD 78 (103)
T ss_dssp TTCCCCSCCCEEEECSSBCSSCEECEEECCCTTSCSSCCCEEEEEEEETTSC---CEEE-EEESSSCCEECSCCTTCCEE
T ss_pred CCCCCCCCCCeeeEEEecCCCEEEEEECCCCCcCCCCcEeEEEEEEEECCCC---ccEE-EcCCcceEEEcCCCCCCEEE
Confidence 344577789999999999999999999998 55678999999999987642 2333 34567789999999999999
Q ss_pred EEEEEEeCCCCCCCCCcEEEecC
Q psy8771 554 IRVQAFTSVGPGPLSAPVLVKTQ 576 (904)
Q Consensus 554 ~~V~a~~~~g~~~~S~~~~~~t~ 576 (904)
|+|+|.|..|.|.+|..+.++|.
T Consensus 79 ~~V~A~n~~G~g~~S~~~~~~T~ 101 (103)
T 2edy_A 79 IKVRAWTSKGSGPLSPSIQSRTM 101 (103)
T ss_dssp EECCEECSSCBCCCCCCCCCCCC
T ss_pred EEEEEECCCCCCCCCCCEEEEec
Confidence 99999999999999988877764
No 279
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.26 E-value=5.9e-11 Score=100.38 Aligned_cols=95 Identities=26% Similarity=0.389 Sum_probs=71.8
Q ss_pred cCCCCCCCCCCceEEecCCCeEEEEE--eCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCcee
Q psy8771 575 TQQGVPSQPRDLRAVDIQETAVTLAW--SKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENII 652 (904)
Q Consensus 575 t~~~~p~~p~~~~~~~~~~~~~~l~W--~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~ 652 (904)
|...+|.+|.+|++..++.+++.|+| .+|.. .++. .
T Consensus 5 T~~~~P~~p~~l~~~~~~~~sv~l~W~~~~P~~-----------------------------------------~ng~-~ 42 (107)
T 1x5a_A 5 SSGAESLSGLSLKLVKKEPRQLELTWAGSRPRN-----------------------------------------PGGN-L 42 (107)
T ss_dssp TTTCCCCCSCCCCEEEEETTEEEEECCCCCSSC-----------------------------------------CSSC-C
T ss_pred CCCCCCCCCCceEEEecCCCEEEEEECCCCCCC-----------------------------------------CCCc-e
Confidence 55567777778888887888888888 66654 4556 8
Q ss_pred eEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCC
Q psy8771 653 SYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY 714 (904)
Q Consensus 653 ~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~ 714 (904)
+|.|+|+.... ....... ...++|.+|+|++.|.|+|+|+|..|.|.+|..+.++|...
T Consensus 43 ~Y~v~y~~~~~-~~~~~~~--~~~~~i~~L~p~t~Y~f~V~A~~~~G~g~~S~~~~~~T~~~ 101 (107)
T 1x5a_A 43 SYELHVLNQDE-EWHQMVL--EPRVLLTKLQPDTTYIVRVRTLTPLGPGPFSPDHEFRTSPP 101 (107)
T ss_dssp EEEEEEECSSC-EEEEEES--SSEEEEESCCSSCEEEEEEEEECSSSCCCCCCCEEEECCCC
T ss_pred EEEEEEEeCCC-CceEEEe--cceEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEEECCC
Confidence 88888876511 1111111 22399999999999999999999999999999999999865
No 280
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.26 E-value=1.2e-10 Score=111.39 Aligned_cols=148 Identities=21% Similarity=0.283 Sum_probs=105.8
Q ss_pred CCCCcEEEeccCCc--eEEEEeCCCCC---------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCC
Q psy8771 36 APRDVQVRPLSSST--MVIQWDEPETP---------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVP 104 (904)
Q Consensus 36 ~p~~l~~~~~~~~s--~~v~W~~~~~~---------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~ 104 (904)
....|.|...+.+. +.|.|.+.... ++.+........+.....|...+. ......+.+.+ ..+
T Consensus 19 ~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V-----~~~ 92 (190)
T 2wv3_A 19 LPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEV-----KAA 92 (190)
T ss_dssp SCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEE-----ECC
T ss_pred ceEEEEEEeccCCCCceEEEEEECCEECcccceEeccEEEEEecCCcccCEEEEEEEEeC-CcccccEEEEE-----ecC
Confidence 66677777766666 89999875211 122444444555555555665555 33333444554 457
Q ss_pred CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEee--CCccccC---CCCceeec----ceEEEEeee---cCCeEEE
Q psy8771 105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK--GQNIELT---PDDKLPVG----RNVLTLDRV---TESENYT 172 (904)
Q Consensus 105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k--~~~~~~~---~~~~~~~~----~~~l~i~~l---~d~g~Y~ 172 (904)
|.|...+.. ..+.+|+.+.|.|.+.|.|.|.|.|++ + +..+. ...++.+. .+.|.|.++ +|+|.|+
T Consensus 93 p~~~~~~~~-~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~-g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~ 170 (190)
T 2wv3_A 93 PDITGHKRS-ENKNEGQDAMMYCKSVGYPHPEWMWRKKEN-GVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYE 170 (190)
T ss_dssp CEEEEECSE-EEEETTSCEEEEEEEECSSCCEEEEEEEET-TEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEE
T ss_pred CcccccCCc-ceeeCCCcEEEEEEeCccCCCceEEEEcCC-CceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEE
Confidence 888887777 889999999999999999999999999 5 54442 34455442 247999987 4899999
Q ss_pred EEEEecCcceEEEEEEEEE
Q psy8771 173 CIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 173 c~a~n~~g~~~~~~~l~v~ 191 (904)
|.|.|..|.....+.|.|.
T Consensus 171 C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 171 CNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp EEEECSSCEEEEEEEEEEE
T ss_pred EEEEecCCcceeEEEEEEE
Confidence 9999999999999888876
No 281
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.26 E-value=3.4e-11 Score=102.59 Aligned_cols=87 Identities=21% Similarity=0.321 Sum_probs=70.2
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEccCCC---CeEEEeeCCccccC--CCCceee----------cceEEEEeee--c
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPM---PFVKWRKGQNIELT--PDDKLPV----------GRNVLTLDRV--T 166 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~---p~i~W~k~~~~~~~--~~~~~~~----------~~~~l~i~~l--~ 166 (904)
.|.|+..|.+ +.+.+|++++|.|.+.|.|. |.|.|+|++...+. ...++.+ ...+|.|.++ +
T Consensus 4 ~p~f~~~p~~-~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 4 IGLFVMRPQD-GEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp CCSCSBCCCC-EEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred ccEEEeCCCc-EEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 5778888888 99999999999999999998 99999998422211 1234432 2468999999 6
Q ss_pred CCeEEEEEEEecCcceEEEEEEEEE
Q psy8771 167 ESENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 167 d~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
|+|.|+|.|.|..|..++.+.|.|.
T Consensus 83 D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred cCEEEEEEEecCCCceEEEEEEEEe
Confidence 9999999999999999999999886
No 282
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.26 E-value=1.4e-11 Score=105.10 Aligned_cols=90 Identities=19% Similarity=0.230 Sum_probs=76.4
Q ss_pred ceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCC
Q psy8771 626 DLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTP 705 (904)
Q Consensus 626 ~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~ 705 (904)
++.+..++.++++|+|.++...++.+.+|.|+|+..+...+.....+....++|.+|.|++.|.|+|+|+|..|.|.+|.
T Consensus 16 ~~~~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~ 95 (110)
T 2db8_A 16 QLEECCTHNNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSK 95 (110)
T ss_dssp CCCCCSCSSSEEEECCBCCTTCCSCCSEEEEEECCSSSSCCEEEEEESCSCEEEECCCSSSCCEEEEEEECSSCBCCCCS
T ss_pred cceeeccCCCEEEEEECCCCCCCCCccEEEEEEEeCCCCceEEEEeCCcCEEEECCCCCCCEEEEEEEEEeCCcCCCCCC
Confidence 44455678999999999998877899999999988765555555555678999999999999999999999999999999
Q ss_pred CeeEEecCCC
Q psy8771 706 PIPVRTKQYV 715 (904)
Q Consensus 706 ~~~~~t~~~~ 715 (904)
.+.++|...+
T Consensus 96 ~~~~~T~~~p 105 (110)
T 2db8_A 96 TLVLQTSEGS 105 (110)
T ss_dssp CEECCCCCCC
T ss_pred CEEEEcCCCC
Confidence 9988887653
No 283
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.26 E-value=4.4e-12 Score=134.16 Aligned_cols=245 Identities=16% Similarity=0.124 Sum_probs=78.4
Q ss_pred CCCceEEecCCCeEEEEEEccC-CCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771 111 PPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTI 187 (904)
Q Consensus 111 ~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~ 187 (904)
+.+ +.+.+|+.+.|.|.+.|. |.+.|.|+|+ +..+....++...++.|.|.++ +|+|.|+|.|.|. |.......
T Consensus 15 ~~~-~~v~~G~~v~l~C~~~~~~p~~~v~W~k~-g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~ 91 (334)
T 1ry7_B 15 QEQ-LVFGSGDAVELSCPPPGGGPMGPTVWVKD-GTGLVPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFS 91 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCc-EEEecCCcEEEEeeCCCCCCCcceEEEEC-CeeCCCcccEEeccceEEEeecccccCEEEEEEEEeC-CeEEEEEE
Confidence 556 899999999999999987 6789999999 7777777777778889999998 6999999999998 77777777
Q ss_pred EEEEeec--------------------CCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCC----C
Q psy8771 188 VKVQCKY--------------------APLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANT----P 243 (904)
Q Consensus 188 l~v~~~~--------------------~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~----~ 243 (904)
|.|.... +|.+..|.....-.........+.|.+...+.+.. .+.|...+... .
T Consensus 92 l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~--~v~W~~~~~~~~~~~~ 169 (334)
T 1ry7_B 92 VRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTP--SISWLKNGREFRGEHR 169 (334)
T ss_dssp ---------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCC--EEECCBTTBCCCTTSS
T ss_pred EEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCC--eEEEEECCEECccccc
Confidence 7776221 11111111111111222334567777776533332 34554432111 0
Q ss_pred e-EEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCC----CCCCceEecccCCCeeEEEecCC
Q psy8771 244 Y-SEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPG----TAPRDVQVRPLSSSTMVIQWDEP 318 (904)
Q Consensus 244 ~-~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~----~~p~~l~~~~~~~~~v~l~W~~p 318 (904)
. ..........+.|.++...+.+.|+|.|.|..|.......+.+......++ ..|....+.. ...+.|.+...
T Consensus 170 ~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~--G~~v~l~C~~~ 247 (334)
T 1ry7_B 170 IGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVL--GSDVEFHCKVY 247 (334)
T ss_dssp TTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEES--SCCEEECCCCB
T ss_pred ccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeC--CCCEEEEEEEe
Confidence 0 001112346799999999999999999999887643222233322111110 1122222221 23344554443
Q ss_pred CCCCceeeEEEEE------------------e-------eceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771 319 ETPNGQITAKHHR------------------R-------IGLVETYSLTGLYPNTLYYIWLAAQSPRGE 362 (904)
Q Consensus 319 ~~~~~~~~~~~~~------------------~-------~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~ 362 (904)
..+...+.++... . ......+.|..+.......+++.|.|..|.
T Consensus 248 g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~ 316 (334)
T 1ry7_B 248 SDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIGF 316 (334)
T ss_dssp CSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSCC
T ss_pred cCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCCe
Confidence 3333333333210 0 000125788888887777888888888775
No 284
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.26 E-value=6.8e-12 Score=106.36 Aligned_cols=89 Identities=19% Similarity=0.404 Sum_probs=78.2
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEE
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~ 174 (904)
...+|.|...|.+ +.+.+|+++.|.|.+.|.|.|.|.|+|+ +..+....++.+. .+.|.|.++ +|+|.|+|.
T Consensus 11 ~~~~~~i~~~p~~-~~v~~G~~v~L~C~~~g~p~p~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (106)
T 1nct_A 11 TTLAARILTKPRS-MTVYEGESARFSCDTDGEPVPTVTWLRK-GQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVV 88 (106)
T ss_dssp SSCCCEEEECCCC-EEESSSSCEECCEEEECSSCCBCCBCSS-SSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEEC
T ss_pred CCCCCEEEECCCC-EEEeCCCcEEEEEEEEEcCCCEEEEEEC-CEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEE
Confidence 3678899999998 9999999999999999999999999999 7777666676642 578999999 699999999
Q ss_pred EEecCcceEEEEEEEEE
Q psy8771 175 AASVLGVIETSTIVKVQ 191 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~ 191 (904)
|.|..|..+..+.|.|.
T Consensus 89 a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 89 VENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CBCSSCBCCEEEEEEEC
T ss_pred EEeCCCeEEEEEEEEEE
Confidence 99999998888888875
No 285
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.26 E-value=3.9e-11 Score=125.63 Aligned_cols=235 Identities=13% Similarity=0.136 Sum_probs=133.5
Q ss_pred CCCCcEEEeccCC-ceEEEEeCCCCC--------------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCC
Q psy8771 36 APRDVQVRPLSSS-TMVIQWDEPETP--------------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPV 100 (904)
Q Consensus 36 ~p~~l~~~~~~~~-s~~v~W~~~~~~--------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~ 100 (904)
....|.|...+.+ ...|.|.+.... ++.+........|.....|...+..........+.+
T Consensus 21 ~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~v---- 96 (315)
T 1itb_B 21 EIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKF---- 96 (315)
T ss_dssp SCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEECCCEE----
T ss_pred CcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEEEEEEE----
Confidence 5556666655555 678999876421 233444444444555555554433221222222222
Q ss_pred CCCCCeEEcCCC--CceEEecCCCeEEEEEE------ccCCCCeEEEeeCCccccC-CCCceeecceEEEEeee--cCCe
Q psy8771 101 RRVPPQFSIPPP--ALLEVMLDSPLNLSCVA------VGSPMPFVKWRKGQNIELT-PDDKLPVGRNVLTLDRV--TESE 169 (904)
Q Consensus 101 ~~~~P~~~~~~~--~~~~~~~g~~~~l~C~~------~g~p~p~i~W~k~~~~~~~-~~~~~~~~~~~l~i~~l--~d~g 169 (904)
...+|.+...+. ....+..|+.+.|.|.+ .|.|.+.|+|+|+ +..+. ...++...++.|.|.++ +|+|
T Consensus 97 ~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~-~~~l~~~~~~~~~~~~~L~i~~v~~~d~G 175 (315)
T 1itb_B 97 VENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKD-CKPLLLDNIHFSGVKDRLIVMNVAEKHRG 175 (315)
T ss_dssp ECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEET-TEECCCCSSSEEEETTEEEESSCCGGGCE
T ss_pred eCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEEC-CEECCCccceEeecCceEEEEeceehhCc
Confidence 234444433322 11678899999999998 8999999999999 55553 44566667889999999 6999
Q ss_pred EEEEEEE-ecCcceE---EEEEEEEEee---cCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC--
Q psy8771 170 NYTCIAA-SVLGVIE---TSTIVKVQCK---YAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA-- 240 (904)
Q Consensus 170 ~Y~c~a~-n~~g~~~---~~~~l~v~~~---~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~-- 240 (904)
.|+|.|. |..|... ....+.+... ..|.+.. ++.. .+.......++|.+...+.+... +.|...+.
T Consensus 176 ~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~--~~~~-~~~~~~g~~v~l~C~~~g~P~p~--i~W~~~g~~i 250 (315)
T 1itb_B 176 NYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVS--PANE-TMEVDLGSQIQLICNVTGQLSDI--AYWKWNGSVI 250 (315)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECS--CCSE-EEECCSSSCEEEEEEEEECTTSE--EEEEETTEEC
T ss_pred EEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEec--CCCC-cEEEeCCCcEEEEEEEecCCCCe--eEEEECCEEC
Confidence 9999999 7888763 3333333310 1111111 1111 11222234455555443222222 33433221
Q ss_pred --CCC-----eEEeec-------ceeceEEEcCCCCCC-eEEEEEEEEcCCCCCC
Q psy8771 241 --NTP-----YSEISG-------IITTYYTVRNLSPYT-EYEFYIIAVNNLGRGP 280 (904)
Q Consensus 241 --~~~-----~~~~~~-------~~~~~~~i~~L~p~~-~Y~~~v~a~n~~g~s~ 280 (904)
... ...... .....|.|.++...+ .+.|+|.|.|..|...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~ 305 (315)
T 1itb_B 251 DEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDA 305 (315)
T ss_dssp CTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEE
T ss_pred CcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCcee
Confidence 110 000110 123479999999999 9999999999999754
No 286
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.26 E-value=2.5e-11 Score=102.15 Aligned_cols=85 Identities=19% Similarity=0.269 Sum_probs=67.6
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCcee--e-------cceEEEEeee--cCCeE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLP--V-------GRNVLTLDRV--TESEN 170 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~--~-------~~~~l~i~~l--~d~g~ 170 (904)
..||+|..... ...|+.+.|.|.+.|.|.|.|+|+|+ +..+..+.++. . ..+.|.|.++ +|+|.
T Consensus 2 ~~pP~i~~~~~----~~~~~~~~~~c~v~G~P~P~i~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 76 (103)
T 1wwb_X 2 HFAPTITFLES----PTSDHHWCIPFTVKGNPKPALQWFYN-GAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGD 76 (103)
T ss_dssp CCCCCCCCCCC----CCCCCEEEEEEEEECSSCCEEEEEET-TEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEE
T ss_pred CCCCEEEeccC----ceECcEEEEEEEEEEeCCCEEEEEEC-CEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEE
Confidence 46777653322 24678899999999999999999999 77776665431 1 2345999999 69999
Q ss_pred EEEEEEecCcceEEEEEEEEE
Q psy8771 171 YTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 171 Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
|+|.|.|..|..+.++.|.|.
T Consensus 77 Y~C~A~N~~G~~~~~~~l~V~ 97 (103)
T 1wwb_X 77 YTLIAKNEYGKDEKQISAHFM 97 (103)
T ss_dssp EEEEEECSSCEEEEEEEECCS
T ss_pred EEEEEEeCCCcEeEEEEEEEC
Confidence 999999999999999998887
No 287
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.25 E-value=5.1e-11 Score=116.15 Aligned_cols=167 Identities=17% Similarity=0.218 Sum_probs=112.2
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccc------------cCCCCceeecceEEEEeee--cCC
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIE------------LTPDDKLPVGRNVLTLDRV--TES 168 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~------------~~~~~~~~~~~~~l~i~~l--~d~ 168 (904)
.++.|...+.. +.+.+|+++.|.|.+.|.|.+.|.|+|+ +.. .....|+......|.|.++ +|+
T Consensus 3 ~~~~i~~~~~~-~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~ 80 (209)
T 1nbq_A 3 GSVTVHSSEPE-VRIPENNPVKLSCAYSGFSSPRVEWKFD-QGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDT 80 (209)
T ss_dssp CCCEEECSCSB-CCEETTCCCEEECEEESCSSEEEEEEEE-ETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSC
T ss_pred ceEEEEcCCCc-eEEEcCCCEEEEEEEeCCCCcEEEEEEc-CCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHC
Confidence 35567777777 9999999999999999999999999998 433 2234566666689999999 699
Q ss_pred eEEEEEEEecCcc--eEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeC-CCccceEEEEEEEeCCCCCCeE
Q psy8771 169 ENYTCIAASVLGV--IETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTY-PSETLLYYVIQYKPKAANTPYS 245 (904)
Q Consensus 169 g~Y~c~a~n~~g~--~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~-~~~~~~~y~v~~~~~~~~~~~~ 245 (904)
|.|+|.+.|..|. .+....|.|. ..| ..+..+....+ .....++|.+.. .+.+.. .+.|...+......
T Consensus 81 G~Y~C~~~~~~g~~~~~~~~~l~V~--~~p--~~~~~~~~~~~--~~g~~~~l~C~~~~~~p~~--~v~W~~~~~~~~~~ 152 (209)
T 1nbq_A 81 GTYTCMVSEEGGNSYGEVKVKLIVL--VPP--SKPTVNIPSSA--TIGNRAVLTCSEQDGSPPS--EYTWFKDGIVMPTN 152 (209)
T ss_dssp SEEEEEEEETTSSCEECCEEECCEE--BCC--CCCCCCCBSEE--ETTSCEEECCCCCSCBSCC--EEEEEETTCCCCSC
T ss_pred cEEEEEEecCCCCccceEEEEEEEe--cCC--cCCCcccccce--ecCCEEEEEEeCCCCCCCc--eeEEEECCeeCCCc
Confidence 9999999998764 3445566665 221 11112222222 334567777775 333333 45554443221100
Q ss_pred -----------EeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 246 -----------EISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 246 -----------~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
.........+.|.++...+.+.|+|.|.|..|..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~ 197 (209)
T 1nbq_A 153 PKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTP 197 (209)
T ss_dssp SSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCC
T ss_pred cccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcc
Confidence 0011134679999999999999999999999876
No 288
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.25 E-value=9.9e-11 Score=114.84 Aligned_cols=171 Identities=15% Similarity=0.195 Sum_probs=112.6
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecC
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVL 179 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~ 179 (904)
...++|...|.+ +.+.+|+.+.|.|.+.|.|.+.|.|+|+ +..+... ....|.|.++ +|+|.|+|.+.|..
T Consensus 16 ~~~~~i~~~p~~-~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~~~n~~ 88 (218)
T 3k0w_A 16 PRGSKITVNPES-KAVLAGQFVKLCCRATGHPFVQYQWFKM-NKEIPNG-----NTSELIFNAVHVKDAGFYVCRVNNNF 88 (218)
T ss_dssp ---CCEEECCCC-EEEETTSBEEEECEETTTTSSEEEEEET-TEECTTC-----CSSEEEETTCCGGGCEEEEEEEECTT
T ss_pred CCCCEEEECCCC-eEEeCCCcEEEEeeecCCCCCEEEEEEC-CEECCCC-----CCCEEEEccCChhhCeEeEEEEEcCC
Confidence 566788888988 9999999999999999999999999999 6555432 4568999998 69999999999988
Q ss_pred cce-EEEEEEEEEeecCCC-CC----C---C---CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEe
Q psy8771 180 GVI-ETSTIVKVQCKYAPL-LT----L---P---VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEI 247 (904)
Q Consensus 180 g~~-~~~~~l~v~~~~~~~-~~----~---P---~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~ 247 (904)
|.. +..+.|.|....... .. . | ..|....+. ....++|.+...+.+... +.|...+. .+
T Consensus 89 ~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~--~G~~v~L~C~~~g~p~~~--v~W~~~~~-----~~ 159 (218)
T 3k0w_A 89 TFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLM--PGSTLVLQCVAVGSPIPH--YQWFKNEL-----PL 159 (218)
T ss_dssp CCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEEC--TTCCEEEECEEEBSSCCE--EEEEETTE-----EC
T ss_pred CCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeec--CCCcEEEEEEecccCCCe--EEEEECCE-----EC
Confidence 764 455777776211000 00 0 0 012222222 234566666553322222 44544321 12
Q ss_pred ecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEec
Q psy8771 248 SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289 (904)
Q Consensus 248 ~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t 289 (904)
.......+.|.++...+.+.|+|.|.|..|... +..+.+..
T Consensus 160 ~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~-s~~~~l~V 200 (218)
T 3k0w_A 160 THETKKLYMVPYVDLEHQGTYWCHVYNDRDSQD-SKKVEIII 200 (218)
T ss_dssp TTCCSSEEEESSCCGGGCEEEEEEEECSSCEEE-CCCEEEEE
T ss_pred CCCCCCEEEEeecChhcCEEEEEEEEcCCCCce-eeeEEEEE
Confidence 223346799999999999999999999887533 34444433
No 289
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.25 E-value=3.9e-11 Score=102.63 Aligned_cols=96 Identities=21% Similarity=0.309 Sum_probs=78.4
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCC----Cc-eeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEE
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSG----EN-IISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAA 694 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~----~~-~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a 694 (904)
.+.+|..+.+.+++.++++|+|.++.+++ .. +.+|.|+........+..+.....+.+++.+|+|++.|.|+|+|
T Consensus 15 pp~~P~~p~v~~vt~~Sv~LsW~~p~~~g~~~g~~~I~~Y~ve~~~~~~~~~~~v~~~~~t~~~v~gL~p~t~Y~frV~A 94 (120)
T 1wfu_A 15 PLSKPHPPVVGKVTHHSIELYWDLEQKEKRQGPQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKFRLKV 94 (120)
T ss_dssp CCCCCCCCBCCCEETTEEEEECTTTSCSCCCSCGGGCCEEEEEEECTTTCCEEEEEEESCSEEEEESCCTTCEEEEEEEE
T ss_pred CCCCCCCceeceEECCEEEEEECCCccCCccCCCCceEEEEEEEecCCCCceEEEecCCccEEEECCCCCCCEEEEEEEE
Confidence 45677777888999999999999998654 34 89999994443444455555555678999999999999999999
Q ss_pred EcCCCCCCCCCCeeEEecCCC
Q psy8771 695 QSPRGEGATTPPIPVRTKQYV 715 (904)
Q Consensus 695 ~~~~G~~~~s~~~~~~t~~~~ 715 (904)
+|..|.|.+|..+.++|...+
T Consensus 95 ~n~~G~s~~S~~~~~~T~~~p 115 (120)
T 1wfu_A 95 TSPSGEYEYSPVVSVATTRES 115 (120)
T ss_dssp ECSSSCEEECCCEEEECCCCC
T ss_pred ECCCCCCCCCccEeeEcCCCC
Confidence 999999999999999998763
No 290
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.25 E-value=3.6e-11 Score=130.59 Aligned_cols=188 Identities=9% Similarity=-0.028 Sum_probs=111.4
Q ss_pred CcceeeeccceEEE-----EecCCCCCcceeeEeeCCCCCCCCcEEEecc-CCceEEEEeCCCCC--C------------
Q psy8771 2 DTRCYVESPEEVFI-----ILCPLPPLIPGYILVTEPGTAPRDVQVRPLS-SSTMVIQWDEPETP--N------------ 61 (904)
Q Consensus 2 ~~~~~~~~~~~~~~-----~~~~~~p~~~~~~~~~~p~~~p~~l~~~~~~-~~s~~v~W~~~~~~--~------------ 61 (904)
.|+|.|.+..+... +-...+|..+.. ......+....|.|...+ .+.+.|.|.+.... .
T Consensus 205 ~Y~C~A~N~~G~~~~~~~~l~V~~~p~~~~~-~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~~~~~~~~~~~~~ 283 (423)
T 3qs7_E 205 DIRCCARNELGRECTRLFTIDLNQTPQTTLP-QLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEMSTYSTN 283 (423)
T ss_dssp CEEEEEECSSCEEEEECEEEESSSCCCSSTT-EEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCGGGEEEEEEEETT
T ss_pred EEEEEEEcCCCCcceeeEEEEEecCCccCCC-ceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccccceeecccccCC
Confidence 48999998765432 222233333221 111222367788888887 66799999876432 1
Q ss_pred ------CceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCC-CceEEecCCCeEEEEEEccCCC
Q psy8771 62 ------GQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPP-ALLEVMLDSPLNLSCVAVGSPM 134 (904)
Q Consensus 62 ------g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~-~~~~~~~g~~~~l~C~~~g~p~ 134 (904)
+.++.......|...+.|...+. ....+.+.| ..+|.+...+. ..+.+.+|+++.|.|.+.|.|.
T Consensus 284 ~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V-----~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P~ 355 (423)
T 3qs7_E 284 RTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTI-----VEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQ 355 (423)
T ss_dssp TEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEE-----ESSCEEEEC---CEECCCTTCCCCEEEEEEEESC
T ss_pred ceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEE-----EeCCcceEcCCCccEEecCCCeEEEEEEEEEcCC
Confidence 11222233444544555554444 444555554 34566655442 2378889999999999999999
Q ss_pred CeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcc
Q psy8771 135 PFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLD 206 (904)
Q Consensus 135 p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~ 206 (904)
|.|+|+|+ +..+....+...+...+.+..+ +|+|.|+|.|.|..|..+.+..|.|. ..|.+|..
T Consensus 356 p~i~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~~D~G~YtC~A~N~~G~~~~s~~L~v~-------~~p~~~~~ 421 (423)
T 3qs7_E 356 IRCTWTFS-RKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR-------SGTKHHHH 421 (423)
T ss_dssp CEEEEEET-TEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC-----------------
T ss_pred CeEEEEEC-CEECCCccccccCCcEEEEEecccccCEEEEEEEEcCCceEEEEEEEEEe-------cCCccccc
Confidence 99999999 7666543321112222222333 69999999999999999999999999 67766654
No 291
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.25 E-value=1.8e-11 Score=106.32 Aligned_cols=104 Identities=22% Similarity=0.309 Sum_probs=82.4
Q ss_pred ecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEE
Q psy8771 711 TKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYR 789 (904)
Q Consensus 711 t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~ 789 (904)
+...+|. +|.++++...+.+++.|+|+++. ..++.+.+|.|+|+..+... .+...... ..+.+++.+|.+++.|.
T Consensus 11 ~~~~~P~-~P~~~~~~~~~~~sv~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~-~~~~~~~~~~~~~~~i~~L~p~t~Y~ 86 (117)
T 1uem_A 11 DLSDLPG-PPSKPQVTDVTKNSVTLSWQPGT--PGTLPASAYIIEAFSQSVSN-SWQTVANHVKTTLYTVRGLRPNTIYL 86 (117)
T ss_dssp CSCCSCB-CCCCCEEEEECSSCEEEECCCCB--CSSSCCCEEEEEEEETTTEE-EEEEEEEEECSSEEEECSCCTTCEEE
T ss_pred CCCCCcc-CCCCCEEEEecCCEEEEEEeCCC--CCCcCceEEEEEEEECCCCC-ceeEcccccCcCEEEECCCCCCCEEE
Confidence 4444555 68899999999999999999984 56778999999998864211 12222233 78899999999999999
Q ss_pred EEEEEeeCCCCCCCCCcEE-eecCCCCCCC
Q psy8771 790 IWVLAGTSIGDGPSSYPIT-IRTHEDDPSE 818 (904)
Q Consensus 790 ~~V~a~~~~g~g~~s~~~~-~~t~~~~P~~ 818 (904)
|+|+|.|..|.|.+|.... ++|.+.+|.+
T Consensus 87 frV~A~n~~G~s~~S~~~~~v~t~~~~P~~ 116 (117)
T 1uem_A 87 FMVRAINPQGLSDPSPMSDPVRTQDSGPSS 116 (117)
T ss_dssp EEEEEEETTEEEEECCCCCCEECCCSSCCC
T ss_pred EEEEEECCCccCCCcCCCccEEccCCCCCC
Confidence 9999999999998888776 8888877753
No 292
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.25 E-value=2.4e-11 Score=102.09 Aligned_cols=90 Identities=22% Similarity=0.297 Sum_probs=74.8
Q ss_pred CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEE
Q psy8771 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVL 793 (904)
Q Consensus 715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~ 793 (904)
.|..+|.+|++..++.+++.|+|+++. +.+.+|+|+|+..++... ....+. ..+++.|.+|.|++.|.|+|.
T Consensus 6 ~p~~pP~~l~~~~vt~tsi~vsW~pp~-----~~i~~Y~I~y~~~~~~~~--~~~~v~~~~t~~~l~~L~p~T~Y~v~V~ 78 (108)
T 2ee3_A 6 SGLAPPRHLGFSDVSHDAARVFWEGAP-----RPVRLVRVTYVSSEGGHS--GQTEAPGNATSAMLGPLSSSTTYTVRVT 78 (108)
T ss_dssp CCCCCSSCEEEESCCSSCEEEEESCCS-----SCCSEEEEEEEETTTCCB--CCEEEETTCCEEEECSCCSSCEEEEEEE
T ss_pred cCCCCCceEEEEEccCCeEEEEeeCCC-----CCccEEEEEEEeCCCCce--eEEEcCCCcCEEEcCCCCCCCEEEEEEE
Confidence 356689999999999999999999873 679999999998765332 223445 788999999999999999999
Q ss_pred EeeCCCCCCCCCcEEeecC
Q psy8771 794 AGTSIGDGPSSYPITIRTH 812 (904)
Q Consensus 794 a~~~~g~g~~s~~~~~~t~ 812 (904)
|.|..|.|+.+. ..++|.
T Consensus 79 A~~~~g~s~p~~-~~~~T~ 96 (108)
T 2ee3_A 79 CLYPGGGSSTLT-GRVTTK 96 (108)
T ss_dssp EECTTSCEEEEE-EEEECC
T ss_pred EEeCCCcCCCcc-CEEEeC
Confidence 999999988775 468886
No 293
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.25 E-value=1.8e-10 Score=109.76 Aligned_cols=170 Identities=9% Similarity=0.067 Sum_probs=108.8
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC---CCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP---DDKLPVGRNVLTLDRV--TESENYTCIAAS 177 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~---~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n 177 (904)
.+|.|...|.. .+.+|++++|.|.+.+. .+.+.|+|+ +..+.. ..+....++.|.|.++ +|+|.|+|.+.|
T Consensus 3 ~~P~i~~~p~~--~v~~G~~v~L~C~~~~~-~~~~~w~k~-g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 78 (188)
T 1oll_A 3 PKPFIWAEPHF--MVPKEKQVTICCQGNYG-AVEYQLHFE-GSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRV 78 (188)
T ss_dssp CCCEEEEESCS--EEETTCCEEEEEECCTT-CCEEEEEET-TEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEeecCC--cCCCCCCEEEEEecCCC-CCEEEEEEC-CCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecC
Confidence 46788877764 78899999999999875 468999999 544321 1112235678999999 699999999998
Q ss_pred cCcce--EEEEEEEEEeecCCCCCCCCCCcceEE----EeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecce
Q psy8771 178 VLGVI--ETSTIVKVQCKYAPLLTLPVAPLDVKI----SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGII 251 (904)
Q Consensus 178 ~~g~~--~~~~~l~v~~~~~~~~~~P~~p~~l~~----~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~ 251 (904)
..|.. +..+.|.|. ..+.+|. +.. .......++|.+.....+. . +.|...+............
T Consensus 79 ~~~~~~~s~~~~l~V~-------~~~~~p~-i~~~p~~~v~~G~~v~L~C~~~~~~~-~--~~w~k~g~~~~~~~~~~~~ 147 (188)
T 1oll_A 79 GELWSEPSNLLDLVVT-------EMYDTPT-LSVHPGPEVISGEKVTFYCRLDTATS-M--FLLLKEGRSSHVQRGYGKV 147 (188)
T ss_dssp TTEECCCCCCEEEEEE-------SCSCCCE-EEEESCSEEETTCEEEEEEECSSSCS-E--EEEEEESSSCEEEEEECSS
T ss_pred CCCCCCCCCceEEEec-------ccCCCCe-EEECCCCccccCCEEEEEEEcCCCCC-E--EEEEECCccccccccCCCc
Confidence 76542 445666766 2222221 111 1134567888888654332 3 3343332222211122344
Q ss_pred eceEEEcCCCCCCeEEEEEEEEcCC-CCCCCCCCeEE
Q psy8771 252 TTYYTVRNLSPYTEYEFYIIAVNNL-GRGPPSSPAVI 287 (904)
Q Consensus 252 ~~~~~i~~L~p~~~Y~~~v~a~n~~-g~s~~s~~~~~ 287 (904)
...|.|.+++..+.+.|+|.|.|.. ..+..|.++.+
T Consensus 148 ~~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l 184 (188)
T 1oll_A 148 QAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKL 184 (188)
T ss_dssp EEEEEEEECCGGGCEEEEEECEEETTEECCCCCCEEE
T ss_pred eeEEEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEE
Confidence 5789999999999999999999875 22344555444
No 294
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.25 E-value=2.3e-10 Score=109.44 Aligned_cols=159 Identities=13% Similarity=0.209 Sum_probs=106.6
Q ss_pred EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEEEecCc
Q psy8771 107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIAASVLG 180 (904)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a~n~~g 180 (904)
|...|.+ +.+.+|+++.|.|.+.|.|. .|.|+++++..+....++... ...|.|.++ +|+|.|+|.+.|..|
T Consensus 5 ~~~~~~~-~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 82 (189)
T 2v44_A 5 VTISLSK-VELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKG 82 (189)
T ss_dssp EEESCSE-EEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred EEecCCc-eEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCC
Confidence 5556666 89999999999999999988 899999437777766666542 248999999 699999999999988
Q ss_pred ce-EEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC------CCeEEeecceec
Q psy8771 181 VI-ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN------TPYSEISGIITT 253 (904)
Q Consensus 181 ~~-~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~------~~~~~~~~~~~~ 253 (904)
.. +....|.|.. .+.. +..+....+. ....++|.+...+.+... +.|...+.. ..+... ...
T Consensus 83 ~~~~~~~~l~v~~--~p~~--~~~~~~~~~~--~g~~~~l~C~~~g~p~p~--v~W~~~~~~~~~~~~~~~~~~---~~~ 151 (189)
T 2v44_A 83 QTQEATVVLEIYQ--KLTF--REVVSPQEFK--QGEDAEVVCRVSSSPAPA--VSWLYHNEEVTTISDNRFAML---ANN 151 (189)
T ss_dssp CEEEEEEEEEEEC--CCEE--ESCCCSEEEE--TTSCEEECCEEECSSCCE--EEEEEEC--CEECCCTTEEEC---TTS
T ss_pred CcEEEEEEEEEec--CCce--eecCCcEEEe--CCCCEEEEEEECcCCCCc--EEEEECCcEEeccCCCCEEEe---cCC
Confidence 75 5667777761 1111 1123333333 234455555544333322 334332211 111111 224
Q ss_pred eEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771 254 YYTVRNLSPYTEYEFYIIAVNNLGR 278 (904)
Q Consensus 254 ~~~i~~L~p~~~Y~~~v~a~n~~g~ 278 (904)
.+.|.++...+.+.|+|.|.|..|.
T Consensus 152 ~L~i~~v~~~d~G~Y~C~a~n~~~~ 176 (189)
T 2v44_A 152 NLQILNINKSDEGIYRCEGRVEARG 176 (189)
T ss_dssp CEEETTCCGGGCEEEEEEEEETTTT
T ss_pred cEEEEEcCcccCeEEEEEEEccccC
Confidence 7999999999999999999998764
No 295
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.25 E-value=2.2e-11 Score=106.42 Aligned_cols=113 Identities=20% Similarity=0.374 Sum_probs=85.4
Q ss_pred CCCCCCCCCeeEEecCCCCCCCCCCc--EEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-Cc
Q psy8771 698 RGEGATTPPIPVRTKQYVPGAPPQNV--SCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQ 774 (904)
Q Consensus 698 ~G~~~~s~~~~~~t~~~~p~~~P~~l--~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~ 774 (904)
.|.+..+..+.+.+. |. +|.++ .+...+.+++.|+|.++ ...++++.+|.|+|+..+ ..+......+. ..
T Consensus 3 ~G~~~~s~~l~v~~~---P~-~P~~~~~~~~~~~~~sv~l~W~~p--~~~~~~i~~Y~v~~~~~~-~~~~~~~~~~~~~~ 75 (121)
T 1wf5_A 3 SGSSGRSAHLRVRQL---PH-APEHPVATLSTVERRAINLTWTKP--FDGNSPLIRYILEMSENN-APWTVLLASVDPKA 75 (121)
T ss_dssp CCCCCCCCCSSCCCC---CC-CCSSCEEEECSSSTTEEEEECCCC--CCCSSCEEEEEEEEECTT-CCCEEEESSCCTTC
T ss_pred CCcccceEEEEEeeC---Cc-cCCCcceeeEeccCCEEEEEEcCC--CCCCCcceEEEEEEEcCC-CCceEeEcccCCCc
Confidence 344444544544433 43 67888 88888999999999988 456778999999999875 22211101233 77
Q ss_pred ceEEecCCCCCceEEEEEEEeeCCCCCCCCCcE-EeecCCCCCC
Q psy8771 775 TSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPI-TIRTHEDDPS 817 (904)
Q Consensus 775 ~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~-~~~t~~~~P~ 817 (904)
+.++|.+|.|++.|.|+|+|.|..|.|.+|... .++|.+.+|+
T Consensus 76 ~~~~v~~L~p~t~Y~frV~A~n~~G~s~~S~~~~~~~t~~~~P~ 119 (121)
T 1wf5_A 76 TSVTVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPESGPS 119 (121)
T ss_dssp CEEEEESCCTTCEEEEEEEEEESSCEEEECCCCSCEECCCCSSC
T ss_pred cEEEECCcCCCCEEEEEEEEEcCCccCCCcCCcceeEcCCCCCC
Confidence 899999999999999999999999999999876 5888888774
No 296
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.25 E-value=8.3e-10 Score=115.40 Aligned_cols=163 Identities=12% Similarity=0.052 Sum_probs=106.2
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEec
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASV 178 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~ 178 (904)
...+|.|...|. ..+.+|++++|.|.+.|. .+.+.|+|+ +..+....+.....+.|.|.++ +|+|.|+|.|.|.
T Consensus 21 ~~~~P~i~~~p~--~~v~~G~~v~L~C~~~~~-~~~~~W~k~-g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 96 (316)
T 3vh8_G 21 GQDKPFLSAWPS--AVVPRGGHVTLRCHYRHR-FNNFMLYKE-DRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHP 96 (316)
T ss_dssp ---CCEEEEESC--SEEETTSCEEEEEEBTTB-CCSEEEEES-SCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCS
T ss_pred CCCCCEeeccCC--CccCCCCCEEEEEEccCC-CceEEEEeC-CCccceeecCCcceEEEEECCCCcccCeEEEEEEEcC
Confidence 457888888887 567899999999999998 678999999 5544332222335778999999 6999999999864
Q ss_pred Cc-----ceEEEEEEEEEeecCCCCCCCCCCcceEEE----eecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEE---
Q psy8771 179 LG-----VIETSTIVKVQCKYAPLLTLPVAPLDVKIS----EVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSE--- 246 (904)
Q Consensus 179 ~g-----~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~----~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~--- 246 (904)
.+ ..+....|.|. ..+.+|. +... ......++|.+.....+ ..|. |...+.......
T Consensus 97 ~~~~~~~~~s~~~~l~V~-------~~~~~p~-~~~~~~~~v~~G~~v~L~C~~~~~~-~~~~--w~k~g~~~~~~~~~~ 165 (316)
T 3vh8_G 97 HSPTGWSAPSNPVVIMVT-------GNHRKPS-LLAHPGPLVKSGERVILQCWSDIMF-EHFF--LHKEGISKDPSRLVG 165 (316)
T ss_dssp SSSSSBCCCCCCEEEEEE-------CSSCCCE-EEEESCSEEETTCCEEEEEEESSCC-SEEE--EEETTCCSCCEEEEC
T ss_pred CCCcceecCCCcEEEEEe-------cCCCCCe-EEecCCCccCCCCeEEEEEcCCCCC-cEEE--EEECCCccccceeee
Confidence 32 34455667776 3322222 1111 12345677888765332 2333 333322221111
Q ss_pred --eecceeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771 247 --ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278 (904)
Q Consensus 247 --~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~ 278 (904)
........|.|.++...+.+.|+|.|.|..|.
T Consensus 166 ~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 199 (316)
T 3vh8_G 166 QIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTP 199 (316)
T ss_dssp EEETTEEEEEEEECSCCGGGCEEEEEEEECTTCT
T ss_pred eecCCCceEEEEECCCChhhCceEEEEEecCCCC
Confidence 11234577999999999999999999999875
No 297
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.25 E-value=7.3e-11 Score=113.44 Aligned_cols=152 Identities=18% Similarity=0.232 Sum_probs=107.2
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC--------------CC--ceecccccccccceEEEEeeeccCCeeeeeeeeccCC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP--------------NG--QITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADP 99 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~--------------~g--~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~ 99 (904)
....|.|...+.+...|.|.+.... ++ .+........+.....|...+..........+.+..
T Consensus 21 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~- 99 (194)
T 2a38_A 21 STATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKA- 99 (194)
T ss_dssp SCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC-
T ss_pred CEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEEcc-
Confidence 5667777776777789999775321 11 123333344444444455544333333344444432
Q ss_pred CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEE
Q psy8771 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTC 173 (904)
Q Consensus 100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c 173 (904)
...+|.+...+.. ..+..|+.+.|.|.+.|.|.|.+.|+++ +..+....++... ...|.|.++ +|+|.|+|
T Consensus 100 -~~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 176 (194)
T 2a38_A 100 -ETAPPNFVQRLQS-MTVRQGSQVRLQVRVTGIPTPVVKFYRD-GAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSV 176 (194)
T ss_dssp -CCEEEEEEECCCC-EEECTTEEEEEEEEEEEESCCEEEEEET-TEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEE
T ss_pred -CCCCCEEEeCCcc-EEEcCCCEEEEEEEEEEecCCeEEEEEC-CEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEE
Confidence 2467888888877 8999999999999999999999999999 7777666665542 227999999 69999999
Q ss_pred EEEecCcceEEEEEEEEE
Q psy8771 174 IAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 174 ~a~n~~g~~~~~~~l~v~ 191 (904)
.|.|..|.....+.|.|+
T Consensus 177 ~a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 177 NATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEEETTEEEEEEEEEEEC
T ss_pred EEEeCCCceEEEEEEEEC
Confidence 999999998888888763
No 298
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.25 E-value=4.5e-11 Score=115.29 Aligned_cols=154 Identities=14% Similarity=0.210 Sum_probs=105.5
Q ss_pred CCCCcEEEeccCCceEEEEeCCCC--------------CCC--ceecccccccccceEEEEeeeccCCeeeeeeeeccCC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPET--------------PNG--QITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADP 99 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~--------------~~g--~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~ 99 (904)
....|.|...+.+...+.|.+... .+| .+........+.....|...+........+.+.+...
T Consensus 20 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~ 99 (197)
T 2j8h_A 20 SNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVP 99 (197)
T ss_dssp SCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred CEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEEEEcCC
Confidence 566777777777888999977521 122 2333334444555555555544332334444554332
Q ss_pred CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEee-e--cCCeEEE
Q psy8771 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDR-V--TESENYT 172 (904)
Q Consensus 100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~-l--~d~g~Y~ 172 (904)
.....|.+...+.. ..+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.+ ..+.|.|.+ + +|+|.|+
T Consensus 100 p~~~~~~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~i~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~ 177 (197)
T 2j8h_A 100 AKIHLPKTLEGMGA-VHALRGEVVSIKIPFSGKPDPVITWQKG-QDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYV 177 (197)
T ss_dssp EEECCSSCBTTBEE-EEEETTCCCEEEEEEEEESCCEEEEEES-SCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEE
T ss_pred CcCCCCccccccCe-EEEeCCCEEEEEEEEEecCCCcEEEEEC-CEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEE
Confidence 22223333333344 7889999999999999999999999999 777766656553 456899998 7 6999999
Q ss_pred EEEEecCcceEEEEEEEEE
Q psy8771 173 CIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 173 c~a~n~~g~~~~~~~l~v~ 191 (904)
|.|.|..|..+..+.|.|.
T Consensus 178 C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 178 VCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp EEEEETTEEEEEEEEEEEE
T ss_pred EEEEeCCCcEeEEEEEEEe
Confidence 9999999999888888875
No 299
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=99.24 E-value=8.3e-11 Score=98.65 Aligned_cols=90 Identities=23% Similarity=0.368 Sum_probs=75.3
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc-c-ceEEecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA-K-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSP 697 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~-~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~ 697 (904)
.+.+|.+|++.+++.+++.|+|.++...++.+.+|.|+|...+... . ........++++|.+|+|++.|.|+|+|+|.
T Consensus 7 ~~~~P~~l~v~~~t~~Sv~lsW~~p~~~~g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~~L~p~t~Y~~~V~A~~~ 86 (103)
T 3t04_D 7 VSSVPTKLEVVDATPTSLKISWDAYYSSWQNVKYYRITYGETGGDSPVQEFTVPGYYSTATISGLKPGVDYTITVYAYDT 86 (103)
T ss_dssp CCCCCCSCEEEEEETTEEEEECTTTTTTSCCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCCEEEEEEEESC
T ss_pred cCCCCceeEEEecCCCEEEEEccCCCCCCCccceEEEEEEECCCCCccEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEeC
Confidence 5689999999999999999999998877889999999999875432 2 2334456789999999999999999999999
Q ss_pred --CCCCCCCCCeeEE
Q psy8771 698 --RGEGATTPPIPVR 710 (904)
Q Consensus 698 --~G~~~~s~~~~~~ 710 (904)
.|.++ |.++.+.
T Consensus 87 ~~~G~~~-S~p~~~~ 100 (103)
T 3t04_D 87 FFPGYEP-NSPISIN 100 (103)
T ss_dssp CCTTCCC-SCCEEEE
T ss_pred CCCCCCC-CCCEEEe
Confidence 88887 6666543
No 300
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.24 E-value=8.8e-11 Score=117.43 Aligned_cols=153 Identities=16% Similarity=0.212 Sum_probs=103.0
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC---------------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP---------------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPV 100 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~---------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~ 100 (904)
....|.|...+.+.+.|.|.+.... ++.++...+...+.....|...+..........+.+....
T Consensus 31 ~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~ 110 (241)
T 3grw_A 31 NTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERS 110 (241)
T ss_dssp SEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCC
T ss_pred CeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEEEEEEeccC
Confidence 5666777777777889999865211 1123333344445454555555443334444555554322
Q ss_pred CCCCCeE-EcCCCCceEEecCCCeEEEEEEccCCCCeEEEee----CCccccCCCCcee------------ecceEEEEe
Q psy8771 101 RRVPPQF-SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRK----GQNIELTPDDKLP------------VGRNVLTLD 163 (904)
Q Consensus 101 ~~~~P~~-~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k----~~~~~~~~~~~~~------------~~~~~l~i~ 163 (904)
..+|.+ ...+.. ..+.+|+.+.|.|.+.|.|.+.|.|++ + +..+....... ...+.|.|.
T Consensus 111 -~~~~~~~~~~~~~-~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 187 (241)
T 3grw_A 111 -PHRPILQAGLPAN-QTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVN-GSKVGPDGTPYVTVLKSWISESVEADVRLRLA 187 (241)
T ss_dssp -CCCCEEEECTTCS-EECCTTCCEEEEEEEECSSCCEEEEEEECCSS-SCSSCTTTCCCEEEEEEEECSBSEEEEEEEEC
T ss_pred -CCCceeecCCCcc-ceecCCCEEEEEEEEecCCCCEEEEEEcccCC-CcccCCCCceeeeeeeEeeeeecCCceEEEEC
Confidence 233444 444555 889999999999999999999999999 6 55554432211 135579999
Q ss_pred ee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771 164 RV--TESENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 164 ~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
++ +|+|.|+|.|.|..|..+..+.|.|.
T Consensus 188 ~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 217 (241)
T 3grw_A 188 NVSERDGGEYLCRATNFIGVAEKAFWLSVH 217 (241)
T ss_dssp SCCGGGCEEEEEEEECSSCEEEEEEEEEC-
T ss_pred cCCcccCcEEEEEEecCcceEEEEEEEEec
Confidence 98 69999999999999999999999998
No 301
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=99.24 E-value=1.5e-10 Score=104.16 Aligned_cols=119 Identities=24% Similarity=0.319 Sum_probs=87.3
Q ss_pred CceEEEEcCCCCCCeEEEEEEEEeCCCCCCCCCcEEEe--c-CCCCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEE
Q psy8771 537 NNQLTTISDLTPHTIYTIRVQAFTSVGPGPLSAPVLVK--T-QQGVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISY 613 (904)
Q Consensus 537 ~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~S~~~~~~--t-~~~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y 613 (904)
..+++.+.+++ |+.|.|.++... +.+- + ....|.||.+|++..++.+++.|+|++|...+
T Consensus 116 ~vts~~vgdg~-g~~~~~~~~~k~----------v~i~~~tq~ev~p~Pp~NL~At~VT~tSVtLsW~aP~~~~------ 178 (238)
T 2w1n_A 116 SVTNSSVGDGE-GLVHEIAGTEKT----------VNIIEGTSPEIVVNPVRDFKASEINKKNVTVTWTEPETTE------ 178 (238)
T ss_dssp EEEEEEEECTT-SCEEECBCEEEE----------EEEECCCCCCCCCCCCEEEEEEEECSSCEEEEEECCSCCT------
T ss_pred ceeeEEEecCC-CcEEEeecccee----------eeeccCCCCcCccCCCCceEEEEccCCeEEEEecCCCCCC------
Confidence 34678899999 999998776221 1111 1 22356889999999999999999999997632
Q ss_pred EEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEE
Q psy8771 614 ELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLA 693 (904)
Q Consensus 614 ~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~ 693 (904)
+ +.+|+|++... .........++|++.+|+++|.|.|+|.
T Consensus 179 -----------------------------------G-I~gY~ly~~g~----~v~~v~~~~tsyt~~gLk~~TeYsF~V~ 218 (238)
T 2w1n_A 179 -----------------------------------G-LEGYILYKDGK----KVAEIGKDETSYTFKKLNRHTIYNFKIA 218 (238)
T ss_dssp -----------------------------------T-EEEEEEEETTE----EEEEEETTCCEEEECSCCTTCEEEEEEE
T ss_pred -----------------------------------C-ceeEEEEeCCc----eeEEeeccceEEEecCCCCCCEEEEEEE
Confidence 3 66666665431 1122344557999999999999999999
Q ss_pred EEcCCCCCCCCCCeeEEec
Q psy8771 694 AQSPRGEGATTPPIPVRTK 712 (904)
Q Consensus 694 a~~~~G~~~~s~~~~~~t~ 712 (904)
|++..|.+.....+.++|.
T Consensus 219 A~d~~G~~Ss~e~vtVrTl 237 (238)
T 2w1n_A 219 AKYSNGEVSSKESLTLRTA 237 (238)
T ss_dssp EEETTSCBCCCEEEEEECC
T ss_pred EEeCCCCccccCcEEEEec
Confidence 9999998876667777764
No 302
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.24 E-value=1.2e-10 Score=112.74 Aligned_cols=154 Identities=17% Similarity=0.268 Sum_probs=109.1
Q ss_pred CCCCcEEE-eccCCc-eEEEEeCCCCC--------------CCceecccccccccceEEEEeeeccCCeee---eeeeec
Q psy8771 36 APRDVQVR-PLSSST-MVIQWDEPETP--------------NGQITHPPTRAARSHARLAAQSVLRRGRLA---HAVRQV 96 (904)
Q Consensus 36 ~p~~l~~~-~~~~~s-~~v~W~~~~~~--------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~v 96 (904)
....|.|. ..+.+. +.|.|.+.... ++.+........+.....|...+...+... ...+.+
T Consensus 24 ~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~ 103 (201)
T 3s97_C 24 KGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIP 103 (201)
T ss_dssp CCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEE
T ss_pred CCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcchhhcccceee
Confidence 44455555 445566 89999765311 333444444555555555665554433332 112221
Q ss_pred --cCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEE
Q psy8771 97 --ADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYT 172 (904)
Q Consensus 97 --~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~ 172 (904)
.......+|.+...+.. ..+..|+.++|.|.+.|.|.|.|.|+++ +..+....++...++.|.|.++ +|+|.|+
T Consensus 104 ~~~~~~~~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 181 (201)
T 3s97_C 104 IPERTTKPYPADIVVQFKD-VYALMGQNVTLECFALGNPVPDIRWRKV-LEPMPSTAEISTSGAVLKIFNIQLEDEGIYE 181 (201)
T ss_dssp ECCSSCCCEEEEEEEECCC-EEEETTCCEEEEEEEEEESCCEEEEEET-TBCCCTTCEEETTTTEEEECSCCGGGCEEEE
T ss_pred ccccccCCCCCceEecCCc-eEEecCCcEEEEEEccCCCCCceEEEeC-CCcCCCceeecCCCCEEEEccCChhhCEEEE
Confidence 11233467777777766 9999999999999999999999999999 6677766667677889999999 6999999
Q ss_pred EEEEecCcceEEEEEEEEE
Q psy8771 173 CIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 173 c~a~n~~g~~~~~~~l~v~ 191 (904)
|.|.|..|..+..+.|.|+
T Consensus 182 C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 182 CEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp EEEEETTEEEEEEEEEEEE
T ss_pred EEEEecCCceeeeEEEEEe
Confidence 9999999999999888886
No 303
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.24 E-value=7.2e-12 Score=149.37 Aligned_cols=148 Identities=18% Similarity=0.249 Sum_probs=30.9
Q ss_pred CCCCcEEEecc--CCceEEEEeCCCCCCC----------------------ceecccccccccceEEEEeeeccCCeeee
Q psy8771 36 APRDVQVRPLS--SSTMVIQWDEPETPNG----------------------QITHPPTRAARSHARLAAQSVLRRGRLAH 91 (904)
Q Consensus 36 ~p~~l~~~~~~--~~s~~v~W~~~~~~~g----------------------~i~~~~~~~~~~~~~~~~~~~~~~g~~~~ 91 (904)
....|.|...+ .+.+.+.|.++..... .+........+.....|...+........
T Consensus 240 ~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 319 (772)
T 3v2a_R 240 EKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNS 319 (772)
T ss_dssp CCEEEEEEEEECTTCCCEEEEECC--------CEEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEE
T ss_pred CcEEEEEEEecCCCCceeEEEecCCccCCCceeeeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEE
Confidence 56667776655 5568999987743310 12222233334444445544333223334
Q ss_pred eeeeccCCCCCCCCeEEcCC---CCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--c
Q psy8771 92 AVRQVADPVRRVPPQFSIPP---PALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--T 166 (904)
Q Consensus 92 ~~~~v~~~~~~~~P~~~~~~---~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~ 166 (904)
+.+.+. .+|.+...+ .. ..+.+|+.++|.|.+.|.|.+.|.|+|+ +..+....++. ....|.|.++ +
T Consensus 320 ~~l~V~-----~~p~~~~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~-g~~l~~~~~~~-~~~~L~i~~v~~~ 391 (772)
T 3v2a_R 320 TFVRVH-----EKPFVAFGSGMESL-VEATVGERVRIPAKYLGYPPPEIKWYKN-GIPLESNHTIK-AGHVLTIMEVSER 391 (772)
T ss_dssp EEEEEE-----CCCC-----------------------------------------------------------------
T ss_pred EEEEEe-----CCCeeEeccCCCCc-EEEcCCCcEEEEEEEeeeCCCeEEEEEC-CEeCCCCceEc-cceeEEEecCChh
Confidence 444443 355544332 23 7889999999999999999999999999 76666543333 4578999998 6
Q ss_pred CCeEEEEEEEecCcceEEE--EEEEEE
Q psy8771 167 ESENYTCIAASVLGVIETS--TIVKVQ 191 (904)
Q Consensus 167 d~g~Y~c~a~n~~g~~~~~--~~l~v~ 191 (904)
|+|.|+|.|.|..|....+ ..|.|.
T Consensus 392 d~G~Y~C~a~n~~g~~~~s~~~~l~v~ 418 (772)
T 3v2a_R 392 DTGNYTVILTNPISKEKQSHVVSLVVY 418 (772)
T ss_dssp ---------------------------
T ss_pred cCceEEEEEEECCcCeEEEEEEEEEEe
Confidence 9999999999999876444 444444
No 304
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.24 E-value=2.2e-11 Score=102.40 Aligned_cols=88 Identities=18% Similarity=0.409 Sum_probs=74.1
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC--CCCceeec----ceEEEEeee--cCCeEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT--PDDKLPVG----RNVLTLDRV--TESENYTC 173 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~--~~~~~~~~----~~~l~i~~l--~d~g~Y~c 173 (904)
..||.|...|.. +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+. ...++.+. ...|.|.++ +|+|.|+|
T Consensus 3 ~~pP~i~~~~~~-~~~~~G~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 80 (100)
T 3irg_A 3 GIPPKIEALPSD-ISIDEGKVLTVACAFTGEPTPEVTWSCG-GRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTL 80 (100)
T ss_dssp CEEEEECCCCSE-EEEETTSEEEEEEEEEEESCCEEEEEET-TEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEE
T ss_pred CCCCeeecCCCc-EEEcCCCcEEEEEEEEEcCCCceEEEEC-CEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEE
Confidence 357888888877 9999999999999999999999999998 66664 23455442 368999998 69999999
Q ss_pred EEEecCcceEEEEEEEEE
Q psy8771 174 IAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 174 ~a~n~~g~~~~~~~l~v~ 191 (904)
.|.|..|..+..+.|.|.
T Consensus 81 ~a~n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 81 SLGNEFGSDSATVNIHIR 98 (100)
T ss_dssp EEEETTEEEEEEEEEEEE
T ss_pred EEEeCCCcEEEEEEEEEE
Confidence 999999998888888886
No 305
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.23 E-value=9.4e-11 Score=112.13 Aligned_cols=152 Identities=21% Similarity=0.321 Sum_probs=105.8
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC-------------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP-------------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRR 102 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~-------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~ 102 (904)
....|.|...+.+...+.|.+.... ++.+....+...+.....|...+...+......+.+. +.
T Consensus 18 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~---v~ 94 (189)
T 2v5t_A 18 EDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVI---VN 94 (189)
T ss_dssp SCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEE---EE
T ss_pred CcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEE---ec
Confidence 4555666666667788999765321 3334444455555555566666555554432222211 24
Q ss_pred CCCeEEcCCCC-ceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--cceEEEEeee--cCCeEEEEEEEe
Q psy8771 103 VPPQFSIPPPA-LLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--GRNVLTLDRV--TESENYTCIAAS 177 (904)
Q Consensus 103 ~~P~~~~~~~~-~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n 177 (904)
.+|.+...+.. ...+.+|+.+.|.|.+.|.|.|.|.|+++ +..+....++.. ..+.|.|.++ +|+|.|+|.|.|
T Consensus 95 ~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~-g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 173 (189)
T 2v5t_A 95 VPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRN-GKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATN 173 (189)
T ss_dssp EEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEET-TEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEEC-CEECcCCCcEEEecCCCEEEEcCCChhhCeeEEEEEEe
Confidence 46666655542 26778899999999999999999999999 777776666554 4668999998 699999999999
Q ss_pred cCcceEEEEEEEEE
Q psy8771 178 VLGVIETSTIVKVQ 191 (904)
Q Consensus 178 ~~g~~~~~~~l~v~ 191 (904)
..|....++.|.|.
T Consensus 174 ~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 174 KAGEDEKQAFLQVF 187 (189)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCceeEEEEEEEE
Confidence 99999988888876
No 306
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.23 E-value=4.2e-10 Score=114.08 Aligned_cols=229 Identities=10% Similarity=0.100 Sum_probs=142.0
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCc
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLG 180 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g 180 (904)
.|.|...|.+ +.+.+|+.+.|.|.+.|.|.+ .|+|+|+ +..+.. .+..|.|.++ +|+|.|+|.|.|..+
T Consensus 1 kP~i~~~p~~-~~v~~G~~v~l~C~~~~~~~~~~~~W~~~-g~~~~~------~~~~l~i~~~~~~d~G~Y~C~~~~~~~ 72 (262)
T 3rjd_A 1 KAVITLQPPW-VSVFQEETVTLHCEVLHLPGSSSTQWFLN-GTATQT------STPSYRITSASVNDSGEYRCQRGLSGR 72 (262)
T ss_dssp CCEEEESSCC-SEEETTCCEEEEEECSSCCCTTCEEEEET-TEECSC------CSSEEEESSCCGGGCEEEEEEESSSCC
T ss_pred CCeEecCCCc-EEeeCCCeEEEEEECCCCCCCceEEEEEC-CEEeec------cCCeEEEecCCcccCeEEEEEEecCCc
Confidence 3678888888 899999999999999999988 9999999 665543 3678999998 699999999998665
Q ss_pred ceEEEEEEEEEeecCCCCCCC--CCCcceEEEeecCCeEEEEEeCC-CccceEEEEEEEeCCCCCCeEEeecceeceEEE
Q psy8771 181 VIETSTIVKVQCKYAPLLTLP--VAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEISGIITTYYTV 257 (904)
Q Consensus 181 ~~~~~~~l~v~~~~~~~~~~P--~~p~~l~~~~~~~~sv~l~W~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i 257 (904)
.. ...|.|. ..+ ..|....+ .....+.|.+... +.+. ..+.|...+ .... .......+.|
T Consensus 73 s~--~~~l~v~-------~~~~~~~~~~~~~--~~g~~v~l~C~~~~~~p~--~~v~W~~~g--~~~~--~~~~~~~l~i 135 (262)
T 3rjd_A 73 SD--PIQLEIH-------RGWLLLQVSSRVF--TEGEPLALRCHAWKDKLV--YNVLYYRNG--KAFK--FFHWNSNLTI 135 (262)
T ss_dssp CC--CEEEEEE-------CSSEEEEESCSEE--ETTSCEEEEEEEGGGCCC--EEEEEEETT--EEEE--EEEECCCEEE
T ss_pred cc--cEEEEEe-------ccceEecCCCeEE--ecCCeEEEEEEccCCCCC--ceEEEEECC--cccc--ccCCCCeEEE
Confidence 43 4556665 111 01112222 2344567777653 2222 234444432 1111 1122467999
Q ss_pred cCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEec----ccCCCeeEEEecCCCCCC-ce----eeEE
Q psy8771 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVR----PLSSSTMVIQWDEPETPN-GQ----ITAK 328 (904)
Q Consensus 258 ~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~----~~~~~~v~l~W~~p~~~~-~~----~~~~ 328 (904)
.+++..+.+.|+|.|.|..+... ....+..... .++..+... ......+.|.+.....+. .. +.++
T Consensus 136 ~~~~~~d~G~Y~C~~~n~~~~~~--~~~~l~V~~~---~~~p~~~~~~~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~ 210 (262)
T 3rjd_A 136 LKTNISHNGTYHCSGMGKHRYTS--AGISVTVKEL---FPAPVLNASVTSPLLEGNLVTLSCETKLLLQRPGLQLYFSFY 210 (262)
T ss_dssp SSCCGGGCEEEEEEEESSSEEEE--ECEEEEEECS---SCCCEEEESSCSSEETTCCEEEEEECCCCCC-----EEEEEE
T ss_pred EECChhhCEEEEEEEeCCCCccc--cceEEEeccC---CCCCeEeecCceeecCCCeEEEEeEcccCCCCCCccEEEEEE
Confidence 99999999999999999875432 2222222211 011122221 223466788887654432 22 2222
Q ss_pred E----EEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771 329 H----HRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE 362 (904)
Q Consensus 329 ~----~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~ 362 (904)
. .........+.|..+.....-.+.+.+.|..|.
T Consensus 211 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~ 248 (262)
T 3rjd_A 211 MGSKTLRGRNTSSEYQILTARREDSGLYWCEAATEDGN 248 (262)
T ss_dssp ETTEEEEEEESCCEEEESSCCGGGCEEEEEEEEETTSS
T ss_pred eCCcEecccCCCceEEEEEechhhCeEEEEEEEcccCc
Confidence 1 111122336788888888888888999988775
No 307
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.23 E-value=8.4e-11 Score=115.06 Aligned_cols=156 Identities=14% Similarity=0.199 Sum_probs=106.9
Q ss_pred eEEecCCCeEEEEEEccCC----CCeEEEeeCC---------------ccccCC-----CCceee-------cceEEEEe
Q psy8771 115 LEVMLDSPLNLSCVAVGSP----MPFVKWRKGQ---------------NIELTP-----DDKLPV-------GRNVLTLD 163 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p----~p~i~W~k~~---------------~~~~~~-----~~~~~~-------~~~~l~i~ 163 (904)
+.+.+|+++.|.|.+.+.| .+.|.|++++ +..+.. ..|+.. ++.+|.|.
T Consensus 10 v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~ 89 (214)
T 3jz7_A 10 IEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVT 89 (214)
T ss_dssp EEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEEC
T ss_pred EEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEc
Confidence 8999999999999999988 4699999841 222221 234443 35689999
Q ss_pred ee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEE-EeecCCeEEEEEeC-CCccceEEEEEEEeCC
Q psy8771 164 RV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKI-SEVTATSVRLDWTY-PSETLLYYVIQYKPKA 239 (904)
Q Consensus 164 ~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~-~~~~~~sv~l~W~~-~~~~~~~y~v~~~~~~ 239 (904)
++ +|+|.|+|.|.|..|..+....|.|. ..|..+....- .......++|.+.. .+.+... +.|...+
T Consensus 90 ~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~-------~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~--v~W~~~~ 160 (214)
T 3jz7_A 90 NLQLSDIGTYQCKVKKAPGVANKKFLLTVL-------VKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQ--FEWQKLS 160 (214)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEE-------CCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCE--EEEEECS
T ss_pred cCChhhCeEEEEEEEeCCCccccEEEEEEE-------cCCCCceeeeecceecCCcEEEEecCCCCCCCCE--EEEEECC
Confidence 99 69999999999999988888889988 44443332211 12234568888887 3333333 4454432
Q ss_pred CCCCeE--EeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 240 ANTPYS--EISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 240 ~~~~~~--~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
...... .........+.|.++...+.+.|+|.|.|..|..
T Consensus 161 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~ 202 (214)
T 3jz7_A 161 DSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSD 202 (214)
T ss_dssp TTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred CCCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcE
Confidence 222111 1112234589999999999999999999998864
No 308
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.23 E-value=5e-11 Score=97.69 Aligned_cols=83 Identities=13% Similarity=0.165 Sum_probs=69.2
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a 175 (904)
..+|.|..++.+ +.+.+|+.++|.|.+.+. .+.|.|+|+ |..+..+.++.+. ...|.|.++ +|+|.|+|.|
T Consensus 3 ~~~~~~~~~~~~-~~v~~G~~v~l~C~v~~~-~~~v~W~k~-g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a 79 (93)
T 1waa_A 3 MALIEVEKPLYG-VEVFVGETAHFEIELSEP-DVHGQWKLK-GQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQA 79 (93)
T ss_dssp CCCCCEEECCCC-EEEETTSCEEEEEEESSS-SCCCEEEET-TEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCcEeeccCcc-eEEeCCCCEEEEEEECCC-CCeEEEEEC-CEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEE
Confidence 457889999999 999999999999999874 478999999 7788777776642 247999999 7999999999
Q ss_pred EecCcceEEEEEEEEE
Q psy8771 176 ASVLGVIETSTIVKVQ 191 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~ 191 (904)
.|. ..++.|.|.
T Consensus 80 ~n~----~~sa~L~V~ 91 (93)
T 1waa_A 80 ANT----KSAANLKVK 91 (93)
T ss_dssp TTE----EEEEEEEEE
T ss_pred CCC----cEEEEEEEE
Confidence 874 467788876
No 309
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.23 E-value=9.9e-11 Score=122.33 Aligned_cols=204 Identities=12% Similarity=0.081 Sum_probs=115.6
Q ss_pred eecccccccccceEEEEeeeccCCeee-eeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEc-cCCCCeEEEee
Q psy8771 64 ITHPPTRAARSHARLAAQSVLRRGRLA-HAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRK 141 (904)
Q Consensus 64 i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~k 141 (904)
++...+...|...+.|.......|... .+.+. +..+|.+...+.. ..+..|+.+.|.|.+. |.|.+.|.|++
T Consensus 81 L~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~-----v~~~P~~~~~~~~-~~~~~~~~~~~~C~~~~~~P~~~i~W~~ 154 (313)
T 4fqp_A 81 LRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLR-----VLAKPQNTAEVQK-VQLTGEPVPMARCVSTGGRPPAQITWHS 154 (313)
T ss_dssp EEECSCCGGGCEEEEEEEECSSSCEEEEEEEEC-----CBBCCEEEEEECC-BCCCSSCEEEEEEEEEEEBSCCEEEEEE
T ss_pred EEECcCChhhCEEEEEEEeeccCcceeeeeeee-----eccCCcceecccc-eEeecCceEEEEEEccCccCCcEEEeec
Confidence 444444445555555544444444332 33333 3456777666666 7778899999999876 78999999999
Q ss_pred CCccccCCCCceee-c------ceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEee
Q psy8771 142 GQNIELTPDDKLPV-G------RNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEV 212 (904)
Q Consensus 142 ~~~~~~~~~~~~~~-~------~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~ 212 (904)
+ +..+....+... . ...|.|... +|+|.|+|.|.|..+.......+.+...++|..... ++....+ .
T Consensus 155 ~-~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~-~~~~~~~--~ 230 (313)
T 4fqp_A 155 D-LGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSIS-GYDNNWY--L 230 (313)
T ss_dssp T-TCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEE-CCCSCEE--T
T ss_pred C-CccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccc-cccceee--c
Confidence 9 554433322221 1 234777766 589999999999877654444333322122211111 1111111 2
Q ss_pred cCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 213 TATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 213 ~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
....++|.+...+.+.. ..|.|...+...... .......|.|.++...+.+.|+|.|.|..|...
T Consensus 231 ~g~~v~l~C~~~g~P~p-~~v~W~~~~~~l~~~--~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~ 295 (313)
T 4fqp_A 231 GQNEATLTCDARSNPEP-TGYNWSTTMGPLPPF--AVAQGAQLLIRPVDKPINTTLICNVTNALGARQ 295 (313)
T ss_dssp TCCCEEEEEEEEEESCC-CEEEEEETTBSCCTT--EEEETTEEEECCCSSCCEEEEEEEEECSSCEEE
T ss_pred CCCeEEEEEEecCCCCC-cEEEEEECCEECCCc--eEEeCCEEEECcCChhhCEEEEEEEEeCCCcEE
Confidence 23445555554322111 124444433221111 112235799999999999999999999999754
No 310
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.23 E-value=1.3e-10 Score=111.86 Aligned_cols=148 Identities=16% Similarity=0.251 Sum_probs=103.0
Q ss_pred CCCCcEEEec-cCCceEEEEeCCCCC---C--------------------CceecccccccccceEEEEeeeccCCeeee
Q psy8771 36 APRDVQVRPL-SSSTMVIQWDEPETP---N--------------------GQITHPPTRAARSHARLAAQSVLRRGRLAH 91 (904)
Q Consensus 36 ~p~~l~~~~~-~~~s~~v~W~~~~~~---~--------------------g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~ 91 (904)
....|.|... +.+.+.|.|.+.... + +.+........+.....|...+........
T Consensus 18 ~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~ 97 (195)
T 2c5d_C 18 LTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQTFVSQ 97 (195)
T ss_dssp CCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTEEEECC
T ss_pred CcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCCceecc
Confidence 5566667666 677788999764211 0 122223333334444445444432222222
Q ss_pred -eeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeecceEEEEeeecCCe
Q psy8771 92 -AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESE 169 (904)
Q Consensus 92 -~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l~d~g 169 (904)
+.+.+ ..+|.|...|.+ ..+.+|+.+.|.|.+.|.|.| .|.|+|+ +..+....+. ...+.|.|.+++|+|
T Consensus 98 ~~~l~V-----~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~~v~W~~~-~~~~~~~~~~-~~~~~L~i~~~~d~G 169 (195)
T 2c5d_C 98 PGYVGL-----EGLPYFLEEPED-RTVAANTPFNLSCQAQGPPEPVDLLWLQD-AVPLATAPGH-GPQRSLHVPGLNKTS 169 (195)
T ss_dssp CEEEEE-----CCSCEEEECCCC-EEECTTCCEEEEEEEECSSCCCEEEEEES-SCBSSSSTTS-SCCEEEEECCCSSCE
T ss_pred cEEEEE-----ecCCeEEcCCCc-EEEcCCCEEEEEeECCCCCCCCEEEEEEC-CEeccCCCCc-CCCCeEEEcccccCc
Confidence 34443 567899888888 999999999999999999999 9999999 6666554433 567899999999999
Q ss_pred EEEEEEEecCcceE-EEEEEEEE
Q psy8771 170 NYTCIAASVLGVIE-TSTIVKVQ 191 (904)
Q Consensus 170 ~Y~c~a~n~~g~~~-~~~~l~v~ 191 (904)
.|+|.|.|..|... ..+.|.|.
T Consensus 170 ~Y~C~a~N~~g~~~s~~~~l~V~ 192 (195)
T 2c5d_C 170 SFSCEAHNAKGVTTSRTATITVL 192 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEEC
T ss_pred eEEEEEEcCCCceEEEEEEEEEe
Confidence 99999999999875 67777763
No 311
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.23 E-value=1.1e-11 Score=119.23 Aligned_cols=110 Identities=14% Similarity=0.133 Sum_probs=73.1
Q ss_pred ccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC
Q psy8771 69 TRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT 148 (904)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~ 148 (904)
....|.....|...+..+.....+.+.| ..||.+...+.+ ..+.+|+.++|.|.+.|.|.|.|+|+++++....
T Consensus 76 v~~~D~G~Y~C~a~n~~g~~~~~~~l~V-----~~p~~~~~~~~~-~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~ 149 (203)
T 4fa8_A 76 ANISHDGNYLCRMKLGETEVTKQEHLSV-----VKPLTLSVHSER-SQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPA 149 (203)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEE-----EEEEEEEEEEEE-CCSSCSCCEEEEEEEEEESCCEEEECCC------
T ss_pred CCHHHCeEEEEEEEcCCCcEEEEEEEEe-----cCCceeeeccee-EEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecC
Confidence 3444545555554443333334445554 457778777777 8889999999999999999999999987444322
Q ss_pred ---CCCceee-cceEEEE---eee--cCCeEEEEEEEecCcceEE
Q psy8771 149 ---PDDKLPV-GRNVLTL---DRV--TESENYTCIAASVLGVIET 184 (904)
Q Consensus 149 ---~~~~~~~-~~~~l~i---~~l--~d~g~Y~c~a~n~~g~~~~ 184 (904)
.+.|+.+ .+++|.| .++ +|+|.|+|.|.|..|+.+.
T Consensus 150 ~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 150 PTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp ------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred cccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 2345543 4555544 566 6999999999999998765
No 312
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.23 E-value=2.7e-10 Score=119.86 Aligned_cols=185 Identities=15% Similarity=0.093 Sum_probs=118.5
Q ss_pred Ccceeeeccce----EE-EEecCCCCCcce-eeEeeCCCCCCCCcEEEeccCC-ceEEEEeCCCCC-----------CCc
Q psy8771 2 DTRCYVESPEE----VF-IILCPLPPLIPG-YILVTEPGTAPRDVQVRPLSSS-TMVIQWDEPETP-----------NGQ 63 (904)
Q Consensus 2 ~~~~~~~~~~~----~~-~~~~~~~p~~~~-~~~~~~p~~~p~~l~~~~~~~~-s~~v~W~~~~~~-----------~g~ 63 (904)
.|+|.+.+..+ .. ..+...+|.+.. ........+....|.|...+.+ .+.|.|.+.... ++.
T Consensus 104 ~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~~~~ 183 (329)
T 3oq3_B 104 RYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQSGQN 183 (329)
T ss_dssp CEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEETTE
T ss_pred cEEEEEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecCCCE
Confidence 58999999772 11 123334454422 2222233346677777777877 899999875311 233
Q ss_pred eecccccccccceEEEEeeec--cCCeeee----eeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCC---C
Q psy8771 64 ITHPPTRAARSHARLAAQSVL--RRGRLAH----AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSP---M 134 (904)
Q Consensus 64 i~~~~~~~~~~~~~~~~~~~~--~~g~~~~----~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p---~ 134 (904)
+........|.....|...+. .++.... +.+.+........|.+ .|.. ..+.+|+.++|.|.+.|.| .
T Consensus 184 L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~--~~~~-~~v~~G~~~~l~C~~~g~p~~~~ 260 (329)
T 3oq3_B 184 LIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI--LDPK-INVTIGEPANITCTAVSTSLLVD 260 (329)
T ss_dssp EEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE--CCSE-EEECTTSCEEEEEEEEETTCCTT
T ss_pred EEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee--cCCe-eEEecCCCEEEEEEEEECCCCCC
Confidence 333344445555566666654 4444333 3444432211111333 5555 8999999999999999998 7
Q ss_pred C-eEEEeeCCccc-cCCCCceee--------cceEEEEeee--cCCe-EEEEEEEecCcceEEEEEEEE
Q psy8771 135 P-FVKWRKGQNIE-LTPDDKLPV--------GRNVLTLDRV--TESE-NYTCIAASVLGVIETSTIVKV 190 (904)
Q Consensus 135 p-~i~W~k~~~~~-~~~~~~~~~--------~~~~l~i~~l--~d~g-~Y~c~a~n~~g~~~~~~~l~v 190 (904)
| .|.|+|+ +.. +..+.+... ..+.|.|.++ +|+| .|+|.|.|..|.....+.|.|
T Consensus 261 ~i~v~W~~~-g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 261 DVLIDWENP-SGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp CCEEEEECT-TSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred CcEEEEEEC-CeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 7 8999999 554 444433221 4678999999 6999 999999999999888888776
No 313
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.23 E-value=4.5e-11 Score=126.67 Aligned_cols=164 Identities=16% Similarity=0.064 Sum_probs=115.0
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEc-------cCCCCeEEEeeCCccc--cCC--CCceeecceEEEEeee--cCC
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAV-------GSPMPFVKWRKGQNIE--LTP--DDKLPVGRNVLTLDRV--TES 168 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~-------g~p~p~i~W~k~~~~~--~~~--~~~~~~~~~~l~i~~l--~d~ 168 (904)
...|.|...|.+ +.+.+|+++.|.|.+. |.|.+.|.|+|+ +.. +.. ..++...++.|.|.++ +|+
T Consensus 16 ~~~p~~~~~~~~-~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~ 93 (339)
T 3o4o_C 16 RSCRFRGRHYKR-EFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKN-DSARTVPGEEETRMWAQDGALWLLPALQEDS 93 (339)
T ss_dssp --CEEEEECSCC-EEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEES-SCCSCCSCCSSSCEEEETTEEEESSBCTTCC
T ss_pred hhhHhhCcCceE-EEEECCccEEEEeccccccccccCCCCceEEEEEC-CCCcccCccccccEEeeCCeEEECCCCcccC
Confidence 456889888888 9999999999999998 999999999999 444 332 3456667889999999 699
Q ss_pred eEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCC---cceEEEeecCCeEEEEEe-----CCCccceEEEEEEEeCCC
Q psy8771 169 ENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAP---LDVKISEVTATSVRLDWT-----YPSETLLYYVIQYKPKAA 240 (904)
Q Consensus 169 g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p---~~l~~~~~~~~sv~l~W~-----~~~~~~~~y~v~~~~~~~ 240 (904)
|.|+|.|.|..|.....+.|.|. ..|..+ ............+.|.+. ..+.+.. .+.|...+.
T Consensus 94 G~Y~C~~~n~~g~~~~~~~l~V~-------~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~--~v~W~k~g~ 164 (339)
T 3o4o_C 94 GTYVCTTRNASYCDKMSIELRVF-------ENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDV--KIQWYKDSL 164 (339)
T ss_dssp EEEECCEEETTEEEEEEEEEEEE-------CSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCC--CBCCEESSC
T ss_pred EEEEEEEECCcceEEEEEEEEEE-------cCCCccccccccceEEECCCCEEEEecCCcccccCCCCc--eEEEecCCe
Confidence 99999999999988888888888 332211 011112234567788887 3322222 233333221
Q ss_pred C-----CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771 241 N-----TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278 (904)
Q Consensus 241 ~-----~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~ 278 (904)
. ..+... .....+.|.++...+.+.|+|.|.|..|.
T Consensus 165 ~~~~~~~~~~~~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 205 (339)
T 3o4o_C 165 LLDKDNEKFLSV--RGTTHLLVHDVALEDAGYYRCVLTFAHEG 205 (339)
T ss_dssp BCCTTCSSEEEC--TTSSEEEESSCCGGGCEEEEEEEECCBTT
T ss_pred eCCCCCceeEEc--CCcceEEEcccCHhhCeEEEEEEEECCCC
Confidence 1 111111 12257999999999999999999998874
No 314
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.23 E-value=3.8e-11 Score=116.01 Aligned_cols=164 Identities=13% Similarity=0.156 Sum_probs=107.7
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCe-EEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEec
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASV 178 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~ 178 (904)
...|.|...|.+ ..+.+|++++|.|.+.|.|.+. |.|+|+ +..+.. ..+.|.|.++ +|+|.|+|.|.|
T Consensus 5 ~p~p~i~~~p~~-~~v~~G~~v~L~C~~~~~p~~~~v~W~k~-g~~l~~------~~~~L~i~~v~~~D~G~Y~C~a~n- 75 (204)
T 3sgj_C 5 LPKAVVFLEPQW-YRVLEKDSVTLKCQGAYSPEDQSTQWFHN-ESLISS------QASSYFIDAATVDDSGEYRCQTQL- 75 (204)
T ss_dssp -CBCEEEEESCC-SEEETTCCEEEEEECCSSSSCCCEEEEET-TEEESC------CSSEEEESSCCGGGCEEEEEEETT-
T ss_pred CCCCeEEEcCCC-eEEECCCCEEEEEcCCCCCCCcEEEEEEC-CEEccc------CccEEEEecccccCCEEEEEEeCC-
Confidence 345678777877 8999999999999999999876 999999 655543 2378999999 699999999987
Q ss_pred CcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCc-cceEEEEEEEeCCCCCCeEEeecceeceEEE
Q psy8771 179 LGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE-TLLYYVIQYKPKAANTPYSEISGIITTYYTV 257 (904)
Q Consensus 179 ~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~-~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i 257 (904)
+..+....|.|.. .+... ..|. ..+. ....++|.+..... +.. .+.|..++. ... .......+.|
T Consensus 76 -~~~s~~~~l~V~~--~p~~~--~~~~-~~v~--~G~~v~L~C~~~~~~p~~--~v~W~k~g~--~~~--~~~~~~~L~i 141 (204)
T 3sgj_C 76 -STLSDPVQLEVHI--GWLLL--QAPR-WVFK--EEDPIHLRCHSWKNTALH--KVTYLQNGK--GRK--YFHHNSDFYI 141 (204)
T ss_dssp -SBCCCCEEEEEEC--SSEEE--ECSC-SEEE--TTCCEEEEEEEGGGCCCE--EEEEEETTE--EEE--EEEECCCEEE
T ss_pred -CcccccEEEEEec--CceEe--cCCc-eeEe--CCCcEEEEEEecCCCCCc--eEEEEECCc--Eee--cccCCceEEE
Confidence 3445566777761 11111 1121 2232 34567777765422 222 344544321 111 1223467999
Q ss_pred cCCCCCCeEEEEEEEEcCCCCCCCCCCeEEec
Q psy8771 258 RNLSPYTEYEFYIIAVNNLGRGPPSSPAVITT 289 (904)
Q Consensus 258 ~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t 289 (904)
.++...+.+.|+|.|.|..+. ..+..+.+..
T Consensus 142 ~~v~~~D~G~Y~C~a~n~~~~-~~s~~~~l~V 172 (204)
T 3sgj_C 142 PKATLKDSGSYFCRGLVGSKN-VSSETVQITI 172 (204)
T ss_dssp SSCCGGGCEEEEEEEEETTEE-EECCCEEEEE
T ss_pred CcCCcccCEEEEEEEEeCCCc-eecCcEEEEE
Confidence 999999999999999995442 2344444433
No 315
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=2.8e-11 Score=103.54 Aligned_cols=100 Identities=21% Similarity=0.353 Sum_probs=76.8
Q ss_pred CCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEe-c-CcceEEecCCCCCceEEEE
Q psy8771 714 YVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTL-K-NQTSFVLDELKKWTEYRIW 791 (904)
Q Consensus 714 ~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~-~-~~~~~~i~~L~p~t~Y~~~ 791 (904)
.+|. +|.++++...+.+++.|+|++|.. ..++.+.+|.|+|+..+...+ ..... . ..+.+++.+|.+++.|.|+
T Consensus 6 ~~P~-~P~~l~~~~~~~~sv~l~W~~p~~-~g~~~i~~Y~v~~~~~~~~~w--~~~~~~~~~~~~~~v~~L~p~t~Y~fr 81 (110)
T 2yuw_A 6 SGTS-PPTLLTVDSVTDTTVTMRWRPPDH-IGAAGLDGYVLEYCFEGTEDW--IVANKDLIDKTKFTITGLPTDAKIFVR 81 (110)
T ss_dssp CCSC-CCEEEEEEEECSSCEEEEEECCSS-CCSSCEEEEEEEEEETTCSSE--EECCSSCCCSSEEEECSCCTTCEEEEE
T ss_pred CCCC-CCCccEEEeccCCeEEEEECCCCC-CCCCCccEEEEEEEECCCccc--eEeccccCccCEEEECCCCCCCEEEEE
Confidence 3444 688999999999999999999852 234579999999998765433 11111 2 6789999999999999999
Q ss_pred EEEeeCCCCCCCCCcE-EeecCCCCCC
Q psy8771 792 VLAGTSIGDGPSSYPI-TIRTHEDDPS 817 (904)
Q Consensus 792 V~a~~~~g~g~~s~~~-~~~t~~~~P~ 817 (904)
|+|.|..|.|.+|... .+++.+..|+
T Consensus 82 V~A~n~~G~s~~S~~~~~v~~~~~~P~ 108 (110)
T 2yuw_A 82 VKAVNAAGASEPKYYSQPILVKESGPS 108 (110)
T ss_dssp EEEEETTEECCCEECSSCEECCCCCCC
T ss_pred EEEEcCCcCCCCcCCCCCEEecCCCCC
Confidence 9999999999888654 3556666664
No 316
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.22 E-value=1.2e-10 Score=97.11 Aligned_cols=83 Identities=14% Similarity=0.162 Sum_probs=70.8
Q ss_pred EEcCCCCceEEecCCCeEEEEEEccC-CCCeEEEeeCCccccCCCCceee--cce--EEEEeee--cCCeEEEEEEEecC
Q psy8771 107 FSIPPPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIELTPDDKLPV--GRN--VLTLDRV--TESENYTCIAASVL 179 (904)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~~~~~~~~--~~~--~l~i~~l--~d~g~Y~c~a~n~~ 179 (904)
+..+|.+ +.+.+|+.+.|.|.+.|. |.|.|.|+|+ +..+....++.+ .++ .|.|.++ +|+|.|+|.|.|..
T Consensus 4 v~~~~~~-~~v~~G~~v~l~C~~~g~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (97)
T 2bk8_A 4 VSGQIMH-AVGEEGGHVKYVCKIENYDQSTQVTWYFG-VRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDY 81 (97)
T ss_dssp EECCCCC-EEECTTCCEEEEEEEESCCTTCEEEEEET-TEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred eeccCcC-EEEcCCCcEEEEEEEeccCCCCEEEEEEC-CEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCC
Confidence 4455666 999999999999999997 9999999999 777776666654 333 8999999 69999999999999
Q ss_pred cceEEEEEEEEE
Q psy8771 180 GVIETSTIVKVQ 191 (904)
Q Consensus 180 g~~~~~~~l~v~ 191 (904)
|.....+.|.|.
T Consensus 82 g~~~~~~~l~V~ 93 (97)
T 2bk8_A 82 GEDSSYAELFVK 93 (97)
T ss_dssp CEEEEEEEEEET
T ss_pred CeEeEEEEEEEE
Confidence 999998888886
No 317
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=8.2e-11 Score=100.61 Aligned_cols=98 Identities=17% Similarity=0.331 Sum_probs=77.9
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEee--cCceEEEEcCCCCCCeEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVV--DNNQLTTISDLTPHTIYTIRV 556 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V 556 (904)
.+|.+|.++++...+.+++.|+|.+|...++ .+.+|.|+|+.... ..|..... ...+.+.+.+|.+++.|.|+|
T Consensus 6 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~g~~~i~~Y~v~~~~~~~---~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV 82 (110)
T 2yuw_A 6 SGTSPPTLLTVDSVTDTTVTMRWRPPDHIGAAGLDGYVLEYCFEGT---EDWIVANKDLIDKTKFTITGLPTDAKIFVRV 82 (110)
T ss_dssp CCSCCCEEEEEEEECSSCEEEEEECCSSCCSSCEEEEEEEEEETTC---SSEEECCSSCCCSSEEEECSCCTTCEEEEEE
T ss_pred CCCCCCCccEEEeccCCeEEEEECCCCCCCCCCccEEEEEEEECCC---ccceEeccccCccCEEEECCCCCCCEEEEEE
Confidence 4568899999999999999999999876544 79999999998753 45655433 367789999999999999999
Q ss_pred EEEeCCCCCCCCCcE-EEecCCCCC
Q psy8771 557 QAFTSVGPGPLSAPV-LVKTQQGVP 580 (904)
Q Consensus 557 ~a~~~~g~~~~S~~~-~~~t~~~~p 580 (904)
+|+|..|.|.+|... .+++....|
T Consensus 83 ~A~n~~G~s~~S~~~~~v~~~~~~P 107 (110)
T 2yuw_A 83 KAVNAAGASEPKYYSQPILVKESGP 107 (110)
T ss_dssp EEEETTEECCCEECSSCEECCCCCC
T ss_pred EEEcCCcCCCCcCCCCCEEecCCCC
Confidence 999999998887664 344444343
No 318
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.21 E-value=1.2e-10 Score=111.61 Aligned_cols=162 Identities=15% Similarity=0.199 Sum_probs=106.0
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEee-CCccccC-CCCceee-----cceEEEEeee--cCCeEEEE
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRK-GQNIELT-PDDKLPV-----GRNVLTLDRV--TESENYTC 173 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k-~~~~~~~-~~~~~~~-----~~~~l~i~~l--~d~g~Y~c 173 (904)
|+.|...|.+ +.+.+|+.+.|.|.+.|.| .+.|.|++ + +..+. ...++.. ....|.|.++ +|+|.|+|
T Consensus 2 p~~v~~~p~~-~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~-g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 79 (191)
T 1epf_A 2 VLQVDIVPSQ-GEISVGESKFFLCQVAGDAKDKDISWFSPN-GEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKC 79 (191)
T ss_dssp -CCEEEESSS-EEEETTCCEEEEEEECCCSCCCEEEEECTT-SCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred ceEEEecCCC-cEEcCCCCEEEEEECCCCCCCceEEEEeCC-CccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEE
Confidence 4567777877 9999999999999999987 78999999 6 65554 4455543 3578999999 69999999
Q ss_pred EEEecC-cceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC------CCeEE
Q psy8771 174 IAASVL-GVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN------TPYSE 246 (904)
Q Consensus 174 ~a~n~~-g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~------~~~~~ 246 (904)
.+.|.. +..+..+.|.|. ..+... ..|....+. ....+.|.+...+.+... +.|...+.. ..+..
T Consensus 80 ~~~~~~~~~~~~~~~l~v~--~~p~~~--~~~~~~~~~--~g~~~~l~C~~~g~p~~~--v~W~~~~~~~~~~~~~~~~~ 151 (191)
T 1epf_A 80 VVTAEDGTQSEATVNVKIF--QKLMFK--NAPTPQEFK--EGEDAVIVCDVVSSLPPT--IIWKHKGRDVILKKDVRFIV 151 (191)
T ss_dssp EEEETTTEEEEEEEEEEEE--CCSEEE--ECCSSEECC--TTSCEEECCEEECSSCCE--EEEEETTEEGGGGCCTTEEE
T ss_pred EEEcCCCcceEEEEEEEee--cCceEe--cCCCcEeec--CCCeEEEEEEECCCCCCE--EEEEECCEEeeccCCceEEE
Confidence 999998 456666666666 111111 123333332 233444555433222222 444433211 11111
Q ss_pred eecceeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771 247 ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278 (904)
Q Consensus 247 ~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~ 278 (904)
. ....+.|.++...+.+.|+|.|.|..|.
T Consensus 152 ~---~~~~L~i~~~~~~d~G~Y~C~a~n~~~~ 180 (191)
T 1epf_A 152 L---SNNYLQIRGIKKTDEGTYRCEGRILARG 180 (191)
T ss_dssp C---TTSCEEETTCCGGGCEEEEEEEEEGGGT
T ss_pred e---cCCeEEECCCChhhCEEEEEEEEEecce
Confidence 1 1246999999999999999999998753
No 319
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.21 E-value=3e-10 Score=118.59 Aligned_cols=88 Identities=22% Similarity=0.252 Sum_probs=73.1
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS 177 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n 177 (904)
+..+|.|...+.....+..|+.++|.|.+.|.|.| .|+|+|+ +..+... ....+++|.|.++ +|+|.|+|.|.|
T Consensus 213 V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~-~~~l~~~--~~~~~~~L~i~~v~~~d~G~Y~C~a~N 289 (313)
T 4fqp_A 213 VYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTT-MGPLPPF--AVAQGAQLLIRPVDKPINTTLICNVTN 289 (313)
T ss_dssp BCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEET-TBSCCTT--EEEETTEEEECCCSSCCEEEEEEEEEC
T ss_pred cccCCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEEC-CEECCCc--eEEeCCEEEECcCChhhCEEEEEEEEe
Confidence 35678876555444778889999999999999999 6999999 6666543 3345678999999 699999999999
Q ss_pred cCcceEEEEEEEEE
Q psy8771 178 VLGVIETSTIVKVQ 191 (904)
Q Consensus 178 ~~g~~~~~~~l~v~ 191 (904)
..|..+.++.|.|.
T Consensus 290 ~~G~~~~~~~l~V~ 303 (313)
T 4fqp_A 290 ALGARQAELTVQVK 303 (313)
T ss_dssp SSCEEEEEEEEEEE
T ss_pred CCCcEEEEEEEEEE
Confidence 99999999999998
No 320
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.21 E-value=1.8e-09 Score=121.77 Aligned_cols=235 Identities=11% Similarity=0.102 Sum_probs=123.9
Q ss_pred CCCCcEEEeccCCc--eEEEEeCCCCC--------------CCc------eecccccccccceEEEEeeeccCCeeeeee
Q psy8771 36 APRDVQVRPLSSST--MVIQWDEPETP--------------NGQ------ITHPPTRAARSHARLAAQSVLRRGRLAHAV 93 (904)
Q Consensus 36 ~p~~l~~~~~~~~s--~~v~W~~~~~~--------------~g~------i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 93 (904)
....|.|...+.+. ++|+|.+.... +|. +........+.....|...+........+.
T Consensus 130 ~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~ 209 (523)
T 2rcj_C 130 NKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVA 209 (523)
T ss_pred CceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCccccccee
Confidence 45566776665543 59999875321 111 111112222334444444443332222222
Q ss_pred eeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccC-CCC-eEEEeeCCccccCC--CCceeec------ceEEEEe
Q psy8771 94 RQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGS-PMP-FVKWRKGQNIELTP--DDKLPVG------RNVLTLD 163 (904)
Q Consensus 94 ~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p-~i~W~k~~~~~~~~--~~~~~~~------~~~l~i~ 163 (904)
+.+. .....+|.+...+.. ..+.+|+.+.|.|.+.|. |.| .|+|+|+ +..+.. ..++... ...|.|.
T Consensus 210 ~~~~-~~~~~~P~v~~~~~~-~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~-g~~~~~~~~~~~~~~~g~~~~~s~L~i~ 286 (523)
T 2rcj_C 210 PTEC-SASTKGPSVFPLAPS-SKSTSGGTAALGCLVKDYFPQPVTVSWNSG-ALTSGVHTFPAVLQSSGLYSLSSVVTVP 286 (523)
T ss_pred eeec-CCCCcCCEEEecCCC-cccccCCceEEEEEEeceeCCCeEEEEecC-CcccceEeCCcEecCCCcEEEEEEEEec
Confidence 2111 123567777644433 566899999999999997 888 8999999 544321 1112111 3479998
Q ss_pred ee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceE-EEeecCCeEEEEEeCCCccc--eEEEEEEEeC
Q psy8771 164 RV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVK-ISEVTATSVRLDWTYPSETL--LYYVIQYKPK 238 (904)
Q Consensus 164 ~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~-~~~~~~~sv~l~W~~~~~~~--~~y~v~~~~~ 238 (904)
++ +| |.|+|.|.|..|.......|.+... |.... .+|.... +.. ...+.|.+...+.+. ....|.|...
T Consensus 287 ~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~--P~~~~-~~p~~~~~v~~--g~~~~l~C~~~g~~p~~~~~~v~W~k~ 360 (523)
T 2rcj_C 287 SSSLGT-QTYICNVNHKPSNTKVDKRVEPLSL--PSVFL-FPPKPKDTLMI--SRTPEVTCVVVDVSHEDPQVKFNWYVD 360 (523)
T ss_pred hhhcCC-ceEEEEEEeCCCCcceEEecCCCcC--ceEEe-cCCCchhhccc--CCceEEEEEEecccCCCCceEEEEEEC
Confidence 88 57 9999999999998776666655411 11000 1111111 111 223334443321110 0123444332
Q ss_pred CCCC----Ce--EEeec---ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 239 AANT----PY--SEISG---IITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 239 ~~~~----~~--~~~~~---~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
+... .. ..... .....+.|..+...+.+.|+|.|.|..+..
T Consensus 361 g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 410 (523)
T 2rcj_C 361 GVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPA 410 (523)
T ss_pred CeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCC
Confidence 2110 00 00000 112457888888899999999999987654
No 321
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.21 E-value=7e-11 Score=101.22 Aligned_cols=98 Identities=22% Similarity=0.376 Sum_probs=77.9
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEee--cCceEEEEcCCCCCCeEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVV--DNNQLTTISDLTPHTIYTIRV 556 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V 556 (904)
.+|.+|.++++...+.+++.|+|.+|...++ .+.+|.|+|+.... ..|..... ...+.+.+.+|.+++.|.|+|
T Consensus 7 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~---~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV 83 (111)
T 1x5y_A 7 GPTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGS---EEWVPANKEPVERCGFTVKDLPTGARILFRV 83 (111)
T ss_dssp SCCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTC---CCCEESSSSCBSSSEEEEECCCTTCCEEEEE
T ss_pred CCCcCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCC---CceEEccccCCcccEEEECCCCCCCEEEEEE
Confidence 4568899999999999999999999876666 59999999988653 34554432 356789999999999999999
Q ss_pred EEEeCCCCCCCCCcE-EEecCCCCC
Q psy8771 557 QAFTSVGPGPLSAPV-LVKTQQGVP 580 (904)
Q Consensus 557 ~a~~~~g~~~~S~~~-~~~t~~~~p 580 (904)
+|+|..|.|.+|... .+++....|
T Consensus 84 ~A~n~~G~s~~S~~~~~v~~~~~~P 108 (111)
T 1x5y_A 84 VGVNIAGRSEPATLLQPVTIRESGP 108 (111)
T ss_dssp EEEETTEECCCCCCSSCBCCCCCCC
T ss_pred EEEcCCcCCCCccCCCCEEecCCCC
Confidence 999999999888765 344444333
No 322
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.21 E-value=8.4e-11 Score=98.80 Aligned_cols=92 Identities=15% Similarity=0.131 Sum_probs=74.0
Q ss_pred CCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771 198 LTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277 (904)
Q Consensus 198 ~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g 277 (904)
+.++.+|.+|++.+++.+++.|+|+++.+.+.+|+|.|....+............+++.|.+|.|+++|.|+|.|.|..|
T Consensus 5 t~p~~pP~~l~~~~vt~tsi~vsW~pp~~~i~~Y~I~y~~~~~~~~~~~~v~~~~t~~~l~~L~p~T~Y~v~V~A~~~~g 84 (108)
T 2ee3_A 5 SSGLAPPRHLGFSDVSHDAARVFWEGAPRPVRLVRVTYVSSEGGHSGQTEAPGNATSAMLGPLSSSTTYTVRVTCLYPGG 84 (108)
T ss_dssp CCCCCCSSCEEEESCCSSCEEEEESCCSSCCSEEEEEEEETTTCCBCCEEEETTCCEEEECSCCSSCEEEEEEEEECTTS
T ss_pred ccCCCCCceEEEEEccCCeEEEEeeCCCCCccEEEEEEEeCCCCceeEEEcCCCcCEEEcCCCCCCCEEEEEEEEEeCCC
Confidence 35678999999999999999999999988999999999876443222222234558899999999999999999999999
Q ss_pred CCCCCCCeEEecC
Q psy8771 278 RGPPSSPAVITTG 290 (904)
Q Consensus 278 ~s~~s~~~~~~t~ 290 (904)
.+.++.. .+.|.
T Consensus 85 ~s~p~~~-~~~T~ 96 (108)
T 2ee3_A 85 GSSTLTG-RVTTK 96 (108)
T ss_dssp CEEEEEE-EEECC
T ss_pred cCCCccC-EEEeC
Confidence 9876544 45554
No 323
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.20 E-value=5.3e-11 Score=100.44 Aligned_cols=94 Identities=15% Similarity=0.231 Sum_probs=74.9
Q ss_pred CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS 797 (904)
Q Consensus 719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~ 797 (904)
+|..+.+. .+.+++.|+|.++ ++.+.+|.+|.|+|+..+...+. ....++ ..+.++|.+|.|++.|.|+|.|.|.
T Consensus 11 pP~~~~~~-~~~~sv~L~W~p~--~dggsPI~~Y~I~yr~~~~~~w~-~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~N~ 86 (114)
T 2kbg_A 11 PPSIHGQP-SSGKSFKLSITKQ--DDGGAPILEYIVKYRSKDKEDQW-LEKKVQGNKDHIILEHLQWTMGYEVQITAANR 86 (114)
T ss_dssp SCCEECCB-CSTTCEEEEECCC--CCSSSCCSEEEEEEEESSCCSCC-EEEEEETTTCCEEECCCCTTCCEEEEEEEECT
T ss_pred CCcccccc-cCCCEEEEEEECC--CCCCCcccEEEEEEEeCCCCCcE-EeEEcCCCcCEEEEcCCCCCCEEEEEEEEEeC
Confidence 56555444 6899999999975 45677999999999998654442 334444 7788999999999999999999999
Q ss_pred CCCCCCCCcEEeecCCCCCC
Q psy8771 798 IGDGPSSYPITIRTHEDDPS 817 (904)
Q Consensus 798 ~g~g~~s~~~~~~t~~~~P~ 817 (904)
.|.|.+|. ..++|...+|.
T Consensus 87 ~G~s~pS~-~~~~T~~~~~~ 105 (114)
T 2kbg_A 87 LGYSEPTV-YEFSMPPKPNI 105 (114)
T ss_dssp TSCEEEEE-EEECCCCCCSS
T ss_pred CcCcCCcC-CEEEcCCCCce
Confidence 99999886 67888776663
No 324
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.19 E-value=2.2e-09 Score=112.13 Aligned_cols=233 Identities=11% Similarity=0.093 Sum_probs=131.4
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC----------CCceecccccccccceEEEEeeecc----CC-eeeeeeeeccCCC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP----------NGQITHPPTRAARSHARLAAQSVLR----RG-RLAHAVRQVADPV 100 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~----------~g~i~~~~~~~~~~~~~~~~~~~~~----~g-~~~~~~~~v~~~~ 100 (904)
.+..|.|...+. ...+.|.+.... ++.++...+...|...+.|...+.. .+ ....+.+.+..
T Consensus 39 ~~v~L~C~~~~~-~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~-- 115 (316)
T 3vh8_G 39 GHVTLRCHYRHR-FNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTG-- 115 (316)
T ss_dssp SCEEEEEEBTTB-CCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEEC--
T ss_pred CCEEEEEEccCC-CceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEec--
Confidence 556666666555 678899776432 3344444455555555555543321 11 12233444432
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc---ee--ecceEEEEeee--cCCeEEEE
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK---LP--VGRNVLTLDRV--TESENYTC 173 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~---~~--~~~~~l~i~~l--~d~g~Y~c 173 (904)
...+|.|...|.. . +.+|++++|.|.+.+ +.+.+.|+|+ +..+....+ .. ...+.|.|.++ +|+|.|+|
T Consensus 116 ~~~~p~~~~~~~~-~-v~~G~~v~L~C~~~~-~~~~~~w~k~-g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C 191 (316)
T 3vh8_G 116 NHRKPSLLAHPGP-L-VKSGERVILQCWSDI-MFEHFFLHKE-GISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRC 191 (316)
T ss_dssp SSCCCEEEEESCS-E-EETTCCEEEEEEESS-CCSEEEEEET-TCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEE
T ss_pred CCCCCeEEecCCC-c-cCCCCeEEEEEcCCC-CCcEEEEEEC-CCccccceeeeeecCCCceEEEEECCCChhhCceEEE
Confidence 2356778776664 4 889999999999954 5568999999 554432211 11 24568999998 69999999
Q ss_pred EEEecCcce-----EEEEEEEEEeecCCCCCCCCCCcceEEE----eecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe
Q psy8771 174 IAASVLGVI-----ETSTIVKVQCKYAPLLTLPVAPLDVKIS----EVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY 244 (904)
Q Consensus 174 ~a~n~~g~~-----~~~~~l~v~~~~~~~~~~P~~p~~l~~~----~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~ 244 (904)
.|.|..|.. +....|.|. ..+.+| .+.+. ......++|.+.... +... +.|...+.....
T Consensus 192 ~a~n~~g~~~~s~~s~~~~l~V~-------~~~~~p-~i~~~~~~~v~~G~~v~L~C~~~~-~~~~--~~W~k~g~~~~~ 260 (316)
T 3vh8_G 192 YGSVTHTPYQLSAPSDPLDIVVT-------GPYEKP-SLSAQPGPKVQAGESVTLSCSSRS-SYDM--YHLSREGGAHER 260 (316)
T ss_dssp EEECTTCTTBCCCCCCCEEEEEE-------CSSCCC-EEEEESCSCCCTTSCCEEEEEESS-CCSE--EEEEETTSSCCE
T ss_pred EEecCCCCccccCCCCCEEEEec-------CCCCCC-eEEeCCCCeecCCCcEEEEEECCC-CCcE--EEEEECCCcCCC
Confidence 999988752 445566666 333333 12221 112345566665542 2222 444444332222
Q ss_pred EE-----eecceeceEEEcCCCCCCeEEEEEEEEcCCCC---CCCCCCeEEe
Q psy8771 245 SE-----ISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR---GPPSSPAVIT 288 (904)
Q Consensus 245 ~~-----~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~---s~~s~~~~~~ 288 (904)
.. ..+.....+.|.++. +.+.|+|.|.|..+. +..|..+.+.
T Consensus 261 ~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~ 310 (316)
T 3vh8_G 261 RLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVS 310 (316)
T ss_dssp EEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC-
T ss_pred ceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEE
Confidence 11 112233679999999 899999999998764 3445555443
No 325
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.19 E-value=2e-10 Score=109.01 Aligned_cols=145 Identities=21% Similarity=0.349 Sum_probs=102.5
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC---C-------------CceecccccccccceEEEEeeeccCCee-eeeeeeccC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP---N-------------GQITHPPTRAARSHARLAAQSVLRRGRL-AHAVRQVAD 98 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~---~-------------g~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~v~~ 98 (904)
....|.|...+.+.+.+.|.+.... + +.+........+.....|...+...... ..+.+.+
T Consensus 18 ~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V-- 95 (182)
T 1rhf_A 18 QPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTV-- 95 (182)
T ss_dssp CCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEE--
T ss_pred CcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEE--
Confidence 5667777777778889999765211 1 1232333344444444455544322222 2344444
Q ss_pred CCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeecceEEEEeeecCCeEEEEEEEe
Q psy8771 99 PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAAS 177 (904)
Q Consensus 99 ~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l~d~g~Y~c~a~n 177 (904)
..+|.+...+.. ..+.+|+.+.|.|.+.|.|.| .|.|+++ +..+.... .....|.|.+++|+|.|+|.|.|
T Consensus 96 ---~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~~v~W~~~-~~~~~~~~---~~~~~L~i~~~~d~G~Y~C~a~N 167 (182)
T 1rhf_A 96 ---EGVPFFTVEPKD-LAVPPNAPFQLSCEAVGPPEPVTIVWWRG-TTKIGGPA---PSPSVLNVTGVTQSTMFSCEAHN 167 (182)
T ss_dssp ---ECSCEEEECCCC-EEECTTCCEEEEEEEECSSSCCEEEEEET-TEECSCSE---ESSEEEEECCCSSCEEEEEEEEE
T ss_pred ---ecCCeEEecCcc-eEecCCCEEEEEeEecCCCCCCEEEEEcC-CeECCCCC---CCceEEEEeccccCeEEEEEEEC
Confidence 467899888888 999999999999999999999 9999999 66554322 26789999999999999999999
Q ss_pred cCcceEE-EEEEEE
Q psy8771 178 VLGVIET-STIVKV 190 (904)
Q Consensus 178 ~~g~~~~-~~~l~v 190 (904)
..|...+ .+.|.|
T Consensus 168 ~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 168 LKGLASSRTATVHL 181 (182)
T ss_dssp TTEEEECCCEEEEE
T ss_pred CCCCcccceEEEEe
Confidence 9998753 777665
No 326
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.19 E-value=4.7e-11 Score=101.11 Aligned_cols=88 Identities=17% Similarity=0.198 Sum_probs=71.0
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEccC---CCCeEEEeeCCccccCC--CCceee----------cceEEEEeee--
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGS---PMPFVKWRKGQNIELTP--DDKLPV----------GRNVLTLDRV-- 165 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~---p~p~i~W~k~~~~~~~~--~~~~~~----------~~~~l~i~~l-- 165 (904)
..+.|+..|.+ +.+.+|++++|.|.+.|. |.|.|+|+|++-..+.. ..++.+ ...+|+|.++
T Consensus 11 ~~~~f~~~P~~-v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 89 (118)
T 2edn_A 11 PTGVFLKKPDS-VSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVL 89 (118)
T ss_dssp CSSSCSBCCCC-CEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCT
T ss_pred CcceEEECCCC-eEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCCh
Confidence 34568888888 999999999999999986 78999999983222221 233332 2578999999
Q ss_pred cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771 166 TESENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 166 ~d~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
+|+|.|+|.|.|..|..+..+.|.|.
T Consensus 90 ~D~G~Y~Cevsn~~g~~s~~~~L~V~ 115 (118)
T 2edn_A 90 GDRGYYRLEVKAKDTCDSCGFNIDVE 115 (118)
T ss_dssp TTCSCEEEEEECSSCEEEEEECCEEE
T ss_pred hhCEEEEEEEEEcCCcEEEEEEEEEE
Confidence 69999999999999999999999998
No 327
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.18 E-value=2.6e-10 Score=126.03 Aligned_cols=248 Identities=15% Similarity=0.114 Sum_probs=137.3
Q ss_pred cceeeeccceEEEEecC----CCCCcce-e-eEeeCCCCCCCCcEEEeccCCce---EEEEeCCCCC-----------CC
Q psy8771 3 TRCYVESPEEVFIILCP----LPPLIPG-Y-ILVTEPGTAPRDVQVRPLSSSTM---VIQWDEPETP-----------NG 62 (904)
Q Consensus 3 ~~~~~~~~~~~~~~~~~----~~p~~~~-~-~~~~~p~~~p~~l~~~~~~~~s~---~v~W~~~~~~-----------~g 62 (904)
|+|.+.+.......-.. .+|.+.. . .......+....|.|...+.+.. .|.|.+.... ++
T Consensus 63 Y~C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~~~~~~~~~~~ 142 (450)
T 1z7z_I 63 PMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPAVGEPAEV 142 (450)
T ss_dssp CEEEEEETTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEECCTTTEEE
T ss_pred eEEEEeCCCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeecccccccccce
Confidence 89999766543321111 2333211 0 00112223566777777776665 9999875211 12
Q ss_pred ceecccccccccceEEEEeeeccCC---ee-----eeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccC-C
Q psy8771 63 QITHPPTRAARSHARLAAQSVLRRG---RL-----AHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGS-P 133 (904)
Q Consensus 63 ~i~~~~~~~~~~~~~~~~~~~~~~g---~~-----~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p 133 (904)
.++....+..+.....|...+.... .. ....+.+... ...+|.+.. . ..+.+|+.+.|.|.+.|. |
T Consensus 143 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~-~~~~p~~~~---~-~~v~~G~~v~l~C~~~g~~P 217 (450)
T 1z7z_I 143 TTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVL-PATPPQLVS---P-RVLEVDTQGTVVCSLDGLFP 217 (450)
T ss_dssp EEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCC-CSSCCEEEC---C-SEEETTSEEEEEEEEESCTT
T ss_pred EEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeecc-CCCCCEecC---c-eeEEeCCcEEEEEEeeCCCC
Confidence 2333333334444444544433211 01 1122233221 134566543 2 678899999999999999 7
Q ss_pred --CCeEEEeeCCccccCCCCceeecceEEEEe---ee--cCCe--EEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCC
Q psy8771 134 --MPFVKWRKGQNIELTPDDKLPVGRNVLTLD---RV--TESE--NYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAP 204 (904)
Q Consensus 134 --~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~---~l--~d~g--~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p 204 (904)
.+.+.|+++ +..+.. ++......+.+. ++ +|+| .|+|.|.|..|..+..+.|.|. ..|. |
T Consensus 218 ~~~~~~~W~~~-~~~~~~--~~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~-------~~~~-p 286 (450)
T 1z7z_I 218 VSEAQVHLALG-DQRLNP--TVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIY-------SFPA-P 286 (450)
T ss_dssp GGGCEEEEEET-TEECCC--EEEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEE-------CCCC-C
T ss_pred CCceEEEEeCC-CEeCCc--eEEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEe-------cCCC-C
Confidence 789999999 666654 343322233332 44 7999 9999999999999889999988 3222 2
Q ss_pred cceEE---EeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771 205 LDVKI---SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277 (904)
Q Consensus 205 ~~l~~---~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g 277 (904)
. +.. .......++|.+...+ . -.+.| . +... ........+.|..+...+.+.|+|.|.|..+
T Consensus 287 ~-i~~~~~~v~~G~~v~l~C~~~p--~--p~i~W--~--g~~~--~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 351 (450)
T 1z7z_I 287 N-VILTKPEVSEGTEVTVKCEAHP--R--AKVTL--N--GVPA--QPLGPRAQLLLKATPEDNGRSFSCSATLEVA 351 (450)
T ss_dssp E-EEESCSEEETTCEEEEEEEC--------------------------CCCCCEEEECCGGGTTCEEEEEEEEEET
T ss_pred e-EecCCeeEeCCCcEEEEEecCC--C--CEeEE--C--CEEc--CCCCceEEEEEecCcccCCceEEEEEEcCCC
Confidence 1 111 1223456666666541 1 22444 1 1111 1112335799999999999999999997654
No 328
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.18 E-value=2.3e-10 Score=111.73 Aligned_cols=86 Identities=23% Similarity=0.351 Sum_probs=72.1
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecc-----eEEEEeee--cCCeEEEEEEE
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGR-----NVLTLDRV--TESENYTCIAA 176 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~-----~~l~i~~l--~d~g~Y~c~a~ 176 (904)
|+.+...|.. ..+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....++.+.. ..|.|.++ +|+|.|+|.|.
T Consensus 117 p~~~~~~~~~-~~v~~g~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 194 (212)
T 2r15_A 117 ARVLGGLPDV-VTIQEGKALNLTCNVWGDPPPEVSWLKN-EKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVK 194 (212)
T ss_dssp CEEEEBCCSE-EEEETTCCEEEEEEEECSSCCEEEEEET-TEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CcccccCCCc-EEEccCCeEEEEEEEcCCCCceEEEEEC-CeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEE
Confidence 4444445555 8999999999999999999999999999 77777766665532 38999999 69999999999
Q ss_pred ecCcceEEEEEEEEE
Q psy8771 177 SVLGVIETSTIVKVQ 191 (904)
Q Consensus 177 n~~g~~~~~~~l~v~ 191 (904)
|..|.....+.|.|.
T Consensus 195 N~~g~~~~~~~l~V~ 209 (212)
T 2r15_A 195 NKYGSETSDFTVSVF 209 (212)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred cCCCcEEEEEEEEEE
Confidence 999999888888887
No 329
>3qt2_A Interleukin-5 receptor subunit alpha; cytokine type I receptor fold, fibronectin type III modules, helical bundle, cytokine, ligand-receptor complex; HET: BGC; 2.55A {Homo sapiens} PDB: 3va2_C
Probab=99.18 E-value=1e-08 Score=104.82 Aligned_cols=216 Identities=13% Similarity=0.106 Sum_probs=129.5
Q ss_pred eeccCCeEEEEEEEEeeCCCCCC-CCCCceeee--cCCCCCCCCCCeEEEecC-----------CceEEEEecCCCCCCC
Q psy8771 445 QALYPNTLYYIWLAAQSPRGEGA-TTPPIPVRT--KQYEPGTAPRDVQVRPLS-----------SSTMVIQWDEPETPNG 510 (904)
Q Consensus 445 ~~L~p~~~Y~~~v~a~~~~g~~~-~s~~~~~~t--~~~~p~~~p~~l~v~~~~-----------~~~~~l~W~~p~~~~~ 510 (904)
..|..+ |.++|++....|.+. +|....... ....|+..|.+|...-.+ ...+..+|.+..+. .
T Consensus 70 ~~L~~~--~~~rVrt~~~~~~s~~~S~w~~~~~~~~~G~p~~~p~nlsC~~~~~~~~~~~~~~~~~~l~CtW~pG~~~-~ 146 (317)
T 3qt2_A 70 TILHMG--FSASVRTILQNDHSLLASSWASAELHAPPGSPGTSIVNLTCTTNTTEDNYSRLRSYQVSLHCTWMVGTDA-P 146 (317)
T ss_dssp CCCTTC--EEEEEEEEEECSSCEEECCCEEEEECCCSCBGGGSCEEEEEEEEEEECSCSSSCCEEEEEEEEEECCTTC-C
T ss_pred cccCCC--eEEEEEEEECCCCCccccccccccccCCCCCCCCcceeeEEEEccccccccccccccceEEEEeeCCCCC-C
Confidence 344443 888888887765432 344433322 223455678899887665 47899999985432 2
Q ss_pred ceeeEEEEEEeCCCCCCcceEEEee-c--CceEEEEcCCCC----CCeEEEEEEEEeCCCCCCCCCcEEEe-cCCCCCCC
Q psy8771 511 QITGYKVYYTQDQSLPMSAWETQVV-D--NNQLTTISDLTP----HTIYTIRVQAFTSVGPGPLSAPVLVK-TQQGVPSQ 582 (904)
Q Consensus 511 ~i~~Y~v~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~L~p----~t~Y~~~V~a~~~~g~~~~S~~~~~~-t~~~~p~~ 582 (904)
....|.+.|+.... ...+..... . ....+.+..... ...|.|.|.+.+..+.- .+....+. .....|.|
T Consensus 147 ~~t~Y~L~y~~~~~--~~eC~~y~~~~~~~~~~C~f~~~~~~~~~~~~~~i~V~gss~~~~i-~s~~~~~~l~~iVkp~P 223 (317)
T 3qt2_A 147 EDTQYFLYYRYGSW--TEECQEYSMDTLGRNIACWFPRTFILSKGRDWLAVLVNGSSKHSAI-RPFDQLFALHAIDQINP 223 (317)
T ss_dssp TTCEEEEEEEETTE--EEECCCEEECTTSCEEEEEESSCSCCTTCCSEEEEEEEEECTTSCB-CCEEEEEEHHHHBCCCC
T ss_pred CCeeEEEEEEeCCC--CeeCCccccCCCcceeEEEeCCccccccCcEEEEEEEEcCCCCccc-cccceEEEHHHcCcCCC
Confidence 34679999987541 111211111 2 134677776532 46789999876654321 22222232 22245678
Q ss_pred CCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCC
Q psy8771 583 PRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTY 662 (904)
Q Consensus 583 p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~ 662 (904)
|.+|.+... .+.+.|+|..|... .......|+|+|+..+
T Consensus 224 P~nL~v~~~-~~~l~v~W~~P~~~----------------------------------------~~~~~L~Yevryr~~~ 262 (317)
T 3qt2_A 224 PLNVTAEIE-GTRMSIQWEKPVSA----------------------------------------FPIHCFDYEVKIHNTR 262 (317)
T ss_dssp CEEEEEEEE-TTEEEEEEECCSSS----------------------------------------SCGGGEEEEEEEEETT
T ss_pred CceeEEEEe-CCcEEEEECCCCcc----------------------------------------cccCceEEEEEEEeCC
Confidence 889988754 57899999987420 1123468999999865
Q ss_pred ccccceEEecccceEEEeCCCCCcEEEEEEEEEcCC-----C-CCCCCCCeeE
Q psy8771 663 AKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR-----G-EGATTPPIPV 709 (904)
Q Consensus 663 ~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~-----G-~~~~s~~~~~ 709 (904)
...+..... ..+.+.+ +|.|++.|.|+|+|.... | .|++|.++.+
T Consensus 263 ~~~~~~~~~-~~~~~~l-~l~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~~~~ 313 (317)
T 3qt2_A 263 NGYLQIEKL-MTNAFIS-IIDDLSKYDVQVRAAVSSMCREAGLWSEWSQPIYV 313 (317)
T ss_dssp TCCEEEEEE-SSSEEEE-ECCTTCCEEEEEEEEECTTTSSCCCCCCCCCCEEE
T ss_pred CCcceEEEE-eeeEEEe-ecCCCCEEEEEEEEeecCCCCCCCCcCCCCCCEEE
Confidence 443322222 2355655 599999999999999542 2 2455655544
No 330
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.18 E-value=1.2e-10 Score=113.74 Aligned_cols=167 Identities=19% Similarity=0.313 Sum_probs=111.0
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC------CceeecceEEEEe-----ee--cCC
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD------DKLPVGRNVLTLD-----RV--TES 168 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~------~~~~~~~~~l~i~-----~l--~d~ 168 (904)
..||.|...|.+ +.+.+|+++.|.|.+.|.|.+.|.|+|+ +..+... .++...++.+.+. ++ +|+
T Consensus 7 ~~pp~i~~~p~~-~~v~~G~~v~l~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 84 (212)
T 2v9r_A 7 DFPPRIVEHPSD-LIVSKGEPATLNCKAEGRPTPTIEWYKG-GERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDE 84 (212)
T ss_dssp CEEEEEEECCCC-EEECTTCCEEECCEEEEESCCEEEEEET-TEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSC
T ss_pred cCCcceecCCCc-eEEeCCCcEEEEEEcCCCCCCEEEEEEC-CEEeeccccccccceEEecCCcEEEEEEEecCCCcccC
Confidence 568899999988 9999999999999999999999999999 5555432 2233345544443 33 699
Q ss_pred eEEEEEEEecCcce-EEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeC-CCccceEEEEEEEeCCCC----C
Q psy8771 169 ENYTCIAASVLGVI-ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTY-PSETLLYYVIQYKPKAAN----T 242 (904)
Q Consensus 169 g~Y~c~a~n~~g~~-~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~-~~~~~~~y~v~~~~~~~~----~ 242 (904)
|.|+|.|.|..|.. +....|.|..... .....|....+ .....++|.+.. .+.+.. .+.|...+.. .
T Consensus 85 G~Y~C~~~n~~g~~~~~~~~l~V~~~~~---~~~~~~~~~~~--~~g~~~~l~C~~~~~~p~~--~v~W~~~~~~l~~~~ 157 (212)
T 2v9r_A 85 GVYVCVARNYLGEAVSHDASLEVAILRD---DFRQNPSDVMV--AVGEPAVMECQPPRGHPEP--TISWKKDGSPLDDKD 157 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECEECS---SCSBCCCCEEE--ETTSCEEEECBCCCEESCC--EEEEEETTEEECTTS
T ss_pred eEEEEEEECCCCceeecceEEEEEeccc---cceeCCCceEe--cCCCcEEEEEecCCCCCCC--EEEEEECCccCCCCc
Confidence 99999999998875 4566777763211 11123334433 334567777765 322222 2444433211 1
Q ss_pred CeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 243 PYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 243 ~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
.... .....+.|.++...+.+.|+|.|.|..|...
T Consensus 158 ~~~~---~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~ 192 (212)
T 2v9r_A 158 ERIT---IRGGKLMITYTRKSDAGKYVCVGTNMVGERE 192 (212)
T ss_dssp TTEE---EETTEEEESSCCGGGCEEEEEEEEETTEEEE
T ss_pred ceEE---ccCCeEEEeeCCHhhCeeEEEEEecccCcee
Confidence 1111 1235799999999999999999999988643
No 331
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.18 E-value=2e-11 Score=129.42 Aligned_cols=238 Identities=14% Similarity=0.171 Sum_probs=132.6
Q ss_pred CCCCcEEEec-------cCCceEEEEeCCCCC--------------CCceecccccccccceEEEEeeeccCCeeeeeee
Q psy8771 36 APRDVQVRPL-------SSSTMVIQWDEPETP--------------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVR 94 (904)
Q Consensus 36 ~p~~l~~~~~-------~~~s~~v~W~~~~~~--------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 94 (904)
....|.|... +.+.+.|.|.+.... ++.+........|.....|...+........+.+
T Consensus 34 ~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l 113 (339)
T 3o4o_C 34 EPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIEL 113 (339)
T ss_dssp BCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEETTEEEESSBCTTCCEEEECCEEETTEEEEEEEEE
T ss_pred ccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeCCeEEECCCCcccCEEEEEEEECCcceEEEEEEE
Confidence 4555555554 667788899765322 2333333344444444444444333223334455
Q ss_pred eccCCCCCCCCeEEcCCCCceEEecCCCeEEEEE-----EccCCCCeEEEeeCCccccCCC-Cceee--cceEEEEeee-
Q psy8771 95 QVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCV-----AVGSPMPFVKWRKGQNIELTPD-DKLPV--GRNVLTLDRV- 165 (904)
Q Consensus 95 ~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~-----~~g~p~p~i~W~k~~~~~~~~~-~~~~~--~~~~l~i~~l- 165 (904)
.+.......++. . ... ..+.+|+.+.|.|. +.|.|.+.|.|+|+ +..+... .++.. +.+.|.|.++
T Consensus 114 ~V~~~~~~~~~~-~--~~~-~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~-g~~~~~~~~~~~~~~~~~~L~i~~v~ 188 (339)
T 3o4o_C 114 RVFENTDAFLPF-I--SYP-QILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKD-SLLLDKDNEKFLSVRGTTHLLVHDVA 188 (339)
T ss_dssp EEECSCGGGHHH-H--CEE-EEEETTSCEEEECCSCTTTCCSSSCCCBCCEES-SCBCCTTCSSEEECTTSSEEEESSCC
T ss_pred EEEcCCCccccc-c--ccc-eEEECCCCEEEEecCCcccccCCCCceEEEecC-CeeCCCCCceeEEcCCcceEEEcccC
Confidence 544321111011 1 112 57889999999999 89999999999999 6666544 45554 3358999999
Q ss_pred -cCCeEEEEEEEecCcc----eEEEEEEEEEeec---CCCCCCCCCCcceEEEeecCCeEEEEEeC-CCccceEEEEEEE
Q psy8771 166 -TESENYTCIAASVLGV----IETSTIVKVQCKY---APLLTLPVAPLDVKISEVTATSVRLDWTY-PSETLLYYVIQYK 236 (904)
Q Consensus 166 -~d~g~Y~c~a~n~~g~----~~~~~~l~v~~~~---~~~~~~P~~p~~l~~~~~~~~sv~l~W~~-~~~~~~~y~v~~~ 236 (904)
+|+|.|+|.|.|..|. ....+.|.|.... .|.+..+ +..+.+.....-.+.|.... .+.+. .-.+.|.
T Consensus 189 ~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~--~~~~~v~~G~~v~L~C~~~~~~g~P~-~~~v~W~ 265 (339)
T 3o4o_C 189 LEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISP--LKTISASLGSRLTIPCKVFLGTGTPL-TTMLWWT 265 (339)
T ss_dssp GGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCC--SCCCCCCCCSCCCCCCCEEESSSCCS-SCEEEEE
T ss_pred HhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecC--CceeEeccCCCEEEEEEEECCCCCCC-CceEEEE
Confidence 6999999999998883 5667777776221 1111111 23332322322333333310 11110 1123333
Q ss_pred eCCCCC-------CeEE-----ee-cce---eceEEEcCCCCCCe-EEEEEEEEcCCCCCCC
Q psy8771 237 PKAANT-------PYSE-----IS-GII---TTYYTVRNLSPYTE-YEFYIIAVNNLGRGPP 281 (904)
Q Consensus 237 ~~~~~~-------~~~~-----~~-~~~---~~~~~i~~L~p~~~-Y~~~v~a~n~~g~s~~ 281 (904)
..+... .... .. ... ...|.|.++...+. +.|+|.|.|..|....
T Consensus 266 ~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~ 327 (339)
T 3o4o_C 266 ANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTL 327 (339)
T ss_dssp SSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECC
T ss_pred ECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEE
Confidence 322110 0111 11 110 12699999999997 9999999999997543
No 332
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.18 E-value=9.3e-11 Score=122.26 Aligned_cols=207 Identities=14% Similarity=0.102 Sum_probs=112.3
Q ss_pred eecccccccccceEEEEeeeccCCeee-eeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEee
Q psy8771 64 ITHPPTRAARSHARLAAQSVLRRGRLA-HAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRK 141 (904)
Q Consensus 64 i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k 141 (904)
++...+...|...+.|...+...|... ...+.+. ...++.+...+.. +....|+.+.|.|.+ .|.|.|.|+|+|
T Consensus 76 L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~---~~~~~~~~~~~~~-~~~~~~~~~~l~C~~~~g~P~~~i~W~~ 151 (308)
T 4fom_A 76 ITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVL---VEPTVSLIKGPDS-LIDGGNETVAAICIAATGKPVAHIDWEG 151 (308)
T ss_dssp EEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEE---BCCEEEEEECSSC-CCTTCSCEEEEEEEEEEEBSCCEEEECC
T ss_pred EEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEee---eccccccccccce-eEEcCCceEEEEEEecCCcCCceEEEEE
Confidence 444444445555555655554444332 2233322 1122233444555 677788999999975 689999999999
Q ss_pred CCccccCCCCcee-----ecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecC
Q psy8771 142 GQNIELTPDDKLP-----VGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTA 214 (904)
Q Consensus 142 ~~~~~~~~~~~~~-----~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~ 214 (904)
+ +..+....... .....|.|.++ +|+|.|+|.|.|..|.......+.+.....|.......+ ...+ ...
T Consensus 152 ~-~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~-~~~~--~~g 227 (308)
T 4fom_A 152 D-LGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYD-GNWF--VGR 227 (308)
T ss_dssp C-SSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCC-SCEE--TTC
T ss_pred C-CcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccc-eeee--ecc
Confidence 9 55554322211 12346888877 699999999999887754444433322122222211111 1111 122
Q ss_pred CeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 215 TSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 215 ~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
..++|.+...+.+.. ..+.|...+...... ........+.|.++...+.+.|+|.|.|..|...
T Consensus 228 ~~v~l~C~~~g~P~p-~~v~W~k~~~~~~~~-~~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~ 291 (308)
T 4fom_A 228 KGVNLKCNADANPPP-FKSVWSRLDGQWPDG-LLASDNTLHFVHPLTFNYSGVYICKVTNSLGQRS 291 (308)
T ss_dssp CSCEEECCEEEESCE-EEEECCBSSSCCCSS-CBCSTTEEECCSCCCSCCCSEEEEEEEETTEEEE
T ss_pred ccEEEEEEEecCCCC-cEEEEEECCeECCCc-EEEcCCeEEEECCCChhhCEEEEEEEEeCCCcEE
Confidence 344444443222111 123444332221111 1112234567889999999999999999999754
No 333
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.18 E-value=5e-11 Score=102.68 Aligned_cols=105 Identities=18% Similarity=0.271 Sum_probs=83.3
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG 699 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G 699 (904)
.+.+|.+|++.+++.+++.|+|.++. +.+.+|.|.|...+............+.++|.+|+|++.|.|+|+|++..|
T Consensus 7 ~p~~P~~l~~~~~t~~sv~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~~v~~~~t~~~l~~L~P~t~Y~~~V~A~~~~~ 83 (115)
T 2cuh_A 7 GPDGPTQLRALNLTEGFAVLHWKPPQ---NPVDTYDIQVTAPGAPPLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPN 83 (115)
T ss_dssp CCSSCEEEECCCCSSSCEEEEEECCS---SCCSEEEEEEECSSSCCEEEEEETTCSEEEECSCCSSSEEEEEEEEEETTE
T ss_pred CCCCCcceEEEeccCCeEEEEEECCC---CCccEEEEEEEcCCCCcEEEEECCCccEEEEeCCCCCCEEEEEEEEEeCCC
Confidence 56889999999999999999999864 468999999987654433344455678999999999999999999999887
Q ss_pred CCCCCCCeeEEecCCCCCCCCCCcEEEecCCCE
Q psy8771 700 EGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTS 732 (904)
Q Consensus 700 ~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~ 732 (904)
.+.+. .+.++|... +|.+|++..++.++
T Consensus 84 ~s~~~-~~~~~T~~~----~P~~l~~~~vt~~s 111 (115)
T 2cuh_A 84 LTSPA-SITFTTGLE----APRDLEAKEVTPSG 111 (115)
T ss_dssp ECCCE-EEEEESCCC----CTTTSSSCCCCCCC
T ss_pred cCCCE-EEEEEeCCC----CCCCcEEEEecCCc
Confidence 76654 456666532 57888887776654
No 334
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=4e-11 Score=100.22 Aligned_cols=75 Identities=19% Similarity=0.326 Sum_probs=67.2
Q ss_pred eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771 115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
+.+.+|+.++|.|.+.|.| |.|.|+|+ +..+....++.+..+.|.|.++ +|+|.|+|.|.|..|.....+.|.|.
T Consensus 13 ~~v~~G~~v~L~C~~~g~p-p~i~W~k~-g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 89 (99)
T 2cr3_A 13 FLVHPGDLLQLRCRLRDDV-QSINWLRD-GVQLAESNRTRITGEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVS 89 (99)
T ss_dssp CCBCTTSCEEEECCCCSSC-CEEEEEES-SSBCCCCSSEEECSSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEECBC
T ss_pred eEEeCCCcEEEEEEecCCC-CeEEEEEC-CEECCCCCcEEEECCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEEe
Confidence 7888999999999999988 79999999 7777777788777889999999 69999999999999998888888877
No 335
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.18 E-value=1.8e-10 Score=117.34 Aligned_cols=163 Identities=12% Similarity=0.194 Sum_probs=97.5
Q ss_pred CeEEcCCCCceEEecCCCeEEEEEEc---cCCCCeEEEeeCCccccCC-----------------CCceee------cce
Q psy8771 105 PQFSIPPPALLEVMLDSPLNLSCVAV---GSPMPFVKWRKGQNIELTP-----------------DDKLPV------GRN 158 (904)
Q Consensus 105 P~~~~~~~~~~~~~~g~~~~l~C~~~---g~p~p~i~W~k~~~~~~~~-----------------~~~~~~------~~~ 158 (904)
+.+...+.. +.+.+|++++|.|.+. |.|.+.|.|+|+++..... ..|+.. .+.
T Consensus 6 ~~v~~~~~~-~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 84 (268)
T 3mj6_A 6 PGLTVSSPQ-LRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDG 84 (268)
T ss_dssp ------CCE-EEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBC
T ss_pred cccccCCCc-eEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEE
Confidence 345555556 9999999999999998 8888999999963321111 133333 237
Q ss_pred EEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeC---CCccceEEEE
Q psy8771 159 VLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTY---PSETLLYYVI 233 (904)
Q Consensus 159 ~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~---~~~~~~~y~v 233 (904)
+|.|.++ +|+|.|+|.|.|..+.......+.+.+ .|..|..+.+. ....++|.+.. .+.+... +
T Consensus 85 ~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V-------~~~~p~~~~v~--~G~~v~L~C~~~~~~~~p~~~--v 153 (268)
T 3mj6_A 85 SLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWV-------LPEEPRDLRVR--VGDTTQMRCSIQSTEEKRVTK--V 153 (268)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEE-------ECCCCSEEEEE--TTCCEEECCBCEESSSSCCCE--E
T ss_pred EEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEE-------eccCCCccccc--cCCcEEEEEEecCCCCCCccc--e
Confidence 8999999 699999999999776654444444441 13344444433 23445555554 2222222 2
Q ss_pred EEEeCCCC---------------C-----------CeEEe--ecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 234 QYKPKAAN---------------T-----------PYSEI--SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 234 ~~~~~~~~---------------~-----------~~~~~--~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
.|...++. . ..... .......+.|.++...+.+.|+|.|.|..|..
T Consensus 154 ~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 227 (268)
T 3mj6_A 154 NWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLES 227 (268)
T ss_dssp EEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred EEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceE
Confidence 22221000 0 00000 01234689999999999999999999977754
No 336
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.17 E-value=6.3e-11 Score=99.99 Aligned_cols=95 Identities=14% Similarity=0.099 Sum_probs=75.8
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccc--eEEecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKH--HRRIGLVETYSLTGLYPNTLYYIWLAAQSP 697 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~--~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~ 697 (904)
.|.+|..+.+. .+.+++.|+|.+..+++.++.+|.|+|+..+...+. ....+...+++|.+|+|++.|+|+|.|.|.
T Consensus 8 ~P~pP~~~~~~-~~~~sv~L~W~p~~dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~N~ 86 (114)
T 2kbg_A 8 EPSPPSIHGQP-SSGKSFKLSITKQDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANR 86 (114)
T ss_dssp CCCSCCEECCB-CSTTCEEEEECCCCCSSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECCCCTTCCEEEEEEEECT
T ss_pred CccCCcccccc-cCCCEEEEEEECCCCCCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEEEeC
Confidence 35566655544 789999999998887888999999999998655553 223455678999999999999999999999
Q ss_pred CCCCCCCCCeeEEecCCCC
Q psy8771 698 RGEGATTPPIPVRTKQYVP 716 (904)
Q Consensus 698 ~G~~~~s~~~~~~t~~~~p 716 (904)
.|.|.+|. ..++|...+|
T Consensus 87 ~G~s~pS~-~~~~T~~~~~ 104 (114)
T 2kbg_A 87 LGYSEPTV-YEFSMPPKPN 104 (114)
T ss_dssp TSCEEEEE-EEECCCCCCS
T ss_pred CcCcCCcC-CEEEcCCCCc
Confidence 99998875 6677765543
No 337
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.17 E-value=1.3e-09 Score=114.64 Aligned_cols=166 Identities=11% Similarity=0.106 Sum_probs=97.9
Q ss_pred CeEEcCCCCceEEecCCCeEEEEEEccC-CCCeEEEeeCCccccC---------CCCcee---------ecceEEEEeee
Q psy8771 105 PQFSIPPPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIELT---------PDDKLP---------VGRNVLTLDRV 165 (904)
Q Consensus 105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~---------~~~~~~---------~~~~~l~i~~l 165 (904)
..|...|.+ +.+.+|+++.|.|.+.|. |.+.|+|+|+ +.... ...|+. .....|.|.++
T Consensus 4 ~~v~~~p~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~-~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v 81 (327)
T 2wng_A 4 LQVIQPDKS-VSVAAGESAILHCTVTSLIPVGPIQWFRG-AGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNI 81 (327)
T ss_dssp CCEECCCSE-EEEETTSCEEECCEESCCCSCCCEEEEES-CSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSC
T ss_pred eEEEcCCCc-eEEecCCcEEEEEEccCcCCCceEEEEEC-CCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccC
Confidence 346677777 999999999999999998 9999999998 43221 112444 23557999999
Q ss_pred --cCCeEEEEEEEecCcce-----EEEEEEEEEeecCCCCCCCCCCcce--EEEeecCCeEEEEEeCCCccceEEEEEEE
Q psy8771 166 --TESENYTCIAASVLGVI-----ETSTIVKVQCKYAPLLTLPVAPLDV--KISEVTATSVRLDWTYPSETLLYYVIQYK 236 (904)
Q Consensus 166 --~d~g~Y~c~a~n~~g~~-----~~~~~l~v~~~~~~~~~~P~~p~~l--~~~~~~~~sv~l~W~~~~~~~~~y~v~~~ 236 (904)
+|+|.|+|.|.|..+.. ...+.|.|. ..|.+|.-. .........++|.+...+.+.....+.|.
T Consensus 82 ~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~-------~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~ 154 (327)
T 2wng_A 82 TPADAGTYYCVKFRKGSPDTEFKSGAGTELSVR-------AKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWF 154 (327)
T ss_dssp CGGGCEEEEEEEEESSTTCEEEEECCCEEEEEE-------BCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEE
T ss_pred ccccCeEEEEEeecCCCcceeEeecCcEEEEEE-------ecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEE
Confidence 69999999999987641 234677777 333332110 00112234455555433211111123343
Q ss_pred eCCCCCCeE--Ee-ec------ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 237 PKAANTPYS--EI-SG------IITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 237 ~~~~~~~~~--~~-~~------~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
..+...... .. .. .....+.|......+.+.|+|.|.|..|..
T Consensus 155 k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~ 206 (327)
T 2wng_A 155 KNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQG 206 (327)
T ss_dssp ETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCS
T ss_pred ECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCC
Confidence 322111000 00 00 111346666666666799999999988763
No 338
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=99.17 E-value=9.2e-11 Score=100.45 Aligned_cols=97 Identities=16% Similarity=0.235 Sum_probs=77.5
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCC-ceeeEEEEEEeCCccccceEE--ecccceEEEeCCCCCcEEEEEEEEEc
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGE-NIISYELYWNDTYAKAKHHRR--IGLVETYSLTGLYPNTLYYIWLAAQS 696 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~-~~~~y~v~~~~~~~~~~~~~~--~~~~~~~~l~~L~p~t~Y~v~V~a~~ 696 (904)
.+.+|.+|++..++.++++|+|.++...++ .+.+|.|+|+..+...+.... ......+++.+|.+++.|.|+|+|+|
T Consensus 8 ~P~~P~~l~~~~~~~~sv~l~W~~p~~~~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n 87 (111)
T 1x5y_A 8 PTSAPQHLTVEDVTDTTTTLKWRPPDRIGAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVGVN 87 (111)
T ss_dssp CCCCCEEEEEEEECSSEEEEEEECCSCCCSSCCCEEEEEEEETTCCCCEESSSSCBSSSEEEEECCCTTCCEEEEEEEEE
T ss_pred CCcCCCCCEEEeccCCEEEEEECCCCcCCCCcccEEEEEEEECCCCceEEccccCCcccEEEECCCCCCCEEEEEEEEEc
Confidence 467899999999999999999999876555 599999999987665553222 13467899999999999999999999
Q ss_pred CCCCCCCCCCe-eEEecCCCC
Q psy8771 697 PRGEGATTPPI-PVRTKQYVP 716 (904)
Q Consensus 697 ~~G~~~~s~~~-~~~t~~~~p 716 (904)
..|.|.+|... .+++.+.+|
T Consensus 88 ~~G~s~~S~~~~~v~~~~~~P 108 (111)
T 1x5y_A 88 IAGRSEPATLLQPVTIRESGP 108 (111)
T ss_dssp TTEECCCCCCSSCBCCCCCCC
T ss_pred CCcCCCCccCCCCEEecCCCC
Confidence 99999888765 345554443
No 339
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.17 E-value=2.8e-10 Score=112.88 Aligned_cols=162 Identities=14% Similarity=0.199 Sum_probs=105.7
Q ss_pred CCCCCcEEEeccCCceEEEEeCCCCC---------------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCC
Q psy8771 35 TAPRDVQVRPLSSSTMVIQWDEPETP---------------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADP 99 (904)
Q Consensus 35 ~~p~~l~~~~~~~~s~~v~W~~~~~~---------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~ 99 (904)
+....|.|...+.+...|.|.+.... ++.+....+...+.....|...+..........+.+...
T Consensus 34 G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~ 113 (231)
T 3ojm_B 34 ANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVER 113 (231)
T ss_dssp TSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccEEEEEEcC
Confidence 36667777776777889999765211 112333334444555555555544333444455555432
Q ss_pred CCCCCCeEEcC-CCCceEEecCCCeEEEEEEccCCCCeEEEee----CCccccCCCCc-ee----------ecceEEEEe
Q psy8771 100 VRRVPPQFSIP-PPALLEVMLDSPLNLSCVAVGSPMPFVKWRK----GQNIELTPDDK-LP----------VGRNVLTLD 163 (904)
Q Consensus 100 ~~~~~P~~~~~-~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k----~~~~~~~~~~~-~~----------~~~~~l~i~ 163 (904)
. ..+|.+... +.. ..+.+|+.+.|.|.+.|.|.|.|.|++ + +..+..... .. ...+.|.|.
T Consensus 114 ~-~~~p~~~~~~~~~-~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 190 (231)
T 3ojm_B 114 S-RHRPILQAGLPAN-ASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKN-GSKYGPDGLPYLKVLKHSGINSSNAEVLALF 190 (231)
T ss_dssp C-CCCCEECTTCSCC-EEEETTCCEEEECCEECSSCCEEEEEEECCBT-TBSBCTTSCBCEEEEEECSTTCSCTTEEEEC
T ss_pred C-CCCCceeeccCCc-eEEEeCCcEEEEEEEecCCCCEEEEEECCCCC-CccccCCCcceEeEecccccccCCccEEEEe
Confidence 2 234445443 445 899999999999999999999999999 6 555533321 11 134579999
Q ss_pred ee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcc
Q psy8771 164 RV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLD 206 (904)
Q Consensus 164 ~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~ 206 (904)
++ +|+|.|+|.|.|..|..+..+.|.|. ..|.+|..
T Consensus 191 ~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~-------~~p~~p~~ 228 (231)
T 3ojm_B 191 NVTEADAGEYICKVSNYIGQANQSAWLTVL-------PKQQAPGR 228 (231)
T ss_dssp SCCGGGCEEEEEEEEETTEEEEEEEEEEEE-------CCC-----
T ss_pred cCCHHHCeEEEEEEEeccceEeeEEEEEEe-------cCCCCCcc
Confidence 98 69999999999999999999999999 67766653
No 340
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=99.17 E-value=1.3e-10 Score=97.76 Aligned_cols=92 Identities=16% Similarity=0.307 Sum_probs=72.9
Q ss_pred CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT 796 (904)
Q Consensus 718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~ 796 (904)
.+|.+|.+..++.+++.|+|++|. +.+.+|.|+|+....... .....+. ..++++|.+|+|++.|.|+|+|.+
T Consensus 4 ~~P~~l~v~~~t~~sv~lsW~~p~-----~~i~~Y~v~y~~~~~~~~-~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~ 77 (104)
T 2rb8_A 4 DAPSQIEVKDVTDTTALITWMPPS-----QPVDGFELTYGIKDVPGD-RTTIDLTEDENQYSIGNLKPDTEYEVSLISRR 77 (104)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCS-----SCCSEEEEEEEETTCTTC-CEEEEEETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCccEEEEecCCeEEEEEcCCC-----CccceEEEEEEECcCCCc-eEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence 368999999999999999999883 668999999988653222 2334455 889999999999999999999999
Q ss_pred CCCCCCCCCcEEeecCCCCC
Q psy8771 797 SIGDGPSSYPITIRTHEDDP 816 (904)
Q Consensus 797 ~~g~g~~s~~~~~~t~~~~P 816 (904)
..|.|..+. ..++|.+..|
T Consensus 78 ~~g~s~p~~-~~~~T~~~~~ 96 (104)
T 2rb8_A 78 GDMSSNPAK-ETFTTGLAAA 96 (104)
T ss_dssp TTEECCCEE-EEEECCC---
T ss_pred CCccCCCEE-EEEECCCCcc
Confidence 999887654 6688877665
No 341
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.17 E-value=1.1e-10 Score=124.17 Aligned_cols=158 Identities=12% Similarity=0.110 Sum_probs=103.4
Q ss_pred eEEecCCCeEEEEEEccCCC-----------CeEEEeeCCc-----cccC---CCCceeecceEEEEeee--cCCeEEEE
Q psy8771 115 LEVMLDSPLNLSCVAVGSPM-----------PFVKWRKGQN-----IELT---PDDKLPVGRNVLTLDRV--TESENYTC 173 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p~-----------p~i~W~k~~~-----~~~~---~~~~~~~~~~~l~i~~l--~d~g~Y~c 173 (904)
+.+.+|+++.|.|.+.|.|. +.|.|+|++. ..+. ...++...++.|.|.++ +|+|.|+|
T Consensus 17 v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 96 (349)
T 4dep_C 17 IQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEKDVLWFRPTLLNDTGNYTC 96 (349)
T ss_dssp CEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEETTEEEESSCCGGGCEEEEE
T ss_pred EEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecCCEEEEccCChhhCEEEEE
Confidence 99999999999999998775 9999999832 1122 23455567789999998 79999999
Q ss_pred EEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeC-----CCccceEEEEEEEeCCCCCCeEEee
Q psy8771 174 IAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTY-----PSETLLYYVIQYKPKAANTPYSEIS 248 (904)
Q Consensus 174 ~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~-----~~~~~~~y~v~~~~~~~~~~~~~~~ 248 (904)
.|.|..|.....+.|.|.............|.. ........+.|.+.. .+.+. ..+.|...+.........
T Consensus 97 ~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~--~~~~~g~~~~l~C~~~~~~~~g~p~--~~v~W~k~~~~l~~~~~~ 172 (349)
T 4dep_C 97 MLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVH--KLYIEYGIQRITCPNVDGYFPSSVK--PTITWYMGCYKIQNFNNV 172 (349)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTSCCSCCCCEE--EEETTCSEEEEECCSCTTSSCTTSC--CEEEEEETTEECCSCSSE
T ss_pred EEecCCceEEEEEEEEEecCCcccCcccccCcc--eeeecCccEEEEcCCCcccccCCCC--ceEEEeeCCEECCCccce
Confidence 999999998888889888211100000011222 223345668888863 11222 234444332111000000
Q ss_pred cceeceEEEcCCCCCCeEEEEEEEEcCC
Q psy8771 249 GIITTYYTVRNLSPYTEYEFYIIAVNNL 276 (904)
Q Consensus 249 ~~~~~~~~i~~L~p~~~Y~~~v~a~n~~ 276 (904)
......+.|.++...+.+.|+|.|.|..
T Consensus 173 ~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 200 (349)
T 4dep_C 173 IPEGMNLSFLIALISNNGNYTCVVTYPE 200 (349)
T ss_dssp EEETTEEEEESCCGGGCEEEEEEEEEEE
T ss_pred eecCCEEEEeeeeecCCcEEEEEEEEee
Confidence 1122679999999999999999999986
No 342
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.17 E-value=8.8e-11 Score=95.46 Aligned_cols=82 Identities=17% Similarity=0.302 Sum_probs=62.5
Q ss_pred CCCeEEcCCCCc-eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEE
Q psy8771 103 VPPQFSIPPPAL-LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 103 ~~P~~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a 175 (904)
.||.|..++.+. +.+.+|+++.|+|.+.| |.|.|+|+|| |..+..+.++.+ ....|.|.++ +|+|.|+|.|
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~-g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a 80 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKD-GQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVA 80 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEET-TSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEEC
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEEC-CEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEE
Confidence 577777777651 34468999999999966 8899999999 888877776654 2247999999 6999999998
Q ss_pred EecCcceEEEEEEEE
Q psy8771 176 ASVLGVIETSTIVKV 190 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v 190 (904)
.| .+.++.|.|
T Consensus 81 ~n----~~~~~~ltV 91 (91)
T 2lvc_A 81 GD----ECAYFTVTI 91 (91)
T ss_dssp SS----CEEEEEEEC
T ss_pred cc----eEEEEEEEC
Confidence 65 345555543
No 343
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.17 E-value=1.4e-10 Score=111.27 Aligned_cols=149 Identities=21% Similarity=0.365 Sum_probs=105.0
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC------------CCc-eecccccccccceEEEEeeeccCC-eeeeeeeeccCCCC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP------------NGQ-ITHPPTRAARSHARLAAQSVLRRG-RLAHAVRQVADPVR 101 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~------------~g~-i~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~v~~~~~ 101 (904)
....|.|...+.+...+.|.+.... +|. ++...+...+.....|...+.... ......+.+
T Consensus 23 ~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v----- 97 (192)
T 2iep_A 23 EVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQV----- 97 (192)
T ss_dssp SCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEE-----
T ss_pred CcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEE-----
Confidence 4555666665667789999875311 111 333333444444445555443333 233344443
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-cceEEEEeee--cCCeEEEEEEEec
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAASV 178 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~ 178 (904)
..+|.+...+.. ..+..|+.+.|.|.+.|.|.+.|.|+++ +..+....++.. .++.|.|.++ +|+|.|+|.|.|.
T Consensus 98 ~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~ 175 (192)
T 2iep_A 98 KMKPKITRPPIN-VKIIEGLKAVLPCTTMGNPKPSVSWIKG-DSALRENSRIAVLESGSLRIHNVQKEDAGQYRCVAKNS 175 (192)
T ss_dssp EEEEEEEECCCC-EEEETTSCEEECCEEEEESCCEEEEEET-TEECCCCSSEEECTTSCEEESSCCGGGCEEEEEEEEET
T ss_pred EeCCccccCCcc-eEEeCCCcEEEEEEEeccCCceEEEEeC-CEEccCCCcEEEecCCcEEEecCChhhCEEEEEEEEcC
Confidence 456888888877 8999999999999999999999999999 777766666554 6678999999 6999999999999
Q ss_pred CcceE-EEEEEEEE
Q psy8771 179 LGVIE-TSTIVKVQ 191 (904)
Q Consensus 179 ~g~~~-~~~~l~v~ 191 (904)
.|... ....|.|.
T Consensus 176 ~g~~~s~~~~l~V~ 189 (192)
T 2iep_A 176 LGTAYSKLVKLEVE 189 (192)
T ss_dssp TEEEECCCEEEEEE
T ss_pred CCcEEEEEEEEEEE
Confidence 99874 46777776
No 344
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.17 E-value=2e-10 Score=98.44 Aligned_cols=72 Identities=17% Similarity=0.195 Sum_probs=58.9
Q ss_pred CCCceeeEEEEEEeCCc----cccce--EEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCC-CCC
Q psy8771 647 SGENIISYELYWNDTYA----KAKHH--RRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYV-PGA 718 (904)
Q Consensus 647 ~~~~~~~y~v~~~~~~~----~~~~~--~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~-p~~ 718 (904)
.++.+.+|.|.|+..+. ..+.. .......++.|.+|+|++.|.|+|+|+|..|.|++|..+.++|.+.+ |..
T Consensus 41 ~~g~i~gY~V~Y~~~~~~~~~~~~~~~~v~~~~~~~~~l~~L~p~T~Y~~~V~A~n~~G~Gp~S~~v~~~T~e~v~Ps~ 119 (120)
T 1ujt_A 41 QPQFIQGYRVMYRQTSGLQATSSWQNLDAKVPTERSAVLVNLKKGVTYEIKVRPYFNEFQGMDSESKTVRTTEESGPSS 119 (120)
T ss_dssp CCSSCCEEEEEEEESSSSSTTTCCEEEECCCTTCCEEEEESCCSSEEEEEEEEEESSSCCCCCCCCEEEEECSSCCCCC
T ss_pred CCCcEeeEEEEEEECCCCCCCCccEEEEecCCCcCEEEECCCCCCCEEEEEEEEECCCccCCCCCCEEEECCCCCCCCC
Confidence 56778999999998765 22322 22334679999999999999999999999999999999999999998 763
No 345
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.17 E-value=9.6e-11 Score=99.60 Aligned_cols=94 Identities=27% Similarity=0.358 Sum_probs=76.2
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCC-ceeeEEEEEEeCCCCCCcceEEEee--cCceEEEEcCCCCCCeEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNG-QITGYKVYYTQDQSLPMSAWETQVV--DNNQLTTISDLTPHTIYTIRV 556 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~p~t~Y~~~V 556 (904)
.|+.+|..+.+..++.+++.|+|.+|...+| .+.+|.|+++..+. ..|..... ...+.+.+.+|.+++.|.|+|
T Consensus 9 ~~p~~P~~P~v~~v~~~sv~L~W~~P~~~gg~~i~~Y~Ve~~~~~~---~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV 85 (112)
T 1bpv_A 9 SPIDPPGKPVPLNITRHTVTLKWAKPEYTGGFKITSYIVEKRDLPN---GRWLKANFSNILENEFTVSGLTEDAAYEFRV 85 (112)
T ss_dssp CCCCCCCCCEEEEEETTEEEEECCCCSCCTTCCCSCCEEEEEETTS---CCCEECCCSCCCSSEEEECSCCSSCCEEEEE
T ss_pred CCCCCCCCCEEEEeeCCEEEEEECCCCcCCCCcccEEEEEEEECCC---CceEEeecccCccCEEEECCCCCCCEEEEEE
Confidence 4567888888999999999999998765555 69999999998753 34655432 456789999999999999999
Q ss_pred EEEeCCCC-CCCCCcEEEecC
Q psy8771 557 QAFTSVGP-GPLSAPVLVKTQ 576 (904)
Q Consensus 557 ~a~~~~g~-~~~S~~~~~~t~ 576 (904)
+|+|..|. |.+|......+.
T Consensus 86 ~A~N~~G~~s~~S~~~~~~t~ 106 (112)
T 1bpv_A 86 IAKNAAGAISPPSEPSDAITC 106 (112)
T ss_dssp EEECTTSCEEEEEEEEEEECS
T ss_pred EEEECCCCCCCCCCCCCCEEe
Confidence 99999997 988877766653
No 346
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.16 E-value=6.9e-11 Score=99.21 Aligned_cols=87 Identities=24% Similarity=0.481 Sum_probs=69.5
Q ss_pred CCCeEEcCCC---CceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc-----eeecceEEEEeee--cCCeEEE
Q psy8771 103 VPPQFSIPPP---ALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK-----LPVGRNVLTLDRV--TESENYT 172 (904)
Q Consensus 103 ~~P~~~~~~~---~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~-----~~~~~~~l~i~~l--~d~g~Y~ 172 (904)
.||.|...|. ..+.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+....+ ...+...|.|.++ +|+|.|+
T Consensus 3 ~~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 81 (100)
T 3caf_A 3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKN-GKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYT 81 (100)
T ss_dssp EEEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEET-TEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEE
T ss_pred CCCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEEC-CEEcccccccccEEEecCeEEEEEccCCcCCCEEEE
Confidence 4677775552 338889999999999999999999999999 665544322 2224568999999 6999999
Q ss_pred EEEEecCcceEEEEEEEE
Q psy8771 173 CIAASVLGVIETSTIVKV 190 (904)
Q Consensus 173 c~a~n~~g~~~~~~~l~v 190 (904)
|.|.|..|.....+.|.|
T Consensus 82 C~a~N~~g~~~~~~~l~V 99 (100)
T 3caf_A 82 CVVENEYGSINHTYHLDV 99 (100)
T ss_dssp EEEEETTEEEEEEEEEEE
T ss_pred EEEEeCCCEEEEEEEEEE
Confidence 999999999888887776
No 347
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.16 E-value=9.1e-11 Score=114.56 Aligned_cols=164 Identities=10% Similarity=0.039 Sum_probs=93.6
Q ss_pred CCCceEEecC--CCeEEEEEEccCCCCeEEEeeC--CccccCCCCceee-cceEEEEeee--cCCeEEEEEEEecCcceE
Q psy8771 111 PPALLEVMLD--SPLNLSCVAVGSPMPFVKWRKG--QNIELTPDDKLPV-GRNVLTLDRV--TESENYTCIAASVLGVIE 183 (904)
Q Consensus 111 ~~~~~~~~~g--~~~~l~C~~~g~p~p~i~W~k~--~~~~~~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~ 183 (904)
|.. +.+.+| +++.|.|.+.| |.+.|+|++. ++..+..+.++.. ..+.|.|.++ +|+|.|+|.|.|..+...
T Consensus 14 p~~-v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~ 91 (213)
T 2x1w_L 14 HGV-VYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQ 91 (213)
T ss_dssp CEE-EEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEE
T ss_pred ceE-EEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeEE
Confidence 345 889999 99999999987 7799999873 3666665555543 4578999999 699999999998544433
Q ss_pred EE-EEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe--E---Eee-------cc
Q psy8771 184 TS-TIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY--S---EIS-------GI 250 (904)
Q Consensus 184 ~~-~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~--~---~~~-------~~ 250 (904)
.. ..|.|.....+.... .++..+.+. ....++|.+...+.+...+.+.|...+..... . ... ..
T Consensus 92 s~~~~l~v~~~~~p~~~~-~~~~~~~v~--~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~ 168 (213)
T 2x1w_L 92 SIMYIVVVVGYRIYDVVL-SPSHGIELS--VGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKK 168 (213)
T ss_dssp CCCEEEEECBCCEEEEEE-ESCSCEEEE--TTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEE
T ss_pred EEEEEEEEeCCcccceEE-cCCCCeEEc--CCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCcccee
Confidence 22 455553100000000 112222222 22334444433211111122333332221100 0 000 11
Q ss_pred eeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 251 ITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 251 ~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
....|.|.+++..+.+.|+|.|.|..|..
T Consensus 169 ~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~ 197 (213)
T 2x1w_L 169 FLSTLTIDGVTRSDQGLYTCAASSGLMTK 197 (213)
T ss_dssp EEEEEEESSCCGGGCEEEEEEEECSSCEE
T ss_pred eeEEEEECCCCcccCEEEEEEEecCCCcE
Confidence 23569999999999999999999998865
No 348
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.16 E-value=1.9e-10 Score=96.83 Aligned_cols=94 Identities=21% Similarity=0.288 Sum_probs=75.4
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG 699 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G 699 (904)
.+.+|.+|++.+++.+++.|+|.++. +.+.+|.|+|+..++...........++++|.+|+|++.|.|+|+|+|..|
T Consensus 7 ~p~~P~~l~v~~~~~~sv~lsW~~p~---~~i~~Y~i~y~~~~~~~~~~~~~~~~ts~~l~~L~p~t~Y~~~V~A~~~~g 83 (105)
T 2cum_A 7 GLEAPRDLEAKEVTPRTALLTWTEPP---VRPAGYLLSFHTPGGQTQEILLPGGITSHQLLGLFPSTSYNARLQAMWGQS 83 (105)
T ss_dssp TCCCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEECTTSCEEEEEECSSCSEEEECSCCTTCEEEEEEEEEBTTB
T ss_pred CCCCCCceEEEeccCCEEEEEEcCCC---CccceEEEEEEeCCCceEEEEECCCccEEEECCCCCCCEEEEEEEEEeCCc
Confidence 57899999999999999999999864 479999999997654322223344668999999999999999999999998
Q ss_pred CCCCCCCeeEEecCCCCC
Q psy8771 700 EGATTPPIPVRTKQYVPG 717 (904)
Q Consensus 700 ~~~~s~~~~~~t~~~~p~ 717 (904)
.+.+. ...++|......
T Consensus 84 ~s~~~-~~~~~T~~~~~~ 100 (105)
T 2cum_A 84 LLPPV-STSFTTGGLRIS 100 (105)
T ss_dssp CCCCE-EEEEECCCSCCS
T ss_pred ccCCE-EEEEEeCCcCCC
Confidence 88764 467777665443
No 349
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.16 E-value=1.2e-10 Score=98.14 Aligned_cols=82 Identities=15% Similarity=0.285 Sum_probs=67.2
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC--ceeec----ceEEEEeee--cCCeEEEEE
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD--KLPVG----RNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~--~~~~~----~~~l~i~~l--~d~g~Y~c~ 174 (904)
.|+.|...+.+ +.+.+|++++|.|.+.| |.+.|.|+|+ +..+.... ++.+. ...|.|.++ +|+|.|+|.
T Consensus 6 ~p~~~~~~~~~-~~v~~G~~v~l~C~~~~-~~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 82 (103)
T 1x44_A 6 SGIMVTKQLED-TTAYCGERVELECEVSE-DDANVKWFKN-GEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVM 82 (103)
T ss_dssp SSCCCSBCCCC-EEEETTEEEEEEEECSS-SSCCCEEEET-TEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEE
T ss_pred CCceeeccCCC-EEEECCCCEEEEEEecC-CCCeEEEEEC-CEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEE
Confidence 34457888888 99999999999999988 7799999999 77776655 44542 268999999 699999999
Q ss_pred EEecCcceEEEEEEEEE
Q psy8771 175 AASVLGVIETSTIVKVQ 191 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~ 191 (904)
|.| ....+.|.|.
T Consensus 83 a~n----~~~~~~l~V~ 95 (103)
T 1x44_A 83 TTG----GQSSAKLSVD 95 (103)
T ss_dssp ETT----EEEEEEEEEE
T ss_pred ECC----CcEEEEEEEe
Confidence 987 5777888888
No 350
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.16 E-value=1.8e-10 Score=108.36 Aligned_cols=155 Identities=13% Similarity=0.136 Sum_probs=104.6
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCe-EEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEec
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASV 178 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~ 178 (904)
..+|.|...|.. +.+.+|+.++|.|.+.|.|.+. +.|+|+ +..+. ...+.|.|.++ +|+|.|+|.+.|.
T Consensus 5 ~~~p~i~~~p~~-~~v~~G~~v~L~C~~~~~p~~~~~~W~~~-~~~~~------~~~~~L~i~~~~~~d~G~Y~C~~~n~ 76 (175)
T 1fnl_A 5 LPKAVVFLEPQW-YSVLEKDSVTLKCQGAYSPEDNSTQWFHN-ESLIS------SQASSYFIDAATVNDSGEYRCQTNLS 76 (175)
T ss_dssp CCCCEEEEESCC-SEEETTCCEEEEEECCCBTTBCCCEEEET-TEEEE------SSCSEEEESSCCGGGCEEEEEECSSS
T ss_pred CCCCEEEEcCCc-eeeeCCCcEEEEeeCCCCCCCcceEEEEC-CEEcc------CCceEEEEeCCCcccCEEEEEEeeCC
Confidence 456888888887 8999999999999999999876 789999 55443 25678999999 6999999999985
Q ss_pred CcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEc
Q psy8771 179 LGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVR 258 (904)
Q Consensus 179 ~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~ 258 (904)
.+ +....|.|. ..+... .++ ...+ .....++|.+...+.+.. ..+.|...+. ... .......+.|.
T Consensus 77 ~~--s~~~~l~V~--~~~~~~--~~~-~~~~--~~g~~~~l~C~~~~~~~~-~~~~W~k~g~--~~~--~~~~~~~L~i~ 142 (175)
T 1fnl_A 77 TL--SDPVQLEVH--IGWLLL--QAP-RWVF--KEEDPIHLRCHSWKNTAL-HKVTYLQNGK--DRK--YFHHNSDFHIP 142 (175)
T ss_dssp CC--CCCEEEEEE--CSSEEE--ECS-CSEE--ETTCCEEEEEEECTTCCC-EEEEEEETTE--EEE--EEEECCCEEES
T ss_pred cc--cccEEEEEe--CCCcee--eCC-Ccee--cCCCCEEEEEEcCCCCCc-eEEEEEECCe--Ecc--CCCCCCEEEEc
Confidence 54 445666666 111100 111 1222 234556677765432221 3345544321 111 12234779999
Q ss_pred CCCCCCeEEEEEEEEcCCCC
Q psy8771 259 NLSPYTEYEFYIIAVNNLGR 278 (904)
Q Consensus 259 ~L~p~~~Y~~~v~a~n~~g~ 278 (904)
++...+.+.|+|.|.|..|.
T Consensus 143 ~v~~~d~G~Y~C~a~n~~~~ 162 (175)
T 1fnl_A 143 KATLKDSGSYFCRGLVGSKN 162 (175)
T ss_dssp SCCGGGCEEEEEEEEETTEE
T ss_pred ccChhhCeEEEEEEEcCCCC
Confidence 99999999999999997553
No 351
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.16 E-value=1.4e-10 Score=97.98 Aligned_cols=97 Identities=23% Similarity=0.259 Sum_probs=74.0
Q ss_pred CCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCC-------CccEEEEec-CcceEEecCCCCC
Q psy8771 714 YVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSD-------SEASIVTLK-NQTSFVLDELKKW 785 (904)
Q Consensus 714 ~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~-------~~~~~~~~~-~~~~~~i~~L~p~ 785 (904)
..|. +|.+|++..++.++|.|+|++|. |.+.+|.|+|....+.. .......+. ..++++|.+|.|+
T Consensus 7 ~~pp-~p~~L~v~~~T~~Si~LsW~~p~-----g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~~~~t~~~l~gL~Pg 80 (112)
T 2cui_A 7 GSRP-RLSQLSVTDVTTSSLRLNWEAPP-----GAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSG 80 (112)
T ss_dssp CCCC-CCCCCEEESCCSSCEEEECCCCT-----TSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTT
T ss_pred CCCC-CCCceEEEeecCCeEEEEECCCC-----CCccEEEEEEEeCCCCccccccccCcceEEEcCCCcCEEEeCCCCCC
Confidence 3444 57999999999999999999873 66899999999765421 123455666 8889999999999
Q ss_pred ceEEEEEEEeeCCCCCCCCCcEEeecCCCCCC
Q psy8771 786 TEYRIWVLAGTSIGDGPSSYPITIRTHEDDPS 817 (904)
Q Consensus 786 t~Y~~~V~a~~~~g~g~~s~~~~~~t~~~~P~ 817 (904)
+.|.|+|+|.+..|.+... ...++|..++++
T Consensus 81 T~Y~~~V~A~~~~~~s~p~-~~~~~T~~~~~~ 111 (112)
T 2cui_A 81 TLYSLTLYGLRGPHKADSI-QGTARTLSGPSS 111 (112)
T ss_dssp CEEEEEEEEECSSSEEEEE-EEEEECCCCSCC
T ss_pred CEEEEEEEEEECCcccCCE-EEEEEECCCCCC
Confidence 9999999999876655432 355777666543
No 352
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.15 E-value=8e-11 Score=122.75 Aligned_cols=146 Identities=15% Similarity=0.142 Sum_probs=96.7
Q ss_pred CcEEEe-ccCCceEEEEeCCCCC---------CCc------eecccccccccceEEEEeeeccCCee--eeeeeeccCCC
Q psy8771 39 DVQVRP-LSSSTMVIQWDEPETP---------NGQ------ITHPPTRAARSHARLAAQSVLRRGRL--AHAVRQVADPV 100 (904)
Q Consensus 39 ~l~~~~-~~~~s~~v~W~~~~~~---------~g~------i~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~v~~~~ 100 (904)
.|.|.. -+.+.+.|+|.+.... ++. +.....+..+.....|...+...... ..+.+.
T Consensus 133 ~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~----- 207 (308)
T 4fom_A 133 AAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILD----- 207 (308)
T ss_dssp EEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECC-----
T ss_pred EEEEEecCCcCCceEEEEECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEE-----
Confidence 344432 3567899999876322 111 11122233344444555544332222 223333
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS 177 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n 177 (904)
+..+|.+...+.+...+..|+.++|.|.+.|.|.| .|.|+|+ +..+..... ..++..|.|.++ +|+|.|+|.|.|
T Consensus 208 V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~-~~~~~~~~~-~~~~~~l~i~~v~~~d~G~Y~C~A~N 285 (308)
T 4fom_A 208 IQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRL-DGQWPDGLL-ASDNTLHFVHPLTFNYSGVYICKVTN 285 (308)
T ss_dssp CCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBS-SSCCCSSCB-CSTTEEECCSCCCSCCCSEEEEEEEE
T ss_pred EecCCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEEC-CeECCCcEE-EcCCeEEEECCCChhhCEEEEEEEEe
Confidence 35678877666655788889999999999999998 6999999 656654322 224556677887 699999999999
Q ss_pred cCcceEEEEEEEEE
Q psy8771 178 VLGVIETSTIVKVQ 191 (904)
Q Consensus 178 ~~g~~~~~~~l~v~ 191 (904)
..|..+.++.|.|.
T Consensus 286 ~~G~~~~~~~l~V~ 299 (308)
T 4fom_A 286 SLGQRSDQKVIYIS 299 (308)
T ss_dssp TTEEEEEEEECCEE
T ss_pred CCCcEEEEEEEEEE
Confidence 99999999999988
No 353
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.15 E-value=7.2e-11 Score=123.41 Aligned_cols=237 Identities=10% Similarity=0.024 Sum_probs=128.8
Q ss_pred CCCCcEEEec-cCCceEEEEeCCCCC---C--------C---ceecccccccccceEEEEeeeccCCeeeeeeeeccCCC
Q psy8771 36 APRDVQVRPL-SSSTMVIQWDEPETP---N--------G---QITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPV 100 (904)
Q Consensus 36 ~p~~l~~~~~-~~~s~~v~W~~~~~~---~--------g---~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~ 100 (904)
....|.|.+. +.+...|.|.+.... + | .++.......|...+.|...+.. |......+.+....
T Consensus 17 ~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~-g~~~s~~l~v~~~~ 95 (312)
T 2y23_A 17 GVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTD-GIASSYLIDEEELK 95 (312)
T ss_dssp CCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSC-CCCEEEEECHHHHH
T ss_pred CeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCC-CcEEEEEEEEeeee
Confidence 3444555543 467889999775321 1 1 12222333344444445444333 33333334432110
Q ss_pred C-------CCCCeEEcCCCCceEEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCCCceeec------ceEEEEeee-
Q psy8771 101 R-------RVPPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVG------RNVLTLDRV- 165 (904)
Q Consensus 101 ~-------~~~P~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~------~~~l~i~~l- 165 (904)
. ..+|.+...+.....+.+|+.+.|.|.+. |.|.+.|.|+|+ +..+....++.+. ...|.|.++
T Consensus 96 ~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~-~~~i~~~~~~~~~~~~~~~~~~L~i~~~~ 174 (312)
T 2y23_A 96 RLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFN-EKEIFEGPKYKMHIDRNTGIIEMFMEKLQ 174 (312)
T ss_dssp HHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEET-TEEECSSSSCEEEEETTTTEEEEEESCCC
T ss_pred eeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEEC-CEECeeCCcEEEEEccCCCEEEEEEccCC
Confidence 0 01444443333128899999999999999 899999999999 7777666655442 224999999
Q ss_pred -cCCeEEEEEEEecCcceEEEEEEEEEeec-------C----CCCCCCCCCc---ceEEEeecCCeEEEEEeCCCccceE
Q psy8771 166 -TESENYTCIAASVLGVIETSTIVKVQCKY-------A----PLLTLPVAPL---DVKISEVTATSVRLDWTYPSETLLY 230 (904)
Q Consensus 166 -~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~-------~----~~~~~P~~p~---~l~~~~~~~~sv~l~W~~~~~~~~~ 230 (904)
+|+|.|+|.|.|..+.. ...+.+.... . +......+|. .+.........+.|.+...+.+..
T Consensus 175 ~~d~G~Y~C~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~l~C~~~~~p~~- 251 (312)
T 2y23_A 175 DEDEGTYTFQLQDGKATN--HSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVLLKCKVANIKKE- 251 (312)
T ss_dssp GGGCEEEEEEEESSSCEE--EEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEEEEEEEESCCSS-
T ss_pred cccCEeEEEEEEeCCceE--EEEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEEEEEEEcCCCCC-
Confidence 69999999998754443 3333331000 0 0000001121 111222334555555554422211
Q ss_pred EEEEEEeCCCC----CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 231 YVIQYKPKAAN----TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 231 y~v~~~~~~~~----~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
..+.|...+.. ..+. .. .....+.|.++...+.+.|+|.|.|..|..
T Consensus 252 ~~v~W~~~g~~~~~~~~~~-~~-~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~ 302 (312)
T 2y23_A 252 THIVWYKDEREISVDEKHD-FK-DGICTLLITEFSKKDAGIYEVILKDDRGKD 302 (312)
T ss_dssp CEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEESTTCCE
T ss_pred CEEEEeeCCEECCCCCcEE-EE-CCEEEEEECcCCHHHCEEEEEEEEcCCCce
Confidence 02334332111 0111 11 223689999999999999999999999864
No 354
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.15 E-value=2e-10 Score=127.09 Aligned_cols=166 Identities=11% Similarity=0.031 Sum_probs=99.2
Q ss_pred CCeEE-cCCCCceEEecCCCeEEEEEEccCCCC---eEEEeeCCccccCCCCcee-ecceEEEEeee--cCCeEEEEEEE
Q psy8771 104 PPQFS-IPPPALLEVMLDSPLNLSCVAVGSPMP---FVKWRKGQNIELTPDDKLP-VGRNVLTLDRV--TESENYTCIAA 176 (904)
Q Consensus 104 ~P~~~-~~~~~~~~~~~g~~~~l~C~~~g~p~p---~i~W~k~~~~~~~~~~~~~-~~~~~l~i~~l--~d~g~Y~c~a~ 176 (904)
+|.+. ..+.+ ..+.+|+.+.|.|.+.|.|.+ .|+|+|+ +..+....+.. ..++.|.|.++ +|+|.|+|.|.
T Consensus 85 ~P~~~~~~~~~-~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~-g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 162 (450)
T 1z7z_I 85 TPERVELAPLP-SWQPVGKNLTLRCQVEGGAPRANLTVVLLRG-EKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTE 162 (450)
T ss_dssp CCSEEEECCCC-SEECTTSEEEEEEEEECCBCGGGEEEEEEET-TEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEE
T ss_pred CCCcceecCCC-ceEeeCCeEEEEEEecCCCCCcCcEEEEeeC-CEEeecccccccccceEEEEEeeccccCceEEEEEE
Confidence 45544 56666 889999999999999999998 9999999 65554322111 23468999888 58999999999
Q ss_pred ecCcceE--------EEEEEEEEeecCCCCCC-CCCCcc---eEEEeecCCeEEEEEeCCCc-cceEEEEEEEeCCCCCC
Q psy8771 177 SVLGVIE--------TSTIVKVQCKYAPLLTL-PVAPLD---VKISEVTATSVRLDWTYPSE-TLLYYVIQYKPKAANTP 243 (904)
Q Consensus 177 n~~g~~~--------~~~~l~v~~~~~~~~~~-P~~p~~---l~~~~~~~~sv~l~W~~~~~-~~~~y~v~~~~~~~~~~ 243 (904)
|..|... ....|.|. .. +.+|.. ..+ .....++|.+...+. +.....+.|...+....
T Consensus 163 n~~g~~~~~~~~~~s~~~~l~v~-------~~~~~~p~~~~~~~v--~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~ 233 (450)
T 1z7z_I 163 LDLRPQGLELFENTSAPYQLQTF-------VLPATPPQLVSPRVL--EVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLN 233 (450)
T ss_dssp EECGGGTSCEEEEECCCEECEEC-------CCCSSCCEEECCSEE--ETTSEEEEEEEEESCTTGGGCEEEEEETTEECC
T ss_pred cccCCCCceEEeeccCccceeee-------ccCCCCCEecCceeE--EeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCC
Confidence 9987533 23344444 22 223332 222 234456666655433 32223455554432111
Q ss_pred eEEeecceeceEE-EcCCCCCCeE--EEEEEEEcCCCCCC
Q psy8771 244 YSEISGIITTYYT-VRNLSPYTEY--EFYIIAVNNLGRGP 280 (904)
Q Consensus 244 ~~~~~~~~~~~~~-i~~L~p~~~Y--~~~v~a~n~~g~s~ 280 (904)
...........+. ..++.+.+.+ .|+|.|.|..|...
T Consensus 234 ~~~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~ 273 (450)
T 1z7z_I 234 PTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQE 273 (450)
T ss_dssp CEEEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEE
T ss_pred ceEEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEE
Confidence 1111111111111 1166788866 99999999987643
No 355
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.15 E-value=5.5e-10 Score=108.96 Aligned_cols=154 Identities=16% Similarity=0.253 Sum_probs=104.0
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC--------------CCc-eeccccc-ccccceEEEEeeeccCCeeeeeeeeccCC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP--------------NGQ-ITHPPTR-AARSHARLAAQSVLRRGRLAHAVRQVADP 99 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~--------------~g~-i~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~v~~~ 99 (904)
....|.|...+.+.+.|.|.+.... ++. ++..... ..+.....|...+........+.+.+...
T Consensus 22 ~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 101 (212)
T 2yd6_A 22 GVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLRE 101 (212)
T ss_dssp SCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEEECG
T ss_pred CeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEEecc
Confidence 5667777777777889999776211 111 2223332 34444455555544333334445555432
Q ss_pred --CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC---Cceee----cceEEEEeee--cCC
Q psy8771 100 --VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD---DKLPV----GRNVLTLDRV--TES 168 (904)
Q Consensus 100 --~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~---~~~~~----~~~~l~i~~l--~d~ 168 (904)
....+|.+...|.. ..+..|+.+.|.|.+.|.|.|.|.|+|+ +..+... .++.. ..+.|.|.++ +|+
T Consensus 102 ~~~~~~~p~~~~~~~~-~~~~~g~~v~l~C~~~g~p~p~v~W~~~-g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 179 (212)
T 2yd6_A 102 DQIPRGFPTIDMGPQL-KVVERTRTATMLCAASGNPDPEITWFKD-FLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQ 179 (212)
T ss_dssp GGCCTTCCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEEET-TEEC------CCEEEEEETTEEEEEECSCCGGGC
T ss_pred CccCCCcceeecCCcc-eeEecCCCEEEEEEecCCCCCeEEEEEC-CccccCcCCCceEEEEecCCeEEEEEcCCCcccC
Confidence 12345888888887 8899999999999999999999999999 6666442 34432 2478999999 699
Q ss_pred eEEEEEEEecCcceE-EEEEEEEE
Q psy8771 169 ENYTCIAASVLGVIE-TSTIVKVQ 191 (904)
Q Consensus 169 g~Y~c~a~n~~g~~~-~~~~l~v~ 191 (904)
|.|+|.|.|..|... ..+.|.+.
T Consensus 180 G~Y~C~a~N~~G~~~s~~a~l~~~ 203 (212)
T 2yd6_A 180 GKYECVATNSAGTRYSAPANLYVR 203 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEEEEECCCCccccccccEEEE
Confidence 999999999999864 55677776
No 356
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.15 E-value=1.2e-10 Score=98.15 Aligned_cols=84 Identities=10% Similarity=0.189 Sum_probs=69.8
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~ 174 (904)
..||.|...+.+ +.+.+|+.++|.|.+.|.|.+ .|.|+|+ |..+..+.|+.+. ..+|.|.++ +|+|.|+|.
T Consensus 6 ~~p~~~~~~~~~-~~v~~G~~v~l~C~v~~~~~~~~v~W~k~-g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 83 (104)
T 2eny_A 6 SGHVGITKRLKT-MEVLEGESCSFECVLSHESASDPAMWTVG-GKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFS 83 (104)
T ss_dssp CCCCCCSBCCCC-EEEESSCCEEEEEECSSCCCSSCBCCBSS-SSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEE
T ss_pred cCCCEEEecCCC-cEEcCCCcEEEEEEEcCCCCCceeEEEEC-CEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEE
Confidence 456788888888 999999999999999999864 8999999 7777666666542 347999999 799999998
Q ss_pred EEecCcceEEEEEEEEE
Q psy8771 175 AASVLGVIETSTIVKVQ 191 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~ 191 (904)
|. ....++.|.|.
T Consensus 84 a~----~~~~~a~L~V~ 96 (104)
T 2eny_A 84 VR----GLTSKASLIVR 96 (104)
T ss_dssp ET----TEEEEECEEEE
T ss_pred EC----CeeEEEEEEEe
Confidence 84 45688899998
No 357
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.15 E-value=2.2e-11 Score=103.64 Aligned_cols=95 Identities=18% Similarity=0.268 Sum_probs=74.1
Q ss_pred CCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEE-ec-CcceEEecCCCCCceEEEEEE
Q psy8771 716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVT-LK-NQTSFVLDELKKWTEYRIWVL 793 (904)
Q Consensus 716 p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~-~~-~~~~~~i~~L~p~t~Y~~~V~ 793 (904)
|+.+|....+..++.+++.|+|.+|.. ..+.++.+|.|+++..+...| .... .. ..+.+++.+|.+++.|.|+|+
T Consensus 10 ~p~~P~~P~v~~v~~~sv~L~W~~P~~-~gg~~i~~Y~Ve~~~~~~~~w--~~~~~~~~~~~~~~v~~L~p~t~Y~frV~ 86 (112)
T 1bpv_A 10 PIDPPGKPVPLNITRHTVTLKWAKPEY-TGGFKITSYIVEKRDLPNGRW--LKANFSNILENEFTVSGLTEDAAYEFRVI 86 (112)
T ss_dssp CCCCCCCCEEEEEETTEEEEECCCCSC-CTTCCCSCCEEEEEETTSCCC--EECCCSCCCSSEEEECSCCSSCCEEEEEE
T ss_pred CCCCCCCCEEEEeeCCEEEEEECCCCc-CCCCcccEEEEEEEECCCCce--EEeecccCccCEEEECCCCCCCEEEEEEE
Confidence 444677788888999999999998742 333469999999998765443 1111 12 678899999999999999999
Q ss_pred EeeCCCC-CCCCCcEEeecCC
Q psy8771 794 AGTSIGD-GPSSYPITIRTHE 813 (904)
Q Consensus 794 a~~~~g~-g~~s~~~~~~t~~ 813 (904)
|.|..|. |++|......|..
T Consensus 87 A~N~~G~~s~~S~~~~~~t~~ 107 (112)
T 1bpv_A 87 AKNAAGAISPPSEPSDAITCR 107 (112)
T ss_dssp EECTTSCEEEEEEEEEEECSC
T ss_pred EEECCCCCCCCCCCCCCEEeC
Confidence 9999997 9999877766543
No 358
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.14 E-value=6.9e-10 Score=106.32 Aligned_cols=155 Identities=21% Similarity=0.319 Sum_probs=103.6
Q ss_pred eeCCCCCCCCcEEEeccCCceEEEEeCCCC------------CCCceecccccccccceEEEEeeeccCCeeeeeeeecc
Q psy8771 30 VTEPGTAPRDVQVRPLSSSTMVIQWDEPET------------PNGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVA 97 (904)
Q Consensus 30 ~~~p~~~p~~l~~~~~~~~s~~v~W~~~~~------------~~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~ 97 (904)
+....+....|.|...+.+...+.|.+... .++.++.......+.....|...+..........+.+
T Consensus 14 ~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V- 92 (192)
T 2va4_A 14 ATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQV- 92 (192)
T ss_dssp EETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE-
T ss_pred EEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccccccceEEEEEE-
Confidence 344444677777777777888999976521 1223444444455555555555544333333444444
Q ss_pred CCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccccCC-----CCceee----cceEEEEeee--
Q psy8771 98 DPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIELTP-----DDKLPV----GRNVLTLDRV-- 165 (904)
Q Consensus 98 ~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~~~-----~~~~~~----~~~~l~i~~l-- 165 (904)
..+|.+...+. ..+..|+.+.|.|.+.|.|.+.|.|++++ +..+.. ..++.. ....|.|.++
T Consensus 93 ----~~~p~~~~~~~--~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 166 (192)
T 2va4_A 93 ----FVQPHIIQLKN--ETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKL 166 (192)
T ss_dssp ----EEEEEEEEECC--EEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCG
T ss_pred ----EccCcccccCc--ceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCc
Confidence 34566655443 67778999999999999999999999973 223322 233433 2468999999
Q ss_pred cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771 166 TESENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 166 ~d~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
+|+|.|+|.|.|..|..+.++.|.|+
T Consensus 167 ~d~G~Y~C~a~n~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 167 SDSGRYDCEAASRIGGHQKSMYLDIE 192 (192)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred ccCEEEEEEEEecCCceEEEEEEEeC
Confidence 69999999999999998888888763
No 359
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.14 E-value=7.2e-11 Score=104.63 Aligned_cols=80 Identities=25% Similarity=0.423 Sum_probs=64.9
Q ss_pred CCCceEEecCCCeEEEEEEccCCCCeEEEeeCCc---------------------------ccc-CCCCceeec----ce
Q psy8771 111 PPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQN---------------------------IEL-TPDDKLPVG----RN 158 (904)
Q Consensus 111 ~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~---------------------------~~~-~~~~~~~~~----~~ 158 (904)
|.+ +.+.+|+.++|.|.+.|.|.|.|+|+|++. ..+ ....|+.+. ..
T Consensus 25 p~~-~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s 103 (139)
T 1gxe_A 25 PDT-IVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRS 103 (139)
T ss_dssp CCE-EEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEE
T ss_pred CCC-EEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEE
Confidence 445 999999999999999999999999999941 333 233454431 24
Q ss_pred EEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771 159 VLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 159 ~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
.|.|.++ +|+|.|+|.|.|..|.....+.|.|.
T Consensus 104 ~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 104 IFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 7999999 69999999999999999888888774
No 360
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=99.14 E-value=1.7e-10 Score=96.92 Aligned_cols=93 Identities=16% Similarity=0.237 Sum_probs=73.4
Q ss_pred CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCc-ccc-ceEEecccceEEEeCCCCCcEEEEEEEEEcCC
Q psy8771 621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA-KAK-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR 698 (904)
Q Consensus 621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~-~~~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~ 698 (904)
+.+|.+|++.+++.+++.|+|.++. +.+.+|.|.|+..+. ... ........++++|.+|+|++.|.|+|+|++..
T Consensus 3 p~~P~~l~v~~~t~~sv~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~~ 79 (104)
T 2rb8_A 3 LDAPSQIEVKDVTDTTALITWMPPS---QPVDGFELTYGIKDVPGDRTTIDLTEDENQYSIGNLKPDTEYEVSLISRRGD 79 (104)
T ss_dssp CCCCEEEEEESCCSSCEEEEEECCS---SCCSEEEEEEEETTCTTCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEETT
T ss_pred CCCCCccEEEEecCCeEEEEEcCCC---CccceEEEEEEECcCCCceEEEEcCCCcCEEEeCCCCCCCEEEEEEEEEeCC
Confidence 6789999999999999999999864 679999999987653 222 22345567899999999999999999999999
Q ss_pred CCCCCCCCeeEEecCCCCC
Q psy8771 699 GEGATTPPIPVRTKQYVPG 717 (904)
Q Consensus 699 G~~~~s~~~~~~t~~~~p~ 717 (904)
|.|.++ ...++|....|.
T Consensus 80 g~s~p~-~~~~~T~~~~~~ 97 (104)
T 2rb8_A 80 MSSNPA-KETFTTGLAAAL 97 (104)
T ss_dssp EECCCE-EEEEECCC----
T ss_pred ccCCCE-EEEEECCCCccc
Confidence 988765 466788766554
No 361
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.14 E-value=7e-10 Score=107.90 Aligned_cols=160 Identities=13% Similarity=0.107 Sum_probs=106.4
Q ss_pred eEEecCCCeEEEEEEccCCCCeEEEeeCCccccC------------------CCCceee-cceEEEEeee--cCCeEEEE
Q psy8771 115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT------------------PDDKLPV-GRNVLTLDRV--TESENYTC 173 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~------------------~~~~~~~-~~~~l~i~~l--~d~g~Y~c 173 (904)
..+.+|+++.|.|.+.+.|.+.|.|+|++..... ...|+.+ .+++|.|.++ +|+|.|+|
T Consensus 9 ~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C 88 (208)
T 3r4d_A 9 PQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTL 88 (208)
T ss_dssp SEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEEE
T ss_pred ceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEEE
Confidence 6788999999999999999999999997321110 1223332 4568999999 69999999
Q ss_pred EEEecC-cceEEEEEEEEEeecCCCCCCCCCCcceEEE---eecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeE
Q psy8771 174 IAASVL-GVIETSTIVKVQCKYAPLLTLPVAPLDVKIS---EVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYS 245 (904)
Q Consensus 174 ~a~n~~-g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~---~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~ 245 (904)
.+.|.. +.......|.|. ..+..|. +... ......+.|.+...+.+. .+.|...+. .....
T Consensus 89 ~~~~~~~~~~~~~~~l~V~-------~~~~~p~-i~~~~~~~~~g~~v~l~C~~~~~pp---~i~W~~~g~~l~~~~~~~ 157 (208)
T 3r4d_A 89 DMTDENYRRTQATVRFHVH-------QPVTQPF-LQVTNTTVKELDSVTLTCLSNDIGA---NIQWLFNSQSLQLTERMT 157 (208)
T ss_dssp EEECSSCEEEEEEEEEEEE-------CCCCCCE-EEESCSSCCTTCCEEEEEECSCTTC---EEEEEETTEECCCCSSEE
T ss_pred EEEcccCceeEEEEEEEec-------cCCCCCE-EecCCceEeeCCCEEEEEECCCCCC---ceEEEECCEeCCCCCCeE
Confidence 999985 556677777777 3333332 1111 123456777777664432 344544321 11111
Q ss_pred EeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEe
Q psy8771 246 EISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVIT 288 (904)
Q Consensus 246 ~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~ 288 (904)
.. .....+.|.++...+.+.|+|.|.|..|... +.++.+.
T Consensus 158 -~~-~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~-s~~~~l~ 197 (208)
T 3r4d_A 158 -LS-QNNSILRIDPIKREDAGEYQCEISNPVSVRR-SNSIKLD 197 (208)
T ss_dssp -EE-TTTTEEEESSCCGGGCEEEEEEEECTTCCEE-CCCEEEC
T ss_pred -Ec-CCCCEEEEeccCHHhCeEEEEEEecCCCccc-CCceeee
Confidence 11 2226799999999999999999999999754 5555554
No 362
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=99.14 E-value=2.5e-10 Score=95.26 Aligned_cols=86 Identities=24% Similarity=0.368 Sum_probs=71.3
Q ss_pred CCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCC-CeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771 200 LPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANT-PYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278 (904)
Q Consensus 200 ~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~ 278 (904)
.|++|.++++...+.+++.|+|.+|...+.+|.|+|+..+... ..........+.++|.+|+|++.|.|+|+|.|..|.
T Consensus 1 ~p~~P~~l~~~~~~~~sv~lsW~pP~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~i~~L~p~t~Y~~~V~A~n~~g~ 80 (100)
T 3b83_A 1 MLQPPFNIKVTNITLTTAVVTWQPPILPIEGILVTFGRKNDPSDETTVDLTSSITSLTLTNLEPNTTYEIRIVARNGQQY 80 (100)
T ss_dssp CCCCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEEESSCTTTCEEEEECTTEEEEEECSCCTTCEEEEEEEEEETTEE
T ss_pred CCccCCccEEEEecCCEEEEEEcCCcccCCEEEEEEEECCCCCCceEEEECCcceEEEECCCCCCCEEEEEEEEEeCCCC
Confidence 4789999999999999999999999778999999998765333 333334456789999999999999999999999998
Q ss_pred CCCCCCe
Q psy8771 279 GPPSSPA 285 (904)
Q Consensus 279 s~~s~~~ 285 (904)
|.++...
T Consensus 81 s~p~~~~ 87 (100)
T 3b83_A 81 SPPVSTT 87 (100)
T ss_dssp CCCEEEE
T ss_pred CCCEEEE
Confidence 7765443
No 363
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.13 E-value=1.3e-09 Score=104.13 Aligned_cols=148 Identities=16% Similarity=0.193 Sum_probs=98.6
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC----CC-----------ceecccccccccceEEEEeeeccCCe-eeeeeeeccCC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP----NG-----------QITHPPTRAARSHARLAAQSVLRRGR-LAHAVRQVADP 99 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~----~g-----------~i~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~ 99 (904)
....|.|...+.+. .+.|.+.... .+ .+........+.....|...+..... ...+.+.+
T Consensus 18 ~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~v--- 93 (189)
T 2v44_A 18 ESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEI--- 93 (189)
T ss_dssp CCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEE---
T ss_pred CcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEEE---
Confidence 45566666666656 8999883211 11 23333334444444445554433222 23334443
Q ss_pred CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC--CCCceee-cceEEEEeee--cCCeEEEEE
Q psy8771 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT--PDDKLPV-GRNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~--~~~~~~~-~~~~l~i~~l--~d~g~Y~c~ 174 (904)
..+|.+...+.. ..+..|+.++|.|.+.|.|.|.|.|+|+ +..+. ...++.. .++.|.|.++ +|+|.|+|.
T Consensus 94 --~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 169 (189)
T 2v44_A 94 --YQKLTFREVVSP-QEFKQGEDAEVVCRVSSSPAPAVSWLYH-NEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCE 169 (189)
T ss_dssp --ECCCEEESCCCS-EEEETTSCEEECCEEECSSCCEEEEEEE-C--CEECCCTTEEECTTSCEEETTCCGGGCEEEEEE
T ss_pred --ecCCceeecCCc-EEEeCCCCEEEEEEECcCCCCcEEEEEC-CcEEeccCCCCEEEecCCcEEEEEcCcccCeEEEEE
Confidence 457888877777 8999999999999999999999999998 54443 3445543 6679999999 699999999
Q ss_pred EEecCcceEEEEEEEEE
Q psy8771 175 AASVLGVIETSTIVKVQ 191 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~ 191 (904)
|.|..|.......+.+.
T Consensus 170 a~n~~~~~~~~~~~~v~ 186 (189)
T 2v44_A 170 GRVEARGEIDFRDIIVI 186 (189)
T ss_dssp EEETTTTEEEEEEEEEE
T ss_pred EEccccCceeeeeEEEE
Confidence 99999876655555544
No 364
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.13 E-value=1.2e-10 Score=117.10 Aligned_cols=158 Identities=14% Similarity=0.114 Sum_probs=97.9
Q ss_pred EcCCCCceEEecCCCeEEEEEEcc---CCCCeEEEeeCCcccc------------------------------CCCCcee
Q psy8771 108 SIPPPALLEVMLDSPLNLSCVAVG---SPMPFVKWRKGQNIEL------------------------------TPDDKLP 154 (904)
Q Consensus 108 ~~~~~~~~~~~~g~~~~l~C~~~g---~p~p~i~W~k~~~~~~------------------------------~~~~~~~ 154 (904)
..++.. +.+.+|++++|.|.+.| .|.+.|.|+|+ +... ....|+.
T Consensus 6 ~~~~~~-v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 83 (250)
T 2fbo_J 6 RTTHTE-VEVHAGGTVELPCSYQLANDTQPPVISWLKG-ASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRAS 83 (250)
T ss_dssp ECSCSE-EEECTTSCEEECCEEEECSCCSCCEEEEEEE-EETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEE
T ss_pred EcCCCc-eEEecCCeEEEEEEeEcCCCCCceEEEEEeC-CCCCccEEEEeeccccccccccccccccccccCCCcCceEE
Confidence 334445 89999999999999998 88999999998 4221 0123333
Q ss_pred ec---ceEEEEeee--cCCeEEEEEEEecCcce-----EEEEEEEEEeecCCCCCCCCC-------CcceEEEeecCCeE
Q psy8771 155 VG---RNVLTLDRV--TESENYTCIAASVLGVI-----ETSTIVKVQCKYAPLLTLPVA-------PLDVKISEVTATSV 217 (904)
Q Consensus 155 ~~---~~~l~i~~l--~d~g~Y~c~a~n~~g~~-----~~~~~l~v~~~~~~~~~~P~~-------p~~l~~~~~~~~sv 217 (904)
+. +.+|.|.++ +|+|.|+|.|.|..+.. +..+.|.|. ..|.+ +..+.+ .....+
T Consensus 84 ~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~-------~~~~~~~~~~~~~~~~~v--~~g~~v 154 (250)
T 2fbo_J 84 VANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVT-------GHTPSNNVHVSTAEVVQV--DEGNDI 154 (250)
T ss_dssp CSCTTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEET-------TTSCCSCCEECCCSEEEC--CTTCCE
T ss_pred eccCCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEe-------ccCCCCeEEEecCceEEe--cCCCcE
Confidence 32 358999999 69999999999987753 456777776 22211 111111 123445
Q ss_pred EEEEeCCCccceEEEEEEEeCCCCCCe------EE-------------------eecceeceEEEcCCCCCCeEEEEEEE
Q psy8771 218 RLDWTYPSETLLYYVIQYKPKAANTPY------SE-------------------ISGIITTYYTVRNLSPYTEYEFYIIA 272 (904)
Q Consensus 218 ~l~W~~~~~~~~~y~v~~~~~~~~~~~------~~-------------------~~~~~~~~~~i~~L~p~~~Y~~~v~a 272 (904)
.|.+...+.+.. .|.|...+..... .. ........|.|.++++.+.+.|+|.|
T Consensus 155 ~L~C~~~g~p~p--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 232 (250)
T 2fbo_J 155 TMTCPCTDCANA--NVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCEL 232 (250)
T ss_dssp EECCCEESCTTC--EEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEE
T ss_pred EEEEEecCCCCC--eeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEe
Confidence 555554322222 2333222110000 00 00002268999999999999999999
Q ss_pred EcCCCC
Q psy8771 273 VNNLGR 278 (904)
Q Consensus 273 ~n~~g~ 278 (904)
.|..|.
T Consensus 233 ~N~~g~ 238 (250)
T 2fbo_J 233 ATGQGE 238 (250)
T ss_dssp ESSSSG
T ss_pred cCCccc
Confidence 997774
No 365
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.13 E-value=1.9e-10 Score=99.04 Aligned_cols=108 Identities=23% Similarity=0.310 Sum_probs=84.9
Q ss_pred CCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771 198 LTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277 (904)
Q Consensus 198 ~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g 277 (904)
.+.|.+|.+|++...+.+++.|+|.++.+.+.+|.|.|...+.. ..........+.+.|.+|+|++.|.|+|+|.|..|
T Consensus 5 ~t~p~~P~~l~~~~~t~~sv~lsW~~p~~~i~~Y~v~y~~~~~~-~~~~~v~~~~t~~~l~~L~P~t~Y~~~V~A~~~~~ 83 (115)
T 2cuh_A 5 SSGPDGPTQLRALNLTEGFAVLHWKPPQNPVDTYDIQVTAPGAP-PLQAETPGSAVDYPLHDLVLHTNYTATVRGLRGPN 83 (115)
T ss_dssp CCCCSSCEEEECCCCSSSCEEEEEECCSSCCSEEEEEEECSSSC-CEEEEEETTCSEEEECSCCSSSEEEEEEEEEETTE
T ss_pred ccCCCCCcceEEEeccCCeEEEEEECCCCCccEEEEEEEcCCCC-cEEEEECCCccEEEEeCCCCCCEEEEEEEEEeCCC
Confidence 47889999999999999999999999988899999999875432 22223344568999999999999999999999888
Q ss_pred CCCCCCCeEEecCCCCCCCCCCceEecccCCCee
Q psy8771 278 RGPPSSPAVITTGETEPGTAPRDVQVRPLSSSTM 311 (904)
Q Consensus 278 ~s~~s~~~~~~t~~~~p~~~p~~l~~~~~~~~~v 311 (904)
.+.+.. ..+.+. +.+|.+|.+..++.+++
T Consensus 84 ~s~~~~-~~~~T~----~~~P~~l~~~~vt~~s~ 112 (115)
T 2cuh_A 84 LTSPAS-ITFTTG----LEAPRDLEAKEVTPSGP 112 (115)
T ss_dssp ECCCEE-EEEESC----CCCTTTSSSCCCCCCCC
T ss_pred cCCCEE-EEEEeC----CCCCCCcEEEEecCCcc
Confidence 765433 444443 35788999888876654
No 366
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.13 E-value=1.4e-10 Score=97.92 Aligned_cols=83 Identities=18% Similarity=0.273 Sum_probs=70.4
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a 175 (904)
..||.|...+.+ +.+.+|+.+.|.|.+.| |.+.|.|+|+ +..+....++.+. ...|.|.++ +|+|.|+|.|
T Consensus 6 ~~pp~~~~~~~~-~~v~~G~~v~l~C~~~~-~~~~v~W~k~-g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (103)
T 2edf_A 6 SGPAAIIKPLED-QWVAPGEDVELRCELSR-AGTPVHWLKD-RKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEV 82 (103)
T ss_dssp CCCCCEEECCCC-EEECTTSCEEECCEESS-SSCCCCEEES-SCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEEC
T ss_pred CCCcEEEecCCc-cEEcCCCCEEEEEEEeC-CCCcEEEEEC-CEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEE
Confidence 568889998888 99999999999999998 8889999999 7777666666642 237999998 6999999999
Q ss_pred EecCcceEEEEEEEEE
Q psy8771 176 ASVLGVIETSTIVKVQ 191 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~ 191 (904)
.| ....+.|.|.
T Consensus 83 ~n----~~~~~~l~V~ 94 (103)
T 2edf_A 83 EA----SKSTASLHVE 94 (103)
T ss_dssp SS----CEEEEEEEEC
T ss_pred cc----CCcEEEEEEe
Confidence 98 3677788888
No 367
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=99.13 E-value=3.5e-10 Score=94.42 Aligned_cols=80 Identities=20% Similarity=0.309 Sum_probs=67.7
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc-c-ceEEecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA-K-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSP 697 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~-~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~ 697 (904)
.+.+|.+|++.+++.+++.|+|.++. .++.+.+|.|.|...++.. . ........++++|.+|+|++.|.|+|+|++.
T Consensus 4 ~~~~P~~l~v~~~t~~Sv~l~W~~p~-~~~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~~~V~A~~~ 82 (101)
T 3k2m_C 4 VSSVPTKLEVVAATPTSLLISWDAPM-SSSSVYYYRITYGETGGNSPVQEFTVPYSSSTATISGLSPGVDYTITVYAWGE 82 (101)
T ss_dssp EEBSSCEEEEEEEETTEEEEEECCCC-TTSCCCEEEEEEEETTCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEE
T ss_pred CCCCCcceEEeecCCCEEEEEecCCC-CCCceeeEEEEEEECCCCCccEEEEcCCCccEEEECCCCCCCEEEEEEEEEeC
Confidence 35789999999999999999999986 4678999999999876532 2 2334456789999999999999999999999
Q ss_pred CCC
Q psy8771 698 RGE 700 (904)
Q Consensus 698 ~G~ 700 (904)
.|.
T Consensus 83 ~~~ 85 (101)
T 3k2m_C 83 DSA 85 (101)
T ss_dssp CTT
T ss_pred Ccc
Confidence 888
No 368
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=99.13 E-value=3.6e-10 Score=94.40 Aligned_cols=78 Identities=24% Similarity=0.413 Sum_probs=66.1
Q ss_pred CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS 797 (904)
Q Consensus 719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~ 797 (904)
+|.+|++...+.+++.|+|++|. .++.+.+|.|.|...++... .....+. ..++++|.+|.|++.|.|+|+|.+.
T Consensus 7 ~P~~l~v~~~t~~Sv~l~W~~p~---~~~~i~~Y~v~y~~~~~~~~-~~~~~v~~~~t~~~l~~L~p~t~Y~~~V~A~~~ 82 (101)
T 3k2m_C 7 VPTKLEVVAATPTSLLISWDAPM---SSSSVYYYRITYGETGGNSP-VQEFTVPYSSSTATISGLSPGVDYTITVYAWGE 82 (101)
T ss_dssp SSCEEEEEEEETTEEEEEECCCC---TTSCCCEEEEEEEETTCSSC-CEEEEEETTCCEEEECSCCTTCEEEEEEEEEEE
T ss_pred CCcceEEeecCCCEEEEEecCCC---CCCceeeEEEEEEECCCCCc-cEEEEcCCCccEEEECCCCCCCEEEEEEEEEeC
Confidence 68999999999999999999984 46889999999998764322 2333455 8899999999999999999999998
Q ss_pred CCC
Q psy8771 798 IGD 800 (904)
Q Consensus 798 ~g~ 800 (904)
.|.
T Consensus 83 ~~~ 85 (101)
T 3k2m_C 83 DSA 85 (101)
T ss_dssp CTT
T ss_pred Ccc
Confidence 887
No 369
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.13 E-value=8.2e-10 Score=104.94 Aligned_cols=153 Identities=14% Similarity=0.129 Sum_probs=99.1
Q ss_pred eEEecCCCeEEEEEEccCCCC--eEEEeeCCccccCCCCceeecceEEEEeeecCCeEEEEEEEecCcceEEEEEEEEEe
Q psy8771 115 LEVMLDSPLNLSCVAVGSPMP--FVKWRKGQNIELTPDDKLPVGRNVLTLDRVTESENYTCIAASVLGVIETSTIVKVQC 192 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l~d~g~Y~c~a~n~~g~~~~~~~l~v~~ 192 (904)
..+.+|+.++|.|.+.|.|.| .+.|+|+ +..+...... .....|.|...+|+|.|+|.|.|. ....+.|.|.
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~-~~~l~~~~~~-~~~~~l~i~~~~d~G~Y~C~~~n~---~~~~~~l~V~- 81 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKG-GVVLKEDALP-GQKTEFKVDSDDQWGEYSCVFLPE---PMGTANIQLH- 81 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESS-SEEEECTTCC-CSEEEEEECGGGCCEEEEEEEEST---TSCEEEEEEC-
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeC-CEEeeccccc-CCcEEEEEechhhCeEEEEEEECC---cCcEEEEEEe-
Confidence 677899999999999998887 8999999 6666443322 234567777678999999999982 2355667776
Q ss_pred ecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCcc-ceEEEEEEEeCCC----------CCCeEEeecceeceEEEcCCC
Q psy8771 193 KYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSET-LLYYVIQYKPKAA----------NTPYSEISGIITTYYTVRNLS 261 (904)
Q Consensus 193 ~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~-~~~y~v~~~~~~~----------~~~~~~~~~~~~~~~~i~~L~ 261 (904)
..|... ..+....+ .....++|.+...+.+ ... +.|..... ...+..........+.|.++.
T Consensus 82 -~~P~~~--~~~~~~~~--~~g~~~~l~C~~~g~p~~~~--i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~ 154 (184)
T 3b5h_A 82 -GPPRVK--AVKSSEHI--NEGETAMLVCKSESVPPVTD--WAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLN 154 (184)
T ss_dssp -CSCCCE--ESCSEEEE--CTTSCEEEEEECCCSSCCCE--EEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCC
T ss_pred -cCCcee--ecCCCcEE--cCCCcEEEEEEECCCCCCCe--EEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeecc
Confidence 222111 12222222 3345677777765444 333 33333110 012222222334589999999
Q ss_pred -CCCeEEEEEEEEcCCCCCC
Q psy8771 262 -PYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 262 -p~~~Y~~~v~a~n~~g~s~ 280 (904)
+.+.+.|+|.|.|..|...
T Consensus 155 ~~~d~G~Y~C~a~N~~g~~~ 174 (184)
T 3b5h_A 155 MEADPGQYRCNGTSSKGSDQ 174 (184)
T ss_dssp TTTSSEEEEEEEEETTEEEE
T ss_pred ccccCceEEEEEEeCCCcce
Confidence 9999999999999988643
No 370
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.13 E-value=1.4e-10 Score=109.03 Aligned_cols=144 Identities=14% Similarity=0.170 Sum_probs=97.6
Q ss_pred eEEecCCCeEEEEEEcc--CCCCeEEEeeCCcccc----------CCCCceee-cceEEEEeee--cCCeEEEEEEEecC
Q psy8771 115 LEVMLDSPLNLSCVAVG--SPMPFVKWRKGQNIEL----------TPDDKLPV-GRNVLTLDRV--TESENYTCIAASVL 179 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g--~p~p~i~W~k~~~~~~----------~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~ 179 (904)
+.+.+|++++|.|...+ .|.+.|.|+|+ +..+ ....|+.+ .+++|.|.++ +|+|.|+|.|.|..
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~-~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~ 84 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERG-STLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTN 84 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEET-TEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETT
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeC-CceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEeCC
Confidence 77899999999995544 66789999999 4322 23456554 5678999999 79999999999999
Q ss_pred cce--EEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEE
Q psy8771 180 GVI--ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTV 257 (904)
Q Consensus 180 g~~--~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i 257 (904)
|.. +..+.|.|. ..+..|. +. .....++|.+...+.+.. .+.|...+ ... ... ..+.|
T Consensus 85 g~~~~~~~~~l~V~-------~~~~~p~---i~-~~~~~v~L~C~~~g~p~p--~i~W~~~g--~~l---~~~--~~~~i 144 (176)
T 1hng_A 85 GTRILNKALDLRIL-------EMVSKPM---IY-WECSNATLTCEVLEGTDV--ELKLYQGK--EHL---RSL--RQKTM 144 (176)
T ss_dssp CCEEEEEEEEEEEE-------CCCCCCE---EE-EETTTTEEEEECSSCSSC--EEEEEETT--EEE---EEE--SSSEE
T ss_pred CCEEEEEEEEEEEe-------CCCCCCE---EE-ecCCcEEEEEEecCCCCc--EEEEEECC--EEC---CCC--CcEEE
Confidence 986 666777777 4433342 22 223346777766544433 34555432 111 111 22455
Q ss_pred cCCCCCCeEEEEEEEEcCCCCC
Q psy8771 258 RNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 258 ~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
..+...+.+.|+|.|.|..|..
T Consensus 145 ~~~~~~d~G~Y~C~a~N~~g~~ 166 (176)
T 1hng_A 145 SYQWTNLRAPFKCKAVNRVSQE 166 (176)
T ss_dssp EEECSCCSSCEEEEEEETTEEE
T ss_pred EEEEccCCeEEEEEEEecCCCc
Confidence 5777899999999999998864
No 371
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.12 E-value=7.1e-10 Score=93.37 Aligned_cols=92 Identities=27% Similarity=0.274 Sum_probs=74.4
Q ss_pred CCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEe-ecceeceEEEcCCCCCCeEEEEEEEEcCC
Q psy8771 198 LTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEI-SGIITTYYTVRNLSPYTEYEFYIIAVNNL 276 (904)
Q Consensus 198 ~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~-~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~ 276 (904)
++.|.+|.+|++...+.+++.|+|.++.+.+.+|.|.|+..++ .+..+ .....++++|.+|+|++.|.|+|+|.|..
T Consensus 5 ~t~p~~P~~l~v~~~~~~sv~lsW~~p~~~i~~Y~i~y~~~~~--~~~~~~~~~~~ts~~l~~L~p~t~Y~~~V~A~~~~ 82 (105)
T 2cum_A 5 SSGLEAPRDLEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGG--QTQEILLPGGITSHQLLGLFPSTSYNARLQAMWGQ 82 (105)
T ss_dssp CTTCCCCEEEEEESCCSSCEEEEEECCSSCCSEEEEEEECTTS--CEEEEEECSSCSEEEECSCCTTCEEEEEEEEEBTT
T ss_pred ccCCCCCCceEEEeccCCEEEEEEcCCCCccceEEEEEEeCCC--ceEEEEECCCccEEEECCCCCCCEEEEEEEEEeCC
Confidence 4789999999999999999999999998889999999987533 33332 34556899999999999999999999999
Q ss_pred CCCCCCCCeEEecCCC
Q psy8771 277 GRGPPSSPAVITTGET 292 (904)
Q Consensus 277 g~s~~s~~~~~~t~~~ 292 (904)
|.+.+.. ..+.+...
T Consensus 83 g~s~~~~-~~~~T~~~ 97 (105)
T 2cum_A 83 SLLPPVS-TSFTTGGL 97 (105)
T ss_dssp BCCCCEE-EEEECCCS
T ss_pred cccCCEE-EEEEeCCc
Confidence 8876533 44555443
No 372
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.12 E-value=5.1e-10 Score=118.04 Aligned_cols=201 Identities=13% Similarity=0.104 Sum_probs=114.5
Q ss_pred eecccccccccceEEEEeeeccCC-eeeeeeeeccCCCCCCCCeEE--cCCCCceEEecC---CCeEEEEE-EccCCCCe
Q psy8771 64 ITHPPTRAARSHARLAAQSVLRRG-RLAHAVRQVADPVRRVPPQFS--IPPPALLEVMLD---SPLNLSCV-AVGSPMPF 136 (904)
Q Consensus 64 i~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~v~~~~~~~~P~~~--~~~~~~~~~~~g---~~~~l~C~-~~g~p~p~ 136 (904)
+....+...|.....|.......| ....+.+.|. .+|.+. ..+.. +.+.+| +.+.|.|. +.|.|.|.
T Consensus 94 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~-----~~p~~~~~~~~~~-~~~~~g~~~~~~~l~C~~~~~~p~~~ 167 (331)
T 3u83_A 94 IRLSRLELEDEGVYICEFATFPTGNRESQLNLTVM-----AKPTNWIEGTQAV-LRAKKGQDDKVLVATCTSANGKPPSV 167 (331)
T ss_dssp EEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE-----BCCEEEEEECSSC-EEECTTCCCCEEEEEEEEEEEBSCCE
T ss_pred EEEcccCcccCcEEEEEEEecCCCccEEEEEEEEe-----cCCcceeecCCCc-eeecCCCccceEEEEEEecCCcCCce
Confidence 444444445555555553433333 3334444443 355552 24445 888888 77999997 88999999
Q ss_pred EEEeeCCccccCCCCceee------cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceE
Q psy8771 137 VKWRKGQNIELTPDDKLPV------GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVK 208 (904)
Q Consensus 137 i~W~k~~~~~~~~~~~~~~------~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~ 208 (904)
|.|+|+..... ....... -...|.|..+ +|+|.|+|.|.|..|..+..+.|.|..... ... .++....
T Consensus 168 i~W~~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~--~~~-~~~~~~~ 243 (331)
T 3u83_A 168 VSWETRLKGEA-EYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPE--VTI-EGFDGNW 243 (331)
T ss_dssp EEEEESSCCEE-EEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEE--EEE-ECCCSCC
T ss_pred EEEEcCCCCcc-ccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCe--EEE-ecCCCce
Confidence 99999622111 1111111 1245777766 699999999999999888888888762211 110 0111111
Q ss_pred EEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEc-CCCCCCeEEEEEEEEcCCCCC
Q psy8771 209 ISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVR-NLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 209 ~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~-~L~p~~~Y~~~v~a~n~~g~s 279 (904)
+ .....++|.+...+.+... .+.|...+....... ......+.|. ++...+.+.|+|.|.|..|..
T Consensus 244 ~--~~g~~~~l~C~~~g~p~p~-~i~W~~~~~~~~~~~--~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G~~ 310 (331)
T 3u83_A 244 Y--LQRMDVKLTCKADANPPAT-EYHWTTLNGSLPKGV--EAQNRTLFFKGPINYSLAGTYICEATNPIGTR 310 (331)
T ss_dssp B--TTCCCEEEEEEEEEESCCC-EEEEEETTBSCCTTE--EEETTEEEECSCCCGGGCEEEEEEEEETTEEE
T ss_pred E--eCCCeEEEEEeCcCCCCCC-EEEEEECCCcccccc--eecCcEEEEeCCCccccCeEEEEEEEeccccc
Confidence 1 1124455555543222211 134443322111101 1123579999 899999999999999999864
No 373
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.11 E-value=1.2e-09 Score=106.98 Aligned_cols=149 Identities=17% Similarity=0.227 Sum_probs=105.3
Q ss_pred CCCCcEEEeccCCceEEEEeCCC-----CCCCceecccccccccceEEEEeeeccCCe-eeeeeeeccCCC---------
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPE-----TPNGQITHPPTRAARSHARLAAQSVLRRGR-LAHAVRQVADPV--------- 100 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~-----~~~g~i~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~~--------- 100 (904)
....|.|...+.+.+.|.|.+.. ..++.+........+...+.|...+..... ...+.+.+....
T Consensus 34 ~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~ 113 (218)
T 3k0w_A 34 QFVKLCCRATGHPFVQYQWFKMNKEIPNGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDG 113 (218)
T ss_dssp SBEEEECEETTTTSSEEEEEETTEECTTCCSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCS
T ss_pred CcEEEEeeecCCCCCEEEEEECCEECCCCCCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCccccccccc
Confidence 56667777777778899997753 223445555555556555556555443322 223444443221
Q ss_pred -CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771 101 -RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS 177 (904)
Q Consensus 101 -~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n 177 (904)
...+|.+...+.. ..+..|+.+.|.|.+.|.|.+.|.|+++ +..+... ....|.|.++ +|+|.|+|.|.|
T Consensus 114 ~~~~~p~~~~~~~~-~~v~~G~~v~L~C~~~g~p~~~v~W~~~-~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n 186 (218)
T 3k0w_A 114 VSESKLQICVEPTS-QKLMPGSTLVLQCVAVGSPIPHYQWFKN-ELPLTHE-----TKKLYMVPYVDLEHQGTYWCHVYN 186 (218)
T ss_dssp BCCSSCEEEECCCC-EEECTTCCEEEECEEEBSSCCEEEEEET-TEECTTC-----CSSEEEESSCCGGGCEEEEEEEEC
T ss_pred ccCCCceEEECCCc-eeecCCCcEEEEEEecccCCCeEEEEEC-CEECCCC-----CCCEEEEeecChhcCEEEEEEEEc
Confidence 1234788888888 9999999999999999999999999999 6665443 3458999998 699999999999
Q ss_pred cCcc-eEEEEEEEEE
Q psy8771 178 VLGV-IETSTIVKVQ 191 (904)
Q Consensus 178 ~~g~-~~~~~~l~v~ 191 (904)
..|. .+..+.|.|.
T Consensus 187 ~~g~~~s~~~~l~V~ 201 (218)
T 3k0w_A 187 DRDSQDSKKVEIIID 201 (218)
T ss_dssp SSCEEECCCEEEEEC
T ss_pred CCCCceeeeEEEEEe
Confidence 8887 5566677776
No 374
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.11 E-value=2.7e-10 Score=98.91 Aligned_cols=87 Identities=22% Similarity=0.308 Sum_probs=69.4
Q ss_pred CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--------cceEEEEeee--cCCe
Q psy8771 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--------GRNVLTLDRV--TESE 169 (904)
Q Consensus 100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--------~~~~l~i~~l--~d~g 169 (904)
.+..||.|...... . ......|.|.+.|.|.|.|.|+|+ |..+....+... ..+.|.|.++ +|+|
T Consensus 4 ~V~~pP~i~~~~~~--~--~~~~~~l~C~~~g~P~p~i~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 78 (118)
T 1wwc_A 4 TVYYPPRVVSLEEP--E--LRLEHCIEFVVRGNPPPTLHWLHN-GQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNG 78 (118)
T ss_dssp CCCCCCCCCCCCCC--C--CCCEEEEEEEEECSSCCEEEEEET-TEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCE
T ss_pred EEecCCceeccCCC--e--eccceEEEEEeeeeCCCeEEEEEC-CEECCCCCceeEEEeccCccccEEEEECCCChhcCE
Confidence 45678887665443 2 226678999999999999999999 777766654443 3568999999 6999
Q ss_pred EEEEEEEecCcceEEEEEEEEE
Q psy8771 170 NYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 170 ~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
.|+|.|.|..|..++++.|.|.
T Consensus 79 ~Y~C~a~N~~G~~~~~~~l~v~ 100 (118)
T 1wwc_A 79 NYTLIAKNPLGTANQTINGHFL 100 (118)
T ss_dssp EEEEEEEETTEEEEEEEEECCS
T ss_pred EEEEEEECCCCeEeeEEEEEEc
Confidence 9999999999999998888777
No 375
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.11 E-value=2.7e-10 Score=96.14 Aligned_cols=90 Identities=26% Similarity=0.399 Sum_probs=75.3
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec-ce---EEEEeee--cCCeEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG-RN---VLTLDRV--TESENYTCIA 175 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~-~~---~l~i~~l--~d~g~Y~c~a 175 (904)
..||.|...+.+ +.+.+|+++.|.|. .|.|.+.|.|+|+ +..+..+.++.+. ++ .|.|.++ +|+|.|+|.
T Consensus 6 ~~pp~~~~~~~~-~~v~~G~~v~l~C~-~~~p~~~v~W~k~-~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~- 81 (103)
T 2dku_A 6 SGANCFTEELTN-LQVEEKGTAVFTCK-TEHPAATVTWRKG-LLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD- 81 (103)
T ss_dssp CCCCCCSSCCCC-EEEETTSEEEEEEE-CSSCCSCCEEEES-SCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE-
T ss_pred CCCCEeEecCCc-EEEeCCCcEEEEEE-eCCCCCeEEEEeC-CEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE-
Confidence 467889888888 99999999999999 5999999999999 7777776676653 33 8999999 699999998
Q ss_pred EecCcceEEEEEEEEEeecCCCCCCCCCCc
Q psy8771 176 ASVLGVIETSTIVKVQCKYAPLLTLPVAPL 205 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~ 205 (904)
.|.....+.|.|. ..|.+|.
T Consensus 82 ---~g~~~~~~~l~V~-------~~p~~p~ 101 (103)
T 2dku_A 82 ---IGQAQSRAQLLVQ-------GRRSGPS 101 (103)
T ss_dssp ---CSSCBCCEEEEEE-------CSCCCCS
T ss_pred ---eCCceEEEEEEEe-------CccCCCC
Confidence 6777888999998 6666653
No 376
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=99.11 E-value=2.7e-10 Score=95.05 Aligned_cols=82 Identities=26% Similarity=0.391 Sum_probs=67.6
Q ss_pred CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT 796 (904)
Q Consensus 718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~ 796 (904)
.+|.+|++..++.+++.|+|++|. +.+.+|.|+|+..+..... ....+. ..+.++|.+|+|++.|.|+|+|.|
T Consensus 3 ~~P~~l~~~~~~~~sv~lsW~pP~-----~~i~~Y~v~y~~~~~~~~~-~~~~~~~~~t~~~i~~L~p~t~Y~~~V~A~n 76 (100)
T 3b83_A 3 QPPFNIKVTNITLTTAVVTWQPPI-----LPIEGILVTFGRKNDPSDE-TTVDLTSSITSLTLTNLEPNTTYEIRIVARN 76 (100)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCS-----SCCSEEEEEEEESSCTTTC-EEEEECTTEEEEEECSCCTTCEEEEEEEEEE
T ss_pred ccCCccEEEEecCCEEEEEEcCCc-----ccCCEEEEEEEECCCCCCc-eEEEECCcceEEEECCCCCCCEEEEEEEEEe
Confidence 368999999999999999999984 2589999999977643222 233445 889999999999999999999999
Q ss_pred CCCCCCCCC
Q psy8771 797 SIGDGPSSY 805 (904)
Q Consensus 797 ~~g~g~~s~ 805 (904)
..|.|.++.
T Consensus 77 ~~g~s~p~~ 85 (100)
T 3b83_A 77 GQQYSPPVS 85 (100)
T ss_dssp TTEECCCEE
T ss_pred CCCCCCCEE
Confidence 999887665
No 377
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.11 E-value=3.4e-10 Score=106.68 Aligned_cols=153 Identities=14% Similarity=0.109 Sum_probs=100.3
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC-eEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEec
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP-FVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASV 178 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p-~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~ 178 (904)
..+|.|...|.. +.+.+|++++|.|.+.|.|.+ .+.|+|+ +..+.. .++.|.|.++ +|+|.|+|.+.|.
T Consensus 2 ~~~P~i~~~p~~-~~v~~G~~v~L~C~~~~~~~~~~i~W~~~-~~~~~~------~~~~L~i~~v~~~d~G~Y~C~~~~~ 73 (176)
T 1f2q_A 2 PQKPKVSLNPPW-NRIFKGENVTLTCNGNNFFEVSSTKWFHN-GSLSEE------TNSSLNIVNAKFEDSGEYKCQHQQV 73 (176)
T ss_dssp --CCCCEEESSC-SEEETTCCEEEECCTTCC----CCEEEET-TEECSC------CSSEEEECSCCGGGCEEEEEECTTS
T ss_pred CCCCEEEcCCCC-cceecCCcEEEEEeCCCCCCcceEEEEEC-CeECCC------CceEEEEeccceecCEEEEEEcCCc
Confidence 346778888887 899999999999999999986 6999999 655543 4678999999 6999999999886
Q ss_pred CcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC-CccceEEEEEEEeCCCCCCeEEeecceeceEEE
Q psy8771 179 LGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEISGIITTYYTV 257 (904)
Q Consensus 179 ~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i 257 (904)
.+. ....|.|. ..+.... ++ ...+ .....++|.+... +.+. -.+.|...+... ........+.|
T Consensus 74 ~~s--~~~~l~V~--~~~~~~~--~~-~~~~--~~g~~~~l~C~~~~~~p~--~~~~W~~~g~~~----~~~~~~~~L~i 138 (176)
T 1f2q_A 74 NES--EPVYLEVF--SDWLLLQ--AS-AEVV--MEGQPLFLRCHGWRNWDV--YKVIYYKDGEAL----KYWYENHNISI 138 (176)
T ss_dssp SCC--CCEEEEEE--CSSEEEE--ES-CSEE--ETTSCEEEEEEEGGGCCE--EEEEEEETTEEC----CSCCCSSEEEE
T ss_pred ccc--ccEEEEEe--Ccceeec--CC-ccee--eCCCCEEEEEEecCCCCc--eEEEEEECCEEE----eeecCCCeEEE
Confidence 654 44556665 1100000 11 1122 2345667777653 2222 334554432111 11223478999
Q ss_pred cCCCCCCeEEEEEEEEcCCC
Q psy8771 258 RNLSPYTEYEFYIIAVNNLG 277 (904)
Q Consensus 258 ~~L~p~~~Y~~~v~a~n~~g 277 (904)
.++...+.+.|+|.|.|..+
T Consensus 139 ~~v~~~d~G~Y~C~a~n~~~ 158 (176)
T 1f2q_A 139 TNATVEDSGTYYCTGKVWQL 158 (176)
T ss_dssp SSCCGGGCEEEEEEEEETTE
T ss_pred CCCCcccCEEEEEEEEeCCc
Confidence 99999999999999999744
No 378
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.11 E-value=6.7e-10 Score=114.51 Aligned_cols=153 Identities=16% Similarity=0.168 Sum_probs=105.2
Q ss_pred CCCCcEEEeccCCceE-EEEeCCC------------CCCCceecccccccccceEEEEeeeccCCee-eeeeeeccCCCC
Q psy8771 36 APRDVQVRPLSSSTMV-IQWDEPE------------TPNGQITHPPTRAARSHARLAAQSVLRRGRL-AHAVRQVADPVR 101 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~-v~W~~~~------------~~~g~i~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~~~v~~~~~ 101 (904)
....|.|...+.+... +.|.... ..++.++.......+.....|...+...+.. ..+.+.+.. ..
T Consensus 105 ~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~-~~ 183 (289)
T 3ejj_X 105 QEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNR-VH 183 (289)
T ss_dssp SCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEES-SC
T ss_pred CceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEE-CC
Confidence 5666777766655544 9996421 1133344444444455445555553333332 233444432 12
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEcc-CCCCeEEEeeCCccccCCCCce------eecceEEEEeee--cCCeEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPMPFVKWRKGQNIELTPDDKL------PVGRNVLTLDRV--TESENYT 172 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p~i~W~k~~~~~~~~~~~~------~~~~~~l~i~~l--~d~g~Y~ 172 (904)
..+|.|...+.. ..+.+|+.+.|.|.+.| .|.+.|.|+++ +..+...... ....+.|.|.++ +|+|.|+
T Consensus 184 ~~~p~i~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~i~W~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~ 261 (289)
T 3ejj_X 184 PEPPQIKLEPSK-LVRIRGEAAQIVCSATNAEVGFNVILKRG-DTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYS 261 (289)
T ss_dssp CCCCEEEEESSS-EECCSSSCEEEEEEEEESSSCCEEEEEET-TEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEE
T ss_pred CCCCeEEecCCc-eEEEeCCcEEEEEEeCCCCCceEEEEEEC-CEEeeccCCcccccceEEeeEEEEEEeecccCCEEEE
Confidence 478999888887 88889999999999999 79999999999 6666543221 224678999998 6999999
Q ss_pred EEEEecCcceEEEEEEEEE
Q psy8771 173 CIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 173 c~a~n~~g~~~~~~~l~v~ 191 (904)
|.|.|..|..++++.|.+.
T Consensus 262 C~a~N~~G~~~~s~~L~~~ 280 (289)
T 3ejj_X 262 CVASNDVGTRTATMNFQVV 280 (289)
T ss_dssp EEEECSSCEEEEEEEEECC
T ss_pred EEEEcCCCCccccEEEEEE
Confidence 9999999999999998877
No 379
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.10 E-value=2.8e-10 Score=97.12 Aligned_cols=88 Identities=14% Similarity=0.229 Sum_probs=69.4
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCcccc-------CCCCceee-----cceEEEEeee--cC
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIEL-------TPDDKLPV-----GRNVLTLDRV--TE 167 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~-------~~~~~~~~-----~~~~l~i~~l--~d 167 (904)
..+|.+...|.+ +.+.+|++++|.|.+.|.|.+.|.|+|++...+ ....|+.+ .+.+|.|.++ +|
T Consensus 4 ~~~p~~~~~~~~-~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 82 (108)
T 3m45_A 4 KGSQGQFPLTQN-VTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSD 82 (108)
T ss_dssp ----CCCEECCC-EEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGG
T ss_pred ccCCCccccCCe-eEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhH
Confidence 345667777777 999999999999999999999999999743121 12335554 4678999999 69
Q ss_pred CeEEEEEEEecCcceEEEEEEEEE
Q psy8771 168 SENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 168 ~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
+|.|+|.|.| .|..+..+.|.|.
T Consensus 83 ~G~Y~C~~~n-~~~~~~~~~L~V~ 105 (108)
T 3m45_A 83 EGQYTCSLFT-MPVKTSKAYLTVL 105 (108)
T ss_dssp CEEEEEEECS-SSCEEEEEEEEEE
T ss_pred CeEEEEEEEc-CCCcEEEEEEEEE
Confidence 9999999999 8888899999988
No 380
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.10 E-value=4.6e-10 Score=92.04 Aligned_cols=81 Identities=26% Similarity=0.469 Sum_probs=66.9
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGV 181 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~ 181 (904)
++.|...|.. ..+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+... ..+.|.|.++ +|+|.|+|.|.|..|.
T Consensus 3 ~~~i~~~p~~-~~v~~G~~~~l~C~~~g~p~p~i~W~~~-~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~g~ 75 (91)
T 3bfo_A 3 KLQICVEPTS-QKLMPGSTLVLQCVAVGSPIPHYQWFKN-ELPLTHE-----TKKLYMVPYVDLEHQGTYWCHVYNDRDS 75 (91)
T ss_dssp CCEEEECCCC-EEECTTSCEEEECEEECSSCCEEEEEET-TEECTTC-----CSSEEEESSCCGGGCEEEEEEEECSSCE
T ss_pred ceEEEECCCc-cEecCCCcEEEEEEeccCCCCEEEEEcC-CeeCCcC-----CCCeEEECCCCHHhCEEEEEEEEcCCCC
Confidence 5678888888 8999999999999999999999999999 6555433 2468999999 7999999999999997
Q ss_pred eE-EEEEEEEE
Q psy8771 182 IE-TSTIVKVQ 191 (904)
Q Consensus 182 ~~-~~~~l~v~ 191 (904)
.. ..+.|.|.
T Consensus 76 ~~s~~~~l~V~ 86 (91)
T 3bfo_A 76 QDSKKVEIIID 86 (91)
T ss_dssp EECCCEEEEEC
T ss_pred EEeeeEEEEEe
Confidence 54 44555554
No 381
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.10 E-value=4.5e-10 Score=94.87 Aligned_cols=65 Identities=17% Similarity=0.072 Sum_probs=47.3
Q ss_pred CceeeEEEEEEeCCcc----------ccceEEecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCC
Q psy8771 649 ENIISYELYWNDTYAK----------AKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQY 714 (904)
Q Consensus 649 ~~~~~y~v~~~~~~~~----------~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~ 714 (904)
+.+.+|+|+|...++. .......+..++++|.+|.|++.|.|+|+|++..|.+.+. .....|...
T Consensus 34 g~v~~Y~i~y~~~~~~~~e~~~~~~~~~~~~v~~~~t~~~l~gL~PgT~Y~~~V~A~~~~~~s~p~-~~~~~T~~~ 108 (112)
T 2cui_A 34 GAFDSFLLRFGVPSPSTLEPHPRPLLQRELMVPGTRHSAVLRDLRSGTLYSLTLYGLRGPHKADSI-QGTARTLSG 108 (112)
T ss_dssp TSCSEEEEEEECCCCSSSCCCSSCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEECSSSEEEEE-EEEEECCCC
T ss_pred CCccEEEEEEEeCCCCccccccccCcceEEEcCCCcCEEEeCCCCCCCEEEEEEEEEECCcccCCE-EEEEEECCC
Confidence 4688999999877543 1233444567899999999999999999999987765433 345555543
No 382
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=99.09 E-value=1.9e-10 Score=98.06 Aligned_cols=96 Identities=31% Similarity=0.491 Sum_probs=70.7
Q ss_pred CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEE
Q psy8771 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVL 793 (904)
Q Consensus 715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~ 793 (904)
+|. +|.+|.+...+.+++.|+|++| +|.+.+|.|.|+..++... .....+. ..++++|.+|.|++.|.|+|+
T Consensus 3 vP~-~P~~L~v~~~t~~Sv~lsW~~p-----~g~i~~Y~v~y~~~~~~~~-~~~~~v~~~~ts~~l~gL~P~T~Y~v~V~ 75 (114)
T 3qwq_B 3 VSD-VPRDLEVVAATPTSLLISWDSG-----RGSYQYYRITYGETGGNSP-VQEFTVPGPVHTATISGLKPGVDYTITVY 75 (114)
T ss_dssp --C-CCEEEEEEEEETTEEEEEEECC-----SCCCSEEEEEEEESSCSSC-CEEEEEETTCCEEEECSCCTTCEEEEEEE
T ss_pred CCC-CCCceEEEecCCCEEEEEEcCC-----cCcccEEEEEEEECCCCCc-cEEEEeCCCcCEEEeCCCCCCCEEEEEEE
Confidence 455 6899999999999999999987 2679999999998765432 2334455 889999999999999999999
Q ss_pred EeeCCC---CCCC-----CCcEEeecCCCCCC
Q psy8771 794 AGTSIG---DGPS-----SYPITIRTHEDDPS 817 (904)
Q Consensus 794 a~~~~g---~g~~-----s~~~~~~t~~~~P~ 817 (904)
|.+..| .... ...+.|+|....|+
T Consensus 76 A~~~~G~~~~~~~T~~~~P~~l~~~T~~~~~~ 107 (114)
T 3qwq_B 76 AVTDHKPHADGPHTYHESPISINYRTEIDKPS 107 (114)
T ss_dssp EEEEEESSTTSCCEEEEEEEEEEEECCCC---
T ss_pred EEECCccEEEEeEcCCCCCceeEEEeccCCcc
Confidence 999888 2111 11245667666554
No 383
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.09 E-value=3.3e-09 Score=105.08 Aligned_cols=174 Identities=9% Similarity=0.063 Sum_probs=112.1
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCC---CCceeecceEEEEeee--cCCeEEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTP---DDKLPVGRNVLTLDRV--TESENYTCIAA 176 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~---~~~~~~~~~~l~i~~l--~d~g~Y~c~a~ 176 (904)
..+|.|...|.. .+.+|++++|.|.+.+. .+.+.|+|+ +..+.. ........+.|.|.++ +|+|.|+|.+.
T Consensus 5 ~~kP~i~~~P~~--~v~~G~~VtL~C~~~~~-~~~~~w~k~-g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 80 (242)
T 1p6f_A 5 LPKPFIWAEPHF--MVPKEKQVTICCQGNYG-AVEYQLHFE-GSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYR 80 (242)
T ss_dssp CCCCEEEEESCS--EEETTCCEEEEEECCTT-CCEEEEEET-TEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCCCEEEeeCCC--ccCCCCcEEEEEeeCCC-CcEEEEEEC-CCccccccccccCCcceeEEEecCCCcccCeEEEEEEe
Confidence 456888877764 78899999999999764 467999999 543321 1111235678999998 69999999998
Q ss_pred ecCcc--eEEEEEEEEEeecCCCCCCCCCCcceEE----EeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecc
Q psy8771 177 SVLGV--IETSTIVKVQCKYAPLLTLPVAPLDVKI----SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGI 250 (904)
Q Consensus 177 n~~g~--~~~~~~l~v~~~~~~~~~~P~~p~~l~~----~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~ 250 (904)
|..+. .+....|.|. ..+.+|. +.+ .......++|.+...... ..| .|...+...........
T Consensus 81 ~~~~~s~~S~~~~L~V~-------~~~~~P~-i~~~p~~~v~~G~~vtL~C~~~~~~-~~~--~w~k~g~~~~~~~~~~~ 149 (242)
T 1p6f_A 81 VGELWSEPSNLLDLVVT-------EMYDTPT-LSVHPGPEVISGEKVTFYCRLDTAT-SMF--LLLKEGRSSHVQRGYGK 149 (242)
T ss_dssp ETTEECCCCCCEEEEEE-------CCSCCCE-EEEESCSEEETTCEEEEEEECTTSC-SEE--EEEECSSSCEEEEEECS
T ss_pred cCCccccCCcceEEEee-------cccCCCc-eEccCCCccCCCCcEEEEEecCCCC-CEE--EEEECCCccCccccCCC
Confidence 86553 2445667776 3222222 111 113456788888876433 233 34443322222222234
Q ss_pred eeceEEEcCCCCCCeEEEEEEEEcCC-CCCCCCCCeEEecC
Q psy8771 251 ITTYYTVRNLSPYTEYEFYIIAVNNL-GRGPPSSPAVITTG 290 (904)
Q Consensus 251 ~~~~~~i~~L~p~~~Y~~~v~a~n~~-g~s~~s~~~~~~t~ 290 (904)
....|.|.+++..+.+.|+|.|.|.. ..+..+..+.+...
T Consensus 150 ~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 190 (242)
T 1p6f_A 150 VQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 190 (242)
T ss_dssp SEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEE
T ss_pred ceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEe
Confidence 45789999999999999999999874 23445666665543
No 384
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.09 E-value=1.1e-09 Score=112.88 Aligned_cols=148 Identities=11% Similarity=0.149 Sum_probs=95.1
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCCCCc-eec------ccccccccceEEEEeeeccCCeeee-eeeeccCCCCCCCCeE
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETPNGQ-ITH------PPTRAARSHARLAAQSVLRRGRLAH-AVRQVADPVRRVPPQF 107 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~~g~-i~~------~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~v~~~~~~~~P~~ 107 (904)
....|.|... .+.+.++|..... |. +.. ..+...+.....|...+...+..+. ..+.+.. ..+|.+
T Consensus 111 ~~v~l~C~~~-~p~~~v~w~~~~~--~~~~~~~~~~~~~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~---~~~p~i 184 (289)
T 3mjg_X 111 TEITIPCRVT-DPQLVVTLHEKKG--DVALPVPYDHQRGFSGIFEDRSYICKTTIGDREVDSDAYYVYRLQ---VSSINV 184 (289)
T ss_dssp CCEEECCCBS-CTTSCEEEEESSC--CSCCCCCEETTTEEEECCCSSEEEEEEEETTEEEECCCEEEEECC---CCCCCC
T ss_pred CeEEEEeEcC-CCCceEEEEeCCC--CCccceeecCCcCeeeeccCcEEEEEEEeCCceeeeeeEEEEecC---CCCCCc
Confidence 5555666554 4455666655431 11 100 0012234444455554433333332 2344332 257777
Q ss_pred EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC-Cc---e-----eecceEEEEeee--cCCeEEEEEEE
Q psy8771 108 SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD-DK---L-----PVGRNVLTLDRV--TESENYTCIAA 176 (904)
Q Consensus 108 ~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~---~-----~~~~~~l~i~~l--~d~g~Y~c~a~ 176 (904)
...+.+ ..+.+|+.++|.|.+.|.|.|.|.|+++ +...... .. . ......|.|.++ +|+|.|+|.|.
T Consensus 185 ~~~~~~-~~v~~G~~v~L~C~~~g~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 262 (289)
T 3mjg_X 185 SVNAVQ-TVVRQGENITLMCIVIGNEVVNFEWTYP-RKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVT 262 (289)
T ss_dssp EEEESC-SEEETTSCEEEEEEEESCSSBEEEEECT-TSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEE
T ss_pred EEeCCc-ceeEcCCCEEEEEEECCCCCcceEEEcC-CccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEee
Confidence 777777 8899999999999999999999999987 3322111 11 1 113468999999 69999999999
Q ss_pred ecCcceEEEEEEEEE
Q psy8771 177 SVLGVIETSTIVKVQ 191 (904)
Q Consensus 177 n~~g~~~~~~~l~v~ 191 (904)
|..|....++.|.|.
T Consensus 263 N~~G~~~~~~~l~v~ 277 (289)
T 3mjg_X 263 ESVNDHQDEKAINIT 277 (289)
T ss_dssp ETTTTEEEEEEEEEE
T ss_pred cCCCCceeEEEEEEE
Confidence 999999999999998
No 385
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.09 E-value=9.3e-10 Score=107.36 Aligned_cols=156 Identities=11% Similarity=0.067 Sum_probs=97.6
Q ss_pred ecCCCeEEEEEEccC-CCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771 118 MLDSPLNLSCVAVGS-PMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV 190 (904)
Q Consensus 118 ~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v 190 (904)
-.++.+.|.|.+.|. |.+.|+|+|+ +..+....++.+ +...|.|.++ +|+|.|+|.|.|..|.......|.+
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~-g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v 93 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHN-GSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSG 93 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEET-TEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECH
T ss_pred EcCceEEEEEEEeccCCCceEEEEEC-CEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEE
Confidence 366778888888885 5899999999 777777666654 2246999999 6999999999998888777666654
Q ss_pred Eee------------------cCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCC----CCCCeEEee
Q psy8771 191 QCK------------------YAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKA----ANTPYSEIS 248 (904)
Q Consensus 191 ~~~------------------~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~----~~~~~~~~~ 248 (904)
... ..+... ...|..+.+. ....+.|.+...+.+... +.|...+ ....+....
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~v~--~g~~~~l~C~~~g~p~p~--v~W~~~~~~~~~~~~~~~~~ 168 (212)
T 2r15_A 94 QAYDEAYAEFQRLKQAAIAEKNRARVL-GGLPDVVTIQ--EGKALNLTCNVWGDPPPE--VSWLKNEKALAQTDHCNLKF 168 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCEEE-EBCCSEEEEE--TTCCEEEEEEEECSSCCE--EEEEETTEEECCCSSEEEEE
T ss_pred eeccchhhhccccCcccccccCCCccc-ccCCCcEEEc--cCCeEEEEEEEcCCCCce--EEEEECCeECccCCCEEEEE
Confidence 310 000000 0122233332 233455555443322222 3343322 111222221
Q ss_pred c-ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 249 G-IITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 249 ~-~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
. .....+.|.++...+.+.|+|.|.|..|..
T Consensus 169 ~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~ 200 (212)
T 2r15_A 169 EAGRTAYFTINGVSTADSGKYGLVVKNKYGSE 200 (212)
T ss_dssp ETTTEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred cCCCEEEEEEcCcchHHCeEEEEEEEcCCCcE
Confidence 1 334689999999999999999999998864
No 386
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.09 E-value=7.2e-10 Score=92.42 Aligned_cols=86 Identities=17% Similarity=0.318 Sum_probs=67.3
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCc
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLG 180 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g 180 (904)
+|.+...+...+.+.+|++++|.|.+. |.|.+.|.|+|+ +...... +....++.|.|.++ +|+|.|+|.|.|..|
T Consensus 9 ~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~-~~~~~~~-~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 86 (98)
T 1gl4_B 9 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRL-HNGKLPS-RAMDFNGILTIRNVQPSDAGTYVCTGSNMFA 86 (98)
T ss_dssp CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEG-GGBCCCT-TEEEETTEEEECSCCGGGCEEEEEEEECSSC
T ss_pred CcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeC-CCCCCCc-eeecCCCEEEEeCCChhhCEEEEEEecCCCC
Confidence 344444333338999999999999999 799999999998 3333222 33445679999999 699999999999999
Q ss_pred ceEEEEEEEEE
Q psy8771 181 VIETSTIVKVQ 191 (904)
Q Consensus 181 ~~~~~~~l~v~ 191 (904)
..+..+.|.|+
T Consensus 87 ~~~~~~~l~V~ 97 (98)
T 1gl4_B 87 MDQGTATLHVQ 97 (98)
T ss_dssp EEEEEEEEEEC
T ss_pred ccccEEEEEEe
Confidence 98888888875
No 387
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.09 E-value=2e-09 Score=102.98 Aligned_cols=148 Identities=14% Similarity=0.162 Sum_probs=99.7
Q ss_pred CCCCcEEEeccCC-ceEEEEeCCCC-----CC------------CceecccccccccceEEEEeeeccCCe-eeeeeeec
Q psy8771 36 APRDVQVRPLSSS-TMVIQWDEPET-----PN------------GQITHPPTRAARSHARLAAQSVLRRGR-LAHAVRQV 96 (904)
Q Consensus 36 ~p~~l~~~~~~~~-s~~v~W~~~~~-----~~------------g~i~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~v 96 (904)
....|.|...+.+ ...+.|.+... .+ +.++.......+.....|...+...+. ...+.+.+
T Consensus 18 ~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v 97 (191)
T 1epf_A 18 ESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKI 97 (191)
T ss_dssp CCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEE
T ss_pred CCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceEEEEEEEe
Confidence 4555666665654 78999987211 11 123333344445555555555544332 22333333
Q ss_pred cCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccC--CCCceee-cceEEEEeee--cCCeEE
Q psy8771 97 ADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT--PDDKLPV-GRNVLTLDRV--TESENY 171 (904)
Q Consensus 97 ~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~--~~~~~~~-~~~~l~i~~l--~d~g~Y 171 (904)
..+|.+...+.. ..+.+|+.+.|.|.+.|.|.|.|.|+++ +..+. ...++.. .++.|.|.++ +|+|.|
T Consensus 98 -----~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 170 (191)
T 1epf_A 98 -----FQKLMFKNAPTP-QEFKEGEDAVIVCDVVSSLPPTIIWKHK-GRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTY 170 (191)
T ss_dssp -----ECCSEEEECCSS-EECCTTSCEEECCEEECSSCCEEEEEET-TEEGGGGCCTTEEECTTSCEEETTCCGGGCEEE
T ss_pred -----ecCceEecCCCc-EeecCCCeEEEEEEECCCCCCEEEEEEC-CEEeeccCCceEEEecCCeEEECCCChhhCEEE
Confidence 467888888887 8999999999999999999999999999 55543 2334443 5678999999 699999
Q ss_pred EEEEEecCcceEEEEEEEE
Q psy8771 172 TCIAASVLGVIETSTIVKV 190 (904)
Q Consensus 172 ~c~a~n~~g~~~~~~~l~v 190 (904)
+|.|.|..|.......+.|
T Consensus 171 ~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 171 RCEGRILARGEINFKDIQV 189 (191)
T ss_dssp EEEEEEGGGTEEEEEEEEE
T ss_pred EEEEEEecceeEEEEEEEE
Confidence 9999999876555555544
No 388
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=99.09 E-value=1.9e-10 Score=99.30 Aligned_cols=93 Identities=25% Similarity=0.349 Sum_probs=70.2
Q ss_pred EecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceE
Q psy8771 710 RTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEY 788 (904)
Q Consensus 710 ~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y 788 (904)
.+....|..+|.+|.+...+.+++.|+|++|. +.+.+|.|.|+..++... .....+. ..+.++|.+|+|++.|
T Consensus 22 ~~~~~tp~~~P~~l~v~~~t~~Si~lsW~~p~-----~~i~~Y~V~y~~~~~~~~-~~~~~v~~~~t~~~l~gL~P~t~Y 95 (121)
T 2ocf_D 22 LYFQGSVSDVPTKLEVVAATPTSLLISWDAPA-----VTVRYYRITYGETGGNSP-VQEFTVPGSKSTATISGLKPGVDY 95 (121)
T ss_dssp -------CCSCEEEEEEEECSSCEEEEEECCS-----SCCCEEEEEEEETTTCSC-BEEEEEETTCCEEEECCCCTTCEE
T ss_pred EeeccCCCCCCCccEEEecCCCEEEEEEcCCC-----CCCcEEEEEEEECCCCCc-cEEEEeCCCcCEEEeCCCCCCCEE
Confidence 33444566689999999999999999999984 348999999998765332 2334455 8899999999999999
Q ss_pred EEEEEEeeCCCCCCCC-CcEE
Q psy8771 789 RIWVLAGTSIGDGPSS-YPIT 808 (904)
Q Consensus 789 ~~~V~a~~~~g~g~~s-~~~~ 808 (904)
.|+|+|.+..|.|+.| .++.
T Consensus 96 ~~~V~A~~~~G~g~~Ss~pv~ 116 (121)
T 2ocf_D 96 TITVYAVTGLRLMLAGSKPIS 116 (121)
T ss_dssp EEEEEEECCHHHHHHSCCCCE
T ss_pred EEEEEEEeCCCccCCCCCCEE
Confidence 9999999999987764 3444
No 389
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.09 E-value=3.4e-10 Score=109.40 Aligned_cols=161 Identities=16% Similarity=0.137 Sum_probs=99.4
Q ss_pred CCCCceEEecCCCeEEEEE-EccCCC-CeEEEeeCCccccC--CCCc-ee-ecceEEEEeee--cCCeEEEEEEEecCcc
Q psy8771 110 PPPALLEVMLDSPLNLSCV-AVGSPM-PFVKWRKGQNIELT--PDDK-LP-VGRNVLTLDRV--TESENYTCIAASVLGV 181 (904)
Q Consensus 110 ~~~~~~~~~~g~~~~l~C~-~~g~p~-p~i~W~k~~~~~~~--~~~~-~~-~~~~~l~i~~l--~d~g~Y~c~a~n~~g~ 181 (904)
.+.. +.+.+|+.+.|.|. +.|.|. +.|.|+|+ +..+. ...+ .. ..+++|.|.++ +|+|.|+|.+.|..+.
T Consensus 14 ~~~~-~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~ 91 (201)
T 3s97_C 14 ERPE-VRVKEGKGMVLLCDPPYHFPDDLSYRWLLN-EFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSIT 91 (201)
T ss_dssp CCCC-EEEETTCCEEECCCCCSEESSCCEEEEEES-STTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGT
T ss_pred CCce-EEEECCCCEEEeccccccCCCceEEEEEEC-CceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCC
Confidence 3345 99999999999999 999999 99999999 54442 2222 22 35778999999 6999999999997766
Q ss_pred eEE---EEEEEEEeecCCCCCCCCCCc------ceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeeccee
Q psy8771 182 IET---STIVKVQCKYAPLLTLPVAPL------DVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIIT 252 (904)
Q Consensus 182 ~~~---~~~l~v~~~~~~~~~~P~~p~------~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~ 252 (904)
... ...+.+... ....+.+|. ...+ .....++|.+...+.+.. .+.|...+.............
T Consensus 92 ~~~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~--~~g~~~~l~C~~~g~p~p--~v~W~~~~~~~~~~~~~~~~~ 164 (201)
T 3s97_C 92 KSVFSKFIPLIPIPE---RTTKPYPADIVVQFKDVYA--LMGQNVTLECFALGNPVP--DIRWRKVLEPMPSTAEISTSG 164 (201)
T ss_dssp EEEECCCEEEEEECC---SSCCCEEEEEEEECCCEEE--ETTCCEEEEEEEEEESCC--EEEEEETTBCCCTTCEEETTT
T ss_pred cchhhcccceeeccc---cccCCCCCceEecCCceEE--ecCCcEEEEEEccCCCCC--ceEEEeCCCcCCCceeecCCC
Confidence 543 223333200 001111111 2222 223445665554322222 344444322111000111223
Q ss_pred ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 253 TYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
..+.|.++...+.+.|+|.|.|..|..
T Consensus 165 ~~L~i~~v~~~d~G~Y~C~a~n~~g~~ 191 (201)
T 3s97_C 165 AVLKIFNIQLEDEGIYECEAENIRGKD 191 (201)
T ss_dssp TEEEECSCCGGGCEEEEEEEEETTEEE
T ss_pred CEEEEccCChhhCEEEEEEEEecCCce
Confidence 679999999999999999999998864
No 390
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=99.08 E-value=3.9e-09 Score=104.12 Aligned_cols=186 Identities=13% Similarity=0.169 Sum_probs=122.1
Q ss_pred CCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE---e--ecCceEEEEcC--CCCCCeEE
Q psy8771 481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ---V--VDNNQLTTISD--LTPHTIYT 553 (904)
Q Consensus 481 p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~--L~p~t~Y~ 553 (904)
|..+|.++.....+...+..+|++... .....|.+.|.-..... ..|..- . .+....+.+.. +.....|.
T Consensus 36 ~~~~~~nl~C~~~~~~~l~CtW~~g~~--~~~t~y~l~y~~~~~~~-~~~~~C~~y~~~~g~~~~C~f~~~~~~~~~~y~ 112 (247)
T 2erj_C 36 STLPLPEVQCFVFNVEYMNCTWQSSSE--PQPTNLTLHYWYKNSDN-DKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFV 112 (247)
T ss_dssp -CCCCCCCEEEEETTSEEEEECCTTSS--SSCCCCEEEEEESSSSC-CCCEECCSEEESSSSEEEEEEEGGGCCTTSCEE
T ss_pred CCCCCCCCEEEECCCCEEEEEEcCCCC--CCCeeEEEEEEECCCCC-CcceeCCCccccCCcceEEEeCCCCcceeeEEE
Confidence 445678899988888999999998642 22367888886543210 112111 1 12233555544 44567799
Q ss_pred EEEEEEeCCCCCCCCCcEEEecCC-CCCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEee
Q psy8771 554 IRVQAFTSVGPGPLSAPVLVKTQQ-GVPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDI 632 (904)
Q Consensus 554 ~~V~a~~~~g~~~~S~~~~~~t~~-~~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~ 632 (904)
|.|++ ..|. ..+....+.... ..|.||.+|.+.......+.|+|..|..
T Consensus 113 i~V~~--~~g~-~~s~~~~~~~~~iVkP~PP~nl~v~~~~~~~l~l~W~~P~~--------------------------- 162 (247)
T 2erj_C 113 VQLQD--PREP-RRQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFL--------------------------- 162 (247)
T ss_dssp EEEEC--SSCT-TCEEEEEECGGGSEECCCCEEEEEEESSSSCEEEEEECSSC---------------------------
T ss_pred EEEEE--CCCc-cccceEEEchhHeEEeCCCCeEEEEECCCCcEEEEECCCCC---------------------------
Confidence 88864 3332 223334444332 2478899999998877899999998841
Q ss_pred ccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC------CCCCCCC
Q psy8771 633 QETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG------EGATTPP 706 (904)
Q Consensus 633 ~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G------~~~~s~~ 706 (904)
.....|.|+|+..++..+..........+.|.+|.|++.|.|+|++....| .|++|.+
T Consensus 163 ----------------~~~L~Yevry~~~~~~~W~~~~~~~~~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~~ 226 (247)
T 2erj_C 163 ----------------NHCLEHLVQYRTDWDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHP 226 (247)
T ss_dssp ----------------CTTEEEEEEEECSSCSSCEEEEECSSCEEEESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCCC
T ss_pred ----------------CCcEEEEEEEeeCCCCCCEEEecCCceEEEecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCcC
Confidence 234689999998766666555555567899999999999999999998542 3567777
Q ss_pred eeEEecCCC
Q psy8771 707 IPVRTKQYV 715 (904)
Q Consensus 707 ~~~~t~~~~ 715 (904)
+.+.+....
T Consensus 227 ~~~~t~~~~ 235 (247)
T 2erj_C 227 IHWGSNTSK 235 (247)
T ss_dssp EEECC----
T ss_pred EEEECCCCC
Confidence 777776543
No 391
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.08 E-value=7.3e-11 Score=125.11 Aligned_cols=165 Identities=15% Similarity=0.161 Sum_probs=108.5
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc-eeecceEEEEeee--cCCe-EEEEEEEe
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK-LPVGRNVLTLDRV--TESE-NYTCIAAS 177 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~-~~~~~~~l~i~~l--~d~g-~Y~c~a~n 177 (904)
-.+|.|...|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+++++.......+ ....++.|.|.++ +|+| .|+|.|.|
T Consensus 156 c~~P~i~~~~~~-~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n 234 (347)
T 2ifg_A 156 CGVPTLKVQVPN-ASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAEN 234 (347)
T ss_dssp CCCCEEEEECCS-SCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEE
T ss_pred CCCCceeccCCc-eEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEc
Confidence 458999988888 89999999999999999999999999994332221111 2236778999999 6999 99999999
Q ss_pred cCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCC----CCCeEE-eec---
Q psy8771 178 VLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAA----NTPYSE-ISG--- 249 (904)
Q Consensus 178 ~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~----~~~~~~-~~~--- 249 (904)
..|..+..+.|.|.. +|.. .+ ........+++.+...+.+.. .|.|...+. ...... ...
T Consensus 235 ~~g~~~~~~~l~V~~-------~P~i--~~-~~~~~g~~v~l~C~~~g~P~p--~i~W~~~g~~l~~~~~~~~~~~~~~~ 302 (347)
T 2ifg_A 235 DVGRAEVSVQVNVSF-------PASV--QL-HTAVEMHHWCIPFSVDGQPAP--SLRWLFNGSVLNETSFIFTEFLEPAA 302 (347)
T ss_dssp TTEECCEEECCCCBE-------EEEE--EE-CCCEESSSEEEEEEEEEESCC--EEEEEETTEECCCCSSEEEEECCCCT
T ss_pred CCCCEEEEEEEEEcC-------CCee--ee-ccCccCceEEEEEEeeecCCC--cEEEEeCCEECCCCcceeeEEEeecC
Confidence 999887777777762 1110 00 001112344444443322222 223332211 111110 001
Q ss_pred ---ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 250 ---IITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 250 ---~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
.....+.|.++...+.+.|+|.|.|..|..
T Consensus 303 ~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~ 335 (347)
T 2ifg_A 303 NETVRHGCLRLNQPTHVNNGNYTLLAANPFGQA 335 (347)
T ss_dssp TCCCEEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred CCcccceEEEECCCCcccCceEEEEEecCCCce
Confidence 224669999999999999999999998864
No 392
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=99.08 E-value=4.6e-10 Score=93.00 Aligned_cols=83 Identities=20% Similarity=0.271 Sum_probs=68.7
Q ss_pred CCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCC-CeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771 199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANT-PYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277 (904)
Q Consensus 199 ~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g 277 (904)
+.+.+|.+|++...+.+++.|+|.++.+.+.+|.|.|...++.. ..........+.++|.+|+|++.|.|+|+|.|..|
T Consensus 3 t~~~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~v~V~A~~~~G 82 (97)
T 3qht_C 3 SVSSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYSYY 82 (97)
T ss_dssp --CCSSSSCEEEEEETTEEEEECCCCCSSCCEEEEEEEESSSCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEEET
T ss_pred CCCCCCCceEEEecCCCEEEEEEeCCCCCCCEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCCc
Confidence 57889999999999999999999999889999999999865442 22223344568899999999999999999999999
Q ss_pred CCCC
Q psy8771 278 RGPP 281 (904)
Q Consensus 278 ~s~~ 281 (904)
.+..
T Consensus 83 ~gp~ 86 (97)
T 3qht_C 83 DLYY 86 (97)
T ss_dssp TEEE
T ss_pred cCCC
Confidence 8753
No 393
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.08 E-value=8.2e-10 Score=92.43 Aligned_cols=84 Identities=21% Similarity=0.263 Sum_probs=70.5
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a 175 (904)
..+|.|...+.+.+.+.+|+.+.|.|.+. .|.+.|.|+|+ +..+..+.++.+. ...|.|.++ +|+|.|+|.|
T Consensus 5 ~~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~-g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 82 (100)
T 2yuv_A 5 SSGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKN-GQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA 82 (100)
T ss_dssp SSSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEES-SCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE
T ss_pred CCCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEEC-CEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE
Confidence 45788988888657889999999999999 79999999999 7777666666542 236999999 6999999999
Q ss_pred EecCcceEEEEEEEEE
Q psy8771 176 ASVLGVIETSTIVKVQ 191 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~ 191 (904)
|.....+.|.|.
T Consensus 83 ----g~~~~~~~l~V~ 94 (100)
T 2yuv_A 83 ----GDEKCSTELFVR 94 (100)
T ss_dssp ----TTEEEEEEEEEC
T ss_pred ----CCceEEEEEEEe
Confidence 777888889888
No 394
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.08 E-value=3.1e-10 Score=96.28 Aligned_cols=85 Identities=16% Similarity=0.294 Sum_probs=71.1
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a 175 (904)
..||.|...+.+ +.+.+|+.+.|.|.+.|.|.+ |.|+|+ +..+....++.+. ...|.|.++ +|+|.|+|.|
T Consensus 6 ~~~p~~~~~~~~-~~v~~G~~v~l~C~~~~~~~~-v~W~k~-g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (106)
T 2dlt_A 6 SGQLEVLQDIAD-LTVKAAEQAVFKCEVSDEKVT-GKWYKN-GVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVP 82 (106)
T ss_dssp CCCCCEEECCCC-EEEESSCCEECCCEESCSSCE-EEEEES-SCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEE
T ss_pred CCCCEEecCCCC-eEEeCCCeEEEEEEEcCCCcc-eEEEcC-CEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEE
Confidence 568899999998 999999999999999999988 999999 7777666666542 248999999 6999999999
Q ss_pred EecCcceEEEEEEEEE
Q psy8771 176 ASVLGVIETSTIVKVQ 191 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~ 191 (904)
.|. ..+..+.|.|.
T Consensus 83 ~n~--~~~~~~~l~V~ 96 (106)
T 2dlt_A 83 DGY--ALSLSAKLNFL 96 (106)
T ss_dssp ETS--CCCCCBCEEEE
T ss_pred ccC--CceEEEEEEEE
Confidence 997 44566667776
No 395
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.08 E-value=9.6e-10 Score=94.51 Aligned_cols=82 Identities=22% Similarity=0.374 Sum_probs=69.5
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec-ce---EEEEeee--cCCeEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG-RN---VLTLDRV--TESENYTCIA 175 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~-~~---~l~i~~l--~d~g~Y~c~a 175 (904)
..||.|...+.+ +.+.+|+++.|.|.+.|. |.|.|+|+ +..+..+.++.+. ++ .|.|.++ +|+|.|+|.|
T Consensus 17 ~~pp~~~~~~~~-~~v~~G~~v~l~C~~~~~--p~v~W~k~-~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 92 (113)
T 2edh_A 17 ALPIKFTEGLRN-EEATEGATAVLRCELSKM--APVEWWKG-HETLRDGDRHSLRQDGARCELQIRGLVAEDAGEYLCMC 92 (113)
T ss_dssp CSCCCEEECCCC-CEECTTSCEEEEEEESSC--CCCEEEES-SSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEEEEEE
T ss_pred cCCCcccccCCc-eEEeCCCeEEEEEEECCC--CcEEEEEC-CEECCCCCcEEEEECCCEEEEEECCCChhhCEEEEEEe
Confidence 356799888888 899999999999999886 67999999 7777777777652 33 7999999 6999999999
Q ss_pred EecCcceEEEEEEEEE
Q psy8771 176 ASVLGVIETSTIVKVQ 191 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~ 191 (904)
|.....+.|.|.
T Consensus 93 ----~~~~~~~~l~V~ 104 (113)
T 2edh_A 93 ----GKERTSAMLTVR 104 (113)
T ss_dssp ----TTEEEEEEEEEC
T ss_pred ----CCCCEEEEEEEe
Confidence 778888889988
No 396
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.08 E-value=3.4e-10 Score=93.75 Aligned_cols=77 Identities=23% Similarity=0.411 Sum_probs=68.2
Q ss_pred CCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEE
Q psy8771 111 PPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIV 188 (904)
Q Consensus 111 ~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l 188 (904)
|.+ +.+.+|+.+.|.|.+.| .|.|.|+|+ +..+....++...++.|.|.++ +|+|.|+|.|.|..|.....+.|
T Consensus 8 p~~-~~v~~G~~~~l~C~~~~--~p~v~W~k~-g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l 83 (95)
T 4hwu_A 8 PEA-YVVAPGESLELQCMLKD--AAVISWTKD-GVHLGPNNRTVLIGEYLQIKGATPRDSGLYACTAARTVDSETWIFMV 83 (95)
T ss_dssp CEE-EEECTTSCEEEECCCCT--TCEEEEEET-TEEECCCSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred CCc-EEECCCCEEEEEEEeCC--CCEEEEEEC-CEECCCCceEEEeCCEEEECcCCcccCEEEEEEEccCCCcEEEEEEE
Confidence 445 88999999999999998 479999999 7778777788888889999999 69999999999999988888888
Q ss_pred EEE
Q psy8771 189 KVQ 191 (904)
Q Consensus 189 ~v~ 191 (904)
.|.
T Consensus 84 ~V~ 86 (95)
T 4hwu_A 84 NVT 86 (95)
T ss_dssp EEC
T ss_pred EEe
Confidence 887
No 397
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.08 E-value=5.1e-10 Score=109.22 Aligned_cols=149 Identities=19% Similarity=0.393 Sum_probs=100.7
Q ss_pred CCCCcEEEeccCCceEEEEeCCCC----------------CCCceecccc-----cccccceEEEEeeeccCCee--eee
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPET----------------PNGQITHPPT-----RAARSHARLAAQSVLRRGRL--AHA 92 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~----------------~~g~i~~~~~-----~~~~~~~~~~~~~~~~~g~~--~~~ 92 (904)
....|.|...+.+.+.+.|.+... .+|.+....+ ...+.....|...+.. |.. ..+
T Consensus 25 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~-g~~~~~~~ 103 (212)
T 2v9r_A 25 EPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYL-GEAVSHDA 103 (212)
T ss_dssp CCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETT-EEEECCCE
T ss_pred CcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCC-Cceeecce
Confidence 566666666667788999976521 1233221111 2334444444444332 322 233
Q ss_pred eeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEeeCCccccCC-CCceeecceEEEEeee--cCC
Q psy8771 93 VRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELTP-DDKLPVGRNVLTLDRV--TES 168 (904)
Q Consensus 93 ~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~~-~~~~~~~~~~l~i~~l--~d~ 168 (904)
.+.+. ..+|.+...+.. ..+..|+.+.|.|.+ .|.|.+.|.|+++ +..+.. ..++...++.|.|.++ +|+
T Consensus 104 ~l~V~----~~~~~~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~v~W~~~-~~~l~~~~~~~~~~~~~L~i~~~~~~d~ 177 (212)
T 2v9r_A 104 SLEVA----ILRDDFRQNPSD-VMVAVGEPAVMECQPPRGHPEPTISWKKD-GSPLDDKDERITIRGGKLMITYTRKSDA 177 (212)
T ss_dssp EEEEC----EECSSCSBCCCC-EEEETTSCEEEECBCCCEESCCEEEEEET-TEEECTTSTTEEEETTEEEESSCCGGGC
T ss_pred EEEEE----eccccceeCCCc-eEecCCCcEEEEEecCCCCCCCEEEEEEC-CccCCCCcceEEccCCeEEEeeCCHhhC
Confidence 44443 224455566666 899999999999999 8999999999999 655544 4566677889999999 699
Q ss_pred eEEEEEEEecCcceEE-EEEEEEE
Q psy8771 169 ENYTCIAASVLGVIET-STIVKVQ 191 (904)
Q Consensus 169 g~Y~c~a~n~~g~~~~-~~~l~v~ 191 (904)
|.|+|.|.|..|...+ .+.|.|.
T Consensus 178 G~Y~C~a~N~~g~~~s~~~~l~V~ 201 (212)
T 2v9r_A 178 GKYVCVGTNMVGERESEVAELTVL 201 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEE
T ss_pred eeEEEEEecccCceecceEEEEEE
Confidence 9999999999998665 4788888
No 398
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=99.07 E-value=5.9e-10 Score=92.36 Aligned_cols=82 Identities=18% Similarity=0.261 Sum_probs=68.6
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc-c-ceEEecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA-K-HHRRIGLVETYSLTGLYPNTLYYIWLAAQSP 697 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~-~-~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~ 697 (904)
.+.+|.+|++.+++.+++.|+|.++ .+.+.+|.|.|+..++.. . ........++++|.+|+|++.|.|+|+|++.
T Consensus 4 ~~~~P~~l~v~~~t~~Si~lsW~~p---~~~i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~v~V~A~~~ 80 (97)
T 3qht_C 4 VSSVPTKLEVVAATPTSLLISWDAS---SSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYS 80 (97)
T ss_dssp -CCSSSSCEEEEEETTEEEEECCCC---CSSCCEEEEEEEESSSCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEE
T ss_pred CCCCCCceEEEecCCCEEEEEEeCC---CCCCCEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeC
Confidence 4679999999999999999999985 468999999999876553 2 2334456789999999999999999999999
Q ss_pred CCCCCCC
Q psy8771 698 RGEGATT 704 (904)
Q Consensus 698 ~G~~~~s 704 (904)
.|.|+.+
T Consensus 81 ~G~gp~s 87 (97)
T 3qht_C 81 YYDLYYS 87 (97)
T ss_dssp ETTEEEE
T ss_pred CccCCCC
Confidence 9998643
No 399
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.07 E-value=1.2e-09 Score=91.74 Aligned_cols=83 Identities=17% Similarity=0.240 Sum_probs=65.4
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAF 559 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~ 559 (904)
.++.+|.+|++..++.++|.|+|.+|.. +.+|+|+|+.........+........ ++.|.+|.|++.|.|+|+|+
T Consensus 7 ~~~~~P~~l~~~~~~~~sv~lsW~~p~~----~~~Y~v~y~~~~~~~~~~~~~~~~~~~-~~~l~~L~p~t~Y~~~V~A~ 81 (104)
T 2dkm_A 7 GPLPPPRALTLAAVTPRTVHLTWQPSAG----ATHYLVRCSPASPKGEEEEREVQVGRP-EVLLDGLEPGRDYEVSVQSL 81 (104)
T ss_dssp CSCCCCCCCEEEEECSSEEEEECCCCSS----CSEEEEEEEESSSCCSSCCEEEEESSS-EEEEESCCTTCCEEEEEEEE
T ss_pred CCCCCCceeEEEecCCCEEEEEEeCCCC----CCeEEEEEEECCCCCCcceEEEecCCC-EEEECCCCCCCEEEEEEEEE
Confidence 4567899999999999999999998753 389999999876432223334444444 89999999999999999999
Q ss_pred eCCCCCCC
Q psy8771 560 TSVGPGPL 567 (904)
Q Consensus 560 ~~~g~~~~ 567 (904)
|..|.+..
T Consensus 82 ~~~~~s~p 89 (104)
T 2dkm_A 82 RGPEGSEA 89 (104)
T ss_dssp CSSSBCCC
T ss_pred CCCCCCCC
Confidence 98876543
No 400
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.07 E-value=2.1e-09 Score=110.76 Aligned_cols=240 Identities=11% Similarity=0.134 Sum_probs=121.2
Q ss_pred EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--c---ceEEEEeee--cCCeEEEEEEEecC
Q psy8771 107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--G---RNVLTLDRV--TESENYTCIAASVL 179 (904)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~---~~~l~i~~l--~d~g~Y~c~a~n~~ 179 (904)
|.....+ +.+.+|++++|.|.+.|. |+|+|+ +..+.. ++.. . .+.|.|.++ +|+|.|+|.|.|..
T Consensus 3 i~~~~~~-~~v~~G~~v~L~C~~~~~----v~W~~~-~~~~~~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 74 (289)
T 3mjg_X 3 VTPPGPE-LVLNVSSTFVLTCSGSAP----VVWERM-SQEPPQ--EMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSR 74 (289)
T ss_dssp BCSSCSE-EECCTTCCEEEEEEESSC----CEEEBT-TBCCSE--EEEECTTSCEEEEEEECSCCGGGCEEEEEECCC--
T ss_pred ecCCCCe-EEEeCCCcEEEEEeccce----EEEECC-CCCccc--ceeccCCCceeEEEEEccCChhhCEEEEEEEcccC
Confidence 3333344 889999999999999986 999999 555532 2221 1 368999998 69999999999988
Q ss_pred cc-eEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEc
Q psy8771 180 GV-IETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVR 258 (904)
Q Consensus 180 g~-~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~ 258 (904)
|. ......+.+..........+..+....+.......+.|.+... .+.....+.+... +.......... ..+.
T Consensus 75 g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~--~~~~~~~~~~~-~~~~-- 148 (289)
T 3mjg_X 75 GLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKG--DVALPVPYDHQ-RGFS-- 148 (289)
T ss_dssp ----CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSC--CSCCCCCEETT-TEEE--
T ss_pred CCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCC--CCccceeecCC-cCee--
Confidence 76 2233344444211111111111121112233445677777665 2222333444321 11111111111 1121
Q ss_pred CCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCC---CCC----------ceEecccCCCeeEEEecCCCCCCce-
Q psy8771 259 NLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGT---APR----------DVQVRPLSSSTMVIQWDEPETPNGQ- 324 (904)
Q Consensus 259 ~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~---~p~----------~l~~~~~~~~~v~l~W~~p~~~~~~- 324 (904)
.+.+.+.|+|.|.|..+... +....+......++. .|. .|.+...+.....+.|.......+.
T Consensus 149 --~~~d~G~Y~C~a~n~~~~~~-s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~ 225 (289)
T 3mjg_X 149 --GIFEDRSYICKTTIGDREVD-SDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRL 225 (289)
T ss_dssp --ECCCSSEEEEEEEETTEEEE-CCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCC
T ss_pred --eeccCcEEEEEEEeCCceee-eeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCc
Confidence 24577899999998765432 222233222211111 011 1222222333445566533221111
Q ss_pred eeEEEEEe----eceeEEEEEcCCCCCcEEEEEEEEEcCCCCC
Q psy8771 325 ITAKHHRR----IGLVETYSLTGLYPNTLYYIWLAAQSPRGEG 363 (904)
Q Consensus 325 ~~~~~~~~----~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~~ 363 (904)
+....... ......+.|..+.....-.+.+.|.|..|..
T Consensus 226 ~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~ 268 (289)
T 3mjg_X 226 VEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDH 268 (289)
T ss_dssp CCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTE
T ss_pred ccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCc
Confidence 11000110 1234578899999888888999999988864
No 401
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.07 E-value=2.5e-10 Score=91.12 Aligned_cols=71 Identities=23% Similarity=0.365 Sum_probs=59.0
Q ss_pred eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEEEEEecCcceEEEEEE
Q psy8771 115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTCIAASVLGVIETSTIV 188 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l 188 (904)
+.+.+|+++.|.|.+.| |.|.|+|+|+ |..+..+.++.+ ....|.|.++ +|+|.|+|.|.| ...++.|
T Consensus 6 v~~~~G~~v~l~C~vs~-p~p~v~W~k~-g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a~l 79 (84)
T 2lu7_A 6 VRSTPGGDLELVVHLSG-PGGPVRWYKD-GERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRIFLV 79 (84)
T ss_dssp EEECTTSCEEEECCCSC-CSTTCEEEET-TEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEEEEE
T ss_pred EEEecCCCEEEEEEECC-CCcEEEEEEC-CEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEEEEE
Confidence 89999999999999977 8899999999 888877777664 2347999999 699999999844 4566777
Q ss_pred EEE
Q psy8771 189 KVQ 191 (904)
Q Consensus 189 ~v~ 191 (904)
.|.
T Consensus 80 ~V~ 82 (84)
T 2lu7_A 80 SVE 82 (84)
T ss_dssp EEC
T ss_pred EEE
Confidence 776
No 402
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=99.07 E-value=9.9e-10 Score=93.91 Aligned_cols=84 Identities=26% Similarity=0.415 Sum_probs=62.0
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEee-------------cCceEEEEcCC
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVV-------------DNNQLTTISDL 546 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~L 546 (904)
.||.+|. +..++.+++.|+|.+|.+.++.|.+|.|+|+.... ...|..... ...+.+.+.+|
T Consensus 4 ~pP~~P~---v~~~~~~sv~L~W~~P~~~G~pI~~Y~Ve~r~~~~--~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L 78 (115)
T 2ic2_A 4 YPPTPPN---VTRLSDESVMLRWMVPRNDGLPIVIFKVQYRMVGK--RKNWQTTNDNIPYGKPKWNSELGKSFTASVTDL 78 (115)
T ss_dssp CCCCCCE---EEECC---EEEEEEEECCSSCCEEEEEEEEEECC-----CCEEEEEEEECCSCSCSSSSEEEEEEEECSC
T ss_pred CCCCcCE---eEEEeCCEEEEEEcCCCCCCCCCceEEEEEEECCC--CCCceECcccccccccccccccCceeEEEeCCC
Confidence 4556775 67889999999999998777889999999998732 245654322 22357899999
Q ss_pred CCCCeEEEEEEEEeCCCCCCCC
Q psy8771 547 TPHTIYTIRVQAFTSVGPGPLS 568 (904)
Q Consensus 547 ~p~t~Y~~~V~a~~~~g~~~~S 568 (904)
.|++.|.|+|+|+|..|.+..|
T Consensus 79 ~p~t~Y~FRV~A~N~~G~~~pS 100 (115)
T 2ic2_A 79 KPQHTYRFRILAVYSNNDNKES 100 (115)
T ss_dssp CSSEEEEEEEEEEETTSCEEEC
T ss_pred CCCCEEEEEEEEEeCCCCCCCC
Confidence 9999999999999999975444
No 403
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.07 E-value=5.2e-11 Score=104.15 Aligned_cols=89 Identities=19% Similarity=0.295 Sum_probs=74.1
Q ss_pred CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCe-EEEeeCCccccCC--CCceee-----c---ceEEEEeee--c
Q psy8771 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTP--DDKLPV-----G---RNVLTLDRV--T 166 (904)
Q Consensus 100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~k~~~~~~~~--~~~~~~-----~---~~~l~i~~l--~ 166 (904)
.+..||.|.. +.. +.+.+|+.+.|.|.+.|.|.|. |.|+++ +..+.. ..++.+ . ...|.|.++ +
T Consensus 10 ~V~~~P~i~~-~~~-~~~~~G~~v~l~C~~~g~P~p~~i~W~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 86 (122)
T 2cry_A 10 TVNGPPIISS-TQT-QHALHGEKGQIKCFIRSTPPPDRIAWSWK-ENVLESGTSGRYTVETISTEEGVISTLTISNIVRA 86 (122)
T ss_dssp CCCSSCCEEE-ECC-CCCCTTSCCCCCEEECCSSCCSEEEEESS-SCEECSEEETTEEEEEEEETTEEEEEEECTTCCHH
T ss_pred EEecCCCccC-CCe-EEEecCCCEEEEEEEeecCCCcEeEEEEC-CEEccCCCCCCEEEEEecCCCceEEEEEEcCCChh
Confidence 3578899988 766 8999999999999999999997 999999 666654 345544 2 338999999 5
Q ss_pred CC-eEEEEEEEecCcceEEEEEEEEE
Q psy8771 167 ES-ENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 167 d~-g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
|. |.|+|.|.|..|.....+.|.|.
T Consensus 87 D~~G~Y~C~a~N~~G~~~~~~~l~V~ 112 (122)
T 2cry_A 87 DFQTIYNCTAWNSFGSDTEIIRLKEQ 112 (122)
T ss_dssp HHHSCEEEEEECSSCEEEEEECCCCS
T ss_pred hCCceEEEEEECCCCeEEEEEEEEEC
Confidence 88 99999999999999988888877
No 404
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.07 E-value=1.6e-10 Score=97.04 Aligned_cols=84 Identities=19% Similarity=0.329 Sum_probs=68.1
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC----ceee--c--ceEEEEeee--cCCeE
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD----KLPV--G--RNVLTLDRV--TESEN 170 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~----~~~~--~--~~~l~i~~l--~d~g~ 170 (904)
...||.|...+.+ +.+.+|+.+.|.|.+.|.| +.|.|+|+ +..+.... ++.+ + ...|.|.++ +|+|.
T Consensus 5 ~~~p~~~~~~~~~-~~v~~G~~v~l~C~~~~~~-~~v~W~k~-g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~ 81 (101)
T 2edk_A 5 SSGPVLIVTPLED-QQVFVGDRVEMAVEVSEEG-AQVMWMKN-GVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGR 81 (101)
T ss_dssp CCCCCCEEECCCC-EEEESSCCCBCCEEESCSS-CCCEEEES-SCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSB
T ss_pred ccCCCEEEecCCc-eEEcCCCCEEEEEEEeCCC-CEEEEEEC-CEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEE
Confidence 3567889998888 9999999999999999999 99999999 76666554 3343 2 246999998 79999
Q ss_pred EEEEEEecCcceEEEEEEEEE
Q psy8771 171 YTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 171 Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
|+|.|.| ....+.|.|.
T Consensus 82 Y~C~a~n----~~~~~~l~V~ 98 (101)
T 2edk_A 82 YQVITNG----GQCEAELIVE 98 (101)
T ss_dssp EEEECSS----CEECCBEEEE
T ss_pred EEEEEcC----CcEEEEEEEe
Confidence 9999987 3456677777
No 405
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.07 E-value=7.2e-10 Score=91.69 Aligned_cols=83 Identities=25% Similarity=0.420 Sum_probs=68.3
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a 175 (904)
..+|.|...|.+ +.+.+|+++.|.|.+ +.|.+.|.|+|+ +..+..+.++.+. ...|.|.++ +|+|.|+|.|
T Consensus 6 ~~~~~~~~~~~~-~~v~~G~~v~l~C~~-~~p~~~v~W~k~-~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 82 (95)
T 2k1m_A 6 KPVSAFSKKPRS-VEVAAGSPAVFEAET-ERAGVKVRWQRG-GSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA 82 (95)
T ss_dssp CCCCCCSBCCCC-EEEETTSCEEEEEEC-SSSSCCCEEECS-SSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE
T ss_pred CCCCeeEeCCCc-EEEeCCCcEEEEEEe-CCCCCeEEEEEC-CEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE
Confidence 445778888888 999999999999999 889999999999 7777666565542 247999999 6999999999
Q ss_pred EecCcceEEEEEEEEE
Q psy8771 176 ASVLGVIETSTIVKVQ 191 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~ 191 (904)
|.....+.|.|.
T Consensus 83 ----g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 ----GSSKVKFDLKVI 94 (95)
T ss_dssp ----TTEEEEEEEEEE
T ss_pred ----CCceEEEEEEEe
Confidence 667777888775
No 406
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.06 E-value=5.8e-09 Score=100.55 Aligned_cols=157 Identities=10% Similarity=0.092 Sum_probs=100.2
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCc---ee--ecceEEEEeee--cCCeEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDK---LP--VGRNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~---~~--~~~~~l~i~~l--~d~g~Y~c~ 174 (904)
..+|.|...|. ..+.+|++++|.|.+.+ |.+.+.|+|+ +..+....+ +. ..++.|.|.++ +|+|.|+|.
T Consensus 6 ~~~P~i~~~p~--~~v~~G~~v~L~C~~~~-~~~~~~w~k~-g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~ 81 (201)
T 1nkr_A 6 HRKPSLLAHPG--PLVKSEETVILQCWSDV-MFEHFLLHRE-GMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCY 81 (201)
T ss_dssp -CCCEEEEESC--SEEETTCCEEEEEEESS-CCSEEEEEEE-SSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEE
T ss_pred CCCCeEEEEcC--CccCCCCcEEEEEeccC-CCCEEEEEEC-CCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEe
Confidence 45778887775 67889999999999985 7789999999 544422111 11 24678999998 699999999
Q ss_pred EEecCc-----ceEEEEEEEEEeecCCCCCCCCCCcceEE----EeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeE
Q psy8771 175 AASVLG-----VIETSTIVKVQCKYAPLLTLPVAPLDVKI----SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYS 245 (904)
Q Consensus 175 a~n~~g-----~~~~~~~l~v~~~~~~~~~~P~~p~~l~~----~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~ 245 (904)
|.|..+ ..+..+.|.|. ..+.+|. +.+ .......++|.+...... .. +.|...+......
T Consensus 82 a~~~~~~~~~~~~s~~~~l~V~-------~~~~~p~-i~~~p~~~v~~G~~v~L~C~~~~~~-~~--~~w~k~g~~~~~~ 150 (201)
T 1nkr_A 82 GSVTHSPYQVSAPSDPLDIVII-------GLYEKPS-LSAQPGPTVLAGENVTLSCSSRSSY-DM--YHLSREGEAHERR 150 (201)
T ss_dssp EEBTTBTTCCCCCCCCEEEEEE-------CSSCCCE-EEEESCSEECTTCEEEEEEEESSCC-SE--EEEEETTCSSCEE
T ss_pred EecCCCCccccCCCCCEEEEee-------ccCCCCc-eecCCCCccCCCCeEEEEEeCCCCC-ce--EEEEECCcccCcc
Confidence 987532 23455677777 3322332 111 112346788888765432 33 3344443322211
Q ss_pred E-----eecceeceEEEcCCCCCCeEEEEEEEEcC
Q psy8771 246 E-----ISGIITTYYTVRNLSPYTEYEFYIIAVNN 275 (904)
Q Consensus 246 ~-----~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~ 275 (904)
. ..+.....|.|.+++ +.+.|+|.|.+.
T Consensus 151 ~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~ 183 (201)
T 1nkr_A 151 LPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFH 183 (201)
T ss_dssp EECEEEETTEEEEEEEEEECC--SCEEEEEEEEET
T ss_pred cccccccCCceEEEEEeCCcC--CCeeEEEEEEcC
Confidence 1 111225679999998 899999999875
No 407
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=99.06 E-value=5.4e-10 Score=92.56 Aligned_cols=82 Identities=20% Similarity=0.366 Sum_probs=67.7
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCc-cc-cceEEecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYA-KA-KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP 697 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~-~~-~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~ 697 (904)
+.++|.+|.+.+++.+++.|+|.++. +.+.+|.|.|+..+. .. .........+++.|.+|+|++.|.|+|+|++.
T Consensus 1 ~lp~P~~l~v~~~t~~Sv~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~l~gL~P~t~Y~~~V~A~~~ 77 (98)
T 3tes_A 1 MLPAPKNLVVSEVTEDSLRLSWTAPD---AAFDSFMIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVKG 77 (98)
T ss_dssp CBCCCEEEEEESCCSSCEEEEEECCT---TSCSEEEEEEEETTBCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred CCCCCCceEEEecCCCeEEEEecCCc---CccceEEEEEEECCCCCceEEEEcCCCcCEEEECCCCCCCEEEEEEEEEeC
Confidence 35789999999999999999999864 478999999998763 22 23334456789999999999999999999999
Q ss_pred CCCCCCC
Q psy8771 698 RGEGATT 704 (904)
Q Consensus 698 ~G~~~~s 704 (904)
.|.|.+.
T Consensus 78 ~g~S~p~ 84 (98)
T 3tes_A 78 GHRSNPL 84 (98)
T ss_dssp TEEBCCE
T ss_pred CcccCCE
Confidence 8876553
No 408
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.06 E-value=1.1e-09 Score=91.98 Aligned_cols=89 Identities=19% Similarity=0.366 Sum_probs=68.3
Q ss_pred CCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCc-cEEEEecCcceEEecCCCCCceEEEEEEE
Q psy8771 716 PGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSE-ASIVTLKNQTSFVLDELKKWTEYRIWVLA 794 (904)
Q Consensus 716 p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a 794 (904)
+..+|.+|++..++.++|.|+|++|. + +.+|.|+|+..+...+. .....+... .++|.+|+|++.|.|+|+|
T Consensus 8 ~~~~P~~l~~~~~~~~sv~lsW~~p~-----~-~~~Y~v~y~~~~~~~~~~~~~~~~~~~-~~~l~~L~p~t~Y~~~V~A 80 (104)
T 2dkm_A 8 PLPPPRALTLAAVTPRTVHLTWQPSA-----G-ATHYLVRCSPASPKGEEEEREVQVGRP-EVLLDGLEPGRDYEVSVQS 80 (104)
T ss_dssp SCCCCCCCEEEEECSSEEEEECCCCS-----S-CSEEEEEEEESSSCCSSCCEEEEESSS-EEEEESCCTTCCEEEEEEE
T ss_pred CCCCCceeEEEecCCCEEEEEEeCCC-----C-CCeEEEEEEECCCCCCcceEEEecCCC-EEEECCCCCCCEEEEEEEE
Confidence 44478999999999999999999884 2 38999999987653321 233334333 9999999999999999999
Q ss_pred eeCCCCCCCCCcEEeecC
Q psy8771 795 GTSIGDGPSSYPITIRTH 812 (904)
Q Consensus 795 ~~~~g~g~~s~~~~~~t~ 812 (904)
.+..|.+.... +.++|.
T Consensus 81 ~~~~~~s~p~~-~~~~T~ 97 (104)
T 2dkm_A 81 LRGPEGSEARG-IRARTP 97 (104)
T ss_dssp ECSSSBCCCEE-EECCCC
T ss_pred ECCCCCCCCEE-EEEEcC
Confidence 99888776543 556676
No 409
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.06 E-value=1.5e-09 Score=91.27 Aligned_cols=83 Identities=13% Similarity=0.139 Sum_probs=69.0
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC----------ceeec-c---eEEEEeee--
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD----------KLPVG-R---NVLTLDRV-- 165 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~----------~~~~~-~---~~l~i~~l-- 165 (904)
..+|.|...+.+ +.+.+|+++.|+|.+.+ .|.+.|+|| |..+..+. |+.+. + .+|.|.++
T Consensus 6 ~p~~~~~~~l~d-~~v~eG~~a~f~C~vs~--~p~v~W~kn-G~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~ 81 (112)
T 2e6q_A 6 SGTARLVAGLED-VQVYDGEDAVFSLDLST--IIQGTWFLN-GEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKH 81 (112)
T ss_dssp CSCCCEEECCCC-EEEETTCEEEEEEEESS--CCCCEEEES-SCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCS
T ss_pred cCCcEEecCCCC-eEEcCCCcEEEEEEECC--CCeEEEEEC-CEECccCcccccccccccEEEEEeCCcEEEEEECCCCH
Confidence 345789999999 99999999999999998 778999999 88887776 77763 2 38999999
Q ss_pred cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771 166 TESENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 166 ~d~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
+|+|.|+|..- +...+++.|.|.
T Consensus 82 ~D~G~Y~~~~~---~~~~ssA~L~V~ 104 (112)
T 2e6q_A 82 QDSGALVGFSC---PGVQDSAALTIQ 104 (112)
T ss_dssp TTCSEEEEEEE---TTEEEEEEEEEE
T ss_pred HHCccEEEEEE---CCeeEEEEEEEe
Confidence 79999977443 345678999999
No 410
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.06 E-value=1.7e-10 Score=122.38 Aligned_cols=145 Identities=12% Similarity=0.077 Sum_probs=101.3
Q ss_pred CCCCCcEEEeccCCceEEEEeCCCCC------------CCceecccccccccc-eEEEEeeeccCCeeeeeeeeccCCCC
Q psy8771 35 TAPRDVQVRPLSSSTMVIQWDEPETP------------NGQITHPPTRAARSH-ARLAAQSVLRRGRLAHAVRQVADPVR 101 (904)
Q Consensus 35 ~~p~~l~~~~~~~~s~~v~W~~~~~~------------~g~i~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~v~~~~~ 101 (904)
+....|.|...+.+.+.|.|.++... ++.+........+.+ ...|...+..+.....+.+. +
T Consensus 173 G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~-----V 247 (347)
T 2ifg_A 173 GDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVN-----V 247 (347)
T ss_dssp TCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCC-----C
T ss_pred CCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEE-----E
Confidence 45667778877888899999876432 222333334444555 55555444432222222333 3
Q ss_pred CCCCeE-EcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-----------cceEEEEeee--cC
Q psy8771 102 RVPPQF-SIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-----------GRNVLTLDRV--TE 167 (904)
Q Consensus 102 ~~~P~~-~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-----------~~~~l~i~~l--~d 167 (904)
..+|.+ . ..+.+|+.++|.|.+.|.|.|.|+|+|+ +..+....+... .++.|.|.++ +|
T Consensus 248 ~~~P~i~~------~~~~~g~~v~l~C~~~g~P~p~i~W~~~-g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d 320 (347)
T 2ifg_A 248 SFPASVQL------HTAVEMHHWCIPFSVDGQPAPSLRWLFN-GSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVN 320 (347)
T ss_dssp BEEEEEEE------CCCEESSSEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGG
T ss_pred cCCCeeee------ccCccCceEEEEEEeeecCCCcEEEEeC-CEECCCCcceeeEEEeecCCCcccceEEEECCCCccc
Confidence 567775 2 3345799999999999999999999999 777765544332 2567999998 69
Q ss_pred CeEEEEEEEecCcceEEEEEEEEE
Q psy8771 168 SENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 168 ~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
+|.|+|.|.|..|..+.++.|.|.
T Consensus 321 ~G~Y~C~a~N~~G~~~~~~~l~V~ 344 (347)
T 2ifg_A 321 NGNYTLLAANPFGQASASIMAAFM 344 (347)
T ss_dssp CEEEEEEEEETTEEEEEEEEECSC
T ss_pred CceEEEEEecCCCceeeEEEEEec
Confidence 999999999999999988888876
No 411
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.06 E-value=1.3e-09 Score=104.97 Aligned_cols=150 Identities=16% Similarity=0.236 Sum_probs=101.1
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC-----------CC---ceecccccccccceEEEEeeeccCCeeeeeeeeccCCCC
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP-----------NG---QITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVR 101 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~-----------~g---~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~ 101 (904)
....|.|...+.+...+.|.+.... +| .+........+.....|...+..........+.+.
T Consensus 23 ~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~---- 98 (197)
T 3lcy_A 23 EAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQ---- 98 (197)
T ss_dssp SEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEE----
T ss_pred CcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEE----
Confidence 5566677666677789999775311 11 23333333444444445544333333334444432
Q ss_pred CCCCeEEcC--CCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee---cCCeEEE
Q psy8771 102 RVPPQFSIP--PPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV---TESENYT 172 (904)
Q Consensus 102 ~~~P~~~~~--~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l---~d~g~Y~ 172 (904)
.+|.+... ......+..|+.+.|.|.+.|.|.|.+.|+++ +..+....++.+. ...|.|.++ +|+|.|+
T Consensus 99 -~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~ 176 (197)
T 3lcy_A 99 -ATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHG-QKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYK 176 (197)
T ss_dssp -EEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEE
T ss_pred -cCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeEC-CEECCCCCceEEEEcCCEEEEEEccccchhhCceEE
Confidence 23333321 12227888999999999999999999999999 7777776666542 268999998 4899999
Q ss_pred EEEEecCcceEEEEEEEEE
Q psy8771 173 CIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 173 c~a~n~~g~~~~~~~l~v~ 191 (904)
|.|.|..|..+..+.|.|.
T Consensus 177 C~a~n~~g~~~~~~~l~V~ 195 (197)
T 3lcy_A 177 VQLSNVFGTVDAILDVEIQ 195 (197)
T ss_dssp EEEECSSCEEEEEEEEEEE
T ss_pred EEEEcCcCceEEEEEEEEe
Confidence 9999999999999888887
No 412
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=99.06 E-value=7.1e-10 Score=91.43 Aligned_cols=88 Identities=19% Similarity=0.304 Sum_probs=69.8
Q ss_pred CCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcccc--ceEEecccceEEEeCCCCCcEEEEEEEEEcCC
Q psy8771 621 YAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAK--HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPR 698 (904)
Q Consensus 621 ~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~--~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~ 698 (904)
..+|.+|++..++.+++.|+|.++. +.+.+|.|.|+..+.... .....+..++++|.+|.|++.|.|+|+|++..
T Consensus 2 l~~P~~l~~~~~~~~si~lsW~~p~---~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~ 78 (94)
T 1j8k_A 2 IDRPKGLAFTDVDVDSIKIAWESPQ---GQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDD 78 (94)
T ss_dssp CCCCCCCEEEEEETTEEEEECCCCS---SCCSCEEEEEEETTTEEEEECCCCCSSCCEEEECSCCCCSEEEEEEEECSSS
T ss_pred CCCCCccEEEeecCCEEEEEEcCCC---CCcceEEEEEEeCCCCCceEEecCCCCccEEEeCCCCCCCEEEEEEEEEcCC
Confidence 4689999999999999999999875 679999999998764322 11223456799999999999999999999999
Q ss_pred CCCCCCCCeeEEec
Q psy8771 699 GEGATTPPIPVRTK 712 (904)
Q Consensus 699 G~~~~s~~~~~~t~ 712 (904)
|.|.++ ...+.|.
T Consensus 79 g~s~p~-~~~~~T~ 91 (94)
T 1j8k_A 79 MESQPL-IGTQSTA 91 (94)
T ss_dssp CCCCCE-EEEEECC
T ss_pred CcCCCE-EeEEEec
Confidence 988765 3444443
No 413
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.06 E-value=3.2e-10 Score=95.87 Aligned_cols=90 Identities=20% Similarity=0.296 Sum_probs=70.1
Q ss_pred CCCCeEEcCCCCc--eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee----cceEEEEeee--cCCeEEEE
Q psy8771 102 RVPPQFSIPPPAL--LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV----GRNVLTLDRV--TESENYTC 173 (904)
Q Consensus 102 ~~~P~~~~~~~~~--~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~----~~~~l~i~~l--~d~g~Y~c 173 (904)
..||.+...|... +.+.+|+.++|.|.+.|.|.+ |.|+|+ +..+....++.+ ....|.|.++ +|+|.|+|
T Consensus 5 ~~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~-g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 82 (104)
T 2e6p_A 5 SSGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKD-GQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFEC 82 (104)
T ss_dssp CSSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEET-TEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEE
T ss_pred CCCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeC-CEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEE
Confidence 3466666666653 688999999999999999999 999999 777766555553 2357999999 69999999
Q ss_pred EEEecCcceEEEEEEEEEeecCCCCCCCCCC
Q psy8771 174 IAASVLGVIETSTIVKVQCKYAPLLTLPVAP 204 (904)
Q Consensus 174 ~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p 204 (904)
.|.|..+ .+.|.|. .+|.+|
T Consensus 83 ~a~n~~~----~~~l~V~-------~~P~pp 102 (104)
T 2e6p_A 83 RTEGVSA----FFGVTVQ-------DPSGPS 102 (104)
T ss_dssp ECSSCCC----CEEEEEE-------CCCCSS
T ss_pred EECCceE----EEEEEEc-------CCCCCc
Confidence 9998744 5677887 566555
No 414
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=1.8e-10 Score=100.13 Aligned_cols=96 Identities=26% Similarity=0.323 Sum_probs=78.1
Q ss_pred cceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC----CccceEEEEEEEeCCCCCCeEEe-ecceece
Q psy8771 180 GVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP----SETLLYYVIQYKPKAANTPYSEI-SGIITTY 254 (904)
Q Consensus 180 g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~----~~~~~~y~v~~~~~~~~~~~~~~-~~~~~~~ 254 (904)
|..++.+.|.+. ..|.+|.++++...+.+++.|+|.++ +.++.+|.|+++..+. ..|..+ .....+.
T Consensus 4 G~~~~~~~v~~~-------~~P~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~-~~w~~~~~~~~~~~ 75 (120)
T 2yux_A 4 GSSGASIDIQII-------DRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKS-MEWFTVIEHYHRTS 75 (120)
T ss_dssp CCCCCCCCCCCC-------CCCCCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTT-CCCEEEESSCCSSC
T ss_pred CcccEEEEEEee-------cCCCcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCC-CceEEeeecCCcCE
Confidence 555555556665 89999999999999999999999998 2568999999998654 344443 3455688
Q ss_pred EEEcCCCCCCeEEEEEEEEcCCCCCCCCC
Q psy8771 255 YTVRNLSPYTEYEFYIIAVNNLGRGPPSS 283 (904)
Q Consensus 255 ~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~ 283 (904)
+++.+|.|++.|.|+|+|.|..|.+.++.
T Consensus 76 ~~v~~L~p~t~Y~frV~A~n~~G~s~~S~ 104 (120)
T 2yux_A 76 ATITELVIGNEYYFRVFSENMCGLSEDAT 104 (120)
T ss_dssp CEECCCCSSEEEEEEECCCSSSCSCSSCE
T ss_pred EEECCCCCCCEEEEEEEEeeCCcCCCCcc
Confidence 99999999999999999999999987765
No 415
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=1.8e-09 Score=94.57 Aligned_cols=95 Identities=21% Similarity=0.315 Sum_probs=75.2
Q ss_pred CCCCCCC-CeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCC--------CCCcceEEEeecCceEEEEcCCCCCC
Q psy8771 480 EPGTAPR-DVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQS--------LPMSAWETQVVDNNQLTTISDLTPHT 550 (904)
Q Consensus 480 ~p~~~p~-~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~L~p~t 550 (904)
..|.+|. ++.+...+.+++.|+|++|.+.+ +.+|.|.|+.... .....|........+.+++.+|.|++
T Consensus 14 ~~P~~P~~~~~~~~~~~~sv~L~W~~p~~~g--~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~gL~p~t 91 (127)
T 2dmk_A 14 TAPNPPSIREELCTASHDTITVHWISDDEFS--ISSYELQYTIFTGQANFISLYNSVDSWMIVPNIKQNHYTVHGLQSGT 91 (127)
T ss_dssp SSCCCCEEEEEEEEEETTEEEEEEECSCCSS--EEEEEEEEEEESCCSCHHHHHHTGGGSEEEEEECSSEEEEESCCSSC
T ss_pred CCCcCCCCCCEEEeeeCCEEEEEECCCCCCC--ccceEEEEEEecccccccccccCCCCcEEeecccCCeEEECCCCCCC
Confidence 3457888 89999999999999999987643 7889999886211 01145766554567789999999999
Q ss_pred eEEEEEEEEeCCCCCCCCCcEEEecCC
Q psy8771 551 IYTIRVQAFTSVGPGPLSAPVLVKTQQ 577 (904)
Q Consensus 551 ~Y~~~V~a~~~~g~~~~S~~~~~~t~~ 577 (904)
.|.|+|+|+|..|. ..|..+.+.|..
T Consensus 92 ~Y~frV~A~N~~G~-~~S~~v~~~T~~ 117 (127)
T 2dmk_A 92 RYIFIVKAINQAGS-RNSEPTRLKTNS 117 (127)
T ss_dssp EEEEEEEEEESSCE-EECCCEEEECCS
T ss_pred EEEEEEEEEeCCCC-CCCcCeEeEeCC
Confidence 99999999999998 578888888753
No 416
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.05 E-value=1.7e-09 Score=105.40 Aligned_cols=124 Identities=19% Similarity=0.176 Sum_probs=80.2
Q ss_pred eecccccccccceEEEEeeeccCCeeee-eeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCC--CeEEEe
Q psy8771 64 ITHPPTRAARSHARLAAQSVLRRGRLAH-AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPM--PFVKWR 140 (904)
Q Consensus 64 i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~--p~i~W~ 140 (904)
++.......|.....|...+.+....+. ..+.+.. ..+|.+...+...+.+.+|+.++|.|.+.|.|. +.|.|+
T Consensus 66 l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~---~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~ 142 (213)
T 2x1w_L 66 FTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVG---YRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWE 142 (213)
T ss_dssp EEEEGGGTTTCSEEEEEEC----CEECCCEEEEECB---CCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEE
T ss_pred EEEccCChhcCceEEEEEEECCeeEEEEEEEEEEeC---CcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEE
Confidence 3333344455555556555432222222 3344421 345555555554369999999999999999664 579999
Q ss_pred eCCccccCCCCc-e-----------eecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771 141 KGQNIELTPDDK-L-----------PVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 141 k~~~~~~~~~~~-~-----------~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
++ +..+..... . ......|.|.++ +|+|.|+|.|.|..|..++.+.|.|.
T Consensus 143 ~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 206 (213)
T 2x1w_L 143 YP-SSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVH 206 (213)
T ss_dssp CS-CSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred ec-CCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCCcEEEEEEEEEe
Confidence 98 444322111 0 122447999999 69999999999999999999999998
No 417
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.05 E-value=5.4e-10 Score=109.23 Aligned_cols=122 Identities=13% Similarity=0.073 Sum_probs=82.5
Q ss_pred eecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEeeC
Q psy8771 64 ITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKG 142 (904)
Q Consensus 64 i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~ 142 (904)
+....+...|.....|...+........+.+.| ..+|.+...+.. ..+.+|+.++|.|.+ .|.|.|.|.|+|+
T Consensus 86 L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V-----~~~p~~~~~~~~-~~~~~g~~v~l~C~~~~g~p~~~v~W~~~ 159 (214)
T 3jz7_A 86 INVTNLQLSDIGTYQCKVKKAPGVANKKFLLTV-----LVKPSGTRCFVD-GSEEIGNDFKLKCEPKEGSLPLQFEWQKL 159 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE-----ECCCBSCEEEEE-SCCBTTCCEEEEEECSBCCSSCEEEEEEC
T ss_pred EEEccCChhhCeEEEEEEEeCCCccccEEEEEE-----EcCCCCceeeee-cceecCCcEEEEecCCCCCCCCEEEEEEC
Confidence 333334444555555555443332333444554 334444333333 457899999999999 8999999999996
Q ss_pred C-ccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771 143 Q-NIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 143 ~-~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
+ +..+....+....++.|.|.++ +|+|.|+|.|.|..|..+..+.|.|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 160 SDSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp STTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred CCCCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 3 3333333334446779999999 69999999999999999888888776
No 418
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.05 E-value=3.6e-09 Score=106.55 Aligned_cols=168 Identities=14% Similarity=0.164 Sum_probs=99.2
Q ss_pred CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc-------------CCCCceee------cceEEEEee
Q psy8771 105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL-------------TPDDKLPV------GRNVLTLDR 164 (904)
Q Consensus 105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~-------------~~~~~~~~------~~~~l~i~~ 164 (904)
..+...|.. +.+.+|++++|.|.+.+.|.+.|.|+|.. +..+ ....|+.+ ...+|.|.+
T Consensus 4 ~~v~q~p~~-~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~ 82 (256)
T 3tf7_C 4 QSVTQPDAR-VTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKAS 82 (256)
T ss_dssp CEEECSCSE-EEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESS
T ss_pred cEEEecCce-EEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECC
Confidence 346666666 99999999999999999999999999831 1110 11233332 345799999
Q ss_pred e--cCCeEEEEEEEecCcc----eEEEEEEEEEee----------------cCCCCCCCCCCcceEEEeecCCeEEEEEe
Q psy8771 165 V--TESENYTCIAASVLGV----IETSTIVKVQCK----------------YAPLLTLPVAPLDVKISEVTATSVRLDWT 222 (904)
Q Consensus 165 l--~d~g~Y~c~a~n~~g~----~~~~~~l~v~~~----------------~~~~~~~P~~p~~l~~~~~~~~sv~l~W~ 222 (904)
+ +|+|.|.|.+.|..+. ....+.|.|... ..........|..+.+. ...+++|.+.
T Consensus 83 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~--~G~~v~L~C~ 160 (256)
T 3tf7_C 83 VHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTV--TGENVTLSCR 160 (256)
T ss_dssp CCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEE--TTCCEEECEE
T ss_pred CCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEe--CCCcEEEEEE
Confidence 9 7999999999997652 223456676620 00000111123333222 2344555555
Q ss_pred CCCccceEEEEEEEeCCCCC---------------------CeEEe-ecceeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771 223 YPSETLLYYVIQYKPKAANT---------------------PYSEI-SGIITTYYTVRNLSPYTEYEFYIIAVNNLGR 278 (904)
Q Consensus 223 ~~~~~~~~y~v~~~~~~~~~---------------------~~~~~-~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~ 278 (904)
..+.. . .+.|.....+. .+... .......|.|.++++.+.+.|.|.|.|..|.
T Consensus 161 ~~~~~-~--~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~ 235 (256)
T 3tf7_C 161 QTNSH-N--YMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQ 235 (256)
T ss_dssp ECSCC-S--EEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTE
T ss_pred cCCCc-e--EEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCc
Confidence 43221 1 12222111111 11111 1223457999999999999999999997663
No 419
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.04 E-value=3.2e-10 Score=97.79 Aligned_cols=83 Identities=17% Similarity=0.181 Sum_probs=70.0
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec-----ceEEEEeee--cCCeEEEEEE
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG-----RNVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~-----~~~l~i~~l--~d~g~Y~c~a 175 (904)
.|+.|...+.+ +.+.+|+.++|.|.+.|.|.|.|.|+|+ +..+..+.++.+. ...|.|.++ +|+|.|+|.
T Consensus 12 ~p~~~~~~~~~-~~v~~G~~v~l~C~~~g~p~p~v~W~k~-g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~- 88 (115)
T 2cr6_A 12 RRVHIIEDLED-VDVQEGSSATFRCRISPANYEPVHWFLD-KTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTIYFE- 88 (115)
T ss_dssp SCCEEEECCCE-EEEETTSCEECCCEEESTTCCSCEEEES-SCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEEEEE-
T ss_pred CCCeEeccCcc-EEEeCCCcEEEEEEEcCCCCCccEEEEC-CEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEEEEE-
Confidence 34588888888 9999999999999999999999999999 7777666655432 347999999 699999999
Q ss_pred EecCcceEEEEEEEEE
Q psy8771 176 ASVLGVIETSTIVKVQ 191 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~ 191 (904)
.|.....+.|.|.
T Consensus 89 ---~g~~~~~~~L~V~ 101 (115)
T 2cr6_A 89 ---AGDQRASAALRVT 101 (115)
T ss_dssp ---ETTEECCEEEEEE
T ss_pred ---ECCeeEEEEEEEE
Confidence 3777888899998
No 420
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=99.04 E-value=1.5e-09 Score=92.70 Aligned_cols=85 Identities=22% Similarity=0.302 Sum_probs=59.7
Q ss_pred EEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEc-cCCCCccEEEEe----------c-CcceEEecCCCCCceEEEEE
Q psy8771 725 CEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVET-GRSDSEASIVTL----------K-NQTSFVLDELKKWTEYRIWV 792 (904)
Q Consensus 725 ~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~-~~~~~~~~~~~~----------~-~~~~~~i~~L~p~t~Y~~~V 792 (904)
+..++.+++.|+|.+|. ..+.+|.+|.|+|+.. ....|....... . ..+.+++.+|.|++.|.|||
T Consensus 11 v~~~~~~sv~L~W~~P~--~~G~pI~~Y~Ve~r~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~FRV 88 (115)
T 2ic2_A 11 VTRLSDESVMLRWMVPR--NDGLPIVIFKVQYRMVGKRKNWQTTNDNIPYGKPKWNSELGKSFTASVTDLKPQHTYRFRI 88 (115)
T ss_dssp EEECC---EEEEEEEEC--CSSCCEEEEEEEEEECC---CCEEEEEEEECCSCSCSSSSEEEEEEEECSCCSSEEEEEEE
T ss_pred eEEEeCCEEEEEEcCCC--CCCCCCceEEEEEEECCCCCCceECcccccccccccccccCceeEEEeCCCCCCCEEEEEE
Confidence 77889999999999995 3447899999999987 333342222222 1 34678999999999999999
Q ss_pred EEeeCCCCC---CCCCcEEeec
Q psy8771 793 LAGTSIGDG---PSSYPITIRT 811 (904)
Q Consensus 793 ~a~~~~g~g---~~s~~~~~~t 811 (904)
+|.|..|.| ..|..+.+++
T Consensus 89 ~A~N~~G~~~pS~~S~~~~~~~ 110 (115)
T 2ic2_A 89 LAVYSNNDNKESNTSAKFYLQP 110 (115)
T ss_dssp EEEETTSCEEECCCCCCEEECC
T ss_pred EEEeCCCCCCCCCCCCCEEeCC
Confidence 999999975 4455555544
No 421
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=99.04 E-value=4.8e-10 Score=95.51 Aligned_cols=77 Identities=23% Similarity=0.362 Sum_probs=64.6
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccc--cceEEecccceEEEeCCCCCcEEEEEEEEEcC
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKA--KHHRRIGLVETYSLTGLYPNTLYYIWLAAQSP 697 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~--~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~ 697 (904)
.|.+|.+|.+.+.+.+++.|+|.++ .+.+.+|.|.|+..++.. .........++++|.+|.|++.|.|+|+|++.
T Consensus 3 vP~~P~~L~v~~~t~~Sv~lsW~~p---~g~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~gL~P~T~Y~v~V~A~~~ 79 (114)
T 3qwq_B 3 VSDVPRDLEVVAATPTSLLISWDSG---RGSYQYYRITYGETGGNSPVQEFTVPGPVHTATISGLKPGVDYTITVYAVTD 79 (114)
T ss_dssp --CCCEEEEEEEEETTEEEEEEECC---SCCCSEEEEEEEESSCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEEE
T ss_pred CCCCCCceEEEecCCCEEEEEEcCC---cCcccEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEEC
Confidence 4789999999999999999999985 468999999999876643 22334456789999999999999999999999
Q ss_pred CC
Q psy8771 698 RG 699 (904)
Q Consensus 698 ~G 699 (904)
.|
T Consensus 80 ~G 81 (114)
T 3qwq_B 80 HK 81 (114)
T ss_dssp EE
T ss_pred Cc
Confidence 88
No 422
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.04 E-value=1.1e-09 Score=98.02 Aligned_cols=82 Identities=21% Similarity=0.402 Sum_probs=64.6
Q ss_pred CCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC----------Cceee-------cceEEE
Q psy8771 99 PVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD----------DKLPV-------GRNVLT 161 (904)
Q Consensus 99 ~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~----------~~~~~-------~~~~l~ 161 (904)
+....||.|...|.+ +.+.+|+++.|.|.+.|.|.|.|.|+|+ +..+... .++.. ..+.|.
T Consensus 16 ~~~~~pP~~~~~p~~-~~v~~G~~v~L~C~~~g~P~p~i~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 93 (137)
T 3qr2_A 16 PRGSHMAGFVQAPLS-QQRWVGGSVELHCEAVGSPVPEIQWWFE-GQGPNDICSQLWDGARLDRVHIHATYHQHAASTIS 93 (137)
T ss_dssp -----CCEEEECCCC-EEEETTSCEEEEEEEECSSCCEEEEEEE-ESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEE
T ss_pred CCCCCCCeEEcCCCC-EEEeCCCCEEEEEEEeeecCCeEEEEEC-CCCccccceeecccCcccceEEecccccccceEEE
Confidence 345789999999998 9999999999999999999999999998 5444321 12222 356899
Q ss_pred Eeee--cCCeEEEEEEEecCcce
Q psy8771 162 LDRV--TESENYTCIAASVLGVI 182 (904)
Q Consensus 162 i~~l--~d~g~Y~c~a~n~~g~~ 182 (904)
|.++ +|+|.|+|.|.|..|..
T Consensus 94 I~~v~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 94 IDTLVEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp ECSCCGGGCEEEEEEEECCTTSS
T ss_pred ECCCCcccCEEEEEEEEecCCcc
Confidence 9999 69999999999999975
No 423
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=1.5e-09 Score=95.05 Aligned_cols=93 Identities=18% Similarity=0.221 Sum_probs=74.4
Q ss_pred ccCCCCCc-ceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCC-----------ccccceEEecccceEEEeCCCCC
Q psy8771 618 NDTYAKPR-DLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTY-----------AKAKHHRRIGLVETYSLTGLYPN 685 (904)
Q Consensus 618 ~~~~~~p~-~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~-----------~~~~~~~~~~~~~~~~l~~L~p~ 685 (904)
.+.|.+|. ++.+..++.++++|+|.++..++ +.+|.+.|.... ...+........+.+++.+|+|+
T Consensus 13 ~~~P~~P~~~~~~~~~~~~sv~L~W~~p~~~g--~~~Y~~~Y~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~gL~p~ 90 (127)
T 2dmk_A 13 LTAPNPPSIREELCTASHDTITVHWISDDEFS--ISSYELQYTIFTGQANFISLYNSVDSWMIVPNIKQNHYTVHGLQSG 90 (127)
T ss_dssp CSSCCCCEEEEEEEEEETTEEEEEEECSCCSS--EEEEEEEEEEESCCSCHHHHHHTGGGSEEEEEECSSEEEEESCCSS
T ss_pred cCCCcCCCCCCEEEeeeCCEEEEEECCCCCCC--ccceEEEEEEecccccccccccCCCCcEEeecccCCeEEECCCCCC
Confidence 34678899 99999999999999999987543 889999998621 12233333345679999999999
Q ss_pred cEEEEEEEEEcCCCCCCCCCCeeEEecC
Q psy8771 686 TLYYIWLAAQSPRGEGATTPPIPVRTKQ 713 (904)
Q Consensus 686 t~Y~v~V~a~~~~G~~~~s~~~~~~t~~ 713 (904)
+.|.|+|+|+|..|. .+|..+.++|..
T Consensus 91 t~Y~frV~A~N~~G~-~~S~~v~~~T~~ 117 (127)
T 2dmk_A 91 TRYIFIVKAINQAGS-RNSEPTRLKTNS 117 (127)
T ss_dssp CEEEEEEEEEESSCE-EECCCEEEECCS
T ss_pred CEEEEEEEEEeCCCC-CCCcCeEeEeCC
Confidence 999999999999999 577888888864
No 424
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.03 E-value=1.1e-08 Score=112.42 Aligned_cols=199 Identities=17% Similarity=0.151 Sum_probs=106.2
Q ss_pred ccccccceEEEEeeeccCCe-eeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEcc-CCCC-eEEEeeCCcc
Q psy8771 69 TRAARSHARLAAQSVLRRGR-LAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPMP-FVKWRKGQNI 145 (904)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~g~-~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p-~i~W~k~~~~ 145 (904)
+...|...+.|...+..... .....+.+.. ...+|.+...+.. ..+.+|+.+.|.|.+.| .|.+ .|+|+|+ +.
T Consensus 82 v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~--~~~~P~v~~~~~~-~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~-g~ 157 (438)
T 1qgc_4 82 VEADDVATYYCQQSNEVPLTFGAGTKLDLKR--ADAAPTVSIFPPS-SEQLTSGGASVVCFLNNFYPKDINVKWKID-GS 157 (438)
T ss_dssp CCGGGCEEEEEEECSSTTCCBCCCEEEEECC--CCBCCEEEEECCC-HHHHHTTEEEEEEEEEEEBSSCEEEEEEET-TE
T ss_pred CcCcCCeeEEEEEecCCCccccCceeEEecC--CCCCCEEEecCCC-hhhccCCceEEEEEEccccCCCcEEEEEEC-CE
Confidence 34445445555554433211 1123334321 2357777664443 34457889999999998 7777 8999999 66
Q ss_pred ccCCCCce--e---------ecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEee
Q psy8771 146 ELTPDDKL--P---------VGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEV 212 (904)
Q Consensus 146 ~~~~~~~~--~---------~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~ 212 (904)
.+...... . .....|.|.++ +|+|.|+|.|.|..|.......+... ..+. .. ..|....+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~--~~~~-~~-~~~~~~~v~-- 231 (438)
T 1qgc_4 158 ERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN--ECEV-ML-VESGGGLVK-- 231 (438)
T ss_dssp EECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETT--C-CC-EE-EEECCEEEC--
T ss_pred EcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccc--ccee-EE-ecCCceEEe--
Confidence 66544111 0 11347899888 69999999999988875332222211 0000 00 012222222
Q ss_pred cCCeEEEEEeCCCccceEEEEEEEeC--CC---------------------CCCeEEee--cceeceEEEcCCCCCCeEE
Q psy8771 213 TATSVRLDWTYPSETLLYYVIQYKPK--AA---------------------NTPYSEIS--GIITTYYTVRNLSPYTEYE 267 (904)
Q Consensus 213 ~~~sv~l~W~~~~~~~~~y~v~~~~~--~~---------------------~~~~~~~~--~~~~~~~~i~~L~p~~~Y~ 267 (904)
....++|.+...+.+.....|.|... +. ...+.... ......|.|.++++.+.+.
T Consensus 232 ~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~ 311 (438)
T 1qgc_4 232 PGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAM 311 (438)
T ss_dssp TTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCE
T ss_pred cCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEE
Confidence 22334444443222111111222211 00 11222111 1224589999999999999
Q ss_pred EEEEEEcCCC
Q psy8771 268 FYIIAVNNLG 277 (904)
Q Consensus 268 ~~v~a~n~~g 277 (904)
|+|.|.|..+
T Consensus 312 Y~C~a~n~~~ 321 (438)
T 1qgc_4 312 YYCVRREDGG 321 (438)
T ss_dssp EEEEECCSSS
T ss_pred EEEEEEccCC
Confidence 9999999554
No 425
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.03 E-value=9.3e-10 Score=102.98 Aligned_cols=152 Identities=11% Similarity=0.191 Sum_probs=99.9
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCc
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLG 180 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g 180 (904)
.|.|...|.. ..+.+|+.+.|.|.+.|.| .+.+.|+|+ +..+... ...+.|.++ +|+|.|+|.+.|..+
T Consensus 4 ~p~i~~~p~~-~~v~~G~~v~l~C~~~~~p~~~~~~W~~~-g~~~~~~------~~~~~~~~~~~~d~G~Y~C~~~~~~~ 75 (170)
T 3ry4_A 4 KAVLKLEPPW-INVLQEDSVTLTCQGARSPESDSIQWFHN-GNLIPTH------TQPSYRFKANNNDSGEYTCQTGQTSL 75 (170)
T ss_dssp BCEEEEESCC-SEEETTCEEEEEEESCCCSSSSCEEEEET-TEECTTC------CSSEEEEECCGGGCEEEEEEETTSBC
T ss_pred CCEEEeCCCC-eEEECCCcEEEEEEecCCCCcceEEEEEC-CeEcccC------ccceEEEecccccCeEEEEEEeCCCc
Confidence 4567777776 8899999999999999997 579999999 6665442 345667777 799999999997544
Q ss_pred ceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC-CccceEEEEEEEeCCCCCCeEEeecceeceEEEcC
Q psy8771 181 VIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTPYSEISGIITTYYTVRN 259 (904)
Q Consensus 181 ~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~-~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~ 259 (904)
+....|.|.. .+... .+| ...+ .....+.|.+... +.+. ..+.|...+ .... .......+.|.+
T Consensus 76 --s~~~~l~v~~--~~~~~--~~~-~~~~--~~g~~~~l~C~~~~~~p~--~~~~W~~~g--~~~~--~~~~~~~L~i~~ 140 (170)
T 3ry4_A 76 --SDPVHLTVLF--EWLVL--QTP-HLEF--QEGETIMLRCHSWKDKPL--VKVTFFQNG--KSQK--FSHLDPTFSIPQ 140 (170)
T ss_dssp --CCCEEEEEEC--CSEEE--ECS-CSEE--CTTCCEEEEEEEGGGCCE--EEEEEEETT--EEEE--EESSCCEEEESS
T ss_pred --eEeEEEEEEC--CceEe--cCC-Ccee--ecCCeEEEEEECCCCCCC--ceEEEEECC--eEcc--ccCCCCeEEEEe
Confidence 3456666661 11000 111 2222 2234566666653 2222 334454432 1111 122346799999
Q ss_pred CCCCCeEEEEEEEEcCCCC
Q psy8771 260 LSPYTEYEFYIIAVNNLGR 278 (904)
Q Consensus 260 L~p~~~Y~~~v~a~n~~g~ 278 (904)
+...+.+.|+|.|.|..|.
T Consensus 141 v~~~d~G~Y~C~a~n~~g~ 159 (170)
T 3ry4_A 141 ANHSHSGDYHCTGNIGYTL 159 (170)
T ss_dssp CCGGGCEEEEEEEEETTEE
T ss_pred ccccCCEEEEEEEEeCcCc
Confidence 9999999999999998874
No 426
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.03 E-value=1.3e-08 Score=100.36 Aligned_cols=158 Identities=13% Similarity=0.130 Sum_probs=86.8
Q ss_pred CCceEEecCCCeEEEEEEccCCCC---eEEEeeCCcccc----------------CCCCceee-------cceEEEEeee
Q psy8771 112 PALLEVMLDSPLNLSCVAVGSPMP---FVKWRKGQNIEL----------------TPDDKLPV-------GRNVLTLDRV 165 (904)
Q Consensus 112 ~~~~~~~~g~~~~l~C~~~g~p~p---~i~W~k~~~~~~----------------~~~~~~~~-------~~~~l~i~~l 165 (904)
.+.+.+.+|++++|.|.+.+.+.+ .|.|+|++.... ....|+.. ++.+|.|.++
T Consensus 11 ~~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 90 (226)
T 4f80_A 11 SGPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNV 90 (226)
T ss_dssp SSCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSC
T ss_pred CCCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeC
Confidence 333899999999999999987765 699999732110 01122221 3458999999
Q ss_pred --cCCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCc-cceEEEEEEEeCCCCC
Q psy8771 166 --TESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSE-TLLYYVIQYKPKAANT 242 (904)
Q Consensus 166 --~d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~-~~~~y~v~~~~~~~~~ 242 (904)
+|+|.|+|.|.|..|..+....+.+. ..+..+ ...........+.+.+...+. +.. .|.|...++..
T Consensus 91 ~~~D~G~Y~C~a~n~~~~~~~~v~~~~~-------~~~~~~-~~~~~~~~g~~v~l~c~~~g~~P~p--~i~W~k~~~~~ 160 (226)
T 4f80_A 91 TASDSGKYLCYFQDGDFYEKALVELKVA-------ALGSDL-HVDVKGYKDGGIHLECRSTGWYPQP--QIQWSNNKGEN 160 (226)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEEEEE-------BCCCCC-EEEEEEEETTEEEEEEEEEEEBSCC--EEEEECTTSCB
T ss_pred chHHCeeEEEEEECCCcEEEEEEEEeec-------cceecc-cceeeeccCCceeeEEEeccCCCCC--EEEEEECCceE
Confidence 69999999999988877666555554 222111 111222233444444443211 111 34444322110
Q ss_pred -CeEE---eec--ceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 243 -PYSE---ISG--IITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 243 -~~~~---~~~--~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
.... ... .......+..+++.+.+.|+|.|.|..|..
T Consensus 161 ~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g~~ 203 (226)
T 4f80_A 161 IPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLLGL 203 (226)
T ss_dssp CCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTTTE
T ss_pred cCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCCCe
Confidence 0000 111 111122334567888999999999998854
No 427
>2erj_C Cytokine receptor common gamma chain; immune system-cytok complex; HET: NAG FUC BMA; 3.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1
Probab=99.02 E-value=1.1e-08 Score=100.84 Aligned_cols=186 Identities=11% Similarity=0.121 Sum_probs=116.2
Q ss_pred CCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEe
Q psy8771 581 SQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWND 660 (904)
Q Consensus 581 ~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~ 660 (904)
.+|.++.+...+...+..+|.+... .....|.+.|+-
T Consensus 38 ~~~~nl~C~~~~~~~l~CtW~~g~~-------------------------------------------~~~t~y~l~y~~ 74 (247)
T 2erj_C 38 LPLPEVQCFVFNVEYMNCTWQSSSE-------------------------------------------PQPTNLTLHYWY 74 (247)
T ss_dssp CCCCCCEEEEETTSEEEEECCTTSS-------------------------------------------SSCCCCEEEEEE
T ss_pred CCCCCCEEEECCCCEEEEEEcCCCC-------------------------------------------CCCeeEEEEEEE
Confidence 3677888888788888999987631 113456666654
Q ss_pred CCcc--cc--c--eEE-ecccceEEEe--CCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCC
Q psy8771 661 TYAK--AK--H--HRR-IGLVETYSLT--GLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSST 731 (904)
Q Consensus 661 ~~~~--~~--~--~~~-~~~~~~~~l~--~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~ 731 (904)
.+.. .+ . ... .+....+.+. .+.....|.|.|++ ..|.. .+....+.....+.+.||.+|++......
T Consensus 75 ~~~~~~~~~~C~~y~~~~g~~~~C~f~~~~~~~~~~y~i~V~~--~~g~~-~s~~~~~~~~~iVkP~PP~nl~v~~~~~~ 151 (247)
T 2erj_C 75 KNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQD--PREPR-RQATQMLKLQNLVIPWAPENLTLHKLSES 151 (247)
T ss_dssp SSSSCCCCEECCSEEESSSSEEEEEEEGGGCCTTSCEEEEEEC--SSCTT-CEEEEEECGGGSEECCCCEEEEEEESSSS
T ss_pred CCCCCCcceeCCCccccCCcceEEEeCCCCcceeeEEEEEEEE--CCCcc-ccceEEEchhHeEEeCCCCeEEEEECCCC
Confidence 3221 11 0 011 1222345554 34456789888864 33321 12233344344443447899999988778
Q ss_pred EEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcceEEecCCCCCceEEEEEEEeeCCC------CCCCCC
Q psy8771 732 SIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQTSFVLDELKKWTEYRIWVLAGTSIG------DGPSSY 805 (904)
Q Consensus 732 ~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g------~g~~s~ 805 (904)
.+.|+|+.|.. .....|+|+|+...+..+ ........+.+.|.+|.|++.|.|+|||....| .|++|+
T Consensus 152 ~l~l~W~~P~~----~~~L~Yevry~~~~~~~W--~~~~~~~~~~~~l~~L~p~~~Y~vqVR~k~~~~~~~~g~WSeWS~ 225 (247)
T 2erj_C 152 QLELNWNNRFL----NHCLEHLVQYRTDWDHSW--TEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSH 225 (247)
T ss_dssp CEEEEEECSSC----CTTEEEEEEEECSSCSSC--EEEEECSSCEEEESCCCTTSCEEEEEEEEECSSSCCCCCCCCCCC
T ss_pred cEEEEECCCCC----CCcEEEEEEEeeCCCCCC--EEEecCCceEEEecCCCCCCEEEEEEEEEeCCCCCCCCccCCCCc
Confidence 99999999842 234589999998655444 333333678999999999999999999998542 467888
Q ss_pred cEEeecCCCCCCC
Q psy8771 806 PITIRTHEDDPSE 818 (904)
Q Consensus 806 ~~~~~t~~~~P~~ 818 (904)
++.+.+.+..+.+
T Consensus 226 ~~~~~t~~~~~~~ 238 (247)
T 2erj_C 226 PIHWGSNTSKENP 238 (247)
T ss_dssp CEEECC-------
T ss_pred CEEEECCCCCCCC
Confidence 8998887665543
No 428
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=9e-10 Score=95.68 Aligned_cols=87 Identities=21% Similarity=0.355 Sum_probs=72.9
Q ss_pred CCCCCCCCeEEEecCCceEEEEecCCCCCC-CceeeEEEEEEeCCCCCCcceEEEe-ecCceEEEEcCCCCCCeEEEEEE
Q psy8771 480 EPGTAPRDVQVRPLSSSTMVIQWDEPETPN-GQITGYKVYYTQDQSLPMSAWETQV-VDNNQLTTISDLTPHTIYTIRVQ 557 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~~~~~~l~W~~p~~~~-~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~ 557 (904)
.+|.+|.++.+...+.+++.|+|++|...+ +.+.+|.|+|+.... ..|.... ....+.+.+.+|.|++.|.|+|+
T Consensus 16 ~~P~~P~~l~~~~~~~~sv~l~W~~p~~~gg~~i~~Y~v~~~~~~~---~~w~~~~~~~~~~~~~v~~L~p~t~Y~frV~ 92 (120)
T 2yux_A 16 DRPGPPQIVKIEDVWGENVALTWTPPKDDGNAAITGYTIQKADKKS---MEWFTVIEHYHRTSATITELVIGNEYYFRVF 92 (120)
T ss_dssp CCCCCCSCEEEEEEETTEEEEEECCCSCCCSSCCCCCCEEEEETTT---CCCEEEESSCCSSCCEECCCCSSEEEEEEEC
T ss_pred cCCCcCCCCEEEEecCCEEEEEEcCCCcCCCCCceEEEEEEEECCC---CceEEeeecCCcCEEEECCCCCCCEEEEEEE
Confidence 355889999999999999999999987665 479999999998753 4565543 24567789999999999999999
Q ss_pred EEeCCCCCCCCC
Q psy8771 558 AFTSVGPGPLSA 569 (904)
Q Consensus 558 a~~~~g~~~~S~ 569 (904)
|.|..|.|.+|.
T Consensus 93 A~n~~G~s~~S~ 104 (120)
T 2yux_A 93 SENMCGLSEDAT 104 (120)
T ss_dssp CCSSSCSCSSCE
T ss_pred EeeCCcCCCCcc
Confidence 999999988775
No 429
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.02 E-value=3.3e-10 Score=107.64 Aligned_cols=149 Identities=13% Similarity=0.113 Sum_probs=95.1
Q ss_pred eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEee-e--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771 115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDR-V--TESENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~-l--~d~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
.....|+++.|.|.+.| |.+ |+|+|+ +..+... .+++|.|.+ + +|+|.|+|.|.|..|.......+.|.
T Consensus 9 ~v~~~G~~v~L~C~~~~-~~~-i~W~k~-g~~l~~~-----~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~ 80 (186)
T 1jbj_A 9 KVSISGTSVELTCPLDS-DEN-LKWEKN-GQELPQK-----HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVG 80 (186)
T ss_dssp EEEEETTEEEEECSSCC-CTT-CEEEET-TEEECSC-----CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCC
T ss_pred EEEeCCcEEEEEEeCCC-CCc-eEEEEC-CEECCCC-----CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEe
Confidence 45578999999999998 544 999999 6666542 456899999 7 79999999999999985555555444
Q ss_pred eecCCCC----------------CCCCCCc--ceEEE-eecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeeccee
Q psy8771 192 CKYAPLL----------------TLPVAPL--DVKIS-EVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIIT 252 (904)
Q Consensus 192 ~~~~~~~----------------~~P~~p~--~l~~~-~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~ 252 (904)
....+.. .....+. .+.+. ......+.|.+..|.. .|.|...+.. .. ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~p~p-----~i~W~k~g~~--i~-~~~~~~ 152 (186)
T 1jbj_A 81 SADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGLTDK-----TIKWLKDGSI--IS-PLNATK 152 (186)
T ss_dssp SCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSSSCS-----CEEEEETTEE--CC-CSSCCS
T ss_pred cccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeCCCC-----eEEEEECCEE--Cc-ccCCCc
Confidence 2111100 0000000 01111 1145677888876422 2444443211 10 011234
Q ss_pred ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 253 TYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
..+.|.++.+.+.+.|+|.|.|..|..
T Consensus 153 ~~L~i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 153 NTWNLGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp SCCEEEETTSCCEEEEEEEESSCEEEE
T ss_pred ceEEECCCCcCcCEEEEEEEEcCcCCc
Confidence 678999999999999999999988753
No 430
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.02 E-value=2.1e-09 Score=111.00 Aligned_cols=239 Identities=13% Similarity=0.073 Sum_probs=133.1
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--cceEEEEeee--cCCeEEEEEEEe
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--GRNVLTLDRV--TESENYTCIAAS 177 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n 177 (904)
..||.|...+.+ +.+.+|++++|.|.+.|. |.|+++ +.. ..++.. ..+.|.|.++ +|+|.|+|.|.|
T Consensus 2 ~~~P~i~~~~~~-~~v~~G~~v~L~C~~~~~----v~W~~~-~~~---~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 72 (292)
T 4dkd_C 2 GSIPVIEPSVPE-LVVKPGATVTLRCVGNGS----VEWDGP-PSP---HWTLYSDGSSSILSTNNATFQNTGTYRCTEPG 72 (292)
T ss_dssp --CCEEESCCSS-CEECTTCCEEEEEECSSC----CCBCCC-CCS---SCEECCBTTEEEEEESSCCGGGCSCEEECCCC
T ss_pred CCCceecCCCCe-EEEcCCCcEEEEEcCCCc----eEEccC-CCC---ceEEeccCceEEEEEcccccccCEEEEEEEcc
Confidence 358899988888 899999999999999995 999987 321 112222 3468999999 699999999999
Q ss_pred cCcceEEEEEEEEEeecCCCCCCCC----CCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeC-CCCC-CeEEeecce
Q psy8771 178 VLGVIETSTIVKVQCKYAPLLTLPV----APLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPK-AANT-PYSEISGII 251 (904)
Q Consensus 178 ~~g~~~~~~~l~v~~~~~~~~~~P~----~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~-~~~~-~~~~~~~~~ 251 (904)
..|..+..+.|.|. .+|. .+..+.+. ....+.|.+...+... .-.+.|... +... .........
T Consensus 73 ~~~~~~~~~~l~V~-------~~~~~~~~~~~~~~v~--~g~~v~l~C~~~~~~~-~~~v~W~~~~~~~~~~~~~~~~~~ 142 (292)
T 4dkd_C 73 DPLGGSAAIHLYVK-------DPARPWNVLAQEVVVF--EDQDALLPCLLTDPVL-EAGVSLVRVRGRPLMRHTNYSFSP 142 (292)
T ss_dssp ----CCEEECCEEC-------CSSCCEEESCSEEEEE--TTSCEECCEEESSGGG-GSSEEEEEGGGCCCCSSCCEECCS
T ss_pred CCCCcceEEEEEEc-------CccccccccCCeEEEc--CCCcEEEeeeCCCCCc-ceeEEEEecCCCccccCCcccccC
Confidence 98888888888887 3222 23334333 3455666665543111 012333222 1110 000011112
Q ss_pred eceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCCCCCCCCCCceEec-----ccCCCeeEEEecCCCCCC-cee
Q psy8771 252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGETEPGTAPRDVQVR-----PLSSSTMVIQWDEPETPN-GQI 325 (904)
Q Consensus 252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~~~p~~~p~~l~~~-----~~~~~~v~l~W~~p~~~~-~~~ 325 (904)
...+.|.++...+.+.|+|.|.|..|... +..+.+...... +.+| .+... ......+.|.+.....+. ..+
T Consensus 143 ~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~-s~~~~l~V~~~~-~~~p-~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~ 219 (292)
T 4dkd_C 143 WHGFTIHRAKFIQSQDYQCSALMGGRKVM-SISIRLKVQKVI-PGPP-ALTLVPAELVRIRGEAAQIVCSASSVDVNFDV 219 (292)
T ss_dssp SSCCEETTCCGGGCSEEEEEECSTTSCEE-CCCEEEEEECCC-CSSC-EEEEESSCBCCCSSSCEEEEEEEEESSSCCEE
T ss_pred CceEEECCCCHHHCeEEEEEEEeCCCcee-EEEEEEEEeCCC-CCCC-eEEccCCceeEecCCCEEEEEEecCCCCceEE
Confidence 24499999999999999999998866432 223333222110 0111 11111 012334444443211110 011
Q ss_pred eEE--------------EEEeeceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771 326 TAK--------------HHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRGE 362 (904)
Q Consensus 326 ~~~--------------~~~~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~ 362 (904)
.++ ..........+.|..+.....-.+++.+.|..|.
T Consensus 220 ~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~ 270 (292)
T 4dkd_C 220 FLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGK 270 (292)
T ss_dssp ECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCE
T ss_pred EEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCC
Confidence 110 0001112346888999988888899999988775
No 431
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.02 E-value=4.8e-09 Score=105.31 Aligned_cols=166 Identities=10% Similarity=0.121 Sum_probs=98.3
Q ss_pred eEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCcc-------------ccCCCCceee----cceEEEEeee--c
Q psy8771 106 QFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNI-------------ELTPDDKLPV----GRNVLTLDRV--T 166 (904)
Q Consensus 106 ~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~-------------~~~~~~~~~~----~~~~l~i~~l--~ 166 (904)
.+...|.. +.+.+|++++|.|.+.|.|.+.|.|+|.... ......|+.. ...+|.|.++ +
T Consensus 6 ~v~~~p~~-~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 84 (250)
T 3esu_F 6 VLIQSTSS-LSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQE 84 (250)
T ss_dssp CEECSCSE-EEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eEEecCCE-EEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChh
Confidence 35566666 8899999999999999999999999985211 0111234433 2347999999 6
Q ss_pred CCeEEEEEEEecCcce-EEEEEEEEEeecC---------------CCCCCCCCCcceEEEeecCCeEEEEEeCCCccceE
Q psy8771 167 ESENYTCIAASVLGVI-ETSTIVKVQCKYA---------------PLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLY 230 (904)
Q Consensus 167 d~g~Y~c~a~n~~g~~-~~~~~l~v~~~~~---------------~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~ 230 (904)
|+|.|.|.|.|..+.. .....|.|..... ........|..+.+ ....+++|.+...+.+...
T Consensus 85 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~G~~v~L~C~~~~~~~~~ 162 (250)
T 3esu_F 85 DIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELV--KPGASVKISCKDSGYAFSS 162 (250)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEE--CTTCCEEEEEECCSTTGGG
T ss_pred hCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEE--cCCceEEEEEEecCCcccC
Confidence 9999999999876642 2344566652100 00000011222322 3345677777754322112
Q ss_pred EEEEEEeCCCCC-----------------------CeEEe--ecceeceEEEcCCCCCCeEEEEEEEEc
Q psy8771 231 YVIQYKPKAANT-----------------------PYSEI--SGIITTYYTVRNLSPYTEYEFYIIAVN 274 (904)
Q Consensus 231 y~v~~~~~~~~~-----------------------~~~~~--~~~~~~~~~i~~L~p~~~Y~~~v~a~n 274 (904)
..+.|.....+. .+... .......|.|.++++.+.+.|.|.|.+
T Consensus 163 ~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 163 SWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp SEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred CEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 233333221111 11111 112334799999999999999999997
No 432
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.02 E-value=1.2e-09 Score=106.79 Aligned_cols=163 Identities=16% Similarity=0.210 Sum_probs=98.6
Q ss_pred CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------------CCCCceee----cceEEEEeee--
Q psy8771 105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDRV-- 165 (904)
Q Consensus 105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~l-- 165 (904)
|.+..+| . +.+.+|++++|.|.+.|.|.+.|.|+|.. +... ....|+.. .+.+|.|.++
T Consensus 2 ~~v~~~~-~-~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 79 (213)
T 3mj8_L 2 YTLTQPP-L-VSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQA 79 (213)
T ss_dssp CCBBCCS-E-EEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred eeEEeCC-c-EEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCCh
Confidence 3455556 5 99999999999999999999999999821 1111 02234442 4568999999
Q ss_pred cCCeEEEEEEEecCc---ceEEEEEEEEEeecCCCCCCC-CCCcceEEEe-----ecCCeEEEEEeCCCccceEEEEEEE
Q psy8771 166 TESENYTCIAASVLG---VIETSTIVKVQCKYAPLLTLP-VAPLDVKISE-----VTATSVRLDWTYPSETLLYYVIQYK 236 (904)
Q Consensus 166 ~d~g~Y~c~a~n~~g---~~~~~~~l~v~~~~~~~~~~P-~~p~~l~~~~-----~~~~sv~l~W~~~~~~~~~y~v~~~ 236 (904)
+|+|.|.|.|.|..| .....+.|.|. ..+ .+| .+.+.. .....++|.+...+.......|.|.
T Consensus 80 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~-------~~~~~~P-~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~ 151 (213)
T 3mj8_L 80 GDEADYYCQSWDGTNSAWVFGSGTKVTVL-------GQPNAAP-SVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWE 151 (213)
T ss_dssp GGCEEEEEEEEETTTTEEEEBCCEEEEEE-------CSCCBCC-EEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEE
T ss_pred hhCEEEEEEeccCCcceeEEcCceEEEEe-------CCCCCCC-eEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEE
Confidence 799999999999988 44566777777 332 222 222211 1234555555543211111124444
Q ss_pred eCCCCC--CeEE----eec---ceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771 237 PKAANT--PYSE----ISG---IITTYYTVRNLSPYTEYEFYIIAVNNLG 277 (904)
Q Consensus 237 ~~~~~~--~~~~----~~~---~~~~~~~i~~L~p~~~Y~~~v~a~n~~g 277 (904)
..+... .... ... .....+.|......+.+.|+|.|.|..+
T Consensus 152 k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 201 (213)
T 3mj8_L 152 ADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGN 201 (213)
T ss_dssp ETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTE
T ss_pred cCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCc
Confidence 322110 0000 000 1124578888888889999999999764
No 433
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.01 E-value=1.5e-09 Score=114.45 Aligned_cols=146 Identities=17% Similarity=0.233 Sum_probs=100.3
Q ss_pred CCcEEE-eccCCceEEEEeCCCC----------CCCceec--c----cccccccceEEEEeeeccCCeeeeeeeeccCCC
Q psy8771 38 RDVQVR-PLSSSTMVIQWDEPET----------PNGQITH--P----PTRAARSHARLAAQSVLRRGRLAHAVRQVADPV 100 (904)
Q Consensus 38 ~~l~~~-~~~~~s~~v~W~~~~~----------~~g~i~~--~----~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~ 100 (904)
..|.|. ..+.+.+.|.|.+... .+|.+.. . .....+.....|...+........+.+.+
T Consensus 153 ~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V---- 228 (331)
T 3u83_A 153 LVATCTSANGKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNV---- 228 (331)
T ss_dssp EEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCE----
T ss_pred EEEEEEecCCcCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEE----
Confidence 346665 5577889999987421 1333211 1 11333444455555554433333444443
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCe-EEEeeCCccccCCCCceeecceEEEEe-ee--cCCeEEEEEEE
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPF-VKWRKGQNIELTPDDKLPVGRNVLTLD-RV--TESENYTCIAA 176 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~-i~W~k~~~~~~~~~~~~~~~~~~l~i~-~l--~d~g~Y~c~a~ 176 (904)
..+|.+...+.....+.+|+.++|.|.+.|.|.|. |.|+++ +..+... ....++.|.|. ++ +|+|.|+|.|.
T Consensus 229 -~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~-~~~~~~~--~~~~~~~L~i~~~v~~~d~G~Y~C~a~ 304 (331)
T 3u83_A 229 -QYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTL-NGSLPKG--VEAQNRTLFFKGPINYSLAGTYICEAT 304 (331)
T ss_dssp -EEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEET-TBSCCTT--EEEETTEEEECSCCCGGGCEEEEEEEE
T ss_pred -ecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEEC-CCccccc--ceecCcEEEEeCCCccccCeEEEEEEE
Confidence 45666664444337788999999999999999998 999999 6666443 34467789999 78 69999999999
Q ss_pred ecCcceEEEEEEEEE
Q psy8771 177 SVLGVIETSTIVKVQ 191 (904)
Q Consensus 177 n~~g~~~~~~~l~v~ 191 (904)
|..|..+..+.|.|.
T Consensus 305 N~~G~~~~~~~l~V~ 319 (331)
T 3u83_A 305 NPIGTRSGQVEVNIT 319 (331)
T ss_dssp ETTEEEEEEEEECCB
T ss_pred eccccceEEEEEEEe
Confidence 999999999999888
No 434
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.01 E-value=5.4e-09 Score=109.78 Aligned_cols=229 Identities=12% Similarity=0.073 Sum_probs=113.3
Q ss_pred CCCCcEEEeccC-CceEEEEeCCCCC----------------------------CCceecccccccccceEEEEeeeccC
Q psy8771 36 APRDVQVRPLSS-STMVIQWDEPETP----------------------------NGQITHPPTRAARSHARLAAQSVLRR 86 (904)
Q Consensus 36 ~p~~l~~~~~~~-~s~~v~W~~~~~~----------------------------~g~i~~~~~~~~~~~~~~~~~~~~~~ 86 (904)
....|.|...+. +...|.|.+.... ++.+....+...|...+.|...+...
T Consensus 19 ~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 98 (327)
T 2wng_A 19 ESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCVKFRKGS 98 (327)
T ss_dssp SCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEEEEESST
T ss_pred CcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEEEeecCCC
Confidence 445555555554 5568889765321 11233333444455555565555433
Q ss_pred Cee-----eeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCC--eEEEeeCCccccCCCCceee---c
Q psy8771 87 GRL-----AHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMP--FVKWRKGQNIELTPDDKLPV---G 156 (904)
Q Consensus 87 g~~-----~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p--~i~W~k~~~~~~~~~~~~~~---~ 156 (904)
... ..+.+.|.. ...+|.+. .| . ..+.+|+.+.|.|.+.|.|.+ .|+|+|+ +..+....+... .
T Consensus 99 ~~~~~~~~~~~~l~V~~--~p~~p~i~-~~-~-~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~-g~~l~~~~~~~~~~~~ 172 (327)
T 2wng_A 99 PDTEFKSGAGTELSVRA--KPSAPVVS-GP-A-ARATPQHTVSFTCESHGFSPRDITLKWFKN-GNELSDFQTNVDPVGE 172 (327)
T ss_dssp TCEEEEECCCEEEEEEB--CCCCCEEE-CC-S-SCBCTTCEEEEEEEEEEEBSSCCEEEEEET-TEECCCEEEEEECSSC
T ss_pred cceeEeecCcEEEEEEe--cCCCceee-cc-c-cccCCCCEEEEEEEEeCccCCCcEEEEEEC-CEEccccccccccccC
Confidence 211 123344432 23455665 33 3 667899999999999998876 8999999 766654332111 1
Q ss_pred ------ceEEEEeee--cCCeEEEEEEEecCcce---EEEEEEEEEeecCCCCCCCCCCcceEEEe---ecCCeEEEEEe
Q psy8771 157 ------RNVLTLDRV--TESENYTCIAASVLGVI---ETSTIVKVQCKYAPLLTLPVAPLDVKISE---VTATSVRLDWT 222 (904)
Q Consensus 157 ------~~~l~i~~l--~d~g~Y~c~a~n~~g~~---~~~~~l~v~~~~~~~~~~P~~p~~l~~~~---~~~~sv~l~W~ 222 (904)
...|.|... +++|.|+|.|.|..|.. ...+.+.+. ...+|. +.+.. .....++|.+.
T Consensus 173 ~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~--------v~~~P~-i~~~~~~~~~G~~v~l~C~ 243 (327)
T 2wng_A 173 SVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSET--------IRVPPT-LEVTQQPVRAENQVNVTCQ 243 (327)
T ss_dssp CSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGT--------BCBCCE-EEEEEECCSSTTCCEEEEE
T ss_pred CCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccc--------cCCCCE-EEEecCCcCCCCcEEEEEE
Confidence 224556555 35799999999988762 333333222 111221 11110 01223333333
Q ss_pred CCCccceEEEEEEEeCCCC------CCeEEeecc---eeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 223 YPSETLLYYVIQYKPKAAN------TPYSEISGI---ITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 223 ~~~~~~~~y~v~~~~~~~~------~~~~~~~~~---~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
..+.+.....|.|...+.. ......... ....+.|..+...+.+.|+|.|.|..|..
T Consensus 244 ~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~ 309 (327)
T 2wng_A 244 VRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPA 309 (327)
T ss_dssp EEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCC
T ss_pred EccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCC
Confidence 2211111112333322110 000000001 11457888888999999999999998753
No 435
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.01 E-value=1.2e-09 Score=93.88 Aligned_cols=87 Identities=21% Similarity=0.422 Sum_probs=69.7
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCC--CCeEEEeeCCccccCCCC-----ceeec-------ceEEEEeee--
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSP--MPFVKWRKGQNIELTPDD-----KLPVG-------RNVLTLDRV-- 165 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~~~~~~~~~-----~~~~~-------~~~l~i~~l-- 165 (904)
..+|.|...|.+ ..+.+|++++|.|.+.|.| .+.|.|+|+ +..+.... ++... .+.|.|.++
T Consensus 8 ~~~P~i~~~p~~-~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 85 (112)
T 3so5_A 8 FPXPQITVQPET-QSAIXGSDVSFTCSAASSSDSPMTFAWXXD-NEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEF 85 (112)
T ss_dssp CCSCEEEECCCC-EEECTTCCEEEEEEEEESCCCCCEEEEEET-TEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCG
T ss_pred CCCCeEEeCCCC-cEEECCCCEEEEEEEecCCCCCEEEEEccC-CcccccccccceeeeeccCCCccccceEEEEecccc
Confidence 568999999988 8999999999999999654 589999999 66555432 22222 478999999
Q ss_pred cCCeEEEEEEEecCcc-eEEEEEEEE
Q psy8771 166 TESENYTCIAASVLGV-IETSTIVKV 190 (904)
Q Consensus 166 ~d~g~Y~c~a~n~~g~-~~~~~~l~v 190 (904)
+|+|.|+|.|.|..|. .+..+.|.|
T Consensus 86 ~D~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 86 TSEGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred ccCCeEEEEEEeCCCcEEEeEEEEEe
Confidence 6999999999999998 456777765
No 436
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.01 E-value=6.1e-10 Score=96.48 Aligned_cols=89 Identities=27% Similarity=0.515 Sum_probs=68.0
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC------ceeecceEEEEe-----ee--cC
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD------KLPVGRNVLTLD-----RV--TE 167 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~------~~~~~~~~l~i~-----~l--~d 167 (904)
+..||.|...|.+ +.+.+|+.+.|.|.+.|.|.|.|.|+|+ +..+.... +....++.+.+. ++ +|
T Consensus 6 ~~~pP~i~~~p~~-~~v~~G~~v~L~C~~~g~P~p~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D 83 (117)
T 2v9t_A 6 EDFPPRIVEHPSD-LIVSKGEPATLNCKAEGRPTPTIEWYKG-GERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPD 83 (117)
T ss_dssp CCEEEEEEECCCC-EEECTTCCEEECCEEEEESCCEEEEEET-TEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSS
T ss_pred ccCCCeeEcCCCC-EEEcCCCcEEEEEECCccCCCeEEEEEC-CEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCc
Confidence 3678999999988 9999999999999999999999999999 65554331 233345554443 33 69
Q ss_pred CeEEEEEEEecCcceEE-EEEEEEE
Q psy8771 168 SENYTCIAASVLGVIET-STIVKVQ 191 (904)
Q Consensus 168 ~g~Y~c~a~n~~g~~~~-~~~l~v~ 191 (904)
+|.|+|.|.|..|...+ .+.|.+.
T Consensus 84 ~G~Y~C~a~N~~G~~~s~~~~l~~~ 108 (117)
T 2v9t_A 84 EGVYVCVARNYLGEAVSHDASLEVA 108 (117)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEC
T ss_pred CEEEEEEEEeCccceEeeeEEEEhh
Confidence 99999999999998654 4455554
No 437
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=99.01 E-value=1.7e-09 Score=89.92 Aligned_cols=95 Identities=17% Similarity=0.149 Sum_probs=72.6
Q ss_pred CCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEE
Q psy8771 715 VPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVL 793 (904)
Q Consensus 715 ~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~ 793 (904)
.|. +|.+|++..++.+++.|.|.++. ..++.+..|+|+|..... ...+. ..+.++|.||+|++.|.|.|+
T Consensus 7 ~Ps-~v~~l~v~~~t~~Sv~LsW~~p~--~~~~~i~~Y~v~~~~~~~------~~~~~~~~t~~~i~gL~PgT~Y~~~V~ 77 (104)
T 2dle_A 7 GAI-QVFDVTAVNISATSLTLIWKVSD--NESSSNYTYKIHVAGETD------SSNLNVSEPRAVIPGLRSSTFYNITVC 77 (104)
T ss_dssp SCC-BEEEEEEEEECSSCEEEEEEESC--STTCCSCEEEEEEECSSC------EEEEEESSSEEECCSCCSSCEEEEEEE
T ss_pred CCC-CCceEEEEEeecCEEEEEEcCCC--CCCCceEEEEEEEECCCC------eEEEcCCCCEEEECCCCCCCEEEEEEE
Confidence 344 57899999999999999999873 456667899999985421 22334 789999999999999999999
Q ss_pred EeeCCCCCCCCCcEEeecCCCCCCCC
Q psy8771 794 AGTSIGDGPSSYPITIRTHEDDPSEV 819 (904)
Q Consensus 794 a~~~~g~g~~s~~~~~~t~~~~P~~v 819 (904)
|......+. +..+.+.|.++++++.
T Consensus 78 A~~~~~~~~-p~~~~~~T~p~p~~~~ 102 (104)
T 2dle_A 78 PVLGDIEGT-PGFLQVHTPPVPSGPS 102 (104)
T ss_dssp EESSSCCCB-CEEEEEECCCCSCCCC
T ss_pred EEECCcccC-CeeEEEEccCCCCCCC
Confidence 996544443 3457788887777653
No 438
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.01 E-value=4e-09 Score=102.49 Aligned_cols=149 Identities=15% Similarity=0.229 Sum_probs=99.4
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC------------------------------CCceecccccccccceEEEEeeecc
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP------------------------------NGQITHPPTRAARSHARLAAQSVLR 85 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~------------------------------~g~i~~~~~~~~~~~~~~~~~~~~~ 85 (904)
....|.|...+.+...|.|.+.... +|.+....+...|.....|...+..
T Consensus 15 ~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~ 94 (208)
T 3r4d_A 15 NNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYTLDMTDEN 94 (208)
T ss_dssp CCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEEEEEECSS
T ss_pred CcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEEEEEEccc
Confidence 4556666666677788999765221 2344444445555555556555543
Q ss_pred CCe-eeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee--cceEEEE
Q psy8771 86 RGR-LAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV--GRNVLTL 162 (904)
Q Consensus 86 ~g~-~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~--~~~~l~i 162 (904)
.+. .....+.|... ...|.+...+. . +..|+.+.|.|.+.|.| |.|.|+++ +..+....++.. +++.|.|
T Consensus 95 ~~~~~~~~~l~V~~~--~~~p~i~~~~~--~-~~~g~~v~l~C~~~~~p-p~i~W~~~-g~~l~~~~~~~~~~~~~~L~i 167 (208)
T 3r4d_A 95 YRRTQATVRFHVHQP--VTQPFLQVTNT--T-VKELDSVTLTCLSNDIG-ANIQWLFN-SQSLQLTERMTLSQNNSILRI 167 (208)
T ss_dssp CEEEEEEEEEEEECC--CCCCEEEESCS--S-CCTTCCEEEEEECSCTT-CEEEEEET-TEECCCCSSEEEETTTTEEEE
T ss_pred CceeEEEEEEEeccC--CCCCEEecCCc--e-EeeCCCEEEEEECCCCC-CceEEEEC-CEeCCCCCCeEEcCCCCEEEE
Confidence 332 23444454422 33466665544 3 88999999999999977 89999999 777776666654 4578999
Q ss_pred eee--cCCeEEEEEEEecCcceEE-EEEEEEE
Q psy8771 163 DRV--TESENYTCIAASVLGVIET-STIVKVQ 191 (904)
Q Consensus 163 ~~l--~d~g~Y~c~a~n~~g~~~~-~~~l~v~ 191 (904)
.++ +|+|.|+|.|.|..|...+ ...|.|.
T Consensus 168 ~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~ 199 (208)
T 3r4d_A 168 DPIKREDAGEYQCEISNPVSVRRSNSIKLDII 199 (208)
T ss_dssp SSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred eccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence 999 6999999999999998553 4444444
No 439
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.00 E-value=2.7e-09 Score=107.20 Aligned_cols=123 Identities=14% Similarity=0.182 Sum_probs=77.2
Q ss_pred eecccccccccceEEEEeeeccCCe-----eeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEE
Q psy8771 64 ITHPPTRAARSHARLAAQSVLRRGR-----LAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVK 138 (904)
Q Consensus 64 i~~~~~~~~~~~~~~~~~~~~~~g~-----~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~ 138 (904)
+....+...|.....|...+..... ...+.+.|... ..+|.+...+...+.+.+|+.+.|.|.+.|.|.|.|+
T Consensus 92 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~--~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~ 169 (250)
T 2fbo_J 92 LRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH--TPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVT 169 (250)
T ss_dssp EEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTT--SCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEEE
T ss_pred EEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEecc--CCCCeEEEecCceEEecCCCcEEEEEEecCCCCCeeE
Confidence 3444444555555555555433322 22444555432 2234444333333888899999999999999999999
Q ss_pred EeeCCccccCCC------------------------Cceee-cceEEEEeee--cCCeEEEEEEEecCc---ceEEEEEE
Q psy8771 139 WRKGQNIELTPD------------------------DKLPV-GRNVLTLDRV--TESENYTCIAASVLG---VIETSTIV 188 (904)
Q Consensus 139 W~k~~~~~~~~~------------------------~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n~~g---~~~~~~~l 188 (904)
|+|+ +..+... .+... ..+.|.|.++ +|+|.|+|.|.|..| ....++.|
T Consensus 170 W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l 248 (250)
T 2fbo_J 170 WYTG-PTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATGQGELDADRSSTIL 248 (250)
T ss_dssp EEEE-EECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEE
T ss_pred EEeC-CCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCCccccCccceeEEE
Confidence 9999 6555431 11111 3478999999 699999999999555 44445444
Q ss_pred E
Q psy8771 189 K 189 (904)
Q Consensus 189 ~ 189 (904)
.
T Consensus 249 ~ 249 (250)
T 2fbo_J 249 K 249 (250)
T ss_dssp E
T ss_pred e
Confidence 3
No 440
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.00 E-value=9.9e-09 Score=97.34 Aligned_cols=147 Identities=14% Similarity=0.183 Sum_probs=95.4
Q ss_pred CCCCcEEEeccCC--ceEEEEeCCCCC-------CCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCe
Q psy8771 36 APRDVQVRPLSSS--TMVIQWDEPETP-------NGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQ 106 (904)
Q Consensus 36 ~p~~l~~~~~~~~--s~~v~W~~~~~~-------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~ 106 (904)
....|.|...+.+ .+.+.|.+.... ++.......+..+.....|...+ .....+.+.+ ..+|.
T Consensus 14 ~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~~~~~l~i~~~~d~G~Y~C~~~n---~~~~~~~l~V-----~~~P~ 85 (184)
T 3b5h_A 14 SKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLP---EPMGTANIQL-----HGPPR 85 (184)
T ss_dssp TEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCCSEEEEEECGGGCCEEEEEEEES---TTSCEEEEEE-----CCSCC
T ss_pred CCEEEEEECCCCCCCceEEEEEeCCEEeecccccCCcEEEEEechhhCeEEEEEEEC---CcCcEEEEEE-----ecCCc
Confidence 3444555544333 448999875211 11111111123344444455544 1123334443 56788
Q ss_pred EEcCCCCceEEecCCCeEEEEEEccCC-CCeEEEee---CCccccCCC--Cceee----cceEEEEeeec---CCeEEEE
Q psy8771 107 FSIPPPALLEVMLDSPLNLSCVAVGSP-MPFVKWRK---GQNIELTPD--DKLPV----GRNVLTLDRVT---ESENYTC 173 (904)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p-~p~i~W~k---~~~~~~~~~--~~~~~----~~~~l~i~~l~---d~g~Y~c 173 (904)
+...+.. ..+.+|+.+.|.|.+.|.| .|.|.|+| ++...+... .++.+ ....|.|.++. |+|.|+|
T Consensus 86 ~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 164 (184)
T 3b5h_A 86 VKAVKSS-EHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRC 164 (184)
T ss_dssp CEESCSE-EEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEE
T ss_pred eeecCCC-cEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEE
Confidence 8888866 8899999999999999999 79999999 534444322 44443 23489999884 8999999
Q ss_pred EEEecCcceEEEEEEEEE
Q psy8771 174 IAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 174 ~a~n~~g~~~~~~~l~v~ 191 (904)
.|.|..|.....+.|.|.
T Consensus 165 ~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 165 NGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp EEEETTEEEEEEEEEEEC
T ss_pred EEEeCCCcceEEEEEEEe
Confidence 999999999988888876
No 441
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.00 E-value=3.7e-09 Score=100.34 Aligned_cols=70 Identities=17% Similarity=0.210 Sum_probs=62.4
Q ss_pred eEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771 115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
..+.+|+.++|.|.+.|.|.|.|.|+++ +.. +....+.|.|.++ +|+|.|+|.|.|..|..+..+.|.|.
T Consensus 107 ~~v~~g~~~~l~C~~~~~p~~~v~W~~~-~~~------~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~ 178 (184)
T 2ny1_B 107 THLLQGQSLTLTLESPPGSSPSVQCRSP-RGK------NIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVL 178 (184)
T ss_dssp SEEETTCCEEEEEECCTTCCCEEEEECT-TSC------EEEESSEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ceeecCCCEEEEEEcCCCCCCEEEEEeC-CCc------cccCceEEEEecCCcCCCeEEEEEEEECCceEEEEEEEEEE
Confidence 6788999999999999999999999999 432 2446789999999 69999999999999999999999998
No 442
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.00 E-value=8.3e-10 Score=92.73 Aligned_cols=85 Identities=20% Similarity=0.275 Sum_probs=67.5
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCC-Cceeec-ce---EEEEeee--cCCeEEEE
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPD-DKLPVG-RN---VLTLDRV--TESENYTC 173 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~-~~~~~~-~~---~l~i~~l--~d~g~Y~c 173 (904)
...+|.|+..+.+.+.+.+|+.+.|.|.+ +.|.+.|.|+|+ +..+..+ .++.+. ++ .|.|.++ +|+|.|+|
T Consensus 12 ~~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~-g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 89 (104)
T 1pd6_A 12 EKKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKN-GQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQC 89 (104)
T ss_dssp CSTTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEES-SSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEE
T ss_pred ccCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEEC-CEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEE
Confidence 46778888777765889999999999999 799999999999 6666655 555542 33 8999998 69999999
Q ss_pred EEEecCcceEEEEEEEEE
Q psy8771 174 IAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 174 ~a~n~~g~~~~~~~l~v~ 191 (904)
.| |.....+.|.|.
T Consensus 90 ~a----~~~~~~~~l~V~ 103 (104)
T 1pd6_A 90 VV----GGEKCSTELFVK 103 (104)
T ss_dssp EE----TTEEECCEEEEE
T ss_pred EE----CCCcEEEEEEEe
Confidence 99 445566677765
No 443
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=98.99 E-value=2.2e-09 Score=104.69 Aligned_cols=149 Identities=20% Similarity=0.208 Sum_probs=97.1
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC----------------------CCceecccccccccceEEEEeeeccCC--eeee
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP----------------------NGQITHPPTRAARSHARLAAQSVLRRG--RLAH 91 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~----------------------~g~i~~~~~~~~~~~~~~~~~~~~~~g--~~~~ 91 (904)
....|.|...+.+...|.|.+.... ++.+....+...|.....|...+.... ....
T Consensus 17 ~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~ 96 (212)
T 1f97_A 17 ESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVS 96 (212)
T ss_dssp CCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEEEEEEEETTSSSEEEEE
T ss_pred CCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEEEEEEEccCCCcccEEE
Confidence 5666777766778889999765332 122333334444555455555443321 2233
Q ss_pred eeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEE-EccCCCCeEEEeeCCcc-ccCCCCc---------ee--ecce
Q psy8771 92 AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCV-AVGSPMPFVKWRKGQNI-ELTPDDK---------LP--VGRN 158 (904)
Q Consensus 92 ~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~-~~g~p~p~i~W~k~~~~-~~~~~~~---------~~--~~~~ 158 (904)
+.+.+ ..+|.+...+.. ..+.+|+.+.|.|. +.|.|.|.|.|+++ +. .+....+ +. ...+
T Consensus 97 ~~l~V-----~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~i~W~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~ 169 (212)
T 1f97_A 97 IHLTV-----LVPPSKPTISVP-SSVTIGNRAVLTCSEHDGSPPSEYSWFKD-GISMLTADAKKTRAFMNSSFTIDPKSG 169 (212)
T ss_dssp EEEEE-----EBCCCCCEEECC-SEEETTSCEEEEEECSCCBSCCEEEEEET-TEESBC-----CBSCSSSCEEECTTTC
T ss_pred EEEEE-----EcCCCCcccCCc-cccCCCCeEEEEEEcccCcCCCEEEEEeC-CcccccccccccccccCceeEecCCCc
Confidence 34444 344554444445 67899999999999 79999999999999 65 6654322 22 2467
Q ss_pred EEEEeee--cCCeEEEEEEEecCcce--EEEEEEEEE
Q psy8771 159 VLTLDRV--TESENYTCIAASVLGVI--ETSTIVKVQ 191 (904)
Q Consensus 159 ~l~i~~l--~d~g~Y~c~a~n~~g~~--~~~~~l~v~ 191 (904)
.|.|.++ +|+|.|+|.|.|..|.. +....|.|.
T Consensus 170 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~ 206 (212)
T 1f97_A 170 DLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 206 (212)
T ss_dssp CEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEE
T ss_pred eEEEEecChhhCcEEEEEEccccCCccccceEEEEEE
Confidence 8999999 69999999999999987 445556655
No 444
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.99 E-value=1.1e-09 Score=90.25 Aligned_cols=82 Identities=16% Similarity=0.296 Sum_probs=66.6
Q ss_pred CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCC-eEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 202 VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTP-YSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 202 ~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
++|.+|++...+.+++.|+|+++.+.+.+|.|.|+..+.... .........++++|.+|+|++.|.|+|+|.|..|.+.
T Consensus 3 ~~P~~l~~~~~~~~si~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~A~~~~g~s~ 82 (94)
T 1j8k_A 3 DRPKGLAFTDVDVDSIKIAWESPQGQVSRYRVTYSSPEDGIHELFPAPDGEEDTAELQGLRPGSEYTVSVVALHDDMESQ 82 (94)
T ss_dssp CCCCCCEEEEEETTEEEEECCCCSSCCSCEEEEEEETTTEEEEECCCCCSSCCEEEECSCCCCSEEEEEEEECSSSCCCC
T ss_pred CCCCccEEEeecCCEEEEEEcCCCCCcceEEEEEEeCCCCCceEEecCCCCccEEEeCCCCCCCEEEEEEEEEcCCCcCC
Confidence 578999999999999999999998889999999987643211 1112234568899999999999999999999999876
Q ss_pred CCC
Q psy8771 281 PSS 283 (904)
Q Consensus 281 ~s~ 283 (904)
+..
T Consensus 83 p~~ 85 (94)
T 1j8k_A 83 PLI 85 (94)
T ss_dssp CEE
T ss_pred CEE
Confidence 543
No 445
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.99 E-value=8.4e-10 Score=93.02 Aligned_cols=83 Identities=31% Similarity=0.493 Sum_probs=70.1
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceee-cc---eEEEEeee--cCCeEEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPV-GR---NVLTLDRV--TESENYTCIA 175 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~-~~---~~l~i~~l--~d~g~Y~c~a 175 (904)
..||.|...+.+ +.+.+|+++.|.|.+.|.|.+ |.|+|+ +..+..+.++.+ .+ ..|.|.++ +|+|.|+|.
T Consensus 6 ~~pp~~~~~~~~-~~v~~G~~v~l~C~~~~~p~~-v~W~k~-~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~- 81 (103)
T 2e7b_A 6 SGPVRFQEALKD-LEVLEGGAATLRCVLSSVAAP-VKWCYG-NNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS- 81 (103)
T ss_dssp CCCCCCTBCCCC-EEEESSSCEEEEEECSSCCCS-CEEEES-SSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE-
T ss_pred CCCCEEEecCcc-EEEECCCcEEEEEEEeCCCCC-eEEEEC-CEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE-
Confidence 568888888888 999999999999999999999 999999 777766666654 22 25999999 699999998
Q ss_pred EecCcceEEEEEEEEE
Q psy8771 176 ASVLGVIETSTIVKVQ 191 (904)
Q Consensus 176 ~n~~g~~~~~~~l~v~ 191 (904)
.|.....+.|.|.
T Consensus 82 ---~g~~~~~~~l~V~ 94 (103)
T 2e7b_A 82 ---FGDQTTSATLTVT 94 (103)
T ss_dssp ---CSSCBCCBCEEEE
T ss_pred ---ECCcEEEEEEEEE
Confidence 5677778888888
No 446
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.99 E-value=5.8e-11 Score=100.24 Aligned_cols=92 Identities=26% Similarity=0.454 Sum_probs=74.2
Q ss_pred CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS 797 (904)
Q Consensus 719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~ 797 (904)
+|.+|++..++.+++.|+|++| ++.+.+|.|+|+....... .....+. ..+.++|.+|+|++.|.|+|+|.+.
T Consensus 10 ~P~~l~v~~~t~~si~lsW~~p-----~g~i~~Y~v~y~~~~~~~~-~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~ 83 (105)
T 2ekj_A 10 PPSNLALASETPDSLQVSWTPP-----LGRVLHYWLTYAPASGLGP-EKSVSVPGARSHVTLPDLQAATKYRVLVSAIYA 83 (105)
T ss_dssp CCEEEEEEEEETTEEEEEEECC-----SSCCSBBCBBCCCTTSCSC-CCCBCCBTTSSEEEECSCCSSCCCBCBBCBBCS
T ss_pred CCCceEEEeCCCCEEEEEEeCC-----CCcceEEEEEEEECCCCCc-cEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeC
Confidence 6899999999999999999998 3679999999987654321 1223344 7899999999999999999999999
Q ss_pred CCCCCCCCcEEeecC-CCCCC
Q psy8771 798 IGDGPSSYPITIRTH-EDDPS 817 (904)
Q Consensus 798 ~g~g~~s~~~~~~t~-~~~P~ 817 (904)
.|.|..+. ..++|. ++.|.
T Consensus 84 ~g~g~~s~-~~~~T~~p~~P~ 103 (105)
T 2ekj_A 84 AGRSEAVS-ATGQTACPSGPS 103 (105)
T ss_dssp SCBCCCBC-CBCCCCCCCCCC
T ss_pred CccCCccc-cEEEccCCCCCC
Confidence 99998876 446676 66653
No 447
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.98 E-value=7e-09 Score=108.17 Aligned_cols=238 Identities=12% Similarity=0.107 Sum_probs=134.8
Q ss_pred eEEecCCCeEEEEEEc-cCCCCeEEEeeCCccccCCCCceeec----ceEEEEeee--cCCeEEEEEEEecCcceEEEEE
Q psy8771 115 LEVMLDSPLNLSCVAV-GSPMPFVKWRKGQNIELTPDDKLPVG----RNVLTLDRV--TESENYTCIAASVLGVIETSTI 187 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~-g~p~p~i~W~k~~~~~~~~~~~~~~~----~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~ 187 (904)
+.+.+|+.+.|.|... |.|.+.|+|+|+ +..+....|+.+. ...|.|.++ +|+|.|+|.|.|..|... +..
T Consensus 11 ~~v~eg~~v~l~~~~~~~~p~~~v~W~k~-~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~ 88 (312)
T 2y23_A 11 VNVDDDGVISLNFECDKMTPKSEFSWSKD-YVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYL 88 (312)
T ss_dssp EEECTTCCEEEEEECSSCCTTCCEEEEET-TEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEE
T ss_pred EEEecCCeEEEEEEEeCCCCCcEEEEEEC-CEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEE
Confidence 7888999999999886 689999999999 7777777777652 268999999 699999999999988654 445
Q ss_pred EEEEeecC-C----CCCCCCCCc----ceEEEeecCCeEEEEEeCC-CccceEEEEEEEeCC----CCCCeEEee--cce
Q psy8771 188 VKVQCKYA-P----LLTLPVAPL----DVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKA----ANTPYSEIS--GII 251 (904)
Q Consensus 188 l~v~~~~~-~----~~~~P~~p~----~l~~~~~~~~sv~l~W~~~-~~~~~~y~v~~~~~~----~~~~~~~~~--~~~ 251 (904)
|.|..... . ....|..+. ...+ .....+.|.+... +.+.. .+.|...+ ....+.... ...
T Consensus 89 l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v--~~G~~v~l~C~~~~~~p~~--~v~W~~~~~~i~~~~~~~~~~~~~~~ 164 (312)
T 2y23_A 89 IDEEELKRLLALSHEHKFPTVPVKSELAVEI--LEKGQVRFWMQAEKLSGNA--KVNYIFNEKEIFEGPKYKMHIDRNTG 164 (312)
T ss_dssp ECHHHHHHHHHHHHHHHSCBCCEEEEEEEEE--CSSSCEEEEEEESCCCSSC--EEEEEETTEEECSSSSCEEEEETTTT
T ss_pred EEEeeeeeeecccccCCCCccccccCCceEE--eeCCCEEEEEEEEeCCCCC--EEEEEECCEECeeCCcEEEEEccCCC
Confidence 55431000 0 000222111 2222 2334566666544 22222 23343322 112222221 123
Q ss_pred eceEEEcCCCCCCeEEEEEEEEcCCCCCCCCCCeEEecCC----------------CCCCCCCC---ceEecccCCCeeE
Q psy8771 252 TTYYTVRNLSPYTEYEFYIIAVNNLGRGPPSSPAVITTGE----------------TEPGTAPR---DVQVRPLSSSTMV 312 (904)
Q Consensus 252 ~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~~s~~~~~~t~~----------------~~p~~~p~---~l~~~~~~~~~v~ 312 (904)
...+.|.++...+.+.|+|.|.+..+... ....... .....+|. .+.........+.
T Consensus 165 ~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~G~~~~ 240 (312)
T 2y23_A 165 IIEMFMEKLQDEDEGTYTFQLQDGKATNH----STVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLSWEVTGECNVL 240 (312)
T ss_dssp EEEEEESCCCGGGCEEEEEEEESSSCEEE----EEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEEETTTEEE
T ss_pred EEEEEEccCCcccCEeEEEEEEeCCceEE----EEEEEcchhhhhhcccccccccchhhccCCceeecceEEEeCCCEEE
Confidence 35599999999999999999987543221 1111000 00000111 0111222334555
Q ss_pred EEecCCCCCCc-eeeEEEEE----------eeceeEEEEEcCCCCCcEEEEEEEEEcCCCC
Q psy8771 313 IQWDEPETPNG-QITAKHHR----------RIGLVETYSLTGLYPNTLYYIWLAAQSPRGE 362 (904)
Q Consensus 313 l~W~~p~~~~~-~~~~~~~~----------~~~~~~~~~~~~L~~~~~Y~v~v~a~~~~g~ 362 (904)
|.+.....+.. .+.++... .......+.|..+.....-.+++.|.|..|.
T Consensus 241 l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~ 301 (312)
T 2y23_A 241 LKCKVANIKKETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGK 301 (312)
T ss_dssp EEEEEESCCSSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTCC
T ss_pred EEEEEcCCCCCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCCc
Confidence 55554333332 34443210 0122357888899888888899999998885
No 448
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=98.98 E-value=1.3e-09 Score=103.47 Aligned_cols=143 Identities=15% Similarity=0.178 Sum_probs=97.0
Q ss_pred eEEecCCCeEEEEEEccCCCCeEEEeeCCcc-ccC------------CCCceeec-------ceEEEEeee--cCCeEEE
Q psy8771 115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNI-ELT------------PDDKLPVG-------RNVLTLDRV--TESENYT 172 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~-~~~------------~~~~~~~~-------~~~l~i~~l--~d~g~Y~ 172 (904)
+.+.+|++++|.|.+.|.|.+.|.|+|++.. .+. ...|+... ..+|.|.++ +|+|.|+
T Consensus 5 v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 84 (184)
T 2ny1_B 5 VLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYI 84 (184)
T ss_dssp EEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEE
T ss_pred EEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEE
Confidence 7889999999999999999999999998432 110 12233321 445999999 6999999
Q ss_pred EEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeeccee
Q psy8771 173 CIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIIT 252 (904)
Q Consensus 173 c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~ 252 (904)
|.+.|..| .+.|.|. ..+.++ ...+ .....++|.+...+.+.. .+.|...+. .. ....
T Consensus 85 C~~~~~~~----~~~l~V~-------~~~~~~-~~~v--~~g~~~~l~C~~~~~p~~--~v~W~~~~~--~~----~~~~ 142 (184)
T 2ny1_B 85 CEVEDQKE----EVQLLVF-------GLTANS-DTHL--LQGQSLTLTLESPPGSSP--SVQCRSPRG--KN----IQGG 142 (184)
T ss_dssp EEETTEEE----EEEEEEE-------EEEESS-CSEE--ETTCCEEEEEECCTTCCC--EEEEECTTS--CE----EEES
T ss_pred EEEEcCCC----cEEEEEE-------EecCCC-Ccee--ecCCCEEEEEEcCCCCCC--EEEEEeCCC--cc----ccCc
Confidence 99998755 4456665 111112 2233 334567777777544433 455554322 21 1234
Q ss_pred ceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 253 TYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 253 ~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
..+.|.++...+.+.|+|.|.|..|..
T Consensus 143 ~~L~i~~v~~~d~G~Y~C~a~n~~~~~ 169 (184)
T 2ny1_B 143 KTLSVSQLELQDSGTWTCTVLQNQKKV 169 (184)
T ss_dssp SEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred eEEEEecCCcCCCeEEEEEEEECCceE
Confidence 779999999999999999999876654
No 449
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=98.98 E-value=3.5e-09 Score=88.03 Aligned_cols=81 Identities=31% Similarity=0.457 Sum_probs=68.3
Q ss_pred CCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCe-EEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 201 PVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPY-SEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 201 P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~-~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
+.+|.++++...+.+++.|+|.++.+.+.+|.|.|+.......+ ........+.+.|.+|.|++.|.|+|+|.|..|.+
T Consensus 2 ~~~P~~l~v~~~~~~sv~l~W~~p~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~G~s 81 (98)
T 3teu_A 2 LDAPTDLQVTNVTDTSITVSWTPPSATITGYRITYTPSNGPGEPKELTVPPSSTSVTITGLTPGVEYVVSVYALKDNQES 81 (98)
T ss_dssp CCCCEEEEEEEECSSCEEEEEECCSSCCSEEEEEEEETTSCSCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEEC
T ss_pred CCCCCceEEEEecCCEEEEEEeCCCCcccEEEEEEEECCCCCceEEEEcCCCcCEEEecCCCCCCEEEEEEEEEeCCCCC
Confidence 67899999999999999999999988999999999975443333 33344566899999999999999999999999977
Q ss_pred CC
Q psy8771 280 PP 281 (904)
Q Consensus 280 ~~ 281 (904)
.+
T Consensus 82 ~p 83 (98)
T 3teu_A 82 PP 83 (98)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 450
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=98.98 E-value=1.9e-09 Score=89.68 Aligned_cols=80 Identities=24% Similarity=0.441 Sum_probs=66.6
Q ss_pred CCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEeeC
Q psy8771 719 PPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGTS 797 (904)
Q Consensus 719 ~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~~ 797 (904)
+|.++.+...+.+++.|+|.+| ++.+.+|.|+|+...+... .....+. ..+.++|.+|.|++.|.|+|+|.|.
T Consensus 4 ~P~~l~v~~~~~~sv~l~W~~p-----~~~i~~Y~v~y~~~~~~~~-~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 77 (98)
T 3teu_A 4 APTDLQVTNVTDTSITVSWTPP-----SATITGYRITYTPSNGPGE-PKELTVPPSSTSVTITGLTPGVEYVVSVYALKD 77 (98)
T ss_dssp CCEEEEEEEECSSCEEEEEECC-----SSCCSEEEEEEEETTSCSC-CEEEEECTTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred CCCceEEEEecCCEEEEEEeCC-----CCcccEEEEEEEECCCCCc-eEEEEcCCCcCEEEecCCCCCCEEEEEEEEEeC
Confidence 6899999999999999999988 3779999999997654322 2344455 8899999999999999999999999
Q ss_pred CCCCCCC
Q psy8771 798 IGDGPSS 804 (904)
Q Consensus 798 ~g~g~~s 804 (904)
.|.|.+.
T Consensus 78 ~G~s~p~ 84 (98)
T 3teu_A 78 NQESPPL 84 (98)
T ss_dssp TEECCCE
T ss_pred CCCCCCe
Confidence 9977543
No 451
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=98.97 E-value=6.5e-09 Score=84.27 Aligned_cols=85 Identities=29% Similarity=0.432 Sum_probs=67.9
Q ss_pred CCCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEe
Q psy8771 481 PGTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFT 560 (904)
Q Consensus 481 p~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~ 560 (904)
+|.+|.+|.+...+.+++.|+|+++.+. +.+.+|+|+. .+ . .......+++.+.+|.|++.|.|+|+|+|
T Consensus 3 ~P~~P~~l~~~~~~~~sv~L~W~~~~~~-~~i~~Y~v~~--~~----~---~~~~~~~~~~~~~~L~~~t~Y~~~V~A~n 72 (88)
T 1k85_A 3 APTAPTNLASTAQTTSSITLSWTASTDN-VGVTGYDVYN--GT----A---LATTVTGTTATISGLAADTSYTFTVKAKD 72 (88)
T ss_dssp SCCCCEEEEEEEECSSCEEEEEECCSCC-SSEEEEEEEE--SS----S---EEEEESSSEEEECCCCSSCEEEEEEEEEE
T ss_pred CcCCCCccEEEeccCCEEEEEECCCCCC-CCccEEEEEE--CC----E---EEeecCCCEEEeCCCCCCCEEEEEEEEEe
Confidence 4578999999999999999999998753 4589999984 11 1 12223457899999999999999999999
Q ss_pred CCCC-CCCCCcEEEec
Q psy8771 561 SVGP-GPLSAPVLVKT 575 (904)
Q Consensus 561 ~~g~-~~~S~~~~~~t 575 (904)
..|. +..|..+.++|
T Consensus 73 ~~G~~s~~S~~v~v~T 88 (88)
T 1k85_A 73 AAGNVSAASNAVSVKT 88 (88)
T ss_dssp TTTEECCCCCCEEEEC
T ss_pred CCCCcCCCCCCEEEEC
Confidence 9997 77888777654
No 452
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.97 E-value=1.8e-09 Score=109.55 Aligned_cols=150 Identities=15% Similarity=0.183 Sum_probs=102.2
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEcc-CCCC--eEEEeeCCccccCCCCceeecceEEEEeee-----cCCeE--EE
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVG-SPMP--FVKWRKGQNIELTPDDKLPVGRNVLTLDRV-----TESEN--YT 172 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g-~p~p--~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l-----~d~g~--Y~ 172 (904)
.+|++.. . ..+.+|+.++|.|.+.| .|.| .|+|+|+ +..+.. ++...+..+.|..+ +|+|. |+
T Consensus 5 ~~p~~~~---~-~~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~-~~~l~~--~~~~~~~~~~~~~~~~~~~~d~g~g~Y~ 77 (265)
T 2oz4_A 5 TPPQLVS---P-RVLEVDTQGTVVCSLDGLFPVSEAQVHLALG-DQRLNP--TVTYGNDSFSAKASVSVTAEDEGTQRLT 77 (265)
T ss_dssp SCCEEEC---C-SEEETTEEEEEEEEEESCSCGGGCEEEEEET-TEECCC--EEEECSSEEEEEEEEEECGGGCEEEEEE
T ss_pred CCCcccc---C-ceEecCCCEEEEEEccCCCCCcceEEEEEeC-CEECCc--eEeeCCCeEEEEeecccccccCCcceEE
Confidence 4566653 2 46789999999999999 8877 9999999 666654 44455667777665 78885 99
Q ss_pred EEEEecCcceEEEEEEEEEeecCCCCCCCCC---CcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeec
Q psy8771 173 CIAASVLGVIETSTIVKVQCKYAPLLTLPVA---PLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISG 249 (904)
Q Consensus 173 c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~---p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~ 249 (904)
|.|.|..|..+..+.|.|. ..|.+ +....+ .....++|.+... +.. .+.| .+.. . ...
T Consensus 78 C~a~n~~~~~~~~~~l~V~-------~~p~p~~~~~~~~v--~~G~~v~l~C~~~--p~~--~i~W--~g~~--~--~~~ 138 (265)
T 2oz4_A 78 CAVILGNQSQETLQTVTIY-------SFPAPNVILTKPEV--SEGTEVTVKCEAH--PRA--KVTL--NGVP--A--QPL 138 (265)
T ss_dssp EEEEETTEEEEEEEEEEEE-------CCCCCEEEESCSEE--ETTCEEEEEEECC--TTS--EEEE--SSCS--S--SCC
T ss_pred EEEecCCCCcEEEEEEEEe-------CCCCceeecCCcee--cCCCcEEEEEEcc--CCC--EEEE--CCEE--c--cCC
Confidence 9999999998889999988 33321 112222 2256777777765 222 2445 2211 1 111
Q ss_pred ceeceEEEcCCCCCCeEEEEEEEEcCC-CC
Q psy8771 250 IITTYYTVRNLSPYTEYEFYIIAVNNL-GR 278 (904)
Q Consensus 250 ~~~~~~~i~~L~p~~~Y~~~v~a~n~~-g~ 278 (904)
.....+.+..+...+.+.|+|.|.|.. |.
T Consensus 139 ~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~ 168 (265)
T 2oz4_A 139 GPRAQLLLKATPEDNGRSFSCSATLEVAGQ 168 (265)
T ss_dssp SSEECCEEECCGGGTTEEEEEEEEEECSSS
T ss_pred CCcEEEEEccccccCCceEEEEEEcCCCCC
Confidence 233567888899999999999998644 54
No 453
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=98.97 E-value=2e-09 Score=89.14 Aligned_cols=80 Identities=31% Similarity=0.432 Sum_probs=66.4
Q ss_pred CCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCC-eEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 202 VAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTP-YSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 202 ~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~-~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
++|.+|++...+.+++.|+|.++.+.+.+|.|.|+..+.... .........++++|.+|+|++.|.|+|+|.|..|.|.
T Consensus 3 p~P~~l~v~~~t~~Sv~lsW~~p~~~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~l~gL~P~t~Y~~~V~A~~~~g~S~ 82 (98)
T 3tes_A 3 PAPKNLVVSEVTEDSLRLSWTAPDAAFDSFMIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVKGGHRSN 82 (98)
T ss_dssp CCCEEEEEESCCSSCEEEEEECCTTSCSEEEEEEEETTBCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEETTEEBC
T ss_pred CCCCceEEEecCCCeEEEEecCCcCccceEEEEEEECCCCCceEEEEcCCCcCEEEECCCCCCCEEEEEEEEEeCCcccC
Confidence 478899999999999999999998889999999998753222 2233344568999999999999999999999988775
Q ss_pred C
Q psy8771 281 P 281 (904)
Q Consensus 281 ~ 281 (904)
+
T Consensus 83 p 83 (98)
T 3tes_A 83 P 83 (98)
T ss_dssp C
T ss_pred C
Confidence 4
No 454
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.97 E-value=1.3e-08 Score=101.33 Aligned_cols=164 Identities=10% Similarity=0.132 Sum_probs=95.7
Q ss_pred EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-ccc---------------cCCCCceee-----cceEEEEeee
Q psy8771 107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIE---------------LTPDDKLPV-----GRNVLTLDRV 165 (904)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~---------------~~~~~~~~~-----~~~~l~i~~l 165 (904)
+...|.. +.+.+|++++|.|. .|.|.+.|.|+|+. +.. .....|+.+ ...+|.|.++
T Consensus 3 v~q~p~~-~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v 80 (238)
T 2p1y_A 3 VTQSPRN-KVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELA 80 (238)
T ss_dssp EEEECSE-EEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSC
T ss_pred ceECccc-eEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecC
Confidence 4455666 89999999999999 88999999999951 110 011234443 2458999999
Q ss_pred --cCCeEEEEEEEecCcce-----EEEEEEEEEeecC---C-----CCCCCCCCcceEEEeecCCeEEEEEeCCCccceE
Q psy8771 166 --TESENYTCIAASVLGVI-----ETSTIVKVQCKYA---P-----LLTLPVAPLDVKISEVTATSVRLDWTYPSETLLY 230 (904)
Q Consensus 166 --~d~g~Y~c~a~n~~g~~-----~~~~~l~v~~~~~---~-----~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~ 230 (904)
+|+|.|.|.|.|..|.. .....|.|..... + ....-..|..+.+ ....+++|.+...+.+..
T Consensus 81 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v--~~G~~v~L~C~~~~~p~~- 157 (238)
T 2p1y_A 81 TPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTV--WEGETAILNCSYENSAFD- 157 (238)
T ss_dssp CGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEE--ETTSCEEEEEECCCTTCC-
T ss_pred CcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEE--eCCCeEEEEEEEecCCCC-
Confidence 69999999999986531 1344666661100 0 0000012333333 334567777766533322
Q ss_pred EEEEEEeCCCC------------------CCeEEe--ecceeceEEEcCCCCCCeEEEEEEEEcCC
Q psy8771 231 YVIQYKPKAAN------------------TPYSEI--SGIITTYYTVRNLSPYTEYEFYIIAVNNL 276 (904)
Q Consensus 231 y~v~~~~~~~~------------------~~~~~~--~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~ 276 (904)
.|.|.....+ ..+... .......|.|.++++.+.+.|.|.|.|..
T Consensus 158 -~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 158 -YFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp -EEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred -cEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 2333322111 111111 11223679999999999999999999973
No 455
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=98.97 E-value=3.8e-09 Score=116.26 Aligned_cols=161 Identities=14% Similarity=0.158 Sum_probs=92.4
Q ss_pred cCCCCceEEecCCCeEEEEEEccCC--CCeEEEeeCC-ccccC-----------------CCCceeec------ceEEEE
Q psy8771 109 IPPPALLEVMLDSPLNLSCVAVGSP--MPFVKWRKGQ-NIELT-----------------PDDKLPVG------RNVLTL 162 (904)
Q Consensus 109 ~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~-~~~~~-----------------~~~~~~~~------~~~l~i 162 (904)
..|.. ..+.+|+.++|.|.+.|.| .+.|.|+|+. +..+. ...|+.+. ...|.|
T Consensus 223 ~~~~~-~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 301 (438)
T 1qgc_4 223 VESGG-GLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQM 301 (438)
T ss_dssp EEECC-EEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEE
T ss_pred ecCCc-eEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEE
Confidence 34455 8899999999999999999 6799999852 11110 12344432 348999
Q ss_pred eee--cCCeEEEEEEEecCc-----ceEEEEEEEEEeecCCCCCCCCCCcceEEE----eecCCeEEEEEeCCCc-cceE
Q psy8771 163 DRV--TESENYTCIAASVLG-----VIETSTIVKVQCKYAPLLTLPVAPLDVKIS----EVTATSVRLDWTYPSE-TLLY 230 (904)
Q Consensus 163 ~~l--~d~g~Y~c~a~n~~g-----~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~----~~~~~sv~l~W~~~~~-~~~~ 230 (904)
.++ +|+|.|+|.|.|..+ .....+.|.|.. ..+.+|.-.... ......++|.+...+. +..
T Consensus 302 ~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~------~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~- 374 (438)
T 1qgc_4 302 SSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSA------AKTTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEP- 374 (438)
T ss_dssp CSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECS------SCCBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSC-
T ss_pred CCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEec------CCCCCCeEEEcCcccccccCCcEEEEEEeccccCCC-
Confidence 999 699999999999544 223445666651 111122111110 1123455555554322 111
Q ss_pred EEEEEEeCCCCCCeEE----eecc---eeceEEEcCCCCCCeEEEEEEEEcCCCC
Q psy8771 231 YVIQYKPKAANTPYSE----ISGI---ITTYYTVRNLSPYTEYEFYIIAVNNLGR 278 (904)
Q Consensus 231 y~v~~~~~~~~~~~~~----~~~~---~~~~~~i~~L~p~~~Y~~~v~a~n~~g~ 278 (904)
..|.|...+....... .... ....+.|.+....+ +.|+|.|.|..|.
T Consensus 375 ~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g~ 428 (438)
T 1qgc_4 375 VTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASS 428 (438)
T ss_dssp CEEEEGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGGT
T ss_pred cEEEEecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCCC
Confidence 1344443322111000 0111 12357888777667 9999999998874
No 456
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.97 E-value=6.1e-09 Score=99.32 Aligned_cols=88 Identities=25% Similarity=0.380 Sum_probs=74.1
Q ss_pred CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT 796 (904)
Q Consensus 718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~ 796 (904)
.+|.++.+...+.+++.|+|++|. +.+.+|.|.|...+.... .....+. ..++++|.+|+|++.|.|+|+|.+
T Consensus 105 ~~P~~l~v~~~t~~si~l~W~~p~-----~~i~~Y~v~y~~~~~~~~-~~~~~v~~~~t~~~l~gL~p~t~Y~~~V~A~~ 178 (195)
T 2qbw_A 105 SVPTNLEVVAATPTSLLISWDASY-----YGVSYYRITYGETGGNSP-VQEFTVPYSSSTATISGLKPGVDYTITVYAYS 178 (195)
T ss_dssp CSSCCCEEEEEETTEEEEECCCCC-----SSCSEEEEEEEETTCCSC-CEEEEEETTCSEEEECSCCTTCEEEEEEEEES
T ss_pred CCCcccEEEeCCCCEEEEEEeCCC-----CCccEEEEEEEECCCCCc-ceEEEeCCCCCEEEeCCCCCCCEEEEEEEEEe
Confidence 357899999999999999999883 568999999988764332 2334455 789999999999999999999999
Q ss_pred CCCCCCCCCcEEeec
Q psy8771 797 SIGDGPSSYPITIRT 811 (904)
Q Consensus 797 ~~g~g~~s~~~~~~t 811 (904)
..|.|+.|.++.+++
T Consensus 179 ~~G~g~~S~~v~~~~ 193 (195)
T 2qbw_A 179 DYYGSHHYSPISINY 193 (195)
T ss_dssp STTSSCBCCCEEEEE
T ss_pred CCccCCCCCCEEEEe
Confidence 999999999988765
No 457
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.97 E-value=6.9e-09 Score=97.38 Aligned_cols=144 Identities=14% Similarity=0.131 Sum_probs=92.8
Q ss_pred eEEecCCCeEEEEEEc--cCCCCeEEEee--CCcccc----------CCCCceee-cceEEEEeee--cCCeEEEEEEEe
Q psy8771 115 LEVMLDSPLNLSCVAV--GSPMPFVKWRK--GQNIEL----------TPDDKLPV-GRNVLTLDRV--TESENYTCIAAS 177 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~--g~p~p~i~W~k--~~~~~~----------~~~~~~~~-~~~~l~i~~l--~d~g~Y~c~a~n 177 (904)
+.+..|++++|.|... +.+.+.|.|+| + +..+ ....|+.+ .+++|.|.++ +|+|.|+|.|.|
T Consensus 9 v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~-~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~n 87 (182)
T 1hnf_A 9 TWGALGQDINLDIPSFQMSDDIDDIKWEKTSD-KKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYD 87 (182)
T ss_dssp EEEETTSCEEECCTTCCCCSSEEEEEEEEGGG-CCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEEEEEE
T ss_pred EEEecCCCEEEeCCcccccCcCCEEEEEECCC-CcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEEEEEe
Confidence 8889999999999553 35678999999 7 5444 23455554 6789999999 699999999999
Q ss_pred cCcceE--EEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceE
Q psy8771 178 VLGVIE--TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYY 255 (904)
Q Consensus 178 ~~g~~~--~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~ 255 (904)
..|... ....|.|. ..+..|. +.. ....++|.+...+.+... +.|...+ ... ......+
T Consensus 88 ~~g~~~~~~~~~L~V~-------~~~~~P~-i~~---~~~~v~L~C~~~~~p~~~--~~W~~~g--~~l----~~~~~~i 148 (182)
T 1hnf_A 88 TKGKNVLEKIFDLKIQ-------ERVSKPK-ISW---TCINTTLTCEVMNGTDPE--LNLYQDG--KHL----KLSQRVI 148 (182)
T ss_dssp TTSCEEEEEEEEEEEE-------CCCCCCE-EEE---ETTTTEEEEECSSCSSCE--EEEEESS--CEE----EEESSCE
T ss_pred CCCceeEEEEEEEEEc-------CcCCCCE-EEE---ccCcEEEEeEccCCCCCE--EEEEECC--EEC----CCCCcEE
Confidence 988754 45567776 3333342 222 122466666655433333 3343332 111 1112233
Q ss_pred EEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 256 TVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 256 ~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
.+.. ...+.+.|+|.|.|..|..
T Consensus 149 ~~~~-~~~d~G~Y~C~a~N~~~~~ 171 (182)
T 1hnf_A 149 THKW-TTSLSAKFKCTAGNKVSKE 171 (182)
T ss_dssp EEEC-CSCEEEEEEEEEECSSCEE
T ss_pred EEec-ccCCCcEEEEEEEeCCCCc
Confidence 3332 4678999999999998764
No 458
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=98.96 E-value=3.1e-09 Score=104.09 Aligned_cols=149 Identities=21% Similarity=0.351 Sum_probs=98.4
Q ss_pred CCCCcEEEeccCCceEEEEeCCCC--------------CCCcee----cccccccccceEEEEeeeccCCee--eeeeee
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPET--------------PNGQIT----HPPTRAARSHARLAAQSVLRRGRL--AHAVRQ 95 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~--------------~~g~i~----~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~~ 95 (904)
....|.|...+.+.+.|.|.+... .+|.+. .......+.....|...+. .|.. ....+.
T Consensus 25 ~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~~n~-~g~~~~~~~~l~ 103 (217)
T 2vr9_A 25 EPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVAKNR-VGQAVSRHASLQ 103 (217)
T ss_dssp SCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEEEET-TEEEECCCEEEE
T ss_pred CcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEEecC-CCccccccceEE
Confidence 566677776677788999976411 122211 1112333444444444432 3322 133344
Q ss_pred ccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEeeCCccccC--------CCCcee-ecceEEEEeee
Q psy8771 96 VADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELT--------PDDKLP-VGRNVLTLDRV 165 (904)
Q Consensus 96 v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~--------~~~~~~-~~~~~l~i~~l 165 (904)
+. ..+|.+...+.. ..+..|+.+.|.|.+ .|.|.|.|.|+|+ +..+. ...++. ..++.|.|.++
T Consensus 104 v~----~~~~~~~~~~~~-~~~~~g~~v~l~C~~~~g~p~~~v~W~~~-g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~ 177 (217)
T 2vr9_A 104 IA----VLRDDFRVEPKD-TRVAKGETALLECGPPKGIPEPTLIWIKD-GVPLDDLKAMSFGASSRVRIVDGGNLLISNV 177 (217)
T ss_dssp EC----EECCSCSBCCCC-EEECTTSCEEECCBCCCEESCCEEEEEET-TEEECCCCCC---CCCSEEEETTTEEEESSC
T ss_pred EE----EeCCCcEECCCc-cEEcCCCeEEEEEECCCCCCCCeEEEEEC-CcCCCcccccccccCCcEEecCCCcEEEeeC
Confidence 32 234556666666 889999999999999 8999999999999 66665 233333 35678999999
Q ss_pred --cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771 166 --TESENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 166 --~d~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
+|+|.|+|.|.|..|....+..+.+.
T Consensus 178 ~~~d~G~Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 178 EPIDEGNYKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp CSTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CHHHCeEEEEEEEcccceeccccEEEEE
Confidence 69999999999999998877666655
No 459
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=98.96 E-value=5.7e-09 Score=114.93 Aligned_cols=84 Identities=14% Similarity=0.251 Sum_probs=59.0
Q ss_pred CCCeE-EcCCCCceE-EecCCCeEEEEEEccCC----CCeEEEeeCCccccCCCCc---ee------ecceEEEEeee--
Q psy8771 103 VPPQF-SIPPPALLE-VMLDSPLNLSCVAVGSP----MPFVKWRKGQNIELTPDDK---LP------VGRNVLTLDRV-- 165 (904)
Q Consensus 103 ~~P~~-~~~~~~~~~-~~~g~~~~l~C~~~g~p----~p~i~W~k~~~~~~~~~~~---~~------~~~~~l~i~~l-- 165 (904)
.+|.+ ..+|.. .. +.+|++++|.|.+.|.| .+.|+|+|+ +..+..... .. ...+.|.|.++
T Consensus 237 ~~p~v~~~~p~~-~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~ 314 (444)
T 1igt_B 237 GGPSVFIFPPKI-KDVLMISLSPIVTCVVVDVSEDDPDVQISWFVN-NVEVHTAQTQTHREDYNSTLRVVSALPIQHQDW 314 (444)
T ss_dssp CCCEEEEECCCH-HHHHCTTSCCEEEEEEEEECTTCCCCEEEEEET-TEECSSTTCBCCEEECSSSEEEEEEEECCHHHH
T ss_pred CCceEEecCCch-hheeecCCCcEEEEEEeecccCCCCeEEEEEEC-CccccCcccccceeCCCCcEEEEEEEEEcHHHh
Confidence 46776 555543 33 58999999999999984 369999999 555533211 11 12357999988
Q ss_pred cCCeEEEEEEEecCcceEEEEEE
Q psy8771 166 TESENYTCIAASVLGVIETSTIV 188 (904)
Q Consensus 166 ~d~g~Y~c~a~n~~g~~~~~~~l 188 (904)
+|+|.|+|.|.|..|.......+
T Consensus 315 ~d~G~Y~C~a~n~~~~~~~~~~v 337 (444)
T 1igt_B 315 MSGKEFKCKVNNKDLPAPIERTI 337 (444)
T ss_dssp HTTCEEEEEEECTTCSSCEEEEE
T ss_pred ccCCcEEEEEEcCCCCCceEEEE
Confidence 69999999999998876333333
No 460
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=98.96 E-value=6.9e-09 Score=100.07 Aligned_cols=142 Identities=11% Similarity=0.108 Sum_probs=91.3
Q ss_pred CCCCcEEEeccCCce-EEEEeCCCC----CCCceecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcC
Q psy8771 36 APRDVQVRPLSSSTM-VIQWDEPET----PNGQITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIP 110 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~-~v~W~~~~~----~~g~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~ 110 (904)
....|.|...+.+.. .+.|.+... ..+.+........|...+.|...+ ......+.+.+ ..+|.+...
T Consensus 23 ~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~~~L~i~~v~~~D~G~Y~C~a~n--~~~s~~~~l~V-----~~~p~~~~~ 95 (204)
T 3sgj_C 23 DSVTLKCQGAYSPEDQSTQWFHNESLISSQASSYFIDAATVDDSGEYRCQTQL--STLSDPVQLEV-----HIGWLLLQA 95 (204)
T ss_dssp CCEEEEEECCSSSSCCCEEEEETTEEESCCSSEEEESSCCGGGCEEEEEEETT--SBCCCCEEEEE-----ECSSEEEEC
T ss_pred CCEEEEEcCCCCCCCcEEEEEECCEEcccCccEEEEecccccCCEEEEEEeCC--CcccccEEEEE-----ecCceEecC
Confidence 444455555454444 399987521 123444444455555555555433 22222334444 345566665
Q ss_pred CCCceEEecCCCeEEEEEEccC-CCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe-cCcceEEEE
Q psy8771 111 PPALLEVMLDSPLNLSCVAVGS-PMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS-VLGVIETST 186 (904)
Q Consensus 111 ~~~~~~~~~g~~~~l~C~~~g~-p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n-~~g~~~~~~ 186 (904)
+. ..+.+|+.++|.|.+.+. |.+.|.|+|+ +..+ ......+.|.|.++ +|+|.|+|.|.| ..+..+..+
T Consensus 96 ~~--~~v~~G~~v~L~C~~~~~~p~~~v~W~k~-g~~~----~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~ 168 (204)
T 3sgj_C 96 PR--WVFKEEDPIHLRCHSWKNTALHKVTYLQN-GKGR----KYFHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETV 168 (204)
T ss_dssp SC--SEEETTCCEEEEEEEGGGCCCEEEEEEET-TEEE----EEEEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCE
T ss_pred Cc--eeEeCCCcEEEEEEecCCCCCceEEEEEC-CcEe----ecccCCceEEECcCCcccCEEEEEEEEeCCCceecCcE
Confidence 55 678899999999999765 6689999999 5543 12235678999999 699999999999 445566677
Q ss_pred EEEEE
Q psy8771 187 IVKVQ 191 (904)
Q Consensus 187 ~l~v~ 191 (904)
.|.|.
T Consensus 169 ~l~V~ 173 (204)
T 3sgj_C 169 QITIT 173 (204)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88887
No 461
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=98.96 E-value=3.3e-09 Score=88.14 Aligned_cols=91 Identities=20% Similarity=0.199 Sum_probs=71.4
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG 699 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G 699 (904)
.|.+|.+|++..++.++++|+|..+...++.+..|+|+|..... ........+.++|.||+|++.|.|.|+|+....
T Consensus 7 ~Ps~v~~l~v~~~t~~Sv~LsW~~p~~~~~~i~~Y~v~~~~~~~---~~~~~~~~t~~~i~gL~PgT~Y~~~V~A~~~~~ 83 (104)
T 2dle_A 7 GAIQVFDVTAVNISATSLTLIWKVSDNESSSNYTYKIHVAGETD---SSNLNVSEPRAVIPGLRSSTFYNITVCPVLGDI 83 (104)
T ss_dssp SCCBEEEEEEEEECSSCEEEEEEESCSTTCCSCEEEEEEECSSC---EEEEEESSSEEECCSCCSSCEEEEEEEEESSSC
T ss_pred CCCCCceEEEEEeecCEEEEEEcCCCCCCCceEEEEEEEECCCC---eEEEcCCCCEEEECCCCCCCEEEEEEEEEECCc
Confidence 56789999999999999999999876666777899999986532 223344567999999999999999999997655
Q ss_pred CCCCCCCeeEEecCC
Q psy8771 700 EGATTPPIPVRTKQY 714 (904)
Q Consensus 700 ~~~~s~~~~~~t~~~ 714 (904)
++.+ ..+.+.|.+.
T Consensus 84 ~~~p-~~~~~~T~p~ 97 (104)
T 2dle_A 84 EGTP-GFLQVHTPPV 97 (104)
T ss_dssp CCBC-EEEEEECCCC
T ss_pred ccCC-eeEEEEccCC
Confidence 5443 3566777654
No 462
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.96 E-value=1.2e-08 Score=100.48 Aligned_cols=156 Identities=13% Similarity=0.164 Sum_probs=88.1
Q ss_pred eEEecCCCeEEEEEEccCCCCe---EEEeeCCccccC---------------CCCcee-----------ecceEEEEeee
Q psy8771 115 LEVMLDSPLNLSCVAVGSPMPF---VKWRKGQNIELT---------------PDDKLP-----------VGRNVLTLDRV 165 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p~p~---i~W~k~~~~~~~---------------~~~~~~-----------~~~~~l~i~~l 165 (904)
+.+..|++++|.|.+.|.|.+. |+|+|+++..+. ...+.. ..+.+|.|.++
T Consensus 11 V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v 90 (225)
T 4fmk_A 11 VRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGL 90 (225)
T ss_dssp EEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSC
T ss_pred EEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccC
Confidence 8889999999999999988764 799997443210 011111 23568999999
Q ss_pred --cCCeEEEEEEEecCcceEEEE-EEEEEeecCCCCC-CCC----CC-c--ceE-EEeecCCeEEEEEeCCCccceEEEE
Q psy8771 166 --TESENYTCIAASVLGVIETST-IVKVQCKYAPLLT-LPV----AP-L--DVK-ISEVTATSVRLDWTYPSETLLYYVI 233 (904)
Q Consensus 166 --~d~g~Y~c~a~n~~g~~~~~~-~l~v~~~~~~~~~-~P~----~p-~--~l~-~~~~~~~sv~l~W~~~~~~~~~y~v 233 (904)
+|+|.|+|.|.|..|...... .+.+.. .+... .+. .. . .+. +.........+.|...+........
T Consensus 91 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~ 168 (225)
T 4fmk_A 91 RVEDEGNYTCEFATFPNGTRRGVTWLRVIA--QPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQ 168 (225)
T ss_dssp CGGGCEEEEEEEEEETTEEEEEEEEEEEEB--CCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEE
T ss_pred CHHHCcceEEEEEeCCCcceeeeeeeeeec--CCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcc
Confidence 699999999999877644433 333331 00000 000 00 0 000 1111222334444443222211111
Q ss_pred EEEeCCCCCCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 234 QYKPKAANTPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
.... .+..+ .....|.|..+...+.+.|+|.|.|..|..
T Consensus 169 ~~~~--~~~~~-----~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~ 207 (225)
T 4fmk_A 169 EPGI--QAGTV-----TIISRYSLVPVGRADGVKVTCRVEHESFEE 207 (225)
T ss_dssp EECS--STTCE-----EEEEEEEECCCGGGTTCEEEEEEECTTCSS
T ss_pred eEEe--cCCCE-----EEEEEEEEeeCCHHHCCEEEEEEEcCCCCe
Confidence 1110 11111 112468999999999999999999987754
No 463
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.96 E-value=1.9e-09 Score=94.33 Aligned_cols=81 Identities=19% Similarity=0.267 Sum_probs=65.7
Q ss_pred cCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCcccc-------CCCCceee-----cceEEEEeee--cCCeEEEEE
Q psy8771 109 IPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIEL-------TPDDKLPV-----GRNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 109 ~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~-------~~~~~~~~-----~~~~l~i~~l--~d~g~Y~c~ 174 (904)
..+.+ +.+.+|++++|.|.+.|.|.+.|.|+++++..+ ....|+.+ ...+|.|.++ +|+|.|+|.
T Consensus 6 ~~~~~-~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 84 (124)
T 3rbg_A 6 NHTET-ITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCL 84 (124)
T ss_dssp CSEEE-EEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCCcc-EEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEE
Confidence 33445 899999999999999999999999998744332 13445443 2478999999 699999999
Q ss_pred EEecCcceEEEEEEEEE
Q psy8771 175 AASVLGVIETSTIVKVQ 191 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~ 191 (904)
|.|. |.....+.|.|.
T Consensus 85 a~n~-g~~~~~~~l~V~ 100 (124)
T 3rbg_A 85 HYSD-SVSTKEVKVIVL 100 (124)
T ss_dssp EESS-SEEEEEEEEEEE
T ss_pred EEcC-CCCcEEEEEEEE
Confidence 9999 888899999988
No 464
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.96 E-value=4.3e-10 Score=93.29 Aligned_cols=83 Identities=22% Similarity=0.382 Sum_probs=66.5
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecC
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVL 179 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~ 179 (904)
..+|.|...|.+ ..+.+|+.++|.|.+.|.|.+.|.|+|+ +..+... .+..|.|.++ +|+|.|+|.|.|..
T Consensus 8 ~~~~~i~~~p~~-~~v~~G~~v~l~C~~~g~p~~~v~W~k~-~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a~n~~ 80 (96)
T 2ens_A 8 LEEVQLVVEPEG-GAVAPGGTVTLTCEVPAQPSPQIHWMKD-GVPLPLP-----PSPVLILPEIGPQDQGTYSCVATHSS 80 (96)
T ss_dssp CCSCCCEEESTT-SEECTTCEEEEECCCSSCSSCCCCCEES-SSBCSSC-----CCSEEEEESCCTTTCEEEECEECCSS
T ss_pred CCCCEEEECCCC-CEEcCCCeEEEEEEEccCCCCEEEEEEC-CEECcCC-----CCCEEEECCCCcccCEEEEEEEEeCC
Confidence 456778888877 8899999999999999999999999998 6555432 4568999999 69999999999977
Q ss_pred cceEEEEEEEEE
Q psy8771 180 GVIETSTIVKVQ 191 (904)
Q Consensus 180 g~~~~~~~l~v~ 191 (904)
|....+..+.+.
T Consensus 81 ~~~~~s~~~~v~ 92 (96)
T 2ens_A 81 HGPQESRAVSIS 92 (96)
T ss_dssp CCCEECCCEEEE
T ss_pred CCcEEEEEEEEE
Confidence 664444444433
No 465
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.95 E-value=8.9e-09 Score=102.61 Aligned_cols=84 Identities=17% Similarity=0.213 Sum_probs=61.2
Q ss_pred EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCc-cc---c---------CCCCceee----cceEEEEeee--cC
Q psy8771 107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQN-IE---L---------TPDDKLPV----GRNVLTLDRV--TE 167 (904)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~-~~---~---------~~~~~~~~----~~~~l~i~~l--~d 167 (904)
+...|.. +.+.+|++++|.|.+.|.|.+.|.|+|+.. .. + ....|+.. ...+|.|.++ +|
T Consensus 4 v~~~p~~-~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (242)
T 2znx_A 4 LTQSPAT-LSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (242)
T ss_dssp EEEECSE-EEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred EEEcCCe-EEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHH
Confidence 5555666 899999999999999999999999998521 11 1 01345543 2458999999 69
Q ss_pred CeEEEEEEEecCcc-eEEEEEEEEE
Q psy8771 168 SENYTCIAASVLGV-IETSTIVKVQ 191 (904)
Q Consensus 168 ~g~Y~c~a~n~~g~-~~~~~~l~v~ 191 (904)
+|.|.|.+.|..+. ......|.|.
T Consensus 83 ~G~Y~C~~~n~~~~~~~~~~~L~V~ 107 (242)
T 2znx_A 83 FGMYFCQQSNSXPYTFGGGTKLEIT 107 (242)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CEEEEEeEecCCceEECCCEEEEEc
Confidence 99999999997653 2234566766
No 466
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.95 E-value=5.7e-09 Score=104.91 Aligned_cols=167 Identities=14% Similarity=0.161 Sum_probs=97.5
Q ss_pred EcCCCCceEEecCCCeEEEEEEccCC--CCeEEEeeCC-cccc-----------------CCCCceeec------ceEEE
Q psy8771 108 SIPPPALLEVMLDSPLNLSCVAVGSP--MPFVKWRKGQ-NIEL-----------------TPDDKLPVG------RNVLT 161 (904)
Q Consensus 108 ~~~~~~~~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~-~~~~-----------------~~~~~~~~~------~~~l~ 161 (904)
+..|.. +.+.+|++++|.|.+.|.+ .+.|.|+|.. +..+ ....|+.+. ..+|.
T Consensus 5 ~~~p~~-~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 83 (253)
T 3uzq_A 5 LEQSGA-ELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLH 83 (253)
T ss_dssp EEECCC-EEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred EecCCC-eeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEE
Confidence 344556 8899999999999999965 6789999821 2111 011344431 33599
Q ss_pred Eeee--cCCeEEEEEEEecCcce-EEEEEEEEEee-----------cCCCCCCCCCCcceEEEeecCCeEEEEEeCCCcc
Q psy8771 162 LDRV--TESENYTCIAASVLGVI-ETSTIVKVQCK-----------YAPLLTLPVAPLDVKISEVTATSVRLDWTYPSET 227 (904)
Q Consensus 162 i~~l--~d~g~Y~c~a~n~~g~~-~~~~~l~v~~~-----------~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~ 227 (904)
|.++ +|+|.|.|.|.|..+.. .....|.|... ..+.......|..+.+ ....+++|.+...+.+
T Consensus 84 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v--~~G~~v~L~C~~~~~~ 161 (253)
T 3uzq_A 84 LSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAV--SLGQRATISCRASENV 161 (253)
T ss_dssp ECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEE--CTTSCEEEEEEESSCC
T ss_pred eCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEE--eCCCCEEEEEEecCcc
Confidence 9999 79999999999966553 34566666610 0000000011222222 2345666666654322
Q ss_pred ce--EEEEEEEeCCCC------------------CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771 228 LL--YYVIQYKPKAAN------------------TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277 (904)
Q Consensus 228 ~~--~y~v~~~~~~~~------------------~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g 277 (904)
.. .+.+.|.....+ ..+..........|+|.++++.+.+.|.|.|.|..+
T Consensus 162 ~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~ 231 (253)
T 3uzq_A 162 DRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVP 231 (253)
T ss_dssp EETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred ccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCC
Confidence 21 123444332111 112211222345799999999999999999998654
No 467
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.95 E-value=3.5e-09 Score=90.08 Aligned_cols=83 Identities=19% Similarity=0.360 Sum_probs=67.9
Q ss_pred CCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeec-c---eEEEEeee--cCCeEEEEE
Q psy8771 101 RRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVG-R---NVLTLDRV--TESENYTCI 174 (904)
Q Consensus 101 ~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~-~---~~l~i~~l--~d~g~Y~c~ 174 (904)
...||.|...+.+ +.+.+|+.++|.|.+.|. |.|.|+|+ +..+..+.++.+. + ..|.|.++ +|+|.|+|.
T Consensus 5 ~~~pp~~~~~~~~-~~v~~G~~v~l~C~~~~~--p~v~W~k~-~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 80 (108)
T 2dm7_A 5 SSGPARFTQDLKT-KEASEGATATLQCELSKV--APVEWKKG-PETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCM 80 (108)
T ss_dssp SCCCCCBCSCCBC-CEEETTSCEEEEEEBSSS--CCCEEESS-SSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEE
T ss_pred cCCCCeeeecCCc-EEEeCCCcEEEEEEeCCC--CeeEEEEC-CEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEE
Confidence 3578999988888 999999999999999886 67999999 7777666666542 2 25999999 699999999
Q ss_pred EEecCcceEEEEEEEEE
Q psy8771 175 AASVLGVIETSTIVKVQ 191 (904)
Q Consensus 175 a~n~~g~~~~~~~l~v~ 191 (904)
|. .....+.|.|.
T Consensus 81 a~----n~~~~~~l~V~ 93 (108)
T 2dm7_A 81 CG----QERTSATLTVR 93 (108)
T ss_dssp ET----TEEEEEECEEE
T ss_pred Ec----CCEEEEEEEEe
Confidence 94 45677888887
No 468
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=98.95 E-value=8.8e-09 Score=97.64 Aligned_cols=74 Identities=20% Similarity=0.317 Sum_probs=61.5
Q ss_pred eEEecCCCeEEEEEEccCCCC--eEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771 115 LEVMLDSPLNLSCVAVGSPMP--FVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV 190 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p~p--~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v 190 (904)
+.+..|++++|.|.+ |.|.| .|.|.+. ...+ ...+.......|.|.++ +|+|.|.|.|.|..|.....+.|.|
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~-~~~l-~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV 93 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGL-DTSL-GAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLV 93 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESS-TTTT-CCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeec-cccc-CcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEE
Confidence 799999999999999 99988 9999996 4334 21222345678999999 4999999999999988888889998
Q ss_pred E
Q psy8771 191 Q 191 (904)
Q Consensus 191 ~ 191 (904)
.
T Consensus 94 ~ 94 (210)
T 1gsm_A 94 Y 94 (210)
T ss_dssp E
T ss_pred E
Confidence 8
No 469
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=98.95 E-value=7e-09 Score=84.04 Aligned_cols=85 Identities=22% Similarity=0.395 Sum_probs=69.0
Q ss_pred CCCCCcceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC
Q psy8771 620 TYAKPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG 699 (904)
Q Consensus 620 ~~~~p~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G 699 (904)
.|.+|.+|.+...+.+++.|+|.++.. ++.+.+|+|++ . + . ........++.+.+|.|++.|.|+|+|+|..|
T Consensus 3 ~P~~P~~l~~~~~~~~sv~L~W~~~~~-~~~i~~Y~v~~--~-~-~--~~~~~~~~~~~~~~L~~~t~Y~~~V~A~n~~G 75 (88)
T 1k85_A 3 APTAPTNLASTAQTTSSITLSWTASTD-NVGVTGYDVYN--G-T-A--LATTVTGTTATISGLAADTSYTFTVKAKDAAG 75 (88)
T ss_dssp SCCCCEEEEEEEECSSCEEEEEECCSC-CSSEEEEEEEE--S-S-S--EEEEESSSEEEECCCCSSCEEEEEEEEEETTT
T ss_pred CcCCCCccEEEeccCCEEEEEECCCCC-CCCccEEEEEE--C-C-E--EEeecCCCEEEeCCCCCCCEEEEEEEEEeCCC
Confidence 577899999999999999999998865 34599999984 1 1 1 22233457899999999999999999999999
Q ss_pred C-CCCCCCeeEEe
Q psy8771 700 E-GATTPPIPVRT 711 (904)
Q Consensus 700 ~-~~~s~~~~~~t 711 (904)
. |..|..+.++|
T Consensus 76 ~~s~~S~~v~v~T 88 (88)
T 1k85_A 76 NVSAASNAVSVKT 88 (88)
T ss_dssp EECCCCCCEEEEC
T ss_pred CcCCCCCCEEEEC
Confidence 8 77888887765
No 470
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.95 E-value=5.2e-09 Score=102.89 Aligned_cols=155 Identities=14% Similarity=0.099 Sum_probs=92.2
Q ss_pred eEEecCCCeEEEEEEccCCC-----CeEEEeeCC--------ccccC------CCCceee-------cceEEEEeee--c
Q psy8771 115 LEVMLDSPLNLSCVAVGSPM-----PFVKWRKGQ--------NIELT------PDDKLPV-------GRNVLTLDRV--T 166 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p~-----p~i~W~k~~--------~~~~~------~~~~~~~-------~~~~l~i~~l--~ 166 (904)
+.+.+|+++.|.|.+.|.|. +.|.|+|++ +.... ...|... ++.+|.|.++ +
T Consensus 11 v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~ 90 (222)
T 3sbw_C 11 YVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQ 90 (222)
T ss_dssp EEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGG
T ss_pred EEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccc
Confidence 88999999999999998884 489999972 11110 1133332 2358999999 6
Q ss_pred CCeEEEEEEEecCcceEEEEEEEEEeecCCCCCCCCCCcceEE--EeecCCeEEEEEeCCCccceEEEEEEEeCCCCC--
Q psy8771 167 ESENYTCIAASVLGVIETSTIVKVQCKYAPLLTLPVAPLDVKI--SEVTATSVRLDWTYPSETLLYYVIQYKPKAANT-- 242 (904)
Q Consensus 167 d~g~Y~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~--~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~-- 242 (904)
|+|.|+|.|.| .|.....+.|.|. .+|..|. +.+ .......++|.+...+.+.. .|.|...++..
T Consensus 91 D~G~Y~C~~~~-~~~~~~~~~l~V~-------~~~~~~~-~~~~~~~~~g~~v~L~C~~~g~P~p--~i~W~~~~g~~~~ 159 (222)
T 3sbw_C 91 DAGVYRCMISY-GGADYKRITVKVN-------APYNKIN-QRILVVDPVTSEHELTCQAEGYPKA--EVIWTSSDHQVLS 159 (222)
T ss_dssp GCEEEEEEEES-SSEEEEEEEEEEE-------BCCCCCE-EEEEEEETTTTEEEEEEEEEEBSCC--EEEEEETTCCEEC
T ss_pred cCeEEEEEEEe-CCCceeEEEEEEE-------CCCCCCC-ceeeeeecCCCcEEEEEEecCCCCC--eEEEEECCCceec
Confidence 99999999999 6667777888887 3443332 222 22334567777765432222 35555432110
Q ss_pred CeEE--eecceeceEE---EcCCCCCCeEEEEEEEEcCCCCCC
Q psy8771 243 PYSE--ISGIITTYYT---VRNLSPYTEYEFYIIAVNNLGRGP 280 (904)
Q Consensus 243 ~~~~--~~~~~~~~~~---i~~L~p~~~Y~~~v~a~n~~g~s~ 280 (904)
.... ........+. +..+...+.+.|+|.|.|..|...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~ 202 (222)
T 3sbw_C 160 GKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDPEEN 202 (222)
T ss_dssp CEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTTTEE
T ss_pred CccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCcccee
Confidence 0000 1011111111 113345677899999999988643
No 471
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=98.94 E-value=3.4e-09 Score=107.45 Aligned_cols=214 Identities=13% Similarity=0.078 Sum_probs=121.4
Q ss_pred CCCCcEEEecc-CCc--eEEEEeCCCCC--------CCceecccc---cccccce--EEEEeeeccCCeeeeeeeeccCC
Q psy8771 36 APRDVQVRPLS-SST--MVIQWDEPETP--------NGQITHPPT---RAARSHA--RLAAQSVLRRGRLAHAVRQVADP 99 (904)
Q Consensus 36 ~p~~l~~~~~~-~~s--~~v~W~~~~~~--------~g~i~~~~~---~~~~~~~--~~~~~~~~~~g~~~~~~~~v~~~ 99 (904)
....|.|...+ .+. +.|.|.+.... ++.+..... ...+.+. ..|...+........+.+.+..
T Consensus 19 ~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~l~V~~- 97 (265)
T 2oz4_A 19 TQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYS- 97 (265)
T ss_dssp EEEEEEEEEESCSCGGGCEEEEEETTEECCCEEEECSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEEEEEEC-
T ss_pred CCEEEEEEccCCCCCcceEEEEEeCCEECCceEeeCCCeEEEEeecccccccCCcceEEEEEecCCCCcEEEEEEEEeC-
Confidence 45566666655 444 49999875321 222222212 2233333 3343333333333444555532
Q ss_pred CCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEe
Q psy8771 100 VRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAAS 177 (904)
Q Consensus 100 ~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n 177 (904)
..+|.+.. .+ ..+.+|+.++|.|.+. |.+.|+| + |..+.... ..+.|.|..+ +|+|.|+|.|.|
T Consensus 98 --~p~p~~~~--~~-~~v~~G~~v~l~C~~~--p~~~i~W--~-g~~~~~~~----~~~~l~i~~~~~~~~g~Y~C~a~n 163 (265)
T 2oz4_A 98 --FPAPNVIL--TK-PEVSEGTEVTVKCEAH--PRAKVTL--N-GVPAQPLG----PRAQLLLKATPEDNGRSFSCSATL 163 (265)
T ss_dssp --CCCCEEEE--SC-SEEETTCEEEEEEECC--TTSEEEE--S-SCSSSCCS----SEECCEEECCGGGTTEEEEEEEEE
T ss_pred --CCCceeec--CC-ceecCCCcEEEEEEcc--CCCEEEE--C-CEEccCCC----CcEEEEEccccccCCceEEEEEEc
Confidence 22356653 34 6788999999999999 9999999 5 55552211 3456778777 588899999985
Q ss_pred cC-cceE---EEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceec
Q psy8771 178 VL-GVIE---TSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITT 253 (904)
Q Consensus 178 ~~-g~~~---~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~ 253 (904)
.. |... ....|.|.. .|.......|.++.+.. ...++|.+...+.+.. .+.|...+. ......
T Consensus 164 ~~~g~~~~~s~~~~l~V~~--~p~~~~~~~p~~~~v~~--g~~~~l~C~~~g~P~p--~i~W~~~~~----~~~~~g--- 230 (265)
T 2oz4_A 164 EVAGQLIHKNQTRELRVLY--GPRLDERDCPGNWTWPE--NSQQTPMCQAWGNPLP--ELKCLKDGT----FPLPIG--- 230 (265)
T ss_dssp ECSSSEEEEEEEEEEEEEE--EEECCGGGSCSEEEEET--TCEECCCCCCEEESCC--EEEEEETTT----EECCTT---
T ss_pred CCCCCcccccccEEEEEEe--CCccccccCCCccEEcC--CCeEEEEeECccCCCC--eEEEEECCc----ccCCCC---
Confidence 44 7655 566677763 22222223344554433 4566666664433332 244544432 111111
Q ss_pred eEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 254 YYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 254 ~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
. +..+...+.+.|+|.|.|..|..
T Consensus 231 ~--~~~v~~~d~G~Y~C~a~N~~G~~ 254 (265)
T 2oz4_A 231 E--SVTVTRDLEGTYLCRARSTQGEV 254 (265)
T ss_dssp S--CEECCGGGCEEEEEEEEETTEEE
T ss_pred c--EEEeehhhCeEEEEEEECCCCcE
Confidence 1 12377789999999999988864
No 472
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.94 E-value=2.8e-09 Score=93.15 Aligned_cols=76 Identities=29% Similarity=0.321 Sum_probs=60.5
Q ss_pred eEEecCCCeEEEEEEccCC--CCeEEEeeCCccccC------CCCc-e-----eecceEEEEeee--cCCeEEEEEEEec
Q psy8771 115 LEVMLDSPLNLSCVAVGSP--MPFVKWRKGQNIELT------PDDK-L-----PVGRNVLTLDRV--TESENYTCIAASV 178 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~~~~~~------~~~~-~-----~~~~~~l~i~~l--~d~g~Y~c~a~n~ 178 (904)
+.+.+|+.+.|.|.+.|.| .+.|.|+++ +..+. .... . ....+.|.|.++ +|+|.|+|.|.|.
T Consensus 18 v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 96 (122)
T 3s35_X 18 IELSVGEKLVLNCTARTELNVGIDFNWEYP-SSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSG 96 (122)
T ss_dssp EEEEETCCEEEEEEEEECTTCCCEEEEECS-CTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEECS
T ss_pred EEEecCCeEEEEEEEEcCCCCcEEEEEECC-CcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEccC
Confidence 7899999999999999954 578999998 44321 1111 1 124568999999 6999999999999
Q ss_pred CcceEEEEEEEEE
Q psy8771 179 LGVIETSTIVKVQ 191 (904)
Q Consensus 179 ~g~~~~~~~l~v~ 191 (904)
.|...+.+.|.|.
T Consensus 97 ~g~~~~~~~l~V~ 109 (122)
T 3s35_X 97 LMTKKNSTFVRVH 109 (122)
T ss_dssp SCEEEEEEEEEEE
T ss_pred CCceEEEEEEEEe
Confidence 9999999999988
No 473
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=98.93 E-value=2.5e-09 Score=103.93 Aligned_cols=144 Identities=19% Similarity=0.227 Sum_probs=95.7
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC----------------------CCceecccccccccceEEEEeeeccCCee--ee
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP----------------------NGQITHPPTRAARSHARLAAQSVLRRGRL--AH 91 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~----------------------~g~i~~~~~~~~~~~~~~~~~~~~~~g~~--~~ 91 (904)
....|.|...+.+...|.|.+.... ++.+....+...|.....|...+...... ..
T Consensus 20 ~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~ 99 (209)
T 1nbq_A 20 NPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVK 99 (209)
T ss_dssp CCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEEEEEEEETTSSCEECCE
T ss_pred CCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcEEEEEEecCCCCccceEE
Confidence 5666777777778899999765322 12233333444455555565555432222 22
Q ss_pred eeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEeeCCccccCCCCc---------eee--cceE
Q psy8771 92 AVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKGQNIELTPDDK---------LPV--GRNV 159 (904)
Q Consensus 92 ~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~~~~~~~~~~~---------~~~--~~~~ 159 (904)
+.+.+ ..+|.+...+.. ..+..|+.+.|.|.+ .|.|.|.|.|+++ +..+....+ +.. ..+.
T Consensus 100 ~~l~V-----~~~p~~~~~~~~-~~~~~g~~~~l~C~~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (209)
T 1nbq_A 100 VKLIV-----LVPPSKPTVNIP-SSATIGNRAVLTCSEQDGSPPSEYTWFKD-GIVMPTNPKSTRAFSNSSYVLNPTTGE 172 (209)
T ss_dssp EECCE-----EBCCCCCCCCCB-SEEETTSCEEECCCCCSCBSCCEEEEEET-TCCCCSCSSSSSSCTTCCCCCCTTTCC
T ss_pred EEEEE-----ecCCcCCCcccc-cceecCCEEEEEEeCCCCCCCceeEEEEC-CeeCCCccccceeeeccceEEcCCcce
Confidence 33333 345655555555 678999999999997 8999999999999 655554322 222 5678
Q ss_pred EEEeee--cCCeEEEEEEEecCcceEEEE
Q psy8771 160 LTLDRV--TESENYTCIAASVLGVIETST 186 (904)
Q Consensus 160 l~i~~l--~d~g~Y~c~a~n~~g~~~~~~ 186 (904)
|.|.++ +|+|.|+|.|.|..|....+.
T Consensus 173 L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~ 201 (209)
T 1nbq_A 173 LVFDPLSASDTGEYSCEARNGYGTPMTSN 201 (209)
T ss_dssp EEESSCCGGGCCCEEEEEECSSSCCEECC
T ss_pred EEEEeccccCCeEEEEEEeCCcCcccccc
Confidence 999998 699999999999999874443
No 474
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.93 E-value=1.1e-08 Score=104.17 Aligned_cols=170 Identities=15% Similarity=0.159 Sum_probs=99.0
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCcc----cc---------CCCCceee----cceEEEEeee-
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNI----EL---------TPDDKLPV----GRNVLTLDRV- 165 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~----~~---------~~~~~~~~----~~~~l~i~~l- 165 (904)
.+.|...|.. +.+.+|++++|.|.+.|.|.+.|.|+|++.. .+ ....|+.. +..+|.|.++
T Consensus 12 ~~~v~~~p~~-~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 90 (276)
T 3auv_A 12 DIQMTQSPSS-LSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQ 90 (276)
T ss_dssp CCCEEEECSE-EECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred ceeEEeCCCe-EEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCC
Confidence 3456666766 8999999999999999999999999985321 11 11345543 2348999999
Q ss_pred -cCCeEEEEEEEecCcc-eEEEEEEEEEeecCCC---C---CCC----CCCcceEEEeecCCeEEEEEeCCCccceEEEE
Q psy8771 166 -TESENYTCIAASVLGV-IETSTIVKVQCKYAPL---L---TLP----VAPLDVKISEVTATSVRLDWTYPSETLLYYVI 233 (904)
Q Consensus 166 -~d~g~Y~c~a~n~~g~-~~~~~~l~v~~~~~~~---~---~~P----~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v 233 (904)
+|+|.|.|.|.|..+. ....+.|.|....... . ..| ..|.++.+ ....+++|.+...+.+.....|
T Consensus 91 ~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v--~~G~~v~L~C~~~g~~~~~~~v 168 (276)
T 3auv_A 91 PEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLV--QPGGSLRLSCAASGFTISDYWI 168 (276)
T ss_dssp GGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEE--CTTCCEEEEEEEESSCGGGSEE
T ss_pred hhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEe--cCCCeEEEEEEecCccCCCCEE
Confidence 6999999999997654 2334567766210000 0 000 01112222 2234555555543221111123
Q ss_pred EEEeCCC-----------------------CCCeEEee--cceeceEEEcCCCCCCeEEEEEEEEcCC
Q psy8771 234 QYKPKAA-----------------------NTPYSEIS--GIITTYYTVRNLSPYTEYEFYIIAVNNL 276 (904)
Q Consensus 234 ~~~~~~~-----------------------~~~~~~~~--~~~~~~~~i~~L~p~~~Y~~~v~a~n~~ 276 (904)
.|..... ...+.... ......+.|.+++..+.+.|.|.|.|..
T Consensus 169 ~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~ 236 (276)
T 3auv_A 169 HWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVFF 236 (276)
T ss_dssp EEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECSS
T ss_pred EEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcCc
Confidence 3322211 11222111 1223479999999999999999999974
No 475
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.93 E-value=2.6e-09 Score=99.49 Aligned_cols=142 Identities=11% Similarity=0.131 Sum_probs=89.5
Q ss_pred eEEecCCCeEEEEEEccCCCCeEEEeeCCccccC-----------CCCceee--cceEEEEeee--cCCeEEEEEEEecC
Q psy8771 115 LEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELT-----------PDDKLPV--GRNVLTLDRV--TESENYTCIAASVL 179 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~-----------~~~~~~~--~~~~l~i~~l--~d~g~Y~c~a~n~~ 179 (904)
+.+.+|++++|.|.+.+ |.+.|.|+|++..... ...|+.. .+++|.|.++ +|+|.|+|.|.|..
T Consensus 5 v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~ 83 (171)
T 1ccz_A 5 IYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNIT 83 (171)
T ss_dssp EEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTCC
T ss_pred EEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCCC
Confidence 78899999999999855 8899999998432110 1234444 5689999999 69999999999988
Q ss_pred cceEEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeEEeecceeceEEEcC
Q psy8771 180 GVIETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYSEISGIITTYYTVRN 259 (904)
Q Consensus 180 g~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~ 259 (904)
| .....|.|. .++..|. +... ... ..|.+...+.+... +.|...+ .... ......+.+.+
T Consensus 84 ~--~~~~~L~V~-------~~~~~p~-i~~~-~~~--~~L~C~~~~~p~p~--i~W~~~~--~~l~---~~~~~~l~~~~ 143 (171)
T 1ccz_A 84 D--TMKFFLYVL-------EMVSKPM-IYWE-CSN--ATLTCEVLEGTDVE--LKLYQGK--EHLR---SLRQKTMSYQW 143 (171)
T ss_dssp S--CEEEEEEEE-------CCCCCCE-EEEE-TTT--TEEEEECSSCSSCE--EEEEETT--EEEE---EESSSEEEEEC
T ss_pred C--cEEEEEEEE-------CcCCCCE-EEEe-cCC--cEEEEEeCCCCCcE--EEEEECC--EECc---CCcceEEEEec
Confidence 8 677788887 4444442 2111 111 25566554333332 3343321 1111 11123344443
Q ss_pred CCCCCeEEEEEEEEcCCCCC
Q psy8771 260 LSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 260 L~p~~~Y~~~v~a~n~~g~s 279 (904)
.++.+.|+|.|.|..|..
T Consensus 144 --~~~~g~Y~C~a~N~~~~~ 161 (171)
T 1ccz_A 144 --TNLRAPFKCKAVNRVSQE 161 (171)
T ss_dssp --SCCSSCEEEEEEETTEEE
T ss_pred --cCCCceEEEEEEcccCcc
Confidence 667789999999998753
No 476
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.93 E-value=5.6e-09 Score=97.92 Aligned_cols=111 Identities=14% Similarity=0.085 Sum_probs=72.5
Q ss_pred CCceecccccccccceEEEEeeeccCCe--eeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEE
Q psy8771 61 NGQITHPPTRAARSHARLAAQSVLRRGR--LAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVK 138 (904)
Q Consensus 61 ~g~i~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~ 138 (904)
+|.++...+...|...+.|...+..... ...+.+.|... ...|.+ ...+..++|.|.+.|.|.|.|+
T Consensus 60 ~gsL~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~--~~~p~i---------~~~~~~v~L~C~~~g~p~p~i~ 128 (176)
T 1hng_A 60 NGDLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEM--VSKPMI---------YWECSNATLTCEVLEGTDVELK 128 (176)
T ss_dssp TSCEEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECC--CCCCEE---------EEETTTTEEEEECSSCSSCEEE
T ss_pred CCcEEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCC--CCCCEE---------EecCCcEEEEEEecCCCCcEEE
Confidence 4555555556666666666666554443 33445554421 122332 2345679999999999999999
Q ss_pred EeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCcceEEEEEEEE
Q psy8771 139 WRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLGVIETSTIVKV 190 (904)
Q Consensus 139 W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v 190 (904)
|+|+ +..+....+ +.|.++ +|+|.|+|.|.|..|...+.+.|.+
T Consensus 129 W~~~-g~~l~~~~~-------~~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~~ 174 (176)
T 1hng_A 129 LYQG-KEHLRSLRQ-------KTMSYQWTNLRAPFKCKAVNRVSQESEMEVVNC 174 (176)
T ss_dssp EEET-TEEEEEESS-------SEEEEECSCCSSCEEEEEEETTEEEEEEECCCC
T ss_pred EEEC-CEECCCCCc-------EEEEEEEccCCeEEEEEEEecCCCceecccccC
Confidence 9999 655543222 344455 7999999999999998887765543
No 477
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=98.92 E-value=4.4e-08 Score=93.64 Aligned_cols=178 Identities=12% Similarity=0.131 Sum_probs=112.4
Q ss_pred cceEEEeeccceEEEeccCCCCCCCceeeEEEEEEeCCcc--cc---c-eE-EecccceEEEeC--CCCCcEEEEEEEEE
Q psy8771 625 RDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAK--AK---H-HR-RIGLVETYSLTG--LYPNTLYYIWLAAQ 695 (904)
Q Consensus 625 ~~l~~~~~~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~--~~---~-~~-~~~~~~~~~l~~--L~p~t~Y~v~V~a~ 695 (904)
.+|.-.......++.+|.+.. ......|.+.|+..... .. . .. ..+....+.+.. +.....|.|.|.+
T Consensus 3 ~nl~C~~~~~~~~~C~W~~~~--~~~~~~y~l~y~~~~~~~~~~~~C~~y~~~~~~~~~C~~~~~~~~~~~~~~i~v~~- 79 (199)
T 2b5i_C 3 PEVQCFVFNVEYMNCTWQSSS--EPQPTNLTLHYWYKNSDNDKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQD- 79 (199)
T ss_dssp CCCEEEEETTTEEEEECCCCS--SSSCCCCEEEEEETTSSSCCCEECSSEEEETTEEEEEEEEGGGCCTTSCEEEEEEC-
T ss_pred CcCEEEECCCcEEEEEecCCC--cCCCceEEEEEEECCCCCCccccCCCccccCCceeEEEECCcccccceEEEEEEEe-
Confidence 455555567789999999864 12246788888754321 11 1 01 112234555544 4455688888863
Q ss_pred cCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEecCcc
Q psy8771 696 SPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLKNQT 775 (904)
Q Consensus 696 ~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~~~~ 775 (904)
..|.. .+....+.....+.+.||.+|++.....+.+.|+|+.|.. .. ...|+|+|+...+..+ ....+...+
T Consensus 80 -~~g~~-~s~~~~~~~~~iVkP~pP~~l~~~~~~~~~l~l~W~~p~~---~~-~l~yev~y~~~~~~~w--~~~~~~~~~ 151 (199)
T 2b5i_C 80 -PREPR-RQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFL---NH-CLEHLVQYRTDWDHSW--TEQSVDYRH 151 (199)
T ss_dssp -SSCTT-CEEEEEECGGGSEECCCCEEEEEEEEETTEEEEEEECSSC---ST-TCEEEEEEEETTCSSC--EEEEECSSC
T ss_pred -CCcce-ecceEEEchHHceecCCCcEEEEEECCCCCEEEEECCCCC---CC-ceEEEEEEeecCCccc--EEEeccCce
Confidence 33321 2223344444444344789999988777899999999842 22 3489999998765444 333333678
Q ss_pred eEEecCCCCCceEEEEEEEeeCCC------CCCCCCcEEeecCC
Q psy8771 776 SFVLDELKKWTEYRIWVLAGTSIG------DGPSSYPITIRTHE 813 (904)
Q Consensus 776 ~~~i~~L~p~t~Y~~~V~a~~~~g------~g~~s~~~~~~t~~ 813 (904)
.+.|.+|.|++.|.|+|||....| .|++|.++.+.|..
T Consensus 152 ~~~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~~ 195 (199)
T 2b5i_C 152 KFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSNT 195 (199)
T ss_dssp EEEECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC----
T ss_pred EEEecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCCc
Confidence 999999999999999999998542 46778788777643
No 478
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=5.4e-10 Score=94.24 Aligned_cols=88 Identities=22% Similarity=0.327 Sum_probs=72.8
Q ss_pred CCCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeE-EeecceeceEEEcCCCCCCeEEEEEEEEcCC
Q psy8771 198 LTLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYS-EISGIITTYYTVRNLSPYTEYEFYIIAVNNL 276 (904)
Q Consensus 198 ~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~ 276 (904)
.+.|.+|.+|++...+.+++.|+|+++.+.+.+|.|.|+.......+. .......+.++|.+|+|++.|.|+|+|.|..
T Consensus 5 ~~~p~~P~~l~v~~~t~~si~lsW~~p~g~i~~Y~v~y~~~~~~~~~~~~~v~~~~~~~~l~~L~p~t~Y~~~V~A~~~~ 84 (105)
T 2ekj_A 5 SSGRSPPSNLALASETPDSLQVSWTPPLGRVLHYWLTYAPASGLGPEKSVSVPGARSHVTLPDLQAATKYRVLVSAIYAA 84 (105)
T ss_dssp CTTCCCCEEEEEEEEETTEEEEEEECCSSCCSBBCBBCCCTTSCSCCCCBCCBTTSSEEEECSCCSSCCCBCBBCBBCSS
T ss_pred ccCCCCCCceEEEeCCCCEEEEEEeCCCCcceEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCC
Confidence 478999999999999999999999999888999999998754332221 2233456899999999999999999999999
Q ss_pred CCCCCCCCe
Q psy8771 277 GRGPPSSPA 285 (904)
Q Consensus 277 g~s~~s~~~ 285 (904)
|.+.++...
T Consensus 85 g~g~~s~~~ 93 (105)
T 2ekj_A 85 GRSEAVSAT 93 (105)
T ss_dssp CBCCCBCCB
T ss_pred ccCCccccE
Confidence 998876543
No 479
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.92 E-value=1.1e-08 Score=100.09 Aligned_cols=155 Identities=12% Similarity=0.161 Sum_probs=88.3
Q ss_pred eEEecCCCeEEEEEEccCCCCe---EEEeeCCccccCC------------------CCceee-------cceEEEEeee-
Q psy8771 115 LEVMLDSPLNLSCVAVGSPMPF---VKWRKGQNIELTP------------------DDKLPV-------GRNVLTLDRV- 165 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p~p~---i~W~k~~~~~~~~------------------~~~~~~-------~~~~l~i~~l- 165 (904)
+++.+|++++|.|.+.|.|.+. |+|+|+ +..+.. ..|+.. .+.+|.|.++
T Consensus 9 vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~ 87 (218)
T 4frw_A 9 VTVVLGQDAKLPCFYRGDSGEQVGQVAWARV-DAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAV 87 (218)
T ss_dssp EEEETTSCEEECCEECCCTTCEEEEEEEEEE-CSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCC
T ss_pred EEEEcCCCEEEEEEEEcCCCCCccEEEEEEC-CCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeecc
Confidence 8999999999999999998764 899997 322211 112221 2457999999
Q ss_pred -cCCeEEEEEEEecCcceEEE-EEEEEEeecCCCCCCCCCCc--ceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCC
Q psy8771 166 -TESENYTCIAASVLGVIETS-TIVKVQCKYAPLLTLPVAPL--DVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAAN 241 (904)
Q Consensus 166 -~d~g~Y~c~a~n~~g~~~~~-~~l~v~~~~~~~~~~P~~p~--~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~ 241 (904)
+|+|.|.|.+.+..+..... ..+.+. ..+.... ...........+.+.+...+.+.. .|.|...+..
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p--~i~W~~~~~~ 158 (218)
T 4frw_A 88 QADEGEYECRVSTFPAGSFQARLRLRVL-------VPPLPSLNPGPALEEGQGLTLAASCTAEGSPAP--SVTWDTEVKG 158 (218)
T ss_dssp GGGCEEEEEEEEEETTEEEEEEEEEEEE-------BCCCCEEEECSCEETTCCSEEEEEEEEEEBSCC--EEEEEESSCC
T ss_pred HHHCCceeEEEEeccCceeeeEEEEEEe-------eeccceeeeeeeeeeeeccccceeeeccCCcCc--eEEEEECCcc
Confidence 69999999999877664433 333333 1111000 000111112233333332211111 2333332211
Q ss_pred CCeEE-e----ecceeceEEEcCCCCCCeEEEEEEEEcCCCCC
Q psy8771 242 TPYSE-I----SGIITTYYTVRNLSPYTEYEFYIIAVNNLGRG 279 (904)
Q Consensus 242 ~~~~~-~----~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g~s 279 (904)
..... . .......|.|..+...+.+.|+|.|.|..|..
T Consensus 159 ~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~ 201 (218)
T 4frw_A 159 TTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQ 201 (218)
T ss_dssp EEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTCSS
T ss_pred cccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCe
Confidence 11000 0 01123569999999999999999999998764
No 480
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=98.92 E-value=2.5e-09 Score=92.25 Aligned_cols=84 Identities=24% Similarity=0.370 Sum_probs=68.0
Q ss_pred CCCCCCcceEEEeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeE-EeecceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771 199 TLPVAPLDVKISEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYS-EISGIITTYYTVRNLSPYTEYEFYIIAVNNLG 277 (904)
Q Consensus 199 ~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g 277 (904)
++|.+|.+|++...+.+++.|+|.++...+.+|.|.|...++..... .......+.++|.+|+|++.|.|+|.|.|..|
T Consensus 27 tp~~~P~~l~v~~~t~~Si~lsW~~p~~~i~~Y~V~y~~~~~~~~~~~~~v~~~~t~~~l~gL~P~t~Y~~~V~A~~~~G 106 (121)
T 2ocf_D 27 SVSDVPTKLEVVAATPTSLLISWDAPAVTVRYYRITYGETGGNSPVQEFTVPGSKSTATISGLKPGVDYTITVYAVTGLR 106 (121)
T ss_dssp --CCSCEEEEEEEECSSCEEEEEECCSSCCCEEEEEEEETTTCSCBEEEEEETTCCEEEECCCCTTCEEEEEEEEECCHH
T ss_pred CCCCCCCccEEEecCCCEEEEEEcCCCCCCcEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEeCCC
Confidence 57789999999999999999999999778999999999865433222 22234568999999999999999999999999
Q ss_pred CCCCC
Q psy8771 278 RGPPS 282 (904)
Q Consensus 278 ~s~~s 282 (904)
.+.++
T Consensus 107 ~g~~S 111 (121)
T 2ocf_D 107 LMLAG 111 (121)
T ss_dssp HHHHS
T ss_pred ccCCC
Confidence 86543
No 481
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.92 E-value=1.1e-08 Score=102.40 Aligned_cols=165 Identities=14% Similarity=0.221 Sum_probs=95.8
Q ss_pred EEcCCCCceEEecCCCeEEEEEEccCC-----CCeEEEeeCC-ccc---cC---------CCCceee----cceEEEEee
Q psy8771 107 FSIPPPALLEVMLDSPLNLSCVAVGSP-----MPFVKWRKGQ-NIE---LT---------PDDKLPV----GRNVLTLDR 164 (904)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p-----~p~i~W~k~~-~~~---~~---------~~~~~~~----~~~~l~i~~ 164 (904)
+...|.. +.+.+|++++|.|.+.|.| .+.|.|+|+. +.. +. ...|+.. +..+|.|.+
T Consensus 4 v~~~p~~-~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 82 (247)
T 1svz_A 4 MTQTPLY-LPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISR 82 (247)
T ss_dssp EEEECSE-EEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESS
T ss_pred EEecCCe-EEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECC
Confidence 4555666 8999999999999999998 6899999842 111 10 1345543 234899999
Q ss_pred e--cCCeEEEEEEEecCcc-eEEEEEEEEEeecC----------CCCCCCCCCcceEEEeecCCeEEEEEeCCCccceEE
Q psy8771 165 V--TESENYTCIAASVLGV-IETSTIVKVQCKYA----------PLLTLPVAPLDVKISEVTATSVRLDWTYPSETLLYY 231 (904)
Q Consensus 165 l--~d~g~Y~c~a~n~~g~-~~~~~~l~v~~~~~----------~~~~~P~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y 231 (904)
+ +|+|.|.|.+.|..+. ....+.|.|..... +.... ..+.... .....+++|.+...+.+....
T Consensus 83 v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~-~~~~~~~--v~~G~~v~L~C~~~~~~~~~~ 159 (247)
T 1svz_A 83 VEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQL-QQSGPEL--KKPGETVKISCKATNYAFTDY 159 (247)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEE-EECCCEE--ECTTCCEEEEEEEESSCGGGS
T ss_pred CCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEE-eCCCcee--ecCCCcEEEEEEEcCcccCCc
Confidence 9 6999999999997654 22345677762110 00000 0011111 223345666665442211111
Q ss_pred EEEEEeCCC-----------------------CCCeEEee--cceeceEEEcCCCCCCeEEEEEEEEcC
Q psy8771 232 VIQYKPKAA-----------------------NTPYSEIS--GIITTYYTVRNLSPYTEYEFYIIAVNN 275 (904)
Q Consensus 232 ~v~~~~~~~-----------------------~~~~~~~~--~~~~~~~~i~~L~p~~~Y~~~v~a~n~ 275 (904)
.+.|..... ...+.... ......|.|.+++..+.+.|.|.|.|.
T Consensus 160 ~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 160 SMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp CEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred EEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 122222110 11111111 122358999999999999999999985
No 482
>2b5i_C Cytokine receptor common gamma chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3bpl_C* 3qb7_C* 3qaz_C*
Probab=98.92 E-value=2.9e-08 Score=94.97 Aligned_cols=177 Identities=14% Similarity=0.186 Sum_probs=113.5
Q ss_pred CeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEE-----eecCceEEEEcC--CCCCCeEEEEEEEE
Q psy8771 487 DVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQ-----VVDNNQLTTISD--LTPHTIYTIRVQAF 559 (904)
Q Consensus 487 ~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~--L~p~t~Y~~~V~a~ 559 (904)
+|.....+...+..+|++... .....|.+.|....... ..+..- ..+....+.+.. +.....|.|.|++
T Consensus 4 nl~C~~~~~~~~~C~W~~~~~--~~~~~y~l~y~~~~~~~-~~~~~C~~y~~~~~~~~~C~~~~~~~~~~~~~~i~v~~- 79 (199)
T 2b5i_C 4 EVQCFVFNVEYMNCTWQSSSE--PQPTNLTLHYWYKNSDN-DKVQKCSHYLFSEEITSGCQLQKKEIHLYQTFVVQLQD- 79 (199)
T ss_dssp CCEEEEETTTEEEEECCCCSS--SSCCCCEEEEEETTSSS-CCCEECSSEEEETTEEEEEEEEGGGCCTTSCEEEEEEC-
T ss_pred cCEEEECCCcEEEEEecCCCc--CCCceEEEEEEECCCCC-CccccCCCccccCCceeEEEECCcccccceEEEEEEEe-
Confidence 577777777899999998541 22367888877543110 111111 112233455544 4445678888863
Q ss_pred eCCCCCCCCCcEEEecCCC-CCCCCCCceEEecCCCeEEEEEeCCCCCCCCceEEEEEeccCCCCCcceEEEeeccceEE
Q psy8771 560 TSVGPGPLSAPVLVKTQQG-VPSQPRDLRAVDIQETAVTLAWSKPTHSGENIISYELYWNDTYAKPRDLRAVDIQETAVT 638 (904)
Q Consensus 560 ~~~g~~~~S~~~~~~t~~~-~p~~p~~~~~~~~~~~~~~l~W~~~~~~~~~~~~y~v~~~~~~~~p~~l~~~~~~~~~~~ 638 (904)
..|. ..+....+..... .|.||.+|.+.......+.|+|..|..
T Consensus 80 -~~g~-~~s~~~~~~~~~iVkP~pP~~l~~~~~~~~~l~l~W~~p~~--------------------------------- 124 (199)
T 2b5i_C 80 -PREP-RRQATQMLKLQNLVIPWAPENLTLHKLSESQLELNWNNRFL--------------------------------- 124 (199)
T ss_dssp -SSCT-TCEEEEEECGGGSEECCCCEEEEEEEEETTEEEEEEECSSC---------------------------------
T ss_pred -CCcc-eecceEEEchHHceecCCCcEEEEEECCCCCEEEEECCCCC---------------------------------
Confidence 3332 1233344443332 478899999988777899999998841
Q ss_pred EeccCCCCCCCceeeEEEEEEeCCccccceEEecccceEEEeCCCCCcEEEEEEEEEcCCC------CCCCCCCeeEEec
Q psy8771 639 LAWSKPTHSGENIISYELYWNDTYAKAKHHRRIGLVETYSLTGLYPNTLYYIWLAAQSPRG------EGATTPPIPVRTK 712 (904)
Q Consensus 639 l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G------~~~~s~~~~~~t~ 712 (904)
.....|.|+|+..++..+........+.+.|.+|.|++.|.|+|+|....| -|++|.++.+.|.
T Consensus 125 ----------~~~l~yev~y~~~~~~~w~~~~~~~~~~~~l~~l~p~~~Y~vqVR~~~~~~~~~~g~WSeWS~~~~~~t~ 194 (199)
T 2b5i_C 125 ----------NHCLEHLVQYRTDWDHSWTEQSVDYRHKFSLPSVDGQKRYTFRVRSRFNPLCGSAQHWSEWSHPIHWGSN 194 (199)
T ss_dssp ----------STTCEEEEEEEETTCSSCEEEEECSSCEEEECSCCTTSCEEEEEEEECCSSSCCCCCCCCCCCCEEC---
T ss_pred ----------CCceEEEEEEeecCCcccEEEeccCceEEEecCCCCCcEEEEEEEEeccCCcCcCCeECCCCCCEEecCC
Confidence 134589999998766666555555567899999999999999999998542 2566766666654
No 483
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.91 E-value=3e-08 Score=98.92 Aligned_cols=172 Identities=10% Similarity=0.119 Sum_probs=106.8
Q ss_pred CCCCeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCC---ce--eecceEEEEeee--cCCeEEEEE
Q psy8771 102 RVPPQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDD---KL--PVGRNVLTLDRV--TESENYTCI 174 (904)
Q Consensus 102 ~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~---~~--~~~~~~l~i~~l--~d~g~Y~c~ 174 (904)
..+|.|...|. ..+.+|++++|.|.+.+ +.+.+.|+|+ +..+.... +. ...++.|.|.++ +|+|.|+|.
T Consensus 5 ~~kP~i~~~P~--~~V~~G~~VtL~C~~~~-~~~~~~W~k~-g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 80 (257)
T 1b6u_A 5 HRKPSLLAHPG--PLVKSEETVILQCWSDV-RFQHFLLHRE-GKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCY 80 (257)
T ss_dssp CCCCEECCBSC--SEEESSCCEEEEEEESS-CCSEEEEEEE-STTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEE
T ss_pred CCCCEEEEcCC--CEecCCCCEEEEEecCC-CCcEEEEEEC-CCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEe
Confidence 45678877775 67889999999999985 4678999998 54332110 11 124678999999 699999999
Q ss_pred EEecCc-----ceEEEEEEEEEeecCCCCCCCCCCcceEE----EeecCCeEEEEEeCCCccceEEEEEEEeCCCCCCeE
Q psy8771 175 AASVLG-----VIETSTIVKVQCKYAPLLTLPVAPLDVKI----SEVTATSVRLDWTYPSETLLYYVIQYKPKAANTPYS 245 (904)
Q Consensus 175 a~n~~g-----~~~~~~~l~v~~~~~~~~~~P~~p~~l~~----~~~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~~~~~ 245 (904)
+.|..+ ..+..+.|.|. ..+.+|. +.+ .......++|.+.....+ ..| .|..++......
T Consensus 81 a~~~~~~~~~s~~S~~~~L~V~-------~~~~~P~-l~~~p~~~V~~G~~vtL~C~~~~~~-~~~--~w~k~g~~~~~~ 149 (257)
T 1b6u_A 81 GSVTHSPYQLSAPSDPLDIVIT-------GLYEKPS-LSAQPGPTVLAGESVTLSCSSRSSY-DMY--HLSREGEAHERR 149 (257)
T ss_dssp EECSSCTTSCCCCCCCEEEEEE-------CSSCCCE-EECSSCTTCBTTCEEEEEEECSSCC-SEE--EEEETTSSCEEC
T ss_pred EeccCCCccccccCCCEEEecc-------cCCCCcc-eEccCCCccCCCCEEEEEEeCCCCC-cEE--EEEECCcccCcc
Confidence 987532 23455677777 2222221 111 113446788888876443 333 344433221100
Q ss_pred ----E-eecceeceEEEcCCCCCCeEEEEEEEEcCCC---CCCCCCCeEEecC
Q psy8771 246 ----E-ISGIITTYYTVRNLSPYTEYEFYIIAVNNLG---RGPPSSPAVITTG 290 (904)
Q Consensus 246 ----~-~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~g---~s~~s~~~~~~t~ 290 (904)
. ..+.....|.|.++. +.+.|+|.|.+... .+.++.++.+...
T Consensus 150 ~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~ 200 (257)
T 1b6u_A 150 FSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVT 200 (257)
T ss_dssp CBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCB
T ss_pred cccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEe
Confidence 0 111234679999998 89999999997643 2445666655443
No 484
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=98.91 E-value=6.7e-09 Score=88.08 Aligned_cols=89 Identities=22% Similarity=0.338 Sum_probs=70.6
Q ss_pred CCCCCCCCeEEEecC--CceEEEEecCCCC---CCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEE
Q psy8771 480 EPGTAPRDVQVRPLS--SSTMVIQWDEPET---PNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTI 554 (904)
Q Consensus 480 ~p~~~p~~l~v~~~~--~~~~~l~W~~p~~---~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~ 554 (904)
+.+.+|.++.+.... .+++.|+|++|.. .++.+..|.|+|+..+.. .|........+++.|.+|.||+.|.|
T Consensus 6 vkp~pP~~l~v~~~~~~~~~l~lsW~~P~~w~~~~~~~l~Y~v~y~~~~~~---~w~~~~~~~~~~~~l~~L~p~t~Y~~ 82 (109)
T 1uc6_A 6 VKPDPPENVVARPVPSNPRRLEVTWQTPSTWPDPESFPLKFFLRYRPLILD---QWQHVELSNGTAHTITDAYAGKEYII 82 (109)
T ss_dssp CCCCCCEEEEEEECTTCTTCEEEEEECCTTCCCTTTTTBCEEEEEEESSSC---CCCCEEESSCSEEEETTCCSSSCEEE
T ss_pred EecCCCcceEEEEcCCCCCEEEEEECCCCCccCCCcEEEEEEEEEEECCCC---CcEEEecccCCEEEEeCCCCCCEEEE
Confidence 446899999988764 5899999999864 456789999999988643 45555556678899999999999999
Q ss_pred EEEEEeCCCCCCCCCcEE
Q psy8771 555 RVQAFTSVGPGPLSAPVL 572 (904)
Q Consensus 555 ~V~a~~~~g~~~~S~~~~ 572 (904)
+|+|.+. |.|.+|+...
T Consensus 83 ~VRa~~~-g~g~wS~WS~ 99 (109)
T 1uc6_A 83 QVAAKDN-EIGTWSDWSV 99 (109)
T ss_dssp EEECCBS-SSCCCCCCCE
T ss_pred EEEEEeC-CCCCcCcCCC
Confidence 9999985 7776666543
No 485
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.91 E-value=3.1e-08 Score=99.12 Aligned_cols=158 Identities=15% Similarity=0.168 Sum_probs=93.5
Q ss_pred eEEecCCCeEEEEEEccCC--CCeEEEeeCC-cccc-----------------CCCCceeec------ceEEEEeee--c
Q psy8771 115 LEVMLDSPLNLSCVAVGSP--MPFVKWRKGQ-NIEL-----------------TPDDKLPVG------RNVLTLDRV--T 166 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~p--~p~i~W~k~~-~~~~-----------------~~~~~~~~~------~~~l~i~~l--~ 166 (904)
+.+.+|++++|.|.+.|.| .+.|.|+|+. +..+ ....|+.+. ..+|.|.++ +
T Consensus 12 ~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 91 (247)
T 2ghw_B 12 GVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE 91 (247)
T ss_dssp EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHH
Confidence 8899999999999999998 6889999842 1110 112455432 357999999 6
Q ss_pred CCeEEEEEEEecCcc--eEEEEEEEEEeecCC--------CCCCC---CCCcceEEEeecCCeEEEEEeCCCccceEEEE
Q psy8771 167 ESENYTCIAASVLGV--IETSTIVKVQCKYAP--------LLTLP---VAPLDVKISEVTATSVRLDWTYPSETLLYYVI 233 (904)
Q Consensus 167 d~g~Y~c~a~n~~g~--~~~~~~l~v~~~~~~--------~~~~P---~~p~~l~~~~~~~~sv~l~W~~~~~~~~~y~v 233 (904)
|+|.|.|.|.|..+. ....+.|.|...... ....+ .+|..+.+ ....+++|.+...+.+.. .|
T Consensus 92 D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~G~~v~L~C~~~~~~~~--~v 167 (247)
T 2ghw_B 92 DTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSL--SPGERATLSCRASQSVRS--NL 167 (247)
T ss_dssp GCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEE--CTTSCEEEEEEESSCCTT--CE
T ss_pred HCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEe--cCCCcEEEEEEeCCCccc--eE
Confidence 999999999997433 223456666611000 00000 01222222 234566666665432222 23
Q ss_pred EEEe--CCCC----------------CCeEEeecceeceEEEcCCCCCCeEEEEEEEEcCC
Q psy8771 234 QYKP--KAAN----------------TPYSEISGIITTYYTVRNLSPYTEYEFYIIAVNNL 276 (904)
Q Consensus 234 ~~~~--~~~~----------------~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~n~~ 276 (904)
.|.. .+.. ..+..........|+|.+++..+.+.|.|.|.|..
T Consensus 168 ~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~ 228 (247)
T 2ghw_B 168 AWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNW 228 (247)
T ss_dssp EEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSS
T ss_pred EEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCC
Confidence 3332 1111 11111112334579999999999999999999853
No 486
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.90 E-value=3e-08 Score=94.48 Aligned_cols=90 Identities=22% Similarity=0.357 Sum_probs=73.7
Q ss_pred CCCCCCeEEEecCCceEEEEecCCCCCCCceeeEEEEEEeCCCCCCcceEEEeecCceEEEEcCCCCCCeEEEEEEEEeC
Q psy8771 482 GTAPRDVQVRPLSSSTMVIQWDEPETPNGQITGYKVYYTQDQSLPMSAWETQVVDNNQLTTISDLTPHTIYTIRVQAFTS 561 (904)
Q Consensus 482 ~~~p~~l~v~~~~~~~~~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~ 561 (904)
+.+|.++.+...+.+++.|+|++|. +.+.+|+|.|........ .-........+++++.+|.|++.|.|+|+|++.
T Consensus 104 ~~~P~~l~v~~~t~~si~l~W~~p~---~~i~~Y~v~y~~~~~~~~-~~~~~v~~~~t~~~l~gL~p~t~Y~~~V~A~~~ 179 (195)
T 2qbw_A 104 SSVPTNLEVVAATPTSLLISWDASY---YGVSYYRITYGETGGNSP-VQEFTVPYSSSTATISGLKPGVDYTITVYAYSD 179 (195)
T ss_dssp CCSSCCCEEEEEETTEEEEECCCCC---SSCSEEEEEEEETTCCSC-CEEEEEETTCSEEEECSCCTTCEEEEEEEEESS
T ss_pred CCCCcccEEEeCCCCEEEEEEeCCC---CCccEEEEEEEECCCCCc-ceEEEeCCCCCEEEeCCCCCCCEEEEEEEEEeC
Confidence 4577899999999999999999975 568999999988654321 112333466789999999999999999999999
Q ss_pred CCCCCCCCcEEEec
Q psy8771 562 VGPGPLSAPVLVKT 575 (904)
Q Consensus 562 ~g~~~~S~~~~~~t 575 (904)
.|.|+.|..+.+++
T Consensus 180 ~G~g~~S~~v~~~~ 193 (195)
T 2qbw_A 180 YYGSHHYSPISINY 193 (195)
T ss_dssp TTSSCBCCCEEEEE
T ss_pred CccCCCCCCEEEEe
Confidence 99999998887765
No 487
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.90 E-value=3.9e-09 Score=102.70 Aligned_cols=161 Identities=15% Similarity=0.167 Sum_probs=95.3
Q ss_pred EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------------CCCCceee----cceEEEEeee--cC
Q psy8771 107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDRV--TE 167 (904)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~l--~d 167 (904)
+.. |.. +.+.+|++++|.|.+.|.|.+.|.|+|+. +..+ ....|+.. +..+|.|.++ +|
T Consensus 4 v~q-p~~-~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 81 (210)
T 1lk3_L 4 LTQ-PPA-LTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADD 81 (210)
T ss_dssp EEC-CSE-EEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred EEC-CCc-EEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHH
Confidence 444 555 89999999999999999999999999842 2111 11245543 2348999999 69
Q ss_pred CeEEEEEEEecCcceE-EEEEEEEEeecCCCCCCCCCCcceEEEe-----ecCCeEEEEEeCCCccceEEEEEEEeCCCC
Q psy8771 168 SENYTCIAASVLGVIE-TSTIVKVQCKYAPLLTLPVAPLDVKISE-----VTATSVRLDWTYPSETLLYYVIQYKPKAAN 241 (904)
Q Consensus 168 ~g~Y~c~a~n~~g~~~-~~~~l~v~~~~~~~~~~P~~p~~l~~~~-----~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~ 241 (904)
+|.|.|.|.|..+... ....|.|. ..+.+|. +.+.. .....++|.+...+.......|.|...+..
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~~l~V~-------~~~~~P~-v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~ 153 (210)
T 1lk3_L 82 TAIYFCQQSWNGPLTFGAGTKLELK-------RADAAPT-VSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTE 153 (210)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC-------CCCBCCE-EEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred CeEEEEEEEcCCCceeCCCEEEEEc-------CCCcCCe-EEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCcc
Confidence 9999999999877533 23466665 2222221 11111 123355555554311111112444433211
Q ss_pred C--C-eEE---eecc-----eeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771 242 T--P-YSE---ISGI-----ITTYYTVRNLSPYTEYEFYIIAVNNLG 277 (904)
Q Consensus 242 ~--~-~~~---~~~~-----~~~~~~i~~L~p~~~Y~~~v~a~n~~g 277 (904)
. . ... .... ....+.|..+...+.+.|+|.|.|...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 200 (210)
T 1lk3_L 154 RRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTS 200 (210)
T ss_dssp CCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred CCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCC
Confidence 0 1 000 0001 123688888888889999999999754
No 488
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.90 E-value=2e-08 Score=98.70 Aligned_cols=123 Identities=20% Similarity=0.282 Sum_probs=80.5
Q ss_pred eecccccccccceEEEEeeeccCCeeeeeeeeccCCCCCCCCeEEcCCCCceEEecCCCeEEEEEE-ccCCCCeEEEeeC
Q psy8771 64 ITHPPTRAARSHARLAAQSVLRRGRLAHAVRQVADPVRRVPPQFSIPPPALLEVMLDSPLNLSCVA-VGSPMPFVKWRKG 142 (904)
Q Consensus 64 i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~~~~~~~~P~~~~~~~~~~~~~~g~~~~l~C~~-~g~p~p~i~W~k~ 142 (904)
+....+...|.....|...+.. .....+.+.|.. ...+|.+...+. ..+.+|+.++|.|.+ .|.|.|.|.|+++
T Consensus 74 L~I~~v~~~D~G~Y~C~~~~~~-~~~~~~~l~V~~--~~~~p~i~~~~~--~~v~~G~~~~l~C~~~~g~P~~~v~W~~~ 148 (222)
T 4i0k_A 74 LRLQRVRVTDEGSYTCFVSIQD-FDSAAVSLQVAA--PYSKPSMTLEPN--KDLRPGNMVTITCSSYQGYPEAEVFWKDG 148 (222)
T ss_dssp EEECSCCGGGCSCEEEEEEECC-CCCCCCCCCCCB--CCCCCEEECCC-------CCSEEEEEEEEEEEBSCCEEEEECT
T ss_pred EEECCcccccCEEEEEEEEeCC-CceEEEEEEEEc--CCCCCcEEeCCC--ceecCCceEEEEEecccccCCCeEEEEcC
Confidence 4444455555555666555432 222333343332 234577776664 567789999999999 8999999999996
Q ss_pred CccccCCCCcee---ecce---EEEEeee--cCCeEEEEEEEecCcceEEEEEEEEE
Q psy8771 143 QNIELTPDDKLP---VGRN---VLTLDRV--TESENYTCIAASVLGVIETSTIVKVQ 191 (904)
Q Consensus 143 ~~~~~~~~~~~~---~~~~---~l~i~~l--~d~g~Y~c~a~n~~g~~~~~~~l~v~ 191 (904)
++..+....... ..++ .|.|.++ +|+|.|+|.|.|..|.....+.|.|.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~ 205 (222)
T 4i0k_A 149 QGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTIT 205 (222)
T ss_dssp TSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECC
T ss_pred CCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEe
Confidence 466655433222 1233 3778888 69999999999999999999999887
No 489
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.90 E-value=3.4e-09 Score=103.43 Aligned_cols=162 Identities=14% Similarity=0.136 Sum_probs=96.3
Q ss_pred EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCc-ccc------------CCCCceee----cceEEEEeee--cC
Q psy8771 107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQN-IEL------------TPDDKLPV----GRNVLTLDRV--TE 167 (904)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~-~~~------------~~~~~~~~----~~~~l~i~~l--~d 167 (904)
+...|.. +.+.+|+++.|.|.+.|.|.+.|.|+|+.. ..+ ....|+.. ...+|.|.++ +|
T Consensus 4 v~~~p~~-~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3d9a_L 4 LTQSPAT-LSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (213)
T ss_dssp EEEECSE-EEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred EEeCCcc-EEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhh
Confidence 4444555 899999999999999999999999998522 211 11245543 2348999999 69
Q ss_pred CeEEEEEEEecCcceE-EEEEEEEEeecCCCCCCCCCCcceEEEe-----ecCCeEEEEEeCCCccceEEEEEEEeCCCC
Q psy8771 168 SENYTCIAASVLGVIE-TSTIVKVQCKYAPLLTLPVAPLDVKISE-----VTATSVRLDWTYPSETLLYYVIQYKPKAAN 241 (904)
Q Consensus 168 ~g~Y~c~a~n~~g~~~-~~~~l~v~~~~~~~~~~P~~p~~l~~~~-----~~~~sv~l~W~~~~~~~~~y~v~~~~~~~~ 241 (904)
+|.|+|.|.|..|... ..+.|.|. ..+.+|. +.+.. .....++|.+...+.......+.|...+..
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~-------~~~~~p~-v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~ 154 (213)
T 3d9a_L 83 FGMYFCQQSNSWPYTFGGGTKLEIK-------RADAAPT-VSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSE 154 (213)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC-------CCCBCCE-EEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEE
T ss_pred CEEEEEeeecCCcceeCCCEEEEEe-------cCCCCce-eEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCc
Confidence 9999999999877533 23467776 2222222 11111 122355555554311111112334332211
Q ss_pred --CC-eEE---eec-----ceeceEEEcCCCCCCeEEEEEEEEcCCC
Q psy8771 242 --TP-YSE---ISG-----IITTYYTVRNLSPYTEYEFYIIAVNNLG 277 (904)
Q Consensus 242 --~~-~~~---~~~-----~~~~~~~i~~L~p~~~Y~~~v~a~n~~g 277 (904)
.. ... ... .....+.|.++...+.+.|+|.|.|...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 201 (213)
T 3d9a_L 155 RQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 201 (213)
T ss_dssp ECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTC
T ss_pred CcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccC
Confidence 00 000 000 0124789999999899999999999754
No 490
>2b5i_B Interleukin-2 receptor beta chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 3qaz_B* 2erj_B*
Probab=98.89 E-value=7.2e-09 Score=99.81 Aligned_cols=100 Identities=23% Similarity=0.324 Sum_probs=74.3
Q ss_pred CCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEEEEEEEccCCCCccEEEEec-CcceEEecCCCCCceEEEEEEEee
Q psy8771 718 APPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYKLQFVETGRSDSEASIVTLK-NQTSFVLDELKKWTEYRIWVLAGT 796 (904)
Q Consensus 718 ~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~v~~~~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~a~~ 796 (904)
.||.+|++...+.+.+.|+|+.|......+.+..|+|.|+..+..........+. ..+++.|.+|.||+.|.|+|||..
T Consensus 107 ~pP~~l~~~~~~~~~l~lsW~~p~~~~~~~~~l~Yevry~~~~~~w~~~~~~~~~~~~~~~~l~~L~p~t~Y~vqVRa~~ 186 (214)
T 2b5i_B 107 MAPISLQVVHVETHRCNISWEISQASHYFERHLEFEARTLSPGHTWEEAPLLTLKQKQEWICLETLTPDTQYEFQVRVKP 186 (214)
T ss_dssp CCCEEEEEEEECSSCEEEEEECCSCCGGGTTCEEEEEEEECTTSCSTTSCCEEECSCCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCceEEEEEecCCeEEEEECCCCccccCCCceEEEEEEecCCCChheeeeeeecccceEEEeccCCCCCEEEEEEEEee
Confidence 4789999988777899999999953222334789999999875422222223333 678999999999999999999998
Q ss_pred CCCC----CCCCCcEEeecCCCCCC
Q psy8771 797 SIGD----GPSSYPITIRTHEDDPS 817 (904)
Q Consensus 797 ~~g~----g~~s~~~~~~t~~~~P~ 817 (904)
..|. |++|.++.+.|.+..|+
T Consensus 187 ~~~~~G~WS~WS~~~~~~T~~~~~~ 211 (214)
T 2b5i_B 187 LQGEFTTWSPWSQPLAFRTKPAALG 211 (214)
T ss_dssp SCCSSCCCCCCCCCEEEECCC----
T ss_pred CCCCCCCccCCCCCEEEEcCCCCcc
Confidence 7553 78999999999887764
No 491
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.89 E-value=1.9e-08 Score=101.29 Aligned_cols=77 Identities=14% Similarity=0.231 Sum_probs=56.0
Q ss_pred eEEecCCCeEEEEEEccC--CCCeEEEeeCC-cccc------------CCCCceee----cceEEEEeee--cCCeEEEE
Q psy8771 115 LEVMLDSPLNLSCVAVGS--PMPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDRV--TESENYTC 173 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~g~--p~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~l--~d~g~Y~c 173 (904)
+.+.+|++++|.|.+.|. |.+.|.|+|.. +..+ ....|+.. ...+|.|.++ +|+|.|.|
T Consensus 12 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C 91 (256)
T 3ux9_B 12 VSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYYC 91 (256)
T ss_dssp EEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred EEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEEEE
Confidence 889999999999999998 78899999842 1111 01235443 2347999999 79999999
Q ss_pred EEEecCcc---eEEEEEEEEE
Q psy8771 174 IAASVLGV---IETSTIVKVQ 191 (904)
Q Consensus 174 ~a~n~~g~---~~~~~~l~v~ 191 (904)
.+.|..+. ....+.|.|.
T Consensus 92 ~~~~~~~~~~~~~~~~~l~V~ 112 (256)
T 3ux9_B 92 QVRDNNENEWVFGGGTKLTVL 112 (256)
T ss_dssp EEEETTTTEEEECCCEEEEEC
T ss_pred EEEECCCCceEECCCEEEEEE
Confidence 99997653 2244567766
No 492
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=98.88 E-value=8.6e-09 Score=97.65 Aligned_cols=138 Identities=11% Similarity=0.047 Sum_probs=90.2
Q ss_pred CCCCcEEEeccCCceEEEEeCCCCC----CCceecccccccccceEEEEeeeccC-Ce-eeeeeeeccCCCCCCCCeEEc
Q psy8771 36 APRDVQVRPLSSSTMVIQWDEPETP----NGQITHPPTRAARSHARLAAQSVLRR-GR-LAHAVRQVADPVRRVPPQFSI 109 (904)
Q Consensus 36 ~p~~l~~~~~~~~s~~v~W~~~~~~----~g~i~~~~~~~~~~~~~~~~~~~~~~-g~-~~~~~~~v~~~~~~~~P~~~~ 109 (904)
....|.|..-+ +...+.|.+.... ++.+........|...+.|...+... .. ...+.+.+.. ...+|.|..
T Consensus 23 ~~v~L~C~~~~-~~~~~~W~k~g~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~--~~~~p~i~~ 99 (184)
T 2gi7_A 23 KPVTLRCQGPP-GVDLYRLEKLSSSRYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATG--VFAKPSLSA 99 (184)
T ss_dssp CCEEEEEECST-TCSEEEEEETTTCCEESSSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEES--SSCCCEEEE
T ss_pred CcEEEEEeCCC-CCCEEEEEECCccccCcccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecC--cCCCCEEEe
Confidence 44455555444 5678899776432 34455555555565555565544321 11 1233444432 245677877
Q ss_pred CCCCceEEecCCCeEEEEEEccCCCCeEEEeeCCccccCCCCceeecceEEEEeee--cCCeEEEEEEEecCc
Q psy8771 110 PPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQNIELTPDDKLPVGRNVLTLDRV--TESENYTCIAASVLG 180 (904)
Q Consensus 110 ~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~l~i~~l--~d~g~Y~c~a~n~~g 180 (904)
.| + ..+.+|+.++|.|.+.+.| +.+.|+|+ +..+....+.....+.|.|.++ +|+|.|+|.|.|..+
T Consensus 100 ~p-~-~~v~~G~~v~l~C~~~~~~-~~~~w~k~-g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 100 QP-G-PAVSSGGDVTLQCQTRYGF-DQFALYKE-GDPAPYKNPERWYRASFPIITVTAAHSGTYRCYSFSSRD 168 (184)
T ss_dssp EC-C-CSSCCTTCEEEEEECSSCC-CEEEEEEC-CCCTTSCCCCEEEEESSSEEEETTCCSEEEEEEEECTTS
T ss_pred CC-C-ceecCCCcEEEEEEcCCCC-cEEEEEEC-CCcCcceecCCCceEEEEEccCCccCCeEEEEEEEeCCC
Confidence 66 3 6778999999999988776 68999999 6555543344446778999999 699999999999765
No 493
>3up1_A Interleukin-7 receptor subunit alpha; cytokine receptor, fibronectin type 3 fold, membrane and SOL glycosylation, immune system; HET: NAG FUC NGA; 2.15A {Homo sapiens} PDB: 3di3_B* 3di2_B*
Probab=98.87 E-value=9.8e-08 Score=91.05 Aligned_cols=172 Identities=13% Similarity=0.101 Sum_probs=115.4
Q ss_pred ccceEEEeccCCCCCCCceeeEEEEEEeCCccccceE--EecccceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEE
Q psy8771 633 QETAVTLAWSKPTHSGENIISYELYWNDTYAKAKHHR--RIGLVETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVR 710 (904)
Q Consensus 633 ~~~~~~l~w~~~~~~~~~~~~y~v~~~~~~~~~~~~~--~~~~~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~ 710 (904)
...+++..|.+... ....|.+.+........... ...........+|.-...+.|.|.+ |. ..|....+.
T Consensus 35 ~~~~~tc~~~~~~~---~~~~~~~~~~~~~~~~~c~~~~~~~~~y~~~~~~~~l~~~~~i~V~l----G~-~~S~~~~f~ 106 (223)
T 3up1_A 35 SQHSLTCAFEDPDV---NTTNLEFEICGALVEVKCLNFRKLQEIYFIETKKFLLIGKSNICVKV----GE-KSLTCKKID 106 (223)
T ss_dssp TEEEEEEEESSTTC---CCTTEEEEEESSBBSCSEEECEEETTEEEEEESCBCCSSEEEEEEEE----TT-EEEEEEEEE
T ss_pred ceEEEEEecCCCCC---CCCceEEEEecccccccccccccccceEEeecCCEEEEeccEEEEEc----CC-ceeccEEEE
Confidence 45778889988643 44556666664433222111 1222335566788888888888883 32 224456666
Q ss_pred ecCCCCCCCCCCcEEEecC-CCEEEEEecCCCCCCCCc--cEEEEEEEEEEcc-CCCCccEEEEec-CcceEEecCCCCC
Q psy8771 711 TKQYVPGAPPQNVSCEPLS-STSIRISWEPPPVERSNG--HIVYYKLQFVETG-RSDSEASIVTLK-NQTSFVLDELKKW 785 (904)
Q Consensus 711 t~~~~p~~~P~~l~~~~~~-~~~v~l~W~~~~~~~~~g--~~~~Y~v~~~~~~-~~~~~~~~~~~~-~~~~~~i~~L~p~ 785 (904)
....+.+.||.+|.+.... .+.+.|+|.+|.. .++ ....|+|+|+... ...+ ....+. ....+.+.+|.|+
T Consensus 107 l~~iVKPdPP~nLtv~~~~~~~~l~LsW~~P~~--~~~~~~~L~YEVrYr~~~~~~~W--~~v~~~~t~~~i~l~~L~Pg 182 (223)
T 3up1_A 107 LTTIVKPEAPFDLSVVYREGANDFVVTFNTSHL--QKKYVKVLMHDVAYRQEKDENKW--THVNLSSTKLTLLQRKLQPA 182 (223)
T ss_dssp GGGSBCCCCCEEEEEEEETTTTEEEEEEECGGG--GCSSSCCEEEEEEEEESSCSSCC--EEEEESSSEEEEEGGGSCTT
T ss_pred ecceEEcCCCcceEEEEEcCCCCEEEEECCCCC--CCCcceeEEEEEEEEeCCCCCce--EEEEecCceeEEeccccCCC
Confidence 6666666689999997764 5789999999842 222 2689999999875 2333 223333 3335667899999
Q ss_pred ceEEEEEEEeeC----CCCCCCCCcEEeecCCCCC
Q psy8771 786 TEYRIWVLAGTS----IGDGPSSYPITIRTHEDDP 816 (904)
Q Consensus 786 t~Y~~~V~a~~~----~g~g~~s~~~~~~t~~~~P 816 (904)
+.|.|+|||... .+.|.+|.++.+.|.+.+|
T Consensus 183 t~Y~vqVR~r~~~~~~G~WSeWS~~~~~~T~~~~P 217 (223)
T 3up1_A 183 AMYEIKVRSIPDHYFKGFWSEWSPSYYFRTPEINN 217 (223)
T ss_dssp CEEEEEEEEEECSSCCBCCCCCCCCEEEECCCCC-
T ss_pred cEEEEEEEEeeCCCCCCCCCCCCCCeEEECCCCCC
Confidence 999999999985 2367889999999988887
No 494
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=98.87 E-value=2.7e-08 Score=109.89 Aligned_cols=149 Identities=11% Similarity=0.200 Sum_probs=84.7
Q ss_pred CCCCCcEEEeccC-Cc-eEEEEeCCCC------------CCCc------eecccccccccceEEEEeeeccCCeeeeeee
Q psy8771 35 TAPRDVQVRPLSS-ST-MVIQWDEPET------------PNGQ------ITHPPTRAARSHARLAAQSVLRRGRLAHAVR 94 (904)
Q Consensus 35 ~~p~~l~~~~~~~-~s-~~v~W~~~~~------------~~g~------i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 94 (904)
+....|.|...+. +. +.|.|.+... .+|. +........+ ....|...+..........+
T Consensus 147 g~~v~L~C~~~g~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v 225 (457)
T 1hzh_H 147 GGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKA 225 (457)
T ss_dssp TCCEEEEEEEESBBSCCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEEC
T ss_pred CCcEEEEEEEeEEeCCCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEe
Confidence 3566677776654 43 8999987652 1231 1111122223 44555555544443333322
Q ss_pred eccC------------CCCCCCCeE-EcCCCCceEEecCCCeEEEEEEccCCCC----eEEEeeCCccccCCCC---cee
Q psy8771 95 QVAD------------PVRRVPPQF-SIPPPALLEVMLDSPLNLSCVAVGSPMP----FVKWRKGQNIELTPDD---KLP 154 (904)
Q Consensus 95 ~v~~------------~~~~~~P~~-~~~~~~~~~~~~g~~~~l~C~~~g~p~p----~i~W~k~~~~~~~~~~---~~~ 154 (904)
.+.. ..+..+|.+ ..+|.....+.+|++++|.|.+.|.|.+ .|+|+|+ +..+.... ...
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~-~~~~~~~~~~~~~~ 304 (457)
T 1hzh_H 226 EPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVD-GVEVHNAKTKPREE 304 (457)
T ss_dssp CCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEET-TEEECCCEEEEEEE
T ss_pred cccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeC-Ccccccccccccee
Confidence 2211 011235665 5555431226789999999999998653 9999999 55554322 122
Q ss_pred ecceEEEEeee-----cC---CeEEEEEEEecCcceEEE
Q psy8771 155 VGRNVLTLDRV-----TE---SENYTCIAASVLGVIETS 185 (904)
Q Consensus 155 ~~~~~l~i~~l-----~d---~g~Y~c~a~n~~g~~~~~ 185 (904)
..++.|.|... .| +|.|+|.|.|..+.....
T Consensus 305 ~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~ 343 (457)
T 1hzh_H 305 QYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIE 343 (457)
T ss_dssp CTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEE
T ss_pred cCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcce
Confidence 34566666542 34 999999999876654333
No 495
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.87 E-value=6.5e-09 Score=101.39 Aligned_cols=158 Identities=14% Similarity=0.185 Sum_probs=95.6
Q ss_pred CeEEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC-cccc------------CCCCceee----cceEEEEeee--
Q psy8771 105 PQFSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVLTLDRV-- 165 (904)
Q Consensus 105 P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l~i~~l-- 165 (904)
|.|...|.. +.+.+|++++|.|.+.|.|.+.|.|+|+. +..+ ....|+.. +..+|.|.++
T Consensus 2 ~~v~~~p~~-~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 80 (213)
T 3nl4_L 2 VVMTQTPAS-VSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLEC 80 (213)
T ss_dssp CCEEEECSE-EEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCG
T ss_pred ccEEeCCCe-EEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCCh
Confidence 446666666 99999999999999999999999999842 1110 01245543 3348999999
Q ss_pred cCCeEEEEEEEecCc---ceEEEEEEEEEeecCCCCCCCCCCcceEEEe-----ecCCeEEEEEeCCC-ccceEEEEEEE
Q psy8771 166 TESENYTCIAASVLG---VIETSTIVKVQCKYAPLLTLPVAPLDVKISE-----VTATSVRLDWTYPS-ETLLYYVIQYK 236 (904)
Q Consensus 166 ~d~g~Y~c~a~n~~g---~~~~~~~l~v~~~~~~~~~~P~~p~~l~~~~-----~~~~sv~l~W~~~~-~~~~~y~v~~~ 236 (904)
+|+|.|+|.|.|..+ .......|.|. ..+.+|. +.+.. .....++|.+...+ .+ .-.|.|.
T Consensus 81 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~-------~~~~~p~-v~~~~~~~~~~~g~~v~l~C~~~g~~P--~~~v~W~ 150 (213)
T 3nl4_L 81 ADAATYYCQSTYENPTYVSFGGGTEVGVK-------GDPVAPT-VLIFPPSADLVATGTVTIVCVANKYFP--DVTVTWE 150 (213)
T ss_dssp GGCEEEEEEECCSSTTTCEECCCEEEEEE-------CCCBCCE-EEEECCCHHHHTTSEEEEEEEEEEEBS--CCEEEEE
T ss_pred HHCEEEEEecCCCCceeEEeCCCeEEEEe-------CCCcCCe-EEEeCCchhhccCCcEeEEEEEecccC--CcEEEEE
Confidence 699999999999877 34455667776 2222332 11111 11335555555432 22 1223443
Q ss_pred eCCCCCCe---EEe-----ec---ceeceEEEcCCCCCCeEEEEEEEE
Q psy8771 237 PKAANTPY---SEI-----SG---IITTYYTVRNLSPYTEYEFYIIAV 273 (904)
Q Consensus 237 ~~~~~~~~---~~~-----~~---~~~~~~~i~~L~p~~~Y~~~v~a~ 273 (904)
..+..... ... .. .....+.|......+.+.|+|.|.
T Consensus 151 k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 151 VDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp ETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred eCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 33211100 000 00 112457888888888999999998
No 496
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.87 E-value=8.1e-09 Score=99.62 Aligned_cols=154 Identities=10% Similarity=0.064 Sum_probs=91.7
Q ss_pred eEEecCCCeEEEEEEc----cCCCCeEEEeeCCccccC------------CCCceee---cceEEEEeee--cCCeEEEE
Q psy8771 115 LEVMLDSPLNLSCVAV----GSPMPFVKWRKGQNIELT------------PDDKLPV---GRNVLTLDRV--TESENYTC 173 (904)
Q Consensus 115 ~~~~~g~~~~l~C~~~----g~p~p~i~W~k~~~~~~~------------~~~~~~~---~~~~l~i~~l--~d~g~Y~c 173 (904)
+.+.+|+++.|.|.+. |.|.+.+.|.|+ +..+. ...|... ++.+|.|.++ +|+|.|+|
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~-~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C 82 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELAQTRIYWQKE-KKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTYEC 82 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHHHCEEEEEET-TEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEEEE
T ss_pred EEEEeCCCEEEecccCCCcccccccEEEEEeC-CcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEEEE
Confidence 7889999999999996 457789999998 54431 0123321 4578999999 69999999
Q ss_pred EEEecCcce-----EEEEEEEEEeecCCCCCCCCCCcceEEEeecCCeEEEEEeCC-CccceEEEEEEEeCCCCCC---e
Q psy8771 174 IAASVLGVI-----ETSTIVKVQCKYAPLLTLPVAPLDVKISEVTATSVRLDWTYP-SETLLYYVIQYKPKAANTP---Y 244 (904)
Q Consensus 174 ~a~n~~g~~-----~~~~~l~v~~~~~~~~~~P~~p~~l~~~~~~~~sv~l~W~~~-~~~~~~y~v~~~~~~~~~~---~ 244 (904)
.|.|..|.. .....|.|. ..+..|............++|.+... +.+.. .|.|...+.... .
T Consensus 83 ~~~~~~g~~~~~~~~~~~~l~V~-------~~~~~p~~~~~~~~~g~~~~l~C~~~~g~P~p--~i~W~k~g~~l~~~~~ 153 (201)
T 1dr9_A 83 VVLKYEKDAFKREHLAEVTLSVK-------ADFPTPSISDFEIPTSNIRRIICSTSGGFPEP--HLSWLENGEELNAINT 153 (201)
T ss_dssp EEEECCTTSCEEEEEEEEEEEEE-------CCCCCCEEEEEECSSTTEEEEEEEEEEESSCE--EEEEEESSCEECCSEE
T ss_pred EEEcCCCCccccccccEEEEEEc-------CCCCCCceEeccCCCCCeEEEEEecCCccCCC--EEEEEECCEECccccc
Confidence 999987764 346666666 33333432222222344566666653 22222 345544322100 0
Q ss_pred EEeecceeceE---EEcCCCCCCeEEEEEEEEcCCCC
Q psy8771 245 SEISGIITTYY---TVRNLSPYTEYEFYIIAVNNLGR 278 (904)
Q Consensus 245 ~~~~~~~~~~~---~i~~L~p~~~Y~~~v~a~n~~g~ 278 (904)
..........+ .+..+...+.+.|+|.|.|..|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~ 190 (201)
T 1dr9_A 154 TVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHLR 190 (201)
T ss_dssp EEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTCC
T ss_pred eEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcce
Confidence 11111110111 22344567889999999998775
No 497
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.86 E-value=3.4e-08 Score=99.72 Aligned_cols=87 Identities=15% Similarity=0.261 Sum_probs=63.4
Q ss_pred CCeEEcCCCCceEEecCCCeEEEEEEccCC------CCeEEEeeCC-cccc------------CCCCceee----cceEE
Q psy8771 104 PPQFSIPPPALLEVMLDSPLNLSCVAVGSP------MPFVKWRKGQ-NIEL------------TPDDKLPV----GRNVL 160 (904)
Q Consensus 104 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p------~p~i~W~k~~-~~~~------------~~~~~~~~----~~~~l 160 (904)
.+.+...|.. +.+.+|++++|.|.+.|.| .+.|.|+|.. +..+ ....|+.+ ...+|
T Consensus 5 ~~~v~q~p~~-v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L 83 (264)
T 2gjj_A 5 DIVLTQTPSS-LPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTL 83 (264)
T ss_dssp CCCEEEECSE-EEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEE
T ss_pred ccceEecCCe-EEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEE
Confidence 3556666776 8999999999999999998 6889999842 2111 01345554 24589
Q ss_pred EEeee--cCCeEEEEEEEecCcc-eEEEEEEEEE
Q psy8771 161 TLDRV--TESENYTCIAASVLGV-IETSTIVKVQ 191 (904)
Q Consensus 161 ~i~~l--~d~g~Y~c~a~n~~g~-~~~~~~l~v~ 191 (904)
.|.++ +|+|.|.|.+.|..+. ....+.|.|.
T Consensus 84 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~ 117 (264)
T 2gjj_A 84 TIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIK 117 (264)
T ss_dssp EESSCCGGGCEEEEEEECSSSSCEECCCEEEEEE
T ss_pred EECCCCHHHCEEEEEEEecCCccEecCCEEEEEE
Confidence 99999 6999999999987653 2234567776
No 498
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=98.86 E-value=7.6e-08 Score=93.84 Aligned_cols=134 Identities=17% Similarity=0.142 Sum_probs=101.7
Q ss_pred cceEEEeCCCCCcEEEEEEEEEcCCCCCCCCCCeeEEecCCCCCCCCCCcEEEecCCCEEEEEecCCCCCCCCccEEEEE
Q psy8771 674 VETYSLTGLYPNTLYYIWLAAQSPRGEGATTPPIPVRTKQYVPGAPPQNVSCEPLSSTSIRISWEPPPVERSNGHIVYYK 753 (904)
Q Consensus 674 ~~~~~l~~L~p~t~Y~v~V~a~~~~G~~~~s~~~~~~t~~~~p~~~P~~l~~~~~~~~~v~l~W~~~~~~~~~g~~~~Y~ 753 (904)
...+.|.++.......+++.|.|..|.... .+.+.. ..+|. +|..+.+. ....++.|+|..|.. ..+.++.+|.
T Consensus 75 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~v-~~~P~-~p~~~~~~-~~~~~~~l~w~~p~~-~~~~pi~~y~ 148 (215)
T 3mtr_A 75 ASYLEVTPDSENDFGNYNCTAVNRIGQESL--EFILVQ-ADTPS-SPSIDQVE-PYSSTAQVQFDEPEA-TGGVPILKYK 148 (215)
T ss_dssp EEEEEECCCSGGGCEEEEEEEECSSCEEEE--EEEEEE-CCCCC-CCEEEEEE-EETTEEEEEEECCSC-CCSSCEEEEE
T ss_pred eeEEEEecCChhhCeEEEEEEEECCCceEE--EEEEEE-CCCCC-CCcceEEE-EecceEEEEEecCCc-cCCCceEEEE
Confidence 467899999999999999999999876422 222222 23343 56777764 467889999998752 3455899999
Q ss_pred EEEEEccCCCCccEEEEec---CcceEEecCCCCCceEEEEEEEeeCCCCCCCCCcEEeecCC
Q psy8771 754 LQFVETGRSDSEASIVTLK---NQTSFVLDELKKWTEYRIWVLAGTSIGDGPSSYPITIRTHE 813 (904)
Q Consensus 754 v~~~~~~~~~~~~~~~~~~---~~~~~~i~~L~p~t~Y~~~V~a~~~~g~g~~s~~~~~~t~~ 813 (904)
|+|+..+...+........ ....+.|.+|.+++.|.|+|+|.|..|.|.+|..+.++|.+
T Consensus 149 v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~s~~S~~~~v~T~p 211 (215)
T 3mtr_A 149 AEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGLGEISAASEFKTQP 211 (215)
T ss_dssp EEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCBCCCCCCEEEECCC
T ss_pred EEEEECCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcccCcccceeeEecc
Confidence 9999987665533322222 33889999999999999999999999999999999999865
No 499
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=98.86 E-value=9.9e-09 Score=92.63 Aligned_cols=88 Identities=17% Similarity=0.322 Sum_probs=68.4
Q ss_pred EEcCCCCceEEecCCCeEEEEEEccCCCCeEEEeeCC--------ccccCCCCceee-----cceEEEEeee--cCCeEE
Q psy8771 107 FSIPPPALLEVMLDSPLNLSCVAVGSPMPFVKWRKGQ--------NIELTPDDKLPV-----GRNVLTLDRV--TESENY 171 (904)
Q Consensus 107 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~k~~--------~~~~~~~~~~~~-----~~~~l~i~~l--~d~g~Y 171 (904)
+...|.. +.+.+|++++|.|.+.+.|.+.|.|++.+ +..+. ..|+.. .+.+|.|.++ +|+|.|
T Consensus 41 ~~~~p~~-~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~-~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y 118 (145)
T 1z9m_A 41 SQPWTSD-ETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALR-DNRIQLVTSTPHELSISISNVALADEGEY 118 (145)
T ss_dssp TCCBCCC-EEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSC-CTTEEEEEECSSEEEEEECSCCGGGCEEE
T ss_pred eecCCce-EEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecc-cCCEEEecCCCCeEEEEECCCChhhCEEE
Confidence 3445566 99999999999999999999999999421 33332 345543 2578999999 699999
Q ss_pred EEEEEecCcceEEEEEEEEEeecCCCCCCCCCC
Q psy8771 172 TCIAASVLGVIETSTIVKVQCKYAPLLTLPVAP 204 (904)
Q Consensus 172 ~c~a~n~~g~~~~~~~l~v~~~~~~~~~~P~~p 204 (904)
+|.+.|. |.....+.|.|. .+|.+|
T Consensus 119 ~C~~~n~-~~~~~~~~L~V~-------~~P~~P 143 (145)
T 1z9m_A 119 TCSIFTM-PVRTAKSLVTVL-------GIPQKP 143 (145)
T ss_dssp EEEECSS-SCEEEEEEEEEE-------CCCC--
T ss_pred EEEEEcC-CCceEEEEEEEE-------eCCCCC
Confidence 9999999 888999999998 666555
No 500
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.86 E-value=4.9e-08 Score=98.21 Aligned_cols=170 Identities=13% Similarity=0.140 Sum_probs=99.0
Q ss_pred CCCeEEcCCCCceEEecCCCeEEEEEEccC--CCCeEEEeeCC-cccc-----------------CCCCceeec------
Q psy8771 103 VPPQFSIPPPALLEVMLDSPLNLSCVAVGS--PMPFVKWRKGQ-NIEL-----------------TPDDKLPVG------ 156 (904)
Q Consensus 103 ~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~--p~p~i~W~k~~-~~~~-----------------~~~~~~~~~------ 156 (904)
.+|.+...+.. +++.+|++++|.|.+.|. |.+.|.|+|.. +..+ ....|+.+.
T Consensus 5 ~~~~~~~~~~~-~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 83 (256)
T 3juy_B 5 HHQVQLVQSGA-EVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSAN 83 (256)
T ss_dssp --CCEEEECCC-EEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTT
T ss_pred cceEEEEecCC-ceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCC
Confidence 45667777777 999999999999999994 67889999732 1110 012355442
Q ss_pred ceEEEEeee--cCCeEEEEEEEec------------CcceEEEEEEEEEeecCC-----------CCCCCCCCcceEEEe
Q psy8771 157 RNVLTLDRV--TESENYTCIAASV------------LGVIETSTIVKVQCKYAP-----------LLTLPVAPLDVKISE 211 (904)
Q Consensus 157 ~~~l~i~~l--~d~g~Y~c~a~n~------------~g~~~~~~~l~v~~~~~~-----------~~~~P~~p~~l~~~~ 211 (904)
..+|.|.++ +|+|.|.|.+.|. .+.......|.|...... .......|..+.+
T Consensus 84 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-- 161 (256)
T 3juy_B 84 TAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSL-- 161 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEE--
T ss_pred EEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEE--
Confidence 236999999 6999999999986 333444566777621000 0000011222222
Q ss_pred ecCCeEEEEEeCCCccceEEEEEEEeC--CC----------------CCCeEEeecceeceEEEcCCCCCCeEEEEEEEE
Q psy8771 212 VTATSVRLDWTYPSETLLYYVIQYKPK--AA----------------NTPYSEISGIITTYYTVRNLSPYTEYEFYIIAV 273 (904)
Q Consensus 212 ~~~~sv~l~W~~~~~~~~~y~v~~~~~--~~----------------~~~~~~~~~~~~~~~~i~~L~p~~~Y~~~v~a~ 273 (904)
....+++|.+...+.+. ...|.|... +. ...+..........|.|.++++.+.+.|.|.|.
T Consensus 162 ~~G~~v~L~C~~~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 240 (256)
T 3juy_B 162 SPGERATFSCRSSHSIR-SRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVY 240 (256)
T ss_dssp CTTSCEEEEEEESSCCT-TCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEEC
T ss_pred eCCCCEEEEEEECCCcC-CeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEe
Confidence 23445666665542221 012223211 11 111221122334569999999999999999998
Q ss_pred cCC
Q psy8771 274 NNL 276 (904)
Q Consensus 274 n~~ 276 (904)
|..
T Consensus 241 ~~~ 243 (256)
T 3juy_B 241 GAS 243 (256)
T ss_dssp CSS
T ss_pred eCC
Confidence 853
Done!