Query psy8773
Match_columns 1773
No_of_seqs 818 out of 2762
Neff 5.4
Searched_HMMs 46136
Date Fri Aug 16 18:55:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8773.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8773hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4228|consensus 100.0 1E-134 2E-139 1269.2 39.8 561 711-1660 523-1086(1087)
2 KOG4228|consensus 100.0 5E-133 1E-137 1253.9 44.4 577 177-997 509-1086(1087)
3 PHA02740 protein tyrosine phos 100.0 1.1E-65 2.3E-70 600.3 28.3 278 196-487 7-290 (298)
4 PHA02742 protein tyrosine phos 100.0 2.3E-65 5.1E-70 600.2 30.2 287 197-487 8-298 (303)
5 PHA02747 protein tyrosine phos 100.0 1.2E-63 2.7E-68 587.6 29.8 288 196-487 7-301 (312)
6 PHA02742 protein tyrosine phos 100.0 2.1E-63 4.6E-68 583.7 29.2 284 702-999 13-299 (303)
7 PHA02746 protein tyrosine phos 100.0 4.5E-63 9.6E-68 585.1 30.0 287 198-488 9-317 (323)
8 KOG0790|consensus 100.0 6.3E-65 1.4E-69 583.8 12.2 331 666-1005 146-530 (600)
9 KOG0790|consensus 100.0 1.7E-63 3.6E-68 572.1 19.7 283 196-487 218-523 (600)
10 PHA02738 hypothetical protein; 100.0 3.6E-62 7.7E-67 576.8 28.9 283 198-488 9-297 (320)
11 PHA02740 protein tyrosine phos 100.0 4.3E-62 9.3E-67 570.1 25.5 245 743-999 42-291 (298)
12 KOG0791|consensus 100.0 1.5E-62 3.3E-67 563.4 21.2 281 196-489 76-358 (374)
13 PHA02747 protein tyrosine phos 100.0 4.1E-61 8.9E-66 566.2 28.5 286 701-1000 11-303 (312)
14 PHA02746 protein tyrosine phos 100.0 3.3E-61 7.2E-66 569.2 24.8 255 743-999 42-317 (323)
15 PHA02738 hypothetical protein; 100.0 5.1E-60 1.1E-64 558.5 26.7 249 750-1001 47-299 (320)
16 KOG0792|consensus 100.0 9.6E-60 2.1E-64 585.5 28.1 277 199-489 853-1134(1144)
17 smart00194 PTPc Protein tyrosi 100.0 8.5E-58 1.8E-62 524.7 28.2 254 218-483 2-258 (258)
18 KOG0792|consensus 100.0 2.3E-57 4.9E-62 564.4 23.6 246 744-1001 886-1135(1144)
19 smart00194 PTPc Protein tyrosi 100.0 1.5E-55 3.3E-60 506.1 26.5 254 1297-1657 4-258 (258)
20 KOG0791|consensus 100.0 1.3E-55 2.8E-60 506.4 18.4 250 740-1002 110-360 (374)
21 cd00047 PTPc Protein tyrosine 100.0 8.5E-53 1.8E-57 475.4 27.0 230 243-483 1-231 (231)
22 cd00047 PTPc Protein tyrosine 100.0 3E-52 6.5E-57 470.9 24.7 230 754-994 1-231 (231)
23 KOG0793|consensus 100.0 6.2E-53 1.3E-57 501.7 17.2 259 217-486 733-996 (1004)
24 KOG0793|consensus 100.0 1.2E-52 2.7E-57 499.2 13.1 243 744-997 751-996 (1004)
25 COG5599 PTP2 Protein tyrosine 100.0 4.5E-51 9.9E-56 450.0 21.1 236 232-485 44-294 (302)
26 PF00102 Y_phosphatase: Protei 100.0 1.8E-50 4E-55 453.0 21.7 230 241-483 1-235 (235)
27 PF00102 Y_phosphatase: Protei 100.0 4E-50 8.7E-55 450.3 21.6 230 752-994 1-235 (235)
28 COG5599 PTP2 Protein tyrosine 100.0 2.3E-50 5E-55 444.4 16.8 238 741-996 42-294 (302)
29 PRK15375 pathogenicity island 100.0 4.7E-48 1E-52 461.7 25.8 272 199-486 254-531 (535)
30 PRK15375 pathogenicity island 100.0 9.1E-46 2E-50 442.2 22.1 226 757-998 303-532 (535)
31 KOG0789|consensus 100.0 6.7E-44 1.5E-48 434.6 25.8 271 202-487 88-369 (415)
32 KOG0789|consensus 100.0 8.4E-43 1.8E-47 424.9 22.3 271 701-999 89-370 (415)
33 smart00404 PTPc_motif Protein 99.8 2.8E-20 6E-25 183.3 11.7 104 1551-1657 1-105 (105)
34 smart00012 PTPc_DSPc Protein t 99.8 2.8E-20 6E-25 183.3 11.7 104 1551-1657 1-105 (105)
35 smart00012 PTPc_DSPc Protein t 99.8 7E-20 1.5E-24 180.4 10.6 104 371-483 1-105 (105)
36 smart00404 PTPc_motif Protein 99.8 7E-20 1.5E-24 180.4 10.6 104 371-483 1-105 (105)
37 PTZ00242 protein tyrosine phos 99.5 6.5E-14 1.4E-18 152.4 13.2 95 1553-1656 60-156 (166)
38 PTZ00242 protein tyrosine phos 99.3 2.9E-12 6.2E-17 139.7 10.4 136 284-481 16-155 (166)
39 KOG2836|consensus 99.3 7.5E-12 1.6E-16 127.6 10.8 87 1552-1646 60-147 (173)
40 PTZ00393 protein tyrosine phos 99.2 4E-11 8.8E-16 135.6 12.4 85 1558-1656 143-227 (241)
41 KOG1720|consensus 99.1 5.4E-10 1.2E-14 122.7 11.5 103 1557-1671 118-222 (225)
42 PTZ00393 protein tyrosine phos 99.0 2.5E-09 5.4E-14 121.3 11.4 135 283-480 91-225 (241)
43 cd00127 DSPc Dual specificity 98.8 2.1E-08 4.6E-13 104.8 8.9 87 1549-1646 47-133 (139)
44 KOG1720|consensus 98.7 3.4E-08 7.3E-13 108.9 9.0 84 380-482 123-206 (225)
45 COG2453 CDC14 Predicted protei 98.6 2.1E-07 4.5E-12 103.1 10.0 91 1555-1656 73-165 (180)
46 cd00127 DSPc Dual specificity 98.6 1.6E-07 3.4E-12 98.3 8.5 89 881-989 48-136 (139)
47 smart00195 DSPc Dual specifici 98.5 5.9E-07 1.3E-11 94.4 10.3 53 1589-1646 78-130 (138)
48 PF00782 DSPc: Dual specificit 98.3 1.8E-06 3.8E-11 90.1 8.1 74 1570-1654 57-130 (133)
49 COG2453 CDC14 Predicted protei 98.2 4.5E-06 9.7E-11 92.6 9.4 90 889-995 78-167 (180)
50 KOG2836|consensus 98.2 6.3E-06 1.4E-10 85.2 8.6 132 795-988 17-149 (173)
51 smart00195 DSPc Dual specifici 98.0 2.4E-05 5.2E-10 82.3 9.6 56 929-989 78-133 (138)
52 PRK12361 hypothetical protein; 97.8 4.4E-05 9.6E-10 98.2 10.0 77 1562-1646 152-228 (547)
53 PF00782 DSPc: Dual specificit 97.8 4.6E-05 9.9E-10 79.5 7.3 57 929-990 73-129 (133)
54 PF05706 CDKN3: Cyclin-depende 97.1 0.00082 1.8E-08 73.4 6.3 52 1558-1613 106-157 (168)
55 PRK12361 hypothetical protein; 97.0 0.0019 4E-08 83.5 9.0 89 884-990 144-232 (547)
56 KOG1719|consensus 96.5 0.0067 1.5E-07 65.0 7.4 81 1564-1660 88-168 (183)
57 PF03162 Y_phosphatase2: Tyros 95.7 0.02 4.3E-07 63.1 6.8 72 1551-1633 58-129 (164)
58 PF05706 CDKN3: Cyclin-depende 95.7 0.01 2.2E-07 65.2 4.3 122 780-950 24-154 (168)
59 KOG1718|consensus 95.6 0.041 8.9E-07 60.0 8.4 79 1550-1636 56-136 (198)
60 PF14566 PTPlike_phytase: Inos 95.1 0.017 3.6E-07 62.7 3.3 50 379-442 99-148 (149)
61 PF14566 PTPlike_phytase: Inos 95.0 0.016 3.4E-07 62.9 3.0 56 1554-1613 92-148 (149)
62 PF03162 Y_phosphatase2: Tyros 95.0 0.021 4.6E-07 62.9 3.9 71 883-973 59-129 (164)
63 KOG2283|consensus 94.6 0.029 6.3E-07 70.3 4.2 91 1558-1656 78-172 (434)
64 KOG1716|consensus 93.6 0.25 5.4E-06 59.2 9.3 81 1554-1642 121-203 (285)
65 TIGR01244 conserved hypothetic 93.3 0.18 3.9E-06 53.9 6.6 39 1589-1634 86-124 (135)
66 KOG2283|consensus 93.2 0.21 4.6E-06 62.8 8.0 88 378-479 78-169 (434)
67 COG5350 Predicted protein tyro 93.2 0.43 9.3E-06 51.7 9.0 84 371-471 58-142 (172)
68 COG5350 Predicted protein tyro 92.4 0.35 7.5E-06 52.4 7.1 78 1554-1641 61-141 (172)
69 KOG1718|consensus 92.0 0.41 9E-06 52.6 7.2 45 929-978 94-138 (198)
70 PF13350 Y_phosphatase3: Tyros 91.2 0.15 3.3E-06 55.9 3.0 38 1364-1402 20-57 (164)
71 KOG0196|consensus 90.8 0.8 1.7E-05 60.3 9.2 94 51-156 397-524 (996)
72 KOG1717|consensus 90.8 0.45 9.8E-06 55.4 6.3 53 1576-1633 241-293 (343)
73 PLN02727 NAD kinase 90.6 0.29 6.3E-06 65.5 5.2 43 1565-1612 322-364 (986)
74 KOG1716|consensus 90.2 0.59 1.3E-05 56.0 7.1 49 929-982 155-203 (285)
75 PF13350 Y_phosphatase3: Tyros 90.0 0.35 7.7E-06 53.0 4.5 38 796-834 20-57 (164)
76 TIGR01244 conserved hypothetic 88.7 1 2.2E-05 48.1 6.8 57 388-466 71-127 (135)
77 PF04273 DUF442: Putative phos 87.8 0.58 1.3E-05 48.6 4.1 51 1555-1612 58-108 (110)
78 COG2365 Protein tyrosine/serin 87.1 0.76 1.7E-05 54.1 5.0 32 1589-1620 136-167 (249)
79 KOG4221|consensus 86.7 2.6 5.6E-05 57.9 9.8 99 47-156 569-700 (1381)
80 KOG1719|consensus 86.4 3 6.4E-05 45.6 8.4 59 930-997 110-168 (183)
81 PF04273 DUF442: Putative phos 79.8 1.8 4E-05 45.0 3.7 38 899-952 71-108 (110)
82 COG2365 Protein tyrosine/serin 78.2 2.8 6.1E-05 49.5 5.1 27 929-955 136-162 (249)
83 KOG1717|consensus 75.7 2.8 6.1E-05 49.2 3.9 26 929-954 251-276 (343)
84 KOG4471|consensus 74.3 3.4 7.4E-05 52.9 4.5 25 929-953 374-398 (717)
85 KOG4471|consensus 74.1 3.7 8E-05 52.7 4.7 26 1589-1614 374-399 (717)
86 PLN02727 NAD kinase 73.3 4.1 9E-05 55.2 5.1 40 899-952 325-364 (986)
87 KOG2386|consensus 62.9 12 0.00025 47.0 5.7 132 1559-1701 93-226 (393)
88 PF00041 fn3: Fibronectin type 59.7 19 0.00041 33.8 5.5 72 71-153 6-79 (85)
89 KOG4221|consensus 59.4 39 0.00084 47.3 9.9 93 52-158 483-602 (1381)
90 PF06602 Myotub-related: Myotu 54.3 16 0.00035 45.4 5.1 26 1589-1614 231-256 (353)
91 PF00041 fn3: Fibronectin type 53.7 10 0.00023 35.6 2.6 28 47-74 51-78 (85)
92 KOG1572|consensus 40.2 39 0.00085 39.7 4.8 27 1589-1615 148-174 (249)
93 PF09294 Interfer-bind: Interf 39.8 36 0.00079 34.2 4.2 26 46-71 61-86 (106)
94 KOG1089|consensus 39.5 22 0.00047 46.5 3.0 58 1589-1646 344-440 (573)
95 KOG2386|consensus 39.3 71 0.0015 40.3 7.2 84 376-472 90-173 (393)
96 KOG1572|consensus 35.3 66 0.0014 38.0 5.7 19 419-437 149-167 (249)
97 PF06602 Myotub-related: Myotu 34.5 35 0.00076 42.5 3.7 24 929-952 231-254 (353)
98 smart00060 FN3 Fibronectin typ 29.1 68 0.0015 28.3 3.8 23 51-73 56-78 (83)
99 COG3453 Uncharacterized protei 27.2 78 0.0017 33.9 4.1 29 1589-1618 87-115 (130)
100 smart00060 FN3 Fibronectin typ 25.2 2E+02 0.0044 25.2 6.1 64 80-152 16-79 (83)
101 KOG1089|consensus 24.4 56 0.0012 42.9 3.0 24 929-952 344-367 (573)
102 cd00063 FN3 Fibronectin type 3 22.4 1.1E+02 0.0024 27.9 3.9 25 50-74 55-79 (93)
103 PRK08455 fliL flagellar basal 20.3 1.8E+02 0.0039 33.2 5.7 50 1689-1738 16-99 (182)
No 1
>KOG4228|consensus
Probab=100.00 E-value=1.1e-134 Score=1269.20 Aligned_cols=561 Identities=56% Similarity=0.952 Sum_probs=517.8
Q ss_pred cccchhHHHHHHHHhcCCc--ccccccCCCCCCcccccchhhhhhcccccccccccCCceeEeeccCCCCCCCceeeEec
Q psy8773 711 EGVIDLFQTVRILRTQRPA--MVQTESIEPGQQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINANYC 788 (1773)
Q Consensus 711 ~~~~~~~~~~~~lr~~~~~--~~~~e~~~~~~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~Ls~~~g~~~sDYINASyI 788 (1773)
..+.++.+++..++++... ..++|+++.| +.+|+++..++|+.||||.||++|||+||+|...+|++++||||||||
T Consensus 523 I~v~dl~~~i~~~~~~~~~~F~~Eyesl~~~-~~~~~~s~~~en~~KNRY~nilayD~sRV~L~~i~Gd~~sDYINAnyI 601 (1087)
T KOG4228|consen 523 IPVADLLEHIERRKADDGYGFKQEYESLPEG-QFTWEHSNKKENKQKNRYENILAYDHSRVILPPIEGDPNSDYINANYI 601 (1087)
T ss_pred ccHHHHHHHHHHhhcccccchHHHHhhcccc-CCccccCccccccccccCCcchhhhcceeeecccCCCccccceeeeee
Confidence 4577888999998886544 4568899999 899999999999999999999999999999999999999999999999
Q ss_pred cCcCCCCceEEecCCCCCChhhhhhheeecCCcEEEEccCcccccccccccccCCCCceeeecEEEEEEEEEeecCEEEE
Q psy8773 789 DGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRGTETYGHITVTLQDVQELASYCIR 868 (1773)
Q Consensus 789 dGy~~~~~yIaTQgPL~~Tv~DFWrMVwE~~v~vIVMLt~l~E~gk~KC~qYWP~~~~~~yG~~tVtl~~~~~~~~yiiR 868 (1773)
|||+.+++|||||||+++|++||||||||+++.+|||+|++.|.++.||.+||| ++.++||++.|++.+.....+|++|
T Consensus 602 dGy~e~n~yIaaQgP~~eTv~DFWRMVWEq~S~~IVMvTnl~E~~r~kC~qYWP-~~t~~yGdi~V~~~~~~~~a~y~iR 680 (1087)
T KOG4228|consen 602 DGYKEPNAYIAAQGPRPETVGDFWRMVWEQKSAGIVMVTNLEEFSRVKCAQYWP-EGTETYGDIKVTLVQTKPLAEYGIR 680 (1087)
T ss_pred ecccccccceeccCCcccchHHHHHHheeccCCcEEEEecccccccccccccCC-CCccccccccccceeeeeeccceEE
Confidence 999999999999999999999999999999999999999999999999999999 7889999999999999999999999
Q ss_pred EEEEEeCCCCceeEEEEEEeCCCCCCCCCCCChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhH
Q psy8773 869 TFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIV 948 (1773)
Q Consensus 869 tl~V~~~~~~~~R~V~hfhyt~WPD~gVP~s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIA 948 (1773)
+|.|...+....|.|+||||++|||||+|..+.++|.|+++|+..++.. .||||||||||+||||+|++
T Consensus 681 tf~l~~~g~~~~R~v~qfhFt~Wpd~gvPe~~t~lL~f~rrvk~~~p~~-----------aGPiVVHCSAGvGRTG~fi~ 749 (1087)
T KOG4228|consen 681 TFALKKQGENPKREVRQFHFTAWPDHGVPETPTGLLKFRRRVKTFNPPD-----------AGPIVVHCSAGVGRTGCFIV 749 (1087)
T ss_pred eeeccccCCCCCceeeeeeeccCCCCCCcccchHHHHHHHHhccCCCcC-----------CCCEEEECCCCCCCcceEEE
Confidence 9999998888899999999999999999999999999999999987543 69999999999999999999
Q ss_pred HHHHHHHHhhCCCcchHHHHHHHHhccccccCChhhhhhHHHHHHHHHHcCCccccccccccccCCCCCcccCchhhhhh
Q psy8773 949 IDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVLCGNTEIPASSQMITRKDDPTVSLQDPYIAAK 1028 (1773)
Q Consensus 949 Id~lLeql~~e~~VDVf~~Vk~LR~QR~~mVQT~eQY~FiY~aLlEyl~~g~tei~~~~~~~~~~~~~~~~~~~~~~~~k 1028 (1773)
||+|+++++.|+.+||++.|+.||.||+.||||.+||.|||+|++|+.+||+|++++++
T Consensus 750 iDaml~~~~~e~~vdiy~~v~~lR~QR~~mVQt~eQYiFi~~AllE~~~~G~T~i~~~~--------------------- 808 (1087)
T KOG4228|consen 750 IDAMLDRLECEGKVDIYGHVKTLRRQRNNMVQTEEQYIFIHEALLEACLCGDTEVPAST--------------------- 808 (1087)
T ss_pred eHHHHHHHHhhCccceechhHHHHhccccccccHHHHHHHHHHHHHHHhcCCccccHHH---------------------
Confidence 99999999999999999999999999999999999999999999999999999998842
Q ss_pred ccccCCccccccCCCcccccchhhhhhcccccceeeeccccCccccccCCCcchhhhhccccCCCCCCCCCCCCCCCCCC
Q psy8773 1029 FSQRNIPYTFHLGNGQTYEGFVNKKLVRGLKYRIFVRAIVDTPQKHLYTSSPFSEQLALDMREVPPGPPLKRPDPNIPGD 1108 (1773)
Q Consensus 1029 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 1108 (1773)
T Consensus 809 -------------------------------------------------------------------------------- 808 (1087)
T KOG4228|consen 809 -------------------------------------------------------------------------------- 808 (1087)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCccCCccccccccchhhcccccccccCCcccceeeecc
Q psy8773 1109 VRKDPCTSTSRSSCPWSAIPGDNQYKPSTRISVTTQMAAPQPLVKPDFYGVVNGEEIQVILPQASEEYGPISHYYLIVVP 1188 (1773)
Q Consensus 1109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1188 (1773)
T Consensus 809 -------------------------------------------------------------------------------- 808 (1087)
T KOG4228|consen 809 -------------------------------------------------------------------------------- 808 (1087)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCCCCccchhhhhccCCCCCccCCchhhhhhhhhhhhhhccccccCCCCchhHHHHhhccCCCCCCccccccCC
Q psy8773 1189 EDKMTYDKQPDQFLTDEMITRKDDPTVSLQDPYIAAKSLHVHIQKLMSMEVGDTSTGMELEFKKLSNIRAEPSRFISASL 1268 (1773)
Q Consensus 1189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ef~~l~~~~~~~~~~~~~~~ 1268 (1773)
|+.|+++|.+++++.++++||+|||+|+...+....+
T Consensus 809 --------------------------------------~~~~~~~l~~~~p~~~~t~le~EF~~L~~~~~~~~~~----- 845 (1087)
T KOG4228|consen 809 --------------------------------------LAPYSQKLKRIDPPENKTGLEEEFKTLNSCKPRTRMM----- 845 (1087)
T ss_pred --------------------------------------HHHHHHHhccCCCCCCCcchHHHHHHHhhccccchhh-----
Confidence 2233444445566678899999999999877664322
Q ss_pred cccccccccccccccccccccccccCCccchhccccccCCCccccccCCCcccCCCCCCCCCCCCCCceecccCCCCCCC
Q psy8773 1269 PCNKHKNRLVHILPVESSRVCLTPVRGKTEFKKLSNIRAEPSRFISASLPCNKHKNRLVHILPVESSRVCLTPVRGIEGS 1348 (1773)
Q Consensus 1269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~knr~~~~~p~d~~rv~L~~~~~~~~s 1348 (1773)
++|++++|+.|||.++|+|+|++||+|.+.+|. +|
T Consensus 846 --------------------------------------------~~~~l~~N~~KNR~~~i~P~d~~rv~L~~~~G~-~s 880 (1087)
T KOG4228|consen 846 --------------------------------------------ICGNLPENKSKNRQVNILPYDRNRVILIPTHGE-SS 880 (1087)
T ss_pred --------------------------------------------hccccchhcccccccccCCchhcccceeccCCC-cc
Confidence 258999999999999999999999999999997 89
Q ss_pred CcceeeeeccccCCCeEEEecCCCcccHHHHHHHHHhccccEEEEcccccccCceeeeeeeecccccccccceeeeeecC
Q psy8773 1349 DYINASFIDGYRLRSAYIATQGPLADTTEDFWRMLWEHNSTIVVMLTKLKEMGRYVLREFKVTDARDATSRTLRQFQLID 1428 (1773)
Q Consensus 1349 dYINAsfidGY~~~~~fI~TQ~Pl~~Tv~DFWrMV~e~~~~~IVmL~~~~e~~~~~~r~~~~~~~~~~~~~~v~q~~~~~ 1428 (1773)
|||||||||||+++++|||||+||++|++|||||||||+|++||||++++++
T Consensus 881 dYINAs~idgy~~~~~fivtq~PL~~T~~DFWrmi~d~~~tsiVmL~~l~~~---------------------------- 932 (1087)
T KOG4228|consen 881 DYINASFIDGYRQPKAFIVTQGPLAETVEDFWRMIWDQNVTSIVMLTELKHP---------------------------- 932 (1087)
T ss_pred cccchhhhcccCCcceEEEecCCcccchHHHHHHhhccceeEEEEecccCcc----------------------------
Confidence 9999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCCCCCCCcchhhhhhhcccccccCCCCCeEEEecccccccccccccccccCcccccccchhhhhhhhhcccccccc
Q psy8773 1429 WPEQGVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSLLSLHINLTQSEWGREKPVAQLSFCSVLIAYLVLFSQEKCHQ 1508 (1773)
Q Consensus 1429 Wp~~~~p~~~~~~~d~~~~v~~~~~~~~~~gpi~vhc~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~ 1508 (1773)
++|+|
T Consensus 933 ---------------------------------------------------------------------------~~C~q 937 (1087)
T KOG4228|consen 933 ---------------------------------------------------------------------------EKCPQ 937 (1087)
T ss_pred ---------------------------------------------------------------------------ccccc
Confidence 58999
Q ss_pred ccCCCCceeeEeEEEEEeeeecCCCeEEEEEEEEeCCCCCceEEeeEEecCCCCCCCCCChhhHHHH-HHHHHHHhhhcC
Q psy8773 1509 YWPSERSIRYEWFVVEPIAEYNMPQYVLREFKVTDARDATSRTLRQFQLIDWPEQGVPKSGDGFIDF-IGQVHKTKEQFG 1587 (1773)
Q Consensus 1509 ywp~~~~~~yG~~~V~~~se~~~~~yi~R~f~Vt~~~~~~~r~V~qfQ~~~WPd~gvP~s~~~lidl-I~~V~k~q~~~~ 1587 (1773)
|||.+++..||.|.|+.+++..+++|+.|+|.|++.+++.+|+|+||||++||..++|+.....+.+ +..+.++++. +
T Consensus 938 yw~~~g~~~yg~i~Ve~~~~~~~~~~t~r~f~i~n~~~~~~r~v~qfq~~~WP~~~~~p~~~~~~~~i~~~~~~~q~~-~ 1016 (1087)
T KOG4228|consen 938 YWPPEGSQRYGPIEVEDMNEHINPQYTAREFGVTNEREKQSRTVRQFQFTGWPEYGKPPQSKGPISKIPSVASKWQQL-G 1016 (1087)
T ss_pred ccCCcCceecCcEEEEecccccchhhhhhhheeeeccccCceEEEEEEecCCcccCcCCCCcchhhhHHHHHHHHHhh-c
Confidence 9999999999999999999999999999999999999999999999999999987766665555544 4455555554 4
Q ss_pred CCCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHHHHHHhcCCCCCCChhhhccccHHHHHHHHhhc
Q psy8773 1588 QDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRILRTQRPAMVQTEHLYTSSPFSEQLALDMRE 1660 (1773)
Q Consensus 1588 ~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtVK~lR~~RPgmVqT~eQY~~~~f~Y~~~~ey~~ 1660 (1773)
.++|++|||++|+||+|+|||++++++||+.|+.|||||+||+||.+||+||++.+||+ |||+++++|++
T Consensus 1017 ~~~P~~Vhc~nG~~rsg~f~ai~~l~e~~~~e~~vDVfq~vk~Lr~~rp~mv~t~~QY~---fcYdv~~~y~~ 1086 (1087)
T KOG4228|consen 1017 ADGPIIVHCLNGVGRTGTFCAISILLERMRKEGVVDVFQTVKTLRFQRPGMVDTSDQYQ---FCYDVALEYLG 1086 (1087)
T ss_pred CCCCEEEEEcCCCcceeehHHHHHHHHHHhhcCceeeehhhhhhhhcCccccCcHHHHH---HHHHHHHHhhc
Confidence 58999999999999999999999999999999999999999999999999999999999 99999999986
No 2
>KOG4228|consensus
Probab=100.00 E-value=5.4e-133 Score=1253.93 Aligned_cols=577 Identities=52% Similarity=0.919 Sum_probs=530.6
Q ss_pred CChhhhhccccCCCCCCCCCCccHHHHHHHHHHHhhCCchhHHHHHhhcCCCCcccccccccccccccCCCCCCCCCCCc
Q psy8773 177 SDPVEMRRLNFQTPGMVSHPPIPISRLAQHIENLKANDNLKFSQEYESIEPGQQFTWDHSSMEMNKAKNRYANVIAYDHS 256 (1773)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~v~~l~a~~~~~f~~Efe~I~~~~~~t~~~s~~~~N~~KNRY~nIlpyD~S 256 (1773)
++++.+++++ +| .||++++|.+|+++++++++++|++|||+|+.+ +.+|.++.+++|+.||||.||++|||+
T Consensus 509 ~~~~~~~~~~--~~-----~pI~v~dl~~~i~~~~~~~~~~F~~Eyesl~~~-~~~~~~s~~~en~~KNRY~nilayD~s 580 (1087)
T KOG4228|consen 509 KKPVLLRRLN--TP-----GPIPVADLLEHIERRKADDGYGFKQEYESLPEG-QFTWEHSNKKENKQKNRYENILAYDHS 580 (1087)
T ss_pred cchhhhhccC--CC-----CCccHHHHHHHHHHhhcccccchHHHHhhcccc-CCccccCccccccccccCCcchhhhcc
Confidence 3455555554 33 389999999999999999999999999999998 889999999999999999999999999
Q ss_pred ceEecCCCCCCCCCeEEeeecCCCCCcccEEEeCCCCcCCHHHHHHHHHHcCCcEEEEcccccccCcccccccCCCCCCc
Q psy8773 257 RVILSTVDGIPGSDYINANYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRGTE 336 (1773)
Q Consensus 257 RV~L~~~~~~~~sDYINANyI~G~~~~~kyIaTQgPl~~Tv~DFWrMVWEq~v~iIVMLT~l~E~gr~KC~qYWP~~~~~ 336 (1773)
||+|..++|++++|||||||||||..+++|||||||+++|++|||||||||++.+|||+|+++|.++.||.+||| .+++
T Consensus 581 RV~L~~i~Gd~~sDYINAnyIdGy~e~n~yIaaQgP~~eTv~DFWRMVWEq~S~~IVMvTnl~E~~r~kC~qYWP-~~t~ 659 (1087)
T KOG4228|consen 581 RVILPPIEGDPNSDYINANYIDGYKEPNAYIAAQGPRPETVGDFWRMVWEQKSAGIVMVTNLEEFSRVKCAQYWP-EGTE 659 (1087)
T ss_pred eeeecccCCCccccceeeeeeecccccccceeccCCcccchHHHHHHheeccCCcEEEEecccccccccccccCC-CCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999 7889
Q ss_pred eeeeEEEEEEEEEEecceEEEEEEEeeCCCCceEEEEEEEecCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCC
Q psy8773 337 TYGHITVTLQDVQELASYCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNL 416 (1773)
Q Consensus 337 ~yG~~~Vt~~~~~~~~~y~iRtf~I~~~~~~esR~V~hfhYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~ 416 (1773)
+||++.|++.+....++|++|+|.|.+.+....|.|+||||++|||||+|+++..+|.|+++|+..++..
T Consensus 660 ~yGdi~V~~~~~~~~a~y~iRtf~l~~~g~~~~R~v~qfhFt~Wpd~gvPe~~t~lL~f~rrvk~~~p~~---------- 729 (1087)
T KOG4228|consen 660 TYGDIKVTLVQTKPLAEYGIRTFALKKQGENPKREVRQFHFTAWPDHGVPETPTGLLKFRRRVKTFNPPD---------- 729 (1087)
T ss_pred ccccccccceeeeeeccceEEeeeccccCCCCCceeeeeeeccCCCCCCcccchHHHHHHHHhccCCCcC----------
Confidence 9999999999999999999999999998888899999999999999999999999999999999988654
Q ss_pred CCCCEEEEcCCCCCCceeehhHHHHHHHHhcCCccCHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHcCCccccccc
Q psy8773 417 PVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVLCGNTEIPARS 496 (1773)
Q Consensus 417 ~~gPIVVHCSAGVGRTGtFIaID~ll~~l~~e~~VdV~~iV~~LR~qR~~mVQT~eQY~FIy~aLlE~i~~g~tei~~~~ 496 (1773)
.||||||||||+||||+||+||+|++++++++.+||++.|..||.||++||||++||+|||+||+|+.+||+|++++.+
T Consensus 730 -aGPiVVHCSAGvGRTG~fi~iDaml~~~~~e~~vdiy~~v~~lR~QR~~mVQt~eQYiFi~~AllE~~~~G~T~i~~~~ 808 (1087)
T KOG4228|consen 730 -AGPIVVHCSAGVGRTGCFIVIDAMLDRLECEGKVDIYGHVKTLRRQRNNMVQTEEQYIFIHEALLEACLCGDTEVPAST 808 (1087)
T ss_pred -CCCEEEECCCCCCCcceEEEeHHHHHHHHhhCccceechhHHHHhccccccccHHHHHHHHHHHHHHHhcCCccccHHH
Confidence 6999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHhhcccCCCCCchhHHHHHHhcccCCCCccccccCCCccccCCcccccccccCccccccccCCCCccccccccc
Q psy8773 497 LHVHIQKLMSMEVGDTSTGMELEFKKLSNIRAEPSRFISASLPCNKHKNRLVHILPVESSRVCLTPVRGDGFIDFIGQVH 576 (1773)
Q Consensus 497 l~~~i~~L~~~~~~~~~tg~e~EFk~L~~~~~~~~~~~~a~~p~N~~KNR~~~ilP~~~~~v~l~p~~~~~~~~~~~~~~ 576 (1773)
|+.+++.|..++++.++++|++||++|+..+.....+..|+
T Consensus 809 ~~~~~~~l~~~~p~~~~t~le~EF~~L~~~~~~~~~~~~~~--------------------------------------- 849 (1087)
T KOG4228|consen 809 LAPYSQKLKRIDPPENKTGLEEEFKTLNSCKPRTRMMICGN--------------------------------------- 849 (1087)
T ss_pred HHHHHHHhccCCCCCCCcchHHHHHHHhhccccchhhhccc---------------------------------------
Confidence 99999999999999999999999999986554333333333
Q ss_pred ccccccCCCCCceecccchhhhhhcccccccccccccccccccCCccccccchhhhhhhhccccccccccccceeeeccc
Q psy8773 577 KTKEQFGQDGPITVHCSRLAQHIENLKANDNLKFSQEYESIEPGQQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVD 656 (1773)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~n~~~~~~~~~~~~~~~s~~~ 656 (1773)
T Consensus 850 -------------------------------------------------------------------------------- 849 (1087)
T KOG4228|consen 850 -------------------------------------------------------------------------------- 849 (1087)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeccccccccccCCCCCeeEeccCCCcccchhhhhhHHHhhhcccccchhHHHHHHHHhcCCcccccccC
Q psy8773 657 GIPGRDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRILRTQRPAMVQTESI 736 (1773)
Q Consensus 657 ~~p~~~~~~d~~~~~~~~~~~~~~~~pi~V~Cs~gvg~sg~f~tls~vl~~~~~~~~~~~~~~~~~lr~~~~~~~~~e~~ 736 (1773)
T Consensus 850 -------------------------------------------------------------------------------- 849 (1087)
T KOG4228|consen 850 -------------------------------------------------------------------------------- 849 (1087)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcccccchhhhhhcccccccccccCCceeEeeccCCCCCCCceeeEeccCcCCCCceEEecCCCCCChhhhhhhee
Q psy8773 737 EPGQQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINANYCDGYRKHNAYVATQGPLQETLGDFWRMVW 816 (1773)
Q Consensus 737 ~~~~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~Ls~~~g~~~sDYINASyIdGy~~~~~yIaTQgPL~~Tv~DFWrMVw 816 (1773)
.++|+.|||+.+|+|||++||.|.+..|. ++||||||+||||..++.|||||+||.+|++|||||||
T Consensus 850 ------------l~~N~~KNR~~~i~P~d~~rv~L~~~~G~-~sdYINAs~idgy~~~~~fivtq~PL~~T~~DFWrmi~ 916 (1087)
T KOG4228|consen 850 ------------LPENKSKNRQVNILPYDRNRVILIPTHGE-SSDYINASFIDGYRQPKAFIVTQGPLAETVEDFWRMIW 916 (1087)
T ss_pred ------------cchhcccccccccCCchhcccceeccCCC-cccccchhhhcccCCcceEEEecCCcccchHHHHHHhh
Confidence 34566666666677777777777666665 78999999999999999999999999999999999999
Q ss_pred ecCCcEEEEccCcccccccccccccCCCCceeeecEEEEEEEEEeecCEEEEEEEEEeCCCCceeEEEEEEeCCCCCCCC
Q psy8773 817 ELRSVTIVMMTKLEERTRIKCDQYWPSRGTETYGHITVTLQDVQELASYCIRTFMINKGADSERREIKQLQFTAWPDHGV 896 (1773)
Q Consensus 817 E~~v~vIVMLt~l~E~gk~KC~qYWP~~~~~~yG~~tVtl~~~~~~~~yiiRtl~V~~~~~~~~R~V~hfhyt~WPD~gV 896 (1773)
|++|.+||||+++.+. ++|.||||.++...||.+.|+.........++.|.|.|++...+..|+|.||||++||..+.
T Consensus 917 d~~~tsiVmL~~l~~~--~~C~qyw~~~g~~~yg~i~Ve~~~~~~~~~~t~r~f~i~n~~~~~~r~v~qfq~~~WP~~~~ 994 (1087)
T KOG4228|consen 917 DQNVTSIVMLTELKHP--EKCPQYWPPEGSQRYGPIEVEDMNEHINPQYTAREFGVTNEREKQSRTVRQFQFTGWPEYGK 994 (1087)
T ss_pred ccceeEEEEecccCcc--cccccccCCcCceecCcEEEEecccccchhhhhhhheeeeccccCceEEEEEEecCCcccCc
Confidence 9999999999999987 89999999999999999999999999999999999999999899999999999999999887
Q ss_pred CCCChh-HHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHHHHHhhCCCcchHHHHHHHHhcc
Q psy8773 897 PEHPAP-FLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQR 975 (1773)
Q Consensus 897 P~s~~~-lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~VDVf~~Vk~LR~QR 975 (1773)
|..... +..+...+++++... ..+|++|||++|+||||+|||+.+++++++.++.||||++|+.||.+|
T Consensus 995 ~p~~~~~~~~i~~~~~~~q~~~----------~~~P~~Vhc~nG~~rsg~f~ai~~l~e~~~~e~~vDVfq~vk~Lr~~r 1064 (1087)
T KOG4228|consen 995 PPQSKGPISKIPSVASKWQQLG----------ADGPIIVHCLNGVGRTGTFCAISILLERMRKEGVVDVFQTVKTLRFQR 1064 (1087)
T ss_pred CCCCcchhhhHHHHHHHHHhhc----------CCCCEEEEEcCCCcceeehHHHHHHHHHHhhcCceeeehhhhhhhhcC
Confidence 765554 444445555544322 268999999999999999999999999999999999999999999999
Q ss_pred ccccCChhhhhhHHHHHHHHHH
Q psy8773 976 NYMVQTEDQYMFIHDALLEAVL 997 (1773)
Q Consensus 976 ~~mVQT~eQY~FiY~aLlEyl~ 997 (1773)
++||++.+||.|||+++++|+.
T Consensus 1065 p~mv~t~~QY~fcYdv~~~y~~ 1086 (1087)
T KOG4228|consen 1065 PGMVDTSDQYQFCYDVALEYLG 1086 (1087)
T ss_pred ccccCcHHHHHHHHHHHHHhhc
Confidence 9999999999999999999975
No 3
>PHA02740 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=1.1e-65 Score=600.32 Aligned_cols=278 Identities=17% Similarity=0.327 Sum_probs=246.2
Q ss_pred CCccHHHHHHHHHHHhhCCchhHHHHHhhcCCC-CcccccccccccccccCC--CCCCCCCCCcceEecCCCCCCCCCeE
Q psy8773 196 PPIPISRLAQHIENLKANDNLKFSQEYESIEPG-QQFTWDHSSMEMNKAKNR--YANVIAYDHSRVILSTVDGIPGSDYI 272 (1773)
Q Consensus 196 ~pi~~~~~~~~v~~l~a~~~~~f~~Efe~I~~~-~~~t~~~s~~~~N~~KNR--Y~nIlpyD~SRV~L~~~~~~~~sDYI 272 (1773)
++++.++|.+++++.... ..+.+||++|... ...++..+..++|+.||| |.||+|||||||+|+. ++|||
T Consensus 7 ~~~~~~~f~~~~~~~~~~--~~i~~E~~~i~~~~~~~~~~~~~~~~n~~knr~r~~~i~~~D~sRV~L~~-----~~~YI 79 (298)
T PHA02740 7 VDINGMDFINFINKPDLL--SCIIKEYRAIVPEHEDEANKACAQAENKAKDENLALHITRLLHRRIKLFN-----DEKVL 79 (298)
T ss_pred cccCHHHHHHHHhCCCHH--HHHHHHHHHHhccCccchhhhhhchhhhcccccccCCcCCccCceEEecC-----CCCcE
Confidence 568999999999886443 4889999999854 357889999999999996 6899999999999964 46899
Q ss_pred EeeecCCCCCcccEEEeCCCCcCCHHHHHHHHHHcCCcEEEEcccccccCccccc-ccCCCCCC--ceeeeEEEEEEEEE
Q psy8773 273 NANYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCD-QYWPSRGT--ETYGHITVTLQDVQ 349 (1773)
Q Consensus 273 NANyI~G~~~~~kyIaTQgPl~~Tv~DFWrMVWEq~v~iIVMLT~l~E~gr~KC~-qYWP~~~~--~~yG~~~Vt~~~~~ 349 (1773)
|||||+||+.+++|||||||+++|++|||+||||++|.+|||||+..| .||. +|||.+.+ ..||+|+|++.++.
T Consensus 80 NAnyVdG~~~~~~fIaTQ~Pl~~T~~dFW~MVwe~~~~iIVMLt~~~e---~kc~~~YWP~~~~~~~~~g~f~V~~~~~~ 156 (298)
T PHA02740 80 DARFVDGYDFEQKFICIINLCEDACDKFLQALSDNKVQIIVLISRHAD---KKCFNQFWSLKEGCVITSDKFQIETLEII 156 (298)
T ss_pred EEEEecCCCCCCcEEEecCCchhhHHHHHHHHHhcCCCEEEEcccccc---ccccccCCCCCCCCeEEECCEEEEEEEEE
Confidence 999999999999999999999999999999999999999999999987 3799 99998543 47999999999999
Q ss_pred EecceEEEEEEEeeCCCCceEEEEEEEecCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCC
Q psy8773 350 ELASYCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGV 429 (1773)
Q Consensus 350 ~~~~y~iRtf~I~~~~~~esR~V~hfhYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGV 429 (1773)
...+|++|.|.|++. .+++|.|+||||++|||+|+|.++..|++|++.|++......... .....||||||||||+
T Consensus 157 ~~~~~~~~~l~l~~~-~~~~r~V~Hfqyt~WPd~gvP~~~~~~l~fi~~V~~~~~~~~~~~---~~~~~~PIVVHCSaGv 232 (298)
T PHA02740 157 IKPHFNLTLLSLTDK-FGQAQKISHFQYTAWPADGFSHDPDAFIDFFCNIDDLCADLEKHK---ADGKIAPIIIDCIDGI 232 (298)
T ss_pred ecCCEEEEEEEEEcC-CCCcEEEEEEeecCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHhh---ccCCCCCEEEECCCCC
Confidence 899999999999874 577899999999999999999999999999999986532110000 0112589999999999
Q ss_pred CCceeehhHHHHHHHHhcCCccCHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHc
Q psy8773 430 GRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVLC 487 (1773)
Q Consensus 430 GRTGtFIaID~ll~~l~~e~~VdV~~iV~~LR~qR~~mVQT~eQY~FIy~aLlE~i~~ 487 (1773)
||||||||+|++++++.+++.|||+++|.+||+||++||||.+||.|||++|++++..
T Consensus 233 GRTGtFcaiDi~l~~~~~~~~vdi~~~V~~lR~qR~~~Vqt~~QY~F~y~~l~~yl~~ 290 (298)
T PHA02740 233 SSSAVFCVFDICATEFDKTGMLSIANALKKVRQKKYGCMNCLDDYVFCYHLIAAYLKE 290 (298)
T ss_pred chhHHHHHHHHHHHHHHhcCcccHHHHHHHHHhhCccccCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999874
No 4
>PHA02742 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=2.3e-65 Score=600.18 Aligned_cols=287 Identities=29% Similarity=0.497 Sum_probs=249.8
Q ss_pred Ccc-HHHHHHHHHHHhhCCchhHHHHHhhcCC-CCcccccccccccccccCCCCCCCCCCCcceEecCCCCCCCCCeEEe
Q psy8773 197 PIP-ISRLAQHIENLKANDNLKFSQEYESIEP-GQQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINA 274 (1773)
Q Consensus 197 pi~-~~~~~~~v~~l~a~~~~~f~~Efe~I~~-~~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~L~~~~~~~~sDYINA 274 (1773)
+.. ..+|.+.+++. |-...+.+||+.|.. ....++..+..++|..||||.||+|||||||+|+..++ ++|||||
T Consensus 8 ~~~~~~~~~~~~~~~--~~~~~i~~E~~~i~~~~~~~~~~~~~~~~N~~KNRy~~i~~~D~tRV~L~~~~~--~~dYINA 83 (303)
T PHA02742 8 KNSFAKNCEQLIEES--NLAEILKEEHEHIMQEIVAFSCNESLELKNMKKCRYPDAPCFDRNRVILKIEDG--GDDFINA 83 (303)
T ss_pred ccCcHHHHHHHHhcC--CHHHHHHHHHHHHhcCCCCCchhhccChhhhhcCCCCCCCCCCCCEEEeCCCCC--CCCcEEE
Confidence 355 56666655543 233356789999975 34678888899999999999999999999999987554 6899999
Q ss_pred eecCCCCCcccEEEeCCCCcCCHHHHHHHHHHcCCcEEEEcccccccCcccccccCCCC--CCceeeeEEEEEEEEEEec
Q psy8773 275 NYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSR--GTETYGHITVTLQDVQELA 352 (1773)
Q Consensus 275 NyI~G~~~~~kyIaTQgPl~~Tv~DFWrMVWEq~v~iIVMLT~l~E~gr~KC~qYWP~~--~~~~yG~~~Vt~~~~~~~~ 352 (1773)
|||+|++.+++|||||||+++|++|||+||||++|.+|||||++.|+|+.||++|||.+ +...||.|+|++.+++...
T Consensus 84 syI~g~~~~~~fIatQ~Pl~~T~~dFW~MVw~~~~~vIVmLt~~~E~g~~kc~~YWp~~~~~~~~~g~~~V~~~~~~~~~ 163 (303)
T PHA02742 84 SYVDGHNAKGRFICTQAPLEETALDFWQAIFQDQVRVIVMITKIMEDGKEACYPYWMPHERGKATHGEFKIKTKKIKSFR 163 (303)
T ss_pred eeecCCCCCCeEEEECCCCcccHHHHHHHHhhcCCCeEEEcchhhhCCeeeccccCCCCCCCceEEEEEEEEEEEEEEcC
Confidence 99999998999999999999999999999999999999999999999999999999964 3457999999999999999
Q ss_pred ceEEEEEEEeeCCCCceEEEEEEEecCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCc
Q psy8773 353 SYCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRT 432 (1773)
Q Consensus 353 ~y~iRtf~I~~~~~~esR~V~hfhYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRT 432 (1773)
+|++|+|.|.+...+++|.|+||||++|||+|+|.++..|++|++.|+..................+|||||||||+|||
T Consensus 164 ~~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~~~~~~~~~~~~PIvVHCsaGvGRT 243 (303)
T PHA02742 164 NYAVTNLCLTDTNTGASLDIKHFAYEDWPHGGLPRDPNKFLDFVLAVREADLKADVDIKGENIVKEPPILVHCSAGLDRA 243 (303)
T ss_pred CEEEEEEEEEECCCCceEEEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHhhhccccccccccCCCCCeEEECCCCCchh
Confidence 99999999998777889999999999999999999999999999999875322111000001112479999999999999
Q ss_pred eeehhHHHHHHHHhcCCccCHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHc
Q psy8773 433 GCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVLC 487 (1773)
Q Consensus 433 GtFIaID~ll~~l~~e~~VdV~~iV~~LR~qR~~mVQT~eQY~FIy~aLlE~i~~ 487 (1773)
|||||+|++++++..++.+||+++|..||+||++||||.+||.|||++|++|+..
T Consensus 244 GtF~aid~~i~~~~~~~~v~v~~~V~~lR~qR~~~Vqt~~QY~F~y~~l~~y~~~ 298 (303)
T PHA02742 244 GAFCAIDICISKYNERAIIPLLSIVRDLRKQRHNCLSLPQQYIFCYFIVLIFAKL 298 (303)
T ss_pred HHHHHHHHHHHHHHhcCCCCHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999874
No 5
>PHA02747 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=1.2e-63 Score=587.58 Aligned_cols=288 Identities=27% Similarity=0.458 Sum_probs=252.0
Q ss_pred CCccHHHHHHHHHHHhhCCchhHHHHHhhcCCC-CcccccccccccccccCCCCCCCCCCCcceEecCCCCCCCCCeEEe
Q psy8773 196 PPIPISRLAQHIENLKANDNLKFSQEYESIEPG-QQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINA 274 (1773)
Q Consensus 196 ~pi~~~~~~~~v~~l~a~~~~~f~~Efe~I~~~-~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~L~~~~~~~~sDYINA 274 (1773)
.++..++|.+++++....+ .+.+||+.|... ...++.++..++|+.||||.||+|||||||+|...++ ..+|||||
T Consensus 7 ~~~~~~~f~~~~~~~~~~~--~i~~E~~~i~~~~~~~~~~~~~~~~N~~kNRy~di~p~D~sRV~L~~~~~-~~~dYINA 83 (312)
T PHA02747 7 AECRAIDFLKRRNQLNCFG--IIRDEHHQIILKPFDGLIANFEKPENQPKNRYWDIPCWDHNRVILDSGGG-STSDYIHA 83 (312)
T ss_pred cccCHHHHHHHHhCCCHHH--HHHHHHHHHhcCCCCChhhhhhCchhhccCCCCCCCCCCCCEeEecCCCC-CCCCcEEe
Confidence 4578888988888765433 578999999743 3557788889999999999999999999999987654 46899999
Q ss_pred eecCCCCCcccEEEeCCCCcCCHHHHHHHHHHcCCcEEEEccccc-ccCcccccccCCCC--CCceeeeEEEEEEEEEEe
Q psy8773 275 NYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLE-ERTRIKCDQYWPSR--GTETYGHITVTLQDVQEL 351 (1773)
Q Consensus 275 NyI~G~~~~~kyIaTQgPl~~Tv~DFWrMVWEq~v~iIVMLT~l~-E~gr~KC~qYWP~~--~~~~yG~~~Vt~~~~~~~ 351 (1773)
|||+||..+++|||||||+++|++|||+||||++|.+|||||.+. |+|+.||++|||.+ +...||+|.|++.++...
T Consensus 84 syV~g~~~~~~yIaTQ~Pl~~T~~dFW~MVwe~~~~~IVMLt~~~~e~g~~kc~~YWp~~~~~~~~~g~~~V~~~~~~~~ 163 (312)
T PHA02747 84 NWIDGFEDDKKFIATQGPFAETCADFWKAVWQEHCSIIVMLTPTKGTNGEEKCYQYWCLNEDGNIDMEDFRIETLKTSVR 163 (312)
T ss_pred eeecCCCCCCeEEEeCCCcchhHHHHHHHHHhccCCEEEEcccccccCCcccccccCCCCCCCCeEeeeEEEEEEEEEec
Confidence 999999999999999999999999999999999999999999999 89999999999975 345799999999999999
Q ss_pred cceEEEEEEEeeCCCCceEEEEEEEecCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCC
Q psy8773 352 ASYCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGR 431 (1773)
Q Consensus 352 ~~y~iRtf~I~~~~~~esR~V~hfhYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGR 431 (1773)
.+|++|+|.|+....+++|.|+||||++|||+|+|.++..|++|++.|+..+......... .+...+|||||||||+||
T Consensus 164 ~~~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~~~P~~~~~~l~fi~~v~~~~~~~~~~~~~-~~~~~~PIvVHCsaGvGR 242 (312)
T PHA02747 164 AKYILTLIEITDKILKDSRKISHFQCSEWFEDETPSDHPDFIKFIKIIDINRKKSGKLFNP-KDALLCPIVVHCSDGVGK 242 (312)
T ss_pred CCeEEEEEEEEECCCCCceEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHHHHhhccccc-cccCCCCEEEEecCCCcc
Confidence 9999999999987778899999999999999999999999999998887654321110000 011247999999999999
Q ss_pred ceeehhHHHHHHHHhcCCccCHHHHHHHHHHhcccCCCCHHHHHHH---HHHHHHHHHc
Q psy8773 432 TGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFI---HDALLEAVLC 487 (1773)
Q Consensus 432 TGtFIaID~ll~~l~~e~~VdV~~iV~~LR~qR~~mVQT~eQY~FI---y~aLlE~i~~ 487 (1773)
||||||+|++++++..++.+||+++|..||+||++||||.+||.|| |++|++++..
T Consensus 243 tGtfcaidi~i~~l~~~~~v~v~~~V~~lR~qR~~~Vqt~~QY~F~~~~Y~~l~~~~~~ 301 (312)
T PHA02747 243 TGIFCAVDICLNQLVKRKAICLAKTAEKIREQRHAGIMNFDDYLFIQPGYEVLHYFLSK 301 (312)
T ss_pred hhHHHHHHHHHHHHHhcCCCCHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 9998888764
No 6
>PHA02742 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=2.1e-63 Score=583.67 Aligned_cols=284 Identities=27% Similarity=0.495 Sum_probs=241.9
Q ss_pred hHHHhhhcccccchhHH-HHHHHHhcCCcccccccCCCCCCcccccchhhhhhcccccccccccCCceeEeeccCCCCCC
Q psy8773 702 SIVLERMQYEGVIDLFQ-TVRILRTQRPAMVQTESIEPGQQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGS 780 (1773)
Q Consensus 702 s~vl~~~~~~~~~~~~~-~~~~lr~~~~~~~~~e~~~~~~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~Ls~~~g~~~s 780 (1773)
..+++++..-...+..+ ++..+... ....++..+..++|..||||.||+|||+|||+|+..++ ++
T Consensus 13 ~~~~~~~~~~~~~~~i~~E~~~i~~~------------~~~~~~~~~~~~~N~~KNRy~~i~~~D~tRV~L~~~~~--~~ 78 (303)
T PHA02742 13 KNCEQLIEESNLAEILKEEHEHIMQE------------IVAFSCNESLELKNMKKCRYPDAPCFDRNRVILKIEDG--GD 78 (303)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHhcC------------CCCCchhhccChhhhhcCCCCCCCCCCCCEEEeCCCCC--CC
Confidence 45566665555554444 44433221 11245677888999999999999999999999987554 68
Q ss_pred CceeeEeccCcCCCCceEEecCCCCCChhhhhhheeecCCcEEEEccCcccccccccccccCCC--CceeeecEEEEEEE
Q psy8773 781 DYINANYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSR--GTETYGHITVTLQD 858 (1773)
Q Consensus 781 DYINASyIdGy~~~~~yIaTQgPL~~Tv~DFWrMVwE~~v~vIVMLt~l~E~gk~KC~qYWP~~--~~~~yG~~tVtl~~ 858 (1773)
||||||||+|+..+++|||||||+++|++|||+||||+++.+|||||++.|.|+.||++|||.+ +...||.|+|++.+
T Consensus 79 dYINAsyI~g~~~~~~fIatQ~Pl~~T~~dFW~MVw~~~~~vIVmLt~~~E~g~~kc~~YWp~~~~~~~~~g~~~V~~~~ 158 (303)
T PHA02742 79 DFINASYVDGHNAKGRFICTQAPLEETALDFWQAIFQDQVRVIVMITKIMEDGKEACYPYWMPHERGKATHGEFKIKTKK 158 (303)
T ss_pred CcEEEeeecCCCCCCeEEEECCCCcccHHHHHHHHhhcCCCeEEEcchhhhCCeeeccccCCCCCCCceEEEEEEEEEEE
Confidence 9999999999998999999999999999999999999999999999999999999999999964 34689999999999
Q ss_pred EEeecCEEEEEEEEEeCCCCceeEEEEEEeCCCCCCCCCCCChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCC
Q psy8773 859 VQELASYCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSA 938 (1773)
Q Consensus 859 ~~~~~~yiiRtl~V~~~~~~~~R~V~hfhyt~WPD~gVP~s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSa 938 (1773)
+....+|++|+|.|.+...+++|.|+||||++|||+|+|.++..||+|+..|+..+...............+||||||||
T Consensus 159 ~~~~~~~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~~~~~~~~~~~~PIvVHCsa 238 (303)
T PHA02742 159 IKSFRNYAVTNLCLTDTNTGASLDIKHFAYEDWPHGGLPRDPNKFLDFVLAVREADLKADVDIKGENIVKEPPILVHCSA 238 (303)
T ss_pred EEEcCCEEEEEEEEEECCCCceEEEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHhhhccccccccccCCCCCeEEECCC
Confidence 99889999999999997778899999999999999999999999999999998753221100000011125899999999
Q ss_pred CCccchhHhHHHHHHHHHhhCCCcchHHHHHHHHhccccccCChhhhhhHHHHHHHHHHcC
Q psy8773 939 GVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVLCG 999 (1773)
Q Consensus 939 GVGRTGtFIAId~lLeql~~e~~VDVf~~Vk~LR~QR~~mVQT~eQY~FiY~aLlEyl~~g 999 (1773)
|+||||||||+|++++++..++.+||+++|+.||+||++||||.+||.|||++|++|+..-
T Consensus 239 GvGRTGtF~aid~~i~~~~~~~~v~v~~~V~~lR~qR~~~Vqt~~QY~F~y~~l~~y~~~~ 299 (303)
T PHA02742 239 GLDRAGAFCAIDICISKYNERAIIPLLSIVRDLRKQRHNCLSLPQQYIFCYFIVLIFAKLM 299 (303)
T ss_pred CCchhHHHHHHHHHHHHHHhcCCCCHHHHHHHHHhhcccccCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999754
No 7
>PHA02746 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=4.5e-63 Score=585.10 Aligned_cols=287 Identities=28% Similarity=0.479 Sum_probs=245.1
Q ss_pred ccHHHHHHHHHHHhhCCchhHHHHHhhcCCC-CcccccccccccccccCCCCCCCCCCCcceEecCCC------------
Q psy8773 198 IPISRLAQHIENLKANDNLKFSQEYESIEPG-QQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVD------------ 264 (1773)
Q Consensus 198 i~~~~~~~~v~~l~a~~~~~f~~Efe~I~~~-~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~L~~~~------------ 264 (1773)
....+|.+...+ .|-.....+||.+|... ...++.++..++|+.||||.||+|||||||+|+...
T Consensus 9 ~~~~~~~~~~~~--~~~~~~~~~e~~~i~~~~~~~t~~~~~~~~N~~KNRy~di~p~D~sRV~L~~~~~~~~~~~~~~~~ 86 (323)
T PHA02746 9 FNAFDFFDKTNH--AKFCEFVLLEHAEVMDIPIRGTTNHFLKKENLKKNRFHDIPCWDHSRVVINAHESLKMFDVGDSDG 86 (323)
T ss_pred CCHHHHHHHhcC--CCHHHHHHHHHHHHhcCCCCcchhhccChhhccccCCCCCCCCcCCEEEecCCCCccccccccccc
Confidence 445555443332 23334567899999854 356888889999999999999999999999998743
Q ss_pred -------CCCCCCeEEeeecCCCCCcccEEEeCCCCcCCHHHHHHHHHHcCCcEEEEcccccccCcccccccCCCCC--C
Q psy8773 265 -------GIPGSDYINANYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRG--T 335 (1773)
Q Consensus 265 -------~~~~sDYINANyI~G~~~~~kyIaTQgPl~~Tv~DFWrMVWEq~v~iIVMLT~l~E~gr~KC~qYWP~~~--~ 335 (1773)
+.+++||||||||+|+..+++|||||||+++|++|||+||||+++.+|||||+++| ++.||++|||.+. .
T Consensus 87 ~~~~~~~~~~~~dYINAsyV~g~~~~~~fIaTQ~Pl~~T~~dFW~MIwe~~v~vIVMLt~~~e-~~~kc~~YWP~~~~~~ 165 (323)
T PHA02746 87 KKIEVTSEDNAENYIHANFVDGFKEANKFICAQGPKEDTSEDFFKLISEHESQVIVSLTDIDD-DDEKCFELWTKEEDSE 165 (323)
T ss_pred cccccccCCCCCCeEEEecccCCCCCCeEEEeCCCChhhHHHHHHHHHhhCCCEEEEeccccc-CCccCCCCCCCCCCCC
Confidence 23458999999999999999999999999999999999999999999999999854 6789999999863 3
Q ss_pred ceeeeEEEEEEEEEEecceEEEEEEEeeCCCCceEEEEEEEecCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCC
Q psy8773 336 ETYGHITVTLQDVQELASYCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVN 415 (1773)
Q Consensus 336 ~~yG~~~Vt~~~~~~~~~y~iRtf~I~~~~~~esR~V~hfhYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~ 415 (1773)
..||.|.|++.+.....+|+.|.|.+.+...++.|.|+||||++|||+|+|.++..|++|++.|+............ ..
T Consensus 166 ~~~g~~~V~~~~~~~~~~~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~~~~~-~~ 244 (323)
T PHA02746 166 LAFGRFVAKILDIIEELSFTKTRLMITDKISDTSREIHHFWFPDWPDNGIPTGMAEFLELINKVNEEQAELIKQADN-DP 244 (323)
T ss_pred eEEcCEEEEEEEEEEcCCeEEEEEEEEECCCCCceEEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHhhhhcc-CC
Confidence 57999999999988888999999999987778899999999999999999999999999999998764211000000 00
Q ss_pred CCCCCEEEEcCCCCCCceeehhHHHHHHHHhcCCccCHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHcC
Q psy8773 416 LPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVLCG 488 (1773)
Q Consensus 416 ~~~gPIVVHCSAGVGRTGtFIaID~ll~~l~~e~~VdV~~iV~~LR~qR~~mVQT~eQY~FIy~aLlE~i~~g 488 (1773)
...+|||||||||+||||||||+|+++++++.++.+||+++|..||+||++||||.+||.|||++|.+++...
T Consensus 245 ~~~~PIvVHCsaGvGRTGtfcaid~~l~~l~~~~~vdv~~~V~~lR~qR~~~Vqt~~QY~F~y~~l~~~l~~~ 317 (323)
T PHA02746 245 QTLGPIVVHCSAGIGRAGTFCAIDNALEQLEKEKEVCLGEIVLKIRKQRHSSVFLPEQYAFCYKALKYAIIEE 317 (323)
T ss_pred CCCCCEEEEcCCCCCcchhHHHHHHHHHHHHhcCCCCHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHh
Confidence 1147999999999999999999999999999999999999999999999999999999999999999998754
No 8
>KOG0790|consensus
Probab=100.00 E-value=6.3e-65 Score=583.78 Aligned_cols=331 Identities=39% Similarity=0.638 Sum_probs=277.8
Q ss_pred ceecccc--ccccccCCCC---CeeEeccCC---CcccchhhhhhHHHhhhcccccchhHHHHHHHHhcCCccc------
Q psy8773 666 DFIGQVH--KTKEQFGQDG---PITVHCSAG---VGRTGVFITLSIVLERMQYEGVIDLFQTVRILRTQRPAMV------ 731 (1773)
Q Consensus 666 d~~~~~~--~~~~~~~~~~---pi~V~Cs~g---vg~sg~f~tls~vl~~~~~~~~~~~~~~~~~lr~~~~~~~------ 731 (1773)
||+.++. +-.++.++.+ -+|++|.+| ||+...|.+|.+++++++.+++.+..+.+..|++...+..
T Consensus 146 dfVlSvrTdd~~~~~~~~~kVtHvmI~~q~~kydVGgge~F~sltdLidhykknpmvEt~gtvv~LrqP~naTrI~Aa~i 225 (600)
T KOG0790|consen 146 DFVLSVRTDDKKESNDSKLKVTHVMIRCQEGKYDVGGGERFDSLTDLVEHYKKNPMVETLGTVVYLRQPLNATRINAADI 225 (600)
T ss_pred ceEEEEEcCCcccCCCCccceEEEEEEecccccccCCccccchHHHHHHHhccCchhhhcceeEEeeccccccchhhhhH
Confidence 5555554 3334433322 389999999 9999999999999999999999998888887776433210
Q ss_pred ----------------c----cccCCCCCC------cccccchhhhhhcccccccccccCCceeEeecc-CCCCCCCcee
Q psy8773 732 ----------------Q----TESIEPGQQ------FTWDHSSMEMNKAKNRYANVIAYDHSRVILSTV-DGIPGSDYIN 784 (1773)
Q Consensus 732 ----------------~----~e~~~~~~~------~t~~~s~~~~N~~KNRY~nIlpyD~SRV~Ls~~-~g~~~sDYIN 784 (1773)
. .|.|+..++ ++......++|+.||||+||+||||+||+|... ++.+++||||
T Consensus 226 ~~Rve~l~k~~e~~d~~k~GfwEEFesLqq~~~~~~~sr~EG~r~eN~~KNRYkNIlPfDHtRViL~d~~~n~pgsdYIN 305 (600)
T KOG0790|consen 226 ENRVEELNKKQESEDTAKAGFWEEFESLQQQEVKNLHSRLEGQRPENKGKNRYKNILPFDHTRVILQDRDPNIPGSDYIN 305 (600)
T ss_pred HHHHHHHhccccchhhhhcchhHHHHHhhhhhhHhhhhhhccccchhhccccccccCcccceeeEeecCCCCCccchhcc
Confidence 0 122333232 233345678999999999999999999999876 4678999999
Q ss_pred eEeccC--------cCCCCceEEecCCCCCChhhhhhheeecCCcEEEEccCcccccccccccccCCCCc-eeeecEEEE
Q psy8773 785 ANYCDG--------YRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRGT-ETYGHITVT 855 (1773)
Q Consensus 785 ASyIdG--------y~~~~~yIaTQgPL~~Tv~DFWrMVwE~~v~vIVMLt~l~E~gk~KC~qYWP~~~~-~~yG~~tVt 855 (1773)
||||-- ...++.||||||-|.+|+.|||+||||+|+++|||-|...|.|+.||.+|||+++. +.||.+.|+
T Consensus 306 Anyi~~~~q~~~~~~~~kKsyIAtQGCL~nTVnDFW~MvwQENsrVIVMtTkE~ERgK~KC~~YWPee~~~e~~G~~~v~ 385 (600)
T KOG0790|consen 306 ANYIMIEFQRLCNNSKPKKSYIATQGCLQNTVNDFWRMVWQENSRVIVMTTKEVERGKSKCVKYWPEEGALEEYGVMRVR 385 (600)
T ss_pred cchhhhhhhhccCccccccceeehhhHHHHHHHHHHHHHHhccceEEEEehhhhhcccccccccCCcccchhhcCceEEE
Confidence 999831 12346899999999999999999999999999999999999999999999998764 589999999
Q ss_pred EEEEEeecCEEEEEEEEEeC-CCCceeEEEEEEeCCCCCCCCCCCChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEE
Q psy8773 856 LQDVQELASYCIRTFMINKG-ADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIV 934 (1773)
Q Consensus 856 l~~~~~~~~yiiRtl~V~~~-~~~~~R~V~hfhyt~WPD~gVP~s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVV 934 (1773)
+..+....+|++|+|.++.. .+...|+|+||||..|||||||.+|..+|+|+..|...+... ...|||||
T Consensus 386 ~v~E~~t~dY~LR~l~vs~~~~g~~~R~I~~yh~~tWPDHGvP~dPg~vLnFLe~V~~rq~~l---------~~AgpIvV 456 (600)
T KOG0790|consen 386 NVKESDTHDYTLRELKVSKLGNGNLEREIWHYHYLTWPDHGVPSDPGGVLNFLEEVNHRQESL---------MDAGPIVV 456 (600)
T ss_pred eccccccccceehheeeccccCCcchhhhhhhheeecccCCCcCCccHHHHHHHHhhhhhccc---------cccCcEEE
Confidence 99999999999999999853 345679999999999999999999999999999998765432 13689999
Q ss_pred EcCCCCccchhHhHHHHHHHHHhhC---CCcchHHHHHHHHhccccccCChhhhhhHHHHHHHHHHcCCccccc
Q psy8773 935 HCSAGVGRTGCFIVIDAMIERIKHD---KTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVLCGNTEIPA 1005 (1773)
Q Consensus 935 HCSaGVGRTGtFIAId~lLeql~~e---~~VDVf~~Vk~LR~QR~~mVQT~eQY~FiY~aLlEyl~~g~tei~~ 1005 (1773)
|||||+|||||||+||++|++++.. ..+||..+++.+|.||.|||||+.||.|||.||..||..-...+.+
T Consensus 457 HCSAGIGrTGTfiViD~lld~I~~~Gldc~iDi~ktIqmVRsqRSGmVQTEaQYkFiY~Avqhyietl~~r~e~ 530 (600)
T KOG0790|consen 457 HCSAGIGRTGTFIVIDMLLDQIREKGLDCDIDIQKTIQMVRSQRSGMVQTEAQYKFIYVAVQHYIETLQKRIEE 530 (600)
T ss_pred EccCCcCCcceEEEhHHHHHHHHhcCCCCcccHHHHHHHHHHHhcchhhhHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999876 4789999999999999999999999999999999999877665544
No 9
>KOG0790|consensus
Probab=100.00 E-value=1.7e-63 Score=572.07 Aligned_cols=283 Identities=41% Similarity=0.698 Sum_probs=249.1
Q ss_pred CCccHHHHHHHHHHHhhC------CchhHHHHHhhcCCC---CcccccccccccccccCCCCCCCCCCCcceEecCC-CC
Q psy8773 196 PPIPISRLAQHIENLKAN------DNLKFSQEYESIEPG---QQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTV-DG 265 (1773)
Q Consensus 196 ~pi~~~~~~~~v~~l~a~------~~~~f~~Efe~I~~~---~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~L~~~-~~ 265 (1773)
.-|..+.+...++.+... .-.+|++||++|+.. ..........++|+.||||+||+|||||||+|... .+
T Consensus 218 TrI~Aa~i~~Rve~l~k~~e~~d~~k~GfwEEFesLqq~~~~~~~sr~EG~r~eN~~KNRYkNIlPfDHtRViL~d~~~n 297 (600)
T KOG0790|consen 218 TRINAADIENRVEELNKKQESEDTAKAGFWEEFESLQQQEVKNLHSRLEGQRPENKGKNRYKNILPFDHTRVILQDRDPN 297 (600)
T ss_pred cchhhhhHHHHHHHHhccccchhhhhcchhHHHHHhhhhhhHhhhhhhccccchhhccccccccCcccceeeEeecCCCC
Confidence 348888898888888654 235899999999642 23455567789999999999999999999999986 45
Q ss_pred CCCCCeEEeeecCC------C--CCcccEEEeCCCCcCCHHHHHHHHHHcCCcEEEEcccccccCcccccccCCCCCC-c
Q psy8773 266 IPGSDYINANYCDG------Y--RKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRGT-E 336 (1773)
Q Consensus 266 ~~~sDYINANyI~G------~--~~~~kyIaTQgPl~~Tv~DFWrMVWEq~v~iIVMLT~l~E~gr~KC~qYWP~~~~-~ 336 (1773)
.|++||||||||-- . ..++.||||||=|.+|+.|||+||||+|+++|||.|...|.|+.||.+|||+.+. +
T Consensus 298 ~pgsdYINAnyi~~~~q~~~~~~~~kKsyIAtQGCL~nTVnDFW~MvwQENsrVIVMtTkE~ERgK~KC~~YWPee~~~e 377 (600)
T KOG0790|consen 298 IPGSDYINANYIMIEFQRLCNNSKPKKSYIATQGCLQNTVNDFWRMVWQENSRVIVMTTKEVERGKSKCVKYWPEEGALE 377 (600)
T ss_pred CccchhcccchhhhhhhhccCccccccceeehhhHHHHHHHHHHHHHHhccceEEEEehhhhhcccccccccCCcccchh
Confidence 78999999999842 1 1235799999999999999999999999999999999999999999999998764 6
Q ss_pred eeeeEEEEEEEEEEecceEEEEEEEeeCC-CCceEEEEEEEecCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCC
Q psy8773 337 TYGHITVTLQDVQELASYCIRTFMINKGA-DSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVN 415 (1773)
Q Consensus 337 ~yG~~~Vt~~~~~~~~~y~iRtf~I~~~~-~~esR~V~hfhYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~ 415 (1773)
.||.+.|++.++....+|++|+|.+...+ ....|+|+||||..|||||||.+|..+|.|+..|...+....
T Consensus 378 ~~G~~~v~~v~E~~t~dY~LR~l~vs~~~~g~~~R~I~~yh~~tWPDHGvP~dPg~vLnFLe~V~~rq~~l~-------- 449 (600)
T KOG0790|consen 378 EYGVMRVRNVKESDTHDYTLRELKVSKLGNGNLEREIWHYHYLTWPDHGVPSDPGGVLNFLEEVNHRQESLM-------- 449 (600)
T ss_pred hcCceEEEeccccccccceehheeeccccCCcchhhhhhhheeecccCCCcCCccHHHHHHHHhhhhhcccc--------
Confidence 89999999999999999999999998643 355799999999999999999999999999999987654321
Q ss_pred CCCCCEEEEcCCCCCCceeehhHHHHHHHHhcCC---ccCHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHc
Q psy8773 416 LPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDK---TVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVLC 487 (1773)
Q Consensus 416 ~~~gPIVVHCSAGVGRTGtFIaID~ll~~l~~e~---~VdV~~iV~~LR~qR~~mVQT~eQY~FIy~aLlE~i~~ 487 (1773)
..||||||||||+|||||||+||++|+++...+ .+||..+|+.+|.||.+||||+.||.|||.||..||..
T Consensus 450 -~AgpIvVHCSAGIGrTGTfiViD~lld~I~~~Gldc~iDi~ktIqmVRsqRSGmVQTEaQYkFiY~Avqhyiet 523 (600)
T KOG0790|consen 450 -DAGPIVVHCSAGIGRTGTFIVIDMLLDQIREKGLDCDIDIQKTIQMVRSQRSGMVQTEAQYKFIYVAVQHYIET 523 (600)
T ss_pred -ccCcEEEEccCCcCCcceEEEhHHHHHHHHhcCCCCcccHHHHHHHHHHHhcchhhhHHhHHHHHHHHHHHHHH
Confidence 268999999999999999999999999998775 68999999999999999999999999999999999874
No 10
>PHA02738 hypothetical protein; Provisional
Probab=100.00 E-value=3.6e-62 Score=576.76 Aligned_cols=283 Identities=33% Similarity=0.573 Sum_probs=241.6
Q ss_pred ccHHHHHHHHHHHhhCCc-hhHHHHHhhcCCC-CcccccccccccccccCCCCCCCCCCCcceEecCCCCCCCCCeEEee
Q psy8773 198 IPISRLAQHIENLKANDN-LKFSQEYESIEPG-QQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINAN 275 (1773)
Q Consensus 198 i~~~~~~~~v~~l~a~~~-~~f~~Efe~I~~~-~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~L~~~~~~~~sDYINAN 275 (1773)
...++|.+.++ ..+. ..+.+||+.|... ...++..+. .|+.||||.||+|||++||+|+...+ ++||||||
T Consensus 9 ~~~~~fl~~~~---~~~~~~~i~~E~~~i~~~~~~~t~~~~~--~N~~kNR~~~v~~~d~sRV~L~~~~~--~~dYINAs 81 (320)
T PHA02738 9 LKYAEFLALME---KSDCEEVITREHQKVISEKVDGTFNAEK--KNRKLNRYLDAVCFDHSRVILPAERN--RGDYINAN 81 (320)
T ss_pred CCHHHHHHHHh---CCCHHHHHHHHHHHHhcCCCCcchhHHH--HhhhhCCCCCcCCCcCCEEEeCCCCC--CCCceEeE
Confidence 45555555444 3333 3677899998743 345555443 49999999999999999999986543 58999999
Q ss_pred ecCCCCCcccEEEeCCCCcCCHHHHHHHHHHcCCcEEEEcccccccCcccccccCCCCC--CceeeeEEEEEEEEEEecc
Q psy8773 276 YCDGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRG--TETYGHITVTLQDVQELAS 353 (1773)
Q Consensus 276 yI~G~~~~~kyIaTQgPl~~Tv~DFWrMVWEq~v~iIVMLT~l~E~gr~KC~qYWP~~~--~~~yG~~~Vt~~~~~~~~~ 353 (1773)
||+|+..+++|||||||+++|++|||+||||++|.+|||||+..|.++.||++|||.+. ...||+|+|++.++....+
T Consensus 82 yVdg~~~~~kfI~TQ~Pl~~T~~dFW~MVwe~~v~~IVmL~~~~E~~~~kc~~YWp~~~~~~~~~g~f~V~~~~~~~~~~ 161 (320)
T PHA02738 82 YVDGFEYKKKFICGQAPTRQTCYDFYRMLWMEHVQIIVMLCKKKENGREKCFPYWSDVEQGSIRFGKFKITTTQVETHPH 161 (320)
T ss_pred EecCCCCCceeEEecCCChHHHHHHHHHHHHhCCcEEEEeeehhhCCeeeccccCCCCCCCceEeccEEEEEEEEEecCC
Confidence 99999999999999999999999999999999999999999999999999999999753 4589999999999999999
Q ss_pred eEEEEEEEeeCCCCceEEEEEEEecCCCCCCCCCChHHHHHHHHHHHhhCCCCC--CccCCCCCCCCCCEEEEcCCCCCC
Q psy8773 354 YCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTN--SLESSGVNLPVGPLIVHCSAGVGR 431 (1773)
Q Consensus 354 y~iRtf~I~~~~~~esR~V~hfhYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~--~~~~~~~~~~~gPIVVHCSAGVGR 431 (1773)
|+.|+|.|++. .++.|.|+||||++|||+|+|.++..|++|++.|++...... ...........+|||||||||+||
T Consensus 162 ~~~~~l~l~~~-~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~fi~~V~~~~~~~~~~~~~~~~~~~~~~PIVVHCs~GiGR 240 (320)
T PHA02738 162 YVKSTLLLTDG-TSATQTVTHFNFTAWPDHDVPKNTSEFLNFVLEVRQCQKELAQESLQIGHNRLQPPPIVVHCNAGLGR 240 (320)
T ss_pred eEEEEEEEEeC-CCCcEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHhhhhhcccCccccCCCCeEEEcCCCCCh
Confidence 99999999874 577899999999999999999999999999999987543210 000000111247999999999999
Q ss_pred ceeehhHHHHHHHHhcCCccCHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHcC
Q psy8773 432 TGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVLCG 488 (1773)
Q Consensus 432 TGtFIaID~ll~~l~~e~~VdV~~iV~~LR~qR~~mVQT~eQY~FIy~aLlE~i~~g 488 (1773)
||||||+|++++++..++.+||+++|..||+||++||||.+||.|||++|++++..-
T Consensus 241 tGtFcaidi~i~~~~~~~~vdv~~~V~~lR~qR~~~vqt~~QY~F~y~~l~~y~~~~ 297 (320)
T PHA02738 241 TPCYCVVDISISRFDACATVSIPSIVSSIRNQRYYSLFIPFQYFFCYRAVKRYVNLT 297 (320)
T ss_pred hhhhhHHHHHHHHHHhcCCcCHHHHHHHHHhhhhhccCCHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999998843
No 11
>PHA02740 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=4.3e-62 Score=570.08 Aligned_cols=245 Identities=17% Similarity=0.350 Sum_probs=218.0
Q ss_pred ccccchhhhhhcccc--cccccccCCceeEeeccCCCCCCCceeeEeccCcCCCCceEEecCCCCCChhhhhhheeecCC
Q psy8773 743 TWDHSSMEMNKAKNR--YANVIAYDHSRVILSTVDGIPGSDYINANYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRS 820 (1773)
Q Consensus 743 t~~~s~~~~N~~KNR--Y~nIlpyD~SRV~Ls~~~g~~~sDYINASyIdGy~~~~~yIaTQgPL~~Tv~DFWrMVwE~~v 820 (1773)
++..+..++|+.||| |.||+|||||||+|+. ++|||||||||||..+++|||||||+++|++|||+||||++|
T Consensus 42 ~~~~~~~~~n~~knr~r~~~i~~~D~sRV~L~~-----~~~YINAnyVdG~~~~~~fIaTQ~Pl~~T~~dFW~MVwe~~~ 116 (298)
T PHA02740 42 ANKACAQAENKAKDENLALHITRLLHRRIKLFN-----DEKVLDARFVDGYDFEQKFICIINLCEDACDKFLQALSDNKV 116 (298)
T ss_pred hhhhhhchhhhcccccccCCcCCccCceEEecC-----CCCcEEEEEecCCCCCCcEEEecCCchhhHHHHHHHHHhcCC
Confidence 566778889999996 6899999999999964 358999999999999999999999999999999999999999
Q ss_pred cEEEEccCcccccccccc-cccCCCC-c-eeeecEEEEEEEEEeecCEEEEEEEEEeCCCCceeEEEEEEeCCCCCCCCC
Q psy8773 821 VTIVMMTKLEERTRIKCD-QYWPSRG-T-ETYGHITVTLQDVQELASYCIRTFMINKGADSERREIKQLQFTAWPDHGVP 897 (1773)
Q Consensus 821 ~vIVMLt~l~E~gk~KC~-qYWP~~~-~-~~yG~~tVtl~~~~~~~~yiiRtl~V~~~~~~~~R~V~hfhyt~WPD~gVP 897 (1773)
.+|||||+..| .||. +|||.+. . ..||.|+|++.++....+|++|.|.|++. .+++|.|+||||++|||+|+|
T Consensus 117 ~iIVMLt~~~e---~kc~~~YWP~~~~~~~~~g~f~V~~~~~~~~~~~~~~~l~l~~~-~~~~r~V~Hfqyt~WPd~gvP 192 (298)
T PHA02740 117 QIIVLISRHAD---KKCFNQFWSLKEGCVITSDKFQIETLEIIIKPHFNLTLLSLTDK-FGQAQKISHFQYTAWPADGFS 192 (298)
T ss_pred CEEEEcccccc---ccccccCCCCCCCCeEEECCEEEEEEEEEecCCEEEEEEEEEcC-CCCcEEEEEEeecCCCCCCcC
Confidence 99999999987 3799 9999853 3 47999999999998889999999999874 577899999999999999999
Q ss_pred CCChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHHHHHhhCCCcchHHHHHHHHhcccc
Q psy8773 898 EHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNY 977 (1773)
Q Consensus 898 ~s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~VDVf~~Vk~LR~QR~~ 977 (1773)
.++..||+|+..|++........ ......||||||||||+||||||||+|++++++..++.|||+++|++||+||++
T Consensus 193 ~~~~~~l~fi~~V~~~~~~~~~~---~~~~~~~PIVVHCSaGvGRTGtFcaiDi~l~~~~~~~~vdi~~~V~~lR~qR~~ 269 (298)
T PHA02740 193 HDPDAFIDFFCNIDDLCADLEKH---KADGKIAPIIIDCIDGISSSAVFCVFDICATEFDKTGMLSIANALKKVRQKKYG 269 (298)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHh---hccCCCCCEEEECCCCCchhHHHHHHHHHHHHHHhcCcccHHHHHHHHHhhCcc
Confidence 99999999999998643211000 001126899999999999999999999999999999999999999999999999
Q ss_pred ccCChhhhhhHHHHHHHHHHcC
Q psy8773 978 MVQTEDQYMFIHDALLEAVLCG 999 (1773)
Q Consensus 978 mVQT~eQY~FiY~aLlEyl~~g 999 (1773)
||||.+||.|||++|++|+...
T Consensus 270 ~Vqt~~QY~F~y~~l~~yl~~~ 291 (298)
T PHA02740 270 CMNCLDDYVFCYHLIAAYLKEK 291 (298)
T ss_pred ccCCHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999998754
No 12
>KOG0791|consensus
Probab=100.00 E-value=1.5e-62 Score=563.38 Aligned_cols=281 Identities=46% Similarity=0.839 Sum_probs=267.5
Q ss_pred CCccHHHHHHHHHHHhhCCchhHHHHHhhcC-CCCcccccccccccccccCCCCCCCCCCCcceEecCCCCCCCCCeEEe
Q psy8773 196 PPIPISRLAQHIENLKANDNLKFSQEYESIE-PGQQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINA 274 (1773)
Q Consensus 196 ~pi~~~~~~~~v~~l~a~~~~~f~~Efe~I~-~~~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~L~~~~~~~~sDYINA 274 (1773)
.||.+++|+.|+..+.++++.+|++||++++ .|...+...|.+++|..||||.||+|||+|||+|.+.+..+++|||||
T Consensus 76 ~~i~len~e~~~~~~~~dsn~~f~eey~~lk~~g~~~~~~aA~l~~n~~knr~~nilpYd~Srvkl~~~~e~~~~DYinA 155 (374)
T KOG0791|consen 76 NPVSLENFELHVKKMSADSNYKFSEEYNELKLVGLDQSKLAALLPLNRPKNRYTNILPYDNSRVKLSPVNEEEGSDYINA 155 (374)
T ss_pred CceeeccchhhhhhcccccchhhHHHHhhhhhhcccchhhhhhcCCCCCcCCcCCCCCcccccceeccccccchhhhhhh
Confidence 4799999999999999999999999999998 577778889999999999999999999999999999999999999999
Q ss_pred eecCCCCCcccEEEeCCCCcCCHHHHHHHHHHcCCcEEEEcccccccCcccccccCCCCCC-ceeeeEEEEEEEEEEecc
Q psy8773 275 NYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRGT-ETYGHITVTLQDVQELAS 353 (1773)
Q Consensus 275 NyI~G~~~~~kyIaTQgPl~~Tv~DFWrMVWEq~v~iIVMLT~l~E~gr~KC~qYWP~~~~-~~yG~~~Vt~~~~~~~~~ 353 (1773)
||++|+..++.|||||||+++|.++||+||||+++.+|||||.+.|++|.||++|||.+.. ..||+++|+...+....+
T Consensus 156 ~~~Pg~~s~~~fIAtQGPlp~t~~~fW~mvwq~~~~~IVmlt~~~e~~R~kc~~ywP~~~~~~~~gdi~V~~v~e~~~~~ 235 (374)
T KOG0791|consen 156 SYIPGYNSPREFIATQGPLPETRDDFWKMVWQQKSHIIVMLTKCNEKGRVKCDEYWPDEEVPVAYGDITVTMVSEESLDE 235 (374)
T ss_pred hhcCCCCCcceEEEeeCCCCCChhHHHHHHHHhhcceEEEEeecccccchhhhhhcccccccceeccEEEEEechhhcCC
Confidence 9999999999999999999999999999999999999999999999999999999999754 689999999999999999
Q ss_pred eEEEEEEEeeCCCCceEEEEEEEecCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCce
Q psy8773 354 YCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTG 433 (1773)
Q Consensus 354 y~iRtf~I~~~~~~esR~V~hfhYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTG 433 (1773)
|++|.|.+. ...++|.++||||+.|||||+|..+..++.|++.++..-... .+|++|||||||||||
T Consensus 236 w~ir~~~l~--~~~~sr~ir~f~y~~wPd~gvp~~~~sl~~f~~~~r~~~~~~-----------~~p~iVhCSAGVgRTG 302 (374)
T KOG0791|consen 236 WTIREFRLN--YAGESRKIRHFHYTAWPDFGVPSSTESLLQFVRMVRQSLDTS-----------KGPTIVHCSAGVGRTG 302 (374)
T ss_pred ceEEEEeee--cccccceeEEEEEeeccccCCCCCchhHHHHHHHHHhhcccC-----------CCceeEEeeccccccc
Confidence 999999998 456789999999999999999999999999999999876543 6799999999999999
Q ss_pred eehhHHHHHHHHhcCCccCHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHcCC
Q psy8773 434 CFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVLCGN 489 (1773)
Q Consensus 434 tFIaID~ll~~l~~e~~VdV~~iV~~LR~qR~~mVQT~eQY~FIy~aLlE~i~~g~ 489 (1773)
||+|+|.+++++..++.+|++++|.+||.+|+.||||++||+|+|+|+++.+..+.
T Consensus 303 TFiald~LLqq~~~~~~vdi~~iv~~lR~~R~~mVqte~Qyvfl~~c~~~~l~~~~ 358 (374)
T KOG0791|consen 303 TFIALDRLLQQIDSEETVDIFGVVLELRSARMLMVQTEDQYVFLHQCVLESLQGKK 358 (374)
T ss_pred chHhHHHHHHHhcccccccHHHHHHHhhhccccccchHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999998765
No 13
>PHA02747 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=4.1e-61 Score=566.20 Aligned_cols=286 Identities=27% Similarity=0.456 Sum_probs=241.1
Q ss_pred hhHHHhhhcccccchhHH-HHHHHHhcCCcccccccCCCCCCcccccchhhhhhcccccccccccCCceeEeeccCCCCC
Q psy8773 701 LSIVLERMQYEGVIDLFQ-TVRILRTQRPAMVQTESIEPGQQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPG 779 (1773)
Q Consensus 701 ls~vl~~~~~~~~~~~~~-~~~~lr~~~~~~~~~e~~~~~~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~Ls~~~g~~~ 779 (1773)
..+++.++......+... ++..+..... ..++.++..++|..||||.||+|||++||+|...++ ..
T Consensus 11 ~~~f~~~~~~~~~~~~i~~E~~~i~~~~~------------~~~~~~~~~~~N~~kNRy~di~p~D~sRV~L~~~~~-~~ 77 (312)
T PHA02747 11 AIDFLKRRNQLNCFGIIRDEHHQIILKPF------------DGLIANFEKPENQPKNRYWDIPCWDHNRVILDSGGG-ST 77 (312)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHhcCCC------------CChhhhhhCchhhccCCCCCCCCCCCCEeEecCCCC-CC
Confidence 456666766655554443 4444322111 124566788999999999999999999999987554 46
Q ss_pred CCceeeEeccCcCCCCceEEecCCCCCChhhhhhheeecCCcEEEEccCcc-cccccccccccCCC--CceeeecEEEEE
Q psy8773 780 SDYINANYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLE-ERTRIKCDQYWPSR--GTETYGHITVTL 856 (1773)
Q Consensus 780 sDYINASyIdGy~~~~~yIaTQgPL~~Tv~DFWrMVwE~~v~vIVMLt~l~-E~gk~KC~qYWP~~--~~~~yG~~tVtl 856 (1773)
+||||||||+||..+++|||||||+++|++|||+||||++|.+|||||++. |.|++||.+|||.+ +...||.|.|++
T Consensus 78 ~dYINAsyV~g~~~~~~yIaTQ~Pl~~T~~dFW~MVwe~~~~~IVMLt~~~~e~g~~kc~~YWp~~~~~~~~~g~~~V~~ 157 (312)
T PHA02747 78 SDYIHANWIDGFEDDKKFIATQGPFAETCADFWKAVWQEHCSIIVMLTPTKGTNGEEKCYQYWCLNEDGNIDMEDFRIET 157 (312)
T ss_pred CCcEEeeeecCCCCCCeEEEeCCCcchhHHHHHHHHHhccCCEEEEcccccccCCcccccccCCCCCCCCeEeeeEEEEE
Confidence 899999999999999999999999999999999999999999999999999 89999999999964 345899999999
Q ss_pred EEEEeecCEEEEEEEEEeCCCCceeEEEEEEeCCCCCCCCCCCChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEc
Q psy8773 857 QDVQELASYCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHC 936 (1773)
Q Consensus 857 ~~~~~~~~yiiRtl~V~~~~~~~~R~V~hfhyt~WPD~gVP~s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHC 936 (1773)
.++....+|+.|+|.|++...+++|.|+||||++|||+|+|.++..+++|+..|+..+........ ......+||||||
T Consensus 158 ~~~~~~~~~~~~~l~l~~~~~~~~r~V~h~~y~~Wpd~~~P~~~~~~l~fi~~v~~~~~~~~~~~~-~~~~~~~PIvVHC 236 (312)
T PHA02747 158 LKTSVRAKYILTLIEITDKILKDSRKISHFQCSEWFEDETPSDHPDFIKFIKIIDINRKKSGKLFN-PKDALLCPIVVHC 236 (312)
T ss_pred EEEEecCCeEEEEEEEEECCCCCceEEEEEEECCCCCCCCCCChHHHHHHHHHHHHHHHHhhcccc-ccccCCCCEEEEe
Confidence 998888999999999999777889999999999999999999999999999888765322110000 0011248999999
Q ss_pred CCCCccchhHhHHHHHHHHHhhCCCcchHHHHHHHHhccccccCChhhhhhH---HHHHHHHHHcCC
Q psy8773 937 SAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFI---HDALLEAVLCGN 1000 (1773)
Q Consensus 937 SaGVGRTGtFIAId~lLeql~~e~~VDVf~~Vk~LR~QR~~mVQT~eQY~Fi---Y~aLlEyl~~g~ 1000 (1773)
|||+||||||||+|++++++..++.+||+++|+.||+||++||||.+||.|| |++|.+|+....
T Consensus 237 saGvGRtGtfcaidi~i~~l~~~~~v~v~~~V~~lR~qR~~~Vqt~~QY~F~~~~Y~~l~~~~~~~~ 303 (312)
T PHA02747 237 SDGVGKTGIFCAVDICLNQLVKRKAICLAKTAEKIREQRHAGIMNFDDYLFIQPGYEVLHYFLSKIK 303 (312)
T ss_pred cCCCcchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999 999999887553
No 14
>PHA02746 protein tyrosine phosphatase; Provisional
Probab=100.00 E-value=3.3e-61 Score=569.17 Aligned_cols=255 Identities=31% Similarity=0.566 Sum_probs=225.5
Q ss_pred ccccchhhhhhcccccccccccCCceeEeeccC-------------------CCCCCCceeeEeccCcCCCCceEEecCC
Q psy8773 743 TWDHSSMEMNKAKNRYANVIAYDHSRVILSTVD-------------------GIPGSDYINANYCDGYRKHNAYVATQGP 803 (1773)
Q Consensus 743 t~~~s~~~~N~~KNRY~nIlpyD~SRV~Ls~~~-------------------g~~~sDYINASyIdGy~~~~~yIaTQgP 803 (1773)
++.++..++|+.||||.||+|||||||+|.... +.+++||||||||+||..+++|||||||
T Consensus 42 t~~~~~~~~N~~KNRy~di~p~D~sRV~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~dYINAsyV~g~~~~~~fIaTQ~P 121 (323)
T PHA02746 42 TTNHFLKKENLKKNRFHDIPCWDHSRVVINAHESLKMFDVGDSDGKKIEVTSEDNAENYIHANFVDGFKEANKFICAQGP 121 (323)
T ss_pred chhhccChhhccccCCCCCCCCcCCEEEecCCCCccccccccccccccccccCCCCCCeEEEecccCCCCCCeEEEeCCC
Confidence 567788899999999999999999999998643 2345899999999999999999999999
Q ss_pred CCCChhhhhhheeecCCcEEEEccCcccccccccccccCCCC--ceeeecEEEEEEEEEeecCEEEEEEEEEeCCCCcee
Q psy8773 804 LQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRG--TETYGHITVTLQDVQELASYCIRTFMINKGADSERR 881 (1773)
Q Consensus 804 L~~Tv~DFWrMVwE~~v~vIVMLt~l~E~gk~KC~qYWP~~~--~~~yG~~tVtl~~~~~~~~yiiRtl~V~~~~~~~~R 881 (1773)
+++|++|||+||||+++.+|||||+++| ++.||++|||.+. ...||.+.|++.+.....+|+.|.|.|++...++.|
T Consensus 122 l~~T~~dFW~MIwe~~v~vIVMLt~~~e-~~~kc~~YWP~~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~l~~~~~~~~r 200 (323)
T PHA02746 122 KEDTSEDFFKLISEHESQVIVSLTDIDD-DDEKCFELWTKEEDSELAFGRFVAKILDIIEELSFTKTRLMITDKISDTSR 200 (323)
T ss_pred ChhhHHHHHHHHHhhCCCEEEEeccccc-CCccCCCCCCCCCCCCeEEcCEEEEEEEEEEcCCeEEEEEEEEECCCCCce
Confidence 9999999999999999999999999864 6789999999863 357999999999888888999999999988778899
Q ss_pred EEEEEEeCCCCCCCCCCCChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHHHHHhhCCC
Q psy8773 882 EIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKT 961 (1773)
Q Consensus 882 ~V~hfhyt~WPD~gVP~s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~ 961 (1773)
.|+||||++|||+|+|.++..||+|++.|++.+........ ......+|||||||||+||||||||+|+++++++.++.
T Consensus 201 ~V~h~~y~~Wpd~gvP~~~~~~l~~i~~v~~~~~~~~~~~~-~~~~~~~PIvVHCsaGvGRTGtfcaid~~l~~l~~~~~ 279 (323)
T PHA02746 201 EIHHFWFPDWPDNGIPTGMAEFLELINKVNEEQAELIKQAD-NDPQTLGPIVVHCSAGIGRAGTFCAIDNALEQLEKEKE 279 (323)
T ss_pred EEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHhhhhc-cCCCCCCCEEEEcCCCCCcchhHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999876421100000 00112489999999999999999999999999999999
Q ss_pred cchHHHHHHHHhccccccCChhhhhhHHHHHHHHHHcC
Q psy8773 962 VDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVLCG 999 (1773)
Q Consensus 962 VDVf~~Vk~LR~QR~~mVQT~eQY~FiY~aLlEyl~~g 999 (1773)
+||+++|+.||+||++||||.+||.|||++|.++|...
T Consensus 280 vdv~~~V~~lR~qR~~~Vqt~~QY~F~y~~l~~~l~~~ 317 (323)
T PHA02746 280 VCLGEIVLKIRKQRHSSVFLPEQYAFCYKALKYAIIEE 317 (323)
T ss_pred CCHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999998754
No 15
>PHA02738 hypothetical protein; Provisional
Probab=100.00 E-value=5.1e-60 Score=558.48 Aligned_cols=249 Identities=36% Similarity=0.639 Sum_probs=221.4
Q ss_pred hhhhcccccccccccCCceeEeeccCCCCCCCceeeEeccCcCCCCceEEecCCCCCChhhhhhheeecCCcEEEEccCc
Q psy8773 750 EMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINANYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKL 829 (1773)
Q Consensus 750 ~~N~~KNRY~nIlpyD~SRV~Ls~~~g~~~sDYINASyIdGy~~~~~yIaTQgPL~~Tv~DFWrMVwE~~v~vIVMLt~l 829 (1773)
..|++||||.||+|||++||+|+..++ ++||||||||||+..+++|||||||+++|++|||+||||++|.+|||||+.
T Consensus 47 ~~N~~kNR~~~v~~~d~sRV~L~~~~~--~~dYINAsyVdg~~~~~kfI~TQ~Pl~~T~~dFW~MVwe~~v~~IVmL~~~ 124 (320)
T PHA02738 47 KKNRKLNRYLDAVCFDHSRVILPAERN--RGDYINANYVDGFEYKKKFICGQAPTRQTCYDFYRMLWMEHVQIIVMLCKK 124 (320)
T ss_pred HHhhhhCCCCCcCCCcCCEEEeCCCCC--CCCceEeEEecCCCCCceeEEecCCChHHHHHHHHHHHHhCCcEEEEeeeh
Confidence 449999999999999999999976443 589999999999999999999999999999999999999999999999999
Q ss_pred ccccccccccccCCC--CceeeecEEEEEEEEEeecCEEEEEEEEEeCCCCceeEEEEEEeCCCCCCCCCCCChhHHHHH
Q psy8773 830 EERTRIKCDQYWPSR--GTETYGHITVTLQDVQELASYCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFL 907 (1773)
Q Consensus 830 ~E~gk~KC~qYWP~~--~~~~yG~~tVtl~~~~~~~~yiiRtl~V~~~~~~~~R~V~hfhyt~WPD~gVP~s~~~lL~fl 907 (1773)
.|.++.||++|||.. +...||.|+|++.++....+|+.|+|.|++. .+..|.|+||||++|||+|+|.++..|++|+
T Consensus 125 ~E~~~~kc~~YWp~~~~~~~~~g~f~V~~~~~~~~~~~~~~~l~l~~~-~~~~r~V~h~~y~~Wpd~gvP~~~~~~l~fi 203 (320)
T PHA02738 125 KENGREKCFPYWSDVEQGSIRFGKFKITTTQVETHPHYVKSTLLLTDG-TSATQTVTHFNFTAWPDHDVPKNTSEFLNFV 203 (320)
T ss_pred hhCCeeeccccCCCCCCCceEeccEEEEEEEEEecCCeEEEEEEEEeC-CCCcEEEEEEEECCCCCCCCCCCHHHHHHHH
Confidence 999999999999975 3458999999999999999999999999874 5678999999999999999999999999999
Q ss_pred HHHHhhCCCCC--CCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHHHHHhhCCCcchHHHHHHHHhccccccCChhhh
Q psy8773 908 RRVRAMNPGTN--SLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQY 985 (1773)
Q Consensus 908 ~~V~~~~~~~~--~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~VDVf~~Vk~LR~QR~~mVQT~eQY 985 (1773)
..|++.+.... ...........+|||||||+|+||||||||+|++++++..++.+||+++|++||+||++||||.+||
T Consensus 204 ~~V~~~~~~~~~~~~~~~~~~~~~~PIVVHCs~GiGRtGtFcaidi~i~~~~~~~~vdv~~~V~~lR~qR~~~vqt~~QY 283 (320)
T PHA02738 204 LEVRQCQKELAQESLQIGHNRLQPPPIVVHCNAGLGRTPCYCVVDISISRFDACATVSIPSIVSSIRNQRYYSLFIPFQY 283 (320)
T ss_pred HHHHHHHHHhhhhhcccCccccCCCCeEEEcCCCCChhhhhhHHHHHHHHHHhcCCcCHHHHHHHHHhhhhhccCCHHHH
Confidence 99987532110 0000000112479999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHcCCc
Q psy8773 986 MFIHDALLEAVLCGNT 1001 (1773)
Q Consensus 986 ~FiY~aLlEyl~~g~t 1001 (1773)
.|||++|++|+.....
T Consensus 284 ~F~y~~l~~y~~~~~~ 299 (320)
T PHA02738 284 FFCYRAVKRYVNLTVN 299 (320)
T ss_pred HHHHHHHHHHHHhcCc
Confidence 9999999999985543
No 16
>KOG0792|consensus
Probab=100.00 E-value=9.6e-60 Score=585.50 Aligned_cols=277 Identities=38% Similarity=0.652 Sum_probs=249.4
Q ss_pred cHHHHHHHHHHHhhCCchhHHHHHhhcCCC-CcccccccccccccccCCCCCCCCCCCcceEecCCCCCCCCCeEEeeec
Q psy8773 199 PISRLAQHIENLKANDNLKFSQEYESIEPG-QQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINANYC 277 (1773)
Q Consensus 199 ~~~~~~~~v~~l~a~~~~~f~~Efe~I~~~-~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~L~~~~~~~~sDYINANyI 277 (1773)
+.++..+.+++.-.++ ....|||.|... ....+.++.+++|..||||+||+|||.+||.|.+..+. +..|||||+|
T Consensus 853 ~~dks~~~L~~~L~~g--~v~~efE~i~rkkp~~~~~~a~lpeN~~KNRyrdvlPYD~tRV~L~~~~~~-nagYINAS~i 929 (1144)
T KOG0792|consen 853 SLDKSCIILAQGLEDG--MVFTEFEQIYRKKPGMACSIARLPENAPKNRYRDVLPYDDTRVELQPSKDN-NAGYINASHI 929 (1144)
T ss_pred chhhHHHHHHhhhhcC--chHHHHHHHhhhCCCceeeeccccccccccccCCcCCCcCceeeeccCCCC-Ccccccceee
Confidence 4444444444433332 455799998754 46688999999999999999999999999999987654 6789999998
Q ss_pred CCC--CCcccEEEeCCCCcCCHHHHHHHHHHcCCcEEEEcccccccCcccccccCCCCC--CceeeeEEEEEEEEEEecc
Q psy8773 278 DGY--RKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRG--TETYGHITVTLQDVQELAS 353 (1773)
Q Consensus 278 ~G~--~~~~kyIaTQgPl~~Tv~DFWrMVWEq~v~iIVMLT~l~E~gr~KC~qYWP~~~--~~~yG~~~Vt~~~~~~~~~ 353 (1773)
... ...+.|||||||++.|+.|||+|||||++.+|||||..+|.||.||++|||..+ +..||.|.|+|...+....
T Consensus 930 ~ipvgg~e~~YIA~QGPLp~T~~DFWQMVWEQ~~~lIvMlT~e~EggR~KchqYWPr~~~~t~~ygrf~v~~~~~~~t~~ 1009 (1144)
T KOG0792|consen 930 EIPVGGIENRYIACQGPLPHTCTDFWQMVWEQGSTLIVMLTTEVEGGRVKCHQYWPRLGHETMEYGRFQVTCVFEQQTTC 1009 (1144)
T ss_pred EeeecceeEEEEEecCCCcchHHHHHHHHHhcCceEEEEEeehhhcCeeccccccCCCCccceeccceEEEEEEeccccc
Confidence 743 456789999999999999999999999999999999999999999999999874 4589999999999999999
Q ss_pred eEEEEEEEeeCCCCceEEEEEEEecCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCce
Q psy8773 354 YCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTG 433 (1773)
Q Consensus 354 y~iRtf~I~~~~~~esR~V~hfhYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTG 433 (1773)
|+.|.|.|.+..+++.|+|+|+||++|||||+|+++..||+|+..|+..+... ..|||||||||+||||
T Consensus 1010 y~tr~m~l~~~~t~eeR~V~hLQYtaWPDHg~P~D~~~FL~FleevrsvR~~t-----------~pPilvHCSAGiGRTG 1078 (1144)
T KOG0792|consen 1010 YVTREMTLKDLQTREERTVWHLQYTAWPDHGVPDDPNDFLDFLEEVRSVRRGT-----------NPPILVHCSAGIGRTG 1078 (1144)
T ss_pred EEEEeEEEeeccCCceeeeeeeeecccccCCCCCChHHHHHHHHHHHHHhccC-----------CCCeEEEccCCCCcce
Confidence 99999999999999999999999999999999999999999999999988754 3599999999999999
Q ss_pred eehhHHHHHHHHhcCCccCHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHcCC
Q psy8773 434 CFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVLCGN 489 (1773)
Q Consensus 434 tFIaID~ll~~l~~e~~VdV~~iV~~LR~qR~~mVQT~eQY~FIy~aLlE~i~~g~ 489 (1773)
++|.+|.++..++++..||+.++|..||.||+.||||..||.|||++|+.++..+.
T Consensus 1079 VlIl~e~~l~lle~Ne~vdi~divr~mR~QR~~mVQT~~QYkFVyevil~~l~~~~ 1134 (1144)
T KOG0792|consen 1079 VLILMETALCLLEHNEPVDILDIVRTMRDQRAMMVQTLSQYKFVYEVILRVLKRGR 1134 (1144)
T ss_pred ehHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhccchHHhhHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999998765
No 17
>smart00194 PTPc Protein tyrosine phosphatase, catalytic domain.
Probab=100.00 E-value=8.5e-58 Score=524.67 Aligned_cols=254 Identities=49% Similarity=0.862 Sum_probs=236.6
Q ss_pred HHHHHhhcCCCC-c-ccccccccccccccCCCCCCCCCCCcceEecCCCCCCCCCeEEeeecCCCCCcccEEEeCCCCcC
Q psy8773 218 FSQEYESIEPGQ-Q-FTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINANYCDGYRKHNAYVATQGPLQE 295 (1773)
Q Consensus 218 f~~Efe~I~~~~-~-~t~~~s~~~~N~~KNRY~nIlpyD~SRV~L~~~~~~~~sDYINANyI~G~~~~~kyIaTQgPl~~ 295 (1773)
|.+||+.|.... . .++..+..++|..||||.||+|||+|||+|...++ .++||||||||+|+..+++||+||+|+++
T Consensus 2 ~~~e~~~i~~~~~~~~~~~~~~~~~n~~kNR~~~v~~~d~~RV~l~~~~~-~~~~YInAs~v~~~~~~~~fI~tQ~P~~~ 80 (258)
T smart00194 2 LEEEFEKLDRLKPDDESCTVAARPENRDKNRYKDVLPYDHTRVKLTPPPG-EGSDYINASYIDGPNGPKAYIATQGPLPS 80 (258)
T ss_pred hHHHHHHhhccCCCCccccccCCccccccCCCCCCCCCCCCEeEccCCCC-CCCCceeeeeEecCCCccceEEeCCCchH
Confidence 678999997533 2 57788899999999999999999999999988654 46899999999999999999999999999
Q ss_pred CHHHHHHHHHHcCCcEEEEcccccccCcccccccCCCCC-CceeeeEEEEEEEEEEecceEEEEEEEeeCCCCceEEEEE
Q psy8773 296 TLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRG-TETYGHITVTLQDVQELASYCIRTFMINKGADSERREIKQ 374 (1773)
Q Consensus 296 Tv~DFWrMVWEq~v~iIVMLT~l~E~gr~KC~qYWP~~~-~~~yG~~~Vt~~~~~~~~~y~iRtf~I~~~~~~esR~V~h 374 (1773)
|++|||+||||+++.+|||||...|.++.||.+|||.+. ...||.|+|++.+.+...+++.|+|.|+..+.+++|.|+|
T Consensus 81 t~~dFW~mv~~~~~~~IVmL~~~~e~~~~~~~~Ywp~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~v~~~~~~~~~~v~~ 160 (258)
T smart00194 81 TVEDFWRMVWEEKVTTIVMLTELEEKGREKCAQYWPEEEEPLTYGDITVTLKSVEKVDDYTIRTLEVTNTGCSETRTVTH 160 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEeccceeCCEeeccccCCCCCCcceECCEEEEEEEEEecCCEEEEEEEEEECCCCCcEEEEE
Confidence 999999999999999999999999999999999999986 5689999999999999999999999999987789999999
Q ss_pred EEecCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCceeehhHHHHHHHHhcCCccCHH
Q psy8773 375 LQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIY 454 (1773)
Q Consensus 375 fhYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTGtFIaID~ll~~l~~e~~VdV~ 454 (1773)
|||++|||+|+|.++..+++|++.|+...... .+||||||++|+||||+|||+|++++++..++.+|+.
T Consensus 161 ~~y~~W~d~~~P~~~~~~~~~i~~v~~~~~~~-----------~~pivVHC~~G~gRsg~f~a~~~~~~~l~~~~~v~v~ 229 (258)
T smart00194 161 YHYTNWPDHGVPESPKSILDLVRAVRKSQSTS-----------TGPIVVHCSAGVGRTGTFIAIDILLQQLEAGKEVDIF 229 (258)
T ss_pred EeeCCCCCCCCCCCHHHHHHHHHHHHHhhccC-----------CCCEEEEeCCCCCccchhhHHHHHHHHHHHcCCCCHH
Confidence 99999999999999999999999999875432 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCCHHHHHHHHHHHHH
Q psy8773 455 GHVTCLRAQRNYMVQTEDQYMFIHDALLE 483 (1773)
Q Consensus 455 ~iV~~LR~qR~~mVQT~eQY~FIy~aLlE 483 (1773)
++|..||+||++||++.+||.|||.+|++
T Consensus 230 ~~v~~lR~~R~~~v~~~~Qy~f~~~~l~~ 258 (258)
T smart00194 230 EIVKELRSQRPGMVQTEEQYIFLYRAILE 258 (258)
T ss_pred HHHHHHHhccccccCCHHHHHHHHHHHhC
Confidence 99999999999999999999999999874
No 18
>KOG0792|consensus
Probab=100.00 E-value=2.3e-57 Score=564.38 Aligned_cols=246 Identities=42% Similarity=0.720 Sum_probs=229.8
Q ss_pred cccchhhhhhcccccccccccCCceeEeeccCCCCCCCceeeEeccCc--CCCCceEEecCCCCCChhhhhhheeecCCc
Q psy8773 744 WDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINANYCDGY--RKHNAYVATQGPLQETLGDFWRMVWELRSV 821 (1773)
Q Consensus 744 ~~~s~~~~N~~KNRY~nIlpyD~SRV~Ls~~~g~~~sDYINASyIdGy--~~~~~yIaTQgPL~~Tv~DFWrMVwE~~v~ 821 (1773)
+..+..++|..||||+||+|||.+||.|.+..+. ...|||||+|.-. +..+.||||||||+.|+.|||+||||+++.
T Consensus 886 ~~~a~lpeN~~KNRyrdvlPYD~tRV~L~~~~~~-nagYINAS~i~ipvgg~e~~YIA~QGPLp~T~~DFWQMVWEQ~~~ 964 (1144)
T KOG0792|consen 886 CSIARLPENAPKNRYRDVLPYDDTRVELQPSKDN-NAGYINASHIEIPVGGIENRYIACQGPLPHTCTDFWQMVWEQGST 964 (1144)
T ss_pred eeeccccccccccccCCcCCCcCceeeeccCCCC-CcccccceeeEeeecceeEEEEEecCCCcchHHHHHHHHHhcCce
Confidence 5568899999999999999999999999876543 6789999998743 456789999999999999999999999999
Q ss_pred EEEEccCcccccccccccccCCCC--ceeeecEEEEEEEEEeecCEEEEEEEEEeCCCCceeEEEEEEeCCCCCCCCCCC
Q psy8773 822 TIVMMTKLEERTRIKCDQYWPSRG--TETYGHITVTLQDVQELASYCIRTFMINKGADSERREIKQLQFTAWPDHGVPEH 899 (1773)
Q Consensus 822 vIVMLt~l~E~gk~KC~qYWP~~~--~~~yG~~tVtl~~~~~~~~yiiRtl~V~~~~~~~~R~V~hfhyt~WPD~gVP~s 899 (1773)
+|||||..+|.|+.||++|||..+ ...||.|.|+|...+....|+.|.|++.+...++.|.|+|+||+.|||||+|++
T Consensus 965 lIvMlT~e~EggR~KchqYWPr~~~~t~~ygrf~v~~~~~~~t~~y~tr~m~l~~~~t~eeR~V~hLQYtaWPDHg~P~D 1044 (1144)
T KOG0792|consen 965 LIVMLTTEVEGGRVKCHQYWPRLGHETMEYGRFQVTCVFEQQTTCYVTREMTLKDLQTREERTVWHLQYTAWPDHGVPDD 1044 (1144)
T ss_pred EEEEEeehhhcCeeccccccCCCCccceeccceEEEEEEecccccEEEEeEEEeeccCCceeeeeeeeecccccCCCCCC
Confidence 999999999999999999999874 458999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHHHHHhhCCCcchHHHHHHHHhcccccc
Q psy8773 900 PAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMV 979 (1773)
Q Consensus 900 ~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~VDVf~~Vk~LR~QR~~mV 979 (1773)
+..||+|+..|+..+... ..|||||||||+||||++|+++.++-.++.+..||+.++|+.||.||.+||
T Consensus 1045 ~~~FL~FleevrsvR~~t-----------~pPilvHCSAGiGRTGVlIl~e~~l~lle~Ne~vdi~divr~mR~QR~~mV 1113 (1144)
T KOG0792|consen 1045 PNDFLDFLEEVRSVRRGT-----------NPPILVHCSAGIGRTGVLILMETALCLLEHNEPVDILDIVRTMRDQRAMMV 1113 (1144)
T ss_pred hHHHHHHHHHHHHHhccC-----------CCCeEEEccCCCCcceehHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhhhc
Confidence 999999999999987643 469999999999999999999999999999999999999999999999999
Q ss_pred CChhhhhhHHHHHHHHHHcCCc
Q psy8773 980 QTEDQYMFIHDALLEAVLCGNT 1001 (1773)
Q Consensus 980 QT~eQY~FiY~aLlEyl~~g~t 1001 (1773)
||+.||.|||++|+.++..+--
T Consensus 1114 QT~~QYkFVyevil~~l~~~~l 1135 (1144)
T KOG0792|consen 1114 QTLSQYKFVYEVILRVLKRGRL 1135 (1144)
T ss_pred cchHHhhHHHHHHHHHHHhccc
Confidence 9999999999999999987753
No 19
>smart00194 PTPc Protein tyrosine phosphatase, catalytic domain.
Probab=100.00 E-value=1.5e-55 Score=506.09 Aligned_cols=254 Identities=46% Similarity=0.821 Sum_probs=233.5
Q ss_pred cchhccccccCCCccccccCCCcccCCCCCCCCCCCCCCceecccCCCCCCCCcceeeeeccccCCCeEEEecCCCcccH
Q psy8773 1297 TEFKKLSNIRAEPSRFISASLPCNKHKNRLVHILPVESSRVCLTPVRGIEGSDYINASFIDGYRLRSAYIATQGPLADTT 1376 (1773)
Q Consensus 1297 ~~~~~~~~~~~~~~~~~~~~~~~n~~knr~~~~~p~d~~rv~L~~~~~~~~sdYINAsfidGY~~~~~fI~TQ~Pl~~Tv 1376 (1773)
+||+.+.+....++.+..+.++.|..|||+.+++|+|++||.|.+..| +++||||||||+||..++.||+||+||++|+
T Consensus 4 ~e~~~i~~~~~~~~~~~~~~~~~n~~kNR~~~v~~~d~~RV~l~~~~~-~~~~YInAs~v~~~~~~~~fI~tQ~P~~~t~ 82 (258)
T smart00194 4 EEFEKLDRLKPDDESCTVAARPENRDKNRYKDVLPYDHTRVKLTPPPG-EGSDYINASYIDGPNGPKAYIATQGPLPSTV 82 (258)
T ss_pred HHHHHhhccCCCCccccccCCccccccCCCCCCCCCCCCEeEccCCCC-CCCCceeeeeEecCCCccceEEeCCCchHHH
Confidence 366666654443466778999999999999999999999999988665 6789999999999999999999999999999
Q ss_pred HHHHHHHHhccccEEEEcccccccCceeeeeeeecccccccccceeeeeecCCCCCCCCCCCCcchhhhhhhcccccccC
Q psy8773 1377 EDFWRMLWEHNSTIVVMLTKLKEMGRYVLREFKVTDARDATSRTLRQFQLIDWPEQGVPKSGDGFIDFIGQVHKTKEQFG 1456 (1773)
Q Consensus 1377 ~DFWrMV~e~~~~~IVmL~~~~e~~~~~~r~~~~~~~~~~~~~~v~q~~~~~Wp~~~~p~~~~~~~d~~~~v~~~~~~~~ 1456 (1773)
+|||+|||+++|.+||||++..|.|+
T Consensus 83 ~dFW~mv~~~~~~~IVmL~~~~e~~~------------------------------------------------------ 108 (258)
T smart00194 83 EDFWRMVWEEKVTTIVMLTELEEKGR------------------------------------------------------ 108 (258)
T ss_pred HHHHHHHHhcCCCEEEEeccceeCCE------------------------------------------------------
Confidence 99999999999999999999887765
Q ss_pred CCCCeEEEecccccccccccccccccCcccccccchhhhhhhhhccccccccccCCCC-ceeeEeEEEEEeeeecCCCeE
Q psy8773 1457 QDGPITVHCSLLSLHINLTQSEWGREKPVAQLSFCSVLIAYLVLFSQEKCHQYWPSER-SIRYEWFVVEPIAEYNMPQYV 1535 (1773)
Q Consensus 1457 ~~gpi~vhc~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~c~~ywp~~~-~~~yG~~~V~~~se~~~~~yi 1535 (1773)
++|.+|||.+. ...||.|.|+..++....+++
T Consensus 109 -----------------------------------------------~~~~~Ywp~~~~~~~~g~~~V~~~~~~~~~~~~ 141 (258)
T smart00194 109 -----------------------------------------------EKCAQYWPEEEEPLTYGDITVTLKSVEKVDDYT 141 (258)
T ss_pred -----------------------------------------------eeccccCCCCCCcceECCEEEEEEEEEecCCEE
Confidence 78999999986 678999999999999999999
Q ss_pred EEEEEEEeCCCCCceEEeeEEecCCCCCCCCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHh
Q psy8773 1536 LREFKVTDARDATSRTLRQFQLIDWPEQGVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLER 1615 (1773)
Q Consensus 1536 ~R~f~Vt~~~~~~~r~V~qfQ~~~WPd~gvP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleq 1615 (1773)
.|+|.|++...++++.|+||||++||++++|.+...+++|+..|.+..... ++||+|||++|+||||+|||+.+++++
T Consensus 142 ~~~l~v~~~~~~~~~~v~~~~y~~W~d~~~P~~~~~~~~~i~~v~~~~~~~--~~pivVHC~~G~gRsg~f~a~~~~~~~ 219 (258)
T smart00194 142 IRTLEVTNTGCSETRTVTHYHYTNWPDHGVPESPKSILDLVRAVRKSQSTS--TGPIVVHCSAGVGRTGTFIAIDILLQQ 219 (258)
T ss_pred EEEEEEEECCCCCcEEEEEEeeCCCCCCCCCCCHHHHHHHHHHHHHhhccC--CCCEEEEeCCCCCccchhhHHHHHHHH
Confidence 999999998778999999999999999999999999999999999876542 579999999999999999999999999
Q ss_pred hcccCCcCHHHHHHHHHhcCCCCCCChhhhccccHHHHHHHH
Q psy8773 1616 MQYEGVIDLFQTVRILRTQRPAMVQTEHLYTSSPFSEQLALD 1657 (1773)
Q Consensus 1616 lk~E~~VDVFQtVK~lR~~RPgmVqT~eQY~~~~f~Y~~~~e 1657 (1773)
++.++.+||+++|+.||.+||++|++.+||. |||+++++
T Consensus 220 l~~~~~v~v~~~v~~lR~~R~~~v~~~~Qy~---f~~~~l~~ 258 (258)
T smart00194 220 LEAGKEVDIFEIVKELRSQRPGMVQTEEQYI---FLYRAILE 258 (258)
T ss_pred HHHcCCCCHHHHHHHHHhccccccCCHHHHH---HHHHHHhC
Confidence 9999999999999999999999999999999 99999863
No 20
>KOG0791|consensus
Probab=100.00 E-value=1.3e-55 Score=506.36 Aligned_cols=250 Identities=47% Similarity=0.849 Sum_probs=235.6
Q ss_pred CCcccccchhhhhhcccccccccccCCceeEeeccCCCCCCCceeeEeccCcCCCCceEEecCCCCCChhhhhhheeecC
Q psy8773 740 QQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINANYCDGYRKHNAYVATQGPLQETLGDFWRMVWELR 819 (1773)
Q Consensus 740 ~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~Ls~~~g~~~sDYINASyIdGy~~~~~yIaTQgPL~~Tv~DFWrMVwE~~ 819 (1773)
...+...|..+.|..||||.||+|||+|||+|.+.+..+++|||||||+.|+..++.|||||||+++|.+|||+||||++
T Consensus 110 ~~~~~~aA~l~~n~~knr~~nilpYd~Srvkl~~~~e~~~~DYinA~~~Pg~~s~~~fIAtQGPlp~t~~~fW~mvwq~~ 189 (374)
T KOG0791|consen 110 LDQSKLAALLPLNRPKNRYTNILPYDNSRVKLSPVNEEEGSDYINASYIPGYNSPREFIATQGPLPETRDDFWKMVWQQK 189 (374)
T ss_pred ccchhhhhhcCCCCCcCCcCCCCCcccccceeccccccchhhhhhhhhcCCCCCcceEEEeeCCCCCChhHHHHHHHHhh
Confidence 33456678889999999999999999999999999988999999999999999999999999999999999999999999
Q ss_pred CcEEEEccCcccccccccccccCCCCc-eeeecEEEEEEEEEeecCEEEEEEEEEeCCCCceeEEEEEEeCCCCCCCCCC
Q psy8773 820 SVTIVMMTKLEERTRIKCDQYWPSRGT-ETYGHITVTLQDVQELASYCIRTFMINKGADSERREIKQLQFTAWPDHGVPE 898 (1773)
Q Consensus 820 v~vIVMLt~l~E~gk~KC~qYWP~~~~-~~yG~~tVtl~~~~~~~~yiiRtl~V~~~~~~~~R~V~hfhyt~WPD~gVP~ 898 (1773)
+.+|||||...|.++.||..|||.+.. ..||+++|+...+....++.+|.|.+. ..+++|.++||||+.|||||+|.
T Consensus 190 ~~~IVmlt~~~e~~R~kc~~ywP~~~~~~~~gdi~V~~v~e~~~~~w~ir~~~l~--~~~~sr~ir~f~y~~wPd~gvp~ 267 (374)
T KOG0791|consen 190 SHIIVMLTKCNEKGRVKCDEYWPDEEVPVAYGDITVTMVSEESLDEWTIREFRLN--YAGESRKIRHFHYTAWPDFGVPS 267 (374)
T ss_pred cceEEEEeecccccchhhhhhcccccccceeccEEEEEechhhcCCceEEEEeee--cccccceeEEEEEeeccccCCCC
Confidence 999999999999999999999998754 689999999999999999999999998 45678999999999999999999
Q ss_pred CChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHHHHHhhCCCcchHHHHHHHHhccccc
Q psy8773 899 HPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYM 978 (1773)
Q Consensus 899 s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~VDVf~~Vk~LR~QR~~m 978 (1773)
++..++.|++.++..-... .+|++|||||||||||||+|+|.+++++..++.+|++++|..||.+|+.|
T Consensus 268 ~~~sl~~f~~~~r~~~~~~-----------~~p~iVhCSAGVgRTGTFiald~LLqq~~~~~~vdi~~iv~~lR~~R~~m 336 (374)
T KOG0791|consen 268 STESLLQFVRMVRQSLDTS-----------KGPTIVHCSAGVGRTGTFIALDRLLQQIDSEETVDIFGVVLELRSARMLM 336 (374)
T ss_pred CchhHHHHHHHHHhhcccC-----------CCceeEEeecccccccchHhHHHHHHHhcccccccHHHHHHHhhhccccc
Confidence 9999999999999875433 68999999999999999999999999999999999999999999999999
Q ss_pred cCChhhhhhHHHHHHHHHHcCCcc
Q psy8773 979 VQTEDQYMFIHDALLEAVLCGNTE 1002 (1773)
Q Consensus 979 VQT~eQY~FiY~aLlEyl~~g~te 1002 (1773)
|||++||.|+|.++++.+..+...
T Consensus 337 Vqte~Qyvfl~~c~~~~l~~~~~~ 360 (374)
T KOG0791|consen 337 VQTEDQYVFLHQCVLESLQGKKPQ 360 (374)
T ss_pred cchHHHHHHHHHHHHHHHhCCCcc
Confidence 999999999999999999988763
No 21
>cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG. Characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active.
Probab=100.00 E-value=8.5e-53 Score=475.37 Aligned_cols=230 Identities=52% Similarity=0.935 Sum_probs=215.2
Q ss_pred ccCCCCCCCCCCCcceEecCCCCCCCCCeEEeeecCCCCCcccEEEeCCCCcCCHHHHHHHHHHcCCcEEEEcccccccC
Q psy8773 243 AKNRYANVIAYDHSRVILSTVDGIPGSDYINANYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERT 322 (1773)
Q Consensus 243 ~KNRY~nIlpyD~SRV~L~~~~~~~~sDYINANyI~G~~~~~kyIaTQgPl~~Tv~DFWrMVWEq~v~iIVMLT~l~E~g 322 (1773)
+||||+|++|||++||+|...+ ...+||||||||+|+..+++||+||+|+++|++|||+||||+++.+||||+...|.+
T Consensus 1 ~knR~~~~~~~d~~rV~l~~~~-~~~~~yinA~~v~~~~~~~~fI~tQ~P~~~t~~~FW~mv~~~~~~~IV~l~~~~e~~ 79 (231)
T cd00047 1 KKNRYKDILPYDHTRVKLKPDD-DEGSDYINASYIDGYNPPKAYIATQGPLPNTVEDFWRMVWEQKVPVIVMLTELVEKG 79 (231)
T ss_pred CCCCCCCCCCCCCCEEEccCCC-CCCCCcEEeeeEecCCCCcceEEcCCCChhhHHHHHHHHHhcCCCEEEEccccccCC
Confidence 4899999999999999998753 235799999999999989999999999999999999999999999999999999999
Q ss_pred cccccccCCCC-CCceeeeEEEEEEEEEEecceEEEEEEEeeCCCCceEEEEEEEecCCCCCCCCCChHHHHHHHHHHHh
Q psy8773 323 RIKCDQYWPSR-GTETYGHITVTLQDVQELASYCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRA 401 (1773)
Q Consensus 323 r~KC~qYWP~~-~~~~yG~~~Vt~~~~~~~~~y~iRtf~I~~~~~~esR~V~hfhYt~WPD~GVP~~~~~lL~Fi~~Vr~ 401 (1773)
+.+|.+|||.+ +...||.|+|++.+++...+++.|+|.|+..+.+.+|.|+||||++|||+++|.++..+++|++.|+.
T Consensus 80 ~~~~~~Ywp~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~i~~~~~~~~~~V~~~~~~~W~d~~~p~~~~~~~~~~~~v~~ 159 (231)
T cd00047 80 REKCAQYWPEEEGSLTYGDITVTLVSEEKLDDYTVRTLKLSNTGTGETRTVTHFQYTGWPDHGVPESPDSLLDLLRKVRK 159 (231)
T ss_pred CccCccCCCCCCCCeEecCEEEEEEEEEEcCCEEEEEEEEEECCCCCceEEEEEeECCCCCCCccCChHHHHHHHHHHHH
Confidence 99999999997 56689999999999999999999999999987789999999999999999999999999999999998
Q ss_pred hCCCCCCccCCCCCCCCCCEEEEcCCCCCCceeehhHHHHHHHHhcCCccCHHHHHHHHHHhcccCCCCHHHHHHHHHHH
Q psy8773 402 MNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDAL 481 (1773)
Q Consensus 402 ~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTGtFIaID~ll~~l~~e~~VdV~~iV~~LR~qR~~mVQT~eQY~FIy~aL 481 (1773)
.... ...+||+|||++|+||||+|||+|++++++..++.+|+.+++..||+||++||+|.+||.|||.+|
T Consensus 160 ~~~~----------~~~~pivVHC~~G~gRsg~~~a~~~~~~~~~~~~~~~~~~~v~~iR~~R~~~v~~~~Qy~f~~~~l 229 (231)
T cd00047 160 SQQQ----------PGSGPIVVHCSAGVGRTGTFIAIDILLQRLEAEGVVDIFQTVKELRSQRPGMVQTEEQYIFLYRAI 229 (231)
T ss_pred Hhcc----------CCCCCeEEECCCCCCccchHHHHHHHHHHHHhcCCCCHHHHHHHHHhccccccCCHHHHHHHHHHH
Confidence 7532 115799999999999999999999999999999999999999999999999999999999999998
Q ss_pred HH
Q psy8773 482 LE 483 (1773)
Q Consensus 482 lE 483 (1773)
++
T Consensus 230 ~~ 231 (231)
T cd00047 230 LE 231 (231)
T ss_pred hC
Confidence 74
No 22
>cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr (pTyr) residues, instead of pSer or pThr. This family has a distinctive active site signature motif, HCSAGxGRxG. Characterized as either transmembrane, receptor-like or non-transmembrane (soluble) PTPs. Receptor-like PTP domains tend to occur in two copies in the cytoplasmic region of the transmembrane proteins, only one copy may be active.
Probab=100.00 E-value=3e-52 Score=470.92 Aligned_cols=230 Identities=52% Similarity=0.935 Sum_probs=215.0
Q ss_pred cccccccccccCCceeEeeccCCCCCCCceeeEeccCcCCCCceEEecCCCCCChhhhhhheeecCCcEEEEccCccccc
Q psy8773 754 AKNRYANVIAYDHSRVILSTVDGIPGSDYINANYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERT 833 (1773)
Q Consensus 754 ~KNRY~nIlpyD~SRV~Ls~~~g~~~sDYINASyIdGy~~~~~yIaTQgPL~~Tv~DFWrMVwE~~v~vIVMLt~l~E~g 833 (1773)
+||||+|++|||++||+|...+ ..++||||||||+|+..+++||+||+|+++|++|||+||||+++.+||||+...|.+
T Consensus 1 ~knR~~~~~~~d~~rV~l~~~~-~~~~~yinA~~v~~~~~~~~fI~tQ~P~~~t~~~FW~mv~~~~~~~IV~l~~~~e~~ 79 (231)
T cd00047 1 KKNRYKDILPYDHTRVKLKPDD-DEGSDYINASYIDGYNPPKAYIATQGPLPNTVEDFWRMVWEQKVPVIVMLTELVEKG 79 (231)
T ss_pred CCCCCCCCCCCCCCEEEccCCC-CCCCCcEEeeeEecCCCCcceEEcCCCChhhHHHHHHHHHhcCCCEEEEccccccCC
Confidence 4899999999999999998643 246899999999999989999999999999999999999999999999999999999
Q ss_pred ccccccccCCC-CceeeecEEEEEEEEEeecCEEEEEEEEEeCCCCceeEEEEEEeCCCCCCCCCCCChhHHHHHHHHHh
Q psy8773 834 RIKCDQYWPSR-GTETYGHITVTLQDVQELASYCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRA 912 (1773)
Q Consensus 834 k~KC~qYWP~~-~~~~yG~~tVtl~~~~~~~~yiiRtl~V~~~~~~~~R~V~hfhyt~WPD~gVP~s~~~lL~fl~~V~~ 912 (1773)
+.+|.+|||.+ +...||.|+|++.+++...+++.|+|+|+..+.+.+|.|+||||++|||+++|.+...+++|+..|+.
T Consensus 80 ~~~~~~Ywp~~~~~~~~g~~~V~~~~~~~~~~~~~~~l~i~~~~~~~~~~V~~~~~~~W~d~~~p~~~~~~~~~~~~v~~ 159 (231)
T cd00047 80 REKCAQYWPEEEGSLTYGDITVTLVSEEKLDDYTVRTLKLSNTGTGETRTVTHFQYTGWPDHGVPESPDSLLDLLRKVRK 159 (231)
T ss_pred CccCccCCCCCCCCeEecCEEEEEEEEEEcCCEEEEEEEEEECCCCCceEEEEEeECCCCCCCccCChHHHHHHHHHHHH
Confidence 99999999987 56789999999999999999999999999987789999999999999999999999999999999988
Q ss_pred hCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHHHHHhhCCCcchHHHHHHHHhccccccCChhhhhhHHHHH
Q psy8773 913 MNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDAL 992 (1773)
Q Consensus 913 ~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~VDVf~~Vk~LR~QR~~mVQT~eQY~FiY~aL 992 (1773)
.... ...+||+|||++|+||||+|||++++++++..++.+|+.++++.||+||++||++.+||.|||++|
T Consensus 160 ~~~~----------~~~~pivVHC~~G~gRsg~~~a~~~~~~~~~~~~~~~~~~~v~~iR~~R~~~v~~~~Qy~f~~~~l 229 (231)
T cd00047 160 SQQQ----------PGSGPIVVHCSAGVGRTGTFIAIDILLQRLEAEGVVDIFQTVKELRSQRPGMVQTEEQYIFLYRAI 229 (231)
T ss_pred Hhcc----------CCCCCeEEECCCCCCccchHHHHHHHHHHHHhcCCCCHHHHHHHHHhccccccCCHHHHHHHHHHH
Confidence 7431 125799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH
Q psy8773 993 LE 994 (1773)
Q Consensus 993 lE 994 (1773)
++
T Consensus 230 ~~ 231 (231)
T cd00047 230 LE 231 (231)
T ss_pred hC
Confidence 74
No 23
>KOG0793|consensus
Probab=100.00 E-value=6.2e-53 Score=501.71 Aligned_cols=259 Identities=39% Similarity=0.663 Sum_probs=239.6
Q ss_pred hHHHHHhhcCCC--CcccccccccccccccCCCCCCCCCCCcceEecCCCCCCCCCeEEeeecCCC-CCcccEEEeCCCC
Q psy8773 217 KFSQEYESIEPG--QQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINANYCDGY-RKHNAYVATQGPL 293 (1773)
Q Consensus 217 ~f~~Efe~I~~~--~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~L~~~~~~~~sDYINANyI~G~-~~~~kyIaTQgPl 293 (1773)
++..|++.|... +..+...++.++|..|||-..++||||+||.|+......++||||||+|-.- ...-.|||||||+
T Consensus 733 rlekeWealc~YqaEpn~r~~aq~e~~a~kNR~~a~LpyDhsrV~l~~~~s~s~~dYiNAS~I~DhDPR~paYIAtQgPl 812 (1004)
T KOG0793|consen 733 RLEKEWEALCAYQAEPNSRFVAQREENAPKNRSLAVLPYDHSRVLLKAENSHSHSDYINASPIMDHDPRNPAYIATQGPL 812 (1004)
T ss_pred HHHHHHHHHHHhhcCcchhhhhcccccccccCCCCccccccceeeeccccCccccccccccccccCCCCccceeeccCCC
Confidence 678999999854 3456778899999999999999999999999999888889999999998533 3456899999999
Q ss_pred cCCHHHHHHHHHHcCCcEEEEcccccccCcccccccCCCCCCceeeeEEEEEEEEEE-ecceEEEEEEEeeCCCCceEEE
Q psy8773 294 QETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRGTETYGHITVTLQDVQE-LASYCIRTFMINKGADSERREI 372 (1773)
Q Consensus 294 ~~Tv~DFWrMVWEq~v~iIVMLT~l~E~gr~KC~qYWP~~~~~~yG~~~Vt~~~~~~-~~~y~iRtf~I~~~~~~esR~V 372 (1773)
+.|+.|||+||||++|.+|||||.+.|+|...|..|||++|.+.|+-|.|.+.++.. ..+|-+|.|-+.+-.++++|+|
T Consensus 813 ~stiA~FWQmvWe~G~~vIV~Lt~l~Engv~qc~rYWPdeGselyhiyEV~LVSEHIWceDfLVRSFYLKNlqtseTRTv 892 (1004)
T KOG0793|consen 813 PSTIADFWQMVWESGCVVIVMLTPLAENGVRQCYRYWPDEGSELYHIYEVNLVSEHIWCEDFLVRSFYLKNLQTSETRTV 892 (1004)
T ss_pred chHHHHHHHHHHHcCcEEEEEecChhhcchhhhhhcCCCCCcceeeeEEeeeehhhhhhhhHHHHHHHHhhcccccceee
Confidence 999999999999999999999999999999999999999999999999999998865 4689999999999999999999
Q ss_pred EEEEecCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCceeehhHHHHHHHHhcC-Ccc
Q psy8773 373 KQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHD-KTV 451 (1773)
Q Consensus 373 ~hfhYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTGtFIaID~ll~~l~~e-~~V 451 (1773)
+||||.+||+.|+|.+..++|+|-++|++++++. ..|||||||+|.|||||||+||+++++|.++ +.+
T Consensus 893 TQFHfLSWp~egvPasarslLdFRRKVNK~YRGR-----------ScpIiVH~sdGaGRTG~YiliDmvl~Rm~kGakeI 961 (1004)
T KOG0793|consen 893 TQFHFLSWPDEGVPASARSLLDFRRKVNKCYRGR-----------SCPIIVHCSDGAGRTGTYILIDMVLNRMAKGAKEI 961 (1004)
T ss_pred eeeeeecccccCCccchHHHHHHHHHhhhhccCC-----------CCceEEEccCCCCccceeeeHHHHHHHHhccchhh
Confidence 9999999999999999999999999999998875 5699999999999999999999999999766 789
Q ss_pred CHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHH
Q psy8773 452 DIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVL 486 (1773)
Q Consensus 452 dV~~iV~~LR~qR~~mVQT~eQY~FIy~aLlE~i~ 486 (1773)
||..++..||.||+|||+|.+||.|++.|+.|-+.
T Consensus 962 DIaATlEHlRDQR~GmVaTkdQFef~l~aVAeEVn 996 (1004)
T KOG0793|consen 962 DIAATLEHLRDQRPGMVATKDQFEFALTAVAEEVN 996 (1004)
T ss_pred hHHHHHHHHhhcCCcceeehhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999998543
No 24
>KOG0793|consensus
Probab=100.00 E-value=1.2e-52 Score=499.18 Aligned_cols=243 Identities=41% Similarity=0.686 Sum_probs=226.5
Q ss_pred cccchhhhhhcccccccccccCCceeEeeccCCCCCCCceeeEeccCc-CCCCceEEecCCCCCChhhhhhheeecCCcE
Q psy8773 744 WDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINANYCDGY-RKHNAYVATQGPLQETLGDFWRMVWELRSVT 822 (1773)
Q Consensus 744 ~~~s~~~~N~~KNRY~nIlpyD~SRV~Ls~~~g~~~sDYINASyIdGy-~~~~~yIaTQgPL~~Tv~DFWrMVwE~~v~v 822 (1773)
+..++.++|..|||...++||||+||.|........+||||||+|-.. ...-+|||||||+++|+.|||+||||++|.+
T Consensus 751 r~~aq~e~~a~kNR~~a~LpyDhsrV~l~~~~s~s~~dYiNAS~I~DhDPR~paYIAtQgPl~stiA~FWQmvWe~G~~v 830 (1004)
T KOG0793|consen 751 RFVAQREENAPKNRSLAVLPYDHSRVLLKAENSHSHSDYINASPIMDHDPRNPAYIATQGPLPSTIADFWQMVWESGCVV 830 (1004)
T ss_pred hhhhcccccccccCCCCccccccceeeeccccCccccccccccccccCCCCccceeeccCCCchHHHHHHHHHHHcCcEE
Confidence 456778899999999999999999999998777788999999998543 4456899999999999999999999999999
Q ss_pred EEEccCcccccccccccccCCCCceeeecEEEEEEEEEe-ecCEEEEEEEEEeCCCCceeEEEEEEeCCCCCCCCCCCCh
Q psy8773 823 IVMMTKLEERTRIKCDQYWPSRGTETYGHITVTLQDVQE-LASYCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPA 901 (1773)
Q Consensus 823 IVMLt~l~E~gk~KC~qYWP~~~~~~yG~~tVtl~~~~~-~~~yiiRtl~V~~~~~~~~R~V~hfhyt~WPD~gVP~s~~ 901 (1773)
|||||.+.|+|...|..|||++|.+.|+-|.|.+.++.. ..+|-+|.|-+++-.++++|+|+||||.+||+.|+|.+..
T Consensus 831 IV~Lt~l~Engv~qc~rYWPdeGselyhiyEV~LVSEHIWceDfLVRSFYLKNlqtseTRTvTQFHfLSWp~egvPasar 910 (1004)
T KOG0793|consen 831 IVMLTPLAENGVRQCYRYWPDEGSELYHIYEVNLVSEHIWCEDFLVRSFYLKNLQTSETRTVTQFHFLSWPDEGVPASAR 910 (1004)
T ss_pred EEEecChhhcchhhhhhcCCCCCcceeeeEEeeeehhhhhhhhHHHHHHHHhhcccccceeeeeeeeecccccCCccchH
Confidence 999999999999999999999999999999999999876 5689999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHHHHHhhC-CCcchHHHHHHHHhccccccC
Q psy8773 902 PFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHD-KTVDIYGHVTCLRAQRNYMVQ 980 (1773)
Q Consensus 902 ~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lLeql~~e-~~VDVf~~Vk~LR~QR~~mVQ 980 (1773)
++|+|-++|+++.++. ..|||||||+|.|||||+|+||+++++|.++ +.+||..++..||.||+|||+
T Consensus 911 slLdFRRKVNK~YRGR-----------ScpIiVH~sdGaGRTG~YiliDmvl~Rm~kGakeIDIaATlEHlRDQR~GmVa 979 (1004)
T KOG0793|consen 911 SLLDFRRKVNKCYRGR-----------SCPIIVHCSDGAGRTGTYILIDMVLNRMAKGAKEIDIAATLEHLRDQRPGMVA 979 (1004)
T ss_pred HHHHHHHHhhhhccCC-----------CCceEEEccCCCCccceeeeHHHHHHHHhccchhhhHHHHHHHHhhcCCccee
Confidence 9999999999987654 5799999999999999999999999999776 789999999999999999999
Q ss_pred ChhhhhhHHHHHHHHHH
Q psy8773 981 TEDQYMFIHDALLEAVL 997 (1773)
Q Consensus 981 T~eQY~FiY~aLlEyl~ 997 (1773)
|.+||.|.+.|+.|-+.
T Consensus 980 TkdQFef~l~aVAeEVn 996 (1004)
T KOG0793|consen 980 TKDQFEFALTAVAEEVN 996 (1004)
T ss_pred ehhhhHHHHHHHHHHHH
Confidence 99999999999998654
No 25
>COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-51 Score=449.95 Aligned_cols=236 Identities=39% Similarity=0.635 Sum_probs=198.1
Q ss_pred cccccccccccccCCCCCCCCCCCcceEecCCCCCCCCCeEEeeecCCCCCcccEEEeCCCCcCCHHHHHHHHHHcCC--
Q psy8773 232 TWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINANYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRS-- 309 (1773)
Q Consensus 232 t~~~s~~~~N~~KNRY~nIlpyD~SRV~L~~~~~~~~sDYINANyI~G~~~~~kyIaTQgPl~~Tv~DFWrMVWEq~v-- 309 (1773)
....+..+.|.+||||.||+||++|||.|+..+ ..+||||||||+... .+|||||||+++|++|||.|||+...
T Consensus 44 s~~~sls~~~~~rNRYsnIvPYe~tRV~Lk~~k--~~~DYINAS~ik~~~--~~yIAtQgP~~~t~ddFW~mvw~n~~~~ 119 (302)
T COG5599 44 SDDTSLSSTNYARNRYSNIVPYEHTRVHLKYGK--SINDYINASYIKTPR--GKYIATQGPKPETIDDFWKMVWHNVPNN 119 (302)
T ss_pred ccccccCccccccccccccccccCceeeccCCC--chhhcccceeeecCC--CceEEecCCCCchHHHHHHHHHhcCCCc
Confidence 444567788999999999999999999999863 368999999999765 45999999999999999999999988
Q ss_pred cEEEEcccccccCcccccccCCCCC--CceeeeEEEEEEEEEEe--cceEEEEEEEeeCCCCceEEEEEEEecCCCCCCC
Q psy8773 310 VTIVMMTKLEERTRIKCDQYWPSRG--TETYGHITVTLQDVQEL--ASYCIRTFMINKGADSERREIKQLQFTAWPDHGV 385 (1773)
Q Consensus 310 ~iIVMLT~l~E~gr~KC~qYWP~~~--~~~yG~~~Vt~~~~~~~--~~y~iRtf~I~~~~~~esR~V~hfhYt~WPD~GV 385 (1773)
.+||||+++.|.+++||.+|||..- ...+|...+.-.+.+.. ..+.++.|+++... +..+.|.||+|.+|+|.++
T Consensus 120 gvIVmLt~l~E~~rekc~qYWp~~~~~~~~~G~~v~~~~~~e~~~d~~~~~~~f~L~~~~-~~~k~Ihhf~y~nW~D~~~ 198 (302)
T COG5599 120 GVIVMLTSLPEYNREKCDQYWPLGYDDTLIIGLRVIKQKKYELFNDNIVNVHNFELTSIN-GPPKKIHHFQYINWVDFNV 198 (302)
T ss_pred eEEEEecChHHHhHHHHhhhCCCCcCcceeeeeEEEEEecccccccceeeeeecccccCC-CCccEEEEEEecCccccCC
Confidence 9999999999999999999999542 23578555555544433 34667888888654 7889999999999999999
Q ss_pred CCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCceeehhHHHHHHHHhcC--------CccC-HHHH
Q psy8773 386 PEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHD--------KTVD-IYGH 456 (1773)
Q Consensus 386 P~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTGtFIaID~ll~~l~~e--------~~Vd-V~~i 456 (1773)
| +..++.++++.+....- ..||++|||||||||||||||+|.++++.... -+.| |+++
T Consensus 199 p-~i~sl~~~~~sl~~sp~------------~t~piiVHCSAGvGRTGTFIalD~ll~~~~~~~~~t~~~~~t~D~if~i 265 (302)
T COG5599 199 P-DIRSLTEVIHSLNDSPV------------RTGPIIVHCSAGVGRTGTFIALDILLRMPNDTLNHTDTWEDTQDLIFQI 265 (302)
T ss_pred c-CHHHHHHHHHHhhcCcC------------CCCCEEEEeccCCCCcceeeeHHHHHhccccccCCCchhhhhhhHHHHH
Confidence 9 66677777666654310 15899999999999999999999999987654 2334 8999
Q ss_pred HHHHHHhcccCCCCHHHHHHHHHHHHHHH
Q psy8773 457 VTCLRAQRNYMVQTEDQYMFIHDALLEAV 485 (1773)
Q Consensus 457 V~~LR~qR~~mVQT~eQY~FIy~aLlE~i 485 (1773)
|..||+||+.||||.+||.|+|.+++++.
T Consensus 266 V~~LRsQRmkmVQn~~Qf~flY~~~~~l~ 294 (302)
T COG5599 266 VLSLRSQRMKMVQNKTQFKFLYDAFLELN 294 (302)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999987
No 26
>PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry repesents several receptor and non-receptor protein-tyrosine phosphatases. Structurally, all known receptor PTPases, are made up of a variable length extracellular domain, followed by a transmembrane region and a C-terminal catalytic cytoplasmic domain. Some of the receptor PTPases contain fibronectin type III (FN-III) repeats, immunoglobulin-like domains, MAM domains or carbonic anhydrase-like domains in their extracellular region. The cytoplasmic region generally contains two copies of the PTPase domain. The first seems to have enzymatic activity, while the second is inactive. The inactive domains of tandem phosphatases can be divided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre []. PTPase domains consist of about 300 amino acids. There are two conserved cysteines, the second one has been shown to be absolutely required for activity. Furthermore, a number of conserved residues in its immediate vicinity have also been shown to be important.; GO: 0004725 protein tyrosine phosphatase activity, 0006470 protein dephosphorylation; PDB: 3O4T_A 3O4S_A 3O4U_A 2A3K_A 2QDP_A 2QDC_A 2QDM_A 2HVL_A 1ZC0_A 3D44_A ....
Probab=100.00 E-value=1.8e-50 Score=453.02 Aligned_cols=230 Identities=41% Similarity=0.832 Sum_probs=208.6
Q ss_pred ccccCCCCCCCCCCCcceEecCCCCCCCCCeEEeeecCCCCCcccEEEeCCCCcCCHHHHHHHHHHcCCcEEEEcccccc
Q psy8773 241 NKAKNRYANVIAYDHSRVILSTVDGIPGSDYINANYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEE 320 (1773)
Q Consensus 241 N~~KNRY~nIlpyD~SRV~L~~~~~~~~sDYINANyI~G~~~~~kyIaTQgPl~~Tv~DFWrMVWEq~v~iIVMLT~l~E 320 (1773)
|++|||+.||+|||++||+|...++ ++||||||||+++...++||+||+|+++|++|||+||||+++.+||||+...|
T Consensus 1 n~~knR~~~~~~~d~~rv~l~~~~~--~~~yi~A~~v~~~~~~~~~I~~q~P~~~t~~~FW~mv~~~~~~~Iv~L~~~~e 78 (235)
T PF00102_consen 1 NREKNRSPDILPYDDSRVKLNPSPG--DSDYINASYVDGYKNGKKFIVTQAPMPDTIEDFWQMVWEQKVQIIVMLCSFDE 78 (235)
T ss_dssp GGGGSSSTTS-BBTTTEEETTTTTT--STTEESEEEEEESSSTEEEEEEES-SGGGHHHHHHHHHHTTBSEEEEESBSEE
T ss_pred CCccCCCCCCCcCcceEEEecCCCC--ccchhhhhhhccccchhhheeecccccccccceehheeeccccceeccccccc
Confidence 8899999999999999999954333 36799999999998899999999999999999999999999999999999999
Q ss_pred cCcccccccCCCCC--CceeeeEEEEEE-EEE-EecceEEEEEEEeeCCCC-ceEEEEEEEecCCCCCCCCCChHHHHHH
Q psy8773 321 RTRIKCDQYWPSRG--TETYGHITVTLQ-DVQ-ELASYCIRTFMINKGADS-ERREIKQLQFTAWPDHGVPEHPAPFLLF 395 (1773)
Q Consensus 321 ~gr~KC~qYWP~~~--~~~yG~~~Vt~~-~~~-~~~~y~iRtf~I~~~~~~-esR~V~hfhYt~WPD~GVP~~~~~lL~F 395 (1773)
.+..+|.+|||.+. ...||.++|++. +.. ....+++|+|.|.....+ .+|.+.||||+.||++++|.+...++.|
T Consensus 79 ~~~~~~~~y~P~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~v~~~~~~~W~~~~~P~~~~~~~~~ 158 (235)
T PF00102_consen 79 SGDEKCDQYWPLKEGESLKFGDYTVKCKEKIEENSKHYTVRKLEVTNGKSKKKSRTVTHFHYTNWPDDGVPPSPESFLDF 158 (235)
T ss_dssp TTEESS--TSTSSSSSEEEETTEEEEEEEEEEEEESSEEEEEEEEEETTTTEEEEEEEEEEEESSSSSSSGSSSHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccceEEeeccccccccccccccccceeeeeccccccccccchhhhh
Confidence 99999999999543 358999999999 666 778999999999998776 3899999999999999999999999999
Q ss_pred HHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCceeehhHHHHHHHHhcCCccCHHHHHHHHHHhcccCCCCHHHHH
Q psy8773 396 LRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYM 475 (1773)
Q Consensus 396 i~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTGtFIaID~ll~~l~~e~~VdV~~iV~~LR~qR~~mVQT~eQY~ 475 (1773)
++.+++.... ..+|+||||++|+||||+||+++++++++..++.+||.+++..||+||+++|++.+||.
T Consensus 159 ~~~v~~~~~~-----------~~~pivVhc~~G~gRsg~f~~~~~~~~~~~~~~~~~v~~~~~~lR~~R~~~i~~~~qy~ 227 (235)
T PF00102_consen 159 IRKVNKSKDD-----------PNGPIVVHCSDGVGRSGTFCAIDILIEQLKKEGEVDVFEIVKKLRQQRPGAIQSPEQYR 227 (235)
T ss_dssp HHHHHHHHST-----------TSSEEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHTTSTTSSSSHHHHH
T ss_pred hhhccccccC-----------CccceEeecccccccccccccchhhccccccccchhhHHHHHHHHhhCCCccCCHHHHH
Confidence 9999998622 26899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH
Q psy8773 476 FIHDALLE 483 (1773)
Q Consensus 476 FIy~aLlE 483 (1773)
|+|.+++|
T Consensus 228 f~~~~~~e 235 (235)
T PF00102_consen 228 FCYMAVLE 235 (235)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhC
Confidence 99999997
No 27
>PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry repesents several receptor and non-receptor protein-tyrosine phosphatases. Structurally, all known receptor PTPases, are made up of a variable length extracellular domain, followed by a transmembrane region and a C-terminal catalytic cytoplasmic domain. Some of the receptor PTPases contain fibronectin type III (FN-III) repeats, immunoglobulin-like domains, MAM domains or carbonic anhydrase-like domains in their extracellular region. The cytoplasmic region generally contains two copies of the PTPase domain. The first seems to have enzymatic activity, while the second is inactive. The inactive domains of tandem phosphatases can be divided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre []. PTPase domains consist of about 300 amino acids. There are two conserved cysteines, the second one has been shown to be absolutely required for activity. Furthermore, a number of conserved residues in its immediate vicinity have also been shown to be important.; GO: 0004725 protein tyrosine phosphatase activity, 0006470 protein dephosphorylation; PDB: 3O4T_A 3O4S_A 3O4U_A 2A3K_A 2QDP_A 2QDC_A 2QDM_A 2HVL_A 1ZC0_A 3D44_A ....
Probab=100.00 E-value=4e-50 Score=450.25 Aligned_cols=230 Identities=41% Similarity=0.832 Sum_probs=208.3
Q ss_pred hhcccccccccccCCceeEeeccCCCCCCCceeeEeccCcCCCCceEEecCCCCCChhhhhhheeecCCcEEEEccCccc
Q psy8773 752 NKAKNRYANVIAYDHSRVILSTVDGIPGSDYINANYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEE 831 (1773)
Q Consensus 752 N~~KNRY~nIlpyD~SRV~Ls~~~g~~~sDYINASyIdGy~~~~~yIaTQgPL~~Tv~DFWrMVwE~~v~vIVMLt~l~E 831 (1773)
|++|||+.|++|||++||+|...++ ++||||||||+|+...+.||+||+|+++|++|||+||||++|.+||||+...|
T Consensus 1 n~~knR~~~~~~~d~~rv~l~~~~~--~~~yi~A~~v~~~~~~~~~I~~q~P~~~t~~~FW~mv~~~~~~~Iv~L~~~~e 78 (235)
T PF00102_consen 1 NREKNRSPDILPYDDSRVKLNPSPG--DSDYINASYVDGYKNGKKFIVTQAPMPDTIEDFWQMVWEQKVQIIVMLCSFDE 78 (235)
T ss_dssp GGGGSSSTTS-BBTTTEEETTTTTT--STTEESEEEEEESSSTEEEEEEES-SGGGHHHHHHHHHHTTBSEEEEESBSEE
T ss_pred CCccCCCCCCCcCcceEEEecCCCC--ccchhhhhhhccccchhhheeecccccccccceehheeeccccceeccccccc
Confidence 8899999999999999999954332 36799999999998899999999999999999999999999999999999999
Q ss_pred ccccccccccCCC--CceeeecEEEEEE-EEE-eecCEEEEEEEEEeCCCC-ceeEEEEEEeCCCCCCCCCCCChhHHHH
Q psy8773 832 RTRIKCDQYWPSR--GTETYGHITVTLQ-DVQ-ELASYCIRTFMINKGADS-ERREIKQLQFTAWPDHGVPEHPAPFLLF 906 (1773)
Q Consensus 832 ~gk~KC~qYWP~~--~~~~yG~~tVtl~-~~~-~~~~yiiRtl~V~~~~~~-~~R~V~hfhyt~WPD~gVP~s~~~lL~f 906 (1773)
.+..+|.+|||.+ +...+|.++|++. +.. ....+++|+|.|+....+ .++.++||||.+||++++|.+...+++|
T Consensus 79 ~~~~~~~~y~P~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~~l~v~~~~~~~~~~~v~~~~~~~W~~~~~P~~~~~~~~~ 158 (235)
T PF00102_consen 79 SGDEKCDQYWPLKEGESLKFGDYTVKCKEKIEENSKHYTVRKLEVTNGKSKKKSRTVTHFHYTNWPDDGVPPSPESFLDF 158 (235)
T ss_dssp TTEESS--TSTSSSSSEEEETTEEEEEEEEEEEEESSEEEEEEEEEETTTTEEEEEEEEEEEESSSSSSSGSSSHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccceEEeeccccccccccccccccceeeeeccccccccccchhhhh
Confidence 9999999999944 3458999999999 665 678999999999998776 3899999999999999999999999999
Q ss_pred HHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHHHHHhhCCCcchHHHHHHHHhccccccCChhhhh
Q psy8773 907 LRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYM 986 (1773)
Q Consensus 907 l~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~VDVf~~Vk~LR~QR~~mVQT~eQY~ 986 (1773)
++.+++.... ..+||+|||++|+||||+||+++++++++..++.+||.++++.||+||+++|++.+||.
T Consensus 159 ~~~v~~~~~~-----------~~~pivVhc~~G~gRsg~f~~~~~~~~~~~~~~~~~v~~~~~~lR~~R~~~i~~~~qy~ 227 (235)
T PF00102_consen 159 IRKVNKSKDD-----------PNGPIVVHCSDGVGRSGTFCAIDILIEQLKKEGEVDVFEIVKKLRQQRPGAIQSPEQYR 227 (235)
T ss_dssp HHHHHHHHST-----------TSSEEEEESSSSSHHHHHHHHHHHHHHHHHHHSEECHHHHHHHHHTTSTTSSSSHHHHH
T ss_pred hhhccccccC-----------CccceEeecccccccccccccchhhccccccccchhhHHHHHHHHhhCCCccCCHHHHH
Confidence 9999987622 26899999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHH
Q psy8773 987 FIHDALLE 994 (1773)
Q Consensus 987 FiY~aLlE 994 (1773)
|||++++|
T Consensus 228 f~~~~~~e 235 (235)
T PF00102_consen 228 FCYMAVLE 235 (235)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhC
Confidence 99999997
No 28
>COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-50 Score=444.41 Aligned_cols=238 Identities=38% Similarity=0.647 Sum_probs=197.6
Q ss_pred CcccccchhhhhhcccccccccccCCceeEeeccCCCCCCCceeeEeccCcCCCCceEEecCCCCCChhhhhhheeecCC
Q psy8773 741 QFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINANYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRS 820 (1773)
Q Consensus 741 ~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~Ls~~~g~~~sDYINASyIdGy~~~~~yIaTQgPL~~Tv~DFWrMVwE~~v 820 (1773)
..+++.+..+.|-.||||.||+||++|||.|...+ ..+||||||||+... ..|||||||+++|++|||.|||+...
T Consensus 42 ~ws~~~sls~~~~~rNRYsnIvPYe~tRV~Lk~~k--~~~DYINAS~ik~~~--~~yIAtQgP~~~t~ddFW~mvw~n~~ 117 (302)
T COG5599 42 RWSDDTSLSSTNYARNRYSNIVPYEHTRVHLKYGK--SINDYINASYIKTPR--GKYIATQGPKPETIDDFWKMVWHNVP 117 (302)
T ss_pred ccccccccCccccccccccccccccCceeeccCCC--chhhcccceeeecCC--CceEEecCCCCchHHHHHHHHHhcCC
Confidence 34556677888999999999999999999998753 468999999999766 45999999999999999999999988
Q ss_pred --cEEEEccCcccccccccccccCCC--CceeeecEEEEEEEEEee--cCEEEEEEEEEeCCCCceeEEEEEEeCCCCCC
Q psy8773 821 --VTIVMMTKLEERTRIKCDQYWPSR--GTETYGHITVTLQDVQEL--ASYCIRTFMINKGADSERREIKQLQFTAWPDH 894 (1773)
Q Consensus 821 --~vIVMLt~l~E~gk~KC~qYWP~~--~~~~yG~~tVtl~~~~~~--~~yiiRtl~V~~~~~~~~R~V~hfhyt~WPD~ 894 (1773)
.+||||+++.|.+++||.+|||.. ....+|..-+.-++.+.. ..+.+|.|+++... +..+.|.||+|.+|+|.
T Consensus 118 ~~gvIVmLt~l~E~~rekc~qYWp~~~~~~~~~G~~v~~~~~~e~~~d~~~~~~~f~L~~~~-~~~k~Ihhf~y~nW~D~ 196 (302)
T COG5599 118 NNGVIVMLTSLPEYNREKCDQYWPLGYDDTLIIGLRVIKQKKYELFNDNIVNVHNFELTSIN-GPPKKIHHFQYINWVDF 196 (302)
T ss_pred CceEEEEecChHHHhHHHHhhhCCCCcCcceeeeeEEEEEecccccccceeeeeecccccCC-CCccEEEEEEecCcccc
Confidence 999999999999999999999954 234678544444434433 34668889998754 78899999999999999
Q ss_pred CCCCCChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHHHHHhhC--------CCcc-hH
Q psy8773 895 GVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHD--------KTVD-IY 965 (1773)
Q Consensus 895 gVP~s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lLeql~~e--------~~VD-Vf 965 (1773)
++| +...+.++++.+.... ...+|++|||||||||||||||+|.++++.... ...| ||
T Consensus 197 ~~p-~i~sl~~~~~sl~~sp------------~~t~piiVHCSAGvGRTGTFIalD~ll~~~~~~~~~t~~~~~t~D~if 263 (302)
T COG5599 197 NVP-DIRSLTEVIHSLNDSP------------VRTGPIIVHCSAGVGRTGTFIALDILLRMPNDTLNHTDTWEDTQDLIF 263 (302)
T ss_pred CCc-CHHHHHHHHHHhhcCc------------CCCCCEEEEeccCCCCcceeeeHHHHHhccccccCCCchhhhhhhHHH
Confidence 999 5555555555544321 026899999999999999999999999988654 3334 89
Q ss_pred HHHHHHHhccccccCChhhhhhHHHHHHHHH
Q psy8773 966 GHVTCLRAQRNYMVQTEDQYMFIHDALLEAV 996 (1773)
Q Consensus 966 ~~Vk~LR~QR~~mVQT~eQY~FiY~aLlEyl 996 (1773)
++|..||+||+.|||+.+||.|||++++++.
T Consensus 264 ~iV~~LRsQRmkmVQn~~Qf~flY~~~~~l~ 294 (302)
T COG5599 264 QIVLSLRSQRMKMVQNKTQFKFLYDAFLELN 294 (302)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987
No 29
>PRK15375 pathogenicity island 1 effector protein StpP; Provisional
Probab=100.00 E-value=4.7e-48 Score=461.71 Aligned_cols=272 Identities=19% Similarity=0.297 Sum_probs=218.6
Q ss_pred cHHHHHHHHHHHhh--CCchhHHHHHhhcCCCCcccccccccccccccCCCCCCCCCCCcceEecCCCCCCCCCeEEeee
Q psy8773 199 PISRLAQHIENLKA--NDNLKFSQEYESIEPGQQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINANY 276 (1773)
Q Consensus 199 ~~~~~~~~v~~l~a--~~~~~f~~Efe~I~~~~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~L~~~~~~~~sDYINANy 276 (1773)
+-++|.+...+++. ..-..+..|-+.+..|...+...+-..--.++---.+|+|||||||+|+. ++||||||
T Consensus 254 s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~ag~p~~~~~~~~~~~~~~~~~~~I~~~~~TrV~ls~------g~yI~ANy 327 (535)
T PRK15375 254 STHELTQAVKKIHVIAKELKNVTAELEKIEAGAPMPQTMSGPTLGLARFAVSSIPINQQTQVKLSD------GMPVPVNT 327 (535)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccCCccchhhHHHhcccCccccceEEcCC------CCccccce
Confidence 33455555555542 22234556778887777666666555555555666899999999999964 78999999
Q ss_pred cCCCCCcccEEEeCCCCc--CCHHHHHHHHHHcCCcEEEEcccccccCcccccccCCCCCCceeeeEEEEEEEEEEe-cc
Q psy8773 277 CDGYRKHNAYVATQGPLQ--ETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRGTETYGHITVTLQDVQEL-AS 353 (1773)
Q Consensus 277 I~G~~~~~kyIaTQgPl~--~Tv~DFWrMVWEq~v~iIVMLT~l~E~gr~KC~qYWP~~~~~~yG~~~Vt~~~~~~~-~~ 353 (1773)
|+ +..++++|++|+|+. +|++|||+||||++|.+|||||+..|.++.+|.+||+ +..+||+|+|++.+++.. .+
T Consensus 328 I~-~~~k~~aIa~QYP~nt~eTieDFWrMVWEn~~~VIVMLT~l~E~g~~KC~pYW~--~s~tYGdItVts~seesls~g 404 (535)
T PRK15375 328 LT-FDGKPVALAGSYPKNTPDALEAHMKMLLEKECSCLVVLTSEDQMQAKQLPPYFR--GSYTFGEVHTNSQKVSSASQG 404 (535)
T ss_pred ee-ecCccceEeccCCCCchhhHHHHHHHHHHcCCCEEEEeeccccCcccccCccCC--CcceeccEEEEEEEEEeccCC
Confidence 99 888899999999975 8999999999999999999999999999999999996 457899999999988876 46
Q ss_pred eEEEEEEEeeCCCCceEEEEEEEecCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCce
Q psy8773 354 YCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTG 433 (1773)
Q Consensus 354 y~iRtf~I~~~~~~esR~V~hfhYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTG 433 (1773)
+++|.|.+........+.|.||||++|||||+|.++..++.|++.|+..+....... . ....+++|||||||+||||
T Consensus 405 ~iIR~f~L~Ik~~E~R~tV~QFHyTnWPDHGVPpST~~LleLvr~Vr~~~q~~~~~~-~--~~nk~~PVVHCSAGVGRTG 481 (535)
T PRK15375 405 EAIDQYNMQLSCGEKRYTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGR-S--SSDKHLPMIHCLGGVGRTG 481 (535)
T ss_pred ceEEEEEEEEecCCceeEEEEEEeCCCCCCCCCCChHHHHHHHHHHHHhhhcccccc-c--ccCCCCceEEcCCCCchHH
Confidence 888888776655455568999999999999999988889999999988643210000 0 0112344899999999999
Q ss_pred eehhHHHHHHHHhcCCccCHHHHHHHHHHhccc-CCCCHHHHHHHHHHHHHHHH
Q psy8773 434 CFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNY-MVQTEDQYMFIHDALLEAVL 486 (1773)
Q Consensus 434 tFIaID~ll~~l~~e~~VdV~~iV~~LR~qR~~-mVQT~eQY~FIy~aLlE~i~ 486 (1773)
||||++. +..+..+||.++|..||.+|++ ||||.+||.|++..-...++
T Consensus 482 TFIAi~l----lk~~~~~sle~IV~dlR~qRng~MVQt~eQy~~l~~~~~~~~~ 531 (535)
T PRK15375 482 TMAAALV----LKDNPHSNLEQVRADFRNSRNNRMLEDASQFVQLKAMQAQLLM 531 (535)
T ss_pred HHHHHHH----HhccccCCHHHHHHHHHhcCCccccccHHHHHHHHHHHHHHhh
Confidence 9999976 3555789999999999999999 99999999999998777665
No 30
>PRK15375 pathogenicity island 1 effector protein StpP; Provisional
Probab=100.00 E-value=9.1e-46 Score=442.17 Aligned_cols=226 Identities=19% Similarity=0.311 Sum_probs=191.2
Q ss_pred ccccccccCCceeEeeccCCCCCCCceeeEeccCcCCCCceEEecCCCC--CChhhhhhheeecCCcEEEEccCcccccc
Q psy8773 757 RYANVIAYDHSRVILSTVDGIPGSDYINANYCDGYRKHNAYVATQGPLQ--ETLGDFWRMVWELRSVTIVMMTKLEERTR 834 (1773)
Q Consensus 757 RY~nIlpyD~SRV~Ls~~~g~~~sDYINASyIdGy~~~~~yIaTQgPL~--~Tv~DFWrMVwE~~v~vIVMLt~l~E~gk 834 (1773)
--.||+|+|||||+|+. ++|||||||+ +..++.+|++|.|+. +|++|||+||||++|.+|||||+..|.++
T Consensus 303 ~~~~I~~~~~TrV~ls~------g~yI~ANyI~-~~~k~~aIa~QYP~nt~eTieDFWrMVWEn~~~VIVMLT~l~E~g~ 375 (535)
T PRK15375 303 AVSSIPINQQTQVKLSD------GMPVPVNTLT-FDGKPVALAGSYPKNTPDALEAHMKMLLEKECSCLVVLTSEDQMQA 375 (535)
T ss_pred HhcccCccccceEEcCC------CCccccceee-ecCccceEeccCCCCchhhHHHHHHHHHHcCCCEEEEeeccccCcc
Confidence 34699999999999953 7899999999 888889999999976 89999999999999999999999999999
Q ss_pred cccccccCCCCceeeecEEEEEEEEEee-cCEEEEEEEEEeCCCCceeEEEEEEeCCCCCCCCCCCChhHHHHHHHHHhh
Q psy8773 835 IKCDQYWPSRGTETYGHITVTLQDVQEL-ASYCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAM 913 (1773)
Q Consensus 835 ~KC~qYWP~~~~~~yG~~tVtl~~~~~~-~~yiiRtl~V~~~~~~~~R~V~hfhyt~WPD~gVP~s~~~lL~fl~~V~~~ 913 (1773)
.+|.+||+ +...||+|+|++.+++.. .++++|.+.+........+.|+||||++|||||+|.++..++.|++.|+..
T Consensus 376 ~KC~pYW~--~s~tYGdItVts~seesls~g~iIR~f~L~Ik~~E~R~tV~QFHyTnWPDHGVPpST~~LleLvr~Vr~~ 453 (535)
T PRK15375 376 KQLPPYFR--GSYTFGEVHTNSQKVSSASQGEAIDQYNMQLSCGEKRYTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNS 453 (535)
T ss_pred cccCccCC--CcceeccEEEEEEEEEeccCCceEEEEEEEEecCCceeEEEEEEeCCCCCCCCCCChHHHHHHHHHHHHh
Confidence 99999996 567899999999988775 468888887765544455689999999999999999888899999999876
Q ss_pred CCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHHHHHhhCCCcchHHHHHHHHhcccc-ccCChhhhhhHHHHH
Q psy8773 914 NPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNY-MVQTEDQYMFIHDAL 992 (1773)
Q Consensus 914 ~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~VDVf~~Vk~LR~QR~~-mVQT~eQY~FiY~aL 992 (1773)
+..... . .......+| |||||||+||||||||++. ++.+..+||.++|+.||.||++ |||+.+||.++++.-
T Consensus 454 ~q~~~~-~-~~~~nk~~P-VVHCSAGVGRTGTFIAi~l----lk~~~~~sle~IV~dlR~qRng~MVQt~eQy~~l~~~~ 526 (535)
T PRK15375 454 NQNGAP-G-RSSSDKHLP-MIHCLGGVGRTGTMAAALV----LKDNPHSNLEQVRADFRNSRNNRMLEDASQFVQLKAMQ 526 (535)
T ss_pred hhcccc-c-ccccCCCCc-eEEcCCCCchHHHHHHHHH----HhccccCCHHHHHHHHHhcCCccccccHHHHHHHHHHH
Confidence 432100 0 000011245 8999999999999999976 3555789999999999999999 999999999999988
Q ss_pred HHHHHc
Q psy8773 993 LEAVLC 998 (1773)
Q Consensus 993 lEyl~~ 998 (1773)
...++.
T Consensus 527 ~~~~~~ 532 (535)
T PRK15375 527 AQLLMT 532 (535)
T ss_pred HHHhhh
Confidence 877763
No 31
>KOG0789|consensus
Probab=100.00 E-value=6.7e-44 Score=434.57 Aligned_cols=271 Identities=26% Similarity=0.417 Sum_probs=211.3
Q ss_pred HHHHHHHHHhhCCchhHHHHHhhcCCCCcccccccccccccccCCCCCCCCCCCcceEecCCCCCCCCCeEEeeecCCCC
Q psy8773 202 RLAQHIENLKANDNLKFSQEYESIEPGQQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGSDYINANYCDGYR 281 (1773)
Q Consensus 202 ~~~~~v~~l~a~~~~~f~~Efe~I~~~~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~L~~~~~~~~sDYINANyI~G~~ 281 (1773)
.+..++..........+..+|..................|..||||.||.|||++||+|.... ..||||||||+++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kNr~~dv~~~d~~rV~l~~~~---~~dyI~A~~v~~~~ 164 (415)
T KOG0789|consen 88 FAIDWVQSLLYSLIVEMFKQFRSNKVEKESSHLCDAFLKNMDKNRYSDVQCLDHTRVKLKPPQ---DKDYIHASKIYFPK 164 (415)
T ss_pred HHHHHHHhhhccccHHHHHHHHHhhccCCcchhhhhhhccccccccCCcCcccCCeeecCCCC---CcccchhhccCCcC
Confidence 344445555455555666777766533222123456678888999999999999999998643 57999999999976
Q ss_pred CcccEEEeCCCCcCCHHHHHHHHHHcCCcEEEEcccccccCcccccccCCCCCC--ceeeeEEEEEEEE---EEe---cc
Q psy8773 282 KHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRGT--ETYGHITVTLQDV---QEL---AS 353 (1773)
Q Consensus 282 ~~~kyIaTQgPl~~Tv~DFWrMVWEq~v~iIVMLT~l~E~gr~KC~qYWP~~~~--~~yG~~~Vt~~~~---~~~---~~ 353 (1773)
..+.||+||||+++|.+|||+||||+++..|||||+..|.|+.+|.+|||.+.+ ..||.+..++... ... ..
T Consensus 165 ~~~~~I~tQ~Pl~~t~~dFW~mv~~~k~~~Ivml~~~~E~~~~kc~~Y~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (415)
T KOG0789|consen 165 GPRTAILTQAPLSKTTEDFWRMVFEEKVESVVLLCSDEELGAAECASYFPSKRGVKLTFLEFGKKFVENRKVEMKQQDQT 244 (415)
T ss_pred CCcCceecCCCCcccHHHHHHHHHHcCCCEEEEecchhhccHHHHhhcCcccCCCeeeecccceeEEEeeeeeccccccc
Confidence 348999999999999999999999999999999999999999999999999763 3566664443332 221 23
Q ss_pred eEEEEEEEee-CCCCceEEEEEEEecCCCCCCCCCChHHHHHHHHH-HHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCC
Q psy8773 354 YCIRTFMINK-GADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRR-VRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGR 431 (1773)
Q Consensus 354 y~iRtf~I~~-~~~~esR~V~hfhYt~WPD~GVP~~~~~lL~Fi~~-Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGR 431 (1773)
+......+.. .+...++.|.|+||++|||+|+|.+..+++.+++. +..... ..+|++||||||+||
T Consensus 245 ~~~~~~~~~~~~~~~~~~~v~~~~~~~WPd~~~p~~~~~~l~~~~~~~~~~~~------------~~~P~vVhcsaG~gR 312 (415)
T KOG0789|consen 245 STVGLLLLVLPEGLEISSSVVHYHYINWPDHGAPDSVKSILPLLRQSVLELRP------------KQEPIEVHCSAGAGR 312 (415)
T ss_pred ceeeEEEeecCCCccccceEEEEeeCCCccccCCcchHHHHHHHHhhhhhhcC------------CCCCeEEECCCCCCc
Confidence 3333322222 34444579999999999999999999999999876 111111 157999999999999
Q ss_pred ceeehhHHHHHHHHhc-CCccCHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHc
Q psy8773 432 TGCFIVIDAMIERIKH-DKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVLC 487 (1773)
Q Consensus 432 TGtFIaID~ll~~l~~-e~~VdV~~iV~~LR~qR~~mVQT~eQY~FIy~aLlE~i~~ 487 (1773)
||||+++|.++.++.. ....++..++..||.||.++|||..||.|+|+++++++..
T Consensus 313 tgt~v~~~~~~~~~~~~~~~~~~~~~~~~iR~qR~~~vqt~~Qy~f~~~~~~~~~~~ 369 (415)
T KOG0789|consen 313 AGTLVLIEHALIELQGPEGEPPIDEILREIRYQRPGAVQSPLQYLFIYAATLKYIKK 369 (415)
T ss_pred cchHHHHHHHHHHHhcCCCCccHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHH
Confidence 9999999988888754 4567799999999999999999999999999999999986
No 32
>KOG0789|consensus
Probab=100.00 E-value=8.4e-43 Score=424.95 Aligned_cols=271 Identities=27% Similarity=0.448 Sum_probs=210.6
Q ss_pred hhHHHhhhcccccchhHHHHHHHHhcCCcccccccCCCCCCcccccchhhhhhcccccccccccCCceeEeeccCCCCCC
Q psy8773 701 LSIVLERMQYEGVIDLFQTVRILRTQRPAMVQTESIEPGQQFTWDHSSMEMNKAKNRYANVIAYDHSRVILSTVDGIPGS 780 (1773)
Q Consensus 701 ls~vl~~~~~~~~~~~~~~~~~lr~~~~~~~~~e~~~~~~~~t~~~s~~~~N~~KNRY~nIlpyD~SRV~Ls~~~g~~~s 780 (1773)
+..++......++..++..+..+....... ........|..||||.||.|||++||+|.... ..
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~kNr~~dv~~~d~~rV~l~~~~---~~ 152 (415)
T KOG0789|consen 89 AIDWVQSLLYSLIVEMFKQFRSNKVEKESS-------------HLCDAFLKNMDKNRYSDVQCLDHTRVKLKPPQ---DK 152 (415)
T ss_pred HHHHHHhhhccccHHHHHHHHHhhccCCcc-------------hhhhhhhccccccccCCcCcccCCeeecCCCC---Cc
Confidence 334445555566777777776655433221 01235567888999999999999999997543 57
Q ss_pred CceeeEeccCcCCCCceEEecCCCCCChhhhhhheeecCCcEEEEccCcccccccccccccCCCCc--eeeecEEEEEEE
Q psy8773 781 DYINANYCDGYRKHNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRGT--ETYGHITVTLQD 858 (1773)
Q Consensus 781 DYINASyIdGy~~~~~yIaTQgPL~~Tv~DFWrMVwE~~v~vIVMLt~l~E~gk~KC~qYWP~~~~--~~yG~~tVtl~~ 858 (1773)
||||||||+++...+.||+||||+++|.+|||+||||+++..|||||+..|.|+.+|.+|||...+ ..||.+..++..
T Consensus 153 dyI~A~~v~~~~~~~~~I~tQ~Pl~~t~~dFW~mv~~~k~~~Ivml~~~~E~~~~kc~~Y~P~~~~~~~~~~~~~~~~~~ 232 (415)
T KOG0789|consen 153 DYIHASKIYFPKGPRTAILTQAPLSKTTEDFWRMVFEEKVESVVLLCSDEELGAAECASYFPSKRGVKLTFLEFGKKFVE 232 (415)
T ss_pred ccchhhccCCcCCCcCceecCCCCcccHHHHHHHHHHcCCCEEEEecchhhccHHHHhhcCcccCCCeeeecccceeEEE
Confidence 999999999986448999999999999999999999999999999999999999999999998752 356665444333
Q ss_pred EEe--e----cCEEEEEEEEEe-CCCCceeEEEEEEeCCCCCCCCCCCChhHHHHHHH-HHhhCCCCCCCcCCCCCCCCC
Q psy8773 859 VQE--L----ASYCIRTFMINK-GADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRR-VRAMNPGTNSLESSGVNLPVG 930 (1773)
Q Consensus 859 ~~~--~----~~yiiRtl~V~~-~~~~~~R~V~hfhyt~WPD~gVP~s~~~lL~fl~~-V~~~~~~~~~~~~~~~~~~~g 930 (1773)
... . ..+....+.+.. .+...++.|.|+||++|||+|+|.+..+++.+++. +...+. ..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~WPd~~~p~~~~~~l~~~~~~~~~~~~------------~~~ 300 (415)
T KOG0789|consen 233 NRKVEMKQQDQTSTVGLLLLVLPEGLEISSSVVHYHYINWPDHGAPDSVKSILPLLRQSVLELRP------------KQE 300 (415)
T ss_pred eeeeecccccccceeeEEEeecCCCccccceEEEEeeCCCccccCCcchHHHHHHHHhhhhhhcC------------CCC
Confidence 222 1 223333322222 33344579999999999999999999999999876 111111 258
Q ss_pred CEEEEcCCCCccchhHhHHHHHHHHHhh-CCCcchHHHHHHHHhccccccCChhhhhhHHHHHHHHHHcC
Q psy8773 931 PLIVHCSAGVGRTGCFIVIDAMIERIKH-DKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVLCG 999 (1773)
Q Consensus 931 PIVVHCSaGVGRTGtFIAId~lLeql~~-e~~VDVf~~Vk~LR~QR~~mVQT~eQY~FiY~aLlEyl~~g 999 (1773)
|++||||+|+||||||++++.++.++.. +...|+..+++.+|.||+++|||..||.|+|+++++|+...
T Consensus 301 P~vVhcsaG~gRtgt~v~~~~~~~~~~~~~~~~~~~~~~~~iR~qR~~~vqt~~Qy~f~~~~~~~~~~~~ 370 (415)
T KOG0789|consen 301 PIEVHCSAGAGRAGTLVLIEHALIELQGPEGEPPIDEILREIRYQRPGAVQSPLQYLFIYAATLKYIKKV 370 (415)
T ss_pred CeEEECCCCCCccchHHHHHHHHHHHhcCCCCccHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHc
Confidence 9999999999999999999988888754 46678999999999999999999999999999999999873
No 33
>smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif.
Probab=99.83 E-value=2.8e-20 Score=183.33 Aligned_cols=104 Identities=46% Similarity=0.871 Sum_probs=96.6
Q ss_pred EEeeEEecCCCCCCCCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHhhccc-CCcCHHHHHH
Q psy8773 1551 TLRQFQLIDWPEQGVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYE-GVIDLFQTVR 1629 (1773)
Q Consensus 1551 ~V~qfQ~~~WPd~gvP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E-~~VDVFQtVK 1629 (1773)
.+.||||++||++++|.+...+++++..+.+.......++||+|||++|.||||+|||++++++++..+ +.+|++++++
T Consensus 1 ~~~~~~~~~Wpd~~~P~~~~~~~~~~~~v~~~~~~~~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (105)
T smart00404 1 TVKHYHYTGWPDHGVPESPDSILEFLRAVKKNLNQSSSSGPVVVHCSAGVGRTGTFVALDILLQQLESETGEVDIFQTVK 80 (105)
T ss_pred CeEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 378999999999999999999999999999887654447899999999999999999999999999988 8999999999
Q ss_pred HHHhcCCCCCCChhhhccccHHHHHHHH
Q psy8773 1630 ILRTQRPAMVQTEHLYTSSPFSEQLALD 1657 (1773)
Q Consensus 1630 ~lR~~RPgmVqT~eQY~~~~f~Y~~~~e 1657 (1773)
.+|.+||+++++.+||. |||+++++
T Consensus 81 ~ir~~r~~~~~~~~q~~---~~~~~~~~ 105 (105)
T smart00404 81 ELRKQRPGMVQTFEQYL---FLYRALLE 105 (105)
T ss_pred HHHhhhhhhCCcHHHHH---HHHHHHhC
Confidence 99999999999999999 99999863
No 34
>smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity. Protein tyrosine phosphatases. Homologues detected by this profile and not by those of "PTPc" or "DSPc" are predicted to be protein phosphatases with a similar fold to DSPs and PTPs, yet with unpredicted specificities.
Probab=99.83 E-value=2.8e-20 Score=183.33 Aligned_cols=104 Identities=46% Similarity=0.871 Sum_probs=96.6
Q ss_pred EEeeEEecCCCCCCCCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHhhccc-CCcCHHHHHH
Q psy8773 1551 TLRQFQLIDWPEQGVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYE-GVIDLFQTVR 1629 (1773)
Q Consensus 1551 ~V~qfQ~~~WPd~gvP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E-~~VDVFQtVK 1629 (1773)
.+.||||++||++++|.+...+++++..+.+.......++||+|||++|.||||+|||++++++++..+ +.+|++++++
T Consensus 1 ~~~~~~~~~Wpd~~~P~~~~~~~~~~~~v~~~~~~~~~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (105)
T smart00012 1 TVKHYHYTGWPDHGVPESPDSILEFLRAVKKNLNQSSSSGPVVVHCSAGVGRTGTFVALDILLQQLESETGEVDIFQTVK 80 (105)
T ss_pred CeEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 378999999999999999999999999999887654447899999999999999999999999999988 8999999999
Q ss_pred HHHhcCCCCCCChhhhccccHHHHHHHH
Q psy8773 1630 ILRTQRPAMVQTEHLYTSSPFSEQLALD 1657 (1773)
Q Consensus 1630 ~lR~~RPgmVqT~eQY~~~~f~Y~~~~e 1657 (1773)
.+|.+||+++++.+||. |||+++++
T Consensus 81 ~ir~~r~~~~~~~~q~~---~~~~~~~~ 105 (105)
T smart00012 81 ELRKQRPGMVQTFEQYL---FLYRALLE 105 (105)
T ss_pred HHHhhhhhhCCcHHHHH---HHHHHHhC
Confidence 99999999999999999 99999863
No 35
>smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity. Protein tyrosine phosphatases. Homologues detected by this profile and not by those of "PTPc" or "DSPc" are predicted to be protein phosphatases with a similar fold to DSPs and PTPs, yet with unpredicted specificities.
Probab=99.81 E-value=7e-20 Score=180.45 Aligned_cols=104 Identities=48% Similarity=0.880 Sum_probs=94.5
Q ss_pred EEEEEEecCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCceeehhHHHHHHHHhcC-C
Q psy8773 371 EIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHD-K 449 (1773)
Q Consensus 371 ~V~hfhYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTGtFIaID~ll~~l~~e-~ 449 (1773)
.+.||||++|||+++|..+..+++|++.+++...... ..+||+|||++|+||||+||+++.++.++..+ .
T Consensus 1 ~~~~~~~~~Wpd~~~P~~~~~~~~~~~~v~~~~~~~~---------~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~ 71 (105)
T smart00012 1 TVKHYHYTGWPDHGVPESPDSILEFLRAVKKNLNQSS---------SSGPVVVHCSAGVGRTGTFVALDILLQQLESETG 71 (105)
T ss_pred CeEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHHHhcC---------CCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCC
Confidence 3789999999999999999999999999988754321 15799999999999999999999999999888 7
Q ss_pred ccCHHHHHHHHHHhcccCCCCHHHHHHHHHHHHH
Q psy8773 450 TVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLE 483 (1773)
Q Consensus 450 ~VdV~~iV~~LR~qR~~mVQT~eQY~FIy~aLlE 483 (1773)
.+++.+++..+|++|++++++.+||.|+|.++++
T Consensus 72 ~~~~~~~~~~ir~~r~~~~~~~~q~~~~~~~~~~ 105 (105)
T smart00012 72 EVDIFQTVKELRKQRPGMVQTFEQYLFLYRALLE 105 (105)
T ss_pred CCCHHHHHHHHHhhhhhhCCcHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999874
No 36
>smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif.
Probab=99.81 E-value=7e-20 Score=180.45 Aligned_cols=104 Identities=48% Similarity=0.880 Sum_probs=94.5
Q ss_pred EEEEEEecCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCceeehhHHHHHHHHhcC-C
Q psy8773 371 EIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHD-K 449 (1773)
Q Consensus 371 ~V~hfhYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTGtFIaID~ll~~l~~e-~ 449 (1773)
.+.||||++|||+++|..+..+++|++.+++...... ..+||+|||++|+||||+||+++.++.++..+ .
T Consensus 1 ~~~~~~~~~Wpd~~~P~~~~~~~~~~~~v~~~~~~~~---------~~~pvlVHC~~G~gRtg~~~~~~~~~~~~~~~~~ 71 (105)
T smart00404 1 TVKHYHYTGWPDHGVPESPDSILEFLRAVKKNLNQSS---------SSGPVVVHCSAGVGRTGTFVALDILLQQLESETG 71 (105)
T ss_pred CeEEEeeCCCCCCCCCCCHHHHHHHHHHHHHHHHhcC---------CCCCEEEEeCCCCChhhHHHHHHHHHHHHHhcCC
Confidence 3789999999999999999999999999988754321 15799999999999999999999999999888 7
Q ss_pred ccCHHHHHHHHHHhcccCCCCHHHHHHHHHHHHH
Q psy8773 450 TVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLE 483 (1773)
Q Consensus 450 ~VdV~~iV~~LR~qR~~mVQT~eQY~FIy~aLlE 483 (1773)
.+++.+++..+|++|++++++.+||.|+|.++++
T Consensus 72 ~~~~~~~~~~ir~~r~~~~~~~~q~~~~~~~~~~ 105 (105)
T smart00404 72 EVDIFQTVKELRKQRPGMVQTFEQYLFLYRALLE 105 (105)
T ss_pred CCCHHHHHHHHHhhhhhhCCcHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999874
No 37
>PTZ00242 protein tyrosine phosphatase; Provisional
Probab=99.52 E-value=6.5e-14 Score=152.41 Aligned_cols=95 Identities=21% Similarity=0.448 Sum_probs=71.3
Q ss_pred eeEEecCCCC-CCCCCChhhHHHHHHHHHHHhhh-cCCCCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHHHH
Q psy8773 1553 RQFQLIDWPE-QGVPKSGDGFIDFIGQVHKTKEQ-FGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRI 1630 (1773)
Q Consensus 1553 ~qfQ~~~WPd-~gvP~s~~~lidlI~~V~k~q~~-~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtVK~ 1630 (1773)
.+++|.+||. ++.|++.+.+.++++.+.+.... ...++||+|||.+|+||||+|||++++.. +.+++.++++.
T Consensus 60 ~gi~~~~~p~~D~~~P~~~~i~~~~~~i~~~~~~~~~~g~~V~VHC~aGigRSgt~~a~yL~~~-----~~~s~~eAi~~ 134 (166)
T PTZ00242 60 NGIEVHDWPFDDGAPPPKAVIDNWLRLLDQEFAKQSTPPETIAVHCVAGLGRAPILVALALVEY-----GGMEPLDAVGF 134 (166)
T ss_pred CCCEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCeEEEECCCCCCHHHHHHHHHHHHh-----CCCCHHHHHHH
Confidence 4567778883 56666665555555555544322 23478999999999999999999997543 35799999999
Q ss_pred HHhcCCCCCCChhhhccccHHHHHHH
Q psy8773 1631 LRTQRPAMVQTEHLYTSSPFSEQLAL 1656 (1773)
Q Consensus 1631 lR~~RPgmVqT~eQY~~~~f~Y~~~~ 1656 (1773)
+|.+||+++ +.+|+. |+.+...
T Consensus 135 vr~~R~~~i-~~~Q~~---~l~~~~~ 156 (166)
T PTZ00242 135 VREKRKGAI-NQTQLQ---FLKKYKP 156 (166)
T ss_pred HHHHCCCCc-hHHHHH---HHHHHHH
Confidence 999999999 589999 7766553
No 38
>PTZ00242 protein tyrosine phosphatase; Provisional
Probab=99.34 E-value=2.9e-12 Score=139.65 Aligned_cols=136 Identities=18% Similarity=0.323 Sum_probs=98.7
Q ss_pred ccEEEeCCCCcCCHHHHHHHHHHcCCcEEEEcccccccCcccccccCCCCCCceeeeEEEEEEEEEEecceEEEEEEEee
Q psy8773 284 NAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRGTETYGHITVTLQDVQELASYCIRTFMINK 363 (1773)
Q Consensus 284 ~kyIaTQgPl~~Tv~DFWrMVWEq~v~iIVMLT~l~E~gr~KC~qYWP~~~~~~yG~~~Vt~~~~~~~~~y~iRtf~I~~ 363 (1773)
-+||++-+|+++++.+|....-+.++..||.++.. +|+.+
T Consensus 16 ~r~~~~~~P~~~~~~~~l~~L~~~gI~~Iv~l~~~----------~~~~~------------------------------ 55 (166)
T PTZ00242 16 FKFLILDAPSPSNLPLYIKELQRYNVTHLVRVCGP----------TYDAE------------------------------ 55 (166)
T ss_pred eEEEEecCCCcccHHHHHHHHHhCCCeEEEecCCC----------CCCHH------------------------------
Confidence 36999999999999999999999999999988641 22110
Q ss_pred CCCCceEEEEEEEecCCC--CCCCCCCh--HHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCceeehhHH
Q psy8773 364 GADSERREIKQLQFTAWP--DHGVPEHP--APFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVID 439 (1773)
Q Consensus 364 ~~~~esR~V~hfhYt~WP--D~GVP~~~--~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTGtFIaID 439 (1773)
.....+++|..|| |+++|... ..+++|+..+..... ...+||+|||.||+||||+||++.
T Consensus 56 -----~~~~~gi~~~~~p~~D~~~P~~~~i~~~~~~i~~~~~~~~-----------~~g~~V~VHC~aGigRSgt~~a~y 119 (166)
T PTZ00242 56 -----LLEKNGIEVHDWPFDDGAPPPKAVIDNWLRLLDQEFAKQS-----------TPPETIAVHCVAGLGRAPILVALA 119 (166)
T ss_pred -----HHHHCCCEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhc-----------cCCCeEEEECCCCCCHHHHHHHHH
Confidence 0112334455555 77777432 345555555443211 125799999999999999999986
Q ss_pred HHHHHHhcCCccCHHHHHHHHHHhcccCCCCHHHHHHHHHHH
Q psy8773 440 AMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDAL 481 (1773)
Q Consensus 440 ~ll~~l~~e~~VdV~~iV~~LR~qR~~mVQT~eQY~FIy~aL 481 (1773)
.+ +. +.+++.+.+..+|++|++++ +..|+.|+.+..
T Consensus 120 L~----~~-~~~s~~eAi~~vr~~R~~~i-~~~Q~~~l~~~~ 155 (166)
T PTZ00242 120 LV----EY-GGMEPLDAVGFVREKRKGAI-NQTQLQFLKKYK 155 (166)
T ss_pred HH----Hh-CCCCHHHHHHHHHHHCCCCc-hHHHHHHHHHHH
Confidence 32 22 35799999999999999999 589999997754
No 39
>KOG2836|consensus
Probab=99.32 E-value=7.5e-12 Score=127.62 Aligned_cols=87 Identities=25% Similarity=0.555 Sum_probs=76.0
Q ss_pred EeeEEecCCC-CCCCCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHHHH
Q psy8773 1552 LRQFQLIDWP-EQGVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRI 1630 (1773)
Q Consensus 1552 V~qfQ~~~WP-d~gvP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtVK~ 1630 (1773)
-..++..+|| ++|.|++.+-+-+++..|....++.+ +..|.|||.+|+||+.+++|+.++...||+|++ |.+
T Consensus 60 k~GI~Vldw~f~dg~ppp~qvv~~w~~l~~~~f~e~p-~~cvavhcvaglgrapvlvalalie~gmkyeda------ve~ 132 (173)
T KOG2836|consen 60 KEGITVLDWPFDDGAPPPNQVVDDWLSLVKTKFREEP-GCCVAVHCVAGLGRAPVLVALALIEAGMKYEDA------VEM 132 (173)
T ss_pred hcCceEeecccccCCCCchHHHHHHHHHHHHHHhhCC-CCeEEEEeecccCcchHHHHHHHHHccccHHHH------HHH
Confidence 3456778999 89999999888899998887777755 778999999999999999999999999999975 889
Q ss_pred HHhcCCCCCCChhhhc
Q psy8773 1631 LRTQRPAMVQTEHLYT 1646 (1773)
Q Consensus 1631 lR~~RPgmVqT~eQY~ 1646 (1773)
+|.+|.|++++. |..
T Consensus 133 ir~krrga~n~k-ql~ 147 (173)
T KOG2836|consen 133 IRQKRRGAINSK-QLL 147 (173)
T ss_pred HHHHhhccccHH-HHH
Confidence 999999999984 555
No 40
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=99.24 E-value=4e-11 Score=135.63 Aligned_cols=85 Identities=20% Similarity=0.454 Sum_probs=64.1
Q ss_pred cCCCCCCCCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHHHHHHhcCCC
Q psy8773 1558 IDWPEQGVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRILRTQRPA 1637 (1773)
Q Consensus 1558 ~~WPd~gvP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtVK~lR~~RPg 1637 (1773)
..|||.++|+ .+.+.+++..+++... .+++|+|||.+|.||||+++|++++.. | ++.-++++.+|..|||
T Consensus 143 lpipDg~aPs-~~~i~~~l~~i~~~l~---~g~~VaVHC~AGlGRTGtl~AayLI~~-----G-mspeeAI~~VR~~RPg 212 (241)
T PTZ00393 143 LIFPDGDAPT-VDIVSNWLTIVNNVIK---NNRAVAVHCVAGLGRAPVLASIVLIEF-----G-MDPIDAIVFIRDRRKG 212 (241)
T ss_pred eecCCCCCCC-HHHHHHHHHHHHHHHh---cCCeEEEECCCCCCHHHHHHHHHHHHc-----C-CCHHHHHHHHHHHCCC
Confidence 4566766665 4445556666654433 267999999999999999999988642 3 6888999999999999
Q ss_pred CCCChhhhccccHHHHHHH
Q psy8773 1638 MVQTEHLYTSSPFSEQLAL 1656 (1773)
Q Consensus 1638 mVqT~eQY~~~~f~Y~~~~ 1656 (1773)
+++ ..|++ |+.+...
T Consensus 213 AIn-~~Q~~---fL~~y~~ 227 (241)
T PTZ00393 213 AIN-KRQLQ---FLKAYKK 227 (241)
T ss_pred CCC-HHHHH---HHHHHHH
Confidence 995 78999 6655544
No 41
>KOG1720|consensus
Probab=99.08 E-value=5.4e-10 Score=122.73 Aligned_cols=103 Identities=23% Similarity=0.277 Sum_probs=80.0
Q ss_pred ecCCC-CCCCCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHHHHHHhcC
Q psy8773 1557 LIDWP-EQGVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRILRTQR 1635 (1773)
Q Consensus 1557 ~~~WP-d~gvP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtVK~lR~~R 1635 (1773)
..+-| .||.+++...+.++|+.|....+ .|.|.|||-+|.||||+++|++++.+. -+-.=|+|..||..|
T Consensus 118 h~~l~f~Dg~tP~~~~v~~fv~i~e~~~~----~g~iaVHCkaGlGRTG~liAc~lmy~~-----g~ta~eaI~~lR~~R 188 (225)
T KOG1720|consen 118 HHDLFFADGSTPTDAIVKEFVKIVENAEK----GGKIAVHCKAGLGRTGTLIACYLMYEY-----GMTAGEAIAWLRICR 188 (225)
T ss_pred eeeeecCCCCCCCHHHHHHHHHHHHHHHh----cCeEEEEeccCCCchhHHHHHHHHHHh-----CCCHHHHHHHHHhcC
Confidence 33445 56777778889999999987765 468999999999999999999999885 466778899999999
Q ss_pred CCCCCChhhhccccHHHHHHH-HhhcCCCCCCCCCCC
Q psy8773 1636 PAMVQTEHLYTSSPFSEQLAL-DMREVPPGPPLKRPD 1671 (1773)
Q Consensus 1636 PgmVqT~eQY~~~~f~Y~~~~-ey~~~~~~~~~~~~~ 1671 (1773)
||||++.+|+. .+++... -+.....++.+...+
T Consensus 189 pG~V~gpqQ~~---l~~~q~~~~~~~~~~~~~~k~~~ 222 (225)
T KOG1720|consen 189 PGAVIGPQQHK---LLHKQRDLWLAGDLFRRKLKQRP 222 (225)
T ss_pred CccccCHHHHH---HHHHHHHHHhhhcccchhhccCc
Confidence 99999999999 6666544 233334455444433
No 42
>PTZ00393 protein tyrosine phosphatase; Provisional
Probab=98.97 E-value=2.5e-09 Score=121.31 Aligned_cols=135 Identities=18% Similarity=0.237 Sum_probs=97.4
Q ss_pred cccEEEeCCCCcCCHHHHHHHHHHcCCcEEEEcccccccCcccccccCCCCCCceeeeEEEEEEEEEEecceEEEEEEEe
Q psy8773 283 HNAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRGTETYGHITVTLQDVQELASYCIRTFMIN 362 (1773)
Q Consensus 283 ~~kyIaTQgPl~~Tv~DFWrMVWEq~v~iIVMLT~l~E~gr~KC~qYWP~~~~~~yG~~~Vt~~~~~~~~~y~iRtf~I~ 362 (1773)
.-+||++-+|+..++.+|..-..+.++..||-+|.. .| +.+. +
T Consensus 91 ~~rfLi~~~P~~~~~~~yl~eLk~~gV~~lVrlcE~---------~Y-d~~~---~------------------------ 133 (241)
T PTZ00393 91 KIKILILDAPTNDLLPLYIKEMKNYNVTDLVRTCER---------TY-NDGE---I------------------------ 133 (241)
T ss_pred ceeEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCCC---------CC-CHHH---H------------------------
Confidence 348999999999999999999999999999998641 12 1110 0
Q ss_pred eCCCCceEEEEEEEecCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCceeehhHHHHH
Q psy8773 363 KGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMI 442 (1773)
Q Consensus 363 ~~~~~esR~V~hfhYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTGtFIaID~ll 442 (1773)
+..-+.++ ...|||+++|.. ..+-+|+..+...... .++|+|||.||+||||+++|+.. +
T Consensus 134 -----~~~GI~~~-~lpipDg~aPs~-~~i~~~l~~i~~~l~~------------g~~VaVHC~AGlGRTGtl~AayL-I 193 (241)
T PTZ00393 134 -----TSAGINVH-ELIFPDGDAPTV-DIVSNWLTIVNNVIKN------------NRAVAVHCVAGLGRAPVLASIVL-I 193 (241)
T ss_pred -----HHcCCeEE-EeecCCCCCCCH-HHHHHHHHHHHHHHhc------------CCeEEEECCCCCCHHHHHHHHHH-H
Confidence 00113333 357899999953 3344444444433211 46899999999999999987643 2
Q ss_pred HHHhcCCccCHHHHHHHHHHhcccCCCCHHHHHHHHHH
Q psy8773 443 ERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDA 480 (1773)
Q Consensus 443 ~~l~~e~~VdV~~iV~~LR~qR~~mVQT~eQY~FIy~a 480 (1773)
+ .-++..+.+..+|+.|++++ +..|+.|+.+.
T Consensus 194 ---~--~GmspeeAI~~VR~~RPgAI-n~~Q~~fL~~y 225 (241)
T PTZ00393 194 ---E--FGMDPIDAIVFIRDRRKGAI-NKRQLQFLKAY 225 (241)
T ss_pred ---H--cCCCHHHHHHHHHHHCCCCC-CHHHHHHHHHH
Confidence 2 24699999999999999998 57899998764
No 43
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=98.76 E-value=2.1e-08 Score=104.81 Aligned_cols=87 Identities=23% Similarity=0.443 Sum_probs=65.3
Q ss_pred ceEEeeEEecCCCCCCCCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHH
Q psy8773 1549 SRTLRQFQLIDWPEQGVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTV 1628 (1773)
Q Consensus 1549 ~r~V~qfQ~~~WPd~gvP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtV 1628 (1773)
..+..||.+.+|++...+..-..++++| +...++ ++||+|||.+|.||||+||+++++..+ .++.-+++
T Consensus 47 ~~~~~~~~~~D~~~~~~~~~~~~~~~~i---~~~~~~---~~~vlVHC~~G~~Rs~~~~~~~l~~~~-----~~~~~~a~ 115 (139)
T cd00127 47 DFNYLYVPILDLPSQDISKYFDEAVDFI---DDAREK---GGKVLVHCLAGVSRSATLVIAYLMKTL-----GLSLREAY 115 (139)
T ss_pred CceEEEEEceeCCCCChHHHHHHHHHHH---HHHHhc---CCcEEEECCCCCchhHHHHHHHHHHHc-----CCCHHHHH
Confidence 3467778888888544433333344444 333332 579999999999999999999988776 57999999
Q ss_pred HHHHhcCCCCCCChhhhc
Q psy8773 1629 RILRTQRPAMVQTEHLYT 1646 (1773)
Q Consensus 1629 K~lR~~RPgmVqT~eQY~ 1646 (1773)
+.+|.+||.+..+..+.+
T Consensus 116 ~~vr~~r~~~~~~~~~~~ 133 (139)
T cd00127 116 EFVKSRRPIISPNAGFMR 133 (139)
T ss_pred HHHHHHCCccCCCHHHHH
Confidence 999999999888877776
No 44
>KOG1720|consensus
Probab=98.71 E-value=3.4e-08 Score=108.90 Aligned_cols=84 Identities=29% Similarity=0.359 Sum_probs=72.1
Q ss_pred CCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCceeehhHHHHHHHHhcCCccCHHHHHHH
Q psy8773 380 WPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTC 459 (1773)
Q Consensus 380 WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTGtFIaID~ll~~l~~e~~VdV~~iV~~ 459 (1773)
.||.++| ++..+.+|++.|..... .|-|.|||-||.|||||+||.-+|.. ..+.--++|..
T Consensus 123 f~Dg~tP-~~~~v~~fv~i~e~~~~-------------~g~iaVHCkaGlGRTG~liAc~lmy~-----~g~ta~eaI~~ 183 (225)
T KOG1720|consen 123 FADGSTP-TDAIVKEFVKIVENAEK-------------GGKIAVHCKAGLGRTGTLIACYLMYE-----YGMTAGEAIAW 183 (225)
T ss_pred cCCCCCC-CHHHHHHHHHHHHHHHh-------------cCeEEEEeccCCCchhHHHHHHHHHH-----hCCCHHHHHHH
Confidence 4898888 68899999999987654 36899999999999999999776554 45788899999
Q ss_pred HHHhcccCCCCHHHHHHHHHHHH
Q psy8773 460 LRAQRNYMVQTEDQYMFIHDALL 482 (1773)
Q Consensus 460 LR~qR~~mVQT~eQY~FIy~aLl 482 (1773)
||..|++||++.+|+..+|+--.
T Consensus 184 lR~~RpG~V~gpqQ~~l~~~q~~ 206 (225)
T KOG1720|consen 184 LRICRPGAVIGPQQHKLLHKQRD 206 (225)
T ss_pred HHhcCCccccCHHHHHHHHHHHH
Confidence 99999999999999999887654
No 45
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=98.56 E-value=2.1e-07 Score=103.06 Aligned_cols=91 Identities=24% Similarity=0.440 Sum_probs=68.8
Q ss_pred EEecCCC--CCCCCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHHHHHH
Q psy8773 1555 FQLIDWP--EQGVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRILR 1632 (1773)
Q Consensus 1555 fQ~~~WP--d~gvP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtVK~lR 1632 (1773)
.|+..+| |+.+| +...+-.++..++...++ ++.|+|||..|+|||||++|+++++.+ +.-.+-.++..+|
T Consensus 73 ~~~~~~~~~D~~~p-~~~~l~~~v~~i~~~~~~---g~kVvVHC~~GigRSgtviaA~lm~~~----~~~~~~~~i~~~~ 144 (180)
T COG2453 73 IQVLHLPILDGTVP-DLEDLDKIVDFIEEALSK---GKKVVVHCQGGIGRSGTVIAAYLMLYG----GLSLADEAIAVKR 144 (180)
T ss_pred ceeeeeeecCCCCC-cHHHHHHHHHHHHHHHhc---CCeEEEEcCCCCchHHHHHHHHHHHHc----CCCCHHHHHHHHH
Confidence 3444555 45455 445566666666655554 458999999999999999999998874 4556667788899
Q ss_pred hcCCCCCCChhhhccccHHHHHHH
Q psy8773 1633 TQRPAMVQTEHLYTSSPFSEQLAL 1656 (1773)
Q Consensus 1633 ~~RPgmVqT~eQY~~~~f~Y~~~~ 1656 (1773)
..||+++.+.+|+. |..+...
T Consensus 145 ~~r~~~v~~~~q~~---~~~e~~~ 165 (180)
T COG2453 145 RRRPGAVVTEIQHL---FELEQEL 165 (180)
T ss_pred hcCCcccccHHHHH---HHHHHHH
Confidence 99999999999999 7777665
No 46
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=98.56 E-value=1.6e-07 Score=98.31 Aligned_cols=89 Identities=15% Similarity=0.243 Sum_probs=67.0
Q ss_pred eEEEEEEeCCCCCCCCCCCChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHHHHHhhCC
Q psy8773 881 REIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDK 960 (1773)
Q Consensus 881 R~V~hfhyt~WPD~gVP~s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~ 960 (1773)
....|+.+.+|++...+.....+++|+...... .+||+|||.+|.||||++++...+..+
T Consensus 48 ~~~~~~~~~D~~~~~~~~~~~~~~~~i~~~~~~---------------~~~vlVHC~~G~~Rs~~~~~~~l~~~~----- 107 (139)
T cd00127 48 FNYLYVPILDLPSQDISKYFDEAVDFIDDAREK---------------GGKVLVHCLAGVSRSATLVIAYLMKTL----- 107 (139)
T ss_pred ceEEEEEceeCCCCChHHHHHHHHHHHHHHHhc---------------CCcEEEECCCCCchhHHHHHHHHHHHc-----
Confidence 456778888888555444444555666554431 469999999999999999987765544
Q ss_pred CcchHHHHHHHHhccccccCChhhhhhHH
Q psy8773 961 TVDIYGHVTCLRAQRNYMVQTEDQYMFIH 989 (1773)
Q Consensus 961 ~VDVf~~Vk~LR~QR~~mVQT~eQY~FiY 989 (1773)
..+..++++.+|++|+.+..+..+...+.
T Consensus 108 ~~~~~~a~~~vr~~r~~~~~~~~~~~~l~ 136 (139)
T cd00127 108 GLSLREAYEFVKSRRPIISPNAGFMRQLK 136 (139)
T ss_pred CCCHHHHHHHHHHHCCccCCCHHHHHHHH
Confidence 57999999999999999988887776653
No 47
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=98.48 E-value=5.9e-07 Score=94.41 Aligned_cols=53 Identities=25% Similarity=0.466 Sum_probs=47.9
Q ss_pred CCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHHHHHHhcCCCCCCChhhhc
Q psy8773 1589 DGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRILRTQRPAMVQTEHLYT 1646 (1773)
Q Consensus 1589 ~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtVK~lR~~RPgmVqT~eQY~ 1646 (1773)
++||+|||.+|.||||+++|++++..+ ..++-++++.+|..||++..+..|.+
T Consensus 78 ~~~VlVHC~~G~~RS~~v~~~yl~~~~-----~~~~~~A~~~v~~~R~~~~p~~~~~~ 130 (138)
T smart00195 78 GGKVLVHCQAGVSRSATLIIAYLMKYR-----NLSLNDAYDFVKDRRPIISPNFGFLR 130 (138)
T ss_pred CCeEEEECCCCCchHHHHHHHHHHHHh-----CCCHHHHHHHHHHHCCccCCCHhHHH
Confidence 679999999999999999999987764 47999999999999999999988777
No 48
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=98.28 E-value=1.8e-06 Score=90.08 Aligned_cols=74 Identities=16% Similarity=0.352 Sum_probs=58.3
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHHHHHHhcCCCCCCChhhhcccc
Q psy8773 1570 DGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRILRTQRPAMVQTEHLYTSSP 1649 (1773)
Q Consensus 1570 ~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtVK~lR~~RPgmVqT~eQY~~~~ 1649 (1773)
..+-.+++.+++...+ +++|+|||.+|.||||+++|++++... .+++-++++.+|..||++..+..+++
T Consensus 57 ~~~~~~~~~i~~~~~~---~~~VlVHC~~G~~RS~~v~~ayLm~~~-----~~~~~~A~~~v~~~rp~~~~~~~~~~--- 125 (133)
T PF00782_consen 57 EHLDQAVEFIENAISE---GGKVLVHCKAGLSRSGAVAAAYLMKKN-----GMSLEEAIEYVRSRRPQINPNPSFIR--- 125 (133)
T ss_dssp GGHHHHHHHHHHHHHT---TSEEEEEESSSSSHHHHHHHHHHHHHH-----TSSHHHHHHHHHHHSTTSTHHHHHHH---
T ss_pred HHHHHHHHhhhhhhcc---cceeEEEeCCCcccchHHHHHHHHHHc-----CCCHHHHHHHHHHHCCCCCCCHHHHH---
Confidence 3444555555555443 679999999999999999999997754 46888999999999999999988888
Q ss_pred HHHHH
Q psy8773 1650 FSEQL 1654 (1773)
Q Consensus 1650 f~Y~~ 1654 (1773)
.+++.
T Consensus 126 ~L~~~ 130 (133)
T PF00782_consen 126 QLYEY 130 (133)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 55543
No 49
>COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]
Probab=98.20 E-value=4.5e-06 Score=92.59 Aligned_cols=90 Identities=22% Similarity=0.221 Sum_probs=67.7
Q ss_pred CCCCCCCCCCCChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHHHHHhhCCCcchHHHH
Q psy8773 889 TAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHV 968 (1773)
Q Consensus 889 t~WPD~gVP~s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~VDVf~~V 968 (1773)
..|+|+.+|+. ..+-.++..+...... .+.|+|||.+|+|||||++|+..|+. .+.....+++
T Consensus 78 ~~~~D~~~p~~-~~l~~~v~~i~~~~~~------------g~kVvVHC~~GigRSgtviaA~lm~~----~~~~~~~~~i 140 (180)
T COG2453 78 LPILDGTVPDL-EDLDKIVDFIEEALSK------------GKKVVVHCQGGIGRSGTVIAAYLMLY----GGLSLADEAI 140 (180)
T ss_pred eeecCCCCCcH-HHHHHHHHHHHHHHhc------------CCeEEEEcCCCCchHHHHHHHHHHHH----cCCCCHHHHH
Confidence 35789998855 4444444444443221 34899999999999999999887765 3455677888
Q ss_pred HHHHhccccccCChhhhhhHHHHHHHH
Q psy8773 969 TCLRAQRNYMVQTEDQYMFIHDALLEA 995 (1773)
Q Consensus 969 k~LR~QR~~mVQT~eQY~FiY~aLlEy 995 (1773)
..+|..|++++.+..|+.|..+...-.
T Consensus 141 ~~~~~~r~~~v~~~~q~~~~~e~~~~~ 167 (180)
T COG2453 141 AVKRRRRPGAVVTEIQHLFELEQELFR 167 (180)
T ss_pred HHHHhcCCcccccHHHHHHHHHHHHHH
Confidence 889999999999999999988776544
No 50
>KOG2836|consensus
Probab=98.16 E-value=6.3e-06 Score=85.16 Aligned_cols=132 Identities=21% Similarity=0.386 Sum_probs=92.8
Q ss_pred CceEEecCCCCCChhhhhhheeecCCcEEEEccCcccccccccccccCCCCceeeecEEEEEEEEEeecCEEEEEEEEEe
Q psy8773 795 NAYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTRIKCDQYWPSRGTETYGHITVTLQDVQELASYCIRTFMINK 874 (1773)
Q Consensus 795 ~~yIaTQgPL~~Tv~DFWrMVwE~~v~vIVMLt~l~E~gk~KC~qYWP~~~~~~yG~~tVtl~~~~~~~~yiiRtl~V~~ 874 (1773)
-+|.+|--|...|+..|-.-.-.+++.++|-.|... |..-.+
T Consensus 17 MrFLIThnPtnaTln~fieELkKygvttvVRVCe~T------------------Ydt~~l-------------------- 58 (173)
T KOG2836|consen 17 MRFLITHNPTNATLNKFIEELKKYGVTTVVRVCEPT------------------YDTTPL-------------------- 58 (173)
T ss_pred eEEEEecCCCchhHHHHHHHHHhcCCeEEEEecccc------------------cCCchh--------------------
Confidence 579999999999999999999999999999987632 110000
Q ss_pred CCCCceeEEEEEEeCCCC-CCCCCCCChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHH
Q psy8773 875 GADSERREIKQLQFTAWP-DHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMI 953 (1773)
Q Consensus 875 ~~~~~~R~V~hfhyt~WP-D~gVP~s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lL 953 (1773)
+-.-++..+|| |.|.|...+-+-+.+..+....... +..-|-|||-||.||+-+++|+..+-
T Consensus 59 -------ek~GI~Vldw~f~dg~ppp~qvv~~w~~l~~~~f~e~----------p~~cvavhcvaglgrapvlvalalie 121 (173)
T KOG2836|consen 59 -------EKEGITVLDWPFDDGAPPPNQVVDDWLSLVKTKFREE----------PGCCVAVHCVAGLGRAPVLVALALIE 121 (173)
T ss_pred -------hhcCceEeecccccCCCCchHHHHHHHHHHHHHHhhC----------CCCeEEEEeecccCcchHHHHHHHHH
Confidence 00113445798 7888876654444445444433221 34579999999999999999986554
Q ss_pred HHHhhCCCcchHHHHHHHHhccccccCChhhhhhH
Q psy8773 954 ERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFI 988 (1773)
Q Consensus 954 eql~~e~~VDVf~~Vk~LR~QR~~mVQT~eQY~Fi 988 (1773)
.-| ...+.|..+|++|.|++.+ .|..|+
T Consensus 122 ~gm------kyedave~ir~krrga~n~-kql~~l 149 (173)
T KOG2836|consen 122 AGM------KYEDAVEMIRQKRRGAINS-KQLLYL 149 (173)
T ss_pred ccc------cHHHHHHHHHHHhhccccH-HHHHHH
Confidence 333 4557889999999999854 466554
No 51
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=98.00 E-value=2.4e-05 Score=82.34 Aligned_cols=56 Identities=20% Similarity=0.335 Sum_probs=47.3
Q ss_pred CCCEEEEcCCCCccchhHhHHHHHHHHHhhCCCcchHHHHHHHHhccccccCChhhhhhHH
Q psy8773 929 VGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIH 989 (1773)
Q Consensus 929 ~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~VDVf~~Vk~LR~QR~~mVQT~eQY~FiY 989 (1773)
.+||+|||.+|.||||+++++..+.. ...++.++++.+|+.|+.+..+..|+.-+.
T Consensus 78 ~~~VlVHC~~G~~RS~~v~~~yl~~~-----~~~~~~~A~~~v~~~R~~~~p~~~~~~qL~ 133 (138)
T smart00195 78 GGKVLVHCQAGVSRSATLIIAYLMKY-----RNLSLNDAYDFVKDRRPIISPNFGFLRQLI 133 (138)
T ss_pred CCeEEEECCCCCchHHHHHHHHHHHH-----hCCCHHHHHHHHHHHCCccCCCHhHHHHHH
Confidence 47999999999999999999775443 246899999999999999999988776553
No 52
>PRK12361 hypothetical protein; Provisional
Probab=97.84 E-value=4.4e-05 Score=98.23 Aligned_cols=77 Identities=14% Similarity=0.306 Sum_probs=62.3
Q ss_pred CCCCCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHHHHHHhcCCCCCCC
Q psy8773 1562 EQGVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRILRTQRPAMVQT 1641 (1773)
Q Consensus 1562 d~gvP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtVK~lR~~RPgmVqT 1641 (1773)
|...| +.+.+-+.++.+++..++ +++|+|||..|.|||+++++++++..+ ...++-++++.+|..||.+..+
T Consensus 152 D~~~p-~~~~l~~a~~~i~~~~~~---~~~VlVHC~~G~sRSa~vv~ayLm~~~----~~~~~~eA~~~vr~~Rp~v~~n 223 (547)
T PRK12361 152 DHSVP-TLAQLNQAINWIHRQVRA---NKSVVVHCALGRGRSVLVLAAYLLCKD----PDLTVEEVLQQIKQIRKTARLN 223 (547)
T ss_pred CCCCC-cHHHHHHHHHHHHHHHHC---CCeEEEECCCCCCcHHHHHHHHHHHhc----cCCCHHHHHHHHHHHCCCCCCC
Confidence 44444 556666667777766554 579999999999999999999987553 2468889999999999999999
Q ss_pred hhhhc
Q psy8773 1642 EHLYT 1646 (1773)
Q Consensus 1642 ~eQY~ 1646 (1773)
.+|.+
T Consensus 224 ~~q~~ 228 (547)
T PRK12361 224 KRQLR 228 (547)
T ss_pred HHHHH
Confidence 99999
No 53
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=97.79 E-value=4.6e-05 Score=79.53 Aligned_cols=57 Identities=19% Similarity=0.356 Sum_probs=48.0
Q ss_pred CCCEEEEcCCCCccchhHhHHHHHHHHHhhCCCcchHHHHHHHHhccccccCChhhhhhHHH
Q psy8773 929 VGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHD 990 (1773)
Q Consensus 929 ~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~VDVf~~Vk~LR~QR~~mVQT~eQY~FiY~ 990 (1773)
.++|+|||.+|+||||+++++..+... ..++.++++.+|+.|+.+..+..|+..++.
T Consensus 73 ~~~VlVHC~~G~~RS~~v~~ayLm~~~-----~~~~~~A~~~v~~~rp~~~~~~~~~~~L~~ 129 (133)
T PF00782_consen 73 GGKVLVHCKAGLSRSGAVAAAYLMKKN-----GMSLEEAIEYVRSRRPQINPNPSFIRQLYE 129 (133)
T ss_dssp TSEEEEEESSSSSHHHHHHHHHHHHHH-----TSSHHHHHHHHHHHSTTSTHHHHHHHHHHH
T ss_pred cceeEEEeCCCcccchHHHHHHHHHHc-----CCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
Confidence 479999999999999999997665432 458899999999999999988888776654
No 54
>PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species. The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.
Probab=97.09 E-value=0.00082 Score=73.41 Aligned_cols=52 Identities=21% Similarity=0.434 Sum_probs=33.5
Q ss_pred cCCCCCCCCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHH
Q psy8773 1558 IDWPEQGVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVL 1613 (1773)
Q Consensus 1558 ~~WPd~gvP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~ll 1613 (1773)
.-+||.++|. ...+.+++.++...-+. ++.|+|||..|.||||++.|+.++.
T Consensus 106 ~PI~D~~aPd-~~~~~~i~~eL~~~L~~---g~~V~vHC~GGlGRtGlvAAcLLl~ 157 (168)
T PF05706_consen 106 LPIPDGSAPD-FAAAWQILEELAARLEN---GRKVLVHCRGGLGRTGLVAACLLLE 157 (168)
T ss_dssp ----TTS----HHHHHHHHHHHHHHHHT---T--EEEE-SSSSSHHHHHHHHHHHH
T ss_pred cCccCCCCCC-HHHHHHHHHHHHHHHHc---CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 3566888884 55667777777766554 5689999999999999999987753
No 55
>PRK12361 hypothetical protein; Provisional
Probab=96.96 E-value=0.0019 Score=83.54 Aligned_cols=89 Identities=17% Similarity=0.250 Sum_probs=62.8
Q ss_pred EEEEeCCCCCCCCCCCChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHHHHHhhCCCcc
Q psy8773 884 KQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVD 963 (1773)
Q Consensus 884 ~hfhyt~WPD~gVP~s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~VD 963 (1773)
.++++.-| |+..| +...+-+.++.+.+.... .++++|||.+|.|||+++++...+. .....+
T Consensus 144 ~yl~iPi~-D~~~p-~~~~l~~a~~~i~~~~~~------------~~~VlVHC~~G~sRSa~vv~ayLm~----~~~~~~ 205 (547)
T PRK12361 144 DYLNIPIL-DHSVP-TLAQLNQAINWIHRQVRA------------NKSVVVHCALGRGRSVLVLAAYLLC----KDPDLT 205 (547)
T ss_pred eEEEeecC-CCCCC-cHHHHHHHHHHHHHHHHC------------CCeEEEECCCCCCcHHHHHHHHHHH----hccCCC
Confidence 33444333 66666 344455555555443221 4799999999999999999886443 334578
Q ss_pred hHHHHHHHHhccccccCChhhhhhHHH
Q psy8773 964 IYGHVTCLRAQRNYMVQTEDQYMFIHD 990 (1773)
Q Consensus 964 Vf~~Vk~LR~QR~~mVQT~eQY~FiY~ 990 (1773)
+.++++.+|+.|+.+..+..|...+-.
T Consensus 206 ~~eA~~~vr~~Rp~v~~n~~q~~~l~~ 232 (547)
T PRK12361 206 VEEVLQQIKQIRKTARLNKRQLRALEK 232 (547)
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHH
Confidence 999999999999999999988876543
No 56
>KOG1719|consensus
Probab=96.50 E-value=0.0067 Score=65.04 Aligned_cols=81 Identities=17% Similarity=0.308 Sum_probs=62.9
Q ss_pred CCCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHHHHHHhcCCCCCCChh
Q psy8773 1564 GVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRILRTQRPAMVQTEH 1643 (1773)
Q Consensus 1564 gvP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtVK~lR~~RPgmVqT~e 1643 (1773)
+.|+ .+.+-.-++-+++.+.. +..+-|||-+|-|||.|.++||++..+ ..-.-+++..+|..||...--..
T Consensus 88 ~~Ps-~~~i~~aVeFi~k~asL---GktvYVHCKAGRtRSaTvV~cYLmq~~-----~wtpe~A~~~vr~iRp~VlL~~~ 158 (183)
T KOG1719|consen 88 GAPS-LENIQKAVEFIHKNASL---GKTVYVHCKAGRTRSATVVACYLMQHK-----NWTPEAAVEHVRKIRPRVLLRPA 158 (183)
T ss_pred CCCC-HHHHHHHHHHHHhcccc---CCeEEEEecCCCccchhhhhhhhhhhc-----CCCHHHHHHHHHhcCcceeecHH
Confidence 4443 33444444455554443 568999999999999999999998775 56777899999999999999999
Q ss_pred hhccccHHHHHHHHhhc
Q psy8773 1644 LYTSSPFSEQLALDMRE 1660 (1773)
Q Consensus 1644 QY~~~~f~Y~~~~ey~~ 1660 (1773)
|.+ ++.||..
T Consensus 159 Qw~-------~l~ef~~ 168 (183)
T KOG1719|consen 159 QWD-------VLKEFYK 168 (183)
T ss_pred HHH-------HHHHHHH
Confidence 999 8887765
No 57
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=95.74 E-value=0.02 Score=63.13 Aligned_cols=72 Identities=19% Similarity=0.303 Sum_probs=39.8
Q ss_pred EEeeEEecCCCCCCCCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHHHH
Q psy8773 1551 TLRQFQLIDWPEQGVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRI 1630 (1773)
Q Consensus 1551 ~V~qfQ~~~WPd~gvP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtVK~ 1630 (1773)
...++....|.+..++.+.+.+.+.++.+.... +.||+|||..|..|||+.+||+-.++. -+.=+++..
T Consensus 58 ~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~~-----n~PvLiHC~~G~~rTG~vvg~lRk~Q~------W~~~~i~~E 126 (164)
T PF03162_consen 58 KLIHIPMSSSKDPWVPISEEQVAEALEIILDPR-----NYPVLIHCNHGKDRTGLVVGCLRKLQG------WSLSSIFDE 126 (164)
T ss_dssp EEEE-------GGG----HHHHHHHHHHHH-GG-----G-SEEEE-SSSSSHHHHHHHHHHHHTT------B-HHHHHHH
T ss_pred eEEEeccccccCccccCCHHHHHHHHHHHhCCC-----CCCEEEEeCCCCcchhhHHHHHHHHcC------CCHHHHHHH
Confidence 334444445544456677777777776654332 469999999999999999999875543 455555666
Q ss_pred HHh
Q psy8773 1631 LRT 1633 (1773)
Q Consensus 1631 lR~ 1633 (1773)
+|+
T Consensus 127 y~~ 129 (164)
T PF03162_consen 127 YRR 129 (164)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 58
>PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species. The cyclin-dependent kinase (Cdk)-associated protein phosphatase (KAP) is a human dual specificity protein phosphatase that dephosphorylates Cdk2 on threonine 160 in a cyclin-dependent manner [], []. This domain is also found in MAP kinase phosphatase and esterases. This entry contains both eukaryotic and bacterial proteins.; GO: 0004721 phosphoprotein phosphatase activity, 0004725 protein tyrosine phosphatase activity; PDB: 1FQ1_A 1FPZ_F.
Probab=95.72 E-value=0.01 Score=65.16 Aligned_cols=122 Identities=21% Similarity=0.242 Sum_probs=55.8
Q ss_pred CCceeeEeccCcC--CCCceEEecCCCCCChhhhhh-------heeecCCcEEEEccCcccccccccccccCCCCceeee
Q psy8773 780 SDYINANYCDGYR--KHNAYVATQGPLQETLGDFWR-------MVWELRSVTIVMMTKLEERTRIKCDQYWPSRGTETYG 850 (1773)
Q Consensus 780 sDYINASyIdGy~--~~~~yIaTQgPL~~Tv~DFWr-------MVwE~~v~vIVMLt~l~E~gk~KC~qYWP~~~~~~yG 850 (1773)
++-|+.+|++--. .....-.|=+|=.. ..|.|| -+.++.+..||.|+...|..+-+ +|+-+. .
T Consensus 24 ~~P~~i~~l~~s~~~~~~~Lglt~~PG~k-~~d~~RdL~~DL~~Lk~~G~~~Vvtl~~~~EL~~l~----Vp~L~~-~-- 95 (168)
T PF05706_consen 24 QTPIQIDWLPLSPVNCSGFLGLTFLPGCK-FKDWRRDLQADLERLKDWGAQDVVTLLTDHELARLG----VPDLGE-A-- 95 (168)
T ss_dssp TS----EEEE-GGGT-SSEEEEES-TT-E-ETTEEB-HHHHHHHHHHTT--EEEE-S-HHHHHHTT-----TTHHH-H--
T ss_pred CCceeeeeecccccCCcceeeeecCCCcc-cccccchHHHHHHHHHHCCCCEEEEeCcHHHHHHcC----CccHHH-H--
Confidence 3466666665321 12233444444321 233332 35578899999999888876433 232110 0
Q ss_pred cEEEEEEEEEeecCEEEEEEEEEeCCCCceeEEEEEEeCCCCCCCCCCCChhHHHHHHHHHhhCCCCCCCcCCCCCCCCC
Q psy8773 851 HITVTLQDVQELASYCIRTFMINKGADSERREIKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVG 930 (1773)
Q Consensus 851 ~~tVtl~~~~~~~~yiiRtl~V~~~~~~~~R~V~hfhyt~WPD~gVP~s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~g 930 (1773)
.+.+-+..+|| -+||.++|+ ...+..++..+...-.. ..
T Consensus 96 ---------------------------~~~~Gi~~~h~-PI~D~~aPd-~~~~~~i~~eL~~~L~~------------g~ 134 (168)
T PF05706_consen 96 ---------------------------AQARGIAWHHL-PIPDGSAPD-FAAAWQILEELAARLEN------------GR 134 (168)
T ss_dssp ---------------------------HHHTT-EEEE-----TTS----HHHHHHHHHHHHHHHHT------------T-
T ss_pred ---------------------------HHHcCCEEEec-CccCCCCCC-HHHHHHHHHHHHHHHHc------------CC
Confidence 01122333344 478999994 45566777666554221 35
Q ss_pred CEEEEcCCCCccchhHhHHH
Q psy8773 931 PLIVHCSAGVGRTGCFIVID 950 (1773)
Q Consensus 931 PIVVHCSaGVGRTGtFIAId 950 (1773)
.++|||..|.||||+++|..
T Consensus 135 ~V~vHC~GGlGRtGlvAAcL 154 (168)
T PF05706_consen 135 KVLVHCRGGLGRTGLVAACL 154 (168)
T ss_dssp -EEEE-SSSSSHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 89999999999999998754
No 59
>KOG1718|consensus
Probab=95.65 E-value=0.041 Score=60.03 Aligned_cols=79 Identities=22% Similarity=0.407 Sum_probs=52.5
Q ss_pred eEEeeEEecCCCCCCCCCChh-hHHHHHHH-HHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHH
Q psy8773 1550 RTLRQFQLIDWPEQGVPKSGD-GFIDFIGQ-VHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQT 1627 (1773)
Q Consensus 1550 r~V~qfQ~~~WPd~gvP~s~~-~lidlI~~-V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQt 1627 (1773)
+...++||..-|-.+.|.+.- ..+|.+.. ++.... ++|.++|||.+|+.||+.+|-++++--. .+..-++
T Consensus 56 ~~l~~~qy~kv~~~D~p~~~l~~hfD~vAD~I~~v~~---~gG~TLvHC~AGVSRSAsLClAYLmK~~-----~msLreA 127 (198)
T KOG1718|consen 56 TSLPDIQYMKVPLEDTPQARLYDHFDPVADKIHSVIM---RGGKTLVHCVAGVSRSASLCLAYLMKYH-----CMSLREA 127 (198)
T ss_pred ccCCCceeEEEEcccCCcchhhhhhhHHHHHHHHHHh---cCCcEEEEEccccchhHHHHHHHHHHHc-----cchHHHH
Confidence 566778888888777776643 23444332 333332 2689999999999999999999986543 3455555
Q ss_pred HHHHHhcCC
Q psy8773 1628 VRILRTQRP 1636 (1773)
Q Consensus 1628 VK~lR~~RP 1636 (1773)
-..+...||
T Consensus 128 y~~vKa~Rp 136 (198)
T KOG1718|consen 128 YHWVKARRP 136 (198)
T ss_pred HHHHHhhCc
Confidence 555555555
No 60
>PF14566 PTPlike_phytase: Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B ....
Probab=95.06 E-value=0.017 Score=62.70 Aligned_cols=50 Identities=36% Similarity=0.610 Sum_probs=34.7
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCceeehhHHHHH
Q psy8773 379 AWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMI 442 (1773)
Q Consensus 379 ~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTGtFIaID~ll 442 (1773)
..+|+..| .+..+=.|+..++.. +. ...+++||.+|.|||.+|.++-.|+
T Consensus 99 pitd~~~P-~~~~iD~fi~~v~~~-p~------------~~~l~fhC~~G~GRTTt~Mv~~~li 148 (149)
T PF14566_consen 99 PITDHQAP-DPEDIDAFINFVKSL-PK------------DTWLHFHCQAGRGRTTTFMVMYDLI 148 (149)
T ss_dssp EE-TTS----HHHHHHHHHHHHTS--T------------T-EEEEE-SSSSHHHHHHHHHHHHH
T ss_pred eCCCcCCC-CHHHHHHHHHHHHhC-CC------------CCeEEEECCCCCCHHHHHHHHHHHh
Confidence 44688878 577788888888876 22 3589999999999999999876655
No 61
>PF14566 PTPlike_phytase: Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B ....
Probab=95.03 E-value=0.016 Score=62.89 Aligned_cols=56 Identities=23% Similarity=0.393 Sum_probs=36.3
Q ss_pred eEEecCCC-CCCCCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHH
Q psy8773 1554 QFQLIDWP-EQGVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVL 1613 (1773)
Q Consensus 1554 qfQ~~~WP-d~gvP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~ll 1613 (1773)
++.|..-| .+...++.+.|-.||+.+... . .+..+++||.+|.|||.+|.+++.++
T Consensus 92 g~~Y~Ripitd~~~P~~~~iD~fi~~v~~~-p---~~~~l~fhC~~G~GRTTt~Mv~~~li 148 (149)
T PF14566_consen 92 GLRYYRIPITDHQAPDPEDIDAFINFVKSL-P---KDTWLHFHCQAGRGRTTTFMVMYDLI 148 (149)
T ss_dssp T-EEEEEEE-TTS---HHHHHHHHHHHHTS-----TT-EEEEE-SSSSHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCcCCCCHHHHHHHHHHHHhC-C---CCCeEEEECCCCCCHHHHHHHHHHHh
Confidence 34444444 222344567788888887765 2 26689999999999999999998876
No 62
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=94.97 E-value=0.021 Score=62.93 Aligned_cols=71 Identities=17% Similarity=0.211 Sum_probs=37.4
Q ss_pred EEEEEeCCCCCCCCCCCChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHHHHHHhhCCCc
Q psy8773 883 IKQLQFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTV 962 (1773)
Q Consensus 883 V~hfhyt~WPD~gVP~s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~V 962 (1773)
+.|+....|.+..++.+.+.+.+.++.+.... +.||+|||..|..|||+.+|+.--++ .-
T Consensus 59 l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~~--------------n~PvLiHC~~G~~rTG~vvg~lRk~Q------~W 118 (164)
T PF03162_consen 59 LIHIPMSSSKDPWVPISEEQVAEALEIILDPR--------------NYPVLIHCNHGKDRTGLVVGCLRKLQ------GW 118 (164)
T ss_dssp EEE-------GGG----HHHHHHHHHHHH-GG--------------G-SEEEE-SSSSSHHHHHHHHHHHHT------TB
T ss_pred EEEeccccccCccccCCHHHHHHHHHHHhCCC--------------CCCEEEEeCCCCcchhhHHHHHHHHc------CC
Confidence 34444445544455556666777776654431 47999999999999999999654322 34
Q ss_pred chHHHHHHHHh
Q psy8773 963 DIYGHVTCLRA 973 (1773)
Q Consensus 963 DVf~~Vk~LR~ 973 (1773)
++.+++.++|.
T Consensus 119 ~~~~i~~Ey~~ 129 (164)
T PF03162_consen 119 SLSSIFDEYRR 129 (164)
T ss_dssp -HHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 45555666654
No 63
>KOG2283|consensus
Probab=94.60 E-value=0.029 Score=70.31 Aligned_cols=91 Identities=20% Similarity=0.306 Sum_probs=66.0
Q ss_pred cCCCCCCCCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHhhc--ccCCcCHHHHHHHHHhcC
Q psy8773 1558 IDWPEQGVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQ--YEGVIDLFQTVRILRTQR 1635 (1773)
Q Consensus 1558 ~~WPd~gvP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk--~E~~VDVFQtVK~lR~~R 1635 (1773)
.+|||+.+|. .+.+..+-+.+..|-.+.. ..=++|||-+|-||||+.++++++...+- ++.++|.|-..+ ...
T Consensus 78 ~~~~Dh~~P~-L~~l~~~c~~~~~WL~~d~-~nVvvvHCk~Gkgrtg~~icA~L~~~~~~~ta~eald~~~~kR---~~~ 152 (434)
T KOG2283|consen 78 FGFDDHNPPP-LELLCPFCKSMDNWLSEDP-KNVVVVHCKAGKGRTGVMICAYLIYSGISATAEEALDYFNEKR---FDE 152 (434)
T ss_pred cCCCCCCCCc-HHHHHHHHHCHHHHHhcCc-cceEEEEccCCCcceEEEEeHHHHhhhhcCCHHHHHHHHhhhh---ccc
Confidence 6899998875 5567777778888877655 34689999999999999988888877766 466677766553 121
Q ss_pred C--CCCCChhhhccccHHHHHHH
Q psy8773 1636 P--AMVQTEHLYTSSPFSEQLAL 1656 (1773)
Q Consensus 1636 P--gmVqT~eQY~~~~f~Y~~~~ 1656 (1773)
. +-+....|-+ |+|..-.
T Consensus 153 ~~~~~~~~PSq~R---Yv~Y~~~ 172 (434)
T KOG2283|consen 153 GKSKGVTIPSQRR---YVGYFSR 172 (434)
T ss_pred cccCCccCchhhH---HHHHHHH
Confidence 2 3456667777 7766544
No 64
>KOG1716|consensus
Probab=93.64 E-value=0.25 Score=59.20 Aligned_cols=81 Identities=21% Similarity=0.428 Sum_probs=49.6
Q ss_pred eEEecCCCCCCCCCChh--hHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHHHHH
Q psy8773 1554 QFQLIDWPEQGVPKSGD--GFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRIL 1631 (1773)
Q Consensus 1554 qfQ~~~WPd~gvP~s~~--~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtVK~l 1631 (1773)
.|+|..-|-.+-|...- -+-+.+.-+++...+ +|-|+|||.+|++||.+++.+|++... -...=++.+.+
T Consensus 121 ~~~y~~i~~~D~~~~~i~~~~~~~~~fI~~a~~~---~~~vlVHC~~GvSRSat~viAYlM~~~-----~~~l~~A~~~v 192 (285)
T KOG1716|consen 121 GIKYLRIPVEDNPSTDILQHFPEAISFIEKAREK---GGKVLVHCQAGVSRSATLVIAYLMKYE-----GLSLEDAYELV 192 (285)
T ss_pred CceEEeccccCCccccHHHHHHHHHHHHHHHHhC---CCeEEEEcCCccchhHHHHHHHHHHHc-----CCCHHHHHHHH
Confidence 45566666433333211 122223333333333 679999999999999999999986543 34555666677
Q ss_pred HhcCCCCCCCh
Q psy8773 1632 RTQRPAMVQTE 1642 (1773)
Q Consensus 1632 R~~RPgmVqT~ 1642 (1773)
+..||-+.-+.
T Consensus 193 k~~R~~i~PN~ 203 (285)
T KOG1716|consen 193 KSRRPIISPNF 203 (285)
T ss_pred HHhCCccCCCH
Confidence 77777665543
No 65
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=93.28 E-value=0.18 Score=53.88 Aligned_cols=39 Identities=21% Similarity=0.448 Sum_probs=30.7
Q ss_pred CCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHHHHHHhc
Q psy8773 1589 DGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRILRTQ 1634 (1773)
Q Consensus 1589 ~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtVK~lR~~ 1634 (1773)
++||++||..|- |||++.|+....+. ++.-++++..|..
T Consensus 86 ~~pvL~HC~sG~-Rt~~l~al~~~~~g------~~~~~i~~~~~~~ 124 (135)
T TIGR01244 86 EGPVLAYCRSGT-RSSLLWGFRQAAEG------VPVEEIVRRAQAA 124 (135)
T ss_pred CCCEEEEcCCCh-HHHHHHHHHHHHcC------CCHHHHHHHHHHc
Confidence 579999999999 99999998776643 5666667776654
No 66
>KOG2283|consensus
Probab=93.19 E-value=0.21 Score=62.78 Aligned_cols=88 Identities=23% Similarity=0.370 Sum_probs=57.7
Q ss_pred cCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCceeehhHHHHHHHHhc--CCccCHHH
Q psy8773 378 TAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKH--DKTVDIYG 455 (1773)
Q Consensus 378 t~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTGtFIaID~ll~~l~~--e~~VdV~~ 455 (1773)
..||||++| .-..+..|.+.+..+-... +..=+||||-+|-||||+.|..-.+...+.. +..++.+.
T Consensus 78 ~~~~Dh~~P-~L~~l~~~c~~~~~WL~~d----------~~nVvvvHCk~Gkgrtg~~icA~L~~~~~~~ta~eald~~~ 146 (434)
T KOG2283|consen 78 FGFDDHNPP-PLELLCPFCKSMDNWLSED----------PKNVVVVHCKAGKGRTGVMICAYLIYSGISATAEEALDYFN 146 (434)
T ss_pred cCCCCCCCC-cHHHHHHHHHCHHHHHhcC----------ccceEEEEccCCCcceEEEEeHHHHhhhhcCCHHHHHHHHh
Confidence 699999999 5667788888887775543 2345899999999999999876665555432 23344333
Q ss_pred HHHHHHHhcc--cCCCCHHHHHHHHH
Q psy8773 456 HVTCLRAQRN--YMVQTEDQYMFIHD 479 (1773)
Q Consensus 456 iV~~LR~qR~--~mVQT~eQY~FIy~ 479 (1773)
.- |-... +-+-.+.|-.|++.
T Consensus 147 ~k---R~~~~~~~~~~~PSq~RYv~Y 169 (434)
T KOG2283|consen 147 EK---RFDEGKSKGVTIPSQRRYVGY 169 (434)
T ss_pred hh---hccccccCCccCchhhHHHHH
Confidence 22 21112 34566777777654
No 67
>COG5350 Predicted protein tyrosine phosphatase [General function prediction only]
Probab=93.17 E-value=0.43 Score=51.71 Aligned_cols=84 Identities=21% Similarity=0.288 Sum_probs=55.6
Q ss_pred EEEEEEecCCCCCC-CCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCceeehhHHHHHHHHhcCC
Q psy8773 371 EIKQLQFTAWPDHG-VPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDK 449 (1773)
Q Consensus 371 ~V~hfhYt~WPD~G-VP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTGtFIaID~ll~~l~~e~ 449 (1773)
--.||+=+.-||.| .-..+..+...+..++..-. ..|++|||-+|||||-....+- -+.-..
T Consensus 58 L~l~fnDI~~~~~g~~ap~e~Hv~~i~DF~~~wp~-------------~apllIHC~aGISRStA~A~i~----a~ala~ 120 (172)
T COG5350 58 LTLHFNDIAEPDDGWIAPGEAHVRAIIDFADEWPR-------------FAPLLIHCYAGISRSTAAALIA----ALALAP 120 (172)
T ss_pred eeEeeccccCCCccccCCCHHHHHHHHHHHhcCcc-------------ccceeeeeccccccchHHHHHH----HHhhcc
Confidence 44556666677777 43455666666666655432 4699999999999996654432 222234
Q ss_pred ccCHHHHHHHHHHhcccCCCCH
Q psy8773 450 TVDIYGHVTCLRAQRNYMVQTE 471 (1773)
Q Consensus 450 ~VdV~~iV~~LR~qR~~mVQT~ 471 (1773)
..|=.++-..||.-++.+-.|.
T Consensus 121 ~~de~ela~~Lra~sp~atPN~ 142 (172)
T COG5350 121 DMDETELAERLRALSPYATPNP 142 (172)
T ss_pred ccChHHHHHHHHhcCcccCCCh
Confidence 4566778889999998886664
No 68
>COG5350 Predicted protein tyrosine phosphatase [General function prediction only]
Probab=92.42 E-value=0.35 Score=52.39 Aligned_cols=78 Identities=22% Similarity=0.317 Sum_probs=51.2
Q ss_pred eEEecCCCCCC-CCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhH--HHHHHHHHhhcccCCcCHHHHHHH
Q psy8773 1554 QFQLIDWPEQG-VPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVF--ITLSIVLERMQYEGVIDLFQTVRI 1630 (1773)
Q Consensus 1554 qfQ~~~WPd~g-vP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvF--cAl~~lleqlk~E~~VDVFQtVK~ 1630 (1773)
+|.=+.-|++| +-+....+..+++-+++|-+ ..|++|||..|+|||... +|... +.+ ..|=-++.+.
T Consensus 61 ~fnDI~~~~~g~~ap~e~Hv~~i~DF~~~wp~----~apllIHC~aGISRStA~A~i~a~a-la~-----~~de~ela~~ 130 (172)
T COG5350 61 HFNDIAEPDDGWIAPGEAHVRAIIDFADEWPR----FAPLLIHCYAGISRSTAAALIAALA-LAP-----DMDETELAER 130 (172)
T ss_pred eeccccCCCccccCCCHHHHHHHHHHHhcCcc----ccceeeeeccccccchHHHHHHHHh-hcc-----ccChHHHHHH
Confidence 34444455555 44455566677777777754 459999999999999763 22222 222 3566677899
Q ss_pred HHhcCCCCCCC
Q psy8773 1631 LRTQRPAMVQT 1641 (1773)
Q Consensus 1631 lR~~RPgmVqT 1641 (1773)
||.-+|.+--+
T Consensus 131 Lra~sp~atPN 141 (172)
T COG5350 131 LRALSPYATPN 141 (172)
T ss_pred HHhcCcccCCC
Confidence 99999977554
No 69
>KOG1718|consensus
Probab=92.04 E-value=0.41 Score=52.57 Aligned_cols=45 Identities=24% Similarity=0.403 Sum_probs=31.7
Q ss_pred CCCEEEEcCCCCccchhHhHHHHHHHHHhhCCCcchHHHHHHHHhccccc
Q psy8773 929 VGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYM 978 (1773)
Q Consensus 929 ~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~VDVf~~Vk~LR~QR~~m 978 (1773)
.|-.+|||-|||.||+++|.+..+-. ...++.++-..+...|+-.
T Consensus 94 gG~TLvHC~AGVSRSAsLClAYLmK~-----~~msLreAy~~vKa~RpiI 138 (198)
T KOG1718|consen 94 GGKTLVHCVAGVSRSASLCLAYLMKY-----HCMSLREAYHWVKARRPII 138 (198)
T ss_pred CCcEEEEEccccchhHHHHHHHHHHH-----ccchHHHHHHHHHhhCcee
Confidence 47899999999999999998765432 2345555555555555543
No 70
>PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B.
Probab=91.18 E-value=0.15 Score=55.86 Aligned_cols=38 Identities=18% Similarity=0.095 Sum_probs=22.7
Q ss_pred eEEEecCCCcccHHHHHHHHHhccccEEEEcccccccCc
Q psy8773 1364 AYIATQGPLADTTEDFWRMLWEHNSTIVVMLTKLKEMGR 1402 (1773)
Q Consensus 1364 ~fI~TQ~Pl~~Tv~DFWrMV~e~~~~~IVmL~~~~e~~~ 1402 (1773)
-+.=+=.|-.-|-+|.+++. +.++.+||=|-...|..+
T Consensus 20 ~lyRS~~l~~lt~~d~~~L~-~lgI~tIiDLRs~~E~~~ 57 (164)
T PF13350_consen 20 RLYRSGNLSNLTEADLERLR-ELGIRTIIDLRSPTERER 57 (164)
T ss_dssp SEEEES--TT--HHHHHHHH-HTT--EEEE-S-HHHHHH
T ss_pred cEEecCCcCcCCHHHHHHHH-hCCCCEEEECCCcccccc
Confidence 34445566778889999888 999999999987766543
No 71
>KOG0196|consensus
Probab=90.81 E-value=0.8 Score=60.25 Aligned_cols=94 Identities=31% Similarity=0.467 Sum_probs=59.3
Q ss_pred eeEEEEeecCCCceeEEEEEE--------------------------------eeecCCCCceEEeeCCCccCCCc--eE
Q psy8773 51 ETECTISELSPFTTYSVNISL--------------------------------RAHDVSTHSMTLSWSPPIKLNPV--KY 96 (1773)
Q Consensus 51 ~~~~t~~~L~p~t~Y~~~v~~--------------------------------~~~~~~~~~~~~~~s~~~~~~~~--~~ 96 (1773)
+++++|++|.|-|.|++.|.. +...+.+.+++|+|+.|-..|.. .|
T Consensus 397 ~~~V~v~~L~ah~~YTFeV~AvNgVS~lsp~~~~~a~vnItt~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildY 476 (996)
T KOG0196|consen 397 ETSVTVSDLLAHTNYTFEVEAVNGVSDLSPFPRQFASVNITTNQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDY 476 (996)
T ss_pred cceEEEeccccccccEEEEEEeecccccCCCCCcceeEEeeccccCCCccceEEEeeeccCceEEecCCCCCCCCcceeE
Confidence 467999999999999999943 11122445678888887554432 45
Q ss_pred EEeecchhhhhcccCcccccccccccccccCcccceeccCCCcceEEEEEEeecCCCCCC
Q psy8773 97 KISLDAVKEFVDSQGITQTQIVPRRTLFLEPTETECTISELSPFTTYSVNIRRRQPRKYP 156 (1773)
Q Consensus 97 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 156 (1773)
.|.+..- ..++..- +.+ ....|..++.+|.|.|.|-+.||.|..-+++
T Consensus 477 Evky~ek--~~~e~~~---------~~~-~t~~~~~ti~gL~p~t~YvfqVRarT~aG~G 524 (996)
T KOG0196|consen 477 EVKYYEK--DEDERSY---------STL-KTKTTTATITGLKPGTVYVFQVRARTAAGYG 524 (996)
T ss_pred EEEEeec--cccccce---------eEE-ecccceEEeeccCCCcEEEEEEEEecccCCC
Confidence 5544322 1111110 001 1224556899999999999999998766544
No 72
>KOG1717|consensus
Probab=90.80 E-value=0.45 Score=55.37 Aligned_cols=53 Identities=17% Similarity=0.364 Sum_probs=35.1
Q ss_pred HHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHHHHHHh
Q psy8773 1576 IGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRILRT 1633 (1773)
Q Consensus 1576 I~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtVK~lR~ 1633 (1773)
|.-++..+.+ +.-++|||-+|+.||-|.|++|++-.- .. ..=|.|+.||+-+.
T Consensus 241 IsfIdeArsk---~cgvLVHClaGISRSvTvtvaYLMqkl-~l-slndAyd~Vk~kks 293 (343)
T KOG1717|consen 241 ISFIDEARSK---NCGVLVHCLAGISRSVTVTVAYLMQKL-NL-SLNDAYDFVKHKKS 293 (343)
T ss_pred HHHHHHhhcc---CCcEEEeeeccccchhHHHHHHHHHHh-cc-chhhHHHHHHHhcc
Confidence 3344444443 557999999999999999999885433 22 12356666765443
No 73
>PLN02727 NAD kinase
Probab=90.58 E-value=0.29 Score=65.53 Aligned_cols=43 Identities=23% Similarity=0.313 Sum_probs=33.9
Q ss_pred CCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHH
Q psy8773 1565 VPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIV 1612 (1773)
Q Consensus 1565 vP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~l 1612 (1773)
.+++.+.+.+|.+.++... .+||++||..|.+|||++.|+|.+
T Consensus 322 ~apt~EqVe~fa~~l~~sl-----pkPVLvHCKSGarRAGamvA~yl~ 364 (986)
T PLN02727 322 TAPSAEQVEKFASLVSDSS-----KKPIYLHSKEGVWRTSAMVSRWKQ 364 (986)
T ss_pred CCCCHHHHHHHHHHHHhhc-----CCCEEEECCCCCchHHHHHHHHHH
Confidence 4456677777777774321 569999999999999999999996
No 74
>KOG1716|consensus
Probab=90.24 E-value=0.59 Score=56.03 Aligned_cols=49 Identities=20% Similarity=0.387 Sum_probs=40.1
Q ss_pred CCCEEEEcCCCCccchhHhHHHHHHHHHhhCCCcchHHHHHHHHhccccccCCh
Q psy8773 929 VGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTE 982 (1773)
Q Consensus 929 ~gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~VDVf~~Vk~LR~QR~~mVQT~ 982 (1773)
.|-++|||.+|++||.|++++.+|... ...+.++.+.++..|+....+.
T Consensus 155 ~~~vlVHC~~GvSRSat~viAYlM~~~-----~~~l~~A~~~vk~~R~~i~PN~ 203 (285)
T KOG1716|consen 155 GGKVLVHCQAGVSRSATLVIAYLMKYE-----GLSLEDAYELVKSRRPIISPNF 203 (285)
T ss_pred CCeEEEEcCCccchhHHHHHHHHHHHc-----CCCHHHHHHHHHHhCCccCCCH
Confidence 478999999999999999998876643 5677788888888888876643
No 75
>PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B.
Probab=89.98 E-value=0.35 Score=52.98 Aligned_cols=38 Identities=26% Similarity=0.202 Sum_probs=23.8
Q ss_pred ceEEecCCCCCChhhhhhheeecCCcEEEEccCcccccc
Q psy8773 796 AYVATQGPLQETLGDFWRMVWELRSVTIVMMTKLEERTR 834 (1773)
Q Consensus 796 ~yIaTQgPL~~Tv~DFWrMVwE~~v~vIVMLt~l~E~gk 834 (1773)
.++=+=.|..-|.+|.+.+. +.++++||=|-...|..+
T Consensus 20 ~lyRS~~l~~lt~~d~~~L~-~lgI~tIiDLRs~~E~~~ 57 (164)
T PF13350_consen 20 RLYRSGNLSNLTEADLERLR-ELGIRTIIDLRSPTERER 57 (164)
T ss_dssp SEEEES--TT--HHHHHHHH-HTT--EEEE-S-HHHHHH
T ss_pred cEEecCCcCcCCHHHHHHHH-hCCCCEEEECCCcccccc
Confidence 44555667777899999888 999999999999888654
No 76
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=88.70 E-value=1 Score=48.12 Aligned_cols=57 Identities=19% Similarity=0.262 Sum_probs=39.4
Q ss_pred ChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCceeehhHHHHHHHHhcCCccCHHHHHHHHHHhccc
Q psy8773 388 HPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNY 466 (1773)
Q Consensus 388 ~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTGtFIaID~ll~~l~~e~~VdV~~iV~~LR~qR~~ 466 (1773)
+...+..|.+.+... .+|+++||.+|- |||.+.++.... . -++...++...|..-..
T Consensus 71 ~~~~v~~f~~~~~~~---------------~~pvL~HC~sG~-Rt~~l~al~~~~-----~-g~~~~~i~~~~~~~G~~ 127 (135)
T TIGR01244 71 TPDDVETFRAAIGAA---------------EGPVLAYCRSGT-RSSLLWGFRQAA-----E-GVPVEEIVRRAQAAGYD 127 (135)
T ss_pred CHHHHHHHHHHHHhC---------------CCCEEEEcCCCh-HHHHHHHHHHHH-----c-CCCHHHHHHHHHHcCCC
Confidence 455566666666421 479999999999 999988754322 2 26888888888776543
No 77
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=87.82 E-value=0.58 Score=48.59 Aligned_cols=51 Identities=20% Similarity=0.425 Sum_probs=28.4
Q ss_pred EEecCCCCCCCCCChhhHHHHHHHHHHHhhhcCCCCCEEEEecCCCCcchhHHHHHHH
Q psy8773 1555 FQLIDWPEQGVPKSGDGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIV 1612 (1773)
Q Consensus 1555 fQ~~~WPd~gvP~s~~~lidlI~~V~k~q~~~~~~gPIvVHCs~G~GRTGvFcAl~~l 1612 (1773)
++|.+-|-.+-..+.+.+..|.+.+... .+||+|||..|. |++++.+|.-.
T Consensus 58 l~y~~iPv~~~~~~~~~v~~f~~~l~~~------~~Pvl~hC~sG~-Ra~~l~~l~~~ 108 (110)
T PF04273_consen 58 LQYVHIPVDGGAITEEDVEAFADALESL------PKPVLAHCRSGT-RASALWALAQA 108 (110)
T ss_dssp -EEEE----TTT--HHHHHHHHHHHHTT------TTSEEEE-SCSH-HHHHHHHHHHH
T ss_pred CeEEEeecCCCCCCHHHHHHHHHHHHhC------CCCEEEECCCCh-hHHHHHHHHhh
Confidence 3444455322223455555555444321 579999999998 99999988754
No 78
>COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms]
Probab=87.08 E-value=0.76 Score=54.12 Aligned_cols=32 Identities=38% Similarity=0.612 Sum_probs=27.9
Q ss_pred CCCEEEEecCCCCcchhHHHHHHHHHhhcccC
Q psy8773 1589 DGPITVHCSAGVGRTGVFITLSIVLERMQYEG 1620 (1773)
Q Consensus 1589 ~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~ 1620 (1773)
++||++||..|.-|||+..||+..+.+...+.
T Consensus 136 ~~PvL~HC~~GkdRTGl~~al~r~~~~~~~~~ 167 (249)
T COG2365 136 NGPVLIHCTAGKDRTGLVAALYRKLVGGSDET 167 (249)
T ss_pred cCCEEEecCCCCcchHHHHHHHHHHhCCchhH
Confidence 68999999999999999999999887755544
No 79
>KOG4221|consensus
Probab=86.66 E-value=2.6 Score=57.89 Aligned_cols=99 Identities=28% Similarity=0.410 Sum_probs=65.8
Q ss_pred cCCCeeEEEEeecCCCceeEEEEE-----------------------------EeeecCCCCceEEeeCCCcc----CCC
Q psy8773 47 LEPTETECTISELSPFTTYSVNIS-----------------------------LRAHDVSTHSMTLSWSPPIK----LNP 93 (1773)
Q Consensus 47 ~~~~~~~~t~~~L~p~t~Y~~~v~-----------------------------~~~~~~~~~~~~~~~s~~~~----~~~ 93 (1773)
++.+.+.+||++|+|.|.|.+.|- ++.-.+++..+.+.|++|.+ ..-
T Consensus 569 ~~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~Tlsd~PsaPP~Nl~lev~sStsVrVsW~pP~~~t~ng~i 648 (1381)
T KOG4221|consen 569 VENNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVRTLSDVPSAPPQNLSLEVVSSTSVRVSWLPPPSETQNGQI 648 (1381)
T ss_pred EecCccEEEeecCCCccceEEEEEEecCCCCCCCCCceEEEeccCCCCCCCcceEEEecCCCeEEEEccCCCcccccceE
Confidence 566778999999999999999982 22223356678888888643 223
Q ss_pred ceEEEeecchhhhhcccCcccccccccccccccCcccceeccCCCcceEEEEEEeecCCCCCC
Q psy8773 94 VKYKISLDAVKEFVDSQGITQTQIVPRRTLFLEPTETECTISELSPFTTYSVNIRRRQPRKYP 156 (1773)
Q Consensus 94 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 156 (1773)
..|+|-.+++ -.+.....+.. .-..+...+++|.+-|.|.++|.+..+.+..
T Consensus 649 tgYkIRy~~~---~~~~~~~~t~v--------~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtG 700 (1381)
T KOG4221|consen 649 TGYKIRYRKL---SREDEVNETVV--------KGNTTQYLFNGLEPNTQYRVRISAMTVNGTG 700 (1381)
T ss_pred EEEEEEeccc---Ccccccceeec--------ccchhhhHhhcCCCCceEEEEEEEeccCCCC
Confidence 4678877766 11111111111 1134455688999999999999998887554
No 80
>KOG1719|consensus
Probab=86.37 E-value=3 Score=45.63 Aligned_cols=59 Identities=24% Similarity=0.242 Sum_probs=46.4
Q ss_pred CCEEEEcCCCCccchhHhHHHHHHHHHhhCCCcchHHHHHHHHhccccccCChhhhhhHHHHHHHHHH
Q psy8773 930 GPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYGHVTCLRAQRNYMVQTEDQYMFIHDALLEAVL 997 (1773)
Q Consensus 930 gPIVVHCSaGVGRTGtFIAId~lLeql~~e~~VDVf~~Vk~LR~QR~~mVQT~eQY~FiY~aLlEyl~ 997 (1773)
.-+-|||-||-|||.|.++...+.. +.-....++..+|+.|+...--+.|.. ++.||..
T Consensus 110 ktvYVHCKAGRtRSaTvV~cYLmq~-----~~wtpe~A~~~vr~iRp~VlL~~~Qw~----~l~ef~~ 168 (183)
T KOG1719|consen 110 KTVYVHCKAGRTRSATVVACYLMQH-----KNWTPEAAVEHVRKIRPRVLLRPAQWD----VLKEFYK 168 (183)
T ss_pred CeEEEEecCCCccchhhhhhhhhhh-----cCCCHHHHHHHHHhcCcceeecHHHHH----HHHHHHH
Confidence 4689999999999999988765432 345677889999999999988888874 5555543
No 81
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=79.83 E-value=1.8 Score=44.96 Aligned_cols=38 Identities=16% Similarity=0.423 Sum_probs=27.6
Q ss_pred CChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHH
Q psy8773 899 HPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAM 952 (1773)
Q Consensus 899 s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~l 952 (1773)
+.+.+..|.+.+... .+||++||..|. |++++.++...
T Consensus 71 ~~~~v~~f~~~l~~~---------------~~Pvl~hC~sG~-Ra~~l~~l~~~ 108 (110)
T PF04273_consen 71 TEEDVEAFADALESL---------------PKPVLAHCRSGT-RASALWALAQA 108 (110)
T ss_dssp -HHHHHHHHHHHHTT---------------TTSEEEE-SCSH-HHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhC---------------CCCEEEECCCCh-hHHHHHHHHhh
Confidence 456677776666543 479999999998 99999887654
No 82
>COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms]
Probab=78.23 E-value=2.8 Score=49.45 Aligned_cols=27 Identities=33% Similarity=0.688 Sum_probs=23.1
Q ss_pred CCCEEEEcCCCCccchhHhHHHHHHHH
Q psy8773 929 VGPLIVHCSAGVGRTGCFIVIDAMIER 955 (1773)
Q Consensus 929 ~gPIVVHCSaGVGRTGtFIAId~lLeq 955 (1773)
++|+++||.+|--|||..+|+...+..
T Consensus 136 ~~PvL~HC~~GkdRTGl~~al~r~~~~ 162 (249)
T COG2365 136 NGPVLIHCTAGKDRTGLVAALYRKLVG 162 (249)
T ss_pred cCCEEEecCCCCcchHHHHHHHHHHhC
Confidence 489999999999999999998755443
No 83
>KOG1717|consensus
Probab=75.72 E-value=2.8 Score=49.18 Aligned_cols=26 Identities=31% Similarity=0.440 Sum_probs=21.3
Q ss_pred CCCEEEEcCCCCccchhHhHHHHHHH
Q psy8773 929 VGPLIVHCSAGVGRTGCFIVIDAMIE 954 (1773)
Q Consensus 929 ~gPIVVHCSaGVGRTGtFIAId~lLe 954 (1773)
+.-++|||-|||.|+-|.+++..|-.
T Consensus 251 ~cgvLVHClaGISRSvTvtvaYLMqk 276 (343)
T KOG1717|consen 251 NCGVLVHCLAGISRSVTVTVAYLMQK 276 (343)
T ss_pred CCcEEEeeeccccchhHHHHHHHHHH
Confidence 35699999999999999998765443
No 84
>KOG4471|consensus
Probab=74.32 E-value=3.4 Score=52.95 Aligned_cols=25 Identities=28% Similarity=0.623 Sum_probs=21.9
Q ss_pred CCCEEEEcCCCCccchhHhHHHHHH
Q psy8773 929 VGPLIVHCSAGVGRTGCFIVIDAMI 953 (1773)
Q Consensus 929 ~gPIVVHCSaGVGRTGtFIAId~lL 953 (1773)
..|++||||||=.||..+.++..+|
T Consensus 374 ~~sVlVHCSDGWDRT~QlvsLA~Ll 398 (717)
T KOG4471|consen 374 SRSVLVHCSDGWDRTAQLVSLAMLL 398 (717)
T ss_pred CceEEEEcCCCccchHHHHHHHHHH
Confidence 4799999999999999998887654
No 85
>KOG4471|consensus
Probab=74.08 E-value=3.7 Score=52.69 Aligned_cols=26 Identities=35% Similarity=0.667 Sum_probs=23.1
Q ss_pred CCCEEEEecCCCCcchhHHHHHHHHH
Q psy8773 1589 DGPITVHCSAGVGRTGVFITLSIVLE 1614 (1773)
Q Consensus 1589 ~gPIvVHCs~G~GRTGvFcAl~~lle 1614 (1773)
..||+||||||=-||.-+.|++.++-
T Consensus 374 ~~sVlVHCSDGWDRT~QlvsLA~LlL 399 (717)
T KOG4471|consen 374 SRSVLVHCSDGWDRTAQLVSLAMLLL 399 (717)
T ss_pred CceEEEEcCCCccchHHHHHHHHHHh
Confidence 56999999999999999999988653
No 86
>PLN02727 NAD kinase
Probab=73.34 E-value=4.1 Score=55.21 Aligned_cols=40 Identities=20% Similarity=0.207 Sum_probs=31.6
Q ss_pred CChhHHHHHHHHHhhCCCCCCCcCCCCCCCCCCEEEEcCCCCccchhHhHHHHH
Q psy8773 899 HPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAM 952 (1773)
Q Consensus 899 s~~~lL~fl~~V~~~~~~~~~~~~~~~~~~~gPIVVHCSaGVGRTGtFIAId~l 952 (1773)
+.+.+.+|.+.++... ..||++||-.|.+|||++.|+...
T Consensus 325 t~EqVe~fa~~l~~sl--------------pkPVLvHCKSGarRAGamvA~yl~ 364 (986)
T PLN02727 325 SAEQVEKFASLVSDSS--------------KKPIYLHSKEGVWRTSAMVSRWKQ 364 (986)
T ss_pred CHHHHHHHHHHHHhhc--------------CCCEEEECCCCCchHHHHHHHHHH
Confidence 5677888887774421 479999999999999999998743
No 87
>KOG2386|consensus
Probab=62.95 E-value=12 Score=46.96 Aligned_cols=132 Identities=18% Similarity=0.208 Sum_probs=78.5
Q ss_pred CCCCCCCCCChhhHHHHHHHHHHHhhhcC-CCCCEEEEecCCCCcchhHHHHHHHHHhhcccCCcCHHHHHHHHHhcCCC
Q psy8773 1559 DWPEQGVPKSGDGFIDFIGQVHKTKEQFG-QDGPITVHCSAGVGRTGVFITLSIVLERMQYEGVIDLFQTVRILRTQRPA 1637 (1773)
Q Consensus 1559 ~WPd~gvP~s~~~lidlI~~V~k~q~~~~-~~gPIvVHCs~G~GRTGvFcAl~~lleqlk~E~~VDVFQtVK~lR~~RPg 1637 (1773)
.-+.+++-++....-.++..|++-..... .+.=|.|||.-|.-|||=+++.+++... -.-+-++++.+-..||.
T Consensus 93 ~c~g~~~vp~~~~v~~fv~~v~~f~~~~~~~~~LI~vhcthG~NrtgyLI~~yL~~~~-----~~s~~~aik~f~~~r~~ 167 (393)
T KOG2386|consen 93 NCPGRGVVPRTELVDKFVKLVKGFVDDTKLDDELIGVHCTHGLNRTGYLICAYLADVG-----GYSSSEAIKRFADARPP 167 (393)
T ss_pred ccCCcccCCCccchHHHHHHHHHHHhcccCCCCEEEEeCCCcccccceeeeeeeeecc-----CccHHHHHHHHHHhCCC
Confidence 33445533334445555666665554221 2456999999999999999888876654 37788999999999998
Q ss_pred CCCChhhhccccHHHHHHHHhhcCCCCCCCCCCCCCCCCC-CCCceEEEecCCCceeeehHHHHH
Q psy8773 1638 MVQTEHLYTSSPFSEQLALDMREVPPGPPLKRPDPNIPGD-VPPVHVIVEHNSPGLLWIIGPIIA 1701 (1773)
Q Consensus 1638 mVqT~eQY~~~~f~Y~~~~ey~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 1701 (1773)
-+.-.+-+. -+|.. |-+.++.-.+++.-+.--.. -...-++..|-.-|+..-.++|.+
T Consensus 168 gi~k~dyi~---~L~~~---~~~~~p~~vs~p~~~~~~~~~~~~~~~~~~~~~Dg~i~t~~~~pg 226 (393)
T KOG2386|consen 168 GIEKQDYID---ALYSR---YHDIFPFKVSCPSMPDWKRSIKLKKPVHKLHGNDGLIFTPAEIPG 226 (393)
T ss_pred ccCchHHHH---HHhhc---ccccccccccCCCCcchhhhhhhccccccccccCCCcCCcccCcc
Confidence 887766666 33332 33444444333333322111 111111112556677777777766
No 88
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=59.68 E-value=19 Score=33.79 Aligned_cols=72 Identities=31% Similarity=0.421 Sum_probs=45.5
Q ss_pred EeeecCCCCceEEeeCCCc--cCCCceEEEeecchhhhhcccCcccccccccccccccCcccceeccCCCcceEEEEEEe
Q psy8773 71 LRAHDVSTHSMTLSWSPPI--KLNPVKYKISLDAVKEFVDSQGITQTQIVPRRTLFLEPTETECTISELSPFTTYSVNIR 148 (1773)
Q Consensus 71 ~~~~~~~~~~~~~~~s~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 148 (1773)
+...+...+.+.|+|.+|. .-....|.|.+....... ......+ ....+...+.+|.|.+.|.+.|+
T Consensus 6 l~v~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~----~~~~~~~-------~~~~~~~~i~~L~p~t~Y~~~v~ 74 (85)
T PF00041_consen 6 LSVSNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTS----DWQEVTV-------PGNETSYTITGLQPGTTYEFRVR 74 (85)
T ss_dssp EEEEEECSSEEEEEEEESSSTSSSESEEEEEEEETTSSS----EEEEEEE-------ETTSSEEEEESCCTTSEEEEEEE
T ss_pred eEEEECCCCEEEEEEECCCCCCCCeeEEEEEEEecccce----eeeeeee-------eeeeeeeeeccCCCCCEEEEEEE
Confidence 3444556778999999985 333457888886652211 1111111 12234678999999999999998
Q ss_pred ecCCC
Q psy8773 149 RRQPR 153 (1773)
Q Consensus 149 ~~~~~ 153 (1773)
.....
T Consensus 75 a~~~~ 79 (85)
T PF00041_consen 75 AVNSD 79 (85)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 86544
No 89
>KOG4221|consensus
Probab=59.44 E-value=39 Score=47.31 Aligned_cols=93 Identities=26% Similarity=0.390 Sum_probs=57.7
Q ss_pred eEEEEeecCCCceeEEEEEEeeecC-------------------------CCCceEEeeCCCccCCC--ceEEEeecchh
Q psy8773 52 TECTISELSPFTTYSVNISLRAHDV-------------------------STHSMTLSWSPPIKLNP--VKYKISLDAVK 104 (1773)
Q Consensus 52 ~~~t~~~L~p~t~Y~~~v~~~~~~~-------------------------~~~~~~~~~s~~~~~~~--~~~~i~~~~~~ 104 (1773)
.+.|+..|.|.|.|-|.|......+ +...+.++|.+|.--|. ..|++-+-.
T Consensus 483 ~~~tv~nl~p~t~Y~~rv~A~n~~g~g~sS~pLkV~t~pEgp~~~~a~ats~~ti~v~WepP~~~n~~I~~yk~~ys~-- 560 (1381)
T KOG4221|consen 483 IQVTVQNLSPLTMYFFRVRAKNEAGSGESSAPLKVTTQPEGPVQLQAYATSPTTILVTWEPPPFGNGPITGYKLFYSE-- 560 (1381)
T ss_pred eEEEeeecccceeEEEEEeccCcccCCccCCceEEecCCCCCccccccccCcceEEEEecCCCCCCCCceEEEEEEEc--
Confidence 7799999999999999996522211 22245667777652111 134332211
Q ss_pred hhhcccCcccccccccccccccCcccceeccCCCcceEEEEEEeecCCCCCCCC
Q psy8773 105 EFVDSQGITQTQIVPRRTLFLEPTETECTISELSPFTTYSVNIRRRQPRKYPES 158 (1773)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 158 (1773)
- ..+..+. ....+++.++++|.++|-|++++.+++..+...+
T Consensus 561 --~-~~~~~~~---------~~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~s 602 (1381)
T KOG4221|consen 561 --D-DTGKELR---------VENNATEYTINGLEKYTEYSIRVVAYNSAGSGVS 602 (1381)
T ss_pred --C-CCCceEE---------EecCccEEEeecCCCccceEEEEEEecCCCCCCC
Confidence 1 1122221 1345677799999999999999999887655444
No 90
>PF06602 Myotub-related: Myotubularin-like phosphatase domain; InterPro: IPR010569 This family represents a region within eukaryotic myotubularin-related proteins that is sometimes found with IPR004182 from INTERPRO. Myotubularin is a dual-specific lipid phosphatase that dephosphorylates phosphatidylinositol 3-phosphate and phosphatidylinositol (3,5)-bi-phosphate []. Mutations in gene encoding myotubularin-related proteins have been associated with disease [].; GO: 0016791 phosphatase activity, 0016311 dephosphorylation; PDB: 1M7R_B 1LW3_A 1ZVR_A 1ZSQ_A 2YF0_A.
Probab=54.28 E-value=16 Score=45.38 Aligned_cols=26 Identities=35% Similarity=0.560 Sum_probs=21.9
Q ss_pred CCCEEEEecCCCCcchhHHHHHHHHH
Q psy8773 1589 DGPITVHCSAGVGRTGVFITLSIVLE 1614 (1773)
Q Consensus 1589 ~gPIvVHCs~G~GRTGvFcAl~~lle 1614 (1773)
+.+|+|||++|-.||..+++|..++-
T Consensus 231 ~~~Vlvh~~dGwDrt~q~~sL~ql~l 256 (353)
T PF06602_consen 231 GSSVLVHCSDGWDRTSQLSSLAQLLL 256 (353)
T ss_dssp --EEEEECTTSSSHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCcccHHHHHHHHHHH
Confidence 56999999999999999999887664
No 91
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=53.72 E-value=10 Score=35.58 Aligned_cols=28 Identities=32% Similarity=0.387 Sum_probs=22.9
Q ss_pred cCCCeeEEEEeecCCCceeEEEEEEeee
Q psy8773 47 LEPTETECTISELSPFTTYSVNISLRAH 74 (1773)
Q Consensus 47 ~~~~~~~~t~~~L~p~t~Y~~~v~~~~~ 74 (1773)
...+.+.++|.+|+|+|.|.+.|.....
T Consensus 51 ~~~~~~~~~i~~L~p~t~Y~~~v~a~~~ 78 (85)
T PF00041_consen 51 VPGNETSYTITGLQPGTTYEFRVRAVNS 78 (85)
T ss_dssp EETTSSEEEEESCCTTSEEEEEEEEEET
T ss_pred eeeeeeeeeeccCCCCCEEEEEEEEEeC
Confidence 4455668999999999999999987443
No 92
>KOG1572|consensus
Probab=40.16 E-value=39 Score=39.74 Aligned_cols=27 Identities=33% Similarity=0.596 Sum_probs=22.8
Q ss_pred CCCEEEEecCCCCcchhHHHHHHHHHh
Q psy8773 1589 DGPITVHCSAGVGRTGVFITLSIVLER 1615 (1773)
Q Consensus 1589 ~gPIvVHCs~G~GRTGvFcAl~~lleq 1615 (1773)
+-|+++||.-|--|||+.++|.--++.
T Consensus 148 N~P~Lihc~rGkhRtg~lVgclRklq~ 174 (249)
T KOG1572|consen 148 NYPILIHCKRGKHRTGCLVGCLRKLQN 174 (249)
T ss_pred CCceEEecCCCCcchhhhHHHHHHHhc
Confidence 669999999999999999998654443
No 93
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=39.84 E-value=36 Score=34.22 Aligned_cols=26 Identities=31% Similarity=0.505 Sum_probs=19.8
Q ss_pred ccCCCeeEEEEeecCCCceeEEEEEE
Q psy8773 46 FLEPTETECTISELSPFTTYSVNISL 71 (1773)
Q Consensus 46 ~~~~~~~~~t~~~L~p~t~Y~~~v~~ 71 (1773)
..+.....+++++|+|+|.|+++|+.
T Consensus 61 ~~~~~~~~~~l~~L~p~t~YCv~V~~ 86 (106)
T PF09294_consen 61 EIETKNSSVTLSDLKPGTNYCVSVQA 86 (106)
T ss_dssp EEESSSEEEEEES--TTSEEEEEEEE
T ss_pred EEeecCCEEEEeCCCCCCCEEEEEEE
Confidence 34455567899999999999999998
No 94
>KOG1089|consensus
Probab=39.46 E-value=22 Score=46.47 Aligned_cols=58 Identities=26% Similarity=0.351 Sum_probs=41.6
Q ss_pred CCCEEEEecCCCCcchhHHHHHHHH---------------Hh------------hc--------ccCCcCHH----HHHH
Q psy8773 1589 DGPITVHCSAGVGRTGVFITLSIVL---------------ER------------MQ--------YEGVIDLF----QTVR 1629 (1773)
Q Consensus 1589 ~gPIvVHCs~G~GRTGvFcAl~~ll---------------eq------------lk--------~E~~VDVF----QtVK 1629 (1773)
+.+|+|||++|--||...|+|.-++ |+ .. ...+--|| +.|.
T Consensus 344 ~~sVlvhcsdGwDrT~qV~SLaQllLDP~yRTi~GFqsLIeKeWi~~GH~F~~Rc~hl~~~~~~~ke~SPvF~qFLDcvw 423 (573)
T KOG1089|consen 344 GASVLVHCSDGWDRTCQVSSLAQLLLDPYYRTIKGFQSLIEKEWISFGHKFLDRCGHLAYNDGDSKEESPVFLQFLDCVW 423 (573)
T ss_pred CCeEEEEccCCcchhHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHcCCcHHHhcCCcccccCCCcccCcHHHHHHHHHH
Confidence 5799999999999999999987633 21 11 11111255 4678
Q ss_pred HHHhcCCCCCCChhhhc
Q psy8773 1630 ILRTQRPAMVQTEHLYT 1646 (1773)
Q Consensus 1630 ~lR~~RPgmVqT~eQY~ 1646 (1773)
.|=+|.|.+++--|.|.
T Consensus 424 Ql~~QfP~~FEFne~fL 440 (573)
T KOG1089|consen 424 QLLEQFPCAFEFNERFL 440 (573)
T ss_pred HHHhhCCcceehhHHHH
Confidence 88899999999877775
No 95
>KOG2386|consensus
Probab=39.29 E-value=71 Score=40.32 Aligned_cols=84 Identities=20% Similarity=0.259 Sum_probs=56.6
Q ss_pred EecCCCCCCCCCChHHHHHHHHHHHhhCCCCCCccCCCCCCCCCCEEEEcCCCCCCceeehhHHHHHHHHhcCCccCHHH
Q psy8773 376 QFTAWPDHGVPEHPAPFLLFLRRVRAMNPGTNSLESSGVNLPVGPLIVHCSAGVGRTGCFIVIDAMIERIKHDKTVDIYG 455 (1773)
Q Consensus 376 hYt~WPD~GVP~~~~~lL~Fi~~Vr~~~~~~~~~~~~~~~~~~gPIVVHCSAGVGRTGtFIaID~ll~~l~~e~~VdV~~ 455 (1773)
....-+-+|+-.+....-.|++.|....... ..+..=|.|||..|..|||-+|+. .|-..+..++..
T Consensus 90 ~K~~c~g~~~vp~~~~v~~fv~~v~~f~~~~--------~~~~~LI~vhcthG~NrtgyLI~~-----yL~~~~~~s~~~ 156 (393)
T KOG2386|consen 90 LKRNCPGRGVVPRTELVDKFVKLVKGFVDDT--------KLDDELIGVHCTHGLNRTGYLICA-----YLADVGGYSSSE 156 (393)
T ss_pred EEeccCCcccCCCccchHHHHHHHHHHHhcc--------cCCCCEEEEeCCCcccccceeeee-----eeeeccCccHHH
Confidence 3445566673335566677777777765532 223456999999999999998763 222223378888
Q ss_pred HHHHHHHhcccCCCCHH
Q psy8773 456 HVTCLRAQRNYMVQTED 472 (1773)
Q Consensus 456 iV~~LR~qR~~mVQT~e 472 (1773)
+++.+=..|...+.-.+
T Consensus 157 aik~f~~~r~~gi~k~d 173 (393)
T KOG2386|consen 157 AIKRFADARPPGIEKQD 173 (393)
T ss_pred HHHHHHHhCCCccCchH
Confidence 89999888888765543
No 96
>KOG1572|consensus
Probab=35.27 E-value=66 Score=37.95 Aligned_cols=19 Identities=42% Similarity=1.050 Sum_probs=18.1
Q ss_pred CCEEEEcCCCCCCceeehh
Q psy8773 419 GPLIVHCSAGVGRTGCFIV 437 (1773)
Q Consensus 419 gPIVVHCSAGVGRTGtFIa 437 (1773)
-|++|||.-|=-|||++++
T Consensus 149 ~P~Lihc~rGkhRtg~lVg 167 (249)
T KOG1572|consen 149 YPILIHCKRGKHRTGCLVG 167 (249)
T ss_pred CceEEecCCCCcchhhhHH
Confidence 5999999999999999998
No 97
>PF06602 Myotub-related: Myotubularin-like phosphatase domain; InterPro: IPR010569 This family represents a region within eukaryotic myotubularin-related proteins that is sometimes found with IPR004182 from INTERPRO. Myotubularin is a dual-specific lipid phosphatase that dephosphorylates phosphatidylinositol 3-phosphate and phosphatidylinositol (3,5)-bi-phosphate []. Mutations in gene encoding myotubularin-related proteins have been associated with disease [].; GO: 0016791 phosphatase activity, 0016311 dephosphorylation; PDB: 1M7R_B 1LW3_A 1ZVR_A 1ZSQ_A 2YF0_A.
Probab=34.50 E-value=35 Score=42.53 Aligned_cols=24 Identities=29% Similarity=0.536 Sum_probs=18.8
Q ss_pred CCCEEEEcCCCCccchhHhHHHHH
Q psy8773 929 VGPLIVHCSAGVGRTGCFIVIDAM 952 (1773)
Q Consensus 929 ~gPIVVHCSaGVGRTGtFIAId~l 952 (1773)
..+|+|||++|-.||..++++..+
T Consensus 231 ~~~Vlvh~~dGwDrt~q~~sL~ql 254 (353)
T PF06602_consen 231 GSSVLVHCSDGWDRTSQLSSLAQL 254 (353)
T ss_dssp --EEEEECTTSSSHHHHHHHHHHH
T ss_pred CceEEEEcCCCCcccHHHHHHHHH
Confidence 468999999999999888775543
No 98
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=29.09 E-value=68 Score=28.30 Aligned_cols=23 Identities=26% Similarity=0.365 Sum_probs=20.3
Q ss_pred eeEEEEeecCCCceeEEEEEEee
Q psy8773 51 ETECTISELSPFTTYSVNISLRA 73 (1773)
Q Consensus 51 ~~~~t~~~L~p~t~Y~~~v~~~~ 73 (1773)
+..+.+.+|+|+++|.+.|....
T Consensus 56 ~~~~~i~~L~~~~~Y~v~v~a~~ 78 (83)
T smart00060 56 STSYTLTGLKPGTEYEFRVRAVN 78 (83)
T ss_pred ccEEEEeCcCCCCEEEEEEEEEc
Confidence 57799999999999999997754
No 99
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.21 E-value=78 Score=33.86 Aligned_cols=29 Identities=24% Similarity=0.413 Sum_probs=16.9
Q ss_pred CCCEEEEecCCCCcchhHHHHHHHHHhhcc
Q psy8773 1589 DGPITVHCSAGVGRTGVFITLSIVLERMQY 1618 (1773)
Q Consensus 1589 ~gPIvVHCs~G~GRTGvFcAl~~lleqlk~ 1618 (1773)
.|||+.||..|. |+=++-++.-+..+|..
T Consensus 87 egPVlayCrsGt-Rs~~ly~~~~~~~gm~~ 115 (130)
T COG3453 87 EGPVLAYCRSGT-RSLNLYGLGELDGGMSR 115 (130)
T ss_pred CCCEEeeecCCc-hHHHHHHHHHHhcCCCH
Confidence 589999997763 44443333334444433
No 100
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=25.18 E-value=2e+02 Score=25.17 Aligned_cols=64 Identities=27% Similarity=0.322 Sum_probs=36.5
Q ss_pred ceEEeeCCCccCCCceEEEeecchhhhhcccCcccccccccccccccCcccceeccCCCcceEEEEEEeecCC
Q psy8773 80 SMTLSWSPPIKLNPVKYKISLDAVKEFVDSQGITQTQIVPRRTLFLEPTETECTISELSPFTTYSVNIRRRQP 152 (1773)
Q Consensus 80 ~~~~~~s~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 152 (1773)
.+.++|++|..-+...|.+.+.............. . . ......+.+.+|.+.+.|.+.|+....
T Consensus 16 ~~~v~W~~~~~~~~~~y~~~~~~~~~~~~~~~~~~--~-~------~~~~~~~~i~~L~~~~~Y~v~v~a~~~ 79 (83)
T smart00060 16 SVTLSWEPPPDDGITGYIVGYRVEYREEGSSWKEV--N-V------TPSSTSYTLTGLKPGTEYEFRVRAVNG 79 (83)
T ss_pred EEEEEECCCCCCCCCccEEEEEEEEecCCCccEEE--E-e------cCCccEEEEeCcCCCCEEEEEEEEEcc
Confidence 68999998755333566665443311111001111 0 0 011345689999999999999888653
No 101
>KOG1089|consensus
Probab=24.42 E-value=56 Score=42.88 Aligned_cols=24 Identities=29% Similarity=0.477 Sum_probs=20.1
Q ss_pred CCCEEEEcCCCCccchhHhHHHHH
Q psy8773 929 VGPLIVHCSAGVGRTGCFIVIDAM 952 (1773)
Q Consensus 929 ~gPIVVHCSaGVGRTGtFIAId~l 952 (1773)
..++|||||+|--||...+.+..+
T Consensus 344 ~~sVlvhcsdGwDrT~qV~SLaQl 367 (573)
T KOG1089|consen 344 GASVLVHCSDGWDRTCQVSSLAQL 367 (573)
T ss_pred CCeEEEEccCCcchhHHHHHHHHH
Confidence 369999999999999988876543
No 102
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=22.38 E-value=1.1e+02 Score=27.90 Aligned_cols=25 Identities=28% Similarity=0.383 Sum_probs=21.5
Q ss_pred CeeEEEEeecCCCceeEEEEEEeee
Q psy8773 50 TETECTISELSPFTTYSVNISLRAH 74 (1773)
Q Consensus 50 ~~~~~t~~~L~p~t~Y~~~v~~~~~ 74 (1773)
+...+.+.+|.|++.|.+.|.....
T Consensus 55 ~~~~~~i~~l~p~~~Y~~~v~a~~~ 79 (93)
T cd00063 55 SETSYTLTGLKPGTEYEFRVRAVNG 79 (93)
T ss_pred cccEEEEccccCCCEEEEEEEEECC
Confidence 5678999999999999999977554
No 103
>PRK08455 fliL flagellar basal body-associated protein FliL; Reviewed
Probab=20.25 E-value=1.8e+02 Score=33.19 Aligned_cols=50 Identities=24% Similarity=0.377 Sum_probs=31.9
Q ss_pred CCceeeehHHHHHHHHHHHHHHHHHHhhcc----------------------------------ccccCCCCcccceEEe
Q psy8773 1689 SPGLLWIIGPIIAALALSICLVLLFILKSS----------------------------------LESSGVNLPVGPLIVH 1734 (1773)
Q Consensus 1689 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~~~ 1734 (1773)
+-.++|||..++.+|.+.+.++..|++... +..-|.-.|++|++|.
T Consensus 16 ~~~l~~iIi~~~llll~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~L~~fvVN 95 (182)
T PRK08455 16 SKALLIIIIGVVVLLLLIVGVIAMLLMGSKEEEKENAQKPTQEVQANPPANSAQEAKEGSNIQDFLNIGPLYPLDPFTVN 95 (182)
T ss_pred CceeEEehHHHHHHHHHHHHHHHHHHhcCCCccccccccchhhhcccCCccccccccccccccccccccceEecCCEEEE
Confidence 345677777666666666666666666432 1222566788899999
Q ss_pred eccC
Q psy8773 1735 CSAG 1738 (1773)
Q Consensus 1735 ~~~~ 1738 (1773)
-..+
T Consensus 96 L~~~ 99 (182)
T PRK08455 96 LLSQ 99 (182)
T ss_pred ccCC
Confidence 8544
Done!