Query psy8774
Match_columns 427
No_of_seqs 285 out of 2751
Neff 10.4
Searched_HMMs 46136
Date Fri Aug 16 18:58:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8774.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8774hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4221|consensus 100.0 5.2E-36 1.1E-40 294.1 34.8 358 3-398 437-812 (1381)
2 KOG4221|consensus 100.0 3.6E-36 7.8E-41 295.2 32.4 382 4-387 531-1008(1381)
3 KOG3513|consensus 100.0 2.2E-34 4.7E-39 284.2 34.2 357 2-390 623-1007(1051)
4 KOG3513|consensus 100.0 2E-25 4.3E-30 221.2 34.1 306 53-395 584-911 (1051)
5 KOG0196|consensus 99.8 1.3E-17 2.7E-22 159.6 21.0 193 86-311 329-537 (996)
6 KOG0196|consensus 99.7 9.7E-16 2.1E-20 146.9 20.1 179 2-183 339-536 (996)
7 KOG4222|consensus 99.7 6.6E-16 1.4E-20 152.8 16.0 276 2-308 535-843 (1281)
8 KOG4222|consensus 99.6 1E-13 2.2E-18 137.6 16.9 312 48-388 474-834 (1281)
9 KOG4258|consensus 99.6 1.9E-13 4.1E-18 131.8 17.1 290 94-388 493-913 (1025)
10 KOG4258|consensus 99.4 6.8E-12 1.5E-16 121.3 16.3 271 4-307 498-921 (1025)
11 PF00041 fn3: Fibronectin type 99.3 1.9E-11 4E-16 89.5 8.7 85 187-301 1-85 (85)
12 PF00041 fn3: Fibronectin type 99.2 1.5E-10 3.2E-15 84.7 9.8 81 91-173 2-84 (85)
13 KOG4802|consensus 98.9 5.9E-08 1.3E-12 86.9 13.3 129 144-300 208-342 (516)
14 cd00063 FN3 Fibronectin type 3 98.7 1.6E-07 3.6E-12 69.1 10.1 88 187-306 2-91 (93)
15 KOG4802|consensus 98.6 6E-07 1.3E-11 80.6 12.3 160 5-171 157-340 (516)
16 cd00063 FN3 Fibronectin type 3 98.5 1.5E-06 3.2E-11 63.9 11.2 84 91-177 3-89 (93)
17 COG3401 Fibronectin type 3 dom 98.5 1.3E-05 2.7E-10 71.0 17.5 322 23-391 4-336 (343)
18 PF10179 DUF2369: Uncharacteri 98.5 0.00029 6.3E-09 62.7 25.7 245 44-298 11-286 (300)
19 smart00060 FN3 Fibronectin typ 98.3 6.4E-06 1.4E-10 58.7 9.4 80 187-297 2-82 (83)
20 KOG3632|consensus 98.2 3.9E-06 8.4E-11 83.2 8.3 206 5-224 589-814 (1335)
21 KOG3632|consensus 98.1 1.7E-05 3.7E-10 78.8 9.4 219 92-354 581-821 (1335)
22 COG3401 Fibronectin type 3 dom 98.0 0.00077 1.7E-08 60.0 17.2 244 7-297 83-331 (343)
23 smart00060 FN3 Fibronectin typ 98.0 0.00018 4E-09 50.9 11.2 75 92-170 4-82 (83)
24 PF10179 DUF2369: Uncharacteri 97.9 0.0033 7.1E-08 56.1 19.5 118 270-389 126-288 (300)
25 KOG4367|consensus 97.6 0.0001 2.2E-09 66.9 5.0 83 99-183 449-531 (699)
26 KOG4152|consensus 97.5 0.0005 1.1E-08 64.3 8.0 77 149-226 651-729 (830)
27 KOG4152|consensus 97.4 0.0012 2.7E-08 61.7 9.6 118 277-395 652-795 (830)
28 PF09294 Interfer-bind: Interf 97.3 0.0017 3.8E-08 49.2 8.8 90 90-181 4-105 (106)
29 PF09294 Interfer-bind: Interf 97.2 0.0018 3.9E-08 49.2 7.6 87 188-308 5-105 (106)
30 KOG4367|consensus 97.1 0.00041 8.9E-09 63.1 3.6 72 7-78 452-523 (699)
31 KOG4806|consensus 96.9 0.24 5.1E-06 44.6 18.1 244 44-297 166-435 (454)
32 KOG4228|consensus 96.7 0.0081 1.8E-07 61.9 9.1 168 3-226 34-202 (1087)
33 PF01108 Tissue_fac: Tissue fa 96.7 0.018 3.9E-07 43.7 8.9 78 88-170 21-104 (107)
34 PF01108 Tissue_fac: Tissue fa 96.6 0.025 5.3E-07 42.9 9.0 84 184-298 20-105 (107)
35 COG4733 Phage-related protein, 96.1 0.13 2.9E-06 51.7 13.1 142 124-301 639-786 (952)
36 COG4733 Phage-related protein, 95.6 0.07 1.5E-06 53.5 9.2 140 27-171 639-783 (952)
37 KOG0613|consensus 95.4 0.45 9.9E-06 50.4 14.3 343 11-389 9-421 (1205)
38 KOG0613|consensus 95.2 0.32 7E-06 51.5 12.8 261 7-302 153-423 (1205)
39 PF09067 EpoR_lig-bind: Erythr 94.9 0.37 8E-06 36.1 9.1 78 88-170 7-95 (104)
40 PF09067 EpoR_lig-bind: Erythr 94.5 0.32 6.9E-06 36.4 8.0 85 184-297 6-95 (104)
41 PLN02533 probable purple acid 92.3 0.94 2E-05 43.7 9.3 99 184-312 39-137 (427)
42 PLN02533 probable purple acid 90.8 7.5 0.00016 37.6 13.8 82 88-182 40-134 (427)
43 PF09240 IL6Ra-bind: Interleuk 90.3 5.9 0.00013 29.3 11.1 77 91-170 1-86 (99)
44 KOG4806|consensus 90.2 15 0.00032 33.7 14.0 111 278-390 290-439 (454)
45 TIGR00868 hCaCC calcium-activa 89.9 29 0.00063 36.6 22.1 41 185-226 755-797 (863)
46 PF07495 Y_Y_Y: Y_Y_Y domain; 89.2 1.6 3.5E-05 29.4 5.8 44 127-171 11-54 (66)
47 KOG1225|consensus 88.5 2.1 4.6E-05 41.8 8.0 153 92-289 369-524 (525)
48 KOG4228|consensus 87.3 1.5 3.2E-05 46.1 6.5 80 94-181 30-109 (1087)
49 KOG1225|consensus 86.9 1.2 2.7E-05 43.4 5.4 145 4-162 376-524 (525)
50 PF09240 IL6Ra-bind: Interleuk 85.4 9.9 0.00021 28.1 8.6 39 188-227 1-39 (99)
51 PF07495 Y_Y_Y: Y_Y_Y domain; 84.5 9.2 0.0002 25.5 7.5 37 37-75 19-55 (66)
52 cd02848 Chitinase_N_term Chiti 79.2 18 0.00039 27.0 7.6 69 3-76 29-97 (106)
53 PHA02579 7 baseplate wedge sub 75.4 14 0.00031 37.5 8.0 82 187-294 6-87 (1030)
54 KOG1948|consensus 74.6 1.2E+02 0.0025 31.9 14.8 114 45-165 943-1063(1165)
55 PF14292 SusE: SusE outer memb 69.7 45 0.00098 25.7 8.4 30 6-35 43-73 (122)
56 PF08329 ChitinaseA_N: Chitina 64.5 24 0.00052 27.7 5.7 66 5-77 35-101 (133)
57 PF13754 Big_3_4: Bacterial Ig 61.7 31 0.00068 22.1 5.1 34 146-180 15-48 (54)
58 TIGR00864 PCC polycystin catio 61.3 3.8E+02 0.0082 32.7 25.9 26 283-308 1840-1865(2740)
59 KOG3515|consensus 60.5 1.2E+02 0.0025 31.6 11.1 69 276-346 658-728 (741)
60 TIGR00868 hCaCC calcium-activa 59.2 32 0.00069 36.4 7.1 77 93-170 760-854 (863)
61 PF09423 PhoD: PhoD-like phosp 58.4 14 0.0003 36.2 4.4 45 273-320 65-109 (453)
62 KOG1948|consensus 58.1 2.5E+02 0.0055 29.7 17.9 22 144-165 945-966 (1165)
63 PF13750 Big_3_3: Bacterial Ig 57.6 1E+02 0.0022 25.1 10.2 32 276-308 116-147 (158)
64 TIGR00864 PCC polycystin catio 56.7 4.5E+02 0.0098 32.2 22.7 33 274-307 1662-1694(2740)
65 PF14292 SusE: SusE outer memb 55.4 94 0.002 23.9 8.6 36 191-226 36-72 (122)
66 PF10342 GPI-anchored: Ser-Thr 53.6 80 0.0017 22.6 7.2 56 8-66 13-77 (93)
67 PF02010 REJ: REJ domain; Int 51.2 10 0.00022 36.8 2.2 235 55-328 47-317 (440)
68 PHA02579 7 baseplate wedge sub 49.1 68 0.0015 33.0 7.2 78 92-177 8-95 (1030)
69 PF09423 PhoD: PhoD-like phosp 49.1 1.2E+02 0.0027 29.6 9.3 21 47-67 63-83 (453)
70 COG3979 Uncharacterized protei 48.3 23 0.00049 29.7 3.4 85 186-308 5-90 (181)
71 KOG3515|consensus 46.0 1.5E+02 0.0032 30.8 9.2 75 148-226 657-731 (741)
72 PF08329 ChitinaseA_N: Chitina 45.8 1.3E+02 0.0029 23.7 7.0 72 100-181 35-107 (133)
73 cd02848 Chitinase_N_term Chiti 45.7 1.3E+02 0.0028 22.6 7.6 70 100-179 31-102 (106)
74 PF13754 Big_3_4: Bacterial Ig 43.0 88 0.0019 20.0 5.1 28 273-301 15-42 (54)
75 PF07353 Uroplakin_II: Uroplak 41.2 40 0.00088 27.1 3.6 40 269-309 99-138 (184)
76 PF11344 DUF3146: Protein of u 40.7 20 0.00043 24.7 1.6 15 54-68 66-80 (80)
77 PF07353 Uroplakin_II: Uroplak 37.2 2.1E+02 0.0046 23.2 6.9 24 47-70 101-124 (184)
78 PF10342 GPI-anchored: Ser-Thr 35.6 1.6E+02 0.0035 20.9 7.6 58 102-164 12-78 (93)
79 KOG1378|consensus 31.9 3.1E+02 0.0068 26.7 8.5 37 269-310 106-142 (452)
80 PF13750 Big_3_3: Bacterial Ig 27.9 3.3E+02 0.0072 22.1 12.3 31 149-180 116-146 (158)
81 cd05762 Ig8_MLCK Eighth immuno 23.5 2.9E+02 0.0064 20.0 6.2 30 144-173 55-84 (98)
82 TIGR03000 plancto_dom_1 Planct 22.8 1.3E+02 0.0029 20.9 3.3 29 44-72 25-54 (75)
83 KOG1378|consensus 21.0 7.9E+02 0.017 24.0 11.6 85 91-183 44-142 (452)
84 PF04775 Bile_Hydr_Trans: Acyl 20.6 1.9E+02 0.004 22.5 4.2 26 47-72 4-29 (126)
No 1
>KOG4221|consensus
Probab=100.00 E-value=5.2e-36 Score=294.06 Aligned_cols=358 Identities=27% Similarity=0.381 Sum_probs=282.7
Q ss_pred CCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccce-E
Q psy8774 3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVR-Y 80 (427)
Q Consensus 3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~-~ 80 (427)
.-+..+.+.++|.+|...++++..|.+.|........+... .......++.+|.|.+.|.|+|+|.|..|.+.++.. .
T Consensus 437 ~~~~srfi~~tw~~p~~~~g~i~~~~v~~~~~~~~rer~~~tss~g~~~tv~nl~p~t~Y~~rv~A~n~~g~g~sS~pLk 516 (1381)
T KOG4221|consen 437 NLVSSRFIQLTWRPPAQISGNISTYTVFYKVEGDVRERLQNTSSPGIQVTVQNLSPLTMYFFRVRAKNEAGSGESSAPLK 516 (1381)
T ss_pred ccccceeEEEeecCccccCCCcceEEEEEecCCchhhhheeccCCceEEEeeecccceeEEEEEeccCcccCCccCCceE
Confidence 34567889999998888889999999999876654433333 222288999999999999999999999999986643 4
Q ss_pred EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEE
Q psy8774 81 YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSA 160 (427)
Q Consensus 81 ~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~ 160 (427)
+.+..+ +++. ++....+..++.+.|++| .-.+++|.+|.+.|... +...+.....+..+++|++|.+.|.|.|
T Consensus 517 V~t~pE---gp~~-~~a~ats~~ti~v~WepP--~~~n~~I~~yk~~ys~~-~~~~~~~~~~n~~e~ti~gL~k~TeY~~ 589 (1381)
T KOG4221|consen 517 VTTQPE---GPVQ-LQAYATSPTTILVTWEPP--PFGNGPITGYKLFYSED-DTGKELRVENNATEYTINGLEKYTEYSI 589 (1381)
T ss_pred EecCCC---CCcc-ccccccCcceEEEEecCC--CCCCCCceEEEEEEEcC-CCCceEEEecCccEEEeecCCCccceEE
Confidence 444333 3344 888899999999999999 46788999999999987 4555666677899999999999999999
Q ss_pred EEEEeeCCCCCCCCCCeEEEcccccCC-CCCceEEEeeeCcEEEEEeeeCCCC--CCceeEEEEEEEecccccccccccc
Q psy8774 161 EVQAITKAGPGPWSPKLSLMTARDMVR-APLGVKALATSDQSVEVWWKPVPAG--RGKILGYQIFYTMTAVEDLDEWSQK 237 (427)
Q Consensus 161 ~V~a~~~~g~~~~s~~~~~~t~~~~p~-~p~~l~~~~~~~~si~v~W~~p~~~--~g~i~~Y~I~~~~~~~~~~~~~~~~ 237 (427)
+|.|+|.+|.|..|..+.+.|..+.|. ||.|+++...++++|.|+|.+|... +|.+.+|+|+|+.........+
T Consensus 590 ~vvA~N~~G~g~sS~~i~V~Tlsd~PsaPP~Nl~lev~sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~--- 666 (1381)
T KOG4221|consen 590 RVVAYNSAGSGVSSADITVRTLSDVPSAPPQNLSLEVVSSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNE--- 666 (1381)
T ss_pred EEEEecCCCCCCCCCceEEEeccCCCCCCCcceEEEecCCCeEEEEccCCCcccccceEEEEEEEecccCcccccce---
Confidence 999999999999999999999877775 5556999999999999999999863 6899999999997633222211
Q ss_pred cccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCC------
Q psy8774 238 SIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPE------ 311 (427)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~------ 311 (427)
....++...+.+.+|+|++.|.|+|.|.+..|.|++|++..+.|.-.
T Consensus 667 ---------------------------t~v~~n~~~~l~~~Lep~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~~d~~e~v 719 (1381)
T KOG4221|consen 667 ---------------------------TVVKGNTTQYLFNGLEPNTQYRVRISAMTVNGTGPASEWVSAETPESDLDERV 719 (1381)
T ss_pred ---------------------------eecccchhhhHhhcCCCCceEEEEEEEeccCCCCCcccceeccCccccccccC
Confidence 22334778899999999999999999999999999999999998522
Q ss_pred -CCCcceEEeecCCCeEEEEecCCCcCCCc--eEEEEEehe---e-ecceeeeeeEEEEeecccccccceEEEEEeeccc
Q psy8774 312 -DVPLSLRAHDVSTHSMTLSWSPPIKLNPV--KYKEVSEKI---Q-ERRLQKYGQYRYFETRDESYIGKRVERMEVRGRK 384 (427)
Q Consensus 312 -~~P~~l~~~~~~~~~v~l~W~~P~~~~g~--~Y~i~~~~~---~-~~~l~~~t~y~~~~~~~~~~~~~~~~~v~a~~~~ 384 (427)
.+|..|.+. ....++.++|.||..++.. +|+|.|+.. . ....+-..+-+++....|.+...|.++++|.|..
T Consensus 720 p~~ps~l~~~-~g~~si~vsW~Pp~~~~~~vrgY~ig~r~g~~~p~~~tIrl~~~~s~y~l~~Le~~~~YvVkL~AfNn~ 798 (1381)
T KOG4221|consen 720 PGKPSELHVH-PGSNSIVVSWTPPPHPNIVVRGYKIGYRPGSGIPDTGTIRLDEKVSYYNLEQLEPNRDYVVKLRAFNNH 798 (1381)
T ss_pred CCCCceeeec-cCceeEEEEeCCCCChhhhhcceEEeeecccCCCCCccEEecceeeEEEEEecccCceEEEEEEEeccC
Confidence 233333333 5788999999999988653 999999421 1 1112222344556777799999999999999999
Q ss_pred CCCCcchhhhHHHH
Q psy8774 385 GRGRPKKRWMDCVN 398 (427)
Q Consensus 385 g~g~p~~~~~~~~~ 398 (427)
|.|.|..+...+.+
T Consensus 799 gdG~p~y~~~~tR~ 812 (1381)
T KOG4221|consen 799 GDGNPIYESVKTRS 812 (1381)
T ss_pred CCCcceeeeeeecc
Confidence 99999755555543
No 2
>KOG4221|consensus
Probab=100.00 E-value=3.6e-36 Score=295.18 Aligned_cols=382 Identities=23% Similarity=0.322 Sum_probs=285.1
Q ss_pred CccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCccc-ceEEe
Q psy8774 4 EEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQET-VRYYT 82 (427)
Q Consensus 4 ~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~-~~~~~ 82 (427)
..+..++.+.|++|..++++|++|+|.|...+...|... ..+..+++|.+|.+.|+|.|+|+|+|..|.|..+ .+.+.
T Consensus 531 ats~~ti~v~WepP~~~n~~I~~yk~~ys~~~~~~~~~~-~~n~~e~ti~gL~k~TeY~~~vvA~N~~G~g~sS~~i~V~ 609 (1381)
T KOG4221|consen 531 ATSPTTILVTWEPPPFGNGPITGYKLFYSEDDTGKELRV-ENNATEYTINGLEKYTEYSIRVVAYNSAGSGVSSADITVR 609 (1381)
T ss_pred ccCcceEEEEecCCCCCCCCceEEEEEEEcCCCCceEEE-ecCccEEEeecCCCccceEEEEEEecCCCCCCCCCceEEE
Confidence 356788999999999899999999999998755555544 6788999999999999999999999999999855 67899
Q ss_pred CCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce-E-EEeeeeeEEEEccCCCCcEEEE
Q psy8774 83 TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV-I-HRNTTQTKAVFSNLEEGIEYSA 160 (427)
Q Consensus 83 t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~-~-~~~~~~~~~~i~~L~p~t~Y~~ 160 (427)
|..+.|..||.|+++...++++|.|+|.+|.....+|.+.+|.|+|+........ + ....+.+++.+.+|+|++.|.|
T Consensus 610 Tlsd~PsaPP~Nl~lev~sStsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~n~~~~l~~~Lep~T~Y~v 689 (1381)
T KOG4221|consen 610 TLSDVPSAPPQNLSLEVVSSTSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKGNTTQYLFNGLEPNTQYRV 689 (1381)
T ss_pred eccCCCCCCCcceEEEecCCCeEEEEccCCCcccccceEEEEEEEecccCcccccceeecccchhhhHhhcCCCCceEEE
Confidence 9999999999999999999999999999999889999999999999966433333 2 2234688899999999999999
Q ss_pred EEEEeeCCCCCCCCCCeEEEcccc-----cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccccc-cccc
Q psy8774 161 EVQAITKAGPGPWSPKLSLMTARD-----MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVED-LDEW 234 (427)
Q Consensus 161 ~V~a~~~~g~~~~s~~~~~~t~~~-----~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~-~~~~ 234 (427)
+|.|++.+|.|++|+.+.+.|... .|.+|..|.+. ...++|.|+|.||...+-.+.+|+|.|+...+.. ....
T Consensus 690 rIsa~t~nGtGpaS~w~~aeT~~~d~~e~vp~~ps~l~~~-~g~~si~vsW~Pp~~~~~~vrgY~ig~r~g~~~p~~~tI 768 (1381)
T KOG4221|consen 690 RISAMTVNGTGPASEWVSAETPESDLDERVPGKPSELHVH-PGSNSIVVSWTPPPHPNIVVRGYKIGYRPGSGIPDTGTI 768 (1381)
T ss_pred EEEEeccCCCCCcccceeccCccccccccCCCCCceeeec-cCceeEEEEeCCCCChhhhhcceEEeeecccCCCCCccE
Confidence 999999999999999999999432 23455555553 3678999999999977778999999996432211 0000
Q ss_pred ccc----cccccc------------------------------------------------------cccceeEEeeec-
Q psy8774 235 SQK----SIPLTE------------------------------------------------------SSNIARIFYTMT- 255 (427)
Q Consensus 235 ~~~----~~~~~~------------------------------------------------------~~~~~~~~~~~~- 255 (427)
..+ .+.+.. ++..++..|...
T Consensus 769 rl~~~~s~y~l~~Le~~~~YvVkL~AfNn~gdG~p~y~~~~tR~~~~~~~~v~tp~~ppvgv~A~~~S~tsI~v~w~~~~ 848 (1381)
T KOG4221|consen 769 RLDEKVSYYNLEQLEPNRDYVVKLRAFNNHGDGNPIYESVKTRSATDPTSPVDTPMLPPVGVRANALSSTSIRVTWADNK 848 (1381)
T ss_pred EecceeeEEEEEecccCceEEEEEEEeccCCCCcceeeeeeeccCCCcCCcCCCCCCCcccccccccccceEEEEEecCC
Confidence 000 000000 000111111110
Q ss_pred -cccc----ccccc----------ccccCCCCceeccCCCCCCeEEEEEEEEeccC-CCCCccceEEeec---CCCCCcc
Q psy8774 256 -AVED----LDEWS----------QKSVPLTESAELTSLEKFTEYAVAVAARTVNG-LGRLSGKVTVKVK---PEDVPLS 316 (427)
Q Consensus 256 -~~~~----~~~~~----------~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G-~g~~s~~~~~~t~---~~~~P~~ 316 (427)
...+ ...|. ........++.+.+|+|++.|.|.|.+...++ .|.+|+.+..+|. |..||.+
T Consensus 849 ~~t~~~~~yTVr~~~~gi~~~~~~~~~~~t~ls~~v~glkpnt~yEfav~~~~~~~r~stwsmsv~~~tle~~P~sPP~d 928 (1381)
T KOG4221|consen 849 DQTTDNRIYTVRWSLTGIRNGTLYRYDNSTDLSYLVGGLKPNTPYEFAVMVVKRNRRESTWSMSVENRTLELVPSSPPRD 928 (1381)
T ss_pred CccccceEEEEEEeecccccceeEEEecccccceeccCcCcCChhhhhhhhhhccCcCCcccceeeeeecccCCCCCChh
Confidence 0000 11222 12234455788999999999999999987433 8889988888874 5678999
Q ss_pred eEEeecC-CCeEEEEecCCCcCCCc--eEEEEEeheeecceeeeeeEEE------EeecccccccceEEEEEeecccCCC
Q psy8774 317 LRAHDVS-THSMTLSWSPPIKLNPV--KYKEVSEKIQERRLQKYGQYRY------FETRDESYIGKRVERMEVRGRKGRG 387 (427)
Q Consensus 317 l~~~~~~-~~~v~l~W~~P~~~~g~--~Y~i~~~~~~~~~l~~~t~y~~------~~~~~~~~~~~~~~~v~a~~~~g~g 387 (427)
+++.... ++++.+.|.||.++||. .|.|.|..-........+...+ .....+++...|.|+|+|++.+|.|
T Consensus 929 ~tv~p~e~P~~v~v~WqPp~e~nG~I~~Yii~Ys~~~n~~~~dWt~~t~~g~~L~~~v~~l~p~t~yffkiQAr~~kG~g 1008 (1381)
T KOG4221|consen 929 LTVQPDEKPTTVIVHWQPPTEPNGEITEYIIYYSTDGNTPEHDWTIETTAGAELSHQVPNLDPDTGYFFKIQARNEKGPG 1008 (1381)
T ss_pred ceecccCCCCccccccCCCcCCCCceeeEEEEEecCCCCchhhceeeecccchhhhccCCCCCCCceEEEEEeeccCCCC
Confidence 9988654 89999999999999993 8999876333222222222211 2456678899999999999999999
No 3
>KOG3513|consensus
Probab=100.00 E-value=2.2e-34 Score=284.25 Aligned_cols=357 Identities=25% Similarity=0.275 Sum_probs=281.2
Q ss_pred CCCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe--ecCc---ceEEEcCCCCCceEEEEEEEEeccCcCcc
Q psy8774 2 LKEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV--NSKN---MSFLITNLERGVEYEFRIAGQNHIGYGQE 76 (427)
Q Consensus 2 ~~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~--~~~~---~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~ 76 (427)
+.+++++++.|+|.+..+.+++|..|.|+++......|..+. +... .+.++.+|.|...|+|||.|.|..|.|.+
T Consensus 623 ~~~i~~t~~~lsW~~g~dn~SpI~~Y~iq~rt~~~~~W~~v~~vp~~~~~~~sa~vv~L~Pwv~YeFRV~AvN~iG~geP 702 (1051)
T KOG3513|consen 623 VDDISDTTARLSWSPGSDNNSPIEKYTIQFRTPFPGKWKAVTTVPGNITGDESATVVNLSPWVEYEFRVVAVNSIGIGEP 702 (1051)
T ss_pred EeeeccceEEEEeecCCCCCCCceEEeEEecCCCCCcceEeeECCCcccCccceeEEccCCCcceEEEEEEEcccccCCC
Confidence 457889999999999999999999999999988777787765 2222 35778899999999999999999999986
Q ss_pred c--ceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeee---eeEEEEcc
Q psy8774 77 T--VRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTT---QTKAVFSN 151 (427)
Q Consensus 77 ~--~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~---~~~~~i~~ 151 (427)
+ +..+.|.+++|...|.++.......+.+.|+|+|.+.+..||+..+|.|.|+..+....|....+. ...+.+.+
T Consensus 703 S~pS~~~rT~ea~P~~~P~nv~g~g~~~~eLvItW~Pl~~~~qNG~gfgY~Vswr~~g~~~~W~~~~v~~~d~~~~V~~~ 782 (1051)
T KOG3513|consen 703 SPPSEKVRTPEAAPSVNPSNVKGGGGSPTELVITWEPLPEEEQNGPGFGYRVSWRPQGADKEWKEVIVSNQDQPRYVVSN 782 (1051)
T ss_pred CCCccceecCCCCCccCCccccccCCCCceEEEEeccCCHHHccCCCceEEEEEEeCCCCcccceeEecccCCceEEEcC
Confidence 5 567899999999999999999999999999999999888999999999999999655466555433 36666665
Q ss_pred --CCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccc-cCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEeccc
Q psy8774 152 --LEEGIEYSAEVQAITKAGPGPWSPKLSLMTARD-MVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAV 228 (427)
Q Consensus 152 --L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~-~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~ 228 (427)
..|++.|.+.|.|+|..|.|+.|..+.+.+.++ |+.+|+.+.+...+.+.+.|+|++|...+|.+.+|+|+|+..+.
T Consensus 783 ~st~~~tpyevKVqa~N~~GeGp~s~~~v~~S~Ed~P~~ap~~~~~~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~ 862 (1051)
T KOG3513|consen 783 ESTEPFTPYEVKVQAINDQGEGPESQVTVGYSGEDEPPVAPTKLSAKPLSSSEVNLSWKPPLWDNGKLTGYEVKYWKINE 862 (1051)
T ss_pred CCCCCcceeEEEEEEecCCCCCCCCceEEEEcCCCCCCCCCccceeecccCceEEEEecCcCccCCccceeEEEEEEcCC
Confidence 567999999999999999999999999888554 56899999999999999999999999889999999999999854
Q ss_pred ccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774 229 EDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV 308 (427)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t 308 (427)
...... .....++.++..|+||++.+.|.|.|+|+|.+|.|+.|......|
T Consensus 863 ~~~~~~-----------------------------~~~i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~tt 913 (1051)
T KOG3513|consen 863 KEGSLS-----------------------------RVQIAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENVTT 913 (1051)
T ss_pred Cccccc-----------------------------ceeecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceeccc
Confidence 431111 233447888999999999999999999999999999998888876
Q ss_pred cCC--C-----CCcceEEeecCCCeEEEEecCCC----cCCCceEEEEEeheeec--ceeee--eeEEEEeecccccccc
Q psy8774 309 KPE--D-----VPLSLRAHDVSTHSMTLSWSPPI----KLNPVKYKEVSEKIQER--RLQKY--GQYRYFETRDESYIGK 373 (427)
Q Consensus 309 ~~~--~-----~P~~l~~~~~~~~~v~l~W~~P~----~~~g~~Y~i~~~~~~~~--~l~~~--t~y~~~~~~~~~~~~~ 373 (427)
.+. . +|. -.+.......+.|.|..-. +..+.+|.|.+..-... ..... ..-.|-...++ ..+
T Consensus 914 ~k~pPs~~~~~p~g-~~~~~~~~~~~~l~w~~v~~~~nes~v~gYkV~~~~~~~~~~~~~~t~~~~~~~~~p~~~--~~~ 990 (1051)
T KOG3513|consen 914 KKAPPSQVDIAPPG-NFIWKFSASILLLLWLLVSAFENESEVGGYKVLYREDLQNDIEIILTMKLDAEFPEPSDL--DGK 990 (1051)
T ss_pred cCCCCcccccCCCc-ceEEeeeeeEEEEEEeeEEEEeecccCcceEEEEeecccCCceeEecccccccccCcccc--CCc
Confidence 422 1 333 3344477888999997432 23456898876521111 11110 00011122222 277
Q ss_pred eEEEEEeecccCCCCcc
Q psy8774 374 RVERMEVRGRKGRGRPK 390 (427)
Q Consensus 374 ~~~~v~a~~~~g~g~p~ 390 (427)
|.++|++.+..|.|...
T Consensus 991 y~i~v~~~~~ggdg~~s 1007 (1051)
T KOG3513|consen 991 YDIKVRGYSPGGDGTIS 1007 (1051)
T ss_pred ceeEeccccCCCCCCcC
Confidence 89999999999999654
No 4
>KOG3513|consensus
Probab=99.95 E-value=2e-25 Score=221.16 Aligned_cols=306 Identities=23% Similarity=0.281 Sum_probs=231.5
Q ss_pred cCCCCCceEEEEEEEEeccCcCcccceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEcc
Q psy8774 53 TNLERGVEYEFRIAGQNHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKI 132 (427)
Q Consensus 53 ~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~ 132 (427)
..|...-.|...+.+.-.. .+..+...+.. |++||..+.+...+.+++.|+|.+.+ +.+++|..|.|+.+...
T Consensus 584 v~l~~~G~Y~C~aqT~~Ds-~s~~A~l~V~g----pPgpP~~v~~~~i~~t~~~lsW~~g~--dn~SpI~~Y~iq~rt~~ 656 (1051)
T KOG3513|consen 584 VSLEDSGKYTCVAQTALDS-ASARADLLVRG----PPGPPPDVHVDDISDTTARLSWSPGS--DNNSPIEKYTIQFRTPF 656 (1051)
T ss_pred eccccCceEEEEEEEeecc-hhcccceEEec----CCCCCCceeEeeeccceEEEEeecCC--CCCCCceEEeEEecCCC
Confidence 3578888999888874322 12233344544 55667799999999999999999994 66688999999998772
Q ss_pred CCCceEEEe---eee---eEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeE-EEcccccC-CCCCceEEEeeeCcEEEE
Q psy8774 133 DANNVIHRN---TTQ---TKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS-LMTARDMV-RAPLGVKALATSDQSVEV 204 (427)
Q Consensus 133 ~~~~~~~~~---~~~---~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~-~~t~~~~p-~~p~~l~~~~~~~~si~v 204 (427)
...|.... ... .+..+.+|.|+..|+|||.|.|..|.|.+|.+.. .+|.++.| ..|.++.......+.+.|
T Consensus 657 -~~~W~~v~~vp~~~~~~~sa~vv~L~Pwv~YeFRV~AvN~iG~gePS~pS~~~rT~ea~P~~~P~nv~g~g~~~~eLvI 735 (1051)
T KOG3513|consen 657 -PGKWKAVTTVPGNITGDESATVVNLSPWVEYEFRVVAVNSIGIGEPSPPSEKVRTPEAAPSVNPSNVKGGGGSPTELVI 735 (1051)
T ss_pred -CCcceEeeECCCcccCccceeEEccCCCcceEEEEEEEcccccCCCCCCccceecCCCCCccCCccccccCCCCceEEE
Confidence 33343332 111 3577899999999999999999999998776654 67766666 789999998888999999
Q ss_pred EeeeCCC--CCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceecc--CCC
Q psy8774 205 WWKPVPA--GRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELT--SLE 280 (427)
Q Consensus 205 ~W~~p~~--~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~L~ 280 (427)
+|++.+. .||.-.+|+|.|+..+.. ..|... .........+.+. ...
T Consensus 736 tW~Pl~~~~qNG~gfgY~Vswr~~g~~--~~W~~~---------------------------~v~~~d~~~~V~~~~st~ 786 (1051)
T KOG3513|consen 736 TWEPLPEEEQNGPGFGYRVSWRPQGAD--KEWKEV---------------------------IVSNQDQPRYVVSNESTE 786 (1051)
T ss_pred EeccCCHHHccCCCceEEEEEEeCCCC--ccccee---------------------------EecccCCceEEEcCCCCC
Confidence 9999875 478999999999998432 145211 1111223444444 456
Q ss_pred CCCeEEEEEEEEeccCCCCCccceEEeec---CCCCCcceEEeecCCCeEEEEecCCCcCCCc--eEEEEEeheeecc--
Q psy8774 281 KFTEYAVAVAARTVNGLGRLSGKVTVKVK---PEDVPLSLRAHDVSTHSMTLSWSPPIKLNPV--KYKEVSEKIQERR-- 353 (427)
Q Consensus 281 p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~---~~~~P~~l~~~~~~~~~v~l~W~~P~~~~g~--~Y~i~~~~~~~~~-- 353 (427)
|++.|.+.|+|+|..|+|+.|..+.+-+. |..+|..+.+...+.+.+.|+|++|...||. +|.|.|.......
T Consensus 787 ~~tpyevKVqa~N~~GeGp~s~~~v~~S~Ed~P~~ap~~~~~~~~s~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~~~ 866 (1051)
T KOG3513|consen 787 PFTPYEVKVQAINDQGEGPESQVTVGYSGEDEPPVAPTKLSAKPLSSSEVNLSWKPPLWDNGKLTGYEVKYWKINEKEGS 866 (1051)
T ss_pred CcceeEEEEEEecCCCCCCCCceEEEEcCCCCCCCCCccceeecccCceEEEEecCcCccCCccceeEEEEEEcCCCccc
Confidence 79999999999999999999987777653 6667888889999999999999999999995 9999987555442
Q ss_pred ---eeeeeeEEEEeecccccccceEEEEEeecccCCCCcchhhhH
Q psy8774 354 ---LQKYGQYRYFETRDESYIGKRVERMEVRGRKGRGRPKKRWMD 395 (427)
Q Consensus 354 ---l~~~t~y~~~~~~~~~~~~~~~~~v~a~~~~g~g~p~~~~~~ 395 (427)
.+-.+.-.+.....|++...|.|.|+|.|.+|.|++..+...
T Consensus 867 ~~~~~i~~~~~~~~ltgL~~~T~Y~~~vrA~nsaG~Gp~s~~~~~ 911 (1051)
T KOG3513|consen 867 LSRVQIAGNRTSWRLTGLEPNTKYRFYVRAYTSAGGGPASSEENV 911 (1051)
T ss_pred ccceeecCCcceEeeeCCCCCceEEEEEEEecCCCCCCCccceec
Confidence 111234466688899999999999999999998887654433
No 5
>KOG0196|consensus
Probab=99.79 E-value=1.3e-17 Score=159.62 Aligned_cols=193 Identities=23% Similarity=0.323 Sum_probs=150.6
Q ss_pred CCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEE-------E-----eeeeeEEEEccCC
Q psy8774 86 GPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIH-------R-----NTTQTKAVFSNLE 153 (427)
Q Consensus 86 ~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~-------~-----~~~~~~~~i~~L~ 153 (427)
..||.+|.++... ++.+++.|.|.+|.......++ .|.|.++.-........ . .-+.++..+.+|.
T Consensus 329 T~PPSaP~nlis~-vn~Ts~~L~W~~P~d~GGR~Di-~y~v~Ck~c~~~~~~C~~Cg~~V~f~P~q~gLt~~~V~v~~L~ 406 (996)
T KOG0196|consen 329 TRPPSAPRNLISN-VNGTSLILEWSPPADTGGREDI-TYNVICKKCGGGRGACEPCGDNVRFTPRQRGLTETSVTVSDLL 406 (996)
T ss_pred CCCCCccceeeee-cccceEEEEecCCcccCCCcce-EEEEEeeccCCCCCccccCCCCceECCCCCCcccceEEEeccc
Confidence 3466788888755 8999999999999754444445 68888765532221111 0 1337889999999
Q ss_pred CCcEEEEEEEEeeCCCC-C---CCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccc
Q psy8774 154 EGIEYSAEVQAITKAGP-G---PWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVE 229 (427)
Q Consensus 154 p~t~Y~~~V~a~~~~g~-~---~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~ 229 (427)
|.+.|.|.|.|+|+... + .....+.++|....|++..+++......+++.|+|..|..++|.+..|+|.|.+.+..
T Consensus 407 ah~~YTFeV~AvNgVS~lsp~~~~~a~vnItt~qa~ps~V~~~r~~~~~~~sitlsW~~p~~png~ildYEvky~ek~~~ 486 (996)
T KOG0196|consen 407 AHTNYTFEVEAVNGVSDLSPFPRQFASVNITTNQAAPSPVSVLRQVSRTSDSITLSWSEPDQPNGVILDYEVKYYEKDED 486 (996)
T ss_pred cccccEEEEEEeecccccCCCCCcceeEEeeccccCCCccceEEEeeeccCceEEecCCCCCCCCcceeEEEEEeecccc
Confidence 99999999999986332 2 2345677888777888889999999999999999999999999999999999987321
Q ss_pred cccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774 230 DLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK 309 (427)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~ 309 (427)
+.. ........+..+|.+|+|++.|.|+|+|.+..|.|.+|....++|.
T Consensus 487 e~~-------------------------------~~~~~t~~~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~ 535 (996)
T KOG0196|consen 487 ERS-------------------------------YSTLKTKTTTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTL 535 (996)
T ss_pred ccc-------------------------------eeEEecccceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeec
Confidence 111 2234456778999999999999999999999999999999999997
Q ss_pred CC
Q psy8774 310 PE 311 (427)
Q Consensus 310 ~~ 311 (427)
++
T Consensus 536 ~~ 537 (996)
T KOG0196|consen 536 PS 537 (996)
T ss_pred Cc
Confidence 65
No 6
>KOG0196|consensus
Probab=99.71 E-value=9.7e-16 Score=146.89 Aligned_cols=179 Identities=25% Similarity=0.348 Sum_probs=142.2
Q ss_pred CCCccceEEEEEeeCCCCCCC-cceEeEEEEEEecCccce-------eEe-----ecCcceEEEcCCCCCceEEEEEEEE
Q psy8774 2 LKEEPEVTIELVWSQPTQTYG-EILGYRVKYGVREHTLKE-------NLV-----NSKNMSFLITNLERGVEYEFRIAGQ 68 (427)
Q Consensus 2 ~~~~~~~sv~l~W~~p~~~~~-~i~~Y~v~~~~~~~~~~~-------~~~-----~~~~~~~~~~~L~p~t~Y~~~V~a~ 68 (427)
+.++..+++.|+|.+|.+.+| ....|.|.++......-. +.. ...+++..+.+|.|.+.|+|.|.|+
T Consensus 339 is~vn~Ts~~L~W~~P~d~GGR~Di~y~v~Ck~c~~~~~~C~~Cg~~V~f~P~q~gLt~~~V~v~~L~ah~~YTFeV~Av 418 (996)
T KOG0196|consen 339 ISNVNGTSLILEWSPPADTGGREDITYNVICKKCGGGRGACEPCGDNVRFTPRQRGLTETSVTVSDLLAHTNYTFEVEAV 418 (996)
T ss_pred eeecccceEEEEecCCcccCCCcceEEEEEeeccCCCCCccccCCCCceECCCCCCcccceEEEeccccccccEEEEEEe
Confidence 567889999999999997666 446899999876533211 111 4567889999999999999999999
Q ss_pred eccC-cCc----ccceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce-EEEee
Q psy8774 69 NHIG-YGQ----ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV-IHRNT 142 (427)
Q Consensus 69 ~~~g-~~~----~~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~-~~~~~ 142 (427)
|+.. .++ ...+.+.|...+|+. ...++....+.++++|+|..| +..+|.+..|+|.|.+.+..... .....
T Consensus 419 NgVS~lsp~~~~~a~vnItt~qa~ps~-V~~~r~~~~~~~sitlsW~~p--~~png~ildYEvky~ek~~~e~~~~~~~t 495 (996)
T KOG0196|consen 419 NGVSDLSPFPRQFASVNITTNQAAPSP-VSVLRQVSRTSDSITLSWSEP--DQPNGVILDYEVKYYEKDEDERSYSTLKT 495 (996)
T ss_pred ecccccCCCCCcceeEEeeccccCCCc-cceEEEeeeccCceEEecCCC--CCCCCcceeEEEEEeeccccccceeEEec
Confidence 9764 222 235667777777754 558899999999999999999 57788899999999987533333 33445
Q ss_pred eeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEccc
Q psy8774 143 TQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTAR 183 (427)
Q Consensus 143 ~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~ 183 (427)
..+..+|.+|+|++.|.|+|+|...+|.|++|....+.|..
T Consensus 496 ~~~~~ti~gL~p~t~YvfqVRarT~aG~G~~S~~~~fqT~~ 536 (996)
T KOG0196|consen 496 KTTTATITGLKPGTVYVFQVRARTAAGYGPYSGKHEFQTLP 536 (996)
T ss_pred ccceEEeeccCCCcEEEEEEEEecccCCCCCCCceeeeecC
Confidence 57899999999999999999999999999999999999843
No 7
>KOG4222|consensus
Probab=99.68 E-value=6.6e-16 Score=152.84 Aligned_cols=276 Identities=19% Similarity=0.241 Sum_probs=197.3
Q ss_pred CCCccceEEEEEeeCCCC-CCCcceEeEEEEEEe-cCccceeEe-ecCcceEEEcCCCCCceEEEEEEEEeccCcCccc-
Q psy8774 2 LKEEPEVTIELVWSQPTQ-TYGEILGYRVKYGVR-EHTLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQET- 77 (427)
Q Consensus 2 ~~~~~~~sv~l~W~~p~~-~~~~i~~Y~v~~~~~-~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~- 77 (427)
+.+++.+++.|+|.+... +..++.+|++++-.. -+..|.... ....+.+.|.+|.|++.|.|.|++.|..|.+.++
T Consensus 535 v~~v~~~~v~LsW~~~s~sg~vP~s~yiieafs~~~~etw~~ta~~v~~t~~~I~gL~P~~sylf~vRa~n~~Gis~Ps~ 614 (1281)
T KOG4222|consen 535 VVNVSRTSVTLSWQPTSPSGAVPASGYIIEAFSPDLGETWQTTAGRVKTTTYAIRGLKPNLSYLFLVRAENEQGISDPST 614 (1281)
T ss_pred cccCCCceEEecccCCCCCCccccchhHHHHhhhhhcccccccccccccceeeecCcCccceeeeeeeccccccccCCcc
Confidence 456788999999999874 456889999997543 344576665 6788999999999999999999999999977644
Q ss_pred -ceEEeCCCCCCCCCC------------eeeE---EEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCC-CceEEE
Q psy8774 78 -VRYYTTPEGPPTGPP------------ANIS---HHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDA-NNVIHR 140 (427)
Q Consensus 78 -~~~~~t~~~~p~~~p------------~~~~---~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~-~~~~~~ 140 (427)
+..++|.+..+..+- ..++ ....++.++.+.|..+.. .....+.+|.|.|+..... ..+...
T Consensus 615 ~S~~vrta~a~~~~a~ad~~k~~~~ls~~l~~l~~~~~L~asslr~~w~~~kq-~~~~~i~g~~I~~r~~~~~~a~~s~~ 693 (1281)
T KOG4222|consen 615 SSDPVRTAPADAAAAGADHQKVQRELSNELLRLSNPNVLNASSLRLGWTKDKQ-HGSQYIQGYRISYRSLGSQLAQWSNA 693 (1281)
T ss_pred cCCccccCCCChhhhhhhHHHHHHhhcccceeeccccccchhheeeeeeeecc-cCcccccceEEEeccCcccccccccc
Confidence 223444332221100 0112 224578899999998852 3345788999999987441 122222
Q ss_pred ---eeeeeEEEEccCCCCcEEEEEEEEeeCCCC---CCCCCCeEEEcccccC-CCCCce---EEEeeeCcEEEEEeeeCC
Q psy8774 141 ---NTTQTKAVFSNLEEGIEYSAEVQAITKAGP---GPWSPKLSLMTARDMV-RAPLGV---KALATSDQSVEVWWKPVP 210 (427)
Q Consensus 141 ---~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~---~~~s~~~~~~t~~~~p-~~p~~l---~~~~~~~~si~v~W~~p~ 210 (427)
.....++.+.+|.|++.|+|.++-+..+|. |..+....+.|.+.+| .+|.++ ..-..+.+++.|+|.+|+
T Consensus 694 ~v~~~t~~s~v~~nl~p~t~ye~f~~Pf~~~~~s~~g~pS~sk~alt~e~~PSapp~~~~~~s~~~~n~Ta~~Vsw~~pp 773 (1281)
T KOG4222|consen 694 GVTVPTPESVVVPNLKPGTNYEFFVRPFFPHGYSIQGAPSNSKTALTLEEPPSAPPQGVQHVSKGSYNGTAGSVSWAPPP 773 (1281)
T ss_pred ceeccCCcceeccccCCCccceeeccCccCCCcceecCCcccccccccccCCCCCCCCccccccccCCCceeeEEecCCc
Confidence 234788899999999999999999887554 4567777777766666 556664 444456789999999996
Q ss_pred CC--CCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEE
Q psy8774 211 AG--RGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVA 288 (427)
Q Consensus 211 ~~--~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~ 288 (427)
.. +|.+.+|.|....... .... . ...+.....+.+|.+|.++..|.|+
T Consensus 774 ~d~~ng~~qg~ki~~~~~e~--tr~h----~------------------------n~t~~a~~~sv~i~~l~~g~ay~vt 823 (1281)
T KOG4222|consen 774 ADVQNGILQGYKIECSGGEK--TRIH----I------------------------NKTTNARTGSVTIGNLVTGIAYSVT 823 (1281)
T ss_pred ccccCCcccceeEEeecCcc--cccc----c------------------------cccccCCCCceEeccccccceEEEE
Confidence 43 6899999998765421 1111 0 1123356678999999999999999
Q ss_pred EEEEeccCCCCCccceEEee
Q psy8774 289 VAARTVNGLGRLSGKVTVKV 308 (427)
Q Consensus 289 V~a~~~~G~g~~s~~~~~~t 308 (427)
|.+.+.+|.|..+.+..+.+
T Consensus 824 v~a~T~aGvG~~s~p~~~~~ 843 (1281)
T KOG4222|consen 824 VAARTGAGVGVKSPPQPIVF 843 (1281)
T ss_pred EeeecCCccCCCCCCeeeec
Confidence 99999999999887766553
No 8
>KOG4222|consensus
Probab=99.56 E-value=1e-13 Score=137.63 Aligned_cols=312 Identities=18% Similarity=0.169 Sum_probs=204.0
Q ss_pred ceEEEcCCCCCceEEEEEEEEeccCcCcccce------------EEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCC
Q psy8774 48 MSFLITNLERGVEYEFRIAGQNHIGYGQETVR------------YYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRT 115 (427)
Q Consensus 48 ~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~------------~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~ 115 (427)
.+..+.+|.-...|.+...+.+..|++..+.. ........-+.+|....+..++.++++|+|.+...
T Consensus 474 ~~l~i~dl~~~DtG~YTc~as~~~ges~wSatl~v~~~~~s~q~~r~~D~S~~pS~p~~p~v~~v~~~~v~LsW~~~s~- 552 (1281)
T KOG4222|consen 474 GSLRIRDLKGPDTGRYTCIASDESGESTWSATLTVEKAGSSQQFCRCEDPSALPSPPGTPGVVNVSRTSVTLSWQPTSP- 552 (1281)
T ss_pred ceeeeeeeecCCCcceeeeccCcccccccceeeEhhhcCcccccccCCChhhCCCCCCCCccccCCCceEEecccCCCC-
Confidence 45566677777778888888888887654321 11111112223455567778899999999999863
Q ss_pred CCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeE-EEccc-ccC-----
Q psy8774 116 HRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS-LMTAR-DMV----- 186 (427)
Q Consensus 116 ~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~-~~t~~-~~p----- 186 (427)
....++.+|.+++-.......|.... +..+.+.|.+|.|.+.|.|.|+|.|..|.+..+.... +++.. +..
T Consensus 553 sg~vP~s~yiieafs~~~~etw~~ta~~v~~t~~~I~gL~P~~sylf~vRa~n~~Gis~Ps~~S~~vrta~a~~~~a~ad 632 (1281)
T KOG4222|consen 553 SGAVPASGYIIEAFSPDLGETWQTTAGRVKTTTYAIRGLKPNLSYLFLVRAENEQGISDPSTSSDPVRTAPADAAAAGAD 632 (1281)
T ss_pred CCccccchhHHHHhhhhhcccccccccccccceeeecCcCccceeeeeeeccccccccCCcccCCccccCCCChhhhhhh
Confidence 34568899999876654455555443 5688999999999999999999999999875543322 23311 110
Q ss_pred --------C--CCCceEEEeeeCcEEEEEeeeCCCC-CCceeEEEEEEEecccccccccccccccccccccceeEEeeec
Q psy8774 187 --------R--APLGVKALATSDQSVEVWWKPVPAG-RGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMT 255 (427)
Q Consensus 187 --------~--~p~~l~~~~~~~~si~v~W~~p~~~-~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
. .........++.+++.+.|.....+ .+.|.+|+|.|+.... ....|..
T Consensus 633 ~~k~~~~ls~~l~~l~~~~~L~asslr~~w~~~kq~~~~~i~g~~I~~r~~~~-~~a~~s~------------------- 692 (1281)
T KOG4222|consen 633 HQKVQRELSNELLRLSNPNVLNASSLRLGWTKDKQHGSQYIQGYRISYRSLGS-QLAQWSN------------------- 692 (1281)
T ss_pred HHHHHHhhcccceeeccccccchhheeeeeeeecccCcccccceEEEeccCcc-ccccccc-------------------
Confidence 0 0011123345678999999988854 3689999999998744 2333310
Q ss_pred cccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccC---CCCCccceEEee---cCCCCCcceE---EeecCCCe
Q psy8774 256 AVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNG---LGRLSGKVTVKV---KPEDVPLSLR---AHDVSTHS 326 (427)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G---~g~~s~~~~~~t---~~~~~P~~l~---~~~~~~~~ 326 (427)
.........++.+.+|.|++.|.|.++-+...| .|..|....+.| .|..+|.+++ .-..+.++
T Consensus 693 --------~~v~~~t~~s~v~~nl~p~t~ye~f~~Pf~~~~~s~~g~pS~sk~alt~e~~PSapp~~~~~~s~~~~n~Ta 764 (1281)
T KOG4222|consen 693 --------AGVTVPTPESVVVPNLKPGTNYEFFVRPFFPHGYSIQGAPSNSKTALTLEEPPSAPPQGVQHVSKGSYNGTA 764 (1281)
T ss_pred --------cceeccCCcceeccccCCCccceeeccCccCCCcceecCCcccccccccccCCCCCCCCccccccccCCCce
Confidence 122344566888999999999999999998865 455555555544 3556677743 33457899
Q ss_pred EEEEecCCCc--CCCc--eEEEEEeheeecceee-eeeE---EEEeecccccccceEEEEEeecccCCCC
Q psy8774 327 MTLSWSPPIK--LNPV--KYKEVSEKIQERRLQK-YGQY---RYFETRDESYIGKRVERMEVRGRKGRGR 388 (427)
Q Consensus 327 v~l~W~~P~~--~~g~--~Y~i~~~~~~~~~l~~-~t~y---~~~~~~~~~~~~~~~~~v~a~~~~g~g~ 388 (427)
..|+|.+|.. -||+ +|.|..-..+...... .+.- .=..+..+-....|.|++.+.|.+|.|.
T Consensus 765 ~~Vsw~~pp~d~~ng~~qg~ki~~~~~e~tr~h~n~t~~a~~~sv~i~~l~~g~ay~vtv~a~T~aGvG~ 834 (1281)
T KOG4222|consen 765 GSVSWAPPPADVQNGILQGYKIECSGGEKTRIHINKTTNARTGSVTIGNLVTGIAYSVTVAARTGAGVGV 834 (1281)
T ss_pred eeEEecCCcccccCCcccceeEEeecCccccccccccccCCCCceEeccccccceEEEEEeeecCCccCC
Confidence 9999998854 3443 8998754333111110 0000 0012344566777899999999999997
No 9
>KOG4258|consensus
Probab=99.55 E-value=1.9e-13 Score=131.82 Aligned_cols=290 Identities=16% Similarity=0.220 Sum_probs=181.5
Q ss_pred eeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccC-------------CCceEEEee----------eeeEEEEc
Q psy8774 94 NISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKID-------------ANNVIHRNT----------TQTKAVFS 150 (427)
Q Consensus 94 ~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~-------------~~~~~~~~~----------~~~~~~i~ 150 (427)
++.....+.+++.++|......+.. ...+|.+.|++... ...|....+ ...-+.+.
T Consensus 493 ~~~~~~~~~dsi~lrW~~~~~~d~r-~llg~~~~yKEaP~qNvT~~dg~~aCg~~~W~~~~v~~~~~~p~~~~~~~~~l~ 571 (1025)
T KOG4258|consen 493 QFSSTVTSADSILLRWERYQPPDMR-DLLGFLLHYKEAPFQNVTEEDGRDACGSNSWNVVDVDPPDLIPNDGTHPGFLLD 571 (1025)
T ss_pred eeeeEEeecceeEEEecccCCcchh-hhheeeEeeccCCccccceecCccccccCcceEEeccCCcCCCccccccceehh
Confidence 4455567889999999977544333 56799999987531 111222211 12356889
Q ss_pred cCCCCcEEEEEEEEeeC--CCCC--CCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEec
Q psy8774 151 NLEEGIEYSAEVQAITK--AGPG--PWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMT 226 (427)
Q Consensus 151 ~L~p~t~Y~~~V~a~~~--~g~~--~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~ 226 (427)
+|+|+|+|.+.|++..- .+.. ..|+...++|..+.|.+|..+-.....++.|.|+|.+|..+||.++.|.|.|...
T Consensus 572 ~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~PspPl~~ls~snsSsqi~l~W~pP~~pNG~lt~Ylv~wer~ 651 (1025)
T KOG4258|consen 572 GLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIPSPPLDVLSKSNSSSQILLKWKPPSQPNGNLTHYLVVWERQ 651 (1025)
T ss_pred cCCccceeEEEEeeeehhhhccccccccceEEEEecCCCCCCcchhhhccCcchheeEEecCCCCCCCceeEEEEEEEec
Confidence 99999999999999732 2221 4688899999999999999888877777899999999999999999999998876
Q ss_pred ccccccccccccccccc-----------------------------------------------------cccceeEEee
Q psy8774 227 AVEDLDEWSQKSIPLTE-----------------------------------------------------SSNIARIFYT 253 (427)
Q Consensus 227 ~~~~~~~~~~~~~~~~~-----------------------------------------------------~~~~~~~~~~ 253 (427)
........ ++.+..+ +..+.+.++.
T Consensus 652 ~~~~yl~~--~nYC~~~~k~p~~~~~p~~~~ed~d~~~e~e~~~~~Cc~c~~~~~~~~~e~eea~~~~~FEd~L~n~i~v 729 (1025)
T KOG4258|consen 652 AEDGYLEQ--RNYCHKGLKLPIRADLPSFDSEDMDPLLEMEGHTGPCCSCPPTESYPQYEDEEASEQKTFEDFLHNAIFV 729 (1025)
T ss_pred cCCchHHH--hccccccccccccccCCCCchhhcchhhhhccCCCCCCCCCcccccCchhhHHHHHHHHHhhhccceeee
Confidence 42111100 0000000 0000011111
Q ss_pred e-------ccc--------------------------ccccccc-ccccCCCCceeccCCCCCCeEEEEEEEEeccCC--
Q psy8774 254 M-------TAV--------------------------EDLDEWS-QKSVPLTESAELTSLEKFTEYAVAVAARTVNGL-- 297 (427)
Q Consensus 254 ~-------~~~--------------------------~~~~~~~-~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~-- 297 (427)
. ..+ .+...-. .....+..++.+++|++++.|.+.+.|+|..+.
T Consensus 730 pr~~~~krk~l~~~~n~t~~~~~~~~~~p~t~~~t~p~ei~e~~p~~~n~n~~~~vi~~Lrh~tlY~i~l~aCnh~~~~~ 809 (1025)
T KOG4258|consen 730 PRRPDRKRKSLDDVENCTRLAPTRKAEEPTTPPTTAPTEIEEPKPRLENGNKESYVISGLRHFTLYRIDLQACNHATPKC 809 (1025)
T ss_pred cccCcccccccccccceeeccccccccCCCCCCCCCCccccccCcccccccchhhhhhccccchhhhhhHhhhccccccc
Confidence 0 000 0000000 000245567889999999999999999998764
Q ss_pred --CCCccceEEeec----CCCCCcceEEeec-CCCeEEEEecCCCcCCCc--eEEEEEeheee-ccee-----eeeeEEE
Q psy8774 298 --GRLSGKVTVKVK----PEDVPLSLRAHDV-STHSMTLSWSPPIKLNPV--KYKEVSEKIQE-RRLQ-----KYGQYRY 362 (427)
Q Consensus 298 --g~~s~~~~~~t~----~~~~P~~l~~~~~-~~~~v~l~W~~P~~~~g~--~Y~i~~~~~~~-~~l~-----~~t~y~~ 362 (427)
|..+. +..+|. ..+.|..+..... +.+++.|+|.+|.++||+ .|.|.++.... .... .+.++..
T Consensus 810 ~cS~a~~-v~~RT~~~~~aD~i~g~v~we~~~~~~~v~l~w~EP~~pNGli~~Y~Vk~r~~~~et~v~cvsR~~~~k~~g 888 (1025)
T KOG4258|consen 810 GCSHAAF-VFARTMPTMGADDIPGPVTWECHIEMNSVILRWLEPKEPNGLILNYEVKYRRNGDETHVECVSRMDYAKAGG 888 (1025)
T ss_pred ccchhhh-hhhccccccccccCCCceeEecccCcceEEEecCCCCCCCccEEEEEEEEeeccCcchhhhhhhhhhhhcCc
Confidence 22222 333332 2344555555544 789999999999999995 99998873221 1111 1122211
Q ss_pred EeecccccccceEEEEEeecccCCCC
Q psy8774 363 FETRDESYIGKRVERMEVRGRKGRGR 388 (427)
Q Consensus 363 ~~~~~~~~~~~~~~~v~a~~~~g~g~ 388 (427)
-... ...-+.|..+|||.+-+|.|+
T Consensus 889 v~l~-~l~~G~y~~~vratSlaGng~ 913 (1025)
T KOG4258|consen 889 VYLK-RLNPGNYSVRVRATSLAGNGS 913 (1025)
T ss_pred eEEE-ecCCCcEEEEEEEEeeccCCC
Confidence 1111 123456789999999999997
No 10
>KOG4258|consensus
Probab=99.41 E-value=6.8e-12 Score=121.29 Aligned_cols=271 Identities=20% Similarity=0.272 Sum_probs=175.7
Q ss_pred CccceEEEEEeeCCCCC-CCcceEeEEEEEEec--------------CccceeEe---e------cCcceEEEcCCCCCc
Q psy8774 4 EEPEVTIELVWSQPTQT-YGEILGYRVKYGVRE--------------HTLKENLV---N------SKNMSFLITNLERGV 59 (427)
Q Consensus 4 ~~~~~sv~l~W~~p~~~-~~~i~~Y~v~~~~~~--------------~~~~~~~~---~------~~~~~~~~~~L~p~t 59 (427)
..+.++|.|+|..-... .-...+|.++|+..- ...|.... + ....-+.+.+|.|.|
T Consensus 498 ~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP~qNvT~~dg~~aCg~~~W~~~~v~~~~~~p~~~~~~~~~l~~LkP~T 577 (1025)
T KOG4258|consen 498 VTSADSILLRWERYQPPDMRDLLGFLLHYKEAPFQNVTEEDGRDACGSNSWNVVDVDPPDLIPNDGTHPGFLLDGLKPWT 577 (1025)
T ss_pred EeecceeEEEecccCCcchhhhheeeEeeccCCccccceecCccccccCcceEEeccCCcCCCccccccceehhcCCccc
Confidence 35678999999875422 224678999987521 22465554 2 123467899999999
Q ss_pred eEEEEEEEEec--cCcCc---ccceEEeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCC
Q psy8774 60 EYEFRIAGQNH--IGYGQ---ETVRYYTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDA 134 (427)
Q Consensus 60 ~Y~~~V~a~~~--~g~~~---~~~~~~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~ 134 (427)
+|.+.|++... .+... +....++|....|. +|..+-..+.++..|.|.|++| ..+||.+..|.|.|......
T Consensus 578 qYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~Ps-pPl~~ls~snsSsqi~l~W~pP--~~pNG~lt~Ylv~wer~~~~ 654 (1025)
T KOG4258|consen 578 QYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDIPS-PPLDVLSKSNSSSQILLKWKPP--SQPNGNLTHYLVVWERQAED 654 (1025)
T ss_pred eeEEEEeeeehhhhccccccccceEEEEecCCCCC-CcchhhhccCcchheeEEecCC--CCCCCceeEEEEEEEeccCC
Confidence 99999999843 22222 23456788887774 5655555566677999999999 58889999999977542100
Q ss_pred --------------------------CceE-------------------------------------------EEe----
Q psy8774 135 --------------------------NNVI-------------------------------------------HRN---- 141 (427)
Q Consensus 135 --------------------------~~~~-------------------------------------------~~~---- 141 (427)
+... ...
T Consensus 655 ~yl~~~nYC~~~~k~p~~~~~p~~~~ed~d~~~e~e~~~~~Cc~c~~~~~~~~~e~eea~~~~~FEd~L~n~i~vpr~~~ 734 (1025)
T KOG4258|consen 655 GYLEQRNYCHKGLKLPIRADLPSFDSEDMDPLLEMEGHTGPCCSCPPTESYPQYEDEEASEQKTFEDFLHNAIFVPRRPD 734 (1025)
T ss_pred chHHHhccccccccccccccCCCCchhhcchhhhhccCCCCCCCCCcccccCchhhHHHHHHHHHhhhccceeeecccCc
Confidence 0000 000
Q ss_pred --------------------------------------------eeeeEEEEccCCCCcEEEEEEEEeeCCCC----CCC
Q psy8774 142 --------------------------------------------TTQTKAVFSNLEEGIEYSAEVQAITKAGP----GPW 173 (427)
Q Consensus 142 --------------------------------------------~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~----~~~ 173 (427)
...+++.|.+|..++.|.+.+.|.|..+. + .
T Consensus 735 ~krk~l~~~~n~t~~~~~~~~~~p~t~~~t~p~ei~e~~p~~~n~n~~~~vi~~Lrh~tlY~i~l~aCnh~~~~~~cS-~ 813 (1025)
T KOG4258|consen 735 RKRKSLDDVENCTRLAPTRKAEEPTTPPTTAPTEIEEPKPRLENGNKESYVISGLRHFTLYRIDLQACNHATPKCGCS-H 813 (1025)
T ss_pred ccccccccccceeeccccccccCCCCCCCCCCccccccCcccccccchhhhhhccccchhhhhhHhhhcccccccccc-h
Confidence 00124567789999999999999988665 3 1
Q ss_pred CCCeEEEcc-c-ccCCCCCceEEEee-eCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeE
Q psy8774 174 SPKLSLMTA-R-DMVRAPLGVKALAT-SDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARI 250 (427)
Q Consensus 174 s~~~~~~t~-~-~~p~~p~~l~~~~~-~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (427)
...+..+|. . +.-.-|..+.-... ..+++.|+|.+|+.+||.+..|.|.|+...........
T Consensus 814 a~~v~~RT~~~~~aD~i~g~v~we~~~~~~~v~l~w~EP~~pNGli~~Y~Vk~r~~~~et~v~cv--------------- 878 (1025)
T KOG4258|consen 814 AAFVFARTMPTMGADDIPGPVTWECHIEMNSVILRWLEPKEPNGLILNYEVKYRRNGDETHVECV--------------- 878 (1025)
T ss_pred hhhhhhccccccccccCCCceeEecccCcceEEEecCCCCCCCccEEEEEEEEeeccCcchhhhh---------------
Confidence 222223331 1 11011222222222 67899999999999999999999999977433222210
Q ss_pred EeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEe
Q psy8774 251 FYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307 (427)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~ 307 (427)
..........+.|..|.|| .|.++|+|...+|.|++.+...+-
T Consensus 879 -------------sR~~~~k~~gv~l~~l~~G-~y~~~vratSlaGng~~t~~~~~~ 921 (1025)
T KOG4258|consen 879 -------------SRMDYAKAGGVYLKRLNPG-NYSVRVRATSLAGNGSWTESVIFY 921 (1025)
T ss_pred -------------hhhhhhhcCceEEEecCCC-cEEEEEEEEeeccCCCCcCCcceE
Confidence 1111223446678889887 699999999999999988754443
No 11
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=99.29 E-value=1.9e-11 Score=89.55 Aligned_cols=85 Identities=29% Similarity=0.344 Sum_probs=69.1
Q ss_pred CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774 187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK 266 (427)
Q Consensus 187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (427)
++|.++++...+.+++.|+|+++...++.+.+|.|+|.......... ...
T Consensus 1 s~P~~l~v~~~~~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~~~~------------------------------~~~ 50 (85)
T PF00041_consen 1 SAPENLSVSNISPTSVTVSWKPPSSGNGPITGYRVEYRSVNSTSDWQ------------------------------EVT 50 (85)
T ss_dssp SSSEEEEEEEECSSEEEEEEEESSSTSSSESEEEEEEEETTSSSEEE------------------------------EEE
T ss_pred CcCcCeEEEECCCCEEEEEEECCCCCCCCeeEEEEEEEecccceeee------------------------------eee
Confidence 37899999999999999999999756689999999998874332111 123
Q ss_pred ccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCc
Q psy8774 267 SVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLS 301 (427)
Q Consensus 267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s 301 (427)
.......++|.+|.|++.|.|+|+|.+..|.|++|
T Consensus 51 ~~~~~~~~~i~~L~p~t~Y~~~v~a~~~~g~g~~S 85 (85)
T PF00041_consen 51 VPGNETSYTITGLQPGTTYEFRVRAVNSDGEGPPS 85 (85)
T ss_dssp EETTSSEEEEESCCTTSEEEEEEEEEETTEEEEEE
T ss_pred eeeeeeeeeeccCCCCCEEEEEEEEEeCCcCcCCC
Confidence 34456689999999999999999999999988765
No 12
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=99.20 E-value=1.5e-10 Score=84.68 Aligned_cols=81 Identities=27% Similarity=0.502 Sum_probs=67.3
Q ss_pred CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCCcEEEEEEEEeeCC
Q psy8774 91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQAITKA 168 (427)
Q Consensus 91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~a~~~~ 168 (427)
+|.++++...+.+++.|+|+++. ..++.+.+|.|+|+............ ...+.+.|.+|.|++.|.|+|+|.+..
T Consensus 2 ~P~~l~v~~~~~~sv~v~W~~~~--~~~~~~~~y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~v~a~~~~ 79 (85)
T PF00041_consen 2 APENLSVSNISPTSVTVSWKPPS--SGNGPITGYRVEYRSVNSTSDWQEVTVPGNETSYTITGLQPGTTYEFRVRAVNSD 79 (85)
T ss_dssp SSEEEEEEEECSSEEEEEEEESS--STSSSESEEEEEEEETTSSSEEEEEEEETTSSEEEEESCCTTSEEEEEEEEEETT
T ss_pred cCcCeEEEECCCCEEEEEEECCC--CCCCCeeEEEEEEEecccceeeeeeeeeeeeeeeeeccCCCCCEEEEEEEEEeCC
Confidence 58899999999999999999995 56679999999999885554233332 346689999999999999999999999
Q ss_pred CCCCC
Q psy8774 169 GPGPW 173 (427)
Q Consensus 169 g~~~~ 173 (427)
|.|++
T Consensus 80 g~g~~ 84 (85)
T PF00041_consen 80 GEGPP 84 (85)
T ss_dssp EEEEE
T ss_pred cCcCC
Confidence 87754
No 13
>KOG4802|consensus
Probab=98.85 E-value=5.9e-08 Score=86.89 Aligned_cols=129 Identities=19% Similarity=0.230 Sum_probs=90.4
Q ss_pred eeEEEEccCCCCcEEEEEEEEeeCCCCCCC---CCCeEEEcccccCCCCCceEEEeeeCc---EEEEEeeeCCCCCCcee
Q psy8774 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPW---SPKLSLMTARDMVRAPLGVKALATSDQ---SVEVWWKPVPAGRGKIL 217 (427)
Q Consensus 144 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~---s~~~~~~t~~~~p~~p~~l~~~~~~~~---si~v~W~~p~~~~g~i~ 217 (427)
.+.+.+.++.||.-|.|+|.|+|..|.-.+ |.+....-...+|.+|.++++..+..+ ...|-|.|++ .+-++.
T Consensus 208 e~~~~~t~~rPgRwyefrvaavn~~G~rGFs~PSkpf~ssk~pkaPp~P~dl~l~~v~~dG~~~~~v~w~P~~-sdlPv~ 286 (516)
T KOG4802|consen 208 ENTYIFTDMRPGRWYEFRVAAVNAYGFRGFSEPSKPFPSSKNPKAPPSPNDLKLIGVQFDGRYMLKVVWCPSK-SDLPVE 286 (516)
T ss_pred CceeeeeecCcceeEEEEEeeeecccccccCCCCCCCCCCCCCCCCcCcccceeeeeeecceEEEEEEeCCCC-CCCcce
Confidence 568899999999999999999998876444 444444445566789999988776543 4567777665 667899
Q ss_pred EEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCC
Q psy8774 218 GYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL 297 (427)
Q Consensus 218 ~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~ 297 (427)
.|+|.|.............+ ....-.+..+.|++|.|+..|.|.|.|....|.
T Consensus 287 ~Yki~Ws~~v~s~k~~m~tk---------------------------s~~~k~thq~si~~L~Pns~Y~VevqAi~y~g~ 339 (516)
T KOG4802|consen 287 KYKITWSLYVNSAKASMITK---------------------------SSYVKDTHQFSIKELLPNSSYYVEVQAISYLGS 339 (516)
T ss_pred eeEEEeehhhhhhhhhcccc---------------------------cceeeccchhhhhhcCCCCeEEEEEEEEEeccC
Confidence 99999987642211111110 011112234459999999999999999998886
Q ss_pred CCC
Q psy8774 298 GRL 300 (427)
Q Consensus 298 g~~ 300 (427)
+..
T Consensus 340 ~rL 342 (516)
T KOG4802|consen 340 RRL 342 (516)
T ss_pred ccc
Confidence 553
No 14
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=98.71 E-value=1.6e-07 Score=69.06 Aligned_cols=88 Identities=30% Similarity=0.411 Sum_probs=66.6
Q ss_pred CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774 187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK 266 (427)
Q Consensus 187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (427)
.+|.++.+.....+++.|+|+++...++.+.+|.|.+.... ...+ ...
T Consensus 2 ~~p~~~~~~~~~~~~~~v~W~~~~~~~~~~~~y~v~~~~~~---~~~~-----------------------------~~~ 49 (93)
T cd00063 2 SPPTNLRVTDVTSTSVTLSWTPPEDDGGPITGYVVEYREKG---SGDW-----------------------------KEV 49 (93)
T ss_pred cCCCCcEEEEecCCEEEEEECCCCCCCCcceeEEEEEeeCC---CCCC-----------------------------EEe
Confidence 46777888887889999999999755567889999998763 1122 111
Q ss_pred cc--CCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEE
Q psy8774 267 SV--PLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTV 306 (427)
Q Consensus 267 ~~--~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~ 306 (427)
.. .....+.+.+|.|++.|.|+|+|.+..|.|.++....+
T Consensus 50 ~~~~~~~~~~~i~~l~p~~~Y~~~v~a~~~~~~~~~s~~~~~ 91 (93)
T cd00063 50 EVTPGSETSYTLTGLKPGTEYEFRVRAVNGGGESPPSESVTV 91 (93)
T ss_pred eccCCcccEEEEccccCCCEEEEEEEEECCCccCCCcccccc
Confidence 22 35678899999999999999999998888877664433
No 15
>KOG4802|consensus
Probab=98.62 E-value=6e-07 Score=80.61 Aligned_cols=160 Identities=16% Similarity=0.262 Sum_probs=101.1
Q ss_pred ccceEEEEEeeCCCCCCCcceEeEEEE------------EEecCccceeEe-ecCcceEEEcCCCCCceEEEEEEEEecc
Q psy8774 5 EPEVTIELVWSQPTQTYGEILGYRVKY------------GVREHTLKENLV-NSKNMSFLITNLERGVEYEFRIAGQNHI 71 (427)
Q Consensus 5 ~~~~sv~l~W~~p~~~~~~i~~Y~v~~------------~~~~~~~~~~~~-~~~~~~~~~~~L~p~t~Y~~~V~a~~~~ 71 (427)
...+++.+.|..-. ....|.+.+ +..+...|+.+. ......+.++++.||.-|+|+|.|+|..
T Consensus 157 ~~~g~~av~w~~~~----~~~v~~~~~~vr~~w~~g~hase~~~thwQtv~~t~~e~~~~~t~~rPgRwyefrvaavn~~ 232 (516)
T KOG4802|consen 157 RSRGSHAVDWKIES----SLLVYYVHVEVRSHWGRGFHASELGPTHWQTVEKTMEENTYIFTDMRPGRWYEFRVAAVNAY 232 (516)
T ss_pred hccCceeeeeeecc----ccceeeeehhhhhhhcccccccccccccceeeeecCCCceeeeeecCcceeEEEEEeeeecc
Confidence 44566788888643 122222222 122233576665 5555689999999999999999999988
Q ss_pred Cc---CcccceEEeCCCCCCCCCCeeeEEEeecC---CEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE-----
Q psy8774 72 GY---GQETVRYYTTPEGPPTGPPANISHHFQTP---DVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR----- 140 (427)
Q Consensus 72 g~---~~~~~~~~~t~~~~p~~~p~~~~~~~~~~---~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~----- 140 (427)
|. +.++...-.+....++.+|.++++..+.. -...|-|.|+. .+-++.+|.|.|..........+.
T Consensus 233 G~rGFs~PSkpf~ssk~pkaPp~P~dl~l~~v~~dG~~~~~v~w~P~~---sdlPv~~Yki~Ws~~v~s~k~~m~tks~~ 309 (516)
T KOG4802|consen 233 GFRGFSEPSKPFPSSKNPKAPPSPNDLKLIGVQFDGRYMLKVVWCPSK---SDLPVEKYKITWSLYVNSAKASMITKSSY 309 (516)
T ss_pred cccccCCCCCCCCCCCCCCCCcCcccceeeeeeecceEEEEEEeCCCC---CCCcceeeEEEeehhhhhhhhhcccccce
Confidence 74 33333333333333334688888775432 23567777763 335899999999765322111111
Q ss_pred eeeeeEEEEccCCCCcEEEEEEEEeeCCCCC
Q psy8774 141 NTTQTKAVFSNLEEGIEYSAEVQAITKAGPG 171 (427)
Q Consensus 141 ~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~ 171 (427)
..+...+.|.+|.|+..|.|.|.|....|.+
T Consensus 310 ~k~thq~si~~L~Pns~Y~VevqAi~y~g~~ 340 (516)
T KOG4802|consen 310 VKDTHQFSIKELLPNSSYYVEVQAISYLGSR 340 (516)
T ss_pred eeccchhhhhhcCCCCeEEEEEEEEEeccCc
Confidence 1223345599999999999999999887776
No 16
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=98.55 E-value=1.5e-06 Score=63.87 Aligned_cols=84 Identities=27% Similarity=0.474 Sum_probs=63.1
Q ss_pred CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe---eeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774 91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN---TTQTKAVFSNLEEGIEYSAEVQAITK 167 (427)
Q Consensus 91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~V~a~~~ 167 (427)
+|.++.+......++.|+|+++.. .++.+.+|.|.+.... ...+.... .....+.+.+|.|++.|.|+|+|.+.
T Consensus 3 ~p~~~~~~~~~~~~~~v~W~~~~~--~~~~~~~y~v~~~~~~-~~~~~~~~~~~~~~~~~~i~~l~p~~~Y~~~v~a~~~ 79 (93)
T cd00063 3 PPTNLRVTDVTSTSVTLSWTPPED--DGGPITGYVVEYREKG-SGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG 79 (93)
T ss_pred CCCCcEEEEecCCEEEEEECCCCC--CCCcceeEEEEEeeCC-CCCCEEeeccCCcccEEEEccccCCCEEEEEEEEECC
Confidence 466777777788999999999852 2256779999998763 22333332 26788999999999999999999988
Q ss_pred CCCCCCCCCe
Q psy8774 168 AGPGPWSPKL 177 (427)
Q Consensus 168 ~g~~~~s~~~ 177 (427)
.|.|.++...
T Consensus 80 ~~~~~~s~~~ 89 (93)
T cd00063 80 GGESPPSESV 89 (93)
T ss_pred CccCCCcccc
Confidence 7777665533
No 17
>COG3401 Fibronectin type 3 domain-containing protein [General function prediction only]
Probab=98.52 E-value=1.3e-05 Score=70.97 Aligned_cols=322 Identities=11% Similarity=0.013 Sum_probs=173.8
Q ss_pred cceEeEEEEEEecCccceeEe---ecCcceEEEcCCCCCceEEEEEEEEeccCcCcccce-EEeCC-CCCCCCCCeeeEE
Q psy8774 23 EILGYRVKYGVREHTLKENLV---NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVR-YYTTP-EGPPTGPPANISH 97 (427)
Q Consensus 23 ~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~-~~~t~-~~~p~~~p~~~~~ 97 (427)
.+.+|.+.....+.. ..... ....+++....|.+++.|.+.....+..-.+..+.. ...+. ... .+.+..
T Consensus 4 ~~~~~~~~~t~~~~~-~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~i~~----~~~~~~ 78 (343)
T COG3401 4 DIDGFVLYRTKKDLK-LKRIGTIKNKYQTHYYDEGLEGEESYPYQEGTTKVDKISYDSERILVKTSFIER----VRSVFA 78 (343)
T ss_pred cceeEEEEEEcccch-hhhhhccccchhhhhhhccccccCcceeeecccccceeeecCcceEEEeeeccc----cccccc
Confidence 456676655444433 22221 556788889999999999988877765532222221 12221 111 112222
Q ss_pred EeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE-eee--eeEEEEccCCCCcEEEEEEEEeeCCCCCCCC
Q psy8774 98 HFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR-NTT--QTKAVFSNLEEGIEYSAEVQAITKAGPGPWS 174 (427)
Q Consensus 98 ~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~-~~~--~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s 174 (427)
.-..+..+.+.|.+.+. -....|.|+....+.. ....- ..+ ...+.-.+|.++..|...|.+.+..+.-..|
T Consensus 79 ~~~~~~~~~~~w~~~~d----~~~~~Y~i~~~~gD~~-f~r~~~~~n~l~~~~i~s~~~~~~~~~~~Iia~~f~~~~sfs 153 (343)
T COG3401 79 SLERPKSVKVFWSPHPD----VSVGKYIIQRQNGDGK-FLRTGLVKNRLFVEFIDSDLGHNEKYMELIIAADFQMGKSFS 153 (343)
T ss_pred hhcCcceeeecccccCC----CCCCeEEEEEecCchh-hhhhhHHHhccchhheecccccccceeeeEEeecccccceee
Confidence 22345679999998752 3566899987765322 11111 111 3334556899999999999999776553333
Q ss_pred CCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeee
Q psy8774 175 PKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTM 254 (427)
Q Consensus 175 ~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (427)
-...-.++...|..-.++.+.....+.+.|+|+.++. +..|.|+-....... ...
T Consensus 154 f~gVE~~~~~~P~ei~~~~~~~d~~~~i~ls~dg~~~----~~yy~IY~~~~g~e~-~~~-------------------- 208 (343)
T COG3401 154 FTGVEATPKAEPKEITNVRVSFDLGNNIELSEDGSEA----EDYYRIYASDSGNEE-YGF-------------------- 208 (343)
T ss_pred eeeeecccccCCceeeeeeeecCCCCcceeeccCccc----cceEEEeccCCcccc-ccc--------------------
Confidence 1111122333444455556666678899999998873 338888665542211 111
Q ss_pred ccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccC-CCCCccceEEeecCCCCCcceEEee-cCCCeEEEEec
Q psy8774 255 TAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNG-LGRLSGKVTVKVKPEDVPLSLRAHD-VSTHSMTLSWS 332 (427)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G-~g~~s~~~~~~t~~~~~P~~l~~~~-~~~~~v~l~W~ 332 (427)
......+.......+| |..|...|.++...| ++..+....+......++....... .....+-|.|+
T Consensus 209 ---------ia~t~~n~y~d~~egl--ga~~~y~VTtVd~~~~es~lp~~~t~~~~~g~~e~pt~~g~t~~~s~i~V~~E 277 (343)
T COG3401 209 ---------IAQTTENSYYDVKEGL--GAVEYYKVTTVDNTGFESDLPNEPTVGETGGRYEVPTIPGETTEASFIGVAAE 277 (343)
T ss_pred ---------eeeccccchhhhhhcc--CceeEEEEEEEcCCcceeccCCccccccccCCcccccCCCceeeeeeeeEEec
Confidence 1111122222334455 778888899988655 6666664444422222211111111 22334457777
Q ss_pred CCCcCCCceEEEEEeheeecceeee-eeEEEEeecccccccceEEEEEeecccCCCCcch
Q psy8774 333 PPIKLNPVKYKEVSEKIQERRLQKY-GQYRYFETRDESYIGKRVERMEVRGRKGRGRPKK 391 (427)
Q Consensus 333 ~P~~~~g~~Y~i~~~~~~~~~l~~~-t~y~~~~~~~~~~~~~~~~~v~a~~~~g~g~p~~ 391 (427)
.-....++.|.+..-+- .....-+ ..+.-....+......+.+.|.+...+|...+..
T Consensus 278 ~~~~~~av~ytvyr~~~-g~~~~~f~it~~d~~d~~~ltg~~~~y~v~~v~~~gls~~~~ 336 (343)
T COG3401 278 QNQLRQAVTYTVYRVED-GTPTKFFTITETDGQDNDMLTGVEYRYEVVAVDKAGLSSHPS 336 (343)
T ss_pred ccccceeeEEeeeeccC-CCcceeeeeeeccccchhhccccceeEEEEEecccccccCCc
Confidence 66545555555432111 0011111 1222223445567778888999999999887643
No 18
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=98.50 E-value=0.00029 Score=62.74 Aligned_cols=245 Identities=13% Similarity=0.154 Sum_probs=123.1
Q ss_pred ecCcceEEEcCCCCCceEEEEEEEEecc-CcCc-ccceEEeCCCCCCCCCCeee-----EEEee-cCCE-EEEEeeCCCC
Q psy8774 44 NSKNMSFLITNLERGVEYEFRIAGQNHI-GYGQ-ETVRYYTTPEGPPTGPPANI-----SHHFQ-TPDV-VCITWDPPLR 114 (427)
Q Consensus 44 ~~~~~~~~~~~L~p~t~Y~~~V~a~~~~-g~~~-~~~~~~~t~~~~p~~~p~~~-----~~~~~-~~~~-v~v~W~~p~~ 114 (427)
....+.++|.+|.|++.|.|.|.++|.. |.+. .......+.+...+ .|..| ..... .... -..+...|..
T Consensus 11 vg~~t~~t~~~L~p~t~YyfdVF~vn~~~n~ssay~gt~~~t~~~~r~-~~~~Lkdg~l~~~~l~~~~g~~~f~f~vP~~ 89 (300)
T PF10179_consen 11 VGQKTNQTLSGLKPDTTYYFDVFVVNQLTNNSSAYLGTFARTREENRS-KPTRLKDGKLTQVKLKGKGGFKFFSFKVPKR 89 (300)
T ss_pred cCCCceEEeccCCCCCeEEEEEEEEECCCCceeeeeEEEEEEccccCC-CcEEcccCcEEEEEECCcCceeEEEEcCCcC
Confidence 5567899999999999999999999874 3332 22223333222111 12222 11111 1222 2334443311
Q ss_pred CCCCcceeEEEEEEEEc-------cCCCceEEE-e-eeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeE-EEc---
Q psy8774 115 THRNGQIVLYNVKFHKK-------IDANNVIHR-N-TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS-LMT--- 181 (427)
Q Consensus 115 ~~~~~~i~~Y~v~~~~~-------~~~~~~~~~-~-~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~-~~t--- 181 (427)
...+..+ .+.|.-+.. ..+...... . ..-..+.+.++.||..|.+++.+.+... +.....+. ..+
T Consensus 90 ~~~~~~~-~l~v~~C~G~V~v~i~r~gk~l~~~~~v~~~~~f~l~~~~~g~~Yliri~~~~~~e-~~~~~kV~aast~~~ 167 (300)
T PF10179_consen 90 SSTHQSL-WLFVQSCSGSVRVEISRNGKILLSQKNVEGLRHFRLSGVKPGERYLIRIQISNSDE-GPSTFKVQAASTNPS 167 (300)
T ss_pred CCCCccE-EEEEEeCCCeEEEEEEECCeEEeeeecccceEEEEECCCCCCCeEEEEEEccCCCC-CceEEEEEEecCCcc
Confidence 1111112 122221111 002111111 1 2357789999999999999998776432 22232333 233
Q ss_pred ccccCCCCCceEEEeee----CcEEEEEeeeCCCCCCceeEEEEEEEecccc-cc-ccccccccccccccccee--EEee
Q psy8774 182 ARDMVRAPLGVKALATS----DQSVEVWWKPVPAGRGKILGYQIFYTMTAVE-DL-DEWSQKSIPLTESSNIAR--IFYT 253 (427)
Q Consensus 182 ~~~~p~~p~~l~~~~~~----~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~--~~~~ 253 (427)
...-|.-|.+..+...+ -++++|.|.+..+. . ..|=|+.+..... .. ......+.|.+.++.... ....
T Consensus 168 ~~~~P~LP~d~~Ik~f~~lrtC~SvTIAW~~s~d~--~-~kYCvy~~~~~~~~~~~~~~~~~n~C~~~~sr~k~e~v~Ck 244 (300)
T PF10179_consen 168 KQPYPQLPDDTSIKEFNKLRTCNSVTIAWLGSPDR--S-IKYCVYRREEHSNYQERSVSRMPNQCLGPESRKKSEKVLCK 244 (300)
T ss_pred cCCCCCCCCCCceeEEcCCcccceEEEEEecCCCC--C-ceEEEEEEEecCchhhhhhcccCccCCCCCccccceEEEEE
Confidence 23456788888886654 47999999987631 2 5788877765332 01 111111223222111110 0000
Q ss_pred -eccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCC
Q psy8774 254 -MTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLG 298 (427)
Q Consensus 254 -~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g 298 (427)
....+. .......-...+|.+|+||+.|.|.|.+.-..|.+
T Consensus 245 ~~~~~n~----~~~~~~~v~tetI~~L~PG~~Yl~dV~~~~~~G~s 286 (300)
T PF10179_consen 245 YFHSPNS----SEDPQRAVTTETIKGLKPGTTYLFDVYVNGPSGQS 286 (300)
T ss_pred EEcCCcc----ccccccccceeecccCCCCcEEEEEEEEecCCCce
Confidence 000000 00011122355799999999999999998766543
No 19
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=98.31 E-value=6.4e-06 Score=58.68 Aligned_cols=80 Identities=28% Similarity=0.419 Sum_probs=54.2
Q ss_pred CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774 187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK 266 (427)
Q Consensus 187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (427)
.+|.++.+.....+++.|+|+++....+ .+|.+.|..........+ ...
T Consensus 2 ~~p~~~~~~~~~~~~~~v~W~~~~~~~~--~~y~~~~~~~~~~~~~~~-----------------------------~~~ 50 (83)
T smart00060 2 SPPSNLRVTDVTSTSVTLSWEPPPDDGI--TGYIVGYRVEYREEGSSW-----------------------------KEV 50 (83)
T ss_pred CCCCcEEEEEEeCCEEEEEECCCCCCCC--CccEEEEEEEEecCCCcc-----------------------------EEE
Confidence 3455678877778899999997763322 778888776532211111 111
Q ss_pred c-cCCCCceeccCCCCCCeEEEEEEEEeccCC
Q psy8774 267 S-VPLTESAELTSLEKFTEYAVAVAARTVNGL 297 (427)
Q Consensus 267 ~-~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~ 297 (427)
. ......+.+.+|.|++.|.|+|+|.+..|.
T Consensus 51 ~~~~~~~~~~i~~L~~~~~Y~v~v~a~~~~g~ 82 (83)
T smart00060 51 NVTPSSTSYTLTGLKPGTEYEFRVRAVNGAGE 82 (83)
T ss_pred EecCCccEEEEeCcCCCCEEEEEEEEEcccCC
Confidence 1 122568899999999999999999987553
No 20
>KOG3632|consensus
Probab=98.23 E-value=3.9e-06 Score=83.24 Aligned_cols=206 Identities=17% Similarity=0.216 Sum_probs=134.5
Q ss_pred ccceEEEEEeeCCC--CCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCC-CCceEEEEEEEEeccCcCcccceEE
Q psy8774 5 EPEVTIELVWSQPT--QTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLE-RGVEYEFRIAGQNHIGYGQETVRYY 81 (427)
Q Consensus 5 ~~~~sv~l~W~~p~--~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~-p~t~Y~~~V~a~~~~g~~~~~~~~~ 81 (427)
....++.|-|++|. ...+++..|.+..-.. ........+.+...+..|. .+..|.+.|.+..+.|.+.......
T Consensus 589 qla~sv~vawepps~pP~~~~~~~~~~~v~~e---lrq~l~~gs~tka~~E~ld~~a~s~~isvq~ltSrGsqd~lrc~L 665 (1335)
T KOG3632|consen 589 QLAGSVHVAWEPPSSPPFTAPARMIGATVLME---LRQTLYAGSLTKAMQESLDNSAHSGYISVQRLTSRGSQDQLRCIL 665 (1335)
T ss_pred hhccceeeeccCCCCCCccccceeeeeecchh---hhhhcccccchHHHHhhccccCCceeeehhhhhccCCCCcceeeE
Confidence 35678999999976 2344566677653221 1111112333333333432 2445778888888888877665555
Q ss_pred eCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEE
Q psy8774 82 TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAE 161 (427)
Q Consensus 82 ~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 161 (427)
-+...++ ..|.++++...+.++..++|-+... .. -.+.|... ............+.|.+|.|++.|.++
T Consensus 666 lvgg~a~-vvpsqlrv~n~tqtSa~itwvp~ns-----n~--~Hviyln~---eE~~ps~a~~y~ytf~~lrpgt~y~a~ 734 (1335)
T KOG3632|consen 666 LVGGAAP-VVPSQLRVWNATQTSAMITWVPFNS-----NF--LHVIYLNA---EEPRPSVAEMYNYTFMRLRPGTDYWAS 734 (1335)
T ss_pred ecccccc-ccchhhhhhhhhchhhheeeeecCC-----Cc--ceeeecCC---ccCCCchhhhhHHHHhccCCCCcccee
Confidence 5555555 5689999999999999999987731 11 12233322 112222233556788899999999999
Q ss_pred EEEeeCC-C--------CCCCCCCeEEEc-ccccCCCCCceEEEee-eCcEEEEEeeeCCCC-----CC-ceeEEEEEEE
Q psy8774 162 VQAITKA-G--------PGPWSPKLSLMT-ARDMVRAPLGVKALAT-SDQSVEVWWKPVPAG-----RG-KILGYQIFYT 224 (427)
Q Consensus 162 V~a~~~~-g--------~~~~s~~~~~~t-~~~~p~~p~~l~~~~~-~~~si~v~W~~p~~~-----~g-~i~~Y~I~~~ 224 (427)
|-+.-.. + .+.....+.|+| .+++|.+|.++++..- ....+.++|.+|... || .+++|.|+..
T Consensus 735 vea~~p~q~pwdl~~v~~etr~atv~f~tLpAGppappldV~vE~g~spg~l~vswrPptldsag~sngv~vtgYavyad 814 (1335)
T KOG3632|consen 735 VEAALPRQEPWDLRMVPMETRQATVLFRTLPAGPPAPPLDVKVETGGSPGRLEVSWRPPTLDSAGCSNGVAVTGYAVYAD 814 (1335)
T ss_pred cccccCcCCCcccccchhhhhccceeeecccCCCCCCchheeeecCCCCceeeeeccCceeccccccCceeeeeeeeeeC
Confidence 9887541 1 122355677877 7788999999998774 467899999998753 33 7899999765
No 21
>KOG3632|consensus
Probab=98.08 E-value=1.7e-05 Score=78.85 Aligned_cols=219 Identities=18% Similarity=0.227 Sum_probs=138.6
Q ss_pred CeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCC-CCcEEEEEEEEeeCCCC
Q psy8774 92 PANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLE-EGIEYSAEVQAITKAGP 170 (427)
Q Consensus 92 p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~-p~t~Y~~~V~a~~~~g~ 170 (427)
|+.+.+......++.|.|++|...-..+....|.+..... -.......+.+...+..|. ....|.+.|.+..+.|.
T Consensus 581 pr~~~~vkqla~sv~vawepps~pP~~~~~~~~~~~v~~e---lrq~l~~gs~tka~~E~ld~~a~s~~isvq~ltSrGs 657 (1335)
T KOG3632|consen 581 PRTGAAVKQLAGSVHVAWEPPSSPPFTAPARMIGATVLME---LRQTLYAGSLTKAMQESLDNSAHSGYISVQRLTSRGS 657 (1335)
T ss_pred ccchhhhhhhccceeeeccCCCCCCccccceeeeeecchh---hhhhcccccchHHHHhhccccCCceeeehhhhhccCC
Confidence 4455555667789999999986433344566666543211 1111122334444455553 45668889999988888
Q ss_pred CCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeE
Q psy8774 171 GPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARI 250 (427)
Q Consensus 171 ~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (427)
+.....+.. .....+..|.++++-+.+.++..++|-+-.. . .-..|+.... +
T Consensus 658 qd~lrc~Ll-vgg~a~vvpsqlrv~n~tqtSa~itwvp~ns---n-~~Hviyln~e------E----------------- 709 (1335)
T KOG3632|consen 658 QDQLRCILL-VGGAAPVVPSQLRVWNATQTSAMITWVPFNS---N-FLHVIYLNAE------E----------------- 709 (1335)
T ss_pred CCcceeeEe-ccccccccchhhhhhhhhchhhheeeeecCC---C-cceeeecCCc------c-----------------
Confidence 755543333 3455668999999999999999999976651 1 2222322211 1
Q ss_pred EeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEecc---------CCCCCccceEEeecCC---CCCcceE
Q psy8774 251 FYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVN---------GLGRLSGKVTVKVKPE---DVPLSLR 318 (427)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~---------G~g~~s~~~~~~t~~~---~~P~~l~ 318 (427)
..........++|.+|.|++.|.++|-|.-.. -.+..+..+.|+|.+. .||.+++
T Consensus 710 -------------~~ps~a~~y~ytf~~lrpgt~y~a~vea~~p~q~pwdl~~v~~etr~atv~f~tLpAGppappldV~ 776 (1335)
T KOG3632|consen 710 -------------PRPSVAEMYNYTFMRLRPGTDYWASVEAALPRQEPWDLRMVPMETRQATVLFRTLPAGPPAPPLDVK 776 (1335)
T ss_pred -------------CCCchhhhhHHHHhccCCCCccceecccccCcCCCcccccchhhhhccceeeecccCCCCCCchhee
Confidence 11233445578899999999999999987651 1234456678887644 4566777
Q ss_pred Eee-cCCCeEEEEecCCCc-----CCCc---eEEEEEeheeecce
Q psy8774 319 AHD-VSTHSMTLSWSPPIK-----LNPV---KYKEVSEKIQERRL 354 (427)
Q Consensus 319 ~~~-~~~~~v~l~W~~P~~-----~~g~---~Y~i~~~~~~~~~l 354 (427)
+.. .+.+.+.++|.||.- .||+ +|.|+....+...+
T Consensus 777 vE~g~spg~l~vswrPptldsag~sngv~vtgYavyadgqkv~Ev 821 (1335)
T KOG3632|consen 777 VETGGSPGRLEVSWRPPTLDSAGCSNGVAVTGYAVYADGQKVEEV 821 (1335)
T ss_pred eecCCCCceeeeeccCceeccccccCceeeeeeeeeeCCceeeee
Confidence 765 468899999999852 4553 89988664444333
No 22
>COG3401 Fibronectin type 3 domain-containing protein [General function prediction only]
Probab=98.00 E-value=0.00077 Score=59.96 Aligned_cols=244 Identities=12% Similarity=0.060 Sum_probs=137.8
Q ss_pred ceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEe---ecCcceEEEcCCCCCceEEEEEEEEeccCcCccc-ceEEe
Q psy8774 7 EVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLV---NSKNMSFLITNLERGVEYEFRIAGQNHIGYGQET-VRYYT 82 (427)
Q Consensus 7 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~---~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~-~~~~~ 82 (427)
+.++.+-|.+..+ -++..|.|+....++. +.... ..-.-.+.-.+|.++..|...|.+.+..+.-..+ ...-.
T Consensus 83 ~~~~~~~w~~~~d--~~~~~Y~i~~~~gD~~-f~r~~~~~n~l~~~~i~s~~~~~~~~~~~Iia~~f~~~~sfsf~gVE~ 159 (343)
T COG3401 83 PKSVKVFWSPHPD--VSVGKYIIQRQNGDGK-FLRTGLVKNRLFVEFIDSDLGHNEKYMELIIAADFQMGKSFSFTGVEA 159 (343)
T ss_pred cceeeecccccCC--CCCCeEEEEEecCchh-hhhhhHHHhccchhheecccccccceeeeEEeecccccceeeeeeeec
Confidence 4568899999763 3677899998766655 32222 2223344556899999999999999877654433 22223
Q ss_pred CCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEE
Q psy8774 83 TPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEV 162 (427)
Q Consensus 83 t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 162 (427)
+....|+. -.++++.....+.+.|+|+.+. ....|.|+-................+.+.-.--.-|..|...|
T Consensus 160 ~~~~~P~e-i~~~~~~~d~~~~i~ls~dg~~------~~~yy~IY~~~~g~e~~~~ia~t~~n~y~d~~eglga~~~y~V 232 (343)
T COG3401 160 TPKAEPKE-ITNVRVSFDLGNNIELSEDGSE------AEDYYRIYASDSGNEEYGFIAQTTENSYYDVKEGLGAVEYYKV 232 (343)
T ss_pred ccccCCce-eeeeeeecCCCCcceeeccCcc------ccceEEEeccCCccccccceeeccccchhhhhhccCceeEEEE
Confidence 32233321 2344455567788999999874 2227888766553333333333334444333333377888888
Q ss_pred EEeeCCC-CCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccc
Q psy8774 163 QAITKAG-PGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPL 241 (427)
Q Consensus 163 ~a~~~~g-~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~ 241 (427)
.++...| .+..+.........+.+..|.-..-. ...+.+.|.|+.... .....|.++-... +...
T Consensus 233 TtVd~~~~es~lp~~~t~~~~~g~~e~pt~~g~t-~~~s~i~V~~E~~~~--~~av~ytvyr~~~-g~~~---------- 298 (343)
T COG3401 233 TTVDNTGFESDLPNEPTVGETGGRYEVPTIPGET-TEASFIGVAAEQNQL--RQAVTYTVYRVED-GTPT---------- 298 (343)
T ss_pred EEEcCCcceeccCCccccccccCCcccccCCCce-eeeeeeeEEeccccc--ceeeEEeeeeccC-CCcc----------
Confidence 8887544 34445444433322222222221111 123455677776641 2345555543332 1010
Q ss_pred cccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCC
Q psy8774 242 TESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL 297 (427)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~ 297 (427)
.......+...+..+..+..|.+.|.+.+..|-
T Consensus 299 -----------------------~~f~it~~d~~d~~~ltg~~~~y~v~~v~~~gl 331 (343)
T COG3401 299 -----------------------KFFTITETDGQDNDMLTGVEYRYEVVAVDKAGL 331 (343)
T ss_pred -----------------------eeeeeeeccccchhhccccceeEEEEEeccccc
Confidence 011122345567778889999999999998874
No 23
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=97.97 E-value=0.00018 Score=50.89 Aligned_cols=75 Identities=25% Similarity=0.422 Sum_probs=51.1
Q ss_pred CeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC--ceEEEe--eeeeEEEEccCCCCcEEEEEEEEeeC
Q psy8774 92 PANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIHRN--TTQTKAVFSNLEEGIEYSAEVQAITK 167 (427)
Q Consensus 92 p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~--~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~a~~~ 167 (427)
|..+.+......++.|+|+++.. .. . .+|.+.|....... .+.... .....+.+.+|.|++.|.|+|+|.+.
T Consensus 4 p~~~~~~~~~~~~~~v~W~~~~~--~~-~-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~~~Y~v~v~a~~~ 79 (83)
T smart00060 4 PSNLRVTDVTSTSVTLSWEPPPD--DG-I-TGYIVGYRVEYREEGSSWKEVNVTPSSTSYTLTGLKPGTEYEFRVRAVNG 79 (83)
T ss_pred CCcEEEEEEeCCEEEEEECCCCC--CC-C-CccEEEEEEEEecCCCccEEEEecCCccEEEEeCcCCCCEEEEEEEEEcc
Confidence 44577777777799999997742 21 1 57777776543221 122222 22578999999999999999999986
Q ss_pred CCC
Q psy8774 168 AGP 170 (427)
Q Consensus 168 ~g~ 170 (427)
.|.
T Consensus 80 ~g~ 82 (83)
T smart00060 80 AGE 82 (83)
T ss_pred cCC
Confidence 543
No 24
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=97.89 E-value=0.0033 Score=56.15 Aligned_cols=118 Identities=15% Similarity=0.196 Sum_probs=73.0
Q ss_pred CCCceeccCCCCCCeEEEEEEEEeccCCCCCccceE-EeecC-----CCCCcceEEeecC----CCeEEEEecCCCcCCC
Q psy8774 270 LTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVT-VKVKP-----EDVPLSLRAHDVS----THSMTLSWSPPIKLNP 339 (427)
Q Consensus 270 ~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~-~~t~~-----~~~P~~l~~~~~~----~~~v~l~W~~P~~~~g 339 (427)
.-..+.+.++.||..|.+++.+.+.. ++.....+. .+|.+ +..|.++.+...+ =++++|.|.+-.+..
T Consensus 126 ~~~~f~l~~~~~g~~Yliri~~~~~~-e~~~~~kV~aast~~~~~~~P~LP~d~~Ik~f~~lrtC~SvTIAW~~s~d~~- 203 (300)
T PF10179_consen 126 GLRHFRLSGVKPGERYLIRIQISNSD-EGPSTFKVQAASTNPSKQPYPQLPDDTSIKEFNKLRTCNSVTIAWLGSPDRS- 203 (300)
T ss_pred ceEEEEECCCCCCCeEEEEEEccCCC-CCceEEEEEEecCCcccCCCCCCCCCCceeEEcCCcccceEEEEEecCCCCC-
Confidence 34578899999999999999887654 444444444 33322 2346677765443 389999999866655
Q ss_pred ceEEEEEeheeec--------------------ceeeee-eE--------------EEEeecccccccceEEEEEeeccc
Q psy8774 340 VKYKEVSEKIQER--------------------RLQKYG-QY--------------RYFETRDESYIGKRVERMEVRGRK 384 (427)
Q Consensus 340 ~~Y~i~~~~~~~~--------------------~l~~~t-~y--------------~~~~~~~~~~~~~~~~~v~a~~~~ 384 (427)
+.|=|...+.... ..+... +| ....+..|++...|.|-|.+.-..
T Consensus 204 ~kYCvy~~~~~~~~~~~~~~~~~n~C~~~~sr~k~e~v~Ck~~~~~n~~~~~~~~v~tetI~~L~PG~~Yl~dV~~~~~~ 283 (300)
T PF10179_consen 204 IKYCVYRREEHSNYQERSVSRMPNQCLGPESRKKSEKVLCKYFHSPNSSEDPQRAVTTETIKGLKPGTTYLFDVYVNGPS 283 (300)
T ss_pred ceEEEEEEEecCchhhhhhcccCccCCCCCccccceEEEEEEEcCCccccccccccceeecccCCCCcEEEEEEEEecCC
Confidence 6666654321111 000000 11 122456688999999999888766
Q ss_pred CCCCc
Q psy8774 385 GRGRP 389 (427)
Q Consensus 385 g~g~p 389 (427)
|..-|
T Consensus 284 G~sl~ 288 (300)
T PF10179_consen 284 GQSLP 288 (300)
T ss_pred Cceee
Confidence 65544
No 25
>KOG4367|consensus
Probab=97.56 E-value=0.0001 Score=66.86 Aligned_cols=83 Identities=19% Similarity=0.239 Sum_probs=69.3
Q ss_pred eecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeE
Q psy8774 99 FQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS 178 (427)
Q Consensus 99 ~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~ 178 (427)
...+++++|+|..|+ ....+.+||.++.....++.......+..+-+++.+|.-++.|..+|.++|+.|.+++|+.+.
T Consensus 449 ~t~nns~t~~wkqp~--~~~~~~dg~~leld~g~~g~frevy~g~etmctvdglhfns~y~arvka~n~tg~s~ys~tl~ 526 (699)
T KOG4367|consen 449 CTHNNSATLSWKQPP--LSTVPADGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSKTLV 526 (699)
T ss_pred hccCCceEEEeecCC--CCCCCCcceEEEeecCCCCceeEEEecCceeEEecceecchhHHHHHHHhhccCCCcccceeE
Confidence 356789999999774 333578899999988755555556667799999999999999999999999999999999998
Q ss_pred EEccc
Q psy8774 179 LMTAR 183 (427)
Q Consensus 179 ~~t~~ 183 (427)
..|.+
T Consensus 527 lqts~ 531 (699)
T KOG4367|consen 527 LQTSE 531 (699)
T ss_pred eeecc
Confidence 88844
No 26
>KOG4152|consensus
Probab=97.46 E-value=0.0005 Score=64.25 Aligned_cols=77 Identities=30% Similarity=0.493 Sum_probs=61.6
Q ss_pred EccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEc-ccccCCCCCceEEEeeeCcEEEEEeeeCCCC-CCceeEEEEEEEec
Q psy8774 149 FSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT-ARDMVRAPLGVKALATSDQSVEVWWKPVPAG-RGKILGYQIFYTMT 226 (427)
Q Consensus 149 i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t-~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~-~g~i~~Y~I~~~~~ 226 (427)
-..|.+|+.|+|+|.|.|..|.|++|....+.| ..+-|..|..++... +-..+.+.|++|..+ .|.|..|..+....
T Consensus 651 k~~lv~Gq~yrfrV~aIng~G~gp~s~i~~~kTc~pG~P~apS~~ri~k-~~eGi~l~weppt~p~sg~Iieys~ylAi~ 729 (830)
T KOG4152|consen 651 KTSLVTGQAYRFRVTAINGKGPGPASTILKLKTCAPGKPTAPSGARIKK-TIEGISLVWEPPTKPGSGTIIEYSPYLAII 729 (830)
T ss_pred ccccccccceeeeeeeeeccCCCchhhheeeeeccCCCCCCcccccccc-cccceeecccCCCCCCCcceEEeehhhHhh
Confidence 346899999999999999999999999999988 555667777776654 456799999999876 36777787765443
No 27
>KOG4152|consensus
Probab=97.38 E-value=0.0012 Score=61.71 Aligned_cols=118 Identities=24% Similarity=0.319 Sum_probs=75.6
Q ss_pred cCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCC---CCcceEEeecCCCeEEEEecCCCcCCC---ceEEEEEe---
Q psy8774 277 TSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPED---VPLSLRAHDVSTHSMTLSWSPPIKLNP---VKYKEVSE--- 347 (427)
Q Consensus 277 ~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~---~P~~l~~~~~~~~~v~l~W~~P~~~~g---~~Y~i~~~--- 347 (427)
..|.+|+.|.|+|.|.|..|.|++|....+.|-.++ +|..+++. -+-.-+.|.|.+|..++. +.|..+..
T Consensus 652 ~~lv~Gq~yrfrV~aIng~G~gp~s~i~~~kTc~pG~P~apS~~ri~-k~~eGi~l~weppt~p~sg~Iieys~ylAi~t 730 (830)
T KOG4152|consen 652 TSLVTGQAYRFRVTAINGKGPGPASTILKLKTCAPGKPTAPSGARIK-KTIEGISLVWEPPTKPGSGTIIEYSPYLAIIT 730 (830)
T ss_pred cccccccceeeeeeeeeccCCCchhhheeeeeccCCCCCCccccccc-ccccceeecccCCCCCCCcceEEeehhhHhhh
Confidence 478999999999999999999999999999885443 44455544 345578999999987642 35655422
Q ss_pred ---heeecceeeeeeEE-------------EEeecccccccceEEEEEeecccCCCCcc-hhhhH
Q psy8774 348 ---KIQERRLQKYGQYR-------------YFETRDESYIGKRVERMEVRGRKGRGRPK-KRWMD 395 (427)
Q Consensus 348 ---~~~~~~l~~~t~y~-------------~~~~~~~~~~~~~~~~v~a~~~~g~g~p~-~~~~~ 395 (427)
.-...+|--...|+ .....+.......+|||.|.|..|.|+-- ..|++
T Consensus 731 q~~~~~~sql~fmr~ycg~~t~c~vt~g~l~tA~~d~t~~paivfri~aknekGyGpatqvrwlq 795 (830)
T KOG4152|consen 731 QAGATGVSQLPFMRSYCGIITTCVVTSGKLITAVPDITTGPAIVFRIVAKNEKGYGPATQVRWLQ 795 (830)
T ss_pred hhhccCccccceeeeecccceeeEEecccceeeccccccCcceEEEEEecCCCCCCcceEEEecc
Confidence 01111221111221 00111222333459999999999999753 55665
No 28
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=97.35 E-value=0.0017 Score=49.23 Aligned_cols=90 Identities=23% Similarity=0.367 Sum_probs=55.9
Q ss_pred CCCeeeEEEeecCCEEEEEeeCCCC----CCCCc------ceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEE
Q psy8774 90 GPPANISHHFQTPDVVCITWDPPLR----THRNG------QIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYS 159 (427)
Q Consensus 90 ~~p~~~~~~~~~~~~v~v~W~~p~~----~~~~~------~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 159 (427)
+||. +.+ ....+.+.|.+.+|.. ...+. .-..|.|.++.................+.|.+|.|++.|.
T Consensus 4 gPP~-v~v-~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~YC 81 (106)
T PF09294_consen 4 GPPS-VNV-SSCGGSLHVTIKPPMTPLRAGGKNSSLRDIYPSLSYNVSYWKNGSNEKKKEIETKNSSVTLSDLKPGTNYC 81 (106)
T ss_dssp -SSE-EEE-EEETTEEEEEEEESEEEEECSSSEEEHHHHHGG-EEEEEEEETTTSCEEEEEESSSEEEEEES--TTSEEE
T ss_pred cCCE-EEE-EECCCEEEEEEECCCcccccCCCCCcHHHhCCCeEEEEEEEeCCCccceEEEeecCCEEEEeCCCCCCCEE
Confidence 3564 776 5577899999998840 01110 1246999999884442344444557778999999999999
Q ss_pred EEEEEeeC--CCCCCCCCCeEEEc
Q psy8774 160 AEVQAITK--AGPGPWSPKLSLMT 181 (427)
Q Consensus 160 ~~V~a~~~--~g~~~~s~~~~~~t 181 (427)
|+|.+... ...|.+|....+.|
T Consensus 82 v~V~~~~~~~~~~s~~S~~~C~~t 105 (106)
T PF09294_consen 82 VSVQAFSPSQNKNSQPSEPQCITT 105 (106)
T ss_dssp EEEEEEECSSTEEEEEBSEEEEE-
T ss_pred EEEEEEeccCCCcCCCCCCEeEeC
Confidence 99999332 22345666655543
No 29
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=97.21 E-value=0.0018 Score=49.15 Aligned_cols=87 Identities=23% Similarity=0.263 Sum_probs=55.4
Q ss_pred CCCceEEEeeeCcEEEEEeeeCCC-----CCC-------ceeEEEEEEEecccccccccccccccccccccceeEEeeec
Q psy8774 188 APLGVKALATSDQSVEVWWKPVPA-----GRG-------KILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMT 255 (427)
Q Consensus 188 ~p~~l~~~~~~~~si~v~W~~p~~-----~~g-------~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (427)
||. +.+ ...+++|.|.+.+|.. ... ....|.|.|+..... ..
T Consensus 5 PP~-v~v-~~~~~~l~V~i~~P~~~~~~~~~~~~l~~~~~~~~Y~v~~~~~~~~---~~--------------------- 58 (106)
T PF09294_consen 5 PPS-VNV-SSCGGSLHVTIKPPMTPLRAGGKNSSLRDIYPSLSYNVSYWKNGSN---EK--------------------- 58 (106)
T ss_dssp SSE-EEE-EEETTEEEEEEEESEEEEECSSSEEEHHHHHGG-EEEEEEEETTTS---CE---------------------
T ss_pred CCE-EEE-EECCCEEEEEEECCCcccccCCCCCcHHHhCCCeEEEEEEEeCCCc---cc---------------------
Confidence 444 777 5578999999999971 110 125699999987433 11
Q ss_pred cccccccccccccCCCCceeccCCCCCCeEEEEEEEEecc--CCCCCccceEEee
Q psy8774 256 AVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVN--GLGRLSGKVTVKV 308 (427)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~--G~g~~s~~~~~~t 308 (427)
..........++|.+|.|++.|+|+|+|.... ..|.+|.+..+.|
T Consensus 59 --------~~~~~~~~~~~~l~~L~p~t~YCv~V~~~~~~~~~~s~~S~~~C~~t 105 (106)
T PF09294_consen 59 --------KKEIETKNSSVTLSDLKPGTNYCVSVQAFSPSQNKNSQPSEPQCITT 105 (106)
T ss_dssp --------EEEEESSSEEEEEES--TTSEEEEEEEEEECSSTEEEEEBSEEEEE-
T ss_pred --------eEEEeecCCEEEEeCCCCCCCEEEEEEEEeccCCCcCCCCCCEeEeC
Confidence 11233445567899999999999999994332 2667777666655
No 30
>KOG4367|consensus
Probab=97.12 E-value=0.00041 Score=63.10 Aligned_cols=72 Identities=17% Similarity=0.204 Sum_probs=63.1
Q ss_pred ceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccc
Q psy8774 7 EVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETV 78 (427)
Q Consensus 7 ~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~ 78 (427)
.++++|+|..|.....++++|.++....++..+..+....++.+++.+|.-++.|..||.+.|..|.++.+.
T Consensus 452 nns~t~~wkqp~~~~~~~dg~~leld~g~~g~frevy~g~etmctvdglhfns~y~arvka~n~tg~s~ys~ 523 (699)
T KOG4367|consen 452 NNSATLSWKQPPLSTVPADGYILELDDGNGGQFREVYVGKETMCTVDGLHFNSTYNARVKAFNKTGVSPYSK 523 (699)
T ss_pred CCceEEEeecCCCCCCCCcceEEEeecCCCCceeEEEecCceeEEecceecchhHHHHHHHhhccCCCcccc
Confidence 578999999766567789999999988877777777688899999999999999999999999999998664
No 31
>KOG4806|consensus
Probab=96.85 E-value=0.24 Score=44.60 Aligned_cols=244 Identities=14% Similarity=0.096 Sum_probs=118.3
Q ss_pred ecCcceEEEcCCCCCceEEEEEEEEeccCc-Cc-ccceEEeCCCCCCCCCCeeeE------EEeecCCEE-EEEeeCCCC
Q psy8774 44 NSKNMSFLITNLERGVEYEFRIAGQNHIGY-GQ-ETVRYYTTPEGPPTGPPANIS------HHFQTPDVV-CITWDPPLR 114 (427)
Q Consensus 44 ~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~-~~-~~~~~~~t~~~~p~~~p~~~~------~~~~~~~~v-~v~W~~p~~ 114 (427)
......+++.+|.|.+.|.|.|..++..-. +. .......|.+.+. .+|..|. +........ -++...|..
T Consensus 166 ig~~n~~~v~~L~pdt~Y~~dvFvv~~~r~~sTay~~t~~~t~e~~k-Qk~~~Lk~g~l~qv~v~~~kG~kf~~f~~pq~ 244 (454)
T KOG4806|consen 166 IGNKNIFTVSDLKPDTQYYFDVFVVNINRNMSTAYVGTFARTKEEAK-QKTVELKDGKLTQVFVKGRKGAKFLSFKVPQT 244 (454)
T ss_pred cCCccEEEhhhcCCCceEEEEEEEEecCCCcceeeeeeehhhhhhhc-CCceeeccCcEEEEEecccccceEEEecCcch
Confidence 456669999999999999999999875432 21 1111222222221 1111111 111111112 234444433
Q ss_pred CCCCcceeEEEEEEEEcc-------CCCceE-EEeeee-eEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEc---c
Q psy8774 115 THRNGQIVLYNVKFHKKI-------DANNVI-HRNTTQ-TKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMT---A 182 (427)
Q Consensus 115 ~~~~~~i~~Y~v~~~~~~-------~~~~~~-~~~~~~-~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t---~ 182 (427)
...++...-..|.-+... .+.... ...-.. +.+.=..+.++..|.+++...|..- +..--.+...| .
T Consensus 245 ~~~l~qp~mhllh~C~g~vrinl~R~rkel~kS~af~g~~~~~Qfvv~~~~~~~~rf~~~ndde-~~~~v~V~aSt~~t~ 323 (454)
T KOG4806|consen 245 TRSLGQPFMHLLHSCLGEVRINLLRQRKELGKSEAFYGPTYIRQFVVLPGERYLMRFEPSNDDE-ALQKVMVAASTEATF 323 (454)
T ss_pred hhhcCCceeeeeecccccceeehhhchhhhcccccccCceeeeEEEecCCCceEEEEEecCCch-hhheeEeeeeccccc
Confidence 233332222222211110 000000 000111 2122234678889999998887532 22222222333 3
Q ss_pred cccCCCCCceEEEeee--CcEEEEEeeeCCCCCCceeEEEEEEEeccccccccccccccccccccc--ceeEEe-eeccc
Q psy8774 183 RDMVRAPLGVKALATS--DQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSN--IARIFY-TMTAV 257 (427)
Q Consensus 183 ~~~p~~p~~l~~~~~~--~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~ 257 (427)
.+.|.-|.+-.+..+. -++.+|.|.... ..-..|=|+.......+.......+.+.++-.. ..-.+. .+++.
T Consensus 324 ~~~P~LP~dTtVk~v~r~CSsAtIaW~gs~---d~~~kyCIy~~~~~~~e~~v~~~~N~C~g~~~~~~s~~v~c~y~hs~ 400 (454)
T KOG4806|consen 324 RDLPELPQDTTVKNVRRRCSSATIAWNGSP---DEELKYCIYVFNLPQRERSVVDFTNYCMGFVPKRVSQYVYCEYMHSR 400 (454)
T ss_pred CcCCCCCCCceEeeeccccchheeeeccCc---chheeEEEEEecccchhhhhhhhhccccCccccceeEEEeEEEecCh
Confidence 3567888888887765 468999998776 335677777766533111111112333332110 000111 12221
Q ss_pred cccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCC
Q psy8774 258 EDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGL 297 (427)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~ 297 (427)
. ......+..+-+|.||.||+.|.+-|.|.-..|.
T Consensus 401 ~-----~q~~~~~i~teTI~gL~PgssYlldv~a~~~~g~ 435 (454)
T KOG4806|consen 401 E-----RQQSPDNIETETILGLMPGSSYLLDVTANLSMGK 435 (454)
T ss_pred h-----hhcchhhhhhhhhcccccCceEEEEEEEcccCCc
Confidence 0 1112223345678999999999999999876653
No 32
>KOG4228|consensus
Probab=96.70 E-value=0.0081 Score=61.95 Aligned_cols=168 Identities=13% Similarity=0.058 Sum_probs=93.2
Q ss_pred CCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccc-eEE
Q psy8774 3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETV-RYY 81 (427)
Q Consensus 3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~-~~~ 81 (427)
+..+..++.+.|..+. . ....|.|.++..... ...........+....+.+-..|.+ .+.|..|.+.... ..-
T Consensus 34 t~~~~~~~~~~~~~~~--t-~~~~y~v~~~~~~s~-~~~~~~~~~~~~s~~~~~~~~~~~~--~evnt~~~a~~~~~~~~ 107 (1087)
T KOG4228|consen 34 TGSTATSWVQAELLGS--T-WPNYYQVIFKALSSG-YGYIDVDLTTRLSYPCLSPPSFLEL--VEVNTIGRAPFQCPVAP 107 (1087)
T ss_pred ccccccceeehhhccC--C-ChhhhheeeeEeccC-cceeeccceeecccCCCCCcchhhh--hhcccccccccccccCC
Confidence 3445566666776664 2 556677777765544 3222222333355555666666665 5555555554321 122
Q ss_pred eCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEE
Q psy8774 82 TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAE 161 (427)
Q Consensus 82 ~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~ 161 (427)
++....+...+............+.++|..+.. ..+
T Consensus 108 rt~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~--~~~------------------------------------------ 143 (1087)
T KOG4228|consen 108 RTGEQATLSLQRDVQALMLSAATAHVNWRRFSA--TVG------------------------------------------ 143 (1087)
T ss_pred ccccccccccccchhhhhhhhhhhccCcccccc--ccc------------------------------------------
Confidence 222233333343444344444455555555420 000
Q ss_pred EEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEec
Q psy8774 162 VQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMT 226 (427)
Q Consensus 162 V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~ 226 (427)
+.+....|.++.+..+.+.+....|..|. .....++++++|.++. ...+..|++.+...
T Consensus 144 ~~~~~~~~~~~~~t~i~i~~~~~~p~~~~----~~~~~~~it~~w~~~~--~~~~~~ykl~~~~~ 202 (1087)
T KOG4228|consen 144 PLAIASPGLGPPSTYIQITTNANSPIQPG----EEEEYTTITGSWSPPH--AVSLDTYKLLHLDP 202 (1087)
T ss_pred ccccCCcccCCCCceEEEeccCCCCCCCC----cceEEEEEEecCCCCC--cccchhhhhhhcCC
Confidence 55666667776666777777665554444 5556789999998886 35788888877665
No 33
>PF01108 Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH_E 1FG9_D 1JRH_I 3DGC_R 3DLQ_R 1LQS_R 1Y6M_R 1J7V_R ....
Probab=96.67 E-value=0.018 Score=43.69 Aligned_cols=78 Identities=21% Similarity=0.238 Sum_probs=55.5
Q ss_pred CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEE----eeeeeEEEEccCC--CCcEEEEE
Q psy8774 88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHR----NTTQTKAVFSNLE--EGIEYSAE 161 (427)
Q Consensus 88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~----~~~~~~~~i~~L~--p~t~Y~~~ 161 (427)
...+|.++++.+. .-...|.|+++. . ...-..|.|+|+.. ....+... ....+.+.|++.. +...|.++
T Consensus 21 ~lp~P~nv~~~s~-nf~~iL~W~~~~--~-~~~~~~ytVq~~~~-~~~~W~~v~~C~~i~~~~Cdlt~~~~~~~~~Y~~r 95 (107)
T PF01108_consen 21 SLPAPQNVTVDSV-NFKHILRWDPGP--G-SPPNVTYTVQYKKY-GSSSWKDVPGCQNITETSCDLTDETSDPSESYYAR 95 (107)
T ss_dssp SGSSCEEEEEEEE-TTEEEEEEEEST--T-SSSTEEEEEEEEES-STSCEEEECCEEEESSSEEECTTCCTTTTSEEEEE
T ss_pred cCCCCCeeEEEEE-CCceEEEeCCCC--C-CCCCeEEEEEEEec-CCcceeeccceecccccceeCcchhhcCcCCEEEE
Confidence 3347899998876 456899999963 2 23556899999943 24444443 3557899998844 79999999
Q ss_pred EEEeeCCCC
Q psy8774 162 VQAITKAGP 170 (427)
Q Consensus 162 V~a~~~~g~ 170 (427)
|+|..+...
T Consensus 96 V~A~~~~~~ 104 (107)
T PF01108_consen 96 VRAEVGNQT 104 (107)
T ss_dssp EEEEETTEE
T ss_pred EEEEeCCcc
Confidence 999965433
No 34
>PF01108 Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH_E 1FG9_D 1JRH_I 3DGC_R 3DLQ_R 1LQS_R 1Y6M_R 1J7V_R ....
Probab=96.55 E-value=0.025 Score=42.94 Aligned_cols=84 Identities=19% Similarity=0.230 Sum_probs=54.5
Q ss_pred ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774 184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW 263 (427)
Q Consensus 184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (427)
+..++|.++++... +-...|+|+++.. ...-..|.|+|... ....|....
T Consensus 20 ~~lp~P~nv~~~s~-nf~~iL~W~~~~~-~~~~~~ytVq~~~~---~~~~W~~v~------------------------- 69 (107)
T PF01108_consen 20 ASLPAPQNVTVDSV-NFKHILRWDPGPG-SPPNVTYTVQYKKY---GSSSWKDVP------------------------- 69 (107)
T ss_dssp SSGSSCEEEEEEEE-TTEEEEEEEESTT-SSSTEEEEEEEEES---STSCEEEEC-------------------------
T ss_pred ccCCCCCeeEEEEE-CCceEEEeCCCCC-CCCCeEEEEEEEec---CCcceeecc-------------------------
Confidence 34478999999886 4568899999652 24668899999933 333442110
Q ss_pred cccccCCCCceeccCCC--CCCeEEEEEEEEeccCCC
Q psy8774 264 SQKSVPLTESAELTSLE--KFTEYAVAVAARTVNGLG 298 (427)
Q Consensus 264 ~~~~~~~~~~~~l~~L~--p~t~Y~~~V~a~~~~G~g 298 (427)
.......++..|++.. +...|.++|+|..+...|
T Consensus 70 -~C~~i~~~~Cdlt~~~~~~~~~Y~~rV~A~~~~~~S 105 (107)
T PF01108_consen 70 -GCQNITETSCDLTDETSDPSESYYARVRAEVGNQTS 105 (107)
T ss_dssp -CEEEESSSEEECTTCCTTTTSEEEEEEEEEETTEEE
T ss_pred -ceecccccceeCcchhhcCcCCEEEEEEEEeCCccC
Confidence 0122234566666533 678999999999776443
No 35
>COG4733 Phage-related protein, tail component [Function unknown]
Probab=96.09 E-value=0.13 Score=51.67 Aligned_cols=142 Identities=12% Similarity=0.041 Sum_probs=78.1
Q ss_pred EEEEEEEccCCCceEEEe-eeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCC-CeEEEc--ccccCCCCCceEEEeeeC
Q psy8774 124 YNVKFHKKIDANNVIHRN-TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSP-KLSLMT--ARDMVRAPLGVKALATSD 199 (427)
Q Consensus 124 Y~v~~~~~~~~~~~~~~~-~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~-~~~~~t--~~~~p~~p~~l~~~~~~~ 199 (427)
+.+.|....++ .+.... .....+.+.+|.+ .+|.++|+|.|..|....-. ...+.. ...||..+.-+..... .
T Consensus 639 ~~~a~~a~~~~-~~vta~rt~~~~~~~~gi~~-GqY~i~VrAiN~~g~~~~~a~s~~f~i~g~~~Ppp~~~t~~a~~i-t 715 (952)
T COG4733 639 AAWAYEAGWDG-NWITAPRTSAAGFDVEGIPA-GQYAIRVRAINVFEPNSPDATAYEFALNGKKVPPPKAMIYDAVII-T 715 (952)
T ss_pred HHHHhhcccCC-ceEecccccccceeecCcCc-cceEEEEEEeeccCCCCCCcceeEEEecCCCCCCCcccccceEEE-E
Confidence 44555544333 333332 5588899999998 68999999999988653322 344444 3344433333333332 2
Q ss_pred cEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCceec--c
Q psy8774 200 QSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAEL--T 277 (427)
Q Consensus 200 ~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~ 277 (427)
-.+.+.|-.|. ..-.+..-.|++......+. .....+....-.+ .
T Consensus 716 ~~~~l~v~dPt-~~~d~~~sei~~s~~~d~~~--------------------------------~Ar~LG~~~~~~~~~~ 762 (952)
T COG4733 716 LVIRLVVGDPT-GAVDITSTEIRSAVIADGNF--------------------------------QARSLGNLNYPGLFSV 762 (952)
T ss_pred eeeeEEEecCC-cceEEeeeeeeeeccccchh--------------------------------HHhhhhcccccccccc
Confidence 35678887776 11123333333333211111 0011111111111 5
Q ss_pred CCCCCCeEEEEEEEEeccCCCCCc
Q psy8774 278 SLEKFTEYAVAVAARTVNGLGRLS 301 (427)
Q Consensus 278 ~L~p~t~Y~~~V~a~~~~G~g~~s 301 (427)
+|+++..|.|+++++|..|...+-
T Consensus 763 ~i~~g~~~~F~~R~Vn~vG~~~~~ 786 (952)
T COG4733 763 GIQAGLTFWFRNRNVDLVGNNDKW 786 (952)
T ss_pred CcCCCceEEEEeeecccccccccc
Confidence 899999999999999998854433
No 36
>COG4733 Phage-related protein, tail component [Function unknown]
Probab=95.64 E-value=0.07 Score=53.53 Aligned_cols=140 Identities=10% Similarity=0.064 Sum_probs=78.2
Q ss_pred eEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcc-c-ceEE-eCCCCCCCCCCeeeEEEeecCC
Q psy8774 27 YRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQE-T-VRYY-TTPEGPPTGPPANISHHFQTPD 103 (427)
Q Consensus 27 Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~-~-~~~~-~t~~~~p~~~p~~~~~~~~~~~ 103 (427)
+.+.|....+..|..........|.+.+|.+| +|.++|+|.|..|.... . +..+ ......|+..+..+.... ..-
T Consensus 639 ~~~a~~a~~~~~~vta~rt~~~~~~~~gi~~G-qY~i~VrAiN~~g~~~~~a~s~~f~i~g~~~Ppp~~~t~~a~~-it~ 716 (952)
T COG4733 639 AAWAYEAGWDGNWITAPRTSAAGFDVEGIPAG-QYAIRVRAINVFEPNSPDATAYEFALNGKKVPPPKAMIYDAVI-ITL 716 (952)
T ss_pred HHHHhhcccCCceEecccccccceeecCcCcc-ceEEEEEEeeccCCCCCCcceeEEEecCCCCCCCcccccceEE-EEe
Confidence 44455444444444443667889999999995 79999999999986652 2 2222 223334432222222222 223
Q ss_pred EEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeee--eeEEEEccCCCCcEEEEEEEEeeCCCCC
Q psy8774 104 VVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTT--QTKAVFSNLEEGIEYSAEVQAITKAGPG 171 (427)
Q Consensus 104 ~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~--~~~~~i~~L~p~t~Y~~~V~a~~~~g~~ 171 (427)
.+.+.|-.|. ..-.+..-.+++....+.......... .....-.+|.++..|.|+++++|..|..
T Consensus 717 ~~~l~v~dPt---~~~d~~~sei~~s~~~d~~~~Ar~LG~~~~~~~~~~~i~~g~~~~F~~R~Vn~vG~~ 783 (952)
T COG4733 717 VIRLVVGDPT---GAVDITSTEIRSAVIADGNFQARSLGNLNYPGLFSVGIQAGLTFWFRNRNVDLVGNN 783 (952)
T ss_pred eeeEEEecCC---cceEEeeeeeeeeccccchhHHhhhhccccccccccCcCCCceEEEEeeeccccccc
Confidence 6778888772 112333333333333222221111111 1112226899999999999999998875
No 37
>KOG0613|consensus
Probab=95.36 E-value=0.45 Score=50.42 Aligned_cols=343 Identities=11% Similarity=0.050 Sum_probs=170.2
Q ss_pred EEEeeCCC-CCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccc-----------
Q psy8774 11 ELVWSQPT-QTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETV----------- 78 (427)
Q Consensus 11 ~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~----------- 78 (427)
.++|..+. +.......|.+.........|.........-....++.+...|.++|.+.+..+....++
T Consensus 9 ~lr~~r~~~~~~~~~t~~~~~~~s~l~~~r~~~s~~~~~~v~~~~e~~~a~~~~rv~~~~r~~~~~~s~~~~~~~~~pa~ 88 (1205)
T KOG0613|consen 9 CLRPDRPGKLVFEAKTTYTVDKLSILPDVRDSGSFIPDYGVLQVKEGETALLTGRVDGEPRPELIWGSSGIEIDMMVPAT 88 (1205)
T ss_pred ccCcccCCCcccccCCCCCccccccChhhccCCCccccCcceeccCCcceeeeeeeccccccCCCCcccccchhhccccc
Confidence 57888776 333455778887665544444333323333455567888889999998887655322111
Q ss_pred ----e--------------------------------E-----EeCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCC
Q psy8774 79 ----R--------------------------------Y-----YTTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHR 117 (427)
Q Consensus 79 ----~--------------------------------~-----~~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~ 117 (427)
. - .......|..+|.+-.........+...|..+.+ +.
T Consensus 89 ~~~~~~~~~~~l~~t~~v~~~~ad~~~~~~~e~~~~i~~~~~~~v~~~e~pd~~~~~~~sv~~~~~~v~~~~~~~~~-d~ 167 (1205)
T KOG0613|consen 89 EYSLVTHMNTELGSTWAVGDEYADDRPIHLVERKALIDVVPSPEVCQQEKPDPPPSNRESVLVHRARVLPAWRPPRE-DG 167 (1205)
T ss_pred ccccccccccccccccccccccccccccccccccccCCccccchhhhhcCCCCCCCCccceeecCceecccccCCcc-Cc
Confidence 0 0 0000011222333333344566778889998863 44
Q ss_pred CcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEee
Q psy8774 118 NGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALAT 197 (427)
Q Consensus 118 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~ 197 (427)
.....+|.|..+..+..............-.+.... |.+.|+++-..|....-... +. ...++.+...+.....
T Consensus 168 ~~k~~~~iie~~~~g~s~~~~~l~~~~~~s~~~~a~----~e~~v~~v~s~gqp~~~~~~-~~-~g~~i~~~~~~~~s~t 241 (1205)
T KOG0613|consen 168 GRKREEYIIERRQAGRSPWLKRLTQPTDDSTDTDAH----YESRVRAVVSAGQPEPLERW-EI-LGELIAPGSAPSMSVT 241 (1205)
T ss_pred cceeecceEEEEeccCCCcccccccccCCcceeccc----cceeEEEEEecCCCccchhh-hh-cccccCCCCccccccc
Confidence 447788999988774333322222222222233232 56666666555554211111 11 1122233333344333
Q ss_pred e---CcEEEEEeeeCCCCC-CceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccccccCCCCc
Q psy8774 198 S---DQSVEVWWKPVPAGR-GKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTES 273 (427)
Q Consensus 198 ~---~~si~v~W~~p~~~~-g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (427)
. ...+.+.|..+..+. -.+.+|.+......+ ...+.. .........+
T Consensus 242 ~e~s~~~i~~~l~~~~G~~~~~~~~~l~e~~~~~~--~~t~~i---------------------------~~~~~~~~~s 292 (1205)
T KOG0613|consen 242 LEASDRKIQLTLRAPRGPYSAHILGYLIEQRKHKG--GNTKTI---------------------------QNDGPEPELS 292 (1205)
T ss_pred cchhheeeeEEeecCCCchHHHHhcchhhhcccCC--Cccccc---------------------------cccCCccccc
Confidence 3 345666676665221 145556555444211 111100 1122233445
Q ss_pred eeccCCCCCCeEEEEEEEEeccCCCCCccce---EEeec---CCCCCcceEEeecCCCeEEEEecCCCc--CCCc-eEEE
Q psy8774 274 AELTSLEKFTEYAVAVAARTVNGLGRLSGKV---TVKVK---PEDVPLSLRAHDVSTHSMTLSWSPPIK--LNPV-KYKE 344 (427)
Q Consensus 274 ~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~---~~~t~---~~~~P~~l~~~~~~~~~v~l~W~~P~~--~~g~-~Y~i 344 (427)
++.-.-..+..|.+.|...-..|.+.+-... .+.+. +...+.++.+.....+.+.+.|.-+.. +++. .|++
T Consensus 293 ~t~~~~~~~~q~~~~v~~~~~i~~~~~~p~~~~~aaa~~~~~~v~~~~~~~v~a~d~~~v~m~~~~~~~~~p~~~~~~~~ 372 (1205)
T KOG0613|consen 293 WTVADKRQGCQDRFKVTEEAPIGKGKPGPESLQAAAARPPEVPVGLVRNLSVTARDNTLVEMPTALSGTQKPDEAQGYHG 372 (1205)
T ss_pred eeeecccCCcccceeeeEEeeccccccCchhhhhhccCCccccccccccceeccccCcceeecccccCCcCCchheeecc
Confidence 5555556777888888888777755544322 22221 223345666666788999999976654 3322 5554
Q ss_pred EEeheeeccee--ee-eeEEEE-eecccccccceEEEEEeecccCCCCc
Q psy8774 345 VSEKIQERRLQ--KY-GQYRYF-ETRDESYIGKRVERMEVRGRKGRGRP 389 (427)
Q Consensus 345 ~~~~~~~~~l~--~~-t~y~~~-~~~~~~~~~~~~~~v~a~~~~g~g~p 389 (427)
.-......+.. +. +.+... ...+......+..++.|.|..|.-.+
T Consensus 373 ~~~~~~~~~~~~~~~~~~ts~~~~~~~~~~~e~~~~~~~a~n~~g~~~~ 421 (1205)
T KOG0613|consen 373 EEVSSESLGALPCPVGTVTSHTYTIKDAGPGEGYFTRVPAVNKGGTEQT 421 (1205)
T ss_pred cccccccccccccccccccCcchhhhhcCcccccccccceeccCCcccc
Confidence 42211111111 11 111111 22333444556677788877776654
No 38
>KOG0613|consensus
Probab=95.23 E-value=0.32 Score=51.46 Aligned_cols=261 Identities=13% Similarity=0.059 Sum_probs=145.3
Q ss_pred ceEEEEEeeCCC-CCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEEeCC-
Q psy8774 7 EVTIELVWSQPT-QTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYYTTP- 84 (427)
Q Consensus 7 ~~sv~l~W~~p~-~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~~t~- 84 (427)
...+...|..+. +....+.+|.|+.+..++..|..........-.+..+. |.++|+.+...|...+........
T Consensus 153 ~~~v~~~~~~~~~d~~~k~~~~iie~~~~g~s~~~~~l~~~~~~s~~~~a~----~e~~v~~v~s~gqp~~~~~~~~~g~ 228 (1205)
T KOG0613|consen 153 RARVLPAWRPPREDGGRKREEYIIERRQAGRSPWLKRLTQPTDDSTDTDAH----YESRVRAVVSAGQPEPLERWEILGE 228 (1205)
T ss_pred CceecccccCCccCccceeecceEEEEeccCCCcccccccccCCcceeccc----cceeEEEEEecCCCccchhhhhccc
Confidence 345667898887 44556789999999888888877763333333333443 667777776666554332211111
Q ss_pred CCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe---eeeeEEEEccCCCCcEEEEE
Q psy8774 85 EGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN---TTQTKAVFSNLEEGIEYSAE 161 (427)
Q Consensus 85 ~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~---~~~~~~~i~~L~p~t~Y~~~ 161 (427)
...|...|.--.........+.+.|..+.. .....+.+|.++.....++..+.... ....+.+...-.++.+|.++
T Consensus 229 ~i~~~~~~~~s~t~e~s~~~i~~~l~~~~G-~~~~~~~~~l~e~~~~~~~~t~~i~~~~~~~~~s~t~~~~~~~~q~~~~ 307 (1205)
T KOG0613|consen 229 LIAPGSAPSMSVTLEASDRKIQLTLRAPRG-PYSAHILGYLIEQRKHKGGNTKTIQNDGPEPELSWTVADKRQGCQDRFK 307 (1205)
T ss_pred ccCCCCccccccccchhheeeeEEeecCCC-chHHHHhcchhhhcccCCCccccccccCCccccceeeecccCCccccee
Confidence 112223332222223344567778876641 11124556666554421122221111 22445555555788899999
Q ss_pred EEEeeCCCCCCCCCCe---EEEc-ccccCCCCCceEEEeeeCcEEEEEeeeCCCCCC-ceeEEEEEEEeccccccccccc
Q psy8774 162 VQAITKAGPGPWSPKL---SLMT-ARDMVRAPLGVKALATSDQSVEVWWKPVPAGRG-KILGYQIFYTMTAVEDLDEWSQ 236 (427)
Q Consensus 162 V~a~~~~g~~~~s~~~---~~~t-~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~~~~~~~~~~~ 236 (427)
|...-..|.+.+-... .+.+ ...+..-+.++.+.....+.+.+.|......-. ...+|.+.-... ....+.
T Consensus 308 v~~~~~i~~~~~~p~~~~~aaa~~~~~~v~~~~~~~v~a~d~~~v~m~~~~~~~~~p~~~~~~~~~~~~~---~~~~~~- 383 (1205)
T KOG0613|consen 308 VTEEAPIGKGKPGPESLQAAAARPPEVPVGLVRNLSVTARDNTLVEMPTALSGTQKPDEAQGYHGEEVSS---ESLGAL- 383 (1205)
T ss_pred eeEEeeccccccCchhhhhhccCCccccccccccceeccccCcceeecccccCCcCCchheeeccccccc---cccccc-
Confidence 9888777766432222 2222 333445666777777778889999976653222 244444433222 111110
Q ss_pred ccccccccccceeEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCcc
Q psy8774 237 KSIPLTESSNIARIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSG 302 (427)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~ 302 (427)
. ........+.+.+.++.++..|..++.|.|..|......
T Consensus 384 -~-------------------------~~~~~~ts~~~~~~~~~~~e~~~~~~~a~n~~g~~~~~~ 423 (1205)
T KOG0613|consen 384 -P-------------------------CPVGTVTSHTYTIKDAGPGEGYFTRVPAVNKGGTEQTIA 423 (1205)
T ss_pred -c-------------------------cccccccCcchhhhhcCcccccccccceeccCCcccccc
Confidence 0 112233455677889999999999999999988655443
No 39
>PF09067 EpoR_lig-bind: Erythropoietin receptor, ligand binding; InterPro: IPR015152 Members of this entry include the growth hormone and erythropoietin receptors. The latter interacts with erythropoietin (EPO), with subsequent initiation of the downstream chain of events associated with binding of EPO to the receptor, including EPO-induced erythroblast proliferation and differentiation through induction of the JAK2/STAT5 signalling cascade. The domain adopts a secondary structure composed of a short amino-terminal helix, followed by two beta-sandwich regions []. ; PDB: 3NCB_B 3NCF_B 3NCE_B 3N0P_B 3NCC_B 1BP3_B 3N06_B 3MZG_B 3D48_R 1F6F_C ....
Probab=94.90 E-value=0.37 Score=36.11 Aligned_cols=78 Identities=17% Similarity=0.270 Sum_probs=54.8
Q ss_pred CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe----eeeeE-----EEEc--cCCCCc
Q psy8774 88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN----TTQTK-----AVFS--NLEEGI 156 (427)
Q Consensus 88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~----~~~~~-----~~i~--~L~p~t 156 (427)
|++.|.++.+...+...+++.|++.. ..+ ....|.+.|.... ..+..-. ...++ +.+. +..-.+
T Consensus 7 ~p~~P~~~~C~S~~~etftC~W~~g~--~~~-l~~~y~L~Y~~~~--~~~~eCp~~~~~~~ns~~~~~C~F~~~~t~lf~ 81 (104)
T PF09067_consen 7 PPEKPENLKCFSREMETFTCFWEPGS--EGN-LPTNYTLFYKKEG--EEWKECPDYSTSGPNSTVRHICYFPKSDTSLFV 81 (104)
T ss_dssp HCCCCEEEEEEBSSSS-EEEEEEEES--SST-STCEEEEEEEETT--SEEEEESESSTTETTEEEEEEEEE-CCGCSSSS
T ss_pred CCCCCccCccCCCCCCcEEEEeeCCC--CCC-CCCcEEEEEEeCC--CCCccCCCeEecCCCCceeEEEEcCCCCeEEEE
Confidence 45679999999999999999999884 332 2334999999873 2222211 12334 5565 788999
Q ss_pred EEEEEEEEeeCCCC
Q psy8774 157 EYSAEVQAITKAGP 170 (427)
Q Consensus 157 ~Y~~~V~a~~~~g~ 170 (427)
.|.|+|.|.+..|.
T Consensus 82 ~y~i~V~a~~~~~~ 95 (104)
T PF09067_consen 82 PYCIQVEATNALGS 95 (104)
T ss_dssp EEEEEEEEEETTEE
T ss_pred EEEEEEEeccCCCc
Confidence 99999999988765
No 40
>PF09067 EpoR_lig-bind: Erythropoietin receptor, ligand binding; InterPro: IPR015152 Members of this entry include the growth hormone and erythropoietin receptors. The latter interacts with erythropoietin (EPO), with subsequent initiation of the downstream chain of events associated with binding of EPO to the receptor, including EPO-induced erythroblast proliferation and differentiation through induction of the JAK2/STAT5 signalling cascade. The domain adopts a secondary structure composed of a short amino-terminal helix, followed by two beta-sandwich regions []. ; PDB: 3NCB_B 3NCF_B 3NCE_B 3N0P_B 3NCC_B 1BP3_B 3N06_B 3MZG_B 3D48_R 1F6F_C ....
Probab=94.53 E-value=0.32 Score=36.44 Aligned_cols=85 Identities=20% Similarity=0.345 Sum_probs=55.8
Q ss_pred ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774 184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW 263 (427)
Q Consensus 184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (427)
.+|..|.++.+...+...++.-|++....+.. ..|.+.|.... ..+..+...
T Consensus 6 ~~p~~P~~~~C~S~~~etftC~W~~g~~~~l~-~~y~L~Y~~~~----~~~~eCp~~----------------------- 57 (104)
T PF09067_consen 6 LPPEKPENLKCFSREMETFTCFWEPGSEGNLP-TNYTLFYKKEG----EEWKECPDY----------------------- 57 (104)
T ss_dssp HHCCCCEEEEEEBSSSS-EEEEEEEESSSTST-CEEEEEEEETT----SEEEEESES-----------------------
T ss_pred cCCCCCccCccCCCCCCcEEEEeeCCCCCCCC-CcEEEEEEeCC----CCCccCCCe-----------------------
Confidence 46788999999999999999999999855433 44999999873 222222111
Q ss_pred cccccCCC-----CceeccCCCCCCeEEEEEEEEeccCC
Q psy8774 264 SQKSVPLT-----ESAELTSLEKFTEYAVAVAARTVNGL 297 (427)
Q Consensus 264 ~~~~~~~~-----~~~~l~~L~p~t~Y~~~V~a~~~~G~ 297 (427)
.....+. ..|--.+..-.+.|.|+|.|.+..|.
T Consensus 58 -~~~~~ns~~~~~C~F~~~~t~lf~~y~i~V~a~~~~~~ 95 (104)
T PF09067_consen 58 -STSGPNSTVRHICYFPKSDTSLFVPYCIQVEATNALGS 95 (104)
T ss_dssp -STTETTEEEEEEEEE-CCGCSSSSEEEEEEEEEETTEE
T ss_pred -EecCCCCceeEEEEcCCCCeEEEEEEEEEEEeccCCCc
Confidence 0111112 23333467778999999999998753
No 41
>PLN02533 probable purple acid phosphatase
Probab=92.29 E-value=0.94 Score=43.70 Aligned_cols=99 Identities=11% Similarity=0.083 Sum_probs=55.5
Q ss_pred ccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccc
Q psy8774 184 DMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEW 263 (427)
Q Consensus 184 ~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (427)
..+..|..+++.-.+.+++.|+|.-.... . -.|.|...... .... .... ... |. ..
T Consensus 39 ~~~~~P~qvhls~~~~~~m~V~W~T~~~~-~----~~V~yG~~~~~-l~~~-a~g~--------~~~-~~-----~~--- 94 (427)
T PLN02533 39 DDPTHPDQVHISLVGPDKMRISWITQDSI-P----PSVVYGTVSGK-YEGS-ANGT--------SSS-YH-----YL--- 94 (427)
T ss_pred CCCCCCceEEEEEcCCCeEEEEEECCCCC-C----CEEEEecCCCC-Ccce-EEEE--------EEE-Ee-----cc---
Confidence 34578889999888889999999877532 1 22555443110 0000 0000 000 00 00
Q ss_pred cccccCCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCC
Q psy8774 264 SQKSVPLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPED 312 (427)
Q Consensus 264 ~~~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~ 312 (427)
.....+-...+.|++|+|++.|.++|- ....+....|+|.|..
T Consensus 95 ~~~~~g~iH~v~l~~L~p~T~Y~Yrvg------~~~~s~~~~F~T~p~~ 137 (427)
T PLN02533 95 LIYRSGQINDVVIGPLKPNTVYYYKCG------GPSSTQEFSFRTPPSK 137 (427)
T ss_pred ccccCCeEEEEEeCCCCCCCEEEEEEC------CCCCccceEEECCCCC
Confidence 001123345678999999999999983 1233666788886543
No 42
>PLN02533 probable purple acid phosphatase
Probab=90.83 E-value=7.5 Score=37.60 Aligned_cols=82 Identities=13% Similarity=0.131 Sum_probs=51.0
Q ss_pred CCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe-------------eeeeEEEEccCCC
Q psy8774 88 PTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN-------------TTQTKAVFSNLEE 154 (427)
Q Consensus 88 p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-------------~~~~~~~i~~L~p 154 (427)
.+..|..+++...+.+++.|+|..... . .. .|+|....+.-...... .-...+.|++|+|
T Consensus 40 ~~~~P~qvhls~~~~~~m~V~W~T~~~--~-~~----~V~yG~~~~~l~~~a~g~~~~~~~~~~~~~g~iH~v~l~~L~p 112 (427)
T PLN02533 40 DPTHPDQVHISLVGPDKMRISWITQDS--I-PP----SVVYGTVSGKYEGSANGTSSSYHYLLIYRSGQINDVVIGPLKP 112 (427)
T ss_pred CCCCCceEEEEEcCCCeEEEEEECCCC--C-CC----EEEEecCCCCCcceEEEEEEEEeccccccCCeEEEEEeCCCCC
Confidence 445688999888789999999998742 1 12 24554432111111000 1134578999999
Q ss_pred CcEEEEEEEEeeCCCCCCCCCCeEEEcc
Q psy8774 155 GIEYSAEVQAITKAGPGPWSPKLSLMTA 182 (427)
Q Consensus 155 ~t~Y~~~V~a~~~~g~~~~s~~~~~~t~ 182 (427)
+|.|.++|- ....|....|+|.
T Consensus 113 ~T~Y~Yrvg------~~~~s~~~~F~T~ 134 (427)
T PLN02533 113 NTVYYYKCG------GPSSTQEFSFRTP 134 (427)
T ss_pred CCEEEEEEC------CCCCccceEEECC
Confidence 999999983 1224666778874
No 43
>PF09240 IL6Ra-bind: Interleukin-6 receptor alpha chain, binding; InterPro: IPR015321 Members of this entry adopt a structure consisting of an immunoglobulin-like beta-sandwich, with seven strands in two beta-sheets, in a Greek-key topology. They are required for binding to the cytokine Interleukin-6 []. ; PDB: 1N26_A 1P9M_C 3LB6_C 1PVH_A 3L5H_A 1BQU_A 1I1R_A 3QT2_B 3BPN_C 3BPO_C ....
Probab=90.30 E-value=5.9 Score=29.31 Aligned_cols=77 Identities=18% Similarity=0.203 Sum_probs=52.3
Q ss_pred CCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe-----eeeeEEEEccCCC----CcEEEEE
Q psy8774 91 PPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN-----TTQTKAVFSNLEE----GIEYSAE 161 (427)
Q Consensus 91 ~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~-----~~~~~~~i~~L~p----~t~Y~~~ 161 (427)
+|++|.+...+...+.++|.+.. .. ..-..|.+.|+............ .....+.+..... ...|.|.
T Consensus 1 ~~~nlsC~~~~~~~m~CtW~~g~--~~-~~~t~y~L~~~~~~~~~~~eC~~y~~~~~~~~gC~~~~~~~~~~~~~~~~v~ 77 (99)
T PF09240_consen 1 KPQNLSCFIYNLEYMNCTWEPGK--EA-PPDTQYTLYYWYSPLEEEKECPHYSKDSGTRIGCQFPVSEIDSSEFSQYNVC 77 (99)
T ss_dssp S-EEEEEEEETTTEEEEEEECCT--TC-STTEEEEEEEEETTSSSEEEESEEEESTSSEEEEEEESCTT-TTTTSEEEEE
T ss_pred CCeeCEEEEECCEEEEEEECCCC--CC-CCcccEEEEEEcCCCCccccCCCccccCCceeEEEecCCCccccccceEEEE
Confidence 36799999889999999999763 21 24458999999874333333222 1245667766555 3589999
Q ss_pred EEEeeCCCC
Q psy8774 162 VQAITKAGP 170 (427)
Q Consensus 162 V~a~~~~g~ 170 (427)
|.+.+..|.
T Consensus 78 V~~ss~~~~ 86 (99)
T PF09240_consen 78 VNGSSSAGS 86 (99)
T ss_dssp EEEEETTEE
T ss_pred EEeccCCCc
Confidence 999887665
No 44
>KOG4806|consensus
Probab=90.19 E-value=15 Score=33.66 Aligned_cols=111 Identities=14% Similarity=0.122 Sum_probs=63.6
Q ss_pred CCCCCCeEEEEEEEEeccCCCCCccceEEeec-----CCCCCcceEEeec--CCCeEEEEecCCCcCCCceEEEEEehee
Q psy8774 278 SLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK-----PEDVPLSLRAHDV--STHSMTLSWSPPIKLNPVKYKEVSEKIQ 350 (427)
Q Consensus 278 ~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~-----~~~~P~~l~~~~~--~~~~v~l~W~~P~~~~g~~Y~i~~~~~~ 350 (427)
.+.++..|.+++...|.. ++.....+-.+|. -+..|.+-++..+ .=.+.++.|....+. -+.|=|+..+..
T Consensus 290 vv~~~~~~~~rf~~~ndd-e~~~~v~V~aSt~~t~~~~P~LP~dTtVk~v~r~CSsAtIaW~gs~d~-~~kyCIy~~~~~ 367 (454)
T KOG4806|consen 290 VVLPGERYLMRFEPSNDD-EALQKVMVAASTEATFRDLPELPQDTTVKNVRRRCSSATIAWNGSPDE-ELKYCIYVFNLP 367 (454)
T ss_pred EecCCCceEEEEEecCCc-hhhheeEeeeecccccCcCCCCCCCceEeeeccccchheeeeccCcch-heeEEEEEeccc
Confidence 567888999999998876 4443222333331 2345666666655 446889999865543 346666543211
Q ss_pred ec------------c--eeeeeeEEEE------------------eecccccccceEEEEEeecccCCCCcc
Q psy8774 351 ER------------R--LQKYGQYRYF------------------ETRDESYIGKRVERMEVRGRKGRGRPK 390 (427)
Q Consensus 351 ~~------------~--l~~~t~y~~~------------------~~~~~~~~~~~~~~v~a~~~~g~g~p~ 390 (427)
.. + ......|.++ .+-.|++..+|..-|.|.-..|..-|.
T Consensus 368 ~~e~~v~~~~N~C~g~~~~~~s~~v~c~y~hs~~~q~~~~~i~teTI~gL~PgssYlldv~a~~~~g~~lpy 439 (454)
T KOG4806|consen 368 QRERSVVDFTNYCMGFVPKRVSQYVYCEYMHSRERQQSPDNIETETILGLMPGSSYLLDVTANLSMGKPLPY 439 (454)
T ss_pred chhhhhhhhhccccCccccceeEEEeEEEecChhhhcchhhhhhhhhcccccCceEEEEEEEcccCCccccc
Confidence 10 0 0011233222 122367888899888888777666554
No 45
>TIGR00868 hCaCC calcium-activated chloride channel protein 1. distributions. found a row in 1A13.INFO that was not parsed out
Probab=89.89 E-value=29 Score=36.65 Aligned_cols=41 Identities=12% Similarity=0.119 Sum_probs=31.0
Q ss_pred cCCCCCceEEEeeeCcEEEEEeeeCCC--CCCceeEEEEEEEec
Q psy8774 185 MVRAPLGVKALATSDQSVEVWWKPVPA--GRGKILGYQIFYTMT 226 (427)
Q Consensus 185 ~p~~p~~l~~~~~~~~si~v~W~~p~~--~~g~i~~Y~I~~~~~ 226 (427)
||...++|++.. ....|.|+|+.|-. +.|....|.|.+...
T Consensus 755 PP~rItDL~~~~-~~~~v~LsWTAPG~d~D~G~a~~y~ir~s~~ 797 (863)
T TIGR00868 755 PPSKITDLEAGF-QGDNIILTWTAPGDVLDHGRADRYIIRISTS 797 (863)
T ss_pred CCccceeeEEee-cCCEEEEEeeCCCccCCCCccceEEEEecCC
Confidence 455566777644 45569999999986 468899999999765
No 46
>PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators. However they are also found tandemly repeated in Q891H4 from SWISSPROT without other signal conduction domains being present. It is named after the conserved tyrosines found in the alignment. The exact function is not known.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.
Probab=89.24 E-value=1.6 Score=29.35 Aligned_cols=44 Identities=20% Similarity=0.303 Sum_probs=26.1
Q ss_pred EEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCC
Q psy8774 127 KFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPG 171 (427)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~ 171 (427)
.|+-.+....|.........+.+.+|.|| .|.|.|+|.+..|..
T Consensus 11 ~Y~l~g~d~~W~~~~~~~~~~~~~~L~~G-~Y~l~V~a~~~~~~~ 54 (66)
T PF07495_consen 11 RYRLEGFDDEWITLGSYSNSISYTNLPPG-KYTLEVRAKDNNGKW 54 (66)
T ss_dssp EEEEETTESSEEEESSTS-EEEEES--SE-EEEEEEEEEETTS-B
T ss_pred EEEEECCCCeEEECCCCcEEEEEEeCCCE-EEEEEEEEECCCCCc
Confidence 34333223444443333339999999887 599999999987764
No 47
>KOG1225|consensus
Probab=88.50 E-value=2.1 Score=41.84 Aligned_cols=153 Identities=17% Similarity=0.138 Sum_probs=94.1
Q ss_pred CeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC--ceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCC-
Q psy8774 92 PANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN--NVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKA- 168 (427)
Q Consensus 92 p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~- 168 (427)
|.-+....-+..++.+.|... .....|...+.....+. ...........+.+..|.|+..|.++++++-..
T Consensus 369 ~~~~~~~~cs~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~ 442 (525)
T KOG1225|consen 369 PSLLLITECSPPSLCIAGVGR------RRVTHCAGTYCPLGESGGDLQGRVPGDANSVDIQGLEPGDEYNCSVNTVAANI 442 (525)
T ss_pred chhhcccccCCCceeeccccc------cccccccccccccccCCCccceeeccceeeeeeeeecCCcceeeehhhhhhhh
Confidence 334444455677788888722 23344555444422111 122333557888999999999999999987432
Q ss_pred CCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccce
Q psy8774 169 GPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIA 248 (427)
Q Consensus 169 g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (427)
|..+........ -..+..+.+.....+++.+.|..|. ....++.+.+.... .....
T Consensus 443 ~~~~~~~~~~~~-----~~~~g~~~v~~~~~~s~e~~g~~~s---~~~~~~~~~~~~~~--~~~~~-------------- 498 (525)
T KOG1225|consen 443 GSLPKDKSETTV-----LCWNGGLCVDGETESSLEVGGPCPS---SGTCGWEVRCGPCG--NDGGV-------------- 498 (525)
T ss_pred ccCCcccccceE-----eecCCceeeeeeeeccccccCCCCC---ccccceEEEeeecC--ccccc--------------
Confidence 222222222221 2466778888889999999999998 55677888773321 11111
Q ss_pred eEEeeeccccccccccccccCCCCceeccCCCCCCeEEEEE
Q psy8774 249 RIFYTMTAVEDLDEWSQKSVPLTESAELTSLEKFTEYAVAV 289 (427)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~p~t~Y~~~V 289 (427)
........+.+...+|.|++.|.+.+
T Consensus 499 ---------------~~~~~~~~~~~~~~~l~~c~~~~~~~ 524 (525)
T KOG1225|consen 499 ---------------NAEPPPECTSYDRTGLGPCTEYEVSV 524 (525)
T ss_pred ---------------ccCCCCCCCCCCccCcccccceeccc
Confidence 11222356678889999999998865
No 48
>KOG4228|consensus
Probab=87.34 E-value=1.5 Score=46.13 Aligned_cols=80 Identities=11% Similarity=-0.044 Sum_probs=50.1
Q ss_pred eeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeeeeeEEEEccCCCCcEEEEEEEEeeCCCCCCC
Q psy8774 94 NISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTTQTKAVFSNLEEGIEYSAEVQAITKAGPGPW 173 (427)
Q Consensus 94 ~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~ 173 (427)
...++.....++...|..... ...-|.+.++....+ ................+.+...|.+ .+.|..|.+.+
T Consensus 30 ~~~vt~~~~~~~~~~~~~~~t-----~~~~y~v~~~~~~s~-~~~~~~~~~~~~s~~~~~~~~~~~~--~evnt~~~a~~ 101 (1087)
T KOG4228|consen 30 TPNVTGSTATSWVQAELLGST-----WPNYYQVIFKALSSG-YGYIDVDLTTRLSYPCLSPPSFLEL--VEVNTIGRAPF 101 (1087)
T ss_pred CcccccccccceeehhhccCC-----ChhhhheeeeEeccC-cceeeccceeecccCCCCCcchhhh--hhccccccccc
Confidence 445566677788888887742 344677777665333 2222222244456666777777777 77777777777
Q ss_pred CCCeEEEc
Q psy8774 174 SPKLSLMT 181 (427)
Q Consensus 174 s~~~~~~t 181 (427)
+.++.-++
T Consensus 102 ~~~~~~rt 109 (1087)
T KOG4228|consen 102 QCPVAPRT 109 (1087)
T ss_pred ccccCCcc
Confidence 76666555
No 49
>KOG1225|consensus
Probab=86.90 E-value=1.2 Score=43.39 Aligned_cols=145 Identities=14% Similarity=-0.010 Sum_probs=89.4
Q ss_pred CccceEEEEEeeCCCCCCCcceEeEEEEEEecCcc--ceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcccceEE
Q psy8774 4 EEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTL--KENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQETVRYY 81 (427)
Q Consensus 4 ~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~~~~~ 81 (427)
..++.++.+.|.. ......|...|....... -....+.....+.+..|.|++.|..+++++-..-.+.......
T Consensus 376 ~cs~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~g~~~~~~~~~v~~~~~~~~~~~~~ 451 (525)
T KOG1225|consen 376 ECSPPSLCIAGVG----RRRVTHCAGTYCPLGESGGDLQGRVPGDANSVDIQGLEPGDEYNCSVNTVAANIGSLPKDKSE 451 (525)
T ss_pred ccCCCceeecccc----ccccccccccccccccCCCccceeeccceeeeeeeeecCCcceeeehhhhhhhhccCCccccc
Confidence 4455666777772 223344555554422221 1222277788899999999999999999985433332222222
Q ss_pred eCCCCCCCCCCeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceE--EEeeeeeEEEEccCCCCcEEE
Q psy8774 82 TTPEGPPTGPPANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVI--HRNTTQTKAVFSNLEEGIEYS 159 (427)
Q Consensus 82 ~t~~~~p~~~p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~--~~~~~~~~~~i~~L~p~t~Y~ 159 (427)
.+.. ..+..+.+......++.+.|..|. ....++.+.+... ...-.. ......+.+...+|.|++.|.
T Consensus 452 ~~~~----~~~g~~~v~~~~~~s~e~~g~~~s-----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~c~~~~ 521 (525)
T KOG1225|consen 452 TTVL----CWNGGLCVDGETESSLEVGGPCPS-----SGTCGWEVRCGPC-GNDGGVNAEPPPECTSYDRTGLGPCTEYE 521 (525)
T ss_pred ceEe----ecCCceeeeeeeeccccccCCCCC-----ccccceEEEeeec-CcccccccCCCCCCCCCCccCccccccee
Confidence 2221 235677888889999999999985 3455677777332 111111 112356778888999999998
Q ss_pred EEE
Q psy8774 160 AEV 162 (427)
Q Consensus 160 ~~V 162 (427)
+.+
T Consensus 522 ~~~ 524 (525)
T KOG1225|consen 522 VSV 524 (525)
T ss_pred ccc
Confidence 765
No 50
>PF09240 IL6Ra-bind: Interleukin-6 receptor alpha chain, binding; InterPro: IPR015321 Members of this entry adopt a structure consisting of an immunoglobulin-like beta-sandwich, with seven strands in two beta-sheets, in a Greek-key topology. They are required for binding to the cytokine Interleukin-6 []. ; PDB: 1N26_A 1P9M_C 3LB6_C 1PVH_A 3L5H_A 1BQU_A 1I1R_A 3QT2_B 3BPN_C 3BPO_C ....
Probab=85.36 E-value=9.9 Score=28.08 Aligned_cols=39 Identities=13% Similarity=0.312 Sum_probs=29.8
Q ss_pred CCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecc
Q psy8774 188 APLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTA 227 (427)
Q Consensus 188 ~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~ 227 (427)
.|++|.+...+...+..+|.+-... -.-..|.++|+...
T Consensus 1 ~~~nlsC~~~~~~~m~CtW~~g~~~-~~~t~y~L~~~~~~ 39 (99)
T PF09240_consen 1 KPQNLSCFIYNLEYMNCTWEPGKEA-PPDTQYTLYYWYSP 39 (99)
T ss_dssp S-EEEEEEEETTTEEEEEEECCTTC-STTEEEEEEEEETT
T ss_pred CCeeCEEEEECCEEEEEEECCCCCC-CCcccEEEEEEcCC
Confidence 3678999888899999999875532 24478999999874
No 51
>PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators. However they are also found tandemly repeated in Q891H4 from SWISSPROT without other signal conduction domains being present. It is named after the conserved tyrosines found in the alignment. The exact function is not known.; PDB: 3V9F_D 3VA6_B 3OTT_B 4A2M_D 4A2L_B.
Probab=84.46 E-value=9.2 Score=25.53 Aligned_cols=37 Identities=24% Similarity=0.218 Sum_probs=24.7
Q ss_pred ccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCc
Q psy8774 37 TLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQ 75 (427)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~ 75 (427)
..|.... .....+.+++|.|| .|.|.|+|.+..|...
T Consensus 19 ~~W~~~~-~~~~~~~~~~L~~G-~Y~l~V~a~~~~~~~~ 55 (66)
T PF07495_consen 19 DEWITLG-SYSNSISYTNLPPG-KYTLEVRAKDNNGKWS 55 (66)
T ss_dssp SSEEEES-STS-EEEEES--SE-EEEEEEEEEETTS-B-
T ss_pred CeEEECC-CCcEEEEEEeCCCE-EEEEEEEEECCCCCcC
Confidence 4576653 22229999999999 6999999999887554
No 52
>cd02848 Chitinase_N_term Chitinase N-terminus domain. Chitinases hydrolyze the abundant natural biopolymer chitin, producing smaller chito-oligosaccharides. Chitin consists of multiple N-acetyl-D-glucosamine (NAG) residues connected via beta-1,4-glycosidic linkages and is an important structural element of fungal cell wall and arthropod exoskeletons. On the basis of the mode of chitin hydrolysis, chitinases are classified as random, endo-, and exo-chitinases and based on sequence criteria, chitinases belong to families 18 and 19 of glycosyl hydrolases. The N-terminus of chitinase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitob
Probab=79.22 E-value=18 Score=27.03 Aligned_cols=69 Identities=13% Similarity=0.160 Sum_probs=40.5
Q ss_pred CCccceEEEEEeeCCCCCCCcceEeEEEEEEecCccceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCcc
Q psy8774 3 KEEPEVTIELVWSQPTQTYGEILGYRVKYGVREHTLKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQE 76 (427)
Q Consensus 3 ~~~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~ 76 (427)
+....-.|.|+|+... +..-..|.|.+.. ...|.-.......+.++. ...|-.|+.+|++++..|.+.+
T Consensus 29 k~~d~v~V~V~wnvWs--G~~Gd~a~vl~dg--~~V~~G~~~~~~~~at~~-v~kgG~y~m~V~lCn~dGCS~S 97 (106)
T cd02848 29 KVKDAADVSVKWNAWS--GDPGDTYKVLLDG--KEVWSGALTGSSGTATFK-VGKGGRYQMQVALCNGDGCSTS 97 (106)
T ss_pred EeccceEEEEEEeeec--CCCCcEEEEEECC--eEEEcccCCCCccEEEEE-eCCCCeEEEEEEEECCCCccCc
Confidence 3344567899999985 3344667776521 111111111122233333 5778899999999999886654
No 53
>PHA02579 7 baseplate wedge subunit; Provisional
Probab=75.42 E-value=14 Score=37.47 Aligned_cols=82 Identities=18% Similarity=0.126 Sum_probs=56.5
Q ss_pred CCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccccccccc
Q psy8774 187 RAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQK 266 (427)
Q Consensus 187 ~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (427)
++.+.|++...+.+.+.|+|+.. |.--.|.|++.......... .+.+...|...
T Consensus 6 P~vtslrI~kLsaN~v~l~WddV----G~NFyY~Ve~a~t~~~~g~~----------------------ip~~~~~w~nl 59 (1030)
T PHA02579 6 PSVTSLRIDKLSANQVYLTWDDV----GANFYYFVELAETRDADGEL----------------------IPDDELRWINL 59 (1030)
T ss_pred CcccEEEhhhhccceEEEEeecc----CCceEEEEEEEeeccCCCcc----------------------CCCccccceec
Confidence 35667888888999999999877 46678999988653322211 11223455665
Q ss_pred ccCCCCceeccCCCCCCeEEEEEEEEec
Q psy8774 267 SVPLTESAELTSLEKFTEYAVAVAARTV 294 (427)
Q Consensus 267 ~~~~~~~~~l~~L~p~t~Y~~~V~a~~~ 294 (427)
..+..+.+.-..|.|.+.|.+||+....
T Consensus 60 g~T~~~~wFed~~~p~t~Yk~Rv~~~~q 87 (1030)
T PHA02579 60 GYTANNEWFEDKLQPNTYYKFRVAVAAQ 87 (1030)
T ss_pred CcccchhhhhhccCCcceEEEEEEeecc
Confidence 5555566655669999999999998643
No 54
>KOG1948|consensus
Probab=74.59 E-value=1.2e+02 Score=31.92 Aligned_cols=114 Identities=17% Similarity=0.182 Sum_probs=57.7
Q ss_pred cCcceEEEcCCCCCceEEEEEEEEeccCcCc---ccceEEe-CCCCCCCCCCeeeEEE-eecCCEEEEEeeCCCCCCCCc
Q psy8774 45 SKNMSFLITNLERGVEYEFRIAGQNHIGYGQ---ETVRYYT-TPEGPPTGPPANISHH-FQTPDVVCITWDPPLRTHRNG 119 (427)
Q Consensus 45 ~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~---~~~~~~~-t~~~~p~~~p~~~~~~-~~~~~~v~v~W~~p~~~~~~~ 119 (427)
...-+|.|.+|.|++.|.++|.+......-+ +.+..+. ..+++- + -++.+. ....+-+++.-... .+.
T Consensus 943 denG~yRiRGL~Pdc~Y~V~vk~~~~n~~iers~P~s~tv~vgneDv~-g--lnf~af~q~kttdit~~V~~~----~ne 1015 (1165)
T KOG1948|consen 943 DENGTYRIRGLLPDCEYQVHVKSYADNSPIERSFPRSFTVSVGNEDVK-G--LNFMAFIQAKTTDITVEVGMD----TNE 1015 (1165)
T ss_pred ccCCcEEEeccCCCceEEEEEeeccCCCcccccCCceEEEEecccccC-C--ceEEEEeccceEEEEEEEccc----ccc
Confidence 3456799999999999999999884322222 2222222 222222 1 122222 11222233322221 112
Q ss_pred cee-EEEEEEEEccCCCceEEEeeeeeEEEEcc-CCCCcEEEEEEEEe
Q psy8774 120 QIV-LYNVKFHKKIDANNVIHRNTTQTKAVFSN-LEEGIEYSAEVQAI 165 (427)
Q Consensus 120 ~i~-~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~-L~p~t~Y~~~V~a~ 165 (427)
.+. -..+.|+...+.............+-+.+ +.+|..|.+++.+.
T Consensus 1016 ~l~sl~vv~yKs~nddspv~sv~~gql~~ffp~l~~dg~~yvV~l~St 1063 (1165)
T KOG1948|consen 1016 ELQSLRVVIYKSNNDDSPVASVVAGQLLHFFPNLPRDGVEYVVRLEST 1063 (1165)
T ss_pred cccceEEEEEecCCCCCcceEEeccceeeeccccCCCCceEEEEEecc
Confidence 222 23445555533344444444445555555 46999999998765
No 55
>PF14292 SusE: SusE outer membrane protein
Probab=69.67 E-value=45 Score=25.67 Aligned_cols=30 Identities=7% Similarity=0.316 Sum_probs=22.5
Q ss_pred cceEEEEEeeCCCCCCC-cceEeEEEEEEec
Q psy8774 6 PEVTIELVWSQPTQTYG-EILGYRVKYGVRE 35 (427)
Q Consensus 6 ~~~sv~l~W~~p~~~~~-~i~~Y~v~~~~~~ 35 (427)
....++++|+++..+.. ....|.|+....+
T Consensus 43 ~~~a~tftW~~~~~~~~~a~v~Y~lq~~~~~ 73 (122)
T PF14292_consen 43 SDNAVTFTWTAADYGGPDAPVTYTLQFDKKG 73 (122)
T ss_pred CCceEEEEEECCccCCCCCceEEEEEEeccC
Confidence 45689999999985444 4568999988755
No 56
>PF08329 ChitinaseA_N: Chitinase A, N-terminal domain; InterPro: IPR013540 This domain is found in a number of bacterial chitinases and similar viral proteins. It is organised into a fibronectin III module domain-like fold, comprising only beta strands. Its function is not known, but it may be involved in interaction with the enzyme substrate, chitin [, ]. It is separated by a hinge region from the catalytic domain (IPR001223 from INTERPRO); this hinge region is probably mobile, allowing the N-terminal domain to have different relative positions in solution []. ; GO: 0004568 chitinase activity; PDB: 2WLY_A 1EDQ_A 2WM0_A 1X6N_A 1NH6_A 2WK2_A 1EHN_A 2WLZ_A 1EIB_A 1FFR_A ....
Probab=64.52 E-value=24 Score=27.71 Aligned_cols=66 Identities=11% Similarity=0.164 Sum_probs=35.5
Q ss_pred ccceEEEEEeeCCCCCCCcceEeEEEEEEecCc-cceeEeecCcceEEEcCCCCCceEEEEEEEEeccCcCccc
Q psy8774 5 EPEVTIELVWSQPTQTYGEILGYRVKYGVREHT-LKENLVNSKNMSFLITNLERGVEYEFRIAGQNHIGYGQET 77 (427)
Q Consensus 5 ~~~~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~-~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~~~ 77 (427)
...-.|.|+|+... +..-..|.|.+ ++. .|.-... ...+..+ ....+..|+++|+.+|..|.+.+.
T Consensus 35 ~~~v~V~VtwN~Ws--G~~Gd~~kly~---dG~~V~tG~~~-~~~~a~~-~~~~gG~y~~~VeLCN~~GCS~S~ 101 (133)
T PF08329_consen 35 NDQVDVSVTWNVWS--GTNGDTAKLYF---DGVLVWTGPSP-QQKSATF-TVTKGGRYQMQVELCNADGCSTSA 101 (133)
T ss_dssp -SSEEEEEEEE-SS--S---SEEEEEE---TTEEEEEEE---SEEEEEE-EE-S-EEEEEEEEEEETTEEEE--
T ss_pred cCceEEEEEEEEec--CCCCCEEEEEE---CCEEEEeCCCc-cCceEEE-EecCCCEEEEEEEEECCCCcccCC
Confidence 45567999999986 33446788764 222 1211112 1223333 446777899999999999966543
No 57
>PF13754 Big_3_4: Bacterial Ig-like domain (group 3)
Probab=61.70 E-value=31 Score=22.10 Aligned_cols=34 Identities=21% Similarity=0.218 Sum_probs=23.4
Q ss_pred EEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEE
Q psy8774 146 KAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLM 180 (427)
Q Consensus 146 ~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~ 180 (427)
++.+..+ ....|.|.|.|.+..|.........+.
T Consensus 15 s~t~~~~-~dG~y~itv~a~D~AGN~s~~~~~~~t 48 (54)
T PF13754_consen 15 SFTVPAL-ADGTYTITVTATDAAGNTSTSSSVTFT 48 (54)
T ss_pred EEeCCCC-CCccEEEEEEEEeCCCCCCCccceeEE
Confidence 3445555 688899999999999986444333343
No 58
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=61.33 E-value=3.8e+02 Score=32.74 Aligned_cols=26 Identities=12% Similarity=0.055 Sum_probs=18.7
Q ss_pred CeEEEEEEEEeccCCCCCccceEEee
Q psy8774 283 TEYAVAVAARTVNGLGRLSGKVTVKV 308 (427)
Q Consensus 283 t~Y~~~V~a~~~~G~g~~s~~~~~~t 308 (427)
-.|.|+|.|.|..+.-..+..+.++.
T Consensus 1840 G~ytV~L~AsN~vs~~~~s~~~~VQe 1865 (2740)
T TIGR00864 1840 GTFAIRLNASNAVSGKSASREFFAEE 1865 (2740)
T ss_pred eEEEEEEEEEcccCcceeeeeEEEEE
Confidence 36999999999987555555555553
No 59
>KOG3515|consensus
Probab=60.52 E-value=1.2e+02 Score=31.57 Aligned_cols=69 Identities=13% Similarity=0.276 Sum_probs=48.6
Q ss_pred ccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCcceEEeecCCCeEEEEecCCCcCCCc--eEEEEE
Q psy8774 276 LTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVSTHSMTLSWSPPIKLNPV--KYKEVS 346 (427)
Q Consensus 276 l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~~l~~~~~~~~~v~l~W~~P~~~~g~--~Y~i~~ 346 (427)
+-+-.++..|.+.+.+.|.-|.+.-+..+.--| -+..|.||++.......+.|.|.+-- ..|. +|.+.+
T Consensus 658 ~~~~~~~~~y~~~c~t~n~lg~~~v~~~~~~~t-~~~~~~n~~~~~~~~~~i~l~~~p~f-dgg~~q~f~~~~ 728 (741)
T KOG3515|consen 658 ILNHIDGSDYENGCTTQNLLGSDHVSGAIHSGT-ASVGPINLTYDNLTYSTISLEWMPGF-DGGLQQRFFLKY 728 (741)
T ss_pred ccCCcchhhhcceeeecccCCCccccceecCCc-CCCCccceEeeeeeeeeeceeeeecc-ccccccceeeeh
Confidence 334556788998888888888777666444444 44678899999899999999999654 3332 455444
No 60
>TIGR00868 hCaCC calcium-activated chloride channel protein 1. distributions. found a row in 1A13.INFO that was not parsed out
Probab=59.18 E-value=32 Score=36.38 Aligned_cols=77 Identities=23% Similarity=0.348 Sum_probs=46.8
Q ss_pred eeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCC-----ceEEEe---------eeeeEEEE--ccC--CC
Q psy8774 93 ANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDAN-----NVIHRN---------TTQTKAVF--SNL--EE 154 (427)
Q Consensus 93 ~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~-----~~~~~~---------~~~~~~~i--~~L--~p 154 (427)
..|++. .....|.|+|+.|...-..|...+|.|.+...-..- ....++ .+.-.+.+ .+. ..
T Consensus 760 tDL~~~-~~~~~v~LsWTAPG~d~D~G~a~~y~ir~s~~~~~l~~~f~~a~~vn~~~~~P~~ags~e~~~f~~~~~~~~~ 838 (863)
T TIGR00868 760 TDLEAG-FQGDNIILTWTAPGDVLDHGRADRYIIRISTSILDLRDDFNDATQVNTTDLIPKEANSKEVFVFKPEGIPIEN 838 (863)
T ss_pred eeeEEe-ecCCEEEEEeeCCCccCCCCccceEEEEecCCHHHHHhhhccccccccCCcCCCCCCceeEEEEeCCcccccC
Confidence 445543 345569999999975556788999999987542110 001111 11222333 332 35
Q ss_pred CcEEEEEEEEeeCCCC
Q psy8774 155 GIEYSAEVQAITKAGP 170 (427)
Q Consensus 155 ~t~Y~~~V~a~~~~g~ 170 (427)
++.|.|.|+|++..|.
T Consensus 839 ~~~~~~ai~a~d~~~~ 854 (863)
T TIGR00868 839 GTDLFIAVQAIDKANL 854 (863)
T ss_pred CeEEEEEEEEEccccc
Confidence 7889999999988764
No 61
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=58.42 E-value=14 Score=36.16 Aligned_cols=45 Identities=20% Similarity=0.221 Sum_probs=21.4
Q ss_pred ceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCcceEEe
Q psy8774 273 SAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAH 320 (427)
Q Consensus 273 ~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~~l~~~ 320 (427)
.+.+++|+|++.|.+++..... +..+..-.++|.|...+..+++.
T Consensus 65 ~v~v~gL~p~t~Y~Y~~~~~~~---~~~s~~g~~rT~p~~~~~~~r~a 109 (453)
T PF09423_consen 65 KVDVTGLQPGTRYYYRFVVDGG---GQTSPVGRFRTAPDGDPDPFRFA 109 (453)
T ss_dssp EEEE-S--TT-EEEEEEEE--T---TEE---EEEE--TT-----EEEE
T ss_pred ecccCCCCCCceEEEEEEEecC---CCCCCceEEEcCCCCCCCceEEE
Confidence 5679999999999999999322 34455567888755545455554
No 62
>KOG1948|consensus
Probab=58.10 E-value=2.5e+02 Score=29.67 Aligned_cols=22 Identities=18% Similarity=0.211 Sum_probs=20.6
Q ss_pred eeEEEEccCCCCcEEEEEEEEe
Q psy8774 144 QTKAVFSNLEEGIEYSAEVQAI 165 (427)
Q Consensus 144 ~~~~~i~~L~p~t~Y~~~V~a~ 165 (427)
...+.|.+|.|+..|.++|.+.
T Consensus 945 nG~yRiRGL~Pdc~Y~V~vk~~ 966 (1165)
T KOG1948|consen 945 NGTYRIRGLLPDCEYQVHVKSY 966 (1165)
T ss_pred CCcEEEeccCCCceEEEEEeec
Confidence 6789999999999999999987
No 63
>PF13750 Big_3_3: Bacterial Ig-like domain (group 3)
Probab=57.60 E-value=1e+02 Score=25.07 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=24.2
Q ss_pred ccCCCCCCeEEEEEEEEeccCCCCCccceEEee
Q psy8774 276 LTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKV 308 (427)
Q Consensus 276 l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t 308 (427)
+..|..+..|++.|.|.+..|..... .+.|.=
T Consensus 116 fpsle~~~~YtLtV~a~D~aGN~~~~-si~F~y 147 (158)
T PF13750_consen 116 FPSLEADDSYTLTVSATDKAGNQSTK-SISFSY 147 (158)
T ss_pred cCCcCCCCeEEEEEEEEecCCCEEEE-EEEEEE
Confidence 46788999999999999999864333 255554
No 64
>TIGR00864 PCC polycystin cation channel protein. Note: this model has been restricted to the amino half because for technical reasons.
Probab=56.72 E-value=4.5e+02 Score=32.17 Aligned_cols=33 Identities=18% Similarity=0.169 Sum_probs=22.8
Q ss_pred eeccCCCCCCeEEEEEEEEeccCCCCCccceEEe
Q psy8774 274 AELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVK 307 (427)
Q Consensus 274 ~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~ 307 (427)
+.+.-..+| .|.|+|.|.|..|....+..+.+.
T Consensus 1662 ~~vt~~~pG-~Y~VtL~aSN~vG~~t~s~~i~v~ 1694 (2740)
T TIGR00864 1662 AKLNPLEAG-PCDIFLQAANLLGQATADCTIDFL 1694 (2740)
T ss_pred eEEecCCCc-eEEEEEEEeecccceeeEEEEEEE
Confidence 344445665 699999999999876666444443
No 65
>PF14292 SusE: SusE outer membrane protein
Probab=55.42 E-value=94 Score=23.89 Aligned_cols=36 Identities=17% Similarity=0.290 Sum_probs=25.6
Q ss_pred ceEEEeeeCcEEEEEeeeCCCCCC-ceeEEEEEEEec
Q psy8774 191 GVKALATSDQSVEVWWKPVPAGRG-KILGYQIFYTMT 226 (427)
Q Consensus 191 ~l~~~~~~~~si~v~W~~p~~~~g-~i~~Y~I~~~~~ 226 (427)
.+.+.......++++|+++..... ....|.|+....
T Consensus 36 ~i~L~~~~~~a~tftW~~~~~~~~~a~v~Y~lq~~~~ 72 (122)
T PF14292_consen 36 SIVLDEASDNAVTFTWTAADYGGPDAPVTYTLQFDKK 72 (122)
T ss_pred eEEecccCCceEEEEEECCccCCCCCceEEEEEEecc
Confidence 344444456789999999986544 566899998875
No 66
>PF10342 GPI-anchored: Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family; InterPro: IPR018466 This entry represents glycoproteins involved in cell wall (1-->6)-beta-glucan assembly. In yeast a null mutation leads to severe growth defects, aberrant multi-budded morphology, and mating defects [, ]. The entry includes DRMIP and Hesp-379, which are involved in both fruiting body formation and in host attack respectively. Hesp-379 is a haustorially expressed secreted protein; the haustorium being the small sucker that penetrates host tissue [].
Probab=53.58 E-value=80 Score=22.56 Aligned_cols=56 Identities=14% Similarity=0.309 Sum_probs=34.4
Q ss_pred eEEEEEeeCCCCCCCcceEeEEEEEEecCc---cceeEe---ec--CcceEEE-cCCCCCceEEEEEE
Q psy8774 8 VTIELVWSQPTQTYGEILGYRVKYGVREHT---LKENLV---NS--KNMSFLI-TNLERGVEYEFRIA 66 (427)
Q Consensus 8 ~sv~l~W~~p~~~~~~i~~Y~v~~~~~~~~---~~~~~~---~~--~~~~~~~-~~L~p~t~Y~~~V~ 66 (427)
..+.|+|+... .....|.|........ ....+. .. ....+.+ .+|.++..|.|++.
T Consensus 13 ~~~~I~W~~~~---~~~~~~~I~L~~g~~~~~~~~~~ia~~v~~~~gs~~~~~p~~l~~~~~Y~i~~~ 77 (93)
T PF10342_consen 13 QPITITWTSDG---TDPGNVTIYLCNGNNTNLNFVQTIASNVSNSDGSYTWTIPSDLPSGGDYFIQIV 77 (93)
T ss_pred CcEEEEEeCCC---CCCcEEEEEEEcCCCCCcceeEEEEecccCCCCEEEEEcCCCCCCCCcEEEEEE
Confidence 56889999964 1225677877765542 122222 22 3444555 45888889998887
No 67
>PF02010 REJ: REJ domain; InterPro: IPR002859 The REJ (Receptor for Egg Jelly) domain is found in PKD1 P98161 from SWISSPROT and the sperm receptor for egg jelly Q26627 from SWISSPROT. The exact function of this domain is unknown. The domain is 600 amino acids long so is probably composed of multiple structural domains. There are six completely conserved cysteine residues that may form disulphide bridges. This region contains tandem PKD-like domains. Sequence similarity between a region of the autosomal dominant polycystic kidney disease (ADPKD) protein, polycystin-1 and a sea urchin sperm glycoprotein involved in fertilization, the receptor for egg jelly (suREJ) has been known for some time. The suREJ protein binds the glycoprotein coat of the egg (egg jelly), triggering the acrosome reaction, which transforms the sperm into a fusogenic cell. The sequence similarity and expression pattern suggests that the predicted human PKDREJ protein is a mammalian equivalent of the suREJ protein and therefore may have a central role in human fertilization [].; PDB: 2E7M_A 2YRL_A.
Probab=51.23 E-value=10 Score=36.83 Aligned_cols=235 Identities=12% Similarity=0.101 Sum_probs=0.0
Q ss_pred CCCCceEEEEEEEE--eccCcCcccceEEeCCCCCCCCCCeeeEEEeecCC-EEEEEeeCCCCCCCCc--ceeEEEEEEE
Q psy8774 55 LERGVEYEFRIAGQ--NHIGYGQETVRYYTTPEGPPTGPPANISHHFQTPD-VVCITWDPPLRTHRNG--QIVLYNVKFH 129 (427)
Q Consensus 55 L~p~t~Y~~~V~a~--~~~g~~~~~~~~~~t~~~~p~~~p~~~~~~~~~~~-~v~v~W~~p~~~~~~~--~i~~Y~v~~~ 129 (427)
|.+| .|.|.+.+. +..+........+..........-..-........ .+.|.=......+... ....|...+.
T Consensus 47 L~~G-~y~~~~~Vt~~~~~~~~~~~~~~v~V~~s~l~~~I~gG~~~~~~~~~~i~ldgs~S~Dpd~~~~~~~l~y~W~C~ 125 (440)
T PF02010_consen 47 LPPG-DYTFTLTVTASSNPGLSSTDSVTVTVEPSPLVAVIKGGSSRTVGYNSDITLDGSQSYDPDGPPGDSGLTYSWSCT 125 (440)
T ss_dssp --SC-EEEEEEEEE--BCTTEEEEEEEEEEEE------------------------------------------------
T ss_pred CCCC-CEEEEEEEEEECCCCceEEEEEEEEEeeccceeEEcCCccceeecCceEEEeeEEEecccccccCCceEEEEEEe
Q ss_pred EccCC-------CceEEEeeeeeEEEE--ccCCCCcEEEEEEEEeeCCC-CCCCCCCeEEEccccc--------------
Q psy8774 130 KKIDA-------NNVIHRNTTQTKAVF--SNLEEGIEYSAEVQAITKAG-PGPWSPKLSLMTARDM-------------- 185 (427)
Q Consensus 130 ~~~~~-------~~~~~~~~~~~~~~i--~~L~p~t~Y~~~V~a~~~~g-~~~~s~~~~~~t~~~~-------------- 185 (427)
..... ............+.| ..|.++..|.|++.+....+ .+.....+.+.....|
T Consensus 126 ~~~~~~~C~~~~~~~~~~~~~~~~l~i~~~~l~~~~~y~f~ltv~k~~r~s~s~~~~v~v~~~~~p~v~I~~~~n~~~~v 205 (440)
T PF02010_consen 126 DLSSNSACSTPSTNITLLNSSSSSLTIPASTLSPGSTYTFTLTVSKGSRSSSSASQTVTVVSGDPPTVSISCVSNCKGKV 205 (440)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCceeccccccccccccCCCCCEEEEEEhHHcCCCceEEEEEEEEeCCCCceeeEEEEEeccCCCCceeEcccccccccc
Q ss_pred -CCCCCceEEEeee----CcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeecccccc
Q psy8774 186 -VRAPLGVKALATS----DQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDL 260 (427)
Q Consensus 186 -p~~p~~l~~~~~~----~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (427)
|..+..|+....+ ...+...|............=.+.....
T Consensus 206 n~~~~l~L~~~~~~~~~~~~~~~y~Wsl~~~~~~~~~~~~~~~~~~---------------------------------- 251 (440)
T PF02010_consen 206 NPSERLVLQASCSSCDSDSSNVSYSWSLFSLDGVSDSNSELPDWSS---------------------------------- 251 (440)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCEEEEEEEeCCCCcCCCEEEEEEEeecccccccccccccccc----------------------------------
Q ss_pred ccccccccCCCCceecc--CCCCCCeEEEEEEEEeccCCCCCccceEEeecCCCCCcceEEeecCCCeEE
Q psy8774 261 DEWSQKSVPLTESAELT--SLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKPEDVPLSLRAHDVSTHSMT 328 (427)
Q Consensus 261 ~~~~~~~~~~~~~~~l~--~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~~~~P~~l~~~~~~~~~v~ 328 (427)
..........+.|. -|.+|..|.|+|.+.+..+... ...+.+.+-.++....+.+.......+.
T Consensus 252 ---~~~~~~~~~~Lvi~~~~l~~g~~Y~~~l~v~~~~~~~~-~a~~~~~~n~pP~~g~c~v~P~~G~al~ 317 (440)
T PF02010_consen 252 ---MTTTGSSSSNLVIDPGVLEPGSTYTFRLTVTDSSGSSG-SASISFTVNAPPSGGSCSVSPSSGYALE 317 (440)
T ss_dssp ----------------------------------------------------------------------
T ss_pred ---cccccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccc
No 68
>PHA02579 7 baseplate wedge subunit; Provisional
Probab=49.13 E-value=68 Score=32.95 Aligned_cols=78 Identities=21% Similarity=0.241 Sum_probs=50.7
Q ss_pred CeeeEEEeecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCc---------eEEEe-eeeeEEEEccCCCCcEEEEE
Q psy8774 92 PANISHHFQTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANN---------VIHRN-TTQTKAVFSNLEEGIEYSAE 161 (427)
Q Consensus 92 p~~~~~~~~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~---------~~~~~-~~~~~~~i~~L~p~t~Y~~~ 161 (427)
...|++...+.+.+.|.|+.. |.-.-|.|++........ |.... ...+..--..+.|.+.|.+|
T Consensus 8 vtslrI~kLsaN~v~l~WddV------G~NFyY~Ve~a~t~~~~g~~ip~~~~~w~nlg~T~~~~wFed~~~p~t~Yk~R 81 (1030)
T PHA02579 8 VTSLRIDKLSANQVYLTWDDV------GANFYYFVELAETRDADGELIPDDELRWINLGYTANNEWFEDKLQPNTYYKFR 81 (1030)
T ss_pred ccEEEhhhhccceEEEEeecc------CCceEEEEEEEeeccCCCccCCCccccceecCcccchhhhhhccCCcceEEEE
Confidence 457788888999999999987 667789999875532211 22212 22333333449999999999
Q ss_pred EEEeeCCCCCCCCCCe
Q psy8774 162 VQAITKAGPGPWSPKL 177 (427)
Q Consensus 162 V~a~~~~g~~~~s~~~ 177 (427)
|+... .|.. +|+.+
T Consensus 82 v~~~~-qGFe-~SdWv 95 (1030)
T PHA02579 82 VAVAA-QGFE-QSDWV 95 (1030)
T ss_pred EEeec-cCCC-ccccE
Confidence 98763 3432 44443
No 69
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=49.06 E-value=1.2e+02 Score=29.57 Aligned_cols=21 Identities=24% Similarity=0.458 Sum_probs=14.8
Q ss_pred cceEEEcCCCCCceEEEEEEE
Q psy8774 47 NMSFLITNLERGVEYEFRIAG 67 (427)
Q Consensus 47 ~~~~~~~~L~p~t~Y~~~V~a 67 (427)
...+.+++|.|++.|.+++..
T Consensus 63 t~~v~v~gL~p~t~Y~Y~~~~ 83 (453)
T PF09423_consen 63 TVKVDVTGLQPGTRYYYRFVV 83 (453)
T ss_dssp EEEEEE-S--TT-EEEEEEEE
T ss_pred EeecccCCCCCCceEEEEEEE
Confidence 456889999999999999998
No 70
>COG3979 Uncharacterized protein contain chitin-binding domain type 3 [General function prediction only]
Probab=48.33 E-value=23 Score=29.67 Aligned_cols=85 Identities=18% Similarity=0.132 Sum_probs=54.6
Q ss_pred CCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEecccccccccccccccccccccceeEEeeeccccccccccc
Q psy8774 186 VRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMTAVEDLDEWSQKSIPLTESSNIARIFYTMTAVEDLDEWSQ 265 (427)
Q Consensus 186 p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (427)
|..+..+........++.+.|.... .+..+..|.+.+... ..
T Consensus 5 ~~a~~~~~~~~~~~~s~~~~~~s~~-~~~~~~~~p~~~~~d-------------------------------------~~ 46 (181)
T COG3979 5 PPAPKSLMLTNVTTTSASLAASSSS-DNKASDTYPYVYAWD-------------------------------------PK 46 (181)
T ss_pred CcCccceeecchhhhhhhhcccccc-ccccccCCCcccccC-------------------------------------cc
Confidence 4556667777777888999998763 233455555111111 11
Q ss_pred cccCCCCceeccCCCCCCeEEEEEEEEeccC-CCCCccceEEee
Q psy8774 266 KSVPLTESAELTSLEKFTEYAVAVAARTVNG-LGRLSGKVTVKV 308 (427)
Q Consensus 266 ~~~~~~~~~~l~~L~p~t~Y~~~V~a~~~~G-~g~~s~~~~~~t 308 (427)
........+++.+|.+.+.|.+.+.+....| .+.++..+.+.+
T Consensus 47 ~~~t~~~~~~~~g~~~et~y~~~~~a~~t~g~~s~~~~~~~~~~ 90 (181)
T COG3979 47 TVYTTGTVVTVEGLAPETEYWTLVEAPDTSGNWSAWSRLLTVST 90 (181)
T ss_pred ceecccceEEecCcceeeEEEEeeeccCCCCccccceeeeeecc
Confidence 2234556788999999999999999988655 455555444444
No 71
>KOG3515|consensus
Probab=45.97 E-value=1.5e+02 Score=30.82 Aligned_cols=75 Identities=15% Similarity=0.138 Sum_probs=56.8
Q ss_pred EEccCCCCcEEEEEEEEeeCCCCCCCCCCeEEEcccccCCCCCceEEEeeeCcEEEEEeeeCCCCCCceeEEEEEEEec
Q psy8774 148 VFSNLEEGIEYSAEVQAITKAGPGPWSPKLSLMTARDMVRAPLGVKALATSDQSVEVWWKPVPAGRGKILGYQIFYTMT 226 (427)
Q Consensus 148 ~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~t~~~~p~~p~~l~~~~~~~~si~v~W~~p~~~~g~i~~Y~I~~~~~ 226 (427)
.+-+.-++..|.+.+.+.|..|.+..+..+..-+ -+..|.||........++.|.|.+-. ..|....|.+.|...
T Consensus 657 ~~~~~~~~~~y~~~c~t~n~lg~~~v~~~~~~~t---~~~~~~n~~~~~~~~~~i~l~~~p~f-dgg~~q~f~~~~~~~ 731 (741)
T KOG3515|consen 657 WILNHIDGSDYENGCTTQNLLGSDHVSGAIHSGT---ASVGPINLTYDNLTYSTISLEWMPGF-DGGLQQRFFLKYYDL 731 (741)
T ss_pred cccCCcchhhhcceeeecccCCCccccceecCCc---CCCCccceEeeeeeeeeeceeeeecc-ccccccceeeehhhc
Confidence 3445567888998888888888775554444333 34688999999999999999999876 456778888888766
No 72
>PF08329 ChitinaseA_N: Chitinase A, N-terminal domain; InterPro: IPR013540 This domain is found in a number of bacterial chitinases and similar viral proteins. It is organised into a fibronectin III module domain-like fold, comprising only beta strands. Its function is not known, but it may be involved in interaction with the enzyme substrate, chitin [, ]. It is separated by a hinge region from the catalytic domain (IPR001223 from INTERPRO); this hinge region is probably mobile, allowing the N-terminal domain to have different relative positions in solution []. ; GO: 0004568 chitinase activity; PDB: 2WLY_A 1EDQ_A 2WM0_A 1X6N_A 1NH6_A 2WK2_A 1EHN_A 2WLZ_A 1EIB_A 1FFR_A ....
Probab=45.78 E-value=1.3e+02 Score=23.66 Aligned_cols=72 Identities=18% Similarity=0.193 Sum_probs=36.4
Q ss_pred ecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEeee-eeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCeE
Q psy8774 100 QTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRNTT-QTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKLS 178 (427)
Q Consensus 100 ~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~-~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~ 178 (427)
...-.|.|+|+.-. .. .-..|.|... +.....-... ..+..| ....+..|.++|..+|..|++ .|.++.
T Consensus 35 ~~~v~V~VtwN~Ws--G~--~Gd~~kly~d----G~~V~tG~~~~~~~a~~-~~~~gG~y~~~VeLCN~~GCS-~S~~~~ 104 (133)
T PF08329_consen 35 NDQVDVSVTWNVWS--GT--NGDTAKLYFD----GVLVWTGPSPQQKSATF-TVTKGGRYQMQVELCNADGCS-TSAPVE 104 (133)
T ss_dssp -SSEEEEEEEE-SS--S-----SEEEEEET----TEEEEEEE--SEEEEEE-EE-S-EEEEEEEEEEETTEEE-E---EE
T ss_pred cCceEEEEEEEEec--CC--CCCEEEEEEC----CEEEEeCCCccCceEEE-EecCCCEEEEEEEEECCCCcc-cCCCEE
Confidence 45668999999774 21 2345666432 2221211111 223333 346788999999999999986 455655
Q ss_pred EEc
Q psy8774 179 LMT 181 (427)
Q Consensus 179 ~~t 181 (427)
+..
T Consensus 105 V~V 107 (133)
T PF08329_consen 105 VVV 107 (133)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 73
>cd02848 Chitinase_N_term Chitinase N-terminus domain. Chitinases hydrolyze the abundant natural biopolymer chitin, producing smaller chito-oligosaccharides. Chitin consists of multiple N-acetyl-D-glucosamine (NAG) residues connected via beta-1,4-glycosidic linkages and is an important structural element of fungal cell wall and arthropod exoskeletons. On the basis of the mode of chitin hydrolysis, chitinases are classified as random, endo-, and exo-chitinases and based on sequence criteria, chitinases belong to families 18 and 19 of glycosyl hydrolases. The N-terminus of chitinase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitob
Probab=45.75 E-value=1.3e+02 Score=22.62 Aligned_cols=70 Identities=19% Similarity=0.222 Sum_probs=39.2
Q ss_pred ecCCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCceEEEe--eeeeEEEEccCCCCcEEEEEEEEeeCCCCCCCCCCe
Q psy8774 100 QTPDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNVIHRN--TTQTKAVFSNLEEGIEYSAEVQAITKAGPGPWSPKL 177 (427)
Q Consensus 100 ~~~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~~~~~--~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~ 177 (427)
...-.+.|+|+.-.. . .-..|.|.+... ....-. ....+.++. ...|..|.++|..+|..|++ .|.++
T Consensus 31 ~d~v~V~V~wnvWsG--~--~Gd~a~vl~dg~----~V~~G~~~~~~~~at~~-v~kgG~y~m~V~lCn~dGCS-~S~~~ 100 (106)
T cd02848 31 KDAADVSVKWNAWSG--D--PGDTYKVLLDGK----EVWSGALTGSSGTATFK-VGKGGRYQMQVALCNGDGCS-TSAAK 100 (106)
T ss_pred ccceEEEEEEeeecC--C--CCcEEEEEECCe----EEEcccCCCCccEEEEE-eCCCCeEEEEEEEECCCCcc-CcCCE
Confidence 445578899987641 1 223455543211 111101 111233333 46788999999999998886 55555
Q ss_pred EE
Q psy8774 178 SL 179 (427)
Q Consensus 178 ~~ 179 (427)
.+
T Consensus 101 ~I 102 (106)
T cd02848 101 EI 102 (106)
T ss_pred EE
Confidence 44
No 74
>PF13754 Big_3_4: Bacterial Ig-like domain (group 3)
Probab=43.00 E-value=88 Score=19.99 Aligned_cols=28 Identities=25% Similarity=0.264 Sum_probs=21.1
Q ss_pred ceeccCCCCCCeEEEEEEEEeccCCCCCc
Q psy8774 273 SAELTSLEKFTEYAVAVAARTVNGLGRLS 301 (427)
Q Consensus 273 ~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s 301 (427)
++.+..+ ..-.|.|+|.|.+..|.....
T Consensus 15 s~t~~~~-~dG~y~itv~a~D~AGN~s~~ 42 (54)
T PF13754_consen 15 SFTVPAL-ADGTYTITVTATDAAGNTSTS 42 (54)
T ss_pred EEeCCCC-CCccEEEEEEEEeCCCCCCCc
Confidence 4556666 567899999999999965544
No 75
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=41.19 E-value=40 Score=27.06 Aligned_cols=40 Identities=13% Similarity=0.107 Sum_probs=26.5
Q ss_pred CCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeec
Q psy8774 269 PLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVK 309 (427)
Q Consensus 269 ~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~ 309 (427)
+.-..|.+.+|.||+.|.|+-...+.. ....|..+...|.
T Consensus 99 trlsaYqVtNL~pGTkY~isY~Vtkgt-stESS~~i~msT~ 138 (184)
T PF07353_consen 99 TRLSAYQVTNLQPGTKYYISYLVTKGT-STESSNEIPMSTL 138 (184)
T ss_pred ccceeEEeeccCCCcEEEEEEEEecCc-cceecceeccccc
Confidence 344578899999999999997776553 2233334455553
No 76
>PF11344 DUF3146: Protein of unknown function (DUF3146); InterPro: IPR021492 This family of proteins with unknown function appear to be restricted to Cyanobacteria.
Probab=40.75 E-value=20 Score=24.68 Aligned_cols=15 Identities=40% Similarity=0.747 Sum_probs=13.2
Q ss_pred CCCCCceEEEEEEEE
Q psy8774 54 NLERGVEYEFRIAGQ 68 (427)
Q Consensus 54 ~L~p~t~Y~~~V~a~ 68 (427)
.|+||..|.|.|+|.
T Consensus 66 ~LEpGgdY~Ftirak 80 (80)
T PF11344_consen 66 QLEPGGDYSFTIRAK 80 (80)
T ss_pred eccCCCceEEEEecC
Confidence 489999999999873
No 77
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=37.20 E-value=2.1e+02 Score=23.16 Aligned_cols=24 Identities=21% Similarity=0.311 Sum_probs=19.9
Q ss_pred cceEEEcCCCCCceEEEEEEEEec
Q psy8774 47 NMSFLITNLERGVEYEFRIAGQNH 70 (427)
Q Consensus 47 ~~~~~~~~L~p~t~Y~~~V~a~~~ 70 (427)
-..|.+++|.||++|.|+-...++
T Consensus 101 lsaYqVtNL~pGTkY~isY~Vtkg 124 (184)
T PF07353_consen 101 LSAYQVTNLQPGTKYYISYLVTKG 124 (184)
T ss_pred ceeEEeeccCCCcEEEEEEEEecC
Confidence 456899999999999998876654
No 78
>PF10342 GPI-anchored: Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family; InterPro: IPR018466 This entry represents glycoproteins involved in cell wall (1-->6)-beta-glucan assembly. In yeast a null mutation leads to severe growth defects, aberrant multi-budded morphology, and mating defects [, ]. The entry includes DRMIP and Hesp-379, which are involved in both fruiting body formation and in host attack respectively. Hesp-379 is a haustorially expressed secreted protein; the haustorium being the small sucker that penetrates host tissue [].
Probab=35.64 E-value=1.6e+02 Score=20.90 Aligned_cols=58 Identities=14% Similarity=0.125 Sum_probs=34.6
Q ss_pred CCEEEEEeeCCCCCCCCcceeEEEEEEEEccCCCce-E-EEe--e----eeeEEEE-ccCCCCcEEEEEEEE
Q psy8774 102 PDVVCITWDPPLRTHRNGQIVLYNVKFHKKIDANNV-I-HRN--T----TQTKAVF-SNLEEGIEYSAEVQA 164 (427)
Q Consensus 102 ~~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~~~~~~-~-~~~--~----~~~~~~i-~~L~p~t~Y~~~V~a 164 (427)
...+.|.|+... .....|.|........... . ... . ....+.+ .+|.++..|.|++..
T Consensus 12 g~~~~I~W~~~~-----~~~~~~~I~L~~g~~~~~~~~~~ia~~v~~~~gs~~~~~p~~l~~~~~Y~i~~~~ 78 (93)
T PF10342_consen 12 GQPITITWTSDG-----TDPGNVTIYLCNGNNTNLNFVQTIASNVSNSDGSYTWTIPSDLPSGGDYFIQIVN 78 (93)
T ss_pred CCcEEEEEeCCC-----CCCcEEEEEEEcCCCCCcceeEEEEecccCCCCEEEEEcCCCCCCCCcEEEEEEE
Confidence 367999999763 1235678887776431111 1 111 1 1334444 458899999999883
No 79
>KOG1378|consensus
Probab=31.94 E-value=3.1e+02 Score=26.65 Aligned_cols=37 Identities=24% Similarity=0.217 Sum_probs=28.1
Q ss_pred CCCCceeccCCCCCCeEEEEEEEEeccCCCCCccceEEeecC
Q psy8774 269 PLTESAELTSLEKFTEYAVAVAARTVNGLGRLSGKVTVKVKP 310 (427)
Q Consensus 269 ~~~~~~~l~~L~p~t~Y~~~V~a~~~~G~g~~s~~~~~~t~~ 310 (427)
+-....++.+|++++.|.++|-. .+.+|....|+|.|
T Consensus 106 g~ih~~~~~~L~~~t~YyY~~Gs-----~~~wS~~f~F~t~p 142 (452)
T KOG1378|consen 106 GYIHDAVMKNLEPNTRYYYQVGS-----DLKWSEIFSFKTPP 142 (452)
T ss_pred eeEeeeeecCCCCCceEEEEeCC-----CCCcccceEeECCC
Confidence 33456778999999999998743 33378888999866
No 80
>PF13750 Big_3_3: Bacterial Ig-like domain (group 3)
Probab=27.93 E-value=3.3e+02 Score=22.13 Aligned_cols=31 Identities=32% Similarity=0.425 Sum_probs=23.4
Q ss_pred EccCCCCcEEEEEEEEeeCCCCCCCCCCeEEE
Q psy8774 149 FSNLEEGIEYSAEVQAITKAGPGPWSPKLSLM 180 (427)
Q Consensus 149 i~~L~p~t~Y~~~V~a~~~~g~~~~s~~~~~~ 180 (427)
+..|.++..|.+.|.|.+..|.. ....+.|.
T Consensus 116 fpsle~~~~YtLtV~a~D~aGN~-~~~si~F~ 146 (158)
T PF13750_consen 116 FPSLEADDSYTLTVSATDKAGNQ-STKSISFS 146 (158)
T ss_pred cCCcCCCCeEEEEEEEEecCCCE-EEEEEEEE
Confidence 45788999999999999999874 23344443
No 81
>cd05762 Ig8_MLCK Eighth immunoglobulin (Ig)-like domain of human myosin light-chain kinase (MLCK). Ig8_MLCK: the eighth immunoglobulin (Ig)-like domain of human myosin light-chain kinase (MLCK). MLCK is a key regulator of different forms of cell motility involving actin and myosin II. Agonist stimulation of smooth muscle cells increases cytosolic Ca2+, which binds calmodulin. This Ca2+-calmodulin complex in turn binds to and activates MLCK. Activated MLCK leads to the phosphorylation of the 20 kDa myosin regulatory light chain (RLC) of myosin II and the stimulation of actin-activated myosin MgATPase activity. MLCK is widely present in vertebrate tissues; it phosphorylates the 20 kDa RLC of both smooth and nonmuscle myosin II. Phosphorylation leads to the activation of the myosin motor domain and altered structural properties of myosin II. In smooth muscle MLCK it is involved in initiating contraction. In nonmuscle cells, MLCK may participate in cell division and cell motility; it has
Probab=23.46 E-value=2.9e+02 Score=20.00 Aligned_cols=30 Identities=10% Similarity=-0.003 Sum_probs=21.0
Q ss_pred eeEEEEccCCCCcEEEEEEEEeeCCCCCCC
Q psy8774 144 QTKAVFSNLEEGIEYSAEVQAITKAGPGPW 173 (427)
Q Consensus 144 ~~~~~i~~L~p~t~Y~~~V~a~~~~g~~~~ 173 (427)
...+.|.+....-.=.+.+.|.|..|.-..
T Consensus 55 ~s~L~I~~~~~~D~G~Ytc~a~N~~G~~~~ 84 (98)
T cd05762 55 SSKLTITEGQQEHCGCYTLEVENKLGSRQA 84 (98)
T ss_pred eeEEEECCCChhhCEEEEEEEEcCCCceeE
Confidence 355777777766666677788998887433
No 82
>TIGR03000 plancto_dom_1 Planctomycetes uncharacterized domain TIGR03000. Domains described by this model are found, so far, only in the Planctomycetes (Pirellula sp. strain 1 and Gemmata obscuriglobus), in up to six proteins per genome, and may be duplicated within a protein. The function is unknown.
Probab=22.80 E-value=1.3e+02 Score=20.87 Aligned_cols=29 Identities=28% Similarity=0.532 Sum_probs=23.3
Q ss_pred ecCcceEEEcCCCCCceEEEEEEEE-eccC
Q psy8774 44 NSKNMSFLITNLERGVEYEFRIAGQ-NHIG 72 (427)
Q Consensus 44 ~~~~~~~~~~~L~p~t~Y~~~V~a~-~~~g 72 (427)
.....+|.-.+|.+|..|.++|++. +..|
T Consensus 25 ~G~~R~F~T~~L~~G~~y~Y~v~a~~~~dG 54 (75)
T TIGR03000 25 TGTVRTFTTPPLEAGKEYEYTVTAEYDRDG 54 (75)
T ss_pred CccEEEEECCCCCCCCEEEEEEEEEEecCC
Confidence 4556788888999999999999996 3444
No 83
>KOG1378|consensus
Probab=21.02 E-value=7.9e+02 Score=24.03 Aligned_cols=85 Identities=20% Similarity=0.251 Sum_probs=47.5
Q ss_pred CCeeeEEEeecC-CEEEEEeeCCCCCCCCcceeEEEEEEEEcc----CCCc-eEE--------EeeeeeEEEEccCCCCc
Q psy8774 91 PPANISHHFQTP-DVVCITWDPPLRTHRNGQIVLYNVKFHKKI----DANN-VIH--------RNTTQTKAVFSNLEEGI 156 (427)
Q Consensus 91 ~p~~~~~~~~~~-~~v~v~W~~p~~~~~~~~i~~Y~v~~~~~~----~~~~-~~~--------~~~~~~~~~i~~L~p~t 156 (427)
.|..+.++.... +.+.|+|-...... .+..|-..-...+ .+.. .+. ...-...+.+.+|++++
T Consensus 44 ~peQvhlS~~~~~~~m~VswvT~~~~~---~~V~Yg~~~~~~~~~~~~~~~~~~~~~y~~~~~~sg~ih~~~~~~L~~~t 120 (452)
T KOG1378|consen 44 SPEQVHLSFTDNLNEMRVSWVTGDGEE---NVVRYGEVKDKLDNSAARGMTEAWTDGYANGWRDSGYIHDAVMKNLEPNT 120 (452)
T ss_pred CCCeEEEeccCCCCcEEEEEeCCCCCC---ceEEEeecCCCccccccccceEEEecccccccceeeeEeeeeecCCCCCc
Confidence 466777665433 38999999874211 2333332211100 0000 000 01124567889999999
Q ss_pred EEEEEEEEeeCCCCCCCCCCeEEEccc
Q psy8774 157 EYSAEVQAITKAGPGPWSPKLSLMTAR 183 (427)
Q Consensus 157 ~Y~~~V~a~~~~g~~~~s~~~~~~t~~ 183 (427)
.|.++|=. ...+|....|++..
T Consensus 121 ~YyY~~Gs-----~~~wS~~f~F~t~p 142 (452)
T KOG1378|consen 121 RYYYQVGS-----DLKWSEIFSFKTPP 142 (452)
T ss_pred eEEEEeCC-----CCCcccceEeECCC
Confidence 99999632 22378899998854
No 84
>PF04775 Bile_Hydr_Trans: Acyl-CoA thioester hydrolase/BAAT N-terminal region; InterPro: IPR006862 This entry presents the N-termini of acyl-CoA thioester hydrolase and bile acid-CoA:amino acid N-acetyltransferase (BAAT) []. This region is not thought to contain the active site of either enzyme. Thioesterase isoforms have been identified in peroxisomes, cytoplasm and mitochondria, where they are thought to have distinct functions in lipid metabolism []. For example, in peroxisomes, the hydrolase acts on bile-CoA esters [].; GO: 0016290 palmitoyl-CoA hydrolase activity, 0006629 lipid metabolic process; PDB: 3HLK_B 3K2I_B.
Probab=20.60 E-value=1.9e+02 Score=22.52 Aligned_cols=26 Identities=19% Similarity=0.289 Sum_probs=17.1
Q ss_pred cceEEEcCCCCCceEEEEEEEEeccC
Q psy8774 47 NMSFLITNLERGVEYEFRIAGQNHIG 72 (427)
Q Consensus 47 ~~~~~~~~L~p~t~Y~~~V~a~~~~g 72 (427)
.-.+.+++|.|++.++++.......|
T Consensus 4 ~~~I~v~GL~p~~~vtl~a~~~~~~g 29 (126)
T PF04775_consen 4 PVDIRVSGLPPGQEVTLRARLTDDNG 29 (126)
T ss_dssp --EEEEES--TT-EEEEEEEEE-TTS
T ss_pred CeEEEEeCCCCCCEEEEEEEEEeCCC
Confidence 34678899999999999998887655
Done!