BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy8777
(291 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9QUM9|PSA6_MOUSE Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1
Length = 246
Score = 312 bits (799), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 141/196 (71%), Positives = 168/196 (85%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
AGFDRHITIFSPEGRLYQVEYAFKAINQGG+TSVAV+G D AV+ T+KKVPD L+D TV
Sbjct: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTV 66
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
T+L+ +T ++GCVMTGM ADSR QVQRARYEAA++KYK+GY +P+D LC RIADISQVYT
Sbjct: 67 THLFKITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYT 126
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
QNAEMRPLGC MILI DE +GP +YK DPAGYYC FKA + GVK TE+ S+LEKK KKK
Sbjct: 127 QNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKK 186
Query: 276 TNYTGDETIQLAISCL 291
++T ++T++ AI+CL
Sbjct: 187 FDWTFEQTVETAITCL 202
Score = 162 bits (409), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 85/95 (89%)
Query: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSL 60
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGG+TSVAV+G D AV+ T+KKVPD L
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 VDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
+D TVT+L+ +T ++GCVMTGM ADSR QVQRAR
Sbjct: 61 LDSSTVTHLFKITESIGCVMTGMTADSRSQVQRAR 95
>sp|P60901|PSA6_RAT Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1
SV=1
Length = 246
Score = 311 bits (797), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 141/196 (71%), Positives = 167/196 (85%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
AGFDRHITIFSPEGRLYQVEYAFKAINQGG+TSVAV+G D AV+ T+KKVPD L+D TV
Sbjct: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTV 66
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
T+L+ +T +GCVMTGM ADSR QVQRARYEAA++KYK+GY +P+D LC RIADISQVYT
Sbjct: 67 THLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYT 126
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
QNAEMRPLGC MILI DE +GP +YK DPAGYYC FKA + GVK TE+ S+LEKK KKK
Sbjct: 127 QNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKK 186
Query: 276 TNYTGDETIQLAISCL 291
++T ++T++ AI+CL
Sbjct: 187 FDWTFEQTVETAITCL 202
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 84/95 (88%)
Query: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSL 60
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGG+TSVAV+G D AV+ T+KKVPD L
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 VDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
+D TVT+L+ +T +GCVMTGM ADSR QVQRAR
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRAR 95
>sp|P60900|PSA6_HUMAN Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1
Length = 246
Score = 311 bits (797), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 141/196 (71%), Positives = 167/196 (85%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
AGFDRHITIFSPEGRLYQVEYAFKAINQGG+TSVAV+G D AV+ T+KKVPD L+D TV
Sbjct: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTV 66
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
T+L+ +T +GCVMTGM ADSR QVQRARYEAA++KYK+GY +P+D LC RIADISQVYT
Sbjct: 67 THLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYT 126
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
QNAEMRPLGC MILI DE +GP +YK DPAGYYC FKA + GVK TE+ S+LEKK KKK
Sbjct: 127 QNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKK 186
Query: 276 TNYTGDETIQLAISCL 291
++T ++T++ AI+CL
Sbjct: 187 FDWTFEQTVETAITCL 202
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 84/95 (88%)
Query: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSL 60
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGG+TSVAV+G D AV+ T+KKVPD L
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 VDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
+D TVT+L+ +T +GCVMTGM ADSR QVQRAR
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRAR 95
>sp|Q2YDE4|PSA6_BOVIN Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1
Length = 246
Score = 311 bits (797), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 141/196 (71%), Positives = 167/196 (85%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
AGFDRHITIFSPEGRLYQVEYAFKAINQGG+TSVAV+G D AV+ T+KKVPD L+D TV
Sbjct: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTV 66
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
T+L+ +T +GCVMTGM ADSR QVQRARYEAA++KYK+GY +P+D LC RIADISQVYT
Sbjct: 67 THLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYT 126
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
QNAEMRPLGC MILI DE +GP +YK DPAGYYC FKA + GVK TE+ S+LEKK KKK
Sbjct: 127 QNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKK 186
Query: 276 TNYTGDETIQLAISCL 291
++T ++T++ AI+CL
Sbjct: 187 FDWTFEQTVETAITCL 202
Score = 161 bits (408), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 84/95 (88%)
Query: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSL 60
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGG+TSVAV+G D AV+ T+KKVPD L
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 61 VDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
+D TVT+L+ +T +GCVMTGM ADSR QVQRAR
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRAR 95
>sp|Q9XZJ4|PSA6_DROME Proteasome subunit alpha type-6 OS=Drosophila melanogaster
GN=Prosalpha1 PE=2 SV=2
Length = 244
Score = 285 bits (729), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 136/196 (69%), Positives = 161/196 (82%), Gaps = 2/196 (1%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
AGFDRHITIFSPEGRLYQVEYAFKAI Q +T+VA+K D AVVAT+KKV + + P+TV
Sbjct: 7 AGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETV 66
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
T+L+ +T +GC MTG ADSR QVQ+ARYEAA+F+YK+GY MP+D LC RIADI+QVYT
Sbjct: 67 THLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYT 126
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
QNAEMRPLGCSM+LI+YD GP +YKTDPAGY+ FKA SVG KT EANSYLEKK+ K
Sbjct: 127 QNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKY--K 184
Query: 276 TNYTGDETIQLAISCL 291
N + ++ IQLAISCL
Sbjct: 185 PNLSEEKAIQLAISCL 200
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 78/95 (82%)
Query: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSL 60
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAI Q +T+VA+K D AVVAT+KKV +
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKN 60
Query: 61 VDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
+ P+TVT+L+ +T +GC MTG ADSR QVQ+AR
Sbjct: 61 IVPETVTHLFRITKDIGCAMTGRIADSRSQVQKAR 95
>sp|O17586|PSA6_CAEEL Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1
PE=1 SV=1
Length = 246
Score = 255 bits (652), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 117/196 (59%), Positives = 152/196 (77%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
AGFDRHITIFSPEGR+YQVEYAFKAIN +T+VAVKG D AV+A +K+VPDSL+ TV
Sbjct: 7 AGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTV 66
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
T++Y ++ +VGC GM D+++Q++RA+ EAAS+KYK+GY MP + L ++AD++Q YT
Sbjct: 67 TSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYT 126
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
QNAEMR LGC+++ ISYD+ +GP +Y+ DPAGYY K VSVGVK A S+LEKK KKK
Sbjct: 127 QNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKK 186
Query: 276 TNYTGDETIQLAISCL 291
+ T E I+LAI L
Sbjct: 187 SELTSTEAIELAIEAL 202
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 79/95 (83%)
Query: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSL 60
MSRGSSAGFDRHITIFSPEGR+YQVEYAFKAIN +T+VAVKG D AV+A +K+VPDSL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSL 60
Query: 61 VDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
+ TVT++Y ++ +VGC GM D+++Q++RA+
Sbjct: 61 IVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQ 95
>sp|O81146|PSA6A_ARATH Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1
PE=1 SV=2
Length = 246
Score = 234 bits (597), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 109/196 (55%), Positives = 145/196 (73%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
AG+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ V+G D+ V T+KKVPD L+D +V
Sbjct: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSV 66
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
T+L+ +T +G V TG+ AD+R VQ+AR +AA F++ +GY MP+D L IAD SQVYT
Sbjct: 67 THLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYT 126
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
Q+A MRPLG +++ DE GPL+YK DPAG++ KA S G+K EA ++LEKK K+
Sbjct: 127 QHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKEN 186
Query: 276 TNYTGDETIQLAISCL 291
++T DET+Q AIS L
Sbjct: 187 PSFTFDETVQTAISAL 202
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 75/95 (78%)
Query: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSL 60
MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ V+G D+ V T+KKVPD L
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 VDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
+D +VT+L+ +T +G V TG+ AD+R VQ+AR
Sbjct: 61 LDQSSVTHLFPITKYIGLVATGITADARSLVQQAR 95
>sp|O81147|PSA6B_ARATH Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2
PE=1 SV=1
Length = 246
Score = 234 bits (596), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 110/196 (56%), Positives = 144/196 (73%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
AG+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ V+G D+ V T+KKVPD L+D +V
Sbjct: 7 AGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSV 66
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
++L+ +T +G + TGM ADSR VQ+AR EAA F++++GY MP D L IAD SQVYT
Sbjct: 67 SHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIADKSQVYT 126
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
Q+A MRPLG +++ DE GPL+YK DPAG++ KA S G+K EA ++LEKK K+
Sbjct: 127 QHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKEN 186
Query: 276 TNYTGDETIQLAISCL 291
+T DET+Q AIS L
Sbjct: 187 PAFTYDETVQTAISAL 202
Score = 127 bits (320), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 75/95 (78%)
Query: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSL 60
MSRGS AG+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ V+G D+ V T+KKVPD L
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 VDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
+D +V++L+ +T +G + TGM ADSR VQ+AR
Sbjct: 61 LDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQAR 95
>sp|Q9XG77|PSA6_TOBAC Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2
SV=1
Length = 246
Score = 226 bits (577), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 142/196 (72%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ V+G D+ V T+KKVPD L+D +V
Sbjct: 7 GGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSV 66
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
++L+ +T +G + TGM AD+R VQ+AR EAA F++K+GY MP+D L IAD SQVYT
Sbjct: 67 SHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYT 126
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
Q+A MRPLG +++ DE +GP ++K DPAG++ KA S G K EA ++LEKK K
Sbjct: 127 QHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKND 186
Query: 276 TNYTGDETIQLAISCL 291
++ +ET+Q AIS L
Sbjct: 187 PAFSYEETVQTAISAL 202
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 74/95 (77%)
Query: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSL 60
MSRGS G+DRHITIFSPEGRL+QVEYAFKA+ G+TS+ V+G D+ V T+KKVPD L
Sbjct: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 VDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
+D +V++L+ +T +G + TGM AD+R VQ+AR
Sbjct: 61 LDQTSVSHLFPITKYLGLLATGMTADARTLVQQAR 95
>sp|Q9LSU3|PSA6_ORYSJ Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica
GN=PAA1 PE=2 SV=1
Length = 246
Score = 226 bits (576), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 142/196 (72%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
AG+DRHITIFSPEGRLYQVEYAFKA+ GVTS+ V+G D+ V T+KKVPD L+D +V
Sbjct: 7 AGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 66
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
T+L+ +T +G + TG+ AD+R V +AR EAA F++K GY MP+D L IAD +QVYT
Sbjct: 67 THLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIADKAQVYT 126
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
Q+A MRPLG +++ YDE + ++K DPAG++ KA S G+K EA ++LEKK K
Sbjct: 127 QHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKDD 186
Query: 276 TNYTGDETIQLAISCL 291
++ +ET+Q+AIS L
Sbjct: 187 PQFSYEETVQIAISAL 202
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 74/95 (77%)
Query: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSL 60
MSRG+ AG+DRHITIFSPEGRLYQVEYAFKA+ GVTS+ V+G D+ V T+KKVPD L
Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKL 60
Query: 61 VDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
+D +VT+L+ +T +G + TG+ AD+R V +AR
Sbjct: 61 LDHTSVTHLFPITKYIGLLATGLTADARSLVYQAR 95
>sp|O48551|PSA6_SOYBN Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2
Length = 246
Score = 224 bits (571), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 106/196 (54%), Positives = 141/196 (71%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
G++RHITIFSPEGRL+QVEYAFKA+ G+TS+ V+G D+ V T KKVPD L+D +V
Sbjct: 7 GGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKLLDNTSV 66
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
T+L+ +T +G + TGM AD+R VQ+AR EAA F++ +GY MP+D L IAD SQVYT
Sbjct: 67 THLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYT 126
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
Q+A MRPLG +++ D+ GP +YK DPAG+Y KA S G+K EA ++LEKK K
Sbjct: 127 QHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKND 186
Query: 276 TNYTGDETIQLAISCL 291
++T +ET+Q AIS L
Sbjct: 187 PSFTYEETVQTAISAL 202
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/95 (58%), Positives = 73/95 (76%)
Query: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSL 60
MSRGS G++RHITIFSPEGRL+QVEYAFKA+ G+TS+ V+G D+ V T KKVPD L
Sbjct: 1 MSRGSGGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKL 60
Query: 61 VDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
+D +VT+L+ +T +G + TGM AD+R VQ+AR
Sbjct: 61 LDNTSVTHLFPITKYLGLLATGMTADARTLVQQAR 95
>sp|O94517|PSA1_SCHPO Probable proteasome subunit alpha type-1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC646.16 PE=3 SV=1
Length = 244
Score = 224 bits (571), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 109/198 (55%), Positives = 141/198 (71%), Gaps = 5/198 (2%)
Query: 97 GFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVT 156
GFDR IT+FSPEGRLYQVEYAFKA N G+TSV V G + A V ++KKVPD L+D TV
Sbjct: 6 GFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVK 65
Query: 157 NLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQ 216
+++ +T +GCVMTG AD+R QV RAR EAA F+YK+GY MP D L R+A+I+QV TQ
Sbjct: 66 HVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQ 125
Query: 217 NAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK- 275
A MRPLG +M L++ D+ GP ++K DPAG+Y +KA S G K TE ++LEK+FKK
Sbjct: 126 RAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDG 185
Query: 276 --TNYTGDETIQLAISCL 291
+N T +T++ I L
Sbjct: 186 IPSNLT--DTVETGIQAL 201
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 68/89 (76%)
Query: 8 GFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVT 67
GFDR IT+FSPEGRLYQVEYAFKA N G+TSV V G + A V ++KKVPD L+D TV
Sbjct: 6 GFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVK 65
Query: 68 NLYSLTPTVGCVMTGMQADSRYQVQRARA 96
+++ +T +GCVMTG AD+R QV RAR+
Sbjct: 66 HVFPITKGIGCVMTGSIADARAQVSRARS 94
>sp|Q54XM7|PSA6_DICDI Proteasome subunit alpha type-6 OS=Dictyostelium discoideum
GN=psmA6 PE=3 SV=1
Length = 250
Score = 218 bits (554), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 139/193 (72%), Gaps = 1/193 (0%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
AG+D I IFSP+G+LYQ+EYAFKAI GG+TSV ++G D VVAT+KK+PD L+DPK+V
Sbjct: 7 AGYDMSI-IFSPQGKLYQIEYAFKAIKTGGLTSVGIRGKDCVVVATQKKIPDKLIDPKSV 65
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
T+LY LT +GCV TG+ DS+ Q RA E A+F +K GY +P + L R+ADI+Q+ T
Sbjct: 66 TSLYKLTDYIGCVQTGIVPDSKSQASRAIQECATFHHKFGYQIPPNVLAKRMADIAQLST 125
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
Q+A RPLG +MILI D+ GP ++K DPAG + +KA + G K E+ ++LEKKFK
Sbjct: 126 QHASARPLGVAMILIGIDDELGPQLFKVDPAGVFTGYKATAAGEKEQESTNFLEKKFKSN 185
Query: 276 TNYTGDETIQLAI 288
+ DETIQ+++
Sbjct: 186 PQLSKDETIQVSL 198
Score = 122 bits (306), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 73/94 (77%), Gaps = 1/94 (1%)
Query: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSL 60
MSR +AG+D I IFSP+G+LYQ+EYAFKAI GG+TSV ++G D VVAT+KK+PD L
Sbjct: 1 MSRSGTAGYDMSI-IFSPQGKLYQIEYAFKAIKTGGLTSVGIRGKDCVVVATQKKIPDKL 59
Query: 61 VDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRA 94
+DPK+VT+LY LT +GCV TG+ DS+ Q RA
Sbjct: 60 IDPKSVTSLYKLTDYIGCVQTGIVPDSKSQASRA 93
>sp|P21243|PSA1_YEAST Proteasome subunit alpha type-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SCL1 PE=1 SV=1
Length = 252
Score = 199 bits (507), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 138/199 (69%), Gaps = 5/199 (2%)
Query: 98 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 157
+DRHITIFSPEGRLYQVEYAFKA NQ + S+AV+G D VV ++KKVPD L+DP TV+
Sbjct: 12 YDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSY 71
Query: 158 LYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQN 217
++ ++ T+G V+ G D+R RA+ EAA F+YK+GY MP D L R+A++SQ+YTQ
Sbjct: 72 IFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQR 131
Query: 218 AEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK-KT 276
A MRPLG + +S DE GP IYKTDPAGYY +KA + G K E + LE FKK K
Sbjct: 132 AYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKI 191
Query: 277 NYTGDET----IQLAISCL 291
++ +E+ ++ AI+ +
Sbjct: 192 DHINEESWEKVVEFAITHM 210
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 47/80 (58%), Positives = 62/80 (77%)
Query: 9 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 68
+DRHITIFSPEGRLYQVEYAFKA NQ + S+AV+G D VV ++KKVPD L+DP TV+
Sbjct: 12 YDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSY 71
Query: 69 LYSLTPTVGCVMTGMQADSR 88
++ ++ T+G V+ G D+R
Sbjct: 72 IFCISRTIGMVVNGPIPDAR 91
>sp|Q9GU37|PSA1_TRYBB Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2
SV=1
Length = 266
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 125/205 (60%), Gaps = 8/205 (3%)
Query: 94 ARAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPK 153
+RAGFD++IT+FSPEG LYQVEYAFKA+ G+ +VA++ D +V T+ VPD L+ P+
Sbjct: 2 SRAGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPE 61
Query: 154 TVTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQV 213
T+T+LY++ G +TG D + VQ+AR EA+ +KY++G M + L D++QV
Sbjct: 62 TITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMAQV 121
Query: 214 YTQNAEMRPLGCSMILISYDENEG-----PLIYKTDPAGYYCSFKAVSVGVKTTEANSYL 268
TQ A MR +G M + ++N+ P IY DPAG + A +VG K EA ++L
Sbjct: 122 RTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAG-GAAVHACAVGKKQIEACAFL 180
Query: 269 EKKFKKKTNYT--GDETIQLAISCL 291
EKK K +T E +A++ L
Sbjct: 181 EKKQKNAPFHTLSQKEAAMIALAAL 205
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 64/91 (70%)
Query: 5 SSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPK 64
S AGFD++IT+FSPEG LYQVEYAFKA+ G+ +VA++ D +V T+ VPD L+ P+
Sbjct: 2 SRAGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPE 61
Query: 65 TVTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
T+T+LY++ G +TG D + VQ+AR
Sbjct: 62 TITSLYNVNDNTGVCITGRAPDGKALVQKAR 92
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 125/201 (62%), Gaps = 4/201 (1%)
Query: 91 VQRARAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLV 150
VQ A+ +DR IT+FSP+GRL+QVEYA +A+ +G T++ +K + V+ +K+V L+
Sbjct: 3 VQPAQTAYDRAITVFSPDGRLFQVEYAREAVKRG-TTALGIKVEEGVVLGVDKRVTSKLI 61
Query: 151 DPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADI 210
+P+++ +Y + +G G+ AD+R V+RAR EA +++Y +G + +D L I D+
Sbjct: 62 EPESIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDL 121
Query: 211 SQVYTQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEK 270
QVYTQ+ +RP G ++++ D +G +++TDP+G KA ++G EA E+
Sbjct: 122 KQVYTQHGGVRPFGTALLIAGVD-TKGCRLFETDPSGALTEHKATAIGEGRQEALDVFEE 180
Query: 271 KFKKKTNYTGDETIQLAISCL 291
++++ + T E I+LA+ L
Sbjct: 181 EYRE--DMTLQEAIELAVRAL 199
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 79/144 (54%), Gaps = 16/144 (11%)
Query: 5 SSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPK 64
+ +DR IT+FSP+GRL+QVEYA +A+ +G T++ +K + V+ +K+V L++P+
Sbjct: 6 AQTAYDRAITVFSPDGRLFQVEYAREAVKRG-TTALGIKVEEGVVLGVDKRVTSKLIEPE 64
Query: 65 TVTNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRHITIFSPEGRLYQVEYAFKAI--- 121
++ +Y + +G G+ AD+R V+RAR + + G V+ KAI
Sbjct: 65 SIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTY---GEPIDVDVLVKAICDL 121
Query: 122 -----NQGGV----TSVAVKGVDT 136
GGV T++ + GVDT
Sbjct: 122 KQVYTQHGGVRPFGTALLIAGVDT 145
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 144 bits (363), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 124/197 (62%), Gaps = 5/197 (2%)
Query: 95 RAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 154
+AG+DR IT+FSP+GRL+QV+YA +A+ +G T+V VK D V+A EK+V L++P++
Sbjct: 7 QAGYDRAITVFSPDGRLFQVQYAREAVKRGA-TAVGVKCKDGVVLAVEKRVTSKLIEPES 65
Query: 155 VTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVY 214
++ + + +G+ AD+R V RAR EA ++ +G +P+ L +I D+ Q++
Sbjct: 66 YEKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMH 125
Query: 215 TQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
TQ +RP G ++++ NE P +++TDP+G Y +KAV++G A + E+K++
Sbjct: 126 TQYGGVRPFGAALLMAGV--NEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRD 183
Query: 275 KTNYTGDETIQLAISCL 291
+ T +E I+LA+ L
Sbjct: 184 EM--TLEEAIKLAVLAL 198
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
AG+DR IT+FSP+GRL+QV+YA +A+ +G T+V VK D V+A EK+V L++P++
Sbjct: 8 AGYDRAITVFSPDGRLFQVQYAREAVKRGA-TAVGVKCKDGVVLAVEKRVTSKLIEPESY 66
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
++ + + +G+ AD+R V RAR
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVDRAR 95
>sp|Q10KF0|PSA2_ORYSJ Proteasome subunit alpha type-2 OS=Oryza sativa subsp. japonica
GN=PAB1 PE=2 SV=1
Length = 235
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 116/190 (61%), Gaps = 4/190 (2%)
Query: 102 ITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNLYSL 161
+T FSP G+L Q+E+A A+ G TS+ +K + V+ATEKK+P LVD +V + SL
Sbjct: 10 LTTFSPSGKLVQIEHALTAVGSGQ-TSLGIKAANGVVIATEKKLPSILVDETSVQKIQSL 68
Query: 162 TPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMR 221
TP +G V +GM D R V+++R +A + + ++P+ QL A + Q +TQ+ +R
Sbjct: 69 TPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVR 128
Query: 222 PLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGD 281
P G S+++ YD+N GP +Y+ DP+G Y S+KA ++G + A ++LEK++ + D
Sbjct: 129 PFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMEL--D 185
Query: 282 ETIQLAISCL 291
+ I AI L
Sbjct: 186 DAIHTAILTL 195
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 13 ITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNLYSL 72
+T FSP G+L Q+E+A A+ G TS+ +K + V+ATEKK+P LVD +V + SL
Sbjct: 10 LTTFSPSGKLVQIEHALTAVGSGQ-TSLGIKAANGVVIATEKKLPSILVDETSVQKIQSL 68
Query: 73 TPTVGCVMTGMQADSRYQVQRAR 95
TP +G V +GM D R V+++R
Sbjct: 69 TPNIGVVYSGMGPDFRVLVRKSR 91
>sp|A2YVR7|PSA2_ORYSI Proteasome subunit alpha type-2 OS=Oryza sativa subsp. indica
GN=PAB1 PE=2 SV=2
Length = 235
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 116/190 (61%), Gaps = 4/190 (2%)
Query: 102 ITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNLYSL 161
+T FSP G+L Q+E+A A+ G TS+ +K + V+ATEKK+P LVD +V + SL
Sbjct: 10 LTTFSPSGKLVQIEHALTAVGSGQ-TSLGIKAANGVVIATEKKLPSILVDETSVQKIQSL 68
Query: 162 TPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMR 221
TP +G V +GM D R V+++R +A + + ++P+ QL A + Q +TQ+ +R
Sbjct: 69 TPNIGVVYSGMGPDFRVLVRKSRKQAQQYYRLYKETIPVTQLVRETAAVMQEFTQSGGVR 128
Query: 222 PLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGD 281
P G S+++ YD+N GP +Y+ DP+G Y S+KA ++G + A ++LEK++ + D
Sbjct: 129 PFGVSLLIAGYDDN-GPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMEL--D 185
Query: 282 ETIQLAISCL 291
+ I AI L
Sbjct: 186 DAIHTAILTL 195
Score = 75.9 bits (185), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 13 ITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNLYSL 72
+T FSP G+L Q+E+A A+ G TS+ +K + V+ATEKK+P LVD +V + SL
Sbjct: 10 LTTFSPSGKLVQIEHALTAVGSGQ-TSLGIKAANGVVIATEKKLPSILVDETSVQKIQSL 68
Query: 73 TPTVGCVMTGMQADSRYQVQRAR 95
TP +G V +GM D R V+++R
Sbjct: 69 TPNIGVVYSGMGPDFRVLVRKSR 91
>sp|Q9V122|PSA_PYRAB Proteasome subunit alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=psmA PE=3 SV=1
Length = 260
Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 121/197 (61%), Gaps = 5/197 (2%)
Query: 95 RAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 154
+AG+DR IT+FSP+GRL+QV YA +A+ +G T+V VK D V+A EK++ L++P++
Sbjct: 7 QAGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKCKDGVVLAVEKRITSRLIEPES 65
Query: 155 VTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVY 214
++ + + +G+ AD+R V RAR EA + +G P+ + +I D+ Q++
Sbjct: 66 YEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMH 125
Query: 215 TQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
TQ +RP G ++++ N+ P +Y+TDP+G Y ++KAV++G A + E K+
Sbjct: 126 TQYGGVRPFGAALLMAGV--NDKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKY-- 181
Query: 275 KTNYTGDETIQLAISCL 291
+ + T DE I+LAI L
Sbjct: 182 RDDMTLDEAIKLAIFAL 198
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
AG+DR IT+FSP+GRL+QV YA +A+ +G T+V VK D V+A EK++ L++P++
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKCKDGVVLAVEKRITSRLIEPESY 66
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
++ + + +G+ AD+R V RAR
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVNRAR 95
>sp|Q60177|PSA_METJA Proteasome subunit alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=psmA PE=1 SV=1
Length = 261
Score = 142 bits (357), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 119/196 (60%), Gaps = 4/196 (2%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
+ +DR IT+FSPEGRLYQVEYA +A+ +G T++ + D V+A ++++ LV +++
Sbjct: 7 SAYDRAITVFSPEGRLYQVEYAREAVRRG-TTAIGIACKDGVVLAVDRRITSKLVKIRSI 65
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
++ + V +G+ AD+R + RAR EA ++ +G + I+ L +I DI Q YT
Sbjct: 66 EKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYT 125
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
Q+ +RP G S+++ D+NE L ++TDP+G +KA ++G LEK+++
Sbjct: 126 QHGGVRPFGVSLLIAGIDKNEARL-FETDPSGALIEYKATAIGSGRPVVMELLEKEYRD- 183
Query: 276 TNYTGDETIQLAISCL 291
+ T DE ++LAI+ L
Sbjct: 184 -DITLDEGLELAITAL 198
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
+ +DR IT+FSPEGRLYQVEYA +A+ + G T++ + D V+A ++++ LV +++
Sbjct: 7 SAYDRAITVFSPEGRLYQVEYAREAVRR-GTTAIGIACKDGVVLAVDRRITSKLVKIRSI 65
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
++ + V +G+ AD+R + RAR
Sbjct: 66 EKIFQIDDHVAAATSGLVADARVLIDRAR 94
>sp|P23638|PSA3_YEAST Proteasome subunit alpha type-3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PRE9 PE=1 SV=1
Length = 258
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 113/195 (57%), Gaps = 4/195 (2%)
Query: 98 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 157
+D TIFSPEGRLYQVEYA ++I+ G T++ + D V+A E+KV +L++ T T
Sbjct: 6 YDSRTTIFSPEGRLYQVEYALESISHAG-TAIGIMASDGIVLAAERKVTSTLLEQDTSTE 64
Query: 158 -LYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQ 216
LY L + + G+ AD+ + AR A ++ + +P++ L R++DI Q YTQ
Sbjct: 65 KLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQ 124
Query: 217 NAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKT 276
+ +RP G S I YD+ G +Y ++P+G Y +KA+SVG T+ A + L+ +K
Sbjct: 125 HGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDM 184
Query: 277 NYTGDETIQLAISCL 291
D+ I+LA+ L
Sbjct: 185 KV--DDAIELALKTL 197
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 2/101 (1%)
Query: 9 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 68
+D TIFSPEGRLYQVEYA ++I+ G T++ + D V+A E+KV +L++ T T
Sbjct: 6 YDSRTTIFSPEGRLYQVEYALESISHAG-TAIGIMASDGIVLAAERKVTSTLLEQDTSTE 64
Query: 69 -LYSLTPTVGCVMTGMQADSRYQVQRARAGFDRHITIFSPE 108
LY L + + G+ AD+ + AR ++ ++ +
Sbjct: 65 KLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNED 105
>sp|O59219|PSA_PYRHO Proteasome subunit alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=psmA PE=3 SV=1
Length = 260
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 122/197 (61%), Gaps = 5/197 (2%)
Query: 95 RAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 154
+AG+DR IT+FSP+GRL+QV YA +A+ +G T+V VK + V+A EK++ L++P++
Sbjct: 7 QAGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKCNEGVVLAVEKRITSRLIEPES 65
Query: 155 VTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVY 214
++ + + +G+ AD+R V RAR EA + +G P+ + +I D+ Q++
Sbjct: 66 YEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMH 125
Query: 215 TQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
TQ +RP G ++++ NE P +Y+TDP+G Y ++KAV++G A + E+K+
Sbjct: 126 TQYGGVRPFGAALLMAGV--NEKPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKY-- 181
Query: 275 KTNYTGDETIQLAISCL 291
K + + +E I+LAI L
Sbjct: 182 KDDMSLEEAIKLAIFAL 198
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
AG+DR IT+FSP+GRL+QV YA +A+ +G T+V VK + V+A EK++ L++P++
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKCNEGVVLAVEKRITSRLIEPESY 66
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
++ + + +G+ AD+R V RAR
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVNRAR 95
>sp|Q5JIU9|PSA_PYRKO Proteasome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=psmA PE=3 SV=1
Length = 260
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 119/197 (60%), Gaps = 5/197 (2%)
Query: 95 RAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 154
+AG+DR IT+FSP+GRL+QV YA +A+ +G T+V VK D V+A EK++ L++P +
Sbjct: 7 QAGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKDGVVLAVEKRITSKLIEPSS 65
Query: 155 VTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVY 214
++ + + +G+ AD+R V RAR EA ++ +G +P+ L +I D+ Q +
Sbjct: 66 YEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAH 125
Query: 215 TQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
TQ +RP G ++++ NE P +++TDP+G Y +KAV++G A + E+ +
Sbjct: 126 TQYGGVRPFGAALLMAGV--NEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHY-- 181
Query: 275 KTNYTGDETIQLAISCL 291
+ + D+ I+LAI L
Sbjct: 182 RDDIGKDDAIKLAILAL 198
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
AG+DR IT+FSP+GRL+QV YA +A+ +G T+V VK D V+A EK++ L++P +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKDGVVLAVEKRITSKLIEPSSY 66
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
++ + + +G+ AD+R V RAR
Sbjct: 67 EKIFLIDDHIAAAPSGIIADARVLVDRAR 95
>sp|O24733|PSA_THEK1 Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA
PE=3 SV=1
Length = 260
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 119/197 (60%), Gaps = 5/197 (2%)
Query: 95 RAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 154
+AG+DR IT+FSP+GRL+QV YA +A+ +G T+V VK D V+A EK++ L++P +
Sbjct: 7 QAGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKDGVVLAVEKRITSKLIEPSS 65
Query: 155 VTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVY 214
++ + + +G+ AD+R V RAR EA ++ +G +P+ L +I D+ Q +
Sbjct: 66 YEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAH 125
Query: 215 TQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
TQ +RP G ++++ NE P +++TDP+G Y +KAV++G A + E+ +
Sbjct: 126 TQYGGVRPFGAALLMAGV--NEKPELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHY-- 181
Query: 275 KTNYTGDETIQLAISCL 291
+ + D+ I+LAI L
Sbjct: 182 RDDIGKDDAIKLAILAL 198
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
AG+DR IT+FSP+GRL+QV YA +A+ +G T+V VK D V+A EK++ L++P +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKDGVVLAVEKRITSKLIEPSSY 66
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
++ + + +G+ AD+R V RAR
Sbjct: 67 EKIFLIDDHIAAAPSGIIADARVLVDRAR 95
>sp|Q9UXC6|PSA_SULSO Proteasome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=psmA PE=3 SV=1
Length = 241
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
Query: 94 ARAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPK 153
A G+DR ITIFSP+G LYQV+YAF+A+ +G T++ +K + V+A+EK+ SL+D
Sbjct: 6 AAMGYDRAITIFSPDGSLYQVDYAFEAVKKGW-TAIGIKSKSSVVIASEKRKAQSLLDVD 64
Query: 154 TVTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQV 213
++ ++ + VGC G+ +D R + AR A + + + ID L +AD+ Q+
Sbjct: 65 SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQM 124
Query: 214 YTQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFK 273
YTQ+ +RP G ++++ D++ P ++ T+P+G Y ++AV++G A +LEK +K
Sbjct: 125 YTQHGGVRPFGVALVIAGIDKSV-PKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK 183
Query: 274 KKTNYTGDETIQLAISCL 291
+ N +ETI LA+ L
Sbjct: 184 EDLNV--EETILLALKAL 199
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 16/155 (10%)
Query: 1 MSRGSSA-GFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDS 59
M+ G +A G+DR ITIFSP+G LYQV+YAF+A+ +G T++ +K + V+A+EK+ S
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVKKGW-TAIGIKSKSSVVIASEKRKAQS 59
Query: 60 LVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRHITIFSPEGRLYQVEYAFK 119
L+D ++ ++ + VGC G+ +D R + AR +H I+ ++Y K
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEP---VSIDYLTK 116
Query: 120 AI--------NQGGVTSVAVKGVDTAVVATEKKVP 146
++ GGV GV + +K VP
Sbjct: 117 SVADVKQMYTQHGGVRPF---GVALVIAGIDKSVP 148
>sp|Q6YT00|PSA7A_ORYSJ Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. japonica
GN=Os08g0548900 PE=2 SV=1
Length = 249
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
A +DR IT+FSP+G L+QVEYA +A+ +G +V V+G DT V+ EKK L D +++
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNA-AVGVRGTDTVVLGVEKKSTPKLQDSRSM 60
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
+ SL + G++AD+R + RAR E S + + ++ + IA + Q YT
Sbjct: 61 RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYT 120
Query: 216 QNAEMRPLGCSMILISYDE-NEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
Q+ +RP G S +++ +D E P +Y+TDP+G + ++KA + G + +LEK +K
Sbjct: 121 QSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK- 179
Query: 275 KTNYTGDETIQLAISCL 291
+ +G ETI+LAI L
Sbjct: 180 --DTSGKETIKLAIRAL 194
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
A +DR IT+FSP+G L+QVEYA +A+ +G +V V+G DT V+ EKK L D +++
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNA-AVGVRGTDTVVLGVEKKSTPKLQDSRSM 60
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRH-ITIFSP 107
+ SL + G++AD+R + RAR H +T+ P
Sbjct: 61 RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDP 102
>sp|A2YXU2|PSA7A_ORYSI Proteasome subunit alpha type-7-A OS=Oryza sativa subsp. indica
GN=OsI_029135 PE=2 SV=2
Length = 249
Score = 139 bits (349), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
A +DR IT+FSP+G L+QVEYA +A+ +G +V V+G DT V+ EKK L D +++
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNA-AVGVRGTDTVVLGVEKKSTPKLQDSRSM 60
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
+ SL + G++AD+R + RAR E S + + ++ + IA + Q YT
Sbjct: 61 RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYT 120
Query: 216 QNAEMRPLGCSMILISYDE-NEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
Q+ +RP G S +++ +D E P +Y+TDP+G + ++KA + G + +LEK +K
Sbjct: 121 QSGGVRPFGLSTLIVGFDPYTEKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYK- 179
Query: 275 KTNYTGDETIQLAISCL 291
+ +G ETI+LAI L
Sbjct: 180 --DTSGKETIKLAIRAL 194
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
A +DR IT+FSP+G L+QVEYA +A+ +G +V V+G DT V+ EKK L D +++
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNA-AVGVRGTDTVVLGVEKKSTPKLQDSRSM 60
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRH-ITIFSP 107
+ SL + G++AD+R + RAR H +T+ P
Sbjct: 61 RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDP 102
>sp|Q0J006|PSA7B_ORYSJ Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. japonica
GN=PAD1 PE=2 SV=1
Length = 249
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 117/197 (59%), Gaps = 5/197 (2%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
A +DR IT+FSP+G L+QVEYA +A+ +G +V V+G DT V+ EKK L D ++V
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNA-AVGVRGSDTVVLGVEKKSTPKLQDSRSV 60
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
+ SL + G++AD+R + RAR E S + ++ ++ + IA + Q YT
Sbjct: 61 RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYT 120
Query: 216 QNAEMRPLGCSMILISYDE-NEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
Q+ +RP G S +++ +D + P +Y+TDP+G + ++KA + G + +LEK +K+
Sbjct: 121 QSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE 180
Query: 275 KTNYTGDETIQLAISCL 291
+G ETI+LAI L
Sbjct: 181 T---SGKETIKLAIRAL 194
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
A +DR IT+FSP+G L+QVEYA +A+ +G +V V+G DT V+ EKK L D ++V
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNA-AVGVRGSDTVVLGVEKKSTPKLQDSRSV 60
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRH 101
+ SL + G++AD+R + RAR H
Sbjct: 61 RKIASLDTHIALACAGLKADARVLINRARVECQSH 95
>sp|A2Z3I9|PSA7B_ORYSI Proteasome subunit alpha type-7-B OS=Oryza sativa subsp. indica
GN=PAD1 PE=2 SV=1
Length = 249
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 117/197 (59%), Gaps = 5/197 (2%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
A +DR IT+FSP+G L+QVEYA +A+ +G +V V+G DT V+ EKK L D ++V
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNA-AVGVRGSDTVVLGVEKKSTPKLQDSRSV 60
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
+ SL + G++AD+R + RAR E S + ++ ++ + IA + Q YT
Sbjct: 61 RKIASLDTHIALACAGLKADARVLINRARVECQSHRLTVEDAVTVEYITRYIAGLQQKYT 120
Query: 216 QNAEMRPLGCSMILISYDE-NEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
Q+ +RP G S +++ +D + P +Y+TDP+G + ++KA + G + +LEK +K+
Sbjct: 121 QSGGVRPFGLSTLIVGFDPYTDKPALYQTDPSGTFSAWKANATGRNSNSMREFLEKNYKE 180
Query: 275 KTNYTGDETIQLAISCL 291
+G ETI+LAI L
Sbjct: 181 T---SGKETIKLAIRAL 194
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
A +DR IT+FSP+G L+QVEYA +A+ +G +V V+G DT V+ EKK L D ++V
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNA-AVGVRGSDTVVLGVEKKSTPKLQDSRSV 60
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRH 101
+ SL + G++AD+R + RAR H
Sbjct: 61 RKIASLDTHIALACAGLKADARVLINRARVECQSH 95
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 139 bits (349), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 121/197 (61%), Gaps = 5/197 (2%)
Query: 95 RAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 154
+AG+DR IT+FSP+GRL+QV YA +A+ +G T+V VK + V+A EK++ L++P +
Sbjct: 7 QAGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKCGEGVVLAVEKRITSRLIEPDS 65
Query: 155 VTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVY 214
++ + + +G+ AD+R V RAR EA ++ +G P+ + +I D+ Q++
Sbjct: 66 YEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMH 125
Query: 215 TQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
TQ +RP G ++++ N+ P +Y+TDP+G Y ++KAV++G A + E+K++
Sbjct: 126 TQYGGVRPFGAALLMAGI--NDRPELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRD 183
Query: 275 KTNYTGDETIQLAISCL 291
N ++ I+LA+ L
Sbjct: 184 DMNL--EDAIKLALMAL 198
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
AG+DR IT+FSP+GRL+QV YA +A+ +G T+V VK + V+A EK++ L++P +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKCGEGVVLAVEKRITSRLIEPDSY 66
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
++ + + +G+ AD+R V RAR
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVNRAR 95
>sp|O24030|PSA7_SOLLC Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1
PE=2 SV=1
Length = 259
Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 117/197 (59%), Gaps = 5/197 (2%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
A +DR IT+FSP+G L+QVEYA +A+ +G +V V+G DT V+ EKK L D ++V
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYAMEAVRKGN-AAVGVRGTDTVVLGVEKKSTPKLQDSRSV 60
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
+ +L + G++AD+R V +AR E S + + ++ + IA + Q YT
Sbjct: 61 RKIVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYT 120
Query: 216 QNAEMRPLGCSMILISYDENEG-PLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
Q+ +RP G S ++I +D + G P +Y+TDP+G + ++KA + G + +LEK +K+
Sbjct: 121 QSGGVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEKNYKE 180
Query: 275 KTNYTGDETIQLAISCL 291
+G ET++LAI L
Sbjct: 181 T---SGQETVKLAIRAL 194
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 15/162 (9%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
A +DR IT+FSP+G L+QVEYA +A+ +G +V V+G DT V+ EKK L D ++V
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYAMEAVRKGN-AAVGVRGTDTVVLGVEKKSTPKLQDSRSV 60
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRH-ITIFSPEGRLYQVEYAFKAINQGG 125
+ +L + G++AD+R V +AR H +T+ P Y Y + Q
Sbjct: 61 RKIVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRY-IAGLQQKY 119
Query: 126 VTSVAVK--GVDTAVVATEKKVPDSLVDPKT-VTNLYSLTPT 164
S V+ G+ T ++ DP T V +LY P+
Sbjct: 120 TQSGGVRPFGLSTLIIG---------FDPHTGVPSLYQTDPS 152
>sp|Q8L4A7|PSA2B_ARATH Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2
PE=1 SV=1
Length = 235
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 114/190 (60%), Gaps = 4/190 (2%)
Query: 102 ITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNLYSL 161
+T FSP G+L Q+E+A A+ G TS+ +K + V+ATEKK+P LVD +V + L
Sbjct: 10 LTTFSPSGKLVQIEHALTAVGSGQ-TSLGIKASNGVVIATEKKLPSILVDEASVQKIQHL 68
Query: 162 TPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMR 221
TP +G V +GM D R V+++R +A + + +P+ QL A + Q +TQ+ +R
Sbjct: 69 TPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVR 128
Query: 222 PLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGD 281
P G S+++ YD ++GP +Y+ DP+G Y S+KA ++G + A ++LEK++ + D
Sbjct: 129 PFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMEL--D 185
Query: 282 ETIQLAISCL 291
+ I AI L
Sbjct: 186 DAIHTAILTL 195
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 13 ITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNLYSL 72
+T FSP G+L Q+E+A A+ G TS+ +K + V+ATEKK+P LVD +V + L
Sbjct: 10 LTTFSPSGKLVQIEHALTAVGSGQ-TSLGIKASNGVVIATEKKLPSILVDEASVQKIQHL 68
Query: 73 TPTVGCVMTGMQADSRYQVQRARAGFDRHITIF 105
TP +G V +GM D R V+++R ++++ ++
Sbjct: 69 TPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLY 101
>sp|Q9SXU1|PSA7_CICAR Proteasome subunit alpha type-7 OS=Cicer arietinum GN=PAD1 PE=2
SV=1
Length = 249
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 115/197 (58%), Gaps = 5/197 (2%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
A +DR IT+FSP+G L+QVEYA +A+ +G +V V+G D V+ EKK L D ++V
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGN-AAVGVRGTDNVVLGVEKKSTAKLQDTRSV 60
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
+ +L + G++AD+R + RAR E S + + ++ + IA + Q YT
Sbjct: 61 RKIVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYT 120
Query: 216 QNAEMRPLGCSMILISYDENEG-PLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
Q+ +RP G S +++ +D G P +Y+TDP+G + ++KA + G + +LEK FK+
Sbjct: 121 QSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNFKE 180
Query: 275 KTNYTGDETIQLAISCL 291
+G ET++LAI L
Sbjct: 181 T---SGQETVKLAIRAL 194
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
A +DR IT+FSP+G L+QVEYA +A+ +G +V V+G D V+ EKK L D ++V
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGN-AAVGVRGTDNVVLGVEKKSTAKLQDTRSV 60
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRH-ITIFSP 107
+ +L + G++AD+R + RAR H +T+ P
Sbjct: 61 RKIVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDP 102
>sp|Q9LSU1|PSA5_ORYSJ Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica
GN=PAE1 PE=2 SV=1
Length = 237
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Query: 95 RAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 154
R +DR + FSPEGRL+QVEYA +AI G T++ +K D V+A EK+V L++P +
Sbjct: 5 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGLKTKDGVVLAVEKRVTSPLLEPSS 63
Query: 155 VTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVY 214
V + + +GC M+G+ AD+R V+ AR E + ++ +G M ++ I D++ +
Sbjct: 64 VEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQAICDLALRF 123
Query: 215 TQNAE---MRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKK 271
+ E RP G S+++ +DEN GP +Y TDP+G + A ++G + A+S L+++
Sbjct: 124 GEGDEESMSRPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQ 182
Query: 272 FKKKTNYTGDETIQLAI 288
+ K+ ETI L+I
Sbjct: 183 YNKELTLQEAETIALSI 199
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 9 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 68
+DR + FSPEGRL+QVEYA +AI G T++ +K D V+A EK+V L++P +V
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGLKTKDGVVLAVEKRVTSPLLEPSSVEK 66
Query: 69 LYSLTPTVGCVMTGMQADSRYQVQRARAGFDRH 101
+ + +GC M+G+ AD+R V+ AR H
Sbjct: 67 IMEIDEHIGCAMSGLIADARTLVEHARVETQNH 99
>sp|O23708|PSA2A_ARATH Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1
PE=1 SV=1
Length = 235
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 114/190 (60%), Gaps = 4/190 (2%)
Query: 102 ITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNLYSL 161
+T FSP G+L Q+E+A A+ G TS+ +K + V+ATEKK+P LVD +V + L
Sbjct: 10 LTTFSPSGKLVQIEHALTAVGSGQ-TSLGIKASNGVVIATEKKLPSILVDEASVQKIQHL 68
Query: 162 TPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMR 221
TP +G V +GM D R V+++R +A + + +P+ QL A + Q +TQ+ +R
Sbjct: 69 TPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVR 128
Query: 222 PLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGD 281
P G S+++ YD ++GP +Y+ DP+G Y S+KA ++G + A ++LEK++ + D
Sbjct: 129 PFGVSLLVAGYD-DKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDMEL--D 185
Query: 282 ETIQLAISCL 291
+ I AI L
Sbjct: 186 DAIHTAILTL 195
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 13 ITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNLYSL 72
+T FSP G+L Q+E+A A+ G TS+ +K + V+ATEKK+P LVD +V + L
Sbjct: 10 LTTFSPSGKLVQIEHALTAVGSGQ-TSLGIKASNGVVIATEKKLPSILVDEASVQKIQHL 68
Query: 73 TPTVGCVMTGMQADSRYQVQRARAGFDRHITIF 105
TP +G V +GM D R V+++R ++++ ++
Sbjct: 69 TPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLY 101
>sp|C3NEC6|PSA_SULIY Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14
/ Yellowstone #1) GN=psmA PE=3 SV=1
Length = 241
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
Query: 94 ARAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPK 153
A G+DR ITIFSP+G LYQV+YAF+A+ +G T++ +K V+A+EK+ SL+D
Sbjct: 6 AAMGYDRAITIFSPDGSLYQVDYAFEAVKKGW-TAIGIKSKSGVVIASEKRKAQSLLDVD 64
Query: 154 TVTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQV 213
++ ++ + VGC G+ +D R + AR A + + + ID L +AD+ Q+
Sbjct: 65 SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQM 124
Query: 214 YTQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFK 273
YTQ+ +RP G ++++ D++ P +Y T+P+G Y ++AV++G A +LEK +K
Sbjct: 125 YTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK 183
Query: 274 KKTNYTGDETIQLAISCL 291
+ + T ++TI LA+ L
Sbjct: 184 E--DLTIEDTILLALKAL 199
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 16/155 (10%)
Query: 1 MSRGSSA-GFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDS 59
M+ G +A G+DR ITIFSP+G LYQV+YAF+A+ +G T++ +K V+A+EK+ S
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVKKGW-TAIGIKSKSGVVIASEKRKAQS 59
Query: 60 LVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRHITIFSPEGRLYQVEYAFK 119
L+D ++ ++ + VGC G+ +D R + AR +H I+ ++Y K
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEP---VSIDYLTK 116
Query: 120 AI--------NQGGVTSVAVKGVDTAVVATEKKVP 146
++ GGV GV + +K VP
Sbjct: 117 SVADVKQMYTQHGGVRPF---GVALVIAGIDKSVP 148
>sp|C3NHC6|PSA_SULIN Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51
/ Yellowstone #2) GN=psmA PE=3 SV=1
Length = 241
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
Query: 94 ARAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPK 153
A G+DR ITIFSP+G LYQV+YAF+A+ +G T++ +K V+A+EK+ SL+D
Sbjct: 6 AAMGYDRAITIFSPDGSLYQVDYAFEAVKKGW-TAIGIKSKSGVVIASEKRKAQSLLDVD 64
Query: 154 TVTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQV 213
++ ++ + VGC G+ +D R + AR A + + + ID L +AD+ Q+
Sbjct: 65 SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQM 124
Query: 214 YTQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFK 273
YTQ+ +RP G ++++ D++ P +Y T+P+G Y ++AV++G A +LEK +K
Sbjct: 125 YTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK 183
Query: 274 KKTNYTGDETIQLAISCL 291
+ + T ++TI LA+ L
Sbjct: 184 E--DLTIEDTILLALKAL 199
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 16/155 (10%)
Query: 1 MSRGSSA-GFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDS 59
M+ G +A G+DR ITIFSP+G LYQV+YAF+A+ +G T++ +K V+A+EK+ S
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVKKGW-TAIGIKSKSGVVIASEKRKAQS 59
Query: 60 LVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRHITIFSPEGRLYQVEYAFK 119
L+D ++ ++ + VGC G+ +D R + AR +H I+ ++Y K
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEP---VSIDYLTK 116
Query: 120 AI--------NQGGVTSVAVKGVDTAVVATEKKVP 146
++ GGV GV + +K VP
Sbjct: 117 SVADVKQMYTQHGGVRPF---GVALVIAGIDKSVP 148
>sp|C3MVG1|PSA_SULIM Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=psmA PE=3 SV=1
Length = 241
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
Query: 94 ARAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPK 153
A G+DR ITIFSP+G LYQV+YAF+A+ +G T++ +K V+A+EK+ SL+D
Sbjct: 6 AAMGYDRAITIFSPDGSLYQVDYAFEAVKKGW-TAIGIKSKSGVVIASEKRKAQSLLDVD 64
Query: 154 TVTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQV 213
++ ++ + VGC G+ +D R + AR A + + + ID L +AD+ Q+
Sbjct: 65 SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQM 124
Query: 214 YTQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFK 273
YTQ+ +RP G ++++ D++ P +Y T+P+G Y ++AV++G A +LEK +K
Sbjct: 125 YTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK 183
Query: 274 KKTNYTGDETIQLAISCL 291
+ + T ++TI LA+ L
Sbjct: 184 E--DLTIEDTILLALKAL 199
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 16/155 (10%)
Query: 1 MSRGSSA-GFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDS 59
M+ G +A G+DR ITIFSP+G LYQV+YAF+A+ +G T++ +K V+A+EK+ S
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVKKGW-TAIGIKSKSGVVIASEKRKAQS 59
Query: 60 LVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRHITIFSPEGRLYQVEYAFK 119
L+D ++ ++ + VGC G+ +D R + AR +H I+ ++Y K
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEP---VSIDYLTK 116
Query: 120 AI--------NQGGVTSVAVKGVDTAVVATEKKVP 146
++ GGV GV + +K VP
Sbjct: 117 SVADVKQMYTQHGGVRPF---GVALVIAGIDKSVP 148
>sp|C3MQ43|PSA_SULIL Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=psmA PE=3 SV=1
Length = 241
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
Query: 94 ARAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPK 153
A G+DR ITIFSP+G LYQV+YAF+A+ +G T++ +K V+A+EK+ SL+D
Sbjct: 6 AAMGYDRAITIFSPDGSLYQVDYAFEAVKKGW-TAIGIKSKSGVVIASEKRKAQSLLDVD 64
Query: 154 TVTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQV 213
++ ++ + VGC G+ +D R + AR A + + + ID L +AD+ Q+
Sbjct: 65 SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQM 124
Query: 214 YTQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFK 273
YTQ+ +RP G ++++ D++ P +Y T+P+G Y ++AV++G A +LEK +K
Sbjct: 125 YTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK 183
Query: 274 KKTNYTGDETIQLAISCL 291
+ + T ++TI LA+ L
Sbjct: 184 E--DLTIEDTILLALKAL 199
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 16/155 (10%)
Query: 1 MSRGSSA-GFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDS 59
M+ G +A G+DR ITIFSP+G LYQV+YAF+A+ +G T++ +K V+A+EK+ S
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVKKGW-TAIGIKSKSGVVIASEKRKAQS 59
Query: 60 LVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRHITIFSPEGRLYQVEYAFK 119
L+D ++ ++ + VGC G+ +D R + AR +H I+ ++Y K
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEP---VSIDYLTK 116
Query: 120 AI--------NQGGVTSVAVKGVDTAVVATEKKVP 146
++ GGV GV + +K VP
Sbjct: 117 SVADVKQMYTQHGGVRPF---GVALVIAGIDKSVP 148
>sp|C4KHD9|PSA_SULIK Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=psmA PE=3 SV=1
Length = 241
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
Query: 94 ARAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPK 153
A G+DR ITIFSP+G LYQV+YAF+A+ +G T++ +K V+A+EK+ SL+D
Sbjct: 6 AAMGYDRAITIFSPDGSLYQVDYAFEAVKKGW-TAIGIKSKSGVVIASEKRKAQSLLDVD 64
Query: 154 TVTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQV 213
++ ++ + VGC G+ +D R + AR A + + + ID L +AD+ Q+
Sbjct: 65 SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQM 124
Query: 214 YTQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFK 273
YTQ+ +RP G ++++ D++ P +Y T+P+G Y ++AV++G A +LEK +K
Sbjct: 125 YTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK 183
Query: 274 KKTNYTGDETIQLAISCL 291
+ + T ++TI LA+ L
Sbjct: 184 E--DLTIEDTILLALKAL 199
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 16/155 (10%)
Query: 1 MSRGSSA-GFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDS 59
M+ G +A G+DR ITIFSP+G LYQV+YAF+A+ +G T++ +K V+A+EK+ S
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVKKGW-TAIGIKSKSGVVIASEKRKAQS 59
Query: 60 LVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRHITIFSPEGRLYQVEYAFK 119
L+D ++ ++ + VGC G+ +D R + AR +H I+ ++Y K
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEP---VSIDYLTK 116
Query: 120 AI--------NQGGVTSVAVKGVDTAVVATEKKVP 146
++ GGV GV + +K VP
Sbjct: 117 SVADVKQMYTQHGGVRPF---GVALVIAGIDKSVP 148
>sp|C3N5R0|PSA_SULIA Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.27)
GN=psmA PE=3 SV=1
Length = 241
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
Query: 94 ARAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPK 153
A G+DR ITIFSP+G LYQV+YAF+A+ +G T++ +K V+A+EK+ SL+D
Sbjct: 6 AAMGYDRAITIFSPDGSLYQVDYAFEAVKKGW-TAIGIKSKSGVVIASEKRKAQSLLDVD 64
Query: 154 TVTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQV 213
++ ++ + VGC G+ +D R + AR A + + + ID L +AD+ Q+
Sbjct: 65 SIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQM 124
Query: 214 YTQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFK 273
YTQ+ +RP G ++++ D++ P +Y T+P+G Y ++AV++G A +LEK +K
Sbjct: 125 YTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK 183
Query: 274 KKTNYTGDETIQLAISCL 291
+ + T ++TI LA+ L
Sbjct: 184 E--DLTIEDTILLALKAL 199
Score = 81.3 bits (199), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 16/155 (10%)
Query: 1 MSRGSSA-GFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDS 59
M+ G +A G+DR ITIFSP+G LYQV+YAF+A+ +G T++ +K V+A+EK+ S
Sbjct: 1 MAFGPAAMGYDRAITIFSPDGSLYQVDYAFEAVKKGW-TAIGIKSKSGVVIASEKRKAQS 59
Query: 60 LVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRHITIFSPEGRLYQVEYAFK 119
L+D ++ ++ + VGC G+ +D R + AR +H I+ ++Y K
Sbjct: 60 LLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEP---VSIDYLTK 116
Query: 120 AI--------NQGGVTSVAVKGVDTAVVATEKKVP 146
++ GGV GV + +K VP
Sbjct: 117 SVADVKQMYTQHGGVRPF---GVALVIAGIDKSVP 148
>sp|C5A2C2|PSA_THEGJ Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1
Length = 260
Score = 136 bits (343), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Query: 95 RAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 154
+AG+DR IT+FSP+GRL+QV YA +A+ +G T+V VK V+A EK++ L++P +
Sbjct: 7 QAGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKGGVVLAVEKRITSRLIEPSS 65
Query: 155 VTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVY 214
++ + + +G+ AD+R V RAR EA ++ +G +P+ L +I D+ Q +
Sbjct: 66 YEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAH 125
Query: 215 TQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
TQ +RP G ++++ NE P +Y+TDP+G Y +KAV++G A + E+ +
Sbjct: 126 TQYGGVRPFGAALLMAGV--NEKPELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSD 183
Query: 275 KTNYTGDETIQLAISCL 291
+ G I+LAI L
Sbjct: 184 DIDMEG--AIKLAILAL 198
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
AG+DR IT+FSP+GRL+QV YA +A+ +G T+V VK V+A EK++ L++P +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKGGVVLAVEKRITSRLIEPSSY 66
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
++ + + +G+ AD+R V RAR
Sbjct: 67 EKIFQIDDHIAAAPSGIIADARVLVDRAR 95
>sp|P34120|PSA7_DICDI Proteasome subunit alpha type-7 OS=Dictyostelium discoideum
GN=psmA7 PE=3 SV=1
Length = 250
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 115/196 (58%), Gaps = 4/196 (2%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
A +DR IT+FSP+G L+QVEYA +A+ +G V +V V+G D V+ EKK L D +++
Sbjct: 4 ARYDRAITVFSPDGHLFQVEYAMEAVRKGTV-AVGVRGKDVIVLGVEKKATAKLQDARSI 62
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
+ L + G+ ADSR + +A E S++ S ++ + IA I Q YT
Sbjct: 63 RKIVKLDDHICLTFAGLTADSRVLISKALMECQSYRLTVEDSPSVEYISKFIAGIQQRYT 122
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
Q+ +RP G S +++ +D + P +Y+TDP+G Y S+KA ++G + +LEK +
Sbjct: 123 QSGGVRPFGISTLIVGFDTDGTPNLYQTDPSGSYSSWKAAAIGRSSKSVGEFLEKNY--- 179
Query: 276 TNYTGDETIQLAISCL 291
T+ + +E+I+LA+ L
Sbjct: 180 TDVSEEESIKLAVRAL 195
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 5 SSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPK 64
SSA +DR IT+FSP+G L+QVEYA +A+ +G V +V V+G D V+ EKK L D +
Sbjct: 2 SSARYDRAITVFSPDGHLFQVEYAMEAVRKGTV-AVGVRGKDVIVLGVEKKATAKLQDAR 60
Query: 65 TVTNLYSLTPTVGCVMTGMQADSRYQVQRA 94
++ + L + G+ ADSR + +A
Sbjct: 61 SIRKIVKLDDHICLTFAGLTADSRVLISKA 90
>sp|A6VIP0|PSA_METM7 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=psmA PE=3 SV=1
Length = 259
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 117/196 (59%), Gaps = 4/196 (2%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
+G+DR ITIFSPEGRLYQVEYA +A+ +G T+V +K D V+A ++++ L+D ++
Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRG-TTAVGIKCKDGVVLAVDRRITSKLIDVSSI 66
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
++ + + +G+ AD+R + RAR EA + +G ++ ++ L +I DI Q YT
Sbjct: 67 EKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYT 126
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
Q+ RP G ++++ D + L ++TDP+G +KA ++G A LE K+ +
Sbjct: 127 QHGGARPFGLALLITGIDRHSARL-FETDPSGALIEYKATAIGSGRPIAMEVLESKYDE- 184
Query: 276 TNYTGDETIQLAISCL 291
N T +E ++LA+ L
Sbjct: 185 -NMTVNEGMELALYAL 199
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 6 SAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 65
++G+DR ITIFSPEGRLYQVEYA +A+ + G T+V +K D V+A ++++ L+D +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSS 65
Query: 66 VTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
+ ++ + + +G+ AD+R + RAR
Sbjct: 66 IEKIFQIDDHIVAATSGLVADARVLIDRAR 95
>sp|O24616|PSA7B_ARATH Proteasome subunit alpha type-7-B OS=Arabidopsis thaliana GN=PAD2
PE=1 SV=2
Length = 250
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
A +DR IT+FSP+G L+QVEYA +A+ +G +V V+G DT V+A EKK L D ++
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNA-AVGVRGTDTVVLAVEKKSTPKLQDSRSA 60
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
+ SL + G++AD+R + +AR E S + + ++ + IA + Q YT
Sbjct: 61 RKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYT 120
Query: 216 QNAEMRPLGCSMILISYDE-NEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
Q+ +RP G S +++ +D + P +Y+TDP+G + ++KA + G + +LEK +K+
Sbjct: 121 QSGGVRPFGLSTLIVGFDPYSRLPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKE 180
Query: 275 KTNYTGDETIQLAISCL 291
+G ETI+LAI L
Sbjct: 181 S---SGQETIKLAIRAL 194
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 61/102 (59%), Gaps = 2/102 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
A +DR IT+FSP+G L+QVEYA +A+ +G +V V+G DT V+A EKK L D ++
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKGNA-AVGVRGTDTVVLAVEKKSTPKLQDSRSA 60
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRH-ITIFSP 107
+ SL + G++AD+R + +AR H +T+ P
Sbjct: 61 RKIVSLDNHIALACAGLKADARVLINKARIECQSHRLTLEDP 102
>sp|Q5RDH8|PSA7_PONAB Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2
Length = 248
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 111/194 (57%), Gaps = 1/194 (0%)
Query: 98 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 157
+DR IT+FSP+G L+QVEYA +AI +G T+V V+G D V+ EKK L D +TV
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAIKKGS-TAVGVRGRDIVVLGVEKKSVAKLQDERTVRK 61
Query: 158 LYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQN 217
+ +L V G+ AD+R + RAR E S + S+ ++ + IA + Q YTQ+
Sbjct: 62 ICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDSVTVEYITRYIASLKQRYTQS 121
Query: 218 AEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKTN 277
RP G S +++ +D + P +Y+TDP+G Y ++KA ++G +LEK + +
Sbjct: 122 NGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAI 181
Query: 278 YTGDETIQLAISCL 291
T D TI+L I L
Sbjct: 182 ETDDLTIKLVIKAL 195
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 9 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 68
+DR IT+FSP+G L+QVEYA +AI +G T+V V+G D V+ EKK L D +TV
Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAIKKGS-TAVGVRGRDIVVLGVEKKSVAKLQDERTVRK 61
Query: 69 LYSLTPTVGCVMTGMQADSRYQVQRARAGFDRH 101
+ +L V G+ AD+R + RAR H
Sbjct: 62 ICALDDNVCMAFAGLTADARIVINRARVECQSH 94
>sp|B6YSH9|PSA_THEON Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1)
GN=psmA PE=3 SV=1
Length = 260
Score = 135 bits (340), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Query: 95 RAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 154
+AG+DR IT+FSP+GRL+QV YA +A+ +G T+V VK + V+A EK++ L++P +
Sbjct: 7 QAGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKEGVVLAVEKRITSKLIEPSS 65
Query: 155 VTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVY 214
++ + + +G+ AD+R V RAR EA ++ +G +P+ L +I D+ Q +
Sbjct: 66 YEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAH 125
Query: 215 TQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
TQ +RP G ++++ N+ P +Y+TDP+G Y ++AV++G A + E +
Sbjct: 126 TQYGGVRPFGAALLMAGV--NDKPELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSD 183
Query: 275 KTNYTGDETIQLAISCL 291
+ G I+LAI L
Sbjct: 184 DLDMEG--AIKLAILAL 198
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
AG+DR IT+FSP+GRL+QV YA +A+ +G T+V VK + V+A EK++ L++P +
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGA-TAVGVKWKEGVVLAVEKRITSKLIEPSSY 66
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
++ + + +G+ AD+R V RAR
Sbjct: 67 EKIFQIDDHIAAAPSGIIADARVLVDRAR 95
>sp|Q6M0L9|PSA_METMP Proteasome subunit alpha OS=Methanococcus maripaludis (strain S2 /
LL) GN=psmA PE=3 SV=1
Length = 259
Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 116/196 (59%), Gaps = 4/196 (2%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
+G+DR ITIFSPEGRLYQVEYA +A+ +G T+V +K D V+A ++++ L+D ++
Sbjct: 8 SGYDRAITIFSPEGRLYQVEYAREAVRRG-TTAVGIKCKDGVVLAVDRRITSKLIDVSSI 66
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
++ + + +G+ AD+R + RAR EA + +G ++ ++ L +I DI Q YT
Sbjct: 67 EKIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYT 126
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
Q+ RP G ++++ D + L ++TDP+G +KA ++G A LE K+ +
Sbjct: 127 QHGGARPFGLALLITGIDRHSARL-FETDPSGALIEYKATAIGSGRPIAMEVLESKYDE- 184
Query: 276 TNYTGDETIQLAISCL 291
N T E ++LA+ L
Sbjct: 185 -NMTVSEGMELALYAL 199
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 6 SAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 65
++G+DR ITIFSPEGRLYQVEYA +A+ + G T+V +K D V+A ++++ L+D +
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSS 65
Query: 66 VTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
+ ++ + + +G+ AD+R + RAR
Sbjct: 66 IEKIFQIDDHIVAATSGLVADARVLIDRAR 95
>sp|O81149|PSA5A_ARATH Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1
PE=1 SV=1
Length = 237
Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 116/197 (58%), Gaps = 5/197 (2%)
Query: 95 RAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 154
R +DR + FSPEGRL+QVEYA +AI G T++ VK + V+A EK++ L++P +
Sbjct: 5 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGVKTKEGVVLAVEKRITSPLLEPSS 63
Query: 155 VTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVY 214
V + + +GC M+G+ AD+R V+ AR E + ++ +G M ++ + D++ +
Sbjct: 64 VEKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRF 123
Query: 215 TQNAE---MRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKK 271
+ E RP G S+++ +DEN GP +Y TDP+G + A ++G + A+S L+++
Sbjct: 124 GEGEEESMSRPFGVSLLIAGHDEN-GPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQ 182
Query: 272 FKKKTNYTGDETIQLAI 288
F K + ETI ++I
Sbjct: 183 FNKDLSLQEAETIAVSI 199
Score = 82.0 bits (201), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 9 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 68
+DR + FSPEGRL+QVEYA +AI G T++ VK + V+A EK++ L++P +V
Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGS-TAIGVKTKEGVVLAVEKRITSPLLEPSSVEK 66
Query: 69 LYSLTPTVGCVMTGMQADSRYQVQRARAGFDRH 101
+ + +GC M+G+ AD+R V+ AR H
Sbjct: 67 IMEIDDHIGCAMSGLIADARTLVEHARVETQNH 99
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,989,576
Number of Sequences: 539616
Number of extensions: 3996516
Number of successful extensions: 10758
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 9976
Number of HSP's gapped (non-prelim): 473
length of query: 291
length of database: 191,569,459
effective HSP length: 116
effective length of query: 175
effective length of database: 128,974,003
effective search space: 22570450525
effective search space used: 22570450525
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)