RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy8777
(291 letters)
>d1irua_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 244
Score = 212 bits (541), Expect = 4e-69
Identities = 141/196 (71%), Positives = 167/196 (85%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
AGFDRHITIFSPEGRLYQVEYAFKAINQGG+TSVAV+G D AV+ T+KKVPD L+D TV
Sbjct: 6 AGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTV 65
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
T+L+ +T +GCVMTGM ADSR QVQRARYEAA++KYK+GY +P+D LC RIADISQVYT
Sbjct: 66 THLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYT 125
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
QNAEMRPLGC MILI DE +GP +YK DPAGYYC FKA + GVK TE+ S+LEKK KKK
Sbjct: 126 QNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLEKKVKKK 185
Query: 276 TNYTGDETIQLAISCL 291
++T ++T++ AI+CL
Sbjct: 186 FDWTFEQTVETAITCL 201
Score = 133 bits (336), Expect = 2e-38
Identities = 74/94 (78%), Positives = 83/94 (88%)
Query: 2 SRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLV 61
SRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGG+TSVAV+G D AV+ T+KKVPD L+
Sbjct: 1 SRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLL 60
Query: 62 DPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
D TVT+L+ +T +GCVMTGM ADSR QVQRAR
Sbjct: 61 DSSTVTHLFKITENIGCVMTGMTADSRSQVQRAR 94
>d1rypa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 243
Score = 202 bits (514), Expect = 5e-65
Identities = 103/201 (51%), Positives = 137/201 (68%), Gaps = 5/201 (2%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
AG+DRHITIFSPEGRLYQVEYAFKA NQ + S+AV+G D VV ++KKVPD L+DP TV
Sbjct: 1 AGYDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTV 60
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
+ ++ ++ T+G V+ G D+R RA+ EAA F+YK+GY MP D L R+A++SQ+YT
Sbjct: 61 SYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYT 120
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
Q A MRPLG + +S DE GP IYKTDPAGYY +KA + G K E + LE FKK
Sbjct: 121 QRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKS 180
Query: 276 -----TNYTGDETIQLAISCL 291
+ ++ ++ AI+ +
Sbjct: 181 KIDHINEESWEKVVEFAITHM 201
Score = 118 bits (296), Expect = 1e-32
Identities = 52/90 (57%), Positives = 68/90 (75%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
AG+DRHITIFSPEGRLYQVEYAFKA NQ + S+AV+G D VV ++KKVPD L+DP TV
Sbjct: 1 AGYDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTV 60
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRARA 96
+ ++ ++ T+G V+ G D+R RA+A
Sbjct: 61 SYIFCISRTIGMVVNGPIPDARNAALRAKA 90
>d1irug_ d.153.1.4 (G:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 245
Score = 197 bits (503), Expect = 2e-63
Identities = 61/196 (31%), Positives = 102/196 (52%), Gaps = 3/196 (1%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
G+D + FSP+GR++QVEYA KA+ T++ ++ D V EK V L + +
Sbjct: 5 TGYDLSASTFSPDGRVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKLYEEGSN 63
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
L+++ VG + G+ AD+R AR EA++F+ GY++P+ L +R+A YT
Sbjct: 64 KRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYT 123
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKK 275
+ +RP GCS +L SY N+G +Y DP+G + ++G A + +EK K
Sbjct: 124 LYSAVRPFGCSFMLGSYSVNDGAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIEKLQMK- 182
Query: 276 TNYTGDETIQLAISCL 291
T + ++ +
Sbjct: 183 -EMTCRDIVKEVAKII 197
Score = 115 bits (290), Expect = 1e-31
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 1/95 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
G+D + FSP+GR++QVEYA KA+ T++ ++ D V EK V L + +
Sbjct: 5 TGYDLSASTFSPDGRVFQVEYAMKAVENSS-TAIGIRCKDGVVFGVEKLVLSKLYEEGSN 63
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRARAGFDRH 101
L+++ VG + G+ AD+R AR
Sbjct: 64 KRLFNVDRHVGMAVAGLLADARSLADIAREEASNF 98
>d1irud_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 243
Score = 194 bits (493), Expect = 7e-62
Identities = 71/194 (36%), Positives = 110/194 (56%), Gaps = 1/194 (0%)
Query: 98 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 157
+DR IT+FSP+G L+QVEYA +A+ +G T+V V+G D V+ EKK L D +TV
Sbjct: 2 YDRAITVFSPDGHLFQVEYAQEAVKKGS-TAVGVRGRDIVVLGVEKKSVAKLQDERTVRK 60
Query: 158 LYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQN 217
+ +L V G+ AD+R + RAR E S + + ++ + IA + Q YTQ+
Sbjct: 61 ICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQS 120
Query: 218 AEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKTN 277
RP G S +++ +D + P +Y+TDP+G Y ++KA ++G +LEK + +
Sbjct: 121 NGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAI 180
Query: 278 YTGDETIQLAISCL 291
T D TI+L I L
Sbjct: 181 ETDDLTIKLVIKAL 194
Score = 107 bits (269), Expect = 1e-28
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 9 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 68
+DR IT+FSP+G L+QVEYA +A+ +G T+V V+G D V+ EKK L D +TV
Sbjct: 2 YDRAITVFSPDGHLFQVEYAQEAVKKGS-TAVGVRGRDIVVLGVEKKSVAKLQDERTVRK 60
Query: 69 LYSLTPTVGCVMTGMQADSRYQVQRARA 96
+ +L V G+ AD+R + RAR
Sbjct: 61 ICALDDNVCMAFAGLTADARIVINRARV 88
>d1rypg_ d.153.1.4 (G:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 244
Score = 190 bits (484), Expect = 1e-60
Identities = 64/197 (32%), Positives = 97/197 (49%), Gaps = 3/197 (1%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
G+D ++FSP+GR +QVEYA KA+ G TS+ +K D V A EK + L+ P+
Sbjct: 2 TGYDLSNSVFSPDGRNFQVEYAVKAVENGT-TSIGIKCNDGVVFAVEKLITSKLLVPQKN 60
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
+ + +GCV +G+ D R+ V R R EAASFK + +PI +R+ Q +T
Sbjct: 61 VKIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYVQAHT 120
Query: 216 QNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK- 274
+RP G S I D G +Y +P+G Y +K + G A + LEK
Sbjct: 121 LYNSVRPFGVSTIFGGVD-KNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLVDHH 179
Query: 275 KTNYTGDETIQLAISCL 291
+ E ++ A +
Sbjct: 180 PEGLSAREAVKQAAKII 196
Score = 107 bits (269), Expect = 1e-28
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 7 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 66
G+D ++FSP+GR +QVEYA KA+ G TS+ +K D V A EK + L+ P+
Sbjct: 2 TGYDLSNSVFSPDGRNFQVEYAVKAVENGT-TSIGIKCNDGVVFAVEKLITSKLLVPQKN 60
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRARA 96
+ + +GCV +G+ D R+ V R R
Sbjct: 61 VKIQVVDRHIGCVYSGLIPDGRHLVNRGRE 90
>d1iruf_ d.153.1.4 (F:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 238
Score = 184 bits (467), Expect = 5e-58
Identities = 52/194 (26%), Positives = 99/194 (51%), Gaps = 4/194 (2%)
Query: 98 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 157
+D +T++SP+GR++Q+EYA +A+ QG +V +K AV+ K+ L
Sbjct: 3 YDNDVTVWSPQGRIHQIEYAMEAVKQGS-ATVGLKSKTHAVLVALKRAQSELAA--HQKK 59
Query: 158 LYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQN 217
+ + +G + G+ AD+R R E ++ +P+ +L + I +Q+ TQ
Sbjct: 60 ILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQR 119
Query: 218 AEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKTN 277
RP G +++ YD+ GP I++T P+ Y +A+S+G ++ A +YLE+ +
Sbjct: 120 YGRRPYGVGLLIAGYDDM-GPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFME 178
Query: 278 YTGDETIQLAISCL 291
+E ++ + L
Sbjct: 179 CNLNELVKHGLRAL 192
Score = 100 bits (250), Expect = 6e-26
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 9 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 68
+D +T++SP+GR++Q+EYA +A+ QG +V +K AV+ K+ L
Sbjct: 3 YDNDVTVWSPQGRIHQIEYAMEAVKQGS-ATVGLKSKTHAVLVALKRAQSELAA--HQKK 59
Query: 69 LYSLTPTVGCVMTGMQADSRYQVQRARA 96
+ + +G + G+ AD+R R
Sbjct: 60 ILHVDNHIGISIAGLTADARLLCNFMRQ 87
>d1rypd_ d.153.1.4 (D:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 241
Score = 183 bits (465), Expect = 1e-57
Identities = 63/198 (31%), Positives = 113/198 (57%), Gaps = 4/198 (2%)
Query: 97 GFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDP-KTV 155
G+DR ++IFSP+G ++QVEYA +A+ +G +V VKG + V+ E++ L D T
Sbjct: 1 GYDRALSIFSPDGHIFQVEYALEAVKRGT-CAVGVKGKNCVVLGCERRSTLKLQDTRITP 59
Query: 156 TNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYT 215
+ + + V +G+ ADSR +++AR EA S + + ++ L +A + Q YT
Sbjct: 60 SKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYT 119
Query: 216 QNAEMRPLGCSMILISYD-ENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFK- 273
Q+ +RP G S ++ +D ++ P +Y+T+P+G Y S+ A ++G + +LEK +
Sbjct: 120 QSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDR 179
Query: 274 KKTNYTGDETIQLAISCL 291
K+ T +E ++L + L
Sbjct: 180 KEPPATVEECVKLTVRSL 197
Score = 105 bits (263), Expect = 8e-28
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 8 GFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDP-KTV 66
G+DR ++IFSP+G ++QVEYA +A+ +G +V VKG + V+ E++ L D T
Sbjct: 1 GYDRALSIFSPDGHIFQVEYALEAVKRGT-CAVGVKGKNCVVLGCERRSTLKLQDTRITP 59
Query: 67 TNLYSLTPTVGCVMTGMQADSRYQVQRARA 96
+ + + V +G+ ADSR +++AR
Sbjct: 60 SKVSKIDSHVVLSFSGLNADSRILIEKARV 89
>d1iruc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 250
Score = 182 bits (463), Expect = 3e-57
Identities = 65/197 (32%), Positives = 104/197 (52%), Gaps = 3/197 (1%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
+D TIFSPEGRLYQVEYA +AI G T + + D ++A E++ L+D
Sbjct: 2 RRYDSRTTIFSPEGRLYQVEYAMEAIGHAG-TCLGILANDGVLLAAERRNIHKLLDEVFF 60
Query: 156 TN-LYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVY 214
+ +Y L + C + G+ +D+ R A + ++ +P +QL + DI Q Y
Sbjct: 61 SEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAY 120
Query: 215 TQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
TQ RP G S++ I +D++ G +Y++DP+G Y +KA +G + A S L++ +K+
Sbjct: 121 TQFGGKRPFGVSLLYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKE 180
Query: 275 KTNYTGDETIQLAISCL 291
T + LAI L
Sbjct: 181 G-EMTLKSALALAIKVL 196
Score = 110 bits (275), Expect = 2e-29
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 6 SAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 65
S +D TIFSPEGRLYQVEYA +AI G T + + D ++A E++ L+D
Sbjct: 1 SRRYDSRTTIFSPEGRLYQVEYAMEAIGHAG-TCLGILANDGVLLAAERRNIHKLLDEVF 59
Query: 66 VTN-LYSLTPTVGCVMTGMQADSRYQVQRARAGFDRHITIFSPEGRLYQVEYAFKAINQG 124
+ +Y L + C + G+ +D+ R R++ + Q+ A I Q
Sbjct: 60 FSEKIYKLNEDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQA 119
>d1irue_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 234
Score = 180 bits (459), Expect = 7e-57
Identities = 53/199 (26%), Positives = 109/199 (54%), Gaps = 9/199 (4%)
Query: 98 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 157
+DR + FSPEGRL+QVEY +AI G T++ ++ + +A EK++ L++P ++
Sbjct: 1 YDRGVNTFSPEGRLFQVEYDIEAIKLGS-TAIGIQTSEGVCLAVEKRITSPLMEPSSIEK 59
Query: 158 LYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQN 217
+ + +GC M+G+ AD++ + +AR E + + + +M ++ + +++++ + +
Sbjct: 60 IVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEE 119
Query: 218 -----AEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKF 272
A RP G +++ DE GP ++ DP+G + A ++G + A S L++ +
Sbjct: 120 DADPGAMSRPFGVALLFGGVDEK-GPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQELY 178
Query: 273 KKKTNYTGDETIQLAISCL 291
K + T E I+ ++ L
Sbjct: 179 HK--SMTLKEAIKSSLIIL 195
Score = 108 bits (272), Expect = 3e-29
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 8/145 (5%)
Query: 9 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 68
+DR + FSPEGRL+QVEY +AI G T++ ++ + +A EK++ L++P ++
Sbjct: 1 YDRGVNTFSPEGRLFQVEYDIEAIKLGS-TAIGIQTSEGVCLAVEKRITSPLMEPSSIEK 59
Query: 69 LYSLTPTVGCVMTGMQADSRYQVQRARAG-------FDRHITIFSPEGRLYQVEYAFKAI 121
+ + +GC M+G+ AD++ + +AR ++ +T+ S + + F
Sbjct: 60 IVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEE 119
Query: 122 NQGGVTSVAVKGVDTAVVATEKKVP 146
+ GV ++K P
Sbjct: 120 DADPGAMSRPFGVALLFGGVDEKGP 144
>d1rypb_ d.153.1.4 (B:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 250
Score = 180 bits (457), Expect = 2e-56
Identities = 67/195 (34%), Positives = 110/195 (56%), Gaps = 4/195 (2%)
Query: 98 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 157
+ +T FSP G+L Q++YA A+ QG TS+ +K + V+ATEKK L +T++
Sbjct: 5 YSFSLTTFSPSGKLGQIDYALTAVKQGV-TSLGIKATNGVVIATEKKSSSPLAMSETLSK 63
Query: 158 LYSLTPTVGCVMTGMQADSRYQVQRARYEAA-SFKYKHGYSMPIDQLCNRIADISQVYTQ 216
+ LTP +G V +GM D R V ++R A S+K +G P L + +A I Q TQ
Sbjct: 64 VSLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQEATQ 123
Query: 217 NAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKT 276
+ +RP G S+++ +DE G +Y+ DP+G Y +KA ++G + A ++LEK++
Sbjct: 124 SGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWND-- 181
Query: 277 NYTGDETIQLAISCL 291
++ I +A+ L
Sbjct: 182 ELELEDAIHIALLTL 196
Score = 106 bits (265), Expect = 5e-28
Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Query: 6 SAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 65
+ + +T FSP G+L Q++YA A+ QG TS+ +K + V+ATEKK L +T
Sbjct: 2 TDRYSFSLTTFSPSGKLGQIDYALTAVKQGV-TSLGIKATNGVVIATEKKSSSPLAMSET 60
Query: 66 VTNLYSLTPTVGCVMTGMQADSRYQVQRARA 96
++ + LTP +G V +GM D R V ++R
Sbjct: 61 LSKVSLLTPDIGAVYSGMGPDYRVLVDKSRK 91
>d1rypf_ d.153.1.4 (F:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 178 bits (452), Expect = 7e-56
Identities = 49/199 (24%), Positives = 86/199 (43%), Gaps = 6/199 (3%)
Query: 95 RAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 154
R +D FSP GRL+QVEYA +AI QG +V ++ AV+ K+ D L
Sbjct: 2 RNNYDGDTVTFSPTGRLFQVEYALEAIKQGS-VTVGLRSNTHAVLVALKRNADELSS--Y 58
Query: 155 VTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVY 214
+ +G + G+ D+R R + + +++ + + D +Q
Sbjct: 59 QKKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKN 118
Query: 215 TQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
TQ+ RP G +++I YD G + + P+G ++G ++ A +YLE+
Sbjct: 119 TQSYGGRPYGVGLLIIGYD-KSGAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDT 177
Query: 275 KTNY--TGDETIQLAISCL 291
DE I+ + +
Sbjct: 178 FIKIDGNPDELIKAGVEAI 196
Score = 103 bits (259), Expect = 3e-27
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 9 FDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTN 68
+D FSP GRL+QVEYA +AI QG +V ++ AV+ K+ D L
Sbjct: 5 YDGDTVTFSPTGRLFQVEYALEAIKQGS-VTVGLRSNTHAVLVALKRNADELSS--YQKK 61
Query: 69 LYSLTPTVGCVMTGMQADSRYQVQRARAGFDRH 101
+ +G + G+ D+R R +
Sbjct: 62 IIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYS 94
>d1yara1 d.153.1.4 (A:13-233) Proteasome alpha subunit
(non-catalytic) {Archaeon Thermoplasma acidophilum
[TaxId: 2303]}
Length = 221
Score = 174 bits (441), Expect = 2e-54
Identities = 65/189 (34%), Positives = 106/189 (56%), Gaps = 4/189 (2%)
Query: 103 TIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNLYSLT 162
T+FSP+GRL+QVEYA +A+ +G T++ +K + ++ ++KKV L++ ++ + +
Sbjct: 1 TVFSPDGRLFQVEYAREAVKKGS-TALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLID 59
Query: 163 PTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRP 222
V V +G+ AD+R V AR A K +G + I+ L R+AD Q YTQ +RP
Sbjct: 60 DYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRP 119
Query: 223 LGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGDE 282
G S+I D+ GP ++ DPAG +KA ++G S+LE+++K+ N E
Sbjct: 120 YGVSLIFAGIDQI-GPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKE--NLPEKE 176
Query: 283 TIQLAISCL 291
+ L I L
Sbjct: 177 AVTLGIKAL 185
Score = 101 bits (253), Expect = 1e-26
Identities = 29/83 (34%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 14 TIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNLYSLT 73
T+FSP+GRL+QVEYA +A+ +G T++ +K + ++ ++KKV L++ ++ + +
Sbjct: 1 TVFSPDGRLFQVEYAREAVKKGS-TALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLID 59
Query: 74 PTVGCVMTGMQADSRYQVQRARA 96
V V +G+ AD+R V AR
Sbjct: 60 DYVAAVTSGLVADARVLVDFARI 82
>d1rype_ d.153.1.4 (E:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 242
Score = 174 bits (441), Expect = 4e-54
Identities = 48/199 (24%), Positives = 102/199 (51%), Gaps = 9/199 (4%)
Query: 99 DRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNL 158
DR ++ FSPEGRL+QVEY+ +AI G T++ + + V+ EK+ L++ ++ +
Sbjct: 1 DRGVSTFSPEGRLFQVEYSLEAIKLGS-TAIGIATKEGVVLGVEKRATSPLLESDSIEKI 59
Query: 159 YSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQN- 217
+ +GC M+G+ AD+R ++ AR A + + + ++ L + D++ + +
Sbjct: 60 VEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGA 119
Query: 218 -----AEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKF 272
RP G ++++ +D ++G ++ +P+G + + A ++G + A + L ++
Sbjct: 120 SGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEW 179
Query: 273 KKKTNYTGDETIQLAISCL 291
+ T E L + L
Sbjct: 180 HS--SLTLKEAELLVLKIL 196
Score = 108 bits (271), Expect = 6e-29
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 10 DRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNL 69
DR ++ FSPEGRL+QVEY+ +AI G T++ + + V+ EK+ L++ ++ +
Sbjct: 1 DRGVSTFSPEGRLFQVEYSLEAIKLGS-TAIGIATKEGVVLGVEKRATSPLLESDSIEKI 59
Query: 70 YSLTPTVGCVMTGMQADSRYQVQRARA 96
+ +GC M+G+ AD+R ++ AR
Sbjct: 60 VEIDRHIGCAMSGLTADARSMIEHART 86
>d1rypc_ d.153.1.4 (C:) Proteasome alpha subunit (non-catalytic)
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 244
Score = 173 bits (439), Expect = 9e-54
Identities = 72/197 (36%), Positives = 114/197 (57%), Gaps = 4/197 (2%)
Query: 96 AGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTV 155
+D TIFSPEGRLYQVEYA ++I+ G T++ + D V+A E+KV +L++ T
Sbjct: 3 RRYDSRTTIFSPEGRLYQVEYALESISHAG-TAIGIMASDGIVLAAERKVTSTLLEQDTS 61
Query: 156 TN-LYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVY 214
T LY L + + G+ AD+ + AR A ++ + +P++ L R++DI Q Y
Sbjct: 62 TEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGY 121
Query: 215 TQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKK 274
TQ+ +RP G S I YD+ G +Y ++P+G Y +KA+SVG T+ A + L+ +K
Sbjct: 122 TQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKD 181
Query: 275 KTNYTGDETIQLAISCL 291
+ D+ I+LA+ L
Sbjct: 182 --DMKVDDAIELALKTL 196
Score = 105 bits (262), Expect = 1e-27
Identities = 55/242 (22%), Positives = 92/242 (38%), Gaps = 19/242 (7%)
Query: 6 SAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKT 65
S +D TIFSPEGRLYQVEYA ++I+ G T++ + D V+A E+KV +L++ T
Sbjct: 2 SRRYDSRTTIFSPEGRLYQVEYALESISHAG-TAIGIMASDGIVLAAERKVTSTLLEQDT 60
Query: 66 VTN-LYSLTPTVGCVMTGMQADSRYQVQRARAGFDRHITIFSPEGRLYQVEYAFKAINQG 124
T LY L + + G+ AD+ + AR ++ ++ + + + I QG
Sbjct: 61 STEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQG 120
Query: 125 --GVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQR 182
+ GV D + LY+ P+ V
Sbjct: 121 YTQHGGLRPFGVSFIYAG---------YDDRYGYQLYTSNPSGNYT-----GWKAISVGA 166
Query: 183 ARYEAASF-KYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEGPLIY 241
A + + + M +D T ++ + I N+G +
Sbjct: 167 NTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQ 226
Query: 242 KT 243
K
Sbjct: 227 KI 228
>d1j2pa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 243
Score = 170 bits (433), Expect = 7e-53
Identities = 59/195 (30%), Positives = 112/195 (57%), Gaps = 5/195 (2%)
Query: 97 GFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVT 156
G+DR IT+FSP+GRL+QVEYA +A+ +G T++ +K + ++ +K+V L++ T+
Sbjct: 4 GYDRAITVFSPDGRLFQVEYAREAVKRGA-TAIGIKCKEGVILIADKRVGSKLLEKDTIE 62
Query: 157 NLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQ 216
+Y + + +G+ AD+R + RAR EA + + + + +L +I D Q YTQ
Sbjct: 63 KIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDIPITVKELAKKICDFKQQYTQ 122
Query: 217 NAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKT 276
+RP G S+++ +E P +Y+TDP+G +KA ++G+ + EK+++
Sbjct: 123 YGGVRPFGVSLLIAGVNEV--PKLYETDPSGALLEYKATAIGMGRMAVTEFFEKEYRD-- 178
Query: 277 NYTGDETIQLAISCL 291
+ + D+ + L + +
Sbjct: 179 DLSFDDAMVLGLVAM 193
Score = 108 bits (271), Expect = 5e-29
Identities = 32/89 (35%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 8 GFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVT 67
G+DR IT+FSP+GRL+QVEYA +A+ +G T++ +K + ++ +K+V L++ T+
Sbjct: 4 GYDRAITVFSPDGRLFQVEYAREAVKRGA-TAIGIKCKEGVILIADKRVGSKLLEKDTIE 62
Query: 68 NLYSLTPTVGCVMTGMQADSRYQVQRARA 96
+Y + + +G+ AD+R + RAR
Sbjct: 63 KIYKIDEHICAATSGLVADARVLIDRARI 91
>d1irub_ d.153.1.4 (B:) Proteasome alpha subunit (non-catalytic)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 233
Score = 163 bits (414), Expect = 3e-50
Identities = 67/198 (33%), Positives = 105/198 (53%), Gaps = 4/198 (2%)
Query: 94 ARAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPK 153
A G+ +T FSP G+L Q+EYA A+ G SV +K + V+ATEKK L D +
Sbjct: 1 AERGYSFSLTTFSPSGKLVQIEYALAAVAGGA-PSVGIKAANGVVLATEKKQKSILYDER 59
Query: 154 TVTNLYSLTPTVGCVMTGMQADSRYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQV 213
+V + +T +G V +GM D R V RAR A + + +P QL R+A + Q
Sbjct: 60 SVHKVEPITKHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQE 119
Query: 214 YTQNAEMRPLGCSMILISYDENEGPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFK 273
YTQ+ +RP G +LI P ++++DP+G Y ++KA ++G ++LEK++
Sbjct: 120 YTQSGGVRPFGV-SLLICGWNEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYN 178
Query: 274 KKTNYTGDETIQLAISCL 291
+ ++ I AI L
Sbjct: 179 EDLEL--EDAIHTAILTL 194
Score = 105 bits (263), Expect = 6e-28
Identities = 36/92 (39%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 5 SSAGFDRHITIFSPEGRLYQVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPK 64
+ G+ +T FSP G+L Q+EYA A+ G SV +K + V+ATEKK L D +
Sbjct: 1 AERGYSFSLTTFSPSGKLVQIEYALAAVAGGA-PSVGIKAANGVVLATEKKQKSILYDER 59
Query: 65 TVTNLYSLTPTVGCVMTGMQADSRYQVQRARA 96
+V + +T +G V +GM D R V RAR
Sbjct: 60 SVHKVEPITKHIGLVYSGMGPDYRVLVHRARK 91
>d1q5qa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic)
{Rhodococcus erythropolis [TaxId: 1833]}
Length = 227
Score = 115 bits (289), Expect = 1e-31
Identities = 26/184 (14%), Positives = 57/184 (30%), Gaps = 16/184 (8%)
Query: 113 QVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNLYSLTPTVGCVMTGM 172
+ E A K I +G + V + D + E + + L +G G
Sbjct: 8 RSELARKGIARGR-SVVVLTFRDGVLFVAENP-------STALHKVSELYDRLGFAAVGK 59
Query: 173 QADSRYQVQRARYEAASFKYKHGYS-MPIDQLCNRIADISQVYTQNAEMRPLGCSMILIS 231
+ + A Y + + L N A + +P + +
Sbjct: 60 YNEFENLRRAGIVHADMRGYSYDRRDVTGRSLANAYAQT-LGTIFTEQPKPYEVEICVAE 118
Query: 232 YDE---NEGPLIYKTDPAGYYCSFKAVSVGVKTTEA-NSYLEKKFKKKTNYTGDETIQLA 287
+ P +Y+ G + V TTE + + + ++ + + + +A
Sbjct: 119 VGRVGSPKAPQLYRITYDGSIVDEQHFVVMGGTTEPIATAMRESYRA--DLDLEAAVGIA 176
Query: 288 ISCL 291
++ L
Sbjct: 177 VNAL 180
Score = 58.9 bits (142), Expect = 7e-11
Identities = 12/78 (15%), Positives = 22/78 (28%), Gaps = 8/78 (10%)
Query: 24 QVEYAFKAINQGGVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNLYSLTPTVGCVMTGM 83
+ E A K I +G + V + D + E + + L +G G
Sbjct: 8 RSELARKGIARGR-SVVVLTFRDGVLFVAENP-------STALHKVSELYDRLGFAAVGK 59
Query: 84 QADSRYQVQRARAGFDRH 101
+ + D
Sbjct: 60 YNEFENLRRAGIVHADMR 77
>d1ryp1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 222
Score = 101 bits (251), Expect = 3e-26
Identities = 33/183 (18%), Positives = 59/183 (32%), Gaps = 19/183 (10%)
Query: 125 GVTSVAVKGVDTAVVATEKKV-PDSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRA 183
G T + + G D AV+A + + D ++ + ++ + G AD V+R
Sbjct: 9 GGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKRF 68
Query: 184 RYEAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEGPLIYKT 243
+ + + H N A Q P I+ DE+ +Y
Sbjct: 69 KNSVKWYHFDHNDKKL---SINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKGAVYSF 125
Query: 244 DPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTG---------------DETIQLAI 288
DP G Y + + G + +L+ + K Y +E I+L
Sbjct: 126 DPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEVIKLVR 185
Query: 289 SCL 291
Sbjct: 186 DSF 188
Score = 49.0 bits (116), Expect = 1e-07
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 1/67 (1%)
Query: 36 GVTSVAVKGVDTAVVATEKKV-PDSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRA 94
G T + + G D AV+A + + D ++ + ++ + G AD V+R
Sbjct: 9 GGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAADGDALVKRF 68
Query: 95 RAGFDRH 101
+ +
Sbjct: 69 KNSVKWY 75
>d1ryp2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 233
Score = 97.9 bits (243), Expect = 5e-25
Identities = 25/176 (14%), Positives = 67/176 (38%), Gaps = 11/176 (6%)
Query: 125 GVTSVAVKGVDTAVVATEKKVP-DSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRA 183
G + +++K + ++A + SL+ V L + ++G +D ++ +
Sbjct: 8 GTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIERLL 67
Query: 184 RYEAASFKYKH-----GYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEGP 238
+ Y + ++ + +A + +Y + ++M PL ++I+ N
Sbjct: 68 KDLVTENAYDNPLADAEEALEPSYIFEYLATV--MYQRRSKMNPLWNAIIVAGVQSNGDQ 125
Query: 239 LIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNY---TGDETIQLAISCL 291
+ + G S ++ G AN L K ++++ T + ++ +
Sbjct: 126 FLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAIVNAM 181
Score = 47.8 bits (113), Expect = 3e-07
Identities = 9/62 (14%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Query: 36 GVTSVAVKGVDTAVVATEKKVP-DSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRA 94
G + +++K + ++A + SL+ V L + ++G +D ++ +
Sbjct: 8 GTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDMQHIERLL 67
Query: 95 RA 96
+
Sbjct: 68 KD 69
>d1iruh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 202
Score = 90.9 bits (225), Expect = 1e-22
Identities = 25/166 (15%), Positives = 57/166 (34%), Gaps = 8/166 (4%)
Query: 127 TSVAVKGVDTAVVATEKKVP-DSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARY 185
T +AV+ V+ + + S + + L + + C +G AD++ Y
Sbjct: 2 TIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTY 61
Query: 186 EAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEGPLIYKTDP 245
+ + + + ++ Y L +I+ +D EG +Y
Sbjct: 62 QLGFHSIELNEPPLVHTAASLFKEMCYRY-----REDLMAGIIIAGWDPQEGGQVYSVPM 116
Query: 246 AGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGDETIQLAISCL 291
G G ++ Y++ +++ T +E +Q + L
Sbjct: 117 GGMMVRQSFAIGGSGSSYIYGYVDATYRE--GMTKEECLQFTANAL 160
Score = 40.1 bits (93), Expect = 1e-04
Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 38 TSVAVKGVDTAVVATEKKVP-DSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARA 96
T +AV+ V+ + + S + + L + + C +G AD++
Sbjct: 2 TIMAVQFDGGVVLGADSRTTTGSYIANRVTDKLTPIHDRIFCCRSGSAADTQAVADAVTY 61
Query: 97 GFDRH 101
H
Sbjct: 62 QLGFH 66
>d1iru2_ d.153.1.4 (2:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 217
Score = 88.7 bits (219), Expect = 1e-21
Identities = 30/169 (17%), Positives = 65/169 (38%), Gaps = 5/169 (2%)
Query: 125 GVTSVAVKGVDTAVVATEKKVP-DSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRA 183
G + + VK V+A + SL + ++ + + + +G AD +Y Q
Sbjct: 8 GTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVL 67
Query: 184 RYEAASFKYK-HGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEGPLIYK 242
+ G+S + + + +Y++ ++M PL +M++ Y + E +
Sbjct: 68 GQMVIDEELLGDGHSYSPRAIHSWLTR--AMYSRRSKMNPLWNTMVIGGYADGE-SFLGY 124
Query: 243 TDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGDETIQLAISCL 291
D G +++ G A L + +K+ + E L C+
Sbjct: 125 VDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCM 173
Score = 44.7 bits (105), Expect = 3e-06
Identities = 12/71 (16%), Positives = 25/71 (35%), Gaps = 1/71 (1%)
Query: 36 GVTSVAVKGVDTAVVATEKKVP-DSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRA 94
G + + VK V+A + SL + ++ + + + +G AD +Y Q
Sbjct: 8 GTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADFQYLKQVL 67
Query: 95 RAGFDRHITIF 105
+
Sbjct: 68 GQMVIDEELLG 78
>d1iruj_ d.153.1.4 (J:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 204
Score = 86.0 bits (212), Expect = 7e-21
Identities = 22/169 (13%), Positives = 53/169 (31%), Gaps = 7/169 (4%)
Query: 125 GVTSVAVKGVDTAVVATEKKVP-DSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRA 183
G +A+KG + +A +++ + + ++ + + + G+ D + QR
Sbjct: 7 GGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRL 66
Query: 184 RYEAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEGP-LIYK 242
++ ++ K G + L + +A+ P ++ D I
Sbjct: 67 KFRLNLYELKEGRQIKPYTLMSMVAN----LLYEKRFGPYYTEPVIAGLDPKTFKPFICS 122
Query: 243 TDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGDETIQLAISCL 291
D G V E + + + N D + +
Sbjct: 123 LDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEP-NMDPDHLFETISQAM 170
Score = 47.1 bits (111), Expect = 4e-07
Identities = 9/67 (13%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Query: 36 GVTSVAVKGVDTAVVATEKKVP-DSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRA 94
G +A+KG + +A +++ + + ++ + + + G+ D + QR
Sbjct: 7 GGAVMAMKGKNCVAIAADRRFGIQAQLVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRL 66
Query: 95 RAGFDRH 101
+ + +
Sbjct: 67 KFRLNLY 73
>d1rypl_ d.153.1.4 (L:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 212
Score = 86.0 bits (212), Expect = 9e-21
Identities = 29/166 (17%), Positives = 61/166 (36%), Gaps = 7/166 (4%)
Query: 127 TSVAVKGVDTAVVATEKKV-PDSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARY 185
T++A + +VA + + + V +TV + + P + M G AD ++
Sbjct: 2 TTLAFRFQGGIIVAVDSRATAGNWVASQTVKRVIEINPFLLGTMAGGAADCQFWETWLGS 61
Query: 186 EAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEGPLIYKTDP 245
+ + + + + ++++ Y L ++ Y EGP IY D
Sbjct: 62 QCRLHELREKERISVAAASKILSNLVYQYK----GAGLSMGTMICGYTRKEGPTIYYVDS 117
Query: 246 AGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGDETIQLAISCL 291
G VG T A L+ +K + + ++ + L +
Sbjct: 118 DGTRLKGDIFCVGSGQTFAYGVLDSNYKW--DLSVEDALYLGKRSI 161
Score = 38.6 bits (89), Expect = 4e-04
Identities = 12/60 (20%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Query: 38 TSVAVKGVDTAVVATEKKV-PDSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARA 96
T++A + +VA + + + V +TV + + P + M G AD ++ +
Sbjct: 2 TTLAFRFQGGIIVAVDSRATAGNWVASQTVKRVIEINPFLLGTMAGGAADCQFWETWLGS 61
>d1irul_ d.153.1.4 (L:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 201
Score = 84.8 bits (209), Expect = 2e-20
Identities = 27/166 (16%), Positives = 64/166 (38%), Gaps = 8/166 (4%)
Query: 127 TSVAVKGVDTAVVATEKKVP-DSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARY 185
T++A K +VA + + + + +TV + + P + M G AD + +
Sbjct: 2 TTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLAR 61
Query: 186 EAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEGPLIYKTDP 245
+ ++ ++ + + +A+ + L ++ +D+ GP +Y D
Sbjct: 62 QCRIYELRNKERISVAAASKLLAN----MVYQYKGMGLSMGTMICGWDK-RGPGLYYVDS 116
Query: 246 AGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGDETIQLAISCL 291
G S SVG + A +++ + + ++ LA +
Sbjct: 117 EGNRISGATFSVGSGSVYAYGVMDRGYSY--DLEVEQAYDLARRAI 160
Score = 41.7 bits (97), Expect = 3e-05
Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Query: 38 TSVAVKGVDTAVVATEKKVP-DSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARA 96
T++A K +VA + + + + +TV + + P + M G AD + +
Sbjct: 2 TTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLLAR 61
Query: 97 GFDRH 101
+
Sbjct: 62 QCRIY 66
>d1q5qh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic)
{Rhodococcus erythropolis [TaxId: 1833]}
Length = 224
Score = 84.9 bits (209), Expect = 3e-20
Identities = 34/172 (19%), Positives = 65/172 (37%), Gaps = 9/172 (5%)
Query: 127 TSVAVKGVDTAVVATEKKV-PDSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARY 185
T VA+ ++A +++ +L+ + V +Y + G + V+
Sbjct: 2 TIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAV 61
Query: 186 EAASFKYKHGYSMPIDQLCNRIADISQVYTQNA----EMRPLGCSMILISYDENEGPLIY 241
E ++ G + D NR+A + + A + PL L + DE+ I
Sbjct: 62 ELEHYEKIEGVPLTFDGKANRLASMVRGNLGAAMQGLAVVPLLVGYDLDADDESRAGRIV 121
Query: 242 KTDPAGYYCSFKA--VSVGVKTTEANSYLEKKFKKKTNYTGDETIQLAISCL 291
D G +A +VG + A S L+K + + + ++ AI L
Sbjct: 122 SYDVVGGRYEERAGYHAVGSGSLFAKSALKKIYSP--DSDEETALRAAIESL 171
Score = 40.6 bits (94), Expect = 8e-05
Identities = 10/87 (11%), Positives = 28/87 (32%), Gaps = 1/87 (1%)
Query: 38 TSVAVKGVDTAVVATEKKV-PDSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARA 96
T VA+ ++A +++ +L+ + V +Y + G + V+
Sbjct: 2 TIVALTYKGGVLLAGDRRATQGNLIASRDVEKVYVTDEYSAAGIAGTAGIAIELVRLFAV 61
Query: 97 GFDRHITIFSPEGRLYQVEYAFKAINQ 123
+ + I ++ +
Sbjct: 62 ELEHYEKIEGVPLTFDGKANRLASMVR 88
>d1rypk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 198
Score = 84.1 bits (207), Expect = 3e-20
Identities = 25/167 (14%), Positives = 60/167 (35%), Gaps = 6/167 (3%)
Query: 127 TSVAVKGVDTAVVATEKKVPDS-LVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARY 185
+ ++ D+ ++A+ K V V + L+P G D+ + +
Sbjct: 3 IILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQA 62
Query: 186 EAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYD-ENEGPLIYKTD 244
+ + Y + + + + ++ RP ++++ YD + P +Y+ D
Sbjct: 63 NIQLYSIREDYELSPQAVSSFVRQELAKSIRS--RRPYQVNVLIGGYDKKKNKPELYQID 120
Query: 245 PAGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGDETIQLAISCL 291
G + G S L+ ++ + T +E + L C+
Sbjct: 121 YLGTKVELPYGAHGYSGFYTFSLLDHHYRP--DMTTEEGLDLLKLCV 165
Score = 43.6 bits (102), Expect = 8e-06
Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Query: 38 TSVAVKGVDTAVVATEKKVPDS-LVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARA 96
+ ++ D+ ++A+ K V V + L+P G D+ + +A
Sbjct: 3 IILGIRVQDSVILASSKAVTRGISVLKDSDDKTRQLSPHTLMSFAGEAGDTVQFAEYIQA 62
Query: 97 GFDRH 101
+
Sbjct: 63 NIQLY 67
>d1yarh1 d.153.1.4 (H:1-203) Proteasome beta subunit (catalytic)
{Archaeon Thermoplasma acidophilum [TaxId: 2303]}
Length = 203
Score = 84.1 bits (207), Expect = 3e-20
Identities = 32/166 (19%), Positives = 70/166 (42%), Gaps = 9/166 (5%)
Query: 127 TSVAVKGVDTAVVATEKKVP-DSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARY 185
T+V + D ++ATE++V ++ + K L+ + G + G+ D++ V+ +
Sbjct: 2 TTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKA 61
Query: 186 EAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEGPLIYKTDP 245
E ++ + +MPI+ + ++++ P +++ D P ++ D
Sbjct: 62 ELELYRLQRRVNMPIEAVATLLSNMLNQVK----YMPYMVQLLVGGID--TAPHVFSIDA 115
Query: 246 AGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGDETIQLAISCL 291
AG S G + LE ++ + T DE + L I +
Sbjct: 116 AGGSVEDIYASTGSGSPFVYGVLESQYSE--KMTVDEGVDLVIRAI 159
Score = 46.3 bits (109), Expect = 8e-07
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 38 TSVAVKGVDTAVVATEKKVP-DSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARA 96
T+V + D ++ATE++V ++ + K L+ + G + G+ D++ V+ +A
Sbjct: 2 TTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMKA 61
>d1rypi_ d.153.1.4 (I:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 222
Score = 84.1 bits (207), Expect = 6e-20
Identities = 29/166 (17%), Positives = 60/166 (36%), Gaps = 9/166 (5%)
Query: 127 TSVAVKGVDTAVVATEKKV-PDSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARY 185
T V VK + V+A + + +V K L+ ++P + C G AD+ Q
Sbjct: 2 TIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGS 61
Query: 186 EAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEGPLIYKTDP 245
+ + Y + + ++++ + G ++
Sbjct: 62 NIELHSLYTSREPRVVSALQMLKQHLFKYQGH------IGAYLIVAGVDPTGSHLFSIHA 115
Query: 246 AGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGDETIQLAISCL 291
G +S+G + A + LE +K+ + T +E I+LA +
Sbjct: 116 HGSTDVGYYLSLGSGSLAAMAVLESHWKQ--DLTKEEAIKLASDAI 159
Score = 40.9 bits (95), Expect = 6e-05
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 38 TSVAVKGVDTAVVATEKKV-PDSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARA 96
T V VK + V+A + + +V K L+ ++P + C G AD+ Q +
Sbjct: 2 TIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGS 61
Query: 97 GFDRH 101
+ H
Sbjct: 62 NIELH 66
>d1ryph_ d.153.1.4 (H:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 205
Score = 80.6 bits (198), Expect = 9e-19
Identities = 26/174 (14%), Positives = 57/174 (32%), Gaps = 10/174 (5%)
Query: 119 KAINQGGVTSVAVKGVDTAVVATEKKV-PDSLVDPKTVTNLYSLTPTVGCVMTGMQADSR 177
++ G + +AV D ++ + + + + + L + + C +G AD++
Sbjct: 4 GEVSLGA-SIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQ 62
Query: 178 YQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEG 237
+Y + ++G A L +I+ YD+
Sbjct: 63 AIADIVQYHLELYTSQYGTPS------TETAASVFKELCYENKDNLTAGIIVAGYDDKNK 116
Query: 238 PLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGDETIQLAISCL 291
+Y G G +T Y +K F++ + +ET+ L
Sbjct: 117 GEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSK--EETVDFIKHSL 168
Score = 42.0 bits (98), Expect = 3e-05
Identities = 9/73 (12%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 30 KAINQGGVTSVAVKGVDTAVVATEKKV-PDSLVDPKTVTNLYSLTPTVGCVMTGMQADSR 88
++ G + +AV D ++ + + + + + L + + C +G AD++
Sbjct: 4 GEVSLGA-SIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQ 62
Query: 89 YQVQRARAGFDRH 101
+ + +
Sbjct: 63 AIADIVQYHLELY 75
>d1rypj_ d.153.1.4 (J:) Proteasome beta subunit (catalytic) {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 204
Score = 80.2 bits (197), Expect = 9e-19
Identities = 25/169 (14%), Positives = 51/169 (30%), Gaps = 8/169 (4%)
Query: 125 GVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRAR 184
G VA+ G D +A + ++ + V +TG+ D + R
Sbjct: 8 GGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFLGITGLATDVTTLNEMFR 67
Query: 185 YEAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEG-PLIYKT 243
Y+ +K K ++ + ++ P ++ + G P I
Sbjct: 68 YKTNLYKLKEERAIEPETFTQLVSSSLYERR----FGPYFVGPVVAGINSKSGKPFIAGF 123
Query: 244 DPAGYYCSFKAVSVGVKTTE-ANSYLEKKFKKKTNYTGDETIQLAISCL 291
D G K V ++ E ++ N ++ + L
Sbjct: 124 DLIGCIDEAKDFIVSGTASDQLFGMCESLYEP--NLEPEDLFETISQAL 170
Score = 44.0 bits (103), Expect = 6e-06
Identities = 11/61 (18%), Positives = 20/61 (32%)
Query: 36 GVTSVAVKGVDTAVVATEKKVPDSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRAR 95
G VA+ G D +A + ++ + V +TG+ D + R
Sbjct: 8 GGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFLGITGLATDVTTLNEMFR 67
Query: 96 A 96
Sbjct: 68 Y 68
>d1irui_ d.153.1.4 (I:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 220
Score = 80.2 bits (197), Expect = 2e-18
Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 9/166 (5%)
Query: 127 TSVAVKGVDTAVVATEKKVPD-SLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARY 185
T V D V+ + + + +V K + ++ ++P + C G AD+ Q
Sbjct: 2 TIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISS 61
Query: 186 EAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEGPLIYKTDP 245
G + + + Y +G +++L D GP +Y P
Sbjct: 62 NLELHSLSTGRLPRVVTANRMLKQMLFRY-----RGYIGAALVLGGVDVT-GPHLYSIYP 115
Query: 246 AGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGDETIQLAISCL 291
G V++G + A + E KF+ + +E L +
Sbjct: 116 HGSTDKLPYVTMGSGSLAAMAVFEDKFRP--DMEEEEAKNLVSEAI 159
Score = 36.3 bits (83), Expect = 0.002
Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 38 TSVAVKGVDTAVVATEKKVPD-SLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARA 96
T V D V+ + + + +V K + ++ ++P + C G AD+ Q +
Sbjct: 2 TIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISS 61
Query: 97 GFDRHITIFSPEGRLYQVEYAFKAINQ 123
+ H GRL +V A + + Q
Sbjct: 62 NLELHSLST---GRLPRVVTANRMLKQ 85
>d1j2qh_ d.153.1.4 (H:) Proteasome beta subunit (catalytic)
{Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Length = 202
Score = 78.7 bits (193), Expect = 3e-18
Identities = 28/166 (16%), Positives = 61/166 (36%), Gaps = 7/166 (4%)
Query: 127 TSVAVKGVDTAVVATEKKVP-DSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARY 185
T+V + D V+ATEK+ + + K +Y + + G D+++ + +
Sbjct: 2 TTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKI 61
Query: 186 EAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEGPLIYKTDP 245
EA ++ + + + +++ Y P +++ D +
Sbjct: 62 EANLYEIRRERKPTVRAIATLTSNLLNSYRY----FPYLVQLLIGGIDSEGKSIYSIDPI 117
Query: 246 AGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGDETIQLAISCL 291
G V+ G + A LE +F DE ++LA+ +
Sbjct: 118 GGAIEEKDIVATGSGSLTAYGVLEDRFTP--EIGVDEAVELAVRAI 161
Score = 43.6 bits (102), Expect = 6e-06
Identities = 12/65 (18%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Query: 38 TSVAVKGVDTAVVATEKKVP-DSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARA 96
T+V + D V+ATEK+ + + K +Y + + G D+++ + +
Sbjct: 2 TTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARIIKI 61
Query: 97 GFDRH 101
+ +
Sbjct: 62 EANLY 66
>d1iru1_ d.153.1.4 (1:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 213
Score = 76.1 bits (186), Expect = 4e-17
Identities = 31/182 (17%), Positives = 58/182 (31%), Gaps = 12/182 (6%)
Query: 118 FKAINQGGVTSVAVKGVDTAVVATEKKV-PDSLVDPKTVTNLYSLTPTVGCVMTGMQADS 176
F G T +A+ G D A+VA++ ++ + + Y LT +G D
Sbjct: 2 FSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 61
Query: 177 RYQVQRARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENE 236
+ +K+ + +M + ++ I P I+ DE
Sbjct: 62 LTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRF----FPYYVYNIIGGLDEEG 117
Query: 237 GPLIYKTDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKT-------NYTGDETIQLAIS 289
+Y DP G Y + G + L+ + K + D ++L
Sbjct: 118 KGAVYSFDPVGSYQRDSFKAGGSASAMLQPLLDNQVGFKNMQNVEHVPLSLDRAMRLVKD 177
Query: 290 CL 291
Sbjct: 178 VF 179
Score = 44.9 bits (105), Expect = 3e-06
Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 1/74 (1%)
Query: 29 FKAINQGGVTSVAVKGVDTAVVATEKKV-PDSLVDPKTVTNLYSLTPTVGCVMTGMQADS 87
F G T +A+ G D A+VA++ ++ + + Y LT +G D
Sbjct: 2 FSPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRDSPKCYKLTDKTVIGCSGFHGDC 61
Query: 88 RYQVQRARAGFDRH 101
+ A +
Sbjct: 62 LTLTKIIEARLKMY 75
>d1iruk_ d.153.1.4 (K:) Proteasome beta subunit (catalytic) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 199
Score = 71.4 bits (174), Expect = 1e-15
Identities = 26/166 (15%), Positives = 62/166 (37%), Gaps = 5/166 (3%)
Query: 127 TSVAVKGVDTAVVATEKKVPD-SLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARY 185
+ ++G D +VA+++ + ++ ++ + + G D+ + +
Sbjct: 3 YLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQK 62
Query: 186 EAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEGPLIYKTDP 245
+K ++GY + N ++ P +++L YDE+EGP +Y D
Sbjct: 63 NVQLYKMRNGYELSPTAAANFTRRNLADCLRS--RTPYHVNLLLAGYDEHEGPALYYMDY 120
Query: 246 AGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGDETIQLAISCL 291
+ G S L++ + + + ++L CL
Sbjct: 121 LAALAKAPFAAHGYGAFLTLSILDRYYTP--TISRERAVELLRKCL 164
Score = 39.1 bits (90), Expect = 2e-04
Identities = 6/65 (9%), Positives = 24/65 (36%), Gaps = 1/65 (1%)
Query: 38 TSVAVKGVDTAVVATEKKVPD-SLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQRARA 96
+ ++G D +VA+++ + ++ ++ + + G D+ + +
Sbjct: 3 YLIGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQK 62
Query: 97 GFDRH 101
+
Sbjct: 63 NVQLY 67
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6, LASS6
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 52
Score = 26.2 bits (58), Expect = 0.81
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 261 TTEANSYLEKKFKKKTNY-TGDETIQLAISC 290
T + N+ LEK F T + L+
Sbjct: 1 TAQPNAILEKVFTAITKHPDEKRLEGLSKQL 31
>d2z3ba1 d.153.1.4 (A:1-180) HslV (ClpQ) protease {Bacillus subtilis
[TaxId: 1423]}
Length = 180
Score = 28.2 bits (62), Expect = 0.97
Identities = 14/169 (8%), Positives = 41/169 (24%), Gaps = 15/169 (8%)
Query: 125 GVTSVAVKGVDTAVVATEKKVP--DSLVDPKTVTNLYSLTPTVGCVMTGMQADSRYQVQR 182
T AV+ + ++ + +V ++V T + L + +
Sbjct: 5 ATTIFAVQHKGRSAMSGDGQVTFGQAVVMKHTARKVRKLFNGKVLAGFAGSVADAFTLFE 64
Query: 183 ARYEAASFKYKHGYSMPIDQLCNRIADISQVYTQNAEMRPLGCSMILISYDENEGPLIYK 242
+ ++ +D + ++ + L+
Sbjct: 65 KFEAKLEEYNGNLKRAAVELAKEWRSDKVLRKLEA-----------MLIVMNQDTLLLVS 113
Query: 243 TDPAGYYCSFKAVSVGVKTTEANSYLEKKFKKKTNYTGDETIQLAISCL 291
+++G A + K ++A + L
Sbjct: 114 GTGEVIEPDDGILAIGSGGNYALAAGRALKKH--AGESMSASEIARAAL 160
>d2cqxa1 a.4.1.1 (A:8-66) LAG1 longevity assurance homolog 5, LASS5
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 59
Score = 25.9 bits (57), Expect = 1.2
Identities = 10/33 (30%), Positives = 11/33 (33%), Gaps = 1/33 (3%)
Query: 259 VKTTEANSYLEKKFKKKTNY-TGDETIQLAISC 290
V E N LEK F T Y L+
Sbjct: 7 VNKVEPNDTLEKVFVSVTKYPDEKRLKGLSKQL 39
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.131 0.375
Gapped
Lambda K H
0.267 0.0493 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,013,549
Number of extensions: 44326
Number of successful extensions: 233
Number of sequences better than 10.0: 1
Number of HSP's gapped: 178
Number of HSP's successfully gapped: 74
Length of query: 291
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 206
Effective length of database: 1,240,546
Effective search space: 255552476
Effective search space used: 255552476
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.4 bits)