Query psy8789
Match_columns 851
No_of_seqs 685 out of 4973
Neff 7.8
Searched_HMMs 46136
Date Fri Aug 16 19:18:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy8789.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/8789hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1264|consensus 100.0 4E-166 8E-171 1364.5 48.5 752 26-848 59-838 (1267)
2 KOG0169|consensus 100.0 6.5E-97 1E-101 831.3 28.1 385 23-414 52-437 (746)
3 KOG1265|consensus 100.0 5.9E-87 1.3E-91 744.5 28.3 382 25-413 53-467 (1189)
4 PLN02952 phosphoinositide phos 100.0 9.1E-74 2E-78 651.1 22.1 251 160-414 13-271 (599)
5 PLN02228 Phosphoinositide phos 100.0 1.2E-72 2.6E-77 638.2 20.3 225 186-414 29-254 (567)
6 PLN02222 phosphoinositide phos 100.0 3.9E-72 8.4E-77 635.7 18.3 240 166-414 12-252 (581)
7 PLN02223 phosphoinositide phos 100.0 3.7E-71 8E-76 615.9 19.4 228 185-414 20-256 (537)
8 PLN02230 phosphoinositide phos 100.0 9.5E-71 2.1E-75 624.9 19.6 227 185-414 33-262 (598)
9 cd08594 PI-PLCc_eta Catalytic 100.0 7E-71 1.5E-75 552.5 13.8 147 265-411 1-148 (227)
10 cd08629 PI-PLCc_delta1 Catalyt 100.0 3E-70 6.5E-75 558.0 13.9 149 265-413 1-149 (258)
11 cd08632 PI-PLCc_eta1 Catalytic 100.0 4.2E-70 9E-75 553.2 13.7 150 265-414 1-151 (253)
12 cd08633 PI-PLCc_eta2 Catalytic 100.0 5.5E-70 1.2E-74 553.7 14.1 150 265-414 1-151 (254)
13 cd08627 PI-PLCc_gamma1 Catalyt 100.0 6.4E-70 1.4E-74 545.1 14.3 150 265-414 1-150 (229)
14 cd08595 PI-PLCc_zeta Catalytic 100.0 1.1E-69 2.4E-74 554.6 13.7 148 265-412 1-149 (257)
15 cd08631 PI-PLCc_delta4 Catalyt 100.0 1.3E-69 2.7E-74 554.5 14.0 148 265-412 1-149 (258)
16 cd08596 PI-PLCc_epsilon Cataly 100.0 1.4E-69 2.9E-74 553.1 13.9 150 265-414 1-154 (254)
17 cd08626 PI-PLCc_beta4 Catalyti 100.0 1.3E-69 2.9E-74 554.0 13.7 149 265-413 1-155 (257)
18 cd08624 PI-PLCc_beta2 Catalyti 100.0 2.3E-69 4.9E-74 553.5 14.1 150 265-414 1-157 (261)
19 cd08630 PI-PLCc_delta3 Catalyt 100.0 3.5E-69 7.6E-74 552.3 14.2 149 265-413 1-150 (258)
20 cd08591 PI-PLCc_beta Catalytic 100.0 4.5E-69 9.8E-74 550.1 14.2 150 265-414 1-156 (257)
21 cd08558 PI-PLCc_eukaryota Cata 100.0 4.8E-69 1E-73 541.9 14.0 147 265-411 1-147 (226)
22 cd08623 PI-PLCc_beta1 Catalyti 100.0 5.5E-69 1.2E-73 549.8 13.5 149 265-413 1-156 (258)
23 cd08593 PI-PLCc_delta Catalyti 100.0 6E-69 1.3E-73 552.3 13.9 149 265-413 1-149 (257)
24 cd08598 PI-PLC1c_yeast Catalyt 100.0 1.1E-68 2.4E-73 541.0 14.0 147 265-411 1-147 (231)
25 cd08628 PI-PLCc_gamma2 Catalyt 100.0 2.2E-68 4.8E-73 545.2 13.5 150 265-414 1-150 (254)
26 cd08625 PI-PLCc_beta3 Catalyti 100.0 9.7E-68 2.1E-72 544.7 13.6 149 265-413 1-156 (258)
27 cd08592 PI-PLCc_gamma Catalyti 100.0 3.2E-67 6.9E-72 528.8 13.7 148 265-412 1-148 (229)
28 cd08599 PI-PLCc_plant Catalyti 100.0 2.4E-66 5.3E-71 524.0 14.0 148 265-412 1-148 (228)
29 cd08597 PI-PLCc_PRIP_metazoa C 100.0 1.6E-65 3.5E-70 527.8 13.9 149 265-413 1-149 (260)
30 cd00137 PI-PLCc Catalytic doma 100.0 4.7E-41 1E-45 358.2 12.2 149 265-415 1-156 (274)
31 smart00148 PLCXc Phospholipase 100.0 2.2E-39 4.8E-44 308.6 12.4 135 266-400 1-135 (135)
32 PF00388 PI-PLC-X: Phosphatidy 100.0 1.7E-35 3.7E-40 287.8 12.2 144 268-411 1-146 (146)
33 KOG0790|consensus 100.0 7.9E-29 1.7E-33 261.8 16.4 225 500-780 3-253 (600)
34 KOG2996|consensus 100.0 6.2E-28 1.4E-32 261.2 14.2 199 631-841 642-863 (865)
35 KOG4637|consensus 99.9 1.7E-27 3.7E-32 246.3 11.8 251 495-754 17-431 (464)
36 KOG4792|consensus 99.9 4.1E-25 8.9E-30 214.9 9.7 169 656-843 7-183 (293)
37 KOG4792|consensus 99.9 9.6E-22 2.1E-26 191.5 16.4 102 496-607 6-113 (293)
38 KOG0790|consensus 99.8 1.6E-20 3.5E-25 199.2 10.1 163 428-604 43-217 (600)
39 KOG4278|consensus 99.8 3.4E-20 7.4E-25 204.2 12.4 181 428-636 97-280 (1157)
40 KOG1264|consensus 99.8 5.1E-20 1.1E-24 206.4 13.1 170 415-604 562-740 (1267)
41 cd08589 PI-PLCc_SaPLC1_like Ca 99.8 1.2E-19 2.5E-24 193.5 10.0 145 266-411 3-209 (324)
42 KOG0197|consensus 99.8 5.5E-19 1.2E-23 195.5 11.8 196 421-639 14-222 (468)
43 KOG3601|consensus 99.8 4.9E-20 1.1E-24 179.5 2.8 176 641-840 40-218 (222)
44 cd00173 SH2 Src homology 2 dom 99.8 3.4E-18 7.5E-23 153.3 12.1 94 502-602 1-94 (94)
45 smart00252 SH2 Src homology 2 99.7 9.2E-18 2E-22 147.3 11.2 83 501-589 1-83 (84)
46 cd00173 SH2 Src homology 2 dom 99.7 1.9E-17 4.1E-22 148.5 11.9 90 661-751 1-94 (94)
47 KOG4226|consensus 99.7 4E-17 8.7E-22 163.3 11.9 167 420-603 193-378 (379)
48 PF00017 SH2: SH2 domain; Int 99.7 2.8E-17 6E-22 141.7 9.5 77 503-584 1-77 (77)
49 KOG4226|consensus 99.7 5.2E-17 1.1E-21 162.5 12.5 96 657-752 278-378 (379)
50 smart00252 SH2 Src homology 2 99.7 4.8E-17 1E-21 142.7 10.9 81 660-741 1-83 (84)
51 cd08590 PI-PLCc_Rv2075c_like C 99.7 3.9E-17 8.4E-22 173.1 10.2 146 265-411 3-170 (267)
52 PF00017 SH2: SH2 domain; Int 99.7 1.6E-16 3.4E-21 137.0 8.5 75 662-736 1-77 (77)
53 KOG4278|consensus 99.7 1.7E-16 3.6E-21 175.5 10.1 121 632-754 122-247 (1157)
54 KOG2996|consensus 99.5 5.2E-15 1.1E-19 161.7 7.4 135 463-606 644-785 (865)
55 cd01248 PH_PLC Phospholipase C 99.5 6.5E-15 1.4E-19 137.0 6.5 83 15-97 30-115 (115)
56 KOG4637|consensus 99.5 2.1E-14 4.6E-19 149.7 8.2 103 656-759 19-127 (464)
57 cd08557 PI-PLCc_bacteria_like 99.5 2.5E-14 5.4E-19 154.1 8.6 146 266-413 3-160 (271)
58 KOG0027|consensus 99.5 5.8E-13 1.3E-17 130.4 13.3 132 114-252 10-150 (151)
59 COG5126 FRQ1 Ca2+-binding prot 99.4 1.4E-12 3E-17 125.7 13.8 137 107-252 16-157 (160)
60 KOG0197|consensus 99.4 2.2E-13 4.8E-18 151.3 7.7 119 635-753 47-185 (468)
61 PF14604 SH3_9: Variant SH3 do 99.3 1E-12 2.3E-17 102.2 4.1 49 789-838 1-49 (49)
62 PF09279 EF-hand_like: Phospho 99.2 8.6E-12 1.9E-16 109.0 4.8 79 186-265 5-83 (83)
63 KOG0028|consensus 99.2 2E-10 4.3E-15 108.1 12.5 134 111-251 32-170 (172)
64 cd08555 PI-PLCc_GDPD_SF Cataly 99.2 5E-11 1.1E-15 120.1 9.2 97 279-379 2-108 (179)
65 PTZ00183 centrin; Provisional 99.2 3.8E-10 8.2E-15 110.9 13.9 133 112-251 17-154 (158)
66 PTZ00184 calmodulin; Provision 99.1 5E-10 1.1E-14 108.7 13.4 132 114-252 13-149 (149)
67 KOG2070|consensus 99.1 4E-11 8.8E-16 129.6 5.4 61 783-844 16-76 (661)
68 PF07653 SH3_2: Variant SH3 do 99.1 5.2E-11 1.1E-15 95.3 4.5 54 786-840 1-55 (55)
69 KOG0194|consensus 99.1 2E-10 4.3E-15 129.8 10.2 119 500-638 48-172 (474)
70 KOG3601|consensus 99.0 5.1E-11 1.1E-15 117.0 1.6 127 433-590 14-140 (222)
71 KOG2199|consensus 99.0 7.7E-11 1.7E-15 125.0 0.7 58 783-841 214-271 (462)
72 KOG0030|consensus 99.0 3.4E-09 7.5E-14 97.4 10.7 131 113-251 12-151 (152)
73 KOG1029|consensus 99.0 4.4E-10 9.6E-15 127.0 5.3 59 784-843 1053-1111(1118)
74 KOG1118|consensus 98.9 4.9E-10 1.1E-14 115.2 4.3 60 783-843 305-364 (366)
75 KOG0194|consensus 98.9 2.4E-09 5.3E-14 121.1 9.9 101 658-761 47-157 (474)
76 PF00018 SH3_1: SH3 domain; I 98.9 1.2E-09 2.6E-14 84.8 4.9 47 788-834 1-48 (48)
77 KOG0031|consensus 98.9 1.5E-08 3.3E-13 94.8 12.5 126 114-250 34-164 (171)
78 KOG0162|consensus 98.9 1.1E-09 2.5E-14 123.2 6.0 55 785-840 1052-1106(1106)
79 KOG1930|consensus 98.8 3.2E-09 6.9E-14 113.5 6.2 95 658-753 210-323 (483)
80 cd00174 SH3 Src homology 3 dom 98.8 8.6E-09 1.9E-13 81.6 6.9 53 787-839 2-54 (54)
81 smart00326 SH3 Src homology 3 98.8 8.2E-09 1.8E-13 82.9 6.7 56 785-840 3-58 (58)
82 PF14788 EF-hand_10: EF hand; 98.8 1E-08 2.3E-13 78.4 5.6 51 127-177 1-51 (51)
83 KOG0036|consensus 98.7 9.2E-08 2E-12 102.9 13.0 133 108-250 10-145 (463)
84 KOG4348|consensus 98.7 3.1E-09 6.7E-14 113.5 1.5 62 783-845 99-160 (627)
85 cd08586 PI-PLCc_BcPLC_like Cat 98.7 3.2E-08 7E-13 106.2 7.4 142 269-414 7-152 (279)
86 KOG0037|consensus 98.7 2.8E-07 6.1E-12 91.9 12.6 127 113-250 58-187 (221)
87 KOG4348|consensus 98.6 3.1E-08 6.8E-13 105.9 4.9 60 783-843 260-321 (627)
88 cd05022 S-100A13 S-100A13: S-1 98.6 1.1E-07 2.3E-12 83.8 6.9 65 114-178 10-78 (89)
89 KOG4225|consensus 98.6 4.9E-08 1.1E-12 105.3 5.2 56 786-842 232-287 (489)
90 PF13499 EF-hand_7: EF-hand do 98.6 1.9E-07 4.1E-12 77.6 7.1 60 114-173 2-66 (66)
91 KOG2856|consensus 98.5 2.3E-08 5E-13 105.1 1.8 55 785-840 415-471 (472)
92 KOG1930|consensus 98.5 1E-07 2.2E-12 102.2 6.3 97 499-605 210-324 (483)
93 KOG0044|consensus 98.5 1.4E-06 3.1E-11 87.3 12.4 137 112-253 26-177 (193)
94 cd08588 PI-PLCc_At5g67130_like 98.5 3.2E-07 6.8E-12 98.0 8.1 134 266-402 6-145 (270)
95 cd05027 S-100B S-100B: S-100B 98.4 7.9E-07 1.7E-11 78.4 8.0 65 114-178 10-82 (88)
96 PF14633 SH2_2: SH2 domain; PD 98.4 7.4E-06 1.6E-10 83.9 15.8 170 500-739 37-219 (220)
97 KOG4225|consensus 98.4 2E-07 4.4E-12 100.6 4.2 54 785-839 433-488 (489)
98 KOG1029|consensus 98.4 1.6E-07 3.5E-12 106.8 3.5 60 784-844 693-754 (1118)
99 KOG3751|consensus 98.4 1.5E-07 3.2E-12 103.7 2.7 105 494-604 512-619 (622)
100 cd05026 S-100Z S-100Z: S-100Z 98.3 2.6E-06 5.6E-11 76.0 7.9 64 114-177 12-83 (93)
101 cd05025 S-100A1 S-100A1: S-100 98.3 2.6E-06 5.7E-11 75.9 7.9 65 114-178 11-83 (92)
102 KOG2546|consensus 98.2 4.1E-07 9E-12 97.9 2.4 57 785-842 424-480 (483)
103 cd00052 EH Eps15 homology doma 98.2 4.3E-06 9.4E-11 69.4 7.0 60 115-176 2-62 (67)
104 cd05029 S-100A6 S-100A6: S-100 98.2 5.9E-06 1.3E-10 72.8 8.0 65 114-178 12-82 (88)
105 smart00027 EH Eps15 homology d 98.2 6.3E-06 1.4E-10 74.1 7.9 63 113-177 11-74 (96)
106 cd05031 S-100A10_like S-100A10 98.2 5.6E-06 1.2E-10 74.1 7.5 63 114-176 10-80 (94)
107 PF13833 EF-hand_8: EF-hand do 98.1 7E-06 1.5E-10 65.2 6.5 50 126-175 3-53 (54)
108 COG5126 FRQ1 Ca2+-binding prot 98.1 6.3E-06 1.4E-10 80.0 7.3 61 114-174 94-155 (160)
109 KOG0034|consensus 98.1 2.3E-05 5E-10 78.6 11.6 131 113-252 34-176 (187)
110 KOG3751|consensus 98.1 1.3E-06 2.9E-11 96.3 2.3 98 655-752 514-618 (622)
111 KOG3655|consensus 98.1 9.4E-07 2E-11 97.0 1.0 58 783-840 426-483 (484)
112 KOG0027|consensus 98.0 9.9E-06 2.2E-10 79.3 7.0 63 113-175 86-149 (151)
113 cd00051 EFh EF-hand, calcium b 98.0 1.2E-05 2.7E-10 64.6 6.4 60 114-173 2-62 (63)
114 cd05023 S-100A11 S-100A11: S-1 98.0 1.8E-05 3.8E-10 70.0 7.8 67 111-178 9-83 (89)
115 KOG3875|consensus 98.0 1.2E-06 2.5E-11 90.9 -0.2 60 785-844 269-334 (362)
116 cd00213 S-100 S-100: S-100 dom 98.0 1.5E-05 3.3E-10 70.3 6.5 65 114-178 10-82 (88)
117 PF14658 EF-hand_9: EF-hand do 97.9 2.6E-05 5.6E-10 63.7 6.5 59 117-175 3-64 (66)
118 KOG1702|consensus 97.9 6.7E-06 1.4E-10 80.2 3.3 56 784-840 207-264 (264)
119 KOG0515|consensus 97.9 4.7E-06 1E-10 91.9 2.1 54 786-840 685-741 (752)
120 KOG3697|consensus 97.9 1.5E-05 3.3E-10 81.8 5.5 100 496-605 196-344 (345)
121 PLN02964 phosphatidylserine de 97.9 4.9E-05 1.1E-09 89.5 9.8 93 114-210 145-245 (644)
122 KOG0028|consensus 97.8 4.1E-05 9E-10 72.7 6.8 61 114-174 108-169 (172)
123 KOG3697|consensus 97.8 1.8E-05 3.8E-10 81.4 4.6 94 658-754 199-344 (345)
124 KOG1843|consensus 97.8 1.1E-05 2.4E-10 86.8 2.4 55 784-839 416-472 (473)
125 KOG4223|consensus 97.7 7.5E-05 1.6E-09 79.0 7.2 134 114-253 79-230 (325)
126 cd05030 calgranulins Calgranul 97.6 0.00012 2.6E-09 64.7 6.5 63 115-177 11-81 (88)
127 KOG0041|consensus 97.6 0.00012 2.6E-09 71.9 6.7 65 113-177 100-165 (244)
128 KOG4223|consensus 97.6 0.00019 4.1E-09 76.0 8.6 128 113-247 164-301 (325)
129 KOG0037|consensus 97.6 0.00019 4E-09 72.1 7.8 60 115-174 127-187 (221)
130 KOG3523|consensus 97.6 1E-05 2.2E-10 91.0 -1.4 61 784-844 608-669 (695)
131 PF13499 EF-hand_7: EF-hand do 97.6 0.00011 2.5E-09 60.8 5.2 66 148-249 1-66 (66)
132 PTZ00183 centrin; Provisional 97.5 0.00024 5.2E-09 69.5 7.5 97 112-208 53-154 (158)
133 PTZ00184 calmodulin; Provision 97.5 0.00029 6.2E-09 68.0 7.7 95 113-207 48-147 (149)
134 cd00252 SPARC_EC SPARC_EC; ext 97.5 0.00031 6.7E-09 65.1 7.0 56 114-173 50-106 (116)
135 cd05024 S-100A10 S-100A10: A s 97.5 0.00046 1E-08 60.5 7.7 64 115-178 11-79 (91)
136 KOG2222|consensus 97.4 2.1E-05 4.6E-10 85.6 -1.3 59 784-843 548-606 (848)
137 PF12814 Mcp5_PH: Meiotic cell 97.4 0.00048 1E-08 64.8 7.3 63 27-99 60-122 (123)
138 KOG1856|consensus 97.3 0.0018 4E-08 78.2 13.1 174 499-741 1106-1289(1299)
139 PF00036 EF-hand_1: EF hand; 97.3 0.0002 4.3E-09 49.0 3.1 29 148-176 1-29 (29)
140 KOG0044|consensus 97.3 0.00053 1.2E-08 69.0 7.3 98 111-208 63-175 (193)
141 KOG4429|consensus 97.2 0.00029 6.3E-09 72.6 3.8 55 785-840 364-418 (421)
142 KOG4773|consensus 97.2 5.3E-05 1.2E-09 80.1 -1.6 60 785-845 176-235 (386)
143 PF13833 EF-hand_8: EF-hand do 97.1 0.0012 2.5E-08 52.4 5.4 52 194-251 2-53 (54)
144 KOG0038|consensus 97.0 0.0045 9.8E-08 57.9 9.4 115 126-250 54-176 (189)
145 KOG1451|consensus 96.9 0.00095 2.1E-08 75.0 5.2 55 785-840 757-812 (812)
146 cd08622 PI-PLCXDc_CG14945_like 96.9 0.0051 1.1E-07 66.3 9.8 128 269-402 6-150 (276)
147 PF14633 SH2_2: SH2 domain; PD 96.8 0.0067 1.5E-07 62.5 9.9 76 661-738 39-123 (220)
148 KOG2643|consensus 96.8 0.0023 5.1E-08 70.2 6.9 112 126-250 214-345 (489)
149 KOG4251|consensus 96.8 0.0014 3E-08 66.2 4.6 135 110-250 99-263 (362)
150 cd05022 S-100A13 S-100A13: S-1 96.8 0.0019 4.2E-08 56.9 4.8 54 192-251 21-75 (89)
151 cd08587 PI-PLCXDc_like Catalyt 96.7 0.0086 1.9E-07 65.2 10.1 130 269-403 6-163 (288)
152 PLN02964 phosphatidylserine de 96.7 0.0047 1E-07 73.2 8.4 65 112-176 179-244 (644)
153 KOG0034|consensus 96.6 0.0086 1.9E-07 60.3 9.0 96 113-208 67-175 (187)
154 cd08556 GDPD Glycerophosphodie 96.6 0.0064 1.4E-07 61.3 8.2 62 290-364 10-71 (189)
155 KOG4575|consensus 96.6 0.0022 4.7E-08 72.7 5.0 59 784-843 8-68 (874)
156 KOG3632|consensus 96.6 0.0018 3.9E-08 76.8 4.3 59 785-844 1139-1206(1335)
157 KOG0609|consensus 96.6 0.0034 7.4E-08 70.9 6.0 56 784-839 214-280 (542)
158 cd08562 GDPD_EcUgpQ_like Glyce 96.6 0.0052 1.1E-07 64.3 7.2 40 291-330 11-50 (229)
159 cd08582 GDPD_like_2 Glyceropho 96.5 0.0071 1.5E-07 63.6 8.0 40 291-330 11-50 (233)
160 cd05029 S-100A6 S-100A6: S-100 96.5 0.0052 1.1E-07 54.2 5.7 53 194-251 26-79 (88)
161 PF03009 GDPD: Glycerophosphor 96.3 0.0042 9.1E-08 65.6 5.0 40 291-330 8-47 (256)
162 PF12763 EF-hand_4: Cytoskelet 96.3 0.014 3E-07 53.1 7.5 63 112-176 10-72 (104)
163 cd08579 GDPD_memb_like Glycero 96.3 0.0076 1.7E-07 62.8 6.8 40 291-330 11-50 (220)
164 KOG3508|consensus 96.3 0.00024 5.3E-09 84.9 -5.3 235 501-754 81-326 (932)
165 KOG0036|consensus 96.3 0.0068 1.5E-07 66.2 6.1 92 111-207 50-145 (463)
166 KOG2528|consensus 96.3 0.0013 2.8E-08 72.2 0.5 57 786-842 4-61 (490)
167 PF00036 EF-hand_1: EF hand; 96.1 0.0085 1.8E-07 41.0 3.8 27 114-140 2-29 (29)
168 KOG0031|consensus 96.1 0.017 3.7E-07 54.9 7.0 64 111-174 100-164 (171)
169 PF13202 EF-hand_5: EF hand; P 96.0 0.0058 1.3E-07 40.3 2.6 23 150-172 2-24 (25)
170 cd08565 GDPD_pAtGDE_like Glyce 96.0 0.027 5.8E-07 59.4 8.7 40 291-330 11-50 (235)
171 KOG0030|consensus 95.9 0.045 9.8E-07 51.3 8.8 81 86-172 67-148 (152)
172 KOG4566|consensus 95.9 0.014 3.1E-07 61.2 6.3 160 497-713 48-214 (258)
173 cd05023 S-100A11 S-100A11: S-1 95.9 0.018 3.9E-07 50.9 6.0 51 195-250 26-79 (89)
174 KOG0040|consensus 95.9 0.082 1.8E-06 65.7 13.1 162 81-250 2212-2397(2399)
175 cd00051 EFh EF-hand, calcium b 95.9 0.029 6.4E-07 44.4 6.7 27 149-175 2-28 (63)
176 cd05026 S-100Z S-100Z: S-100Z 95.9 0.018 4E-07 51.3 5.9 54 193-251 24-81 (93)
177 PRK12309 transaldolase/EF-hand 95.9 0.022 4.8E-07 64.1 7.9 53 110-175 332-385 (391)
178 cd00252 SPARC_EC SPARC_EC; ext 95.8 0.023 5.1E-07 52.7 6.7 92 107-207 11-107 (116)
179 KOG2643|consensus 95.8 0.019 4.1E-07 63.3 6.7 131 113-251 319-453 (489)
180 KOG0377|consensus 95.8 0.023 4.9E-07 62.4 7.3 62 114-175 549-615 (631)
181 cd08566 GDPD_AtGDE_like Glycer 95.8 0.027 5.8E-07 59.6 7.7 39 292-330 14-52 (240)
182 KOG3557|consensus 95.7 0.0036 7.8E-08 71.6 0.8 61 784-845 500-560 (721)
183 cd08616 PI-PLCXD1c Catalytic d 95.7 0.063 1.4E-06 58.4 10.4 128 269-403 7-165 (290)
184 KOG3771|consensus 95.7 0.0051 1.1E-07 68.5 2.0 56 783-839 399-455 (460)
185 cd08568 GDPD_TmGDE_like Glycer 95.6 0.039 8.4E-07 57.8 8.3 41 290-330 11-51 (226)
186 PF13405 EF-hand_6: EF-hand do 95.6 0.019 4.2E-07 39.8 3.8 28 114-141 2-31 (31)
187 cd05027 S-100B S-100B: S-100B 95.5 0.029 6.4E-07 49.4 5.8 48 197-251 27-79 (88)
188 cd08584 PI-PLCc_GDPD_SF_unchar 95.5 0.043 9.4E-07 55.3 7.6 70 295-377 8-77 (192)
189 cd08563 GDPD_TtGDE_like Glycer 95.4 0.016 3.4E-07 60.9 4.2 41 291-331 13-53 (230)
190 cd08577 PI-PLCc_GDPD_SF_unchar 95.2 0.049 1.1E-06 57.0 7.2 97 279-385 4-109 (228)
191 KOG4566|consensus 95.2 0.032 7E-07 58.6 5.8 87 656-743 48-142 (258)
192 cd08564 GDPD_GsGDE_like Glycer 95.2 0.073 1.6E-06 57.2 8.6 39 291-329 18-56 (265)
193 cd08575 GDPD_GDE4_like Glycero 95.0 0.022 4.9E-07 61.1 4.3 40 292-331 14-53 (264)
194 cd00052 EH Eps15 homology doma 95.0 0.062 1.4E-06 44.1 6.0 52 190-250 9-60 (67)
195 KOG3775|consensus 94.8 0.014 3.1E-07 62.6 2.0 63 783-845 261-324 (482)
196 cd08561 GDPD_cytoplasmic_ScUgp 94.8 0.027 5.8E-07 59.9 4.1 41 291-331 11-51 (249)
197 cd05030 calgranulins Calgranul 94.8 0.041 8.8E-07 48.5 4.5 52 194-251 24-79 (88)
198 smart00027 EH Eps15 homology d 94.8 0.052 1.1E-06 48.6 5.3 63 147-209 10-73 (96)
199 PF13405 EF-hand_6: EF-hand do 94.8 0.031 6.7E-07 38.8 3.0 27 148-174 1-27 (31)
200 cd08574 GDPD_GDE_2_3_6 Glycero 94.7 0.03 6.5E-07 59.7 4.1 41 291-331 14-54 (252)
201 cd05025 S-100A1 S-100A1: S-100 94.7 0.054 1.2E-06 48.1 5.1 50 197-251 28-80 (92)
202 cd01244 PH_RasGAP_CG9209 RAS_G 94.7 0.1 2.2E-06 47.0 6.8 57 25-96 41-97 (98)
203 KOG3725|consensus 94.7 0.01 2.3E-07 60.4 0.5 56 784-840 317-374 (375)
204 PF13202 EF-hand_5: EF hand; P 94.7 0.049 1.1E-06 35.9 3.5 24 114-137 1-25 (25)
205 cd05024 S-100A10 S-100A10: A s 94.6 0.078 1.7E-06 46.7 5.8 60 186-250 13-75 (91)
206 KOG2562|consensus 94.5 0.2 4.3E-06 56.0 9.9 89 118-209 284-380 (493)
207 KOG0046|consensus 94.5 0.083 1.8E-06 59.5 7.0 184 113-327 20-225 (627)
208 cd08567 GDPD_SpGDE_like Glycer 94.4 0.04 8.6E-07 59.0 4.4 40 292-331 14-53 (263)
209 cd08612 GDPD_GDE4 Glycerophosp 94.4 0.041 8.9E-07 60.2 4.4 41 291-331 39-79 (300)
210 cd08581 GDPD_like_1 Glyceropho 94.3 0.043 9.4E-07 57.6 4.1 41 291-331 11-51 (229)
211 cd08607 GDPD_GDE5 Glycerophosp 94.2 0.048 1E-06 59.4 4.5 49 284-332 12-60 (290)
212 cd01238 PH_Tec Tec pleckstrin 94.2 0.15 3.3E-06 46.5 7.1 62 25-96 44-105 (106)
213 cd08580 GDPD_Rv2277c_like Glyc 94.2 0.055 1.2E-06 57.9 4.7 42 290-331 12-53 (263)
214 cd08601 GDPD_SaGlpQ_like Glyce 94.2 0.048 1E-06 58.2 4.3 40 291-330 13-52 (256)
215 cd05031 S-100A10_like S-100A10 94.2 0.094 2E-06 46.7 5.5 52 195-251 25-79 (94)
216 PRK11143 glpQ glycerophosphodi 94.1 0.057 1.2E-06 60.4 4.8 42 290-331 38-79 (355)
217 cd08605 GDPD_GDE5_like_1_plant 94.1 0.048 1E-06 59.1 4.1 38 293-330 25-62 (282)
218 cd01236 PH_outspread Outspread 93.9 0.15 3.3E-06 46.3 6.2 58 23-96 45-102 (104)
219 cd08609 GDPD_GDE3 Glycerophosp 93.8 0.059 1.3E-06 59.2 4.2 49 280-331 31-79 (315)
220 cd08573 GDPD_GDE1 Glycerophosp 93.8 0.061 1.3E-06 57.5 4.3 40 291-330 11-50 (258)
221 cd08600 GDPD_EcGlpQ_like Glyce 93.8 0.061 1.3E-06 59.3 4.4 42 290-331 12-53 (318)
222 PRK09454 ugpQ cytoplasmic glyc 93.6 0.06 1.3E-06 57.2 3.7 41 291-331 20-60 (249)
223 cd08559 GDPD_periplasmic_GlpQ_ 93.6 0.063 1.4E-06 58.7 3.9 41 291-331 13-53 (296)
224 cd08606 GDPD_YPL110cp_fungi Gl 93.4 0.068 1.5E-06 58.1 3.8 39 293-331 24-62 (286)
225 cd08571 GDPD_SHV3_plant Glycer 93.3 0.077 1.7E-06 58.1 4.0 41 291-331 13-53 (302)
226 PF14788 EF-hand_10: EF hand; 93.3 0.19 4.2E-06 39.0 4.9 46 197-249 2-47 (51)
227 cd08570 GDPD_YPL206cp_fungi Gl 93.3 0.099 2.1E-06 55.0 4.7 41 291-331 11-51 (234)
228 PF00169 PH: PH domain; Inter 93.2 0.46 9.9E-06 42.0 8.3 64 24-98 40-103 (104)
229 cd00213 S-100 S-100: S-100 dom 93.2 0.2 4.3E-06 43.9 5.7 31 216-251 49-79 (88)
230 cd08620 PI-PLCXDc_like_1 Catal 93.0 0.53 1.2E-05 50.7 9.7 135 269-403 6-152 (281)
231 KOG3632|consensus 93.0 0.051 1.1E-06 65.0 2.0 58 784-842 1244-1309(1335)
232 cd01264 PH_melted Melted pleck 92.9 0.28 6.2E-06 44.3 6.3 57 27-96 43-99 (101)
233 KOG0377|consensus 92.7 0.65 1.4E-05 51.4 9.8 129 113-248 465-612 (631)
234 PF14658 EF-hand_9: EF-hand do 92.6 0.36 7.8E-06 39.8 5.9 57 189-250 7-63 (66)
235 cd08602 GDPD_ScGlpQ1_like Glyc 92.6 0.11 2.4E-06 57.0 4.0 42 290-331 12-53 (309)
236 cd08583 PI-PLCc_GDPD_SF_unchar 92.6 0.13 2.7E-06 54.3 4.3 39 292-330 14-52 (237)
237 KOG2999|consensus 92.6 0.025 5.4E-07 64.0 -1.1 71 29-100 590-661 (713)
238 cd08604 GDPD_SHV3_repeat_2 Gly 92.5 0.13 2.7E-06 56.4 4.3 42 290-331 12-53 (300)
239 cd08610 GDPD_GDE6 Glycerophosp 92.5 0.13 2.8E-06 56.5 4.3 42 290-331 34-75 (316)
240 smart00233 PH Pleckstrin homol 92.4 0.55 1.2E-05 40.8 7.6 59 26-98 43-101 (102)
241 cd08572 GDPD_GDE5_like Glycero 92.3 0.14 3.1E-06 55.8 4.3 43 290-332 19-61 (293)
242 KOG0038|consensus 92.1 0.29 6.3E-06 46.2 5.4 59 117-175 113-177 (189)
243 smart00054 EFh EF-hand, calciu 92.1 0.16 3.4E-06 33.1 2.9 27 149-175 2-28 (29)
244 cd08619 PI-PLCXDc_plant Cataly 91.9 0.39 8.5E-06 51.4 6.8 128 266-402 23-156 (285)
245 PF10591 SPARC_Ca_bdg: Secrete 91.9 0.2 4.3E-06 46.4 4.1 53 117-171 59-112 (113)
246 cd08578 GDPD_NUC-2_fungi Putat 91.0 0.25 5.4E-06 53.8 4.5 52 275-332 3-54 (300)
247 cd01266 PH_Gab Gab (Grb2-assoc 91.0 0.67 1.4E-05 42.4 6.6 62 24-97 46-107 (108)
248 cd01235 PH_SETbf Set binding f 90.8 0.73 1.6E-05 41.3 6.7 63 25-97 38-100 (101)
249 cd08585 GDPD_like_3 Glyceropho 90.5 0.23 5E-06 52.4 3.5 39 292-331 20-58 (237)
250 cd08608 GDPD_GDE2 Glycerophosp 90.4 0.28 6E-06 54.7 4.2 41 291-331 14-54 (351)
251 cd08613 GDPD_GDE4_like_1 Glyce 90.3 0.26 5.7E-06 53.6 3.8 39 293-331 60-98 (309)
252 cd00821 PH Pleckstrin homology 89.9 1.2 2.6E-05 38.1 7.1 54 27-96 42-95 (96)
253 KOG0751|consensus 89.6 0.66 1.4E-05 52.1 6.2 118 121-251 83-207 (694)
254 KOG0751|consensus 89.3 1.1 2.4E-05 50.3 7.7 93 113-210 109-209 (694)
255 COG0584 UgpQ Glycerophosphoryl 89.0 0.38 8.2E-06 51.3 3.9 38 292-329 19-56 (257)
256 KOG3565|consensus 89.0 0.12 2.6E-06 61.6 -0.0 58 783-841 577-637 (640)
257 KOG2258|consensus 88.7 0.53 1.1E-05 52.4 4.8 39 293-331 83-121 (341)
258 cd08560 GDPD_EcGlpQ_like_1 Gly 88.5 0.44 9.6E-06 53.2 4.0 40 291-330 29-69 (356)
259 KOG2562|consensus 87.1 3.2 7E-05 46.7 9.5 118 114-254 227-346 (493)
260 KOG0040|consensus 86.5 1.7 3.8E-05 54.8 7.6 86 143-228 2246-2344(2399)
261 PF08239 SH3_3: Bacterial SH3 85.5 1.2 2.6E-05 35.1 3.9 36 802-838 18-55 (55)
262 KOG0041|consensus 84.8 1.8 4E-05 43.3 5.5 51 191-248 110-160 (244)
263 KOG1955|consensus 84.6 1.9 4.1E-05 48.5 6.1 70 107-179 227-297 (737)
264 PF14603 hSH3: Helically-exten 84.0 1.9 4.1E-05 37.4 4.6 46 797-842 29-74 (89)
265 smart00054 EFh EF-hand, calciu 83.7 1.6 3.6E-05 28.0 3.5 26 115-140 3-29 (29)
266 KOG4666|consensus 83.5 3.9 8.4E-05 44.0 7.6 99 112-210 259-361 (412)
267 cd01233 Unc104 Unc-104 pleckst 82.4 2.2 4.8E-05 38.4 4.8 34 61-98 65-98 (100)
268 PRK12309 transaldolase/EF-hand 82.4 2.5 5.5E-05 47.8 6.3 57 141-208 328-385 (391)
269 KOG1856|consensus 82.4 2.2 4.9E-05 52.8 6.1 75 664-739 1111-1194(1299)
270 cd01257 PH_IRS Insulin recepto 81.8 3.5 7.5E-05 37.3 5.8 55 25-96 46-100 (101)
271 PF09279 EF-hand_like: Phospho 81.8 2.9 6.4E-05 36.1 5.2 42 115-156 3-46 (83)
272 PF05386 TEP1_N: TEP1 N-termin 80.8 0.37 7.9E-06 32.3 -0.6 14 350-363 8-21 (30)
273 cd08603 GDPD_SHV3_repeat_1 Gly 80.4 2 4.2E-05 46.8 4.3 40 292-331 14-55 (299)
274 cd01265 PH_PARIS-1 PARIS-1 ple 79.8 3.4 7.4E-05 36.8 5.0 54 25-97 40-93 (95)
275 KOG0199|consensus 79.7 1.7 3.8E-05 51.3 3.8 51 787-838 377-430 (1039)
276 PTZ00268 glycosylphosphatidyli 78.7 16 0.00035 40.9 10.8 102 300-409 91-204 (380)
277 smart00287 SH3b Bacterial SH3 78.7 3.1 6.8E-05 33.6 4.1 36 802-837 26-61 (63)
278 KOG3812|consensus 78.5 0.81 1.8E-05 49.0 0.7 49 786-834 60-117 (475)
279 cd01242 PH_ROK Rok (Rho- assoc 78.2 5.5 0.00012 36.3 5.7 37 60-98 74-110 (112)
280 PF05517 p25-alpha: p25-alpha 78.0 7.3 0.00016 38.2 7.1 64 115-178 2-72 (154)
281 PF15409 PH_8: Pleckstrin homo 77.4 5.2 0.00011 35.3 5.2 33 60-96 55-87 (89)
282 cd01251 PH_centaurin_alpha Cen 77.4 4.9 0.00011 36.4 5.3 61 26-99 38-101 (103)
283 PF02762 Cbl_N3: CBL proto-onc 77.3 6.9 0.00015 33.0 5.5 45 661-705 3-48 (86)
284 KOG0042|consensus 76.9 3.6 7.8E-05 47.5 5.1 66 113-178 594-660 (680)
285 PF00018 SH3_1: SH3 domain; I 76.5 1.2 2.5E-05 34.2 0.9 39 431-480 9-48 (48)
286 cd00900 PH-like Pleckstrin hom 76.2 7.4 0.00016 33.3 6.2 54 29-96 45-98 (99)
287 cd01250 PH_centaurin Centaurin 76.2 4.3 9.3E-05 35.4 4.6 31 61-95 62-92 (94)
288 KOG0035|consensus 75.2 5.8 0.00013 48.7 6.6 91 114-204 749-848 (890)
289 KOG4306|consensus 73.7 13 0.00028 40.2 8.0 85 301-387 74-163 (306)
290 PRK10884 SH3 domain-containing 73.6 4 8.7E-05 41.9 4.2 40 801-840 48-88 (206)
291 cd01245 PH_RasGAP_CG5898 RAS G 71.9 11 0.00024 33.9 6.0 59 23-96 39-97 (98)
292 cd01246 PH_oxysterol_bp Oxyste 71.2 7.3 0.00016 33.7 4.8 33 61-96 58-90 (91)
293 PF12763 EF-hand_4: Cytoskelet 70.4 13 0.00027 33.9 6.2 77 192-282 21-97 (104)
294 PF02762 Cbl_N3: CBL proto-onc 70.1 18 0.0004 30.5 6.3 45 502-549 3-47 (86)
295 KOG4666|consensus 70.1 7 0.00015 42.1 5.0 102 147-256 259-364 (412)
296 cd01247 PH_GPBP Goodpasture an 70.0 10 0.00023 33.4 5.5 33 61-96 58-90 (91)
297 cd08621 PI-PLCXDc_like_2 Catal 69.3 10 0.00022 41.5 6.4 91 269-360 6-113 (300)
298 cd01260 PH_CNK Connector enhan 68.1 7.7 0.00017 34.4 4.3 33 61-96 63-95 (96)
299 KOG4065|consensus 67.8 11 0.00024 34.5 5.0 55 117-171 72-141 (144)
300 PF10591 SPARC_Ca_bdg: Secrete 66.7 2.9 6.3E-05 38.6 1.3 60 143-203 50-111 (113)
301 KOG3705|consensus 66.7 4.5 9.8E-05 44.5 2.9 55 785-839 510-565 (580)
302 cd01219 PH_FGD FGD (faciogenit 65.9 12 0.00026 33.7 5.1 35 61-99 66-100 (101)
303 cd01220 PH_CDEP Chondrocyte-de 64.8 14 0.00029 33.4 5.2 34 61-98 64-97 (99)
304 PF05042 Caleosin: Caleosin re 63.3 30 0.00065 34.3 7.6 35 117-151 12-47 (174)
305 cd01254 PH_PLD Phospholipase D 61.6 24 0.00051 33.0 6.4 66 26-96 55-120 (121)
306 PRK09071 hypothetical protein; 58.5 34 0.00073 37.9 7.9 24 320-343 106-131 (323)
307 cd01252 PH_cytohesin Cytohesin 55.9 23 0.00049 33.2 5.3 25 75-99 90-114 (125)
308 KOG3508|consensus 55.4 4.4 9.6E-05 49.7 0.4 55 659-713 80-135 (932)
309 cd01222 PH_clg Clg (common-sit 53.4 37 0.0008 30.5 5.9 38 60-98 58-95 (97)
310 smart00743 Agenet Tudor-like d 52.4 18 0.00038 29.1 3.4 23 802-824 2-24 (61)
311 PF06347 SH3_4: Bacterial SH3 52.1 27 0.00058 27.4 4.3 35 801-837 19-53 (55)
312 PRK08136 glycosyl transferase 49.7 66 0.0014 35.5 8.3 25 319-343 108-133 (317)
313 COG3103 SH3 domain protein [Si 49.0 24 0.00052 36.2 4.5 55 787-841 29-89 (205)
314 KOG3667|consensus 47.4 27 0.00058 41.6 5.1 81 657-738 560-644 (682)
315 KOG2059|consensus 46.3 26 0.00057 41.7 4.7 63 22-99 603-665 (800)
316 PF15413 PH_11: Pleckstrin hom 45.2 44 0.00096 30.7 5.3 33 60-96 79-111 (112)
317 KOG3866|consensus 44.9 46 0.00099 35.7 5.8 88 118-208 250-354 (442)
318 PRK13914 invasion associated s 44.8 26 0.00057 40.5 4.4 39 801-839 103-141 (481)
319 cd01256 PH_dynamin Dynamin ple 43.4 37 0.0008 30.4 4.1 34 62-95 65-102 (110)
320 PRK07394 hypothetical protein; 43.4 87 0.0019 35.0 8.2 24 320-343 112-138 (342)
321 KOG3580|consensus 40.9 1E+02 0.0023 36.1 8.2 134 682-834 406-562 (1027)
322 KOG1785|consensus 40.0 37 0.0008 37.6 4.4 46 660-705 256-302 (563)
323 PF14604 SH3_9: Variant SH3 do 38.9 14 0.00031 28.4 0.8 39 431-481 8-46 (49)
324 KOG4065|consensus 38.4 1.2E+02 0.0027 27.9 6.7 79 143-247 62-141 (144)
325 PF05517 p25-alpha: p25-alpha 38.4 59 0.0013 31.8 5.2 55 191-250 13-68 (154)
326 cd01218 PH_phafin2 Phafin2 Pl 37.4 76 0.0017 28.9 5.4 38 61-102 65-102 (104)
327 KOG1707|consensus 37.3 2.2E+02 0.0048 33.8 10.2 69 110-179 194-269 (625)
328 KOG0169|consensus 36.8 94 0.002 37.7 7.4 113 127-250 112-231 (746)
329 cd01232 PH_TRIO Trio pleckstri 36.8 91 0.002 28.9 5.9 40 60-99 73-113 (114)
330 PRK07259 dihydroorotate dehydr 36.5 87 0.0019 34.1 6.9 77 289-377 97-180 (301)
331 PF11302 DUF3104: Protein of u 35.9 40 0.00087 28.6 3.0 25 800-824 3-33 (75)
332 KOG3667|consensus 33.6 59 0.0013 38.9 5.0 56 498-558 560-616 (682)
333 PRK14607 bifunctional glutamin 33.0 1.4E+02 0.003 35.6 8.2 24 320-343 296-320 (534)
334 KOG4578|consensus 32.9 28 0.0006 37.7 2.0 57 117-173 338-396 (421)
335 KOG3555|consensus 31.8 49 0.0011 36.1 3.7 53 117-173 255-308 (434)
336 KOG4384|consensus 31.4 31 0.00067 37.9 2.2 58 786-844 138-197 (361)
337 PF11116 DUF2624: Protein of u 31.3 1.7E+02 0.0036 25.7 6.1 51 126-176 13-63 (85)
338 KOG2243|consensus 30.4 74 0.0016 40.6 5.1 56 118-174 4063-4119(5019)
339 PF11422 IBP39: Initiator bind 30.0 1.5E+02 0.0033 29.5 6.3 86 196-285 36-139 (181)
340 cd01253 PH_beta_spectrin Beta- 29.7 99 0.0021 27.6 5.0 33 61-96 71-103 (104)
341 PF15406 PH_6: Pleckstrin homo 29.6 1.6E+02 0.0034 27.0 5.9 48 27-95 63-110 (112)
342 cd02810 DHOD_DHPD_FMN Dihydroo 29.4 1.6E+02 0.0035 31.7 7.5 88 287-384 102-194 (289)
343 PF00977 His_biosynth: Histidi 29.0 1E+02 0.0023 32.1 5.7 48 309-362 125-172 (229)
344 KOG0705|consensus 28.9 41 0.00089 39.2 2.7 36 58-96 442-477 (749)
345 smart00557 IG_FLMN Filamin-typ 28.9 74 0.0016 28.0 3.9 27 525-551 53-79 (93)
346 KOG4251|consensus 28.3 1.2E+02 0.0026 31.6 5.6 19 155-173 289-307 (362)
347 cd01243 PH_MRCK MRCK (myotonic 28.1 61 0.0013 30.2 3.2 25 75-99 96-120 (122)
348 PLN02641 anthranilate phosphor 27.3 1.7E+02 0.0037 32.7 7.2 24 320-343 103-127 (343)
349 PF15411 PH_10: Pleckstrin hom 27.2 1.3E+02 0.0029 27.9 5.3 53 28-94 64-116 (116)
350 KOG1314|consensus 26.6 42 0.00092 36.7 2.2 48 796-844 329-387 (414)
351 PF10223 DUF2181: Uncharacteri 26.2 1.3E+02 0.0029 31.8 5.7 52 293-344 11-68 (244)
352 cd08576 GDPD_like_SMaseD_PLD G 25.8 1.1E+02 0.0024 32.8 5.1 52 295-346 9-67 (265)
353 PF14513 DAG_kinase_N: Diacylg 25.2 48 0.001 31.8 2.0 78 194-282 5-84 (138)
354 PLN02591 tryptophan synthase 24.5 43 0.00093 35.6 1.8 84 298-385 20-112 (250)
355 cd01227 PH_Dbs Dbs (DBL's big 23.5 1.8E+02 0.0039 27.8 5.5 39 60-100 79-117 (133)
356 PF14513 DAG_kinase_N: Diacylg 23.4 70 0.0015 30.7 2.8 32 196-228 48-79 (138)
357 KOG0046|consensus 23.2 1.2E+02 0.0027 35.2 5.0 27 218-249 57-83 (627)
358 cd01241 PH_Akt Akt pleckstrin 23.1 1.4E+02 0.0031 26.7 4.7 36 62-97 66-101 (102)
359 KOG2421|consensus 22.5 19 0.00042 41.2 -1.3 61 266-329 309-382 (417)
360 PF11478 Tachystatin_B: Antimi 22.3 31 0.00068 24.3 0.2 12 299-310 1-12 (42)
361 PTZ00466 actin-like protein; P 21.7 98 0.0021 35.1 4.1 49 334-382 83-136 (380)
362 PF07753 DUF1609: Protein of u 21.3 71 0.0015 32.3 2.4 41 287-327 103-149 (230)
363 cd08627 PI-PLCc_gamma1 Catalyt 21.2 41 0.00089 35.0 0.8 17 2-18 136-152 (229)
364 KOG3723|consensus 21.1 55 0.0012 38.1 1.8 57 30-102 781-840 (851)
365 PF12738 PTCB-BRCT: twin BRCT 21.0 77 0.0017 25.4 2.3 29 279-311 32-60 (63)
366 KOG4347|consensus 20.4 1.1E+02 0.0023 36.6 3.9 33 147-179 555-587 (671)
No 1
>KOG1264|consensus
Probab=100.00 E-value=3.7e-166 Score=1364.47 Aligned_cols=752 Identities=54% Similarity=0.958 Sum_probs=676.5
Q ss_pred cccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHhhhhccCC
Q psy8789 26 IAKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLVPDTLRAP 105 (851)
Q Consensus 26 k~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~~~~~~~~ 105 (851)
|.++.|+|..|||||+|+.+++|+++++ .-+..+++||+|.||+.|++++|.+||.++++++.|+.||.+++.+.+.++
T Consensus 59 k~egai~i~eikeirpgk~skdfdry~~-~fr~k~s~cfvil~gt~f~lktls~vatse~e~n~w~~glkw~~~dtl~a~ 137 (1267)
T KOG1264|consen 59 KIEGAIDIREIKEIRPGKNSKDFDRYKR-AFRQKESCCFVILYGTQFVLKTLSLVATSEEEANNWLSGLKWLHQDTLNAP 137 (1267)
T ss_pred hhcceeeeeeeeeccCCccchhHHHHHH-HhccccceeEEEeeCcEEEeeeeehhhhhhHHHHHHhhcchhhhhhhccCC
Confidence 5788999999999999999999999876 445678999999999999999999999999999999999999999999999
Q ss_pred ChhhHHHHHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHH-HHHhhhcCCCCCCcCHHHHHHHHHhhhcccccc
Q psy8789 106 YPLNVERWLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLR-EHFQEVDTRKTNELAFDEFSILYNRIMFDEQMF 183 (851)
Q Consensus 106 ~~~~~~~wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~-~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~ 183 (851)
+++++++|+++++.++|... ..|+.++++..|.+.+++++..... +.|.+ |..+++.|+|++|..+|+.++......
T Consensus 138 ~p~qI~~wlrk~~ysvd~~~~~~isard~k~~l~qvn~k~~~~kfl~e~~te-d~~~k~dlsf~~f~~ly~~lmfs~~~a 216 (1267)
T KOG1264|consen 138 TPLQIERWLRKQIYSVDQTRENSISARDLKTILPQVNFKVSSAKFLKEKFTE-DGARKDDLSFEQFHLLYKKLMFSQQKA 216 (1267)
T ss_pred ChHHHHHHHHhhheeccchhhhheeHHhhhcccccceEEechHHHHHHHHhH-hhhccccccHHHHHHHHHHHhhccchh
Confidence 99999999999999999888 8999999999999999999987655 88887 555788999999999999988754332
Q ss_pred c-ccc----c---cccCCCCccCHHHHHHHHHHhcCcCcCCH-HHHHHHHHHhccccccccCCCcccHHHHHHHHhCcCc
Q psy8789 184 T-DSY----S---HYSSDGQTVTASELTNFLIREQNETNVNE-REVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFSKQN 254 (851)
Q Consensus 184 ~-~~f----~---~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~-~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S~~n 254 (851)
. ..| . .++.+...++..||++||..+|.+.++++ ..++++|++|..|..++.+++.|+++||+.||+|.+|
T Consensus 217 ~l~e~~~~~~~~~~~~~d~~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D~~re~~EPyl~v~EFv~fLFSreN 296 (1267)
T KOG1264|consen 217 ILLEFKKDFILGNTDRPDASVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDDTMRETAEPYLFVDEFVTFLFSREN 296 (1267)
T ss_pred hhhcccchhhhcCCCCccceEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhhhhhhccCcceeHHHHHHHHhhccc
Confidence 2 112 1 34455567999999999999999999887 6789999999888888888999999999999999999
Q ss_pred chhhhhccccccC-cCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceee
Q psy8789 255 ELWDQQYDAIHQD-MTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTK 333 (851)
Q Consensus 255 ~~~~~~~~~~~~d-m~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~ 333 (851)
++||++.+.|+.| |+.|||||||+||||||||||||.++||.|+|+|||++|||||||||||||||-||||||||+|||
T Consensus 297 slWd~k~d~V~~d~Mn~PLShYWIsSSHNTYLTGDQlrSESSleaYar~LrMGCRCIELDCWdGpd~~pvIyHG~T~TtK 376 (1267)
T KOG1264|consen 297 SLWDSKYDAVDMDDMNNPLSHYWISSSHNTYLTGDQLRSESSLEAYARCLRMGCRCIELDCWDGPDGKPVIYHGHTRTTK 376 (1267)
T ss_pred ccccccccccchhhhcCcchhheeeccCcceecccccccccCHHHHHHHHHhCCeEEEeecccCCCCCceEEeccceeee
Confidence 9999999999655 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eehHHHHHHHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhcccccccccCC
Q psy8789 334 IKFKDVVKTIRDHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGKILLKHKKLP 413 (851)
Q Consensus 334 i~~~~v~~~i~~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~kilik~k~~~ 413 (851)
|.|.|||++||+|||++|.||||||||.|||++||+.||+.+++||||+|++.|.+.++..||||.+||.|||||+||+|
T Consensus 377 Ikf~DVlhtIkdhAFvtSeyPVILSIEd~CSv~qQR~mAq~~keV~GD~LLTkP~er~~~qLPSP~qLrrKIiiKHKKLp 456 (1267)
T KOG1264|consen 377 IKFDDVLHTIKDHAFVTSEYPVILSIEDHCSVEQQRNMAQAFKEVFGDLLLTKPTERSADQLPSPSQLRRKIIIKHKKLP 456 (1267)
T ss_pred eehHHHHHHHHhhceeccCCcEEEEhhhcCChHHHHHHHHHHHHHHhhHHhcCcccchhhcCCCHHHHhhhHhhhcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccccccccccccccccccceeEeecCeEEEEcCccchhhhhhhhhhhcC-cccccceeccCC------cccccc
Q psy8789 414 EGSDEQTPCAIAKDEGKLAEDKIKHCRIRVEGRLYTIGTTQFESLVELISYYERH-PLYKKIELWYPV------SEDLIQ 486 (851)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~~g~~~~~~~~~F~sL~~li~~w~~~-~~~~~~~~~~~~------~~~~~~ 486 (851)
+.++.. +.+-+ .+++... .+| +|.+|++|+. + +.|..| +++++++++|.. ++.+++
T Consensus 457 ~~edva--~~m~~-----~edd~~n-svk-~GiLy~kd~v------d--heWt~h~fvlt~~kl~ys~e~~~~~n~ndee 519 (1267)
T KOG1264|consen 457 PREDVA--VNMED-----KEDDHKN-SVK-QGILYMKDPV------D--HEWTRHYFVLTDAKLSYSDEIEQTENPNDEE 519 (1267)
T ss_pred chhhhc--hhhhc-----ccccchh-hhh-cceEEEecCC------C--CceeeeEEEEecceeEeehhccCcCCCCccc
Confidence 843222 22222 2344443 366 9999999999 9 999999 999999999975 223334
Q ss_pred ccCCCCCCCCCCCCCCccCCCCCCCHHHHHHHHhccC---CCCCceEEeeecCCCCCcEEEEEEeCCeeeEEEEeeecCC
Q psy8789 487 RMGLGVPNDELHFGEKWFHGRLSGGRAEAEDLLRRYS---HLGDGTFLVRESETFIGDYSLSFWWQGRVNHCRIRSKPES 563 (851)
Q Consensus 487 ~~~~~~~~~~~~~~~~WyhG~is~~R~~Ae~lL~~~~---~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~ 563 (851)
...+..+..+.|..+.||||++- ||.+|+.+|+..| |+++|+||||+|++..|+|+||++.+|+|+|++|+.+.++
T Consensus 520 ~~kd~s~s~ElH~~E~WFHgkle-~R~eAekll~eycke~G~~dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~ 598 (1267)
T KOG1264|consen 520 VPKDISPSTELHFGEKWFHGKLE-GRTEAEKLLQEYCKETGGKDGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEG 598 (1267)
T ss_pred ccccCCcchhhccchhhhhcccc-cchHHHHHHHHHHHHhCCCCccEEEeeccccccceeeeeeECCceeeEEEEeeecC
Confidence 45555566889999999999997 5999999998875 6789999999999999999999999999999999988887
Q ss_pred C--cEEeccCceecChHHHHHHHhhcCCCCCcceeEecCCCCCCCCccccccccccccchhhhhhhhcccCCCceeeecC
Q psy8789 564 G--QFYLVEKSYFDSLYSLISHYRTNHLRSQEFLITLQEPVPQPNQHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPS 641 (851)
Q Consensus 564 g--~~~~~~~~~F~sl~eLI~~y~~~~l~~~gl~~~L~~p~~~~~~~~~~~~~~~~l~~~~ae~~l~~v~~dG~flvr~~ 641 (851)
| +||+.++..|+||.+||.||+++.|+++.+..+|+.|||+|.||..
T Consensus 599 gt~Kyyl~dN~vfdslY~LI~~Y~~~~Lr~aeF~m~LtePvPqp~~He~------------------------------- 647 (1267)
T KOG1264|consen 599 GTLKYYLTDNLVFDSLYALIQHYRETHLRCAEFEMRLTEPVPQPNPHES------------------------------- 647 (1267)
T ss_pred CceeEEEecchhHHHHHHHHHHHHhccccccceEEEecCCCCCCCcccC-------------------------------
Confidence 7 4999999999999999999999999999999999999999887653
Q ss_pred CCCCCCCCCCCCCCCCCCCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCCeeeEEEEEEcCcEEEe
Q psy8789 642 ENDNSSYEPVPQPNQHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAEDKIKHCRIRVEGRLYTI 721 (851)
Q Consensus 642 ~~~~~~~~p~~~~~~~~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~~ 721 (851)
++|||...+|++||.+|+..+.+|+||||.++ .++.|+||++.+++++||+|.++|..|.+
T Consensus 648 ------------------k~W~~as~treqAE~mL~rvp~DGaFLiR~~~-~~nsy~iSfr~~gkikHcRi~rdGr~fvl 708 (1267)
T KOG1264|consen 648 ------------------KPWYHASLTREQAEDMLMRVPRDGAFLIRKRE-GSNSYAISFRARGKIKHCRINRDGRHFVL 708 (1267)
T ss_pred ------------------CccccccccHHHHHHHHhhCccCcceEEEecc-CCceEEEEEEEcCcEeEEEEccCceEEEe
Confidence 57888888999999999988889999999554 48899999999999999999999999999
Q ss_pred CCcccCCHHHHHHHhhhCCCccceeecCCCcHhHHhhcCCCCCCCCCC----CCCCCCCCCCCCCCceEEEEEEeecCCC
Q psy8789 722 GTTQFESLVELISYYERHPLYKKIELWYPVSEDLIQRMGLEPDDNTVS----GTPGYMDPASFTPASITVKALYDYQARN 797 (851)
Q Consensus 722 ~~~~F~sl~eLV~~y~~~~l~~~~~L~~Pv~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~al~dy~~~~ 797 (851)
+...|+||.+||.||.++++...++|++||+++.+++++++.+.++.+ .|+.|++.++..+ .+.|+|||+|.|+.
T Consensus 709 ~t~~FesLv~lv~yY~k~~lyR~mkLr~PVnee~l~~~~~e~d~~a~~d~~r~pg~yme~n~~~~-~vt~kAL~~Yka~r 787 (1267)
T KOG1264|consen 709 GTSAFESLVELVSYYEKHPLYRKMKLRYPVNEELLERYNTERDINALYDVSRMPGDYMEINPSMP-QVTVKALYDYKAKR 787 (1267)
T ss_pred ccHHHHHHHHHHHHHhcChhhhcccccCcCCHHHHHHhhhhcccccccccccCCCCccccCcccc-chhhhhhhccccCC
Confidence 999999999999999999999999999999999999999887766654 4788888776443 57899999999999
Q ss_pred CCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCccccCCCCCCCC
Q psy8789 798 DDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEIEPQHNRED 848 (851)
Q Consensus 798 ~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i~~~~~~~~ 848 (851)
++||+|.+|.+|+++++.++|||.|.++|..++|||+|||++|.++...++
T Consensus 788 ~DELSFpk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~~~~~~~ 838 (1267)
T KOG1264|consen 788 SDELSFPKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEISTADFEEL 838 (1267)
T ss_pred cccccccccceeEeeeccCCceeecccccceeeeccHHHhhhhccccccch
Confidence 999999999999999999999999999998889999999999988665443
No 2
>KOG0169|consensus
Probab=100.00 E-value=6.5e-97 Score=831.32 Aligned_cols=385 Identities=37% Similarity=0.667 Sum_probs=354.9
Q ss_pred ccCcccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHhhhhc
Q psy8789 23 PCAIAKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLVPDTL 102 (851)
Q Consensus 23 ~~~k~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~~~~~ 102 (851)
++.+.+..++|++|++||.|++++.+|+...+ ..++|||+|+|+. +.++|+|+|++++++++||+||++|+...-
T Consensus 52 ~~~~~~~~~~i~~i~~vr~g~~t~~lr~~~~~---~~~~~~fsi~~~~--~~e~ldl~a~s~~~a~~wV~gl~~l~s~~~ 126 (746)
T KOG0169|consen 52 NRDPNKAKVSISEIEEVRSGKQTENLRSLARD---LPEDRCFSIIFKD--RYESLDLIANSKEDANIWVSGLRKLISRSK 126 (746)
T ss_pred cCCchhcccchhhhHHHhccccchhhHHHHHh---cCcceeEEEEecc--ccccccccCCCHHHHHHHhhhHHHHHhccc
Confidence 44445556999999999999999999985544 6799999999976 569999999999999999999999998655
Q ss_pred cCCChhhHHHHHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcccc
Q psy8789 103 RAPYPLNVERWLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQ 181 (851)
Q Consensus 103 ~~~~~~~~~~wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~ 181 (851)
........++|+...|..+|+++ |.++++++..+++.+|+.++..++..+|+++|...++.+..++|..|+..+..+++
T Consensus 127 ~~~~~~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~rpe 206 (746)
T KOG0169|consen 127 SMRQRSRREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKRPE 206 (746)
T ss_pred hhhhcchHHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccCch
Confidence 44444556889999999999999 99999999999999999999999999999999888999999999999999998873
Q ss_pred ccccccccccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhCcCcchhhhhc
Q psy8789 182 MFTDSYSHYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFSKQNELWDQQY 261 (851)
Q Consensus 182 ~~~~~f~~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S~~n~~~~~~~ 261 (851)
....|..++.+.++|+.++|.+||..+|++..++.+.|++||++|++.... ...+.|++|+|.+||+|.++++|||.+
T Consensus 207 -v~~~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~-~~~~~l~ldgF~~yL~S~~~~~fdp~~ 284 (746)
T KOG0169|consen 207 -VYFLFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEF-RRHGLLSLDGFTRYLFSPDCNPFDPIH 284 (746)
T ss_pred -HHHHHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhc-cccceecHHHHHHHhcCccCCCCCccc
Confidence 334455677778899999999999999999999999999999999875441 234779999999999999999999999
Q ss_pred cccccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHH
Q psy8789 262 DAIHQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVK 341 (851)
Q Consensus 262 ~~~~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~ 341 (851)
..|+|||++|||||||+||||||||||||.|+||+|+||+||++||||||||||||++|||||||||||||+|.|++||+
T Consensus 285 ~~V~qDM~qPLsHYFI~SSHNTYLtg~Ql~g~sSvegyI~ALk~GcR~vElD~Wdg~~~epvV~HG~TlTs~I~l~~vl~ 364 (746)
T KOG0169|consen 285 RKVHQDMDQPLSHYFISSSHNTYLTGDQLGGPSSVEGYIRALKKGCRCVELDCWDGPNGEPVVYHGHTLTSKILLRDVLR 364 (746)
T ss_pred chhhhcccCcchhheEeccccceecccccCCccccHHHHHHHHhCCeEEEEecccCCCCCeeEecCcccccceeHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhcccccccccCCC
Q psy8789 342 TIRDHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGKILLKHKKLPE 414 (851)
Q Consensus 342 ~i~~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~kilik~k~~~~ 414 (851)
|||+|||++|+|||||||||||+++||++||++|++||||+||..|.+.....||||++||||||||+||++.
T Consensus 365 aIk~~AF~~S~YPvIlsLE~Hc~~~qQ~~mA~~~~~ifGd~Ly~~~~~~~~~~lPSPe~LK~KILik~Kk~~~ 437 (746)
T KOG0169|consen 365 AIKKYAFVTSPYPVILTLENHCSPDQQAKMAQMLKEIFGDMLYTPPPDSSLKELPSPEELKNKILIKGKKLKE 437 (746)
T ss_pred HHHHhcccCCCCCEEEEecccCCHHHHHHHHHHHHHHhhhheeccCCCCccccCcCHHHHhcCEEEecCCCCc
Confidence 9999999999999999999999999999999999999999999999888889999999999999999999985
No 3
>KOG1265|consensus
Probab=100.00 E-value=5.9e-87 Score=744.48 Aligned_cols=382 Identities=32% Similarity=0.545 Sum_probs=317.6
Q ss_pred CcccCeEEceeehhhhcCCCcccccc-----C--cccccCCCCCcEEEEEECCCc-ceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 25 AIAKDEVDMREVKEVRVGKCFKDFDR-----W--PEESGRVDAARCFIVLYGSEF-KLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 25 ~k~~~~i~i~~I~eIR~G~~s~~f~~-----~--~~~~~~~~e~~~ftIiyg~~~-~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
+|+...+||..|++.|+|..++--.. . ...+++..+++.+|||+|.++ ++++++|||..++++++|..||..
T Consensus 53 ~~e~~~ldi~~i~d~r~g~~a~~pkd~klr~~~~~~~~d~s~eek~lTVvsG~d~vN~~f~nfv~~~~~~ak~w~~~~~~ 132 (1189)
T KOG1265|consen 53 NKEVDNLDISSIRDARTGRYAKLPKDPKLREVLELGPPDRSLEEKTLTVVSGPDLVNLTFLNFVAMQENVAKLWTAGLLK 132 (1189)
T ss_pred CCceeehhhhHHhhhhcchhccCCCCcccchheecCCcccccccceEEEEecCCcccceEEEEeeeeHHHHHHHHHHHHH
Confidence 45667899999999999966542111 0 011223458899999999987 489999999999999999999999
Q ss_pred Hhhhhcc--CCChhhHHHHHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhh-------cCCCCCCcCH
Q psy8789 97 LVPDTLR--APYPLNVERWLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEV-------DTRKTNELAF 166 (851)
Q Consensus 97 L~~~~~~--~~~~~~~~~wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~-------D~~~~g~L~f 166 (851)
|+.+.+. ++...+..+... ...+..+. |+|.++.|.+++.+-. .+..+......+ |.-....++|
T Consensus 133 l~~~~~~~n~s~~~fl~K~~t--klkmqvn~~grip~knI~k~F~~~k---~~KrVe~al~~~gLp~~k~dsI~~d~f~~ 207 (1189)
T KOG1265|consen 133 LAKSLLARNASRLTFLFKAHT--KLKMQVNFEGRIPVKNIIKTFSADK---KEKRVEKALEACGLPSGKNDSIEPDDFTL 207 (1189)
T ss_pred HHHHHHHhhcchhHHHHHHHH--hhhhcccccccccHHHHHHHhhcCC---chhHHHHHHHhcCCCCCCcCccChhhccH
Confidence 9987543 333333222111 11223344 9999999999987632 223444333332 2222346789
Q ss_pred HHHHHHHHhhhccccccccccccc-cCCCCccCHHHHHHHHHHhcCcCcCCH--------HHHHHHHHHhccccccccCC
Q psy8789 167 DEFSILYNRIMFDEQMFTDSYSHY-SSDGQTVTASELTNFLIREQNETNVNE--------REVSRHMRDYLQDEQRNVQE 237 (851)
Q Consensus 167 ~EF~~~~~~l~~r~~~~~~~f~~~-~~~~~~lt~~ef~~FL~~~Q~e~~~s~--------~~~~~li~~~d~d~~~~~~~ 237 (851)
+.|..|+..++.|++.+ .+|... .+...+||.++|.+||++.|+++++++ .++..||.+|+++.+. ...
T Consensus 208 e~f~~~l~klcpR~eie-~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~-a~~ 285 (1189)
T KOG1265|consen 208 EKFYRLLNKLCPRPEIE-EIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDN-AEK 285 (1189)
T ss_pred HHHHHHHHhcCCchhHH-HHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhh-hhc
Confidence 99999999999998754 445433 344489999999999999999999887 7899999999998763 346
Q ss_pred CcccHHHHHHHHhCcCcchhhhhccccccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecC
Q psy8789 238 PYFTFMEFIDFLFSKQNELWDQQYDAIHQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDG 317 (851)
Q Consensus 238 g~ls~deF~~fL~S~~n~~~~~~~~~~~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg 317 (851)
|+|+.+||++||++++|.|+.+.....++||+||||||||||||||||||+||.|.||||||++||+.||||||||||||
T Consensus 286 gqms~dgf~ryl~gdEn~i~a~~~l~l~~dM~qPl~hYFINSSHNTYlTg~Ql~g~sSvEmYRQvLLsGcRCVELDcWdg 365 (1189)
T KOG1265|consen 286 GQMSTDGFVRYLMGDENAIVALDKLDLVTDMDQPLSHYFINSSHNTYLTGGQLGGKSSVEMYRQVLLSGCRCVELDCWDG 365 (1189)
T ss_pred cccchhhhHHHhhCCccccccHHHHHhhhhhccchhhhhccccccceeecccccCcchHHHHHHHHHhcCceEEeeeecC
Confidence 99999999999999999999988888899999999999999999999999999999999999999999999999999998
Q ss_pred --CCCCceEeecCCceeeeehHHHHHHHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCC----
Q psy8789 318 --PDGTPIVYHGHTLTTKIKFKDVVKTIRDHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKN---- 391 (851)
Q Consensus 318 --~~~~p~v~hg~t~t~~i~~~~v~~~i~~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~---- 391 (851)
+++||||+||+|||+.|.|+|||+||++.||+||+||||||+|||||+.||.+||+||++||||+|++.|++..
T Consensus 366 k~~d~EPvITHG~tm~teI~fKdVleAIaEtAFkTSpyPVILSfENH~s~kQQaKMa~ycr~IFGDmLL~~PLe~~PL~p 445 (1189)
T KOG1265|consen 366 KGEDEEPVITHGFTMTTEIFFKDVLEAIAETAFKTSPYPVILSFENHCSPKQQAKMAEYCRDIFGDMLLTEPLEDYPLEP 445 (1189)
T ss_pred CCCCCCceeecccchhhhhhHHHHHHHHHHhhccCCCCceEEeecccCCHHHHHHHHHHHHHHHHHHHhcCccccCCCCC
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999863
Q ss_pred CCCCCChhhhhcccccccccCC
Q psy8789 392 ETVLPSPHQLRGKILLKHKKLP 413 (851)
Q Consensus 392 ~~~lpsp~~l~~kilik~k~~~ 413 (851)
..+||||+.||+|||||+||..
T Consensus 446 gv~lPsP~~Lr~KILIKnKKk~ 467 (1189)
T KOG1265|consen 446 GVPLPSPEDLRRKILIKNKKKH 467 (1189)
T ss_pred CCCCCCHHHHhhhhhccccccc
Confidence 5799999999999999999874
No 4
>PLN02952 phosphoinositide phospholipase C
Probab=100.00 E-value=9.1e-74 Score=651.05 Aligned_cols=251 Identities=32% Similarity=0.569 Sum_probs=219.4
Q ss_pred CCCCcCHHHHHHHHHhhhc-----cccccccccccccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhcccc--c
Q psy8789 160 KTNELAFDEFSILYNRIMF-----DEQMFTDSYSHYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDE--Q 232 (851)
Q Consensus 160 ~~g~L~f~EF~~~~~~l~~-----r~~~~~~~f~~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~--~ 232 (851)
+.|.++|++|..|++.+.. |++ ....|..++.+++.||.++|.+||.++|++...+.++|++||.++.... .
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~e-i~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~ 91 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDD-VKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHV 91 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHH-HHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccc
Confidence 4689999999999988753 332 2345666666667899999999999999998888888999988764211 1
Q ss_pred cccCCCcccHHHHHHHHhCcCcchhhhhccccccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEE
Q psy8789 233 RNVQEPYFTFMEFIDFLFSKQNELWDQQYDAIHQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIEL 312 (851)
Q Consensus 233 ~~~~~g~ls~deF~~fL~S~~n~~~~~~~~~~~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcvel 312 (851)
.....+.|++++|+.||+|++ +++|.+..|+|||++|||||||||||||||+|+||.|+||+|+|++||++|||||||
T Consensus 92 ~~~~~~~l~~~~F~~~l~s~~--~~~p~~~~v~qdm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvEl 169 (599)
T PLN02952 92 TRYTRHGLNLDDFFHFLLYDD--LNGPITPQVHHDMTAPLSHYFIYTGHNSYLTGNQLSSDCSEVPIVKALQRGVRVIEL 169 (599)
T ss_pred ccccccCcCHHHHHHHHcCcc--ccccccccccccCCCchhhheeeccccccccCCccCCcCCHHHHHHHHHcCCcEEEE
Confidence 111235799999999999875 566777789999999999999999999999999999999999999999999999999
Q ss_pred eeecCCCC-CceEeecCCceeeeehHHHHHHHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCC
Q psy8789 313 DCWDGPDG-TPIVYHGHTLTTKIKFKDVVKTIRDHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKN 391 (851)
Q Consensus 313 d~wdg~~~-~p~v~hg~t~t~~i~~~~v~~~i~~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~ 391 (851)
|||||++| +|||||||||||+|+|+|||+||++|||++|+||||||||||||++||.+||++|+++|||+||. |....
T Consensus 170 D~wdg~~~~~p~v~Hg~t~ts~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~-p~~~~ 248 (599)
T PLN02952 170 DLWPGSTKDEILVLHGRTLTTPVPLIKCLKSIRDYAFSSSPYPVIITLEDHLTPDLQAKVAEMATQIFGQMLYY-PESDS 248 (599)
T ss_pred EeecCCCCCCCEEEeCCccccCcCHHHHHHHHHHHhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcC-CCCcc
Confidence 99999876 58999999999999999999999999999999999999999999999999999999999999997 44445
Q ss_pred CCCCCChhhhhcccccccccCCC
Q psy8789 392 ETVLPSPHQLRGKILLKHKKLPE 414 (851)
Q Consensus 392 ~~~lpsp~~l~~kilik~k~~~~ 414 (851)
...||||++||||||||+|++.+
T Consensus 249 ~~~lpsP~~Lk~kilik~Kk~~~ 271 (599)
T PLN02952 249 LVQFPSPESLKHRIIISTKPPKE 271 (599)
T ss_pred cCCCCChHHhCCCEEEEecCCch
Confidence 67899999999999999999754
No 5
>PLN02228 Phosphoinositide phospholipase C
Probab=100.00 E-value=1.2e-72 Score=638.22 Aligned_cols=225 Identities=33% Similarity=0.565 Sum_probs=203.9
Q ss_pred ccccccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhCcCcchhhhhccccc
Q psy8789 186 SYSHYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFSKQNELWDQQYDAIH 265 (851)
Q Consensus 186 ~f~~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S~~n~~~~~~~~~~~ 265 (851)
.|..++.+ +.||.++|.+||+++|++...+.+.|+++|.+|++.... ...+.|++++|++||+|.+|+++ |.+..|+
T Consensus 29 if~~~s~~-~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~gF~~yl~s~~n~~~-~~~~~v~ 105 (567)
T PLN02228 29 LFEAYSRN-GKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVF-HHHGLVHLNAFYRYLFSDTNSPL-PMSGQVH 105 (567)
T ss_pred HHHHhcCC-CccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhh-cccCccCHHHHHHHhcCcccCCC-Ccccccc
Confidence 34445544 579999999999999999877788999999999864321 12367999999999999999988 5566799
Q ss_pred cCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCC-ceEeecCCceeeeehHHHHHHHh
Q psy8789 266 QDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGT-PIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 266 ~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~-p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++|+ ||||||+|+|++|+|+|||+||+
T Consensus 106 qdm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~p~v~Hg~t~ts~i~f~~v~~~I~ 185 (567)
T PLN02228 106 HDMKAPLSHYFVYTGHNSYLTGNQVNSRSSVEPIVQALRKGVKVIELDLWPNPSGNAAEVRHGRTLTSHEDLQKCLNAIK 185 (567)
T ss_pred ccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccCCCCCCCEEEeCCcccCceEHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998876 89999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhcccccccccCCC
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGKILLKHKKLPE 414 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~kilik~k~~~~ 414 (851)
+|||++|+||||||||||||++||.+||++|++||||+||..|. .....||||++||||||||+|+.++
T Consensus 186 ~~AF~~s~yPvIlslE~hc~~~qQ~~~a~~~~~~lg~~L~~~~~-~~~~~lpsP~~Lk~kilik~Kk~~~ 254 (567)
T PLN02228 186 DNAFQVSDYPVVITLEDHLPPNLQAQVAKMLTKTFRGMLFRCTS-ESTKHFPSPEELKNKILISTKPPKE 254 (567)
T ss_pred HhhccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhHhhcCCCC-CccCCCCChHHHCCCEEEEecCCcc
Confidence 99999999999999999999999999999999999999998654 4567899999999999999999765
No 6
>PLN02222 phosphoinositide phospholipase C 2
Probab=100.00 E-value=3.9e-72 Score=635.73 Aligned_cols=240 Identities=31% Similarity=0.523 Sum_probs=210.9
Q ss_pred HHHHHHHHHhhhccccccccccccccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHH
Q psy8789 166 FDEFSILYNRIMFDEQMFTDSYSHYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEF 245 (851)
Q Consensus 166 f~EF~~~~~~l~~r~~~~~~~f~~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF 245 (851)
|.-+..++..+..+ + ....|..+++ ++.||.++|.+||+++|++..++.++|++||++|.... ..+.|++++|
T Consensus 12 ~~~~~~~~~~~~~~-e-i~~if~~~~~-~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~----~~~~~~~~gF 84 (581)
T PLN02222 12 FRRRFRYTASEAPR-E-IKTIFEKYSE-NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLL----HRNGLHLDAF 84 (581)
T ss_pred eccccccccCCCcH-H-HHHHHHHhcC-CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhh----hccCcCHHHH
Confidence 34444455444322 2 2244545554 46899999999999999998888899999999985322 1367999999
Q ss_pred HHHHhCcCcchhhhhccccccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCc-eE
Q psy8789 246 IDFLFSKQNELWDQQYDAIHQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTP-IV 324 (851)
Q Consensus 246 ~~fL~S~~n~~~~~~~~~~~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p-~v 324 (851)
++||+|++|.++.+ ..|+|||++|||||||||||||||+|+||.|.||+|+|++||++||||||||||||++|+| +|
T Consensus 85 ~~yL~s~~n~~~~~--~~v~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~~~v 162 (581)
T PLN02222 85 FKYLFGDNNPPLAL--HEVHHDMDAPISHYFIFTGHNSYLTGNQLSSDCSEVPIIDALKKGVRVIELDIWPNSDKDDIDV 162 (581)
T ss_pred HHHhcCCCCCCCcc--ccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEEeccCCCCCCCeE
Confidence 99999999998853 5689999999999999999999999999999999999999999999999999999998875 69
Q ss_pred eecCCceeeeehHHHHHHHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhcc
Q psy8789 325 YHGHTLTTKIKFKDVVKTIRDHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGK 404 (851)
Q Consensus 325 ~hg~t~t~~i~~~~v~~~i~~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~k 404 (851)
|||+|||++|+|+|||+||++|||++|+||||||||||||++||.+||++|+++|||+||..|++.....||||++||||
T Consensus 163 ~HG~tlt~~i~f~~v~~~I~~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~~~~~~g~~L~~~~~~~~~~~lpsP~~Lk~k 242 (581)
T PLN02222 163 LHGMTLTTPVGLIKCLKAIRAHAFDVSDYPVVVTLEDHLTPDLQSKVAEMVTEIFGEILFTPPVGESLKEFPSPNSLKKR 242 (581)
T ss_pred eeCCcccCceeHHHHHHHHHHhcccCCCCCEEEEeecCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCCCChHHHCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998877667899999999999
Q ss_pred cccccccCCC
Q psy8789 405 ILLKHKKLPE 414 (851)
Q Consensus 405 ilik~k~~~~ 414 (851)
||||+|+.++
T Consensus 243 ilik~K~~~~ 252 (581)
T PLN02222 243 IIISTKPPKE 252 (581)
T ss_pred EEEEecCCcc
Confidence 9999999664
No 7
>PLN02223 phosphoinositide phospholipase C
Probab=100.00 E-value=3.7e-71 Score=615.92 Aligned_cols=228 Identities=24% Similarity=0.381 Sum_probs=203.6
Q ss_pred cccccccCCCCccCHHHHHHHH---HHhcCcCcCCHHHHHHHHHHhccccc---cccCCCcccHHHHHHHHhCcCcchhh
Q psy8789 185 DSYSHYSSDGQTVTASELTNFL---IREQNETNVNEREVSRHMRDYLQDEQ---RNVQEPYFTFMEFIDFLFSKQNELWD 258 (851)
Q Consensus 185 ~~f~~~~~~~~~lt~~ef~~FL---~~~Q~e~~~s~~~~~~li~~~d~d~~---~~~~~g~ls~deF~~fL~S~~n~~~~ 258 (851)
..|..|+.+.+.|+.+.|.+|| .++|++..++.++++.+|+.+..... +-...+.|++++|.+||+|+++..
T Consensus 20 ~~f~~~~~~~~~m~~~~l~~fl~~l~~~q~e~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l~~~~f~~~L~s~~~n~-- 97 (537)
T PLN02223 20 NFFGNEFHGYDDDMPELLPRFIELLDTEKDEDGAGLNAAEKIAAELKRRKCDILAFRNLRCLELDHLNEFLFSTELNP-- 97 (537)
T ss_pred HHHHHhhcCCCCCCHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHhhcccchhhhhccccCHHHHHHHhcCcccCC--
Confidence 4455677777889999999999 99999999999999999998753221 111236799999999999988443
Q ss_pred hhcccc-ccCcCCccccccccccCCccccCCccccC-CCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeeh
Q psy8789 259 QQYDAI-HQDMTKPLSHYFINSSHNTYLTGDQFSSE-SSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKF 336 (851)
Q Consensus 259 ~~~~~~-~~dm~~pl~~Y~i~sshntyl~~~q~~~~-ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~ 336 (851)
|.+..| +|||++|||||||||||||||+||||.|. ||+|+|++||++||||||||||||++++|+|+||+||||+|+|
T Consensus 98 ~~~~~v~~~DM~~PLshYfI~SSHNTYL~g~Ql~~~~ss~e~y~~aL~~GcRcvElD~W~~~~~~~~v~hG~tlts~i~f 177 (537)
T PLN02223 98 PIGDQVRHHDMHAPLSHYFIHTSLKSYFTGNNVFGKLYSIEPIIDALEQGVRVVELDLLPDGKDGICVRPKWNFEKPLEL 177 (537)
T ss_pred ccccccCcccCCCchhhheeeccccccccCCcccCCcccHHHHHHHHHcCCcEEEEEecCCCCCCCeEeeCCceecceEH
Confidence 444567 99999999999999999999999999999 9999999999999999999999988899999999999999999
Q ss_pred HHHHHHHhhcccccC-CCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhcccccccccCCC
Q psy8789 337 KDVVKTIRDHAFETS-KYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGKILLKHKKLPE 414 (851)
Q Consensus 337 ~~v~~~i~~~af~~s-~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~kilik~k~~~~ 414 (851)
+|||+||++|||++| +||||||||||||++||.+||++|++||||+||+.|.+.....||||++||||||||+|+..+
T Consensus 178 ~~vl~aI~~~AF~~s~~yPvIlslE~Hcs~~qQ~~~A~~l~~i~Gd~L~~~~~~~~~~~lPSP~~Lk~kIlik~K~~~~ 256 (537)
T PLN02223 178 QECLDAIKEHAFTKCRSYPLIITFKDGLKPDLQSKATQMIDQTFGDMVYHEDPQHSLEEFPSPAELQNKILISRRPPKE 256 (537)
T ss_pred HHHHHHHHHHhhhcCCCCceEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCCccccccCCChHHhCCCEEEEcCCCcc
Confidence 999999999999998 999999999999999999999999999999999977656668999999999999999998654
No 8
>PLN02230 phosphoinositide phospholipase C 4
Probab=100.00 E-value=9.5e-71 Score=624.90 Aligned_cols=227 Identities=34% Similarity=0.563 Sum_probs=202.1
Q ss_pred cccccccCCCCccCHHHHHHHHHHhcCcC-cCCHHHHHHHHHHhcccccc--ccCCCcccHHHHHHHHhCcCcchhhhhc
Q psy8789 185 DSYSHYSSDGQTVTASELTNFLIREQNET-NVNEREVSRHMRDYLQDEQR--NVQEPYFTFMEFIDFLFSKQNELWDQQY 261 (851)
Q Consensus 185 ~~f~~~~~~~~~lt~~ef~~FL~~~Q~e~-~~s~~~~~~li~~~d~d~~~--~~~~g~ls~deF~~fL~S~~n~~~~~~~ 261 (851)
..|..++.++++||+++|.+||+++|++. ..+.++|+.+|.++...... ....+.|++++|.+||+|.+ +++|.+
T Consensus 33 ~lf~~~s~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s~~--~~~~~~ 110 (598)
T PLN02230 33 DLFEKYADGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFSTD--LNPPIA 110 (598)
T ss_pred HHHHHHhCCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHcCcc--cCCccc
Confidence 44556666667999999999999999765 34668899999887643210 11235799999999999976 335677
Q ss_pred cccccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHH
Q psy8789 262 DAIHQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVK 341 (851)
Q Consensus 262 ~~~~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~ 341 (851)
..|+|||++|||||||||||||||+|+||.|.||+|+|++||++||||||||||||++|||+|+||+|||++|+|+|||+
T Consensus 111 ~~v~qDM~~PLshYfI~sSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~t~t~~i~f~~v~~ 190 (598)
T PLN02230 111 DQVHQNMDAPLSHYFIFTGHNSYLTGNQLSSNCSELPIADALRRGVRVVELDLWPRGTDDVCVKHGRTLTKEVKLGKCLD 190 (598)
T ss_pred ccccccCCCchhhheeecccCccccCCcccCccCHHHHHHHHHcCCcEEEEeccCCCCCCcEEeeCCCCcCCcCHHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhcccccccccCCC
Q psy8789 342 TIRDHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGKILLKHKKLPE 414 (851)
Q Consensus 342 ~i~~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~kilik~k~~~~ 414 (851)
||++|||++|+||||||||||||++||.+||++|+++|||+||..|.+ ....||||++||||||||+|++.+
T Consensus 191 ~I~~~aF~~s~yPvIlslE~hcs~~~Q~~~a~~~~~~~Gd~L~~~~~~-~~~~lpsP~~Lk~kilik~Kk~~~ 262 (598)
T PLN02230 191 SIKANAFAISKYPVIITLEDHLTPKLQFKVAKMITQTFGDMLYYHDSE-GCQEFPSPEELKEKILISTKPPKE 262 (598)
T ss_pred HHHHhccCCCCCCeEEEeccCCCHHHHHHHHHHHHHHHhhhhccCCCc-ccCCCCChHHHcCCEEEEecCCcc
Confidence 999999999999999999999999999999999999999999986643 457899999999999999999764
No 9
>cd08594 PI-PLCc_eta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding motif,
Probab=100.00 E-value=7e-71 Score=552.47 Aligned_cols=147 Identities=59% Similarity=1.019 Sum_probs=142.4
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++||||||||+|+||+|+|+|||+||+
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~Y~~aL~~GcRcvElD~wdg~~~ePvV~HG~tlts~i~f~dv~~aI~ 80 (227)
T cd08594 1 NQDMTQPLSHYFIASSHNTYLTGDQLLSQSRVDMYARVLQAGCRCVEVDCWDGPDGEPVVHHGYTLTSKILFRDVIETIN 80 (227)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCCcccCcCHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcC-CCCCCCCCChhhhhccccccccc
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPV-EKNETVLPSPHQLRGKILLKHKK 411 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~-~~~~~~lpsp~~l~~kilik~k~ 411 (851)
+|||++|+||||||||||||++||.+||++|+++|||+|++.|. ......||||++||||||||+|+
T Consensus 81 ~~AF~~s~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~K~ 148 (227)
T cd08594 81 KYAFIKNEYPVILSIENHCSVQQQKKMAQYLKEILGDKLDLSSVISGDSKQLPSPQSLKGKILIKGKK 148 (227)
T ss_pred HhhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHHhccCCCCccccCCCCCHHHHccCEeccCCc
Confidence 99999999999999999999999999999999999999998654 33568999999999999999998
No 10
>cd08629 PI-PLCc_delta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta1 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This subfamily corresponds to the catalytic domain
Probab=100.00 E-value=3e-70 Score=558.01 Aligned_cols=149 Identities=60% Similarity=1.021 Sum_probs=145.8
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++||||||||+|+|++|+|+|||+||+
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~eP~V~HG~tlts~i~f~~v~~~I~ 80 (258)
T cd08629 1 YQDMDQPLSHYLVSSSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTFTSKILFCDVLRAIR 80 (258)
T ss_pred CCCCCCchhhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCCCccCcCHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhcccccccccCC
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGKILLKHKKLP 413 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~kilik~k~~~ 413 (851)
+|||++|+||||||||||||++||.+||++|+++|||+|++.|++.....||||++||||||||+|+..
T Consensus 81 ~~AF~~S~yPvIlsLE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~~k 149 (258)
T cd08629 81 DYAFKASPYPVILSLENHCSLEQQRVMARHLRAILGPILLDQPLDGVTTSLPSPEQLKGKILLKGKKLK 149 (258)
T ss_pred HHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCccccccCCCCHHHHCCCEEEEecccc
Confidence 999999999999999999999999999999999999999998887777899999999999999999874
No 11
>cd08632 PI-PLCc_eta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=4.2e-70 Score=553.17 Aligned_cols=150 Identities=55% Similarity=0.980 Sum_probs=143.7
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++|||||+||+|||++|+|+|||+||+
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~~eP~V~HG~Tlts~i~f~dv~~aI~ 80 (253)
T cd08632 1 NQDMDQPLCNYFIASSHNTYLTGDQLLSQSKVDMYARVLQAGCRCVEVDCWDGPDGEPVVHHGYTLTSKITFRDVIETIN 80 (253)
T ss_pred CCcccchhhhhhhccCCCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCCCccCcCHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCc-CCCCCCCCCChhhhhcccccccccCCC
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHP-VEKNETVLPSPHQLRGKILLKHKKLPE 414 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~-~~~~~~~lpsp~~l~~kilik~k~~~~ 414 (851)
+|||++|+||||||||||||++||.+||++|+++|||+|+..+ .+.....||||++||||||||+|+..+
T Consensus 81 ~~AF~~S~yPvIlSlE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPSP~~Lk~KIlik~K~~~~ 151 (253)
T cd08632 81 KYAFVKNEFPVILSIENHCSIQQQKKIAQYLKEIFGDKLDLSSVLTGDPKQLPSPQLLKGKILVKGKKLCR 151 (253)
T ss_pred HHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcccCCCHHHhcCcEEEeccCCcH
Confidence 9999999999999999999999999999999999999998644 344567999999999999999999754
No 12
>cd08633 PI-PLCc_eta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-eta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-eta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-eta represents a class of neuron-speific PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal tail that terminates with a PDZ-binding m
Probab=100.00 E-value=5.5e-70 Score=553.71 Aligned_cols=150 Identities=60% Similarity=1.005 Sum_probs=143.6
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++|||||+||+|+|++|+|+|||+||+
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~Wdg~~~eP~V~HG~tlts~i~f~~v~~~I~ 80 (254)
T cd08633 1 NQDMTQPLSHYFITSSHNTYLSGDQLMSQSRVDMYAWVLQAGCRCVEVDCWDGPDGEPIVHHGYTLTSKILFKDVIETIN 80 (254)
T ss_pred CCCcCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCCcccCcCHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCC-CCCCCCCChhhhhcccccccccCCC
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVE-KNETVLPSPHQLRGKILLKHKKLPE 414 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~-~~~~~lpsp~~l~~kilik~k~~~~ 414 (851)
+|||++|+||||||||||||++||.+||++|+++|||+|+..|.. .....||||++||||||||+|+..+
T Consensus 81 ~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lPsP~~Lk~KIlik~Kk~~~ 151 (254)
T cd08633 81 KYAFIKNEYPVILSIENHCSVPQQKKMAQYLTEILGDKLDLSSVISNDCTRLPSPEILKGKILVKGKKLSR 151 (254)
T ss_pred HHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhcCCCCCcCccCCCCCHHHHccCeEEeeccCch
Confidence 999999999999999999999999999999999999999986542 3457899999999999999999654
No 13
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=6.4e-70 Score=545.15 Aligned_cols=150 Identities=71% Similarity=1.186 Sum_probs=146.5
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
.|||++|||||||||||||||+|+||.|+||+++|++||++||||||||||||+||||||+||+|+|++|+|+|||+||+
T Consensus 1 ~~DM~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcR~vElD~wdg~dgePvV~Hg~tlts~i~f~dv~~~I~ 80 (229)
T cd08627 1 PEEMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDGPDGMPVIYHGHTLTTKIKFSDVLHTIK 80 (229)
T ss_pred CccccchhhhheeecCcCccccCCccCCcccHHHHHHHHHhCCCEEEEEeecCCCCCEEEEeCCcCCCceEHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhcccccccccCCC
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGKILLKHKKLPE 414 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~kilik~k~~~~ 414 (851)
+|||++|+||||||||||||++||.+||++|+++|||+||+.|.+.....||||++||||||||+|+...
T Consensus 81 ~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lPSP~~Lk~KIlik~K~~~~ 150 (229)
T cd08627 81 EHAFVTSEYPIILSIEDHCSIVQQRNMAQHFKKVFGDMLLTKPVDINADGLPSPNQLKRKILIKHKKLYR 150 (229)
T ss_pred HhhccCCCCCEEEEEcccCCHHHHHHHHHHHHHHHhhhhcCCCcccCCCcCCChHHhCcCEEEecccccc
Confidence 9999999999999999999999999999999999999999999877778999999999999999999875
No 14
>cd08595 PI-PLCc_zeta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-zeta. This family corresponds to the catalytic domain presenting in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-zeta isozyme. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-zeta represents a class of sperm-specific PI-PLC that has an N-terminal EF-hand domain, a PLC catalytic core domain, and a C-terminal C2 domain. The PLC catalytic core domain is a TIM barrel with two highly conserved regions (X and Y)
Probab=100.00 E-value=1.1e-69 Score=554.61 Aligned_cols=148 Identities=53% Similarity=0.950 Sum_probs=143.9
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++|||||+||+|||++|+|+|||+|||
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~tlt~~i~f~~v~~~I~ 80 (257)
T cd08595 1 YQDMDHPLSDYFISSSHNTYLVSDQLVGPSDLDGYVSALRKGCRCLEIDCWDGADNEPVVYHGYTLTSKILFKEVITTVE 80 (257)
T ss_pred CCCCCCchhhheeeccccccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCcEEecCCCcccccCHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCC-CCCCCChhhhhcccccccccC
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKN-ETVLPSPHQLRGKILLKHKKL 412 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~-~~~lpsp~~l~~kilik~k~~ 412 (851)
+|||++|+||||||||||||++||.+||++|+++|||+|+..|++.. ...||||++||||||||+|+.
T Consensus 81 ~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~lgd~L~~~~~~~~~~~~lpsP~~Lk~KIlik~K~k 149 (257)
T cd08595 81 KYAFEKSDYPVVLSLENHCSTEQQEIMAHYLVSILGEKLLRAPIDDPATGELPSPEALKFKILVKNKKK 149 (257)
T ss_pred HHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHhhcCCCCCcCCcCcCCCHHHHcCCEEEEeccc
Confidence 99999999999999999999999999999999999999999887654 379999999999999999983
No 15
>cd08631 PI-PLCc_delta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta4 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which
Probab=100.00 E-value=1.3e-69 Score=554.52 Aligned_cols=148 Identities=58% Similarity=1.010 Sum_probs=144.2
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++|||||+||+|+|++|+|+|||+|||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~eP~V~HG~tlts~i~f~~v~~~Ik 80 (258)
T cd08631 1 YQDMTQPLCHYFICSSHNTYLMEDQLRGQSSVEGYIRALKRGCRCVEVDVWDGPNGEPIVYHGHTFTSKILFKDVVAAVA 80 (258)
T ss_pred CCcCCcchhhheeecCCCccccCCcccCccCHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCcccCCcCHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCC-CCCCCCChhhhhcccccccccC
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEK-NETVLPSPHQLRGKILLKHKKL 412 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~-~~~~lpsp~~l~~kilik~k~~ 412 (851)
+|||++|+||||||||||||++||.+||++|+++|||+|++.|++. ....||||++||||||||+|+.
T Consensus 81 ~~AF~~s~yPvIlslE~Hc~~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~Kk~ 149 (258)
T cd08631 81 QYAFQVSDYPVILSLENHCGVEQQQTMAQHLTEILGEKLLSTTLDGVLPTQLPSPEELRGKILLKGKKI 149 (258)
T ss_pred HHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCCcccCCCCCCCHHHHhcceEeeeccc
Confidence 9999999999999999999999999999999999999999988764 3589999999999999999986
No 16
>cd08596 PI-PLCc_epsilon Catalytic domain of metazoan phosphoinositide-specific phospholipase C-epsilon. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-epsilon isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-epsilon represents a class of mammalian PI-PLC that has an N-terminal CDC25 homology domain with a guanyl-nucleotide exchange factor (GFF) activity, a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core
Probab=100.00 E-value=1.4e-69 Score=553.07 Aligned_cols=150 Identities=61% Similarity=1.008 Sum_probs=143.4
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
.|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++||||||||+|+||+|+|+|||+||+
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdG~~~eP~V~HG~tlts~i~f~dv~~~I~ 80 (254)
T cd08596 1 EEDLQYPLSYYYIESSHNTYLTGHQLKGESSVELYSQVLLTGCRCVELDCWDGDDGMPIIYHGHTLTTKIPFKDVVEAIN 80 (254)
T ss_pred CCccccchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCCcccCcCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCC----CCCCCCChhhhhcccccccccCCC
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEK----NETVLPSPHQLRGKILLKHKKLPE 414 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~----~~~~lpsp~~l~~kilik~k~~~~ 414 (851)
+|||++|+||||||||||||.+||.+||++|+++|||+||+.|+.. ....||||++||||||||+|+.++
T Consensus 81 ~~AF~~S~yPvIlslE~Hcs~~qQ~~ma~~l~~~~Gd~L~~~~l~~~~~~~~~~lPsP~~Lk~KIlik~K~~~e 154 (254)
T cd08596 81 RSAFITSDYPVILSIENHCSLQQQRKMAEIFKTVFGEKLVTKFLFESDFSDDPSLPSPLQLKNKILLKNKKAPE 154 (254)
T ss_pred HHhccCCCCCEEEEecccCCHHHHHHHHHHHHHHHhHhhccCCcccccccccCCCCCHHHHhhcceecccCcHH
Confidence 9999999999999999999999999999999999999999987532 246899999999999999999543
No 17
>cd08626 PI-PLCc_beta4 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta4. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 4. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=1.3e-69 Score=554.04 Aligned_cols=149 Identities=58% Similarity=1.001 Sum_probs=143.6
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCC--CCCceEeecCCceeeeehHHHHHH
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGP--DGTPIVYHGHTLTTKIKFKDVVKT 342 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~--~~~p~v~hg~t~t~~i~~~~v~~~ 342 (851)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||+ +||||||||+|+|++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~~~eP~V~HG~tlts~i~f~dv~~a 80 (257)
T cd08626 1 YQDMDQPLAHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLAGCRCIELDCWDGKGEDQEPIITHGKAMCTDILFKDVIQA 80 (257)
T ss_pred CCcccchhhhheeecCcCccccCCcccCCccHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCCccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999997 899999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCC----CCCCCChhhhhcccccccccCC
Q psy8789 343 IRDHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKN----ETVLPSPHQLRGKILLKHKKLP 413 (851)
Q Consensus 343 i~~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~----~~~lpsp~~l~~kilik~k~~~ 413 (851)
|++|||++|+||||||||||||++||.+||++|+++|||+||..|++.. ...||||++||||||||+|++.
T Consensus 81 I~~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~KIlik~K~Ls 155 (257)
T cd08626 81 IKDTAFVTSDYPVILSFENHCSKPQQYKLAKYCEEIFGDLLLTKPLESHPLEPGVPLPSPNKLKRKILIKNKRLS 155 (257)
T ss_pred HHHHhcccCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHhhcCCCccccccccCCCCCCHHHHhcCeeecccchh
Confidence 9999999999999999999999999999999999999999999887642 4689999999999999999954
No 18
>cd08624 PI-PLCc_beta2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 2. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=2.3e-69 Score=553.50 Aligned_cols=150 Identities=60% Similarity=0.958 Sum_probs=143.9
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCC--CCCceEeecCCceeeeehHHHHHH
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGP--DGTPIVYHGHTLTTKIKFKDVVKT 342 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~--~~~p~v~hg~t~t~~i~~~~v~~~ 342 (851)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||+ +||||||||+|+|++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~ePvV~HG~tlts~i~f~dv~~~ 80 (261)
T cd08624 1 HQDMTQPLNHYFINSSHNTYLTAGQFSGLSSPEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMTTEILFKDAIEA 80 (261)
T ss_pred CCCCCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCcEEEEEecCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 699999999999999999999999999999999999999999999999999994 799999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhcccCCCcCCC----CCCCCCChhhhhcccccccccCCC
Q psy8789 343 IRDHAFETSKYPVILSIEDNC-SLPQQRVMAQIMLDIFKDMLLIHPVEK----NETVLPSPHQLRGKILLKHKKLPE 414 (851)
Q Consensus 343 i~~~af~~s~yP~ils~e~hc-~~~~q~~~a~~~~~~~g~~l~~~~~~~----~~~~lpsp~~l~~kilik~k~~~~ 414 (851)
|++|||++|+||||||||||| |++||++||++|+++|||+|++.|++. ....||||++||||||||+|+.++
T Consensus 81 I~~~AF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lPsP~~Lk~Kilik~K~~~e 157 (261)
T cd08624 81 IAESAFKTSPYPVILSFENHVDSPKQQAKMAEYCRTIFGDMLLTEPLEKYPLKPGVPLPSPEDLRGKILIKNKKYEE 157 (261)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhcCCCccccccCcCCcCCCHHHHhccEEEeeccccc
Confidence 999999999999999999999 799999999999999999999988764 247999999999999999999654
No 19
>cd08630 PI-PLCc_delta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta3 isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This family corresponds to the catalytic domain wh
Probab=100.00 E-value=3.5e-69 Score=552.31 Aligned_cols=149 Identities=58% Similarity=1.080 Sum_probs=144.7
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++||||||||+|+|++|+|+|||+||+
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~eP~V~HG~tlts~i~f~~v~~~I~ 80 (258)
T cd08630 1 FQDMSQPLAHYFISSSHNTYLTDSQIGGPSSTEAYVRAFAQGCRCVELDCWEGPGGEPVIYHGHTLTSKILFRDVIQAVR 80 (258)
T ss_pred CCccccchhhheeecccCccccCCcccCcccHHHHHHHHHcCCcEEEEEeecCCCCCcEEeeCCccccceEHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCC-CCCCCCChhhhhcccccccccCC
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEK-NETVLPSPHQLRGKILLKHKKLP 413 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~-~~~~lpsp~~l~~kilik~k~~~ 413 (851)
+|||++|+||||||||||||++||.+||++|+++|||+||..|++. ....||||++||||||||+|+..
T Consensus 81 ~~AF~~s~yPvIlslE~Hcs~~qQ~~~a~~l~~~~Gd~L~~~~~~~~~~~~lpSP~~Lk~KIlik~kk~~ 150 (258)
T cd08630 81 QHAFTASPYPVILSLENHCGLEQQAAMARHLQTILGDMLVTQPLDSLNPEELPSPEELKGRVLVKGKKLQ 150 (258)
T ss_pred HHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHhhhhcCCCCCcCCcCCCCCHHHHccCEEeeccCcc
Confidence 9999999999999999999999999999999999999999988765 35789999999999999999874
No 20
>cd08591 PI-PLCc_beta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for homod
Probab=100.00 E-value=4.5e-69 Score=550.12 Aligned_cols=150 Identities=59% Similarity=0.980 Sum_probs=144.1
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCC--CCceEeecCCceeeeehHHHHHH
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPD--GTPIVYHGHTLTTKIKFKDVVKT 342 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~--~~p~v~hg~t~t~~i~~~~v~~~ 342 (851)
||||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++ ||||||||+|+|++|+|+|||+|
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~eP~V~HG~tlts~i~f~~v~~a 80 (257)
T cd08591 1 YQDMDQPLSHYFINSSHNTYLTGRQFGGKSSVEMYRQVLLSGCRCIELDCWDGKGEDEEPIITHGKTMCTEILFKDVIEA 80 (257)
T ss_pred CCccCcchhhheeecccCccccCCcccCcccHHHHHHHHHhCCcEEEEEeecCCCCCCCCEEeeCCCCccCeEHHHHHHH
Confidence 6999999999999999999999999999999999999999999999999999986 99999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCC----CCCCCChhhhhcccccccccCCC
Q psy8789 343 IRDHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKN----ETVLPSPHQLRGKILLKHKKLPE 414 (851)
Q Consensus 343 i~~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~----~~~lpsp~~l~~kilik~k~~~~ 414 (851)
|++|||++|+||||||||||||++||.+||++|+++|||+|+..|++.. ...||||++||||||||+|++..
T Consensus 81 Ik~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~~~~~~~~~~~~~lPSP~~Lk~KIlik~K~ls~ 156 (257)
T cd08591 81 IAETAFKTSEYPVILSFENHCSSKQQAKMAEYCREIFGDLLLTEPLEKYPLEPGVPLPSPNDLKRKILIKNKKLSS 156 (257)
T ss_pred HHHHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCCCCHHHHhcceeeecccchh
Confidence 9999999999999999999999999999999999999999999887642 46899999999999999999553
No 21
>cd08558 PI-PLCc_eukaryota Catalytic domain of eukaryotic phosphoinositide-specific phospholipase C and similar proteins. This family corresponds to the catalytic domain present in eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) and similar proteins. The higher eukaryotic PI-PLCs play a critical role in most signal transduction pathways, controlling numerous cellular events such as cell growth, proliferation, excitation and secretion. They strictly require Ca2+ for the catalytic activity. They display a clear preference towards the hydrolysis of the more highly phosphorylated membrane phospholipids PI-analogues, phosphatidylinositol 4,5-bisphosphate (PIP2) and phosphatidylinositol-4-phosphate (PIP), to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein ki
Probab=100.00 E-value=4.8e-69 Score=541.95 Aligned_cols=147 Identities=68% Similarity=1.161 Sum_probs=144.8
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++||||||||+|+|++|+|+|||+|||
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~~~Ss~~~y~~aL~~GcRcvElD~wdg~~~eP~v~HG~t~ts~i~f~dv~~~Ik 80 (226)
T cd08558 1 YQDMTQPLSHYFISSSHNTYLTGDQLTGESSVEAYIRALLRGCRCVELDCWDGPDGEPVVYHGHTLTSKILFKDVIEAIK 80 (226)
T ss_pred CCcCCccHHHhhhcccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCCCCeEEeeCCCCccceEHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhccccccccc
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGKILLKHKK 411 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~kilik~k~ 411 (851)
+|||++|+||||||||||||.+||.+||++|+++|||+||+.|.+.....||||++||||||||+|+
T Consensus 81 ~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~lPSP~~Lk~KIlik~K~ 147 (226)
T cd08558 81 EYAFVTSPYPVILSLENHCSLEQQKKMAQILKEIFGDKLLTPPLDENPVQLPSPEQLKGKILIKGKK 147 (226)
T ss_pred HHhcccCCCCeEEEEecCCCHHHHHHHHHHHHHHHhhhhcCCCCcccCCCCCChHHhCCCEEEEccC
Confidence 9999999999999999999999999999999999999999998887778999999999999999999
No 22
>cd08623 PI-PLCc_beta1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=5.5e-69 Score=549.81 Aligned_cols=149 Identities=52% Similarity=0.890 Sum_probs=142.8
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCC--CCCceEeecCCceeeeehHHHHHH
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGP--DGTPIVYHGHTLTTKIKFKDVVKT 342 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~--~~~p~v~hg~t~t~~i~~~~v~~~ 342 (851)
.|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||+ +||||||||+|+|++|+|+|||+|
T Consensus 1 ~~Dm~~PLs~YfI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~wdG~~~~~ePiV~HG~tlts~i~f~dv~~~ 80 (258)
T cd08623 1 NEDMSQPLSHYFINSSHNTYLTAGQLAGNSSVEMYRQVLLSGCRCVELDCWKGRTAEEEPVITHGFTMTTEISFKEVIEA 80 (258)
T ss_pred CCCcCCchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEeeCCCCCCCCCEEeeCCCcccCcCHHHHHHH
Confidence 389999999999999999999999999999999999999999999999999998 689999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhcccCCCcCCC----CCCCCCChhhhhcccccccccCC
Q psy8789 343 IRDHAFETSKYPVILSIEDNC-SLPQQRVMAQIMLDIFKDMLLIHPVEK----NETVLPSPHQLRGKILLKHKKLP 413 (851)
Q Consensus 343 i~~~af~~s~yP~ils~e~hc-~~~~q~~~a~~~~~~~g~~l~~~~~~~----~~~~lpsp~~l~~kilik~k~~~ 413 (851)
|++|||++|+||||||||||| +++||.+||++|+++|||+||+.|++. ....||||++||||||||+|++.
T Consensus 81 I~~~AF~~S~yPvIlSlE~Hc~s~~qQ~~ma~~l~~~lGd~L~~~~~~~~~~~~~~~lpSP~~Lk~KIlik~KkLs 156 (258)
T cd08623 81 IAECAFKTSPFPILLSFENHVDSPKQQAKMAEYCRLIFGDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKMS 156 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHhhhhccCCccccccccCCcCCCHHHHhhhhheeccchh
Confidence 999999999999999999999 599999999999999999999988763 34799999999999999999964
No 23
>cd08593 PI-PLCc_delta Catalytic domain of metazoan phosphoinositide-specific phospholipase C-delta. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-delta isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-delta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C-terminal C2 domain. This CD corresponds to the catalytic domain which is
Probab=100.00 E-value=6e-69 Score=552.34 Aligned_cols=149 Identities=64% Similarity=1.094 Sum_probs=145.7
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
+|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++|||||+||+|+|++|+|+|||+||+
T Consensus 1 ~qDm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~eP~v~HG~t~t~~i~f~~v~~~I~ 80 (257)
T cd08593 1 YQDMTQPLSHYFIASSHNTYLLEDQLKGPSSTEAYIRALKKGCRCVELDCWDGPDGEPIIYHGHTLTSKILFKDVIQAIR 80 (257)
T ss_pred CCcCCcchhhheeecccCccccCCcccCCccHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCccccCcCHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhcccccccccCC
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGKILLKHKKLP 413 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~kilik~k~~~ 413 (851)
+|||++|+||||||||||||++||.+||++|+++|||+|+..|++.....||||++||||||||+|+..
T Consensus 81 ~~aF~~s~yPvIlslE~Hcs~~qQ~~~a~~~~~~~g~~L~~~p~~~~~~~lpsP~~Lk~Kilik~k~~~ 149 (257)
T cd08593 81 EYAFKVSPYPVILSLENHCSVEQQKVMAQHLKSILGDKLLTQPLDGVLTALPSPEELKGKILVKGKKLK 149 (257)
T ss_pred HHhccCCCCCEEEEeeccCCHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCHHHHCCCEEEEecccc
Confidence 999999999999999999999999999999999999999998887777899999999999999999873
No 24
>cd08598 PI-PLC1c_yeast Catalytic domain of putative yeast phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of putative phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) encoded by PLC1 genes from yeasts, which are homologs of the delta isoforms of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The prototype of this CD is protein Plc1p encoded by PLC1 genes fro
Probab=100.00 E-value=1.1e-68 Score=541.04 Aligned_cols=147 Identities=52% Similarity=0.970 Sum_probs=144.2
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
.|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++||||||||+|+|++|+|+|||+|||
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~wdg~~~ep~V~HG~t~ts~i~f~dv~~~Ik 80 (231)
T cd08598 1 EEDLSRPLNEYFISSSHNTYLLGRQLAGDSSVEGYIRALQRGCRCVEIDVWDGDDGEPVVTHGYTLTSSVPFRDVCRAIK 80 (231)
T ss_pred CCccccchHhheeeccccccccCCccCCccCHHHHHHHHHhCCcEEEEEeecCCCCCcEEeeCCCCcCceEHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhccccccccc
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGKILLKHKK 411 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~kilik~k~ 411 (851)
+|||++|+||||||||||||.+||.+||++|+++|||+||+.|++.....||||++||||||||+|+
T Consensus 81 ~~aF~~s~yPvILslE~Hcs~~qQ~~ma~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~KIlik~K~ 147 (231)
T cd08598 81 KYAFVTSPYPLILSLEVHCDAEQQERMVEIMKETFGDLLVTEPLDGLEDELPSPEELRGKILIKVKK 147 (231)
T ss_pred HHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCcccccCCCCCHHHHCCCEEEEecc
Confidence 9999999999999999999999999999999999999999999877678999999999999999998
No 25
>cd08628 PI-PLCc_gamma2 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma2. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 2. PI-PLC is a signaling enzyme that hydrolyze the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=100.00 E-value=2.2e-68 Score=545.20 Aligned_cols=150 Identities=68% Similarity=1.167 Sum_probs=146.2
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
.|||++|||||||||||||||+|+||.|+||+|+|++||++||||||||||||++||||||||+|+|++|+|+|||+||+
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~~eP~V~HG~t~ts~i~f~dv~~~I~ 80 (254)
T cd08628 1 PQDMNNPLSHYWISSSHNTYLTGDQLRSESSTEAYIRCLRMGCRCIELDCWDGPDGKPIIYHGWTRTTKIKFDDVVQAIK 80 (254)
T ss_pred CCcccchHHhhheecCcCCcccCCeeecCCCHHHHHHHHHcCCcEEEEEeecCCCCCeEEeeCCCccCCcCHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhcccccccccCCC
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGKILLKHKKLPE 414 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~kilik~k~~~~ 414 (851)
+|||++|+||||||||||||++||.+||++|+++|||+||..|++.....||||++||||||||+|++..
T Consensus 81 ~~AF~~s~yPvIlslE~Hcs~~qQ~~ma~~l~~~lGd~L~~~p~~~~~~~lpsp~~Lk~Kilik~k~~~~ 150 (254)
T cd08628 81 DHAFVTSEYPVILSIEEHCSVEQQRHMAKVFKEVFGDKLLMKPLEASADQLPSPTQLKEKIIIKHKKLIA 150 (254)
T ss_pred HHhccCCCCCEEEEEeccCCHHHHHHHHHHHHHHHhHHhcCCCCccccccCCCHHHHcCCeEeeccCcCC
Confidence 9999999999999999999999999999999999999999989887788999999999999999999753
No 26
>cd08625 PI-PLCc_beta3 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta3. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-beta isozyme 3. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PLC-beta represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, a C2 domain, and a unique C-terminal coiled-coil (CT) domain necessary for ho
Probab=100.00 E-value=9.7e-68 Score=544.70 Aligned_cols=149 Identities=56% Similarity=0.929 Sum_probs=142.9
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCC--CCCceEeecCCceeeeehHHHHHH
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGP--DGTPIVYHGHTLTTKIKFKDVVKT 342 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~--~~~p~v~hg~t~t~~i~~~~v~~~ 342 (851)
.|||++|||||||||||||||+|+||.|+||+|||++||++||||||||||||+ +||||||||||+|++|+|+|||+|
T Consensus 1 ~~Dm~~Pls~YfI~SSHNTYL~g~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~~~eP~v~Hg~t~t~~i~f~dv~~~ 80 (258)
T cd08625 1 SDDMNQPLSHYFINSSHNTYLTAGQLTGLSSVEMYRQVLLTGCRCIELDCWKGRPPEEEPFITHGFTMTTEIPFKDVIEA 80 (258)
T ss_pred CCccCcchhhheeecCccccccCCccCCccCHHHHHHHHHcCCCEEEEEecCCCCCCCCCEEeeCCccccCcCHHHHHHH
Confidence 389999999999999999999999999999999999999999999999999994 699999999999999999999999
Q ss_pred HhhcccccCCCceEEEeccCC-CHHHHHHHHHHHHHHhhcccCCCcCCC----CCCCCCChhhhhcccccccccCC
Q psy8789 343 IRDHAFETSKYPVILSIEDNC-SLPQQRVMAQIMLDIFKDMLLIHPVEK----NETVLPSPHQLRGKILLKHKKLP 413 (851)
Q Consensus 343 i~~~af~~s~yP~ils~e~hc-~~~~q~~~a~~~~~~~g~~l~~~~~~~----~~~~lpsp~~l~~kilik~k~~~ 413 (851)
|++|||++|+||||||||||| |++||.+||++|++||||+|++.|.+. ....||||++||+|||||+|++.
T Consensus 81 I~~~aF~~s~yPvIlslE~Hc~s~~qQ~~ma~~l~~ilGd~L~~~~~d~~~~~~~~~lpsP~~Lk~KILIK~KklS 156 (258)
T cd08625 81 IAESAFKTSPYPVILSFENHVDSAKQQAKMAEYCRSIFGDALLIDPLDKYPLVPGVQLPSPQELMGKILVKNKKMS 156 (258)
T ss_pred HHHHhccCCCCCEEEEehhcCCCHHHHHHHHHHHHHHHHHHhcCCcccccccccccCCCCHHHHhhceeeeeeecc
Confidence 999999999999999999999 799999999999999999999988763 34799999999999999999975
No 27
>cd08592 PI-PLCc_gamma Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma. This family corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozymes. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain.The PLC catalytic core domain is a TIM barrel with two highl
Probab=100.00 E-value=3.2e-67 Score=528.80 Aligned_cols=148 Identities=74% Similarity=1.244 Sum_probs=145.4
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
+|||++|||||||||||||||+|+||.|+||+++|++||++||||||||||||++|||||+||+|+|++|+|+|||+||+
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~ess~eay~~AL~~GcR~vElDvwdg~dgePvV~HG~tlts~i~f~dv~~~I~ 80 (229)
T cd08592 1 PQDMNNPLSHYWIASSHNTYLTGDQLSSESSLEAYARCLRMGCRCIELDCWDGPDGMPIIYHGHTLTSKIKFMDVLKTIK 80 (229)
T ss_pred CCcccchhHhheeeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCCCCEEEEeCCcCCCCcCHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhcccccccccC
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGKILLKHKKL 412 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~kilik~k~~ 412 (851)
+|||++|+||||||||||||.+||.+||++|+++|||+||+.|++.....||||++||||||||+|+.
T Consensus 81 ~~aF~~s~yPvIlslE~Hcs~~qQ~~ma~il~~~lGd~L~~~p~~~~~~~lpsP~~Lk~KILik~K~~ 148 (229)
T cd08592 81 EHAFVTSEYPVILSIENHCSLPQQRNMAQAFKEVFGDMLLTQPVDRNADQLPSPNQLKRKIIIKHKKL 148 (229)
T ss_pred HHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhHHhcCCCCccCCCcCCCHHHHCCCEEEEecCC
Confidence 99999999999999999999999999999999999999999998877789999999999999999987
No 28
>cd08599 PI-PLCc_plant Catalytic domain of plant phosphatidylinositide-specific phospholipases C. This family corresponds to the catalytic domain present in a group of phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11) encoded by PLC genes from higher plants, which are homologs of mammalian PI-PLC in terms of overall sequence similarity and domain organization. Mammalian PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which then phosphorylates other molecules, leading to altered cellular activity. Calcium is required for the catalysis. The domain arrangement of plant PI-PLCs is structurally similar to the mammalian PLC-zeta isoform, whi
Probab=100.00 E-value=2.4e-66 Score=523.98 Aligned_cols=148 Identities=48% Similarity=0.775 Sum_probs=143.7
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
+|||++|||||||+|||||||+|+||.|+||+++|++||++||||||||||||++|||+|+||+|+||+|+|+|||++|+
T Consensus 1 ~qDm~~PLs~YfI~sSHNTYL~g~Ql~~~ss~~~y~~aL~~GcRcvElD~Wdg~~~ep~V~HG~t~ts~i~f~dvl~~I~ 80 (228)
T cd08599 1 HHDMTAPLSHYFIFSSHNSYLTGNQLSSRSSTAPIIEALLRGCRVIELDLWPGGRGDICVLHGGTLTKPVKFEDCIKAIK 80 (228)
T ss_pred CCcCCcchhhhEEeccccccccCCccCCccCHHHHHHHHHhCCCEEEEEeecCCCCCeEEEeCCCCcCCcCHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhcccccccccC
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGKILLKHKKL 412 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~kilik~k~~ 412 (851)
+|||++|+||||||||||||.+||.+||++|+++|||+||..|.+.....||||++||||||||+|+.
T Consensus 81 ~~aF~~s~yPvILslE~hcs~~qQ~~~a~~l~~~lGd~L~~~~~~~~~~~lPsp~~Lk~Kilik~k~~ 148 (228)
T cd08599 81 ENAFTASEYPVIITLENHLSPELQAKAAQILRETLGDKLFYPDSEDLPEEFPSPEELKGKILISDKPP 148 (228)
T ss_pred HHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHhhhhccCCCcccccCCCCHHHhCCCEEEEecCC
Confidence 99999999999999999999999999999999999999999766655589999999999999999985
No 29
>cd08597 PI-PLCc_PRIP_metazoa Catalytic domain of metazoan phospholipase C related, but catalytically inactive protein. This family corresponds to the catalytic domain present in metazoan phospholipase C related, but catalytically inactive proteins (PRIP), which belong to a group of novel Inositol 1,4,5-trisphosphate (InsP3) binding protein. PRIP has a primary structure and domain architecture, incorporating a pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain with highly conserved X- and Y-regions split by a linker sequence, and a C-terminal C2 domain, similar to phosphoinositide-specific phospholipases C (PI-PLC, EC 3.1.4.11)-delta isoforms. Due to replacement of critical catalytic residues, PRIP do not have PLC enzymatic activity. PRIP consists of two subfamilies, PRIP-1(previously known as p130 or PLC-1), which is predominantly expressed in the brain, and PRIP-2 (previously known as PLC-2), which exhibits a relatively ubiquitous expression. Experiment
Probab=100.00 E-value=1.6e-65 Score=527.80 Aligned_cols=149 Identities=60% Similarity=1.066 Sum_probs=145.6
Q ss_pred ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
+|||++|||||||||||||||+|+||.|+||+++|++||++||||||||||||++|||||+||+|+|++|+|+|||+||+
T Consensus 1 ~qDm~~PLs~YfI~SSHNTYL~g~Ql~~~ss~~~y~~aL~~GcR~vElD~w~g~~gepvV~Hg~tlts~i~f~dv~~~I~ 80 (260)
T cd08597 1 CQDMTQPLSHYFIASSHNTYLIEDQLRGPSSVEGYVRALQRGCRCVELDCWDGPNGEPVIYHGHTLTSKISFRSVIEAIN 80 (260)
T ss_pred CCcccchHHhhhhccccCccccCCeecCccCHHHHHHHHHhCCCEEEEEeEcCCCCCEEEEeCCccccceEHHHHHHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhcccccccccCC
Q psy8789 345 DHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGKILLKHKKLP 413 (851)
Q Consensus 345 ~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~kilik~k~~~ 413 (851)
+|||++|+||||||||||||.+||.+||++|+++|||+||..|++.....||||++||||||||+|+..
T Consensus 81 ~~aF~~s~yPvIlslE~Hc~~~qQ~~~a~~l~~~lG~~L~~~~~~~~~~~lpsP~~Lk~Kilik~k~~~ 149 (260)
T cd08597 81 EYAFVASEYPLILCIENHCSEKQQLVMAQYLKEIFGDKLYTEPPNEGESYLPSPHDLKGKIIIKGKKLK 149 (260)
T ss_pred HHhccCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCHHHHCCCEEEEecCCC
Confidence 999999999999999999999999999999999999999998887777899999999999999999864
No 30
>cd00137 PI-PLCc Catalytic domain of prokaryotic and eukaryotic phosphoinositide-specific phospholipase C. This subfamily corresponds to the catalytic domain present in prokaryotic and eukaryotic phosphoinositide-specific phospholipase C (PI-PLC), which is a ubiquitous enzyme catalyzing the cleavage of the sn3-phosphodiester bond in the membrane phosphoinositides (phosphatidylinositol, PI; Phosphatidylinositol-4-phosphate, PIP; phosphatidylinositol 4,5-bisphosphate, PIP2) to yield inositol phosphates (inositol monosphosphate, InsP; inositol diphosphate, InsP2; inositol trisphosphate, InsP3) and diacylglycerol (DAG). The higher eukaryotic PI-PLCs (EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. They play a critical role in most signal transduction pathways, controlling numerous cellular events, such as cell growth, proliferation, excitation and secretion. These PI-PLCs strictly require Ca2+ for their catalytic a
Probab=100.00 E-value=4.7e-41 Score=358.18 Aligned_cols=149 Identities=40% Similarity=0.680 Sum_probs=141.5
Q ss_pred ccCcCCccccccccccCCccccCCccc-----cCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHH
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQFS-----SESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDV 339 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~~-----~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v 339 (851)
++||++||+||||++|||||++++|+. |+++.++|+++|++||||+|||||+|++++|+|+||+|+| +++|+||
T Consensus 1 ~~d~~~pLs~~~IpgSHnS~~~~~~~~~~~~~~~tq~~~~~~qL~~G~R~lDir~~~~~~~~~~v~HG~~~~-~~~f~dv 79 (274)
T cd00137 1 HHPDTQPLAHYSIPGTHDTYLTAGQFTIKQVWGLTQTEMYRQQLLSGCRCVDIRCWDGKPEEPIIYHGPTFL-DIFLKEV 79 (274)
T ss_pred CCCCCcCHHHeEEcCchHhhhcCCCCccccccCcCcHHHHHHHHHcCCcEEEEEeecCCCCCeEEEECCccc-CcCHHHH
Confidence 589999999999999999999999998 9999999999999999999999999999999999999999 9999999
Q ss_pred HHHHhhcccccCCCceEEEeccCCCH--HHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhhcccccccccCCCC
Q psy8789 340 VKTIRDHAFETSKYPVILSIEDNCSL--PQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLRGKILLKHKKLPEG 415 (851)
Q Consensus 340 ~~~i~~~af~~s~yP~ils~e~hc~~--~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~~kilik~k~~~~~ 415 (851)
|++|+++||+.++||||||||+||+. +||.+||++|+++||++|++.+ ......+|||++|||||||++|+....
T Consensus 80 l~~i~~fl~~~p~e~vIlsl~~~~~~~~~~q~~~~~~~~~~~g~~l~~~~-~~~~~~~Psl~~lrgKIll~~r~~~~~ 156 (274)
T cd00137 80 IEAIAQFLKKNPPETIIMSLKNEVDSMDSFQAKMAEYCRTIFGDMLLTPP-LKPTVPLPSLEDLRGKILLLNKKNGFS 156 (274)
T ss_pred HHHHHHHHHHCCCCeEEEEEEecCCCcHHHHHHHHHHHHHhhhhhhccCc-cccCCCCCCHHHHhhheeEEeeccCCC
Confidence 99999999999999999999999998 9999999999999999999844 344578999999999999999997653
No 31
>smart00148 PLCXc Phospholipase C, catalytic domain (part); domain X. Phosphoinositide-specific phospholipases C. These enzymes contain 2 regions (X and Y) which together form a TIM barrel-like structure containing the active site residues. Phospholipase C enzymes (PI-PLC) act as signal transducers that generate two second messengers, inositol-1,4,5-trisphosphate and diacylglycerol. The bacterial enzyme [6] appears to be a homologue of the mammalian PLCs.
Probab=100.00 E-value=2.2e-39 Score=308.60 Aligned_cols=135 Identities=61% Similarity=1.081 Sum_probs=130.8
Q ss_pred cCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHhh
Q psy8789 266 QDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIRD 345 (851)
Q Consensus 266 ~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~~ 345 (851)
|||++|||||||++|||||++|+|+.++++..+|+++|..||||+|||||++++|+|+|+||+|+++.++|+|||++|++
T Consensus 1 ~d~~~pLs~~~I~gtH~sy~~~~~~~~~~q~~~i~~qL~~GvR~~dirv~~~~~~~~~v~Hg~~~~~~~~~~dvL~~i~~ 80 (135)
T smart00148 1 QDMDKPLSHYFIPSSHNTYLTGKQLWGESSVEGYIQALDHGCRCVELDCWDGPDGEPVIYHGHTFTLPIKLSEVLEAIKD 80 (135)
T ss_pred CCCCccHhhCEEcccccccccCccccCcccHHHHHHHHHhCCCEEEEEcccCCCCCEEEEECCcccccEEHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhh
Q psy8789 346 HAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQ 400 (851)
Q Consensus 346 ~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~ 400 (851)
+||..+.|||||+||+||+.++|.+||++|+++||++|+..|.......+|||++
T Consensus 81 fl~~~p~e~VIl~l~~~~~~~~~~~l~~~l~~~~g~~l~~~~~~~~~~~~ps~~~ 135 (135)
T smart00148 81 FAFVTSPYPVILSLENHCSPDQQAKMAQMFKEIFGDMLYTPPLTSSLEVLPSPEQ 135 (135)
T ss_pred HHHhCCCCcEEEeehhhCCHHHHHHHHHHHHHHHhHhhcCCCCccCcCcCCCCCC
Confidence 9999999999999999999999999999999999999999887655678999975
No 32
>PF00388 PI-PLC-X: Phosphatidylinositol-specific phospholipase C, X domain This entry is for the whole phospholipase C protein; InterPro: IPR000909 Phosphatidylinositol-specific phospholipase C (3.1.4.11 from EC), a eukaryotic intracellular enzyme, plays an important role in signal transduction processes []. It catalyzes the hydrolysis of 1-phosphatidyl-D-myo-inositol-3,4,5-triphosphate into the second messenger molecules diacylglycerol and inositol-1,4,5-triphosphate. This catalytic process is tightly regulated by reversible phosphorylation and binding of regulatory proteins [, , ]. In mammals, there are at least 6 different isoforms of PI-PLC, they differ in their domain structure, their regulation, and their tissue distribution. Lower eukaryotes also possess multiple isoforms of PI-PLC. All eukaryotic PI-PLCs contain two regions of homology, sometimes referred to as the 'X-box' and 'Y-box'. The order of these two regions is always the same (NH2-X-Y-COOH), but the spacing is variable. In most isoforms, the distance between these two regions is only 50-100 residues but in the gamma isoforms one PH domain, two SH2 domains, and one SH3 domain are inserted between the two PLC-specific domains. The two conserved regions have been shown to be important for the catalytic activity. By profile analysis, we could show that sequences with significant similarity to the X-box domain occur also in prokaryotic and trypanosome PI-specific phospholipases C. Apart from this region, the prokaryotic enzymes show no similarity to their eukaryotic counterparts.; GO: 0004629 phospholipase C activity, 0006629 lipid metabolic process, 0035556 intracellular signal transduction; PDB: 2FJU_B 2ZKM_X 3V18_A 3V1H_A 3V16_A 3QR1_D 3EA3_A 3EA1_A 2OR2_A 1T6M_B ....
Probab=100.00 E-value=1.7e-35 Score=287.76 Aligned_cols=144 Identities=44% Similarity=0.660 Sum_probs=131.7
Q ss_pred cCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHhhcc
Q psy8789 268 MTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIRDHA 347 (851)
Q Consensus 268 m~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~~~a 347 (851)
|+.|+|||||++||||||+++|+.+++....|.++|..||||++|+||++++++|.|+||++.++.++|+|||++|++++
T Consensus 1 ms~P~th~si~~sh~t~~~~~~~~~~~Q~~~i~~QL~~GiR~lDlrv~~~~~~~~~v~Hg~~~~~~~~~~dvL~~i~~fl 80 (146)
T PF00388_consen 1 MSIPGTHDSISSSHNTYLTGGQLWSKTQSWSIREQLESGIRYLDLRVWDGNDGELVVYHGITSTSGITFEDVLNDIRDFL 80 (146)
T ss_dssp TCSEGGGEEEGCBSSTTBSSTSHHC-B-SHHHHHHHHTT--EEEEEEEEETTSSEEEEETTSEE-EEEHHHHHHHHHHHT
T ss_pred CCCCcccceecccCCCcccccccccCcchHhHHHHHhccCceEEEEEEcCCCCceEEEeCCEeeeeEeHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999988999999999999999999999999999
Q ss_pred cccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCC--CCCCCCChhhhhccccccccc
Q psy8789 348 FETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEK--NETVLPSPHQLRGKILLKHKK 411 (851)
Q Consensus 348 f~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~--~~~~lpsp~~l~~kilik~k~ 411 (851)
|+.+.+||||++++||+.++|..+|++|+++||+.|+..|... ....+|+|++|||||||..||
T Consensus 81 ~~~p~E~VIl~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~ptl~elrgKIvl~~r~ 146 (146)
T PF00388_consen 81 FEHPSEPVILSLKHEYSPEQQNKLAEILKEILGDRLYQPPPDPWYQENNLPTLGELRGKIVLLRRK 146 (146)
T ss_dssp THSTTS-EEEEEEEESTHHHHHHHHHHHHHHHGGGBTTSTTTTCSTTSSS-BTTTTTTSEEEEEE-
T ss_pred hcCCCeEEEEEeecccchhhHHHHHHHHHHHHhhhhcCCcccccccCCCCCChHHhcCcEEEEEcC
Confidence 9999999999999999999999999999999999999987663 578999999999999999986
No 33
>KOG0790|consensus
Probab=99.96 E-value=7.9e-29 Score=261.84 Aligned_cols=225 Identities=30% Similarity=0.538 Sum_probs=186.7
Q ss_pred CCCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeCCeeeEEEEeeecCCCcEEeccCceecChHH
Q psy8789 500 GEKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQGRVNHCRIRSKPESGQFYLVEKSYFDSLYS 579 (851)
Q Consensus 500 ~~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~F~sl~e 579 (851)
+..|||..|+ -.+||.||+. .+.+|+||.|.|++++|+|+||++.++.|.|.+|.. .++.|.+.++..|.++.|
T Consensus 3 s~~wfh~~~~--g~~ae~Ll~~--~g~dgsfl~r~s~sNp~~fsl~~r~~~~v~hikiq~--~~~~~~l~~gekfat~~E 76 (600)
T KOG0790|consen 3 SRRWFHPDLS--GVEAETLLKE--RGVDGSFLARPSESNPGDFSLSVRRGDKVTHIKIQN--SGDFYDLYGGEKFATLAE 76 (600)
T ss_pred chhhcCCCcc--chhHHHHHHH--hccccchhhccccCCCcceeEEEEeCCceEEEEEee--cCccccccCCccccchHH
Confidence 4679999999 7999999999 469999999999999999999999999999999973 334588899999999999
Q ss_pred HHHHHhhcC--CC-CCcceeEecCCCCCCCCccccccccccccchhhhhhhhcccCCCceeeecCCCCCCCCCCCCCCCC
Q psy8789 580 LISHYRTNH--LR-SQEFLITLQEPVPQPNQHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYEPVPQPNQ 656 (851)
Q Consensus 580 LI~~y~~~~--l~-~~gl~~~L~~p~~~~~~~~~~~~~~~~l~~~~ae~~l~~v~~dG~flvr~~~~~~~~~~p~~~~~~ 656 (851)
||+||..++ |+ .+|..+.|++|+.-..|
T Consensus 77 Lvqyyme~~~~lkekng~~ielK~pl~cAdp------------------------------------------------- 107 (600)
T KOG0790|consen 77 LVQYYMEHHGQLKEKNGDVIELKYPLNCADP------------------------------------------------- 107 (600)
T ss_pred HHHHHHhhhHHHHhcCCCEEEecCCCccCCc-------------------------------------------------
Confidence 999999876 33 47888888888743211
Q ss_pred CCCCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCC---------eeeEEEEEEcCcEEEeCCc-cc
Q psy8789 657 HEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAED---------KIKHCRIRVEGRLYTIGTT-QF 726 (851)
Q Consensus 657 ~~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~---------~v~H~~I~~~~~~~~~~~~-~F 726 (851)
.++.||||+++-.+||.||..++++|+||||+|.+.||+|+|||++++ +|.|..|.+.++.|.+++. .|
T Consensus 108 -tserWfHG~LsgkeAekLl~ekgk~gsfLvReSqs~PGdfVlSvrTdd~~~~~~~~~kVtHvmI~~q~~kydVGgge~F 186 (600)
T KOG0790|consen 108 -TSERWFHGHLSGKEAEKLLQEKGKHGSFLVRESQSHPGDFVLSVRTDDKKESNDSKLKVTHVMIRCQEGKYDVGGGERF 186 (600)
T ss_pred -hhhhhhccCCCchhHHHHHHhcCCCccEEEeccccCCCceEEEEEcCCcccCCCCccceEEEEEEecccccccCCcccc
Confidence 113499999999999999988888999999999999999999999976 8999999998899988877 99
Q ss_pred CCHHHHHHHhhhCCCcc----ceeecCCCcHhHHhhcCC---------CCCCCCCCCCCCCCCCCCC
Q psy8789 727 ESLVELISYYERHPLYK----KIELWYPVSEDLIQRMGL---------EPDDNTVSGTPGYMDPASF 780 (851)
Q Consensus 727 ~sl~eLV~~y~~~~l~~----~~~L~~Pv~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ 780 (851)
+||.+||+||+++++.+ .+.|+.|+....+.+..- ..+.......++|.+...+
T Consensus 187 ~sltdLidhykknpmvEt~gtvv~LrqP~naTrI~Aa~i~~Rve~l~k~~e~~d~~k~GfwEEFesL 253 (600)
T KOG0790|consen 187 DSLTDLVEHYKKNPMVETLGTVVYLRQPLNATRINAADIENRVEELNKKQESEDTAKAGFWEEFESL 253 (600)
T ss_pred chHHHHHHHhccCchhhhcceeEEeeccccccchhhhhHHHHHHHHhccccchhhhhcchhHHHHHh
Confidence 99999999999999766 568999998766644321 1111112346778776655
No 34
>KOG2996|consensus
Probab=99.95 E-value=6.2e-28 Score=261.21 Aligned_cols=199 Identities=29% Similarity=0.533 Sum_probs=156.8
Q ss_pred cCCCceeeecCCCCCCCCCCC---------CC-----CCCCCCCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCc
Q psy8789 631 PSDGAFLVRPSENDNSSYEPV---------PQ-----PNQHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSS 696 (851)
Q Consensus 631 ~~dG~flvr~~~~~~~~~~p~---------~~-----~~~~~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~ 696 (851)
..+.+|.-|...++.+|+-|. ++ +..++.++||.|.|-|..||..|++.+ +|+||||.+....+.
T Consensus 642 ~~s~~w~gr~~~sr~sg~fpss~vkp~~~vpr~~~~~~~d~s~~~WyaG~MERaqaes~Lk~~~-ngT~LVR~r~kea~e 720 (865)
T KOG2996|consen 642 AESSWWEGRNHGSRESGNFPSSTVKPCPSVPRQQDYVPTDYSEFPWYAGEMERAQAESTLKNRP-NGTYLVRYRTKEAKE 720 (865)
T ss_pred CCCcccccCCccCCccCCCCccccCcCCCCCCCCCCCccchhhhhhhcchHhhhhhhhHhhcCC-CceEEEEecccchhh
Confidence 344556667777777777652 22 566788899999999999999999998 999999999888899
Q ss_pred eEEEEEeCCeeeEEEEEEcCcEE-EeCCcccCCHHHHHHHhhhCCCcc-----ceeecCCCcHhHHhhcCCCCCCCCCCC
Q psy8789 697 YVISFRAEDKIKHCRIRVEGRLY-TIGTTQFESLVELISYYERHPLYK-----KIELWYPVSEDLIQRMGLEPDDNTVSG 770 (851)
Q Consensus 697 ~~LSv~~~~~v~H~~I~~~~~~~-~~~~~~F~sl~eLV~~y~~~~l~~-----~~~L~~Pv~~~~~~~~~~~~~~~~~~~ 770 (851)
|+||+++++.|+|++|...+|++ +-++..|.|+.|||+||+.+++.. .++|++|...+.-.+.... ..+.
T Consensus 721 ~AISikynnevKHikI~~~dg~~~i~E~k~F~sl~ELVeyYq~~sLke~Fk~LDTtLk~Pyke~e~sa~~~~----~~~~ 796 (865)
T KOG2996|consen 721 FAISIKYNNEVKHIKIETNDGKVHITEDKKFNSLVELVEYYQSHSLKEIFKALDTTLKFPYKEPEHSAGQRG----NRAG 796 (865)
T ss_pred eeEEEEeccccceEEEEecCCeEEechhhhhhhHHHHHHHHHhccHHHHHHHhhhhhcCCCcChhhhhhhcc----cccc
Confidence 99999999999999999955555 555669999999999999999775 6889999985432111100 0000
Q ss_pred CCCCCCCCCC-CCCceEEEEEEeecCCCCCCcccCCCCEEEEeEec--CCCeEEEEECCceEEEecCCCccccC
Q psy8789 771 TPGYMDPASF-TPASITVKALYDYQARNDDELSFPKHAIISNVTRA--EGGWWRGDYGGKRMHWFPSNYVAEIE 841 (851)
Q Consensus 771 ~~~~~~~~~~-~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~--~~gWw~g~~~g~~~G~fP~nyv~~i~ 841 (851)
+... |...-.++|-|||.+.+-.||||++||+|.|+.+. +.|||+|+++|+. ||||++||++-.
T Consensus 797 ------~sv~s~~~~g~AvarYdf~ard~~eLSlk~GDvV~i~~k~g~d~GWWkGevngrv-GwFPstYVee~~ 863 (865)
T KOG2996|consen 797 ------NSVLSPKVVGTAVARYDFCARDMRELSLKEGDVVKIYDKVGEDQGWWKGEVNGRV-GWFPSTYVEEDD 863 (865)
T ss_pred ------ccccCcceeeeeeeccccCCCchhhcccccCCEEEEehhccccCceecceecCcc-cccccccccccC
Confidence 1111 22234688899999999999999999999999876 4699999999999 999999998754
No 35
>KOG4637|consensus
Probab=99.94 E-value=1.7e-27 Score=246.31 Aligned_cols=251 Identities=29% Similarity=0.508 Sum_probs=177.8
Q ss_pred CCCCCCCCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeCCeeeEEEEeeecCCCcEEeccCcee
Q psy8789 495 DELHFGEKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQGRVNHCRIRSKPESGQFYLVEKSYF 574 (851)
Q Consensus 495 ~~~~~~~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~F 574 (851)
...+..++||||.|+ |+++...|... |||+||||+..+-+|+|+||++.+|.++-.+|-++ +|+|-+.+...|
T Consensus 17 ~~~L~~a~WYWgdis--Reev~~~L~d~---PDGsFlVRdAstm~GdYTLtl~k~g~~KLikI~h~--DgKyGF~d~ltf 89 (464)
T KOG4637|consen 17 EDELQDAEWYWGDIS--REEVNKKLRDQ---PDGSFLVRDASTMQGDYTLTLRKGGNNKLIKIVHR--DGKYGFSDPLTF 89 (464)
T ss_pred chhhhhccccccccC--HHHHHHHhcCC---CCCcEEeeccccCCCceEEEEecCCccceeeeEEe--cCccCCCCchhh
Confidence 344677899999999 99999999975 99999999887789999999999999999999754 678878888899
Q ss_pred cChHHHHHHHhhcCCC--CCcceeEecCCCCCCC-Ccccccccc------------c-------ccc-------chhhh-
Q psy8789 575 DSLYSLISHYRTNHLR--SQEFLITLQEPVPQPN-QHEDKEWYH------------P-------TAT-------RSQAE- 624 (851)
Q Consensus 575 ~sl~eLI~~y~~~~l~--~~gl~~~L~~p~~~~~-~~~~~~~~~------------~-------~l~-------~~~ae- 624 (851)
+|+.+||+||++++|. ++.|.++|.+|+.+-. ....++.+. . ..+ +...|
T Consensus 90 ~SVVelIn~yr~~SL~~yN~~LDvrLlyPVs~~r~dq~~kp~~~~~~~~~~~~~~~q~lq~~~~~~er~~~~y~~~~qEl 169 (464)
T KOG4637|consen 90 NSVVELINHYRNESLAQYNPKLDVRLLYPVSRYRQDQNVKPDFNINAVGKKLREYHQQLQEKSLEYERLYEEYTRTSQEL 169 (464)
T ss_pred HHHHHHHHHHhhhHHHhhCcccceeeechHHHhhhccccCCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999986 6889999999998521 111111100 0 000 00000
Q ss_pred --------------------------------hhhhcc-cCCCc--ee--------------------------------
Q psy8789 625 --------------------------------DLLRRV-PSDGA--FL-------------------------------- 637 (851)
Q Consensus 625 --------------------------------~~l~~v-~~dG~--fl-------------------------------- 637 (851)
+.+.++ .+.|. ..
T Consensus 170 q~k~t~~~afn~tikife~q~~~~e~~~ka~~d~~~~eqG~qg~~e~~~~~~a~N~~~~ks~i~ei~~sl~~l~d~lk~~ 249 (464)
T KOG4637|consen 170 QMKRTAIEAFNETIKIFEEQCGTQENLSKAYIDRFRREQGSQGNSEKEIGRIANNYDKLKSRIREIHDSLTRLEDDLKAL 249 (464)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhHHHHHhccCCchHHHHHHHHhhhHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 000000 00010 00
Q ss_pred eecC----CCC--------------CCCC------------------CC-----------------------CCCCC-CC
Q psy8789 638 VRPS----END--------------NSSY------------------EP-----------------------VPQPN-QH 657 (851)
Q Consensus 638 vr~~----~~~--------------~~~~------------------~p-----------------------~~~~~-~~ 657 (851)
++.. .+. .... +| -.... ..
T Consensus 250 ~q~~~~~~enr~~e~m~l~k~~nslkp~l~~lr~~~d~y~~~l~~~~~~~k~l~~~l~~~~~~t~~qy~l~et~~~~ph~ 329 (464)
T KOG4637|consen 250 IQALRSNSENRLCELMELDKAMNSLKPDLIQLRKIRDQYLVWLMIKGVRQKVLNLWLGMENEWTDAQYLLCETDENLPHN 329 (464)
T ss_pred HHHHhhhhhhhhHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHhcCccHHHHHHHHhhhhcCCHHHHHHhcccccCcch
Confidence 0000 000 0000 00 01112 23
Q ss_pred CCCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCCeeeEEEEEEcCcEEEeCCc--ccCCHHHHHHH
Q psy8789 658 EDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAEDKIKHCRIRVEGRLYTIGTT--QFESLVELISY 735 (851)
Q Consensus 658 ~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~~~~~--~F~sl~eLV~~ 735 (851)
+.-.|+.+.+.|..||.+|++.+ +|+||||.|.. .|+|+|||..++.|+||.|.+....|-+..+ .+.||.+||.|
T Consensus 330 ~e~~w~~~~a~r~kAe~llrg~~-dGtFLIR~ss~-~g~yalSV~~~~~V~HClIy~tatG~GFa~pyn~y~tlk~lV~h 407 (464)
T KOG4637|consen 330 DEKTWRVRDANRDKAEELLRGKP-DGTFLIRESSK-GGCYALSVVHDGEVKHCLIYQTATGFGFAEPYNLYSTLKELVLH 407 (464)
T ss_pred hhhHhHHhhhhHHHHHHHhcCCC-CCeEEEeeccC-CCceEEEEEECCceeeeEEeeccccccccchhHHHHHHHHHHHH
Confidence 34479999999999999999998 99999999654 8999999999999999999995444444444 99999999999
Q ss_pred hhhCCCcc-----ceeecCCCcHh
Q psy8789 736 YERHPLYK-----KIELWYPVSED 754 (851)
Q Consensus 736 y~~~~l~~-----~~~L~~Pv~~~ 754 (851)
|+++++.. .++|++||-..
T Consensus 408 Y~h~SLe~HnDal~ttLr~Pv~~~ 431 (464)
T KOG4637|consen 408 YQHTSLEQHNDALTTTLRYPVFAQ 431 (464)
T ss_pred HhhhhHHhhccccccccccceecc
Confidence 99998654 67888888643
No 36
>KOG4792|consensus
Probab=99.92 E-value=4.1e-25 Score=214.88 Aligned_cols=169 Identities=26% Similarity=0.476 Sum_probs=142.0
Q ss_pred CCCCCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCCeeeEEEEEE--c---C---cEEEeCCcccC
Q psy8789 656 QHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAEDKIKHCRIRV--E---G---RLYTIGTTQFE 727 (851)
Q Consensus 656 ~~~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~~v~H~~I~~--~---~---~~~~~~~~~F~ 727 (851)
+.+...||+|.|||+||.++|.+.. .|.||||+|.+.+|.|+|||..+.+|.||.|.. . + ..+.+++..|+
T Consensus 7 ~~er~swYfg~mSRqeA~~lL~~~r-~G~FLvRDSst~pGdYvLsV~E~srVshYiIn~~~p~~~~~~~~~~rIgdQ~Fd 85 (293)
T KOG4792|consen 7 SSERSSWYFGPMSRQEAVALLQGQR-HGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSPPSPAQPPPSRLRIGDQEFD 85 (293)
T ss_pred hhhccceecCcccHHHHHHHhcCcc-eeeEEEecCCCCCCceEEEEecCcceeeeeecCCCCCccCCCcceeeecccccc
Confidence 4556789999999999999999987 999999999999999999999999999999998 1 2 27999999999
Q ss_pred CHHHHHHHhhhCCCccceeecCCCcHhHHhhcCCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEeecCCCCCCcccCCCC
Q psy8789 728 SLVELISYYERHPLYKKIELWYPVSEDLIQRMGLEPDDNTVSGTPGYMDPASFTPASITVKALYDYQARNDDELSFPKHA 807 (851)
Q Consensus 728 sl~eLV~~y~~~~l~~~~~L~~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~dy~~~~~~eLs~~~Gd 807 (851)
+|+.|++||+.+-|- .++|..|.++... .+ .+... ......++++|||.+.+.++|.|++|+
T Consensus 86 ~lPaLL~fykihyLd-tttLi~p~~r~~~-----~~----------~~~~~--~~~~~~vr~~fdF~G~deeDLPFkkGe 147 (293)
T KOG4792|consen 86 SLPALLEFYKIHYLD-TTTLIEPAKRSRQ-----GS----------GVILR--QEEAEYVRALFDFNGNDEEDLPFKKGE 147 (293)
T ss_pred chHHHHhheeEeeec-ccccccccccccc-----cc----------Ccccc--hhhhhheeeeeccCCCccccCCcccCc
Confidence 999999999988665 5668888887652 00 00000 112457899999999999999999999
Q ss_pred EEEEeEecCCCeEEEEECCceEEEecCCCccccCCC
Q psy8789 808 IISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEIEPQ 843 (851)
Q Consensus 808 ~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i~~~ 843 (851)
++.|++|.+..||.++...+..|.+|.+||+.....
T Consensus 148 iL~I~~K~eeqWW~Arns~Gk~GmIPvpYVe~~~~~ 183 (293)
T KOG4792|consen 148 ILRIRDKPEEQWWNARNSEGKRGMIPVPYVEKYRPA 183 (293)
T ss_pred EEEEecCcHHHhhhhhccCCcccceechHHHhhhhh
Confidence 999999999999999986655699999999986543
No 37
>KOG4792|consensus
Probab=99.88 E-value=9.6e-22 Score=191.52 Aligned_cols=102 Identities=38% Similarity=0.552 Sum_probs=84.9
Q ss_pred CCCCCCCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeCCeeeEEEEeeecCC--C----cEEec
Q psy8789 496 ELHFGEKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQGRVNHCRIRSKPES--G----QFYLV 569 (851)
Q Consensus 496 ~~~~~~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~--g----~~~~~ 569 (851)
++.+...||+|.|| |++|..+|..+ ..|+||||+|.+.+|+|+|||+-+.+|.||.|...... + .|.|.
T Consensus 6 D~~er~swYfg~mS--RqeA~~lL~~~---r~G~FLvRDSst~pGdYvLsV~E~srVshYiIn~~~p~~~~~~~~~~rIg 80 (293)
T KOG4792|consen 6 DSSERSSWYFGPMS--RQEAVALLQGQ---RHGVFLVRDSSTSPGDYVLSVSENSRVSHYIINSSPPSPAQPPPSRLRIG 80 (293)
T ss_pred ChhhccceecCccc--HHHHHHHhcCc---ceeeEEEecCCCCCCceEEEEecCcceeeeeecCCCCCccCCCcceeeec
Confidence 34566799999999 99999999986 69999999999999999999999999999999841111 1 35555
Q ss_pred cCceecChHHHHHHHhhcCCCCCcceeEecCCCCCCCC
Q psy8789 570 EKSYFDSLYSLISHYRTNHLRSQEFLITLQEPVPQPNQ 607 (851)
Q Consensus 570 ~~~~F~sl~eLI~~y~~~~l~~~gl~~~L~~p~~~~~~ 607 (851)
+..|++|+.|++||+-+-|.+ +.|..|.+++..
T Consensus 81 -dQ~Fd~lPaLL~fykihyLdt----ttLi~p~~r~~~ 113 (293)
T KOG4792|consen 81 -DQEFDSLPALLEFYKIHYLDT----TTLIEPAKRSRQ 113 (293)
T ss_pred -cccccchHHHHhheeEeeecc----cccccccccccc
Confidence 589999999999999888753 678888887643
No 38
>KOG0790|consensus
Probab=99.82 E-value=1.6e-20 Score=199.20 Aligned_cols=163 Identities=33% Similarity=0.558 Sum_probs=137.1
Q ss_pred ccccccccccceeEeecCeEE-EEcCccchhhhhhhhhhhcC-cccccceeccCCccccccccCCCCCCCCCCCCCCccC
Q psy8789 428 EGKLAEDKIKHCRIRVEGRLY-TIGTTQFESLVELISYYERH-PLYKKIELWYPVSEDLIQRMGLGVPNDELHFGEKWFH 505 (851)
Q Consensus 428 ~~~~~~~~~~~~~ik~~g~~~-~~~~~~F~sL~~li~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Wyh 505 (851)
.+...++++.|++|+..|++| ++++..|++|.+|+.||+.+ ..+.... ++..++..+++..++ .++.|||
T Consensus 43 l~~r~~~~v~hikiq~~~~~~~l~~gekfat~~ELvqyyme~~~~lkekn-------g~~ielK~pl~cAdp-tserWfH 114 (600)
T KOG0790|consen 43 LSVRRGDKVTHIKIQNSGDFYDLYGGEKFATLAELVQYYMEHHGQLKEKN-------GDVIELKYPLNCADP-TSERWFH 114 (600)
T ss_pred EEEEeCCceEEEEEeecCccccccCCccccchHHHHHHHHhhhHHHHhcC-------CCEEEecCCCccCCc-hhhhhhc
Confidence 344678999999998877665 99999999999999999988 4555443 344556666665553 5678999
Q ss_pred CCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeCC---------eeeEEEEeeecCCCcEEeccCceecC
Q psy8789 506 GRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQG---------RVNHCRIRSKPESGQFYLVEKSYFDS 576 (851)
Q Consensus 506 G~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~---------~v~H~~I~~~~~~g~~~~~~~~~F~s 576 (851)
|.++ ..+||.||.. .+.+|+||||+|.+.||+|+||++.++ +|.|..|+. ..|+|-++++..|+|
T Consensus 115 G~Ls--gkeAekLl~e--kgk~gsfLvReSqs~PGdfVlSvrTdd~~~~~~~~~kVtHvmI~~--q~~kydVGgge~F~s 188 (600)
T KOG0790|consen 115 GHLS--GKEAEKLLQE--KGKHGSFLVRESQSHPGDFVLSVRTDDKKESNDSKLKVTHVMIRC--QEGKYDVGGGERFDS 188 (600)
T ss_pred cCCC--chhHHHHHHh--cCCCccEEEeccccCCCceEEEEEcCCcccCCCCccceEEEEEEe--cccccccCCccccch
Confidence 9999 7999999977 569999999999999999999999865 899999984 458999999999999
Q ss_pred hHHHHHHHhhcCCC-CCcceeEecCCCCC
Q psy8789 577 LYSLISHYRTNHLR-SQEFLITLQEPVPQ 604 (851)
Q Consensus 577 l~eLI~~y~~~~l~-~~gl~~~L~~p~~~ 604 (851)
|.+||+||+.+++. +.|..+.|..|+..
T Consensus 189 ltdLidhykknpmvEt~gtvv~LrqP~na 217 (600)
T KOG0790|consen 189 LTDLVEHYKKNPMVETLGTVVYLRQPLNA 217 (600)
T ss_pred HHHHHHHhccCchhhhcceeEEeeccccc
Confidence 99999999999976 57888999999874
No 39
>KOG4278|consensus
Probab=99.82 E-value=3.4e-20 Score=204.18 Aligned_cols=181 Identities=26% Similarity=0.392 Sum_probs=147.2
Q ss_pred ccccccccccceeEeecCeEEEEc-CccchhhhhhhhhhhcCcccccceeccCCccccccccCCCCCCCCCCCCCCccCC
Q psy8789 428 EGKLAEDKIKHCRIRVEGRLYTIG-TTQFESLVELISYYERHPLYKKIELWYPVSEDLIQRMGLGVPNDELHFGEKWFHG 506 (851)
Q Consensus 428 ~~~~~~~~~~~~~ik~~g~~~~~~-~~~F~sL~~li~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WyhG 506 (851)
|.|++.+|-. +.|.+++.+-+++ +. + +.|..... .+.+|++|+ ++..+..+++.+.||||
T Consensus 97 YDFvasGdnt-LSitKGeklRvLGYN~------N--gEWcEart-KNGqGWVPS---------NyItPvNSLeKhsWYHG 157 (1157)
T KOG4278|consen 97 YDFVASGDNT-LSITKGEKLRVLGYNK------N--GEWCEART-KNGQGWVPS---------NYITPVNSLEKHSWYHG 157 (1157)
T ss_pred eeeeccccce-eeeecCceEEEeeecC------C--Ccceeecc-cCCCccccc---------cccccccchhhcccccC
Confidence 3476666666 4788788888776 33 4 88988743 556699998 78888889999999999
Q ss_pred CCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeCCeeeEEEEeeecCCCcEEeccCceecChHHHHHHHhh
Q psy8789 507 RLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQGRVNHCRIRSKPESGQFYLVEKSYFDSLYSLISHYRT 586 (851)
Q Consensus 507 ~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~F~sl~eLI~~y~~ 586 (851)
+++ |..||.+|.+ +..|+||||+|++.+|.|+||+++.|+|.||+|. .+.+|+.|+.....|.+|.|||+||+.
T Consensus 158 pvS--RsaaEy~LsS---gInGSFLVRESEsSpgQ~sISlRyeGRVyHYRIN-t~~dgK~yvt~EsrF~TLaELVHHHSt 231 (1157)
T KOG4278|consen 158 PVS--RSAAEYILSS---GINGSFLVRESESSPGQYSISLRYEGRVYHYRIN-TDNDGKMYVTQESRFRTLAELVHHHST 231 (1157)
T ss_pred ccc--cchhhhhhhc---CcccceEEeeccCCCcceeEEEEecceEEEEEee-ccCCccEEEeehhhhhHHHHHHhhccc
Confidence 999 9999999987 3899999999999999999999999999999998 578899999998999999999999999
Q ss_pred cCCCCCcceeEecCCCCCCCCcccccc--ccccccchhhhhhhhcccCCCce
Q psy8789 587 NHLRSQEFLITLQEPVPQPNQHEDKEW--YHPTATRSQAEDLLRRVPSDGAF 636 (851)
Q Consensus 587 ~~l~~~gl~~~L~~p~~~~~~~~~~~~--~~~~l~~~~ae~~l~~v~~dG~f 636 (851)
.. +||.+.|.+|.++.+..+--+. -++.|+-++.+..+....+.|++
T Consensus 232 vA---DGLittLhYPApK~nKptvygvSPn~DkWEmeRtdItMkhKLGGGQY 280 (1157)
T KOG4278|consen 232 VA---DGLITTLHYPAPKKNKPTVYGVSPNADKWEMERTDITMKHKLGGGQY 280 (1157)
T ss_pred cc---cceeEeeeccCccCCCCceeeecCCcchhhccchheeeeeccCCCcc
Confidence 88 9999999999997653332111 12566666666666555555553
No 40
>KOG1264|consensus
Probab=99.82 E-value=5.1e-20 Score=206.41 Aligned_cols=170 Identities=31% Similarity=0.540 Sum_probs=143.5
Q ss_pred CCCCcc---cccccc-cccccccccccceeEee---cC--eEEEEcCccchhhhhhhhhhhcCcccccceeccCCccccc
Q psy8789 415 GSDEQT---PCAIAK-DEGKLAEDKIKHCRIRV---EG--RLYTIGTTQFESLVELISYYERHPLYKKIELWYPVSEDLI 485 (851)
Q Consensus 415 ~~~~~~---~~~~~~-~~~~~~~~~~~~~~ik~---~g--~~~~~~~~~F~sL~~li~~w~~~~~~~~~~~~~~~~~~~~ 485 (851)
+..|.| .+|++| +.+|+..+.+.||+|+- +| .||+.|+--|+||++||.||+.+.+.+.. -+
T Consensus 562 dGtFlVReS~tFvgDytLSfwr~grv~HcRIrsk~e~gt~Kyyl~dN~vfdslY~LI~~Y~~~~Lr~ae---------F~ 632 (1267)
T KOG1264|consen 562 DGTFLVRESETFVGDYTLSFWRSGRVQHCRIRSKMEGGTLKYYLTDNLVFDSLYALIQHYRETHLRCAE---------FE 632 (1267)
T ss_pred CccEEEeeccccccceeeeeeECCceeeEEEEeeecCCceeEEEecchhHHHHHHHHHHHHhccccccc---------eE
Confidence 335665 789999 99999999999999984 44 48899999999999999999988665432 22
Q ss_pred cccCCCCCCCCCCCCCCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeCCeeeEEEEeeecCCCc
Q psy8789 486 QRMGLGVPNDELHFGEKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQGRVNHCRIRSKPESGQ 565 (851)
Q Consensus 486 ~~~~~~~~~~~~~~~~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~ 565 (851)
..+.+++|...+|++++|||...+ |++||++|..- -.+|+|||| +......|+||++.+|+++||+|.+ +|.
T Consensus 633 m~LtePvPqp~~He~k~W~~as~t--reqAE~mL~rv--p~DGaFLiR-~~~~~nsy~iSfr~~gkikHcRi~r---dGr 704 (1267)
T KOG1264|consen 633 MRLTEPVPQPNPHESKPWYHASLT--REQAEDMLMRV--PRDGAFLIR-KREGSNSYAISFRARGKIKHCRINR---DGR 704 (1267)
T ss_pred EEecCCCCCCCcccCCcccccccc--HHHHHHHHhhC--ccCcceEEE-eccCCceEEEEEEEcCcEeEEEEcc---Cce
Confidence 345689999999999999999999 99999999873 478999999 5567788999999999999999972 477
Q ss_pred EEeccCceecChHHHHHHHhhcCCCCCcceeEecCCCCC
Q psy8789 566 FYLVEKSYFDSLYSLISHYRTNHLRSQEFLITLQEPVPQ 604 (851)
Q Consensus 566 ~~~~~~~~F~sl~eLI~~y~~~~l~~~gl~~~L~~p~~~ 604 (851)
.|+.++..|.||.+||+||..++|.. .++|++|+..
T Consensus 705 ~fvl~t~~FesLv~lv~yY~k~~lyR---~mkLr~PVne 740 (1267)
T KOG1264|consen 705 HFVLGTSAFESLVELVSYYEKHPLYR---KMKLRYPVNE 740 (1267)
T ss_pred EEEeccHHHHHHHHHHHHHhcChhhh---cccccCcCCH
Confidence 77777788999999999999999753 3789999874
No 41
>cd08589 PI-PLCc_SaPLC1_like Catalytic domain of Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1-like proteins. This subfamily corresponds to the catalytic domain present in Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1 (SaPLC1) and similar proteins. The typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) catalyzes Ca2+-independent hydrolysis of the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). The catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. In contrast, SaPLC1 is the first known natural Ca2+-dependent bacterial PI-PLC. It is more closely related to the eukaryotic PI-PLCs rather than the typical bacterial PI-PLCs. It participates in PI metabolism to generate myo-inositol-1-phosphate and myo-inositol-1:2-cy
Probab=99.80 E-value=1.2e-19 Score=193.48 Aligned_cols=145 Identities=19% Similarity=0.314 Sum_probs=125.7
Q ss_pred cCcCCccccccccccCCccccC------------Ccc--ccCCCHHHHHHHHhcCccEEEEeeecCCC------------
Q psy8789 266 QDMTKPLSHYFINSSHNTYLTG------------DQF--SSESSCEAYVRCLRQGCRCIELDCWDGPD------------ 319 (851)
Q Consensus 266 ~dm~~pl~~Y~i~sshntyl~~------------~q~--~~~ss~~~y~~~l~~gcRcveld~wdg~~------------ 319 (851)
.+.+.||+||++-.|||+|..| +|+ ....+-.....+|..|+|-+|||+|..+.
T Consensus 3 ~~~~~pln~~~~igtHNSY~~~~~~~~~~~~~~~~~~~~~~~~s~~~i~~QLd~GvR~LELDv~~d~~gg~~a~P~~~~~ 82 (324)
T cd08589 3 AADALRLNQIQVVGTHNSYHKEIDPAELALLAVNPPLAEGLDYSHPPLADQLDSGVRQLELDVWADPEGGRYAHPLGLAP 82 (324)
T ss_pred ccCCCCccccEEEeecccccccCCchhhhhhcccccccccccCCCccHHHHHhhCcceEEEEEeecCCcccccccccccc
Confidence 4568999999999999999998 676 33455667889999999999999997653
Q ss_pred --------CCceEeecCCc---eeeeehHHHHHHHhhcccc-cCCCceEEEeccCCCH------------HHHHHHHHHH
Q psy8789 320 --------GTPIVYHGHTL---TTKIKFKDVVKTIRDHAFE-TSKYPVILSIEDNCSL------------PQQRVMAQIM 375 (851)
Q Consensus 320 --------~~p~v~hg~t~---t~~i~~~~v~~~i~~~af~-~s~yP~ils~e~hc~~------------~~q~~~a~~~ 375 (851)
+.--|+|+.++ |+...|.+||+.||+.+|. .++|||+|-||.|.+. +-|..+++.+
T Consensus 83 ~~~~~~~~~g~~V~H~~~~d~~t~C~~l~~cL~~Ik~W~~anP~hvPv~I~Le~kd~~~~~~~~~~~~~~~~~~~ld~~i 162 (324)
T cd08589 83 DDAAVMKKPGWKVSHIPDLDNRNNCVTLEDCLDDVRAWSDAHPGHVPIFIKLELKDGFSALPGGGVPFTARGPAQLDALI 162 (324)
T ss_pred cccccccCCCeEEEcCCCcCCCCChhhHHHHHHHHHHHHHhCCCcccEEEEEEeccCCccccCcccccchhHHHHHHHHH
Confidence 33469999988 8999999999999999997 8999999999999987 7899999999
Q ss_pred HHHhhc-ccCCCcCC-----C------CCCCCCChhhhhccccccccc
Q psy8789 376 LDIFKD-MLLIHPVE-----K------NETVLPSPHQLRGKILLKHKK 411 (851)
Q Consensus 376 ~~~~g~-~l~~~~~~-----~------~~~~lpsp~~l~~kilik~k~ 411 (851)
+++||+ +|++.+ + . .....|||++|||||||--+.
T Consensus 163 ~~vfG~~~L~tPd-dvrg~~~tL~~av~~~~WPtl~~lrGKvl~~~~~ 209 (324)
T cd08589 163 RSVLGDDKLITPD-DVRGGAATLDEAVRAGGWPTLSALRGKVLFVLDP 209 (324)
T ss_pred HHhcCCccEEcCc-cccccccchhhhhccCCCCChHHHCCCEEEEecC
Confidence 999999 898844 3 1 136899999999999999886
No 42
>KOG0197|consensus
Probab=99.78 E-value=5.5e-19 Score=195.50 Aligned_cols=196 Identities=29% Similarity=0.365 Sum_probs=154.1
Q ss_pred cccccccccccccccccceeEeecCe-EEEEcCccchhhhhhhhhhhcC-cccccceeccCCccccccccCCCCCCCCCC
Q psy8789 421 PCAIAKDEGKLAEDKIKHCRIRVEGR-LYTIGTTQFESLVELISYYERH-PLYKKIELWYPVSEDLIQRMGLGVPNDELH 498 (851)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~ik~~g~-~~~~~~~~F~sL~~li~~w~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (851)
+++.+| +.+..+.++++ .+++. +.+.+.. + ..||.. ....+..+|+|++.....+ ..++...+
T Consensus 14 ~valyd-~~s~~~~dLsf---~~Gd~~~~~~~~~------~--~~Ww~ar~~~~~~~g~ip~N~v~~~~---~~~~~~~l 78 (468)
T KOG0197|consen 14 VVALYD-YASRTPEDLSF---RKGDVVLILLETT------N--GDWWRARSLQLGQEGYIPSNYVARNR---GSPAFIKL 78 (468)
T ss_pred EEEecc-ccCCCcccccc---ccCceEEEeeccC------C--hhHHHHHHhhcCCCCcCcCceeeccc---cCCCcccc
Confidence 344444 66677888886 44777 7777777 7 888876 5558888899984332222 22344778
Q ss_pred CCCCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeCC------eeeEEEEeeecCCCcEE--ecc
Q psy8789 499 FGEKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQG------RVNHCRIRSKPESGQFY--LVE 570 (851)
Q Consensus 499 ~~~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~------~v~H~~I~~~~~~g~~~--~~~ 570 (851)
+.++||||.|+ |.+||+.|... ++..|+||||+|++.+|+|+||++... .|+||+|+. .++|.++ +..
T Consensus 79 ~~~~Wf~~~is--R~~ae~~ll~p-~~~~G~flvR~se~~~g~yslsv~~~~~~~~~~~v~hyri~~-~~~~~~~~~~~~ 154 (468)
T KOG0197|consen 79 SDEPWFFGKIS--REEAERQLLAP-ENKEGAFLVRESESDKGDYSLSVREGDSGGLGAKVKHYRIRQ-LDGGGLYPYIDE 154 (468)
T ss_pred ccCCchhcccc--HHHHHHhhcCC-CCCccceeeecccCCcCCeeEEEEeccccCCccceeeeeeeE-cCCCCeecCCCH
Confidence 88999999999 99999777766 788999999999999999999999865 899999984 5667677 888
Q ss_pred CceecChHHHHHHHhhcCCCCCcceeEecCCCCCCC---CccccccccccccchhhhhhhhcccCCCceeee
Q psy8789 571 KSYFDSLYSLISHYRTNHLRSQEFLITLQEPVPQPN---QHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVR 639 (851)
Q Consensus 571 ~~~F~sl~eLI~~y~~~~l~~~gl~~~L~~p~~~~~---~~~~~~~~~~~l~~~~ae~~l~~v~~dG~flvr 639 (851)
...|++|.+||+||+.++ +|++.+|..||.... |.+ .....+.|+..+.+..+.+..+.|+|..-
T Consensus 155 ~~~F~~l~~lv~~~~~~~---~gl~~~l~~p~~~~~~~~p~~-~~~~~d~wei~r~~l~l~~~LG~G~FG~V 222 (468)
T KOG0197|consen 155 RELFSSLQQLVNYYSKNA---DGLCTRLRDPCSKQGHTKPQT-PDLARDPWEIPREELKLIRELGSGQFGEV 222 (468)
T ss_pred HHhhhhHHHHHhhhhccC---cchhhcccCchhccCCCCCCC-CccccCCeeecHHHHHHHHHhcCCccceE
Confidence 889999999999999999 999999999998632 221 12226788888889888888999998753
No 43
>KOG3601|consensus
Probab=99.78 E-value=4.9e-20 Score=179.50 Aligned_cols=176 Identities=27% Similarity=0.421 Sum_probs=143.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCCeeeEEEEEE-cCcEE
Q psy8789 641 SENDNSSYEPVPQPNQHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAEDKIKHCRIRV-EGRLY 719 (851)
Q Consensus 641 ~~~~~~~~~p~~~~~~~~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~~v~H~~I~~-~~~~~ 719 (851)
...+..|++|.... .....+||+|.|+|..||++|++.. +|+||+|.+++.+|.|.+|+++...|.|+++.+ .-+.|
T Consensus 40 el~g~~g~~P~Nai-~~~~~~wve~~i~r~~ae~~l~~~~-~G~fl~r~s~sSPg~fsgsvr~~d~vqhfkvvrpa~~k~ 117 (222)
T KOG3601|consen 40 ELDGPEGFIPKNAI-RMKPHEWVEGLIPRPLAEDLLSKKR-DGDFLIRLSESSPGDFSGSVRFPDGVQHFKVVRPAFGKY 117 (222)
T ss_pred hhcCccccCccccc-ccccccceecccccchhhhhhhccC-cchhhhhhhhcCcccccccccCCCCceeccccccCcccc
Confidence 34566777775432 2335789999999999999999954 999999999999999999999999999999998 45788
Q ss_pred EeCCcccCCHHHHHHHhhhCCCccc--eeecCCCcHhHHhhcCCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEeecCCC
Q psy8789 720 TIGTTQFESLVELISYYERHPLYKK--IELWYPVSEDLIQRMGLEPDDNTVSGTPGYMDPASFTPASITVKALYDYQARN 797 (851)
Q Consensus 720 ~~~~~~F~sl~eLV~~y~~~~l~~~--~~L~~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~dy~~~~ 797 (851)
......|.++.+||+||..++.... +.|..--++. .|.+.++......++|||.++.
T Consensus 118 ~lw~skfnslnplv~Y~rt~s~~r~~qi~l~d~~~~~---------------------~~~~~~~~~~yqQa~~df~~~p 176 (222)
T KOG3601|consen 118 FLWSSKFNSLNPLVSYHRTASQSRNQQIFLRDMEPPP---------------------APLPPAPTNYYQQALYDFQPQP 176 (222)
T ss_pred ccchhhccCCCCCcccCcccccccceeeeeccccccc---------------------ccCCCCccchhhhhcCCCCCCC
Confidence 8898999999999999999987653 3332211110 0111223346789999999999
Q ss_pred CCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCcccc
Q psy8789 798 DDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEI 840 (851)
Q Consensus 798 ~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i 840 (851)
+.+|.|++||+|.|++..+.-||.|+..|.. |+||++||...
T Consensus 177 p~ql~f~~gq~~~v~~~ss~~ww~Gs~lg~a-giFpagyv~p~ 218 (222)
T KOG3601|consen 177 PGQLAFRRGQQIQVLDSSSPFWWFGSKLGRA-GIFPAGYVAPS 218 (222)
T ss_pred chhhccccCCcceeecCCCcchhhccccCce-eeecCcccccc
Confidence 9999999999999999999999999999998 99999999764
No 44
>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr). SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.
Probab=99.76 E-value=3.4e-18 Score=153.28 Aligned_cols=94 Identities=48% Similarity=0.792 Sum_probs=82.7
Q ss_pred CccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeCCeeeEEEEeeecCCCcEEeccCceecChHHHH
Q psy8789 502 KWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQGRVNHCRIRSKPESGQFYLVEKSYFDSLYSLI 581 (851)
Q Consensus 502 ~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~F~sl~eLI 581 (851)
+||||.|+ |++||++|+.. ++|+||||.|.+.++.|+||++.+++++||+|. ...++.++......|+||.|||
T Consensus 1 ~w~~g~i~--r~~Ae~~L~~~---~~G~FLiR~s~~~~~~~~Lsv~~~~~v~H~~I~-~~~~~~~~~~~~~~f~sl~eLv 74 (94)
T cd00173 1 PWYHGPIS--REEAEELLKKK---PDGTFLVRDSESSPGDYVLSVRVKGKVKHYRIE-RTDDGYYLLGEGRSFPSLPELI 74 (94)
T ss_pred CccccCCC--HHHHHHHHhcC---CCceEEEEecCCCCCCEEEEEEECCEEEEEEEE-ECCCCeEEecCCCccCCHHHHH
Confidence 69999999 99999999974 899999999988899999999999999999998 4454444444478999999999
Q ss_pred HHHhhcCCCCCcceeEecCCC
Q psy8789 582 SHYRTNHLRSQEFLITLQEPV 602 (851)
Q Consensus 582 ~~y~~~~l~~~gl~~~L~~p~ 602 (851)
+||+.+++ .+++++.|+.||
T Consensus 75 ~~y~~~~~-~~~~~~~L~~p~ 94 (94)
T cd00173 75 EHYQKNPL-SDGLGVKLRYPV 94 (94)
T ss_pred HHHhhCcc-CCCcccEeCCcC
Confidence 99999987 678889999886
No 45
>smart00252 SH2 Src homology 2 domains. Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.
Probab=99.74 E-value=9.2e-18 Score=147.27 Aligned_cols=83 Identities=52% Similarity=0.872 Sum_probs=75.5
Q ss_pred CCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeCCeeeEEEEeeecCCCcEEeccCceecChHHH
Q psy8789 501 EKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQGRVNHCRIRSKPESGQFYLVEKSYFDSLYSL 580 (851)
Q Consensus 501 ~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~F~sl~eL 580 (851)
++||||.|+ |++||++|... ++|+||||.|++.++.|+||++.++.++||+|.. ..+|.|++.+...|+||.+|
T Consensus 1 ~~w~~g~i~--r~~Ae~lL~~~---~~G~FLvR~s~~~~~~~~Lsv~~~~~~~h~~I~~-~~~~~~~l~~~~~F~sl~eL 74 (84)
T smart00252 1 QPWYHGFIS--REEAEKLLKNE---GDGDFLVRDSESEPGDYVLSVRVKGKVKHYRIRR-NEDGKFYLDGGRKFPSLVEL 74 (84)
T ss_pred CCeecccCC--HHHHHHHHhcC---CCcEEEEEcCCCCCCCEEEEEEECCEEEEEEEEE-CCCCcEEECCCCccCCHHHH
Confidence 589999999 99999999884 5999999999988999999999999999999984 45578999888999999999
Q ss_pred HHHHhhcCC
Q psy8789 581 ISHYRTNHL 589 (851)
Q Consensus 581 I~~y~~~~l 589 (851)
|+||+.+++
T Consensus 75 I~~y~~~~~ 83 (84)
T smart00252 75 VEHYQKNSL 83 (84)
T ss_pred HHHHhhCCC
Confidence 999998764
No 46
>cd00173 SH2 Src homology 2 domains; Signal transduction, involved in recognition of phosphorylated tyrosine (pTyr). SH2 domains typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.
Probab=99.73 E-value=1.9e-17 Score=148.47 Aligned_cols=90 Identities=44% Similarity=0.788 Sum_probs=79.8
Q ss_pred CccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCCeeeEEEEEEc-CcEEEeC-CcccCCHHHHHHHhhh
Q psy8789 661 EWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAEDKIKHCRIRVE-GRLYTIG-TTQFESLVELISYYER 738 (851)
Q Consensus 661 ~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~~v~H~~I~~~-~~~~~~~-~~~F~sl~eLV~~y~~ 738 (851)
+||||.|+|++||++|++.+ +|+||||.|++.++.|+||++.+++++|++|.+. ++.+... ...|+||.|||+||+.
T Consensus 1 ~w~~g~i~r~~Ae~~L~~~~-~G~FLiR~s~~~~~~~~Lsv~~~~~v~H~~I~~~~~~~~~~~~~~~f~sl~eLv~~y~~ 79 (94)
T cd00173 1 PWYHGPISREEAEELLKKKP-DGTFLVRDSESSPGDYVLSVRVKGKVKHYRIERTDDGYYLLGEGRSFPSLPELIEHYQK 79 (94)
T ss_pred CccccCCCHHHHHHHHhcCC-CceEEEEecCCCCCCEEEEEEECCEEEEEEEEECCCCeEEecCCCccCCHHHHHHHHhh
Confidence 69999999999999999865 9999999999889999999999999999999994 4444444 5699999999999999
Q ss_pred CC--CccceeecCCC
Q psy8789 739 HP--LYKKIELWYPV 751 (851)
Q Consensus 739 ~~--l~~~~~L~~Pv 751 (851)
++ ..+++.|..|+
T Consensus 80 ~~~~~~~~~~L~~p~ 94 (94)
T cd00173 80 NPLSDGLGVKLRYPV 94 (94)
T ss_pred CccCCCcccEeCCcC
Confidence 99 56788888885
No 47
>KOG4226|consensus
Probab=99.71 E-value=4e-17 Score=163.32 Aligned_cols=167 Identities=21% Similarity=0.321 Sum_probs=127.2
Q ss_pred ccccccccccccccccccceeEeecCeEEEEcCccchhhhhhhhhhhcCcccccceeccCCccccccc------------
Q psy8789 420 TPCAIAKDEGKLAEDKIKHCRIRVEGRLYTIGTTQFESLVELISYYERHPLYKKIELWYPVSEDLIQR------------ 487 (851)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~ik~~g~~~~~~~~~F~sL~~li~~w~~~~~~~~~~~~~~~~~~~~~~------------ 487 (851)
||++++ +.++.++.++++ +++++|-+++.- +--..||+.....+..|.+|.++..+-.
T Consensus 193 vVvaLY-sFsssndeELsF---eKGerleivd~P------e~DPdWwkarn~~G~vGLVPrNYv~vl~d~~~ts~~~~~s 262 (379)
T KOG4226|consen 193 VVVALY-SFSSSNDEELSF---EKGERLEIVDKP------ENDPDWWKARNARGQVGLVPRNYVVVLSDGPSTSKALHPS 262 (379)
T ss_pred EEEEEe-cccCCChhhccc---ccCceeEeccCC------CCCchHHhhcccCCccceeecceEEEeccCccccccCCcc
Confidence 566666 344566788887 559999988854 2228899987778888888874433211
Q ss_pred -----cCCCCCCCCCCCCCCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeCCeeeEEEEeeecC
Q psy8789 488 -----MGLGVPNDELHFGEKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQGRVNHCRIRSKPE 562 (851)
Q Consensus 488 -----~~~~~~~~~~~~~~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~ 562 (851)
..+...+.......+||+|.|+ |.+||.+|.. ++.+|.||||+|++++|+|++|++..++-+||++. ..
T Consensus 263 ~~pq~sgn~p~~sg~~ag~~WYyG~it--R~qae~~Ln~--hG~eGdFLiRDSEsnpgD~SvSlka~grNKHFkVq--~~ 336 (379)
T KOG4226|consen 263 HAPQISGNGPSSSGRFAGRPWYYGNIT--RHQAECALNE--HGHEGDFLIRDSESNPGDFSVSLKASGRNKHFKVQ--LV 336 (379)
T ss_pred ccccccCCCCCccccccCCcceecccc--HHHHHHHHhc--cCccCceEEecCCCCCcceeEEeeccCCCcceEEE--Ee
Confidence 1111112233567899999999 9999999977 57899999999999999999999999999999997 34
Q ss_pred CCcEEeccCceecChHHHHHHHhhcCCCC--CcceeEecCCCC
Q psy8789 563 SGQFYLVEKSYFDSLYSLISHYRTNHLRS--QEFLITLQEPVP 603 (851)
Q Consensus 563 ~g~~~~~~~~~F~sl~eLI~~y~~~~l~~--~gl~~~L~~p~~ 603 (851)
++.|+|.. +.|.++.+||+||+..++-+ .|-.+.|..+++
T Consensus 337 d~~ycIGq-RkF~tmd~Lv~HY~kaPIfts~qgEKLyLvr~Lp 378 (379)
T KOG4226|consen 337 DNVYCIGQ-RKFHTMDELVEHYKKAPIFTSEQGEKLYLVRALP 378 (379)
T ss_pred cceEEecc-ceeccHHHHHHhhhcCCceecCCCceEEEeccCC
Confidence 56777764 89999999999999988753 466677777765
No 48
>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []. Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....
Probab=99.71 E-value=2.8e-17 Score=141.70 Aligned_cols=77 Identities=48% Similarity=0.827 Sum_probs=71.4
Q ss_pred ccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeCCeeeEEEEeeecCCCcEEeccCceecChHHHHH
Q psy8789 503 WFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQGRVNHCRIRSKPESGQFYLVEKSYFDSLYSLIS 582 (851)
Q Consensus 503 WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~F~sl~eLI~ 582 (851)
||||.|+ |++||++|.. +.++|+||||.|.+.+|.|+||++.+++++||+|. ..+++.|++.++..|+||.+||+
T Consensus 1 W~~g~is--r~~Ae~~L~~--~~~~G~FLvR~s~~~~~~~~Lsv~~~~~v~h~~I~-~~~~~~~~~~~~~~F~sl~~LV~ 75 (77)
T PF00017_consen 1 WFHGFIS--RQEAERLLMQ--GKPDGTFLVRPSSSKPGKYVLSVRFDGKVKHFRIN-RTENGGYFLSDGKKFPSLSDLVE 75 (77)
T ss_dssp TBEESSH--HHHHHHHHHT--TSSTTEEEEEEESSSTTSEEEEEEETTEEEEEEEE-EETTSEEESSTSSEBSSHHHHHH
T ss_pred CcCCCCC--HHHHHHHHHh--cCCCCeEEEEeccccccccccccccccccEEEEEE-ecCCceEEccCCCcCCCHHHHHH
Confidence 9999999 9999999998 45999999999998999999999999999999998 45666789988889999999999
Q ss_pred HH
Q psy8789 583 HY 584 (851)
Q Consensus 583 ~y 584 (851)
||
T Consensus 76 ~y 77 (77)
T PF00017_consen 76 HY 77 (77)
T ss_dssp HH
T ss_pred hC
Confidence 98
No 49
>KOG4226|consensus
Probab=99.71 E-value=5.2e-17 Score=162.52 Aligned_cols=96 Identities=29% Similarity=0.599 Sum_probs=87.1
Q ss_pred CCCCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCCeeeEEEEEEcCcEEEeCCcccCCHHHHHHHh
Q psy8789 657 HEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAEDKIKHCRIRVEGRLYTIGTTQFESLVELISYY 736 (851)
Q Consensus 657 ~~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~~~~~~F~sl~eLV~~y 736 (851)
.+-.+||.|+|+|.+||-+|-..+.+|.||||+|++.+|+|++|++..++-+||+++...+.|.++.+.|.++.+||+||
T Consensus 278 ~ag~~WYyG~itR~qae~~Ln~hG~eGdFLiRDSEsnpgD~SvSlka~grNKHFkVq~~d~~ycIGqRkF~tmd~Lv~HY 357 (379)
T KOG4226|consen 278 FAGRPWYYGNITRHQAECALNEHGHEGDFLIRDSESNPGDFSVSLKASGRNKHFKVQLVDNVYCIGQRKFHTMDELVEHY 357 (379)
T ss_pred ccCCcceeccccHHHHHHHHhccCccCceEEecCCCCCcceeEEeeccCCCcceEEEEecceEEeccceeccHHHHHHhh
Confidence 66789999999999999999888889999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCc-----cceeecCCCc
Q psy8789 737 ERHPLY-----KKIELWYPVS 752 (851)
Q Consensus 737 ~~~~l~-----~~~~L~~Pv~ 752 (851)
++.++. +..-|..|++
T Consensus 358 ~kaPIfts~qgEKLyLvr~Lp 378 (379)
T KOG4226|consen 358 KKAPIFTSEQGEKLYLVRALP 378 (379)
T ss_pred hcCCceecCCCceEEEeccCC
Confidence 998853 3455666654
No 50
>smart00252 SH2 Src homology 2 domains. Src homology 2 domains bind phosphotyrosine-containing polypeptides via 2 surface pockets. Specificity is provided via interaction with residues that are distinct from the phosphotyrosine. Only a single occurrence of a SH2 domain has been found in S. cerevisiae.
Probab=99.71 E-value=4.8e-17 Score=142.69 Aligned_cols=81 Identities=42% Similarity=0.741 Sum_probs=73.9
Q ss_pred CCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCCeeeEEEEEEcC-cEEEeCC-cccCCHHHHHHHhh
Q psy8789 660 KEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAEDKIKHCRIRVEG-RLYTIGT-TQFESLVELISYYE 737 (851)
Q Consensus 660 ~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~~v~H~~I~~~~-~~~~~~~-~~F~sl~eLV~~y~ 737 (851)
++||||.|+|++||++|.+.+ +|+||||.|++.++.|+||++.++.++|++|.+.+ +.|.+++ ..|+||.+||+||+
T Consensus 1 ~~w~~g~i~r~~Ae~lL~~~~-~G~FLvR~s~~~~~~~~Lsv~~~~~~~h~~I~~~~~~~~~l~~~~~F~sl~eLI~~y~ 79 (84)
T smart00252 1 QPWYHGFISREEAEKLLKNEG-DGDFLVRDSESEPGDYVLSVRVKGKVKHYRIRRNEDGKFYLDGGRKFPSLVELVEHYQ 79 (84)
T ss_pred CCeecccCCHHHHHHHHhcCC-CcEEEEEcCCCCCCCEEEEEEECCEEEEEEEEECCCCcEEECCCCccCCHHHHHHHHh
Confidence 489999999999999999987 99999999998899999999999999999999944 6676666 69999999999999
Q ss_pred hCCC
Q psy8789 738 RHPL 741 (851)
Q Consensus 738 ~~~l 741 (851)
.+++
T Consensus 80 ~~~~ 83 (84)
T smart00252 80 KNSL 83 (84)
T ss_pred hCCC
Confidence 8875
No 51
>cd08590 PI-PLCc_Rv2075c_like Catalytic domain of uncharacterized Mycobacterium tuberculosis Rv2075c-like proteins. This subfamily corresponds to the catalytic domain present in uncharacterized Mycobacterium tuberculosis Rv2075c and its homologs. Members in this family are more closely related to the Streptomyces antibioticus phosphatidylinositol-specific phospholipase C1(SaPLC1)-like proteins rather than the typical bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). In contrast, SaPLC1-like proteins have two Ca2+-chelating amino acid substitutions which convert them to metal-dependent bacterial PI-PLC. Rv2075c and its homologs have the same amino acid substitutions as well, which might suggest they have metal-dependent PI-PLC activity.
Probab=99.70 E-value=3.9e-17 Score=173.11 Aligned_cols=146 Identities=22% Similarity=0.234 Sum_probs=120.7
Q ss_pred ccCcCCccccccccccCCccccCCcc----------ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCcee--
Q psy8789 265 HQDMTKPLSHYFINSSHNTYLTGDQF----------SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTT-- 332 (851)
Q Consensus 265 ~~dm~~pl~~Y~i~sshntyl~~~q~----------~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~-- 332 (851)
..||+.||++|+|-.|||+|..+..- .+..-.-.+...|..|||.+|||||..+ +++.++||.....
T Consensus 3 ~ld~~~pL~~~~~~gTHNS~~s~~~~~~~~~~~~~~~~~nQ~~sI~~QL~~GvR~LdLdv~~~~-~~l~v~Hg~~~~~~~ 81 (267)
T cd08590 3 NLDSNAPLCQAQILGTHNSYNSRAYGYGNRYHGVRYLDPNQELSITDQLDLGARFLELDVHWTT-GDLRLCHGGDHGYLG 81 (267)
T ss_pred CCCCCCchhhceeeeecccccccccccccccccceeeccccCcCHHHHHhhCCcEEEEeeeeCC-CCEEEEccCcccccc
Confidence 47999999999999999999986543 2233344678899999999999999875 7789999987544
Q ss_pred -----eeehHHHHHHHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCC---CCCCCChhhhh--
Q psy8789 333 -----KIKFKDVVKTIRDHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKN---ETVLPSPHQLR-- 402 (851)
Q Consensus 333 -----~i~~~~v~~~i~~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~---~~~lpsp~~l~-- 402 (851)
...|++|++.|+++++....++|||.||+|++..++..+.+.|+++||++||..+.... ...-|+.++++
T Consensus 82 ~~~~~~~~l~d~L~eI~~fL~~nP~EvViL~~e~~~~~~~~~~l~~~l~~~fGd~ly~P~~~~~~~~~~~wpTL~em~~~ 161 (267)
T cd08590 82 VCSSEDRLFEDGLNEIADWLNANPDEVVILYLEDHGDGGKDDELNALLNDAFGDLLYTPSDCDDLQGLPNWPTKEDMLNS 161 (267)
T ss_pred ccccccchHHHHHHHHHHHHHhCCCCcEEEEEecCCCcccHHHHHHHHHHHhCCeEEcCCcccccccCCCCCCHHHHHhC
Confidence 56899999999999999999999999999999887889999999999999998543221 45789999996
Q ss_pred ccccccccc
Q psy8789 403 GKILLKHKK 411 (851)
Q Consensus 403 ~kilik~k~ 411 (851)
||.||---.
T Consensus 162 GkrViv~~~ 170 (267)
T cd08590 162 GKQVVLATG 170 (267)
T ss_pred CCEEEEEeC
Confidence 666655443
No 52
>PF00017 SH2: SH2 domain; InterPro: IPR000980 The Src homology 2 (SH2) domain is a protein domain of about 100 amino-acid residues first identified as a conserved sequence region between the oncoproteins Src and Fps []. Similar sequences were later found in many other intracellular signal-transducing proteins []. SH2 domains function as regulatory modules of intracellular signalling cascades by interacting with high affinity to phosphotyrosine-containing target peptides in a sequence-specific, SH2 domains recognise between 3-6 residues C-terminal to the phosphorylated tyrosine in a fashion that differs from one SH2 domain to another, and strictly phosphorylation-dependent manner [, , , ]. They are found in a wide variety of protein contexts e.g., in association with catalytic domains of phospholipase Cy (PLCy) and the non-receptor protein tyrosine kinases; within structural proteins such as fodrin and tensin; and in a group of small adaptor molecules, i.e Crk and Nck. The domains are frequently found as repeats in a single protein sequence and will then often bind both mono- and di-phosphorylated substrates. The structure of the SH2 domain belongs to the alpha+beta class, its overall shape forming a compact flattened hemisphere. The core structural elements comprise a central hydrophobic anti-parallel beta-sheet, flanked by 2 short alpha-helices. The loop between strands 2 and 3 provides many of the binding interactions with the phosphate group of its phosphopeptide ligand, and is hence designated the phosphate binding loop, the phosphorylated ligand binds perpendicular to the beta-sheet and typically interacts with the phosphate binding loop and a hydrophobic binding pocket that interacts with a pY+3 side chain. The N- and C-termini of the domain are close together in space and on the opposite face from the phosphopeptide binding surface and it has been speculated that this has facilitated their integration into surface-exposed regions of host proteins [].; GO: 0005515 protein binding; PDB: 1M27_A 1KA6_A 1D4W_B 1D4T_A 1D1Z_B 1KA7_A 1UUR_A 1UUS_A 1BLJ_A 1BLK_A ....
Probab=99.67 E-value=1.6e-16 Score=136.98 Aligned_cols=75 Identities=40% Similarity=0.697 Sum_probs=66.8
Q ss_pred ccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCCeeeEEEEEE-cCc-EEEeCCcccCCHHHHHHHh
Q psy8789 662 WYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAEDKIKHCRIRV-EGR-LYTIGTTQFESLVELISYY 736 (851)
Q Consensus 662 Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~~v~H~~I~~-~~~-~~~~~~~~F~sl~eLV~~y 736 (851)
||||.|+|++||++|++...+|+||||.|.+.+|.|+||++.++++.|++|.+ .++ .+...+..|+||.+||+||
T Consensus 1 W~~g~isr~~Ae~~L~~~~~~G~FLvR~s~~~~~~~~Lsv~~~~~v~h~~I~~~~~~~~~~~~~~~F~sl~~LV~~y 77 (77)
T PF00017_consen 1 WFHGFISRQEAERLLMQGKPDGTFLVRPSSSKPGKYVLSVRFDGKVKHFRINRTENGGYFLSDGKKFPSLSDLVEHY 77 (77)
T ss_dssp TBEESSHHHHHHHHHHTTSSTTEEEEEEESSSTTSEEEEEEETTEEEEEEEEEETTSEEESSTSSEBSSHHHHHHHH
T ss_pred CcCCCCCHHHHHHHHHhcCCCCeEEEEeccccccccccccccccccEEEEEEecCCceEEccCCCcCCCHHHHHHhC
Confidence 99999999999999999335999999999988999999999999999999999 444 4444556999999999998
No 53
>KOG4278|consensus
Probab=99.66 E-value=1.7e-16 Score=175.47 Aligned_cols=121 Identities=31% Similarity=0.540 Sum_probs=107.7
Q ss_pred CCCceeeecCCCCCCCCCC---CCCCCCCCCCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCCeee
Q psy8789 632 SDGAFLVRPSENDNSSYEP---VPQPNQHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAEDKIK 708 (851)
Q Consensus 632 ~dG~flvr~~~~~~~~~~p---~~~~~~~~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~~v~ 708 (851)
.+|.|-..+..+|. |+|| +++..+++...||||.+||..||.+|...- .|+||||+|++.+|+|+||++++|+|+
T Consensus 122 ~NgEWcEartKNGq-GWVPSNyItPvNSLeKhsWYHGpvSRsaaEy~LsSgI-nGSFLVRESEsSpgQ~sISlRyeGRVy 199 (1157)
T KOG4278|consen 122 KNGEWCEARTKNGQ-GWVPSNYITPVNSLEKHSWYHGPVSRSAAEYILSSGI-NGSFLVRESESSPGQYSISLRYEGRVY 199 (1157)
T ss_pred CCCcceeecccCCC-ccccccccccccchhhcccccCccccchhhhhhhcCc-ccceEEeeccCCCcceeEEEEecceEE
Confidence 45666554444544 9999 588999999999999999999999998765 999999999999999999999999999
Q ss_pred EEEEEE--cCcEEEeCCcccCCHHHHHHHhhhCCCccceeecCCCcHh
Q psy8789 709 HCRIRV--EGRLYTIGTTQFESLVELISYYERHPLYKKIELWYPVSED 754 (851)
Q Consensus 709 H~~I~~--~~~~~~~~~~~F~sl~eLV~~y~~~~l~~~~~L~~Pv~~~ 754 (851)
||+|.. +|..|+-....|.||.|||+||+..+.++.++|.||.+..
T Consensus 200 HYRINt~~dgK~yvt~EsrF~TLaELVHHHStvADGLittLhYPApK~ 247 (1157)
T KOG4278|consen 200 HYRINTDNDGKMYVTQESRFRTLAELVHHHSTVADGLITTLHYPAPKK 247 (1157)
T ss_pred EEEeeccCCccEEEeehhhhhHHHHHHhhccccccceeEeeeccCccC
Confidence 999998 5678888888999999999999999999999999999864
No 54
>KOG2996|consensus
Probab=99.55 E-value=5.2e-15 Score=161.66 Aligned_cols=135 Identities=24% Similarity=0.357 Sum_probs=110.9
Q ss_pred hhhhcC-cccccceeccCCccccc----cccCCCCCCCCCCCCCCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCC
Q psy8789 463 SYYERH-PLYKKIELWYPVSEDLI----QRMGLGVPNDELHFGEKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESET 537 (851)
Q Consensus 463 ~~w~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~ 537 (851)
+.||.. +..+...|++|++..-+ +++..++ .......+||.|.|. |+.||..|++. ++|+||||.+..
T Consensus 644 s~~w~gr~~~sr~sg~fpss~vkp~~~vpr~~~~~--~~d~s~~~WyaG~ME--Raqaes~Lk~~---~ngT~LVR~r~k 716 (865)
T KOG2996|consen 644 SSWWEGRNHGSRESGNFPSSTVKPCPSVPRQQDYV--PTDYSEFPWYAGEME--RAQAESTLKNR---PNGTYLVRYRTK 716 (865)
T ss_pred CcccccCCccCCccCCCCccccCcCCCCCCCCCCC--ccchhhhhhhcchHh--hhhhhhHhhcC---CCceEEEEeccc
Confidence 788887 77778889999742221 1111111 234556799999999 99999999985 899999999988
Q ss_pred CCCcEEEEEEeCCeeeEEEEeeecCCCcEEeccCceecChHHHHHHHhhcCCCC--CcceeEecCCCCCCC
Q psy8789 538 FIGDYSLSFWWQGRVNHCRIRSKPESGQFYLVEKSYFDSLYSLISHYRTNHLRS--QEFLITLQEPVPQPN 606 (851)
Q Consensus 538 ~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~F~sl~eLI~~y~~~~l~~--~gl~~~L~~p~~~~~ 606 (851)
..+.|++|+.+++.|+|.+|.. .+|.++|.+...|+|+.|||+||++++|.. ..|.+.|+.|...|.
T Consensus 717 ea~e~AISikynnevKHikI~~--~dg~~~i~E~k~F~sl~ELVeyYq~~sLke~Fk~LDTtLk~Pyke~e 785 (865)
T KOG2996|consen 717 EAKEFAISIKYNNEVKHIKIET--NDGKVHITEDKKFNSLVELVEYYQSHSLKEIFKALDTTLKFPYKEPE 785 (865)
T ss_pred chhheeEEEEeccccceEEEEe--cCCeEEechhhhhhhHHHHHHHHHhccHHHHHHHhhhhhcCCCcChh
Confidence 8899999999999999999973 479999999999999999999999999873 567899999998654
No 55
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.54 E-value=6.5e-15 Score=137.05 Aligned_cols=83 Identities=35% Similarity=0.524 Sum_probs=68.3
Q ss_pred CCCCcccc-ccCc-ccCeEEceeehhhhcCCCccccccCccccc-CCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHH
Q psy8789 15 PEGSDEQT-PCAI-AKDEVDMREVKEVRVGKCFKDFDRWPEESG-RVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWV 91 (851)
Q Consensus 15 ~~~~~~~~-~~~k-~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~-~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv 91 (851)
|+|..-++ ++++ .++.|+|++|+|||+|+.+++|++...... ...+++|||||||.++++++|||||+|+++|+.|+
T Consensus 30 ~~~~~l~W~~~~~~~~~~l~i~~IkeIR~G~~~k~~~~~~~~~~~~~~e~~~fTIiy~~~~~~k~L~lVA~s~~~a~~W~ 109 (115)
T cd01248 30 EKGFFLYWKDEGKKEKKVLDISSIKEIRTGKQPKDLKLRAELNQGNSLEERCFTIVYGTDLNLKSLDLVAPSEEEAKTWV 109 (115)
T ss_pred CCCcEEEEeCCCCccccEEEehhhhhhhCCCCCcchHHhhhhhcCCCccccEEEEEECCCCCeeEEEEEECCHHHHHHHH
Confidence 34554444 3344 678999999999999999999998655432 14689999999999888999999999999999999
Q ss_pred HHHHHH
Q psy8789 92 TGLRYL 97 (851)
Q Consensus 92 ~gL~~L 97 (851)
+||++|
T Consensus 110 ~gL~~L 115 (115)
T cd01248 110 SGLRKL 115 (115)
T ss_pred HHHhhC
Confidence 999875
No 56
>KOG4637|consensus
Probab=99.51 E-value=2.1e-14 Score=149.72 Aligned_cols=103 Identities=31% Similarity=0.526 Sum_probs=91.6
Q ss_pred CCCCCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCCeeeEEEEEEcCcEEEeCCc-ccCCHHHHHH
Q psy8789 656 QHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAEDKIKHCRIRVEGRLYTIGTT-QFESLVELIS 734 (851)
Q Consensus 656 ~~~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~~~~~-~F~sl~eLV~ 734 (851)
.+...+||||.|||+++...|+..+ +|+||||+-.+.+|.|+||++.++.++-++|...+++|-+.++ .|.|+.+||+
T Consensus 19 ~L~~a~WYWgdisReev~~~L~d~P-DGsFlVRdAstm~GdYTLtl~k~g~~KLikI~h~DgKyGF~d~ltf~SVVelIn 97 (464)
T KOG4637|consen 19 ELQDAEWYWGDISREEVNKKLRDQP-DGSFLVRDASTMQGDYTLTLRKGGNNKLIKIVHRDGKYGFSDPLTFNSVVELIN 97 (464)
T ss_pred hhhhccccccccCHHHHHHHhcCCC-CCcEEeeccccCCCceEEEEecCCccceeeeEEecCccCCCCchhhHHHHHHHH
Confidence 3777899999999999999999999 9999999988889999999999999999999997776766666 9999999999
Q ss_pred HhhhCCCc-----cceeecCCCcHhHHhhc
Q psy8789 735 YYERHPLY-----KKIELWYPVSEDLIQRM 759 (851)
Q Consensus 735 ~y~~~~l~-----~~~~L~~Pv~~~~~~~~ 759 (851)
||+..++. +.++|.+||.+-+.++.
T Consensus 98 ~yr~~SL~~yN~~LDvrLlyPVs~~r~dq~ 127 (464)
T KOG4637|consen 98 HYRNESLAQYNPKLDVRLLYPVSRYRQDQN 127 (464)
T ss_pred HHhhhHHHhhCcccceeeechHHHhhhccc
Confidence 99999865 48999999998664443
No 57
>cd08557 PI-PLCc_bacteria_like Catalytic domain of bacterial phosphatidylinositol-specific phospholipase C and similar proteins. This subfamily corresponds to the catalytic domain present in bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and their sequence homologs found in eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Its catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. Eukaryotic homologs in this family are named as phosphatidylinositol-specific phospholipase C X
Probab=99.51 E-value=2.5e-14 Score=154.09 Aligned_cols=146 Identities=25% Similarity=0.271 Sum_probs=125.0
Q ss_pred cCcCCccccccccccCCccccCCccc-------cCCCHHHHHHHHhcCccEEEEeeecCC-CCCceEeecCCceeeeehH
Q psy8789 266 QDMTKPLSHYFINSSHNTYLTGDQFS-------SESSCEAYVRCLRQGCRCIELDCWDGP-DGTPIVYHGHTLTTKIKFK 337 (851)
Q Consensus 266 ~dm~~pl~~Y~i~sshntyl~~~q~~-------~~ss~~~y~~~l~~gcRcveld~wdg~-~~~p~v~hg~t~t~~i~~~ 337 (851)
.+.+.||+++.|-.|||+|..+.... +......+...|..|+|++|||||... +++..|+||.......+|.
T Consensus 3 ~~~~~~l~~~~ipGtHnS~~~~~~~~~~~~~~~~~~Q~~~i~~QL~~GiR~~dlr~~~~~~~~~~~~~H~~~~~~~~~~~ 82 (271)
T cd08557 3 LLDDLPLSQLSIPGTHNSYAYTIDGNSPIVSKWSKTQDLSITDQLDAGVRYLDLRVAYDPDDGDLYVCHGLFLLNGQTLE 82 (271)
T ss_pred ccccCchhcccccccchhceeccCCCchhhhhHHhccCCCHHHHHhcCceEEEEEeeeecCCCcEEEEccccccCcccHH
Confidence 35789999999999999998876642 233334667899999999999999875 6789999998777789999
Q ss_pred HHHHHHhhcccccCCCceEEEeccCCCHHH---HHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhh-cccccccccCC
Q psy8789 338 DVVKTIRDHAFETSKYPVILSIEDNCSLPQ---QRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLR-GKILLKHKKLP 413 (851)
Q Consensus 338 ~v~~~i~~~af~~s~yP~ils~e~hc~~~~---q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~-~kilik~k~~~ 413 (851)
||++.|+++.......+|||+||.+++... +..++++|+++||+.++..+ ......|++++|+ ||++|-.....
T Consensus 83 ~vL~~i~~fl~~~p~E~vil~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~ptL~el~~gK~vi~~~~~~ 160 (271)
T cd08557 83 DVLNEVKDFLDAHPSEVVILDLEHEYGGDNGEDHDELDALLRDVLGDPLYRPP--VRAGGWPTLGELRAGKRVLLFYFGG 160 (271)
T ss_pred HHHHHHHHHHHHCCCcEEEEEEEccCCCcchhhHHHHHHHHHHHhCccccCCc--cccCCCCcHHHHhcCCeEEEEECCC
Confidence 999999999999999999999999998775 89999999999999999754 3456789999999 99999876544
No 58
>KOG0027|consensus
Probab=99.46 E-value=5.8e-13 Score=130.39 Aligned_cols=132 Identities=17% Similarity=0.334 Sum_probs=113.3
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcccc-------cccc
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQ-------MFTD 185 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~-------~~~~ 185 (851)
++++|..+|+++ |.|+.+|+..+++.++..++.+++..+++++|.+++|.|+|+||+.++........ ....
T Consensus 10 l~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~e 89 (151)
T KOG0027|consen 10 LKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEELKE 89 (151)
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHHHHH
Confidence 578999999999 99999999999999999999999999999999999999999999999887543211 1123
Q ss_pred ccc-cccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhCc
Q psy8789 186 SYS-HYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFSK 252 (851)
Q Consensus 186 ~f~-~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S~ 252 (851)
.|. .+.++.|+||++||+++|...+ ...+++++..+|+.++.+++ |.++|++|+.+|...
T Consensus 90 aF~~fD~d~~G~Is~~el~~~l~~lg--~~~~~~e~~~mi~~~d~d~d-----g~i~f~ef~~~m~~~ 150 (151)
T KOG0027|consen 90 AFRVFDKDGDGFISASELKKVLTSLG--EKLTDEECKEMIREVDVDGD-----GKVNFEEFVKMMSGK 150 (151)
T ss_pred HHHHHccCCCCcCcHHHHHHHHHHhC--CcCCHHHHHHHHHhcCCCCC-----CeEeHHHHHHHHhcC
Confidence 454 5667788999999999999876 34678899999999998777 889999999998753
No 59
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.44 E-value=1.4e-12 Score=125.70 Aligned_cols=137 Identities=13% Similarity=0.276 Sum_probs=116.9
Q ss_pred hhhHHHHHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcccccc--
Q psy8789 107 PLNVERWLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQMF-- 183 (851)
Q Consensus 107 ~~~~~~wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~-- 183 (851)
..++.+| +++|..+|.++ |.|+..++.++++.+|.+.+++++..+|.++|. +.+.|+|++|+.+|.....+....
T Consensus 16 ~~qi~~l-keaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Ee 93 (160)
T COG5126 16 EEQIQEL-KEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEE 93 (160)
T ss_pred HHHHHHH-HHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHH
Confidence 3445566 78999999999 999999999999999999999999999999999 899999999999998766543322
Q ss_pred -ccccc-cccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhCc
Q psy8789 184 -TDSYS-HYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFSK 252 (851)
Q Consensus 184 -~~~f~-~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S~ 252 (851)
...|. .+.+++|+|+..+|++.|+..+ ...++++++++++.++.+++ |.|++++|...++..
T Consensus 94 l~~aF~~fD~d~dG~Is~~eL~~vl~~lg--e~~~deev~~ll~~~d~d~d-----G~i~~~eF~~~~~~~ 157 (160)
T COG5126 94 LREAFKLFDKDHDGYISIGELRRVLKSLG--ERLSDEEVEKLLKEYDEDGD-----GEIDYEEFKKLIKDS 157 (160)
T ss_pred HHHHHHHhCCCCCceecHHHHHHHHHhhc--ccCCHHHHHHHHHhcCCCCC-----ceEeHHHHHHHHhcc
Confidence 24455 5677888999999999999765 56788999999999998877 899999999987754
No 60
>KOG0197|consensus
Probab=99.42 E-value=2.2e-13 Score=151.33 Aligned_cols=119 Identities=33% Similarity=0.485 Sum_probs=98.7
Q ss_pred ceeeecCCCCCCCCCCC---C------CCCCCCCCCccCCCCCHHHHHHHhc-CCCCCCeEEEeecCCCCCceEEEEEeC
Q psy8789 635 AFLVRPSENDNSSYEPV---P------QPNQHEDKEWYHPTATRSQAEDLLR-RVPSDGAFLVRPSENDNSSYVISFRAE 704 (851)
Q Consensus 635 ~flvr~~~~~~~~~~p~---~------~~~~~~~~~Wyhg~isR~eAe~lL~-~~~~~G~FLVR~s~~~~~~~~LSv~~~ 704 (851)
||.+|....+..|++|. + +...++.++||+|.|+|++||+.|. .....|+||||+|++.+|.|+|||+..
T Consensus 47 Ww~ar~~~~~~~g~ip~N~v~~~~~~~~~~~l~~~~Wf~~~isR~~ae~~ll~p~~~~G~flvR~se~~~g~yslsv~~~ 126 (468)
T KOG0197|consen 47 WWRARSLQLGQEGYIPSNYVARNRGSPAFIKLSDEPWFFGKISREEAERQLLAPENKEGAFLVRESESDKGDYSLSVREG 126 (468)
T ss_pred HHHHHHhhcCCCCcCcCceeeccccCCCccccccCCchhccccHHHHHHhhcCCCCCccceeeecccCCcCCeeEEEEec
Confidence 44556666777888882 3 3478999999999999999996554 444689999999999999999999986
Q ss_pred C------eeeEEEEEE-cCcEEE--eCCc-ccCCHHHHHHHhhhCCCccceeecCCCcH
Q psy8789 705 D------KIKHCRIRV-EGRLYT--IGTT-QFESLVELISYYERHPLYKKIELWYPVSE 753 (851)
Q Consensus 705 ~------~v~H~~I~~-~~~~~~--~~~~-~F~sl~eLV~~y~~~~l~~~~~L~~Pv~~ 753 (851)
. .|+||+|.+ +++.+. +... .|++|.+||+||+.++.++++.|..|+..
T Consensus 127 ~~~~~~~~v~hyri~~~~~~~~~~~~~~~~~F~~l~~lv~~~~~~~~gl~~~l~~p~~~ 185 (468)
T KOG0197|consen 127 DSGGLGAKVKHYRIRQLDGGGLYPYIDERELFSSLQQLVNYYSKNADGLCTRLRDPCSK 185 (468)
T ss_pred cccCCccceeeeeeeEcCCCCeecCCCHHHhhhhHHHHHhhhhccCcchhhcccCchhc
Confidence 6 899999999 554343 4444 99999999999999999999999999975
No 61
>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A ....
Probab=99.33 E-value=1e-12 Score=102.19 Aligned_cols=49 Identities=47% Similarity=0.990 Sum_probs=43.7
Q ss_pred EEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCcc
Q psy8789 789 ALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVA 838 (851)
Q Consensus 789 al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~ 838 (851)
|+|+|.++.++||+|++||+|.|+.+.++|||.|+..|.. |+||+|||+
T Consensus 1 Al~~y~~~~~dELs~~~Gd~i~v~~~~~~~W~~g~~~g~~-G~~P~~yV~ 49 (49)
T PF14604_consen 1 ALYDYEAQDPDELSFKKGDVITVLEKSDDGWWYGRNTGRT-GLFPANYVE 49 (49)
T ss_dssp ESSCBCSSSTTB-EB-TTEEEEEEEESSTSEEEEEETTEE-EEEEGGGEE
T ss_pred CCccCCCCCcCEeeEcCCCEEEEEEeCCCCEEEEEECCEE-EEECHHhCC
Confidence 6899999999999999999999999999999999996655 999999995
No 62
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=99.22 E-value=8.6e-12 Score=109.04 Aligned_cols=79 Identities=30% Similarity=0.500 Sum_probs=65.8
Q ss_pred ccccccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhCcCcchhhhhccccc
Q psy8789 186 SYSHYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFSKQNELWDQQYDAIH 265 (851)
Q Consensus 186 ~f~~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S~~n~~~~~~~~~~~ 265 (851)
.|..++.+++.||.++|++||+++|++..++.++|.++|.+|+++.. ...++.||++||++||+|++|++|+|.|..||
T Consensus 5 if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~-~~~~~~lt~~gF~~fL~S~~N~~~~~~~~~Vy 83 (83)
T PF09279_consen 5 IFRKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDER-NRQKGQLTLEGFTRFLFSDENSIFDPEHLQVY 83 (83)
T ss_dssp HHHHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHH-HHCTTEEEHHHHHHHHHSTTCBSS-HHHHSS-
T ss_pred HHHHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchh-hcccCCcCHHHHHHHHCCCcCCCCChHhCCcC
Confidence 34456667789999999999999999988899999999999987652 12348999999999999999999999998875
No 63
>KOG0028|consensus
Probab=99.19 E-value=2e-10 Score=108.13 Aligned_cols=134 Identities=10% Similarity=0.209 Sum_probs=112.7
Q ss_pred HHHHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhh-ccccccc--cc
Q psy8789 111 ERWLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIM-FDEQMFT--DS 186 (851)
Q Consensus 111 ~~wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~-~r~~~~~--~~ 186 (851)
.+=++..|..+|.++ |.|+++|++..++.+|+.+.+.++..++.++|.++.|.|+|++|...+...+ .+...++ -.
T Consensus 32 ~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~a 111 (172)
T KOG0028|consen 32 KQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKA 111 (172)
T ss_pred HhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHH
Confidence 456788999999999 9999999999999999999999999999999999999999999999876433 3322222 22
Q ss_pred cc-cccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhC
Q psy8789 187 YS-HYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFS 251 (851)
Q Consensus 187 f~-~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S 251 (851)
|. ++.++.|.|+..+|+...++.+ +.++++++.++|.+++.+.+ |.|+-++|+.+|.+
T Consensus 112 frl~D~D~~Gkis~~~lkrvakeLg--enltD~El~eMIeEAd~d~d-----gevneeEF~~imk~ 170 (172)
T KOG0028|consen 112 FRLFDDDKTGKISQRNLKRVAKELG--ENLTDEELMEMIEEADRDGD-----GEVNEEEFIRIMKK 170 (172)
T ss_pred HHcccccCCCCcCHHHHHHHHHHhC--ccccHHHHHHHHHHhccccc-----ccccHHHHHHHHhc
Confidence 43 5666778899999999998876 56899999999999998887 78999999988753
No 64
>cd08555 PI-PLCc_GDPD_SF Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily. The PI-PLC-like phosphodiesterases superfamily represents the catalytic domains of bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11), glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria, as well as their uncharacterized homologs found in organisms ranging from bacteria and archaea to metazoans, plants, and fungi. PI-PLCs are ubiquitous enzymes hydrolyzing the membrane lipid phosphoinositides to yield two important second messengers, inositol phosphates and diacylglycerol (DAG). GP-GDEs play essential roles in glycerol metabolism and catalyze the hydrolysis of glycerophosph
Probab=99.19 E-value=5e-11 Score=120.13 Aligned_cols=97 Identities=32% Similarity=0.422 Sum_probs=85.2
Q ss_pred ccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce------eeeehHHHHHHHhhcccccCC
Q psy8789 279 SSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT------TKIKFKDVVKTIRDHAFETSK 352 (851)
Q Consensus 279 sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t------~~i~~~~v~~~i~~~af~~s~ 352 (851)
.+|+-|-...+ +.|..+|..|+..|||.||+|||-..||+|||+|+.++. .-.+|.+|+..++++++ .+.
T Consensus 2 iaHRG~~~~~p---eNT~~af~~a~~~G~~~iE~DV~lt~Dg~lvv~HD~~~~r~~~~~~~ptl~evl~~~~~~~~-~~~ 77 (179)
T cd08555 2 LSHRGYSQNGQ---ENTLEAFYRALDAGARGLELDVRLTKDGELVVYHGPTLDRTTAGILPPTLEEVLELIADYLK-NPD 77 (179)
T ss_pred EecCCCCCCCC---ccHHHHHHHHHHcCCCEEEEEEeEcCCCeEEEECCCccccccCCCCCCCHHHHHHHHHhhhh-cCC
Confidence 37888765544 889999999999999999999999999999999999986 56899999999999999 888
Q ss_pred CceEEEeccCCCH----HHHHHHHHHHHHHh
Q psy8789 353 YPVILSIEDNCSL----PQQRVMAQIMLDIF 379 (851)
Q Consensus 353 yP~ils~e~hc~~----~~q~~~a~~~~~~~ 379 (851)
+|++|.||.+++. .++.++++.+++..
T Consensus 78 ~~~~l~iEiK~~~~~~~~~~~~~~~~~~~~~ 108 (179)
T cd08555 78 YTIILSLEIKQDSPEYDEFLAKVLKELRVYF 108 (179)
T ss_pred CceEEEEEeCCCCCcchHHHHHHHHHHHHcC
Confidence 9999999999964 56677777777654
No 65
>PTZ00183 centrin; Provisional
Probab=99.17 E-value=3.8e-10 Score=110.90 Aligned_cols=133 Identities=11% Similarity=0.230 Sum_probs=109.3
Q ss_pred HHHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhccc---ccccccc
Q psy8789 112 RWLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDE---QMFTDSY 187 (851)
Q Consensus 112 ~wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~---~~~~~~f 187 (851)
.+++..|..+|.++ |.|+..|+..+++.++...+...+..+|..+|.+++|.|+|+||..++....... +.....|
T Consensus 17 ~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F 96 (158)
T PTZ00183 17 KEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAF 96 (158)
T ss_pred HHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 46688999999999 9999999999999999888888999999999999999999999998876543211 1112334
Q ss_pred c-cccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhC
Q psy8789 188 S-HYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFS 251 (851)
Q Consensus 188 ~-~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S 251 (851)
. .+.++.+.|+.+||..+|...+ ..++++++..++..++.+++ |.|++++|..+|.+
T Consensus 97 ~~~D~~~~G~i~~~e~~~~l~~~~--~~l~~~~~~~~~~~~d~~~~-----g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 97 RLFDDDKTGKISLKNLKRVAKELG--ETITDEELQEMIDEADRNGD-----GEISEEEFYRIMKK 154 (158)
T ss_pred HHhCCCCCCcCcHHHHHHHHHHhC--CCCCHHHHHHHHHHhCCCCC-----CcCcHHHHHHHHhc
Confidence 4 4566778899999999998765 44788899999999987765 88999999998865
No 66
>PTZ00184 calmodulin; Provisional
Probab=99.14 E-value=5e-10 Score=108.66 Aligned_cols=132 Identities=20% Similarity=0.359 Sum_probs=107.2
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhccc---cccccccc-
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDE---QMFTDSYS- 188 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~---~~~~~~f~- 188 (851)
++..|..+|.++ |.|+..|+..++..++...+...+..+|..+|.+++|.|+|++|+.++....... +.....|.
T Consensus 13 ~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~ 92 (149)
T PTZ00184 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKV 92 (149)
T ss_pred HHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHh
Confidence 467899999999 9999999999999999888888999999999999999999999999876543211 11123344
Q ss_pred cccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhCc
Q psy8789 189 HYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFSK 252 (851)
Q Consensus 189 ~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S~ 252 (851)
.+.++.+.|+.++|..+|...+ ...+.+++..++..++.+++ |.|++++|+.+|.+.
T Consensus 93 ~D~~~~g~i~~~e~~~~l~~~~--~~~~~~~~~~~~~~~d~~~~-----g~i~~~ef~~~~~~~ 149 (149)
T PTZ00184 93 FDRDGNGFISAAELRHVMTNLG--EKLTDEEVDEMIREADVDGD-----GQINYEEFVKMMMSK 149 (149)
T ss_pred hCCCCCCeEeHHHHHHHHHHHC--CCCCHHHHHHHHHhcCCCCC-----CcCcHHHHHHHHhcC
Confidence 4456677899999999998764 34677889999999987665 789999999998763
No 67
>KOG2070|consensus
Probab=99.13 E-value=4e-11 Score=129.61 Aligned_cols=61 Identities=44% Similarity=0.959 Sum_probs=57.0
Q ss_pred CceEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCccccCCCC
Q psy8789 783 ASITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEIEPQH 844 (851)
Q Consensus 783 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i~~~~ 844 (851)
.+..++|-|+|.+.+.|||+|.+||+|+|....++|||+|.++|+. ||||+|||.+++.+.
T Consensus 16 ~pLvvrAkf~F~gsNnDELsf~KgDvItVTq~eeGGWWEGTlng~T-GWFPsnYV~eik~e~ 76 (661)
T KOG2070|consen 16 NPLVVRAKFNFQGSNNDELSFSKGDVITVTQVEEGGWWEGTLNGRT-GWFPSNYVREIKSEK 76 (661)
T ss_pred CceEEEEEeecccCCCceeccccCCEEEEEEeccCcceeccccCcc-CccchHHHHHHhhcC
Confidence 4568999999999999999999999999999999999999999998 999999999998543
No 68
>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....
Probab=99.12 E-value=5.2e-11 Score=95.33 Aligned_cols=54 Identities=46% Similarity=1.012 Sum_probs=47.3
Q ss_pred EEEEEEeecCCCCCCcccCCCCEEEEe-EecCCCeEEEEECCceEEEecCCCcccc
Q psy8789 786 TVKALYDYQARNDDELSFPKHAIISNV-TRAEGGWWRGDYGGKRMHWFPSNYVAEI 840 (851)
Q Consensus 786 ~~~al~dy~~~~~~eLs~~~Gd~i~vl-~~~~~gWw~g~~~g~~~G~fP~nyv~~i 840 (851)
.++|++||.++.+++|+|++||+|.|+ ++.++|||.|+.+|.. ||||++||+++
T Consensus 1 ~~~a~~d~~~~~~~~Ls~~~Gd~i~v~~~~~~~~ww~~~~~g~~-G~~P~~~v~~~ 55 (55)
T PF07653_consen 1 YYRAIFDYVAEDPDELSFKKGDVIEVLGEKDDDGWWLGENNGRR-GWFPSSYVEEI 55 (55)
T ss_dssp EEEESSSBESSSTTB-EB-TTEEEEEEEEECSTSEEEEEETTEE-EEEEGGGEEEH
T ss_pred CEEEeEEECCCCCCceEEecCCEEEEEEeecCCCEEEEEECCcE-EEEcHHHEEEC
Confidence 478999999999999999999999999 8888899999996665 99999999864
No 69
>KOG0194|consensus
Probab=99.11 E-value=2e-10 Score=129.80 Aligned_cols=119 Identities=30% Similarity=0.554 Sum_probs=94.1
Q ss_pred CCCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCc---E-EEEEEeC--CeeeEEEEeeecCCCcEEeccCce
Q psy8789 500 GEKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGD---Y-SLSFWWQ--GRVNHCRIRSKPESGQFYLVEKSY 573 (851)
Q Consensus 500 ~~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~---y-~LSv~~~--~~v~H~~I~~~~~~g~~~~~~~~~ 573 (851)
.++||||-+. |++|+.+|.. +|+||||.|+..+|. + +||+.+. ..++||.|+. .+ +.|+......
T Consensus 48 ~~~~yHG~l~--red~~~lL~~-----~GDfLvR~s~~~~~~~~~~~vlSv~~~~~~~~~h~vi~~-~~-~~~~~~~~~~ 118 (474)
T KOG0194|consen 48 ELPYYHGLLP--REDAEKLLKN-----DGDFLVRASEPKEGEKREFVVLSVKWSVFKKIKHYVIKR-NG-NLFFFEGLRK 118 (474)
T ss_pred cCcccccccc--HhHHHHHhCC-----CCceEEEeecccCCcceeEEEEEEEeecCCceeEEEEEE-cC-CeeEEecccc
Confidence 3799999999 9999999986 899999999887664 3 9999985 7899999983 33 4777877899
Q ss_pred ecChHHHHHHHhhcCCCCCcceeEecCCCCCCCCccccccccccccchhhhhhhhcccCCCceee
Q psy8789 574 FDSLYSLISHYRTNHLRSQEFLITLQEPVPQPNQHEDKEWYHPTATRSQAEDLLRRVPSDGAFLV 638 (851)
Q Consensus 574 F~sl~eLI~~y~~~~l~~~gl~~~L~~p~~~~~~~~~~~~~~~~l~~~~ae~~l~~v~~dG~flv 638 (851)
|+|+.+||.||+.+.+...+....|..|++++ .| ........+....++|+|..
T Consensus 119 F~si~~li~~~~~~~~~~~~~~~~L~~PI~r~------~W-----el~H~~v~l~kkLGeGaFGe 172 (474)
T KOG0194|consen 119 FPTISELVNYYKFSKLEITGKNFFLKRPIPRQ------KW-----ELSHSDIELGKKLGEGAFGE 172 (474)
T ss_pred CCcHHHHHHHHHhcccceeccceeeccccccc------cc-----EEeccCccccceeecccccE
Confidence 99999999999999877666667899999874 24 22222223446788999873
No 70
>KOG3601|consensus
Probab=99.05 E-value=5.1e-11 Score=116.96 Aligned_cols=127 Identities=28% Similarity=0.442 Sum_probs=100.9
Q ss_pred cccccceeEeecCeEEEEcCccchhhhhhhhhhhcCcccccceeccCCccccccccCCCCCCCCCCCCCCccCCCCCCCH
Q psy8789 433 EDKIKHCRIRVEGRLYTIGTTQFESLVELISYYERHPLYKKIELWYPVSEDLIQRMGLGVPNDELHFGEKWFHGRLSGGR 512 (851)
Q Consensus 433 ~~~~~~~~ik~~g~~~~~~~~~F~sL~~li~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WyhG~is~~R 512 (851)
.+|+++ .| ++.+.+.+.. |. ..|.++ .+-+..+++|+ +..+ ...++||+|.|+ |
T Consensus 14 ~dELsF--lk-g~~lk~l~~~------d~-~nw~~a-el~g~~g~~P~---------Nai~----~~~~~wve~~i~--r 67 (222)
T KOG3601|consen 14 RDELSF--LK-GDNLKILNME------DD-INWYKA-ELDGPEGFIPK---------NAIR----MKPHEWVEGLIP--R 67 (222)
T ss_pred ccccee--ec-CCceEecchH------Hh-hhhhhH-hhcCccccCcc---------cccc----cccccceecccc--c
Confidence 566776 33 6666555544 32 345544 56778888887 2222 234699999999 9
Q ss_pred HHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeCCeeeEEEEeeecCCCcEEeccCceecChHHHHHHHhhcCCC
Q psy8789 513 AEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQGRVNHCRIRSKPESGQFYLVEKSYFDSLYSLISHYRTNHLR 590 (851)
Q Consensus 513 ~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~F~sl~eLI~~y~~~~l~ 590 (851)
..||.+|... .+|+||+|.+++.+|.|++|++....|.|+++- ++..|+|++.. ..|.|+.+|++||++++..
T Consensus 68 ~~ae~~l~~~---~~G~fl~r~s~sSPg~fsgsvr~~d~vqhfkvv-rpa~~k~~lw~-skfnslnplv~Y~rt~s~~ 140 (222)
T KOG3601|consen 68 PLAEDLLSKK---RDGDFLIRLSESSPGDFSGSVRFPDGVQHFKVV-RPAFGKYFLWS-SKFNSLNPLVSYHRTASQS 140 (222)
T ss_pred chhhhhhhcc---CcchhhhhhhhcCcccccccccCCCCceecccc-ccCccccccch-hhccCCCCCcccCcccccc
Confidence 9999999874 899999999999999999999999999999996 68889999885 6899999999999998753
No 71
>KOG2199|consensus
Probab=99.00 E-value=7.7e-11 Score=124.98 Aligned_cols=58 Identities=36% Similarity=0.677 Sum_probs=54.2
Q ss_pred CceEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCccccC
Q psy8789 783 ASITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEIE 841 (851)
Q Consensus 783 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i~ 841 (851)
....+||||||++.+++||+|++||||+|++..+..||+|++.++. |+||+|||...-
T Consensus 214 ~~rkVRALYDFeAaE~nELsFkaGdIItVLd~s~~~WWKG~~~~~~-GlFPsnfVT~~l 271 (462)
T KOG2199|consen 214 VVRKVRALYDFEAAEDNELSFKAGDIITVLDDSDPNWWKGENHRGI-GLFPSNFVTADL 271 (462)
T ss_pred cchhhhhhhcccccCCCccceecCcEEEEcccCCcchhccccCCcc-cccchhhhhhhh
Confidence 3568999999999999999999999999999999999999999998 999999998754
No 72
>KOG0030|consensus
Probab=98.98 E-value=3.4e-09 Score=97.44 Aligned_cols=131 Identities=13% Similarity=0.254 Sum_probs=108.3
Q ss_pred HHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCC--CCCCcCHHHHHHHHHhhhcccccc-cccc-
Q psy8789 113 WLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTR--KTNELAFDEFSILYNRIMFDEQMF-TDSY- 187 (851)
Q Consensus 113 wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~--~~g~L~f~EF~~~~~~l~~r~~~~-~~~f- 187 (851)
=++++|..+|..+ |+|+...+.-+|+.||.+++++++.+...+.+.+ +--.|+|++|+-+|..+.+..+.. ...|
T Consensus 12 e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q~t~edfv 91 (152)
T KOG0030|consen 12 EFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQGTYEDFV 91 (152)
T ss_pred HHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccccCcHHHHH
Confidence 3589999999999 9999999999999999999999999988887766 346899999999999887653221 1223
Q ss_pred ----ccccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhC
Q psy8789 188 ----SHYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFS 251 (851)
Q Consensus 188 ----~~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S 251 (851)
.+|+.+.|.|...||++.|...+ .++++++++.++.-.+. .+|.|+|+.|++.++|
T Consensus 92 egLrvFDkeg~G~i~~aeLRhvLttlG--ekl~eeEVe~Llag~eD------~nG~i~YE~fVk~i~~ 151 (152)
T KOG0030|consen 92 EGLRVFDKEGNGTIMGAELRHVLTTLG--EKLTEEEVEELLAGQED------SNGCINYEAFVKHIMS 151 (152)
T ss_pred HHHHhhcccCCcceeHHHHHHHHHHHH--hhccHHHHHHHHccccc------cCCcCcHHHHHHHHhc
Confidence 16777888999999999999886 67899999999876542 2389999999999886
No 73
>KOG1029|consensus
Probab=98.97 E-value=4.4e-10 Score=127.04 Aligned_cols=59 Identities=47% Similarity=0.843 Sum_probs=54.6
Q ss_pred ceEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCccccCCC
Q psy8789 784 SITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEIEPQ 843 (851)
Q Consensus 784 ~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i~~~ 843 (851)
.+++.|+|||.++++|||+|++||+|.|+.++++.||.|+++|.. |+||+|||......
T Consensus 1053 v~qviamYdY~AqndDELsF~kgdiI~VlnkdepeWW~Ge~ng~s-GLFPSNYV~k~ttd 1111 (1118)
T KOG1029|consen 1053 VCQVIAMYDYEAQNDDELSFKKGDIINVLNKDEPEWWSGERNGKS-GLFPSNYVQKQTTD 1111 (1118)
T ss_pred cceeEEeeccccCCcccccccCCCEEEecCCCChhhhcccccCcc-ccCccccccccccC
Confidence 478999999999999999999999999999999999999999998 99999999765443
No 74
>KOG1118|consensus
Probab=98.95 E-value=4.9e-10 Score=115.15 Aligned_cols=60 Identities=30% Similarity=0.659 Sum_probs=56.1
Q ss_pred CceEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCccccCCC
Q psy8789 783 ASITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEIEPQ 843 (851)
Q Consensus 783 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i~~~ 843 (851)
..++|+|+|||++++.+||-|++||+|+++...+.+||.|+..|.. |+||.|||+.+-+.
T Consensus 305 ~~p~cralYdFepenEgEL~fkeGDlI~l~~QIdenWyeG~~~g~s-G~FPvnYv~vlvpl 364 (366)
T KOG1118|consen 305 DQPCCRALYDFEPENEGELDFKEGDLITLTNQIDENWYEGEKHGES-GMFPVNYVEVLVPL 364 (366)
T ss_pred cchhheeeeccCCCCCCccCcccCceeeehhhcCcchhhheecCcc-CccccceeEEeccC
Confidence 4578999999999999999999999999999999999999999997 99999999987654
No 75
>KOG0194|consensus
Probab=98.94 E-value=2.4e-09 Score=121.10 Aligned_cols=101 Identities=32% Similarity=0.518 Sum_probs=84.3
Q ss_pred CCCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCc---e-EEEEEeC--CeeeEEEEEEcCc-EEEeCCcccCCHH
Q psy8789 658 EDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSS---Y-VISFRAE--DKIKHCRIRVEGR-LYTIGTTQFESLV 730 (851)
Q Consensus 658 ~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~---~-~LSv~~~--~~v~H~~I~~~~~-~~~~~~~~F~sl~ 730 (851)
..++||||.+.|++|+.+|.+ +|+||||.|+..+|. + +||++.. ..++||.|.+.++ .|......|+|+.
T Consensus 47 ~~~~~yHG~l~red~~~lL~~---~GDfLvR~s~~~~~~~~~~~vlSv~~~~~~~~~h~vi~~~~~~~~~~~~~~F~si~ 123 (474)
T KOG0194|consen 47 RELPYYHGLLPREDAEKLLKN---DGDFLVRASEPKEGEKREFVVLSVKWSVFKKIKHYVIKRNGNLFFFEGLRKFPTIS 123 (474)
T ss_pred hcCccccccccHhHHHHHhCC---CCceEEEeecccCCcceeEEEEEEEeecCCceeEEEEEEcCCeeEEeccccCCcHH
Confidence 347999999999999999999 999999999876553 4 9999985 7899999999544 5555556999999
Q ss_pred HHHHHhhhCCCcc---ceeecCCCcHhHHhhcCC
Q psy8789 731 ELISYYERHPLYK---KIELWYPVSEDLIQRMGL 761 (851)
Q Consensus 731 eLV~~y~~~~l~~---~~~L~~Pv~~~~~~~~~~ 761 (851)
+||.||..+.... ...|..||+++..+..+.
T Consensus 124 ~li~~~~~~~~~~~~~~~~L~~PI~r~~Wel~H~ 157 (474)
T KOG0194|consen 124 ELVNYYKFSKLEITGKNFFLKRPIPRQKWELSHS 157 (474)
T ss_pred HHHHHHHhcccceeccceeecccccccccEEecc
Confidence 9999999998665 456999999988766553
No 76
>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....
Probab=98.93 E-value=1.2e-09 Score=84.84 Aligned_cols=47 Identities=40% Similarity=0.873 Sum_probs=42.3
Q ss_pred EEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECC-ceEEEecC
Q psy8789 788 KALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGG-KRMHWFPS 834 (851)
Q Consensus 788 ~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g-~~~G~fP~ 834 (851)
+|+|+|.++.++||+|.+||+|.|+++.+++||.|+... +.+||||+
T Consensus 1 ~Alydf~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~~~~G~vP~ 48 (48)
T PF00018_consen 1 RALYDFDAEDPDELSFKKGDIIEVLEKSDDGWWKVRNESTGKEGWVPS 48 (48)
T ss_dssp EESSCBETSSTTBSEB-TTEEEEEEEESSSSEEEEEETTTTEEEEEEG
T ss_pred CCCeeeCCCCCCEEeEECCCEEEEEEecCCCEEEEEECCCCcEEEeeC
Confidence 589999999999999999999999999999999999865 45699996
No 77
>KOG0031|consensus
Probab=98.92 E-value=1.5e-08 Score=94.78 Aligned_cols=126 Identities=13% Similarity=0.289 Sum_probs=105.5
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcc--ccccc-cccc-
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFD--EQMFT-DSYS- 188 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r--~~~~~-~~f~- 188 (851)
++++|..+|+|+ |.|+.++|+.++.+||-.+++++|..|+++ .+|.|+|.-|+.++...+.. ++..+ ..|.
T Consensus 34 fKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~gtdpe~~I~~AF~~ 109 (171)
T KOG0031|consen 34 FKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLNGTDPEEVILNAFKT 109 (171)
T ss_pred HHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhcCCCHHHHHHHHHHh
Confidence 689999999999 999999999999999999999999999998 56899999999999765543 32222 2344
Q ss_pred cccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHh
Q psy8789 189 HYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLF 250 (851)
Q Consensus 189 ~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~ 250 (851)
++.++.|.|..+.|++.|.+ |+ .+.+++++.++++.+-.|.. |.+++..|+..|.
T Consensus 110 FD~~~~G~I~~d~lre~Ltt-~g-Dr~~~eEV~~m~r~~p~d~~-----G~~dy~~~~~~it 164 (171)
T KOG0031|consen 110 FDDEGSGKIDEDYLRELLTT-MG-DRFTDEEVDEMYREAPIDKK-----GNFDYKAFTYIIT 164 (171)
T ss_pred cCccCCCccCHHHHHHHHHH-hc-ccCCHHHHHHHHHhCCcccC-----CceeHHHHHHHHH
Confidence 55667788999999999987 44 56889999999999977654 8899999998886
No 78
>KOG0162|consensus
Probab=98.91 E-value=1.1e-09 Score=123.24 Aligned_cols=55 Identities=45% Similarity=0.833 Sum_probs=52.5
Q ss_pred eEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCcccc
Q psy8789 785 ITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEI 840 (851)
Q Consensus 785 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i 840 (851)
+.|.|+|+|.+++.+||+|++||+|.|+.++.+|||.|+++|+. ||||.|||+++
T Consensus 1052 p~~~A~Y~y~gq~~dEls~~~~diIei~~edpSGWw~gk~~~ke-G~~P~~Yv~~~ 1106 (1106)
T KOG0162|consen 1052 PVCEALYDYPGQDVDELSFKKGDIIEIMREDPSGWWLGKLNGKE-GLFPGNYVTEY 1106 (1106)
T ss_pred cceeeeccCCCCCcccccccCCCEEEEeccCCCcchhhccCCcc-ccccccccccC
Confidence 68999999999999999999999999999999999999999998 99999999863
No 79
>KOG1930|consensus
Probab=98.85 E-value=3.2e-09 Score=113.48 Aligned_cols=95 Identities=26% Similarity=0.385 Sum_probs=80.6
Q ss_pred CCCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEe----------C-----CeeeEEEEEE-cCcEEE-
Q psy8789 658 EDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRA----------E-----DKIKHCRIRV-EGRLYT- 720 (851)
Q Consensus 658 ~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~----------~-----~~v~H~~I~~-~~~~~~- 720 (851)
.+.-||..+|+|++|.+||+.+. ||+||||+|.+.+|.|-|.++. + .-|+||+|+. .+|.-+
T Consensus 210 TSKyWYKP~isREQAIalLrdke-PGtFvvRDS~SfrGayGLAlKVstPPPs~~~~~g~~~neLVRHFLIE~spkGVkLK 288 (483)
T KOG1930|consen 210 TSKYWYKPNISREQAIALLRDKE-PGTFVVRDSHSFRGAYGLALKVSTPPPSVQPGDGSDSNELVRHFLIEPSPKGVKLK 288 (483)
T ss_pred ccccccCCCCCHHHHHHHhhcCC-CCeEEEecCCcCCCccceEEEeccCCCcccCCCCCchhhhhhhheeccCCCceecc
Confidence 35679999999999999999998 9999999999999999999986 1 3499999998 444333
Q ss_pred --eCCcccCCHHHHHHHhhhCCCccceeecCCCcH
Q psy8789 721 --IGTTQFESLVELISYYERHPLYKKIELWYPVSE 753 (851)
Q Consensus 721 --~~~~~F~sl~eLV~~y~~~~l~~~~~L~~Pv~~ 753 (851)
-+.+.|.||..||--|.-.+|.++|.|..|-..
T Consensus 289 GC~nEP~FGSLSALV~QHSIt~LALPckL~iP~rD 323 (483)
T KOG1930|consen 289 GCDNEPVFGSLSALVYQHSITALALPCKLVIPDRD 323 (483)
T ss_pred CCCCCCccchhHHHHhhccchhhhcceeEeccCCC
Confidence 334499999999999999999999999876543
No 80
>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies.
Probab=98.83 E-value=8.6e-09 Score=81.58 Aligned_cols=53 Identities=53% Similarity=0.981 Sum_probs=48.0
Q ss_pred EEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCccc
Q psy8789 787 VKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAE 839 (851)
Q Consensus 787 ~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~ 839 (851)
++|+|+|.++.+++|+|.+||.|.+++..++|||.++..++..||||++||++
T Consensus 2 ~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~~ 54 (54)
T cd00174 2 VRALYDYDARDPDELSFKKGDIIEVLEKSDDGWWEGRLLGGKRGLFPSNYVEE 54 (54)
T ss_pred EEEEEeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEccccCcC
Confidence 68999999999999999999999999998899999998773459999999863
No 81
>smart00326 SH3 Src homology 3 domains. Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.
Probab=98.83 E-value=8.2e-09 Score=82.89 Aligned_cols=56 Identities=50% Similarity=0.952 Sum_probs=49.8
Q ss_pred eEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCcccc
Q psy8789 785 ITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEI 840 (851)
Q Consensus 785 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i 840 (851)
..++|+|+|.+..+++|+|.+||.|.+++..++|||.++..++..||||++||+.+
T Consensus 3 ~~~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~~~ 58 (58)
T smart00326 3 PQVRALYDYTAQDPDELSFKKGDIITVLEKSDDGWWKGRLGRGKEGLFPSNYVEEI 58 (58)
T ss_pred cEEEEeeeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEEEeCCCCEEEEchHHEEEC
Confidence 46899999999999999999999999999988999999987333499999999753
No 82
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=98.79 E-value=1e-08 Score=78.41 Aligned_cols=51 Identities=29% Similarity=0.535 Sum_probs=43.9
Q ss_pred eeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhh
Q psy8789 127 TVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIM 177 (851)
Q Consensus 127 ~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~ 177 (851)
+++++|++++|+.+|+.+++.++..+|+++|++++|.|+.+||..||+.|+
T Consensus 1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~LT 51 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKRLT 51 (51)
T ss_dssp EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHHhC
Confidence 589999999999999999999999999999999999999999999999874
No 83
>KOG0036|consensus
Probab=98.74 E-value=9.2e-08 Score=102.92 Aligned_cols=133 Identities=12% Similarity=0.220 Sum_probs=109.1
Q ss_pred hhHHHHHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCC-CCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcccccccc
Q psy8789 108 LNVERWLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCK-MSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQMFTD 185 (851)
Q Consensus 108 ~~~~~wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~-~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~~~ 185 (851)
..++.-++.+|..+|.++ |.+++++|.+.+.++.++ ...+....+|..+|.|++|.++|+||..++..-- .....
T Consensus 10 ~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~E---~~l~~ 86 (463)
T KOG0036|consen 10 EERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNKE---LELYR 86 (463)
T ss_pred HHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHhH---HHHHH
Confidence 334555688999999988 999999999999999888 5566777899999999999999999999876521 11123
Q ss_pred ccc-cccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHh
Q psy8789 186 SYS-HYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLF 250 (851)
Q Consensus 186 ~f~-~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~ 250 (851)
.|. .+.+.++.|..+|+.+.|++.+ ..+++++++.+++..++++. ..|+++||..|++
T Consensus 87 ~F~~iD~~hdG~i~~~Ei~~~l~~~g--i~l~de~~~k~~e~~d~~g~-----~~I~~~e~rd~~l 145 (463)
T KOG0036|consen 87 IFQSIDLEHDGKIDPNEIWRYLKDLG--IQLSDEKAAKFFEHMDKDGK-----ATIDLEEWRDHLL 145 (463)
T ss_pred HHhhhccccCCccCHHHHHHHHHHhC--CccCHHHHHHHHHHhccCCC-----eeeccHHHHhhhh
Confidence 343 5667778899999999999876 45789999999999988765 7899999999976
No 84
>KOG4348|consensus
Probab=98.73 E-value=3.1e-09 Score=113.50 Aligned_cols=62 Identities=34% Similarity=0.693 Sum_probs=57.6
Q ss_pred CceEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCccccCCCCC
Q psy8789 783 ASITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEIEPQHN 845 (851)
Q Consensus 783 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i~~~~~ 845 (851)
+.+.|+++|.|.+++.+||.|+.||+|.+++..+.|||.|.++|.. |+||+|||.++.....
T Consensus 99 ~~r~c~v~f~Y~pqndDELelkVGDiIeli~eVEeGWw~G~Lngk~-GmFPsNFVkel~~~sd 160 (627)
T KOG4348|consen 99 QARICVVTFAYSPQNDDELELKVGDIIELISEVEEGWWKGKLNGKV-GMFPSNFVKELPTPSD 160 (627)
T ss_pred cceeEEEEEeecCCCCceeeeeeccHHHhhhHhhhhhhhceecCcc-cccchhhceecCCCCc
Confidence 5678999999999999999999999999999999999999999998 9999999999876554
No 85
>cd08586 PI-PLCc_BcPLC_like Catalytic domain of Bacillus cereus phosphatidylinositol-specific phospholipases C and similar proteins. This subfamily corresponds to the catalytic domain present in Bacillus cereus phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) and its sequence homologs found in bacteria and eukaryota. Bacterial PI-PLCs participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although their precise physiological function remains unclear, bacterial PI-PLCs may function as virulence factors in some pathogenic bacteria. Bacterial PI-PLCs contain a single TIM-barrel type catalytic domain. Their catalytic mechanism is based on general base and acid catalysis utilizing two well conserved histidines, and consists of two steps, a phosphotransfer and a phosphodiesterase reaction. This family also includes some uncharacterized eukaryotic homologs, which
Probab=98.67 E-value=3.2e-08 Score=106.25 Aligned_cols=142 Identities=20% Similarity=0.230 Sum_probs=109.4
Q ss_pred CCccccccccccCCccccCCc--cccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHhhc
Q psy8789 269 TKPLSHYFINSSHNTYLTGDQ--FSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIRDH 346 (851)
Q Consensus 269 ~~pl~~Y~i~sshntyl~~~q--~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~~~ 346 (851)
+.||++.-|-.|||++-...- -.++.....+..-|..|+|.++|+|...++++-.++||..... .+|.||++.|+++
T Consensus 7 ~~~l~~lsipGTHdS~~~~~~~~~~~~~Q~~~i~~QL~~GiR~lDiR~~~~~~~~l~~~Hg~~~~~-~~~~dvL~~i~~F 85 (279)
T cd08586 7 DTPLSELSIPGTHDSGALHGGLSSSVQCQDWSIAEQLNAGIRFLDIRLRLIDNNDLAIHHGPFYQG-LTFGDVLNECYSF 85 (279)
T ss_pred CCEeeeeeecccchhccccCCCccceecCCCCHHHHHhcCCeEEEEEeeecCCCeEEEEccCcccc-CcHHHHHHHHHHH
Confidence 789999999999998754332 3345555677888999999999999988767889999965544 8999999999998
Q ss_pred ccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCC--CCCCCCCChhhhhcccccccccCCC
Q psy8789 347 AFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVE--KNETVLPSPHQLRGKILLKHKKLPE 414 (851)
Q Consensus 347 af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~--~~~~~lpsp~~l~~kilik~k~~~~ 414 (851)
--..-.-.|||+|.++++... -.+-+.++|.+.+...+-. ......|+..++||||++-.+-...
T Consensus 86 L~~nP~E~Vil~l~~e~~~~~---~~~~f~~~~~~~~~~~~~~~~~~~~~~PtLge~RGKIVLl~rf~~~ 152 (279)
T cd08586 86 LDANPSETIIMSLKQEGSGDG---NTDSFAEIFKEYLDNYPSYFYYTESKIPTLGEVRGKIVLLRRFDGD 152 (279)
T ss_pred HHhCCCcEEEEEEEecCCCCC---chHHHHHHHHHHHhcccccccccCCCCCchHHhcccEEEEEecCCC
Confidence 877777889999999998763 3334555555555543221 1357899999999999998765443
No 86
>KOG0037|consensus
Probab=98.65 E-value=2.8e-07 Score=91.88 Aligned_cols=127 Identities=19% Similarity=0.206 Sum_probs=103.9
Q ss_pred HHHHHHhHhcCCC-CeeeHHHHHHHHHhc-CCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhccccccccccc-c
Q psy8789 113 WLRKHFYSLEGPR-ETVNLKDIKTFLPRV-NCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQMFTDSYS-H 189 (851)
Q Consensus 113 wlr~~F~~~D~d~-G~Is~~El~~ll~~l-~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~~~~f~-~ 189 (851)
-+...|..+|.|+ |.|+-+|++++|... +-..+.+.++.|+..+|.+++|+|+|.||..+++.+..= ...|. .
T Consensus 58 ~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~~W----r~vF~~~ 133 (221)
T KOG0037|consen 58 QLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYINQW----RNVFRTY 133 (221)
T ss_pred HHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHH----HHHHHhc
Confidence 4556788999999 999999999998743 455778888889999999999999999999999987531 12344 4
Q ss_pred ccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHh
Q psy8789 190 YSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLF 250 (851)
Q Consensus 190 ~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~ 250 (851)
|.++.+.|+..||+..|...+ -+++++-...|+++|++... +.|.||.|+..+.
T Consensus 134 D~D~SG~I~~sEL~~Al~~~G--y~Lspq~~~~lv~kyd~~~~-----g~i~FD~FI~ccv 187 (221)
T KOG0037|consen 134 DRDRSGTIDSSELRQALTQLG--YRLSPQFYNLLVRKYDRFGG-----GRIDFDDFIQCCV 187 (221)
T ss_pred ccCCCCcccHHHHHHHHHHcC--cCCCHHHHHHHHHHhccccC-----CceeHHHHHHHHH
Confidence 566777899999999998655 67899888999999986543 7899999998764
No 87
>KOG4348|consensus
Probab=98.61 E-value=3.1e-08 Score=105.94 Aligned_cols=60 Identities=30% Similarity=0.710 Sum_probs=54.7
Q ss_pred CceEEEEEEeecCCCCCCcccCCCCEEEEeEec--CCCeEEEEECCceEEEecCCCccccCCC
Q psy8789 783 ASITVKALYDYQARNDDELSFPKHAIISNVTRA--EGGWWRGDYGGKRMHWFPSNYVAEIEPQ 843 (851)
Q Consensus 783 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~--~~gWw~g~~~g~~~G~fP~nyv~~i~~~ 843 (851)
...+|+++|.|++++.+||.|+.||+|.++.++ +.|||+|+++|+. |+||-|||+.+..+
T Consensus 260 tKeycrv~F~Ye~qndDELt~KEgdil~lItK~cgdaGWweGELnGk~-GvFPDNFv~lv~~~ 321 (627)
T KOG4348|consen 260 TKEYCRVKFVYEPQNDDELTLKEGDILILITKNCGDAGWWEGELNGKK-GVFPDNFVELVQVP 321 (627)
T ss_pred hhhheeeeeeecCCCccceeeccccEEEEecccccccceeeeeecCcc-ccCCchhhhhcCCc
Confidence 346899999999999999999999999999887 5699999999998 99999999988754
No 88
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.59 E-value=1.1e-07 Score=83.84 Aligned_cols=65 Identities=18% Similarity=0.339 Sum_probs=59.5
Q ss_pred HHHHHhHhcC-CC-CeeeHHHHHHHHHh-cCCCCCH-HHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhc
Q psy8789 114 LRKHFYSLEG-PR-ETVNLKDIKTFLPR-VNCKMST-NKLREHFQEVDTRKTNELAFDEFSILYNRIMF 178 (851)
Q Consensus 114 lr~~F~~~D~-d~-G~Is~~El~~ll~~-l~~~~s~-~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~ 178 (851)
|+.+|..+|+ ++ |.|+.+|++.+|++ |+-.++. .++.++|+.+|.|++|.|+|+||..++..++.
T Consensus 10 l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~~ 78 (89)
T cd05022 10 LVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELAK 78 (89)
T ss_pred HHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence 5779999999 77 99999999999999 9877887 89999999999999999999999999988754
No 89
>KOG4225|consensus
Probab=98.58 E-value=4.9e-08 Score=105.29 Aligned_cols=56 Identities=30% Similarity=0.708 Sum_probs=53.9
Q ss_pred EEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCccccCC
Q psy8789 786 TVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEIEP 842 (851)
Q Consensus 786 ~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i~~ 842 (851)
-++|+|+|+++.+.||+|.+||||.|+.+.+..|++|+.+|.. |+||+||||.+..
T Consensus 232 ~aralf~F~~qt~kEL~~~kGDIVyI~rkvD~nWyeGEhhGr~-GifP~sYvE~~~~ 287 (489)
T KOG4225|consen 232 AARALFDFEAQTPKELPFNKGDIVYILRKVDQNWYEGEHHGRV-GIFPASYVEILTP 287 (489)
T ss_pred hhhheeccccCCccccccCCCCEEEEEeeccCceeeeeeccee-cceechheeecCc
Confidence 4899999999999999999999999999999999999999998 9999999999877
No 90
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.55 E-value=1.9e-07 Score=77.62 Aligned_cols=60 Identities=22% Similarity=0.402 Sum_probs=53.0
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHH----HHHhhhcCCCCCCcCHHHHHHHH
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLR----EHFQEVDTRKTNELAFDEFSILY 173 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~----~~f~e~D~~~~g~L~f~EF~~~~ 173 (851)
|+++|..+|.|+ |.|+.+|+..+++.++...+...+. .+|+.+|.|++|.|+|+||..+|
T Consensus 2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 578999999999 9999999999999999777655444 55999999999999999999886
No 91
>KOG2856|consensus
Probab=98.55 E-value=2.3e-08 Score=105.07 Aligned_cols=55 Identities=38% Similarity=0.770 Sum_probs=49.5
Q ss_pred eEEEEEEeecCCCCCCcccCCCCEEEEeEec-CCCeEEEEEC-CceEEEecCCCcccc
Q psy8789 785 ITVKALYDYQARNDDELSFPKHAIISNVTRA-EGGWWRGDYG-GKRMHWFPSNYVAEI 840 (851)
Q Consensus 785 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~-~~gWw~g~~~-g~~~G~fP~nyv~~i 840 (851)
..++|||||.++..+||+|+.||.|+.++.. +.||..|+++ |.. |++|+|||+-+
T Consensus 415 v~vraLYDY~gqE~DElsfkaGd~l~kl~eeDeqGWC~Grl~~G~v-GLyPAnYVe~~ 471 (472)
T KOG2856|consen 415 VRVRALYDYAGQEGDELSFKAGDELEKLEEEDEQGWCKGRLDSGRV-GLYPANYVECI 471 (472)
T ss_pred eeEEeeeccCcccccchhhccccHhhhcCCccccccccccccCCcc-cccchhhhhcc
Confidence 6799999999999999999999999988655 5699999998 666 99999999865
No 92
>KOG1930|consensus
Probab=98.54 E-value=1e-07 Score=102.21 Aligned_cols=97 Identities=30% Similarity=0.445 Sum_probs=76.2
Q ss_pred CCCCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEe----------C-----CeeeEEEEeeecCC
Q psy8789 499 FGEKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWW----------Q-----GRVNHCRIRSKPES 563 (851)
Q Consensus 499 ~~~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~----------~-----~~v~H~~I~~~~~~ 563 (851)
.+.=||..+|+ |++|..||+++ ++|+||||+|.+..|.|-|.++. + .-|+||.|+. ...
T Consensus 210 TSKyWYKP~is--REQAIalLrdk---ePGtFvvRDS~SfrGayGLAlKVstPPPs~~~~~g~~~neLVRHFLIE~-spk 283 (483)
T KOG1930|consen 210 TSKYWYKPNIS--REQAIALLRDK---EPGTFVVRDSHSFRGAYGLALKVSTPPPSVQPGDGSDSNELVRHFLIEP-SPK 283 (483)
T ss_pred ccccccCCCCC--HHHHHHHhhcC---CCCeEEEecCCcCCCccceEEEeccCCCcccCCCCCchhhhhhhheecc-CCC
Confidence 44679999999 99999999996 89999999999999999999985 1 2489999983 333
Q ss_pred CcEEecc---CceecChHHHHHHHhhcCCCCCcceeEecCCCCCC
Q psy8789 564 GQFYLVE---KSYFDSLYSLISHYRTNHLRSQEFLITLQEPVPQP 605 (851)
Q Consensus 564 g~~~~~~---~~~F~sl~eLI~~y~~~~l~~~gl~~~L~~p~~~~ 605 (851)
| .-+.+ ...|.||..||--|+-.+ -.|+|+|..|=..|
T Consensus 284 G-VkLKGC~nEP~FGSLSALV~QHSIt~---LALPckL~iP~rDp 324 (483)
T KOG1930|consen 284 G-VKLKGCDNEPVFGSLSALVYQHSITA---LALPCKLVIPDRDP 324 (483)
T ss_pred c-eeccCCCCCCccchhHHHHhhccchh---hhcceeEeccCCCc
Confidence 3 45543 459999999997666555 35778887765443
No 93
>KOG0044|consensus
Probab=98.48 E-value=1.4e-06 Score=87.30 Aligned_cols=137 Identities=12% Similarity=0.157 Sum_probs=101.1
Q ss_pred HHHHHHHhHhcCCC--CeeeHHHHHHHHHhcCC-CCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhccc--cccccc
Q psy8789 112 RWLRKHFYSLEGPR--ETVNLKDIKTFLPRVNC-KMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDE--QMFTDS 186 (851)
Q Consensus 112 ~wlr~~F~~~D~d~--G~Is~~El~~ll~~l~~-~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~--~~~~~~ 186 (851)
+|++..+..+-.+. |.++.++.+.++.+... .-++.....+|..+|.|++|.|+|.||+..+..+.... +.....
T Consensus 26 ~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~eekl~w~ 105 (193)
T KOG0044|consen 26 KEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEEKLKWA 105 (193)
T ss_pred HHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHHhhhh
Confidence 35555555554444 99999999999999875 44455667899999999999999999999887765432 222355
Q ss_pred cccc-cCCCCccCHHHHHHHHHHhcCcCcC---------CHHHHHHHHHHhccccccccCCCcccHHHHHHHHhCcC
Q psy8789 187 YSHY-SSDGQTVTASELTNFLIREQNETNV---------NEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFSKQ 253 (851)
Q Consensus 187 f~~~-~~~~~~lt~~ef~~FL~~~Q~e~~~---------s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S~~ 253 (851)
|..| .+++|+||.+|+.++++........ -++.+..++.++|.|.+ |.+|+++|......+.
T Consensus 106 F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~D-----g~lT~eef~~~~~~d~ 177 (193)
T KOG0044|consen 106 FRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKD-----GKLTLEEFIEGCKADP 177 (193)
T ss_pred heeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCC-----CcccHHHHHHHhhhCH
Confidence 6654 5667789999999988765332221 22678888999998877 8999999998876543
No 94
>cd08588 PI-PLCc_At5g67130_like Catalytic domain of Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. This subfamily corresponds to the catalytic domain present in Arabidopsis thaliana PI-PLC X domain-containing protein At5g67130 and its uncharacterized homologs. Members in this family show high sequence similarity to bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13), which participates in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG).
Probab=98.47 E-value=3.2e-07 Score=98.04 Aligned_cols=134 Identities=16% Similarity=0.197 Sum_probs=99.9
Q ss_pred cCcCCccccccccccCCccccCCcc--ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCcee-eeehHHHHHH
Q psy8789 266 QDMTKPLSHYFINSSHNTYLTGDQF--SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTT-KIKFKDVVKT 342 (851)
Q Consensus 266 ~dm~~pl~~Y~i~sshntyl~~~q~--~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~-~i~~~~v~~~ 342 (851)
.--++||++|.+-.+||+|..+..- .+..-.......|..|+|-++||++... +...++||..... ..+|.|+++.
T Consensus 6 ~~~~~~~~~it~~gtHNS~~~~~~~~~~~~nQ~~si~~QL~~GiR~l~ld~~~~~-~~~~lcH~~~~~~~~~~~~d~L~~ 84 (270)
T cd08588 6 ALCDRTYDEYTFLTTHNSFANSEDAFFLAPNQEDDITKQLDDGVRGLMLDIHDAN-GGLRLCHSVCGLGDGGPLSDVLRE 84 (270)
T ss_pred ccCCcccccceeEEeccCccccCCCcccccccCCCHHHHHHhCcceEeeeEEecC-CCEEEECCCccccCCccHHHHHHH
Confidence 3457999999999999999887542 3333334566789999999999999874 6688999864433 7899999999
Q ss_pred HhhcccccCCCc-eEEEeccCCCHHHHHHHHHHHH-HHhhcccCCCcCCC-CCCCCCChhhhh
Q psy8789 343 IRDHAFETSKYP-VILSIEDNCSLPQQRVMAQIML-DIFKDMLLIHPVEK-NETVLPSPHQLR 402 (851)
Q Consensus 343 i~~~af~~s~yP-~ils~e~hc~~~~q~~~a~~~~-~~~g~~l~~~~~~~-~~~~lpsp~~l~ 402 (851)
|+++.= +.|.- |||.||++.+...+ ..+.+++ ..||+.+|..+... .....|+.++|.
T Consensus 85 i~~fL~-~nP~EvV~l~l~~~~~~~~~-~~~~~~~~~gl~~~~y~p~~~~~~~~~WPTL~emi 145 (270)
T cd08588 85 VVDFLD-ANPNEVVTLFLEDYVSPGPL-LRSKLFRVAGLTDLVYVPDAMPWAGSDWPTLGEMI 145 (270)
T ss_pred HHHHHH-hCCCcEEEEEEEeCCCcchH-HHHHHhhhcCccceEEcCCCCcCCCCCCCCHHHHH
Confidence 999863 44444 88999999987654 2333333 57999999743221 246789999997
No 95
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.42 E-value=7.9e-07 Score=78.35 Aligned_cols=65 Identities=12% Similarity=0.214 Sum_probs=59.0
Q ss_pred HHHHHhHhc-CCC-C-eeeHHHHHHHHHh-----cCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhc
Q psy8789 114 LRKHFYSLE-GPR-E-TVNLKDIKTFLPR-----VNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMF 178 (851)
Q Consensus 114 lr~~F~~~D-~d~-G-~Is~~El~~ll~~-----l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~ 178 (851)
++++|..+| +++ | .|+.+|++.+|+. ++...+..++.++++++|.|++|.|+|+||+.++..++.
T Consensus 10 l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~~ 82 (88)
T cd05027 10 LIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMVTT 82 (88)
T ss_pred HHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 467999998 688 9 6999999999999 898899999999999999999999999999999877653
No 96
>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A.
Probab=98.41 E-value=7.4e-06 Score=83.94 Aligned_cols=170 Identities=16% Similarity=0.345 Sum_probs=107.6
Q ss_pred CCCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEe-CCeeeEEEEeeecCC-----Cc-EEeccCc
Q psy8789 500 GEKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWW-QGRVNHCRIRSKPES-----GQ-FYLVEKS 572 (851)
Q Consensus 500 ~~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~-~~~v~H~~I~~~~~~-----g~-~~~~~~~ 572 (851)
.+|-|+ +++ -.+|++.|.+. +.|.++||.|.......+|+++. +|-..|+.|...... |. +.+. +.
T Consensus 37 ~HP~F~-n~~--~~qAe~~L~~~---~~Ge~iIRPSSkG~dhL~vTwKv~d~vyqHidV~E~~K~n~~slG~~L~i~-~~ 109 (220)
T PF14633_consen 37 KHPLFK-NFN--YKQAEEYLADQ---DVGEVIIRPSSKGPDHLTVTWKVADGVYQHIDVKEEDKENEFSLGKTLKIG-GE 109 (220)
T ss_dssp CSTTEE-SS---HHHHHHHHCCS----TT-EEEEE-TTTTTEEEEEEEEETTEEEEEEEEEECSSSTTS-SSEEEET-TE
T ss_pred cCCCcc-CCC--HHHHHHHHhcC---CCCCEEEeeCCCCCCeEEEEEEEcCCcEEEEEEEECCCcCccccCcEEEEC-Ce
Confidence 457777 898 89999999985 68999999997666667888885 667789999754332 22 4444 68
Q ss_pred eecChHHHHHHHhhcCCCCCcceeEecCCCCCCCCccccccccccccchhhhhhhhcccCCCceeeecCCCCCCCCCCCC
Q psy8789 573 YFDSLYSLISHYRTNHLRSQEFLITLQEPVPQPNQHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYEPVP 652 (851)
Q Consensus 573 ~F~sl~eLI~~y~~~~l~~~gl~~~L~~p~~~~~~~~~~~~~~~~l~~~~ae~~l~~v~~dG~flvr~~~~~~~~~~p~~ 652 (851)
.|.+|.|||.-|-..-.. ..++++ .
T Consensus 110 ~yeDLDEii~r~V~pm~~-------------------------------~v~~~~----~-------------------- 134 (220)
T PF14633_consen 110 EYEDLDEIIARHVEPMAR-------------------------------NVEEMM----N-------------------- 134 (220)
T ss_dssp EESSHHHHHHHCHHHHHH-------------------------------HHHHHH----C--------------------
T ss_pred EECCHHHHHHHHHHHHHH-------------------------------HHHHHH----h--------------------
Confidence 999999999988643210 011111 0
Q ss_pred CCCCCCCCCccCCCCCHHHHHHHhcCC----CCCCeEEEeecCCCCCceEEEEEeCCeeeEEE--EEEcCcEEEeCCccc
Q psy8789 653 QPNQHEDKEWYHPTATRSQAEDLLRRV----PSDGAFLVRPSENDNSSYVISFRAEDKIKHCR--IRVEGRLYTIGTTQF 726 (851)
Q Consensus 653 ~~~~~~~~~Wyhg~isR~eAe~lL~~~----~~~G~FLVR~s~~~~~~~~LSv~~~~~v~H~~--I~~~~~~~~~~~~~F 726 (851)
...|.. =+++++++.|... +.--.|-+=-+...||.|.|+++......|.. |.-....|.+.+..|
T Consensus 135 -------h~kf~~-g~~~e~e~~L~~~k~~nP~~i~Y~f~~~~~~PG~F~L~y~~~~~~~~~~~~v~V~p~Gf~~r~~~f 206 (220)
T PF14633_consen 135 -------HRKFKD-GTKEEVEEWLKEEKKANPKRIPYAFCISKEHPGYFILSYKPNKNPRHEYWPVKVTPDGFRFRKQVF 206 (220)
T ss_dssp -------STTEES-S-CCCCHHHHHCHHHHSTTS-EEEEEE-TTSTTEEEEEEESSTTS-EEEEEEEE-SSSEEETTEEE
T ss_pred -------CccccC-CCHHHHHHHHHHHHHhCCCCceEEEEECCCCCCEEEEEEEcCCCCceEEeeEEEecCcEEEecccC
Confidence 000110 1233444444331 22334555556677999999999866555444 766555577889999
Q ss_pred CCHHHHHHHhhhC
Q psy8789 727 ESLVELISYYERH 739 (851)
Q Consensus 727 ~sl~eLV~~y~~~ 739 (851)
+++.+|+.+++.+
T Consensus 207 ~~~~~L~~~FK~~ 219 (220)
T PF14633_consen 207 PSLDRLINWFKKH 219 (220)
T ss_dssp SSHHHHHHHHHHH
T ss_pred CCHHHHHHHHhhc
Confidence 9999999999864
No 97
>KOG4225|consensus
Probab=98.39 E-value=2e-07 Score=100.62 Aligned_cols=54 Identities=37% Similarity=0.748 Sum_probs=49.4
Q ss_pred eEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEE--EECCceEEEecCCCccc
Q psy8789 785 ITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRG--DYGGKRMHWFPSNYVAE 839 (851)
Q Consensus 785 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g--~~~g~~~G~fP~nyv~~ 839 (851)
..++|||.|.+++++||.|..||+|.|++++++||..| +..|.- |.||-|||+.
T Consensus 433 l~yrAly~Y~pqnedeLEl~egDii~VmeKcddgWfvGts~rtg~f-GtFPgnyV~~ 488 (489)
T KOG4225|consen 433 LKYRALYSYRPQNEDELELREGDIIDVMEKCDDGWFVGTSRRTGKF-GTFPGNYVKR 488 (489)
T ss_pred ccceeccccCCCCchhheeccCCEEeeeecccCcceeccceecccc-cccCcccccc
Confidence 45999999999999999999999999999999999999 455665 9999999985
No 98
>KOG1029|consensus
Probab=98.39 E-value=1.6e-07 Score=106.80 Aligned_cols=60 Identities=40% Similarity=0.789 Sum_probs=53.9
Q ss_pred ceEEEEEEeecCCCCCCcccCCCCEEEEeEec--CCCeEEEEECCceEEEecCCCccccCCCC
Q psy8789 784 SITVKALYDYQARNDDELSFPKHAIISNVTRA--EGGWWRGDYGGKRMHWFPSNYVAEIEPQH 844 (851)
Q Consensus 784 ~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~--~~gWw~g~~~g~~~G~fP~nyv~~i~~~~ 844 (851)
...|+|||.|++++.+|++|.+||||.|-+.. ++||..|.++|.. ||||.|||+.+....
T Consensus 693 ~vkyrAly~FeaRs~dEisf~pGDII~V~esq~aEPGWlaGel~gkt-GWFPenyvEki~~~e 754 (1118)
T KOG1029|consen 693 TVKYRALYPFEARSHDEISFEPGDIIIVFESQAAEPGWLAGELRGKT-GWFPENYVEKIPAVE 754 (1118)
T ss_pred eEEEeeecccccCCcccccccCCCEEEEehhccCCcccccceecccc-CcCcHHHHhhcccCC
Confidence 46899999999999999999999999997544 7899999999998 999999999876543
No 99
>KOG3751|consensus
Probab=98.38 E-value=1.5e-07 Score=103.66 Aligned_cols=105 Identities=28% Similarity=0.504 Sum_probs=90.5
Q ss_pred CCCCCCCCCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeCCeeeEEEEeeecCCCcEEec---c
Q psy8789 494 NDELHFGEKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQGRVNHCRIRSKPESGQFYLV---E 570 (851)
Q Consensus 494 ~~~~~~~~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~---~ 570 (851)
....|.++.||||.|+ |+++.++++.+ +..+|.||+|+|.++|..|++++.....|+||+|....+.|..+++ +
T Consensus 512 ~~~~h~sq~~~~~kis--~~es~~~ikq~-glv~~~~l~r~sqsnP~~~~~~~~~~~~v~~~~~~P~~~~~~~~~t~~~g 588 (622)
T KOG3751|consen 512 CQAIHRSQTWFHGKIS--RDESQRLIKQQ-GLVDGLFLVRDSQSNPKIFVLSLCHPQKVKHFQILPVEDDGCTFFTLDDG 588 (622)
T ss_pred hhhhcccccCcccccC--chhhhhHHHhc-ccceeeeeecccccCcchhhhhccCCccccceEEecCCCCCceeeccCCC
Confidence 3566888999999999 99999999998 8899999999999999999999999999999999987777874443 2
Q ss_pred CceecChHHHHHHHhhcCCCCCcceeEecCCCCC
Q psy8789 571 KSYFDSLYSLISHYRTNHLRSQEFLITLQEPVPQ 604 (851)
Q Consensus 571 ~~~F~sl~eLI~~y~~~~l~~~gl~~~L~~p~~~ 604 (851)
...|.++..|+++|+-+. .-++|.|.+.|.+
T Consensus 589 ~t~~sd~~ql~~~~ql~k---~~l~~al~~~~~r 619 (622)
T KOG3751|consen 589 PTKFSDLIQLVEFYQLNK---GVLPCALKHCCER 619 (622)
T ss_pred CccccccccccchhhcCC---CcchHHHHHHHHh
Confidence 469999999999999885 6677888777753
No 100
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.28 E-value=2.6e-06 Score=76.05 Aligned_cols=64 Identities=20% Similarity=0.395 Sum_probs=54.3
Q ss_pred HHHHHhHhc-CCC-C-eeeHHHHHHHHHh-c----CCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhh
Q psy8789 114 LRKHFYSLE-GPR-E-TVNLKDIKTFLPR-V----NCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIM 177 (851)
Q Consensus 114 lr~~F~~~D-~d~-G-~Is~~El~~ll~~-l----~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~ 177 (851)
++++|..+| +|+ | +|+.+|++.++++ + ....+..++.++++++|.|++|.|+|+||+.++..|+
T Consensus 12 ~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~ 83 (93)
T cd05026 12 LIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT 83 (93)
T ss_pred HHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 466799998 566 6 6999999999976 2 3345778999999999999999999999999998875
No 101
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.27 E-value=2.6e-06 Score=75.93 Aligned_cols=65 Identities=18% Similarity=0.364 Sum_probs=56.9
Q ss_pred HHHHHhHhc-CCC-C-eeeHHHHHHHHHh-cC----CCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhc
Q psy8789 114 LRKHFYSLE-GPR-E-TVNLKDIKTFLPR-VN----CKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMF 178 (851)
Q Consensus 114 lr~~F~~~D-~d~-G-~Is~~El~~ll~~-l~----~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~ 178 (851)
++++|..+| .++ | .|+.+|++.+|+. ++ ..++..++.++|+++|.+++|.|+|+||+.++..++.
T Consensus 11 l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~~ 83 (92)
T cd05025 11 LINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTV 83 (92)
T ss_pred HHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHH
Confidence 578999997 888 9 5999999999986 54 4568889999999999999999999999999887654
No 102
>KOG2546|consensus
Probab=98.24 E-value=4.1e-07 Score=97.90 Aligned_cols=57 Identities=40% Similarity=0.759 Sum_probs=53.8
Q ss_pred eEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCccccCC
Q psy8789 785 ITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEIEP 842 (851)
Q Consensus 785 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i~~ 842 (851)
..++++|||.+...+||+|.+|.+|.|+.++++|||+|..+|.. |+||-|||+.+..
T Consensus 424 EkVv~iydy~~~KddeLsf~E~ailyv~kknddgw~EgV~~~VT-glFpgnyve~~~~ 480 (483)
T KOG2546|consen 424 EKVVAIYDYTADKDDELSFAEGAILYVLKKNDDGWYEGVQDGVT-GLFPGNYVEPLKA 480 (483)
T ss_pred HHHHhhcccccccccccccccccEEEEEEecCCcchhheecCcc-eeccCcccccccc
Confidence 46899999999999999999999999999999999999999998 9999999998754
No 103
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.19 E-value=4.3e-06 Score=69.36 Aligned_cols=60 Identities=23% Similarity=0.328 Sum_probs=54.4
Q ss_pred HHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhh
Q psy8789 115 RKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRI 176 (851)
Q Consensus 115 r~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l 176 (851)
+++|..+|.++ |.|+.+|++.++++++. +...+..+|+.+|.+++|.|+|+||+.++..+
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 56899999999 99999999999999875 78889999999999999999999999987654
No 104
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.18 E-value=5.9e-06 Score=72.82 Aligned_cols=65 Identities=18% Similarity=0.449 Sum_probs=56.5
Q ss_pred HHHHHhHhcC-CC--CeeeHHHHHHHHHh---cCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhc
Q psy8789 114 LRKHFYSLEG-PR--ETVNLKDIKTFLPR---VNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMF 178 (851)
Q Consensus 114 lr~~F~~~D~-d~--G~Is~~El~~ll~~---l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~ 178 (851)
+-.+|.++|. ++ |.|+.+|++.++++ +|.+++.+++.++|+.+|.|++|.|+|+||+.++..+..
T Consensus 12 ~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~~ 82 (88)
T cd05029 12 LVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALAL 82 (88)
T ss_pred HHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHH
Confidence 3457888886 33 89999999999973 788899999999999999999999999999999887653
No 105
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.16 E-value=6.3e-06 Score=74.08 Aligned_cols=63 Identities=24% Similarity=0.287 Sum_probs=56.9
Q ss_pred HHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhh
Q psy8789 113 WLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIM 177 (851)
Q Consensus 113 wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~ 177 (851)
-++++|..+|.++ |.|+.+|++.+++.++ ++.+++.++|..+|.+++|.|+|+||+.++..+.
T Consensus 11 ~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~ 74 (96)
T smart00027 11 KYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIY 74 (96)
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence 4578999999999 9999999999999875 6788999999999999999999999999887654
No 106
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.16 E-value=5.6e-06 Score=74.13 Aligned_cols=63 Identities=17% Similarity=0.378 Sum_probs=56.1
Q ss_pred HHHHHhHhcC-CC--CeeeHHHHHHHHHh-----cCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhh
Q psy8789 114 LRKHFYSLEG-PR--ETVNLKDIKTFLPR-----VNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRI 176 (851)
Q Consensus 114 lr~~F~~~D~-d~--G~Is~~El~~ll~~-----l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l 176 (851)
++.+|..+|. |+ |.|+.+|++.+++. ++..++.+++..+|+++|.+++|.|+|+||+.++..+
T Consensus 10 l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 10 LILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred HHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 4679999986 73 99999999999986 5778899999999999999999999999999988754
No 107
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.12 E-value=7e-06 Score=65.24 Aligned_cols=50 Identities=24% Similarity=0.471 Sum_probs=47.7
Q ss_pred CeeeHHHHHHHHHhcCCC-CCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHh
Q psy8789 126 ETVNLKDIKTFLPRVNCK-MSTNKLREHFQEVDTRKTNELAFDEFSILYNR 175 (851)
Q Consensus 126 G~Is~~El~~ll~~l~~~-~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~ 175 (851)
|.|+.++++.+|..+|++ ++++++..+|..+|.+++|.|+|+||+.++..
T Consensus 3 G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 3 GKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 899999999999989999 99999999999999999999999999998864
No 108
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.11 E-value=6.3e-06 Score=79.97 Aligned_cols=61 Identities=18% Similarity=0.419 Sum_probs=53.3
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHH
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYN 174 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~ 174 (851)
++.+|..+|+|+ |.|++.|+...++.+|.+.+.+++..+++++|.|++|.|+|++|.+++.
T Consensus 94 l~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~ 155 (160)
T COG5126 94 LREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIK 155 (160)
T ss_pred HHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHh
Confidence 455888889888 9999999999999999999999999999999999999999999988764
No 109
>KOG0034|consensus
Probab=98.11 E-value=2.3e-05 Score=78.64 Aligned_cols=131 Identities=15% Similarity=0.206 Sum_probs=91.5
Q ss_pred HHHHHHhHhcCC-C-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCC-cCHHHHHHHHHhhhcccc---ccccc
Q psy8789 113 WLRKHFYSLEGP-R-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNE-LAFDEFSILYNRIMFDEQ---MFTDS 186 (851)
Q Consensus 113 wlr~~F~~~D~d-~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~-L~f~EF~~~~~~l~~r~~---~~~~~ 186 (851)
-|...|.++|.+ + |.|+.+|+..+. .+..++-.. +++..+|.+++|. |+|++|+.++.....+.. +..+.
T Consensus 34 ~L~~rF~kl~~~~~~g~lt~eef~~i~-~~~~Np~~~---rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~fa 109 (187)
T KOG0034|consen 34 RLYERFKKLDRNNGDGYLTKEEFLSIP-ELALNPLAD---RIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFA 109 (187)
T ss_pred HHHHHHHHhccccccCccCHHHHHHHH-HHhcCcHHH---HHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHH
Confidence 445678899998 6 999999999887 333343333 4555567777777 999999999877654322 22245
Q ss_pred cccc-cCCCCccCHHHHHHHHHHhcCcCcC-CHH----HHHHHHHHhccccccccCCCcccHHHHHHHHhCc
Q psy8789 187 YSHY-SSDGQTVTASELTNFLIREQNETNV-NER----EVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFSK 252 (851)
Q Consensus 187 f~~~-~~~~~~lt~~ef~~FL~~~Q~e~~~-s~~----~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S~ 252 (851)
|..| .++.|.|+.+||...+...-++... +++ -++.+|.++|.|.+ |.|+++||.+++.+.
T Consensus 110 F~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~D-----G~IsfeEf~~~v~~~ 176 (187)
T KOG0034|consen 110 FRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGD-----GKISFEEFCKVVEKQ 176 (187)
T ss_pred HHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCC-----CcCcHHHHHHHHHcC
Confidence 5555 4556679999999999876553322 233 35555667777766 899999999998764
No 110
>KOG3751|consensus
Probab=98.09 E-value=1.3e-06 Score=96.27 Aligned_cols=98 Identities=27% Similarity=0.518 Sum_probs=82.6
Q ss_pred CCCCCCCccCCCCCHHHHHHHhcCCC-CCCeEEEeecCCCCCceEEEEEeCCeeeEEEEEE---cCcE-EEeCC--cccC
Q psy8789 655 NQHEDKEWYHPTATRSQAEDLLRRVP-SDGAFLVRPSENDNSSYVISFRAEDKIKHCRIRV---EGRL-YTIGT--TQFE 727 (851)
Q Consensus 655 ~~~~~~~Wyhg~isR~eAe~lL~~~~-~~G~FLVR~s~~~~~~~~LSv~~~~~v~H~~I~~---~~~~-~~~~~--~~F~ 727 (851)
..+..+.||||.|+|+|+..++++.+ .+|.||+|.|.+.|..|++++...++|+|++|.. ++.. +.... +.|.
T Consensus 514 ~~h~sq~~~~~kis~~es~~~ikq~glv~~~~l~r~sqsnP~~~~~~~~~~~~v~~~~~~P~~~~~~~~~t~~~g~t~~s 593 (622)
T KOG3751|consen 514 AIHRSQTWFHGKISRDESQRLIKQQGLVDGLFLVRDSQSNPKIFVLSLCHPQKVKHFQILPVEDDGCTFFTLDDGPTKFS 593 (622)
T ss_pred hhcccccCcccccCchhhhhHHHhcccceeeeeecccccCcchhhhhccCCccccceEEecCCCCCceeeccCCCCcccc
Confidence 44778899999999999999999888 8999999999999999999999999999999998 3433 33332 3999
Q ss_pred CHHHHHHHhhhCCCccceeecCCCc
Q psy8789 728 SLVELISYYERHPLYKKIELWYPVS 752 (851)
Q Consensus 728 sl~eLV~~y~~~~l~~~~~L~~Pv~ 752 (851)
++.+||++|+-+.-.+++.|++.+.
T Consensus 594 d~~ql~~~~ql~k~~l~~al~~~~~ 618 (622)
T KOG3751|consen 594 DLIQLVEFYQLNKGVLPCALKHCCE 618 (622)
T ss_pred ccccccchhhcCCCcchHHHHHHHH
Confidence 9999999999997666776665443
No 111
>KOG3655|consensus
Probab=98.08 E-value=9.4e-07 Score=97.00 Aligned_cols=58 Identities=40% Similarity=0.751 Sum_probs=53.1
Q ss_pred CceEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCcccc
Q psy8789 783 ASITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEI 840 (851)
Q Consensus 783 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i 840 (851)
.+..++|+|||.|-+..|++|.++|+|++++..+.|||.|...++..|+||+|||+.+
T Consensus 426 ~~q~A~A~~dyqAAddtEisf~p~d~it~Id~vdegww~g~~pdG~~glfPaNyV~li 483 (484)
T KOG3655|consen 426 EPQTARALYDYQAADDTEISFDPPDAITLIDQVDEGWWTGQGPDGEVGLFPANYVELI 483 (484)
T ss_pred cCCCccccccccccCCcccccCCccccccccccCCccccccCCCCCcCcccccccccC
Confidence 4567999999999999999999999999999999999999987666699999999875
No 112
>KOG0027|consensus
Probab=98.03 E-value=9.9e-06 Score=79.27 Aligned_cols=63 Identities=19% Similarity=0.369 Sum_probs=59.7
Q ss_pred HHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHh
Q psy8789 113 WLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNR 175 (851)
Q Consensus 113 wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~ 175 (851)
=++++|..+|.|+ |.|+..|++++|..++.+.+..++..++.++|.|++|.++|+||+.++..
T Consensus 86 el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 86 ELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 5788999999999 99999999999999999999999999999999999999999999998753
No 113
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.03 E-value=1.2e-05 Score=64.57 Aligned_cols=60 Identities=25% Similarity=0.421 Sum_probs=55.7
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHH
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILY 173 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~ 173 (851)
++.+|..+|.++ |.|+.+|+..+++.++...+.+.+..+|+.+|.+++|.|+|+||..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 567899999988 999999999999999999999999999999999999999999998765
No 114
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.03 E-value=1.8e-05 Score=69.96 Aligned_cols=67 Identities=15% Similarity=0.210 Sum_probs=55.4
Q ss_pred HHHHHHHHhH-hcCCC--CeeeHHHHHHHHHhc-----CCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhc
Q psy8789 111 ERWLRKHFYS-LEGPR--ETVNLKDIKTFLPRV-----NCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMF 178 (851)
Q Consensus 111 ~~wlr~~F~~-~D~d~--G~Is~~El~~ll~~l-----~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~ 178 (851)
..| ..+|.. +|+++ +.|+.+|++.++.+. +-..+..++.++++++|.|++|.|+|+||+.++..+..
T Consensus 9 ~~l-~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~~ 83 (89)
T cd05023 9 ESL-IAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLAV 83 (89)
T ss_pred HHH-HHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence 344 458888 77766 499999999999874 34566788999999999999999999999999887753
No 115
>KOG3875|consensus
Probab=98.00 E-value=1.2e-06 Score=90.89 Aligned_cols=60 Identities=32% Similarity=0.418 Sum_probs=51.4
Q ss_pred eEEEEEEeecCCCCCCcccCCCCEEEEeEecC-----CCeEEEE-ECCceEEEecCCCccccCCCC
Q psy8789 785 ITVKALYDYQARNDDELSFPKHAIISNVTRAE-----GGWWRGD-YGGKRMHWFPSNYVAEIEPQH 844 (851)
Q Consensus 785 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~-----~gWw~g~-~~g~~~G~fP~nyv~~i~~~~ 844 (851)
..++|+|||.++++.||+|++||++.|..|.+ ..||... .+++..||||.|||+.+..++
T Consensus 269 ~~arA~YdF~a~np~ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NYvkIi~rq~ 334 (362)
T KOG3875|consen 269 EFARALYDFVARNPVELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINYVKIIGRQP 334 (362)
T ss_pred HHHHHHhhhhcCCHHHhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhhhhhhhcCC
Confidence 57999999999999999999999999998774 3588776 447767999999999987744
No 116
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=97.98 E-value=1.5e-05 Score=70.33 Aligned_cols=65 Identities=18% Similarity=0.384 Sum_probs=56.4
Q ss_pred HHHHHhHhcC--CC-CeeeHHHHHHHHHh-cCCC----CCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhc
Q psy8789 114 LRKHFYSLEG--PR-ETVNLKDIKTFLPR-VNCK----MSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMF 178 (851)
Q Consensus 114 lr~~F~~~D~--d~-G~Is~~El~~ll~~-l~~~----~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~ 178 (851)
++++|..+|. ++ |.|+.+|+..+++. ++.. ++..++..++..+|.+++|.|+|+||+.++..+..
T Consensus 10 l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~~~ 82 (88)
T cd00213 10 IIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKLAV 82 (88)
T ss_pred HHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHH
Confidence 5779999999 78 99999999999986 5543 45889999999999999999999999999887644
No 117
>PF14658 EF-hand_9: EF-hand domain
Probab=97.93 E-value=2.6e-05 Score=63.71 Aligned_cols=59 Identities=20% Similarity=0.391 Sum_probs=55.1
Q ss_pred HHhHhcCCC-CeeeHHHHHHHHHhcCC-CCCHHHHHHHHhhhcCCCC-CCcCHHHHHHHHHh
Q psy8789 117 HFYSLEGPR-ETVNLKDIKTFLPRVNC-KMSTNKLREHFQEVDTRKT-NELAFDEFSILYNR 175 (851)
Q Consensus 117 ~F~~~D~d~-G~Is~~El~~ll~~l~~-~~s~~~l~~~f~e~D~~~~-g~L~f~EF~~~~~~ 175 (851)
.|..+|.++ |.|.+++|+.+|+.++. .+++++|+.+.+++|.++. |.|+|+.|+..|+.
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 588999999 99999999999999998 8889999999999999987 99999999998864
No 118
>KOG1702|consensus
Probab=97.92 E-value=6.7e-06 Score=80.25 Aligned_cols=56 Identities=36% Similarity=0.662 Sum_probs=50.4
Q ss_pred ceEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEE--CCceEEEecCCCcccc
Q psy8789 784 SITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDY--GGKRMHWFPSNYVAEI 840 (851)
Q Consensus 784 ~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~--~g~~~G~fP~nyv~~i 840 (851)
+..++|.|||.|++.+|++|.-||.|..+...++||..|.+ .|.. |..|+||++.+
T Consensus 207 gktyra~ydysaqdedevsF~dgd~ivnvq~iddGWmygtv~rtg~t-GmlpaNyie~v 264 (264)
T KOG1702|consen 207 GKTYRAFYDYSAQDEDEVSFVDGDYIVNVQSIDDGWMYGTVVRTGWT-GMLPANYIEFV 264 (264)
T ss_pred CccchhhccCcccCcceeEEecCCeEEEEEeccCCceeeEEEecccc-CCCchhheeeC
Confidence 46899999999999999999999999999999999999975 4555 99999999864
No 119
>KOG0515|consensus
Probab=97.90 E-value=4.7e-06 Score=91.90 Aligned_cols=54 Identities=33% Similarity=0.701 Sum_probs=49.1
Q ss_pred EEEEEEeecCCCCCCcccCCCCEEEEeEecC---CCeEEEEECCceEEEecCCCcccc
Q psy8789 786 TVKALYDYQARNDDELSFPKHAIISNVTRAE---GGWWRGDYGGKRMHWFPSNYVAEI 840 (851)
Q Consensus 786 ~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~---~gWw~g~~~g~~~G~fP~nyv~~i 840 (851)
.+-|||||+++..|||+|..||-++|+.+++ ..||+++++|.. |++|.||+-..
T Consensus 685 ~vYAlwdYeaqf~DELsf~eGd~lTvirr~d~~eteWWwa~lng~e-GyVPRnylgLy 741 (752)
T KOG0515|consen 685 VVYALWDYEAQFEDELSFDEGDELTVIRRDDEVETEWWWARLNGEE-GYVPRNYLGLY 741 (752)
T ss_pred eeEEeecccccccccccccCCceeEEEecCCcchhhhhhHhhcCcc-cccchhhhhcC
Confidence 4789999999999999999999999998853 599999999987 99999999754
No 120
>KOG3697|consensus
Probab=97.89 E-value=1.5e-05 Score=81.85 Aligned_cols=100 Identities=24% Similarity=0.221 Sum_probs=81.2
Q ss_pred CCCCCCCccCCCCCCCHHHHHHHHhccCCCCCceEEeeec----------------------------------------
Q psy8789 496 ELHFGEKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRES---------------------------------------- 535 (851)
Q Consensus 496 ~~~~~~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S---------------------------------------- 535 (851)
+.....+||||.++ |..+++.|. ++|.|++|.+
T Consensus 196 d~p~k~pp~~g~l~--~~~~q~~l~-----~~a~~~a~~~~~~p~~~~ls~l~~~n~ppp~~p~~kl~~~~~~~n~~~~~ 268 (345)
T KOG3697|consen 196 DIPSKMPPPGGFLD--TRLKQRPLA-----PDAAQFAGKEQTYPQGRHLSDLRQGNSPPPSTPEGKLHVAPTYVNTQQIP 268 (345)
T ss_pred cccccCCCCCCccc--hhhhhccCC-----cccchhhhhccCCcccccccchhhcCCCCCCCCCccCCCCcccccccccc
Confidence 34456899999999 999998886 4788888854
Q ss_pred -------CCCCCcEEEEEEeCCeeeEEEEeeecCCCcEEeccCceecChHHHHHHHhhcCCC--CCcceeEecCCCCCC
Q psy8789 536 -------ETFIGDYSLSFWWQGRVNHCRIRSKPESGQFYLVEKSYFDSLYSLISHYRTNHLR--SQEFLITLQEPVPQP 605 (851)
Q Consensus 536 -------~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~~~~F~sl~eLI~~y~~~~l~--~~gl~~~L~~p~~~~ 605 (851)
.+.+|.|+|+=..+++.||..+. +..|. .....+.|+|+.-||+||..++|+ +.|....|..|+.++
T Consensus 269 ~rd~~~~~~~~gqyvltgl~~~~~khlllv--dpegv-vrtkd~~fdsishli~yh~~~~lpiis~~sel~l~~pv~r~ 344 (345)
T KOG3697|consen 269 RRDLFDETTTPGQYVLTGLQSGQPKHLLLV--DPEGV-VRTKDRRFDSISHLINYHMDNHLPIISAGSELCLQQPVERK 344 (345)
T ss_pred hhhhccccCCCccEEEecccCCCcceEEEE--CCccc-eecccchhhHHHHHHHHhhhccCceecCcchhhhhCccccc
Confidence 35678899999999999999884 45554 344568999999999999999987 588889999998764
No 121
>PLN02964 phosphatidylserine decarboxylase
Probab=97.86 E-value=4.9e-05 Score=89.54 Aligned_cols=93 Identities=19% Similarity=0.182 Sum_probs=74.2
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHHHhcC-CCCCHHH---HHHHHhhhcCCCCCCcCHHHHHHHHHhhhcccc--ccccc
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFLPRVN-CKMSTNK---LREHFQEVDTRKTNELAFDEFSILYNRIMFDEQ--MFTDS 186 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll~~l~-~~~s~~~---l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~--~~~~~ 186 (851)
++++|..+|.|+ |.| +..+++.++ ..+++.+ +.++|+.+|.|++|.|+|+||+.++..+..... .....
T Consensus 145 lkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~ea 220 (644)
T PLN02964 145 ACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEEL 220 (644)
T ss_pred HHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHHHH
Confidence 477899999999 987 888899999 5888776 789999999999999999999999987643211 11234
Q ss_pred cc-cccCCCCccCHHHHHHHHHHhc
Q psy8789 187 YS-HYSSDGQTVTASELTNFLIREQ 210 (851)
Q Consensus 187 f~-~~~~~~~~lt~~ef~~FL~~~Q 210 (851)
|. .+.++++.|+.+||++.|...+
T Consensus 221 Fk~fDkDgdG~Is~dEL~~vL~~~~ 245 (644)
T PLN02964 221 FKAADLNGDGVVTIDELAALLALQQ 245 (644)
T ss_pred HHHhCCCCCCcCCHHHHHHHHHhcc
Confidence 44 5667778999999999998743
No 122
>KOG0028|consensus
Probab=97.82 E-value=4.1e-05 Score=72.74 Aligned_cols=61 Identities=16% Similarity=0.348 Sum_probs=34.4
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHH
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYN 174 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~ 174 (851)
++.+|..+|.|+ |+||..+++.+.+.||-+.+.+++.+++.++|.+++|.|+-+||..+++
T Consensus 108 i~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk 169 (172)
T KOG0028|consen 108 IKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMK 169 (172)
T ss_pred HHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHh
Confidence 344555555555 5555555555555555555555555555555555555555555555543
No 123
>KOG3697|consensus
Probab=97.82 E-value=1.8e-05 Score=81.37 Aligned_cols=94 Identities=17% Similarity=0.128 Sum_probs=78.3
Q ss_pred CCCCccCCCCCHHHHHHHhcCCCCCCeEEEeec-----------------------------------------------
Q psy8789 658 EDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPS----------------------------------------------- 690 (851)
Q Consensus 658 ~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s----------------------------------------------- 690 (851)
...+||+|.++++++++.|.. +|.|++|.+
T Consensus 199 ~k~pp~~g~l~~~~~q~~l~~---~a~~~a~~~~~~p~~~~ls~l~~~n~ppp~~p~~kl~~~~~~~n~~~~~~rd~~~~ 275 (345)
T KOG3697|consen 199 SKMPPPGGFLDTRLKQRPLAP---DAAQFAGKEQTYPQGRHLSDLRQGNSPPPSTPEGKLHVAPTYVNTQQIPRRDLFDE 275 (345)
T ss_pred ccCCCCCCccchhhhhccCCc---ccchhhhhccCCcccccccchhhcCCCCCCCCCccCCCCcccccccccchhhhccc
Confidence 356899999999999999987 778887754
Q ss_pred CCCCCceEEEEEeCCeeeEEEEEEcCcEEEeCCcccCCHHHHHHHhhhCCCcc-----ceeecCCCcHh
Q psy8789 691 ENDNSSYVISFRAEDKIKHCRIRVEGRLYTIGTTQFESLVELISYYERHPLYK-----KIELWYPVSED 754 (851)
Q Consensus 691 ~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~~~~~~F~sl~eLV~~y~~~~l~~-----~~~L~~Pv~~~ 754 (851)
...+|.|+|+=...+..+|.++....|...-.+..|+|+..||.||..+.++. ...|..||.|+
T Consensus 276 ~~~~gqyvltgl~~~~~khlllvdpegvvrtkd~~fdsishli~yh~~~~lpiis~~sel~l~~pv~r~ 344 (345)
T KOG3697|consen 276 TTTPGQYVLTGLQSGQPKHLLLVDPEGVVRTKDRRFDSISHLINYHMDNHLPIISAGSELCLQQPVERK 344 (345)
T ss_pred cCCCccEEEecccCCCcceEEEECCccceecccchhhHHHHHHHHhhhccCceecCcchhhhhCccccc
Confidence 34578899999999999999888766666666779999999999999999776 45688888865
No 124
>KOG1843|consensus
Probab=97.77 E-value=1.1e-05 Score=86.78 Aligned_cols=55 Identities=33% Similarity=0.680 Sum_probs=50.5
Q ss_pred ceEEEEEEeecCCCCCCcccCCCCEEEEeEecC--CCeEEEEECCceEEEecCCCccc
Q psy8789 784 SITVKALYDYQARNDDELSFPKHAIISNVTRAE--GGWWRGDYGGKRMHWFPSNYVAE 839 (851)
Q Consensus 784 ~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~--~gWw~g~~~g~~~G~fP~nyv~~ 839 (851)
+..+.|+|+|.++.+++|+|++||+|+++.+.+ +.||+|+.++.. |+||+|||+.
T Consensus 416 ~n~a~a~ysfage~~GDl~f~kgDii~il~ks~s~~dwwtgr~~~~e-gifPanyv~~ 472 (473)
T KOG1843|consen 416 PNIATALYSFAGEQPGDLSFQKGDIITILKKSDSANDWWTGRGNGYE-GIFPANYVSL 472 (473)
T ss_pred cceeeeeehhccCCCCCcccccCceEEEecCCcchhhHHHhhccccc-cccccceecc
Confidence 457999999999999999999999999998875 599999999998 9999999964
No 125
>KOG4223|consensus
Probab=97.70 E-value=7.5e-05 Score=79.02 Aligned_cols=134 Identities=16% Similarity=0.265 Sum_probs=94.3
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhh-c----c-cccc---
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIM-F----D-EQMF--- 183 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~-~----r-~~~~--- 183 (851)
+..++..+|.++ |.|+.+|++.-+...-.+--..+..+.+.+.|.|++|.|+|+|+...+-... . . .+..
T Consensus 79 l~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e~~~~~ 158 (325)
T KOG4223|consen 79 LGKLVPKIDSDSDGFVTESELKAWIMQSQKKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEEDNEEY 158 (325)
T ss_pred HHHHHhhhcCCCCCceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccchhcHHH
Confidence 456888999888 9999999988766543333344556778899999999999999986432210 0 0 0000
Q ss_pred -------ccccc-cccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhCcC
Q psy8789 184 -------TDSYS-HYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFSKQ 253 (851)
Q Consensus 184 -------~~~f~-~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S~~ 253 (851)
...|. .+.++++.+|.+||..||.-+-. +.+.+--|++-+...++|++ |.|+++||+.=|+|..
T Consensus 159 ~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~-p~M~~iVi~Etl~d~Dkn~D-----G~I~~eEfigd~~~~~ 230 (325)
T KOG4223|consen 159 KKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEH-PHMKDIVIAETLEDIDKNGD-----GKISLEEFIGDLYSHE 230 (325)
T ss_pred HHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhc-chHHHHHHHHHHhhcccCCC-----CceeHHHHHhHHhhcc
Confidence 02233 55667788999999999986542 22333456667777777777 9999999999999876
No 126
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.63 E-value=0.00012 Score=64.66 Aligned_cols=63 Identities=19% Similarity=0.366 Sum_probs=52.4
Q ss_pred HHHHhHhcCC--C-CeeeHHHHHHHHH-hcCCCCC----HHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhh
Q psy8789 115 RKHFYSLEGP--R-ETVNLKDIKTFLP-RVNCKMS----TNKLREHFQEVDTRKTNELAFDEFSILYNRIM 177 (851)
Q Consensus 115 r~~F~~~D~d--~-G~Is~~El~~ll~-~l~~~~s----~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~ 177 (851)
...|..++.+ . |.|+.+|++.+|. .++-.++ ..++..+|+.+|.+++|.|+|+||+.++..+.
T Consensus 11 ~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~ 81 (88)
T cd05030 11 INVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVG 81 (88)
T ss_pred HHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 3467777654 2 8999999999997 5555555 88999999999999999999999999987764
No 127
>KOG0041|consensus
Probab=97.62 E-value=0.00012 Score=71.87 Aligned_cols=65 Identities=18% Similarity=0.375 Sum_probs=59.8
Q ss_pred HHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhh
Q psy8789 113 WLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIM 177 (851)
Q Consensus 113 wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~ 177 (851)
.+..+|.++|.+. |.|++-|++.+|.+||.+-+.--++++++++|.|.+|+|+|-||+-+|+...
T Consensus 100 ~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrkaa 165 (244)
T KOG0041|consen 100 DAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAA 165 (244)
T ss_pred HHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHh
Confidence 3566899999999 9999999999999999999998999999999999999999999999998643
No 128
>KOG4223|consensus
Probab=97.61 E-value=0.00019 Score=76.03 Aligned_cols=128 Identities=14% Similarity=0.257 Sum_probs=90.1
Q ss_pred HHHHHHhHhcCCC-CeeeHHHHHHHHHhc-CCCCCHHHHHHHHhhhcCCCCCCcCHHHHHH-HHHhhhccccccc-----
Q psy8789 113 WLRKHFYSLEGPR-ETVNLKDIKTFLPRV-NCKMSTNKLREHFQEVDTRKTNELAFDEFSI-LYNRIMFDEQMFT----- 184 (851)
Q Consensus 113 wlr~~F~~~D~d~-G~Is~~El~~ll~~l-~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~-~~~~l~~r~~~~~----- 184 (851)
|-++.|..+|.|+ |.++.+|+..+|.-= +-.+..--+++-+.+.|+|++|.|+++||+. +|..-...++...
T Consensus 164 rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~Er 243 (325)
T KOG4223|consen 164 RDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLTER 243 (325)
T ss_pred HHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcccccccH
Confidence 5577899999999 999999999987432 2223333445778899999999999999996 6654321111111
Q ss_pred cccc--cccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHH
Q psy8789 185 DSYS--HYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFID 247 (851)
Q Consensus 185 ~~f~--~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~ 247 (851)
..|. .+.+++|+|+.+|++.++.-. +......++.-|+.+.+.|.+ +.||++|-+.
T Consensus 244 e~F~~~~DknkDG~L~~dEl~~WI~P~--~~d~A~~EA~hL~~eaD~dkD-----~kLs~eEIl~ 301 (325)
T KOG4223|consen 244 EQFFEFRDKNKDGKLDGDELLDWILPS--EQDHAKAEARHLLHEADEDKD-----GKLSKEEILE 301 (325)
T ss_pred HHHHHHhhcCCCCccCHHHHhcccCCC--CccHHHHHHHHHhhhhccCcc-----ccccHHHHhh
Confidence 2233 567788899999999887521 122234678889888887777 7899998643
No 129
>KOG0037|consensus
Probab=97.59 E-value=0.00019 Score=72.08 Aligned_cols=60 Identities=17% Similarity=0.293 Sum_probs=31.8
Q ss_pred HHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHH
Q psy8789 115 RKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYN 174 (851)
Q Consensus 115 r~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~ 174 (851)
+++|..+|.|+ |+|+..||+..|..+|+.++..-..-++++.|...+|.|.||+|+..+-
T Consensus 127 r~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv 187 (221)
T KOG0037|consen 127 RNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCV 187 (221)
T ss_pred HHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHH
Confidence 44555555555 5555555555555555555555444555555543455555555555443
No 130
>KOG3523|consensus
Probab=97.58 E-value=1e-05 Score=90.97 Aligned_cols=61 Identities=30% Similarity=0.654 Sum_probs=54.7
Q ss_pred ceEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEE-ECCceEEEecCCCccccCCCC
Q psy8789 784 SITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGD-YGGKRMHWFPSNYVAEIEPQH 844 (851)
Q Consensus 784 ~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~-~~g~~~G~fP~nyv~~i~~~~ 844 (851)
.+++.++..|.+..++||++..+|++.|+.+.++||..|+ +.++.+||||..||++|.+..
T Consensus 608 cpQv~~~~sy~a~q~Del~Le~~Dvv~v~~k~~DGWl~GeRl~Dge~GWFP~~~veeI~~~~ 669 (695)
T KOG3523|consen 608 CPQVQCVHSYKAKQPDELTLELADVVNVLQKTPDGWLEGERLRDGERGWFPSSYVEEITNPH 669 (695)
T ss_pred CChhheeeccccCCCceeeeehhhhhhhhhcCCCccccccccccCccCcchHHHHHHhcCHH
Confidence 3578889999999999999999999999999999999996 667777999999999987643
No 131
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=97.57 E-value=0.00011 Score=60.78 Aligned_cols=66 Identities=18% Similarity=0.390 Sum_probs=49.6
Q ss_pred HHHHHHhhhcCCCCCCcCHHHHHHHHHhhhccccccccccccccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHh
Q psy8789 148 KLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQMFTDSYSHYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDY 227 (851)
Q Consensus 148 ~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~~~~f~~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~ 227 (851)
+++++|+.+|.|++|.|+.+||..+++.+.... + . ...++.++.+++.+
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~-----------------~---------~-----~~~~~~~~~~~~~~ 49 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDM-----------------S---------D-----EESDEMIDQIFREF 49 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHS-----------------T---------H-----HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccc-----------------c---------H-----HHHHHHHHHHHHHh
Confidence 467889999999999999999999887753321 1 0 01234677889999
Q ss_pred ccccccccCCCcccHHHHHHHH
Q psy8789 228 LQDEQRNVQEPYFTFMEFIDFL 249 (851)
Q Consensus 228 d~d~~~~~~~g~ls~deF~~fL 249 (851)
+++.+ |.|+++||..++
T Consensus 50 D~d~d-----G~i~~~Ef~~~~ 66 (66)
T PF13499_consen 50 DTDGD-----GRISFDEFLNFM 66 (66)
T ss_dssp TTTSS-----SSEEHHHHHHHH
T ss_pred CCCCc-----CCCcHHHHhccC
Confidence 88876 899999999875
No 132
>PTZ00183 centrin; Provisional
Probab=97.51 E-value=0.00024 Score=69.54 Aligned_cols=97 Identities=5% Similarity=0.184 Sum_probs=71.2
Q ss_pred HHHHHHHhHhcCCC-CeeeHHHHHHHHHhc-CCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcc--cccccccc
Q psy8789 112 RWLRKHFYSLEGPR-ETVNLKDIKTFLPRV-NCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFD--EQMFTDSY 187 (851)
Q Consensus 112 ~wlr~~F~~~D~d~-G~Is~~El~~ll~~l-~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r--~~~~~~~f 187 (851)
..+..+|..+|.++ |.|+++|...++... ........++.+|+.+|.+++|.|+.+||..++..+-.. .......|
T Consensus 53 ~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~ 132 (158)
T PTZ00183 53 EEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMI 132 (158)
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 35677888899988 999999998877653 344566788899999999999999999999988754211 11111223
Q ss_pred c-cccCCCCccCHHHHHHHHHH
Q psy8789 188 S-HYSSDGQTVTASELTNFLIR 208 (851)
Q Consensus 188 ~-~~~~~~~~lt~~ef~~FL~~ 208 (851)
. .+.++.+.|+.++|..++..
T Consensus 133 ~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 133 DEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred HHhCCCCCCcCcHHHHHHHHhc
Confidence 3 34455677999999998864
No 133
>PTZ00184 calmodulin; Provisional
Probab=97.49 E-value=0.00029 Score=68.04 Aligned_cols=95 Identities=11% Similarity=0.191 Sum_probs=56.7
Q ss_pred HHHHHHhHhcCCC-CeeeHHHHHHHHHhc-CCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcc--ccccccccc
Q psy8789 113 WLRKHFYSLEGPR-ETVNLKDIKTFLPRV-NCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFD--EQMFTDSYS 188 (851)
Q Consensus 113 wlr~~F~~~D~d~-G~Is~~El~~ll~~l-~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r--~~~~~~~f~ 188 (851)
.++.+|..+|.++ |.|++++...++... ........+..+|+.+|.+++|.|+.+||..++..+-.. .+.....+.
T Consensus 48 ~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~ 127 (149)
T PTZ00184 48 ELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIR 127 (149)
T ss_pred HHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHH
Confidence 5566677777776 777777777666542 333344556677777777777777777777776553211 111112222
Q ss_pred -cccCCCCccCHHHHHHHHH
Q psy8789 189 -HYSSDGQTVTASELTNFLI 207 (851)
Q Consensus 189 -~~~~~~~~lt~~ef~~FL~ 207 (851)
.+.++.+.|+.+||..++.
T Consensus 128 ~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 128 EADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred hcCCCCCCcCcHHHHHHHHh
Confidence 3344556677777777664
No 134
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.46 E-value=0.00031 Score=65.12 Aligned_cols=56 Identities=14% Similarity=0.325 Sum_probs=46.4
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHH
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILY 173 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~ 173 (851)
++-.|..+|.|+ |.|+.+||..++ ....+..+..+|+.+|.|++|.|+++||...+
T Consensus 50 l~w~F~~lD~d~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 50 VGWMFNQLDGNYDGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 344788899999 999999999876 23446677789999999999999999999887
No 135
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.46 E-value=0.00046 Score=60.54 Aligned_cols=64 Identities=13% Similarity=0.331 Sum_probs=51.6
Q ss_pred HHHHhHhcCCCCeeeHHHHHHHHHh-c----CCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhc
Q psy8789 115 RKHFYSLEGPRETVNLKDIKTFLPR-V----NCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMF 178 (851)
Q Consensus 115 r~~F~~~D~d~G~Is~~El~~ll~~-l----~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~ 178 (851)
..+|..+-.++++|+.+|++.||.+ | .-......+.++|+..|.|++|.|+|.||..++..++.
T Consensus 11 I~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~~ 79 (91)
T cd05024 11 MLTFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLLI 79 (91)
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 3467777644589999999999964 3 33345678889999999999999999999999988754
No 136
>KOG2222|consensus
Probab=97.43 E-value=2.1e-05 Score=85.58 Aligned_cols=59 Identities=34% Similarity=0.728 Sum_probs=54.2
Q ss_pred ceEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCccccCCC
Q psy8789 784 SITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEIEPQ 843 (851)
Q Consensus 784 ~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i~~~ 843 (851)
...++||.||...+.+||.|+++|+|+|++.-+...|.|+++|-+ ||||+.||+.++..
T Consensus 548 ~krakal~df~r~dddelgfrkndiitiisekdehcwvgelnglr-gwfpakfvellder 606 (848)
T KOG2222|consen 548 AKRAKALHDFAREDDDELGFRKNDIITIISEKDEHCWVGELNGLR-GWFPAKFVELLDER 606 (848)
T ss_pred hHHHHHHhhhhhccccccccccccEEEEeecCCcceeeecccccc-ccchHHHHHHHHhc
Confidence 456899999999999999999999999999888999999999998 99999999987653
No 137
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=97.37 E-value=0.00048 Score=64.82 Aligned_cols=63 Identities=19% Similarity=0.306 Sum_probs=48.2
Q ss_pred ccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHhh
Q psy8789 27 AKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLVP 99 (851)
Q Consensus 27 ~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~~ 99 (851)
..+.+.|++|.+|..|.....+.. + ++.+++|++.... .+|+|+|+|.+++++|++||++|+.
T Consensus 60 ~~~~i~I~~v~~V~~~~~~~~~~~------~--~~~~~si~i~t~~--R~L~l~a~s~~~~~~W~~aL~~L~~ 122 (123)
T PF12814_consen 60 KAKSIRIESVTEVKDGNPSPPGLK------K--PDHNKSIIIVTPD--RSLDLTAPSRERHEIWFNALRYLLQ 122 (123)
T ss_pred cccceEEeeeEEecCCCCCCcccc------c--cccceEEEEEcCC--eEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 345799999999999988766551 1 1244455544433 6999999999999999999999985
No 138
>KOG1856|consensus
Probab=97.34 E-value=0.0018 Score=78.21 Aligned_cols=174 Identities=19% Similarity=0.366 Sum_probs=120.1
Q ss_pred CCCCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEe-CCeeeEEEEeeecCCCcEEe-----ccCc
Q psy8789 499 FGEKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWW-QGRVNHCRIRSKPESGQFYL-----VEKS 572 (851)
Q Consensus 499 ~~~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~-~~~v~H~~I~~~~~~g~~~~-----~~~~ 572 (851)
-.+|-|| +++ -++||..|... ..|.++||.|.......|++++. .+-..|+.|+-....+.|.+ .++.
T Consensus 1106 I~HP~F~-n~n--~eQAe~yL~~~---d~ge~iiRpSSrgddhLvvtwKVsD~iYqhidV~E~eKEn~fslg~~l~i~~e 1179 (1299)
T KOG1856|consen 1106 IAHPLFK-NLN--AEQAEAYLSDM---DQGELIIRPSSRGDDHLVVTWKVSDGIYQHIDVQELEKENYFSLGKTLWIGGE 1179 (1299)
T ss_pred hcCcccc-CCC--HHHHHHHHHhc---ccccEEeccccCCCCceEEEEEecCchhhhhhhhhhhccccccccceEEECCc
Confidence 4568888 788 79999999985 79999999996665557777775 45568888863222222332 2457
Q ss_pred eecChHHHHHHHhhcCCCCCcceeEecCCCCCCCCccccccccccccchhhhhhhhcccCCCceeeecCCCCCCCCCCCC
Q psy8789 573 YFDSLYSLISHYRTNHLRSQEFLITLQEPVPQPNQHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYEPVP 652 (851)
Q Consensus 573 ~F~sl~eLI~~y~~~~l~~~gl~~~L~~p~~~~~~~~~~~~~~~~l~~~~ae~~l~~v~~dG~flvr~~~~~~~~~~p~~ 652 (851)
.|..|.|+|.-|-+.-+. . +.++ .
T Consensus 1180 ~feDLDEiI~r~vqpm~~------~-------------------------~~em----~--------------------- 1203 (1299)
T KOG1856|consen 1180 EFEDLDEIIARYVQPMAT------N-------------------------LREM----T--------------------- 1203 (1299)
T ss_pred ccccHHHHHHHHHHHHHH------H-------------------------HHHH----H---------------------
Confidence 999999999988754310 0 0000 0
Q ss_pred CCCCCCCCCccCCCCCHHHHHHHhcCC-CCCCe---EEEeecCCCCCceEEEEEeCCeeeEEEEEEcCcEEEeCCcccCC
Q psy8789 653 QPNQHEDKEWYHPTATRSQAEDLLRRV-PSDGA---FLVRPSENDNSSYVISFRAEDKIKHCRIRVEGRLYTIGTTQFES 728 (851)
Q Consensus 653 ~~~~~~~~~Wyhg~isR~eAe~lL~~~-~~~G~---FLVR~s~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~~~~~~F~s 728 (851)
...+|. .=++++.|++|... ...+. |..=-|-..||.|.||++.+.+++|--+.-....|.+.+..|+|
T Consensus 1204 ------nhkyf~-~Gt~~~~ek~L~~~k~~np~~~~Y~F~~s~~~PG~F~L~y~~~~k~~heyv~v~p~g~~~rg~~f~t 1276 (1299)
T KOG1856|consen 1204 ------NHKYFF-TGTKKEVEKLLRDYKKVNPKKSVYFFCASHEHPGKFCLSYKPSSKPRHEYVKVVPEGFRFRGQNFGT 1276 (1299)
T ss_pred ------hhhHhh-cCCHHHHHHHHHHHhccCCCeeeEEEEecccCCceEEEEeccCCCccceeEEEcccceEEecccchh
Confidence 012233 12377788877632 12333 33345667799999999999999999888866668888899999
Q ss_pred HHHHHHHhhhCCC
Q psy8789 729 LVELISYYERHPL 741 (851)
Q Consensus 729 l~eLV~~y~~~~l 741 (851)
+.+|..+++.+-.
T Consensus 1277 ld~L~~~FK~h~~ 1289 (1299)
T KOG1856|consen 1277 LDELCRWFKRHYK 1289 (1299)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999987643
No 139
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.34 E-value=0.0002 Score=49.04 Aligned_cols=29 Identities=28% Similarity=0.655 Sum_probs=24.1
Q ss_pred HHHHHHhhhcCCCCCCcCHHHHHHHHHhh
Q psy8789 148 KLREHFQEVDTRKTNELAFDEFSILYNRI 176 (851)
Q Consensus 148 ~l~~~f~e~D~~~~g~L~f~EF~~~~~~l 176 (851)
+++++|+.+|+|++|.|+|+||..+++.|
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 46788889999999999999998888754
No 140
>KOG0044|consensus
Probab=97.32 E-value=0.00053 Score=69.00 Aligned_cols=98 Identities=12% Similarity=0.106 Sum_probs=75.1
Q ss_pred HHHHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhc--c----cccc
Q psy8789 111 ERWLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMF--D----EQMF 183 (851)
Q Consensus 111 ~~wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~--r----~~~~ 183 (851)
+.+...+|..+|+|+ |.|++.|+..++..+--...++.+.=.|+.+|.|++|.|+.+|+..+++.+.. . ++..
T Consensus 63 ~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~ 142 (193)
T KOG0044|consen 63 SKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDE 142 (193)
T ss_pred HHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCccc
Confidence 457788999999999 99999997777776655666778887899999999999999999998765321 1 1000
Q ss_pred -------ccccc-cccCCCCccCHHHHHHHHHH
Q psy8789 184 -------TDSYS-HYSSDGQTVTASELTNFLIR 208 (851)
Q Consensus 184 -------~~~f~-~~~~~~~~lt~~ef~~FL~~ 208 (851)
...|. .+.++++.+|.+||.++...
T Consensus 143 ~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 143 ETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred ccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 12333 67778889999999988753
No 141
>KOG4429|consensus
Probab=97.19 E-value=0.00029 Score=72.58 Aligned_cols=55 Identities=29% Similarity=0.254 Sum_probs=51.5
Q ss_pred eEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCcccc
Q psy8789 785 ITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEI 840 (851)
Q Consensus 785 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i 840 (851)
..|.++|+|++...+||....||+.++-++.+.|||.|++.|.. |-||+.||++.
T Consensus 364 ~lcdafYSfqarqddel~~e~gditif~Ekkeeg~~f~rl~gd~-~hf~Aa~iEea 418 (421)
T KOG4429|consen 364 ILCDAFYSFQARQDDELGGEIGDITIFDEKKEEGPTFCRLLGDF-EHFHAAEIEEA 418 (421)
T ss_pred HHhhhhhccccccccccCCcccceeeecCcccCCCceeeecccc-CCCcHHHHHHh
Confidence 46899999999999999999999999999999999999999987 99999999875
No 142
>KOG4773|consensus
Probab=97.18 E-value=5.3e-05 Score=80.15 Aligned_cols=60 Identities=18% Similarity=0.385 Sum_probs=56.1
Q ss_pred eEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCccccCCCCC
Q psy8789 785 ITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEIEPQHN 845 (851)
Q Consensus 785 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i~~~~~ 845 (851)
+.+.|++||.+....||.|.+||++.++.+++.+||.|+..+.+ ||+|..|++.++..++
T Consensus 176 q~~~a~~df~gns~~EL~l~agdV~~~~~r~ek~W~~gk~R~~~-g~yp~sF~~~ld~fpe 235 (386)
T KOG4773|consen 176 QRAEASFDFPGNSKLELNLVAGDVEFLLSRDEKYWLLGKVRGLT-GYYPDSFVKQLDDFPE 235 (386)
T ss_pred HHHHhhccCCCCccceeeeehhhHHHHHhhcccceeeeeecccc-ccccHHhhhhhccCcc
Confidence 56889999999999999999999999999999999999999998 9999999999977665
No 143
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.06 E-value=0.0012 Score=52.38 Aligned_cols=52 Identities=27% Similarity=0.448 Sum_probs=43.1
Q ss_pred CCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhC
Q psy8789 194 GQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFS 251 (851)
Q Consensus 194 ~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S 251 (851)
++.|+.++|+.+|...+ ....+++++..|+..+|.+.+ |.|++++|+.+|.+
T Consensus 2 ~G~i~~~~~~~~l~~~g-~~~~s~~e~~~l~~~~D~~~~-----G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 2 DGKITREEFRRALSKLG-IKDLSEEEVDRLFREFDTDGD-----GYISFDEFISMMQR 53 (54)
T ss_dssp SSEEEHHHHHHHHHHTT-SSSSCHHHHHHHHHHHTTSSS-----SSEEHHHHHHHHHH
T ss_pred cCEECHHHHHHHHHHhC-CCCCCHHHHHHHHHhcccCCC-----CCCCHHHHHHHHHh
Confidence 46899999999995543 222788899999999998877 89999999999853
No 144
>KOG0038|consensus
Probab=97.01 E-value=0.0045 Score=57.89 Aligned_cols=115 Identities=17% Similarity=0.275 Sum_probs=78.1
Q ss_pred CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcccc---ccccccccc-cCCCCccCHHH
Q psy8789 126 ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQ---MFTDSYSHY-SSDGQTVTASE 201 (851)
Q Consensus 126 G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~---~~~~~f~~~-~~~~~~lt~~e 201 (851)
-+++++.|.++ ..|.-+.=+..+-+.|.+ |+.|.|+|+.|+.++.-++.-.. +....|..| -++++.|-..+
T Consensus 54 v~vp~e~i~kM-PELkenpfk~ri~e~FSe---DG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~D 129 (189)
T KOG0038|consen 54 VKVPFELIEKM-PELKENPFKRRICEVFSE---DGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDD 129 (189)
T ss_pred eeecHHHHhhC-hhhhcChHHHHHHHHhcc---CCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHH
Confidence 46888888765 444444445555566654 78899999999999876653211 111334444 35667899999
Q ss_pred HHHHHHHhcCcCcCCHHHH----HHHHHHhccccccccCCCcccHHHHHHHHh
Q psy8789 202 LTNFLIREQNETNVNEREV----SRHMRDYLQDEQRNVQEPYFTFMEFIDFLF 250 (851)
Q Consensus 202 f~~FL~~~Q~e~~~s~~~~----~~li~~~d~d~~~~~~~g~ls~deF~~fL~ 250 (851)
|..-|...-++. ++++++ +.+|.+.+.|++ |.|++.+|-.+++
T Consensus 130 L~~~l~~lTr~e-Ls~eEv~~i~ekvieEAD~DgD-----gkl~~~eFe~~i~ 176 (189)
T KOG0038|consen 130 LEKTLTSLTRDE-LSDEEVELICEKVIEEADLDGD-----GKLSFAEFEHVIL 176 (189)
T ss_pred HHHHHHHHhhcc-CCHHHHHHHHHHHHHHhcCCCC-----CcccHHHHHHHHH
Confidence 999998887765 566554 445555555555 8999999988765
No 145
>KOG1451|consensus
Probab=96.94 E-value=0.00095 Score=75.03 Aligned_cols=55 Identities=42% Similarity=0.669 Sum_probs=50.0
Q ss_pred eEEEEEEeecCCCCCCcccCCCCEEEEeE-ecCCCeEEEEECCceEEEecCCCcccc
Q psy8789 785 ITVKALYDYQARNDDELSFPKHAIISNVT-RAEGGWWRGDYGGKRMHWFPSNYVAEI 840 (851)
Q Consensus 785 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~-~~~~gWw~g~~~g~~~G~fP~nyv~~i 840 (851)
..+.++|...+....+++|.+|.++..+. ..++||..|+++|+. |++|+|||+++
T Consensus 757 rk~k~lyAc~a~h~selsf~~gt~f~nv~~S~e~Gwl~GtLnGkt-glip~nyve~l 812 (812)
T KOG1451|consen 757 RRVKTLYACTADHHSELSFEPGTIFTNVYESNEDGWLVGTLNGKT-GLIPSNYVEPL 812 (812)
T ss_pred ccccceeccCCCCcccccccCcceeeeecccCCCCceeeecCCCc-ccCcccccCcC
Confidence 46889999999999999999999999876 557899999999998 99999999874
No 146
>cd08622 PI-PLCXDc_CG14945_like Catalytic domain of Drosophila melanogaster CG14945-like proteins similar to phosphatidylinositol-specific phospholipase C, X domain containing. This subfamily corresponds to the catalytic domain present in uncharacterized metazoan Drosophila melanogaster CG14945-like proteins, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI
Probab=96.85 E-value=0.0051 Score=66.28 Aligned_cols=128 Identities=16% Similarity=0.179 Sum_probs=89.6
Q ss_pred CCccccccccccCCccccCCccc-cCCCH--------HHHHHHHhcCccEEEEeeecCC--CCCceEeecCCceeeeehH
Q psy8789 269 TKPLSHYFINSSHNTYLTGDQFS-SESSC--------EAYVRCLRQGCRCIELDCWDGP--DGTPIVYHGHTLTTKIKFK 337 (851)
Q Consensus 269 ~~pl~~Y~i~sshntyl~~~q~~-~~ss~--------~~y~~~l~~gcRcveld~wdg~--~~~p~v~hg~t~t~~i~~~ 337 (851)
+.||++=.|--|||+.-.+-... +.+-+ .....-|..|.|.+.|.|.-.+ +++-.++||-. +-.+|.
T Consensus 6 ~~~l~~l~iPGtHdS~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiRylDlRv~~~~~~~~~~~~~Hg~~--~~~~l~ 83 (276)
T cd08622 6 NLRIKDLFIPGTHNSAAYDTNSNANESLVDKYLLTQDLDIWTQLVHGIRYLDLRVGYYPDSPDNFWINHDLV--RIVPLL 83 (276)
T ss_pred CceeeeeeccccchhhhcCCCCcccchhhhhhhcccCCcHHHHHhhCCeEEEEEeeccCCCCCcEEEECccc--ccccHH
Confidence 46899999999999875432211 01111 1344668899999999996543 35567888743 238999
Q ss_pred HHHHHHhhcccccCCCceEEEeccCCC------HHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhh
Q psy8789 338 DVVKTIRDHAFETSKYPVILSIEDNCS------LPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLR 402 (851)
Q Consensus 338 ~v~~~i~~~af~~s~yP~ils~e~hc~------~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~ 402 (851)
+|++.|+++.=.. .=-|||.+ +|.. ++.-..+..++.+.|||.|+..+. ....-|+.++|.
T Consensus 84 ~vL~~v~~Fl~~~-~EvVil~~-~~f~~~~~~~~~~h~~l~~~l~~~~g~~l~~~~~--~~~~~~TL~~l~ 150 (276)
T cd08622 84 TVLNDVRNFVQNT-GEIVVLDF-HRFPVGFHSHPEVHDELISLLRQELGDLILRRSR--NYGWGPTLSEIW 150 (276)
T ss_pred HHHHHHHHHHHHC-CCEEEEEE-EccCcCCCCCHHHHHHHHHHHHHHhccceecCcc--cccccCcHHHHH
Confidence 9999999976444 55688887 4553 567778899999999999996432 233458888874
No 147
>PF14633 SH2_2: SH2 domain; PDB: 3GXX_A 3GXW_B 3PJP_B 2XP1_A.
Probab=96.82 E-value=0.0067 Score=62.46 Aligned_cols=76 Identities=22% Similarity=0.435 Sum_probs=59.9
Q ss_pred CccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEe-CCeeeEEEEEEc--------CcEEEeCCcccCCHHH
Q psy8789 661 EWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRA-EDKIKHCRIRVE--------GRLYTIGTTQFESLVE 731 (851)
Q Consensus 661 ~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~-~~~v~H~~I~~~--------~~~~~~~~~~F~sl~e 731 (851)
|-|+ +++-.+|++.|.... .|.++||+|..+..-.+++++. ++...|+.|.-. |....+++..|++|.|
T Consensus 39 P~F~-n~~~~qAe~~L~~~~-~Ge~iIRPSSkG~dhL~vTwKv~d~vyqHidV~E~~K~n~~slG~~L~i~~~~yeDLDE 116 (220)
T PF14633_consen 39 PLFK-NFNYKQAEEYLADQD-VGEVIIRPSSKGPDHLTVTWKVADGVYQHIDVKEEDKENEFSLGKTLKIGGEEYEDLDE 116 (220)
T ss_dssp TTEE-SS-HHHHHHHHCCS--TT-EEEEE-TTTTTEEEEEEEEETTEEEEEEEEEECSSSTTS-SSEEEETTEEESSHHH
T ss_pred CCcc-CCCHHHHHHHHhcCC-CCCEEEeeCCCCCCeEEEEEEEcCCcEEEEEEEECCCcCccccCcEEEECCeEECCHHH
Confidence 4454 999999999999987 8999999999877778999986 556678888861 4567888889999999
Q ss_pred HHHHhhh
Q psy8789 732 LISYYER 738 (851)
Q Consensus 732 LV~~y~~ 738 (851)
||.-|-.
T Consensus 117 ii~r~V~ 123 (220)
T PF14633_consen 117 IIARHVE 123 (220)
T ss_dssp HHHHCHH
T ss_pred HHHHHHH
Confidence 9999854
No 148
>KOG2643|consensus
Probab=96.82 E-value=0.0023 Score=70.15 Aligned_cols=112 Identities=14% Similarity=0.206 Sum_probs=71.3
Q ss_pred CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcccccc---------c-----------c
Q psy8789 126 ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQMF---------T-----------D 185 (851)
Q Consensus 126 G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~---------~-----------~ 185 (851)
|-|+++|-.-|+.-|.++ ++.+.=.|+.+|.|++|.|+-+||...+..++.....- . .
T Consensus 214 GLIsfSdYiFLlTlLS~p--~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~ 291 (489)
T KOG2643|consen 214 GLISFSDYIFLLTLLSIP--ERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALL 291 (489)
T ss_pred CeeeHHHHHHHHHHHccC--cccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHH
Confidence 899999988888777543 44455557888999999999999987765443210000 0 1
Q ss_pred ccccccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHh
Q psy8789 186 SYSHYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLF 250 (851)
Q Consensus 186 ~f~~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~ 250 (851)
.+++..++++.|+.++|.+|+.+.|.|. .+--+..+++... |.|+-..|...|+
T Consensus 292 ~yFFG~rg~~kLs~deF~~F~e~Lq~Ei------l~lEF~~~~~~~~-----g~Ise~DFA~~lL 345 (489)
T KOG2643|consen 292 TYFFGKRGNGKLSIDEFLKFQENLQEEI------LELEFERFDKGDS-----GAISEVDFAELLL 345 (489)
T ss_pred HHhhccCCCccccHHHHHHHHHHHHHHH------HHHHHHHhCcccc-----cccCHHHHHHHHH
Confidence 1123345667799999999999888442 1111444443322 5677777776665
No 149
>KOG4251|consensus
Probab=96.80 E-value=0.0014 Score=66.23 Aligned_cols=135 Identities=19% Similarity=0.282 Sum_probs=85.0
Q ss_pred HHHHHHHHHhHhcCCC-CeeeHHHHHHHHHh-c--CCCCCHHHHHHHHhhhcCCCCCCcCHHHHHH-HHHhhhcc-----
Q psy8789 110 VERWLRKHFYSLEGPR-ETVNLKDIKTFLPR-V--NCKMSTNKLREHFQEVDTRKTNELAFDEFSI-LYNRIMFD----- 179 (851)
Q Consensus 110 ~~~wlr~~F~~~D~d~-G~Is~~El~~ll~~-l--~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~-~~~~l~~r----- 179 (851)
..+=+..+|.+.|.|. ++|+.+|+++-+.. . ++.-+.++-+..|..+|.|++|.+.++||.- |.+.--..
T Consensus 99 srrklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekeva 178 (362)
T KOG4251|consen 99 SRRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVA 178 (362)
T ss_pred HHHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHHH
Confidence 3445677999999998 99999999877653 2 1222223344578889999999999999975 43321110
Q ss_pred ------cc-cc-c--ccc---------ccccC-CCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCc
Q psy8789 180 ------EQ-MF-T--DSY---------SHYSS-DGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPY 239 (851)
Q Consensus 180 ------~~-~~-~--~~f---------~~~~~-~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ 239 (851)
.+ .. + ..+ ..++. .+-.+|.+||..||.-+-.-..+ -.-+.+|+..|++|++ .+
T Consensus 179 dairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmL-rfmVkeivrdlDqdgD-----kq 252 (362)
T KOG4251|consen 179 DAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGML-RFMVKEIVRDLDQDGD-----KQ 252 (362)
T ss_pred HHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhH-HHHHHHHHHHhccCCC-----ee
Confidence 00 00 0 001 12222 12347889999999755322111 1467888899998877 56
Q ss_pred ccHHHHHHHHh
Q psy8789 240 FTFMEFIDFLF 250 (851)
Q Consensus 240 ls~deF~~fL~ 250 (851)
+|..+|++..-
T Consensus 253 lSvpeFislpv 263 (362)
T KOG4251|consen 253 LSVPEFISLPV 263 (362)
T ss_pred ecchhhhcCCC
Confidence 78888876543
No 150
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=96.77 E-value=0.0019 Score=56.94 Aligned_cols=54 Identities=17% Similarity=0.343 Sum_probs=43.2
Q ss_pred CCCCccCHHHHHHHHHHhcCcCcCCH-HHHHHHHHHhccccccccCCCcccHHHHHHHHhC
Q psy8789 192 SDGQTVTASELTNFLIREQNETNVNE-REVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFS 251 (851)
Q Consensus 192 ~~~~~lt~~ef~~FL~~~Q~e~~~s~-~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S 251 (851)
++.++|+..||+..|+.+=+ ..+++ ++++++|+.+|.|++ |.|+|+||+.+|.+
T Consensus 21 ~~~g~i~~~ELk~ll~~elg-~~ls~~~~v~~mi~~~D~d~D-----G~I~F~EF~~l~~~ 75 (89)
T cd05022 21 GGKESLTASEFQELLTQQLP-HLLKDVEGLEEKMKNLDVNQD-----SKLSFEEFWELIGE 75 (89)
T ss_pred CCCCeECHHHHHHHHHHHhh-hhccCHHHHHHHHHHhCCCCC-----CCCcHHHHHHHHHH
Confidence 46677888888888886322 33566 789999999998877 89999999999875
No 151
>cd08587 PI-PLCXDc_like Catalytic domain of phosphatidylinositol-specific phospholipase C X domain containing and similar proteins. This family corresponds to the catalytic domain present in phosphatidylinositol-specific phospholipase C X domain containing proteins (PI-PLCXD) which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs mainly found in eukaryota. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) have a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs and their bacterial homologs contain a single TIM-barrel type catalytic domain, X domain, which is more closely related to that of bacterial PI-PLCs. Although the biological function of eukaryotic PI-PLCXDs still remains unclear, it may be
Probab=96.67 E-value=0.0086 Score=65.16 Aligned_cols=130 Identities=21% Similarity=0.217 Sum_probs=90.1
Q ss_pred CCccccccccccCCccccCCccccCC-------------CHH--------HHHHHHhcCccEEEEeeecCC--CCCceEe
Q psy8789 269 TKPLSHYFINSSHNTYLTGDQFSSES-------------SCE--------AYVRCLRQGCRCIELDCWDGP--DGTPIVY 325 (851)
Q Consensus 269 ~~pl~~Y~i~sshntyl~~~q~~~~s-------------s~~--------~y~~~l~~gcRcveld~wdg~--~~~p~v~ 325 (851)
+.||++..|--|||+.--+-.-.+.. -+. ....=|..|+|.+.|++.-.+ ++.-.++
T Consensus 6 ~~~l~~l~iPGtHds~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tQ~~~i~~QL~~GiR~fDlR~~~~~~~~~~~~~~ 85 (288)
T cd08587 6 DLPLRDLVIPGSHDSGMYTINGDSPVGPDQPEFGKIAKGIVRKWSVTQSLSIYDQLEAGIRYFDLRVAYKPDSENKLYFV 85 (288)
T ss_pred hCchhheecccccccceeEcCCCCCCCCcchhhhhhHHHHHHHHhhccCcCHHHHHhhCceEEEEEEeecCCCCCeEEEE
Confidence 57999999999999864332111110 011 234557889999999996544 4566788
Q ss_pred ecCCceeeeehHHHHHHHhhcccccCCCceEEEeccC-----CCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhh
Q psy8789 326 HGHTLTTKIKFKDVVKTIRDHAFETSKYPVILSIEDN-----CSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQ 400 (851)
Q Consensus 326 hg~t~t~~i~~~~v~~~i~~~af~~s~yP~ils~e~h-----c~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~ 400 (851)
||.- +-.+|.+|++.|+++.=....=-|||.++.. ++.++-..+...|.++||+.++.. .....-|+.++
T Consensus 86 H~~~--~~~~~~~~l~~i~~fl~~~p~Evvil~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~---~~~~~~~tL~~ 160 (288)
T cd08587 86 HGLY--SGEPVDEVLEDVNDFLDEHPKEVVILDFNHFYGMDDKSPEDHEKLVELLEDIFGDKLCPR---DSDLLDVTLAD 160 (288)
T ss_pred eecc--cccCHHHHHHHHHHHHHhCCCcEEEEEEEccccCCcccHHHHHHHHHHHHHHhccccCCC---ccccCCCcHHH
Confidence 8832 2388999999999875444344588888632 235777888899999999999863 22345578899
Q ss_pred hhc
Q psy8789 401 LRG 403 (851)
Q Consensus 401 l~~ 403 (851)
|..
T Consensus 161 l~~ 163 (288)
T cd08587 161 LWE 163 (288)
T ss_pred HHh
Confidence 983
No 152
>PLN02964 phosphatidylserine decarboxylase
Probab=96.65 E-value=0.0047 Score=73.16 Aligned_cols=65 Identities=14% Similarity=0.244 Sum_probs=59.6
Q ss_pred HHHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhh
Q psy8789 112 RWLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRI 176 (851)
Q Consensus 112 ~wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l 176 (851)
.+++++|..+|.|+ |.|+++|+..++..++...+++++.++|+.+|.|++|.|+++||..++...
T Consensus 179 ~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~ 244 (644)
T PLN02964 179 SFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQ 244 (644)
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence 35788999999999 999999999999999877888999999999999999999999999988664
No 153
>KOG0034|consensus
Probab=96.64 E-value=0.0086 Score=60.31 Aligned_cols=96 Identities=11% Similarity=0.163 Sum_probs=74.6
Q ss_pred HHHHHHhHhcCCC-Ce-eeHHHHHHHHHhcCCCCCHH-HHHHHHhhhcCCCCCCcCHHHHHHHHHhhhccccc--cc---
Q psy8789 113 WLRKHFYSLEGPR-ET-VNLKDIKTFLPRVNCKMSTN-KLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQM--FT--- 184 (851)
Q Consensus 113 wlr~~F~~~D~d~-G~-Is~~El~~ll~~l~~~~s~~-~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~--~~--- 184 (851)
|..+++..+|.++ |. |++++..+++.-...+.+.. +++=.|+-+|.+++|.|+.+|+..++..+...... .+
T Consensus 67 ~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~ 146 (187)
T KOG0034|consen 67 LADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLE 146 (187)
T ss_pred HHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHH
Confidence 5566778888877 66 99999999999887777666 77778999999999999999999998876643111 11
Q ss_pred ----cccc-cccCCCCccCHHHHHHHHHH
Q psy8789 185 ----DSYS-HYSSDGQTVTASELTNFLIR 208 (851)
Q Consensus 185 ----~~f~-~~~~~~~~lt~~ef~~FL~~ 208 (851)
..+. .+.+++|.|+.+||.+++..
T Consensus 147 ~i~d~t~~e~D~d~DG~IsfeEf~~~v~~ 175 (187)
T KOG0034|consen 147 DIVDKTFEEADTDGDGKISFEEFCKVVEK 175 (187)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence 1122 66777889999999999863
No 154
>cd08556 GDPD Glycerophosphodiester phosphodiesterase domain as found in prokaryota and eukaryota, and similar proteins. The typical glycerophosphodiester phosphodiesterase domain (GDPD) consists of a TIM barrel and a small insertion domain named the GDPD-insertion (GDPD-I) domain, which is specific for GDPD proteins. This family corresponds to both typical GDPD domain and GDPD-like domain which lacks the GDPD-I region. Members in this family mainly consist of a large family of prokaryotic and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), and a number of uncharacterized homologs. Sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.41) from spider venom, SMases D-like proteins, and phospholipase D (PLD) from several pathogenic bacteria are also included in this family. GDPD plays an essential role in glycerol metabolism and catalyzes the hydrolysis of glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcoho
Probab=96.62 E-value=0.0064 Score=61.32 Aligned_cols=62 Identities=26% Similarity=0.345 Sum_probs=52.5
Q ss_pred cccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHhhcccccCCCceEEEeccCCC
Q psy8789 290 FSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIRDHAFETSKYPVILSIEDNCS 364 (851)
Q Consensus 290 ~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~~~af~~s~yP~ils~e~hc~ 364 (851)
...+-|.++|..|+..||++||+|+.=-.||+|||.|- -.+|+||++..++ -+.+.+|.=..
T Consensus 10 ~~pent~~a~~~a~~~g~~~iE~Dv~~tkDg~~vv~Hd-----i~tL~e~l~~~~~--------~~~i~leiK~~ 71 (189)
T cd08556 10 EAPENTLAAFRKALEAGADGVELDVQLTKDGVLVVIHD-----IPTLEEVLELVKG--------GVGLNIELKEP 71 (189)
T ss_pred CCCchHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEEcC-----CCCHHHHHHhccc--------CcEEEEEECCC
Confidence 45688999999999999999999999999999999998 7799999998876 24455565554
No 155
>KOG4575|consensus
Probab=96.62 E-value=0.0022 Score=72.69 Aligned_cols=59 Identities=24% Similarity=0.451 Sum_probs=47.4
Q ss_pred ceEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEE-EE-CCceEEEecCCCccccCCC
Q psy8789 784 SITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRG-DY-GGKRMHWFPSNYVAEIEPQ 843 (851)
Q Consensus 784 ~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g-~~-~g~~~G~fP~nyv~~i~~~ 843 (851)
+..++|+|.+.++..++|.|..||+|+++...+ |||.+ .. +..+.|+||+|||.-++..
T Consensus 8 p~~vrA~y~w~ge~eGdl~f~egDlie~trI~d-gkwwi~lhrNk~~~g~fpsNFvhcLd~r 68 (874)
T KOG4575|consen 8 PCMVRALYAWPGEREGDLKFTEGDLIEQTRIED-GKWWILLHRNKDEDGLFPSNFVHCLDKR 68 (874)
T ss_pred CceEEeeccCCCCcccccceecccceeEEeecc-ceeeeeeeecccccccCcccceeecccc
Confidence 367999999999999999999999999998776 55555 43 3566699999999655443
No 156
>KOG3632|consensus
Probab=96.60 E-value=0.0018 Score=76.77 Aligned_cols=59 Identities=31% Similarity=0.572 Sum_probs=50.2
Q ss_pred eEEEEEEeecCC--------CCCCcccCCCCEEEEe-EecCCCeEEEEECCceEEEecCCCccccCCCC
Q psy8789 785 ITVKALYDYQAR--------NDDELSFPKHAIISNV-TRAEGGWWRGDYGGKRMHWFPSNYVAEIEPQH 844 (851)
Q Consensus 785 ~~~~al~dy~~~--------~~~eLs~~~Gd~i~vl-~~~~~gWw~g~~~g~~~G~fP~nyv~~i~~~~ 844 (851)
..++|||||.+. ...||+|++|+||.|+ +++.+|++.|+++|.. |++|.|+|.++....
T Consensus 1139 rifVAlfDYDpl~MSpNpDAaEeELpFregqIikV~GDkDadgFY~GE~ngr~-GlIPcNmvae~~vd~ 1206 (1335)
T KOG3632|consen 1139 RIFVALFDYDPLQMSPNPDAAEEELPFREGQIIKVLGDKDADGFYMGELNGRR-GLIPCNMVAEQPVDN 1206 (1335)
T ss_pred eeeEeeeccCccccCCCCChhhhccccccCcEEEEeccccccceeeccccccc-ccccccccccccCCc
Confidence 568999999873 3448999999999998 5677899999999998 999999999865543
No 157
>KOG0609|consensus
Probab=96.55 E-value=0.0034 Score=70.87 Aligned_cols=56 Identities=30% Similarity=0.637 Sum_probs=47.2
Q ss_pred ceEEEEEEeecCCCCC-------CcccCCCCEEEEeEecCCCeEEEEECC----ceEEEecCCCccc
Q psy8789 784 SITVKALYDYQARNDD-------ELSFPKHAIISNVTRAEGGWWRGDYGG----KRMHWFPSNYVAE 839 (851)
Q Consensus 784 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~vl~~~~~gWw~g~~~g----~~~G~fP~nyv~~ 839 (851)
...++|+|||.+..++ .|+|++|||+.|+.++|..||.++..| +..|++|+...++
T Consensus 214 ~~~vra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~qdD~nWWQA~~~~~~~~~~AGLiPS~~~qe 280 (542)
T KOG0609|consen 214 VVFVRALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQDDPNWWQARRVGDPFGGLAGLIPSKELQE 280 (542)
T ss_pred eeeehhhcCcCcccCCcccchhcCCcccccceeeeccCCCcchhhhhcccCccccccccccCHHHHH
Confidence 4789999999997655 599999999999999999999997543 4459999977664
No 158
>cd08562 GDPD_EcUgpQ_like Glycerophosphodiester phosphodiesterase domain in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase UgpQ and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli cytosolic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), UgpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two distinct GP-GDEs. UgpQ gene from the E. coli ugp operon codes for a cytosolic phosphodiesterase GlpQ, which is the prototype of this family. Various glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG)
Probab=96.55 E-value=0.0052 Score=64.34 Aligned_cols=40 Identities=30% Similarity=0.440 Sum_probs=37.2
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCc
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTL 330 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~ 330 (851)
.-+-|.++|..|+..|+.+||+|++=-.||++||.|-.|+
T Consensus 11 ~pENT~~af~~A~~~gad~iE~Dv~~TkDg~lvv~HD~~l 50 (229)
T cd08562 11 APENTLAAFRAAAELGVRWVEFDVKLSGDGTLVLIHDDTL 50 (229)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEeECCCCCEEEEcCCCC
Confidence 3577999999999999999999999999999999998876
No 159
>cd08582 GDPD_like_2 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=96.52 E-value=0.0071 Score=63.60 Aligned_cols=40 Identities=30% Similarity=0.361 Sum_probs=37.3
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCc
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTL 330 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~ 330 (851)
.-+-|.++|..|+..||++||+|++=-.||.|||.|..|+
T Consensus 11 ~pENTl~af~~A~~~G~~~vE~Dv~lTkDg~~Vv~HD~~l 50 (233)
T cd08582 11 APENTLAAFELAWEQGADGIETDVRLTKDGELVCVHDPTL 50 (233)
T ss_pred CCchHHHHHHHHHHcCCCEEEEEEEEccCCCEEEecCCcc
Confidence 4578999999999999999999999999999999999887
No 160
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=96.51 E-value=0.0052 Score=54.18 Aligned_cols=53 Identities=21% Similarity=0.431 Sum_probs=43.2
Q ss_pred CCccCHHHHHHHHHHh-cCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhC
Q psy8789 194 GQTVTASELTNFLIRE-QNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFS 251 (851)
Q Consensus 194 ~~~lt~~ef~~FL~~~-Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S 251 (851)
+++|+.+||+++|+++ ......+++++.++++.++.+++ |.|+|++|+.+|..
T Consensus 26 ~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~d-----G~Idf~EFv~lm~~ 79 (88)
T cd05029 26 KNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKD-----QEVNFQEYVTFLGA 79 (88)
T ss_pred CCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCC-----CCCcHHHHHHHHHH
Confidence 5689999999999752 12344688899999999988776 89999999999863
No 161
>PF03009 GDPD: Glycerophosphoryl diester phosphodiesterase family; InterPro: IPR004129 Glycerophosphoryl diester phosphodiesterases display broad specificity for glycerophosphodiesters; glycerophosphocholine, glycerophosphoethanolamine, glycerophosphoglycerol, and bis(glycerophosphoglycerol) all of which are are hydrolysed by this enzyme.; GO: 0008889 glycerophosphodiester phosphodiesterase activity, 0006071 glycerol metabolic process; PDB: 3I10_A 2P76_H 2OOG_F 3KS6_D 3KS5_A 2PZ0_B 1YDY_B 1T8Q_A 1O1Z_A 3L12_B ....
Probab=96.34 E-value=0.0042 Score=65.58 Aligned_cols=40 Identities=35% Similarity=0.577 Sum_probs=33.9
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCc
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTL 330 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~ 330 (851)
..+.|.++|..|+..|+++||+|+|=-.||+|||+|..++
T Consensus 8 ~pENTl~af~~A~~~G~~~iE~Dv~lTkDg~~Vv~HD~~l 47 (256)
T PF03009_consen 8 APENTLAAFRAAIELGADGIELDVQLTKDGVPVVFHDDTL 47 (256)
T ss_dssp SSTTSHHHHHHHHHTTSSEEEEEEEE-TTS-EEE-SSSBS
T ss_pred ChhhHHHHHHHHHHhCCCeEcccccccCCceeEeccCCee
Confidence 3489999999999999999999999999999999998654
No 162
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=96.34 E-value=0.014 Score=53.10 Aligned_cols=63 Identities=19% Similarity=0.336 Sum_probs=52.7
Q ss_pred HHHHHHHhHhcCCCCeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhh
Q psy8789 112 RWLRKHFYSLEGPRETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRI 176 (851)
Q Consensus 112 ~wlr~~F~~~D~d~G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l 176 (851)
..+...|...|..+|.|+-.+++.++.+- +.+.+.|.+++.-+|.+++|.|+++||.-.|+.+
T Consensus 10 ~~y~~~F~~l~~~~g~isg~~a~~~f~~S--~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li 72 (104)
T PF12763_consen 10 QKYDQIFQSLDPQDGKISGDQAREFFMKS--GLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLI 72 (104)
T ss_dssp HHHHHHHHCTSSSTTEEEHHHHHHHHHHT--TSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCeEeHHHHHHHHHHc--CCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHH
Confidence 35678999888655999999999998865 5667889999999999999999999999877653
No 163
>cd08579 GDPD_memb_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial glycerophosphodiester phosphodiesterases. In addition to a C-terminal GDPD domain, most members in this family have an N-terminus that functions as a membrane anchor.
Probab=96.33 E-value=0.0076 Score=62.78 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=37.4
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCc
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTL 330 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~ 330 (851)
.-+.|..+|..|+..||.+||+|++=-.||+|||.|-.|+
T Consensus 11 ~pENT~~af~~A~~~Gad~vE~DV~~T~Dg~~vv~HD~~l 50 (220)
T cd08579 11 GVENTLEALEAAIKAKPDYVEIDVQETKDGQFVVMHDANL 50 (220)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEEcCCch
Confidence 4578999999999999999999999999999999999886
No 164
>KOG3508|consensus
Probab=96.28 E-value=0.00024 Score=84.86 Aligned_cols=235 Identities=20% Similarity=0.177 Sum_probs=145.8
Q ss_pred CCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeC-CeeeEEEEeeecCCCcEEeccCceecChHH
Q psy8789 501 EKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQ-GRVNHCRIRSKPESGQFYLVEKSYFDSLYS 579 (851)
Q Consensus 501 ~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~-~~v~H~~I~~~~~~g~~~~~~~~~F~sl~e 579 (851)
-.||||++. |.-|+.+++. ....|.++||++..-++.+.+++--. +.+.|+++.........+-+++..|..++-
T Consensus 81 ~~~~~~~lr--r~i~e~r~r~--~e~s~~~wi~e~~~lp~~~~l~~~~~~d~~l~~r~~s~~~~s~vl~gE~~~f~~lPp 156 (932)
T KOG3508|consen 81 RKWYMENLR--RTIAESRLRR--AENSGSYWIREAKRLPGKGKLSCLLQLDGTLYARTISKCGTSNVLWGENFLFPVLPP 156 (932)
T ss_pred hhhhhcchh--hhcccchhhc--cCCceeEEeeccCcCCCcceeehhhccchhHHhhhhhhcccchhccccccccccCCc
Confidence 479999999 9999999877 56889999999999999999887642 238888886433322233333333433322
Q ss_pred HHHHHhhcCCCC-CcceeEecCCCCCCCCccccccccccccchhhhhhhhcccCCCceeeecCCCCCCCCCC-------C
Q psy8789 580 LISHYRTNHLRS-QEFLITLQEPVPQPNQHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYEP-------V 651 (851)
Q Consensus 580 LI~~y~~~~l~~-~gl~~~L~~p~~~~~~~~~~~~~~~~l~~~~ae~~l~~v~~dG~flvr~~~~~~~~~~p-------~ 651 (851)
++. ++...+=..|..+. ++.+. . ..-. -.+......+.+||.++.....+..+.+- .
T Consensus 157 ---------l~~~~~~~~~~i~~~~k~-~~n~~-l---~~~~-~~~f~~~~~~~d~w~~v~t~~~~e~~~i~~s~~~~~~ 221 (932)
T KOG3508|consen 157 ---------LPVVDVLRVRAILPKKKK-PTNDE-I---GFVK-GDEFPVHRDLEDGWYWVTTSRTDEGGSIIASLVGGKS 221 (932)
T ss_pred ---------cchhhhhhhhhhhhhhcc-Ccccc-c---cccc-chhheecccccceeEEeeccccccCCccccccccccc
Confidence 110 11111111111111 11000 0 0001 12223345667888887765544433311 1
Q ss_pred CCCCCCCCCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCCeeeEEEEEE-cCcEEEeCCcccCCHH
Q psy8789 652 PQPNQHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAEDKIKHCRIRV-EGRLYTIGTTQFESLV 730 (851)
Q Consensus 652 ~~~~~~~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~~v~H~~I~~-~~~~~~~~~~~F~sl~ 730 (851)
.-+.+.....|+|++|...+|.+.|.....-+-|++|.+...++.|.+--.-.....|++|.. ....|+.+...++.+.
T Consensus 222 ~~~~~~~~ar~q~i~i~~~e~y~~~~e~~~~~y~~lc~~lnp~l~~~~kEe~a~aLvr~l~s~~~ak~fl~Dl~~~e~~r 301 (932)
T KOG3508|consen 222 ESPDPRIKARWQSINILPMEAYDELAETGTYNYFLLCPVLNPPLDVSLKEELANALVRVLISTGRAKQFLMDLRMKEVLR 301 (932)
T ss_pred CCCCccccccccccccCchHHHHHHHHHhccceeeeecccCCCcchhHHHHHHHHHHHHHHhcchHHHHhhcchhHhhhh
Confidence 223445566899999999999999988775668999998776776655333345677777766 3556777777777766
Q ss_pred H-HHHHhhhCCCccceeecCCCcHh
Q psy8789 731 E-LISYYERHPLYKKIELWYPVSED 754 (851)
Q Consensus 731 e-LV~~y~~~~l~~~~~L~~Pv~~~ 754 (851)
. -++||......+.+.+..|+..-
T Consensus 302 ~~~idhlifrentlatka~ep~mkl 326 (932)
T KOG3508|consen 302 LGDIDHLIFRENTLATKAIEPYMKL 326 (932)
T ss_pred ccchhhhhhhhhhhhhhhhhHHHHh
Confidence 6 78898888877777777777643
No 165
>KOG0036|consensus
Probab=96.28 E-value=0.0068 Score=66.23 Aligned_cols=92 Identities=14% Similarity=0.199 Sum_probs=54.1
Q ss_pred HHHHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhccc-cccccccc
Q psy8789 111 ERWLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDE-QMFTDSYS 188 (851)
Q Consensus 111 ~~wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~-~~~~~~f~ 188 (851)
..|.+..|..+|.|+ |.+++.|.++-+.. .+.++..+|+..|.+.+|.++-+|....++.+--.- +.....|+
T Consensus 50 ~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~-----~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~ 124 (463)
T KOG0036|consen 50 YEAAKMLFSAMDANRDGRVDYSEFKRYLDN-----KELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFF 124 (463)
T ss_pred hHHHHHHHHhcccCcCCcccHHHHHHHHHH-----hHHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHH
Confidence 346666777777776 77777777666542 245566677777777777777776666665543210 00011222
Q ss_pred --cccCCCCccCHHHHHHHHH
Q psy8789 189 --HYSSDGQTVTASELTNFLI 207 (851)
Q Consensus 189 --~~~~~~~~lt~~ef~~FL~ 207 (851)
.+.++...|+.+|+++|+.
T Consensus 125 e~~d~~g~~~I~~~e~rd~~l 145 (463)
T KOG0036|consen 125 EHMDKDGKATIDLEEWRDHLL 145 (463)
T ss_pred HHhccCCCeeeccHHHHhhhh
Confidence 4555556677777777765
No 166
>KOG2528|consensus
Probab=96.26 E-value=0.0013 Score=72.18 Aligned_cols=57 Identities=26% Similarity=0.496 Sum_probs=50.2
Q ss_pred EEEEEEeecCCCCCCcccCCCCEEEEeEec-CCCeEEEEECCceEEEecCCCccccCC
Q psy8789 786 TVKALYDYQARNDDELSFPKHAIISNVTRA-EGGWWRGDYGGKRMHWFPSNYVAEIEP 842 (851)
Q Consensus 786 ~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~-~~gWw~g~~~g~~~G~fP~nyv~~i~~ 842 (851)
..|++|||..++..|++...||++.+.... .+|||+|....+.+|+||+.||+.+..
T Consensus 4 k~RamyDf~~E~~sElsi~~~evl~i~~e~~~~GwLeg~Nsrge~GlfPa~yVeV~~~ 61 (490)
T KOG2528|consen 4 KARAMYDFQSEGHSELSIWEGEVLSITSEDVIEGWLEGSNSRGERGLFPASYVEVTRL 61 (490)
T ss_pred chhhhcchhhcccccccccccceeeecCcccccccccCCCccCccCCCcccceeeecc
Confidence 578999999999999999999999998655 679999997666669999999998763
No 167
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=96.11 E-value=0.0085 Score=40.99 Aligned_cols=27 Identities=11% Similarity=0.461 Sum_probs=24.2
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHHHhc
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFLPRV 140 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll~~l 140 (851)
++++|..+|+|+ |.|+++|+..+|++|
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 467899999999 999999999999875
No 168
>KOG0031|consensus
Probab=96.10 E-value=0.017 Score=54.94 Aligned_cols=64 Identities=11% Similarity=0.335 Sum_probs=58.2
Q ss_pred HHHHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHH
Q psy8789 111 ERWLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYN 174 (851)
Q Consensus 111 ~~wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~ 174 (851)
+.-+..+|..+|.++ |+|+.+.++.+|...+-+.+.+++.++|..+-.|..|.++|.+|..++.
T Consensus 100 e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 100 EEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred HHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 345778999999998 9999999999999999999999999999999888999999999988765
No 169
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.04 E-value=0.0058 Score=40.25 Aligned_cols=23 Identities=35% Similarity=0.717 Sum_probs=15.9
Q ss_pred HHHHhhhcCCCCCCcCHHHHHHH
Q psy8789 150 REHFQEVDTRKTNELAFDEFSIL 172 (851)
Q Consensus 150 ~~~f~e~D~~~~g~L~f~EF~~~ 172 (851)
++.|+.+|.|++|.|+++||..+
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHH
Confidence 45677777777777777777665
No 170
>cd08565 GDPD_pAtGDE_like Glycerophosphodiester phosphodiesterase domain of putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (pAtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.96 E-value=0.027 Score=59.38 Aligned_cols=40 Identities=30% Similarity=0.468 Sum_probs=36.9
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCc
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTL 330 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~ 330 (851)
.-+-|..++.+|+..||..||+|++=-.||+|||+|-.|+
T Consensus 11 ~pENTl~af~~A~~~G~d~iE~DV~~TkDg~~Vv~HD~~l 50 (235)
T cd08565 11 WPENTLEGFRKALELGVDAVEFDVHLTADGEVVVIHDPTL 50 (235)
T ss_pred CCccHHHHHHHHHHcCCCEEEEeEEEccCCCEEEECCChh
Confidence 3477999999999999999999999999999999998876
No 171
>KOG0030|consensus
Probab=95.92 E-value=0.045 Score=51.29 Aligned_cols=81 Identities=7% Similarity=0.157 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHHhhhhccCCChhhHHHHHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCc
Q psy8789 86 ECGLWVTGLRYLVPDTLRAPYPLNVERWLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNEL 164 (851)
Q Consensus 86 e~~~Wv~gL~~L~~~~~~~~~~~~~~~wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L 164 (851)
+|..|..=++.+.++.- +-..+.+++ -..-+|+++ |.|+..|++.+|..||-+++++++..++.- -.|.+|.|
T Consensus 67 ~FE~fLpm~q~vaknk~----q~t~edfve-gLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag-~eD~nG~i 140 (152)
T KOG0030|consen 67 DFEEFLPMYQQVAKNKD----QGTYEDFVE-GLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAG-QEDSNGCI 140 (152)
T ss_pred hHHHHHHHHHHHHhccc----cCcHHHHHH-HHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHcc-ccccCCcC
Confidence 46788888888887632 222455654 456789999 999999999999999999999999988765 34578999
Q ss_pred CHHHHHHH
Q psy8789 165 AFDEFSIL 172 (851)
Q Consensus 165 ~f~EF~~~ 172 (851)
+|+.|+.-
T Consensus 141 ~YE~fVk~ 148 (152)
T KOG0030|consen 141 NYEAFVKH 148 (152)
T ss_pred cHHHHHHH
Confidence 99999864
No 172
>KOG4566|consensus
Probab=95.92 E-value=0.014 Score=61.20 Aligned_cols=160 Identities=19% Similarity=0.107 Sum_probs=103.1
Q ss_pred CCCCCCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeCCeeeEEEEeeecCCCcEEecc-----C
Q psy8789 497 LHFGEKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQGRVNHCRIRSKPESGQFYLVE-----K 571 (851)
Q Consensus 497 ~~~~~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~v~H~~I~~~~~~g~~~~~~-----~ 571 (851)
.+..-.||+|.++ +.+|+..|... +.|+|+||+|...+-.+.|++......+.-+|.. .++.|...- .
T Consensus 48 ~~~~~g~~w~~~~--~~~~~~~l~~~---p~~~~l~Rdss~~~~~~~I~vk~~~g~~~~r~~~--~~~sfr~ds~~~~~~ 120 (258)
T KOG4566|consen 48 LLDSSGHYWGLET--ANEAELCLGQE---PRGTFLVRDSSHRPYLFTISVKTHSGPKNLRIQY--QDSSFRLDSSHRHTP 120 (258)
T ss_pred ccccCCccccccc--chhHHHhhcCC---CccceeeecCcCccccceeEeeeccCCCCccccc--cccceecccccccCC
Confidence 4556789999999 89998888874 9999999999877777899999877777777752 335555422 2
Q ss_pred --ceecChHHHHHHHhhcCCCCCcceeEecCCCCCCCCccccccccccccchhhhhhhhcccCCCceeeecCCCCCCCCC
Q psy8789 572 --SYFDSLYSLISHYRTNHLRSQEFLITLQEPVPQPNQHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYE 649 (851)
Q Consensus 572 --~~F~sl~eLI~~y~~~~l~~~gl~~~L~~p~~~~~~~~~~~~~~~~l~~~~ae~~l~~v~~dG~flvr~~~~~~~~~~ 649 (851)
..|+.+..++++|+..... ...|-+ +.. .+
T Consensus 121 pl~~~e~~~~~~~~y~~~~~~-------~~~~~~---~~~-------------------------~~------------- 152 (258)
T KOG4566|consen 121 PLISFEDVEVLIHHYRQSRKA-------DGVPKD---PNM-------------------------GA------------- 152 (258)
T ss_pred CcccChhHHHHHHhhhhhhhc-------cCccCC---CCc-------------------------hh-------------
Confidence 3889999999999654311 111110 000 00
Q ss_pred CCCCCCCCCCCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCCeeeEEEEE
Q psy8789 650 PVPQPNQHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAEDKIKHCRIR 713 (851)
Q Consensus 650 p~~~~~~~~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~~v~H~~I~ 713 (851)
.........+.|+++..++.++.++....+ -+.+.++.|...--.++|.-..-+.+.+++..
T Consensus 153 -~~~~~e~~~~~~~~~~~~~~~~~~~~l~~p-~~~~~s~~Slq~lcr~tln~~l~~~~~~~~l~ 214 (258)
T KOG4566|consen 153 -RIQCLEGTNPMPAYRVPPRAEGRRLPLTRP-LVSRDSVASLQHLCRFTLNGRLVGTTSVRPLP 214 (258)
T ss_pred -hcccccCCCccceecccCccccccccCCCc-eeccccccchhhhhhccccceeeccccccccC
Confidence 000112334567888888888888877766 77777777766444455553333444444443
No 173
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=95.90 E-value=0.018 Score=50.88 Aligned_cols=51 Identities=16% Similarity=0.307 Sum_probs=38.6
Q ss_pred CccCHHHHHHHHHHhcC---cCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHh
Q psy8789 195 QTVTASELTNFLIREQN---ETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLF 250 (851)
Q Consensus 195 ~~lt~~ef~~FL~~~Q~---e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~ 250 (851)
++|+.+||+.+|..+.. ....++.++.++++.++.|++ |.|+|++|+.+|.
T Consensus 26 ~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~D-----G~I~f~EF~~l~~ 79 (89)
T cd05023 26 YQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSD-----GQLDFQEFLNLIG 79 (89)
T ss_pred CeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCC-----CcCcHHHHHHHHH
Confidence 36888888888876521 112345789999999988776 8999999999876
No 174
>KOG0040|consensus
Probab=95.89 E-value=0.082 Score=65.74 Aligned_cols=162 Identities=14% Similarity=0.227 Sum_probs=107.3
Q ss_pred eCCHHHHHHHHHHHHHHhhhh--c---------cCCChhhHHHHHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCC--H
Q psy8789 81 AFSEKECGLWVTGLRYLVPDT--L---------RAPYPLNVERWLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMS--T 146 (851)
Q Consensus 81 A~s~ee~~~Wv~gL~~L~~~~--~---------~~~~~~~~~~wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s--~ 146 (851)
+.+.-.++.|...++-.+... + +.-+..++.. +.-+|.-||+++ |.|+.++.+.+|+.+|++.+ +
T Consensus 2212 ~st~GlaqqwdQl~qL~~rMqhnlEQqIqarn~~GVtEe~L~E-Fs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvE 2290 (2399)
T KOG0040|consen 2212 HSTVGLAQQWDQLDQLMMRMQHNLEQQIQARNHNGVTEEQLKE-FSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVE 2290 (2399)
T ss_pred cCchHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHH-HHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccc
Confidence 456677899987776554311 1 0112222222 355788899999 99999999999999998873 2
Q ss_pred -----HHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcc----ccccccccccccCCCCccCHHHHHHHHHHhcCcCcCCH
Q psy8789 147 -----NKLREHFQEVDTRKTNELAFDEFSILYNRIMFD----EQMFTDSYSHYSSDGQTVTASELTNFLIREQNETNVNE 217 (851)
Q Consensus 147 -----~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r----~~~~~~~f~~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~ 217 (851)
.++++++.-+|.+.+|.++..+|+.||-.--.. .+..+..|...+.+..|+|.+++..-|..+|.
T Consensus 2291 e~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETeNI~s~~eIE~AfraL~a~~~yvtke~~~~~ltreqa------ 2364 (2399)
T KOG0040|consen 2291 EGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKETENILSSEEIEDAFRALDAGKPYVTKEELYQNLTREQA------ 2364 (2399)
T ss_pred cCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhcccccccchHHHHHHHHHhhcCCccccHHHHHhcCCHHHH------
Confidence 378899999999999999999999987542111 11111234433447889999998877765552
Q ss_pred HHHHHHHHHhc-cccccccCCCcccHHHHHHHHh
Q psy8789 218 REVSRHMRDYL-QDEQRNVQEPYFTFMEFIDFLF 250 (851)
Q Consensus 218 ~~~~~li~~~d-~d~~~~~~~g~ls~deF~~fL~ 250 (851)
+-|..-|..|. +... ......|.+.+|++-|+
T Consensus 2365 efc~s~m~~~~e~~~~-~s~q~~l~y~dfv~sl~ 2397 (2399)
T KOG0040|consen 2365 EFCMSKMKPYAETSSG-RSDQVALDYKDFVNSLF 2397 (2399)
T ss_pred HHHHHHhhhhcccccC-CCccccccHHHHHHHHh
Confidence 34555555553 2211 12246789999988665
No 175
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=95.87 E-value=0.029 Score=44.40 Aligned_cols=27 Identities=26% Similarity=0.391 Sum_probs=16.4
Q ss_pred HHHHHhhhcCCCCCCcCHHHHHHHHHh
Q psy8789 149 LREHFQEVDTRKTNELAFDEFSILYNR 175 (851)
Q Consensus 149 l~~~f~e~D~~~~g~L~f~EF~~~~~~ 175 (851)
+..+|+.+|.+++|.|++++|..+++.
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~ 28 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKS 28 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 345566666666666666666665544
No 176
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=95.85 E-value=0.018 Score=51.26 Aligned_cols=54 Identities=20% Similarity=0.337 Sum_probs=39.9
Q ss_pred CCC-ccCHHHHHHHHHHhcCc---CcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhC
Q psy8789 193 DGQ-TVTASELTNFLIREQNE---TNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFS 251 (851)
Q Consensus 193 ~~~-~lt~~ef~~FL~~~Q~e---~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S 251 (851)
+++ .|+.+||+..|..+..+ ...++.++.+++++++.+++ |.|+|++|+.+|.+
T Consensus 24 gdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~d-----G~Idf~EF~~l~~~ 81 (93)
T cd05026 24 GDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKD-----NEVDFNEFVVLVAA 81 (93)
T ss_pred CCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCC-----CCCCHHHHHHHHHH
Confidence 444 48888888888664221 12255789999999988766 89999999998864
No 177
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=95.85 E-value=0.022 Score=64.07 Aligned_cols=53 Identities=8% Similarity=0.043 Sum_probs=44.8
Q ss_pred HHHHHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHh
Q psy8789 110 VERWLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNR 175 (851)
Q Consensus 110 ~~~wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~ 175 (851)
.+..++.+|..+|.|+ |.|+.+|+.. +..+|+.+|.|++|.|+++||..+++.
T Consensus 332 ~~~~l~~aF~~~D~dgdG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 332 FTHAAQEIFRLYDLDGDGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred hhHHHHHHHHHhCCCCCCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 4557788899999999 9999999842 467899999999999999999998765
No 178
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=95.84 E-value=0.023 Score=52.70 Aligned_cols=92 Identities=15% Similarity=0.272 Sum_probs=58.3
Q ss_pred hhhHHHHHHHHHhHhcCCC----CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhccccc
Q psy8789 107 PLNVERWLRKHFYSLEGPR----ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQM 182 (851)
Q Consensus 107 ~~~~~~wlr~~F~~~D~d~----G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~ 182 (851)
+.++..|+..+....-... ....++... ...-...+.-+|..+|.|++|.|+.+|...++ +......
T Consensus 11 ~~R~~dW~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~~~e~~ 81 (116)
T cd00252 11 PLRLRDWFKNVHEDLKERDELEKHKLRLKKSL-------YPMCKDPVGWMFNQLDGNYDGKLSHHELAPIR--LDPNEHC 81 (116)
T ss_pred HHHHHHHHHHHHHHHhhcccchhhhchhhhhh-------hHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH--ccchHHH
Confidence 3445678887776442211 122222221 23345678889999999999999999999876 3221111
Q ss_pred cccccc-cccCCCCccCHHHHHHHHH
Q psy8789 183 FTDSYS-HYSSDGQTVTASELTNFLI 207 (851)
Q Consensus 183 ~~~~f~-~~~~~~~~lt~~ef~~FL~ 207 (851)
....|. .+.++++.||.+||..+|.
T Consensus 82 ~~~f~~~~D~n~Dg~IS~~Ef~~cl~ 107 (116)
T cd00252 82 IKPFFESCDLDKDGSISLDEWCYCFI 107 (116)
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 112222 6677788999999999993
No 179
>KOG2643|consensus
Probab=95.79 E-value=0.019 Score=63.30 Aligned_cols=131 Identities=10% Similarity=0.164 Sum_probs=72.5
Q ss_pred HHHHHHhHhcCCC-CeeeHHHHHHHHHhcC-CCCCH--HHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhccccccccccc
Q psy8789 113 WLRKHFYSLEGPR-ETVNLKDIKTFLPRVN-CKMST--NKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQMFTDSYS 188 (851)
Q Consensus 113 wlr~~F~~~D~d~-G~Is~~El~~ll~~l~-~~~s~--~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~~~~f~ 188 (851)
-++-.|..+|... |.|+..+...+|-... ++..+ .++++.-.+.+.+ .-.|+++||..|++.+..-.+ ......
T Consensus 319 il~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~-~~gISl~Ef~~Ff~Fl~~l~d-fd~Al~ 396 (489)
T KOG2643|consen 319 ILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDD-GKGISLQEFKAFFRFLNNLND-FDIALR 396 (489)
T ss_pred HHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCC-CCCcCHHHHHHHHHHHhhhhH-HHHHHH
Confidence 3444566677666 6777777665553322 22211 1222332333322 335777777777766533211 112222
Q ss_pred cccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhC
Q psy8789 189 HYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFS 251 (851)
Q Consensus 189 ~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S 251 (851)
+|...+..|+..+|++.-...-+. .+++.-++-++.-||.|++ |.|+.+||+..|-.
T Consensus 397 fy~~Ag~~i~~~~f~raa~~vtGv-eLSdhVvdvvF~IFD~N~D-----g~LS~~EFl~Vmk~ 453 (489)
T KOG2643|consen 397 FYHMAGASIDEKTFQRAAKVVTGV-ELSDHVVDVVFTIFDENND-----GTLSHKEFLAVMKR 453 (489)
T ss_pred HHHHcCCCCCHHHHHHHHHHhcCc-ccccceeeeEEEEEccCCC-----CcccHHHHHHHHHH
Confidence 444444567777777776655443 3555555555666776665 89999999998854
No 180
>KOG0377|consensus
Probab=95.79 E-value=0.023 Score=62.36 Aligned_cols=62 Identities=18% Similarity=0.323 Sum_probs=50.0
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHHHh----cCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHh
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFLPR----VNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNR 175 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll~~----l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~ 175 (851)
|..+|..+|.|+ |.|+++|...+++- ++..++++++.++-..+|-|++|.|++.||++.|+.
T Consensus 549 LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrl 615 (631)
T KOG0377|consen 549 LETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRL 615 (631)
T ss_pred HHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhh
Confidence 455688889888 99999988766543 567788888888888889999999999999888764
No 181
>cd08566 GDPD_AtGDE_like Glycerophosphodiester phosphodiesterase domain of Agrobacterium tumefaciens and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Agrobacterium tumefaciens glycerophosphodiester phosphodiesterase (AtGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homolgoues. Members in this family shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. AtGDE exists as a hexamer that is a trimer of dimers, which is unique among current known GDPD family members. However, it remains unclear if the hexamer plays a physiological role in AtGDE enzymatic function.
Probab=95.76 E-value=0.027 Score=59.59 Aligned_cols=39 Identities=28% Similarity=0.422 Sum_probs=36.5
Q ss_pred cCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCc
Q psy8789 292 SESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTL 330 (851)
Q Consensus 292 ~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~ 330 (851)
-+-|..+|..|+..||+.||+|+.=-.||.|||.|-.|+
T Consensus 14 pENTl~af~~A~~~g~d~iE~DV~~T~Dg~~vv~HD~~l 52 (240)
T cd08566 14 PENSLAAIEAAIDLGADIVEIDVRRTKDGVLVLMHDDTL 52 (240)
T ss_pred CccHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCCC
Confidence 377899999999999999999999999999999998876
No 182
>KOG3557|consensus
Probab=95.69 E-value=0.0036 Score=71.61 Aligned_cols=61 Identities=36% Similarity=0.658 Sum_probs=52.3
Q ss_pred ceEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCccccCCCCC
Q psy8789 784 SITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEIEPQHN 845 (851)
Q Consensus 784 ~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i~~~~~ 845 (851)
...+.++|||.|++..||+..+||++.|+. +..+||+++...+..|++|.|-+..+.++..
T Consensus 500 ~k~~~~~Ydf~arNs~ELsV~k~E~LEvl~-d~R~WW~~kn~~G~~GyvP~nIL~~~~~~~~ 560 (721)
T KOG3557|consen 500 KKWVLVLYDFQARNSSELSVKKGEVLEVLD-DGRKWWKVKNGHGRAGYVPSNILAPLQPEHT 560 (721)
T ss_pred ceeeeeehhhhcccchhhhhhhhhhhhhhh-ccccceeccCccCCCCCcchhhhccCCCccc
Confidence 458999999999999999999999999987 3469999997655559999999998877543
No 183
>cd08616 PI-PLCXD1c Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing 1. This subfamily corresponds to the catalytic domain present in a group of phosphatidylinositol-specific phospholipase C X domain containing 1 (PI-PLCXD1), 2 (PI-PLCXD2) and 3 (PI-PLCXD3), which are bacterial phosphatidylinositol-specific phospholipase C (PI-PLC, EC 4.6.1.13) sequence homologs found in vertebrates. The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, members in this group contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to
Probab=95.69 E-value=0.063 Score=58.36 Aligned_cols=128 Identities=22% Similarity=0.272 Sum_probs=85.3
Q ss_pred CCccccccccccCCccc--c-CCccccCC------------------------CHHHHHHHHhcCccEEEEeeecCC-CC
Q psy8789 269 TKPLSHYFINSSHNTYL--T-GDQFSSES------------------------SCEAYVRCLRQGCRCIELDCWDGP-DG 320 (851)
Q Consensus 269 ~~pl~~Y~i~sshntyl--~-~~q~~~~s------------------------s~~~y~~~l~~gcRcveld~wdg~-~~ 320 (851)
+.||++..|--|||+-- + .+.-.|+. =......-|..|+|.+.|.+--.+ ++
T Consensus 7 ~~~L~~l~iPGsHdS~ty~~~~~s~~~pd~~~~~~~~~~~~~~~~~v~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~ 86 (290)
T cd08616 7 DKPLTNLAIPGSHDSFTYSIDKQSPVSPDQSVQNLVKVFPCIFKKIVKKWSKTQSLTITEQLEAGIRYFDLRIATKPKDN 86 (290)
T ss_pred hCchheEecCCCCCccceecCCCCCCCchhhhhhhhhhcccchhhhhhHHhhCCCCcHHHHHhcCceEEEEEecccCCCC
Confidence 47999999999999642 2 21111111 011233557889999999996443 56
Q ss_pred CceEeecCCceeeeehHHHHHHHhhcccccCCCceEEEeccCC---CHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCC
Q psy8789 321 TPIVYHGHTLTTKIKFKDVVKTIRDHAFETSKYPVILSIEDNC---SLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPS 397 (851)
Q Consensus 321 ~p~v~hg~t~t~~i~~~~v~~~i~~~af~~s~yP~ils~e~hc---~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lps 397 (851)
+-.++||-. + .++.||++.|+++.=....=-|||.+. |+ +.++-..+.+.|.++||+.|+.. . . ...-|+
T Consensus 87 ~~~~~Hg~~--~-~~~~~~L~~i~~fl~~~p~Evvil~~~-~~~~~~~~~~~~l~~~l~~~fg~~l~~~-~-~-~~~~~t 159 (290)
T cd08616 87 DLYFVHGLY--G-ILVKEILEEINDFLTEHPKEVVILDFN-HFYGMTEEDHEKLLKMIKSIFGKKLCPR-D-P-DLLNVT 159 (290)
T ss_pred cEEEEEecc--c-hhHHHHHHHHHHHHHHCCCcEEEEEEE-ccCCCCHHHHHHHHHHHHHHhcccccCC-C-C-CcCcCc
Confidence 667999843 2 299999999998753333345888886 54 34555678889999999999842 1 1 134478
Q ss_pred hhhhhc
Q psy8789 398 PHQLRG 403 (851)
Q Consensus 398 p~~l~~ 403 (851)
.++|..
T Consensus 160 L~~l~~ 165 (290)
T cd08616 160 LEYLWE 165 (290)
T ss_pred HHHHHh
Confidence 899974
No 184
>KOG3771|consensus
Probab=95.68 E-value=0.0051 Score=68.47 Aligned_cols=56 Identities=27% Similarity=0.186 Sum_probs=45.8
Q ss_pred CceEEEEEEeecCCCCCCcccCCCCEEEEeEec-CCCeEEEEECCceEEEecCCCccc
Q psy8789 783 ASITVKALYDYQARNDDELSFPKHAIISNVTRA-EGGWWRGDYGGKRMHWFPSNYVAE 839 (851)
Q Consensus 783 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~-~~gWw~g~~~g~~~G~fP~nyv~~ 839 (851)
....+.++|+|.+++.++|+|..||+|.|+... .+.||.|.+.|.. +-+|.+||..
T Consensus 399 ~~~~v~a~~dy~a~~~deLsf~~gd~i~vi~s~~~~e~~eg~~mg~k-e~~~~~~~~~ 455 (460)
T KOG3771|consen 399 FLYKVKALHDYAAQDTDELSFEAGDVILVIPSDNPEEQDEGWLMGVK-ESDWNGLFPL 455 (460)
T ss_pred CccceeccccccccccccccccCCCEEEEecCCCccchhhHHHhhhc-ccccccceec
Confidence 446799999999999999999999999999855 4699999988765 5566666643
No 185
>cd08568 GDPD_TmGDE_like Glycerophosphodiester phosphodiesterase domain of Thermotoga maritime and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermotoga maritime glycerophosphodiester phosphodiesterase (TmGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. TmGDE exists as a monomer that might be the biologically relevant form.
Probab=95.62 E-value=0.039 Score=57.75 Aligned_cols=41 Identities=32% Similarity=0.562 Sum_probs=37.6
Q ss_pred cccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCc
Q psy8789 290 FSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTL 330 (851)
Q Consensus 290 ~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~ 330 (851)
..-+-|.+++..|+..||+.||+|++=-.||+|||+|-.|+
T Consensus 11 ~~pENTl~af~~A~~~Gad~iE~DV~lT~Dg~~Vv~HD~~l 51 (226)
T cd08568 11 KYPENTLEAFKKAIEYGADGVELDVWLTKDGKLVVLHDENL 51 (226)
T ss_pred CCCcchHHHHHHHHHcCcCEEEEEEEEcCCCCEEEECCCcc
Confidence 34578999999999999999999999999999999998776
No 186
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=95.55 E-value=0.019 Score=39.80 Aligned_cols=28 Identities=14% Similarity=0.417 Sum_probs=19.7
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHHH-hcC
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFLP-RVN 141 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll~-~l~ 141 (851)
++++|..+|.|+ |.|+.+|+..+|+ ++|
T Consensus 2 l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 2 LREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 356777778877 8888888888777 454
No 187
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=95.52 E-value=0.029 Score=49.40 Aligned_cols=48 Identities=21% Similarity=0.273 Sum_probs=35.4
Q ss_pred cCHHHHHHHHHH-----hcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhC
Q psy8789 197 VTASELTNFLIR-----EQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFS 251 (851)
Q Consensus 197 lt~~ef~~FL~~-----~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S 251 (851)
|+.+||+..|+. .+ ...+++++.++|+.++.+++ |.|+|++|+.++..
T Consensus 27 I~~~eL~~ll~~~~~~~lg--~~~~~~~v~~~i~~~D~n~d-----G~v~f~eF~~li~~ 79 (88)
T cd05027 27 LKKSELKELINNELSHFLE--EIKEQEVVDKVMETLDSDGD-----GECDFQEFMAFVAM 79 (88)
T ss_pred ECHHHHHHHHHHHhHHHhc--CCCCHHHHHHHHHHhCCCCC-----CcCcHHHHHHHHHH
Confidence 666666666654 22 23466789999999988776 89999999998753
No 188
>cd08584 PI-PLCc_GDPD_SF_unchar2 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=95.51 E-value=0.043 Score=55.26 Aligned_cols=70 Identities=17% Similarity=0.217 Sum_probs=54.3
Q ss_pred CHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHHHHHHhhcccccCCCceEEEeccCCCHHHHHHHHHH
Q psy8789 295 SCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIRDHAFETSKYPVILSIEDNCSLPQQRVMAQI 374 (851)
Q Consensus 295 s~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~~~af~~s~yP~ils~e~hc~~~~q~~~a~~ 374 (851)
+..++.+|+.. .-||+|++.- ||++||.|-.|+..-.+|++|++++. ..+++|-+- ...-...+++.
T Consensus 8 Tl~AF~~A~~~--dgvE~DVr~t-Dg~lVV~HD~~l~~~PtLeEvL~~~~-------~~~l~inIK---~~~l~~~l~~l 74 (192)
T cd08584 8 TITALKRTFEN--FGVETDIRDY-GGQLVISHDPFVKNGELLEDWLKEYN-------HGTLILNIK---AEGLELRLKKL 74 (192)
T ss_pred HHHHHHHHHHC--CEEEEEEEee-CCeEEEECCCCCCCCCCHHHHHHhcc-------cccEEEEEC---chhHHHHHHHH
Confidence 58899999998 9999999988 99999999999988888999998874 345555544 22344455555
Q ss_pred HHH
Q psy8789 375 MLD 377 (851)
Q Consensus 375 ~~~ 377 (851)
+++
T Consensus 75 i~~ 77 (192)
T cd08584 75 LAE 77 (192)
T ss_pred HHh
Confidence 554
No 189
>cd08563 GDPD_TtGDE_like Glycerophosphodiester phosphodiesterase domain of Thermoanaerobacter tengcongensis and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Thermoanaerobacter tengcongensis glycerophosphodiester phosphodiesterase (TtGDE, EC 3.1.4.46) and its uncharacterized homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Despite the fact that most of GDPD family members exist as the monomer, TtGDE can function as a dimeric unit. Its catalytic mechanism is based on the general base-acid catalysis, which is similar to that of phosphoinositide-specific phospholipases C (PI-PLCs, EC 3.1.4.11). A divalent metal cation is required for the enzyme activity of TtGDE.
Probab=95.36 E-value=0.016 Score=60.85 Aligned_cols=41 Identities=29% Similarity=0.451 Sum_probs=38.1
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
.-+.|.++|.+|+..||++||+|++=-.||+|||.|-.|+.
T Consensus 13 ~pENT~~Af~~A~~~g~~~vE~DV~~TkDg~~Vv~HD~~l~ 53 (230)
T cd08563 13 APENTLLAFKKAIEAGADGIELDVHLTKDGQLVVIHDETVD 53 (230)
T ss_pred CCchhHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCCcc
Confidence 46889999999999999999999999999999999998873
No 190
>cd08577 PI-PLCc_GDPD_SF_unchar3 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=95.19 E-value=0.049 Score=56.97 Aligned_cols=97 Identities=19% Similarity=0.277 Sum_probs=66.8
Q ss_pred ccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCcee------eeehHHHHHHHhhcc--c-c
Q psy8789 279 SSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTT------KIKFKDVVKTIRDHA--F-E 349 (851)
Q Consensus 279 sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~------~i~~~~v~~~i~~~a--f-~ 349 (851)
-|||.|.--. ....||..||-.||+|+|=- ||+-+|.|...+.+ .+.+..+.+.++... | .
T Consensus 4 hsHNDY~r~~---------Pl~~Al~~g~~svEaDV~l~-dg~l~V~Hd~~~l~~~~tl~~Lyl~pL~~~l~~~n~~~~~ 73 (228)
T cd08577 4 HSHNDYWRKR---------PLYDALSAGFGSIEADVWLV-NGDLLVAHDEVDLSPARTLESLYLDPLLEILDQNNGQAYN 73 (228)
T ss_pred cccccccccc---------chHHHHHcCCCEEEEeEEEE-CCEEEEEcChhHcCccCCHHHHhHHHHHHHHHHcCCCCCC
Confidence 5899998432 45679999999999999976 68899999866443 355666666665442 3 4
Q ss_pred cCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCC
Q psy8789 350 TSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLI 385 (851)
Q Consensus 350 ~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~ 385 (851)
...-|++|-||..-+...--.+..-.-+-+.+..+.
T Consensus 74 ~~~~~l~LlIDiKt~g~~t~~~l~~~L~~~~~~~~~ 109 (228)
T cd08577 74 DPEQPLQLLIDIKTDGESTYPALEEVLKPYIDIGYL 109 (228)
T ss_pred CCCCceEEEEEECCCChHHHHHHHHHHHHHHhcCce
Confidence 456799999999997554323333333346666554
No 191
>KOG4566|consensus
Probab=95.19 E-value=0.032 Score=58.58 Aligned_cols=87 Identities=25% Similarity=0.350 Sum_probs=68.6
Q ss_pred CCCCCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCCeeeEEEEEEcCcEEEe------CCc--ccC
Q psy8789 656 QHEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAEDKIKHCRIRVEGRLYTI------GTT--QFE 727 (851)
Q Consensus 656 ~~~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~~v~H~~I~~~~~~~~~------~~~--~F~ 727 (851)
.+....||+|.+++.+|+..|...+ .|.||||+|...+-.+.|++......+-.+|...++.|.. ... .|+
T Consensus 48 ~~~~~g~~w~~~~~~~~~~~l~~~p-~~~~l~Rdss~~~~~~~I~vk~~~g~~~~r~~~~~~sfr~ds~~~~~~pl~~~e 126 (258)
T KOG4566|consen 48 LLDSSGHYWGLETANEAELCLGQEP-RGTFLVRDSSHRPYLFTISVKTHSGPKNLRIQYQDSSFRLDSSHRHTPPLISFE 126 (258)
T ss_pred ccccCCcccccccchhHHHhhcCCC-ccceeeecCcCccccceeEeeeccCCCCccccccccceecccccccCCCcccCh
Confidence 4566789999999999998888886 9999999998888889999998777777777774443333 222 899
Q ss_pred CHHHHHHHhhhCCCcc
Q psy8789 728 SLVELISYYERHPLYK 743 (851)
Q Consensus 728 sl~eLV~~y~~~~l~~ 743 (851)
....+|++|....+..
T Consensus 127 ~~~~~~~~y~~~~~~~ 142 (258)
T KOG4566|consen 127 DVEVLIHHYRQSRKAD 142 (258)
T ss_pred hHHHHHHhhhhhhhcc
Confidence 9999999995554433
No 192
>cd08564 GDPD_GsGDE_like Glycerophosphodiester phosphodiesterase domain of putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative Galdieria sulphuraria glycerophosphodiester phosphodiesterase (GsGDE, EC 3.1.4.46) and its uncharacterized eukaryotic homologs. Members in this family show high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=95.15 E-value=0.073 Score=57.18 Aligned_cols=39 Identities=28% Similarity=0.498 Sum_probs=36.1
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCC
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHT 329 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t 329 (851)
.-+-|..+|..|+..|+..||+|++=-.||+|||+|..+
T Consensus 18 ~pENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~ 56 (265)
T cd08564 18 YPENTLPSFRRALEIGVDGVELDVFLTKDNEIVVFHGTE 56 (265)
T ss_pred CCchhHHHHHHHHHcCCCEEEEeeEECCCCCEEEEcCCc
Confidence 568899999999999999999999998899999999864
No 193
>cd08575 GDPD_GDE4_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function is not elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests mammalian GDE4 may play some distinct role from other members of mammalian GDEs family. Also included in this subfamily are uncharacterized mammalian glycerophosphodiester phosphodiesterase domain-containing protein 3 (GDPD3) and similar proteins which display very high sequence homology to mammalian GDE4.
Probab=95.03 E-value=0.022 Score=61.08 Aligned_cols=40 Identities=28% Similarity=0.502 Sum_probs=37.4
Q ss_pred cCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 292 SESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 292 ~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
-+-|.++|..|+..||++||+|++=-.||+|||+|-.|+.
T Consensus 14 pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~ 53 (264)
T cd08575 14 PENTIAAFRHAVKNGADMLELDVQLTKDGQVVVFHDWDLD 53 (264)
T ss_pred CccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEEcCCccc
Confidence 4779999999999999999999999999999999998864
No 194
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=95.00 E-value=0.062 Score=44.06 Aligned_cols=52 Identities=12% Similarity=0.050 Sum_probs=37.9
Q ss_pred ccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHh
Q psy8789 190 YSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLF 250 (851)
Q Consensus 190 ~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~ 250 (851)
+.++++.|+.+||..+|...+ .+++++..++..++.+.+ |.|++++|+.++.
T Consensus 9 D~~~~G~i~~~el~~~l~~~g----~~~~~~~~i~~~~d~~~~-----g~i~~~ef~~~~~ 60 (67)
T cd00052 9 DPDGDGLISGDEARPFLGKSG----LPRSVLAQIWDLADTDKD-----GKLDKEEFAIAMH 60 (67)
T ss_pred CCCCCCcCcHHHHHHHHHHcC----CCHHHHHHHHHHhcCCCC-----CcCCHHHHHHHHH
Confidence 344566788888888877542 256678888888877655 7899999988764
No 195
>KOG3775|consensus
Probab=94.84 E-value=0.014 Score=62.59 Aligned_cols=63 Identities=21% Similarity=0.361 Sum_probs=53.5
Q ss_pred CceEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEE-ECCceEEEecCCCccccCCCCC
Q psy8789 783 ASITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGD-YGGKRMHWFPSNYVAEIEPQHN 845 (851)
Q Consensus 783 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~-~~g~~~G~fP~nyv~~i~~~~~ 845 (851)
+.+.-++++.|.++-++||.+..||-|.|-...++-|.+|. ++.+.+|+||+.|+-+++-..+
T Consensus 261 qe~THR~~~rFvPRHpDELeLEIgDav~Ve~eadD~W~~G~NlRTG~~GIFPA~ya~evd~~ee 324 (482)
T KOG3775|consen 261 QEQTHRAVFRFVPRHPDELELEIGDAVLVEAEADDFWFEGFNLRTGERGIFPAFYAHEVDGPEE 324 (482)
T ss_pred hchhhhhhhhccCCCcceeeeecCCeeEeeecccchhhccccccccccccccceeEEecCCchh
Confidence 34567899999999999999999999999888889999997 4556669999999988876554
No 196
>cd08561 GDPD_cytoplasmic_ScUgpQ2_like Glycerophosphodiester phosphodiesterase domain of Streptomyces coelicolor cytoplasmic phosphodiesterases UgpQ2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized cytoplasmic phosphodiesterases which predominantly exist in bacteria. The prototype of this family is a putative cytoplasmic phosphodiesterase encoded by gene ulpQ2 (SCO1419) in the Streptomyces coelicolor genome. It is distantly related to the Escherichia coli cytoplasmic phosphodiesterases UgpQ that catalyzes the hydrolysis of glycerophosphodiesters at the inner side of the cytoplasmic membrane to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=94.82 E-value=0.027 Score=59.92 Aligned_cols=41 Identities=27% Similarity=0.417 Sum_probs=37.7
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
.-+-|.++|.+|+..||++||+|++=-.||+|||+|-.|+.
T Consensus 11 ~pENT~~af~~A~~~g~d~vE~Dv~~TkDg~~Vv~HD~~l~ 51 (249)
T cd08561 11 APENTLLAFEDAVELGADVLETDVHATKDGVLVVIHDETLD 51 (249)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeECCCCCEEEECCCccc
Confidence 45789999999999999999999999999999999998874
No 197
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=94.80 E-value=0.041 Score=48.51 Aligned_cols=52 Identities=13% Similarity=0.320 Sum_probs=39.5
Q ss_pred CCccCHHHHHHHHHHhcCcCcCC----HHHHHHHHHHhccccccccCCCcccHHHHHHHHhC
Q psy8789 194 GQTVTASELTNFLIREQNETNVN----EREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFS 251 (851)
Q Consensus 194 ~~~lt~~ef~~FL~~~Q~e~~~s----~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S 251 (851)
.+.|+.+||+.+|....++ ..+ ++++..+++.++.+.+ |.|+|++|+.+|.+
T Consensus 24 ~~~Is~~El~~ll~~~~g~-~~t~~~~~~~v~~i~~~~D~d~d-----G~I~f~eF~~~~~~ 79 (88)
T cd05030 24 PDTLYKKEFKQLVEKELPN-FLKKEKNQKAIDKIFEDLDTNQD-----GQLSFEEFLVLVIK 79 (88)
T ss_pred cccCCHHHHHHHHHHHhhH-hhccCCCHHHHHHHHHHcCCCCC-----CcCcHHHHHHHHHH
Confidence 4578888888888643222 233 6789999999987665 89999999998864
No 198
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=94.80 E-value=0.052 Score=48.60 Aligned_cols=63 Identities=6% Similarity=0.098 Sum_probs=45.0
Q ss_pred HHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhccccccccccc-cccCCCCccCHHHHHHHHHHh
Q psy8789 147 NKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQMFTDSYS-HYSSDGQTVTASELTNFLIRE 209 (851)
Q Consensus 147 ~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~~~~f~-~~~~~~~~lt~~ef~~FL~~~ 209 (851)
..+++.|+.+|.+++|.|+++|+..+++.+-...+.....+. .+.++++.|+.+||..++...
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~ 73 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLI 73 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 355688999999999999999999998775322111122232 445667789999999888643
No 199
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=94.79 E-value=0.031 Score=38.77 Aligned_cols=27 Identities=26% Similarity=0.502 Sum_probs=23.7
Q ss_pred HHHHHHhhhcCCCCCCcCHHHHHHHHH
Q psy8789 148 KLREHFQEVDTRKTNELAFDEFSILYN 174 (851)
Q Consensus 148 ~l~~~f~e~D~~~~g~L~f~EF~~~~~ 174 (851)
+++.+|+.+|.|++|.|+++||..+++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 467899999999999999999999887
No 200
>cd08574 GDPD_GDE_2_3_6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2, GDE3, GDE6-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase domain-containing protein subtype 5 (GDE2), subtype 2 (GDE3), subtype 1 (GDE6), and their eukaryotic homologs. Mammalian GDE2, GDE3, and GDE6 show very high sequence similarity to each other and have been classified into the same family. Although they are all transmembrane proteins, based on different pattern of tissue distribution, these enzymes might display diverse cellular functions. Mammalian GDE2 is primarily expressed in mature neurons. It selectively hydrolyzes glycerophosphocholine (GPC) and mainly functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differentiation in the spinal cord. Mammalian GDE3 is specifically expressed in bo
Probab=94.70 E-value=0.03 Score=59.65 Aligned_cols=41 Identities=27% Similarity=0.442 Sum_probs=37.7
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
.-+-|..+|..|+..||..||+|++=-.||+|||+|-.||.
T Consensus 14 aPENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVV~HD~~l~ 54 (252)
T cd08574 14 APENTLMSFEKALEHGVYGLETDVTISYDGVPFLMHDRTLR 54 (252)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEEeEccCCcEEEeCCCccc
Confidence 34779999999999999999999999999999999998863
No 201
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=94.70 E-value=0.054 Score=48.07 Aligned_cols=50 Identities=18% Similarity=0.356 Sum_probs=33.9
Q ss_pred cCHHHHHHHHHHhcCc---CcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhC
Q psy8789 197 VTASELTNFLIREQNE---TNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFS 251 (851)
Q Consensus 197 lt~~ef~~FL~~~Q~e---~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S 251 (851)
|+.+||+..|+...+. ...++++++++|+.++.+.+ |.|+|++|+.+|.+
T Consensus 28 Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~-----G~I~f~eF~~l~~~ 80 (92)
T cd05025 28 LSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGD-----GEVDFQEFVVLVAA 80 (92)
T ss_pred ECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCC-----CcCcHHHHHHHHHH
Confidence 5555555555431111 12356789999999987765 88999999998763
No 202
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=94.68 E-value=0.1 Score=47.00 Aligned_cols=57 Identities=9% Similarity=0.084 Sum_probs=44.2
Q ss_pred CcccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 25 AIAKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 25 ~k~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
.+..+.|+|..|+.|..-.... .....+|+|++.. .++.|.|+|++|++.|+..|+.
T Consensus 41 ~~~~g~I~L~~i~~ve~v~~~~-----------~~~~~~fqivt~~----r~~yi~a~s~~E~~~Wi~al~k 97 (98)
T cd01244 41 CKKSALIKLAAIKGTEPLSDKS-----------FVNVDIITIVCED----DTMQLQFEAPVEATDWLNALEK 97 (98)
T ss_pred CceeeeEEccceEEEEEcCCcc-----------cCCCceEEEEeCC----CeEEEECCCHHHHHHHHHHHhc
Confidence 4667899999999886432210 1124699999975 5899999999999999999975
No 203
>KOG3725|consensus
Probab=94.68 E-value=0.01 Score=60.37 Aligned_cols=56 Identities=29% Similarity=0.538 Sum_probs=50.0
Q ss_pred ceEEEEEEeecCCCCCCcccCCCCEEEEeEec--CCCeEEEEECCceEEEecCCCcccc
Q psy8789 784 SITVKALYDYQARNDDELSFPKHAIISNVTRA--EGGWWRGDYGGKRMHWFPSNYVAEI 840 (851)
Q Consensus 784 ~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~--~~gWw~g~~~g~~~G~fP~nyv~~i 840 (851)
..+++++|||.+..+.||++-..|+|+|.+.. +.+|..|+.+++. |-+|..|++.+
T Consensus 317 trkArVlyDYdAa~s~ElslladeiitVyslpGMD~dwlmgErGnkk-GKvPvtYlELL 374 (375)
T KOG3725|consen 317 TRKARVLYDYDAALSQELSLLADEIITVYSLPGMDADWLMGERGNKK-GKVPVTYLELL 374 (375)
T ss_pred ccceeeeecccccchhhhhhhhcceEEEEecCCCChHHhhhhhcCCC-CCcchhHHHhc
Confidence 35789999999999999999999999998754 6799999998887 99999999865
No 204
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=94.67 E-value=0.049 Score=35.87 Aligned_cols=24 Identities=8% Similarity=0.405 Sum_probs=21.0
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHH
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFL 137 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll 137 (851)
|++.|..+|.|+ |+|+.+|+.+++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 467899999999 999999999864
No 205
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=94.63 E-value=0.078 Score=46.71 Aligned_cols=60 Identities=13% Similarity=0.316 Sum_probs=43.5
Q ss_pred ccccccCCCCccCHHHHHHHHHHhcCc---CcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHh
Q psy8789 186 SYSHYSSDGQTVTASELTNFLIREQNE---TNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLF 250 (851)
Q Consensus 186 ~f~~~~~~~~~lt~~ef~~FL~~~Q~e---~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~ 250 (851)
.|..|+.+.+.|+..||+..|+.+=.. ...+.+.+.++|...|.|.+ |.++|.||+.++.
T Consensus 13 ~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~D-----g~vdF~EF~~Lv~ 75 (91)
T cd05024 13 TFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRD-----GKVGFQSFFSLIA 75 (91)
T ss_pred HHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCC-----CcCcHHHHHHHHH
Confidence 355666666678888888887654321 11234789999999998877 8899999999875
No 206
>KOG2562|consensus
Probab=94.53 E-value=0.2 Score=56.02 Aligned_cols=89 Identities=12% Similarity=0.220 Sum_probs=64.1
Q ss_pred HhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcC----CCCCCcCHHHHHHHHHhhhcccc--ccccccc-c
Q psy8789 118 FYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDT----RKTNELAFDEFSILYNRIMFDEQ--MFTDSYS-H 189 (851)
Q Consensus 118 F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~----~~~g~L~f~EF~~~~~~l~~r~~--~~~~~f~-~ 189 (851)
|+..|+|. |-|+-++|++.... -.+..-+..+|..+-. -.+|.++|++|+-|+-.+..+.. ..+.-|. .
T Consensus 284 FweLD~Dhd~lidk~~L~ry~d~---tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~t~~SleYwFrcl 360 (493)
T KOG2562|consen 284 FWELDTDHDGLIDKEDLKRYGDH---TLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKDTPASLEYWFRCL 360 (493)
T ss_pred HhhhccccccccCHHHHHHHhcc---chhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhccCCCccchhhheeee
Confidence 88899999 99999999887643 2345566789984432 34889999999999877654422 2222243 5
Q ss_pred ccCCCCccCHHHHHHHHHHh
Q psy8789 190 YSSDGQTVTASELTNFLIRE 209 (851)
Q Consensus 190 ~~~~~~~lt~~ef~~FL~~~ 209 (851)
|-+++|.|+..|++-|....
T Consensus 361 Dld~~G~Lt~~el~~fyeeq 380 (493)
T KOG2562|consen 361 DLDGDGILTLNELRYFYEEQ 380 (493)
T ss_pred eccCCCcccHHHHHHHHHHH
Confidence 66778899999999888654
No 207
>KOG0046|consensus
Probab=94.51 E-value=0.083 Score=59.52 Aligned_cols=184 Identities=19% Similarity=0.258 Sum_probs=106.5
Q ss_pred HHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCC---CHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcccccc-c---
Q psy8789 113 WLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKM---STNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQMF-T--- 184 (851)
Q Consensus 113 wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~---s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~-~--- 184 (851)
=+++.|.++| ++ |.+++.|+..++.+.+... ..+++++++.+.+.|.+|.++|++|+..|-.+..+.-.. .
T Consensus 20 ~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~s~~~~k~~~g~ 98 (627)
T KOG0046|consen 20 ELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLKSKDIAKIGEGI 98 (627)
T ss_pred HHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhhhhhhhhhcCCc
Confidence 4688899999 66 9999999999999876543 367888999999999999999999999887765442100 0
Q ss_pred ---cccccccCCC--CccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhcc-ccccccCCCcccHHHHHHHHhCcCcc---
Q psy8789 185 ---DSYSHYSSDG--QTVTASELTNFLIREQNETNVNEREVSRHMRDYLQ-DEQRNVQEPYFTFMEFIDFLFSKQNE--- 255 (851)
Q Consensus 185 ---~~f~~~~~~~--~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~-d~~~~~~~g~ls~deF~~fL~S~~n~--- 255 (851)
-.|...+..+ -.++.+|=..|... |++|.. |++-. .---|+-+.|--|-.-++.-
T Consensus 99 ~~~~~~~~~sst~~~Hti~eeEk~~fv~h---------------IN~~L~~Dpdl~-~~lPinp~t~~lf~~vkDGvlLc 162 (627)
T KOG0046|consen 99 KAASGTLKGSSTGTQHTINEEEKRAFVNH---------------INSYLEGDPDLK-HLLPINPNTNDLFDLVKDGVLLC 162 (627)
T ss_pred ccccceeecccccceeeecHHHHHHHHHH---------------HHHHhcCCcchh-hcCCCCCchHHHHHHhccceeee
Confidence 0011111110 11444444444332 333321 11100 00113333444443323321
Q ss_pred -hhhhh-cccc---ccCcCCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeec
Q psy8789 256 -LWDQQ-YDAI---HQDMTKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHG 327 (851)
Q Consensus 256 -~~~~~-~~~~---~~dm~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg 327 (851)
+++-. ...| --+-..+|+-|=++=-||- +.-.|=.-||-.|-|+--|=..|.|-..=|
T Consensus 163 KlIN~svPdTIDERaiN~kk~Lnp~~~~EN~~l--------------~lnSAkAiGc~VvNIga~Dl~eGrphLVLG 225 (627)
T KOG0046|consen 163 KLINLSVPDTIDERAINTKKKLNPFERNENLNL--------------ALNSAKAIGCTVVNIGAQDLAEGRPHLVLG 225 (627)
T ss_pred hhhcccCCCchhhhhhccCCcCChhhhccchhh--------------HHhhcccccceEEecCchhhhcCCceeeHH
Confidence 22211 0111 1122678888777665554 334455679999999999988899965555
No 208
>cd08567 GDPD_SpGDE_like Glycerophosphodiester phosphodiesterase domain of putative Silicibacter pomeroyi glycerophosphodiester phosphodiesterase and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and similar proteins. The prototype of this CD is a putative GP-GDE from Silicibacter pomeroyi (SpGDE). It shows high sequence similarity to Escherichia coli GP-GDE, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=94.44 E-value=0.04 Score=58.99 Aligned_cols=40 Identities=30% Similarity=0.429 Sum_probs=37.6
Q ss_pred cCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 292 SESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 292 ~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
-+-|.++|..|+..||..||+|++=-.||.|||+|..|+.
T Consensus 14 pENT~~Af~~A~~~Gad~vE~DV~~TkDg~~Vv~HD~~l~ 53 (263)
T cd08567 14 PENTLPAFAKALDLGVDTLELDLVLTKDGVIVVSHDPKLN 53 (263)
T ss_pred CcchHHHHHHHHHcCCCEEEEEEEEcCCCCEEEeCCCccC
Confidence 4778999999999999999999999999999999999974
No 209
>cd08612 GDPD_GDE4 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE4 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 1 (GDPD1)) and similar proteins. Mammalian GDE4 is a transmembrane protein whose cellular function has not yet been elucidated. It is expressed widely, including in placenta, liver, kidney, pancreas, spleen, thymus, ovary, small intestine and peripheral blood leukocytes. It is also expressed in the growth cones in neuroblastoma Neuro2a cells, which suggests GDE4 may play some distinct role from other members of the GDE family.
Probab=94.38 E-value=0.041 Score=60.23 Aligned_cols=41 Identities=29% Similarity=0.444 Sum_probs=37.6
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
.-+-|.+++..|+..||+.||+|+|=-.||+|||+|-.|+.
T Consensus 39 ~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVV~HD~~l~ 79 (300)
T cd08612 39 NLENTMEAFEHAVKVGTDMLELDVHLTKDGQVVVSHDENLL 79 (300)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECcCCeEEEECCcccc
Confidence 34779999999999999999999999999999999998863
No 210
>cd08581 GDPD_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity to Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=94.29 E-value=0.043 Score=57.56 Aligned_cols=41 Identities=29% Similarity=0.541 Sum_probs=37.6
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
.-+-|..+|.+|+..||..||+|++=-.||+|||.|-.|+.
T Consensus 11 ~PENTl~Af~~A~~~gad~iE~DV~lTkDg~~Vv~HD~~l~ 51 (229)
T cd08581 11 YPENTLVGFRAAVDAGARFVEFDVQLSADGVPVVFHDDTLL 51 (229)
T ss_pred CCccHHHHHHHHHHcCCCEEEEeeeECCCCcEEEECCCccc
Confidence 34778999999999999999999999999999999998874
No 211
>cd08607 GDPD_GDE5 Glycerophosphodiester phosphodiesterase domain of putative mammalian glycerophosphodiester phosphodiesterase GDE5 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in putative mammalian GDE5 and similar proteins. Mammalian GDE5 is widely expressed in mammalian tissues, with highest expression in the spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. In addition to C-terminal GDPD domain, all members in this subfamily have a starch binding domain (CBM20) in the N-terminus, which suggests these proteins may play a distinct role in glycerol metabolism.
Probab=94.22 E-value=0.048 Score=59.36 Aligned_cols=49 Identities=24% Similarity=0.460 Sum_probs=42.1
Q ss_pred cccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCcee
Q psy8789 284 YLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTT 332 (851)
Q Consensus 284 yl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~ 332 (851)
|+.+.-..-+.|..+|..|+..||..||+|++=-.||+|||+|-.|+..
T Consensus 12 ~~~~~~~~PENTl~af~~A~~~Gad~iE~DV~lTkDg~~VV~HD~~l~r 60 (290)
T cd08607 12 YTAASAVVRENTIASFLQAAEHGADMVEFDVQLTKDLVPVVYHDFTLRV 60 (290)
T ss_pred cccccCCCCccHHHHHHHHHHcCCCEEEEEEEEccCCeEEEEcCCeeEe
Confidence 4444445568899999999999999999999999999999999998743
No 212
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=94.20 E-value=0.15 Score=46.55 Aligned_cols=62 Identities=23% Similarity=0.170 Sum_probs=43.5
Q ss_pred CcccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 25 AIAKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 25 ~k~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
.+..+.|+|..+..|..-.....-. .......||.|+... .++.+.|+|++|++.|+..|+.
T Consensus 44 ~~~kG~I~L~~~~~ve~~~~~~~~~------~~~~~~~~F~i~t~~----r~~yl~A~s~~er~~WI~ai~~ 105 (106)
T cd01238 44 GSKKGSIDLSKIKCVETVKPEKNPP------IPERFKYPFQVVHDE----GTLYVFAPTEELRKRWIKALKQ 105 (106)
T ss_pred cCcceeEECCcceEEEEecCCcCcc------cccccCccEEEEeCC----CeEEEEcCCHHHHHHHHHHHHh
Confidence 3566899999987765432221100 011235899999975 5788999999999999999975
No 213
>cd08580 GDPD_Rv2277c_like Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial protein Rv2277c and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial protein Rv2277c and similar proteins. Members in this subfamily are bacterial homologous of mammalian GDE4, a transmembrane protein whose cellular function has not yet been elucidated.
Probab=94.19 E-value=0.055 Score=57.90 Aligned_cols=42 Identities=26% Similarity=0.361 Sum_probs=38.1
Q ss_pred cccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 290 FSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 290 ~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
+.-+-|..+|..|+..||..||+|++=-.||+|||.|-.|+.
T Consensus 12 ~~PENTl~Af~~A~~~G~d~iE~DV~lTkDg~lVv~HD~~l~ 53 (263)
T cd08580 12 DAPENTLLAISKALANGADAIWLTVQLSKDGVPVLYRPSDLK 53 (263)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEeEECCCCCEEEeCCCchh
Confidence 345779999999999999999999999999999999998863
No 214
>cd08601 GDPD_SaGlpQ_like Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) from Staphylococcus aureus, Bacillus subtilis and similar proteins. Members in this family show very high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=94.18 E-value=0.048 Score=58.21 Aligned_cols=40 Identities=33% Similarity=0.394 Sum_probs=37.5
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCc
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTL 330 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~ 330 (851)
.-+-|..+|..|+..||..||+|+|=-.||.|||+|-.|+
T Consensus 13 ~pENT~~af~~A~~~G~d~vE~DV~lTkDg~~Vv~HD~~l 52 (256)
T cd08601 13 APEHTFAAYDLAREMGADYIELDLQMTKDGVLVAMHDETL 52 (256)
T ss_pred CCCchHHHHHHHHHcCCCEEEEEeeECCCCeEEEeCCCcc
Confidence 3588999999999999999999999999999999999886
No 215
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=94.16 E-value=0.094 Score=46.74 Aligned_cols=52 Identities=21% Similarity=0.381 Sum_probs=36.4
Q ss_pred CccCHHHHHHHHHHhcC---cCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhC
Q psy8789 195 QTVTASELTNFLIREQN---ETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFS 251 (851)
Q Consensus 195 ~~lt~~ef~~FL~~~Q~---e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S 251 (851)
|.|+.+||+..|+...+ ....+++++..+++.++.+++ |.|++++|+.+|.+
T Consensus 25 G~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~d-----g~I~f~eF~~l~~~ 79 (94)
T cd05031 25 NTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRD-----GKVNFEEFVSLVAG 79 (94)
T ss_pred CeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCC-----CcCcHHHHHHHHHH
Confidence 56666666666654111 123456788999999987765 88999999998864
No 216
>PRK11143 glpQ glycerophosphodiester phosphodiesterase; Provisional
Probab=94.10 E-value=0.057 Score=60.37 Aligned_cols=42 Identities=26% Similarity=0.302 Sum_probs=38.4
Q ss_pred cccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 290 FSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 290 ~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
+.-+.|.++|..|+..|+.-||+|+|=-.||.|||+|..++.
T Consensus 38 ~~PENTl~Af~~A~~~GaD~IE~DV~lTkDg~lVv~HD~~l~ 79 (355)
T PRK11143 38 YLPEHTLPAKAMAYAQGADYLEQDLVMTKDDQLVVLHDHYLD 79 (355)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEccCCcEEEeCCchhc
Confidence 344889999999999999999999999999999999998764
No 217
>cd08605 GDPD_GDE5_like_1_plant Glycerophosphodiester phosphodiesterase domain of uncharacterized plant glycerophosphodiester phosphodiesterase-like proteins similar to mammalian GDE5. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized plant glycerophosphodiester phosphodiesterase (GP-PDE)-like proteins. Members in this family show very high sequence homology to mammalian glycerophosphodiester phosphodiesterase GDE5 and are distantly related to plant GP-PDEs.
Probab=94.06 E-value=0.048 Score=59.11 Aligned_cols=38 Identities=21% Similarity=0.529 Sum_probs=36.5
Q ss_pred CCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCc
Q psy8789 293 ESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTL 330 (851)
Q Consensus 293 ~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~ 330 (851)
+-+..++.+|+..||..||+|++=-.||.|||+|-.|+
T Consensus 25 ENTl~Af~~A~~~Gad~vE~DV~lTkDg~~VV~HD~~l 62 (282)
T cd08605 25 ENTIASFIAASKFGADFVEFDVQVTRDGVPVIWHDDFI 62 (282)
T ss_pred CcHHHHHHHHHHcCCCEEEEEEEECcCCeEEEECCCce
Confidence 67899999999999999999999999999999999988
No 218
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=93.85 E-value=0.15 Score=46.33 Aligned_cols=58 Identities=19% Similarity=0.278 Sum_probs=46.7
Q ss_pred ccCcccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 23 PCAIAKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 23 ~~~k~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
+.++..+.|||.+..+|..|...+ ..+.+|+|+... .+..|+|+|++|.+.|+..|..
T Consensus 45 ~~~~p~G~IdL~~~~~V~~~~~~~------------~~~~~f~I~tp~----R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 45 PTTLPQGTIDMNQCTDVVDAEART------------GQKFSICILTPD----KEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred CCcccceEEEccceEEEeeccccc------------CCccEEEEECCC----ceEEEEeCCHHHHHHHHHHHHh
Confidence 556778999999999999875321 125799998775 6889999999999999998864
No 219
>cd08609 GDPD_GDE3 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE3 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE3 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 2 (GDPD2), Osteoblast differentiation promoting factor) and their metazoan homologs. Mammalian GDE3 is a transmembrane protein specifically expressed in bone tissues and spleen. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE3 has been characterized as glycerophosphoinositol inositolphosphodiesterase (EC 3.1.4.43) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate inositol 1-phosphate (Ins1P) and glycerol. Mammalia
Probab=93.85 E-value=0.059 Score=59.20 Aligned_cols=49 Identities=22% Similarity=0.340 Sum_probs=41.6
Q ss_pred cCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 280 SHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 280 shntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
.|.-+ .-..-+.|..+|..|+..||..||+|++=-.||+|||.|-.|+.
T Consensus 31 AHRGa---s~~aPENTl~AF~~Ai~~GaD~IE~DV~lTkDG~lVV~HD~tL~ 79 (315)
T cd08609 31 GHRGA---PMLAPENTLMSLRKSLECGVVVFETDVMVSKDGVPFLMHDEGLL 79 (315)
T ss_pred ECCCC---CCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEeCCCccc
Confidence 56653 22345889999999999999999999999999999999998864
No 220
>cd08573 GDPD_GDE1 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE1 (also known as MIR16, membrane interacting protein of RGS16) and their metazoan homologs. GDE1 is widely expressed in mammalian tissues, including the heart, brain, liver, and kidney. It shows sequence homology to bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyzes the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. GDE1 has been characterized as GPI-GDE (EC 3.1.4.44) that selectively hydrolyzes extracellular glycerophosphoinositol (GPI) to generate glycerol phosphate and inositol. It functions as an integral membrane-bound glycoprotein interacting with regulator of G protein signaling protein RGS16, and is modulated by G
Probab=93.84 E-value=0.061 Score=57.54 Aligned_cols=40 Identities=25% Similarity=0.463 Sum_probs=37.3
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCc
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTL 330 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~ 330 (851)
.-+-|..+|.+|+..||..||+|++=-.||+|||+|-.++
T Consensus 11 ~pENTl~af~~A~~~Gad~iE~DV~lTkDg~~Vv~HD~~l 50 (258)
T cd08573 11 APENTLAAFRQAKKNGADGVEFDLEFTKDGVPVLMHDDTV 50 (258)
T ss_pred CCccHHHHHHHHHHcCCCEEEEEeeECCCCcEEEECCCCc
Confidence 4577999999999999999999999999999999999886
No 221
>cd08600 GDPD_EcGlpQ_like Glycerophosphodiester phosphodiesterase domain of Escherichia coli (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Escherichia coli periplasmic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46), GlpQ, and similar proteins. GP-GDE plays an essential role in the metabolic pathway of E. coli. It catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. E. coli possesses two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the E. coli glp operon codes for a periplasmic phosphodiesterase GlpQ, which is the prototype of this family. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GP
Probab=93.83 E-value=0.061 Score=59.32 Aligned_cols=42 Identities=29% Similarity=0.329 Sum_probs=38.5
Q ss_pred cccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 290 FSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 290 ~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
+.-+.|.++|..|+..||..||+|++=-.||.|||.|..++.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~ 53 (318)
T cd08600 12 YLPEHTLEAKALAYAQGADYLEQDVVLTKDDKLVVIHDHYLD 53 (318)
T ss_pred CCCccHHHHHHHHHHcCCCEEEeeeeECcCCcEEEeCCchhh
Confidence 455889999999999999999999999999999999998873
No 222
>PRK09454 ugpQ cytoplasmic glycerophosphodiester phosphodiesterase; Provisional
Probab=93.60 E-value=0.06 Score=57.24 Aligned_cols=41 Identities=32% Similarity=0.359 Sum_probs=38.0
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
.-+-|.+++..|+..|+.+||+||.=-.||+|||+|-.|+.
T Consensus 20 ~pENT~~Af~~A~~~G~d~vE~DV~lT~Dg~lVV~HD~~l~ 60 (249)
T PRK09454 20 APENTLAAIDVGARYGHRMIEFDAKLSADGEIFLLHDDTLE 60 (249)
T ss_pred CChHHHHHHHHHHHcCCCEEEEEeeECCCCCEEEECCCccc
Confidence 45779999999999999999999999999999999998874
No 223
>cd08559 GDPD_periplasmic_GlpQ_like Periplasmic glycerophosphodiester phosphodiesterase domain (GlpQ) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in bacterial and eukaryotic glycerophosphodiester phosphodiesterase (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ. GP-GDEs are involved in glycerol metabolism and catalyze the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols, which are major sources of carbon and phosphate. In E. coli, there are two major G3P uptake systems: Glp and Ugp, which contain genes coding for two different GP-GDEs. GlpQ gene from the glp operon codes for a periplasmic phosphodiesterase GlpQ. GlpQ is a dimeric enzyme that hydrolyzes periplasmic glycerophosphodiesters, such as glycerophosphocholine (GPC), glycerophosphoethanolanmine (GPE), glycerophosphoglycerol (GPG), glycerophosphoinositol (GPI),
Probab=93.59 E-value=0.063 Score=58.65 Aligned_cols=41 Identities=29% Similarity=0.374 Sum_probs=37.7
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
.-+.|..+|..|+..||..||+|++=-.||+|||+|-.++.
T Consensus 13 ~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~ 53 (296)
T cd08559 13 APEHTLAAYALAIEMGADYIEQDLVMTKDGVLVARHDPTLD 53 (296)
T ss_pred CccchHHHHHHHHHhCCCEEEEeeEEccCCCEEEeccchhh
Confidence 44789999999999999999999999999999999998763
No 224
>cd08606 GDPD_YPL110cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL110cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL110cp and other uncharacterized fungal homologs. The product of S. cerevisiae ORF YPL110c (GDE1), YPL110cp (Gde1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL110cp has been characterized as a cytoplasmic glycerophosphocholine (GPC)-specific phosphodiesterase that selectively hydrolyzes GPC, not glycerophosphoinositol (GPI), to generate choline and glycerolphosphate. YPL110cp has multi-domain architecture, including not only C-terminal GDPD, but also an SPX N-terminal domain along with several ankyrin repeats, which imp
Probab=93.41 E-value=0.068 Score=58.09 Aligned_cols=39 Identities=23% Similarity=0.474 Sum_probs=37.2
Q ss_pred CCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 293 ESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 293 ~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
+.+..+|..|+..||..||+|++=-.||+|||+|-.|+.
T Consensus 24 ENTl~af~~A~~~g~d~vE~DV~lTkDg~~VV~HD~~l~ 62 (286)
T cd08606 24 ENTVESFILAASLGASYVEVDVQLTKDLVPVIYHDFLVS 62 (286)
T ss_pred cchHHHHHHHHHcCCCEEEEEEEEccCCEEEEeCCCeec
Confidence 789999999999999999999999999999999998875
No 225
>cd08571 GDPD_SHV3_plant Glycerophosphodiester phosphodiesterase domain of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase (GDPD) domain present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP-GDEs are not conserv
Probab=93.29 E-value=0.077 Score=58.10 Aligned_cols=41 Identities=24% Similarity=0.374 Sum_probs=37.7
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
.-+.|..+|..|+..|+..||+|++=-.||++||.|..++.
T Consensus 13 ~PENTl~Af~~A~~~Gad~IE~DV~lTkDg~lVv~HD~~l~ 53 (302)
T cd08571 13 YPDSTDLAYQKAISDGADVLDCDVQLTKDGVPICLPSINLD 53 (302)
T ss_pred CCcchHHHHHHHHHcCCCEEEeeeeEcCCCcEEEeCCchhc
Confidence 34779999999999999999999999999999999998873
No 226
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=93.28 E-value=0.19 Score=39.00 Aligned_cols=46 Identities=11% Similarity=0.192 Sum_probs=36.0
Q ss_pred cCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHH
Q psy8789 197 VTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFL 249 (851)
Q Consensus 197 lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL 249 (851)
|+..|+++||+... ..++++.|..++++.|.+.+ |.|..+||..|.
T Consensus 2 msf~Evk~lLk~~N--I~~~~~yA~~LFq~~D~s~~-----g~Le~~Ef~~Fy 47 (51)
T PF14788_consen 2 MSFKEVKKLLKMMN--IEMDDEYARQLFQECDKSQS-----GRLEGEEFEEFY 47 (51)
T ss_dssp BEHHHHHHHHHHTT------HHHHHHHHHHH-SSSS-----SEBEHHHHHHHH
T ss_pred CCHHHHHHHHHHHc--cCcCHHHHHHHHHHhcccCC-----CCccHHHHHHHH
Confidence 78899999999766 44688999999999988665 899999998885
No 227
>cd08570 GDPD_YPL206cp_fungi Glycerophosphodiester phosphodiesterase domain of Saccharomyces cerevisiae YPL206cp and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in Saccharomyces cerevisiae YPL206cp and uncharacterized hypothetical homologs existing in fungi. The product of S. cerevisiae ORF YPL206c (PGC1), YPL206cp (Pgc1p), displays homology to bacterial and mammalian glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46), which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. S. cerevisiae YPL206cp is an integral membrane protein with a single GDPD domain following by a short hydrophobic C-terminal tail that may function as a membrane anchor. This protein plays an essential role in the regulation of the cardiolipin (CL) biosynthetic pathway in yeast by removing the excess phosphatidylglycerol (PG) content of membranes via a phospholip
Probab=93.28 E-value=0.099 Score=55.02 Aligned_cols=41 Identities=24% Similarity=0.377 Sum_probs=37.8
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
.-+.|.++|.+|+..|++.||+|+.=-.||+|||.|-.++.
T Consensus 11 ~pENT~~af~~a~~~g~d~vE~Dv~lTkDg~~vv~HD~~l~ 51 (234)
T cd08570 11 YPENTLLAFEKAVEAGADAIETDVHLTKDGVVVISHDPNLK 51 (234)
T ss_pred CCccHHHHHHHHHHhCCCEEEEEeeEccCCcEEEeCCCccc
Confidence 45889999999999999999999999999999999998863
No 228
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=93.17 E-value=0.46 Score=41.98 Aligned_cols=64 Identities=17% Similarity=0.269 Sum_probs=50.3
Q ss_pred cCcccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHh
Q psy8789 24 CAIAKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLV 98 (851)
Q Consensus 24 ~~k~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~ 98 (851)
.......|+|.++ .|+.....+.- .......||.|.+... +++.|.|.|+++++.|+..|+..+
T Consensus 40 ~~~~~~~i~l~~~-~v~~~~~~~~~-------~~~~~~~~f~i~~~~~---~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 40 DSKPKGSIPLDDC-TVRPDPSSDFL-------SNKKRKNCFEITTPNG---KSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp ESSESEEEEGTTE-EEEEETSSTST-------STSSSSSEEEEEETTS---EEEEEEESSHHHHHHHHHHHHHHH
T ss_pred ceeeeEEEEecCc-eEEEcCccccc-------cccCCCcEEEEEeCCC---cEEEEEcCCHHHHHHHHHHHHHHh
Confidence 3456678999999 88887666431 1133579999999874 689999999999999999999765
No 229
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=93.17 E-value=0.2 Score=43.94 Aligned_cols=31 Identities=19% Similarity=0.320 Sum_probs=23.8
Q ss_pred CHHHHHHHHHHhccccccccCCCcccHHHHHHHHhC
Q psy8789 216 NEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFS 251 (851)
Q Consensus 216 s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S 251 (851)
++.++..++..++.+.+ |.|++++|+.+|..
T Consensus 49 ~~~ei~~i~~~~d~~~~-----g~I~f~eF~~~~~~ 79 (88)
T cd00213 49 DPEAVDKIMKDLDVNKD-----GKVDFQEFLVLIGK 79 (88)
T ss_pred CHHHHHHHHHHhccCCC-----CcCcHHHHHHHHHH
Confidence 34567777887876655 88999999998864
No 230
>cd08620 PI-PLCXDc_like_1 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=93.01 E-value=0.53 Score=50.74 Aligned_cols=135 Identities=15% Similarity=0.226 Sum_probs=80.9
Q ss_pred CCccccccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEee---ecC---CCCCceEeecCCceeeeehHHHHHH
Q psy8789 269 TKPLSHYFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDC---WDG---PDGTPIVYHGHTLTTKIKFKDVVKT 342 (851)
Q Consensus 269 ~~pl~~Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~---wdg---~~~~p~v~hg~t~t~~i~~~~v~~~ 342 (851)
+.||++..|--|||+.-.+---.+..=......=|..|+|.+.|=| ++. ..++.-+||.|-+-...+|.++++.
T Consensus 6 ~~~l~~l~iPGtHDSg~~~~~~~s~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~~~~~~~~~~~~~Hg~~~~~~l~~~L~~ 85 (281)
T cd08620 6 QQPFNRFVLPGAHDAGMNGMTNLSVTQKDNVSTQLALGARYFDFRPGYLWPQTRVLVLLNDLYHQHNMIPGQGFDTFLQD 85 (281)
T ss_pred CcchhheeecCCCcccccCCCchhhcCCccHHHHHhcCcEEEEEEeeeccCccccccccCcEEEEeeccCCCcHHHHHHH
Confidence 6899999999999987544211111112234567899999998865 211 0122224443334456799999999
Q ss_pred HhhcccccCCCceEEEecc-----CCCHHHHHHHHHHHHHHhhcccCCCcCC-CCCCCCCChhhhhc
Q psy8789 343 IRDHAFETSKYPVILSIED-----NCSLPQQRVMAQIMLDIFKDMLLIHPVE-KNETVLPSPHQLRG 403 (851)
Q Consensus 343 i~~~af~~s~yP~ils~e~-----hc~~~~q~~~a~~~~~~~g~~l~~~~~~-~~~~~lpsp~~l~~ 403 (851)
|+.+.=....=-|||++-+ ||-.+.+...-+.+.+.|++.-+..... .....-|+.++|..
T Consensus 86 i~~FL~~~p~EvVil~~~~~~~~~d~~~p~~~~l~~~l~~~f~~~~~~~~~~~~~~~~~~TL~~L~~ 152 (281)
T cd08620 86 VVTFLKANPTEIVVVHITWDGFDNDCARPSAQEVVEALAQALASAKVGYVTSGTVSDLAASYAQLRQ 152 (281)
T ss_pred HHHHHHHCCCcEEEEEEEcCCccccccChhHHHHHHHHHHHhhccCccccCCCccccccCcHHHHHh
Confidence 9987544445569999942 4533333566777888888754441111 11122356666644
No 231
>KOG3632|consensus
Probab=92.96 E-value=0.051 Score=65.02 Aligned_cols=58 Identities=24% Similarity=0.508 Sum_probs=49.2
Q ss_pred ceEEEEEEeecCCCCC-------CcccCCCCEEEEeEec-CCCeEEEEECCceEEEecCCCccccCC
Q psy8789 784 SITVKALYDYQARNDD-------ELSFPKHAIISNVTRA-EGGWWRGDYGGKRMHWFPSNYVAEIEP 842 (851)
Q Consensus 784 ~~~~~al~dy~~~~~~-------eLs~~~Gd~i~vl~~~-~~gWw~g~~~g~~~G~fP~nyv~~i~~ 842 (851)
.....|.|||.+++.. +|.|..||||+|..+. ++|.+.|+++|.+ |++|+|+++....
T Consensus 1244 p~~mvaa~dydpqeSSpg~dgeAelafraGdIitVfg~mdddgfyyGelngqk-glvpsnfle~p~~ 1309 (1335)
T KOG3632|consen 1244 PRQMVAASDYDPQESSPGLDGEAELAFRAGDIITVFGKMDDDGFYYGELNGQK-GLVPSNFLEAPNA 1309 (1335)
T ss_pred hhhhhhhhcCCcccCCCCcccceeeccccCCeEEeeccccCCcccccccCCcc-CccccccccCCCc
Confidence 3467899999986543 8999999999999766 5799999999998 9999999987644
No 232
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=92.87 E-value=0.28 Score=44.26 Aligned_cols=57 Identities=18% Similarity=0.316 Sum_probs=44.7
Q ss_pred ccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 27 AKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 27 ~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
..+.|||.+++.|+.....+. . ..-..||.|+..+ ++..|.|+|+++++.|+..|+.
T Consensus 43 ~~g~IdL~~~~sVk~~~~~~~------~---~~~~~~Fei~tp~----rt~~l~A~se~e~e~WI~~i~~ 99 (101)
T cd01264 43 DDCSIDLSKIRSVKAVAKKRR------D---RSLPKAFEIFTAD----KTYILKAKDEKNAEEWLQCLNI 99 (101)
T ss_pred CCceEEcccceEEeecccccc------c---cccCcEEEEEcCC----ceEEEEeCCHHHHHHHHHHHHh
Confidence 357999999999998754321 0 0125799998876 7999999999999999999874
No 233
>KOG0377|consensus
Probab=92.71 E-value=0.65 Score=51.41 Aligned_cols=129 Identities=7% Similarity=0.139 Sum_probs=84.1
Q ss_pred HHHHHHhHhcCCC-CeeeHHHHHHHHHh-cCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHh--------------h
Q psy8789 113 WLRKHFYSLEGPR-ETVNLKDIKTFLPR-VNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNR--------------I 176 (851)
Q Consensus 113 wlr~~F~~~D~d~-G~Is~~El~~ll~~-l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~--------------l 176 (851)
=|.+.|..+|.++ |+|++..-..++.. ++.+.+=..++... +..+.+|.+.|.+-...... |
T Consensus 465 dL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kl--a~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvetL 542 (631)
T KOG0377|consen 465 DLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKL--ANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVETL 542 (631)
T ss_pred HHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhc--cCCCcCcceehHhHHHHhhhhhHHHHHHhHHHHHH
Confidence 3667899999999 99999998888875 46666655555433 23344567776655443321 1
Q ss_pred hccccccccccc-cccCCCCccCHHHHHHHHHHhcC--cCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHH
Q psy8789 177 MFDEQMFTDSYS-HYSSDGQTVTASELTNFLIREQN--ETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDF 248 (851)
Q Consensus 177 ~~r~~~~~~~f~-~~~~~~~~lt~~ef~~FL~~~Q~--e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~f 248 (851)
-......+.+|. .++++.|.||.+||+...+-... ....+++++.++.+..|-+++ |.|++.||+.-
T Consensus 543 Yr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkD-----G~IDlNEfLeA 612 (631)
T KOG0377|consen 543 YRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKD-----GKIDLNEFLEA 612 (631)
T ss_pred HhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCC-----CcccHHHHHHH
Confidence 111111123343 67888889999999876543221 123466788888888887777 89999999874
No 234
>PF14658 EF-hand_9: EF-hand domain
Probab=92.64 E-value=0.36 Score=39.79 Aligned_cols=57 Identities=14% Similarity=0.234 Sum_probs=46.5
Q ss_pred cccCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHh
Q psy8789 189 HYSSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLF 250 (851)
Q Consensus 189 ~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~ 250 (851)
++.++.|.+...++..+|+..... ..++.+++++++.+|+++. .+.|++++|..-|.
T Consensus 7 fD~~~tG~V~v~~l~~~Lra~~~~-~p~e~~Lq~l~~elDP~g~----~~~v~~d~F~~iM~ 63 (66)
T PF14658_consen 7 FDTQKTGRVPVSDLITYLRAVTGR-SPEESELQDLINELDPEGR----DGSVNFDTFLAIMR 63 (66)
T ss_pred cCCcCCceEeHHHHHHHHHHHcCC-CCcHHHHHHHHHHhCCCCC----CceEeHHHHHHHHH
Confidence 566777889999999999988752 3467899999999998765 38899999987663
No 235
>cd08602 GDPD_ScGlpQ1_like Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of putative bacterial and eukaryotic glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) similar to Escherichia coli periplasmic phosphodiesterase GlpQ, as well as plant glycerophosphodiester phosphodiesterases (GP-PDEs), all of which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. The prototypes of this family include putative secreted phosphodiesterase encoded by gene glpQ1 (SCO1565) from the pho regulon in Streptomyces coelicolor genome, and in plants, two distinct Arabidopsis thaliana genes, AT5G08030 and AT1G74210, coding putative GP-PDEs from the cell walls and vacuoles, respectively.
Probab=92.60 E-value=0.11 Score=56.99 Aligned_cols=42 Identities=31% Similarity=0.422 Sum_probs=38.6
Q ss_pred cccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 290 FSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 290 ~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
+.-+.|..+|..|+..||..||+|++=-.||+|||.|..+|.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DVqlTkDg~lVv~HD~~l~ 53 (309)
T cd08602 12 YRPEHTLAAYQLAIEQGADFIEPDLVSTKDGVLICRHEPELS 53 (309)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEeeeECCCCcEEEeCCCccc
Confidence 455889999999999999999999999999999999998864
No 236
>cd08583 PI-PLCc_GDPD_SF_unchar1 Uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipaseand Glycerophosphodiester phosphodiesterases. This subfamily corresponds to a group of uncharacterized hypothetical proteins similar to the catalytic domains of Phosphoinositide-specific phospholipase C (PI-PLC), and glycerophosphodiester phosphodiesterases (GP-GDE), and also sphingomyelinases D (SMases D) and similar proteins. They hydrolyze the 3'-5' phosphodiester bonds in different substrates, utilizing a similar mechanism of general base and acid catalysis involving two conserved histidine residues.
Probab=92.59 E-value=0.13 Score=54.31 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=36.6
Q ss_pred cCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCc
Q psy8789 292 SESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTL 330 (851)
Q Consensus 292 ~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~ 330 (851)
-+-|..++..|++.|++-||+|+.=-.||++||+|-.|+
T Consensus 14 pENTl~Af~~A~~~G~d~iE~DV~lTkDg~lVv~HD~~~ 52 (237)
T cd08583 14 YTNSLDAFEHNYKKGYRVFEVDLSLTSDGVLVARHSWDE 52 (237)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeeEccCCCEEEEECCcC
Confidence 478999999999999999999999999999999998865
No 237
>KOG2999|consensus
Probab=92.56 E-value=0.025 Score=63.97 Aligned_cols=71 Identities=20% Similarity=0.306 Sum_probs=52.9
Q ss_pred CeEEceeehhhhcCCCccccccCccccc-CCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHhhh
Q psy8789 29 DEVDMREVKEVRVGKCFKDFDRWPEESG-RVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLVPD 100 (851)
Q Consensus 29 ~~i~i~~I~eIR~G~~s~~f~~~~~~~~-~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~~~ 100 (851)
..+.|.||++|-+|++..-.++.....+ +..-+..|+|.|.+. .-.+|++||+++.++.+|++||+.|+-.
T Consensus 590 ~klpvaDIkav~tgkdcphmkek~a~kQnk~~lelafsityD~~-e~~~Lnfiapdk~e~~iWtdGL~aLLG~ 661 (713)
T KOG2999|consen 590 EKLPVADIKAVVTGKDCPHMKEKSALKQNKEVLELAFSITYDMK-EGETLNFIAPDKTEYCIWTDGLNALLGS 661 (713)
T ss_pred hhcCHHHHHHHhcCCCCcchhhcchhhhhHHHHhhhhhhhccCC-CCceEeeecCCcceEEeehhhHHHHhCC
Confidence 3689999999999988654333211111 122468899999853 2379999999999999999999999853
No 238
>cd08604 GDPD_SHV3_repeat_2 Glycerophosphodiester phosphodiesterase domain repeat 2 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 2 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play important an role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=92.50 E-value=0.13 Score=56.37 Aligned_cols=42 Identities=19% Similarity=0.280 Sum_probs=38.6
Q ss_pred cccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 290 FSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 290 ~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
+.-+.|..+|..|+..||..||+|++=-.||+|||.|-.||.
T Consensus 12 ~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~ 53 (300)
T cd08604 12 DYPGCTDLAYQKAVKDGADVIDCSVQMSKDGVPFCLDSINLI 53 (300)
T ss_pred CCCcchHHHHHHHHHcCCCEEEEeeeEcCCCCEEEecccccc
Confidence 345889999999999999999999999999999999998873
No 239
>cd08610 GDPD_GDE6 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE6 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE6 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 4 (GDPD4)) and their metazoan homologs. Mammalian GDE6 is a transmembrane protein predominantly expressed in the spermatocytes of testis. Although the specific physiological function of mammalian GDE6 has not been elucidated, its different pattern of tissue distribution suggests it might play a critical role in the completion of meiosis during male germ cell differentiation.
Probab=92.45 E-value=0.13 Score=56.52 Aligned_cols=42 Identities=24% Similarity=0.461 Sum_probs=38.4
Q ss_pred cccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 290 FSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 290 ~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
..-+.|..+|..|+..||.-||+|++=-.||+|||+|-.|+.
T Consensus 34 ~aPENTl~AF~~A~~~Gad~IE~DV~lTkDG~lVV~HD~tL~ 75 (316)
T cd08610 34 LAPENTMMSFEKAIEHGAHGLETDVTLSYDGVPFLMHDFTLK 75 (316)
T ss_pred CCCccHHHHHHHHHHcCCCEEEEEEEEccCCCEEEeCCCccc
Confidence 344889999999999999999999999999999999998874
No 240
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=92.42 E-value=0.55 Score=40.77 Aligned_cols=59 Identities=24% Similarity=0.376 Sum_probs=44.9
Q ss_pred cccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHh
Q psy8789 26 IAKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLV 98 (851)
Q Consensus 26 k~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~ 98 (851)
.....|+|+++ .|..+..... .....+|+|..+.. +++.|.|+|+++++.|+..|+..+
T Consensus 43 ~~~~~i~l~~~-~v~~~~~~~~----------~~~~~~f~l~~~~~---~~~~f~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 43 KPKGSIDLSGI-TVREAPDPDS----------AKKPHCFEIKTADR---RSYLLQAESEEEREEWVDALRKAI 101 (102)
T ss_pred CCceEEECCcC-EEEeCCCCcc----------CCCceEEEEEecCC---ceEEEEcCCHHHHHHHHHHHHHhh
Confidence 44567888887 7766654332 12468999998874 689999999999999999998764
No 241
>cd08572 GDPD_GDE5_like Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian glycerophosphodiester phosphodiesterase GDE5-like proteins. GDE5 is widely expressed in mammalian tissues, with highest expression in spinal chord. Although its biological function remains unclear, mammalian GDE5 shows higher sequence homology to fungal and plant glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46) than to other bacterial and mammalian GP-GDEs. It may also hydrolyze glycerophosphodiesters to sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=92.30 E-value=0.14 Score=55.83 Aligned_cols=43 Identities=23% Similarity=0.504 Sum_probs=38.8
Q ss_pred cccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCcee
Q psy8789 290 FSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTT 332 (851)
Q Consensus 290 ~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~ 332 (851)
..-+.|..+|..|+..||.-||+||+=-.||+|||+|-.++..
T Consensus 19 ~~pENTl~Af~~A~~~Gad~vE~DV~lTkDG~lVv~HD~~l~r 61 (293)
T cd08572 19 GIRENTIASFLAAAKHGADMVEFDVQLTKDGVPVIYHDFTISV 61 (293)
T ss_pred CcCcccHHHHHHHHHcCCCEEEEEEEEccCCeEEEEcCCccee
Confidence 3557899999999999999999999999999999999988743
No 242
>KOG0038|consensus
Probab=92.10 E-value=0.29 Score=46.15 Aligned_cols=59 Identities=20% Similarity=0.307 Sum_probs=46.1
Q ss_pred HHhHhcCCC-CeeeHHHHHHHHHhcC-CCCCHHHHH----HHHhhhcCCCCCCcCHHHHHHHHHh
Q psy8789 117 HFYSLEGPR-ETVNLKDIKTFLPRVN-CKMSTNKLR----EHFQEVDTRKTNELAFDEFSILYNR 175 (851)
Q Consensus 117 ~F~~~D~d~-G~Is~~El~~ll~~l~-~~~s~~~l~----~~f~e~D~~~~g~L~f~EF~~~~~~ 175 (851)
+|.-+|-|+ +.|.-.++.+.+.+|- -..+.+++. +++.++|.|++|.|+|.||..++.+
T Consensus 113 AFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~~i~r 177 (189)
T KOG0038|consen 113 AFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEFEHVILR 177 (189)
T ss_pred eeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Confidence 677778777 8999999988888774 345655554 5778999999999999999987644
No 243
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=92.10 E-value=0.16 Score=33.09 Aligned_cols=27 Identities=30% Similarity=0.539 Sum_probs=20.6
Q ss_pred HHHHHhhhcCCCCCCcCHHHHHHHHHh
Q psy8789 149 LREHFQEVDTRKTNELAFDEFSILYNR 175 (851)
Q Consensus 149 l~~~f~e~D~~~~g~L~f~EF~~~~~~ 175 (851)
++.+|+.+|.+++|.|++++|..+++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 456778888888888888888877654
No 244
>cd08619 PI-PLCXDc_plant Catalytic domain of phosphatidylinositol-specific phospholipase C, X domain containing proteins found in plants. The CD corresponds to the catalytic domain present in uncharacterized plant phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, plant PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidylinositol (PI) to produce phosphorylated myo-inositol and diacylglycerol (DAG). Although the biological function of plant PI-PLCXDs still remains u
Probab=91.87 E-value=0.39 Score=51.35 Aligned_cols=128 Identities=16% Similarity=0.177 Sum_probs=82.9
Q ss_pred cCcCCccccccccccCCcccc---CCccc-c--CCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCceeeeehHHH
Q psy8789 266 QDMTKPLSHYFINSSHNTYLT---GDQFS-S--ESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTTKIKFKDV 339 (851)
Q Consensus 266 ~dm~~pl~~Y~i~sshntyl~---~~q~~-~--~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~~i~~~~v 339 (851)
.+-+.||++=.|--||||.-. +..+. + ..--.....=|..|+|.+.|-|=. .-.++||.. ...+|.+|
T Consensus 23 ~~~~l~L~~L~IPGTHDS~t~~~~~~~~~~~~s~tQ~~sI~~QL~~GiRyfDiRv~~----~~~~~HG~~--~~~~~~dv 96 (285)
T cd08619 23 MDSSLKLRDIVWPGTHDSATNKIGIPKVSRPFARCQSLSIYNQLCSGARVLDIRVQE----DRRVCHGCL--KTYPVDVV 96 (285)
T ss_pred CCCCcEeeheeeCCCccccccCCCCCccccccccccCCcHHHHHhCCceEEEEEecC----CeEEECCCc--CCCcHHHH
Confidence 455789999999999998743 11111 1 111123556689999999999853 257999963 24689999
Q ss_pred HHHHhhcccccCCCceEEEeccCCCHHHHHHHHHHHHHHhhcccCCCcCCCCCCCCCChhhhh
Q psy8789 340 VKTIRDHAFETSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDMLLIHPVEKNETVLPSPHQLR 402 (851)
Q Consensus 340 ~~~i~~~af~~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~ 402 (851)
++.|+++-=....=-|||++......+-.....+.+.+.||+.|+.. +..... =+.++|.
T Consensus 97 L~~i~~FL~~hp~EvVIL~~k~ey~~~~~~~~~~~li~~lGd~l~~~--~~~~~~-~TL~eL~ 156 (285)
T cd08619 97 LNDIKRFLSETKSEFVILEIRTEYGHEDPPQFDLWLVEQLGDHLIHQ--DDSVFS-KTLAELL 156 (285)
T ss_pred HHHHHHHHHHCCCeEEEEEEeecccCCCchHHHHHHHHHhcchhccC--CCcccc-ccHHHHh
Confidence 99999864333233499999655432222234478889999999853 211111 2667776
No 245
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=91.87 E-value=0.2 Score=46.40 Aligned_cols=53 Identities=17% Similarity=0.353 Sum_probs=38.1
Q ss_pred HHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHH
Q psy8789 117 HFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSI 171 (851)
Q Consensus 117 ~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~ 171 (851)
.|..+|.|+ |.|+.+|++.+...| ...+.-++..|+.+|.|++|.|+++|+..
T Consensus 59 ~F~~LD~n~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 59 KFCQLDRNKDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHH--T-SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hHhhhcCCCCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 688999999 999999998886655 34445677889999999999999999853
No 246
>cd08578 GDPD_NUC-2_fungi Putative glycerophosphodiester phosphodiesterase domain of ankyrin repeat protein NUC-2 and similar proteins. This subfamily corresponds to a putative glycerophosphodiester phosphodiesterase domain (GDPD) present in Neurospora crassa ankyrin repeat protein NUC-2 and its Saccharomyces cerevisiae counterpart, Phosphate system positive regulatory protein PHO81. Some uncharecaterized NUC-2 sequence homologs are also included in this family. NUC-2 plays an important role in the phosphate-regulated signal transduction pathway in Neurospora crassa. It shows high similarity to a cyclin-dependent kinase inhibitory protein PHO81, which is part of the phosphate regulatory cascade in S. cerevisiae. Both NUC-2 and PHO81 have multi-domain architecture, including an SPX N-terminal domain following by several ankyrin repeats and a putative C-terminal GDPD domain with unknown function. Although the putative GDPD domain displays sequence homology to that of bacterial glycerophos
Probab=91.04 E-value=0.25 Score=53.81 Aligned_cols=52 Identities=15% Similarity=0.213 Sum_probs=41.5
Q ss_pred ccccccCCccccCCccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCcee
Q psy8789 275 YFINSSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLTT 332 (851)
Q Consensus 275 Y~i~sshntyl~~~q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t~ 332 (851)
||-|+|-.. ..+. ++...++.|...|++.||+|++=-.||.|||||-+++..
T Consensus 3 YWKst~~~~---~~~~---~~~~sfvtAsslgad~VE~DVqLTkDgvpVV~HD~~i~~ 54 (300)
T cd08578 3 YWKSTSGSD---TQAN---KDGNSFVTASSLSGEYLRVKVCVLKDGTPVVAPEWFVPV 54 (300)
T ss_pred ccccCCCcc---cccC---CCchhHHHHHHcCCCEEEEEEEECcCCEEEEECCCceEe
Confidence 777776522 1111 567899999999999999999999999999999998743
No 247
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=90.95 E-value=0.67 Score=42.45 Aligned_cols=62 Identities=19% Similarity=0.140 Sum_probs=43.9
Q ss_pred cCcccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHH
Q psy8789 24 CAIAKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYL 97 (851)
Q Consensus 24 ~~k~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L 97 (851)
..+..+.|+|..+..|..|..... . ...-...|.|.... +++.|+|+|+++.+.|+..|..+
T Consensus 46 ~~k~~g~I~L~~~~~v~~~~~~~~------~--~~~~~~~f~i~t~~----r~y~l~A~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 46 KFKLEFVIDLESCSQVDPGLLCTA------G--NCIFGYGFDIETIV----RDLYLVAKNEEEMTLWVNCICKL 107 (108)
T ss_pred CCccceEEECCccEEEcccccccc------c--CcccceEEEEEeCC----ccEEEEECCHHHHHHHHHHHHhh
Confidence 467789999999888766532210 0 01113567777543 68999999999999999999765
No 248
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=90.83 E-value=0.73 Score=41.29 Aligned_cols=63 Identities=17% Similarity=0.183 Sum_probs=41.8
Q ss_pred CcccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHH
Q psy8789 25 AIAKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYL 97 (851)
Q Consensus 25 ~k~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L 97 (851)
++..+.|+|+.+..|........ .+.......+|.|.... ++..|.|+|+++++.|+..|+.+
T Consensus 38 ~~~~g~I~L~~~~~v~~~~~~~~------~~~~~~~~~~f~i~t~~----r~~~~~a~s~~e~~~Wi~ai~~~ 100 (101)
T cd01235 38 TAEKGCIDLAEVKSVNLAQPGMG------APKHTSRKGFFDLKTSK----RTYNFLAENINEAQRWKEKIQQC 100 (101)
T ss_pred CccceEEEcceeEEEeecCCCCC------CCCCCCCceEEEEEeCC----ceEEEECCCHHHHHHHHHHHHhh
Confidence 45568999999887765322110 00112234567664433 68899999999999999999875
No 249
>cd08585 GDPD_like_3 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial glycerophosphodiester phosphodiesterases. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized bacterial glycerophosphodiester phosphodiesterase and similar proteins. They show high sequence similarity with Escherichia coli glycerophosphodiester phosphodiesterase, which catalyzes the degradation of glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=90.49 E-value=0.23 Score=52.41 Aligned_cols=39 Identities=33% Similarity=0.473 Sum_probs=35.6
Q ss_pred cCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 292 SESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 292 ~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
-+-|..+|..|+..|+ -||+|++=-.||+|||+|-.|+.
T Consensus 20 pENTl~af~~A~~~G~-~iE~DV~lT~Dg~lVv~HD~~l~ 58 (237)
T cd08585 20 PENSLSAFRAAAEAGY-GIELDVQLTADGEVVVFHDDNLK 58 (237)
T ss_pred CccHHHHHHHHHHcCC-cEEEEeeECCCCCEEEeccchHh
Confidence 4678999999999999 89999999999999999998763
No 250
>cd08608 GDPD_GDE2 Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE2 and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in mammalian GDE2 (also known as glycerophosphodiester phosphodiesterase domain-containing protein 5 (GDPD5)) and their metazoan homologs. Mammalian GDE2 is transmembrane protein primarily expressed in mature neurons. It is a mammalian homolog of bacterial glycerophosphodiester phosphodiesterases (GP-GDEs, EC 3.1.4.46), which catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Mammalian GDE2 selectively hydrolyzes glycerophosphocholine (GPC) and has been characterized as GPC-GDE (EC 3.1.4.2) that contributes to osmotic regulation of cellular GPC. Mammalian GDE2 functions in a complex with an antioxidant scavenger peroxiredoxin1 (Prdx1) to control motor neuron differenti
Probab=90.36 E-value=0.28 Score=54.70 Aligned_cols=41 Identities=24% Similarity=0.387 Sum_probs=37.7
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
.-+-+..+|..|+..||..||+|++=-.||+|||+|-.|+.
T Consensus 14 aPENTL~AF~~A~~~GaD~IElDV~lTkDGvlVV~HD~tL~ 54 (351)
T cd08608 14 APENTLMSFQKALEQKVYGLQADVTISLDGVPFLMHDRTLR 54 (351)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCccc
Confidence 34778999999999999999999999999999999998874
No 251
>cd08613 GDPD_GDE4_like_1 Glycerophosphodiester phosphodiesterase domain of uncharacterized bacterial homologs of mammalian glycerophosphodiester phosphodiesterase GDE4. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in uncharacterized bacterial homologs of mammalian GDE4, a transmembrane protein whose cellular function has not been elucidated yet.
Probab=90.27 E-value=0.26 Score=53.58 Aligned_cols=39 Identities=28% Similarity=0.442 Sum_probs=36.5
Q ss_pred CCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 293 ESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 293 ~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
+-|.++|..|+..||..||+|++--.||.+||+|-.||.
T Consensus 60 ENTl~Af~~A~~~Gad~IE~DV~lTkDg~lVV~HD~tL~ 98 (309)
T cd08613 60 ENTIASMQAAFDAGADVVELDVHPTKDGEFAVFHDWTLD 98 (309)
T ss_pred chHHHHHHHHHHcCCCEEEEEEEEccCCeEEEEecCccc
Confidence 668999999999999999999999999999999999873
No 252
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=89.85 E-value=1.2 Score=38.12 Aligned_cols=54 Identities=20% Similarity=0.291 Sum_probs=40.1
Q ss_pred ccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 27 AKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 27 ~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
....|+|.+ ..|+.+.... ....+|+|..... +.+.|.|.|+++++.|+..|+.
T Consensus 42 ~~~~i~l~~-~~v~~~~~~~------------~~~~~f~i~~~~~---~~~~~~~~s~~~~~~W~~~l~~ 95 (96)
T cd00821 42 PKGSIPLSG-AEVEESPDDS------------GRKNCFEIRTPDG---RSYLLQAESEEEREEWIEALQS 95 (96)
T ss_pred CcceEEcCC-CEEEECCCcC------------CCCcEEEEecCCC---cEEEEEeCCHHHHHHHHHHHhc
Confidence 445677766 5555553332 1468999998764 6899999999999999999974
No 253
>KOG0751|consensus
Probab=89.59 E-value=0.66 Score=52.07 Aligned_cols=118 Identities=14% Similarity=0.327 Sum_probs=72.9
Q ss_pred hcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcccccc-c--cccc---cccCC
Q psy8789 121 LEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQMF-T--DSYS---HYSSD 193 (851)
Q Consensus 121 ~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~-~--~~f~---~~~~~ 193 (851)
.|.-+ |-|+++|...+ ..+-+.. +......|+-+|..++|.++|++|...+.....-.... . -.|. +.+..
T Consensus 83 aD~tKDglisf~eF~af-e~~lC~p-Dal~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~~ 160 (694)
T KOG0751|consen 83 ADQTKDGLISFQEFRAF-ESVLCAP-DALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDIR 160 (694)
T ss_pred hhhcccccccHHHHHHH-HhhccCc-hHHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhHH
Confidence 35455 88899887754 3332222 33445678888888888999999988887643221110 0 1111 22233
Q ss_pred CCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhC
Q psy8789 194 GQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFS 251 (851)
Q Consensus 194 ~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S 251 (851)
...++..+|.+||.+.|.| .+++-|++.+..+. |.||.-.|...|..
T Consensus 161 ~r~~ny~~f~Q~lh~~~~E------~~~qafr~~d~~~n-----g~is~Ldfq~imvt 207 (694)
T KOG0751|consen 161 KRHLNYAEFTQFLHEFQLE------HAEQAFREKDKAKN-----GFISVLDFQDIMVT 207 (694)
T ss_pred HHhccHHHHHHHHHHHHHH------HHHHHHHHhcccCC-----CeeeeechHhhhhh
Confidence 3458888999999888733 35556677665544 78888888766653
No 254
>KOG0751|consensus
Probab=89.30 E-value=1.1 Score=50.30 Aligned_cols=93 Identities=10% Similarity=0.320 Sum_probs=52.6
Q ss_pred HHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCC------CCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcccccccc
Q psy8789 113 WLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCK------MSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQMFTD 185 (851)
Q Consensus 113 wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~------~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~~~ 185 (851)
-...+|..+|+.+ |.++++++...+.+.++. .+.+-++..|... +.-.++|.||..++....... .+.
T Consensus 109 l~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~---~~r~~ny~~f~Q~lh~~~~E~--~~q 183 (694)
T KOG0751|consen 109 LFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDI---RKRHLNYAEFTQFLHEFQLEH--AEQ 183 (694)
T ss_pred HHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhH---HHHhccHHHHHHHHHHHHHHH--HHH
Confidence 3455677777766 777777777777665432 2344444555431 234567777777776654432 122
Q ss_pred ccc-cccCCCCccCHHHHHHHHHHhc
Q psy8789 186 SYS-HYSSDGQTVTASELTNFLIREQ 210 (851)
Q Consensus 186 ~f~-~~~~~~~~lt~~ef~~FL~~~Q 210 (851)
.|. .+..+.+.||.-+|+.-+.+.-
T Consensus 184 afr~~d~~~ng~is~Ldfq~imvt~~ 209 (694)
T KOG0751|consen 184 AFREKDKAKNGFISVLDFQDIMVTIR 209 (694)
T ss_pred HHHHhcccCCCeeeeechHhhhhhhh
Confidence 333 3444555677777777665543
No 255
>COG0584 UgpQ Glycerophosphoryl diester phosphodiesterase [Energy production and conversion]
Probab=89.00 E-value=0.38 Score=51.26 Aligned_cols=38 Identities=34% Similarity=0.428 Sum_probs=35.6
Q ss_pred cCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCC
Q psy8789 292 SESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHT 329 (851)
Q Consensus 292 ~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t 329 (851)
-+-|.++|..|+..|+.+||+|+.=-.||.+||+|-+|
T Consensus 19 PENTl~Af~~A~~~gad~iE~Dv~lTkDg~lVv~HD~~ 56 (257)
T COG0584 19 PENTLAAFELAAEQGADYIELDVQLTKDGVLVVIHDET 56 (257)
T ss_pred CcchHHHHHHHHHcCCCEEEeeccCccCCcEEEecccc
Confidence 37789999999999999999999999999999999884
No 256
>KOG3565|consensus
Probab=88.98 E-value=0.12 Score=61.61 Aligned_cols=58 Identities=26% Similarity=0.558 Sum_probs=50.1
Q ss_pred CceEEEEEEeecCCCCCCcccCCCCEEEEeEec-CCCeEEEE--ECCceEEEecCCCccccC
Q psy8789 783 ASITVKALYDYQARNDDELSFPKHAIISNVTRA-EGGWWRGD--YGGKRMHWFPSNYVAEIE 841 (851)
Q Consensus 783 ~~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~-~~gWw~g~--~~g~~~G~fP~nyv~~i~ 841 (851)
....+.|+|.|.+++++++++.+|+++.+++.+ ++||=+++ .++.. |.||.+|++...
T Consensus 577 ~~~~~~a~~~~~~~s~~~~si~~~~il~~ie~~~g~gwt~~r~~~~~~~-g~~Ptsyl~~~~ 637 (640)
T KOG3565|consen 577 PIRTSKALYAFEGQSEGTISIDPGEILQVIEEDKGDGWTRGRLEPNGEK-GYVPTSYLDVTE 637 (640)
T ss_pred CccceecccCcCCCCCCccccCcchhHHHHhhcccCCCCCCCCCCCCcC-CCCCcccccccc
Confidence 346799999999999999999999999999877 67999998 55665 999999998653
No 257
>KOG2258|consensus
Probab=88.71 E-value=0.53 Score=52.40 Aligned_cols=39 Identities=33% Similarity=0.571 Sum_probs=36.0
Q ss_pred CCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce
Q psy8789 293 ESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 293 ~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t 331 (851)
+-|..+|.+|...|+.|||+|+-..+||.||+.|--|..
T Consensus 83 enT~~A~~~a~~~Gad~ie~dV~~TsDg~~v~l~d~~~~ 121 (341)
T KOG2258|consen 83 ENTLAAYKKAIADGADLIELDVQMTSDGVPVILHDSTTV 121 (341)
T ss_pred cccHHHHHHHHHcCCcEEEeccccCCCCceEEeecCcce
Confidence 568999999999999999999999999999999987655
No 258
>cd08560 GDPD_EcGlpQ_like_1 Glycerophosphodiester phosphodiesterase domain similar to Escherichia coli periplasmic phosphodiesterase (GlpQ) include uncharacterized proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) present in a group of uncharacterized glycerophosphodiester phosphodiesterases (GP-GDE, EC 3.1.4.46) and their hypothetical homologs. Members in this subfamily show high sequence similarity to Escherichia coli periplasmic phosphodiesterase GlpQ, which catalyzes the Ca2+-dependent degradation of periplasmic glycerophosphodiesters to produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols.
Probab=88.53 E-value=0.44 Score=53.24 Aligned_cols=40 Identities=25% Similarity=0.272 Sum_probs=36.5
Q ss_pred ccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecC-Cc
Q psy8789 291 SSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGH-TL 330 (851)
Q Consensus 291 ~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~-t~ 330 (851)
.-+-|.++|..|+..|+.-||+|++=-.||.|||.|-. +|
T Consensus 29 ~PEnTl~Af~~Ai~~Gad~IE~DV~lTkDg~lVV~HD~~~L 69 (356)
T cd08560 29 FPEHTRESYEAAARMGAGILECDVTFTKDRELVCRHSQCDL 69 (356)
T ss_pred CCcchHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCccc
Confidence 34779999999999999999999999999999999996 44
No 259
>KOG2562|consensus
Probab=87.06 E-value=3.2 Score=46.74 Aligned_cols=118 Identities=17% Similarity=0.334 Sum_probs=74.8
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCC-CCCcCHHHHHHHHHhhhcccccccccccccc
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRK-TNELAFDEFSILYNRIMFDEQMFTDSYSHYS 191 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~-~g~L~f~EF~~~~~~l~~r~~~~~~~f~~~~ 191 (851)
+++.|..++..+ |+|+++|+.+-.- -..+..+-.+-|.++ ...++++.|...|.... ..|+
T Consensus 227 i~rIFy~~nrs~tG~iti~el~~snl-------l~~l~~l~eEed~nq~~~~FS~e~f~viy~kFw----------eLD~ 289 (493)
T KOG2562|consen 227 IQRIFYYLNRSRTGRITIQELLRSNL-------LDALLELDEEEDINQVTRYFSYEHFYVIYCKFW----------ELDT 289 (493)
T ss_pred hhhhheeeCCccCCceeHHHHHHhHH-------HHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHh----------hhcc
Confidence 566788889888 9999999965311 123334444445544 23677888877765421 2456
Q ss_pred CCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhCcCc
Q psy8789 192 SDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFSKQN 254 (851)
Q Consensus 192 ~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S~~n 254 (851)
+.++.|+.++|.+|-. ..++.--++.++..+-.... ...+|.|++++|+.|+++.++
T Consensus 290 Dhd~lidk~~L~ry~d-----~tlt~~ivdRIFs~v~r~~~-~~~eGrmdykdFv~FilA~e~ 346 (493)
T KOG2562|consen 290 DHDGLIDKEDLKRYGD-----HTLTERIVDRIFSQVPRGFT-VKVEGRMDYKDFVDFILAEED 346 (493)
T ss_pred ccccccCHHHHHHHhc-----cchhhHHHHHHHhhccccce-eeecCcccHHHHHHHHHHhcc
Confidence 6678899999999853 22444445566652222211 123588999999999997653
No 260
>KOG0040|consensus
Probab=86.51 E-value=1.7 Score=54.79 Aligned_cols=86 Identities=15% Similarity=0.279 Sum_probs=49.4
Q ss_pred CCCHHHHH---HHHhhhcCCCCCCcCHHHHHHHHHhhhccc-cc----cccccc-----cccCCCCccCHHHHHHHHHHh
Q psy8789 143 KMSTNKLR---EHFQEVDTRKTNELAFDEFSILYNRIMFDE-QM----FTDSYS-----HYSSDGQTVTASELTNFLIRE 209 (851)
Q Consensus 143 ~~s~~~l~---~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~-~~----~~~~f~-----~~~~~~~~lt~~ef~~FL~~~ 209 (851)
.++++.|+ -+|+-+|.+++|.|++.+|..-.+.+-+.- -. .+..|. .+.+..|+++.++...||...
T Consensus 2246 GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ 2325 (2399)
T KOG0040|consen 2246 GVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISK 2325 (2399)
T ss_pred CCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhc
Confidence 46666555 467888888888888888877666553321 00 001121 344445667777777777654
Q ss_pred cCcCcCCHHHHHHHHHHhc
Q psy8789 210 QNETNVNEREVSRHMRDYL 228 (851)
Q Consensus 210 Q~e~~~s~~~~~~li~~~d 228 (851)
--+...+.++++.-++..+
T Consensus 2326 ETeNI~s~~eIE~AfraL~ 2344 (2399)
T KOG0040|consen 2326 ETENILSSEEIEDAFRALD 2344 (2399)
T ss_pred ccccccchHHHHHHHHHhh
Confidence 4444444455555555444
No 261
>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.
Probab=85.50 E-value=1.2 Score=35.10 Aligned_cols=36 Identities=28% Similarity=0.756 Sum_probs=27.9
Q ss_pred ccCCCCEEEEeEecCCC-eEEEE-ECCceEEEecCCCcc
Q psy8789 802 SFPKHAIISNVTRAEGG-WWRGD-YGGKRMHWFPSNYVA 838 (851)
Q Consensus 802 s~~~Gd~i~vl~~~~~g-Ww~g~-~~g~~~G~fP~nyv~ 838 (851)
.+..|+.|.++.....+ |++-+ ..+. .||+++.||+
T Consensus 18 ~l~~g~~v~v~~~~~~~~W~~V~~~~g~-~GwV~~~~l~ 55 (55)
T PF08239_consen 18 QLPKGEKVTVLGESGDGNWYKVRTYDGK-TGWVSSSYLS 55 (55)
T ss_dssp EEETTSEEEEEEEETT--EEEEEEETTE-EEEEEGGCEE
T ss_pred EEeCCCEEEEEEEcCCcEEEEEECcCCc-EEEEEccccC
Confidence 45689999999888655 99994 5555 5999999974
No 262
>KOG0041|consensus
Probab=84.80 E-value=1.8 Score=43.26 Aligned_cols=51 Identities=12% Similarity=0.160 Sum_probs=31.2
Q ss_pred cCCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHH
Q psy8789 191 SSDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDF 248 (851)
Q Consensus 191 ~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~f 248 (851)
.+.+++|+..||+.+|.+.+. .-|---.+.+|.+++.|.+ |.|||-+|+..
T Consensus 110 e~rDgfIdl~ELK~mmEKLga--pQTHL~lK~mikeVded~d-----gklSfreflLI 160 (244)
T KOG0041|consen 110 EDRDGFIDLMELKRMMEKLGA--PQTHLGLKNMIKEVDEDFD-----GKLSFREFLLI 160 (244)
T ss_pred ccccccccHHHHHHHHHHhCC--chhhHHHHHHHHHhhcccc-----cchhHHHHHHH
Confidence 344566777777777766542 2233456667777765555 66777777543
No 263
>KOG1955|consensus
Probab=84.59 E-value=1.9 Score=48.48 Aligned_cols=70 Identities=14% Similarity=0.320 Sum_probs=57.8
Q ss_pred hhhHHHHHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcc
Q psy8789 107 PLNVERWLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFD 179 (851)
Q Consensus 107 ~~~~~~wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r 179 (851)
+.+++ |+-++|..+-.|- |.|+=.-.++++.+-. ++-.+|..+++-.|.|++|.|+.+||+..|..+..|
T Consensus 227 ~EQRe-YYvnQFrtvQpDp~gfisGsaAknFFtKSk--lpi~ELshIWeLsD~d~DGALtL~EFcAAfHLVVaR 297 (737)
T KOG1955|consen 227 PEQRE-YYVNQFRTVQPDPHGFISGSAAKNFFTKSK--LPIEELSHIWELSDVDRDGALTLSEFCAAFHLVVAR 297 (737)
T ss_pred HHHHH-HHHhhhhcccCCcccccccHHHHhhhhhcc--CchHHHHHHHhhcccCccccccHHHHHhhHhheeec
Confidence 34433 6677999887776 9999999999998754 455678899999999999999999999999887655
No 264
>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.
Probab=84.03 E-value=1.9 Score=37.39 Aligned_cols=46 Identities=4% Similarity=0.053 Sum_probs=29.8
Q ss_pred CCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCccccCC
Q psy8789 797 NDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEIEP 842 (851)
Q Consensus 797 ~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i~~ 842 (851)
+.-+|++++|+++.|++..+.+=|.++...+.-|++|.+++-+.+.
T Consensus 29 G~kDLpi~~GE~LeVI~~t~~~kvlCRN~~GKYGYV~~~~L~~~d~ 74 (89)
T PF14603_consen 29 GGKDLPIKPGEILEVIQFTDDNKVLCRNSEGKYGYVLRSHLLPLDG 74 (89)
T ss_dssp -TTB----TT-B-EEEEESSSSEEEEEETTTEEEEEEGGGS-----
T ss_pred CcccCCcCCCCEEEEEEeCCCCeEEEeCCCCceeEEEHHHccCCCC
Confidence 4568999999999999999999999998765559999998855443
No 265
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=83.71 E-value=1.6 Score=27.96 Aligned_cols=26 Identities=12% Similarity=0.378 Sum_probs=22.1
Q ss_pred HHHHhHhcCCC-CeeeHHHHHHHHHhc
Q psy8789 115 RKHFYSLEGPR-ETVNLKDIKTFLPRV 140 (851)
Q Consensus 115 r~~F~~~D~d~-G~Is~~El~~ll~~l 140 (851)
+++|..+|.++ |.|++.++..+++.+
T Consensus 3 ~~~f~~~d~~~~g~i~~~e~~~~~~~~ 29 (29)
T smart00054 3 KEAFRLFDKDGDGKIDFEEFKDLLKAL 29 (29)
T ss_pred HHHHHHHCCCCCCcEeHHHHHHHHHhC
Confidence 56788899988 999999999988753
No 266
>KOG4666|consensus
Probab=83.49 E-value=3.9 Score=43.97 Aligned_cols=99 Identities=11% Similarity=0.109 Sum_probs=71.1
Q ss_pred HHHHHHHhHhcCCC-CeeeHHHHHHHHHhc-CCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhccccccc-cccc
Q psy8789 112 RWLRKHFYSLEGPR-ETVNLKDIKTFLPRV-NCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQMFT-DSYS 188 (851)
Q Consensus 112 ~wlr~~F~~~D~d~-G~Is~~El~~ll~~l-~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~~-~~f~ 188 (851)
.-++..|..+|.+. |.+++.|-...+.-| |...+..-++--|+.++.+.+|.+.-.+|..+++....-++... ..|.
T Consensus 259 d~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lgv~~l~v~~lf~ 338 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVLGVEVLRVPVLFP 338 (412)
T ss_pred hhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhcCcceeeccccch
Confidence 45778899999988 999999987776644 56667777777888889989999888777766654332222211 2233
Q ss_pred -cccCCCCccCHHHHHHHHHHhc
Q psy8789 189 -HYSSDGQTVTASELTNFLIREQ 210 (851)
Q Consensus 189 -~~~~~~~~lt~~ef~~FL~~~Q 210 (851)
....+++.|+.++|++|...+.
T Consensus 339 ~i~q~d~~ki~~~~f~~fa~~~p 361 (412)
T KOG4666|consen 339 SIEQKDDPKIYASNFRKFAATEP 361 (412)
T ss_pred hhhcccCcceeHHHHHHHHHhCc
Confidence 4455667899999999997654
No 267
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=82.45 E-value=2.2 Score=38.40 Aligned_cols=34 Identities=26% Similarity=0.302 Sum_probs=29.1
Q ss_pred CcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHh
Q psy8789 61 ARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLV 98 (851)
Q Consensus 61 ~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~ 98 (851)
..||.|+-.+ +++.|.|.|+++++.|+..|+..+
T Consensus 65 ~~~F~I~t~~----rt~~~~A~s~~e~~~Wi~ai~~~~ 98 (100)
T cd01233 65 PNTFAVCTKH----RGYLFQALSDKEMIDWLYALNPLY 98 (100)
T ss_pred CcEEEEECCC----CEEEEEcCCHHHHHHHHHHhhhhh
Confidence 4699996554 689999999999999999998765
No 268
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=82.42 E-value=2.5 Score=47.79 Aligned_cols=57 Identities=14% Similarity=0.057 Sum_probs=44.0
Q ss_pred CCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhccccccccccc-cccCCCCccCHHHHHHHHHH
Q psy8789 141 NCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQMFTDSYS-HYSSDGQTVTASELTNFLIR 208 (851)
Q Consensus 141 ~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~~~~f~-~~~~~~~~lt~~ef~~FL~~ 208 (851)
+...-+.++..+|+.+|.+++|.|+++||... ...|. .+.+++|.|+.+||..++..
T Consensus 328 ~~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~~-----------~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 328 GGEAFTHAAQEIFRLYDLDGDGFITREEWLGS-----------DAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred ccChhhHHHHHHHHHhCCCCCCcCcHHHHHHH-----------HHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 44455678889999999999999999999531 12233 55667788999999999874
No 269
>KOG1856|consensus
Probab=82.40 E-value=2.2 Score=52.80 Aligned_cols=75 Identities=27% Similarity=0.493 Sum_probs=58.5
Q ss_pred CCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCC-eeeEEEEEE--------cCcEEEeCCcccCCHHHHHH
Q psy8789 664 HPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAED-KIKHCRIRV--------EGRLYTIGTTQFESLVELIS 734 (851)
Q Consensus 664 hg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~-~v~H~~I~~--------~~~~~~~~~~~F~sl~eLV~ 734 (851)
+-+++=++|+..|+... .|.++||+|+......+++++..+ .-.|+.|.- -|+.+.+++..|+.|.|+|.
T Consensus 1111 F~n~n~eQAe~yL~~~d-~ge~iiRpSSrgddhLvvtwKVsD~iYqhidV~E~eKEn~fslg~~l~i~~e~feDLDEiI~ 1189 (1299)
T KOG1856|consen 1111 FKNLNAEQAEAYLSDMD-QGELIIRPSSRGDDHLVVTWKVSDGIYQHIDVQELEKENYFSLGKTLWIGGEEFEDLDEIIA 1189 (1299)
T ss_pred ccCCCHHHHHHHHHhcc-cccEEeccccCCCCceEEEEEecCchhhhhhhhhhhccccccccceEEECCcccccHHHHHH
Confidence 34788999999999887 999999999887777888887654 455666665 14455566679999999999
Q ss_pred HhhhC
Q psy8789 735 YYERH 739 (851)
Q Consensus 735 ~y~~~ 739 (851)
-|-++
T Consensus 1190 r~vqp 1194 (1299)
T KOG1856|consen 1190 RYVQP 1194 (1299)
T ss_pred HHHHH
Confidence 98664
No 270
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=81.82 E-value=3.5 Score=37.33 Aligned_cols=55 Identities=13% Similarity=0.123 Sum_probs=40.5
Q ss_pred CcccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 25 AIAKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 25 ~k~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
+++.+.|+|+++..|..-..+ .-..+|+|+..+ .+..|+|+|++|.+.|+..|..
T Consensus 46 ~~p~~vI~L~~c~~v~~~~d~-------------k~~~~f~i~t~d----r~f~l~aese~E~~~Wi~~i~~ 100 (101)
T cd01257 46 SAPKRVIPLESCFNINKRADA-------------KHRHLIALYTRD----EYFAVAAENEAEQDSWYQALLE 100 (101)
T ss_pred CCceEEEEccceEEEeecccc-------------ccCeEEEEEeCC----ceEEEEeCCHHHHHHHHHHHhh
Confidence 567789999999887421111 123688886644 5888999999999999998864
No 271
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=81.76 E-value=2.9 Score=36.06 Aligned_cols=42 Identities=12% Similarity=0.328 Sum_probs=22.4
Q ss_pred HHHHhHhcCCCCeeeHHHHHHHHHhcCC--CCCHHHHHHHHhhh
Q psy8789 115 RKHFYSLEGPRETVNLKDIKTFLPRVNC--KMSTNKLREHFQEV 156 (851)
Q Consensus 115 r~~F~~~D~d~G~Is~~El~~ll~~l~~--~~s~~~l~~~f~e~ 156 (851)
+.+|..+-.+++.|+.+++.++|+.-.- ..+.+++.+++...
T Consensus 3 ~~if~~ys~~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~ 46 (83)
T PF09279_consen 3 EEIFRKYSSDKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKF 46 (83)
T ss_dssp HHHHHHHCTTSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHH
Confidence 3455555443366777777777654321 23455555555543
No 272
>PF05386 TEP1_N: TEP1 N-terminal domain; InterPro: IPR008850 Telomerase protein component 1 (TP1/TLP1) or TEP1 is a protein component of two ribonucleoprotein (RNP) complexes: vaults and telomerase. Vaults are large RNP particles with a barrel-like structure (IPR002499 from INTERPRO). The telomerase RNP replenishes incomplete chromosome termini due to DNA replication. Mammalian TEP1 is an RNA-binding protein and is required for the association of vault RNA with the vault particle [, ]. The N-terminal part of TEP1 contains 4 copies of the TEP1 N-terminal repeat in tandem. The repeat is composed of 30 amino acids and occurs in combination with the TROVE (IPR008858 from INTERPRO) and NACHT (IPR007111 from INTERPRO) domains and with WD-40 repeats (see IPR001680 from INTERPRO) in the C-terminal part.
Probab=80.76 E-value=0.37 Score=32.32 Aligned_cols=14 Identities=50% Similarity=0.831 Sum_probs=12.9
Q ss_pred cCCCceEEEeccCC
Q psy8789 350 TSKYPVILSIEDNC 363 (851)
Q Consensus 350 ~s~yP~ils~e~hc 363 (851)
.|.+|=||||||.|
T Consensus 8 ~sahpdILSLeNrC 21 (30)
T PF05386_consen 8 VSAHPDILSLENRC 21 (30)
T ss_pred ccCCcchhhhhhhH
Confidence 57899999999999
No 273
>cd08603 GDPD_SHV3_repeat_1 Glycerophosphodiester phosphodiesterase domain repeat 1 of glycerophosphodiester phosphodiesterase-like protein SHV3 and SHV3-like proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase domain (GDPD) repeat 1 present in glycerophosphodiester phosphodiesterase (GP-GDE)-like protein SHV3 and SHV3-like proteins (SVLs), which may play an important role in cell wall organization. The prototype of this family is a glycosylphosphatidylinositol (GPI) anchored protein SHV3 encoded by shaven3 (shv3) gene from Arabidopsis thaliana. Members in this family show sequence homology to bacterial GP-GDEs (EC 3.1.4.46) that catalyze the hydrolysis of various glycerophosphodiesters, and produce sn-glycerol-3-phosphate (G3P) and the corresponding alcohols. Both, SHV3 and SVLs, have two tandemly repeated GDPD domains whose biochemical functions remain unclear. The residues essential for interactions with the substrates and calcium ions in bacterial GP
Probab=80.43 E-value=2 Score=46.79 Aligned_cols=40 Identities=23% Similarity=0.120 Sum_probs=36.5
Q ss_pred cCCCHHHHHHHHhcCcc--EEEEeeecCCCCCceEeecCCce
Q psy8789 292 SESSCEAYVRCLRQGCR--CIELDCWDGPDGTPIVYHGHTLT 331 (851)
Q Consensus 292 ~~ss~~~y~~~l~~gcR--cveld~wdg~~~~p~v~hg~t~t 331 (851)
-+.+.++|..|+..|+. -||+|++=-.||.|||.|..++.
T Consensus 14 PEnTl~Ay~~Ai~~Ga~~d~IE~DV~lTkDgvlVv~HD~~L~ 55 (299)
T cd08603 14 PDSSLFAYQFAASSSSPDVALWCDLQLTKDGVGICLPDLNLD 55 (299)
T ss_pred CcchHHHHHHHHHcCCCCCEEEEEeeECcCCcEEEeCCcccc
Confidence 37899999999999995 69999999999999999998873
No 274
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=79.79 E-value=3.4 Score=36.82 Aligned_cols=54 Identities=17% Similarity=0.231 Sum_probs=38.5
Q ss_pred CcccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHH
Q psy8789 25 AIAKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYL 97 (851)
Q Consensus 25 ~k~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L 97 (851)
.+..+.|+|..+..+... . ....+|.|+-.+ ++.+|.|+|+++++.|+..|+..
T Consensus 40 ~~p~G~I~L~~~~~~~~~----------~-----~~~~~F~i~t~~----r~y~l~A~s~~e~~~Wi~al~~~ 93 (95)
T cd01265 40 AKPLGRVDLSGAAFTYDP----------R-----EEKGRFEIHSNN----EVIALKASSDKQMNYWLQALQSK 93 (95)
T ss_pred ccccceEECCccEEEcCC----------C-----CCCCEEEEEcCC----cEEEEECCCHHHHHHHHHHHHhh
Confidence 356678888875433111 0 124689987654 57899999999999999999864
No 275
>KOG0199|consensus
Probab=79.73 E-value=1.7 Score=51.34 Aligned_cols=51 Identities=24% Similarity=0.262 Sum_probs=39.3
Q ss_pred EEEEEeecCCCCCCcccCCCCEEEEeEecC-CCeEEEEE--CCceEEEecCCCcc
Q psy8789 787 VKALYDYQARNDDELSFPKHAIISNVTRAE-GGWWRGDY--GGKRMHWFPSNYVA 838 (851)
Q Consensus 787 ~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~-~gWw~g~~--~g~~~G~fP~nyv~ 838 (851)
++|..+|....++.|.|++||.|+|++... +-||.|.. +++. |.||.+-|.
T Consensus 377 ~~a~~~~d~~ep~aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~kv-G~Fprsvvt 430 (1039)
T KOG0199|consen 377 AVARETYDSIEPGALHLTKGDEIVVIEGSGAGYDWFGQNKRNQKV-GTFPRSVVT 430 (1039)
T ss_pred ceeeeeccccCCCceeeccCCeEEEEecCCccceeecccccccee-cccCcceee
Confidence 344445556778889999999999998764 68999963 3455 999998886
No 276
>PTZ00268 glycosylphosphatidylinositol-specific phospholipase C; Provisional
Probab=78.72 E-value=16 Score=40.88 Aligned_cols=102 Identities=15% Similarity=0.231 Sum_probs=64.6
Q ss_pred HHHHhcCccEEEEeeecCC--CCCceEeecCCceeeeehHHHHHHHhhccccc--CCCceEEEeccCC---CHHHHHHHH
Q psy8789 300 VRCLRQGCRCIELDCWDGP--DGTPIVYHGHTLTTKIKFKDVVKTIRDHAFET--SKYPVILSIEDNC---SLPQQRVMA 372 (851)
Q Consensus 300 ~~~l~~gcRcveld~wdg~--~~~p~v~hg~t~t~~i~~~~v~~~i~~~af~~--s~yP~ils~e~hc---~~~~q~~~a 372 (851)
..=|..|+|.+.|=|=-.+ +++-.++||.- .++|.|||+.|+++.=.. ..=-|||.+-..= ....|.+..
T Consensus 91 ~eQL~~GVRYfDIRV~~~~~~~~~~~~~Hgl~---~~~~~dvL~dv~~FL~~h~~p~EvVILd~~hfy~~~~~~h~~~ll 167 (380)
T PTZ00268 91 RAQLDHGVRYLDLRVATNPEDANRLYISHTQI---SVPLADVLEDVKAFLNDPSSANEFIVLDFQHLYLTDDSDGKGKFF 167 (380)
T ss_pred HHHHhCCeEEEEEEecccCCCCCcEEEEecee---ceEHHHHHHHHHHHHhcCCCCCcEEEEEeecccCCCchHHHHHHH
Confidence 3457889999998874332 34456677642 479999999999865332 2345888875322 344555677
Q ss_pred HHHHHHhhcccCCCcCCCCCCCCCChhhhh-----ccccccc
Q psy8789 373 QIMLDIFKDMLLIHPVEKNETVLPSPHQLR-----GKILLKH 409 (851)
Q Consensus 373 ~~~~~~~g~~l~~~~~~~~~~~lpsp~~l~-----~kilik~ 409 (851)
+.|+. |||.++ |.+... . -+.++|- .+|+|-.
T Consensus 168 ~~L~~-~~d~l~--p~~~~~-~-~TL~~LW~~~~~~rVIi~Y 204 (380)
T PTZ00268 168 RELDR-LSDRFI--PVDVPL-T-TPLEILWRVSRRRRIFLVV 204 (380)
T ss_pred HHHHH-hcCeec--CCcccc-c-CcHHHHHhcCCCcEEEEEE
Confidence 77777 999987 333222 2 3778886 4455544
No 277
>smart00287 SH3b Bacterial SH3 domain homologues.
Probab=78.70 E-value=3.1 Score=33.58 Aligned_cols=36 Identities=17% Similarity=0.316 Sum_probs=28.4
Q ss_pred ccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCc
Q psy8789 802 SFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYV 837 (851)
Q Consensus 802 s~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv 837 (851)
.+..|+.+.++...+++|.+-+...+..||+|..++
T Consensus 26 ~l~~g~~v~i~~~~~~~W~~v~~~~g~~Gwi~~~~~ 61 (63)
T smart00287 26 TLKKGDKVKVLGVDGQDWAKITYGSGQRGYVPGYVV 61 (63)
T ss_pred EecCCCEEEEEEccCCceEEEEcCCCCEEEEEeeee
Confidence 467899999998765599999987444499987765
No 278
>KOG3812|consensus
Probab=78.53 E-value=0.81 Score=48.97 Aligned_cols=49 Identities=22% Similarity=0.549 Sum_probs=38.0
Q ss_pred EEEEEEeecCCCCC-------CcccCCCCEEEEeEecCCCeEEEEE--CCceEEEecC
Q psy8789 786 TVKALYDYQARNDD-------ELSFPKHAIISNVTRAEGGWWRGDY--GGKRMHWFPS 834 (851)
Q Consensus 786 ~~~al~dy~~~~~~-------eLs~~~Gd~i~vl~~~~~gWw~g~~--~g~~~G~fP~ 834 (851)
-+++.-+|.+.-.+ .++|...|.|.|-+|-+++||.|++ .|..-|++|+
T Consensus 60 AV~tnv~Y~gslde~~Pv~g~aisF~~kDFlHIkeKynnDWWIGRlVkeg~e~gFiPs 117 (475)
T KOG3812|consen 60 AVRTNVSYDGSLDEDSPVQGHAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPS 117 (475)
T ss_pred EEEeccccCCccCCCCCCCCceeeeccccceeehhhcccchhHHHHhhcCCccccccc
Confidence 35566677764333 5899999999999999999999985 4544599996
No 279
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=78.22 E-value=5.5 Score=36.31 Aligned_cols=37 Identities=27% Similarity=0.431 Sum_probs=31.8
Q ss_pred CCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHh
Q psy8789 60 AARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLV 98 (851)
Q Consensus 60 e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~ 98 (851)
-.|.|-|.|+..- .+|.|+|++++|.+.|+..|.+-+
T Consensus 74 iP~IF~I~~~~~~--~~lllLA~s~~ek~kWV~~L~~~~ 110 (112)
T cd01242 74 IPKIFQILYANEA--RDLLLLAPQTDEQNKWVSRLVKKI 110 (112)
T ss_pred CCeEEEEEeCCcc--ceEEEEeCCchHHHHHHHHHHHhc
Confidence 4599999998753 689999999999999999998654
No 280
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=77.96 E-value=7.3 Score=38.17 Aligned_cols=64 Identities=11% Similarity=0.243 Sum_probs=46.1
Q ss_pred HHHHhHh----cCCCCeeeHHHHHHHHHhcC---CCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhc
Q psy8789 115 RKHFYSL----EGPRETVNLKDIKTFLPRVN---CKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMF 178 (851)
Q Consensus 115 r~~F~~~----D~d~G~Is~~El~~ll~~l~---~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~ 178 (851)
+++|..+ ..+...|+-+.+.++|+..+ -.++...+.-+|..+-..+...|+|++|+.++..+..
T Consensus 2 ~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~lA~ 72 (154)
T PF05517_consen 2 EAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAELAE 72 (154)
T ss_dssp HHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHHHH
Confidence 4455555 23338899999999999754 3578888888898876655667999999999887654
No 281
>PF15409 PH_8: Pleckstrin homology domain
Probab=77.43 E-value=5.2 Score=35.26 Aligned_cols=33 Identities=21% Similarity=0.332 Sum_probs=28.8
Q ss_pred CCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 60 AARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 60 e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
..++|.|.-|+ ...||=|.|+++++.|+..|+.
T Consensus 55 ~~~~I~idsg~----~i~hLKa~s~~~f~~Wv~aL~~ 87 (89)
T PF15409_consen 55 KSRRIDIDSGD----EIWHLKAKSQEDFQRWVSALQK 87 (89)
T ss_pred CCCEEEEEcCC----eEEEEEcCCHHHHHHHHHHHHh
Confidence 56888887776 5789999999999999999985
No 282
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=77.36 E-value=4.9 Score=36.44 Aligned_cols=61 Identities=16% Similarity=0.200 Sum_probs=41.0
Q ss_pred cccCeEEceeehh---hhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHhh
Q psy8789 26 IAKDEVDMREVKE---VRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLVP 99 (851)
Q Consensus 26 k~~~~i~i~~I~e---IR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~~ 99 (851)
...+.|+|..+.. |+.+.... . . -....+|+|+-.. .+..|.|+|+++++.|+..|+..+.
T Consensus 38 ~~~G~I~L~~~~~~~~v~~~~~~~-------~-~-~~~~~~F~i~t~~----Rty~l~a~s~~e~~~Wi~ai~~v~~ 101 (103)
T cd01251 38 FAKGEVFLGSQEDGYEVREGLPPG-------T-Q-GNHWYGVTLVTPE----RKFLFACETEQDRREWIAAFQNVLS 101 (103)
T ss_pred CcCcEEEeeccccceeEeccCCcc-------c-c-ccccceEEEEeCC----eEEEEECCCHHHHHHHHHHHHHHhc
Confidence 4557889887652 44332110 0 0 0012489987764 6889999999999999999998764
No 283
>PF02762 Cbl_N3: CBL proto-oncogene N-terminus, SH2-like domain; InterPro: IPR014742 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the SH2-like domain.; PDB: 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B 3BUW_B ....
Probab=77.29 E-value=6.9 Score=32.98 Aligned_cols=45 Identities=18% Similarity=0.282 Sum_probs=36.9
Q ss_pred CccCCCCCHHHHHHHhcCCC-CCCeEEEeecCCCCCceEEEEEeCC
Q psy8789 661 EWYHPTATRSQAEDLLRRVP-SDGAFLVRPSENDNSSYVISFRAED 705 (851)
Q Consensus 661 ~Wyhg~isR~eAe~lL~~~~-~~G~FLVR~s~~~~~~~~LSv~~~~ 705 (851)
|=|...|+=+|..+.|.... +||+|+.|-|.++-|.++|-++..+
T Consensus 3 pgY~AFlTYdevk~~L~~~~~kpGsYiFRlSCTrLGQWAIGyV~~d 48 (86)
T PF02762_consen 3 PGYMAFLTYDEVKARLQHYRDKPGSYIFRLSCTRLGQWAIGYVTQD 48 (86)
T ss_dssp TTBETT--HHHHHHHHGGGTTSTTEEEEEEESSSTTSEEEEEEETT
T ss_pred CceeEEEeHHHHHHHHHHHhCCcccEEEeeccccccceeEEEEcCC
Confidence 45777899999999998755 7999999999999999999988743
No 284
>KOG0042|consensus
Probab=76.86 E-value=3.6 Score=47.50 Aligned_cols=66 Identities=21% Similarity=0.275 Sum_probs=59.0
Q ss_pred HHHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhc
Q psy8789 113 WLRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMF 178 (851)
Q Consensus 113 wlr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~ 178 (851)
.++..|..+|.|+ |.+++.++.+.|+..|.+++.+.+.+..+++|.+.+|.....||..++..+..
T Consensus 594 ~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~~ 660 (680)
T KOG0042|consen 594 RRKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIKN 660 (680)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHhc
Confidence 3456788999988 99999999999999999999999999999999999999999999999876543
No 285
>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....
Probab=76.46 E-value=1.2 Score=34.20 Aligned_cols=39 Identities=10% Similarity=0.153 Sum_probs=27.2
Q ss_pred cccccccceeEeecCeEEEEcCccchhhhhhhhhhhcC-cccccceeccCC
Q psy8789 431 LAEDKIKHCRIRVEGRLYTIGTTQFESLVELISYYERH-PLYKKIELWYPV 480 (851)
Q Consensus 431 ~~~~~~~~~~ik~~g~~~~~~~~~F~sL~~li~~w~~~-~~~~~~~~~~~~ 480 (851)
-.+++|+ +++|+.+++++.. + ..||.. ...++..|++|+
T Consensus 9 ~~~~eLs---~~~Gd~i~v~~~~------~--~~Ww~~~~~~~~~~G~vP~ 48 (48)
T PF00018_consen 9 EDPDELS---FKKGDIIEVLEKS------D--DGWWKVRNESTGKEGWVPS 48 (48)
T ss_dssp SSTTBSE---B-TTEEEEEEEES------S--SSEEEEEETTTTEEEEEEG
T ss_pred CCCCEEe---EECCCEEEEEEec------C--CCEEEEEECCCCcEEEeeC
Confidence 3455665 4658888888877 6 778877 555678999883
No 286
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=76.25 E-value=7.4 Score=33.31 Aligned_cols=54 Identities=22% Similarity=0.365 Sum_probs=39.2
Q ss_pred CeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 29 DEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 29 ~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
..+++..|. |..+...+ ....+|+|+.... ..+.+.|.|+|.++++.|+..|+.
T Consensus 45 ~~~~l~~~~-v~~~~~~~------------~~~~~F~i~~~~~-~~~~~~~~~~~~~~~~~W~~al~~ 98 (99)
T cd00900 45 GSIPLSEIS-VEEDPDGS------------DDPNCFAIVTKDR-GRRVFVFQADSEEEAQEWVEALQQ 98 (99)
T ss_pred CEEEccceE-EEECCCCC------------CCCceEEEECCCC-CcEEEEEEcCCHHHHHHHHHHHhc
Confidence 357777766 66554432 1347999988742 237899999999999999999864
No 287
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=76.22 E-value=4.3 Score=35.44 Aligned_cols=31 Identities=32% Similarity=0.515 Sum_probs=27.3
Q ss_pred CcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHH
Q psy8789 61 ARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLR 95 (851)
Q Consensus 61 ~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~ 95 (851)
..||+|+..+ +++.|.|+|+++++.|+..|+
T Consensus 62 ~~~f~i~~~~----~~~~f~a~s~~~~~~Wi~al~ 92 (94)
T cd01250 62 RFCFEVISPT----KTWHFQADSEEERDDWISAIQ 92 (94)
T ss_pred ceEEEEEcCC----cEEEEECCCHHHHHHHHHHHh
Confidence 4799998765 789999999999999999986
No 288
>KOG0035|consensus
Probab=75.19 E-value=5.8 Score=48.66 Aligned_cols=91 Identities=10% Similarity=0.047 Sum_probs=63.3
Q ss_pred HHHHHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHH-----HHHHHHhhhcCCCCCCcCHHHHHHHHHhhhc---cccccc
Q psy8789 114 LRKHFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTN-----KLREHFQEVDTRKTNELAFDEFSILYNRIMF---DEQMFT 184 (851)
Q Consensus 114 lr~~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~-----~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~---r~~~~~ 184 (851)
++..|..+|+.. |.++..++.+.|..+|.+...+ +...+..+.|.+..|.++|.+|..++.+-.. +....+
T Consensus 749 lrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~l~~~~r~i 828 (890)
T KOG0035|consen 749 LRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYEDLDTELRAI 828 (890)
T ss_pred HHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhhhhcHHHHHH
Confidence 567777788777 8899999999999999998852 2234555667777799999999998865221 111112
Q ss_pred cccccccCCCCccCHHHHHH
Q psy8789 185 DSYSHYSSDGQTVTASELTN 204 (851)
Q Consensus 185 ~~f~~~~~~~~~lt~~ef~~ 204 (851)
..|..-.....+++++||..
T Consensus 829 ~s~~d~~ktk~~lL~eEL~~ 848 (890)
T KOG0035|consen 829 LAFEDWAKTKAYLLLEELVR 848 (890)
T ss_pred HHHHHHHcchhHHHHHHHHh
Confidence 33433334444799999988
No 289
>KOG4306|consensus
Probab=73.69 E-value=13 Score=40.19 Aligned_cols=85 Identities=22% Similarity=0.287 Sum_probs=56.8
Q ss_pred HHHhcCccEEEEeee---cCCCCCceEeecCCceeeeehHHHHHHHhhcccccCCCceEEEeccCC--CHHHHHHHHHHH
Q psy8789 301 RCLRQGCRCIELDCW---DGPDGTPIVYHGHTLTTKIKFKDVVKTIRDHAFETSKYPVILSIEDNC--SLPQQRVMAQIM 375 (851)
Q Consensus 301 ~~l~~gcRcveld~w---dg~~~~p~v~hg~t~t~~i~~~~v~~~i~~~af~~s~yP~ils~e~hc--~~~~q~~~a~~~ 375 (851)
.=|..|.|.+-|=+= +++|.+=-|+||-+. .++..+|+.-|+++-=.+-.==|||.+-+-= +..--..+..++
T Consensus 74 ~QL~~GvRylDlRi~~~~~~~D~~~~i~HGl~~--~~~v~~vL~ev~~Fl~~h~eEVViL~f~~~fg~~~~~h~~l~~~i 151 (306)
T KOG4306|consen 74 EQLVAGVRYLDLRIGYKLMDPDREFYICHGLFS--TYPVLEVLNEVRQFLSEHPEEVVILEFRHFFGMTEPHHRKLVLVI 151 (306)
T ss_pred HHHhhcceEEEEEeeeccCCCCcceEEEeeccc--cccHHHHHHHHHHHHHhCCCEEEEEeccchhccCccHHHHHHHHH
Confidence 447789999887775 234444479999554 4555899988887543333333444333211 556667788889
Q ss_pred HHHhhcccCCCc
Q psy8789 376 LDIFKDMLLIHP 387 (851)
Q Consensus 376 ~~~~g~~l~~~~ 387 (851)
++.||++|+.++
T Consensus 152 k~~~g~~l~~d~ 163 (306)
T KOG4306|consen 152 KQGFGDILCDDS 163 (306)
T ss_pred HHHhcccccChh
Confidence 999999999543
No 290
>PRK10884 SH3 domain-containing protein; Provisional
Probab=73.57 E-value=4 Score=41.92 Aligned_cols=40 Identities=8% Similarity=0.102 Sum_probs=32.1
Q ss_pred cccCCCCEEEEeEecC-CCeEEEEECCceEEEecCCCcccc
Q psy8789 801 LSFPKHAIISNVTRAE-GGWWRGDYGGKRMHWFPSNYVAEI 840 (851)
Q Consensus 801 Ls~~~Gd~i~vl~~~~-~gWw~g~~~g~~~G~fP~nyv~~i 840 (851)
-++..|+.++|++..+ .||.+-+..++..||+++.|+...
T Consensus 48 ~~l~~G~~v~vl~~~~~~~w~~Vr~~~G~~GWV~~~~Ls~~ 88 (206)
T PRK10884 48 GTLNAGEEVTLLQVNANTNYAQIRDSKGRTAWIPLKQLSTT 88 (206)
T ss_pred EEEcCCCEEEEEEEcCCCCEEEEEeCCCCEEeEEHHHhcCC
Confidence 3567999999998775 689999876555599999998754
No 291
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=71.86 E-value=11 Score=33.92 Aligned_cols=59 Identities=14% Similarity=0.161 Sum_probs=38.3
Q ss_pred ccCcccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 23 PCAIAKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 23 ~~~k~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
+..+..+.|++..+ .|+.-+++. .....||-|+.... .+...+|.+.+|++.|+..|+.
T Consensus 39 ~~~~p~gli~l~~~-~V~~v~ds~-----------~~r~~cFel~~~~~---~~~y~~~a~~~er~~Wi~~l~~ 97 (98)
T cd01245 39 KKTKPIGLIDLSDA-YLYPVHDSL-----------FGRPNCFQIVERAL---PTVYYSCRSSEERDKWIESLQA 97 (98)
T ss_pred CCCCccceeecccc-EEEEccccc-----------cCCCeEEEEecCCC---CeEEEEeCCHHHHHHHHHHHhc
Confidence 33445567777777 676654432 12348999876542 2455666666999999999874
No 292
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=71.17 E-value=7.3 Score=33.70 Aligned_cols=33 Identities=39% Similarity=0.666 Sum_probs=27.8
Q ss_pred CcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 61 ARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 61 ~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
..+|+|...+. +++.|.|.|+++++.|+..|+.
T Consensus 58 ~~~F~i~~~~~---~~~~~~a~s~~e~~~Wi~al~~ 90 (91)
T cd01246 58 DKCFTIDTGGD---KTLHLRANSEEERQRWVDALEL 90 (91)
T ss_pred CcEEEEEcCCC---CEEEEECCCHHHHHHHHHHHHh
Confidence 47999986542 6899999999999999999874
No 293
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=70.38 E-value=13 Score=33.92 Aligned_cols=77 Identities=12% Similarity=0.199 Sum_probs=47.3
Q ss_pred CCCCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHhCcCcchhhhhccccccCcCCc
Q psy8789 192 SDGQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLFSKQNELWDQQYDAIHQDMTKP 271 (851)
Q Consensus 192 ~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~S~~n~~~~~~~~~~~~dm~~p 271 (851)
..++.|+.++.+.||.+-+ +..+.+..|-.-.|.+.+ |.|+++||+--|. ++.-....--.++-..
T Consensus 21 ~~~g~isg~~a~~~f~~S~----L~~~~L~~IW~LaD~~~d-----G~L~~~EF~iAm~-----Li~~~~~~~~~~lP~~ 86 (104)
T PF12763_consen 21 PQDGKISGDQAREFFMKSG----LPRDVLAQIWNLADIDND-----GKLDFEEFAIAMH-----LINRKLNGNGKPLPSS 86 (104)
T ss_dssp SSTTEEEHHHHHHHHHHTT----SSHHHHHHHHHHH-SSSS-----SEEEHHHHHHHHH-----HHHHHHHHTTS---SS
T ss_pred CCCCeEeHHHHHHHHHHcC----CCHHHHHHHHhhhcCCCC-----CcCCHHHHHHHHH-----HHHHHhcCCCCCCchh
Confidence 3456899999999998654 555667777766666655 8999999987553 1111000012355666
Q ss_pred cccccccccCC
Q psy8789 272 LSHYFINSSHN 282 (851)
Q Consensus 272 l~~Y~i~sshn 282 (851)
|..+.|.+|.-
T Consensus 87 LP~~L~p~s~~ 97 (104)
T PF12763_consen 87 LPPSLIPPSKR 97 (104)
T ss_dssp SSGGGSSSCG-
T ss_pred cCHHHCCCCcc
Confidence 77888877753
No 294
>PF02762 Cbl_N3: CBL proto-oncogene N-terminus, SH2-like domain; InterPro: IPR014742 Cbl (Casitas B-lineage lymphoma) is an adaptor protein that functions as a negative regulator of many signalling pathways that start from receptors at the cell surface. The N-terminal region of Cbl contains a Cbl-type phosphotyrosine-binding (Cbl-PTB) domain, which is composed of three evolutionarily conserved domains: an N-terminal four-helix bundle (4H) domain, an EF hand-like calcium-binding domain, and a divergent SH2-like domain. The calcium-bound EF-hand wedges between the 4H and SH2 domains, and roughly determines their relative orientation. The Cbl-PTB domain has also been named Cbl N-terminal (Cbl-N) or tyrosine kinase binding (TKB) domain [, ]. The N-terminal 4H domain contains four long alpha-helices. The C and D helices in this domain pack against the adjacent EF-hand-like domain, and a highly conserved loop connecting the A and B helices contacts the SH2-like domain. The EF-hand motif is similar to classical EF-hand proteins. The SH2-like domain retains the general helix-sheet-helix architecture of the SH2 fold, but lacks the secondary beta-sheet, comprising beta-strands D', E and F, and also a prominent BG loop []. This entry represents the SH2-like domain.; PDB: 3PFV_A 3VGO_A 3PLF_B 2Y1M_A 2CBL_A 3BUX_B 3BUN_B 3BUM_B 3OB1_B 3BUW_B ....
Probab=70.07 E-value=18 Score=30.55 Aligned_cols=45 Identities=22% Similarity=0.356 Sum_probs=36.5
Q ss_pred CccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeC
Q psy8789 502 KWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQ 549 (851)
Q Consensus 502 ~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~ 549 (851)
|-|...|+ =+|..+.|+.. ...+|+|+.|-|.+.-|..++-+...
T Consensus 3 pgY~AFlT--Ydevk~~L~~~-~~kpGsYiFRlSCTrLGQWAIGyV~~ 47 (86)
T PF02762_consen 3 PGYMAFLT--YDEVKARLQHY-RDKPGSYIFRLSCTRLGQWAIGYVTQ 47 (86)
T ss_dssp TTBETT----HHHHHHHHGGG-TTSTTEEEEEEESSSTTSEEEEEEET
T ss_pred CceeEEEe--HHHHHHHHHHH-hCCcccEEEeeccccccceeEEEEcC
Confidence 44666777 89999999987 77899999999999999998877653
No 295
>KOG4666|consensus
Probab=70.06 E-value=7 Score=42.06 Aligned_cols=102 Identities=14% Similarity=0.085 Sum_probs=70.7
Q ss_pred HHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhccccc---cccccccc-cCCCCccCHHHHHHHHHHhcCcCcCCHHHHHH
Q psy8789 147 NKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQM---FTDSYSHY-SSDGQTVTASELTNFLIREQNETNVNEREVSR 222 (851)
Q Consensus 147 ~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~---~~~~f~~~-~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~ 222 (851)
..+..+|.-+|.+++|.++|-|...-..-++..+.. ....|..+ .+.+++++..+|-..|+..-+-. +-++-.
T Consensus 259 d~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lgv~---~l~v~~ 335 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVLGVE---VLRVPV 335 (412)
T ss_pred hhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhcCcc---eeeccc
Confidence 456689999999999999999988777766654322 22445544 45567788888888776654433 334556
Q ss_pred HHHHhccccccccCCCcccHHHHHHHHhCcCcch
Q psy8789 223 HMRDYLQDEQRNVQEPYFTFMEFIDFLFSKQNEL 256 (851)
Q Consensus 223 li~~~d~d~~~~~~~g~ls~deF~~fL~S~~n~~ 256 (851)
++...+...+ |.|++.+|-+|+...-|-+
T Consensus 336 lf~~i~q~d~-----~ki~~~~f~~fa~~~p~~a 364 (412)
T KOG4666|consen 336 LFPSIEQKDD-----PKIYASNFRKFAATEPNLA 364 (412)
T ss_pred cchhhhcccC-----cceeHHHHHHHHHhCchhh
Confidence 6776665433 8899999999987665544
No 296
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=69.95 E-value=10 Score=33.45 Aligned_cols=33 Identities=12% Similarity=0.138 Sum_probs=27.1
Q ss_pred CcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 61 ARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 61 ~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
..+|.|.-+.. ++.+|.|.|+++++.|+..|+.
T Consensus 58 ~~~F~i~~~~~---r~~~L~A~s~~e~~~Wi~al~~ 90 (91)
T cd01247 58 ENRFDISVNEN---VVWYLRAENSQSRLLWMDSVVR 90 (91)
T ss_pred CCEEEEEeCCC---eEEEEEeCCHHHHHHHHHHHhh
Confidence 47788865432 7999999999999999999974
No 297
>cd08621 PI-PLCXDc_like_2 Catalytic domain of uncharacterized hypothetical proteins similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins. This subfamily corresponds to the catalytic domain present in a group of uncharacterized hypothetical proteins found in bacteria and fungi, which are similar to eukaryotic phosphatidylinositol-specific phospholipase C, X domain containing proteins (PI-PLCXD). The typical eukaryotic phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11) has a multidomain organization that consists of a PLC catalytic core domain, and various regulatory domains. The catalytic core domain is assembled from two highly conserved X- and Y-regions split by a divergent linker sequence. In contrast, eukaryotic PI-PLCXDs contain a single TIM-barrel type catalytic domain, X domain, and are more closely related to bacterial PI-PLCs, which participate in Ca2+-independent PI metabolism, hydrolyzing the membrane lipid phosphatidyl
Probab=69.32 E-value=10 Score=41.50 Aligned_cols=91 Identities=19% Similarity=0.247 Sum_probs=59.9
Q ss_pred CCccccccccccCCccc---cCC--------ccccCCCHHHHHHHHhcCccEEEEeeecCCCCCceEeecCCce------
Q psy8789 269 TKPLSHYFINSSHNTYL---TGD--------QFSSESSCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHTLT------ 331 (851)
Q Consensus 269 ~~pl~~Y~i~sshntyl---~~~--------q~~~~ss~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t~t------ 331 (851)
+.||++-.|=-|||+.- .+. ... ..-......=|..|+|.+.|-+--..+|+=.++||.-..
T Consensus 6 ~~~L~~l~iPGTHdS~~~~~~~~~~~~~~~~~~~-~tQ~~~i~~QL~~GiRyfDlRv~~~~~~~~~~~H~~~~~~~~~G~ 84 (300)
T cd08621 6 DRPLRHIVMPGTHDSGMSSLTGGLWPVDGNDSNT-QTQGLSIYDQLRAGARYFDIRPVITHGGELWTGHYNGEDASAQGA 84 (300)
T ss_pred CeEhhhccccccchhccccccCCCcccccccccc-ccCCCCHHHHHhcCCcEEEEEEEEcCCCcEEEEecccccccccCc
Confidence 47999999999999852 211 111 111123445688999999998865445666788875422
Q ss_pred eeeehHHHHHHHhhcccccCCCceEEEec
Q psy8789 332 TKIKFKDVVKTIRDHAFETSKYPVILSIE 360 (851)
Q Consensus 332 ~~i~~~~v~~~i~~~af~~s~yP~ils~e 360 (851)
+..+|.+||+.|+.+.=....=-|||.+-
T Consensus 85 ~~~~l~~vL~~v~~Fl~~~p~EvViL~~~ 113 (300)
T cd08621 85 NGESLDDILDEVNRFTDENPGELVILNFS 113 (300)
T ss_pred CCCcHHHHHHHHHHHHHhCCCcEEEEEEE
Confidence 35899999999998653322223777765
No 298
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=68.15 E-value=7.7 Score=34.38 Aligned_cols=33 Identities=24% Similarity=0.230 Sum_probs=27.0
Q ss_pred CcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 61 ARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 61 ~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
..||+|.... .+++.|.|+|+++++.|+..|+.
T Consensus 63 ~~~F~I~~~~---~~~~~f~a~s~~e~~~Wi~ai~~ 95 (96)
T cd01260 63 KYAFKVCHPV---YKSFYFAAETLDDLSQWVNHLIT 95 (96)
T ss_pred ceEEEECCCC---CcEEEEEeCCHHHHHHHHHHHHh
Confidence 4689997543 26888999999999999999863
No 299
>KOG4065|consensus
Probab=67.84 E-value=11 Score=34.45 Aligned_cols=55 Identities=11% Similarity=0.115 Sum_probs=39.0
Q ss_pred HHhHhcCCC-CeeeHHHHHHHHHhcCC-------C---CCHHHHHHHH----hhhcCCCCCCcCHHHHHH
Q psy8789 117 HFYSLEGPR-ETVNLKDIKTFLPRVNC-------K---MSTNKLREHF----QEVDTRKTNELAFDEFSI 171 (851)
Q Consensus 117 ~F~~~D~d~-G~Is~~El~~ll~~l~~-------~---~s~~~l~~~f----~e~D~~~~g~L~f~EF~~ 171 (851)
-|...|-|+ +.|+=-|+.+.+.-.+- + .++.++..++ +.-|.|++|.|+|-||.+
T Consensus 72 YF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK 141 (144)
T KOG4065|consen 72 YFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLK 141 (144)
T ss_pred hhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHh
Confidence 366667777 89999898888765432 1 2455665544 455788999999999975
No 300
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=66.72 E-value=2.9 Score=38.65 Aligned_cols=60 Identities=13% Similarity=0.129 Sum_probs=37.1
Q ss_pred CCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhccccccccccc--cccCCCCccCHHHHH
Q psy8789 143 KMSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQMFTDSYS--HYSSDGQTVTASELT 203 (851)
Q Consensus 143 ~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~~~~f~--~~~~~~~~lt~~ef~ 203 (851)
..-...+.=+|...|.|++|.|+-.|...+...|... +.-...|+ .+.++++.||..|..
T Consensus 50 ~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l~~~-e~C~~~F~~~CD~n~d~~Is~~EW~ 111 (113)
T PF10591_consen 50 SECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPLMPP-EHCARPFFRSCDVNKDGKISLDEWC 111 (113)
T ss_dssp GGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTTSTT-GGGHHHHHHHH-TT-SSSEEHHHHH
T ss_pred hhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHHhhh-HHHHHHHHHHcCCCCCCCCCHHHHc
Confidence 3345566678999999999999999998887765332 22223344 556677789998864
No 301
>KOG3705|consensus
Probab=66.71 E-value=4.5 Score=44.49 Aligned_cols=55 Identities=18% Similarity=0.193 Sum_probs=44.0
Q ss_pred eEEEEEEeecCCCCCCcccCCCCEEEEeEecCCCeEEEEECC-ceEEEecCCCccc
Q psy8789 785 ITVKALYDYQARNDDELSFPKHAIISNVTRAEGGWWRGDYGG-KRMHWFPSNYVAE 839 (851)
Q Consensus 785 ~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g-~~~G~fP~nyv~~ 839 (851)
-..+++++..++..+|+.++.||+|-|-....+|.-+|.... ...|+||+-=|++
T Consensus 510 Hn~ivi~aH~prt~~ei~l~vGD~vgvAGNHWdGySKG~Nr~t~~~GlfPSyKvre 565 (580)
T KOG3705|consen 510 HNVIVIEAHIPRTNKEIDLKVGDKVGVAGNHWDGYSKGTNRQTYKEGLFPSYKVRE 565 (580)
T ss_pred cceEEEEecCCCcccccCcccCCeeeecccccccccccccccccccCCCccceeee
Confidence 357899999999999999999999999776667777776543 3349999876654
No 302
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=65.93 E-value=12 Score=33.70 Aligned_cols=35 Identities=23% Similarity=0.382 Sum_probs=29.3
Q ss_pred CcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHhh
Q psy8789 61 ARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLVP 99 (851)
Q Consensus 61 ~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~~ 99 (851)
..+|.|.-.. +++.|.|.|+++.+.|+..|+..+.
T Consensus 66 ~~~F~I~~~~----rsf~l~A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 66 PHSFLVSGKQ----RCLELQARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred CceEEEecCC----cEEEEEcCCHHHHHHHHHHHHHHhh
Confidence 5789885544 7999999999999999999987653
No 303
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=64.81 E-value=14 Score=33.35 Aligned_cols=34 Identities=24% Similarity=0.552 Sum_probs=28.3
Q ss_pred CcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHh
Q psy8789 61 ARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLV 98 (851)
Q Consensus 61 ~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~ 98 (851)
..||+|. +. -+++-|.|.|++|.+.|+..|+.-+
T Consensus 64 ~~~F~I~-~~---~ks~~l~A~s~~Ek~~Wi~~i~~aI 97 (99)
T cd01220 64 PHCFTIF-GG---QCAITVAASTRAEKEKWLADLSKAI 97 (99)
T ss_pred ceeEEEE-cC---CeEEEEECCCHHHHHHHHHHHHHHh
Confidence 3799887 33 2789999999999999999998755
No 304
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=63.32 E-value=30 Score=34.28 Aligned_cols=35 Identities=9% Similarity=0.004 Sum_probs=27.1
Q ss_pred HHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHH
Q psy8789 117 HFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLRE 151 (851)
Q Consensus 117 ~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~ 151 (851)
...-+|.|+ |.|...|.-+-+++||+++--+-+..
T Consensus 12 HvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~aa 47 (174)
T PF05042_consen 12 HVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLLAA 47 (174)
T ss_pred hhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHHHH
Confidence 334468888 99999999999999999876554443
No 305
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=61.61 E-value=24 Score=33.01 Aligned_cols=66 Identities=11% Similarity=0.000 Sum_probs=42.8
Q ss_pred cccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 26 IAKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 26 k~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
+..+.|.++.--.|..|....... ..+......-...|+|.-.. .++.|.|.|+.+++.|+..|+.
T Consensus 55 ~~~~vil~D~~f~v~~~~~~~~~~-~~~~~~~~~~~~~~~i~t~~----R~~~l~a~s~~~~~~Wi~~i~~ 120 (121)
T cd01254 55 QILDVILFDVDFKVNGGGKEDISL-AVELKDITGLRHGLKITNSN----RSLKLKCKSSRKLKQWMASIED 120 (121)
T ss_pred ceeeEEEEcCCccEEeCCcccccc-cccccccCCCceEEEEEcCC----cEEEEEeCCHHHHHHHHHHHHh
Confidence 556677787777777776542111 11111122234677774443 6899999999999999999874
No 306
>PRK09071 hypothetical protein; Validated
Probab=58.54 E-value=34 Score=37.87 Aligned_cols=24 Identities=17% Similarity=0.314 Sum_probs=18.1
Q ss_pred CCceEeecC-Cceeee-ehHHHHHHH
Q psy8789 320 GTPIVYHGH-TLTTKI-KFKDVVKTI 343 (851)
Q Consensus 320 ~~p~v~hg~-t~t~~i-~~~~v~~~i 343 (851)
|-||+-||. ..||+. .-.||++++
T Consensus 106 G~~V~kHGnr~~ssk~g~saDvLeaL 131 (323)
T PRK09071 106 GYRVLLHGGGGHTAGRLYTEQLLEAL 131 (323)
T ss_pred CCeEEEECCCCCCCCcccHHHHHHHC
Confidence 889999996 456664 378888876
No 307
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=55.87 E-value=23 Score=33.19 Aligned_cols=25 Identities=16% Similarity=0.433 Sum_probs=22.0
Q ss_pred eEEEEeeCCHHHHHHHHHHHHHHhh
Q psy8789 75 KTLSIAAFSEKECGLWVTGLRYLVP 99 (851)
Q Consensus 75 k~L~LvA~s~ee~~~Wv~gL~~L~~ 99 (851)
.+..|.|.|+++++.|+..|+..+.
T Consensus 90 ~~~~~~A~s~~e~~~Wi~al~~~~~ 114 (125)
T cd01252 90 SVYRISAANDEEMDEWIKSIKASIS 114 (125)
T ss_pred eEEEEECCCHHHHHHHHHHHHHHHh
Confidence 4667999999999999999998775
No 308
>KOG3508|consensus
Probab=55.39 E-value=4.4 Score=49.69 Aligned_cols=55 Identities=24% Similarity=0.390 Sum_probs=43.0
Q ss_pred CCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeC-CeeeEEEEE
Q psy8789 659 DKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAE-DKIKHCRIR 713 (851)
Q Consensus 659 ~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~-~~v~H~~I~ 713 (851)
...||||+..|.-++..+.+....|.++||++...++.+.++..-. +.+.|+++.
T Consensus 80 ~~~~~~~~lrr~i~e~r~r~~e~s~~~wi~e~~~lp~~~~l~~~~~~d~~l~~r~~ 135 (932)
T KOG3508|consen 80 ERKWYMENLRRTIAESRLRRAENSGSYWIREAKRLPGKGKLSCLLQLDGTLYARTI 135 (932)
T ss_pred hhhhhhcchhhhcccchhhccCCceeEEeeccCcCCCcceeehhhccchhHHhhhh
Confidence 4579999999999999987776789999999999899988876431 125555543
No 309
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=53.38 E-value=37 Score=30.48 Aligned_cols=38 Identities=21% Similarity=0.346 Sum_probs=31.2
Q ss_pred CCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHh
Q psy8789 60 AARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLV 98 (851)
Q Consensus 60 e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~ 98 (851)
+.++|.|+...+- -..+.|-|.|.|+.+.|+..|+.++
T Consensus 58 d~~~F~v~~~~~p-~~~~~l~A~s~e~K~~W~~~i~~~i 95 (97)
T cd01222 58 EPLCFRVIPFDDP-KGALQLTARNREEKRIWTQQLKRAM 95 (97)
T ss_pred CCcEEEEEecCCC-ceEEEEEecCHHHHHHHHHHHHHHh
Confidence 4799999776532 2488999999999999999998765
No 310
>smart00743 Agenet Tudor-like domain present in plant sequences. Domain in plant sequences with possible chromatin-associated functions.
Probab=52.43 E-value=18 Score=29.13 Aligned_cols=23 Identities=22% Similarity=0.592 Sum_probs=20.3
Q ss_pred ccCCCCEEEEeEecCCCeEEEEE
Q psy8789 802 SFPKHAIISNVTRAEGGWWRGDY 824 (851)
Q Consensus 802 s~~~Gd~i~vl~~~~~gWw~g~~ 824 (851)
.|++|+.|.+....+++||.|.+
T Consensus 2 ~~~~G~~Ve~~~~~~~~W~~a~V 24 (61)
T smart00743 2 DFKKGDRVEVFSKEEDSWWEAVV 24 (61)
T ss_pred CcCCCCEEEEEECCCCEEEEEEE
Confidence 57899999999888899999975
No 311
>PF06347 SH3_4: Bacterial SH3 domain; InterPro: IPR010466 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This family consists of several hypothetical bacterial proteins of unknown function, but that contain an SH-3 region.
Probab=52.10 E-value=27 Score=27.45 Aligned_cols=35 Identities=14% Similarity=0.451 Sum_probs=26.6
Q ss_pred cccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCc
Q psy8789 801 LSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYV 837 (851)
Q Consensus 801 Ls~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv 837 (851)
..+.+|.++.+++ ..++|.+-+.+|.. ||++.+.+
T Consensus 19 ~~l~~g~~v~v~~-~~~~W~~V~~~g~~-GWv~~~~l 53 (55)
T PF06347_consen 19 ARLEPGVPVRVIE-CRGGWCKVRADGRT-GWVHKSLL 53 (55)
T ss_pred EEECCCCEEEEEE-ccCCeEEEEECCeE-EeEEeeec
Confidence 3556888888884 56799999966665 99998764
No 312
>PRK08136 glycosyl transferase family protein; Provisional
Probab=49.66 E-value=66 Score=35.49 Aligned_cols=25 Identities=20% Similarity=0.574 Sum_probs=20.7
Q ss_pred CCCceEeecC-CceeeeehHHHHHHH
Q psy8789 319 DGTPIVYHGH-TLTTKIKFKDVVKTI 343 (851)
Q Consensus 319 ~~~p~v~hg~-t~t~~i~~~~v~~~i 343 (851)
.|-||+-||. ..+|++.-.||+++.
T Consensus 108 ~G~~V~kHGnr~vssk~gsadvleaL 133 (317)
T PRK08136 108 EGVPVLVHGVSEDPTRVTSAEIFEAL 133 (317)
T ss_pred CCCeEEEECCCCCCCcccHHHHHHHc
Confidence 3889999995 577888889998876
No 313
>COG3103 SH3 domain protein [Signal transduction mechanisms]
Probab=49.03 E-value=24 Score=36.16 Aligned_cols=55 Identities=11% Similarity=0.135 Sum_probs=40.3
Q ss_pred EEEEEeecCCCCCC-----cccCCCCEEEEeEecCC-CeEEEEECCceEEEecCCCccccC
Q psy8789 787 VKALYDYQARNDDE-----LSFPKHAIISNVTRAEG-GWWRGDYGGKRMHWFPSNYVAEIE 841 (851)
Q Consensus 787 ~~al~dy~~~~~~e-----Ls~~~Gd~i~vl~~~~~-gWw~g~~~g~~~G~fP~nyv~~i~ 841 (851)
+.++.-|...++.. =++++|+.++|+..... ||...++..+..||||+.++..-.
T Consensus 29 ~~~~~~~vRsGpg~~y~I~~~i~~Ge~vtvl~~~~~~~~~qI~~~~g~t~wi~~~~lt~e~ 89 (205)
T COG3103 29 SDKLNTNVRSGPGDQYRIVGSIKAGEKVTVLGTDGNTGYYQIRDSSGRTGWILSKNLTSEP 89 (205)
T ss_pred eccceeeeecCCCccceeeeEecCCcEEEEEEEcCcccEEEEEecCCceEEEechhhcccc
Confidence 34445555544442 46789999999998865 999999887767999998876543
No 314
>KOG3667|consensus
Probab=47.38 E-value=27 Score=41.64 Aligned_cols=81 Identities=21% Similarity=0.245 Sum_probs=54.1
Q ss_pred CCCCCccCCCCCHHHHHHHhcCCCCCCeEEEeecCCCCCceEEEEEeCCee-eEEEEEE--cCcEEEeCCccc-CCHHHH
Q psy8789 657 HEDKEWYHPTATRSQAEDLLRRVPSDGAFLVRPSENDNSSYVISFRAEDKI-KHCRIRV--EGRLYTIGTTQF-ESLVEL 732 (851)
Q Consensus 657 ~~~~~Wyhg~isR~eAe~lL~~~~~~G~FLVR~s~~~~~~~~LSv~~~~~v-~H~~I~~--~~~~~~~~~~~F-~sl~eL 732 (851)
+-..-...|.++++.+.++|..++ +|+||+|-|++..|..+++...+.+- .|+-|.. .++........+ ..+.-|
T Consensus 560 Lw~dg~Imgfinkq~~~~ll~~~~-~GtflLrfs~S~~GgiT~~~v~~~~~~~~~~i~P~t~~~ls~~~l~d~i~~e~~L 638 (682)
T KOG3667|consen 560 LWNDGVIMGFINKQQERALLMTKP-DGTFLLRFSASEEGGITIAWVEDQKQNLIMMIMPFTKGDLSATSLADIIRDENPL 638 (682)
T ss_pred HhhcceeeeecchhhhhhhhhcCC-CCCceeeeeccccCceeEEecccccccceeEeccccccccccchhhhhccchhhh
Confidence 334456788999999999999988 99999999998888777777665443 4788875 344443332222 233444
Q ss_pred HHHhhh
Q psy8789 733 ISYYER 738 (851)
Q Consensus 733 V~~y~~ 738 (851)
.-+|..
T Consensus 639 ~~l~p~ 644 (682)
T KOG3667|consen 639 FYLYPD 644 (682)
T ss_pred hhhcCC
Confidence 444444
No 315
>KOG2059|consensus
Probab=46.28 E-value=26 Score=41.71 Aligned_cols=63 Identities=17% Similarity=0.216 Sum_probs=49.0
Q ss_pred cccCcccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHhh
Q psy8789 22 TPCAIAKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLVP 99 (851)
Q Consensus 22 ~~~~k~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~~ 99 (851)
+|..+....|.|++|+.|-.=.. +.+.-..+|+|||.+ .+|.|-|.+-.|++.|.+.|++...
T Consensus 603 sp~~q~~~~Ipl~nI~avEklee-----------~sF~~knv~qVV~~d----rtly~Q~~n~vEandWldaL~kvs~ 665 (800)
T KOG2059|consen 603 SPGKQPIYTIPLSNIRAVEKLEE-----------KSFKMKNVFQVVHTD----RTLYVQAKNCVEANDWLDALRKVSC 665 (800)
T ss_pred CCccCcccceeHHHHHHHHHhhh-----------hccCCCceEEEEecC----cceeEecCCchHHHHHHHHHHHHhc
Confidence 45556667899999988743211 124456899999988 4999999999999999999998775
No 316
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=45.23 E-value=44 Score=30.71 Aligned_cols=33 Identities=15% Similarity=0.319 Sum_probs=25.0
Q ss_pred CCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 60 AARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 60 e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
-.+.|+|.=+. ++|||-|.+.++...|+..|+.
T Consensus 79 ~~~~~~i~T~~----kt~~l~~~t~~d~~~Wi~aL~~ 111 (112)
T PF15413_consen 79 HLKVFSIFTPT----KTFHLRCETREDRYDWIEALQE 111 (112)
T ss_dssp SSEEEEEE-SS-----EEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCcEEECCC----cEEEEEECCHHHHHHHHHHHHh
Confidence 34666663333 8999999999999999999874
No 317
>KOG3866|consensus
Probab=44.91 E-value=46 Score=35.75 Aligned_cols=88 Identities=17% Similarity=0.206 Sum_probs=53.5
Q ss_pred HhHhcCCC-CeeeHHHHHHHHHh----c-CCCCC--------HHHHH---HHHhhhcCCCCCCcCHHHHHHHHHhhhccc
Q psy8789 118 FYSLEGPR-ETVNLKDIKTFLPR----V-NCKMS--------TNKLR---EHFQEVDTRKTNELAFDEFSILYNRIMFDE 180 (851)
Q Consensus 118 F~~~D~d~-G~Is~~El~~ll~~----l-~~~~s--------~~~l~---~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~ 180 (851)
|...|.|+ |.++-.|+..|+.+ + +..-. ++.++ ..++.+|+|.+-.++.+||+.--.+.-..+
T Consensus 250 F~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~kef~~ 329 (442)
T KOG3866|consen 250 FALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDNKEFNP 329 (442)
T ss_pred eeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhhcccCC
Confidence 44567788 99999999888753 2 21111 12222 468899999999999999987643322211
Q ss_pred cccccccccccCCCCccCHHHHHHHHHH
Q psy8789 181 QMFTDSYSHYSSDGQTVTASELTNFLIR 208 (851)
Q Consensus 181 ~~~~~~f~~~~~~~~~lt~~ef~~FL~~ 208 (851)
....+ . .-+.....|-+||+.|=+.
T Consensus 330 p~e~W--E-tl~q~~~yTeEEL~~fE~e 354 (442)
T KOG3866|consen 330 PKEEW--E-TLGQKKVYTEEELQQFERE 354 (442)
T ss_pred cchhh--h-hhcccccccHHHHHHHHHH
Confidence 11111 0 1112345788999988654
No 318
>PRK13914 invasion associated secreted endopeptidase; Provisional
Probab=44.79 E-value=26 Score=40.49 Aligned_cols=39 Identities=15% Similarity=0.375 Sum_probs=32.0
Q ss_pred cccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCccc
Q psy8789 801 LSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAE 839 (851)
Q Consensus 801 Ls~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~ 839 (851)
-++..|+.|.|+...+.||++-+++++..||+-..|+..
T Consensus 103 gsl~~G~~V~Vl~~~~ngW~kI~~~~GktGwV~~~YLs~ 141 (481)
T PRK13914 103 TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTD 141 (481)
T ss_pred eeecCCCEEEEeecccCCeEEEEcCCCCEEEEecccccC
Confidence 467899999998656679999999754459999999875
No 319
>cd01256 PH_dynamin Dynamin pleckstrin homology (PH) domain. Dynamin pleckstrin homology (PH) domain. Dynamin is a GTPase that regulates endocytic vesicle formation. It has an N-terminal GTPase domain, followed by a PH domain, a GTPase effector domain and a C-terminal proline arginine rich domain. Dynamin-like proteins, which are found in metazoa, plants and yeast have the same domain architecture as dynamin, but lack the PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=43.40 E-value=37 Score=30.41 Aligned_cols=34 Identities=18% Similarity=0.326 Sum_probs=26.8
Q ss_pred cEEEEEECCCc----ceeEEEEeeCCHHHHHHHHHHHH
Q psy8789 62 RCFIVLYGSEF----KLKTLSIAAFSEKECGLWVTGLR 95 (851)
Q Consensus 62 ~~ftIiyg~~~----~lk~L~LvA~s~ee~~~Wv~gL~ 95 (851)
.||.+++-++- ..|+|.|.|+|.|+.+-|...+.
T Consensus 65 ~~FeLfnpd~rnvykd~k~lel~~~~~e~vdswkasfl 102 (110)
T cd01256 65 HKFALFYPDGRNVYKDYKQLELGCETLEEVDSWKASFL 102 (110)
T ss_pred cEEEEEcCcccccccchheeeecCCCHHHHHHHHHHHH
Confidence 78887765532 26999999999999999986653
No 320
>PRK07394 hypothetical protein; Provisional
Probab=43.39 E-value=87 Score=34.96 Aligned_cols=24 Identities=29% Similarity=0.670 Sum_probs=18.0
Q ss_pred CCceEeecC-Cceee--eehHHHHHHH
Q psy8789 320 GTPIVYHGH-TLTTK--IKFKDVVKTI 343 (851)
Q Consensus 320 ~~p~v~hg~-t~t~~--i~~~~v~~~i 343 (851)
|-||+-||. ..||+ |+-.||+++.
T Consensus 112 Gv~V~kHGnr~~ssk~GvtsaDvLe~L 138 (342)
T PRK07394 112 GQPVVLHGGDRMPTKYGVPLVELWQGL 138 (342)
T ss_pred CCeEEEECCCCCCCCCCchHHHHHHHC
Confidence 889999996 45666 5577888764
No 321
>KOG3580|consensus
Probab=40.87 E-value=1e+02 Score=36.07 Aligned_cols=134 Identities=16% Similarity=0.289 Sum_probs=77.3
Q ss_pred CCeEEEeecCCCCCceEEEEEeCCeeeEEE--EEE----------cC-cEEEeCCcccCCHH--HHHHHhhhCCCcccee
Q psy8789 682 DGAFLVRPSENDNSSYVISFRAEDKIKHCR--IRV----------EG-RLYTIGTTQFESLV--ELISYYERHPLYKKIE 746 (851)
Q Consensus 682 ~G~FLVR~s~~~~~~~~LSv~~~~~v~H~~--I~~----------~~-~~~~~~~~~F~sl~--eLV~~y~~~~l~~~~~ 746 (851)
|-+-+||-... ...-|.+-.++.|--|. |.. +| ....+++..|.+|. |-|.|.-.-+.++.++
T Consensus 406 P~tk~VrF~KG--dSvGLRLAGGNDVGIFVaGvqegspA~~eGlqEGDQIL~VN~vdF~nl~REeAVlfLL~lPkGEevt 483 (1027)
T KOG3580|consen 406 PNTKMVRFKKG--DSVGLRLAGGNDVGIFVAGVQEGSPAEQEGLQEGDQILKVNTVDFRNLVREEAVLFLLELPKGEEVT 483 (1027)
T ss_pred CCceeEEeecC--CeeeeEeccCCceeEEEeecccCCchhhccccccceeEEeccccchhhhHHHHHHHHhcCCCCcEEe
Confidence 67778887543 22334443444333332 111 22 34456666888774 6777777777776555
Q ss_pred ecCCCcHhHHhhcCCCCCCCCCCCCCCCCCCCCCCCCceEEEEEEeecCCCCCCcccCCCCEEEEeEecC---CCeEEE-
Q psy8789 747 LWYPVSEDLIQRMGLEPDDNTVSGTPGYMDPASFTPASITVKALYDYQARNDDELSFPKHAIISNVTRAE---GGWWRG- 822 (851)
Q Consensus 747 L~~Pv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~dy~~~~~~eLs~~~Gd~i~vl~~~~---~gWw~g- 822 (851)
|..--......++- +. .-+. ..+.+.-|.|+...+..|.|.+||++.+++..- .|-|.+
T Consensus 484 ilaQ~k~Dvyr~iv-~s----~vGD------------SFyIRtHFE~Eke~P~gL~FtrGeVFrvvDTLy~GklG~WLAv 546 (1027)
T KOG3580|consen 484 ILAQSKADVYRDIV-AS----GVGD------------SFYIRTHFECEKETPQGLAFTRGEVFRVVDTLYDGKLGNWLAV 546 (1027)
T ss_pred ehhhhhhHHHHHHH-hc----cCCc------------eeEEeeeeeecCCCCccccccccceeeeeecccCCCCcceEEE
Confidence 53222222222211 00 0012 245788999999999999999999999987542 244555
Q ss_pred EECC----ceEEEecC
Q psy8789 823 DYGG----KRMHWFPS 834 (851)
Q Consensus 823 ~~~g----~~~G~fP~ 834 (851)
+++. ..+|++|.
T Consensus 547 RiG~dlrE~ErGiIPN 562 (1027)
T KOG3580|consen 547 RIGNDLRELERGIIPN 562 (1027)
T ss_pred eecccHHHHhcccCCC
Confidence 4433 23599995
No 322
>KOG1785|consensus
Probab=40.04 E-value=37 Score=37.59 Aligned_cols=46 Identities=17% Similarity=0.271 Sum_probs=39.6
Q ss_pred CCccCCCCCHHHHHHHhcCCC-CCCeEEEeecCCCCCceEEEEEeCC
Q psy8789 660 KEWYHPTATRSQAEDLLRRVP-SDGAFLVRPSENDNSSYVISFRAED 705 (851)
Q Consensus 660 ~~Wyhg~isR~eAe~lL~~~~-~~G~FLVR~s~~~~~~~~LSv~~~~ 705 (851)
.|=|...++=+|..++|.... ++|+|+.|-|.++.|.++|-++..+
T Consensus 256 HPGYmAFLTYDEVk~RLqk~~~KpGSYIFRlSCTRlGQWAIGYVt~d 302 (563)
T KOG1785|consen 256 HPGYMAFLTYDEVKARLQKYIKKPGSYIFRLSCTRLGQWAIGYVTAD 302 (563)
T ss_pred CCceeEEeeHHHHHHHHHHHhcCCCceEEeeccCcccceeEEEEcCC
Confidence 455778889999999998765 7999999999999999999998743
No 323
>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A ....
Probab=38.86 E-value=14 Score=28.45 Aligned_cols=39 Identities=5% Similarity=0.055 Sum_probs=25.9
Q ss_pred cccccccceeEeecCeEEEEcCccchhhhhhhhhhhcCcccccceeccCCc
Q psy8789 431 LAEDKIKHCRIRVEGRLYTIGTTQFESLVELISYYERHPLYKKIELWYPVS 481 (851)
Q Consensus 431 ~~~~~~~~~~ik~~g~~~~~~~~~F~sL~~li~~w~~~~~~~~~~~~~~~~ 481 (851)
-..++++. ++|+.+.++... + ..||.... ++..|++|.+
T Consensus 8 ~~~dELs~---~~Gd~i~v~~~~------~--~~W~~g~~-~g~~G~~P~~ 46 (49)
T PF14604_consen 8 QDPDELSF---KKGDVITVLEKS------D--DGWWYGRN-TGRTGLFPAN 46 (49)
T ss_dssp SSTTB-EB----TTEEEEEEEES------S--TSEEEEEE-TTEEEEEEGG
T ss_pred CCcCEeeE---cCCCEEEEEEeC------C--CCEEEEEE-CCEEEEECHH
Confidence 34566665 557777777654 5 77777643 8999999963
No 324
>KOG4065|consensus
Probab=38.39 E-value=1.2e+02 Score=27.88 Aligned_cols=79 Identities=24% Similarity=0.242 Sum_probs=46.9
Q ss_pred CCCHHHHH-HHHhhhcCCCCCCcCHHHHHHHHHhhhccccccccccccccCCCCccCHHHHHHHHHHhcCcCcCCHHHHH
Q psy8789 143 KMSTNKLR-EHFQEVDTRKTNELAFDEFSILYNRIMFDEQMFTDSYSHYSSDGQTVTASELTNFLIREQNETNVNEREVS 221 (851)
Q Consensus 143 ~~s~~~l~-~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~~~~f~~~~~~~~~lt~~ef~~FL~~~Q~e~~~s~~~~~ 221 (851)
+++.++++ ..|+..|.|+++.|+-=|........-.. .++ + .|-.+..++.+.+
T Consensus 62 ~mtpeqlqfHYF~MHDldknn~lDGiEl~kAiTH~H~~---------h~~-g---------------hep~Pl~sE~Ele 116 (144)
T KOG4065|consen 62 KMTPEQLQFHYFSMHDLDKNNFLDGIELLKAITHTHDA---------HDS-G---------------HEPVPLSSEAELE 116 (144)
T ss_pred hCCHHHHhhhhhhhhccCcCCcchHHHHHHHHHHHhhh---------hhc-C---------------CCCCCCCCHHHHH
Confidence 46667776 67888888888888866655543321110 000 0 1112334556666
Q ss_pred HHHHHhccccccccCCCcccHHHHHH
Q psy8789 222 RHMRDYLQDEQRNVQEPYFTFMEFID 247 (851)
Q Consensus 222 ~li~~~d~d~~~~~~~g~ls~deF~~ 247 (851)
.||.....|.+.+ +.|.|+|-||++
T Consensus 117 ~~iD~vL~DdDfN-~DG~IDYgEflK 141 (144)
T KOG4065|consen 117 RLIDAVLDDDDFN-GDGVIDYGEFLK 141 (144)
T ss_pred HHHHHHhcccccC-CCceeeHHHHHh
Confidence 7777665554432 459999999976
No 325
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=38.37 E-value=59 Score=31.81 Aligned_cols=55 Identities=11% Similarity=0.165 Sum_probs=34.6
Q ss_pred cCCCCccCHHHHHHHHHHhcCc-CcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHh
Q psy8789 191 SSDGQTVTASELTNFLIREQNE-TNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLF 250 (851)
Q Consensus 191 ~~~~~~lt~~ef~~FL~~~Q~e-~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~ 250 (851)
..+...|+...|.+++++.+-- ..++..++.-++.++-.... ..|+|++|...|-
T Consensus 13 ~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~-----~~I~f~~F~~aL~ 68 (154)
T PF05517_consen 13 KKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGA-----RKITFEQFLEALA 68 (154)
T ss_dssp TSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS------SEEEHHHHHHHHH
T ss_pred CCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCC-----cccCHHHHHHHHH
Confidence 3345568888888888876542 23566777777877643222 3588888887774
No 326
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=37.37 E-value=76 Score=28.87 Aligned_cols=38 Identities=24% Similarity=0.342 Sum_probs=30.8
Q ss_pred CcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHhhhhc
Q psy8789 61 ARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLVPDTL 102 (851)
Q Consensus 61 ~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~~~~~ 102 (851)
..+|.|.-.. ++.-+.|.|+++-+.|++.|+.-+...+
T Consensus 65 ~n~f~I~~~~----kSf~v~A~s~~eK~eWl~~i~~ai~~~l 102 (104)
T cd01218 65 RNGWIIKTPT----KSFAVYAATETEKREWMLHINKCVTDLL 102 (104)
T ss_pred cceEEEecCC----eEEEEEcCCHHHHHHHHHHHHHHHHHHh
Confidence 4678876543 7999999999999999999998776543
No 327
>KOG1707|consensus
Probab=37.34 E-value=2.2e+02 Score=33.78 Aligned_cols=69 Identities=14% Similarity=0.215 Sum_probs=45.8
Q ss_pred HHHHHHHHHhHhcCCC-CeeeHHHHHHHHH-hcCCCCCHHHHH---HHHhhhcCCC--CCCcCHHHHHHHHHhhhcc
Q psy8789 110 VERWLRKHFYSLEGPR-ETVNLKDIKTFLP-RVNCKMSTNKLR---EHFQEVDTRK--TNELAFDEFSILYNRIMFD 179 (851)
Q Consensus 110 ~~~wlr~~F~~~D~d~-G~Is~~El~~ll~-~l~~~~s~~~l~---~~f~e~D~~~--~g~L~f~EF~~~~~~l~~r 179 (851)
+..| .++|..-|.|. |.++-.|+..+-+ .+|.+....++. ...++.-.++ +..++.+.|+.+......|
T Consensus 194 v~al-~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lfier 269 (625)
T KOG1707|consen 194 VKAL-KRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLFIER 269 (625)
T ss_pred HHHH-HHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHh
Confidence 3445 45899999999 9999999876643 367777665544 4444443333 5577888888776655443
No 328
>KOG0169|consensus
Probab=36.79 E-value=94 Score=37.71 Aligned_cols=113 Identities=17% Similarity=0.271 Sum_probs=71.3
Q ss_pred eeeHHHHHHHHHhcC---CC-CCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcccccc--ccccc-cccCCCCccCH
Q psy8789 127 TVNLKDIKTFLPRVN---CK-MSTNKLREHFQEVDTRKTNELAFDEFSILYNRIMFDEQMF--TDSYS-HYSSDGQTVTA 199 (851)
Q Consensus 127 ~Is~~El~~ll~~l~---~~-~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r~~~~--~~~f~-~~~~~~~~lt~ 199 (851)
.|-++.+..+..... .. ..+.-+..+|+++|++++|.++|++-..+.+.+...-... ...|. .+....+.+..
T Consensus 112 ~~wV~gl~~l~s~~~~~~~~~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~ 191 (746)
T KOG0169|consen 112 NIWVSGLRKLISRSKSMRQRSRREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEE 191 (746)
T ss_pred HHHhhhHHHHHhccchhhhcchHHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehH
Confidence 455555655554332 11 1233455899999999999999999988877653221100 11122 33445566999
Q ss_pred HHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHh
Q psy8789 200 SELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLF 250 (851)
Q Consensus 200 ~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~ 250 (851)
+++.+|....-.. . ++..++.+|..+ . +.++.++++.||.
T Consensus 192 ~~~~~~~~~~~~r----p-ev~~~f~~~s~~-~-----~~ls~~~L~~Fl~ 231 (746)
T KOG0169|consen 192 EEFVKFRKELTKR----P-EVYFLFVQYSHG-K-----EYLSTDDLLRFLE 231 (746)
T ss_pred HHHHHHHHhhccC----c-hHHHHHHHHhCC-C-----CccCHHHHHHHHH
Confidence 9999998765422 1 577777777543 2 5788888888875
No 329
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=36.75 E-value=91 Score=28.89 Aligned_cols=40 Identities=18% Similarity=0.230 Sum_probs=33.3
Q ss_pred CCcEEEEEECCCc-ceeEEEEeeCCHHHHHHHHHHHHHHhh
Q psy8789 60 AARCFIVLYGSEF-KLKTLSIAAFSEKECGLWVTGLRYLVP 99 (851)
Q Consensus 60 e~~~ftIiyg~~~-~lk~L~LvA~s~ee~~~Wv~gL~~L~~ 99 (851)
+.+.|.|.++..- ..++..|-|.|.++-+.|+.-|+.++.
T Consensus 73 d~~kF~i~~~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il~ 113 (114)
T cd01232 73 DPCRFALWSGDPPISDNRIILKANSQETKQEWVKKIREILQ 113 (114)
T ss_pred CCceEEEEeCCCCCCceEEEEECCCHHHHHHHHHHHHHHhh
Confidence 5799999998743 236788999999999999999998864
No 330
>PRK07259 dihydroorotate dehydrogenase 1B; Reviewed
Probab=36.46 E-value=87 Score=34.11 Aligned_cols=77 Identities=25% Similarity=0.345 Sum_probs=51.0
Q ss_pred ccccCCCHHHHHHHHhc----C-ccEEEEeeecCCCCCceEee-cCCc-eeeeehHHHHHHHhhcccccCCCceEEEecc
Q psy8789 289 QFSSESSCEAYVRCLRQ----G-CRCIELDCWDGPDGTPIVYH-GHTL-TTKIKFKDVVKTIRDHAFETSKYPVILSIED 361 (851)
Q Consensus 289 q~~~~ss~~~y~~~l~~----g-cRcveld~wdg~~~~p~v~h-g~t~-t~~i~~~~v~~~i~~~af~~s~yP~ils~e~ 361 (851)
|+.| ++.+.|.++..+ | +..|||.|. -|-.-| |..+ ...=.+.+++++|++.. ++||++-|-.
T Consensus 97 si~g-~~~~~~~~~a~~~~~aG~~D~iElN~~-----cP~~~~gg~~~~~~~~~~~eiv~~vr~~~----~~pv~vKl~~ 166 (301)
T PRK07259 97 NVAG-STEEEYAEVAEKLSKAPNVDAIELNIS-----CPNVKHGGMAFGTDPELAYEVVKAVKEVV----KVPVIVKLTP 166 (301)
T ss_pred Eecc-CCHHHHHHHHHHHhccCCcCEEEEECC-----CCCCCCCccccccCHHHHHHHHHHHHHhc----CCCEEEEcCC
Confidence 5555 458899887765 8 999999984 222235 3222 22335789999999854 7999998753
Q ss_pred CCCHHHHHHHHHHHHH
Q psy8789 362 NCSLPQQRVMAQIMLD 377 (851)
Q Consensus 362 hc~~~~q~~~a~~~~~ 377 (851)
+.+.-..+|+.+.+
T Consensus 167 --~~~~~~~~a~~l~~ 180 (301)
T PRK07259 167 --NVTDIVEIAKAAEE 180 (301)
T ss_pred --CchhHHHHHHHHHH
Confidence 33444567777665
No 331
>PF11302 DUF3104: Protein of unknown function (DUF3104); InterPro: IPR021453 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=35.89 E-value=40 Score=28.58 Aligned_cols=25 Identities=20% Similarity=0.421 Sum_probs=19.0
Q ss_pred CcccCCCCEEEEeEec------CCCeEEEEE
Q psy8789 800 ELSFPKHAIISNVTRA------EGGWWRGDY 824 (851)
Q Consensus 800 eLs~~~Gd~i~vl~~~------~~gWw~g~~ 824 (851)
-|++++||.+.|-... +..||-|..
T Consensus 3 FL~Vk~Gd~ViV~~~~~~~~~~~~dWWmg~V 33 (75)
T PF11302_consen 3 FLSVKPGDTVIVQDEQEVGQKQDKDWWMGQV 33 (75)
T ss_pred ccccCCCCEEEEecCccccccCCCCcEEEEE
Confidence 4789999999875433 469999974
No 332
>KOG3667|consensus
Probab=33.63 E-value=59 Score=38.90 Aligned_cols=56 Identities=21% Similarity=0.252 Sum_probs=41.2
Q ss_pred CCCCCccCCCCCCCHHHHHHHHhccCCCCCceEEeeecCCCCCcEEEEEEeCCe-eeEEEEe
Q psy8789 498 HFGEKWFHGRLSGGRAEAEDLLRRYSHLGDGTFLVRESETFIGDYSLSFWWQGR-VNHCRIR 558 (851)
Q Consensus 498 ~~~~~WyhG~is~~R~~Ae~lL~~~~~~~~G~FLVR~S~~~~g~y~LSv~~~~~-v~H~~I~ 558 (851)
+...-..-|.++ +..+.++|... ++|+|++|-|++.-|..++......+ ..|+-|.
T Consensus 560 Lw~dg~Imgfin--kq~~~~ll~~~---~~GtflLrfs~S~~GgiT~~~v~~~~~~~~~~i~ 616 (682)
T KOG3667|consen 560 LWNDGVIMGFIN--KQQERALLMTK---PDGTFLLRFSASEEGGITIAWVEDQKQNLIMMIM 616 (682)
T ss_pred Hhhcceeeeecc--hhhhhhhhhcC---CCCCceeeeeccccCceeEEecccccccceeEec
Confidence 344455678888 88888888774 89999999999988887776654333 3477776
No 333
>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional
Probab=32.99 E-value=1.4e+02 Score=35.56 Aligned_cols=24 Identities=29% Similarity=0.641 Sum_probs=18.6
Q ss_pred CCceEeecC-CceeeeehHHHHHHH
Q psy8789 320 GTPIVYHGH-TLTTKIKFKDVVKTI 343 (851)
Q Consensus 320 ~~p~v~hg~-t~t~~i~~~~v~~~i 343 (851)
|-||+-||. ..|++.--.||++++
T Consensus 296 G~~V~kHG~r~~ss~~Gsadvle~l 320 (534)
T PRK14607 296 GVPVAKHGNRAVSSKSGSADVLEAL 320 (534)
T ss_pred CCcEEEECCCCCCCCccHHHHHHHc
Confidence 789999995 467777777887775
No 334
>KOG4578|consensus
Probab=32.85 E-value=28 Score=37.70 Aligned_cols=57 Identities=18% Similarity=0.251 Sum_probs=34.9
Q ss_pred HHhHhcCCC-CeeeHHHHHHHHHhcC-CCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHH
Q psy8789 117 HFYSLEGPR-ETVNLKDIKTFLPRVN-CKMSTNKLREHFQEVDTRKTNELAFDEFSILY 173 (851)
Q Consensus 117 ~F~~~D~d~-G~Is~~El~~ll~~l~-~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~ 173 (851)
-|..+|+|. +.|..+|++.+=+-+- ..-...-.+.+|+-+|.|++..|+++|...-+
T Consensus 338 ~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL 396 (421)
T KOG4578|consen 338 YFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCL 396 (421)
T ss_pred eeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhh
Confidence 477778777 7777777654422221 11122334567777788888888877776543
No 335
>KOG3555|consensus
Probab=31.85 E-value=49 Score=36.14 Aligned_cols=53 Identities=13% Similarity=0.302 Sum_probs=30.3
Q ss_pred HHhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHH
Q psy8789 117 HFYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILY 173 (851)
Q Consensus 117 ~F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~ 173 (851)
+|...|.|. +.|+..||..+ ...-.+.-++..|..+|..++|.|+-.|...-|
T Consensus 255 MFnklD~N~Dl~Ld~sEl~~I----~ldknE~CikpFfnsCD~~kDg~iS~~EWC~CF 308 (434)
T KOG3555|consen 255 MFNKLDTNYDLLLDQSELRAI----ELDKNEACIKPFFNSCDTYKDGSISTNEWCYCF 308 (434)
T ss_pred hhhccccccccccCHHHhhhh----hccCchhHHHHHHhhhcccccCccccchhhhhh
Confidence 456666666 66666665543 223334555566666666666666666665433
No 336
>KOG4384|consensus
Probab=31.42 E-value=31 Score=37.85 Aligned_cols=58 Identities=24% Similarity=0.338 Sum_probs=48.3
Q ss_pred EEEEEEeecC--CCCCCcccCCCCEEEEeEecCCCeEEEEECCceEEEecCCCccccCCCC
Q psy8789 786 TVKALYDYQA--RNDDELSFPKHAIISNVTRAEGGWWRGDYGGKRMHWFPSNYVAEIEPQH 844 (851)
Q Consensus 786 ~~~al~dy~~--~~~~eLs~~~Gd~i~vl~~~~~gWw~g~~~g~~~G~fP~nyv~~i~~~~ 844 (851)
.+++.-+|.+ .+.++|.+++||+|.++++..-|-|.|-++++. |.|+.-||..+..+.
T Consensus 138 ~~~~~t~~tp~p~~~d~lk~~~~~~i~~~~~~~~~~~~g~~~~kv-~~f~~~~v~~~s~e~ 197 (361)
T KOG4384|consen 138 RARVHTDFTPSPYDTDSLKIKKGDIIDIIEKPPMGTWLGLLNNKV-GSFKFIYVDVISEEE 197 (361)
T ss_pred cccccccCCCCcccccchhhcccchhhccccCccccccccccCcc-cccccceeccccccc
Confidence 3455556654 578899999999999999999999999999998 999999998875543
No 337
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=31.31 E-value=1.7e+02 Score=25.67 Aligned_cols=51 Identities=12% Similarity=0.182 Sum_probs=38.5
Q ss_pred CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHHhh
Q psy8789 126 ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYNRI 176 (851)
Q Consensus 126 G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l 176 (851)
..|+.+|+.++.++.|++++.++++.+++-+-.+.-+.++=+|=..+++.+
T Consensus 13 n~iT~~eLlkyskqy~i~it~~QA~~I~~~lr~k~inIfn~~~r~~llkei 63 (85)
T PF11116_consen 13 NNITAKELLKYSKQYNISITKKQAEQIANILRGKNINIFNEQERKKLLKEI 63 (85)
T ss_pred hcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 579999999999999999999999988776655554555555554555544
No 338
>KOG2243|consensus
Probab=30.37 E-value=74 Score=40.58 Aligned_cols=56 Identities=7% Similarity=0.194 Sum_probs=42.9
Q ss_pred HhHhcCCC-CeeeHHHHHHHHHhcCCCCCHHHHHHHHhhhcCCCCCCcCHHHHHHHHH
Q psy8789 118 FYSLEGPR-ETVNLKDIKTFLPRVNCKMSTNKLREHFQEVDTRKTNELAFDEFSILYN 174 (851)
Q Consensus 118 F~~~D~d~-G~Is~~El~~ll~~l~~~~s~~~l~~~f~e~D~~~~g~L~f~EF~~~~~ 174 (851)
|..+|.|+ |.|+.++..+.+..- ...+.+++.-++.-+..|.+..++|++|+.-+.
T Consensus 4063 fkeydpdgkgiiskkdf~kame~~-k~ytqse~dfllscae~dend~~~y~dfv~rfh 4119 (5019)
T KOG2243|consen 4063 FKEYDPDGKGIISKKDFHKAMEGH-KHYTQSEIDFLLSCAEADENDMFDYEDFVDRFH 4119 (5019)
T ss_pred chhcCCCCCccccHHHHHHHHhcc-ccchhHHHHHHHHhhccCccccccHHHHHHHhc
Confidence 66788899 999999999998753 345555666566666677888999999987654
No 339
>PF11422 IBP39: Initiator binding protein 39 kDa; InterPro: IPR024238 Initiator binding protein 39kDa (IBP39) recognises the initiator (Inr), which in Trichomonas vaginalis is solely responsible for transcription start site selection. IBP39 consists of an N-terminal Inr binding domain, a flexible linker, and a C-terminal domain. The C-terminal domain interacts with the RNAP II large subunit C-terminal domain. Binding of IBP39 to Inr recruits RNAP II and initiates transcription []. This entry represents the C-terminal domain.; PDB: 1Q88_A 1Q87_B 1Q89_A.
Probab=29.98 E-value=1.5e+02 Score=29.50 Aligned_cols=86 Identities=14% Similarity=0.258 Sum_probs=47.4
Q ss_pred ccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccccccCCCcccHHHHHHHHh--CcCcchhhhhc------------
Q psy8789 196 TVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQRNVQEPYFTFMEFIDFLF--SKQNELWDQQY------------ 261 (851)
Q Consensus 196 ~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL~--S~~n~~~~~~~------------ 261 (851)
.++.+.|...+.+.=+....+-+.+.++|+......+ ...+|+.+|..||. .+++.++-.-+
T Consensus 36 av~~~~Fi~~aa~~f~q~~q~~~Na~~~I~~il~~k~----~~~iT~~Df~~F~A~FGP~~tim~KI~~lL~~s~~~~~w 111 (181)
T PF11422_consen 36 AVSLDFFIKKAANRFKQPSQSLKNAIQVIQYILTPKN----TNVITIPDFYKFLARFGPEETIMEKIHSLLCSSNNDGQW 111 (181)
T ss_dssp EEEHHHHHHHHHHHHS-TTS-HHHHHHHHHHHS--SS-----SEEEHHHHHHHHHHSSSGGGHHHHHHHHHHHHHTTTS-
T ss_pred eeeHHHHHHHHHHHhccccccccchHHHHHHHHcCCC----CceeeHHHHHHHHHHhCCchhHHHHHHHHHHhhccCCcc
Confidence 3555555544433222222233456666666654332 25788888888864 56655543211
Q ss_pred ---c-ccccCcCCccccccccccCCccc
Q psy8789 262 ---D-AIHQDMTKPLSHYFINSSHNTYL 285 (851)
Q Consensus 262 ---~-~~~~dm~~pl~~Y~i~sshntyl 285 (851)
. ...+.|+.+++-||=+.=||=..
T Consensus 112 l~~~Pd~~~~~~~~i~g~f~~t~~NC~i 139 (181)
T PF11422_consen 112 LYFDPDAEKNFDNSISGYFDNTEPNCFI 139 (181)
T ss_dssp B-SSSSTTTTTCCS-EEEEESSSTTEEE
T ss_pred eeeCchhhcccCcccceeeccCCCceEE
Confidence 1 13567888999999888888543
No 340
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=29.67 E-value=99 Score=27.60 Aligned_cols=33 Identities=21% Similarity=0.271 Sum_probs=26.2
Q ss_pred CcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 61 ARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 61 ~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
..+|.|.... -+.+-|-|+|.++++.|+..|+.
T Consensus 71 ~~~F~l~~~~---~~~~~f~a~s~e~~~~Wi~aL~~ 103 (104)
T cd01253 71 KHVFRLRLPD---GAEFLFQAPDEEEMSSWVRALKS 103 (104)
T ss_pred ceEEEEEecC---CCEEEEECCCHHHHHHHHHHHhc
Confidence 3678887542 26778999999999999999863
No 341
>PF15406 PH_6: Pleckstrin homology domain
Probab=29.58 E-value=1.6e+02 Score=27.05 Aligned_cols=48 Identities=19% Similarity=0.265 Sum_probs=33.5
Q ss_pred ccCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHH
Q psy8789 27 AKDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLR 95 (851)
Q Consensus 27 ~~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~ 95 (851)
..++|.|.|+.||-..... .-.|++ -| +-..|-|.|..|++.|+..|.
T Consensus 63 P~GiinLadase~~~~g~~---------------kF~f~~-~G-----~khtF~A~s~aERD~Wv~~lk 110 (112)
T PF15406_consen 63 PSGIINLADASEPEKDGSN---------------KFHFKI-KG-----HKHTFEAASAAERDNWVAQLK 110 (112)
T ss_pred CcceEehhhccccccCCCc---------------eEEEEe-CC-----ceeeeecCCHHHhccHHHHhh
Confidence 4578999998888655221 233444 23 356688999999999998875
No 342
>cd02810 DHOD_DHPD_FMN Dihydroorotate dehydrogenase (DHOD) and Dihydropyrimidine dehydrogenase (DHPD) FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine nucleotides. DHOD requires FMN as co-factor. DHOD divides into class 1 and class 2 based on their amino acid sequences and cellular location. Members of class 1 are cytosolic enzymes and multimers while class 2 enzymes are membrane associated and monomeric. The class 1 enzymes can be further divided into subtypes 1A and 1B which are homodimers and heterotetrameric proteins, respectively. DHPD catalyzes the first step in pyrimidine degradation: the NADPH-dependent reduction of uracil and thymine to the corresponding 5,6-dihydropyrimidines. DHPD contains two FAD, two FMN and eight [4Fe-4S] clusters, arranged in two electron transfer chains that pass its homodimeric interface twice. Two of
Probab=29.40 E-value=1.6e+02 Score=31.65 Aligned_cols=88 Identities=19% Similarity=0.225 Sum_probs=54.9
Q ss_pred CCccccCCCHHHHHHHH----hcCccEEEEeeecCCCCCceEeecCC-ceeeeehHHHHHHHhhcccccCCCceEEEecc
Q psy8789 287 GDQFSSESSCEAYVRCL----RQGCRCIELDCWDGPDGTPIVYHGHT-LTTKIKFKDVVKTIRDHAFETSKYPVILSIED 361 (851)
Q Consensus 287 ~~q~~~~ss~~~y~~~l----~~gcRcveld~wdg~~~~p~v~hg~t-~t~~i~~~~v~~~i~~~af~~s~yP~ils~e~ 361 (851)
+=|+.|. +.+.|.++. ..||..|||+|- -|-.-.|.. +..+=...+++++|++.. +.||++-+-.
T Consensus 102 i~si~g~-~~~~~~~~a~~~~~~G~d~ielN~~-----cP~~~~~~~~~~~~~~~~eiv~~vr~~~----~~pv~vKl~~ 171 (289)
T cd02810 102 IASVGGS-SKEDYVELARKIERAGAKALELNLS-----CPNVGGGRQLGQDPEAVANLLKAVKAAV----DIPLLVKLSP 171 (289)
T ss_pred EEEeccC-CHHHHHHHHHHHHHhCCCEEEEEcC-----CCCCCCCcccccCHHHHHHHHHHHHHcc----CCCEEEEeCC
Confidence 3355553 455554433 349999999984 232222333 223345678899999743 7999998887
Q ss_pred CCCHHHHHHHHHHHHHHhhcccC
Q psy8789 362 NCSLPQQRVMAQIMLDIFKDMLL 384 (851)
Q Consensus 362 hc~~~~q~~~a~~~~~~~g~~l~ 384 (851)
.-+.+.=..+|+.+.+.=-|.+.
T Consensus 172 ~~~~~~~~~~a~~l~~~Gad~i~ 194 (289)
T cd02810 172 YFDLEDIVELAKAAERAGADGLT 194 (289)
T ss_pred CCCHHHHHHHHHHHHHcCCCEEE
Confidence 77766666788877763224443
No 343
>PF00977 His_biosynth: Histidine biosynthesis protein; InterPro: IPR006062 Histidine is formed by several complex and distinct biochemical reactions catalysed by eight enzymes. Proteins involved in steps 4 and 6 of the histidine biosynthesis pathway are contained in one family. These enzymes are called His6 and His7 in eukaryotes and HisA and HisF in prokaryotes. HisA is a phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (5.3.1.16 from EC), involved in the fourth step of histidine biosynthesis. The bacterial HisF protein is a cyclase which catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate during the sixth step of histidine biosynthesis. The yeast His7 protein is a bifunctional protein which catalyzes an amido-transferase reaction that generates imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide. The latter is the ribonucleotide used for purine biosynthesis. The enzyme also catalyzes the cyclization reaction that produces D-erythro-imidazole glycerol phosphate, and is involved in the fifth and sixth steps in histidine biosynthesis.; GO: 0000105 histidine biosynthetic process; PDB: 2VEP_A 2X30_A 1VZW_A 2WJZ_A 2LLE_A 2A0N_A 1THF_D 1GPW_E 1VH7_A 1KA9_F ....
Probab=29.04 E-value=1e+02 Score=32.12 Aligned_cols=48 Identities=17% Similarity=0.370 Sum_probs=37.5
Q ss_pred EEEEeeecCCCCCceEeecCCceeeeehHHHHHHHhhcccccCCCceEEEeccC
Q psy8789 309 CIELDCWDGPDGTPIVYHGHTLTTKIKFKDVVKTIRDHAFETSKYPVILSIEDN 362 (851)
Q Consensus 309 cveld~wdg~~~~p~v~hg~t~t~~i~~~~v~~~i~~~af~~s~yP~ils~e~h 362 (851)
++-||+.+| -.|+++|+.-.+.+.+.+.++...+..+.. =|+.++..-
T Consensus 125 vvslD~~~g---~~v~~~gw~~~~~~~~~~~~~~~~~~g~~~---ii~tdi~~d 172 (229)
T PF00977_consen 125 VVSLDARDG---YKVATNGWQESSGIDLEEFAKRLEELGAGE---IILTDIDRD 172 (229)
T ss_dssp EEEEEEEET---EEEEETTTTEEEEEEHHHHHHHHHHTT-SE---EEEEETTTT
T ss_pred EEEEEeeec---eEEEecCccccCCcCHHHHHHHHHhcCCcE---EEEeecccc
Confidence 445999986 469999999999999999999999988633 266666543
No 344
>KOG0705|consensus
Probab=28.89 E-value=41 Score=39.19 Aligned_cols=36 Identities=19% Similarity=0.384 Sum_probs=30.6
Q ss_pred CCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHH
Q psy8789 58 VDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRY 96 (851)
Q Consensus 58 ~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~ 96 (851)
..|+-||-||--. ..++||.|.+-||++.||.+++.
T Consensus 442 dEEde~F~IVs~t---gqtWhFeAtt~EERdaWvQai~s 477 (749)
T KOG0705|consen 442 DEEDECFEIVSNT---GQTWHFEATTYEERDAWVQAIQS 477 (749)
T ss_pred ccccceEEEeccc---cchhhhhhcchhhHHHHHHHHHH
Confidence 4577899888754 47899999999999999999974
No 345
>smart00557 IG_FLMN Filamin-type immunoglobulin domains. These form a rod-like structure in the actin-binding cytoskeleton protein, filamin. The C-terminal repeats of filamin bind beta1-integrin (CD29).
Probab=28.85 E-value=74 Score=27.97 Aligned_cols=27 Identities=37% Similarity=0.603 Sum_probs=24.3
Q ss_pred CCCceEEeeecCCCCCcEEEEEEeCCe
Q psy8789 525 LGDGTFLVRESETFIGDYSLSFWWQGR 551 (851)
Q Consensus 525 ~~~G~FLVR~S~~~~g~y~LSv~~~~~ 551 (851)
+.+|+|.|+-.....|.|.|++.++++
T Consensus 53 ~~dGty~v~y~P~~~G~~~i~V~~~g~ 79 (93)
T smart00557 53 NGDGTYTVSYTPTEPGDYTVTVKFGGE 79 (93)
T ss_pred CCCCEEEEEEEeCCCEeEEEEEEECCE
Confidence 478999999999999999999999873
No 346
>KOG4251|consensus
Probab=28.34 E-value=1.2e+02 Score=31.61 Aligned_cols=19 Identities=11% Similarity=0.156 Sum_probs=10.4
Q ss_pred hhcCCCCCCcCHHHHHHHH
Q psy8789 155 EVDTRKTNELAFDEFSILY 173 (851)
Q Consensus 155 e~D~~~~g~L~f~EF~~~~ 173 (851)
.+|.|.+|.++|+|...++
T Consensus 289 lIDsNhDGivTaeELe~y~ 307 (362)
T KOG4251|consen 289 LIDSNHDGIVTAEELEDYV 307 (362)
T ss_pred HhhcCCccceeHHHHHhhc
Confidence 3455556666655555544
No 347
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=28.12 E-value=61 Score=30.20 Aligned_cols=25 Identities=28% Similarity=0.260 Sum_probs=22.3
Q ss_pred eEEEEeeCCHHHHHHHHHHHHHHhh
Q psy8789 75 KTLSIAAFSEKECGLWVTGLRYLVP 99 (851)
Q Consensus 75 k~L~LvA~s~ee~~~Wv~gL~~L~~ 99 (851)
.++.|+|+|+.|.+.|+..|+-|..
T Consensus 96 ~~~~~lA~s~~eK~kWV~aL~~l~~ 120 (122)
T cd01243 96 CSTLMLADTEEEKSKWVGALSELHK 120 (122)
T ss_pred cEEEEEeCCchHHHHHHHHHHHHHh
Confidence 6899999999999999999987753
No 348
>PLN02641 anthranilate phosphoribosyltransferase
Probab=27.34 E-value=1.7e+02 Score=32.66 Aligned_cols=24 Identities=17% Similarity=0.387 Sum_probs=19.8
Q ss_pred CCceEeecC-CceeeeehHHHHHHH
Q psy8789 320 GTPIVYHGH-TLTTKIKFKDVVKTI 343 (851)
Q Consensus 320 ~~p~v~hg~-t~t~~i~~~~v~~~i 343 (851)
|-||+-||. ..||++.-.||++++
T Consensus 103 G~~V~kHGnr~~ss~~GsaDvLeaL 127 (343)
T PLN02641 103 GAKVAKQGNRSSSSACGSADVLEAL 127 (343)
T ss_pred CCeEEEeCCCCCCCccCHHHHHHHc
Confidence 889999995 577787788888775
No 349
>PF15411 PH_10: Pleckstrin homology domain
Probab=27.15 E-value=1.3e+02 Score=27.91 Aligned_cols=53 Identities=13% Similarity=0.286 Sum_probs=36.9
Q ss_pred cCeEEceeehhhhcCCCccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHH
Q psy8789 28 KDEVDMREVKEVRVGKCFKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGL 94 (851)
Q Consensus 28 ~~~i~i~~I~eIR~G~~s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL 94 (851)
.++|.|+.|.+|-.-.. ....+++|-...+-.+.+.+|-+.++|..+.|...|
T Consensus 64 KGrI~i~~i~~v~~~s~--------------~g~~~L~i~w~~d~e~~~F~lrf~nee~l~~W~~~L 116 (116)
T PF15411_consen 64 KGRIYISNITEVSSSSK--------------PGSYSLQISWKGDPELENFTLRFRNEEQLEQWRSAL 116 (116)
T ss_pred eeEEEEEeeeeeeccCC--------------CCceEEEEEEcCCCCCceEEEEeCCHHHHHHHHhhC
Confidence 45788888877754321 134677888743333678888899999999998765
No 350
>KOG1314|consensus
Probab=26.62 E-value=42 Score=36.74 Aligned_cols=48 Identities=25% Similarity=0.466 Sum_probs=33.6
Q ss_pred CCCCCcccCCCCEEEEeEecCCCeEEEE-------ECCc---eEEEecCCC-ccccCCCC
Q psy8789 796 RNDDELSFPKHAIISNVTRAEGGWWRGD-------YGGK---RMHWFPSNY-VAEIEPQH 844 (851)
Q Consensus 796 ~~~~eLs~~~Gd~i~vl~~~~~gWw~g~-------~~g~---~~G~fP~ny-v~~i~~~~ 844 (851)
.++-.|++++||.|.+.... ++|..|+ ..++ .+||||.+. ++..+...
T Consensus 329 ~ddprisL~p~d~i~~tr~~-~~wlyg~~~l~e~~~E~~~rkiRgwfP~~~a~e~~e~~~ 387 (414)
T KOG1314|consen 329 TDDPRISLPPGDGIKATRGF-NHWLYGEEILSEMFNESRERKIRGWFPRNCAVEKCEKDY 387 (414)
T ss_pred CCCcccccCCCcceeeeeee-ecccchhhhhhHHHhhcchhhhccccccccccccccccC
Confidence 44556999999999887644 5898883 2232 359999988 66554433
No 351
>PF10223 DUF2181: Uncharacterized conserved protein (DUF2181); InterPro: IPR019356 This is region of approximately 250 residues with no known function.
Probab=26.18 E-value=1.3e+02 Score=31.79 Aligned_cols=52 Identities=21% Similarity=0.296 Sum_probs=42.7
Q ss_pred CCCHHHHHHHHhcCccEEEEeeecC------CCCCceEeecCCceeeeehHHHHHHHh
Q psy8789 293 ESSCEAYVRCLRQGCRCIELDCWDG------PDGTPIVYHGHTLTTKIKFKDVVKTIR 344 (851)
Q Consensus 293 ~ss~~~y~~~l~~gcRcveld~wdg------~~~~p~v~hg~t~t~~i~~~~v~~~i~ 344 (851)
.-|-.....||....-+||.|+==| .++.||+.|=...+|.++|++.+.+|.
T Consensus 11 vNsk~~L~~aL~~~~~miEaDV~l~~~~~~~~~~~PIMahPP~~~SdltLee~L~~v~ 68 (244)
T PF10223_consen 11 VNSKAELEEALSSDIMMIEADVLLGGLNTGNEDGIPIMAHPPATDSDLTLEEWLDEVL 68 (244)
T ss_pred cCCHHHHHHHhCCCCCEEEEEEEeecccCCCCCCCceeeCCCCCCCcCcHHHHHHHHh
Confidence 3456677788988889999999544 357899999766789999999999998
No 352
>cd08576 GDPD_like_SMaseD_PLD Glycerophosphodiester phosphodiesterase-like domain of spider venom sphingomyelinases D, bacterial phospholipase D, and similar proteins. This subfamily corresponds to the glycerophosphodiester phosphodiesterase-like domain (GDPD-like) present in sphingomyelinases D (SMases D) (sphingomyelin phosphodiesterase D, EC 3.1.4.4) from spider venom, the Corynebacterium pseudotuberculosis Phospholipase D (PLD)-like protein from pathogenic bacteria, and the Ajellomyces capsulatus H143 PLD-like protein from ascomycetes. Spider SMases D and bacterial PLD proteins catalyze the Mg2+-dependent hydrolysis of sphingomyelin producing choline and ceramide 1-phosphate (C1P), which possess a number of biological functions, such as regulating cell proliferation and apoptosis, participating in inflammatory responses, and playing a key role in phagocytosis. In the presence of Mg2+, SMases D can function as lysophospholipase D and hydrolyze lysophosphatidylcholine (LPC) to choline
Probab=25.81 E-value=1.1e+02 Score=32.81 Aligned_cols=52 Identities=21% Similarity=0.248 Sum_probs=37.7
Q ss_pred CHHHHHHHHhcCccEEEEeeecCCCCCc-eEeecCCcee------eeehHHHHHHHhhc
Q psy8789 295 SCEAYVRCLRQGCRCIELDCWDGPDGTP-IVYHGHTLTT------KIKFKDVVKTIRDH 346 (851)
Q Consensus 295 s~~~y~~~l~~gcRcveld~wdg~~~~p-~v~hg~t~t~------~i~~~~v~~~i~~~ 346 (851)
++++.-.+|..|+-.||+|+==-++|.| -.|||-..++ .-.|.+.++.+++.
T Consensus 9 ~~~~v~~~l~~GANaiE~Dv~f~~~~~~~~~~Hg~pcdc~r~c~~~~~f~~~l~~~r~~ 67 (265)
T cd08576 9 DLEGVDDALDHGANAIEIDVTFWSNGTGWWADHDVPCDCFRGCTAREMFDEILDYRRNG 67 (265)
T ss_pred cHHHHHHHHHcCCCceeEEEEEccCCcEEEeeCCCccccccCCcHHHHHHHHHHHHHhc
Confidence 6788899999999999999955456777 4889875544 24455555555554
No 353
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=25.16 E-value=48 Score=31.81 Aligned_cols=78 Identities=12% Similarity=0.221 Sum_probs=33.5
Q ss_pred CCccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhccccc--cccCCCcccHHHHHHHHhCcCcchhhhhccccccCcCCc
Q psy8789 194 GQTVTASELTNFLIREQNETNVNEREVSRHMRDYLQDEQ--RNVQEPYFTFMEFIDFLFSKQNELWDQQYDAIHQDMTKP 271 (851)
Q Consensus 194 ~~~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d~d~~--~~~~~g~ls~deF~~fL~S~~n~~~~~~~~~~~~dm~~p 271 (851)
...||.+||.+ |++.- .-+-..++.++.+|..++. ....++.|+++||-.||-.= ++ . .+.+|..+=
T Consensus 5 ~~~lsp~eF~q-Lq~y~---eys~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~y----Le--~-d~P~~lc~h 73 (138)
T PF14513_consen 5 WVSLSPEEFAQ-LQKYS---EYSTKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTY----LE--V-DLPEDLCQH 73 (138)
T ss_dssp -S-S-HHHHHH-HHHHH---HH----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHH----TT----S--HHHHHH
T ss_pred eeccCHHHHHH-HHHHH---HHHHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHH----Hc--C-CCCHHHHHH
Confidence 34678777765 22211 1122356667777754432 11233689999999998532 11 0 134555555
Q ss_pred cccccccccCC
Q psy8789 272 LSHYFINSSHN 282 (851)
Q Consensus 272 l~~Y~i~sshn 282 (851)
|=-+|.+....
T Consensus 74 LF~sF~~~~~~ 84 (138)
T PF14513_consen 74 LFLSFQKKPPQ 84 (138)
T ss_dssp HHHHS-----T
T ss_pred HHHHHhCcccc
Confidence 55566655433
No 354
>PLN02591 tryptophan synthase
Probab=24.46 E-value=43 Score=35.59 Aligned_cols=84 Identities=18% Similarity=0.256 Sum_probs=50.5
Q ss_pred HHHHHH-hcCccEEEEeeecC---CCCCceEeec--CCceeeeehHHHHHHHhhcccccCCCceEEEeccCCCHHHH---
Q psy8789 298 AYVRCL-RQGCRCIELDCWDG---PDGTPIVYHG--HTLTTKIKFKDVVKTIRDHAFETSKYPVILSIEDNCSLPQQ--- 368 (851)
Q Consensus 298 ~y~~~l-~~gcRcveld~wdg---~~~~p~v~hg--~t~t~~i~~~~v~~~i~~~af~~s~yP~ils~e~hc~~~~q--- 368 (851)
.++++| ..||-.|||.+=-. .|| |+|-.. ..|...++++++++.+++.. ...+-|+||-. -.++-.|
T Consensus 20 ~~~~~l~~~Gad~iElGiPfSDP~aDG-pvIq~a~~rAL~~G~~~~~~~~~~~~~r-~~~~~p~ilm~--Y~N~i~~~G~ 95 (250)
T PLN02591 20 EALRLLDACGADVIELGVPYSDPLADG-PVIQAAATRALEKGTTLDSVISMLKEVA-PQLSCPIVLFT--YYNPILKRGI 95 (250)
T ss_pred HHHHHHHHCCCCEEEECCCCCCCcccC-HHHHHHHHHHHHcCCCHHHHHHHHHHHh-cCCCCCEEEEe--cccHHHHhHH
Confidence 334444 46999999987322 244 666544 34777888999999999877 34677976432 3344344
Q ss_pred HHHHHHHHHHhhcccCC
Q psy8789 369 RVMAQIMLDIFKDMLLI 385 (851)
Q Consensus 369 ~~~a~~~~~~~g~~l~~ 385 (851)
.+..+-+++.=-|-|+.
T Consensus 96 ~~F~~~~~~aGv~Gvii 112 (250)
T PLN02591 96 DKFMATIKEAGVHGLVV 112 (250)
T ss_pred HHHHHHHHHcCCCEEEe
Confidence 34444455533333444
No 355
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=23.51 E-value=1.8e+02 Score=27.76 Aligned_cols=39 Identities=15% Similarity=0.320 Sum_probs=33.3
Q ss_pred CCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHhhh
Q psy8789 60 AARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLVPD 100 (851)
Q Consensus 60 e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~~~ 100 (851)
..+.|.|-++.. -....|-|.|.+..+.|+..|+.|+..
T Consensus 79 d~~kFeiw~~~~--~~~yilqA~t~e~K~~Wv~~I~~iL~~ 117 (133)
T cd01227 79 DTKKFEIWYNAR--EEVYILQAPTPEIKAAWVNEIRKVLTS 117 (133)
T ss_pred CccEEEEEeCCC--CcEEEEEcCCHHHHHHHHHHHHHHHHH
Confidence 368999988763 468889999999999999999998864
No 356
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=23.35 E-value=70 Score=30.70 Aligned_cols=32 Identities=6% Similarity=0.059 Sum_probs=14.9
Q ss_pred ccCHHHHHHHHHHhcCcCcCCHHHHHHHHHHhc
Q psy8789 196 TVTASELTNFLIREQNETNVNEREVSRHMRDYL 228 (851)
Q Consensus 196 ~lt~~ef~~FL~~~Q~e~~~s~~~~~~li~~~d 228 (851)
.|+.+.|+.||+..=... +.++-|+.|+..|-
T Consensus 48 ~Id~egF~~Fm~~yLe~d-~P~~lc~hLF~sF~ 79 (138)
T PF14513_consen 48 PIDYEGFKLFMKTYLEVD-LPEDLCQHLFLSFQ 79 (138)
T ss_dssp EE-HHHHHHHHHHHTT-S---HHHHHHHHHHS-
T ss_pred CcCHHHHHHHHHHHHcCC-CCHHHHHHHHHHHh
Confidence 456666666665543322 44455666665554
No 357
>KOG0046|consensus
Probab=23.20 E-value=1.2e+02 Score=35.15 Aligned_cols=27 Identities=19% Similarity=0.334 Sum_probs=16.4
Q ss_pred HHHHHHHHHhccccccccCCCcccHHHHHHHH
Q psy8789 218 REVSRHMRDYLQDEQRNVQEPYFTFMEFIDFL 249 (851)
Q Consensus 218 ~~~~~li~~~d~d~~~~~~~g~ls~deF~~fL 249 (851)
+++++++.+..+|.+ |.++|++|+...
T Consensus 57 eei~~~l~~~~~~~~-----g~v~fe~f~~~~ 83 (627)
T KOG0046|consen 57 EEIKEILGEVGVDAD-----GRVEFEEFVGIF 83 (627)
T ss_pred HHHHHHHhccCCCcC-----CccCHHHHHHHH
Confidence 445555555555544 677888887743
No 358
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=23.14 E-value=1.4e+02 Score=26.73 Aligned_cols=36 Identities=14% Similarity=0.171 Sum_probs=23.5
Q ss_pred cEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHH
Q psy8789 62 RCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYL 97 (851)
Q Consensus 62 ~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L 97 (851)
.+|.|..-.....-.-.+.|+|+++.+.|+..|+..
T Consensus 66 ~~F~i~~~~~~~~~~r~f~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 66 NTFIIRCLQWTTVIERTFHVESPEEREEWIHAIQTV 101 (102)
T ss_pred ceEEEEeccCCcccCEEEEeCCHHHHHHHHHHHHhh
Confidence 578786322010001156799999999999999864
No 359
>KOG2421|consensus
Probab=22.55 E-value=19 Score=41.17 Aligned_cols=61 Identities=26% Similarity=0.282 Sum_probs=47.1
Q ss_pred cCcCCccccccc--cccCCccccCCccccCC-----------CHHHHHHHHhcCccEEEEeeecCCCCCceEeecCC
Q psy8789 266 QDMTKPLSHYFI--NSSHNTYLTGDQFSSES-----------SCEAYVRCLRQGCRCIELDCWDGPDGTPIVYHGHT 329 (851)
Q Consensus 266 ~dm~~pl~~Y~i--~sshntyl~~~q~~~~s-----------s~~~y~~~l~~gcRcveld~wdg~~~~p~v~hg~t 329 (851)
.||+.++.+||- .-|=|+|.- ..|.| +...+-.|++.|.--+|+|+---+|..|||||+.-
T Consensus 309 ~~l~~~~~~~w~~~~~~l~~g~r---g~g~sy~~~~~~~~ent~~~~~~~~~~~ad~ve~dvqlt~D~~~vvyh~f~ 382 (417)
T KOG2421|consen 309 VDLRPSLINYWKKNGLSLNTGHR---GNGTSYTVLSQVLRENTIVIVDNVLELGADLVEMDVQLTKDLVPVVYHDFV 382 (417)
T ss_pred eecChHHhhhhcccchhhhccCC---cCCchhhhhhhhhccceeeeehhHHHhhhhHHHhhcccccCCceeeeccce
Confidence 899999999998 445555543 34433 23344578999999999999999999999999964
No 360
>PF11478 Tachystatin_B: Antimicrobial chitin binding protein tachystatin B; InterPro: IPR020957 Tachystatin B is an antimicrobial chitin binding peptide and consists of two isotopes B1 and B2. Both structures contain a short antiparallel beta sheet with an inhibitory cysteine knot motif. Tyr(14) and Arg(17) are thought to be the essential residues for chitin binding []. ; PDB: 2DCW_A 2DCV_A.
Probab=22.33 E-value=31 Score=24.35 Aligned_cols=12 Identities=50% Similarity=1.259 Sum_probs=4.7
Q ss_pred HHHHHhcCccEE
Q psy8789 299 YVRCLRQGCRCI 310 (851)
Q Consensus 299 y~~~l~~gcRcv 310 (851)
||.+|-+|+||-
T Consensus 1 yitclfrgarcr 12 (42)
T PF11478_consen 1 YITCLFRGARCR 12 (42)
T ss_dssp ----B-TT-EEE
T ss_pred CeEEEeccceEE
Confidence 678888888884
No 361
>PTZ00466 actin-like protein; Provisional
Probab=21.70 E-value=98 Score=35.07 Aligned_cols=49 Identities=16% Similarity=0.279 Sum_probs=40.3
Q ss_pred eehHHHHHHHhhcccc-----cCCCceEEEeccCCCHHHHHHHHHHHHHHhhcc
Q psy8789 334 IKFKDVVKTIRDHAFE-----TSKYPVILSIEDNCSLPQQRVMAQIMLDIFKDM 382 (851)
Q Consensus 334 i~~~~v~~~i~~~af~-----~s~yP~ils~e~hc~~~~q~~~a~~~~~~~g~~ 382 (851)
|.=.|.++.|=+|+|. .+++||+|+--.+++..++++|+++|=|.|+-.
T Consensus 83 v~dwd~~e~iw~~~f~~l~v~~~~~pvllte~~~~~~~~re~~~e~lFE~~~~p 136 (380)
T PTZ00466 83 IENWNDMENIWIHVYNSMKINSEEHPVLLTEAPLNPQKNKEKIAEVFFETFNVP 136 (380)
T ss_pred ECCHHHHHHHHHHHHhhcccCCccCeEEEecCccccHHHHHHHHHHHhccCCCC
Confidence 4447788888888873 368999999778888899999999999999853
No 362
>PF07753 DUF1609: Protein of unknown function (DUF1609); InterPro: IPR011667 This region is found in a number of hypothetical proteins thought to be expressed by the eukaryote Encephalitozoon cuniculi, an obligate intracellular microsporidial parasite. The proteins are approximately 200 residues long.
Probab=21.29 E-value=71 Score=32.29 Aligned_cols=41 Identities=27% Similarity=0.454 Sum_probs=26.9
Q ss_pred CCccccCCCHHHHH--HHHhcCcc----EEEEeeecCCCCCceEeec
Q psy8789 287 GDQFSSESSCEAYV--RCLRQGCR----CIELDCWDGPDGTPIVYHG 327 (851)
Q Consensus 287 ~~q~~~~ss~~~y~--~~l~~gcR----cveld~wdg~~~~p~v~hg 327 (851)
|.-.+|-|+-..-+ -+|..|-+ .||+-.+.+.+|.|||||=
T Consensus 103 g~y~KgGs~R~rmVaigvLE~gg~K~~GvVEVG~Fkd~~g~~VvYHL 149 (230)
T PF07753_consen 103 GKYMKGGSERWRMVAIGVLEEGGEKKVGVVEVGLFKDKGGCPVVYHL 149 (230)
T ss_pred hhhccCcchhheeeEEEEeecCCceeeeeEEEEEeecCCCCeeEEEE
Confidence 44445555544322 23444333 7999999999999999993
No 363
>cd08627 PI-PLCc_gamma1 Catalytic domain of metazoan phosphoinositide-specific phospholipase C-gamma1. This subfamily corresponds to the catalytic domain present in metazoan phosphoinositide-specific phospholipase C (PI-PLC, EC 3.1.4.11)-gamma isozyme 1. PI-PLC is a signaling enzyme that hydrolyzes the membrane phospholipids phosphatidylinositol-4,5-bisphosphate (PIP2) to generate two important second messengers in eukaryotic signal transduction cascades, Inositol 1,4,5-trisphosphate (InsP3) and diacylglycerol (DAG). InsP3 triggers inflow of calcium from intracellular stores, while DAG, together with calcium, activates protein kinase C, which goes on to phosphorylate other molecules, leading to altered cellular activity. Calcium is required for the catalysis. PI-PLC-gamma represents a class of mammalian PI-PLC that has an N-terminal pleckstrin homology (PH) domain, an array of EF hands, a PLC catalytic core domain, and a C2 domain. The PLC catalytic core domain is a TIM barrel with tw
Probab=21.24 E-value=41 Score=35.04 Aligned_cols=17 Identities=53% Similarity=0.722 Sum_probs=14.8
Q ss_pred ccccceeeccccCCCCC
Q psy8789 2 KLRGKILLKHKKLPEGS 18 (851)
Q Consensus 2 ~~~~~~~~~~~~~~~~~ 18 (851)
.||||||+|.||+++++
T Consensus 136 ~Lk~KIlik~K~~~~~~ 152 (229)
T cd08627 136 QLKRKILIKHKKLYRDM 152 (229)
T ss_pred HhCcCEEEecccccccc
Confidence 48999999999998754
No 364
>KOG3723|consensus
Probab=21.13 E-value=55 Score=38.08 Aligned_cols=57 Identities=23% Similarity=0.409 Sum_probs=41.6
Q ss_pred eEEceeehhhh-cCCC--ccccccCcccccCCCCCcEEEEEECCCcceeEEEEeeCCHHHHHHHHHHHHHHhhhhc
Q psy8789 30 EVDMREVKEVR-VGKC--FKDFDRWPEESGRVDAARCFIVLYGSEFKLKTLSIAAFSEKECGLWVTGLRYLVPDTL 102 (851)
Q Consensus 30 ~i~i~~I~eIR-~G~~--s~~f~~~~~~~~~~~e~~~ftIiyg~~~~lk~L~LvA~s~ee~~~Wv~gL~~L~~~~~ 102 (851)
.||+++||.|| .|+. .|.. ...|-|+-.+ +|+-|=|.++.-|..|+..|+-.+.+..
T Consensus 781 ~IDl~~IRSVk~v~~kr~~rsl------------pKAFEIFTAD----~T~ILKaKDeKNAEEWlqCL~IavAHa~ 840 (851)
T KOG3723|consen 781 PIDLSKIRSVKAVAKKRRDRSL------------PKAFEIFTAD----KTYILKAKDEKNAEEWLQCLNIAVAHAK 840 (851)
T ss_pred CccHHHhhhHHHHHhhhhhccc------------chhhheeecC----ceEEeecccccCHHHHHHHHHHHHHHHH
Confidence 49999999999 6642 2211 2444454443 6788899999999999999998887653
No 365
>PF12738 PTCB-BRCT: twin BRCT domain; PDB: 3PA6_A 3KTF_C 2WT8_C 3EF1_A 3EF0_A.
Probab=20.95 E-value=77 Score=25.43 Aligned_cols=29 Identities=17% Similarity=0.217 Sum_probs=21.2
Q ss_pred ccCCccccCCccccCCCHHHHHHHHhcCccEEE
Q psy8789 279 SSHNTYLTGDQFSSESSCEAYVRCLRQGCRCIE 311 (851)
Q Consensus 279 sshntyl~~~q~~~~ss~~~y~~~l~~gcRcve 311 (851)
++++|+|.. +....+-|..|...|+.+|-
T Consensus 32 t~~~THLI~----~~~~~~K~~~A~~~gi~vV~ 60 (63)
T PF12738_consen 32 TKKTTHLIC----SSPEGKKYRKAKEWGIPVVS 60 (63)
T ss_dssp STT-SEEEE----ES--HHHHHHHHHCTSEEEE
T ss_pred cCCceEEEE----eCCCcHHHHHHHHCCCcEEC
Confidence 348899977 56677899999999988874
No 366
>KOG4347|consensus
Probab=20.38 E-value=1.1e+02 Score=36.63 Aligned_cols=33 Identities=18% Similarity=0.151 Sum_probs=19.6
Q ss_pred HHHHHHHhhhcCCCCCCcCHHHHHHHHHhhhcc
Q psy8789 147 NKLREHFQEVDTRKTNELAFDEFSILYNRIMFD 179 (851)
Q Consensus 147 ~~l~~~f~e~D~~~~g~L~f~EF~~~~~~l~~r 179 (851)
.-+..+|...|.+.+|.|+|.+|+.-...++.+
T Consensus 555 ~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~ 587 (671)
T KOG4347|consen 555 IFLERLFRLLDDSMTGLLTFKDLVSGLSILKAG 587 (671)
T ss_pred HHHHHHHHhcccCCcceeEHHHHHHHHHHHHhh
Confidence 344466666666666666666666655555443
Done!